##maf version=1 scoring=roast.v3.3 a score=200.000000 s hg38.chr7_KI270899v1_alt 238 2 + 190869 cc s gorGor5.CYUI01000093v1 9012 2 - 2320194 CC i gorGor5.CYUI01000093v1 N 0 C 0 a score=403936.000000 s hg38.chr7_KI270899v1_alt 240 2017 + 190869 cAACATTCAA-AAGCTGAGCAGGGCTTTAAAGCTATCTTATTAATAAT--TATTTCTGTA-TTG-CGAACTTCA---GCATACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTG-CTCAAGTGAGTACT---GCTTTTTCCTCTG-CCT-TGCTTCATTACTT-TTTAGTTT-CCTTCATTTGAATCATCATTGTAA-GTCTCC--CCTTCTC----CTCAAA---TAACTTTCAAATTGCTGCCAAGAACTACGTTCTATCTTAAGGCTTTTGAGAAAAAA-CTTTCAATGAAGA--TAGCCGCCTAAAGTTATACAAATATAGAAGAAACGGG--ATAAAATAAAGCTTAG-ATTG--GAAA-AAATATTTAAGATTCTACAAAATTCAC-GCGTAAACAAGGGAAGCTGAGTAATTGTATGTT-CAAAT-ACTTTTAA--CAAGTGCAAAACATGTA------GGCTT-AAagaaa---tagag-ctggccaggcatggtggtt-----------cacgcctgtaattccaacagtttgggaggccaaggcaggcagataact-tgaggtcaggaattcgag-accagcctggccaaca-gagtgaa-accc-tctctcta----ctaaaaatacaaaaattaggccaggagtgatggctcacgcctgtga-tcc-cagcactttgagaggccgaggcgggtagatcacctgaggtcaggagtttgagaccagcctaac-caacatagggaa-accccgtctctacta----aaactacaac-attagccgggtgtg---gtggcacatgcctgtaatcc--cagctactcgggaggctgaggcaggagaatcccttgaa-cccaaaaggcaaagattgtggtgagccgagatt-gtgccattgca-ctccagcctgggcaaaaacagcgaaactccgtctcaaaaaaaaaaaaaagaaaaaattagccaggcatggtg---------------------------------------------------------------------aagttgcag----tgagc-tgagactgcaccattgcac-tcca-gcctgggtagcagagcaagacc--ctgtctcaaaaaaaaaaaaaaaaaaagagaga---gagagaaagaaagaaagagGGCTACATTATTTAT-GAAACA--GATA---CTGTTAACTCAGTCACCAGAAAGCCTGTGT-ATAAA--TGAGCAGTGAGATATTCAAGCA-CAGCACACACACACTTCT-CAG-GACAGCTGTCGTGAGTGTTCCATGCTCGTTTCCTT-CTGGATACATCAGCAACTCACTCTGCTATGA-TCCTG-CAATACATCTCA-TGTTAGAATTAGAGACATCTGggccaggcacagtggct-gacgcctgtaatc--ctaac--actttg--ggaagcc-gagg---caggcagat-cacctaa---ggtca---ggagttc----gagaccagcctggccaacatggtgaaatgctgt--ctc------------taccaaaaatacaaaaaattagctgggcatggtggcgcgcgc---ctgtaatcccagctactcgggagcctgaggcaggagaatcgcttgaaccc----gggaggt-ggaggttg-cagtgagccgagatcgtgccactgcactccagcatgggggacggagcaaggctctgtcaaaaaaaaaaaa----------------cagaaaaagaaaaagaaa-----aaAGAATTAGAG-ACATCTGG--ATCAAA-TCAGCTGCCAGTCTCGCAAAGTGTCGGGTAACATCC-TATTA----AG---CTTGCTGCTTACACATCATCTATAAAATACTGAAAATATCATTTTAAGAAATCtttttttt-attttgagacagagttttg-ctcgttg-cccaggc-tg-gagtgcaatggtgcgatctcagctcactgcaa-tctctgccccctgggtt-caa-gcaattctccttc-ct-cag-cctcctgagta-gctgggattacaggcatgca-ccaccac----gcctggctaattttgtattttcagttg-agacagggttt-ctccatattggtcaggctggtctcgaa-ctc-ctgacctc-aggtgatccactgaccttggcctcccaaagtgctgggatt--------acaggtgtgagccacca-tgcctagccAAGAAACCCTTATTTTAAAACAAgccaggcgcggt-ggctcatgcctat-aatcccagcactttgggaag-c s panTro5.chr17 1287 2278 + 83181570 CAACATTCAATAAGCTG-GCAGGGCTTTAAAGCTAT-TTATTAATAATATTATTTCTGTAATTGACGAACTTCATTGCCATACTTTTTTCTCGTT-CATTTGAAATGTTACTCTTTTGG-ATGTGGCTCAAGTGAGTACTCCTGCTTTCACCTCTGTCCTCTGCTTCATTACTAATTTAGTTTGCCTTCATTTGAGTCATCATTGTAAAGTCTCCTGCCTTCTCAATCTTCAAAAATCAACTTTCAAATTGCTGCCAAGA--CATGTTCTATCTTAAGGCTTTTGAGAAAAAAACTTTCAATGAAGAAATAGCCTCCTAAA-TTACACAAATATAGAAGAAACGGGGGATAAAATAAAGCTTAGCATTGAAGAAATAAATATTTAAGATTATACAAAATTCACAGCGTGAAACAAGGAAGCTGAGTAATTGTATGTTTCAAATTACTTTTTAATCAAGTGCAAAACA-GTACATTAGGGCTTTAAAGAAAAATCAGAGTCTggccaggcatggtggttaatagttctggcacagctgtaattccaacagtttgggaggccgaggcaggcagataactatgaggtcaggaattcgaggaccagcctggccaacaagagtgaacacccatctctcttatttctaaaaatacaaaaattagccagcgagtgatggctcatgcctgtgagtccgcagcactttgagaggccgaggcgggtagctcacctgaggt-aggagtttgagacgcagctaacgcaacatagggaacaccccgtctctactactaaaaactacaaccattagccgcgcgtgctggtgggacatgcctgtaatccggcagctactcgggaggctgaggcaggaccacaccttgaagcccaaaaggcaaagattgtggtgagccacgatttgtgc-attgcagctccagcctgggcaaaa-cagcgaaactccgtctcaaaaaaaaaaa---gaaaaaatta-ccaggcgtggtgcggcatgcctgtatatccagctacttgggaggctgaggcaggagaatcgcttgaaaacccaggaggctgaagttggggagggtgagcatgagactgc-ccattgcacctccaagcctgggtagcagagca-gaccaactgttcaacaaaaaaaaaaaaaaaGAGAGAGGATTGAGAGAAAGAAAGAAGAGGCGCTACATTATTTATAGAAATAATGATATCCCTGTTAACTCAGTCACCAGAAAGCCTGTGTCATAAACCTGAGCAGTGAGATATCAAGGCAGCAGCACACACACACTTCTGCAGCGACAGCTGTC-TGAGAGTTCCATGCTTTTTACCTTTCTTGGAACATCAGCAACTCACTCTGCTATGAATCCTATCAATATATCTCAATGTTAGA------GACATCTGggccaggcacagtggctcgacgcctgtaattaactaaacaactttgagggaagcccgaggacacggtcagattcacctaaaaaggtcaaatggagttcctcgaagaccagcctggccaacatggtgaaatgttgtaactcatattacgggcatagaacatacacaaaaaattagctgg-catggtggcgcgcgcttactgta-tcccagctactcgggagcctgaggcaggagaatcgcttgaaccgtccggggaggttggaggttggcagtgagccgagatcatgccactgcactccagcatgggggacagagcaaggctctgtcaaaaaaaaaaaaaaaaaaaaaaaaaaaacagaaaaagaaaaaGAAA----TAAAGAATTAGAGGATATCTGGCCATAAAAATCAGCTGCCAGTCTCGCAAAGTGTCGGGTAACATCCGTATTATAAGAGATTTTTGCTGCTTACACATCATCTATAAAATACTGAAAATATCATTTTAAGAAATCtttttttttattttgagacagagttttggctcattggcccaggcatgtgagtgcgatggtgtgatctcagctcactgcaaatctctgccccctgggttgcaatgcaattctccttcgctgcaggcctgctgagtaagcttgggatacagg-atgcagccagcgcagccgcctggctaattttgtattttcagttatagacagggttttctccatattggtcaggctggtctcgaagctcgctgacctccaggtgatccactgacct-ggcctccccaaa-gctgggatttttaggcaatagatgtgagccaccAATGCCT-GCCAAGAAACCCTTATTTTAAA-CAAGGCCAgcgcggttggctcatgcctattaatcccag-actttggaaaggc i panTro5.chr17 N 0 C 0 s gorGor5.CYUI01000093v1 9014 2093 - 2320194 CAACATTCAA-AAGCTGAGCAGGGCTTTAAAGCTATCTTATTAATAAT--TATTTCTGTA-TTG-CGAACTTCA---GCATACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTG-CTCAAGTGAGTACT---GCTTTTTCCTCTG-CCT-TGCTTCATTACTT-TTTAGTTT-CCTTCATTTGAATCATCATTGTAA-GTCTCC--CCTTCTC----CTCAAA---TAACTTTCAAATTGCTGCCAAGAACTATGTTCTATCTTAAGGCTTTTGAGAAAAAA-CTTTCAATGAAGA--TAGCCGCCTAAAGTTATACAAATATAGAAGAAACGGG--ATAAAATAAAGCTTAG-ATTG--GAAA-AAATATTTAAGATTATACAAAATTCAC-GCGTAAACAAGGGAAGCTGAGTAATTGTATGTT-CAAAT-ACTTTTAA--CAAGTGCAAAACATGTA------GGCTT-AAAGAAA---TAGAG-CTggccaggcatggtggtt-----------cacgcctgtaattccaacagtttgggaggccgaggcaggcagataact-tgaggtcaggaattcgag-accagcctggccaaca-gagtgaa-accc-tctctcta----ctaaaaatacaaaaattaggccaggagtgatggctcatgcctgtga-tcc-cagcactttgagaggccgaggcgggtagatcacctgaggtcaggagtttgagaccagcctaac-caacatagggaa-a-cccgtctctacta----aaactacaac-attagccgggtgtg---gtggcacatgcctgtaatcc--cagctactcgggaggctgaggcaggagaatcccttgaa-cccaaaaggcaaagattgtggtgagccgagatt-gtgccattgca-ctccagcctgggcaaaaacagcgaaactccgtctcaaaaaaaaaaa-aagaaaaaattagccaggcgtggtggcgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttg--aacccaggaggctgaagttgcgg----tgagc-tgagactgcaccattgcac-tcca-gcctgggtagcagagcaagacc--ctgtctc---aaaaaaaaaaaaaaaagagaga---gagagaaaGAAAGAAAGAGGGCTACATTATTTAT-GAAACA--GATA---CTGTTAACTCAGTCACCAGAAAGCCTGTGT-ATAAA--TGAGCAGTGAGATATTCAAGCA-CAGCACACACACACTTCT-CAG-GACAGCTGTCGTGAGAGTTCCATGCTCGTTTCCTT-CTGGATACATCAGCAACTCACTCTGCTATGA-TCCTG-CAATACATCTCA-TGTTAGAATTAGAGACATCTGggccaggcacagtggct-gacgcctgtaatc--ctaac--actttg--ggaagcc-gagg---caggcagat-cacctaa---ggtca---ggagttc----gagaccagcctggccaacatggtgaaatgctgt--ctc------------taccaaaaatacaaaaaattagctgggcatggtggcacgcgc---ctgtaatcccagctactcgggagcctgaggcaggagaatcgcttgaaccc----gggaggt-ggaggttg-cagtgagccgagatcgtgccactgcactccagcat-ggggacggagcaaggctctgtcaaaaaaaaaaaa------aaaaaaaaaacagaaaaagaaaaagaaaagaaaaaagaaTTAGAG-ACATCTGG--ATCAAA-TCAGCTGCCAGTCTCGCAAAGTGTCGGGTAACATCC-TATTA----AG---ATTGCTGCTTACACATCATCTATAAAATACTGAAAATATCATTTTAAGAAATCtttttttt-attttgagacagagttttg-ctcgttg-cccaggc-tg-gagtgcaatggtgcgatctcagctcactgcaa-tctctgccccctgggtt-caa-gcaattctccttc-ct-cag-cctcctgagta-gctgggattacaggcatgca-ccaccac----gcctggctaattttgtattttcagttg-agacagggttt-ctccatattggtcaggctggtctcgaa-ctc-ctgacctc-aggtgatccactgaccttggcctcccaaagtgctgggatt--------acaggtgtgagccacca-tgcctagccAAGAAACCCTTATTTTAAAACAAgccaggcgcggt-ggctcatgcctat-aatcccagcactttgggaag-c i gorGor5.CYUI01000093v1 C 0 C 0 a score=362301.000000 s hg38.chr7_KI270899v1_alt 2257 826 + 190869 caaggcaggtggatcacttgac---gtcagtagtt-tgagac-cagcccaggcaacatgttgtaaccccatctctacta--aaaatatattttaaaaa--ttagctgggcatgttggtgggcacc----tgtaatcccagcttctcaggaggctgaggca-ggagaaccacttgaacctgggaggtg-ga-ggttgcagtgagcggagatcacgcca-ctgca-ctctagcctgggtgacaatagaaagact-ccatctc-aaaaacaaaacaaaacaaaacaaaaca---aaaAACCACTAAAAAAAAGACTCCATTTcaaaaacaaaactaaaaccaa--aaacacaacacaaaTGTAGTACACAAATGAAAATAATTACTGTGTTAAACACAGTTTCATAGAAAATAAAAGACCAATCAA--ATacaataagctgcctttttagatgggtatgttattcttctttcacagctaaag--aaacaggctcagagaatgtta--tttgattggaccGTGTTGCATTTCT-GGACAGTGCAGCTGAGATCAGACTTTGCGTGTAA----CTCCACTAGCCTAC-CAGGGTG--CCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTC-TATGTTCATCAAGGGAAACCTTAAGGGAAAGTGAAAA--TGCTTCTAGAAGGCGACT-GGACACCAGCGCCTTTGCTTGTTGCCTTTGGGCT-CTTCTT-CTAAGGCCAACAGTGA-CCTGAAATTATTGACTGGCTTTTCCAATCAAGTGGACAAAATGGTACCAAGGTCACCAACATCGATGTAG-AACATT s panTro5.chr17 3565 838 + 83181570 caaggccgggtgatcatttgagccagtcagtagttatgagacgcagcct-ggcaa-atgttt--accccatctctactaggaaaatatattttaaacaacttagctgggcatggtggtggccatcaagctgtaatcccagcttctcaggaggctgaggcatggagaacc-cttgaacctgggaggtgtgatggttgcagtgagcggagat-acgccaactgcagctcta-cctgggtgacaatagaaagacttccatctc-aaaactaaaacaaa------caacaaa---aaaaGCCACTAAAAAAAAGACGCCATTTCAaaaacaaaactaaaaccaaccaaac-caacacaaaTGTAGTACA---ATGAAAATAATAACTGTGTTAAACACAGTTTCATAGAAAT--AAAGACCAATCAACAATACAATAA-CTGGCTTTTTAGATGGGT-TGTATTTCTTCTTTCAAAGCTAAAGTAAAACAG-CTCAGAGAATGTTAATTTTAAGTTGACCGTGTCGCATTTCTTGGACAGTGCATGCGAGATCAGACTTTGTGTGTAAAAGACTCCA-TAGCCTACGCAGGATGAGCCTCTCATA--GGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCGACTGGTCAAT-CTACATACAGTACTTCCTATGTTCATCAAGGGAAACT---AGGCAAAGTGAAAAATTGCTTCTAGAAGGCGACTCGGAAACCAGCGCCTTTGTTTGTTGCCTTTGGGCTGCTTCTTTCTAAGGCCAACAGTGAGCCTGAAATTATTGACTG-CTTTTCCAATCAAGTGGACAAAATGGTACCAAG-TCGCCAACATCGATGTAGCAACATC i panTro5.chr17 C 0 C 0 s panPan2.chr14 0 827 - 107357366 caaggcgggtggatcacttgac---gtcagtagtt-tgagac-cagcctgggcaacatgttgtaaccccatctctacta--aaaatatattttaaaaa--ttagctgggcatggtggtgggcacc----tgtaatcccagcttctcaggaggctgaggca-ggagaaccacttgaacctgggaggtg-ga-ggttgcagtgagcggagatcacgcca-ctgca-ctctagcctgggtgacaatagaaagatt-ccatctcaaaaaacaaaacaaaacaaaacaaaacaaacaaaaACCACT-AAAAAAAGACTCCATTTcaaaaacaaaactaaaaccaa--aaacacaacacaaaTGTAGTACACAAATGAAAATAATTACTGTGTTAAACACAGTTTCATAGAAAATAAAAGACCAATCAA--ATACAATAAGCTGCCTTTTTAGATGGGTATGTTATTCTTC-TTCACAGCTAAAG---AACAGGCTCAGAGAATGTTA--TTTGATTGGACCGTGTTGCATTTCT-GGACAGTGCAGCTGAGATCAGACTTTGTGTGTAA----CTCTACTAGCCTAC-CAGGGTG--CCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTC-TATGTTCATCAAGGGAAACCTTAAGGGAAAGTGAAAA--TGCTTCTAGAAGGCGACT-GGACATCAGCGCCTTTGCTTGCTGCCTTTGGGCT-CTTCTT-CTAAGGCCAACAGTGA-CCTGAAATTATTGACTGGCTTTTCCAATCAAGTGGACAAAATGGTACCAAGGTCGCCAACATCGATGTAG-AACATC i panPan2.chr14 N 0 C 0 s gorGor5.CYUI01000093v1 11107 817 - 2320194 caaggcgggtggatcacttgac---gtcagtagtt-tgagac-cagcctgggcaacatgttgtaaccccatctctacta--aaaatatatttaaaaaa--ttagctgggcatggtggtgggcacc----tgtaatcccagcttctcaggaggctgaggca-ggagaaccacttgaacctgggaggtg-ga-ggttgcagtgagcggagatcacgcca-ctgca-ctctagcctgggtgacaatagaaagact-ccatctc-aaaaacaaaacaaaacaa------------aaaaaCCACTAAAAAAAAGACTCCATTTcaaaaacaaaactaaaaccaa--aaacacaacacaaaTGTAGTACACAAATGAAAATAATTACTGTGTTAAACACAGTTTCATAGAAAATAAAAGACCAATCAA--ATacaataagctgcctttttagatgggtatgttattcttctttcacagctaaag--aaacaggctcagagaatgtta--tttgattggaccGTGTTGCATTTCT-GGACAGTGCAGCTGAGATCAGACTTTGTGTGTAA----CTCCACTAGCCTAC-CAGGGTG--CCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTC-TATGTTCATCAAGGGAAACCTTAAGGGAAAGTGAAAA--TGCTTCTAGAAGGCGACT-GGACACGAGCGCCTTTGCTTGTTGCCTTTGGGCT-CTTCTT-CTAAGGCCAACAGTGA-CCTGAAATTATTGACTGGCTTTTCCAATCAAGTGGACAAAATGGTACCAAGGTCGCCAACATCGATGTAG-AACATC i gorGor5.CYUI01000093v1 C 0 C 0 a score=1832720.000000 s hg38.chr7_KI270899v1_alt 3083 2417 + 190869 GATGTTCTACAACATTGCTTAACGCAAGGGGA--GACGCTCCTGACTCAGAGTGTTTAA-TTGCTCACCTACTTCTTT-TTCTGCCCTCTTGGGCTTCTGAAATGAAAAGAACCCTGGGGTGATACAGTGAGTCAAAGGGGTG-CCAGCCGCATCACAGCAAAA-TAGATTCCTAAAAAATCCCTGGCCT-AAGATGACAGCCTT-GGCTGGATCAGTTTGAATGTG-CTGATAGTGGACATGGTAGAATGAAGGTGGTT-GAAATGTTCATATTAAAGAACTTCCACCCAGATTGCAAGAAAAGAGAGAAGAATGGAGACGGCAG-CA-CGAGCCCCTACAATAAAAGCAGATGTTTT-GA-GATCAGTTATATTTCTTCTGACAAAAATTAAAGACAGAAACCAAAGTTTAGCCTGAGACTACAATTAATTGGGCAATAAGCCAGAGGCACATATGGCATAAGACAGATTTAAACATTTCTCCCTGATATTAATACAAACACTAAAATTACAAATACT-TTGATTCC--AAATAAAACAAATATTT-AAAAAATTTAATGAATAAACACTGGGGTCTACAGTAGTATTTGAA---GATCTCACAAACAGGTTTG-GTTTTTGAAGGTTAGAACTGGTGGTCTAGAGA-AT-TCATTTCATTCCAGAGAAAGAAAGAGAGGAATTTCTTGGGTTCCTTCAGGAATGCGTCTAGCTTTGCCTCATCTTTGTTTGAACTATGGATACGGCAGAAGAAAACATGAGGATTTCACAGATTTAAGGTGCAAAAAGTCAC-TGGGTTCTCTAAGAAGTCTGGGATTCTTCTGCTGGAAAAATAAGTTTGTTGAGAAAAAATGAGTTGGA-GGAGGCTGTTATTGAAGTGAAGCAGAATTGTTTTTACTAGTCTGCTTATTACCCACTCTGTA-GTGTGGAAACAAATTATTCATGCACAAG-GTCCTCTTACTGTT-CCTAGAATGCAGTGGAAAGAGAACAGATTAGTTTTCCTCCCTCAGAACACAACCCCTAGAAACATCCTACCT--CAGATGAGATATTGCC-TAATTATTTTCAAAAGACAGTGAAAC--ATC-ATGGATGTAAA-TG-TTTGCTACAAAATAAATACATGCTAGA-AACAGAAGCATCTGGGTCA--CAGCTATATTAGAGCT--ACCTGTGTTCCCCTGTCACTGACATTAAAACAAAAATGTC-CAATACAATCATTCAC-AGCGTGGGAGAGGGGAAGTTGAAGGATGGAAAGGCCAGGCATAAAAGGATTTCAGAATTTCCGTCCATAAGGAAGTGGCTTTGTGCACTGTCTGTTACTGCGTGCAAGGTGAAATTTGAAGAATGAAAAC-GTGCAGTAACAAGGGC-TCCTTTGTCCAACTCACCTCTCCAG-ATACCAA-CTTTCAGACATGTTGCATTTT-AATTGAAAGGTTGATATAATTTTTTTTAAAG--AACACTT-GCGGTGTTTGAAGTGA-CAAAGGCT-GCTGTGACAAAAAAGCAGGGAAAGGGAATTTTTTTT------TAAAAGCAaacaacaacaacagaaaccccacagaaaagcaaacaacaaacaaacaaaaaacaGAGGAAGTAGTC-GAACACCCTGGGCTGT-GACTACTTCCAGGAAGGGGCTAC-AAGAGGCAGTTGGAAATTCTATTTGTTTT--GCAACTGTGGGTTTTCCGGCCTGCTTCCTTTCTAAAGCATATT-ACTCTGCTTTTGGTTCATGAAGTTATCCATTTCTGTTTTCTGGAA-CAGctatgtattttctttat-------------------cta-tcat-ctatctatctatttaccatctatcttttctacctttc-GCTATCAAGA-GCTTGGGTCAAGCAGGATAGAATTC-CAGTGTA-TGTTCACTCTA-CCATTTAAAACAA-GAGCTCTTGTA-GGCATTCTC--CATCACATCATAAACCTGA-GCTTTCTAAAAcagggtgtggcaaactaccatgcatgg-accatgtctgac-acagtct-gcatttgtaagtaaagttg-taatgggacacagccaatacatgtgttaca-taatgtct-ctggctacttt--catggtataatggaagagctgagtca-ttgagagagagaccatatggcttggaa-aacttaaaatatttaacat-ttagccccctgcagaaaatacttgctgactcttgTTTT-AAAAGAT-CTCTGTT-TAGAAT-GCTA-CCTATTGCGTTCTGGATAGAATCACAACTC-TTTACCACAATCGACACAGCTTCAgccctgcttctatatccagcctc-atctatttctgctcctcctccttattttccttctggccatgctgatggattgtcagcttcccagatgtgcaagaatctctcctcccttcc-caacatt-ctcatg-ctctccctctgcct-ctgaa-gaacttc-ctgcc--ccatctctcatgacaaatcctttctacattctttaagatgcagcccctttgctccttcct s panTro5.chr17 4403 2446 + 83181570 GATGTTCTACAACATTGCTTAACGCAAGGGGAATGACGCTCCTGACTCAGAGTGTTTAAATTGCTCACCTACTTCTTT---CTGCC-TCTTGGGCTTCTGAAATGAAAAGAACC-TGGGGTGATACAGTGAGTCAAAGGGGTGGCCAGCCGCATCACAGCAAAAATAGATTCCTAAAA--TCCCTGGCCTTAAGATGACAGCCTTTGGCTGGATCAGTTTGAATGTGGCTGATAGTGGACATG-TAGA-TGAAGGTGGTTTGAAATGTTCATATTAAAGAACTTTCCACCAGATTGCAAGAAA-GAGACAGGAATGGAGATGGCAGGCAGCGAAGCCCTACAT--AAAGCAGATGTTTTTGATGATCAGTTATATTTCTTCTGAACAAAATTAAAGACAGAAACCAAAGTTTAGCCTGAGACTACAATTAAT--GGCAATAAGCCAGAGGCACA-ATGGCA-ATAACAGATTTAAACCTTCTCCGCTGATATTAATACAAACACTAAAATTACAAATACCATGGATTTCGCAAATAAAACAAATATTTTAAAAAATTTAATGAATAAACACTGGGGTCTACAGTAGTATTTGAAAGGGATCTCACAAACAGGTTTGCGTTTTTGAAG-TTAGAACTGGTGGTCTAGAGAGATGTCATTTCATTCCAGAGAA-GAAAGAGAGGAATT-CTTGG-TTCCTTCAGGAATGCGTCTACTTTGGCCTCATCTTTGTT-GAACTATG-ATACGGCAGAAGAAAACATGAGGATTTCACAGATTTACGGTGCAAAAAGTCACCTGGGTTCTCTAAGAAGTCTGGGATTCTTCTGGCTGAAAAATAAGTTTGTTGAGAAAAA-TGAGTTGGACGGAGGCTGTTAT-GAAGTGAAGCAGAATTGTTTTTACTAATCTGCTTAATACCCACTCTGTAAGTGTG-AAACAAATTATTCATGCACAAGAGTCCTCGTACTGTTTCCTAGAATGCAGTG-AAAGAGAACAGATTAGTTT-CCTCCCTCAGAACACAACC--TAGAAACAATCTACCTGTCAGATGAGATATTGCCGTAATTATTTTCAAA-GACAGTGAAAGCAATCGATGGATGTAAAATGCTTTGCTGCAAAATAAATACATGCTAGATAACAGAA-CATCTGG-TCAGACAGCTATATTAGAGCGTAATCTGTGTTCCCCTGTCACTGACATTAAAACAAAAATGTCGCAATACAATCATTCACGAGCATGAGAG---GGAAGTTAAAGGATGGAAAGGCCAGGCATAAAAGGATTTCAGAATTTCCATCCATAAGGAAGTGGCTTTGTGCACT-TCTGTTACTGCGTGCAAGG-GAAATTTGAAGAATGAAAACGGTGCAGTAACAAGGGCTTCCTTTGTCCAA-TCA-CTCTCCAGAATAGCAAGTTTTCAGACATGTTGCATTTTAAATTTGAAGGTTG--ATAAATTTTTTTAAAG--AA-ACTTGGCGGTTGTTG-AGTGAGCAAAGGCTGGCTGTGACAAAAAGCAAGGGAAAGGGAATTTTTTTT---TAATAAAGGCAaacaacaacaacaaaacccccacagaaaagc-aacaacaaacaaacaaaaaacaGA-GAAGAAGT--GAATA-CCTGGGCTGTGGGCTACTTCCAG--AAGGGCTACTAAGAGGCAGTTGGAAATTCTATTTGTTTTTGGCAACTGTGCGTTTCGCGGCCTGCTTCCTTTCTAAAGTATATTAACTCTGATTTTGGTTCGTGAAGTTATCCAATCTGTTTTTCTGGAAGCAGCTA-GTATTTTCTTTAT------------------CCTATTCATACTA--TGCTTATTTACCATCTATCTTTCTCACCTTTCGGCTATCAAGAGGCTTGGGCAAAGCAGGATAGAATTCGCAGTGTATTGTTCACTCTAGCCATTTAAAACAAGGAGCTCTTGTAGGGCATTCTCGGCATCACATCATAAATCTGAGGCTTTCT-AAAcagggtgtggcaaactaccatgcatgacgctatgtctgacaacagtctggcgtttgt-agtaaagttgaaaatgggacacagccaata-atgtgttacattaatgtctcctggctacttttccat-gtataatggaagagctgagtcatttgagagagagaccatatggcttggaacaacttaaaa-attt-acatattag-cccctgcagaaaata-ttgctgactcttgTTTT-AAAAGATACTCTGTTGTAGAATGGCTAGCCTATTGCGTTCTGGA-AGAATCAGAACTCTTTTACCACAATCGACACAGCTTCAG-CCTGCTTCTATAT-CAGCCTCAATCTATTTCTGCTCCTCCTCCTTATTT--CCTCTGGCCATGCTGATGGATTGTCAGCTTCCCAGATGTGCGAGAATCTCTCCTCCCTTCCACAACATTACTCATGCCTCTCCCTCTGCCTGCTCAAGGAACTTCTCTGCCCGCCATCTCTCATGACAAATCCTTT-TACATTCTATAAGATGCA--CCCTTTG--CCTTCCT i panTro5.chr17 C 0 I 30 s panPan2.chr14 827 2421 - 107357366 GATGTTCTACAACATTGCTTAACGCAAGGGGA--GACGCTCCTGACTCAGAGTGTTTAA-TTGCTCACCTACTTCTTTTTTCTGCCCTCTTGGGCTTCTGAAATGAAAAGAACCCTGGGGTGATACAGTGAGTCAAAGGGGTG-CCAGCCGCATCACAGCAAAA-TAGATTCCTAAAAAATCCCTGGCCT-AAGATGACAGCCTT-GGCTGGATCAGTTTGAATGTG-CTGATAGTGGACATGGTAGAATGAAGGTGGTT-GAAATGTTCATATTAAAGAACTTCCACCCAGATTGCAAGAAAAGAGAGAGGAATGGAGATGGCAG-CA-CGAGCCCCCACAATAAAAGCAGATGTTTT-GA-GATCAGTTATATTTCTTCTGACAAAAATTAAAGACAGAAACCAAAGTTTAGCCTGAGACTACAATTAATTGGGCAATAAGCCAGAGGCACATATGGCA-TAGACAGATTTAAACATTTCTCCCTGATATTAATACAAACACTAAAATTACAAATACA-TGGATTCC--AAATAAAACAAATATTT-AAAAAATTTAATGAATAAACACTGGGGTCTACAGTAGTATTTGAAGGAGATCTCACAAACAGGTTTG-GTTTTTGAAGGTTAGAACTGGTGGTCTAGAGA-AT-TCATTTCATTCCAGAGAAAGAAAGAGAGGAATTTCTTGGGTTCCTTCAGGAATGCGTCTAGCTTTGCCTCATCTTTGTTTGAACTATGGATACAGCAGAAGAAAACATGAGGATTTCACAGATTTAAGGTGCAAAAAGTCAC-TGGGTTCTCTAAGAAGTCTGGGATTCTTCTGCTGGAAAAATAAGTTTGTTGAGAAAAAATGAGTTGGA-GGAGGCTGTTATTGAAGTGAAGCAGAATTG-TTTTACTAATCTGCTTATTACCCACTCTGTA-GTGTGGAAACAAATTATTCATGCACAAG-GTCCTCTTACTGTT-CCTAGAATGCAGTGGAAAGAGAACAGATTAGTTTTCCTCCCTCAGAACACAACCCCTAGAAACATCCTACCT--CAGATGAGATATTGCC-TAATTATTTTCAAAAGACAGTGAAAC--ATC-ATGGATGTAAA-TG-TTTGCTGCAAAATAAATACATGCTAGA-AACAGAAGCATCTGGGTCA--CAGCTACATTAGAGCT--ACCTGTGTTCCCCTGTCACTGACATTAAAACAAAAATGTC-CAATACAATCATTCAC-AGCATGGGAGAGGGGAAGTTGAAGGATGGAAAGGCCAGGCATAAAAGGATTTCAGAATTTCCGTCCATAAGGAAGTGGCTTTGTGCACTGTCTGTTACTGCGTGCAAGGTGAAATTTGAAGAATGAAAAC-GTGCAGTAACAAGGGC-TCCTTTGTCCAACTCACCTCTCCAG-ATACCAA-GTTTCAGACATGTTGCATTTT-AATTGAAAGGTTGATATAA-TTTTTTTAAAG--AACACTT-GCGGTGTTTGAAGTGA-CAAAGGCT-GCTGTGACAAAAAAGCAGGGAAAGGGAATTTTTTTT-----AAAAAAGCAAACAACAACAACAAAAACCCCACAGAAAAGCAAACAACAAACAAACAAAAAACAGAGGAAGAAGCC-GAACACCCTGGGCTGT-GACTACTTCCAGGAAGGGGCTAC-AAGAGGCAGTTGGAAATTCTATTTGCTTT--GCAACTGTGGGTTTTCCGGCCTGCTTCCTTTCTAAAGTATATT-ACTCTGCTTTTGGTTCATGAAGTTATCCATTTCTGTTTTCTGGAA-CAGctatgtattttctttat-------------------cta-tcat-ctatctatctatttaccatctatcttttctacctttc-GCTATCAAGA-GCTTGGGTCAAGCAGGATAGAATTC-CAGTGTA-TGTTCACTCTA-CCATTTAAAACAA-GAGCTCTTGCA-GGCATTCTC--CATCACATCATAAACCTGA-GCTTTCTAAAAcagggtgtggcaaactaccatgcatgg-accatgtctgac-acagtct-gcgtttgtaagtaaagttg-taatgggacacagccaatacatgtgttaca-taatgtct-ctggctacttt--catggtataatggaagagctgagtca-ttgagagagagaccatatggcttggaaaaacttaaaatatttaacat-ttagccccttgcagaaaatacttgctgactcttgTTTTAAAAAGAT-CTCTGTT-TAGAAT-GCTA-CCTATTGTGTTCTGGATAGAATCACAACTC-TTTACCACAATCAACACAGCTTCAGccctgcttctacatccagcctc-atctatttctgctcctcctccttattttcctcctggccatgctgatggattgtcagcttcccagatgtgcgagaatctctcctcccttcc-caacatt-ctcatg-ctctccctctgcct-ctcaa-gaacttc-ctgcc--ccatctctcatgacaaatcctttctacattctttaagatgcagcccctttgctccttcct i panPan2.chr14 C 0 C 0 s gorGor5.CYUI01000093v1 11924 2415 - 2320194 GATGTTCTACAACATTGCTTAACGCAAGGGGA--GACGCTCCTGACTCAGAGTGTTTAA-TTGCTCACCTACTTCTTT-TTCTGCCCTCTTGGGCTTCTGAAATGAAAAGAACCCTGGGGTGATACAGTGAGTCAAAGGGGTG-CCAGCCGCATCACAGCAAAA-TAGATTCCTAAAAAATCCCTGGCCT-AAGATGACAGCCTT-GGCTGGATCAGTTTGAATGTG-CTGATAGTGGACATGGTAGAATGAAGGTGGTT-GAAATGTTCATATTAAAGAACTTCCACCCAGATTGCAAGAAAAGAGAGAGGAATGGAGATGGCAG-CA-CGAGCCCCTACAA-AAAAGCAGATGTTTT-GA-GATCAGTTATATTTCTTCTGACAAAAATTAAAGACAGAAACCAAAGTTTAGCCTGAGACTACAATTAATTGGGCAATAAGCCAGAGGCACATATGGCA-TAGACAGATTTAAACATTTCTCCCTGATATTAATACAAACACTAAAATTACAAATACA-TGGATTCC--aaataaaacaaatatgt-aaaaaa-ttaatgaataaaCACTGGGGTCTACAGCAGTATTTGAAGGAGATCTCACAAACAGGTTTG-G-TTTTGAAGGTTAGAACTGGTGGTCTAGAGA-AT-TCATTTCATTCCAGAGAAAGAAAGAGAGGAATTTCTTGGGTTCCTTCAGGAATGCGTCTAGCTTTGCCTCATCTTTGTTTGAACTATGGATATGGCAGAAGAAAACATGAGGATTTCACAGATTTAAGGTGCAAAAAGTCAC-TGGGTTCTCTAAGAAGTCTGGGATTCTTCTGCTGGAAAAATAAGTTTGTTGAGAAAAAATGAGTTGGA-GGAGGCTGTTATTGAAGTGAAGCAGAATTGTTTTTACTAATCTGCTTATTACCCACTCTGTA-GTGTGGAAACAAATTATTCATGCACAAG-GTCCTCTTACTGTT-CCTAGAATGCAGTGGAAAGAGAACAGATTAGTTTTCCTCCCTCAGAACACAACCCCTAGAAACATCCTACCT--CAGATGAGATATTGCC-TAATTATTTTCAAAAAACAGTGAAAC--ATC-ATGGATGTAAA-TG-TTTGCTGCAAAATAAATACATGCTAGA-AACAGAAGCATCTGGGTCA--CAGCTATATTAGAGCT--ACCTGTGTTCCCCTGTCACTGACATTAAAACAAAAATGTC-CAATACAATCATTCAC-AGCGTGGGAGAGGGGAAGTTGAAGGATGGAAAGGCCAGGCATAAAAGGATTTCAGAATTTCCGTCCATAAGGAAGTGGCTTTGTGCACTGTCTGTTACTGCGTGCAAGGTGAAATTTGAAGAATGAAAAC-GTGCAGTAACAAGGGC-TCCTTTGTCCAACTCACCTCTCCAG-ATACCAA-GTTTCAGACATGTTGCATTTT-AATTGAAAGGTTGATATAA-TTTTTTTAAAG--AACACTT-GCGGTGTTTGAAGTGA-CAAAGGCT-GCTGTGACAAAAAAGCAGGGAAAGGGAATTTTTTTT-----TTAAAAGCAAACAACAACAACAAAAACCCCACAGAAAAGCAAACAACAAACAAACAAAAAACAGAGGAAGAAGTC-GAACACCCTGGGCTGT-GACTACTTCCAGGAAGGGGCTAC-AAGAGGCAGTTGGAAATTCTATTTGTTTT--GCAACTGTGGGTTTTCCGGCCTGCTTCCTTTCTAAAGTATATT-ACTCTGCTTTTGGTTCATGAAGTTATCCATTTCTGTTTTCTGGAA-CAGctatgtattttctttat-------------------cta-tcat-ctatctatctatttaccatctatcttttctacctttc-GCTATCAAGA-GCTTGGGTCAAGCAGGATAGAATTC-CAGTGTA-TGTTCACTCTA-CCATTTAAAACAA-GAGCTCTTGTA-GGCATTCTC--CATCACATCATAAACCTGA-GCTTTCTAAAAcagggtgtggcaaactaccatgcatgg-accatgtctgac-acagtct-gcgtttgtaagtaaagttg-taatgggacacagccaatacatgtgttaca-taatgtct-ctggctacttt--catggtataatggaagagctgagtca-ttgagagagagaccatatggcttggaa-aacttaaaatatttaacat-ttagccccttgcagaaaatacttgctgactcttgTTTT-AAAAGAT-CTCTGTT-TAGAAT-GCTA-CCTATTGCGTTCTGGATAGAATCACAACTC-TTTACCACAATCGACACAGCTTCAgccctgcttctatatccagcctc-atctatttctgctcctcct-cttattttccttctggccatgctgatggattgtcagcttcccagatgtgcgagaatctctcctcccttcc-caacatt-ctcatg-ctctccctctgcct-ctcaa-gaacttc-ctgcc--ccatctctcatgacaaatcctttctacattctttaagatgcagcccctttgctccttcct i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr20 21110 2445 + 85365473 GATGTTCTACAACATTGCTCAACACAAGGGGA--GACGCTGCTGACTCAGAGGGTTTAA-TTGTTCACCTACTTCTTT-TTCTGCCCTCCGGGGCTTCTAAAATGAAAAGAACCCTGGGGTGATAAAGTGAGTCAAAGGGGTG-CCAGCCGCATCACAGCAAAA-TAGATTCCTAAAAAATCCCTGGCCT-AAGGTAACAGCCTT-GGCTGGATAAGTTTGAATGTG-CTGATAGTGGACACAGTAGAATGAAGGTGGTT-GAAATATTCATATTAAAGAACTTCCACCCAGACTGCAAGAAAAGAGAGAGGAATGGAGATGGCAG-CA-TGATTCCCTGCAATAAAAGCAGATGTTTT-GA-GATCAGTTATATTTGTTCTGAAAAAAA-TAAAGACAGAAACCAAAGTTTAGCCTGAGGCTACAATTAATTTGGCAATAAGCGAGAGGCACATATGGCA-TAGACAGATTTAAACACTTCTCCCTTATATTAATACAAATACTAAAATTACAAATAAA-TTGATTCC--AAATAAAACAAATATTT-AAAAAATTTAACGAATAAACACTGGAGTCTATAGTAGTATTTGAAGGAGATCTCACAAACAGGTTTG-GTTTTTGAAGGTTAGAACTGGTGGTCTAGAGA-AT-TCACTTCATTCCAGAGAGAGAAAGAGAGGAATTTCTTAGGTTCCTTCAGGAATGCGTCTAGCTTTGCCTCATCTTTGTTTGAACTATGGATATGGCAGAAGAAAACATGAGGATTTCACAGATTTAAGGTGCAAAAAGTCAC-TGGGTTCTCTAAGAATTCTGGGATTCTTCTGCTGGAAAAATAAGTTTGTTGAGAAAAAATGAGTTGGA-GGAGGCTGTTACTGAAGTGAAGCAGAATTGTTTTTACTAATCTGCTTGTTAACCACTCTGTA-GTGTGGAAACAAATTATTCATACACAAG-GTCTTCTTACTGTT-CCTAGAATGCAGTGACAAGAGAACAGATTAGTTTCTCTCCCTCAGAACACAACCACTAGAAACATCCTACCT--CAGATGAGTTATTGCC-TAATTATTTTCAAAAGACAGTGTAAA--ATG-ATGGATGTAAA-TG-TTTGCTACAAAATAAATACATGCTAGA-AACAGAAGCATCTGGGTCA--CAGCTATATTAGAGCT--GCCTGTGTTCCCCTGTCACTGAGATTAAAACAAAAATGTC-CAATACAATCAATCAC-AGCATGGGAGAGGGGAAGTTGAGGGATGGAAAGGCCAGTCATAAAAGGATTTCAGAATTTCAGTCCATAAGGAAGTGACTTTGTGCATTGTGTGTTACTGTGTGCAAGGTGAAGTCTGGAGAAAGAAAAC-GAGCAGTAACAAGGGC-TCCTTTATCCATCTCACCTCTCTAG-ATACCAA-GTTTCAGACATGTTGCATTTT-AATTGAAAGGTTGATATAA-TTTTTTAAAAAATAACACTT-GTGGTGTTTGAAGTGA-CAAATGCT-GCTGTGACAAAAAAGCAGGAAAAGAGAATTTAAAAAAAAAAAAAAAAGCAAACAGCAACAAAAAAAAACCCACAAAACAGCAAGCAACAAACAAACAAAAAACAGAGGAAGAAGTCAAAACACCCTGGGCTGT-GACTACTTCCAGGAAGGGGCTAC-ACGAGGCAGGTGGAAATTCTATTTGCTTT--GCAACTGTGGGTTTTCTGGCCTGCTTCCTTTCTAAAGTATATT-ACTTTGTTTTGGGTTCATGAAGTTATCCCTTTCTGTTTTCTGGAA-CAGctatgtattttctttatctatcatcaatctgcctgccta-tcat-ctatccgtctatttactatctctcttttctacctttc-GCTATCAAGA-GCTTGGGTCAAGCAGGATAGAATTC-CAGTGTG-TGTTCACTCTA-CCATTTAAAACGA-GAGCTCTCGTA-GGCATTCTC--CAGCACACCATAAACCTGA-GCTTTCTAAAACAGGGTGTGGCAAACCACCATGCATGG-GCCGTGTCTGAC-ACAGTCT-GCATTTGTAAGTAAAGTTG-TAATGGGACACAGCCAATACATGTGTTATA-TAATGTCT-CTGGCTACTTT--CATGGTAAAATGGAATAGCTGAGTCA-TTGAGAGAGGGACCATAtggcttggaa-aacttaaaatatttaacat-ttagccctttgcagaaaatatttgctgactcttgTTTT-AGAAGAT-CTTTGTT-TAGAAT-GCTA-CCTATTGCCTTCTGGGTAGAATCACAACGC-TTTACCACAGTCAACACAGCTTCAGCCCTGCTTCTATATCCAGCCTC-ATCTATTATTTCTGCTGCTTCTCATTTTCCTTCTGGCCATGCTGATGGATTGTCAGCTTCCCAGATGTGCGAGAATCTCTCCTCCCTTCC-CGACATT-CTCATG-CTTTCCCTCTGCCT-CTCAA-GAACTTC-CTGTC--CCATCTCTCATGACAAATCTCTTCTTCATTCTTTAAGATGCAGCCCCTTTGCTCCTTCCT i nomLeu3.chr20 N 0 C 0 a score=16062.000000 s hg38.chr7_KI270899v1_alt 5500 32 + 190869 taaggatgtctgtctggctctattttgggtga s panPan2.chr14 3248 32 - 107357366 taaggatgtctctctggctctattttgggtga i panPan2.chr14 C 0 C 0 s gorGor5.CYUI01000093v1 14339 32 - 2320194 taaggatgtctgtctggctctattttgggtga i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr20 23555 32 + 85365473 TAAGGGCGTCTGTCTGGCTTCATTTTGGGTGA i nomLeu3.chr20 C 0 C 0 e panTro5.chr17 6849 30 + 83181570 I a score=620523.000000 s hg38.chr7_KI270899v1_alt 5532 854 + 190869 cgtgc-tccttctg-catctcccagagccagcctgtgtgtgtcagctacaacatttctttgcatctctgtgtcATATATCACCAAATCT-GCCTAAGCTTGCATGAGTCACTGCATGAC-AACTTCAGACTCCACCAGCATTG-TCCCCACTAACCACAAGGCTTAGACATTCGTCCAGTATGCTCGGGGTTGTGGGGTGGTAGCAGTAACCGGCTGGTGACCAT-CATTTCTTATATCAGAATCAAATCTGTAG-ATCTCTGC-CATTCAT-AAGTATTTGGAGTTTAAAATTAGC-ATAAAGATTTTCCTTAAAATAAGAACAAATGGCTTGAGTAGGCTTTTGGAACACA----GGATGTTTCCACTG-GTTCATTTCTGTGTTCAATATTCCCACATGAATCTAA-ACACgg-ctctgctctta-gtagctatgtgaccctag-gaaagtcactcaatctccctcagctaaattttgttgtgtg-ag-taatgaggagagagttgtgatttgtatttagtgaa-aaataacaaacaaa-aggcatttagatttctggaacctggt-atgtagtagaacctcatgaaa--tactagctctgttGAAAAAACTAGACTGAAAGAAGC-TTACAAAGTCAACA-AGAGTTTGAGGCAGTGAAGG-ACTTAGAGGAGGA------GCTGCTGCTGCAGCCTGTAGCTCCTGGAAGCCCGTTTTGTCCATGATTTAGCAG-GAATGCATTACCCTTCCA-TGAGG-AGGCACTGCCCACAGAAACCAAGGCC--ATTCTTTGAAGACAAACATGTCTTAATAGCCTTTACATTATGTAATAGTGTAATACAAATAATAATT-TA-TTATTAGTAATAATGTGAAATTATTTACAGTa s panTro5.chr17 6879 875 + 83181570 CGTGCTTCCTTCTGCCATCT-CCAGAG-CAGCCTGTGTGTGTCAGCTACAACATTTCTTTGCATCTCTGTGTCATATATCACCAAATCTGGGCTAAGCTTGCATGAGTCACTGCATGACAAACTTCAGACTCCACCAGCATTGCTCCCCACTAACCAAAAGGCTTAGACATTCGTCCAGTATGCTCGGGGTTGTGGGGT-GTAGCAGTAACCAGCTGGTGACCATGCATTTC-TACATCAGAATCAAATCTGTAGAATCTCTGCGCATTCATAAAGTATTTGGAGTTTAAAATTAGCAATAAAGA-TTTCCTT-AAATAAGAACAAATGGCTTGAGTAGGCTTTGCGAACATAGGGGGGATGTTTCCACTGCGTTCATTTCTGTGTTCAATATTCCCACATGAATCTAATACACGgactctgctcttacgtagctatgtgaccctggcgaaagtcactcaatctccctcagctaaattttgttgtgtgtagttaatgaggaGAGAGTTGTGATTTGTATTTAGTGAATAATTAACAAACAAATAGGCA-TTAGCTTTCTGGAACCTGGTAATGTAGTAGAACCTCATGAACATTACTAGCTCTGTCTGATAAACTAGACTGAAAGAAGCTTTTCAAAGTCAACATACAGTTTGAGGCAGTGAAGGCACGT-GAGGAGAA------AGCGCTGCTGCG--CTGTAGCT-CTGGAAGCCGCGTTTGTCCAT-ATTTAGCAGCGAATGCATTACCCTTCCATTGAGGAAGGCACTG-CCACAGAAACC-AGGCCGGATTCTTTGAAGACAAACATGTCTTAATAGCCTTTACATTATGTAAT-GTGTAATACAAATAATAATTCTATTTATTAGTAATAATGTGAAATTATTTACAGCC i panTro5.chr17 I 30 C 0 s panPan2.chr14 3280 850 - 107357366 cgtgc-tccttctg-catctcccacagcCAGCCTCTGTGTGTCAGCTACAGCATTTCTTTGCATCTCTGTGTCATATATCACCAAATCT-GCCTGAGCTTGAGTGAGTCACTGCATGAC-AACTTCAGACTCCACCAGCATTG-TCCCCACTAACCACGAGGCTTAGACATTTGTCCAGTATGCTCGGGGTTGCGGGGTGGTAGCAGTAAGCAGCTGGTGAGCAT-CATTTCTTACATCAGAATCAAATCTGTAG-ATCTCTGC-CATTCAT-AAGTATTTGCAGTTTAAAATTAGC-ATAAAGATTTTCCTTAAAATACAAACAAATGCCTTGAGTAGGCTTTTGGAATGTA----GGATGTTTCCACTG-GTTCATTTCTGTGTTCAGTATTCctacatgaatctaa-acacga-ctctgctctta-gtagctatgtgaccctgg-gaaagtcactcaatctccctcagctaaattttgttgtgtg-ag-taatgaggagagagttgtgatttgtatttagtgaa-taataacaaacaaa-aggcatttagctttctggaaccaggt-atgtagtagatcctcatgaaa--tactagctctgttGATAAAACTAGACCAAAAGAAGC-TTACAAAGTCAACG-ACAGTATGAGGCAGTGAAGG-ATGTAGAGGAGAA------GCTGCTGCTGCAGCCTGTAGTTCCTGGAGGCCCGTTTTTCCCATGATTTAGCAG-GAACACACTACCTTTCCA-TGAGG-AGACACTGTCCACAGAAACCAAGGCC--ATTCTTTGAAGACAAAGATGTCTTAATAGCCTTTACAT----taatagtgaaatataaataataatt-ta-ttagtaataataatGTGAAATTATTTACATTA i panPan2.chr14 C 0 C 0 s gorGor5.CYUI01000093v1 14371 848 - 2320194 cgtgc-tccttctg-catctcccagac-cagcctgtgtgtgtcagctacaacatttctttgcatctctgtgtcATATATCACCAAATCT-GCCTAAGCTTGCATGAGTCACTGCATGAC-AACTTCAGACTCCACCAGCATTG-TCCCCACTAACCACAAGGCTTAGACATTCGTCCAGTATGCTCGGGGTTGTGGGGTGGTAGCAGTAACCAGCTGGTGACCAT-CATTTCTTACATCAGAATCAAATCTGTAG-ATCTCTGC-CATTCAT-AAGTATTTGGAGTTTAAAATTAGC-ATAAAGATTTTCCTTAAAATAAGAACAAATGGCTTGAGTAGGCTTTTGGAACATA----GGATGTTTCCACTG-GTTCATTTCTGTGTTCAATATTCCCACATGAATCTAA-ACACga-ctctgctctta-gtagctatgtgaccctgg-gaaagtcactcaatctccctcagctaaattttgttgtgtg-ag-taatgaggagagagttgtgatttgtatttagtgaa-taataacaaacaaa-aggcatttagctttctggaacctggt-atgtagtagaacctcatgaaa--tactagctctgttGATAAAACTAGACTGAAAGAAGC-TTTCAAAGTCAACA-ACAGTTTGAGGCAGTGAAGG-ACGTAGAGGAGAA------GCTGCTGCTGCAGCCTGTAGCTCCTGGAAGCCCGTTTTGTCCATGATTTAGCAG-GAATGCATTACCCTTCCA-TGAGG-AGGCACTGCCCACAGAAACCAAGGCC--ATTC-TTGAAGACAAACATGTCTTAATAGCCTTTACatta--taatagtgtaatacaaataata--t-ta-ttattagtaataatGTGAAATTATTTACAGTa i gorGor5.CYUI01000093v1 C 0 C 0 s nomLeu3.chr20 23587 849 + 85365473 CGTGC-TCCTTCTG-CATCTCCCAGAGCCAGC----ATGTGTCAGCTACGGCATTTCTTTGC----CTGTGTCGTATATCACCAAATCT-GCCTAAGCTTGTGTGAGTCACTGCATGAC-AACTTCAGACTCCACCAGCATTG-TCCGCACTAACCACGAGGCTTAGACATTTGTCCAGTAAGCTCAGGGTTGTGGGGTGGTAGCAGTAACCAGCTGGTGAGCAT-TATCTCTTACATCAGAATCAAATCTGTAG-ATCTCAGC-CATTCAT-AAGTATTTGGAGTTTAAAATTAGC-ATAAAGATTTTCCTTAAAATAAGAATAAATGGCTTGAGTAGGCTTTTGGAACATA----GGATATTTCTGCTG-GTTCATTTCGGTGTTCAGTATTCCCACATGAAtctaa-acatga-ctctgctctta-gtagctgtgtgaccctgg-gaaagtcactcaatctctctcagctaaattttgttgtgtg-ag-taatgagaagagagttgtgatttgtatttagtgag-taataacaaacaaa-aggcatttggctttctggaacctggt-atgtagtagatcctcatgaaa--taccagctctgttGATAAAACTAGACCGAAAGGAGC-TTTCAAAGTCAACA-ACAGCATCATGCAGTGAAGG-ACGTGGATGAGAAgctgctgctgctgctgcagcctgcagctcctgGAGGCCCGTTTTGTCCATGATATAGCAG-GAACGCACTACCTTTCCA-TGAGG-AGACACTGCCCACAGAAACAAAGGCT--ATTCTTTGAAGACAAACATGTTTTAATCATCTTTACATTACGtaatagtgtaataaaaataataatt-ta----ttaataataatataaaattatttatatta i nomLeu3.chr20 C 0 I 3958 a score=30182.000000 s hg38.chr7_KI270899v1_alt 6386 138 + 190869 ccctaaccctaaccctaacccctaatcctaaccct---------aacccctaaccct----aatcctaaccctaaccctaaccctaaccct-aacccctaac-----cctaaccctaaaaccctaaccctaaaaccctaa-ccataacccttaccctt s panTro5.chr17 7754 155 + 83181570 Tcctaaccctaa-cctaacccctaatcctaaccctaccttaaccaacacctaaccctacccaacccttaacctagcccctaacctaaccccaaacccctaaccctaacctaaccctaaaa-cctaaccctaaaaccctaacccataa-ccttaccctt i panTro5.chr17 C 0 C 0 s panPan2.chr14 4130 139 - 107357366 CCCCAaccctca-ccttcaccctcaccctcaccct---------aac-cctcaccct----caccctaacactaaccccaaccccaacccc-aa-ccctaaccctaaccccaacctgtaaccctaaccct-aacccctaa-ccctaaccctaaccctT i panPan2.chr14 C 0 N 0 s gorGor5.CYUI01000093v1 15219 119 - 2320194 cccaaaccctaa-------ccctaaccctaaccct---------aa--cccaaccca----aaccacaaccctaaccctaaccctaaccc--aa-ccctaaccctaacccaaccctaa---cccaacc---aaaccctaa-ccctaaccca------- i gorGor5.CYUI01000093v1 C 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=76516.000000 s hg38.chr7_KI270899v1_alt 6524 627 + 190869 accctaatcctaaccctaatcct-taccctt-acccttacc---ctgaccctaaccctaatccttac-ccttatcctaccccta---acccttaacccctaaccgctagccctaacccttaaccctaaccataac-cctaa-aacgctaaccctcatcctcaccctcacacctcaccctcacccaaaccataatccctaacccctaactcttaacc----cctaaccctaacccttgaccctaacccttgac--cctaacccctgaccc-tgacccttaaccctaaccctaacccctaaccctaacccttaacccttaaacct-taaccctcatcctcaccctcaccctcacccctaaccctaacccctaacccaaaccctaaccctaa-----accctaaccc-taaacccaac--ccaaaccctaacctgaaccctaacccgaaccataaacctgaaccctaaatccgaacctgaacccgaaccctaaccataacccaaacccgaacccaaaccctaacccctaacccctaaccctaaccct-accctaaccc---aaccctaa--cccaaccctaactctagccctagccctagccctagccctaagccctaagccctaagcctaaccccaaccccaaccccaaccctaacccta---ac s panTro5.chr17 7909 582 + 83181570 a-cctaatcctaaccctaaccttatacccttcacccttacccctctgaccctag-cctaatccttacgccttatcctacccctatttaccct--aaccctaacc-ctaa-cctaacccttaaccctaa-cataacgcctaa-aaccctaaccctaatac---cgctcac------ccctcacccaa----------ctaatccc-------taatc----cctaaccctaacccttgaccctaa-ccttgacggcctaa--cctgacccttgaccctaaccgctaacactaacgccttaccctaagccctaacact--aacctgcaaccctcatcctcaccctca-cctca-ccctaaccctaa-ccttaacccaaaccctaaccctaa-------cctaaccc--aaacccaaccgcgaaaccct-acctgaa-cctaa-ccgaaccataaacctgaaccctaaacccgaa-------ccgaaccctaaccataaccagaacccaaacccgaaccctaacccctaa-ccctaa-cctaa-cct-accctaaccc---aaccctaa--cccaaccctaactctagccctagccctagc-----cgctaagccctaag-cctaagcctaa-cccaaccccaaccccaacccaaccccaacctac i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01000093v1 15338 602 - 2320194 accctaaccctaaccctaaccc--tacccta-acc--tacc---ctaaccctaaccctaaccctaac-ccctaacccaacccta---acct---aaccctaacc-ctaaccctaaacc-taaccctaaccctaac-cctaaccaccctaacccta-------ccctaac--cctaccctaaccctaaccctaacccctaaccca---accctaaccctaacctaaccctaaccct--accctaa-ccctaac--cctaa--ccctaccc-taaccctaacc-ctaaccctaac-cctaaccctaacccttaaccct--aaccc-taaccctaaccctaaccctaaccctaa-ccctaaccctaa-ccctaaccccaaccctaaccctaaccctaaccctaacccctaaccctaacccctaacccttaacctaac-cctaaccctaaccctaacccctaaccc-aacccctaa-------cccaaccctaaccctaaccctaaccccaaccctaaccctaaccc--aa-ccctaaccctaaccctaaccctaacccctaacccctaaaccctaaccccaaccccagccccaaccctacc-ctaaccctaaaccctaaaccctaaaccccaacccaacccaaccctaaaccctaacccta---ac i gorGor5.CYUI01000093v1 C 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=1746.000000 s hg38.chr7_KI270899v1_alt 7151 3 + 190869 cct s panTro5.chr17 8491 3 + 83181570 cct i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01000093v1 15940 3 - 2320194 cct i gorGor5.CYUI01000093v1 C 0 N 0 s calJac3.chr8 91742295 3 - 128169293 cct i calJac3.chr8 N 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=24536.000000 s hg38.chr7_KI270899v1_alt 7154 158 + 190869 tcctcagcctcTCAACCTGCTTGGGTTATAGGTATGAGCCCGGGTGCCTGGCc-aaacattccattttatatgtatatgctaggaatggataatctctacaccaaat-tatgaaaa-ttctacct--taaacaata-ccaatag--caatattatacttag-gaata s panTro5.chr17 8494 165 + 83181570 tcctcagcctcTCAACCTGCTTGGGTTACAGGTATGAGCCCGGGTG-CTGGCC-AAACATTCCATTTTATATGTATATGCTAGGAATGAATAATATCTAAACCAAATGTATGAAGATTTCTACCTCATAAACAATATCCAATAGAATATTATTATACTTAGCGAATA i panTro5.chr17 C 0 I 96 s calJac3.chr8 91742298 159 - 128169293 gcctcagcctcccaaaatgctgggattactggcataagccaccatgcttggccAAaaaaatccattttatatgtatacaccagcaatgaataatctgaaaacaaaat-tacaaaaa-ttccactg--caaataata-ccaatag--caataatatacttag-gaata i calJac3.chr8 C 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=4762.000000 s hg38.chr7_KI270899v1_alt 7312 78 + 190869 aatggaatgaaacgacaagacttagatgagggaaattataagacattacttaaggaaattaaacttccagtaaatgta s calJac3.chr8 91742457 78 - 128169293 aatgtaatcaaagggtaagacttagaaggggaaaattataagatattgcttaaggaaattaaagaccaaataaatgta i calJac3.chr8 C 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I e panTro5.chr17 8659 96 + 83181570 I a score=26451.000000 s hg38.chr7_KI270899v1_alt 7390 136 + 190869 aaaatgta-----tcttatttgtggatttgtagaccaca-ttgttaagtttcccaaagtacacaaagcaatccgtggattcgatgttattcctacaaaaatcccaaaggccttgggacagaagtggataagctgatcctgat s panTro5.chr17 8755 141 + 83181570 AAAATGTATATCTTCTATtttgtggatttgtagaccaca-ttgttaagtttcccaaagtacacgaagcaatccgtggattcaatgttattcctacaaaaatcccaaaggccttgggacagaagtggataagctgatcctgat i panTro5.chr17 I 96 C 0 s calJac3.chr8 91742535 136 - 128169293 aaaacatg-----tc-atatcatggatctgaaaaccatattttttaagtttgccaaactacacaaagcaatctacagattcagtgttattcctatgaaaatcccaaaggtcttgggacagaaatgagaaagctgatcctaat i calJac3.chr8 C 0 I 73 e nomLeu3.chr20 24436 3958 + 85365473 I a score=25392.000000 s hg38.chr7_KI270899v1_alt 7526 62 + 190869 cacatcccaatttcaaattttattacaaaggaacagtaataaaaacagtgggatccttgcac s panTro5.chr17 8896 62 + 83181570 cacatcccaatttcaaattttattacaaaggaacagtaataaaaacagtgggatcctcgcac i panTro5.chr17 C 0 C 0 s calJac3.chr8 91742744 62 - 128169293 cacatcccaacttcaaatcttactacaaagcaatagtaatcaaaacagcatgatactggcac i calJac3.chr8 I 73 C 0 s cebCap1.NW_016107703v1 360615 62 - 2125214 cacatcccaatttcaaaccttattacaaagcaatagtaatcaaaatgccatgaaactggcac i cebCap1.NW_016107703v1 N 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=470020.000000 s hg38.chr7_KI270899v1_alt 7588 653 + 190869 aggaataaacagaaagatcaactgaattgaattgggagtccagacagaaaacaatacctctatgctcaactgattttagacaaggtccattaccagtaaattggggaaagaatcctgtcctcaacaagtgatgtaaggcaacttgctatccacataaagggaaatgaaattgtatccttacctcat-accaca-t-aaaaaattaacttacaatggatcaaagaccaaaacaggtgaaaactaaaaactctggaagaaaacgtacagttaagcattcatgaccttacacgtagcaatagtttcctacatctgacaccaaaagcacagaccacaaaaggaaaaataaatcaatttatttcctcaaaattcacaacttttacgtctcagaagacatgaagaaaaaagttgaaagacaaAAT-GTTATAAtaggaaaaacaactgtcttatagtatactctcaacactcaacacagaacacttctgttaccagatacatggg---ttttttccccacacagaccaaatcttgggtaccagctgcgtgtcctacagtgcaatccaattgtgacagtaaatggagaaagcatcagaccccacaggctaagggctcagtcctaGGAATACACGTCATGCCCcttgtcgcttgcaaat-ttaaatgac s panTro5.chr17 8958 653 + 83181570 aggaataaacagaaagatcaactgaattgaattgggagtccagacagaaaacaatacctctatgctcaactgattttagacaaggtccattaccagtaaattggggaaagaatcctgtcctcaacaagtgatgtaaggcaacttgctatccacataaagggaaatgaaattgtatccttacctcat-accaca-t-aaaaaattaacctacaatggctcaaagaccaaaacaggtgaaaactaaaaactctggaagaaaacatacagttaagcattcatgaccttacatgtagcaatagtttcctacatctgacaccaaaagcacagaccacaaaaggaaaaataaatcaatttaattcctcaaaatttacaacttttacgtctcagaagacatgaagaaaaaagttgaaagacaaAAT-GTTATAAtaggaaaaacaactgtcttatagtatactctcaacactcaacacaaaacacttctgttaccagatacatggg---ttttttccccacacagaccaaatcttgggtaccagctgggtgtcctacagtgcaacccaattgtgacagtaaatggagaaagcatcagaccccacaggctaaggactcagtcctaGGAATACACGTCATGCCCcttgttgcttgcaaat-ttaaatgac i panTro5.chr17 C 0 C 0 s calJac3.chr8 91742806 641 - 128169293 aagaataaacagaaagatcaattgaat-----tgggagtccagacataaaacaatacctccatgctcaactgattttagacaagatccatatccattaaattggggaaaaaatgctgtcctcaacaagtgatgtaaggcaacttgctgtccacacagagggaaatgaaattgcatccttacc-tattaccaca-taaaaaaattaacttaaaatggatcgaagacctaaatattacaaaacctaaaactctataagaaaacaaacagttaaaccttcatgaccttggatgtagcagtagtttcttagatctgacaccgaaaccacaaaccacaaaaggaaaaataaatcaattgatttcctcgaaattcaaaacttttacgcctcagaagacatgaaaaaaaaa-ttgaaagacaaAATTGTTATAAtaggaaaaacaactgtcttctattatgctctcaacactcaacaccaaacacttctgttaacagaggcatggg---ttttttccccacacagaccaaatcttgggtaccaactaagtgt---------caatccaattctgacactaactggagaaagcatcagaccccacaggctaagagctcactcctaGGAATGCAGGTCATGCCTCTTGTTGCTTGTGTTTGTCAACTGAC i calJac3.chr8 C 0 I 5 s saiBol1.JH378119 26258268 641 + 36383700 aagaataatcagaaagatcaattgaattgaactgggagtccagacataaaacaatacttccttgctcaactgactttagacaagatccatacccattaaattgggaaaaaaatgctgacctcaacaagtgatgtaaggcaacttaatatccacatagagggaaatgaaattgtacccttaccttatcaccacattaaaaaaattgatttaaaatagatcaaagacctaaatatggcaaaactaaaaactctataagacaacaaacagttaaacattcatgaccttggatgtagcagtagtttcttagatctgacaccaaaatcacaaaccacaaaaggaaaaataaatgaattgatttccttgaaattcaaaacttttacacctcagaagacatgaaaaaaaaagttgaaagacaaAATAGTTACAAtaggaaa---aactgtcttctattatact-------ctcaacacagaactcttctgttaacagataaatgggtttttttttcccctcgcagaccaaatcttgggtaacagctgggtgt---------caatccaattctgacattaactagagaaagcatcagaccccacaggctaagggctcagtcctaggaatgcaggtcatgcctcttgttgcttgcaaat-tcaattgac i saiBol1.JH378119 N 0 C 0 s cebCap1.NW_016107703v1 360677 654 - 2125214 aaaaataaacagaaagatcaattgaattaaattgggaatccagacataaaacaatacctctatgctcaaatgattttacacaaggtccataatcattaaattggggaaataatgctgtcctcaacaagtgatgtaaggcaactttctatccacttaaagagacacgaaattatatccttaacttat-gccaca-tgaaaaaattaacttaaaatggatcaaagacctaaatatggaaaaaccaaaaaatctagaagaaaacgtacagttaaaccttcatgaccttggatgtagcaatagtttcttagatctcacatcaaaactacaaaccacaaaaggaaaagtaaatcaattgatttcctcaaaattcaaaacttttatgcctcagaagacatgaagaaaaag-ttgaaagacaaAATTGTTATAAtaggaaaaacaactgtcttctagtatactctcaacgctcaacacagaacacttctgttaacagatgcatggg---ttttcttcccaaacagaccaaatcttgggtaccagctgggtgtcctacagtgcaatccaattctgacactaactggagaaagtatcagaccccacaggctaagggttcagtcctaggaactcaggtcatgcctcttgttgcttgcaaat-tcagttgac i cebCap1.NW_016107703v1 C 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=7368.000000 s hg38.chr7_KI270899v1_alt 8241 13 + 190869 aaacacaaggatg s panTro5.chr17 9611 13 + 83181570 aaacacaaggatg i panTro5.chr17 C 0 C 0 s saiBol1.JH378119 26258909 13 + 36383700 aaacacaaggatg i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 361331 13 - 2125214 aaacacaaggatg i cebCap1.NW_016107703v1 C 0 C 0 e calJac3.chr8 91743447 5 - 128169293 I e nomLeu3.chr20 24436 3958 + 85365473 I a score=346406.000000 s hg38.chr7_KI270899v1_alt 8254 482 + 190869 gtaaaaagaaagtgactttatgccagagcttagctgaagggaacatacaggctcttgccttaagggaagcgcttccactttctgggcagaaagctgggctttc-------ggacttgccagaatggcatgcaggggatgag------------------------gtgaggaggtgcggggtctatgggacatgctctgatgttttctccattaggtggtcttgctagcaccaccacgggcagagccaggttgtaaattgactgttgtctgctgccaatctactggtgggggagagatatggaagtgcc-agtttgtttcaaggtttggtccctggaacttataagtaatcacacagttggaaaagtttgcagtataggaagtgtctggtggagagacagtaaagcttataattgcattcctaaagagct-------aagtgcaggaacagcaaaatggtaaaactaattcatttcttctttaagaaaatatgggtactaagttacaagactgtaaccact s panTro5.chr17 9624 482 + 83181570 gtaaaaagaaagtgactttatgccagagcttagctgaagggaatgtacaggctcttgccttacgggaagcgcttccactttctgggcagaaagcggggctttc-------ggacttgccagaatggcatgcaggggatgag------------------------gtgaggaggtgcggggtctatgggacatgctctgatgttttctccattaggtggtcttgctagcaccaccatgggcagagccaggttgtaaattgactgttgtctgctgccaatctcctggtgggggagagatatggaagtgcc-agtttgtttcaaggtttggtccctggaacttttaagttatcacacagttggaaaagtttgcagtataggaagtgtctggtggagagacagtaaagcttataattgcattcctaaagagct-------aagtgcaggaacagcaaaatggtaaaactaattcatttcttctttaagaaaatatgggtagtcagttacaagactgtaaccatt i panTro5.chr17 C 0 C 0 s calJac3.chr8 91743452 493 - 128169293 gtaaaaagaaagtgactttatgccagaactcagcagaaggaaacatagaggctcttgccttaaggaaacagcttccactttcggggcagaaagtgggagatttaaaaaggggacttcacaggatggtatgcaggggatggg------------------------gtgaggaggtgcagggtctatgggacttgctctgacgttttatccattaagtggtcttgccaacaccaccacaggcagagctgggttgt-aactgactgttgtct--tggcaatctcctggtgggggagag-tttggagatgcctagtttatttaaaggtttggtccctggaacttctaagtaaacacacagtaagaaaagtttccagtgtaggaagtgtctggtggagagacagtaaagcttataattgcattcctaaacagctaagtaggaagtgcagaaaaaggaaaacagtaaacgtaattcattttttctttaagaaaatatgggtactcagttataagactgtaactact i calJac3.chr8 I 5 C 0 s saiBol1.JH378119 26258922 519 + 36383700 gtaaaaagaaagtgactttatgccagagcttagctgaagggaacatacaggctcttgccttaaggaaactgcttccactttcggggcggaaagcgggagatttaaaaaggggacttcgcagaatggcatgcaggggatggggtgaggaggtgcaaggtctatagcgtgaggaggtgcagggtctatgagacttgctctgatgttttatccattaggttgtcttgctaataccaccacaggcatagctagcttgt-aattaactgttgtctcctggcaatctcctggtgggggagag-ttcggagatgcctagtttatttcaaggtttggtccctggaacttctaagtaaacacacagtaagaaaagtttccagtgtaggaagtgtctgctggagagacagtaaagcttataattgcattcctaaagagctaagtaggaagtgcagaagaaggaaaacagtaaatgtaattcatttcttctttaagaaaatatggatactcagttacaagactgtaactact i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 361344 479 - 2125214 gtaaaaagaaagtgactttatgccatagcctagctgaagggaacatacaggctcttgccttaagggaactgcttccactttcagggcagaaagcaggagctttaaaagggggagttggcagaatggcatgcaggggatggg------------------------gcgaggaggtgcagggtctatgggacttgctctgatgttttatccattaggtggtcttgctagcaccaccacaggcagagctacattgtaaattgactattgtct-----------cctggtggaggagagctcctgaggtgcctagtttgtttcaaggtttggtttctggaacttctgagtaaacacat----agaaaagtttgcagtgta-gaagtgtctggcagagagacagtaaagcttataattgaattcctaaagagctatgtaggaagtgcaggaaaagaaaagtggtaaaagtagttcatttcttccttacgaaaatacgggtactcagttacaagac--taactatt i cebCap1.NW_016107703v1 C 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=122362.000000 s hg38.chr7_KI270899v1_alt 8736 109 + 190869 taagatgccaaccacaaacagtaggttcccaggttaccttctgtctgactttcctacagattggagactcccacaacacccttattgggttcagcaatttgct--acatca s panTro5.chr17 10106 109 + 83181570 taagatgccaaccacaaacagtaggttcccaggttaccttctgtctgactttgctacagattggaggctcccacaacacccttattgggttcagcaatttgat--acatca i panTro5.chr17 C 0 C 0 s calJac3.chr8 91743945 109 - 128169293 taagatgccaatcacaaatagtaggttcccaggttaccttctgcctaacttggctatagattggaggctcccacaacacccttattgggttcagcaatttact--acagca i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26259441 111 + 36383700 taagatgccaatcacaaatagtaggttcccaagttaccgtctgtctgacttggctacagaatggaggctcccataacacccttattgggttcagcagtttactacacagca i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 361823 106 - 2125214 aaagatgcccatcacaaa---taggttcccaggttaccctctgtctgacttggctacagattggaggttcccacaatacccttattgggttcagctatttact--acagca i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487315v1 5680945 109 - 15679484 TAAGATGATAATcacaaataataagttcccaggctatcttctgtctgacttcactacaaattggaggctcccacaacacccttatttggttcagcaatttgct--acagca i aotNan1.NW_018487315v1 N 0 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I a score=229422.000000 s hg38.chr7_KI270899v1_alt 8845 168 + 190869 cattacaca---acccatgaaagc-agtgtacttactattcctgactcattaccaaggatcttttaaacactacaaatgaaaagccagatgaagagatgcacaaggtgaggtatatggaaggaatgca------------ggcctcccatgccctcaccagatatgatcctcccagtatctctt s panTro5.chr17 10215 168 + 83181570 cattacaca---acccatgaaagc-agtgtacttactattcctgactcattaccaaggatcttttaaatgctacaaatgaaaagccagatgaagagatgcacaaggtgaggtatatggaaggaatgca------------ggcctcccatgccctcgccagatatgatcctcccagtatctcct i panTro5.chr17 C 0 C 0 s nomLeu3.chr20 28394 171 + 85365473 cagtacacagttatccatgaaaac-agtgtacttactattgctgacttattaccaaggatcttttaaatgctacaaattaaaagccagatgaagagatgcacagggtgaggtatgtggaagggatgca------------catctcccattccctctccagatatgatcctcccagtatctcct i nomLeu3.chr20 I 3958 C 0 s calJac3.chr8 91744054 168 - 128169293 cattacaga---actcacaaaagc-agtatacttaccattgctgacttattaccaaggatatttcaaaggctacaaatgaacaaccaaatgaagagatgcacaaggtgaggtatgtgaaagaggtgca------------agcctcctaagccctctccagatatgattctcccatcatctccc i calJac3.chr8 C 0 I 1 s saiBol1.JH378119 26259552 169 + 36383700 cattataga---acccacaaaaacaagtgtacttactattgctgacttattaccaaggatattttaaagactacaaatgaacaaccagatgaagagatgcacaaggtgaggtatgcggaagaggtgca------------agcctcttatgccctctccagatatggttctaccagcatcgtcc i saiBol1.JH378119 C 0 I 1 s cebCap1.NW_016107703v1 361929 147 - 2125214 cattacaga---acctatgaaaac-agtgcacttactagtgcca---------------------aaaggctacagatgaacagctagatggagagttgcacaaggtgagatatatggaagggatgca------------ggtctcccatgccctctccagatatgatcctcccagcatctccc i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018487315v1 5681054 180 - 15679484 cattacaga---acacatgaaaac-agtgtacctactcttgctgatttattagcaaggatattttaaaagttgcaaatgaacagccagatgaagagatgcacaagatgaggtgtgaggaaggggtgcgtggaaggggtgcagcctcccatgccctcttcagatatgaccctcccagcatctccc i aotNan1.NW_018487315v1 C 0 I 7 a score=940.000000 s hg38.chr7_KI270899v1_alt 9013 10 + 190869 gtgttgggag s panTro5.chr17 10383 10 + 83181570 gtgttgggag i panTro5.chr17 C 0 C 0 s nomLeu3.chr20 28565 10 + 85365473 gtgttgagag i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91744223 6 - 128169293 atattc---- i calJac3.chr8 I 1 C 0 s saiBol1.JH378119 26259722 6 + 36383700 atgttc---- i saiBol1.JH378119 I 1 C 0 s cebCap1.NW_016107703v1 362077 6 - 2125214 atgttc---- i cebCap1.NW_016107703v1 I 1 C 0 e aotNan1.NW_018487315v1 5681234 7 - 15679484 I a score=823523.000000 s hg38.chr7_KI270899v1_alt 9023 553 + 190869 agcaacacagatgctctcccaaccctgtcctttattacacaggcagattggttacgtctgtggccataggtgatcaactcaaccatcagcacctctccccttcacagagacgggacgggggaagaaatttcaaattctctcatgacaaggttgcttcccttggcagccagccccactgaggctgtccaggtgcccccagccatcaatcatttcattagcgtacgaaagacacattacttcgta--------------cattcccaaggcttagcgctctgtttcaggacactgcagcagagaccacacattaACTCTTATTACGTTCCAacaacctataaaatggaag-aaaatgtctgcacattagatacttcatcagtgtctgttatccagaatgtataaagaacttttacaactccatagcaaagacaacccaatctaaaaattgacaaaag--------acacacttcaccaacaagcacatgaaaagatgcttaacatcatta-ccataattaaaacca--taaagagataaccc--ttaactcaca-------------------------caagaatagttatactaaaaaataacaag s panTro5.chr17 10393 561 + 83181570 agcaacacagatgctctcccaaccctgtcctttattacacaggcagattggttacgtctgtggccataggtgatcaactcaaccatcagcacctctccccttcacagagacgggacgggggaagaaatttcaaatcctctaatgacaaggttgcttcccttggcagccagccccactgaggctgtccaggtgcccccagccatcaatcatttcattagcatacgaaagacacattacttcgta--------------cattcccgaggcttagcgctctgtttcaggacactgcagcagagaccacacattaACTCTTATTACGTTCCAacaacctataaaatggaag-aaaatgtctgcacattagacacttcatcagtgtctgttatccagaatgtataaagaacttttacaactccacagcaaagacaacccaatctaaaaattgacaaaagactttaatacacacttcaccaacaagcacatgaaaagatgcttaacatcatta-ccataattaaaacca--taaagagataaccc--ttaactcaca-------------------------caagaatagttatactaaaaaataacaag i panTro5.chr17 C 0 I 2191 s nomLeu3.chr20 28575 562 + 85365473 agcaacacagacgctctcccaaccctgtcctttattacacaggcagattggttacattagtggccataggtgatcaactcaaccttcagcacctctccccttcacagagacaggagaggggaagaaatttcaaatcctgtaatgacaaggttggttcccttggcagccagccccactgaggctgtccaggtacccccagccatcaatcatttcattagcatacgaaagacacatcacttcgta--------------cattcccaaggcttagcgctctgtttcaggacactgcggcaaagaccacacattaACTCTTATTATGTTCCAataacccataaaatggaagaaaaaaatctacacattagatacttcattagtgtctgttatccagaatgtataaataacttttacaactccacaacaaagacaaccaaatctaaaaattgacgaaagactttaatacacacttcaccaataaacacatgaaaagatgcttaacatcatta-tcataattaaaacca--tgaagagatacccc--ttaactcaca-------------------------caagaatagttatactaaaaaataacaac i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91744229 543 - 128169293 agcaacacagatgctctcctaaccctgtcctttattatgcaggcagattggttgcatcagtggccataggtgatcaactcaaccatcagcacctctctccttcacagagatgggaggggagatgaaatttcaaatcctctaatgacaaggttggttcctttggaagccagccccactgagggtgtccaggtgcccccagccatcagttatctcattagcatacaaaagacacatc-----ata--------------tgttccaaaggcttattgctctgtttcagaacaccacagcagagaccacacattaACTCTTACGATGTTCCAataacacacaaaatggaag-aaacaatctgcacattagatacttcaaaagtgtctgttatccagaatgtgtaaataatttttacaactcaacaacaaagacaacccaatctaaaaaatg-acaaggactttcatacacactgcaccaacaagcacctgaaaagatgcttaacatcattagtcataattaaaacca--taaaaaa----ccc--ttaaatcaca-------------------------ctataatagttatact---------aaag i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26259728 582 + 36383700 agcaacacaggcactctcctaaccctgtcctttattatgtgggcagattggttgcaacagtggccataggtgatcaactcaacc-tcagcacctctctccttcacagagatgggaggggagatgaaatttcaaatcctctaatgacaaggttggttcctttggcagccagccccactgaggctgtccaggtgcccccagccagcagtcatctca--atcatacgaaagacacatcacttaata--------------tgttccaaaggcttagtgctctgtcttgggataccgcagcagagaccacacattaACTCTTATGATATTCCAataacccacaaaatggaagaaaaaaatctacacattagatacttcaaaagtgtctattatccagaatgtacaaataaattttacaactcaacaacaaagacaacccaatctaaaaaatgaaaaaggactttcatacacactgcaccaacaagcatctgaaaagatgcttaacatcattagtcataattaaaaccatttaaaaaa----ccctgttaactcacagggttatagaatagttatactaagtatagaatagttatactaaaa---aaaaag i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 362083 535 - 2125214 agcaacacagacactctctcgatcctgtcctttattacgcaggcagactggttacatcagtggccataggtgatcaa---------------ctctccccttcagagagatgggagggaggatgaaatttcaaatcctttaatgacaaggttggttcctttggcagccagccccactgaggctgtccagatgcccccagccattggtcatgttattagcatacaaaagacacatcacttcata--------------cattctaaaggcttagcactctgtctcaggacacttcggcagagaccacacattaACTCTTATTATGTTCCAATaacccacaaaatggaag-aaatcatctgcacattaaatacttcataagtgtctgttatgcataatgtataaacaactttta-----caacaaaaaagacaatccaatctaaaaattgacaaaggactttaatacacact---tcaacaagcacctgaaaagatgcttaatatcattagtcataatgaaaacca--taaagagatacccc--ttagctcaca-------------------------ctagaatagttatact-aaa---aaaagg i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487315v1 5681241 574 - 15679484 agcaacacagacactctcccaaccctgtccttcattacacaggaagattggttacatcagtggccataggtgatgaactcaaccatcagcacctcttcccttcacagagatggaagtggggataaaatttcaaatcctctaaagacaaggttggttcctttggcagccagccccactgaggatgtccagctgcccccagccgtcagtcatctcattagcatatgaaagacacatcacttcatacacatcacttcactcattccaaaggcttagcgctctgcctcaggacactggggcagacaccaCACGGAAACTCTTATTATGTTCCAGTaacccacagaatgcaag-aaaaaatctgcacattagagacttcataactgtctgttatccagaatgtataaataacttttacaactccacaacaaa-acaacccaatctaaaaactgacaaaggactttaacacacacttcaccaacaagcacatgaaaagatgcttaacatcattagtcataattaaaacca--taacgagatacccc--ttaactcaca-------------------------ctagaatagttatactaaaa-ataaaaag i aotNan1.NW_018487315v1 I 7 C 0 a score=857572.000000 s hg38.chr7_KI270899v1_alt 9576 815 + 190869 tgttgacaaagatgtgcagaaacttgaactcttaaacactgcttgtgacaatatgaaatggtgcagcctacg-------tgtaaaataatttgatgtttcctcataaagttacaaatagatttaccatatgagttaatgattccattcctaggtatataccccaaagacctgaaaacaactgttcaaacaaaaacctgtatgctctttaaatgtgtcaaggtcataaatatgcaggaaagtctggggaacagttccaggaaaagaaaactGGATCCTaataaaaaaaaaaaaaaaaa--aCACATTATACTCCCAAGTGTGGCATGAggtaaaactgaagtgagtttgtggaccgaattatcatgtaggaacaacgctgatttcctgatctaggggttatgtggtagttacctgggagagtgtccatgctttcagtacaatataccggagtatttTGTGGGACACTGCAAATCTGGTACAGCAATAACTGTTGGGGAATCTAAGGGAAGAAACAAGC--TGTACTTTGTACTACTACTGGAAGTTGCCTAGACATATGACATTATTGGAAAATAAGTTACTTTTTAAAACAACCATGTCAATACCATGCCAGGAAAGCAGACACATCATCAAAATCCATTACAGAGGCTATAGTTCAGCCAAAGCTGTAAAACCCTTAACAAAGTCTCAATGTCAACAGAGTCCACTTAGTAGATATTATTATATTTATTAGTATTAGAGGCCATTGTGTCAATATATTA-----------GTGTTAG-----------------GGCATGGTATGGATATTTAGATTAGTGTTAGGGAACGGTGTGGATATTGTATTGGTGTT s nomLeu3.chr20 29137 812 + 85365473 tgttgacaaagatgtgcagaaacttgaactcttaaacactgcttgtgacaatacgaaatggtgcagcctatg-------tgtaaaataattgggtgtgtcttcataaagttacaaataaatttaccatatgactcaatgattccattcctcggtatataccccaaagacctgaaaacaggtgttcaaacaaaaacctatatactctttaaatgtgtcaaggtcataaatatgcaggaaagtctggggaacagttccaggaaaagaaaactGGATCAGAATGAAAAAAAAAAAAAAC----CACATTATACTCCCAAGTGTT-CAGGAGGTAAAAGTGAAGTGAGTTTGTGGACTGAATTATCATGTAGGAACAATGCTGATTTCCTGATCTAGGAGTTACGTGGTAGTTACCTGGGATAGTATCCATGCATTCCATACAATATACCGGAGTATTTTGTGGGACACTGCAAATCTGGTACAGCGATAACTGTTGGGGAATCTAAGGGAAGAAACAAGT--TATACTTTGTACTTCTACTGGAAGTTCCCTAGAAATATGACATTATTGGCAAGTAAATTACTTTTTAAAACAACCATATCAATACCATGCCAGGAAAGCAGACACATCATCAAAATCCATTACAGAGGCTATAGTTCAGCCAAAGCTGTGAAACCCTTTAAAAAGTCTCAATGTCAACAGACTTCACTTAGTAGATATTATTACATTTATTAGTATTAGAGGCTACTGTGTGGATATACTA-----------GTGTTAG-----------------GGCACGGTATGGATATTTAGATAAGTGTTAGGGAATGGTGTGGATATTGTATTGGTGTT i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91744772 816 - 128169293 tgttaacaaagatgtgcagaaacttgaacccttaaacactgcttgtgacaatatgaaatggtgcagtctatg-------tgtaaaataatttggtgtttcttcaaacagttaccaatagatttacaatatgactcaatgattccattcctaggcatatatcccaaagacctgaagacaggtgttcaaacaaaaacttgtaTGCTCTTTAAATGTGTCAAGGTGACAAATATGCAGGACAGTCTGGGGAACAGTTCCAGGAAAAGAAAACTGGATCAGGATGGAAAAAAAAAAAAAAAACACACATTATACTCCTAGGtggggcaggaggtaaaagtgaaatgagattgtagactgcattatcatataggaaccatgctgatttcctgatctaggacttatttggtggttacctgggagagtgtctatactttgggtaaaatatactaaagtatttTGTGGGACATTGTAAATCTGGTACAGCAATAATTGCTGTGGAAGCTAAGAGAAGAAACAAGT--TATACTTTGTACTGCTACTGGAAGTTTCCTAGAAGTATGACATTATTGGAAAGTAAATAACTTTTTAAAACAACCATATCAATACCATGCCAGGAAAGCAGAGACCTCATCAAAATCCATTATAGAGGCTACAGTTCAGCCAAAGCTGTGAAATCCTTATAAAAGTCTCAATGTCAACAGAGTCCACTTTGTAGATATTATTACATTTATTAGTATTAGAGGCTATTGTGCAGATATATTA-----------GTGTTGT-----------------GGCATGGTGTGGATAT-TAGATTAGTGTTAGGGCATGATGTGGATATTTTACTGGTGTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26260310 821 + 36383700 tgttaacaaagatgtgcagaaacttgaacccttaaatgctgcttgtgacaatatgaaatggtgcagtatatg-------tgtaaaataatttggtgtttctacgaacagttacaaatagatttacaatatgactcaatgattcatttcctaggcatatattccaaagacatgaagacaggtgttcaaacaaaaacttgtaTGCTCTTTAAATGTGTCAAGGTGACAAATATGCAGGAAAGTTTGGGGAACAGTTCCAGGAAAAGAAAACTAGATCAGAATGAAAAA-------------ACACATTATACTCCCAGGTGGGGCAAGAGGTAAAAGTGAAATGAGTTTGTAGA----ATTATCATGTAGGAACCATGCTGATTTCCTGATCTAGGGGTTATGTGGTAGTTACCTGGGAGGCTGTCTGTACTTCGGGTAAAATATACTGAAGTATTTTGTGGGACACTGTAAATCTCGTACAGCAATAACTGCTGTGGAATCTAAGAGAAGAAACAGGT--TATACTTTGTACTGCTACTGGAAGTTTCCTAGAAGTATGACATTATTGGAAAGTAAATTACTTTTTAAAACAATCATATTAATACCATGTCAGGAAAGCAGAGACCTCATCAAAATCCATTATAGAGGCTATAGTTCAGCCAAAGCTGTAAAACCCTTATAAAAGTCTCCATGTCAACAGACTCCACTTTGTAGA---TGTTACATTTATTAGTATTAGAGGTTACTGTGTGGATATATTACCACTTTGTAGATGTTACATTTATTAGTATTAGAGGTTACTGTGTGGATAT----ATTAGTGTTACGGCATGGTGTGGATATTAGATTAGTGTT i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 362618 795 - 2125214 tgttggcaaagatgagcagaaacttgaacacttaaacactgtttgtgacaatatgaaatggtgtagcctatg-------tgtaaaagaatctggtgtttcttcaaacagttacaaatagatttaccatatgactcaatgattccattcctaggtatataccctaaagacctgaaaacacatgttcaaataaaaatttgtaTGTTCTTTAAATGTGTCGAGGTCATAAATATGCAGGAAAGTCTTGGAAACAGTTCCAGAAAAAGAAAGCCAGATCAGAATGAAAAA-------------ACACATTATACTCCTAGGTGGGGGAGGAggtaaaagtgaaatgagtttgtagactgaattatgatgtaggaaccacgccaatttcctgatctagggattatgtggtggttacctgggagagtgtctgtgctttgggtaaaatatattgaagtatttTGTGGGACACTGTAAATCTGGTATAGTAATAACTGCTGGAGAATCTAAGAGAAGAAACAGGT--TGTACTTTGTACTGCTACTGGAAGTTTCCTAGAAGTATAATATTATTGGAAA-CCAGTTATTTTTTAAAACGACCAT-----TTCCATGCCAGGAAAGCAGAGACATGATCAAAATCCATTATAGAGGCTACAGTTCAGTCAAAGTTGTGAGACCCTTATAAAAGTCTCAATGTCAACAGAGTCCTCTTAGTAGATATGATTATATTTATTGGTATTAGAGGCTACTGTGTGAATATATTA-----------GTGTTAT-----------------GGCATG--ATGGCTAT-TAGATTAGTGTTAGGGCATGGTGTGGATATGATTTTCGTGTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487315v1 5681815 792 - 15679484 tgttgagaaagatgtgcacaaacctg--ctattaaacactgcttgtgacaacatgaaatggtgcagcctatggtaaaatggtaaaataatttggtgtttcttcaaacagttacaaataggtttaccatatgtctcactcagttcattcctaggtatatacaccgaagacctgaaaataggtgttcaaacaaaaacttgtaTGCTCCTTAAATGTGTCAAGATCATAAACATGCAGGCAAGTCTTGGGAACAGTTCCAGGAAAAGAAAACTGGATCAGAATGAAAAA-------------ATACATTATACTCCCAGGTGGGGCAGGAGGTAAAAGTGAAATGAGTTTGTAGACTGAATTTTCATGTAGGAACCATGCTGCTTTCCTGATCTAGGGGTTATGTGGTGGTTACCTGGGAGAGTGTCTGTACTTTGGGTAAAATATTCT---GTATTT------ACACTGTAAATCTGGTACAGCAATAACTGATGGGGAATCTAAGAGAAGAAACAGGTTGTGTACTTTGTACTGCTACTGGAAGTTTCCTAGAAAC------TTACTGGAAAGTAAATTACTTTTTAAAACAACCATATCAATACCATGCCAGGAAAGCAGAGACCTCATCAAAATCCATTTTATAGGTTATAGTTCAGCCAAAGCTGTGAAACCCTTATAAAAGTCTCAATGTCAACAGAATCCACTTAGTAGA---TATTATATTTATTAGTATTAGAGGCTACTGTCTGGCTATATTA-----------GTGTTAC-----------------AGCATGGTGTGGATAT-TAGATTAGTGTTAGGGCATGGTGTGGATATTATATTGGTGTT i aotNan1.NW_018487315v1 C 0 C 0 e panTro5.chr17 10954 2191 + 83181570 I a score=2205.000000 s hg38.chr7_KI270899v1_alt 10391 3 + 190869 GGG s nomLeu3.chr20 29949 3 + 85365473 GGG i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378119 26261131 3 + 36383700 AGG i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 363413 3 - 2125214 GGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487315v1 5682607 3 - 15679484 AGG i aotNan1.NW_018487315v1 C 0 C 0 e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=1830.000000 s hg38.chr7_KI270899v1_alt 10394 5 + 190869 GAATG s nomLeu3.chr20 29952 5 + 85365473 GAATG i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 363416 5 - 2125214 AAATG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487315v1 5682610 5 - 15679484 GCATG i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378119 26261134 0 + 36383700 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=11148.000000 s hg38.chr7_KI270899v1_alt 10399 42 + 190869 GTGCAGATATTACATCAGTGTTAGGGCATGGTGTGGATATTA s nomLeu3.chr20 29957 42 + 85365473 GTGCAGATATTACATTAGTGTTAGGACATGGTGTGGATACTA i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 363421 42 - 2125214 GTGCAGATATTACATTAGTGTTAGGGCATGGTGTGGATATTA i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=55717.000000 s hg38.chr7_KI270899v1_alt 10441 703 + 190869 TTGCATTAGTATTAGAAGAGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTGGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGCACTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTACTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATCACATTAGTATTGGAAGCGATGCTGTGGACTAGATCAGTGATAGGGCATGGTGTGCATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTACATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGCATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGT s nomLeu3.chr20 29999 703 + 85365473 TTACATTAGTATTAGAAGCGATGGTGTAGATTAGATCAGTGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTAGATTAGATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTAGATTAGATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTGCATTAGT i nomLeu3.chr20 C 0 I 266 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=9341.000000 s hg38.chr7_KI270899v1_alt 11144 145 + 190869 ACTGGAAGCGATGGTGTGGACTAGATCAGTGATACGGCATGCTGTGGATATTATCACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGCATATTATTACATTAGTATTGGAAGCGATGGTGTGG s nomLeu3.chr20 30968 145 + 85365473 ATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGCGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTGCATTAGTATTAGAAGCGATGGTTTAG i nomLeu3.chr20 I 266 T 411 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=0.000000 s hg38.chr7_KI270899v1_alt 11289 44 + 190869 ATTACATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGC e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e nomLeu3.chr20 31113 411 + 85365473 T e panTro5.chr17 10954 2191 + 83181570 I a score=784.000000 s hg38.chr7_KI270899v1_alt 11333 11 + 190869 ATTGGAAGCGA s nomLeu3.chr20 30702 11 + 85365473 ATTAGAAGCAA i nomLeu3.chr20 T 411 C 0 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=24006.000000 s hg38.chr7_KI270899v1_alt 11344 160 + 190869 TGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTACTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATATTACTACATTAGTGTTGGAAGCG s gorGor5.CYUI01004482v1 0 107 - 30167 TGGTGTGGATTAGATCAGTGATAGG-CATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTA---------------------------------------------------- i gorGor5.CYUI01004482v1 N 0 C 0 s nomLeu3.chr20 30713 160 + 85365473 TGGTGCGGATTAGATCAGTGTCAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTGCATTAGTATTAGAAGCGATGGTTTAGATATTATTACATTAGTATTAGAAGTG i nomLeu3.chr20 C 0 T 906 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=0.000000 s hg38.chr7_KI270899v1_alt 11504 11 + 190869 ATGGTGTGGAT e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e nomLeu3.chr20 30873 906 + 85365473 T e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 107 0 - 30167 C a score=12093.000000 s hg38.chr7_KI270899v1_alt 11515 80 + 190869 TACATCAGTGATAGGGCATGGTGTGGATATTATTGCATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGC s gorGor5.CYUI01004482v1 107 45 - 30167 -----------------------------------CATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGC i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 29967 80 + 85365473 TACATTAGTGTTAGGACATGGTGTGGATACTATTACATTAGTATTAGAAGCGATGGTGTAGATTAGATCAGTGTTAGAGC i nomLeu3.chr20 T 906 I 826 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=8665.000000 s hg38.chr7_KI270899v1_alt 11595 35 + 190869 ATGGTGTGGATATTATTACATTAGTATTGGAAGCG s gorGor5.CYUI01004482v1 152 35 - 30167 ATGGTGTGGATATTATTACATTAGTATTGGAAGCG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 30873 35 + 85365473 ATGGTTTAGATATTATTACATTAGTATTAGAAGTG i nomLeu3.chr20 I 826 T 826 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=7070.000000 s hg38.chr7_KI270899v1_alt 11630 28 + 190869 ATGGTGTGGACTAGATCAGTGATAGGGC s gorGor5.CYUI01004482v1 187 28 - 30167 ATGGTGTGGACTAGATCAGTGATAGGGC i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 30082 28 + 85365473 ATGGTGTGGATTAGATCAGTGTTAGAGC i nomLeu3.chr20 T 826 I 798 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=8421.000000 s hg38.chr7_KI270899v1_alt 11658 35 + 190869 ATGGTGTGGATATTACTACATTAGTATTGGAAGCG s gorGor5.CYUI01004482v1 215 35 - 30167 ATGGTGTGGATATTATTACATTAGTATTGGAAGCG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 30908 35 + 85365473 ATGGTTTAGATATTATTACATTAGTATTAGAAGTG i nomLeu3.chr20 I 798 T 798 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=6210.000000 s hg38.chr7_KI270899v1_alt 11693 28 + 190869 ATGGTGTGGACTAGATCAGTGATAGGGC s gorGor5.CYUI01004482v1 250 28 - 30167 ATGGTGTGGACTAGATCAGTGATAGGGC i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 30145 28 + 85365473 ATGGTGTGGATTAGATCAGGGTTAGACC i nomLeu3.chr20 T 798 I 770 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=31762.000000 s hg38.chr7_KI270899v1_alt 11721 139 + 190869 ATGGTGTGGATATTACTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATAT s gorGor5.CYUI01004482v1 278 138 - 30167 ATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGAT-AGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATTT i gorGor5.CYUI01004482v1 C 0 I 24 s nomLeu3.chr20 30943 139 + 85365473 ATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGCGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATAT i nomLeu3.chr20 I 770 C 0 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=1690.000000 s hg38.chr7_KI270899v1_alt 11860 22 + 190869 TACTACATTAGTATTGGAAGCG s nomLeu3.chr20 31082 22 + 85365473 TATTGCATTAGTATTAGAAGCG i nomLeu3.chr20 C 0 T 770 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 416 24 - 30167 I a score=2198.000000 s hg38.chr7_KI270899v1_alt 11882 28 + 190869 ATGGTGTGGACTAGATCAGTGATAGGGC s nomLeu3.chr20 30334 28 + 85365473 ATGGTGTGGATTAGATCAGTGTTAGAGC i nomLeu3.chr20 T 770 I 742 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 416 24 - 30167 I a score=3296.000000 s hg38.chr7_KI270899v1_alt 11910 45 + 190869 ATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGA s nomLeu3.chr20 31104 45 + 85365473 ATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAGA i nomLeu3.chr20 I 742 T 742 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 416 24 - 30167 I a score=2076.000000 s hg38.chr7_KI270899v1_alt 11955 28 + 190869 CTAGATCAGTGACAGGGCATGGTGTGGA s nomLeu3.chr20 30407 28 + 85365473 TTAGATCAGTGTTAGAGCATGGTGTGGA i nomLeu3.chr20 T 742 I 714 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 416 24 - 30167 I a score=2076.000000 s hg38.chr7_KI270899v1_alt 11983 25 + 190869 TATTATTACATTAGTATTGGAAGCG s nomLeu3.chr20 31149 25 + 85365473 TATTATTACATTAGTATTAGAAGTG i nomLeu3.chr20 I 714 T 714 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 416 24 - 30167 I a score=12968.000000 s hg38.chr7_KI270899v1_alt 12008 167 + 190869 ATAGTGTGGACTAGGTCAGTGTTAGGGCACGGTGTGGATATTACTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCACGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTTTATTAGATCAGTGATAGGGCACGGTGTGGATAT s nomLeu3.chr20 30460 167 + 85365473 ATGGTGTAGATTAGATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTAGATTAGATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATAT i nomLeu3.chr20 T 714 C 0 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 416 24 - 30167 I a score=49227.000000 s hg38.chr7_KI270899v1_alt 12175 211 + 190869 TATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTACTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTACTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTACTACATTAGCATTGGAAGCG s gorGor5.CYUI01004482v1 440 210 - 30167 TATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTA-TACATTAGTATTGGAAGCG i gorGor5.CYUI01004482v1 I 24 C 0 s nomLeu3.chr20 30627 211 + 85365473 TATTGCATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGCGGATTAGATCAGTGTCAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTGCATTAGTATTAGAAGCG i nomLeu3.chr20 C 0 T 63 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=6210.000000 s hg38.chr7_KI270899v1_alt 12386 28 + 190869 ATGGTGTGGACTAGATCAGTGATAGGGC s gorGor5.CYUI01004482v1 650 28 - 30167 ATGGTGTGGACTAGATCAGTGATAGGGC i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 30775 28 + 85365473 ATGGTGTGGATTAGATCAGGGTTAGACC i nomLeu3.chr20 T 63 I 371 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=10567.000000 s hg38.chr7_KI270899v1_alt 12414 44 + 190869 ATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG s gorGor5.CYUI01004482v1 678 44 - 30167 ATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31174 44 + 85365473 ATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAG i nomLeu3.chr20 I 371 C 0 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=5829.000000 s hg38.chr7_KI270899v1_alt 12458 89 + 190869 ATATTACTACATTAGTGTTGGAAGCGATGGTGTGGATTACATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCG s nomLeu3.chr20 31218 89 + 85365473 ATATTATTACATTAGTATTAGAAGTGATGGTTTAGATATTATCAGGGTTAGAGCATGGTTTAGATATTATTGCATTAGTATTAGAAGCG i nomLeu3.chr20 C 0 T 1225 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=2320.000000 s hg38.chr7_KI270899v1_alt 12547 28 + 190869 ATGGTGTGGATTAGATCAGTGATAGGGC s nomLeu3.chr20 30082 28 + 85365473 ATGGTGTGGATTAGATCAGTGTTAGAGC i nomLeu3.chr20 T 1225 I 1197 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=2564.000000 s hg38.chr7_KI270899v1_alt 12575 35 + 190869 ATGGTGTGGATATTATTACATTAGCATTGGAAGCG s nomLeu3.chr20 31307 35 + 85365473 ATGGTTTAGATATTATTACATTAGTATTAGAAGTG i nomLeu3.chr20 I 1197 T 1172 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=0.000000 s hg38.chr7_KI270899v1_alt 12610 25 + 190869 ATGGTGTGTACTAGATCAGTGTTAG e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e nomLeu3.chr20 31342 1172 + 85365473 T e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=13651.000000 s hg38.chr7_KI270899v1_alt 12635 192 + 190869 GGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGTTGTGGATTACATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGCATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTACTACATTAGTATTGGAAGTGATGTTGTGTATTAGATCAGTGATACGGC s nomLeu3.chr20 30170 192 + 85365473 ACCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGC i nomLeu3.chr20 T 1172 I 980 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=7140.000000 s hg38.chr7_KI270899v1_alt 12827 98 + 190869 ATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCG s nomLeu3.chr20 31342 98 + 85365473 ATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGTG i nomLeu3.chr20 I 980 T 980 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=2320.000000 s hg38.chr7_KI270899v1_alt 12925 28 + 190869 ATGGTGTGGATTAGATCAGTGATAGGGC s nomLeu3.chr20 30460 28 + 85365473 ATGGTGTAGATTAGATCAGTGTTAGGGC i nomLeu3.chr20 T 980 I 952 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=2686.000000 s hg38.chr7_KI270899v1_alt 12953 35 + 190869 ATGGTGTGGATATTATTACATTAGTATTGGAAGCG s nomLeu3.chr20 31440 35 + 85365473 ATGGTTTAGATATTATTACATTAGTATTAGAAGTG i nomLeu3.chr20 I 952 T 952 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=2198.000000 s hg38.chr7_KI270899v1_alt 12988 28 + 190869 ATGGTGTGGACTAGATCAGTGATAGGGC s nomLeu3.chr20 30523 28 + 85365473 ATGGTGTAGATTAGATCAGTGTTAGGGC i nomLeu3.chr20 T 952 I 924 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=2016.000000 s hg38.chr7_KI270899v1_alt 13016 44 + 190869 ATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGTTGTCA s nomLeu3.chr20 31475 35 + 85365473 ATGGTTTAGATATTATTACATTAGTATTAGAAGTG--------- i nomLeu3.chr20 I 924 C 0 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I e gorGor5.CYUI01004482v1 722 0 - 30167 C a score=31597.000000 s hg38.chr7_KI270899v1_alt 13060 226 + 190869 ACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTA s gorGor5.CYUI01004482v1 722 226 - 30167 ACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31510 123 + 85365473 -------------------ATGGTTTAGATATTATTACATTAGTATTAGAAGTG----------------------------ATGGTTTAGATATTATTACATTAGTATTAGAAGTG----------------------------ATGGTTTAGATATTATTACATTAGTATTAGAAGTG----------------------------ATGGTTTAGATATTATTA i nomLeu3.chr20 C 0 C 0 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e cebCap1.NW_016107703v1 363463 0 - 2125214 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=8315.000000 s hg38.chr7_KI270899v1_alt 13286 43 + 190869 CATTAGTATTGGAAGCGATGTTGTGG--ATTACATCAGTGTTAGC s gorGor5.CYUI01004482v1 948 43 - 30167 CATTAGTATTGGAAGCGATGGTGTGG--ATTACATCAGTGTTAGG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31633 17 + 85365473 CATTAGTATTAGAAGTG---------------------------- i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 363463 45 - 2125214 CATAAGTATTAGAAGCGATGGTGTGGATATTAGATTAATGTTAGG i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261134 0 + 36383700 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=31666.000000 s hg38.chr7_KI270899v1_alt 13329 56 + 190869 GCATGGTGTGAATATTATATAGGTGTTAGGGCACGGTGTAGATATCATAGTAATGT s gorGor5.CYUI01004482v1 991 56 - 30167 GCATGGTGTGGATATTATATGGGTGTTAGGGCACGGTGTGGATATCATAGTAATGT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31650 54 + 85365473 --ATGGTGTGGATATTATACTGGTGTTAGGGCACGGTGTGGATATCACAGTAATGT i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378119 26261134 35 + 36383700 GCATGGTGTGGATATTATATTGGTGTTAGGGCACG--------------------- i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 363508 56 - 2125214 GTATGGCGTGGCTACTATATTGATGTTAAGACACGGTGTAGCTATCATATTAATGT i cebCap1.NW_016107703v1 C 0 I 1 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e calJac3.chr8 91745588 0 - 128169293 C e panTro5.chr17 10954 2191 + 83181570 I a score=1044.000000 s hg38.chr7_KI270899v1_alt 13385 8 + 190869 AGAGCAC---------------------A s gorGor5.CYUI01004482v1 1047 8 - 30167 AGGGCAC---------------------A i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31704 29 + 85365473 AGGGCACATGACTACACAGTAATGTAATA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91745588 8 - 128169293 AGGGCAT---------------------G i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 363565 8 - 2125214 AAGGCAT---------------------G i cebCap1.NW_016107703v1 I 1 C 0 e aotNan1.NW_018487315v1 5682615 0 - 15679484 C e saiBol1.JH378119 26261169 0 + 36383700 C e panTro5.chr17 10954 2191 + 83181570 I a score=864182.000000 s hg38.chr7_KI270899v1_alt 13393 603 + 190869 GTGTGATTATTATATTAGAGGCCACTGTAAGAATATATATTAGCAGCCACTGTGTCTTGGACGTTGACAATGATATTAGGGTGTACTCCAAATAGTGAGATTTGGGGGCTTTATTTTTCTAGATGAATTTCTTCCTCTGCTGAGTGCTCTAA--AGACTCACTCCTTGGCACTCAGGGCCGTGGACAGG-AGCTTTTTACTCACCAATGAAGAACACCAAATTAACACGACCCCCGTGCTGCCCTGAGGAAGTTGAAGCTCCTCGCTGCTTCTGGCACTTCAGCGGGAAGTTGGTT-GGGGCGGGATCGCGCGCCCTCTGGTGGCGCCATGGTTCAGCACAGACGCTCTTGCTCACAGTTTCTCGGCGGATGTG---CGCCCCCTCCTGGCTGTCCTGAAATACCTATAAAATTCAATATTCAGTTTATTCAGTGTCATAATTTTGGAAATTCAAACCGAAATAAAGGCCAGTATATCCATACccttcccataaatggtgatggaagaattatttggaagccatatagaatgaaatgactctatacacaaagtaaaacac-----------------------------------------aaaaacctactcaaaatagtccagagactacaacttcaaatgcaaaacta- s gorGor5.CYUI01004482v1 1055 600 - 30167 GTGTGATTATTATATTAGAGGCCACTGTAAGAATATATATTAGCAGCCACTGTGTCTTGGACGTTGACAATGATATTAGGGTGTACTCCAAACAGTGAGATTT-GGGGTTTTATTTTTCTAGATGGATTTCTTCCTCTGCTGAGTACTCTAA--AGACTCACTCCTTGGCACTCAGGGCCGTGGACAGG-AGCTTTTTACTCACCAATGAAGAACACCAAGTTAACACGACCCTCGTGCTGCCCTGAGGAAGTTGAAGCTCCTCGCTGCTTCTGGCACCTCCGCGGGAAGTTCGTT-GGGGCGGGATCGCGCGCCCTCTGGTGGCTCCGTGGTTCAGCACAGACGCTCTTGCTCACAGTTTCTCGGCGGATGTG---CGCCCCCTCCTGGCTGTCCTGAAATACCTATAAAATTCAATATTCAGTTTATTCAGTGTCATAATTTTGGAAATTCAAACCGAAATAAAGGCCACTATATCCATACccttcccataaatggtgatggaagaattatttggaagcca-atggaatgaaatgactctatacacaaattaaaacac-----------------------------------------aaaaacctactcaaaatagtccagagactacaacttcaaatgcaaaact-- i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 31733 644 + 85365473 ATGTGATTATTATATTAGAGGCCACGGTAAGAATATATATTAGCAGCCACTGTGTCTTGGACGTTGACAATGATATCAGGGTGTGCTCCAAACAGTGAGATTTGGTGGTTTTATTTTTCTAGATGAATTTCTTCCTCTGCTGAGTACTCTAA--AGACTCACTCCTCGGCACTCAGGGCCGTGGACAGGAAGCTTTTTACTCACCAATGAAGAACACCAAGTTAACACGACCCTCGTGCTGCCCTGAGGAAGGTGAAGCTCCTCGCCGCTTCTGGCACCTCAGCGGGAAGTTGGTT-GGGGCGGGATCGCGCGCCCTCTGGTGGCGCCATGGTTCAGCACAGACGCTCTTGCTCACAGTTTCTCGGCGGATGCG---CGCCCCCTCCTGGCTGTCCTGAAATACCTATAAAATTCAATATTCAGTTTATTCAGTGTCATAATTTTGGAAATTCAAACCAAAATAAAGTCCACTATATCCATATCCTTCCCATAAATGGTGATGGAAGAATTATTTGGAAGCCATATAGAATAAAATGAGTGCATACACAAATTAAAACACAAAAACCTAAAACTTAAAGTATAATAATAAAAAAATTTAAAaaaaacctactcaaaatagtccagagactataatttcaaatgcaaaact-- i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91745596 599 - 128169293 GTGTGATTACTATATTAGAGGCCACTGTGACAATATATATTAGCAGCCACTGTGTCTTGGACACTGACA---ATATCAGGGTCTAGTCAAAACAGTGGGATTTAAGGGTTTCATTTTTCTAGATGGATTTCTTCCTCTGCTGAGTACTCTCT--AGACTCTCTCCTCTGTACTCAGGGCGGCGGACAGGAAGCTTTTTACCCACCAATAAACAACACCAAGTTGACAAGACCCCCATGCTGCCCTGAGGAAGATAAAGCTCCTTGCTGCTTCTGGCACCTCAGAGGGAAGTTGGTCAGGAGTCCGTGCATGCCCCCTCTGGTGGCACCAGGGCTCAGCACAGA------TGCTCACAGTTTCACAGCGGATGTGCACCTCTCCCCCACAGATGTCCTGAAATACCTATAAAATTCAATATTCAGTTTATTCAATGTCATAATTTTGGAAATTCAAACTAAAATGAAGCTCACTATAACCATAtccttccaaaaaatggtgatggaagaattatttggaagccatatagaatgaaatgaatgtacacacaaattaaaacac-----------------------------------------aaaaacctactcaaaacagtccagagactataacttaaaatgcaaaact-a i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26261169 591 + 36383700 GTGTGATTACTATATTAGAGGTCACTGTGAGAATATATACTAGCAGCCACTGTGTCTTGGACACTGACA---ATATTAGGGTATAGTCAAAACAGTGAGATTTGAGGGTTTCATTTTTCTAGGTGAATTTCTTCCTCTGCCGAGTACTCTCTAAAGACTCTGTCCTCTGCACTCAGGGCAGTGGACAAGAAGCTTTTTACTCACCAATAAATGACACCAAGTTGACATG------ATGCTGCTGTGAGGAAGATAAAGCTCCTTGCTGCTTCTGGCACCTCAGAGGGAAGTTGGTCAGGAGTGGGTACATGCATCCTTTGGAGGCACCAGCGCTCAGCACAGACGCTGTTGCTCACAGTTTCTTGGTGGATATG----TGTCCCCCCTAGTTGTCCTGAAATACCTATAAAATTCAATATTCAGTTTATTCAATGTCATAATTTTGG-AATTCAAACTGAAATGAAGCCCACTATAACCatatccttcccaaaaatggtgatggaagaattatttggaagccatatagaatga----aatgtatacacaaatt-aaacat-----------------------------------------aaaaacctactcaaaacagtccagagaatataattgaaaatgcaaaact-a i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 363573 566 - 2125214 GTGTGATTATTATATTAGAGGCCACCGTGAGAACATGTATT---AGCCACTGTGTCTTGGACGTTGATAATGATATCAGGGAATAGTCAAAACAGTGGGATTTGGGGGTTTCATTTTT-----TGAATTTCTTCCTCTGCTGAGTACTCTAA--AGACTCTCTCCTCTGCACTCAGGGCTGTAGACAGGAAGCTTTTTACTCACCAATGAACGACACCAAGTTGACACGACCCTCATGCTGCCCTGAGGAAGATAAAGCTCCTGGCTGCTTTTGACACCTCAGAGGGAAGCTGGTCGGGGGTGGGTTCGTG----------------------------CAGACGCTCTTGCTCACAGTTTCTCGGCAGAGGTG---CGCCCCCTCCTGGCTGTCCTGAAAT-CCTATAAAATTCAATATTCAGTTTTTTCAGTGCCATAATTATGGAAATTCAAACCGAAATGAAGCCCACTATATCCatatccttcccaaaactggtgatggaagaatcacttggaagccatatagaatgaaatgaatgtatacacaaattaaaacac------------------------------------------aaaacctactcaaaatagtccagagactataatttaaaatgc-aaact-a i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487315v1 5682615 598 - 15679484 GTGTCATCATTATATTAGAGGCCACTGTGAGAATATATATTAGCAGCCACTGTGTCTTGGACATTGACA---ATATCAGAACATAGTCTAAACAGTGGGATTCGAGGGTTTCATTTTTCTAGATCAATTTCGTTCTCTGCTGAGTACTCTAA--AGACTCTGTCCTCTGCACTCAGGGCTGTGAAAAGGAAGCTTTTTACTCACCAATGAACGACACCAAGATGACATGACCCTTGCACTGCAGGGAGGAAGATAAAGCTCCTTGCTGCTTCTGGCAACTCAAAGGGAAGTTGGTC-GGGGTGGTTTCTCATGACCTCTGGTGGCACCAGGGTTCAGCACAGATGCTCCTGCTCACAGTTTCTCGGTGGACGTG---CACCCCCTCCTGGTTGTCCTGAAATACCTATAAAATTCAATATTCAGTTTATTCAGTGTCATACTTTCGGAAAGTCAAACTAAAATGAAGCCCGCTATATCCatattcttcccaaaaatggggatggaagaattatttggaagccatatagaatgaaatgaatgtacacacaaattaaaacac-----------------------------------------aaaaac---ctcaaaatagtccacagactgtaattggaaatgcaaaact-a i aotNan1.NW_018487315v1 C 0 C 0 e panTro5.chr17 10954 2191 + 83181570 I a score=962740.000000 s hg38.chr7_KI270899v1_alt 13996 584 + 190869 taaata-----------------atctaaaagaaaacctaagagacattggatctggtgttgagttttaacacacagcatcaagtgccaattcgtgaaaatactgaga--aca-----gactttataaaactaaattttctactatgaaaaaccctattcagagaacaaaaagacaagacaca---------------ctgtcagaagata--------tttacaaaatacaaacgtgattttaaaaactgtattgaaaatacacaaagaactcttcaaacgaacact--aagaaaactaaaaacccaaataaaactgggtaaatatctgaacagacatccagccaaagaaaatatatagatagca----ggc---------------caggtgtggtggctcatgcctataaccccaggactttgggaggctgaagcgggtgagtcacctgaggtcaggaatttgagatcagcctggccaacatagtgatacc--------ccctctctactaaaa--atacaaaaaaattagccaggcatggtggtgggtgcctgtaatcccagctacttgggaggctgatgcaagagaattgcttgaacat---cggaggtggaggttgcagtgacccaagatcacgccactgcactccagcctgagtgaca s panTro5.chr17 13145 584 + 83181570 Taaata-----------------atctaaaagaaaacctaagagacattggatcttgtgttgagttttaacacacagcatcaagtgccaattcgtgaaaatactgaga--aca-----gactttataaaactaaattttctactatgaaaaaccctattcagagaacaaaaagacaagacaca---------------ctgtgagaagata--------tttacaaaatacaaacgtgattttaaaaactgtattgaaaatacacaaagaactcttcaaacgaacact--aagaaaactaaaaacccaaataaaactgggtaaatatctgaacagacatccagccaaataaaatatatagatagcc----ggc---------------caggtgtggtggctcatgcctataaccccagcactttgggaggctgaggcgggtgagtcacctgaggtcaggaatttgagatcagcctggccaacatagtgatacc--------ccctctctactaaaa--atacaaaaaaattagccaggcatggtggtgggtgcctgtaatcccagctacttgggaggctgatgcaagagaattgcttgaacat---tggaggtggaggttgcagtgacccaggatcatgccactgcactccagcccgagtgaca i panTro5.chr17 I 2191 C 0 s gorGor5.CYUI01004482v1 1655 580 - 30167 ---ata-----------------atctaaaagaaaacctaagagacattggatctggtgttgagttttaacacacagcatcaagtgccaattcgtgaaaatactgaga--aca-----gactttataaagctaaattttctactatgaaaaaccctattcagagaacaaaaagacaagacaca---------------ctgtgagaagata--------ttta-aaaatacaaacgtgattttaaaaactgtattgaagatacacaaagaactcttcaaacgaacact--aagaaaactaaaaacccaaataaaactgggtaaatatctgaacagacatccagccaaataaaatgtatagatagca----ggc---------------caggtgtggtggctcatgcctataaccccagcactttgggaggctgaggcgggtgagtcacctgaggtcaggaatttgagatcagcctggccaacatagtgatacc--------ccctctctactaaaa--atacaaaaaaattagccacgcatggtggtgggtgcctgtaatcccagctacttgggaggctgatgcaagagaattgcttgaacat---cggaggtggaggttgcagtgacccaagatcacgccactgcactccagcctgagtgaca i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 32377 582 + 85365473 ---ata-----------------atctaaaggaaaacctaagtgacactggagttggtgttgagttttaacacatagcatcaaatgccaattcgtgaaaatactgagaacaca-----gactttataaaactaaattttctactgtgaaaaaccctattcagagaacaaaaacacaggacaca---------------ctttgagaagata--------tttacaaaatacaaacgtgattttaaaaactgtactgaaaatacacaaagaactcttcaaaggaacact--aagaaaactaaaaaccc-aataaaactgggtaaatatatgaacagacacccagcaaaagaaaatgtatagatagca----ggc---------------caggtgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtgagtcacctgaggttaggaattcgagatcagcctggccaacatagtgatacc--------ccctctctactaaaa--atac-aaaaaattagccaggcgtggtggtgggtgcctgtaatcccacctacttgggaggctgatgcaggagaatggcttgaacat--gggggggtggaggttacagtgagccaaaatcccgccactgcactccagcctgagtgaca i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91746195 527 - 128169293 taaaaa-----------------atcaaaaataaaatctatgtaatattgggtttggtgttgagttttaacacacaacatcaaacaccaattcatgaaaatattcata--acacagaagactttataaaactcaattctctactgtgaaaaatcttattcagag---aaaaagacaagacaga---------------ctgtgagaagaca--------tttacaaaatacatatgtgatttgaaaaactgtattgaaaatacacaaataactctttaaaggaacact-----------aaaaat----tttaaact-----------------------------------------------------ggc---------------tggacacagtggctcacacctgcagtcccagcactttaggaagccgaggcaggcagatca--tgaggtcaggagttcaaaaccagactgggtggtatagtaaaccccccccccaccatctctactaaa---atac-aaaaaattagccaggcaaggtggcatgcaattgtaatcccagctacttggtaggctgaggt-ggaaaattgcttgaacca---agggagcagagattgtactgagccaaaattctgccactgcacttcagcctgcgtgaca i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26261760 524 + 36383700 taaaaa-----------------aacaaaaagaaaatctatgtgacattgggtttggtgttgagttttaacacacaacatcaaacaccaattcatgaaaatattcata--aca-------------------caattttctactatgaaaaatcctattcagagaacaaaaagacaagataaaaatatgtattttactctgt-aaaatacatatgtaattttacaaaatacatatgtaatttt-taaactgtattgaaaatacacaaataactcttcaaaggaacact-----------aaaaat----tttaaact-----------------------------------------------------ggc---------------tgggcacagtggctcacacctgtagtcccagcactttgggagcctgaggagggcagatca--cgaggtcaggagttcaaaaccagcctgggcaacatggtgaaacc--------ctgtctctactaaa---atac-aaaaaa-tagccaggcatggtggcacgcaactgtaatctcagctacttgggaggctgaggtgggaaaattacttaaacca---aggaggcagagattgtagtgagccaaaattttgccactgcattccagcccgggtgaca i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 364139 579 - 2125214 taaaag-----------------atctaaaagaaaatctatgtgacactggggttggtgttgagttctaacatataaaatcaaatgccaattcgtgaaaatgttcata--aca---cagactttacaaaactcaattttcttctgtgaaaaatcctatccagagaacaaaaagacaagacaga---------------ctgtgagaagata--------tttacaaaatacatatgtgattttaaaaactgtattaaaaatacacaaagaactcttcaaaggaacact--aaaataaccaaaaac----cccagactgggtaagtacctgaactgacacccagccaaagaaaata----------atccaggc---------------gaggcgtgatgactcatgactgtaatcccagtactctgggagactaaagcaggtggatcatctggggtcaggaattcaagatcagcctggccaacatggtgaaacc--------ccctctctactaaaaatattt-taaaaa-tagccaggcatggtggttggtgcctgtaatcccagctacttgggcagctgaggcaaaataattgcttgaacaagagaggaggtggaggttgcagtgagcagaaactgcaccactgcactccagcctgggtgaca i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487315v1 5683213 619 - 15679484 taaaaatagttttttttagttttgtcacaaagaaaatctatgtgacattgcatttgctgttgacttttaacacac---atcaagtgtcaattcatgaaaatattcata--aca---tggactttataaaactcaattttctactgtgaaaaatcctattcagagaacaaaaagacaagacaga---------------ctgtgagaagata--------tttacaaaatacttatgtgattttaaaaactgtattgaaaatacataaagaactcttcaaaggaacactgaagaaaaactaaaaacccaattaaaactggataaatatctgagcagacacctagccaaagaaaatacacagagagcatggtggctcatgcttgtaatgatgggcatggtggcccaggcctgtaatcccagaactttgggaggctgaggcaggcagatcacctaaggtcaggagtttgagatcggccttgccaacatggcgaaacc--------cc-cctctactaaaa--atac-aaaacattagccaggtatggtggtgggcacctgcaatcctagctacttgggaggctgaggcaaaagaattgcttgaacac---gggaggcagaggttgcaatgagttgagatcgcaccactacactacagcctgaatgacg i aotNan1.NW_018487315v1 C 0 I 13 a score=29602.000000 s hg38.chr7_KI270899v1_alt 14580 33 + 190869 gaacgagactctatctcaataaaataa--------------aaaaaa s panTro5.chr17 13729 28 + 83181570 gaacgagactctatctcaataaaa-------------------aaaa i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 2235 44 - 30167 gaacgagactctatctcaataaaaaaa---aaagaaaaaagaaaaaa i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 32959 47 + 85365473 gaacgagactccatctccattaaaaaataaaaagaaaaaagaaaaaa i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91746722 33 - 128169293 gagtgaaactccatttcaaaataaaaa--------------aaaaaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26262284 33 + 36383700 gagtgagactctatctccaaaaaaaaa--------------aaaaaa i saiBol1.JH378119 C 0 I 1323 s cebCap1.NW_016107703v1 364718 33 - 2125214 gagtgagaagctgtctcaaaataaata--------------aataaa i cebCap1.NW_016107703v1 C 0 I 14 e aotNan1.NW_018487315v1 5683832 13 - 15679484 I a score=1523.000000 s hg38.chr7_KI270899v1_alt 14613 4 + 190869 aaga s panTro5.chr17 13757 4 + 83181570 aaga i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 2279 4 - 30167 aaga i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 33006 4 + 85365473 acca i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91746755 4 - 128169293 acta i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 364765 4 - 2125214 acca i cebCap1.NW_016107703v1 I 14 C 0 e aotNan1.NW_018487315v1 5683832 13 - 15679484 I e saiBol1.JH378119 26262317 1323 + 36383700 I a score=6360.000000 s hg38.chr7_KI270899v1_alt 14617 4 + 190869 aaat s panTro5.chr17 13761 4 + 83181570 aaat i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 2283 4 - 30167 aaat i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 33010 4 + 85365473 aaat i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91746759 4 - 128169293 aaat i calJac3.chr8 C 0 I 1327 s cebCap1.NW_016107703v1 364769 4 - 2125214 aaaa i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018487315v1 5683845 4 - 15679484 aaat i aotNan1.NW_018487315v1 I 13 C 0 e saiBol1.JH378119 26262317 1323 + 36383700 I a score=1057117.000000 s hg38.chr7_KI270899v1_alt 14621 969 + 190869 atactgatagcacataatcacacaaaaggatgctcaatat---atctcattaggagactgcaaattaaaataatgctgagatatcactgcacacctagtacaactgtgggactct-t-aaaaaagctcaacagtaacaattggaggttgaagaacaataggtacggccattcattactggcagaatgcatgaatgggtacagccactttgggaaatagtttgacagtttttcccaaagataaacaagtgttaccttacaatccaacaaatgcacccctaaattgtg-tatgtttagacagctgctttgaaaaattatgttcaaacaaaaactagcatgtaattatatacgagccactctactcataatggccaaaacttgaagtagtcagaacgttcttcaatagctgaatgcataatcaatttgaagtacaaccatgcaatggaata-ccattcaccaacagaaaggaatgaactgtcaatccatgaaaacaaatgaatgaatcttgcatctatgttgctaagtaaagggtggcagtatgaagatgctatacattatatgactccattcatataacattctggaaaaagcacaaccaaagagatgatagtcagatcagtgactgt-ctggggtggggatttgaagtattctgtatgctacttcagtagtggatatctgacactatgcatttgataaaacccacagaattttaatgcacaaagaacaaatcacaagctacacaaattaaattatttaggatgtggaagtatataaggacaaaatacagagtgcaaccaagaatctaactgtattaccaatgtatgttgcaagtggtgggccaaaggtgctga----------gctggaaatgagtagaatccatacactaaaaacaaaacgtactatatacacgaacagtggactctattttataaagttatttcccatagggataatagttaattttgaaactactatatCtgtaa s panTro5.chr17 13765 963 + 83181570 atacagatagcacataatcacacaaaaggatgctcaatat---atctcattaggagactgcaaattaaaataatgctgagatatcactgcacacctagtacaactgtgggactct-t-aaaaaagctcaacagtaacaattggaggttgaagaacaataggtacggccattcattactggcagaatgcatgaatgggtacagccactttgggaaatagtttgacagtttttcccaaagataaacaagtcttaccttacaatccaacaaatgcacccctaaattgtg-tatgtttagacagctgctttgaaaaattatgttcaaacaaaaactagcatgtaattatatacgagccactctactcataatggccaaaacttgaagtaatcagaacgttcttcaatagctgaatgcataatcagtttgaagcacaaccatgcaatggaata-ccattcaccaacagaaaggaatgaactgtcaatccctgaaaacaaatgaaagaatcttgcatctatgttgctaagtaaagggtggcagtatgaagatgctatatattatatgactccattcacataacattctggaaaaagcacaaccaaagagatgatagtcagatcagtgactgt-ctggggtggggatttgaagtattctgtatgctacttcagtagtggatatctgacactatgcatttgataaaacccacagaattttaatgcacaaagaacaaatcacaatctacacaaattaaattatttaggatgtggaagtatctaaggacaaaacacagagtgcaaccaagaatctaactatattaccaatgtatgttgcaagtggtgggccaaaggtgctga----------gctggaaatgagtagaatccacagactaaaaacaaaacgtactatatacacgaacagtggactctgt-----aaagttatttcccatagggataatagttaattttgaa-ctactataTCtgtaa i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 2287 967 - 30167 atacagatatcacataatcacacaaaaggatgctcaatat---atctcattaggagactgcaaattaaaataatgctgagatatcactgcacacctagtacaactgtggtactct-t-aaaaaagctcaacagtaacaattggaggttgaagaacaataggtacggccattcattactggcagaatgcatgaatgggtacagccactttgggaaatagtttgacagtttttcccaaagataaacaagtcttaccttacaatccaacaaatgcacccctaaattgtg-tatgtttagacagctgctttgaaaaattatgttcaaacaaaaactagcatgtaattatatacgagccactctactcataatggccaaaacttgaagtaatcagaacgttcttcaatagctgaatgcataatcaatttgaagtacaaccatgcaatggaaca-ccattcaccaacagaaaggaatgaactgtcaatccatgaaaacaaatgaatgaatcttgcatctatgttgctaagtaaagggtggcagtatgaagatg-tatacattatatgactccattcatataacattctggaaaaagcacaaccaaagagatgatagtcagatcagtgactgt-ctggggtggggatttgaagtattctgtatgctgcttcagtagtggatatctgacactatgcatttgataaaacccacagaattttaatgcacaaagaacaaatcacaatctacacaaattaaatgatttaggatgtggaagtatctaaggacaaaatacagagtgcaaccaagaatcgaactgtattaccaatgtatgttgcaagtggtgggccaaaggtgctga----------gctggaaatgagtagaatccatagactaaaaacaaaacgtactatatacac-aacagtggactctattttataaagttatttcccatagggataatagttaattttgaaactactatatCtgtaa i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 33014 968 + 85365473 atacagatagcacataatcacacaaaaggatgctcaatat---atctcattaggagactgcaaattaaaataatgctgagatatcactgcacacctagtagaactgtgggactct-taaaaaaagctcaacaataacaactggagattgaagaacaataggtacggtcattcattgctggcagaatgcatgaatgggtacagccactttgggagatagtttggcagtttttcccaaagataaacaagtcttaccttacaatccaacaaatgcacccctaaattgta-tatgtttagacagctgctttgaaaaattatgttcaaacaaaaactagcatgtaattatatacaagccactctactcataatggccaaaatttaaagtaatcagaacgttctacaatagctgaatgcataatcaatttgaagtacaaccatgcaatggaata-ccattcagcaacagaaaggaatgaactgtcaatccatgaaaagaaatgaacgaatcttggatgtatgttgctaagtaaagggtggcagtatgaagatgctttacattatatgactccattcatatgacattctggaaaaagcacaaccaaagacatgatcgtcagatcagtgcctct-ctggggttgggatttgaagtattccgtatggtactccagtagtggatatctgacactatgcatttgataaaacccatagaattttaatgcacaaagaacaaatcacaatctacacaaattaaattatttaggatgtggaagtatctaaggacaaaatacagactgcaaccaagaatctaactgtattaccaatgtatgttgcaagtggtgggccaaaggtgctga----------gctggaaatgcatagaatccatagactaaaaacaaaatgtactatacaca--aacagtggactctattttataaacttatttcccatagagataatagttaattttgaaaccactatatCtgtaa i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 364774 892 - 2125214 atacagatagcaaataatcatacaaaagaatgctcaacatcaagtctcattagaagactgcaaatgaaaataacactgagagatcactgcacacttagtagaactgcaggactctaa-aaaaaagctcaacaataacaattagaggttgaagaacaataggtactgtcattctgtgctggtagaatgcattaat-ggtacagccactttgggagatagtttggcagtttttcccaaagataaacaagtcttatc-tactatccaacaaatgcacccctaaattgta-tatgtttagacagctgctttgaaaaattattttcaaacaaaaacta------------------------------------------------------------------------------gcataatcaacttgaagaacaaccaagcaatggaata-ccattcagcaacagaaaggaatgaactttcaacccatgaaaataaatgaatgaatct----tgtacattgctaagtgaaggctggcagtatgaagacactgtatattatatgactccattcatatgacattctggaaaaggcacaactacagagatgataatcagatgagtgactgtcccagggtggggatttgaagtattctctatggtactttagtggtagatacctgacactatgcatttgataaaacccatagaattttaaagcac-aaaaagaaatcacaatctacac-----aaattatttaggttgtggaagtatctaaggatgaaatatagggtgcaacaaagaatctaactgtattaccaatgtatgttgcaagtggtgggccaaaagtgctgacctaagtcattctggaaattagtcgaatctatagactaaaagcaaaatgtagtgtacaca--aaaagcggactctattttataaagttatttctcatagggttaatagttaattttgaaaccactatatctgtaA i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018487315v1 5683849 897 - 15679484 atagagataacaaataatcacacaaaaggatattcaacatcatgtctcattaggagattgcaaattaaaataatgctgagatatcactgcacacctaataaaactgcaggactct-t-aaaagagctcaacaatgacaattggaggtt---gaacaacaggtactatcattcattactggtagaatgcattaat-ggtacagccactttgggagacagtttggcagtttttcccaaagataaacaagtcttacc-tacaatccaacaaatgtacccctaaattgtattatgattagagagctgctttgaaaaatgattttcaaacaaaaacta------------------------------------------------------------------------------gcataatcaacttgaagtacaaccaagcaatggaatatccattcagcaacagaaaggaatgaactttcaacccatgaaaataaatgaatgaatcttgcatgtatgttgctatgtgaagggtggaagtataaaaatactatacattatatgactccattcatatgacattccagaaaaggcacaactacagagatgataatcaggtaagtgactat-ctggggtggggatttgcagtattctgtatgatactttagtggtgaatacctgacactatgcatttgataaaacccatagaattttaaagcacgaggaacaaattacaatctacaaaaatgaaattatttaggttgtggaagtatctaaggacaaaatacacagtgcaaccaagaatctaattgtattaccaatgtatgttacaaatggtgggccaaaggtactgacataagtcattttgaaaataagtagaatctacagactaaaagcaaaatgtactattcaaa--aacagtaga--ctattttgtaaagttatttcccataggggtaatagttaattttgaaaccactatatctgtaa i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378119 26262317 1323 + 36383700 I e calJac3.chr8 91746763 1327 - 128169293 I a score=3172146.000000 s hg38.chr7_KI270899v1_alt 15590 1561 + 190869 aaagaa-aaataaccatgattttcctctatactatcaaca-ctccacttttaacagcaaattgtggggggtgggggg---tgtttcccataccaaccaatattccaactctctggaaaacaattgggtatcctgtaattcaactgtgacactgattacctggagttagtatacaccctacaggttaagggcttagtaacaccagactgtccacaacctcagatgccaatcacaagttgtgaatccccagtttacccaaacttctatatgacttggctagaaactaggcattcctacaccccctcttcaggtttgacaatttgctatgatggcttatggaact--aggaaatacttacttatgtttactagttattatggtctcaatgtgtgtac----a-cccccaccccaaattcctattttgaaatgtaatccccaaagggatggtattcagaggtaaccgagaggtgatcggatcatgagagtgctgtcctcatgaatgaaaccagtgcccttataaaagcatctaggagcccgtttccccattctgccatgtcacgacat-gctagaaggcactatctatgatagatgagccctcactagacatcaaatctgtcagccttgatctggaactttccaaattccatattttaggaatttttatggaagcttcatcatgtagacatgacggattattaactcaatttccagtcccttcacaccctcaaaggattgcatgttaagctaaaagttacaaccttcttatcatggcttggtctttctggtgaccatcccc-atcctgaaaccatccaggaacccacagagtgtccttattagaacagaagccattcctattatccaggagattccaagagatttaggaactctgcgtcaggaaccagggccaaagaccaaatattagaacacaagatgctcctagcacccctactgttcaggaaa-ttataatagttttagaagctctgtaccaggaactgcagacacagaccaaacatatatttcttattaagtcccaaCCTGGAATCTTGATCAAGAATGAATTCCTTGTTCCCAATGGTACAAGGGATGaaataaatggc----agatagtaggagccaggttcctcattattacagtgagaagttacagataaaaaat-agggaagcctagaatgatctctgtcataatgagtcaga--atgtatatataca---------acgtaagtataaactcacatttagcttaacatatacatagatggttccacatagaaacctttataattaagtgggtacatataagttagaagacacacata--tatttctttgcactgtcagctgtaagtgtcatgatgcaatgaccacatttagtggccagatgtaag-tttttcataccattctctaacaaaagaaatcagggctattag----aagaaatagctgaaactaggactgggacagaa-aatatatgagccagggtacttttgaagtaacagaaataaattat-------------aaaaaaaa--catgaaattatgta-aaaggagccagtg------gaaagagctaccaatggccacagg-tatgaacaaagagcaacaaaatactg s panTro5.chr17 14728 1565 + 83181570 aaagaa-aaataaccatgattttcctctatactatcaaca-ctccacttttaacagcaaattgtggggggtggtggg---tgtttcccacaccaaccaatattccaactctctggaaaacaattgggtatcctgtaattcaactgtgacactgattacctggagttagtatacaccctacaggttaagggcttagtaacaccagactgtccacaacctcagatgccaatcacaagtagtgaatccccagtttacccaaacttctatatgacttggttagaaactaggcattcctacactccctcttcaggtttgacaatttgctatgatggcttatggaact--aggaaatacttacttatgtttactagttattatggtctcaatgtgtgtac----a-cccccaccccaaattcctattttgaaatgtaatccccaaagggatggtattcagaggtaaccgagaggtgatcagatcatgagagtgctgtcctcatgaatgaaaccagtgcccttataaaagcgtctaggagcccgtttccccattctgccatgtcacgacat-gctagaaggcactatctatgatagatgagccctcactagacatcaaatctgtcagccttgatctggaactttccaaattccatattttaggaatttttatggaagcttcatcatgtagacatgacggattattaactcaatttccagtcccttcacaccctcaaaggattgcatgttaagctaaaagttacaaccttcttatcatggcttggtcttcctggtgaccatcccc-atcctgaaaccatccaggaacccacagagtgtccttattagaacagaagccattcctattatccaggagattccaagagatttaggaactctgcgtcaggaaccagggccaaagaccaaatattagaacacaagatgctcctagcacccctgctgttcaggaaa-ttataatagttttagaagctctgtaccaggaactgcagacacagaccaaacatatatttcttattaagtcccaaCCTGGAATCTTGATCAAGAATGAATTCCTTGTTCCCAATGGTACAAGGGatgaaataaatggcagatagatagtaggagccaggttcctcactattacagtgagaagttacagataaaaaat-agggaagcctagaatgatctctgtcataatgagtcaga--atatatatataca---------acataagtataaactcacatttagcttaacatatacacagatggttccacatagaaacctttataattaagt-ggtacatataagttagaagacacacata--tatttctttgcactgtcagctctaagtgtcatgatgcaatgaccacatttagtggccagatgtaag-tttttcataccattttctaacaaaagaaatcagggctattag----aagaaatagctgaaactaggactgggacagaa-aatatatgagccagggtacttttgaagtaacagaaataaattat------------aaaaaaaaa--catgaaattatgta-aaaggagccagtg------gaaagagctaccaatggccacagg-tatgaacaaagagcaacaaaatactg i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 3254 1561 - 30167 aaagaa-aaataaccatgattttcctctatactatcaaca-ctccacttttaacagcaaattgtggggggtgggggg---tgtttcccataccaaccaatattccaactctctggaaaacaattgggtatcctgtaattcaactgtgacactgattacctggagttagtatacaccctaca-gttaagggcttagtaacaccagactgtccacaacctcagatgccaatcacaagtagtgaatccccagtttacccaaacttctatatgacttggccagaaactaggcattcctacaccccctcttcaggtttgacaatttgctatgatggcttatggaact--aggaaatacttacttatgtttactagttattatggtctcaatgtgtgtac----a-cccccaccccaaattcctattttgaaatgtaatccccaaagggatggtattcagaggtaaccgagaggtgatcggatcatgagagtgctgtcctcatgaatgaaaccagtgcccttataaaagcatctaggagcccgtttccccattctgccatgtcacgacat-gctagaaggcactatctatgatagatgagccctcactagacatcaaatctgtcagccttgatctggaactttccaaattccaTATTTTAGgaatttttatggaagcttcatcatgtagacatgacggattattaactccatttccagtcccttcacaccctcaaaggattgcatgttaagctaaaagttacaaccttcttatcatggcttggtctttctggtgaccatcccc-atcctgaaaccatccaggaacccacagagtgtccttattagaacagaagccattcctattatccaggagattccaagagatttaggaactctgcgtcaggaaccagggccaaagaccaaatattagaacacaagatgctcctagcacccctactgttcaggaaa-ttataatagttttagaagctctgtaccaggaactgcagacacagaccaaacatatatttcttattaagtcccaaCCTGGAATCTTGATCAAGAATGAATTCCTTGTTCCCAATGGTACAAGGGATGaaataaatggc----agatagtaggagccaggttcctcactattacagtgagaagttacagataaaaaat-agggaagcctagaatgatctctgtcataatgagtcaga--atatatatataca---------acataagtataaactcacatttagcttaacatatacatagatggttccacatagaaacctttataattaagtgggtacatataagttagaagacacacata--tatttctttgcactgtcagctgtaagtgtcatgatgcaatgaccacatttagtggccagatgtaag--ttttcataccattctctaacaaaagaaatcagggctattag----aagaaatagctgaaactaggactgggacagaa-aatatatgagccagggtacttttgaagtaacagaaataaattat------------aaaaaaaaac-catgaaattatgta-aaaggagccagtg------gaaagagctaccaatggccacagg-tatgaacaaagagcaacaaaatactg i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 33982 1574 + 85365473 aaataa-aaataaccatgattttcctctatactatcaaca-cttcacctttaacagcaaattgtggggggtgggggg---tgtttcccacaccaaccaattttccaaccctctggaaaacaattgggtgtcctataattcaactatgacactgattacctggagttagtatagaccctacaggttaagggcttagtaacaccagactgtccccaacctcagatgccaatgacaagtagtgaatccccagtttacccaaacttctatatgacttggctagaaactaggcattccgacaccccctcttcaggtttgataatttgctatgatggcttatggaact--aggaaatacttacttatgtttactagttattatggtctcaatgtgtatac----accccccaccccaaattcctattttgaaatgtaatccccaaagcgatggtattcagaggtaattgagaggtgatcagatcatgagggtgctgtcctcatgaatgaaaccagtgcccttataaaagcgtctaggggcccgtttccccattctgccatgtcaggacat-gctagaaggcactatctatgatagatgagccctcactagacatcaaatctgtcagccttgatctggaactttccggattccaTATTTTAGgaattcttatggaaacttcatcatgtagacatgatggattattaactcaatctccagtcccttcacaccctcaaaggactgcatgttaagttaaaagttacaagcttcgtatcatggcttggtctttctggggaccatgccc-atcctgaaaccatccaggaacccacagagtgtccttattagaacggaagccattcctattatccaggagattccaagggatttacgaactctgtgtcaggaaccagggccaaagaccaaatattagaacacaagatgctcctagcaccccttttgttcaggaaa-ttataatagttttaggagctctgtaccaggaactgcagacagagaccaaacatatatttcttattaAGTCCCTACCTGGAATCTTGATCAAGAACGAATTCCTTGTTCCCaatggaacaagggatgaaataaatggc----agatagtaggggccaggttcctcactcttagagtgagaagttacagataagaaat-ggggaagcctagaatgatctctgtgacaatgagtcact--atatatatacatatatatatatatatatgtataaactcacatttagcttaatatatacacagatggtcccacatagaaacctttataattaagtgggtacatataagttagaagacgcacata--tatttctttgcactgtcagctgtgagggtcatgatgcaatgagcacatttagtggccagatgtaag-tttttcataccattctctaacaaaggaaatcaggggtctttg----aagaaatggctgaaactaggactgggacagaa-aatatacgagccagggtacttttgaagtaacagaaggaaactat------------aaaaaaaaatacatgaaattatgtc-aaaggagccagtg------gaaagaactcccaatggccacagg-tataaacagacagcaacaaaacactg i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91748090 1547 - 128169293 aaagaacaaataaccctgattttcctctatactttcaacacttccacttctgacagcaattt----tgagtggggggagatgtttccc---acaaccaattttccaatgctctggacaataattgggtgtcctataatttcattatgacattaattagctggagttcatacagaccctacaggttaagggtttaggaatatcacactgtccccgacctcaggtgccaatcaaaagtagtgaatccccagtttatgcaaacttctgtatgacttggctagaaatgaggcactcctacacccttccctcaggtttgataattttgtatgatggcctatggaactcaggaaaacacttacccatgtttattagttactatggtctcaatgtgtgtat----a-cc----ctccaaattcctatgttaaaatgtaatcctcaaagggatggtattcagaggtaatagagaggtgattggatcatgagggtgctgccctcatcaatgaaaccagcacccttataaaagaatctagaagcttttttccccattctgccatgtcagaatatggctagaaggcactatctatgagggatgagccgtctctagacatcaaatctgtcagacttgatctgggacttttcagattccatattttaggaatttttatggaagcttcatcatatagacatgattgattattaactcaatctcccgtcccttcaaaccctcaaaggattgcatgtaaagctaagagttacaagcttcttattatggcttggtccttctggtggccatcccccatcctgaaaccatccaggaacccacagagggtcctt------acagaagacatttctatcactcaggagattccaa-ggatttaggaactctgcttcaggaaccagggccaaagaccaaatattagaacacgagatgtttctagcacccctattgttcagtaaa-taataaaagttttaggagctctctattaggaactacagacagagaccaaac--atatttctcattaaattgcaaCCTGGAATATAGATCAAAAATGAATTCCTTGTTCCCAATGGACCAAGGCATGaaataaatggc----aaacagtgggagccaggttcctcactgttagagtgagaaattacagataagaaatgggggaagcctagaatgatctctgtgctaatggatccga--atatatc------------------taagtataaactcacatttcggttaatatatacacagatggttccacgtagaaaattttaaaattaagtgggtacatataagttagaatacacacata--tatttctttgcactgtcagctgtgagggacatgatgcaataaccacatttagtggccagatgtaag-tttttaataccattctctaacaaaggaaatcagggctctttg----aaaaaatggctgaaactaggactaggacagaacaatacatgagccaggatacttttgaaataac--aaagaaattgt--------atataaataaata--aatgaaattacgtc-aaaggagccagtg------gaaagagctcccaatggccacagggtatgaacaaagagcaacaaaatactg i calJac3.chr8 I 1327 C 0 s saiBol1.JH378119 26263640 1543 + 36383700 aaagaacaaataaccctgattttccactatactctcaaca-tttcacttctgacagcaattt----tgagtggagcg---tgtttcccacaacaaccaattttccaactctctggacaataattgggtgttctacaatttcattatgacattaattacctggagttcatacagaccctataggttaaggtcttagtaataccagactgtccccaacctcaggtgccaatcaaaagtagtgaatccccagtttacccaaatttctatatgacttggctagaaactaggcactcctacaccctttcctcaggtttgataattcgctataatggcttatggaactcaggagaacacttacttatgtttactagttactatggtctcaatgtgggttt----a-cc----ctccaaattcctatttt-aaacataatccccaaagggatggtattcagaggtaattgagaggtcactggattatgagggtgctgccctcatcaatgaaaccagtgcccttataaaagaatctaggagc--ctttccccattctgccatgttagaacatggctagaaggtactacctatgagggatgagccctcaccaggcatcaaatctgtcagacttgatctgggacttttcagattccatatattaggaattcttatggaagcttcatcatgtagacatgattgattattaattcaatttccattcccttcgcatcctcaaaggattgcatgtaaagctaaaagttacaagcttcttatcatggcttggtctttctggtgaccatcccccatcctgaaaccatcgaggaacccacagagggtcctt------acagaagacatttctatcactcaggagattccaagggatttaggaactctgcatcaggagccagggccaaagaccaaatattagaacacaagatgttcctagcacccctattattcaggaaatttataaaagttttagaagctctgcaccaggaactgcagacagagaccaaat--gtatttctcattaaatcccaaCCTGGAATATAGATCAAAAATGAATTCCTTCTTCCCAATGTAACAAGGCATTTaataaatggc----aaacagtgggagccaagttcctcactgttagagtgagaagttacagatgagaaatgggggaagcctagaataatctttgtgctaatggatccaa--atatata------------------taaatataaactcacatttagcttaatatatacacagatggttccacgtagaaacctttagaattaagtgggtaattataagttagaatacacacata--tatttctttgcactgtcagctgtgagggacatgatgcaataaccacatttagtggccagatgtaag-tttttaataccattctctaacaaaggaaatcagggctctttg----aaaaaatggctgaaactaggactgggacagaacaatatatga--caggatacttttgaagtaac--aaagaaattat--------aaataaataaata--aatgaaattatgtc-aaaggagccagtg------taaagagctcccaatggccacagggtatgaacaaagagcaacaaaattctg i saiBol1.JH378119 I 1323 C 0 s cebCap1.NW_016107703v1 365666 1546 - 2125214 Aaagaa-aaacaaccctgattttcctctatattctcaaca-ttccacttctgacagcaaatt----aggatgggggg-gatgtttcccacaccaacaaatttgccaactctttggacaacaattgggtgtcctataattcaattatgacattaattacctggagttcttacagactctacaggttaagggcttagtaacaccagactgtccccagcctcagatgccaatcaaaagtattggatccccagtttgcccaaacatctatatgacttggctagaaactaggcactcctacatcccctcctcaggtttgataatttgctataatggtttatgaaactcgggaaa-----cacttatgtttgctagttaccatggtctcaatgtttgtataccga-cc----ccccaaattcctatgttgaaacataaaccccaaaggaatggtattcagagataatttagaggtgattggatcatgcaggtgctgccctcattaatgaaaccagtgcccttttaaataaatctaggagcctttttccccattctgccatgtcagggcatggctagaaggcactatctacgaggtaggagccctcattagacatcgaatctgtcaggcttgatctggaactttgcagattccatattttaggaatttttatggaagcttcaacatgtagatgtgattgattattaactcaatctccagtcccttcacaccctcaaaggattacatgtgaagctaaaagttacatgcttcttatcatggcttggtctttctggtgaccatcccctatcctgaaaccatccaggaacccatagagggtcctt------acagaagacattcctatca-tcaggagattccaagggatttaggaactctgtgtcaggaaccaggaccaaagaccaaatataagaacacaagatgttcctagcacccctattgttcaggaaa-ttataaaagttttaaaagtgctttatcaggaactggagacagagaccaagc--atatttctcattaaatcccaaCCTGGAATCT-------GAATGAATTATTTGCTCCCAATGGGACAAGGGATAaaataaatggc----agatagtgggaaccaggttccagactgttagagtgagaagttccagataagaaatgggggaagcctggaatgatctctgtgataatgggtcagaatatatata------------------tatgtataaactcatatttagcttaatatatacacagatggttccacatggaaacctttataattaagtgggtacatataagttagaatacacacacatctatttctttgcactgtcagctgtgagggtcatgatgcaatgagcacatttggtggccagatgtaag-tttttaataccattctctaacaaatgaaatcagggctctttg----aaaaaatgtataaaactaggactgggacagaa-aatatatgaaccaggatacttttgaagtaat----agaaactgtta--aaaaaaaaaaaaaaaaa--catgaaattatgtc-aaaggagccagtg------gaaaaagctcccaatagccacaggttatgaataaagagcaacaaactaCTG i cebCap1.NW_016107703v1 C 0 I 1935 s aotNan1.NW_018487315v1 5684746 1534 - 15679484 aaaaaa-aattaaccctgattttcctctatactctagaca-cttcacttctgacagcaaatt----ggggtggtggg---tatttcccacacgaaccaattttccaactctttggacaacaattggg------------------tgacattaattacctggagttcatacagaccctacaggttaagggcttagtaacaccagactatccccaacctcagatgccaatcaaaagtagtgaatccccagtttatccaaacttc--tatgacatggctagaaagtaggcactccaacacccactcctcaggtttgataatttgctataatggcttatggaactcaggaaaaaa---actta-ggttactagttactacagtctcaatgtgtgtat----a-tc----ctccaaattcctatgttgaaatgtaatccccaaagggatggtattcacaggtaattgagaggtgactggatcatgagggtactgccctcatgaatgaaaccagaacccttataaaagaatctagaagctttttttcccattctgccatgtcaggacatagatagaaggcacgatctatgagggatgaggcctcactagacgtcagatctgtcagacttgatctgggactttccagattccatattgatgaagcttttatggaagcttcatcacgtagacatgatcgattattaactaaatctgcagtcccttcacacccccaaaggattgcagatgaagctaacagttacaagcttcttaccatggcttggtctttctggtgaccatcccccatcctgaaaccatccaggaacccacagagggccctt------acagaagacattcctacccctcgggagataccaaggaatttaggaactctacatcaggaaccagggccaaagaccaaatattagaacatgggatgttgctagtacccctattgttcaagaaa-ttataaaagttttaggagccctgtacccggaactggagacagagaccaaac--acatttctcactaaatcccaaCCTGGAATCTAGATCAAAAATGAATTCTTTGTTCCCaatggaacaagggatgaaataaagtgc----agatagtgggagccagtttcctcaatgttatagtgagaagctatagataagaaatgggggaagcctagaatgagc--tgtgataatggatcaga--atatatata-------------atgtaagtataaactcacatttagcttaatatatacacagatggttccacatagaaacctttataattaagtgggtacatataagttagaatacacacata--gatttctttgcactgtcagctgtgagggtcatgatgcaatgaccacatttagtggccagatgtaagttttttaataccattctctaa----------cagggctctttgaaaaaaaaaatggctgaaactaggacagggacagaa-aatacatgagccaggatacttcagaagtaac--aaatatattgtaaataaataaataaataaata--catgaaattatgtcaaaaggagccagtgcaaagaaaaagagctcccaatggccacagagtatgaacagagagcaagaaaatactg i aotNan1.NW_018487315v1 C 0 C 0 a score=42347.000000 s hg38.chr7_KI270899v1_alt 17151 38 + 190869 tacaattagataacaaccaaaagattaaagtaactatc s panTro5.chr17 16293 35 + 83181570 tacaattagat---aaccaaaagattaaagtaactatc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 4815 37 - 30167 tacaattagataa-caccaaaagattaaagtaactatc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35556 38 + 85365473 tagaattagataacaaccaaaacattaaagtgactatc i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91749637 34 - 128169293 tagaattcaatcacaatcgaaaggttaaagtaa----c i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26265183 38 + 36383700 tagaactggataacaaccaaaagattaaagtaattatc i saiBol1.JH378119 C 0 C 0 s aotNan1.NW_018487315v1 5686280 34 - 15679484 tagaattggataata----aaagattaaagtaactatc i aotNan1.NW_018487315v1 C 0 I 19 e cebCap1.NW_016107703v1 367212 1935 - 2125214 I a score=11581.000000 s hg38.chr7_KI270899v1_alt 17189 13 + 190869 tgtggacccatac s panTro5.chr17 16328 13 + 83181570 tgtggacccatac i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01004482v1 4852 13 - 30167 tgtggacccatac i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35594 13 + 85365473 tgagtatccatac i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91749671 13 - 128169293 tgagtgtccatat i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26265221 13 + 36383700 tgagtgtccatat i saiBol1.JH378119 C 0 C 0 e aotNan1.NW_018487315v1 5686314 19 - 15679484 I e cebCap1.NW_016107703v1 367212 1935 - 2125214 I a score=383508.000000 s hg38.chr7_KI270899v1_alt 17202 279 + 190869 tggtataaataaatgattaaacagatatgcaaatgggctgaatagaaatctcttatacagaagaattccaaatacctgatacaga----cagccatcaaggaggtggggctaactccccactcctttaagtatgagctctgcatgatgacttcctccaaaagcatacatacaatatagacatgggaaaaaagtaactttacagtgaaa----------------------------------------------------aacctgaaaa--------------------------cactgcctca------------accaagtga-----------------taaaagttaacattaatggtgataacacatcttgagagcatgAAGT s panTro5.chr17 16341 282 + 83181570 tggtataaataaatgattaaacagatatgcaaatgggctgaatagaaatctcttatacagaagaattccaaatacctgatatagacactcagccatcaaggaggtggggctaactccccactcc-ttaagtatgagctctgcatgatgacttcctccaaaagcatacatacaatatagacatgggaaaaaagtaacttcacagtgaaa----------------------------------------------------aacctgaaaa--------------------------cactgcctca------------agcaagtga-----------------taaaagttaacattaatggtgataacacatcttgagagcatgAAGT i panTro5.chr17 C 0 N 0 s gorGor5.CYUI01004482v1 4865 279 - 30167 tggtataaataaatgattaaacagatatgcaaatgggctgaatagaaatctcttatacagaagaattccaaatacctgatataga----cagccatcaaggaggtggggctaactccccactcctttaagtatgagctctgcatgatgacttcctccaaaagcatacatacaatatagacatgggaaaaaagtaacttcacagtgaaa----------------------------------------------------aacctgaaaa--------------------------cactgcctca------------accaagtga-----------------taaaagttaacattaatggtgataacacatcttgagagcatgAAGT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35607 280 + 85365473 tgctataaataaatgattaaatagatatgcaaatgggctgaatagaaatctcttatacagaagaattccaaatacctgatagaca--ctcagccatcaaggaggtggggctaacttcccactcc-ttaagtatgggctctgcatgatgacttcctccaaaagcgtacatacaatatagacatgggaaaaaaggaacttcacagtgaaa----------------------------------------------------aacctgagaa--------------------------cactgcctca------------gccaggtga-----------------taaaagttaacattaatggtgataacacatcctgagagcatgaagt i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91749684 366 - 128169293 tggtataaacaaatgattaaatagat-----------ttgaatagaaattttttatacagaagaattttaaataactgatacagatattcagctatcaaggacatgtggctaactccccactcc-ttaggtgtgggctctgtgtggtgacttcctcca-----atatagaca-------tggggaaaaaaagtaactacacagcaagaaacctgaaaacattatctcagccaggtgatcaaagctaacatTaattgcttgaacctgggaggcaaaggttgcagtgagccgaaatctcgccattgcactccagcctggcaccaggcgacagggcaagcctctgtctcaaaaaaaaaaaaaaTGGTGATAACACATCTTGAGAGCATGAATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26265234 280 + 36383700 tggtataaacaaacgattaaatagatacacttatggactgaatagaaattttttacacagaataattttaaataactgatacagacattcagctaccaaggacatgcggctaactccccactcc-ttaagtgtgggctctgcatggtgacttcttccaaaaggatacataca--acttcatgggaaaaaaagtaacttcacagcaaga----------------------------------------------------aacctgaaaa--------------------------catcatctca------------gccaggtga-----------------tcaaagttaacattaatggtgataaaacatcttgagagcatgaagt i saiBol1.JH378119 C 0 C 0 s aotNan1.NW_018487315v1 5686333 282 - 15679484 tggtataaattaatggttaaacagatacacaaatgaactgaatagaaatctcttatacagaagaattccaaatacctgatatagacagtcagccatcaaggaggaggggctaactccccactcc-ttaattgtgggctctgcacggtgacttcctccaaaagcatacatataatacagacatgggaaaaaagtaacctcacagtgaga----------------------------------------------------aaccggaaac--------------------------caccacctca------------gccaggtga-----------------tcaaagttaacattaatggtgataacacatcttgagagcatgaagt i aotNan1.NW_018487315v1 I 19 C 0 e cebCap1.NW_016107703v1 367212 1935 - 2125214 I a score=631441.000000 s hg38.chr7_KI270899v1_alt 17481 390 + 190869 GACTAGACTAGCACTtgcaaaccaaaaataaaattcaaagatctttcccccaacca----------------cctctccaccaggggacaccaaagttaacctggaagactggttcaggctatgatgggaaagaggtggtcagacatgcctcattatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacac-aaccttaaatctgataagaaacatttacaatctattctctctgaagcctgctacctggaagcttcatttccatgataaaaccttggtctccataaccccttatcataacccagacactcctttctattgatagtaagtctttcaacaaactgccaatcagaaaaattttaaatgtacctataacctggaagccc-c s panTro5.chrUn_NW_015975002v1 116 390 + 14113 GACTAGACTAGCACTtgcaaaccaaaaataaaattcaaagatctttcccacaacca----------------cctctccaccaggggacaccaaagttaacctggaagactggttcaggctatgatgggaaagaggtggtcagacatgcctcagtatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacac-gaccttaaatctgataagaaacatttacaatctattctctctgaagcctgctacctggaagcttcatctccatgataaaaccttggtctccataaccccttatcataacccagacactcctttctattgatagtaagtctttcaacaaactgccaatcagaaaaattttaaatgtacctataacctggaagccc-c i panTro5.chrUn_NW_015975002v1 N 0 C 0 s gorGor5.CYUI01004482v1 5144 390 - 30167 GACTAGACTAGCACTtgcaaaccaaaaataaaattcaaagatctttcccacaacca----------------cctctccaccaggggacaccaaagttaacctggaagactggttcaggctatgatgggaaagaggtggtcagacatgcctcatgatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacac-aacctaaaatctgataagaaacatttacaatctattctctctgaagcctgctacctggaagcttcatctccatgacaaaaccttggtctccataaccccttatcatagcccagacactcctttctattgatagtaagtctttcaacaaactgccaatcagaaaaattttaaatgtacctataacctggaagccc-c i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 35887 389 + 85365473 gactagaatagcacttgcaaaccaaaaatacaattcaaaggtccttcccacaacca----------------tctctccaccaggggacaccaacgttaacctggaagactggttcaggctatgaagggaaagaggtggtcagagatgcctcattatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacag-gaccttaaatctgataagaaacatttacaatctattctctctaaagcctgctacctggaagcttcatctccacgataaaaccttggtctccat-accccttatcataacccagacacacctttctattgataataactctttcaacaaactgccaatcagaagaattttaaatgtacctataacctggaagccc-t i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91750050 406 - 128169293 AACTAGAATAGCACTtgaaaatcaaaaataaaattcaaaggcccttcccccaaccatctgtataaactccctcctcttcaccagaggacaccaaagttaacctggaagtctggtttaggccatgacgggaaagaggtggtcagacctgcctcattatgccctcctcccttttggaattcaggaaaagatgattagcatttaacatcaacacagaccttaaatctggtaagtaatatttataatctattctctctgaagcctgctaccttgaggcttcatctgcctgataaaattttggtctccataaccccttatcataacccagacactcctttccattgataataattctttcaattaatttccaatcagaaaatgtttcaaattacctataacctaaaagttc-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26265514 406 + 36383700 gactagaatagcacttgcaaaccaaaaataaaattcaaaggtccttcccccaaccatctgtatagattccctcctcttcacgagaggacaccaaagttaacctggaagactggtttaggccatgatgggaaagaggtggtcacacatgcctcattatgccctcctcccttttggaattcaggaaaagccaatcagcacttaacatcaatgcagaccttaaatctggtaagaaacatttacaatctattctctctgaagcctgctaccttgaggcttcatctgcatgataaaattttggtctccataaccccttatcataacccatatattcctttccattgataataattctttcaattaattgccaatcagaaaatgtttcaatctacctataacctgaaagccc-- i saiBol1.JH378119 C 0 C 0 s aotNan1.NW_018487315v1 5686615 403 - 15679484 gactagaatagcacttgcaaaccaaaaataaaattcaaaggcccttcccccaaccatctgtacagactccctcctctccatcaggggacacccaagttaacctggaaggctggttcaggccatgatggg-aagaggtggtcagacttgcctcattatgccctcctaccttttggaattcaggaaaagccaatcagcatttagtttcttaacagaccttaaatctgattagaaacatttacaatctat--tctctgaagcctgctacttggaagcttcatctgcatgataaaactttggtctccataatccc-tatcataacccagacattactttctattgataataactctttcaaccaactgccaataagaaaatgtttaaatctacctataacctggaagtccc- i aotNan1.NW_018487315v1 C 0 I 21 e cebCap1.NW_016107703v1 367212 1935 - 2125214 I a score=203609.000000 s hg38.chr7_KI270899v1_alt 17871 184 + 190869 -ccccccaccctaatccattgggttgtcccaccttcctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctatctccctaaaatgtatagaaccaacctgcaccccaacgaccttgggcacatgttctcagggtctcctgagggctgtgtcaagggccatggtcactcatat s panTro5.chrUn_NW_015975002v1 506 183 + 14113 -acccc-accctaatcctttgggttgtcccacctttctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctatctccctaaaatgtatagaaccaacctgcaccccaacgaccttgggcacatgttctcagggtctcctgagggctgtgtcatgggccatggtcactcatat i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 5534 183 - 30167 -acccc-accctaatccattgggttgtcccacctttctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctatctccctaaaatgtatagaaccaacctgcaccccaacgaccttgagcacatgttctcagggtctcctgagggctgtgtcaagggccatggtcactcatat i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 36276 183 + 85365473 -acccc-accctaatccattgggttgtcccacctttctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctgtctccctaaaatgtatagaaccaacctgcaccccaaacaccttggacacatgttctcagggtctcctgagggctgtgtcatgggccatggtcactcatat i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91750456 161 - 128169293 cacttc-accctaacccactgggttgtcccacctttctggaccaaaccaatatatagcttaaatacatttgattgatgtcttctatctccctaatatgtatagaaccaagttgtatcc-----------------------cagggtctcctgagggctgtgtcataggacatggtcactcatat i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26265920 161 + 36383700 cacttc-acactaacccactgggttgtcccacctttctggaccaaaccaatatatagcttaaatacatttgattgatgttttctatctccctaatatgtatagaaccaagttgcatcc-----------------------cagggtctcctgagggctgtgtcacaggacatggtcactcatat i saiBol1.JH378119 C 0 C 0 e aotNan1.NW_018487315v1 5687018 21 - 15679484 I e cebCap1.NW_016107703v1 367212 1935 - 2125214 I a score=767835.000000 s hg38.chr7_KI270899v1_alt 18055 491 + 190869 ttggctcagaatacatctcttaaaatattttacagtc-tttgactctttttgtggacacactacacatctgctctgcttcccccaaacccctaaacccaggctgattatgagaaaaaccccaagtaaaccacaatggaggacattctacacaatacctgaccaatcctcctaacactgttccaggtcctcagaagtaaagtctgagagattgtcacagccaagaagagcctgacatgatgactaaatgtcctatgggatcctagataggatcctgggagagaaaaaggcagaactaagggaaaccaaataagatgtgagcttatttaataatatagtaatatccagtcattaagtatgacaagaaatgatgtaagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcggatcacctgagatcaggagttcaagaccagcctggccaacgcggtgaaacctca s panTro5.chrUn_NW_015975002v1 689 491 + 14113 ttggctcagaatacatctcttcaaatattttacagtc-tttgactctttttgCGGACAcactacacatctgctctgcttcccccaaacccctaaacccaggctgattatgagaaaaaccccaagtaaaccacaatggaggacattctacacaatacctgaccaatcctcctaacactgttccaggtcctcagaagtaaagtctgagagactgccacagccaagaagagcctgacatgatgactaaatgtcctatgggatcctagataggatcctgggagagaaaaaggcagaactaagggaaaccaaataagatgtgagcttatttaataatatagtaatatccagtcattaactatgacaagaaatgatataagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctaagatcaggagttcaagaccagcctggccaacgtggtgaaacctca i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 5717 491 - 30167 ttggctcagaatacatctcttcaaatattttacagtc-tttgactctttttgtggacacactacacatctgctctgcttcccgcaaacccctaaacccaggctgattatgagaaaaaccccaagtaaaccacaatggaggacattctacacaatacctgaccaatcctcctaacactgttccaggtcctcagaagtaaagtctgagagactgtcacagccaagaagagcctgacatgatgactaaatgtcctatgggatcctagataggatcctgggagagaaaaaggcagaactaagggaaaccaaataagatgtgagcttatttaataatatagtaatacccagtcattaagtatgacaagaaatgatgtaagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgagatcaggagttcaagaccagcctggccaacgtggtgaaacctca i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 36459 491 + 85365473 ttggctcagaatacatctcttcaaatattttacagac-tttgactctttttgCGGACAcactacacatctgatctgcttcccccaaaccactaaacccagtctgattatgagaaaaaccccaagtaaaccacaatggagaacattctacacaatacctgaccaatcctcctaacactgctccacatcctcagaagtaaagtctgagagactgtcacagccaagaagagcctcaaatgatgactaaatgtcgtatgggatcctagataggatcctgggagagaaaaaggaagaactaagggaaaccaagtaagatgtgagcttatttaataatatagtaacatccagtcattaactatgacaacaaatgatataagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctaaggcgggcagatcacctgagatcaggagttcaagaccagcctggccaacatggtgaaacctca i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91750617 475 - 128169293 ttggctcagattacatctcttcaaatgttttacagacttttaactctttttgtggacacactacacatctgatctacttccccaaaacccataaccccagtctaactatgagaaaaacatcaagtaaaccaaaatggaggac-------acaatacctaaccaatcctcctaacactgtttcagggcctcagaagaaaagtctgagagactctcacagcaaggaatagccagacatgacaact-aatgttctcttggatcccagctagaatcctgggacaaaaaaaggcagaactaagagaaaccaaataaaatgtgagcttatttaataatatgttaatatccagtcattaactgtgaa---aaactatgtaagatgttggccagtt------gctcatgcctgcaatcccagcactttgggaggccgaggcaggcaaattacctgaggtcaggagttggagaccaacctgcccaacatgatgaaacctca i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26266081 481 + 36383700 ttggctcaga----atctcttcaaatattttacagac-tttaactctttttgtggacacactacacatctgatttacttcccccaaacccataatcccagtctaactatgagaaaaacatcaagtaaaccacaatggaggaccttctatacaatacctaaccaatcctcctaacactgtttcagggcctcagaagaaaagtcggagagactctcacatcaaag---agactgacatggtaactaaatgtcctctgggatcctagctagaatcctgggacagaaaaaggcagaactaagagaaaccaaataaaatgtgagcttatttaataatatattaatatccagttattaactaagaa---aaatgatgtaagatgttggcccggtgcggcagctcacacctgtaatcccagcactttgggaggctgaggcaggcaaatcacctgaggtcaggagtaagcgaccaacctggccaacatgatgaaacctca i saiBol1.JH378119 C 0 C 0 s aotNan1.NW_018487315v1 5687039 475 - 15679484 ttggatcagaatacatctctttaaatattttatagac-tttgactcttttagtgaacaCACtacgtatctgatctgcttcccccaaacccataaccccagtctaattatgagaaaaacagcaagtaaaccacaatgaaggacattctacacaatacctggccaatcctcctaacagtgttccaagtcctcagaaggaaagtatgagagactgtgacagccaagaagagcctgacatgatgactaaatgtcctgtgggatacta-------------gacagaaaaaggcagaactaagagaaaccaaataaaatgtgagcttatttaataatatagtaatatccggtcattaactgtgac---aaatgatgtaagatgttggccaggcatggtgggtcctgcctgtaatcccagaattctgggaggcagaggcgggagaatctcctaaggtcaggggttccagaccaacctggccaacatggtgaaacccca i aotNan1.NW_018487315v1 I 21 C 0 e cebCap1.NW_016107703v1 367212 1935 - 2125214 I a score=349373.000000 s hg38.chr7_KI270899v1_alt 18546 174 + 190869 tctctactaaaaatacaaaaattagccgggcatgatggcaggcacctgtaataccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcacgccactgcagtccagcctggtt--------gagactctgtctgaaaaaaaaaaaa s panTro5.chrUn_NW_015975002v1 1180 174 + 14113 tctctactaaaaatacaaaaattagccgggcgtgatggcaggcgcctgtaataccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcatgccactgcactccagcctggtt--------gagactctgtctggaaaaaaaaaaa i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6208 174 - 30167 tctctactaaaaatacaaaaattagccgggcatgatggcaggcgcctgtaataccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcacgccactgcactccagcctggtt--------gagactctgtctggaaaaaaaaaaa i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 36950 174 + 85365473 tctctactaaaaatacaaaaattagacgggcgtgatggcaggcgtctgcaataccagctactcaggaggctgaggcaggagaatcgctggaacctgggaggcggaggttgccgtgagccgagatcgcaccactgcactccagcctgggt--------gagactctgtctgaaaaaaaaaaaa i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91751092 178 - 128169293 tctctactaaaaatacaaaaattagccaggcatgatggcaggtgcctgtaatcctagcctctcaggaggctggggcaggagaatcacttgaacatggaagg-ggaggatgcagtgagctgagatcatgccactgtactacagcctgggtgacagagggagactcagtctcaaaaaaaaa--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26266562 182 + 36383700 tctctactaaaaatacaaaaattagccgggcatgacggcaggtgcctgcaatcctagcctctcaggaggcaggggcaggagaatcacttgaacctggaaggcagaggctgcaataagccgagatcatgccactgcactccagcctcggtgacagagtgagactctgtctcaaaaaaaaaaaa i saiBol1.JH378119 C 0 I 2400 s cebCap1.NW_016107703v1 369147 177 - 2125214 tctctcctaaaaatacaaaaattagctaggcattatggcaggcacctgtaatctcagctacttgggagactgaggcaggagagttgcttgaagctgggaggcagaggctgcagtgagctgagatcacaccaatgcactccagcctgggc----aagcaagactccatctcaaaaaaaaaaa- i cebCap1.NW_016107703v1 I 1935 C 0 s aotNan1.NW_018487315v1 5687514 178 - 15679484 tctctactaaaaatacaaaaattagctgagtgtgatggcaggtgccagtaatctcagctacttgggaggctgaggcaggatagctgcttgaaactgagaggcagaggttgcagtgaactgagatcatatcactgctctccagcctgggt----aagaaagactccatcttaaaaaaaagaaa i aotNan1.NW_018487315v1 C 0 C 0 a score=262252.000000 s hg38.chr7_KI270899v1_alt 18720 204 + 190869 aaaaa-aaaaagatgtta--aacctatctgatacatgttggtatgttaaaaagcggggaaactaggttgcgtctacatgggaaatctgcattttcttcccaatttctgtatgaatctaaaactaatttaaaataaaacctctatttaaaaaTTGTAA-TTTTTTCAGATATCTGCTAAATTATTTGTACTAAAAAT---TAGTAATTGACA s panTro5.chrUn_NW_015975002v1 1354 199 + 14113 aaaaa------gatgtta--aacctatctgatacatgttgatatgttaaaaagaggggaaactaggttgcgtctacatgggaaatctgcattttcttcccaatttctgtatgaatctaaaactaatttaaaataaaacctctatttaaaaaTTGTAA-TTTTTTCAGATATCTGCTAAATTATTTCTACTAAAAAT---TAGTAATTGGCA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6382 205 - 30167 aaaaaaaaaaagatgtta--aacctatctgatacatgttgatatgttaaaaagaggggaaactaggttgcatctacatgggaaatctgcattttcttcccaatttctgtatgaatctaaaactaatttaaaataaaacctctatttaaaaaTTGTAA-TTTTTTCAGATATCTGCTAAATTATTTGTACTAAAAAT---TAGTAATTGACA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37124 196 + 85365473 -----------gatgtta--aacatatctgatacatattgatatgttaaaaagaggggaaactaggttgcgtctacatgggaaatctgcattttcttcccaatttctgtgtgaatctataactaatttaaaataaaacctttatttaaaaaTTGTAA-TTTTTTCAGATTTCTGCT-AATTATTTGTACTAAAAATTAGTAGTAATTGACA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91751270 186 - 128169293 --------------gttaataacataactgatacatgttcatatgttaataagaagggaaacc-ggttggaaatacatgggaaatctgcattatcttcccaattttagtgtgaatccaaaactaacttaaaataaaatctttattaaaaacttgta--ttttttaaaGTATCTGCT----TATTTGTACTATT-AG---TAGAAATTGACA i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 369324 196 - 2125214 -----------GATATTAATAACATATCTGATACATGTTGATatgttaataaaaggggaaactaggttgagtctacacaggaaatctgcattttcttcccaatttctgtgtgaatctaacagtaatttaaaataaaacatttattaaaaaaCTATAATTTTTTTCAAATATTGGCTTAACTATTTGTACTAAT-AG---TAACAATTTACA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018487315v1 5687692 199 - 15679484 ----aaaaaaagatgttaataacatatctaatacatgctgatacgttaataagaggggaaactcagttgggtctacatgggaaatctgcattttcttcccaattgctttgtcaatctaagactaatt-----taaaaCCTTTATTTAAAAATTATAATTTTTTTCACATATCTGCTTAATTCTTTGTACTAATAAG---TAGTAATTGACA i aotNan1.NW_018487315v1 C 0 I 310 e saiBol1.JH378119 26266744 2400 + 36383700 I a score=2205.000000 s hg38.chr7_KI270899v1_alt 18924 3 + 190869 GTA s panTro5.chrUn_NW_015975002v1 1553 3 + 14113 GTA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6587 3 - 30167 GTA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37320 3 + 85365473 CTA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91751456 3 - 128169293 CTA i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 369520 3 - 2125214 CTA i cebCap1.NW_016107703v1 C 0 C 0 e aotNan1.NW_018487315v1 5687891 310 - 15679484 I e saiBol1.JH378119 26266744 2400 + 36383700 I a score=153323.000000 s hg38.chr7_KI270899v1_alt 18927 100 + 190869 ACTACTCCTACTTTTAAAAATAAGAGCATTCATGATACTGCAAAGTAAATTATACAGACTAATATATACTTTCAAAGAAATGCCCCTTTTACATGTTTTA s panTro5.chrUn_NW_015975002v1 1556 100 + 14113 ACTACTCCTACTTTTAAAAATAAGAGCATTCATGATACTGCAAAGTAAATTATACAGACTAATACATACTTTCAAAGAAATGCCCCTTTTACATGTTTTA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6590 100 - 30167 ACTACTCCTACTTTTAAAAATAAGAGCATTCATGATACTGCAAAGTAAATTATACAGACTAATATATACTTTCAAAGAAATGCCCCTTTTACATGTTTTA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37323 100 + 85365473 ACTACTGCTACTTTTAAAAATAAGAGCATTCAAGATACTGCAAAGTAAATTATGCAGACTAATACATAATTTCAAAGAAATGCCCCTTTAACATGTTTTA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91751459 91 - 128169293 ACTACTCCGACTTTTTAAAGTAAGAGCATTCATGCT--------ATAAATTATGCAGACTAATACATAATTTCAAAGAAATGCCTC-TTTACATGCTTTA i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 369523 100 - 2125214 ACTACTCCTACTTTTTAAAATAAGGGCATTCATGATGCTGCAAAGTAAATTATGAAAACTAGTATATAATTTCAAGGAAATGCCTCTTTTACCTGTTTTA i cebCap1.NW_016107703v1 C 0 I 436 s aotNan1.NW_018487315v1 5688201 100 - 15679484 ACTACTGCTACTTTTTAAAATAAGAGCATTCATGACGCTGCAAAATAAATTATGCAAACTAATATATGACTTCAAGGAAATGCTTCTTGTACATGTTTTA i aotNan1.NW_018487315v1 I 310 C 0 e saiBol1.JH378119 26266744 2400 + 36383700 I a score=316765.000000 s hg38.chr7_KI270899v1_alt 19027 299 + 190869 TGTTAAGATAACATATATGTGTAAACATG---GTCATATCAT-TTTCCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGGAAAAAAATTCACATTTTGGAGACTATTTCAATTTACGGCTGGACGTTTTCA-AAGTATGACTTTGCG---AAAAAAAAAAAAGT---TCAAAT-------TGATTCATTGTGACTGGATCACTTATTCTAATGAA-TGCTTGCCTTTATTTTGTTTCCCAGCATTCCTTTCAGCTACGATACAAAAGAAGCAAATATTTGCCACTGG-AAAAAATATTCAAA s panTro5.chrUn_NW_015975002v1 1656 300 + 14113 TGTTAAGATAACATATATGTGTAAACATG---GTCGTATCAT-TTTTCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGGAAAAAAATTCACATTTTGGAGACTATTTCAATTTACGGCTGGATGTTTTCA-AAGTATGACTTTGTG--AAAAAAAAAAAAAGT---TCAAAT-------TGATTCCTTGTGACTGGATCACTTATTCTAATGAA-TGCTTGCCTTTATTTTGTTTCCCAGCATTTCTTTCAGCTACGATACAACAGAAGCAAATATTTGCCACTGG-AAAAAATATTCAAA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6690 300 - 30167 TGTTATGATAACATATATGTGTAAACATG---GTCATATCAT-TTTTCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGGAAAAAAATTCACATTTTGGAGACTATTTCAATTTACGGCTGGACGTTTTCA-AAGTATGACTTTGTG--GAAAAAAAAAAAAGT---TCAAAT-------TGATTCATTGTGACTGGATCACTTATTCTAATGAA-TGCTTGTCTTTATTTTGTTTCCCAGCATTCCTTTCAGCTATGATACAACAGAAGCAAATATTTGCCACTGG-AAAAAATATTCAAA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37423 296 + 85365473 TGTTAAGATAACACATACGTGTAAACATA---TTCATATCAT-TTTTCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGG-AAAAAATTCACATTTTGGAGACTATTTCAATTTACGGCTGGACGTTTTCA-AAGTATGACTTCGTGAAAAAAAAAAAAAAAGT---TCAAAT-------TGATTCATTGTGACTGGATCACTTATTCTAATGAA-TGCTTGTC-----TTTGTTTCCCAGCATTCCTTTCAGCCACGATACAACAGAAGCAAATATTTGCCACTGG-AAAAAATATTCAAA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91751550 308 - 128169293 TGTTAAAATAATACATATGTGTAAACATGTTTATTATATCTT-TTCCTTTGTGGTATGGTTCACTCTCTAAGAAAGCTGGTCACCTTAGAACCAGGG-AAAATATTTACATTTTGGACACTATTTCAATTGATCGGTGAACATTTTCAAAAGGATGACTTTGCA--GAAAAAAAAAAAAACCATTCAAATAGCAAATTGATTAATTGTGACTGGATCACTTATTCTAATGAATTACTTGTC-------TGTTTCTCAGCATTCCTTTTAGCTACAATACAACAGAAGCAAATATTTGCCACTGGAAAAAAATATTCAGA i calJac3.chr8 C 0 C 0 s aotNan1.NW_018487315v1 5688301 293 - 15679484 ----------ACACATACATGTAAACATACTTATCATATCTTCTTTTCTTGTGGTGTGGTTCACTCTCTAGGAAAGCTGTTCACCTTAGAACCAGGA-AAAAAATTCACATTTTGGAGACTATTTCGATTTACTGCTGAATGTTTTCAGAAGTGTGACTTTGTT--AAAAAAAAAAAAAAA---TCATATAGCA--------AATTGTAACTCGATCACTTATTCTAATAAA-TGCTTGTCTTTATTTTGTTTCCCAGCATTCCTTTTAGCTACAATAAAACAAAAGCAAGTATTTGCCACTGG-AAAAAATATTCAAA i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378119 26266744 2400 + 36383700 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=4011.000000 s hg38.chr7_KI270899v1_alt 19326 2 + 190869 ga s panTro5.chrUn_NW_015975002v1 1956 2 + 14113 ga i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6990 2 - 30167 ga i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37719 2 + 85365473 ga i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91751858 2 - 128169293 GA i calJac3.chr8 C 0 I 748 s saiBol1.JH378119 26269144 2 + 36383700 ga i saiBol1.JH378119 I 2400 C 0 s aotNan1.NW_018487315v1 5688594 2 - 15679484 GA i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=2865.000000 s hg38.chr7_KI270899v1_alt 19328 2 + 190869 ca s panTro5.chrUn_NW_015975002v1 1958 2 + 14113 ca i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6992 2 - 30167 ca i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37721 2 + 85365473 ca i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378119 26269146 2 + 36383700 ca i saiBol1.JH378119 C 0 C 0 s aotNan1.NW_018487315v1 5688596 2 - 15679484 CA i aotNan1.NW_018487315v1 C 0 I 1053 e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91751860 748 - 128169293 I a score=974.000000 s hg38.chr7_KI270899v1_alt 19330 3 + 190869 ctc s panTro5.chrUn_NW_015975002v1 1960 3 + 14113 ctc i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6994 3 - 30167 ctc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37723 3 + 85365473 ctg i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378119 26269148 3 + 36383700 cca i saiBol1.JH378119 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91751860 748 - 128169293 I a score=263444.000000 s hg38.chr7_KI270899v1_alt 19333 216 + 190869 ttaggttaatctatagctgatgacagtcagtctagtctacatagcaagcagcttcaagatatgattacttagctaagc-gggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacattcgcaagataaaaattttcttttccttctcaGTATTAAATATGCTGTCACAATAGAAGAAAGCTTTA s panTro5.chrUn_NW_015975002v1 1963 216 + 14113 ttaggttaatctatagctgatgacagtcagtctagtctacatagcaagcagcttcaagatatgattatttagctaagc-gggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacatttgcaagataaaaattttcttttccttctcaGTATTAAATATGCTGTCACAATAGAAGAAAGCTTTA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 6997 216 - 30167 ttaggttaatctatagctgatgacagtcagtctagtctatatagcaagcagcttcaagatatgattacttagctaaga-gggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacattcgcaagataaaaattttcttttctttctcaGTATTAAATATGCTGTCACAATAGAAGAAAGCTTTA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37726 217 + 85365473 ttaggttaatctacagctgatgacagtcagtctagtctacatagcaagcagcttcaagatatgattacttagctaagcggggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacattcgcaaaataaaaagtttctttgctttctcaGTATTAAATATGCTGTCACAATAGAAGAAAGCTTTA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91752608 217 - 128169293 ttaggttaatttatagctgatgtcagtcagtctagtctacatagcaagcagcttcgagagatgactacacagctaagaggggaaattggatgtgactgctgcctcattcccatgcctctctggacctgataatttaaagaaagctcacgttcatcagataaaacatttactttcttTCTCCATATTGAATATGTTGTCACAATAAAAGAAAGCTTTA i calJac3.chr8 I 748 C 0 s saiBol1.JH378119 26269151 217 + 36383700 ttaggttaatttatagctgatgtcagtcagtctagtctacatagcaagcagcttcaaggaataattacctagctaagacaggaaattggacgtgactgctgcctcattcccatgcctctttggacctgataatttagagaaagctcacattcatcagaaaaaatctttcttttctttctcaATATTAAATATGTTGTCACAATAAAAGAAAGCTTTA i saiBol1.JH378119 C 0 I 6204 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=18770.000000 s hg38.chr7_KI270899v1_alt 19549 23 + 190869 CTGACTTCTTAAATGACGTGTTG s panTro5.chrUn_NW_015975002v1 2179 23 + 14113 CTGACTTCTtaaatgatgtgttg i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 7213 23 - 30167 CTGACTTCTtaaatgatgtgttg i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 37943 23 + 85365473 CTGACTTCTtaaatgatgtgttg i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91752825 23 - 128169293 TTGATTTCTGAaatgatatgttg i calJac3.chr8 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e saiBol1.JH378119 26269368 6204 + 36383700 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=16236.000000 s hg38.chr7_KI270899v1_alt 19572 36 + 190869 AGACCGGAACCCTAAAATGATAGTTACTGAGGATAG s panTro5.chrUn_NW_015975002v1 2202 36 + 14113 agaccggaaacctaaaatgatagttactgagaatag i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 37966 36 + 85365473 agaccggaaacctaaaatgatagttactgagaatag i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91752848 36 - 128169293 agaccggaaacccaaagtaatagtgatttagagtag i calJac3.chr8 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e saiBol1.JH378119 26269368 6204 + 36383700 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e gorGor5.CYUI01004482v1 7236 0 - 30167 C a score=3740.000000 s hg38.chr7_KI270899v1_alt 19608 14 + 190869 TGCTAATGCCCTAA s nomLeu3.chr20 38002 14 + 85365473 tgctaatgccctaa i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91752884 14 - 128169293 tgctgatgccctaa i calJac3.chr8 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e saiBol1.JH378119 26269368 6204 + 36383700 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e panTro5.chrUn_NW_015975002v1 2238 0 + 14113 C e gorGor5.CYUI01004482v1 7236 0 - 30167 C a score=100.000000 s hg38.chr7_KI270899v1_alt 19622 1 + 190869 G s calJac3.chr8 91752898 1 - 128169293 g i calJac3.chr8 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e saiBol1.JH378119 26269368 6204 + 36383700 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e nomLeu3.chr20 38016 0 + 85365473 C e panTro5.chrUn_NW_015975002v1 2238 0 + 14113 C e gorGor5.CYUI01004482v1 7236 0 - 30167 C a score=0.000000 s hg38.chr7_KI270899v1_alt 19623 86 + 190869 ACCGGAAACCTAAAATGATAGTTACTGAGAATAGTGCTAATGCCCTAAGACCGGAAACCTAAAATGATAGTTACTGAGAATAGTGC e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e saiBol1.JH378119 26269368 6204 + 36383700 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91752899 0 - 128169293 C e nomLeu3.chr20 38016 0 + 85365473 C e panTro5.chrUn_NW_015975002v1 2238 0 + 14113 C e gorGor5.CYUI01004482v1 7236 0 - 30167 C a score=215.000000 s hg38.chr7_KI270899v1_alt 19709 10 + 190869 taatgcccta s saiBol1.JH378119 26275572 10 + 36383700 tgatgtgttg i saiBol1.JH378119 I 6204 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91752899 0 - 128169293 C e nomLeu3.chr20 38016 0 + 85365473 C e panTro5.chrUn_NW_015975002v1 2238 0 + 14113 C e gorGor5.CYUI01004482v1 7236 0 - 30167 C a score=7897.000000 s hg38.chr7_KI270899v1_alt 19719 36 + 190869 agaccggaaccctaaaatgatagttactgagaatac s gorGor5.CYUI01004482v1 7236 36 - 30167 agaccggaaacctaaaatgatagttactgagaatac i gorGor5.CYUI01004482v1 C 0 C 0 s saiBol1.JH378119 26275582 36 + 36383700 agaccagaaacccaaaataatagtgactgagagtag i saiBol1.JH378119 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91752899 0 - 128169293 C e nomLeu3.chr20 38016 0 + 85365473 C e panTro5.chrUn_NW_015975002v1 2238 0 + 14113 C a score=8202.000000 s hg38.chr7_KI270899v1_alt 19755 15 + 190869 tgctaatgccctaag s panTro5.chrUn_NW_015975002v1 2238 15 + 14113 tgctaatgccctaag i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 7272 15 - 30167 tgctaatgccctaag i gorGor5.CYUI01004482v1 C 0 C 0 s saiBol1.JH378119 26275618 15 + 36383700 tgctgatgccctaag i saiBol1.JH378119 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91752899 0 - 128169293 C e nomLeu3.chr20 38016 0 + 85365473 C a score=-265.000000 s hg38.chr7_KI270899v1_alt 19770 1 + 190869 g s panTro5.chrUn_NW_015975002v1 2253 1 + 14113 t i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 7287 1 - 30167 t i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 38016 1 + 85365473 g i nomLeu3.chr20 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e saiBol1.JH378119 26275633 0 + 36383700 C e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91752899 0 - 128169293 C a score=1061371.000000 s hg38.chr7_KI270899v1_alt 19771 1026 + 190869 ttttagtcacaccctcacctaggcaggaacccaaccaaaagggg-agaactgtggaacaaaCtacgggaggtcattgtttcggtcaccactcccgcattaggccacactgagcaggcaaaaccagaatggagacactcacgctgaatgacacacaacgaagctgaaactttaaggaagtagacagatcccaaaagagctccctttttccctgaagagattccagtctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgatgttaacaaatcagttgttattttctattgctctattt--------ccgccttacacaacacagtgttctgctattgcccagagggcactGAG-------ACCAAATAAAACTTGAAAATGCCACACTGAAAGcaaataagtactaataactcaatttacaacgataacaaagagtgacaccaatgcccaaagttttgatcaatatctcaaaattgagaggctgaccaaaagggaggaattcttacatcaaacaacatttgggCTCTAGAAGCCTCCCAAGGAGTCCTTGTAAAGAGTCGCg-----gccgggcgccgtggctcacgcctgtaatcccggcactttgggaggccgagacgggtggatca--tgaggtcaggaaatcgagaccatcatggcttacaaggtgaaacccagtctctactaaaa---------------------------------------------------aaaaa---tacaaaaaaattagccggatttggtggcggcagcctgcagtcccagctactcgggaggccgggacaggagaatggcatgaacccgggaggcggagcttgctgtgagctgagatcgcgccactgcactccagcctgggcgac-agagcgagactccgcctc-----aaaaaagaaaaaagaagaagaacaa-gaagaa------tcgca-acctaatttagtatagaaacaaactgtaaatctgacttgggaatgtatcatggtaacaaatagcggcggttcagccaatcacatcagccgagtgtcagtcaatggccggcagccagctgttc s panTro5.chrUn_NW_015975002v1 2254 1023 + 14113 ttttagtcacaccctcacctaggtaggaacctaaccaaaagggg-agaaCtgttgaacaaattacgggaggtcattgttttggtcacaactcctgcattaggccacactgagcaggcaaaaccagaatggagacactcacgctgaatgacacacaacgaagctgaaactttaaggaagcagatagatcccaaaagagctccctttttccctgaagagactccagtctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgatattaacaaatcagttgttattttctattgctctattt--------ccgccttacacaacacagtgttctgctattgcccagagggcactGAG-------ACCAAATAAAACTTGAAAATGCCACACTGAAAGCAAATaagtcctaataactcaacttacaacgataacaaagagtgacaccaatgcccaaagttttgatcaatatctcaaaattgagaggctgaccaaaagggaggaattcttacatcaaacaacatttgggCTTTAGAAGCCTCCCAAGGAGTCCTTGTAAAGAGTCGCg-----gccgggcaccgtggctcacgcctgtaatcccggcactttgggaggccgagacgggtggctca--tgaggtcaggaaatcgagaccatcatggcttacaaggtgaaacccagtctctactaaaa---------------------------------------------------aaaaaaaatacaaaaaaattagcgggacttggtggcggcagcctgcagtcccagctactcgggaggccgggacaggagaatggcatgaacccgggaggcggagcttgctgtgagctgagatcgcgccactgcactccag-------------agcgagactccgccta-----aaaaaaaaaGAaagaagaagaagaa-gaagaagaagaaTCgca-acctaatttactatagaaacaaactgaaaacctgacttgggaatgtatcattgtaacaaatagcggcggttcagccaatcacatcagccgagtgtcagtcaatggccggcagccagctgttc i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 7288 1024 - 30167 ttttagtcacaccctcacctaggtaggaacctaaccaaaagggg-agaaCtgttgaacaaattacgggaggtcattgttttggtcacaactcccgcattaggccacactgagcaggcaaaaccagaatggagacactcacgctgaatgacacacaacaaagctgaaactttaaggaagtagatagatcccaaaagagctccctttttccctgaagagattccagtctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgatattaacaaatcagttgttattttctattgctctattt--------ccGCCTTACACAACACAGTGTTCTGCTATTGCCCAGAGGGCACTGAG-------ACCAAATAAaacttgaaaatgccacactgaaagcaaataagtcctaataactcaatttacaacgataacaaagagtgacaccaatgcccaaagttttgatcaatatctcaaaattgagaggctgaccaaaagggaggaatTCttacatcaaacaacatttgggctttagaagcctcccaaggagtccttgtaaagagtcgcg-----gccgggcgccgtggctcacgcctgtaatcccggcactttggga-gccgagacgggtggatca--tgaggtcaggaaatcgagaccatcatggcttacaaggtgaaacccagtctctactaaaa---------------------------------------------------aaaaa---tac-aaaaaattagccggacttggtggcggcagcctgcagtcccagctactcgggaggccgggacaggagaatggcatgaacccgggaggcggagcttgctgtgagctgagatcgcgccactgcactccagcctgggcgac-agagcgagactccgcctc-----aaaaaagaaaaaagaagaagaagaa-gaagaa------tcgca-acctaatttagtatagaaacaaactgaaaatctgacttgggaatgtatcatggtaacaaacagcggcggttcagccaatcacatcagccgagtgtcagtcaatggccggcagccagctgttc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 38017 1032 + 85365473 ttttagtcacaccctcacctaggtaagaacctaaccaaaaggcg-agaaCtgttgaacaaattacaggaggtcactgttttggtcagaactcctgcattaggccacactgggcaggccaaaacagaatggagacactcatgctgaatgacacacaacgaagctgaaactttaaggaagtagatagatcccaaaagagctccctttttccctgaagagattccaatctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgatattaacaaatcagttgttattttctattgctctgttt--------ccgccttaaacaacacagtgttctgctattgcccagaaggcactAAG-------ACCAAATAAAACTTGTAAATGCCACACTGAAAGCAAATAAGTCCTAATAACTCAATTTACAATAATAACAAACAGTGACACCAATGCCCAAAGTTTTGATCAATATCTAAAAATTGAGAAGCTGGCCAAAAGGGAGGAATTCTTACATCAAACTACATTTGGGCTTTAGAAGCATCCCAAAGAGTCCTTGTAAAGAATCGCg-----gccgggtgccgtggctcacgcctgtaatcctggcactttgggaggccaagacgggtggatca--cgaggtcaggaaatcgagaccatccaggcttacaaggtgaaacccagtctatactaaaa---------------------------------------------------aaaaa--atacaaaacaattggccggacgtggtggcggcagcctgtagtcccagctactcgggaggccggggcaggagaatggcatgaacccgggaggcggagcttgcagtgagctgaaatcgcgccactgcactccagcatgggccac-agagcgagactccacctcaaaaaaaaaaaaaaaaaaaaaaaaGGAGAA-GAAgaa------tcgca-acctactttagtatacaaacaaactgaaaatctgacttgggaatgtatcattgtaacaaatagcggaggttcagccaatcatatcagccgagtgtcagccaatggcaggcagccagctgttc i nomLeu3.chr20 C 0 I 2094 s calJac3.chr8 91752899 1075 - 128169293 ttttgctcacactctcacctcggtgagaacctaaccaaagatgg--agaCtgttaaacaaattatgggaagacactgttttggtctgaactcctgcaatgggccactttgaacaggcccaaccacaatggagacagtcatgctgaatgccacacaaccaagctgaaactttacggaagcagatagattgcaaaagcgatcactttttccctgaagagattccagtctaccagagttagcataaggaagtcccctcggctttaattctaaccaaaac----------aagtaacctgatattaaccaatcagttgttattttccattgttctgtttctttgttcccacctt-----acatagtattctgctattgcccagggggcgctAAGAACAACAACAAAAAAAAACTTGTAAATGCCAAACTGAAAACAAAAACATccaaataacccaatttacaatggtagcaaagagtgacatcaatgctcagagctttggtaaatatctcaaaattgagaggctgaggaaggggaagaatTT-TTATATCAAACTACATTTGGGCTTTAGAAGCCTCCAAAGGAGTCATTGTAAAGAACTACAACGTggccaggagtgttggctcatgcctgtaatccaggcactttaggaggctgaggcagaaggatcacctgagttcggaggtttgggaccagcctgaccaacatggggaaagcccgactctactgaaaatacaaaattatataagctgacagacattgtaaggaaaaaaaaaagaa---aaaaaacaaaaaacaaaattagtcgaatgtggtggcacatgcctgtaatcccacctacttggaaggctcaggcaggagaatcgcttgaacctgggaggcagagttagtgatgagctgagattgcactattgcactcaagcctgggcaataagagcaaa---------------aaacaaaacgaaacaaaacaaaaaACAAAACa------ctgcattcctaatttagtatataaagcaactgaaaacctgacttgggaatttatcattgtaacaaagagcagaggttcagccaatcacatcagcggagtgtcaaccaatggcaggcagccagctgttc i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26275633 1083 + 36383700 ttttgctcacgctcttacctaggtgagaacctgaccaaaaagggTTGAACtgttaaacaaattatgggaagacactgttttggtctgaactcctgcattagaccacattgaacaggcctaactacaatggagacagtcatgctgaatgccccacaaccaggctgaaactttacggaagcagatagattgcaaaagcgatcactttttccctgaggagattcctgtctaccagagtcagcataaggaagtcccctcggctttaactctaaccaaaacaagtaagctgaagtaatctgatattaaccaatcagttgttattttctatcattccgtttctttgttcccaccttacaaaacatagtattctgctattgcccagtggGTGCTAAG-------ACCAAATAAaacttgtaaatgccacactgaaagcaaatacatccaaataattcaatatacaatggtagcaaagagtaacaccaatgctcaaagctttggtaaatatctcaaaattgagagcctgaccaaaggggaggaatt-ttacatcaaactacattgggg-tTTAGAAGCCTTCAAAGCAGTCCTTGTAAAGAACTGCAGCCT-gccaggaggtgtggctcatgcctgtaatcccagcactttgggagtctgaggcaggaggatcacctgagttcgggggtttgagaccagcctgaccagcatggagaaaccccatctctactaaaaatacaaaattatatgagcagacagacattgtaggaaaaaacaaaacaaaacaaaaaaacaaaaacaaaattagtcggatgtggtggcgcatgccggtaatcccaactacctggcaggctgaggcgagagaattgcttgaatccgggaagcagagttagtgatgagctgacattgcaccattgcattcaagcctaggtaacaagagcaaa---------------aaacaaaaacaaac-aaacaaacaa-aaaACC------ctgca-tcctaacttagtatataaacaaactgaaaacctgacttgggaatttatcattgtaacaaagagcagaggttcagccaatcacatcagctgagtgtcagccaatggcaagcagccagctgttc i saiBol1.JH378119 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=1581569.000000 s hg38.chr7_KI270899v1_alt 20797 1409 + 190869 aaaacaagttccaagaaggcaaatccgggctgtaaccaggtctgtaaccaatccagccacctctatacctcacttctgttttctgtatgtcacttt-ttttctctggctataaatataacccgcacatgttgtgtggcagatcattctgaaccatttttggtctggactgctgcctgattctagaaccacaaaaaaa-gccaattaagatctgcaaacccacatttgttgtaattttgtattttaacaGTTGTGCCCTACAAAAGACATTAAGCTGAAATTAATTAAAAATCATTTACGGTCATGATTAGGTCATAAAAAATTGTCAAACATAACAATTCTTCAAAAAA-AGCTAAAAAGTATATTTTAAAAACATTGTTGATGGAaaaaagagtgcaaaagtagataggaaaattatgtacaaaactaaaaacagaggagaaattaaaagtc---------aaataattgcatcaaactggaaacct----agaaaaaatgggtgatttcctagtaaaaatacacattaacaaaatgggcactgaaataaggcaactatgaatataccaattagcatagaaaagctaagaaaggtccttaaagatctcccagtggaaaaaggccccaggaccatctgggtccatagctTAGTGTAAGCTGAC-TTAACTAAATGTGATTTTACACTCGTGCattgcatacatacgatggtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacgcattaccttttctctgttctgataccatgaaaggaaaataaatctcaggacccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaggcaaacctgcc-ctcattctattcctaa----gatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttccttttggacaaaggacagacagcactcaaagtcatcc--------ctcacctgagacagatgcatatctgattgcttcctctgccctattatttatgtaaaaatgcagattcattgagccagactaaattgtgtat--tcagtggaaggctgatgaaggattc-aaaagaatgcaaccttttgtctctaacctacttctgacctggaagcacccccacttcctgcttccagttgtcccgccttactgggccaaatgactgtacatcttacacgtctcatgtatccctaaaatgtacaaaagcaagctctaccctggccaccttggacacacgtcgtcaggacctcctgaggc---------tgtgtcatgggcgtgtccttaatcttggcaaaataagctttctaaattgactgagacctgtctcagatattctgggatcacaatctacaatcac-catggtgttatggttgactacagc s panTro5.chrUn_NW_015975002v1 3277 1410 + 14113 aaaacaagttccaagaaggcaaatccgggctgtaaccaggtctgtaaccaatccagccacctctatacctcacttctgttttctgtatgtcacttt-ttttctctggctataaatttaacctgcacatattgtgtggcagatcattcggaaccatttttggtctggactgctgcctgattctagaaccacaaaaaaaagccaattaagatctgcaaacccacatttgttgtaattttgtattttaacaGTTGTGCCCTACAAAAGACATTAAGCTGAAATTAATTAAAAATCATTTACGGTCATGATTAGGTCATAAAAA-TTGTCAAACATAA---TTCTTCAAAAAA-AGCTAAAAATTATATTTTAAAAATATTGTTGATGGAAAAAAGAGTGCAAAAGTAGATAGGAAAATTATGTACAAAACTAAAAACAGAGGAGAAATTAAAAGTC---------AAATAATTGCATCAAACTGGAAACCT----AGAAAAAATGGGTGATTTCCTAGTAAAAATACACATTAACAAAATGGGCACTGAAATAAGGCAACTATGAATATACCAATTAGCATAGAAAAGCTAAGAAAGGTCCTTAAAGATCTCCCAGTGGAAAAAGGCCCCAGGACCATCTGGGTCCATAGCTTAGTGTAAGCTGAC-TTAACTAAATGTGATTTTACACTAGTGCattgcatacatatgatggtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacgcattaccttttctctgttttgataccatgaaaggaaaataaatctcaggacccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaggcaaacctgcc-ctcattctattcctaactaagatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttccttttggacaaaggacagacagcactcaaagtcatcc--------ctcacctgagacagatgcatatctgattgcttcctctgccctattatttatgtaaaaatgcagattcattgagccagactaaattgtgtat--tcagtggaaggctgatcaaggattc-aaaagaatgcaaccttttgtctccaacctacttctgacctggaagcacccccacttcctgcttccagttgtcccgccttactgggccaaatgactgtatatcttacacgtctcatctatccctaaaatgtacaaaagcaagctctaccctggccaccttggacacatgtcgtcaggacctcctgaggc---------tgtgtcaagggtgtgtccttaatcttggcaaaataagctttctaaattgactaagacctgtctcagatattctgggatcacaatctacaatcac-catggtgttatagttgactgcagc i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 8312 1411 - 30167 aaaacaagttccaagaaggcaaatccgggctgtaaccaggtctgtaaccaatccagccacctctatacctcacttctgttttctgtatgtcacttt-ttttctctggctataaatataacccgcacatgttgtgtggcagatcattctgaaccatttttggtctggactgctgcctgattctagaaccacaaaaaaaaagccattaagatctgcaaacccacatttgttgtaattttgtattttaacaGTTGTGCCCTACAAAAGACATTAAGCTGAAATTAATTAAAAATCATTTAC-GTCATGATTAGGTCATAAAAAATTGTCAAACATAACAATTCTTCAAAAAA-AGCTAAAAAGTATATTTTAAAAATACTGTTGATGGAAAAAAGAGTGC-AAAGTAGATAGGAAAATTATGTACAAAACTAAAAACAGAGGAGAAATTAAAAGTC---------AAATAATTGCATCAAACTGGAAACCT----AGAAAAAATGGGTGATTTCCTAGTAAAAATACACATTAACAAAATGGGCACTGAAATAAGGCAACTATGAATATACCAATTAGCATAGAAAAGCTAAGAAAGGTCCTTAAAGATCTCCCAGTGGAAAAAGGCCCCAGGACCATCTGGGTCCATAGCTTAGTGTAAGCTGAC-TTAACTAAATGTGATTTTACACTCGTGCATTGcatacatatgatggtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacaaattactttttctctgttctgataccatgaaaggaaaataaatctcagga-ccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaggcaaacctgcc-ctcattctattcctaactaagatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttccttttggacaaaggacagacagcactcaaagtcatcc--------ctcacctgagacagatgcatatctgattgcttcctctgccctattatttatgtaaaaatgcagattcattgagccagactaaattgtgtat--tcagtggaaggctgatgaaggattc-aaaagaacgcaaccttttgtctctaacctacttctgacctggaagcacccccacttcctgcttccagttgtcccgccttactgggccaaatgactgtacatcttacacgtctcatgtatccctaaaatgtacaaaagcaagctctaccctggccaccttggacacacatcgtcaggacctcctgaggc---------tgtgtcacgggcgtgtccttaatcttggcaaaataagctttctaaattgactgagacctgtcccagatattctgggatcacaatctacaatcac-catggtgttatggttgactacagc i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 41143 1409 + 85365473 aaaacaagttccaagaaggcaaatctgggctgtaaccaggtctgtaaccaatccagccatctccatacctcacttctgttttctgtatgtcacttt-ttttctctggctataaacataa----cacatgttgtgtggcagatcattctgaaccatttttggtctggattgctgcctgattctagaaccacaaaaaaaagccaattaagatctgcaaacccacatttgttgtaattttgtattttaacaGTTGTGCCCTGCAAAAGACATTAAGCTGAAATTAATTAAAAATCATTTACGGTCATGATTAGGTCATAAAAAATTGTCAAACATAACAATTCTTCAAAAAA-AGCTAAAAAGTATATTTTTAAAATATTGTTGATGGAAAAATGAGTGCAAAAGTAGATAGGAAAACTATGTACAAAACTAAAAACAGAGGAGAAATTAAAAGTC---------AAATAATtgcatcaaactggaaacct----agaaaaaatgggtgatttcctagtaaaaatacacattaacaaaatgggcactgaagtaaggcaactatgaatagaccaattagcatagaaaagctcggaaaggtccttaaagatctcccagtggaaaaaggccccaggaccatctgggtccatagcTTAGTGTAAGCTGAC-TTAACTAAATGTGAGTTTACACTCGTGCattgcatacatctgatagtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacacattaccttttatgtgttttgataccatgaaaggaaaataaatctcaggacccccaaatcaccaagccaagggaaaagtcaagctgggagctatgtcaggcaaacttgcc-ctcattctattcctaagtaagatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttcctttaggacaaaggacagacagaatgcaaagtcatcc--------ctcacctgagaccaatgcatatctgattgcttcctctgccctattgtttatgtaaaaatgcagattcattgagccggactaaattgtgtat--tcagtggaaggctgatcaaggattc-aaaagaatgcaaccttttgtctctaacctacttctggcctggaagcacccccacttcctgcttccagttgtcctgccttactggaccaaatgactgtacatcttacacgtctcatgtatccctaaaacgtataaaagcaagctctaccctggccaccttgggcacatgttgtcaggacctcctgaggc---------tgtgtcatgggcgtgtccttaatcttggcaaaataagctttctaaattgactgagacctgtctcagatattctgggatcacaatctgcaatcac-cacggtgtt-tggctgactacagc i nomLeu3.chr20 I 2094 C 0 s calJac3.chr8 91753974 1405 - 128169293 aaaacaggttccttgaagagaaatgc-ggctgtaaccaactctttaaccaatccagccatctctatacctcacttctgttttctgtatgtcactttcctttctctggctataaatataccctgcacatgtcgtgtggcagagcattctgaaccatttttggtctggacagctgcccgattctacaaccacaaacgaaagccaattaagatttgtaaacctacatttgttgtaattatgtcttttaacaGTTGGATCCTGCAAAAGACATTAAGCTAAAATTAATAAAAAATCATTTAAGGTCATAATTAGGTCATAAGAAATTGTCA-----AACGATTCTTCAAAAAACAGCTAAAAAGTGTATTTTAAAAATATTGTTGAT---AAAAAAAGTACAAAAGTAGATAGAAAAATTATGGACAAAACTAAAAAC--AGGAGAAATTAAAAGTAAAATAAGAGAACCAATTGCATCaaactgaaaacct---taaaaaaaatggacgatttcctagtaaaaatacacattaacaaaatgggcaatgaagtaaggcaactaccaacagaacaattagaatagaaaagcttggaaaggtccttaaagatctcccagtag-aaaagagccaaggaccatctgggttcatagctTAGTGTAAGCTGACTTTAACTAAATGTGATTTTATAGGCATGCatcacgtacat--gatagtggttccatgagataataatgtagctgaaaaatttcttcctagccatcttgtcataagctcatggctcaactcattacctgatctaagttttgataccttaaaaggaaaataaatctcaaaacccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaagcaaatctgcctctcattctattactaaataagagcgccacaaagataaaaatctacatacctccctcacaatttgtccacaagtaatttccttgtggacaaaaaacaaacagaactc--agtcatccctctgaggctcactggagacaaatgtatatttaattgattcctctgtcctattgtttatgtaaaaatgaagattcactaagccagactaaattgtgtattctcggtggaaggctgatcaagggttc-aaaagaatgcaaccttttgtgtcttatctacttctgacttggaagcaccaccacttcctgcttccagtggtcacaccttactggaccaaacaactacacatattaattg-----------------atgtgtaaaa-caagcactacactgaccaccatggacatatgttgtcaggacctcctgaggcggtg-----tgtgtaatgggcgtgtccttaaccttggcaaaatacactttctaaattg----agacctgtctcagatattttgggttcacaatccacaattgcacatggtgttatagttaactacagc i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26276716 1392 + 36383700 aaaacaggtttcatgaaggcaaacgcaggctgtaaccagatctttaatcaatccagccatctctatacatcact--tgttttctgtatgtcagtttcctttctctggctgtaaatataccctgcacatgtcatgtggcagagccttcggaaccatttttggtctggattgct----gattctacaaccat-aataaaagccagttaagatctgtaaacatacatttgctgtaattctctcttttaacaGTTGGATCCTGCAAAAGACATTAAGCTAAAATTAATTAAAAATCATTTAAGGTCATAATTAGGTCATAAGAAATTGAC------AACAATTCTTCAAACAGCAGCTAAAAAGTATATTTTTAAAATATTGTTG------AAAAAAGTGCAAAAGTAGATAGAAAAATTATGGACAAAACTGAAAAT--AGGAGAAATTAAAACTA----AAGAGAACCAATTGCATCAAACTGAAAACTTAAAAAAAAAAAAAGGGTGATTTCTTAGTAAAAATACACATTAACAAAATGGACACTGAAGTAAGGCAACTATGAATCAAACAATTAGCATAGAAAAGCTTGGAAAGGTCCTTAAAGATCTCCCAGTGG-AAAAGACCCAAGGACCATCTGGGTCCACAGCTTGGTGTAAGCGGACTTTAACTAAATGTGATTTTATAGTCATGCATGgcatacat--gatggtagtcccatgagataataacggagctgaaaaattcctttctagccatcttgttgtaagcttgtggctcaacgaattaccttttctaagttttgataccataaaaggaaaataaatctcagaaccccaaaatcactaagccaaggg-aaagtcaagctgggagctatgtcaggcaaacctgcctctcattctattactaaataagatagccacaaagataaaaatctacattcctccctcccaatttacccacgaggaatttccttgtggacaaa----tgacagaact----gtcatccctctgaggctcactagagacaaatgtatatttaattgattcctctgccctgttgtttatgtacaaatgaagattcactgagccagactaaatcatgtat--tcagtggaaggctgatgaagcactcaaaaagaacgtaacattttgtctcttatctacttctgacctggaagcacccccacttcctgcttccagttgtcccgctttactggaccaaatgactacacatattaattg-----------------atgtgtaaaagcaagctctaccctgaccacctcggacacatgccgccaggacctcctgaggctgtgtgtaatgtgtaatgggcatgtctttaaccttggcaaaatacgctttctaaattg----agacctatctcagatattttgggttcacaatccaccattacacgtggtgttacagttaacgactgc i saiBol1.JH378119 C 0 C 0 e aotNan1.NW_018487315v1 5688598 1053 - 15679484 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=582205.000000 s hg38.chr7_KI270899v1_alt 22206 406 + 190869 attcagtacagagacatgctgtacaggttcgtagcctgggagc-aataggctatactatgtaacttaggtgtggagtgggctacaccatctaagttttataaggacactctacagtgttcacacaaagatgaaatcacctaaggacagatttctcagaaagtat-aacatcgttacgagatgcctgagtgTATT-------------------------------------------------------------------------------------------------------------TTAAATGGTCAAAGCCTAGGAG--AAAAAAAGAAACTTAACTCTTGTTATGGGTTAATAACGAAGCTTAAGAGAGTTAAcatatttcatctaatctaagatgccaatgattaaaagacattactttatgcaccatcacaaataggttgccaattaaacCGACTTTCTGAATAACACACAAATGTGAATTTACTTCTATTAATGCCAGGAAAGTAAA s panTro5.chrUn_NW_015975002v1 4687 406 + 14113 attcagtacagagacatgctgtacaggttcgtagcctgggagc-aataggctatactatgtaacttaggtgtggagtgggctacaccatttaagttttataaggacactctacagtgttcacacaaagatgaaatcacctaaggatagatttctcagaaagtat-aacatcgttacgagatgcctgagtgTACT-------------------------------------------------------------------------------------------------------------TTAAATGGTCAAAGCCTAGGAG--AAAAAAAGAAACTTAACTCTTGTTATGGGTTAATAACAAAGCTTAAGAGAGTTAAcatagttcatctaatctaagatgccaatgattaaaaaacattattttatgcaccatcacaaataggttgccaattaaacCGACTTTCTGAATAACACACAAATGTGAATTTACTTCTATTAATGCCAGGAAAGTAAA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 9723 406 - 30167 attcagtacagagacatgctgtacaggttcgtagcctgggagc-aataggctatactatgtaacttaggtgtggagtgggctacaccatctaagttttataaggacactctacagtgttcacacaaagatgaaatcacctaaggacagatttctcagaaagtat-aacatcgttacgagatgcctgagtgTATT-------------------------------------------------------------------------------------------------------------TTAAATGGTCAAAGCCTAGGAG--AAAAAAAGAAACTTAACTCTTGTTATGGGTTAATAACAAAGCTTAAGAGAGTTAAcatatttcatctaatctaagatgccaatgattaaaagacattattttatgcaccatcacaaataggttgccaattaaactGACTTTCTGAATAACGCACAAATGTGAATTTACTTCTATTAATGCCAGGAAAGTAAA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 42552 408 + 85365473 gttcagtacagagacatgttgtacaggtttgtggcctgggagc-aataggctatactatgtagcttaggtgtggagtgggctacaccatctaggttttctaagaacactctacagtgttcgcacaaagatgaaatcacctaaggacagatttctcagaaagtat-aacatcgttacaagatgcttgagtgTATT-------------------------------------------------------------------------------------------------------------TTAAATGGTCAAAGCCTAGGAGAAAAAAAAAGAAACTTAACTCTTGTTATGGGTTAACAACAAAGCTTAATAGAGTTAAcatatttcatctaatctaagatgccagtgattaaaagacattattttatgcaccatcacaaataggttgccaattaaacCGACTTTCTGAATAACACACCAATGTGAATTTACTTCTGTTAATGCCAGGAAAGTAAA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91755379 469 - 128169293 atttagtacagtgacatgctgtccaggttggtagcctgggagc-aacaggctataccgtataacttaggtgtgaagtgggatacacaatctaggcttgataaggaca--ctgaggtgttcattaaaaaataaaatcacctaaagacaaatgtctcagaaagtatccctatcgttGGGACATGCTTCTGCGTATTTTCTTCTTTTTTAAATTTTACTTTGTATTTTTCCTTTGCTTCAGACA---------------------------------TAGATGGTTGTTTGAACCTTGTGTATATTTTAAATAGCCAAAGCCTAGGAG--AAAAAAAGAAACTCAATTTCTGTTATAGTT---TAATAAAGCTTAATAGAGTTAATAtgttccttctaatctgagatgccaatgattaaaagacattattttatg------cacaaataggttgccaattaaacCGAC-TTCTGAATAACAAA--AATGTAACTTTACGTGTATTAATACCAGGAATGAAAA i calJac3.chr8 C 0 I 273 s saiBol1.JH378119 26278108 480 + 36383700 atttagtacagtgacatgctgtccaggttggtagcctgggagcaaataggctataccatataacttaggtgtggaatgggatacactatctaggtttgataaggacactctatggtgttcattcaaaaatgaaatcacctgaagacaaatgtctcagaaagtatccacatAATTGGGACATGCTGGTGTGTATTTTTTTTTCTCTT---TTTTA------------------------AAAATTTCGCTTTATATTTTTCTTTTGCCTCAGACATAGAAGGTTGTTTGAAACTTGTGTGTA--TTAAATGGCCAAAGTCTAGGAG--AAAAAAAGAAACTCAACTCCTGTTATAA-----TAACAAAGCTTAATAGAGTTAAcatattccatctaatctaagatgccaatgattaaaag-cattattttatgcaccatcacaaataggttgccaattaaacCGACTTTCTGAATAATAAA--AACGTGAATTTACTTCTATTAATGCCAGGAAACTAAA i saiBol1.JH378119 C 0 C 0 s aotNan1.NW_018487315v1 5689651 395 - 15679484 attcagtacagagacgtgctatacaggttaatagcctgggagc-aataggctataccgtataacttatgtgtggagtgggctacaccatctaggttttataaggacaccctacggtgttcgcacaaagatgaaatca-ctaaggacagatttctcagaaagtatccacatcattaggagatgcttgagtgTATT-------------------------------------------------------------------------------------------------------------TTAAATGGTTAAAGCCTAGAAG-AAAAAAAAGAAACTCAACTCCTGTTATGATTTAGTAACAAAGATTAAT--AGTTAAcatatttc-----atctaagatgccaatgattaaaagac---attttatgcaccatcacaaataggttgccaattaaacCGACTTTGTGAATAACAAA--AATGTGAATGTACTTCTATTCATGCCAGGAAAGTAAA i aotNan1.NW_018487315v1 I 1053 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=8010.000000 s hg38.chr7_KI270899v1_alt 22612 7 + 190869 ATGAAAA s panTro5.chrUn_NW_015975002v1 5093 7 + 14113 ATGAAAA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10129 7 - 30167 ATGAAAA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 42960 7 + 85365473 ATGAAAA i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378119 26278588 7 + 36383700 ATGAAAA i saiBol1.JH378119 C 0 I 329 s aotNan1.NW_018487315v1 5690046 7 - 15679484 ATTAAAG i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91755848 273 - 128169293 I a score=1336.000000 s hg38.chr7_KI270899v1_alt 22619 2 + 190869 AT s panTro5.chrUn_NW_015975002v1 5100 2 + 14113 AT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10136 2 - 30167 AT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 42967 2 + 85365473 AT i nomLeu3.chr20 C 0 C 0 s aotNan1.NW_018487315v1 5690053 1 - 15679484 -T i aotNan1.NW_018487315v1 C 0 C 0 e saiBol1.JH378119 26278595 329 + 36383700 I e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91755848 273 - 128169293 I a score=40335.000000 s hg38.chr7_KI270899v1_alt 22621 40 + 190869 AAATTATGGTTTTGACATGTTAAAGCAAATACGGCGGGGG s panTro5.chrUn_NW_015975002v1 5102 40 + 14113 AAATTATGGTTTTGACAtgttaaagcaaataaggcggggg i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10138 40 - 30167 AAATTATGGTTTTGACAtgttaaagcaaatacggcggggg i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 42969 40 + 85365473 AAATGACGGTTTTGACATGTTAAAGCAAATAAGGCGGGGG i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378119 26278924 40 + 36383700 AAGTTATGGTTTTGAGATGTTATAGCAAATAAGGAGGCCT i saiBol1.JH378119 I 329 C 0 s aotNan1.NW_018487315v1 5690054 40 - 15679484 GAATTATGGTTTTGCTGTGTTAAAGCAAAAAAGGAGGCCG i aotNan1.NW_018487315v1 C 0 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I e calJac3.chr8 91755848 273 - 128169293 I a score=389752.000000 s hg38.chr7_KI270899v1_alt 22661 285 + 190869 TT--AGCCTGAGGCCTTCCCTAAGCAAACAGAAACCGAACTTGGAGGCATTTGAACTGACTT-AAAAAAATTAACAAACCAACCACAGTCAATGCCAAAAAGCCCAGCAGCCAGTTGGCTGTATGACTAGGGACGCTGAGGGAACCATCCCCACAACAGGCGGTGGCCTAGCTGGAGCCACTGAGGAGCCTCACTTAGGGGCCA-CCCTAAGAGCTCgaagccccaagcc--gatttccgttctggtgcttcccgcgtgattcatgaaccattcctttgccgaaataaact s panTro5.chrUn_NW_015975002v1 5142 285 + 14113 tt--agcctgaggccttccctaagcaaacagaaaccgaacttggaggcatttgaactgactt-aaaaaaattaacaaaccaaccacagtcaatgccaaaaagctcagcagccagttggctgtatgactagggacgctgagggaaccattcccacaacaggcggtcgcctagctggagccactgaggagcctcacttaggggcca-ccctaagagctcaaagccccaagcc--gatttccgttctggtgcttcctgcgtgattcatgaaccattcctttgctgaaataaact i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10178 285 - 30167 tt--agcctgaggccttccctaagcaaacagaaaccgaacttggaggcatgtgaactgactt-aaaaaaattcacaaaccaaccacagtcaatgccaaaaagcccagcagccagttggctgtatgactagggacgctgagggaagcatccccaccacaggcggtcgcctagctggagccactgaggagcctcacttacgggcca-ccctaagagctcgaagccccaagcc--gacttccgttctggtgcttcctgcgtgattcatgaaccattcctttgccgaaataaact i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43009 285 + 85365473 TT--AGCCTGAGGCCTTCCCTAAGCAAACAGAAACCGAACTGGGAGGCATTTAAACTGACTT-AAAAAAATTAACAAACCAACCACAGTCCGCGCCAAAAAGCCCGGCAGCCGGTT-GCTGTGTGACTAGCGACGCTGAGGGCACCATCCCCACAGCAGGCGGTCGCCTAGCTGGAGCCACTGAGGAGCCTCCCTTAGGGGCCACCCCTAAGAGCTGGAAGCCCCACGCC--CTTCTCCGTCCTGGGGCTTCCTGCGTGACTCATGCCCCATTCCTTTGCTGACAGAAACT i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756121 280 - 128169293 TT--AGCCT---GTCTTGCCTAAGCAAACAAAAGCCAAACTTGGAGGCATTTAAACTGACTT----AACA-TGACAAATCAACCACAGTCAATAACAAAACGCCCCGCCGCCAGGTGGCTGTCTCACTAGGCATGCTGCGGGAACCACCCACCCAGCAGG-GGTGGCCTAGCTGAAgccaataaaaaacctcactcagctgccaccactaaaagctggacgctccaagccctgttttcccttctggtgctccgtgcgtgattcatgaattgttcatttgctcaaataaact i calJac3.chr8 I 273 C 0 s saiBol1.JH378119 26278964 284 + 36383700 TTAGAGCCTGAGGTCTTTCCTAAGCAAACAAAAACCAAACTCGCAGGCATCTAAACTGACTT----AATATTAACAAATCAACCACAGTCAATGACAAAACGTCCCGCCGCCAGGGGGCTGTATGACTAGGGAAGCT--GAGAACCATCCCCATAGCAGG-GGTGGCCCAGCTGGAGCCGATGAaaaacctcactccgctgccgcagctaagggcgggaagccccaagccctgttttcccttctgctgcttcgtgcgtgattcatgaatcgttcatttgctcaaataaact i saiBol1.JH378119 C 0 C 0 s aotNan1.NW_018487315v1 5690094 287 - 15679484 TT--AGCCTGAGATCTTCCCTAAGCAAACAGAAACCGAACTTGGAGGCATTTAAACTGACTTTAAAAAAA-CAACAAACCAACCATGGTCAATGACAAAAAGCCCAGCCGCCAGTCGGCTATATGACTAGGGCTGCTGAGGGAaccatccccacagcaggcggtcgcctagctggagccaaggaggaacctcacttagctgccaccactaagagctcgaagccccaagccctgttttccatt-tggtgcttcaggcgtgattcacgaaccattcctttgctcaaataaact i aotNan1.NW_018487315v1 C 0 N 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=66062.000000 s hg38.chr7_KI270899v1_alt 22946 70 + 190869 ccgcttaaatttattttacctaaaa---tccttttaacaGACAAAGTCCAGTATTTACACTTAAAACACGGTT s panTro5.chrUn_NW_015975002v1 5427 70 + 14113 ccgcttaaatttattttacctaaaa---tccttttaacaGACAAAGTCCAGTATTTACACTTAAAATACGGTT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10463 70 - 30167 ccgcttaaatttattttacctaaaa---tcctgttaacaGACAAAGTCCAGTATTTACACTTAAAATACGGTT i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43294 70 + 85365473 CCGCTTACATTTATTTTGCCTCAAA---TCCTTTTAACAGACAAAGTCCAGTATTTGCACTTACGATACGGTC i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756401 69 - 128169293 ctgcttaaatttattttgcctaaaagtctcctttga----acaAAGTACACTATTTACACTTAAAATAATGTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26279248 69 + 36383700 ctgcttaaaattattttgcctaaaagtctcctttga----acaAAGTACACTATTTACACTTAAAATGATGCG i saiBol1.JH378119 C 0 C 0 e cebCap1.NW_016107703v1 369623 436 - 2125214 I a score=102187.000000 s hg38.chr7_KI270899v1_alt 23016 68 + 190869 GTGAAAACTCACATCTACATCTGCTCTTCAATATTTTTCAAGTACTTTAACACTCTAAGAAAAACGAG s panTro5.chrUn_NW_015975002v1 5497 68 + 14113 GTGAAAACTCACATCTACATCTGCTCTTCAATATTTTTCAAGTACTTTAACACTCTAAGAAAAACGAG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10533 68 - 30167 GTGAAAACTCACATCTACATCTGGTCTTCAATATTTTTCAAGTACTTTAACACTCTAAGAAAAACGAG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43364 68 + 85365473 GTAAAAACTCACATCTACATCTGCGCTTCGATATTTTTCGAGTACTTTAATACTGTAAGAAAAACGAG i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756470 65 - 128169293 GTGAAAACTCACATCTCCATCTGCTCTTCAATATTTTTCAAGTAC-TCAACCC--TAAGAAAAACCAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26279317 65 + 36383700 GTGAAAACCCGCATCTCCATCTGCTCTTCAGTATTTTTCAAGTAC-TCAACGC--TAAGAAACACGAG i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 370059 67 - 2125214 GTGAAAACTCACATCTCCATCTGCTCTTCAATAGTTTTCAAGTAC-TCAACACTGTAAGAAAAACGAg i cebCap1.NW_016107703v1 I 436 I 166 a score=279308.000000 s hg38.chr7_KI270899v1_alt 23084 266 + 190869 CCACTGGAACGCAAATAAAAGCAAGTCGTGGGGTGCGCGTCTCCCTGGGGCTCTCCATGTTGCCCTCAGGGTTTCTCCCTTCTCTGTCCCGGATCCACCCCAAACAAACCCAAATTGGTCAAAAATTAAAAAATGAAACAACTCAGGTATGCTGTAATAATGAATAACAAAGCCACTTAATGATGGGCCACTTTGTAAAATAAAATAAATACAACTTGAGAAAGTGGAGCGCGAGGCAGCGCGGCCTCCTCCGCACT--GAGCCGGGA s panTro5.chrUn_NW_015975002v1 5565 266 + 14113 CCACTGGAGCGCAAATAAAAGCAAGTCGTGGGGTGCGCGTCTCCCTGGGGCTCTCCATGTTGCCCTCAGGGTTTCTCCCTTCTCTGTCCCGGATCCACCCCAAACAAACCCAAATTGGTCAAAAATTAAAAAATGAAACAACTCAGGTATGCTGTAATAATGAATAACAAAGCCACTTAATGATGGGCCACTTTGTAAAATAAAATAAATACAACTTGAGAAAGTGGAGCGCGAGGCAGCGCGGCCTCCTCAACACT--GAGCCGGGA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10601 266 - 30167 CCACTGGAACGCAAATAAAAGCAAGTCGTGGGGTGCGCGTCTCCCTGGGGCTCTCCATGTTGCCCTCAGGGTTTCTCCCTTCTCTGTCCCGGATCCACCCCAAACAAACCCAAATTGGTCAAAAATTTAAAAACGAAACAACTCAGGTATGCTGTAATAATGAATAACAAAGCCACTTAATGATGGGCCACTTTGTAAAATAAAATAAATACAACTTGAGAAAGTGGAGCGCGAGGCAGCGCGGCCGCCTCAGCACT--GAGCCGGGA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43432 266 + 85365473 CCACTGGAACGCAAATAAAAGCAAGTCGTGGGGTGCGCGTCTCCCTGGGGCTCCCCGTGTTGCCCTCAGGGGTCCTCCCTTCTCTGTCCCGGATCCACCCCAAACAAACCCAAATTGGGCAAAAACTAAAAATTGAAACAACTCAGATATGCTGTAACGATGAATAACAAAACCACTTAATGAAGGGCCACTTTGTAAAAGAAAATAAATACAACTCGAGAAAGTGGAGCGCAAGGCAGCGCGGCCTCCCCAGCGCT--GAGCAGGGA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756535 260 - 128169293 CCACTGGAACGTGAATAAAACCAAGCAGTGGGGTGCGCGGCTCCCCGGGGCTCCCCGCACTGCTCTCAGGGTTTCTCCCTTCTCTGTTGCAGATCCACCC----CAAACCCAAATTGGTAAAAAAATTAAAAATGAAACAACTCAGGTGTGCTGTAATAGTGAACATCAAAGCCACTCAGTGAAGGGCCACTTTGTAAACGAAAATAAATACAACTTGCGAAACTAAAGC-CAC-GCAGCGCAGCCTCCTCA-CACTCAGGGCGCTG- i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26279382 261 + 36383700 CCACTGGCACGCGAACACAGCCAGGGAGCGGGGTGCGCGGCTCCCTGGGGCTCCCCGCGCCGCTCTCGGGGTTT-TCCCTTCTCTGTCGCAGATCCACCC----CCAACCCAAATTGGTAAAAGATTTAAAAATGAAACAACTCAGATGTGCTGTAATAACGAACATCAAAGCCACTCGACGAAAGGCCACTTTGTAAAATAAAATAAACACAGCTTGAGAAAATAAAGC-CACGGCGGCGCCGCCCCCTCAGCACTCGGAGCGCGG- i saiBol1.JH378119 C 0 C 0 e cebCap1.NW_016107703v1 370126 166 - 2125214 I a score=111764.000000 s hg38.chr7_KI270899v1_alt 23350 79 + 190869 CAGAAAGCTTTTTCCTCACCTTTCCTCGGGCAGCCTCGGGGACCATGAAGCCACAGCTTCCCCAGTCGTTCCTGAGGAG s panTro5.chrUn_NW_015975002v1 5831 79 + 14113 CAGAAAGCTTTTTCCTCACCTTTCCTCGGGCAGCCTCGGGGACCATGAAGCCACAGCTTCCCCAGTCGTTCCTGAGGAG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10867 78 - 30167 CGGAAAGC-TTTTCCTCACCTTTCCTCGGGCAGCCTCGGGGACCATGAAGCCACAGCTTCCCCAGTCGTTCCTGAGGAG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43698 79 + 85365473 CAGAAAGCTCTTTCCTCACCTTTCCTCAGGCAGCCTCGGGGGCCATGAAGCCACAGCTTCCCCAGTCGTTCCTGAGGAG i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756795 70 - 128169293 CAGAAAGCTTGTTTCTCACCTTTCCTCAGGCAGCTTTGGGGGTCCTGAAGCCAC-GTTTCCCCAGTCGCTC-------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378119 26279643 71 + 36383700 CAGAAAGCTGTTTCCTCACCTTTCCTCAGGCAGCTCTGGGGGTCCTGAAGCCACTGCTTCCCCAGTCGCTC-------- i saiBol1.JH378119 C 0 C 0 s cebCap1.NW_016107703v1 370292 78 - 2125214 CAGAAAGCTTTTTCTTCACCTTTCCTC-GGCAGCCTCTGGGGTTCTGCAGCCACAGCTTCCCCAGTCAGTCCTGAGGAG i cebCap1.NW_016107703v1 I 166 I 5187 a score=147540.000000 s hg38.chr7_KI270899v1_alt 23429 130 + 190869 CTGAGGAGAAGGAGGCTGGGTCGTCCCTGGCCACGGTCCCCAGGTGTTCCTAGAGAGCCAGCGGCGTCTCCCGAGTGGGTCCTGAGGAGGAGGAGGCTGGGCCCTCT-CAGGTGTCCCTGTAGGGATGACG s panTro5.chrUn_NW_015975002v1 5910 130 + 14113 CTGAGGAGAAGGAGGCTGGGTCGTCCCTGGCCACGGTCCCCAGGTGTTCCTATAGAGCCAGCGGCGTCTCCCGAGTGGGTCCTGAGGAGGAGGAGGCTGGGTCCTCT-CAGGTGTCCCTGTAGGGATGGAG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 10945 130 - 30167 CTGAGGAGAAGGAGGCTGGGTGGTCCCTGGCCACGGTCCCCAGGTGTTCCTATAGAGCCAGCGGCGTCTCCCGAGTGGGTCCTGAGGAGGAGGAGGCTGGGTCCTCT-CAGGTGTCCCTGTAGGGATGACG i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43777 129 + 85365473 CTGAGGAGAAGGAGGCTGGGTCGTCCCCGGCCACGG-CCCCAGGTGTTCCTATAGAGACAGTGGCGTCTCCCCAGTGGGTCCTGAGGAGGAGGAGGCGGGGTCCTCT-CAGGTGTCCCTGGAGGGATGGCG i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91756865 131 - 128169293 CCGAGGAAGACGAGGCTGGGTCCTCCCTGGGCACAGTCCCAAGGTGTCCCTGTAGGAACAGTGGCGTCTCCCAGGTAGGTCCTGAGGAGGAAGAGGCAGGGTCCTCTCCAGGTGTCCCTGTAGGGATGGCG i calJac3.chr8 C 0 I 132 s saiBol1.JH378119 26279714 131 + 36383700 CCGAGGAAGAGGAGGCTGGGTCCTCCCTGGGCACAGTCCCCAGGTGTCCCTGCAGGAACAGTGGCGTCTCCCAGGTAGGTGCTGAGGAGGAGGAGTCAGGGTCCTCTCCAGGCGTCCCTGTAGAGACAACG i saiBol1.JH378119 C 0 C 0 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I a score=244429.000000 s hg38.chr7_KI270899v1_alt 23559 244 + 190869 GCGCCTCTTGCGTAGGTCCTGAGG------------------------------------------------------------------------AGACGGCTCGGCTCCGCCCCCTGGAGCCGCAGGCCGTCTGTGCCGGAACCCGGGCGCCGCTTGAGGTTCTGTGAGGCGGCATCGCGCCCCCTGACGGCCGTCGCAGGCGGTGCAGGATGCTCAGGTGCTCGCGGTCGAGCTGTGGCCTCGCCCCTCCGGT---------GGATCTCCGAAGTTCACTGTTCTGACAATTACACGCCATGACTTTTGAAAAACCAGCTGA s panTro5.chrUn_NW_015975002v1 6040 244 + 14113 GCGTCTCCTGCGTAGGTCCTGAGG------------------------------------------------------------------------AGGCGGCTCGGCTCCGCCCCCTGGAGCCGCAGGGCGTCTGTGCCGGAACCCGGGCGCCTCTTGAGGTTCTGTGAGGCGGCATCGCGCCCCCTGACGGCCGTCGCAGGCGGTGCAGGATGCTCAGGTGCTCGCGGTCAAGCTGTGGCCTCGCCCCTCCGGT---------GAATCTCCGAAGTTCACTGTTCTGACAATTACACGCCATGACTTTTGAAAAACCAGCTGA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11075 244 - 30167 GCGCCTCCTGCGTAGGTCCTGAGG------------------------------------------------------------------------AGGCGGCTCGGCTCCGCCCCCTGGAGCCGCCGGGCTTCTGTGCCGGAACCCGGGCGCCTCTTGAGGTTCTGTGAGGCGGCATCGCGCCCCCTGACGGCCGTCGCAGGCGGTGCAGGATGCTCAGGTGCTCGCGGTTGAGCTGTGGCCTCGCCCCTCCGGT---------GGATCTCCGAAGTTCACTGTTCTGACAATTACACGCCATGACTTTTGAAAAACCAGCTGA i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 43906 244 + 85365473 GCGCCTCCTGGGTAGGTCCTGAGG------------------------------------------------------------------------AAGCGGCTCGGCTCCGCCCCCTGGAGGCGCAGGGCATCTGTGCCGGAACCCGGGCGCCTCTTGAGGTTCTGTGAGGCGGCGTCGCGCCCCCTGACGGCCGTCGCGGGAGGTGCAGGATGCTCAGGTGCTCGCGGTCGAGCTGTGGCCTCGCCCCTCCGGT---------GAGTCTCCGAAGTCCGCTGTTCTGACAATTACACGCCATGACTTTGGAAAAACCAGCTGA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91757128 240 - 128169293 GCGCCTCCTGGGTAGGTCCTGAGG------------------------------------------------------------------------AAGAGGCTCAGCTCCGCCCCCTGGAGACACACGGCGTCTGCGCGGGAACACGGGCGCCTCTCGATGCGT------------TCACACCCACTGCTGGCCATCGCACGTGGTGCGGAACGCTCAGGTGCTCGCAGTTGAGCTGTAGCAGTGTCCCTCCCACAGACCTTG-GAATCTCTGAAGTCCACGGTTCTGACAATTCCACGCCATGGGTTTTGAAAAATCAGCTGA i calJac3.chr8 I 132 C 0 s saiBol1.JH378119 26279845 311 + 36383700 GCGCCCGCTGGGTAGGTCCTGAGGAGGAGGAGGACTGAGGAGTCCTCTTCAGACGTCCTCGTAGCGACCGCAGCGCCTGCCGGTGGGGTCCTGAGTAGGAGGCTCGGCTCCGCCCCCTGGAG--ACACGGCGTCTGCGCGGGAACGCCGGCGCCTCTCGCCGCGT------------TCGCACCCCCTGCTGGCCGTCGCGGGCGGTGCGGAACGCTCCTGTGCTCGCGGTTGAGCTGTGGCAGCGTCGCTCCCGCAGACCCTGTGAATCCCAGAAGTCCACAGTTCTGACAATTCCACGCCATGGCTTTTGAAAAATCAGCTGA i saiBol1.JH378119 C 0 N 0 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I a score=952.000000 s hg38.chr7_KI270899v1_alt 23803 2 + 190869 gg s panTro5.chrUn_NW_015975002v1 6284 2 + 14113 gg i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11319 2 - 30167 gg i gorGor5.CYUI01004482v1 C 0 C 0 s nomLeu3.chr20 44150 2 + 85365473 gg i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91757368 2 - 128169293 AA i calJac3.chr8 C 0 I 108 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I a score=21552.000000 s hg38.chr7_KI270899v1_alt 23805 37 + 190869 ccgggcgcggtggctcacgcctgtaatcccagcactt s panTro5.chrUn_NW_015975002v1 6286 37 + 14113 ccgggcgcggtggctcacgcctgtaatcccagcactt i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01004482v1 11321 37 - 30167 ccgggcgcggtggctcacgcctgtaatcccagcactt i gorGor5.CYUI01004482v1 C 0 N 0 s nomLeu3.chr20 44152 37 + 85365473 ccgggcgcggtggctcacgcctgtaatcccagcactt i nomLeu3.chr20 C 0 C 0 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I e calJac3.chr8 91757370 108 - 128169293 I a score=21444.000000 s hg38.chr7_KI270899v1_alt 23842 97 + 190869 tgggaggccgaggcgggcggatcgcgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtct----ctacaaaaaacaaaaaaacaaaa s panTro5.chrUn_NW_015975002v1 6323 94 + 14113 tgggaggtcgaggcgggcggatcgcgaggtcagcagatcgagaccatcctggctaacacggtgaaaccccgtct----ctacaaaaaaaaaaaaaa---aa i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 44189 98 + 85365473 tgggaggctgaggcgggcggatcgcgaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctcccccccccaaaaaaaaataca---aa i nomLeu3.chr20 C 0 C 0 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I e calJac3.chr8 91757370 108 - 128169293 I a score=29881.000000 s hg38.chr7_KI270899v1_alt 23939 71 + 190869 aaaaattagccgggagtggtggcgggcgcctatagttccagctactcgggaggctaaggcaggagaatcgc s panTro5.chrUn_NW_015975002v1 6417 71 + 14113 aaaaattagccgggagtggtggcgggcccctatagttccagttactcgggaggctgaggcaggagaatcgc i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 44287 71 + 85365473 aaaaattagccgggcgtggtggcacgcgcctatagttccagctactcgggaggctgaggcaggagaatcgc i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91757478 71 - 128169293 TGGAATTggccaggcgcggtggctcacgcctataatcccagcacttcgggaggccgaggcaggtggatcac i calJac3.chr8 I 108 I 6337 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I a score=8165.000000 s hg38.chr7_KI270899v1_alt 24010 31 + 190869 ttgaacccgggagggggaggtttcagggagc s panTro5.chrUn_NW_015975002v1 6488 31 + 14113 ttgaacccgggagggggaggtttcagggagc i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 44358 31 + 85365473 ttgaacccgggagggggaggttgcagtgagc i nomLeu3.chr20 C 0 I 6717 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I e calJac3.chr8 91757549 6337 - 128169293 I a score=1513.000000 s hg38.chr7_KI270899v1_alt 24041 5 + 190869 cTCCT s panTro5.chrUn_NW_015975002v1 6519 5 + 14113 cTCCT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 51106 5 + 85365473 CTGCC i nomLeu3.chr20 I 6717 C 0 s calJac3.chr8 91763886 5 - 128169293 CTGCC i calJac3.chr8 I 6337 C 0 e cebCap1.NW_016107703v1 370370 5187 - 2125214 I a score=6550.000000 s hg38.chr7_KI270899v1_alt 24046 7 + 190869 CTAAACA s panTro5.chrUn_NW_015975002v1 6524 7 + 14113 CTAAACA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 51111 7 + 85365473 CTAAACA i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91763891 7 - 128169293 CTAAACA i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 375557 7 - 2125214 CTAAACA i cebCap1.NW_016107703v1 I 5187 C 0 a score=4500.000000 s hg38.chr7_KI270899v1_alt 24053 1 + 190869 G s panTro5.chrUn_NW_015975002v1 6531 1 + 14113 G i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 51118 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33893983 1 + 185818997 G i rheMac8.chr3 N 0 C 0 s macFas5.chr3 33509911 1 + 192294377 G i macFas5.chr3 N 0 C 0 s macNem1.NW_012019910v1 4271689 1 - 9440265 G i macNem1.NW_012019910v1 N 0 C 0 s cerAty1.NW_012002954v1 16860632 1 - 21915920 G i cerAty1.NW_012002954v1 N 0 C 0 s manLeu1.NW_012101810v1 17400 1 - 2515279 G i manLeu1.NW_012101810v1 N 0 C 0 s calJac3.chr8 91763898 1 - 128169293 G i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 375564 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 a score=245600.000000 s hg38.chr7_KI270899v1_alt 24054 55 + 190869 AAAAGACCGACCCCTAGTCAGTGTTTTATTTTCCCTGATGACCGCAGGCCATGAA s panTro5.chrUn_NW_015975002v1 6532 55 + 14113 AAAAGACCGACCCCCAGTCAGTGTTTTATTTTCCCTGATGACCGCAGGCCATGAA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 51119 55 + 85365473 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGATGACCGCAGGCCATGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33893984 55 + 185818997 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGACGACCGCAGGGCGTGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33509912 55 + 192294377 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGACGACCGCAGGGCGTGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4271690 55 - 9440265 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGACGACTGCAGGGCGTGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16860633 55 - 21915920 AAAAGACTGACCCCCAGTCAGTGTTTTATTTTCCCTGACGACCGCAGGGCATGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 956 55 - 21531802 AAAAGACTGACCACCAGTCAATGTTTTATTTTCCCTGATGACTGCAGGGCGTGAA i chlSab2.chr28 N 0 C 0 s manLeu1.NW_012101810v1 17401 55 - 2515279 AAAAGACTGACCCCCAGTCAGTGTTTCATTTTCCCTGATGACCGCAGGGCGTGAA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr8 91763899 55 - 128169293 AAAACACTGACCCCCAGACAATGTTTTATTTTCCTTGATGACCGCAGGCCATAAA i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 375565 55 - 2125214 GAAAGACTGACCCCCAGTCAATGTTTCAGTTGCCTTGATGACTGCAAGCCATGAA i cebCap1.NW_016107703v1 C 0 C 0 a score=4385003.000000 s hg38.chr7_KI270899v1_alt 24109 1010 + 190869 CTTATGGAACAATAACGTAATTAGGCTCTTGGACCCAGGGAAGTAGCTCC-ATGCCACCTGCCCTCATTTGCTGAGCATTTTGGTTTCTCGGATCTGCTACTCA---GTTTCCAGTCTCCTCCTCCCTGCCAATGCTGCCAGCGTGCCTCTTCTGCAAGCAGCAACCGCCTTCCACCTTCCATTCTCTACTCTTTAGCCATCATCTGGCTGGACTTTTCAGAATGGACTGCAAAGGAGAATAAACTG------GCTGA-GTCTGAGGG-TGCACTCACGTGCAAAGTTGCAAGCTTTAATGTACCCATCTTGGCAGATTTTGGCTCCTTAGAGTTCTTTCTCATTTGGGGATCTCATGTGCCCTCTGATGAGGTGGGCTCACTGACTGTCTGCGCTGGTGGCATCTGGCAGCACCTTGTCACGTGCACCTAGGTAAGAACC-TGGCTGCACCTGATGC---TTAGCCAAA--------------CGGGGAACCCACAGTTCTGTGTATCAGGTGATGTTTAATCTCTGGAGGTTAATGAACATGAGGGAGCGATACTGTCTGGGACTCTCCACATATTGCGTCTGAGTCACTGAAGGAAAAGAATGTGGGGTCTGTTTGCTGGGACTGGACACCTCCATAATCACATGCTCCATGAAATGCAGGCAGGAGATCTCGCTTTCTACCTCTGGGATGGGAGTGTGCAGTTTCAGAATGAGACTAGCCCACACAACTGACT----ATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTC-----TGGTTTTT----AGAAATGTGAATGTTATTTACACTAGGTTAAAAAACC-TGAAT-ATCCAACAGCATGACACCGACTAA-----AGAAATACTGGCGCACTCTGGAA-CCTTGCACACCACTTATTGGCATGGGAACAATGGGAACACGCCTATGCAAAGATGTGCATGGAAATTAG-AAGAATGCAACACTGTAGAACAGATGTGACTAGGTGCATGATCAAGAGCACACAAGACCA s panTro5.chrUn_NW_015975002v1 6587 1014 + 14113 CTTATGGAACAATAACGTAATTAGGCTCTTGGACCCAGGGAAGTAGCTCC-ATGCCACCTGCCCTCATTTGCTGAGCATTTTGGTTTCTCGGATCTGCTACTCA---GTTTCCAGTCTCTTCCTCCCTGCCAATGCTGCCAGCGTGCCTCTTCTGCAAGCAGCAACCGCCTTCCACCTTCCATTCTCTACTCTTTAGCCATCATCTGGCTGGACTTTTCAGAACGGACTGCAAAGGAGAATAAACTG------GCTGA-GTCTGAGGG-TGCACTCACGTGCAAAGTTGCAAGCTTTAATGTACCCATCTTGGCAGATTTTGGCTCCTTAGAGTTCTTTCTCATTTGGGGATCTCATGTGCCCTCTCATGAGGTGGGCTCGCTGACTGTCTGCGCTGGTGGCATCTGGCAGCACCTTGCCACGTGCACCTAGGTAAGAACC-TGGCTGCACCTGATGC---TTAGCCAAA--------------TGGGGAGCCCACAGTTCTGTGTATCAGGTGATGTTTAATCTCTGGAGGTTAATGAACGTGAGGGAGCGATACTGTCTGGGACTGTCCACATATTGCGTCTGAGTCACTGAAGGAAAAGAATGTGGGGTCTGTTTGCTGGGACTGGACACCTCCATAATCACATGCTCCGTGAAATGCAGGCAGGAGATCTCGCTTTCTACCTCTGGGATGGGAGTGTGCAGTTTCAGAATGAGACTAGCCCACACAACTGACTCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTC-----TGGTTTTT----AGAAATGTGAATGTTATTTACACTAGGTTAAAAAACC-TGAAT-ATCCAACAGCATGACACCGACTAA-----AGAAATACTGGCGCACTCTGGAA-CCTTGCACACCACTTATTGGCATGGGAACAATGGGAACACGCCTATACAAAGATGTGCATGGAAATTAG-AAGAATGCAACACTGTAGAACAGATGTGACTAGGTGCATGATCAAGAGCACACAAGACCA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 51174 998 + 85365473 CTTATGGAACAATAAGGTAATTAGGCTCTTGGACCCAGGGAAGTAGCTCC-ATGCCACCTGCCTTCATTTGCTGAGCATTTTGGTTTCTCGGATATGCTACTCA---GTTTCCAGTCTCTTCCTCCCTGCCAATGCCGCCAGCGTGCCTCTTCTGCAAGCAGCAACCGCCTTCCACCTTCCATTCTCTACTCTTTAGCCATCATCTGGCTGGACTTTTCAGAATGGACTGCAAAGGAGAATAAACTG------GTTGG-GTCTGAGGG-TGCACTCACGTGCAAAGTTGCAAGCTTTATTCTATCCATCTTGGCAGATTTTGGCTCCTTAGAGTTCTTTCTCATTTGGGGATCTCATGTGCCCTCTGATGAGGTGGGCTCACTGACTGTCTGCACTGGTGGCATCTGGCAGCACCTTGTCACATGCACATAGGTAAGAACC-TGGCTGCACCTGATGC---TTAGCCAAA--------------GGCGGAGCCCGCAGTTCTGTGTATCAGGTGATGTTTAATCTCTGGAGGTTAATGAACATGAGGGAGCAATACTGTCTGGGACTGTCCACATATTGCGTCTGAGTCACTGAAGGAAAAGAATGCAGGGTCTGTTTGCTGGAACTGGACACCTCCATAATCACATGCCCCATGAAAGGCAGGC---ACATCTCGCTTTCTACCTCTGGGATGGGAGTGTGCAGTTTCAGAATGAGACTAGCCCACACAACTGACT----ATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTC-----TGGTTTTT----AGAAATGTGAATGTTATTTATACTAGGTTAAAAAGCC-TGAAT-ATCCAACAGCATGACACCGACTAA-----AGAAATACTGGCGCACTCTGGAA-ACTTGCAGACCACTTATTGGC---------ATGGGAACACGTCTATGCAAAGATGTGCATGGAAATTAG-AAGAATGCAACACTGTAGAACAGATGTGACTAGGTGCATGATCAAGAGCACACAAGACCA i nomLeu3.chr20 C 0 I 104 s rheMac8.chr3 33894039 969 + 185818997 CTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCC-ATAGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCA---GTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTGGTCTTTAGCCACGATCTGCCTGGACTTTTCAGAATGGACTGCAAAGGAGAATAAACTG------GCTGA-GTCTGAGGG-TG-ACTCATGTGCAAAGCTGCAAGCTTTGCTGTACCCGTCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTGTCTGCACTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCGTGGCTGCACCTGACGC---TTAGCCAAA--------------CGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCAGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATACTGCGTCTGAGTCAGTGAAAGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTCGCTTTCTACCTCTGGGACATG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTC-----TGTTTTTC----AGAAATGTGAATGTTATTTATACTAGGTTAAAAAACC-CGAAT-ATCCAACAGCATGACACCGACTAA-----AGAAA--------CACTCTGGAA-CCTTGCAGACCACTCATTGGCACGGGAACAATGGGAACGTGCCTATGCAAAGATGTGTGTGGAAATTAG-AAGAATGCAACACTGTAGGACGGACGTGACT-------------AAAACACACAGGACCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33509967 969 + 192294377 CTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCC-ATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCA---GTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACGATCTGCCTGGACTTTTCGGAATGGACTGCAAAGGCGAATAAACTG------GCTGA-GTCTGAGGG-TG-ACTCATGTGCAAAGCTGCAAGCTTTGCTGTACCCGTCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTGTCTGCACTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCGTGGCTGCACCTGACGC---TTAGCCAAA--------------CAGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCAGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATATTGCGTCTGAGTCAGTGAAAGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTCGCTTTCTACCTCTGGGACATG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTC-----TGTTTTTC----AGAAATGTGAATGTTATTTATACTAGGTTAAAAAACC-CGAAT-ATCCAACAGCATGACACCGACTAA-----AGAAA--------CACTCTGGAA-CCTTGCAGACCACTCATTGGCATGGGAACAATGGGAACGTGCCTATGCAAAGATGTGCGTGGAAATTAG-AAGAATGCAACACTGTAGGACGGACGTGACT-------------AAAACACACAGGACCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4271745 969 - 9440265 CTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCC-ATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCA---GTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACGATCTACCTGGACTTTTCGGAATGGACTGCAAAGGAGAATAAACTG------GCTGA-GTCTGAGGG-TG-ACTCATGTGCAAAGCTGCAAGCTTTGCTGTACCCGTCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTGTCTGCACTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCATGGCTGCACCTGACGC---TTAGCCAAA--------------CGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCAGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATACTGCGTCTGAGTCAGTGAAAGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTCGCTTTCTACCTCTGGGACATG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTC-----TGTTTTTC----AGAAATGTGAATGTTATTTATACTAGGTTAAAAAACC-CGAAT-ATCCAACAGCATGACACCGACTAA-----AGAAA--------CACTCTGGAA-CCTTGCAGACCACTCATTGGCACGGGAACAATGGGAACGTGCCTATGCAAAGATGTGCGTGGAAATTAG-AAGAATGCAACACTGTAGGACGGACGTGACT-------------AAAACACACAGGACCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16860688 969 - 21915920 CTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCC-ATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCA---GTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACAATCTGCCTGGACTTTTCGGAATGGACTACAAAGGAGAATAAACTG------GCTGA-GTCTGAGGG-TG-ACTCACGTGCAAAGCTGCAAGCTTTGCTGTACCCATCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTATCTGCGCTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCGTGGCTGCACCTGACGC---TTAGCCAAA--------------CGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCGGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATATTGCATCTGAGTCAGTGAAGGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTTGCTTTCTACCTCTGGGACGTG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTC-----TGTTTTTC----AGAAATGTGAATGTTATTTATACTATGTTAAAAAACC-CGAAT-ATCCAACAGCATGACACCGACTAA-----AGAAA--------CACTCTGGAA-CCTTGCAGACCACTCATTGGCACGGGAACAATGGGAACATGCCTATGCAAAGATGTGCGTGGAAATTAG-AAGAATGCAACACTATAGGACGGACGTGACT-------------AAAACACACAGGACTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 1011 969 - 21531802 CTTATGGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTATCTCC-ATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGACCTGCTGCTCA---GTTTCCACTCTCTTCCTCCCTGCCAATGCCACCAGCGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACAATCTGCCTGGACTTTTCAGAACGGACTGCAAAGGAGAATAAACTA------GCTGA-GTCTGAGGG-TG-ACTCACGTGCAAAGCTGCAAGCTTTGCTGTACCCGTCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGATGAGGTCGGCTCGCTGTCTGTCAGTGCTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGTTAAGCACCGTGGCTGCACCTGATGC---TTAGCCAAA--------------TGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCGGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATATTGCGTCTGAGTCAGTGAAGGAAATGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTCGCTTTCTACCTCTGGGATGTG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATATCTTAATCACAAACACTCTTC-----TGTTTTTC----AGAAATGTGAATGTTATTTATACTAGGTTAAAAAACC-CGAAT-ATCCAACAGCATGACACCGACTAA-----AGAAA--------CACTCTGGAA-CCTTGCAGACCACTCATTGGCATGGGAACAATGGGAACGTGCCTATGCAAAGATGTGTGTAGAAATTAG-AAGAATGCAACACTGTAGGACAGATGTGACT-------------AGACCACAAAGGACCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 17456 969 - 2515279 CTTACTGAACAAAAAGGTAATTAGGCTCTTGGACCCAGGCAAGTAGCTCC-ATGGCACCTGCCCTCATTTGTTGAGCATTTTGGTTTCTCAGATCTGCTGCTCA---GTTTCCAGTCTCTTCCTCCCTGCCAATGCCACCAACGTGCCTCTCCTTCCAGCACCAACTGCCTTCCACCTTCCATTCTCTAGTCTTTAGCCACGATCTGCCTGGACTTTTCGGAATGGACTGCAAAGGAGAATAAACTG------GCTGA-GTCTGAGGG-TG-ACTCACGTGCAAAGCTGCAAGCTTTGCTGTACCCATCTTGGCAGCTTTGGGCTCCATAGAGTTCCTTCTCATTTGGGGA------------TCTGACGAGGTGGGCTCGCTGCCTGTCTGCGCTGGTGGCATCTGGTAGCACCTTGTCACGTGCACATAGGTAAGCACCGTGGCTGCACCTGACGC---TTAGCCAAA--------------CGGGGAGCCTGCATTTCTGTGTGTCAGGTGATACGTAACCTCCAGAGGTTAATGAACGTGAGGGAAAGATAATATCTGGGCCTGTCCACATATTGCGTCTGAGTCAGTGAAGGAAAAGAATGTGGGGTCTGTTTGCTGAGACTGGACACCTCCATAATCTCATGCTCCATGAAAGGCAGGCAGGAGGTCTTGCTTTCTACCTCTGGGACGTG------------CAGAATAAGACTAGCCCACACAACTGACCCTTTATTTGGGAAAGAGAAATGAAATCAGATGCAGCAATTTAATATTCACTAAGATGATATCTTAATCACAAACACTCTTC-----TGTTTTTC----AGAAATGTGAATGTTATTTATACTAGGTTAAAAAACC-CAAAT-ATCCAACAGCATGACACCGACTAA-----AGAAA--------CACTCTGGAA-CCTTGCAGACCACTCATTGGCACGGGAACAATGGGAACGTGACTATGCAAAGATGTGCGTGGAAATTAG-AAGAATGCAACACTGTAGGACAGATGTGACT-------------AAAACACACAGGACCG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr8 91763954 989 - 128169293 CTCATGGAACAATAAAGTTATTAGGCTCTTGGACCTAAGGAAGTAGCTCC-ATGGCACCTGTCCTCCTTTGCTGGACATTTTGGTTTCTCAGATGTGCCACTCA---GTTTCCAGCCTCTTCCTCCCTGACAATGCTGCCAGCATGCCTCTCCAGCAAGCAGCAGTGGCCTTGCATATTCCATTCTCTACTCTTTAGCCATCATATGGCTGGACTTTTCATAACAGACTGCAAAGGAGAATAACCTG------GGTGA-GTGTGAGGA-TGCACTCACATGCAAAGTTACAAGCTTTACTGTACCCAACTTGGCAGATTTTGGCTCCTCAGAGTTCCTTCTCATTTGGGGATCTGATTCGCCCTCTGATAAGGTGGACTCGCTGACCATCTGGGATGGTAGCATCTGGAAGCACCTTGTCATGTGCACATAGGTAAGGATC----CTGCACCTGACAC---TTGACCAAA--------------TGGGGAGCCTGCAGTTCTATGTATCAGGTGATATTTAATCTCTAGATGTTAATGAATGTGAGGGAGAGATACCACCTGGGCCTGGCCACATATTGCATCTAAGTCACTGAGGGAAAAGAATATGGGGTCTCTTTGCTGGGACTGGACACCTCCATAATTACATGCT-CATGAAAGGCAGCCGGGAGGTCTCATTTTCTACCTCTGGGATGTGAGTGTGTTGTTTCAGAATGAGAATAGCCCACACAACTGACCCTTTATTTGTCAAACAGGAATGAAATCAGATGCAGCAATTTAATATCCACTAAGATGATGTCTTAATCAC--ATACTCTTC-----CATTTTTT----AGAAATGTTAATGTTATTTATACTAGGTTAAAAAAACTTGAAT-ATCCAACAGCATGGCACTGACTGA-----AGAAATACTGGCACACACTGGAATTCTTGCAGACCACTTACTGGG---------ATGGGAACATGCCTATGCAAAG-TGTGCATGGAAATTAG-AAGAATGCAACTTCGTGGAACAGACGAGACTAGGTGCATCATGAAGAAC----------- i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 375620 989 - 2125214 CTCGTGGAACAATAAAGTAATCAGGCTCTTGGACCCAGGGAAGTAGCTCC-ATGCTACCCACCCTTATTTGCTGGGCATTTTGGTTTCTCAGATCTGCTGCTCT---GTTTCCATCCTCTTCCTCCCTGCCAATGCTGCCAACATGCCTCTCCTGCAAGCAGCAACTGCCTTCCATCTTCCATTCTCTACTCTTCAGCCATCATCTGGCTGGACTTTTCAGAACAGACTGCAAAGGAGAATAACCTG------GCTGA-GT------C-TGCACTCACATGCAAAGTTGCAAGCTTTACTGTACCCATCTTGGCAGATGTTGGCTCCTAGGAGGGCTTTCTCATTTGGGGATCTGATGTGCCCTCTGATGAGGTGGGCTTGCTGACTGTCTGGGCTGGTGGCATCTAGCAGCACCTCGTCACTTGCACATAGGTAAGCACCATGGCTGCACTCGATGC---TTTGCCAGA--------------TGGGGACCCCACAGTTCTATGTATCAGGTGATCTTTAATCTCTGGAGGTTTAAGAATGTGAGGGAGGGATACTATCTGGG-CTGGCCACATACTGCATCTGAGTCAGTGAGGGAAAAGAATGCGGGGCCTGTTTGCTGGGACTGGAAACCTCCATAATCACATGCTCCGTGAAAGGCAGGCAGGAGGTCTCATTTTCTATCTCTGGAATGTGAGTGTGCAGTTTCAGAATGAGAATAGTCCACACAACTTACTCTTTCTTTGGAAAAGATAAACAAAATCAGATGCAGCAATTTGATATCCACTAAGATAGCATCTTAATCACAAACACTCTTC-----TGTTCTTA----AGCAATGTTCATGTTATCTATACTAGGTTAAAAAATC-TGAAT-ATCCAACAGCATGGCACTGACTGA-----AGAAATACTGGTGCACTCTGGAACCCTTGCAGACCACTAATTGGC---------ATGGGAACATGCCTATGCAAAGATGTGTATGGAAATTAA-AAGAATACAACATAGTGGAACAGATGTGACGAGGTGCATGATCAACAGC----------- i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60953456 924 - 77573801 CCCATTGAACAGTAAAGCAGTAAGTTTGT------CAAAGAAGCAGCCCTGACACCATCTTCCC-CATCTACTG-GCCTTTTGATTTTTTGGACCTGCTGCTCACAGTTTCCCCATCTCTTGCT-CATGTCACCACTGCAAGCATGCCACTCCTGCAAA-AGTAACCACCTCCTACCTTCCATGGTCTATGCTCCAGCCATCCTGTGGCTTAACTTTTTAGAACAGAGCACAGAAGAGAACAAGCAGCCATGAGCTAATGCCCGAGGGCTGCACCTGTGTGCAAAGATATGC-CATCATTGCGACTGTCTGGATGTGGTGTGGCTACTTAG--------------------------------------------GGCCTCCTGGATGTCTGTGTTATCCACG-CACATGTCACATGGTCAGATGTGCATATATGAGCACC-TGGCTATGCCTAACTCTTGTTAGCCAAAATAATATTTGATCTTACAGAGGCTATAGCCCTATATATCAGATGACATTCAATCTCCTGACATTGATGCCCATGAGGAACAGTTGTTCTCTGGCCCAGCCCATATCTTGTGTCTGACTCAGAGAAGGAAAAGAATGCAGGGTATGTTTGCTGGGGCCAGTCACCTCCATAATTGCATGCTCCCTGAAAGGCAGGCAGGAATTCT--CCTTCCACCTCTGGAATATGAGTATGAGCTTCCTGAAGGAAAGCAGTCCATACAACTTACCCTTTATTTGGAAAAGGCATATGAATTCAGGTAAAACAATTGGATATCTGGTAAGATGGTACCTTATTC-CAAATACTACTCAGGAGTGTTTTTTTTAAAGGAATGTTAATATTATTGTTAATAGCTTAAAAAA---GGAATAATCCAACAGCATGGCACTGATTAAATAACAGAAT--------AACCTGGGAA-CTTTGCAAACCAAT--TTTGT---------ATAAGAATGTACTTGTG--ATGGTACTTATTGAAGTCAATATGAATA----------------------------------------------------- i canFam3.chr6 N 0 C 0 a score=47204.000000 s hg38.chr7_KI270899v1_alt 25119 15 + 190869 AGCCTGCCTCTGCAC s panTro5.chrUn_NW_015975002v1 7601 15 + 14113 AGCCTGCCTCTGCAC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 52276 15 + 85365473 CGCCTGCCTCTGCAC i nomLeu3.chr20 I 104 C 0 s rheMac8.chr3 33895008 15 + 185818997 CGTCTGCCTCTGCAC i rheMac8.chr3 C 0 I 69 s macFas5.chr3 33510936 15 + 192294377 CGTCTGCCTCTGCAC i macFas5.chr3 C 0 I 33 s macNem1.NW_012019910v1 4272714 15 - 9440265 CGTCTGCCTCTGCAC i macNem1.NW_012019910v1 C 0 I 69 s cerAty1.NW_012002954v1 16861657 15 - 21915920 CGTCTGCCTCTGCAC i cerAty1.NW_012002954v1 C 0 I 69 s chlSab2.chr28 1980 15 - 21531802 CGTCTGCCGCTGCAC i chlSab2.chr28 C 0 I 33 s manLeu1.NW_012101810v1 18425 15 - 2515279 CGTCTGCCTCTGCAC i manLeu1.NW_012101810v1 C 0 I 33 s canFam3.chr6 60954380 5 - 77573801 ----------TGCAC i canFam3.chr6 C 0 C 0 e cebCap1.NW_016107703v1 376609 0 - 2125214 C e calJac3.chr8 91764943 0 - 128169293 C a score=52897.000000 s hg38.chr7_KI270899v1_alt 25134 37 + 190869 ACACAAGACAGCGCCTGAGTCTGCACCACGTGACGGG s panTro5.chrUn_NW_015975002v1 7616 37 + 14113 ACACAAGACCGCGCCTGAGTCTGCACCACGTGACGGG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 52291 37 + 85365473 ACACAAGACCGCACCTGCCTCTGCACCACGTGACGGG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33510984 36 + 192294377 ACACAAGACTCTGTCTGCCTCTACTCCCCGTGATGG- i macFas5.chr3 I 33 C 0 s chlSab2.chr28 2028 36 - 21531802 ACACAAGACTGCGTCTGCCTCTACACCCCGTGACGG- i chlSab2.chr28 I 33 C 0 s manLeu1.NW_012101810v1 18473 36 - 2515279 ACACAAGACTCTGTCTGCCTCTACACCCCGTGATGG- i manLeu1.NW_012101810v1 I 33 C 0 s calJac3.chr8 91764943 37 - 128169293 ACAGAAGACTGCATCTGCCTCTGCACAATGTGACGAG i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107703v1 376609 36 - 2125214 -CACAAGACTGCTCCTGCCTCTGCTCCACATGACAAG i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60954385 14 - 77573801 ACAGAAGAC------------------ATGTG----- i canFam3.chr6 C 0 C 0 e cerAty1.NW_012002954v1 16861672 69 - 21915920 I e macNem1.NW_012019910v1 4272729 69 - 9440265 I e rheMac8.chr3 33895023 69 + 185818997 I a score=425709.000000 s hg38.chr7_KI270899v1_alt 25171 108 + 190869 ACCACTGTGGAGCAAGCCTGG--------GAG---------ATTCTGATGT-AGGCAGCAGAGGCGTCACTTAGGGACCAGACTTCCGTGGG-AAACCACCATCTCCTTCCAACCCAGATGCGCTTC s panTro5.chrUn_NW_015975002v1 7653 108 + 14113 ACCATTGTGGAGCAAGCCTGG--------GAG---------ATTCTGATGT-AGGCAGCAGAGGCGTCACTTAGGGACCAGACTTCCGTGGG-AAACCACCATCTCCTTCCAACCCAGATGCACTTC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 52328 79 + 85365473 ACCATTGAGGAGCAAGTCTGG--------GGG---------------------------------------TAGGGACCAGGCTTCCGTGGG-AAACCACCATCTCCTTCCCACCTAGATGCACTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33895092 107 + 185818997 ACTGTTGTGGAACAAGCCCAG--------GGG---------ATTCTGGTGA-GGGCAGCAGTGGCGTCACTTAGGGACCAGGCTCCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i rheMac8.chr3 I 69 C 0 s macFas5.chr3 33511020 107 + 192294377 ACCATTGTGGAACAAGCCCAG--------GGG---------ATTCTGGCGA-GGGCAGCAGTGGCGTCACTTAGGGACCAGGCTCCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4272798 107 - 9440265 ACCGTTGCGGAACAAGCCCAG--------GGG---------ATTCTGGTGA-GGGCAGCAGTGGCGTCACTTAGGGACCAGGCTCCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i macNem1.NW_012019910v1 I 69 C 0 s cerAty1.NW_012002954v1 16861741 107 - 21915920 ACCATTGTGGAACAAGCCCAG--------GGG---------ATTCTGGTGA-GGGCAGCAGTGGCGTCACTTAGGGACCAGGCTTCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i cerAty1.NW_012002954v1 I 69 C 0 s chlSab2.chr28 2064 107 - 21531802 ACCGTTGTGGAACAAGCCCGG--------GGG---------ATTCTGGTGA-GGGCAGCAGTGGCGTCACTTAGGGACTAGGCTTCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATACACTTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 18509 107 - 2515279 ACCGTTGTGGAATAAGCCCAG--------GGG---------ATTCTGGTGA-GGGCAGCAGTGGCGTCACTTAGGAACCAGGCTTCCGTGGG-AATCC-CCATCTCCTTCCAACCTAGATGCACTTC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr8 91764980 117 - 128169293 AACATTGTGGAGCAAGCCTGT--------GGGCTGGTTCAGATTCTGATGT-AGGCAGCAGTGGCGTCATTTAGGGACCAGGCTTCCATGGGTAACCC-CCATCTCCTCCCAACCCAGGTGCAATTC i calJac3.chr8 C 0 N 0 s cebCap1.NW_016107703v1 376645 117 - 2125214 ACCATTGTGGAGCAAGCCTGG--------GGGATGGCTCAGATTCTGATGT-AGGCAGCCGTGATGTCACTTAGGGACCAGGTTTCCACAGGTAAGCC-CCACCTCCTCCAAACCTAGATGTGCTTC i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60954399 116 - 77573801 ACAATTGTGGAGCAAGTCCAGCCTGGCTCAGG---------GTTCTGATGATAGGCAGCAATCATTTCAAAGAAGG-CCAAGTTTCTAGGGGTCACTC-CCATCTCTCCCAAACCTACACATTTTCC i canFam3.chr6 C 0 C 0 a score=2854478.000000 s hg38.chr7_KI270899v1_alt 25279 731 + 190869 -ATGGCAAACGCGAGCAGATGAAGGTCATGTAGGAGACGAAAGAACTCGCT------CCCCAAGCCCA-TAGGCCTTTGTCCTCCACCCATGGACCGAAGCATCTTGTTAGATGAGGGCCGCCCGCAGCCAGGGCCGGCGG-AGAACCTGCCACGGAGCAGGTG-TCCGTAAAGAACTGCTG----ACTGTCACTGTCCCTACTTGGGGGCCAC-TGGGGGATCTGATGCATCTCACTACCCTTTGTAAAGGAATTATTGAAAATGTCAGCCCTCTAACAAGGCATAGGTTGATTAGTTACAGGATTTAACATTTCTATTTTAAAAGGCAGCATTGAAGAATGTCTTTACAAAGGCTGTACAAAACCTGCCATATTCTTTGTCACACAGATTGACTCATGTGCAATGCAGCCATTTGATGAAAC--ACTGGCATTTACCAGATGTAAACTTATTAGCAGACGACAACTAGA----AATAGTGTGCTGGATGTGCCCGTTTATTTAT----------ATGAATATAACCATCTCTCTAGATGCATCGAAAGATACACAACATGAGAT-CCACTTTATTTCTACAAGTTTATGATCAGGTGGTCAGGACAGGGAAAGAAGAGGAAAAAACTTTAAATCATGGACCTTTATTCTTAGACACCTTTATCCTACATACACAAGGGACATGCATGGTTGAAATAACGGAAACAAG-TGGATAAAAGTGAAAGTAACTTAAACAGCTTTACCCAGGAATGCCCAATTCAGG s panTro5.chrUn_NW_015975002v1 7761 732 + 14113 -GTGGGAAACGCGAGCAGATGAAGGTCATGTAGGAGACGAAAGAACTCGCT------CCCCAAGCCCA-TAGGCCTTTGTCCTCCACCCATGGACCGAAGCATCTTGTTAGATGACGGCCGCCCGCAGCCAGGGCCGGCGG-AGAACCTGCCATGGAGCAGAGG-TCCGTAAAGAACTGCTG----ACTGTCACTGTCCCTACTTGGGGGCCAC-TGGGGGATCTGATGCATCTCACTACCCTTTGTAAAGGAATTATTGAAAATGTCAGCCCTCTAACAAGGCATAGGTTGATTAGTTACAGGATTTAACATTTCTATTTTAAAAGGCAGCATTGAAGAATGTCTTTACAAAGGCTGTACAAAACCTGCCATATTCTTTGTCACACAGATTGACTCATGTGCAATGCAGCCATTTAATGAAAC--ACTGGCATTTACCAGATGTAAACTTATTAGCAGACGACAACTAGA----AATAATGTGCTGGATGTGCCCGTTTATTTAT----------ATGAATATAACCATCTCTCTAGATGCATCGAAAGATACACAACATGAGAT-CCACTTTATTTCTACAAGTTTATGATCAGGTGGTCAGGACAGGGAAAGAAGAGGAAAAAACTTTAAATCATGGACCTTTATTCTTAGACACCTTTATCCTACATACACAAGGGACATGCATGGTTGAAATAATGGAAACAAGGTGGATAAAAGTGAAAGTAACTTAAACTGCTTTACCCAGGAATGCCCAATTCAGG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 52407 730 + 85365473 -ATGGGAAAGGAGAGCAGATGAAGGTCACGTAGGAGACGGAAGACCGTGCT------CCCCAAGCCCA-CAGGCCTTTGTCCTCCACCCATAGACCGAAGCATCTTGTTAGATGAGGGCCACCCGCAGCCAGGGCTGGAGG-AGGACCTGCCACAGAGCAGGTG-TCCGTAAAGAGCTGCTG----ACCGTCACTGTCCCTACCTGGGGGCCAC-TGGGGGATCTGACGCATCTCACTGCCCTTTGTAAAGGAGTTATTGAAGACATCAGCCCTCTAACAAGGCATAGGTTGGTTAGTTACAGGATTTAACATTTCTATTTTAAAAGGCAGCATTGAACAGTGTCTTTACAAAGGATGTATAAAATCTGCCATATCCTTTGTCACACAGATTGACTCATGTGCAATGCAGCCATTT-ATGAAAC--ACTGGCATTTACCAGATGTAAACTTATTAGCAGATGGCAACTACA----GATAATGTGCTGGATGTGCACATTTATTTAT----------ATGAATATAACCATCTCTCTAGATGCATCAAAAGATGCACAACATGAGAT-GCAATTTATTTCTACAAGTTCATGGTTAGGTGGTCAGGACAGGGAAAGAAGAGGAAAAAACTTTAAATCATGGTGCTTTATTCTTAGACACCTTTACCCTGTATACACAAGGGACATGCATGGTTGAAATAACGGAAACAAGGTGGATAAAAG-GAAAGTAACTTAAACTGATTTACCCAGGGATGCCCAGTTCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33895199 729 + 185818997 -ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACT------CCCCAAGCCCG-TAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCCACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTG-TAAGTAAAGAACCACTG----ACTGTCACCGTCCCTACTTGGGGGCCGC-TGAGAGATCTGACACGTCTCACTGCCCTTCGTAAAGTAATTATTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAGGATGTACAAAACCTGTCACA--CTCTGCCACACAGATGGACTTATGTGCAATGTAGCCATTTAATGAAAC--ACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAGA----AATGATGTGCTGGATGCGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGAAATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33511127 729 + 192294377 -ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACT------CCCCAAGCCCG-TAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCCACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTG-TCAGTAAAGAACCGCTG----ACTGTCACCGTCCCTACTTGGGGGCCGC-TGAGAGATCTGACACGTCTCACTGCCCTTCGTAAAGTAATTATTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAGGATGTACAAAACCTGTCACA--CTCTGCCACACAGATGGACTCATGTGCAATGTAGCCATTTAATGAAAC--ACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAGA----AATGATGTGCTGGATGTGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGAAATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4272905 728 - 9440265 -ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACT------CCCCAAGCCCG-TAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCCACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTG-TCAGTAAAGAACCGCTG----ACTGTCACCGTCCCTACTTGGGGGCCGC-TGAGAGATCTGACACGTCTCACTGCCCTTCGTAAAGTAATTATTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAGGATGTACAAAACCTGTCACA--CTCTGCCACACAGATGGACTCATGTGCAATGTAGCCATTTAATGAAAC--ACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAG-----AATGATGTGCTGGATGCGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGAAATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16861848 729 - 21915920 -ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACT------CCCCAAGCCCG-TAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCTACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTG-TCAGTAAAGAACCGCTG----ACTGTCACCGTCCCTACTTGGGGGCCGC-TGGGAGATCTGACGCGTCTCACTGCCCTTCGTAAAGTAATTGTTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAGGATGTACAAAACCTGTCACA--CTCTGCCCCACAGATGGACTCATGTGCAACGTAGCCATTTAATGAAAC--ACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAGA----AATGATGTGCTGGATGCGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGACATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 2171 729 - 21531802 -ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCTCT------CCCCAAGCCCG-TAGGCCTTTGTCCTCCACCCATGGACAGAAGTATCTTGTTAGATGAGGGCTGCCCACAACCAGGGCTGCAGG-AGAACCTGCCACGGAGTGAGTG-TCAGTAAAGAACCGCTG----GCTGTCACCATCCCTACTTGGGGGCCAC-TGGGAGATCTGACGTGTCTCACTGCCCTTCGTAAAGTCATTGTTGGAAAAGTCAGTCCTCCAACAAGGCGTAGTTTGGTTAGTTACAGCATTTGACGTTTGTATTTTAAAAGGCAGCATTGGAGAGTGTCTTTATAAAGGATGTACAAAACCTGTCACA--CTCTGCCACACAGATGGACTCATGTGCAATGTAGCCATTTAATGAAAC--ACTGGCATTTACCAGATGCAAACTTACTAG-GGATGACAACTAGA----AATGATGTGCTGGATGCACTGGTTTACTTAT----------ATGAATATAACCATCTATCTGTATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGAAATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGATTCACCCAGGAATGCCCAATTCAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 18616 729 - 2515279 -ATGGGAAAGGTGAGCAGGTGAAGGTCATGTAGGAGACGGAAGAACTCACT------CCCCAAGCCCG-TAGGCCTTTGTCCTCCACCCATGGACAGAAGCATCTTGTTAGATGAGGGCTGCCCACAGCCAGGGCTGCAGG-AGAACCTGCCACGGAGCGAGTG-TCAGTAAAGAACCGCTG----ACTGTCACCGTCCCTACTTGGGGGCTGC-TGGGAGATCTGACGCATCTCACTGCCCTTCGTAAAGTAATTGTTGGAAAAGTCAGTCCTCCAACAAGGCATAGGTTGGTTAGTTACAGGATTTGACGTTTGTATTTTAAAAGGCAGCATTGAAGAGTGTCTTTATAAAGGATGTACAAAACCTGTCACA--CTCTGCCCCACAGATGGGCTCATGTGCAATGTAGCCATTTAATGAAAC--ACTGGCATTTACCAGATGCAAACTTACTAG-AGACGACAACTAGA----AATGATGTGCTGGATGCGCAGGTTTACTTAT----------ATGAATATAACCATCTATCTGGATGCATCAAAAGATACACAACATGAGATGCCGATCTATTTCTACTAGTTCATGATCAGGAGGTCAGGACAGGGAAGGAAGAGG-AAACACTTTGACTCATGGTCCTTTATTCTTAGATGCCGTCATCCTGCATATGCAAGGGACATGCATGGCTGACATAATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAACTGAGTCACCCAGGAATGCCCAATTCAGG i manLeu1.NW_012101810v1 C 0 C 0 s cebCap1.NW_016107703v1 376762 742 - 2125214 -CTGGGAAAGGCGAGAAGATGAAGGTCGTGTAGGACACGAAAGAACTTGCT------CCCCAAGCCCA-TAGGCCTTTGTCTTCCACCCATGGACCGAAGCACCTTGTTAGATGGGGGCTGCCCACAGCCAGGGCTGGGGGAAGAACCTGCCATGGAGCAGGTA-TCAGTAAATGACTGCTG----ACTGTCACTGTTCCTACTTGGGGGCCAG-TGGGAGATCAGACACATCTCACTCCCCTTTGTAAAGTGATTATTGAAAACGTCAGCTGTCTAACAAGGCATAGGTTGCTTAGTTATATAATTTAACATTTCTATTTTAAAAGGCAGCCTTGAAGAGTGTCTTT-TAAAGGATGTACAAAACCTGTCACATTCTCTGTCACACAGATTGACTCATGTGCCACGTAGCCATTTAATGAAAC--ACTGGCATTTACCAGATATAAGCTTATTAGCAGATGACAACTAGC----AATAATGTGCTAGATGTGCACATTTGTTTATCCACTGAATCATGAATATAACCATCTCTCTAGGTGCATCAAAAGATACACAACATGAGATGCCAATTTATTTCTACGAGTTTGTGATCAGGTGGTCAGGGCAGGGAAAGAAGAGG-AAAAACTTTAAATCACAGTCCTTTATTCTTAGAAACATTTATCCTACATACACAAGGGACATATATGACTGGAATCATGGAAACAAAGTGGATAAAAGTGAAAGTAACTTAAAGAGATTTACCCAGGATTGCCTAATTCAGG i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60954515 730 - 77573801 TTTGGAGCAGGTGAACACAGGAAAATTATGTAAGAGGCAAAAGAACTTGCTTGTGAGTTTTAAGAGCACTACATCTTTGTCCTCCAGCAAAAGATCTAAGCATCCT----AAGAAGGGCTAACCAGAGccaggatcaaacatagaacctgccccacagtaggtgttcaacaaataactgctgaattaatATACTTGTTCCTATGTGGAAGCTATGTGAGTGATCTG-CACATCCCACTGCACATCATAGAATAATCAATGAGAATGCCGGCCCTCTAACAAGGTATATGTTGATTTATTATGGAATTTAACAAATTCATTTTAAAAGGCAGCACAAAAGAGTGTCTTTATAAAGAACATACAAAACCTGTCATGTTCATCATCATACAGATCAACTTTTGGGCAACACAGCCATTTAATTACTTCAATTAGCATTCACTAGATGTCAA-TTATTAGCAGATGACAACTGGAAAGGAATATTGTCCCAGACATGCATGTTTATTTATGTGTTCAACCATGGGTATAACCATCTCTCTAAATGCTGTGAAACATAGAAAGCAGAAGCTGCCAATTCATTTTTGGAAGTTAAAAAACAGGTAGTGATGACAGAGAA-GAAAACA-AATGAGATCAAATTATTGTCCTCTAT------ATACCGT-----------------GGACATGCTTGTCTGATATAATGG-CACAAAGTGGGTGAAA--AAGAGTAACTTCCACTGACTTACTCAGGAATACCTGATTCAgg i canFam3.chr6 C 0 I 1023 a score=4473385.000000 s hg38.chr7_KI270899v1_alt 26010 1281 + 190869 TGCTGCAGAGAAGAGCATGAGAACCGGGTGTCTTCAGGACAGGTGTGCATCTGGGAGCAGAGTGGGCGTTCATCAGCAGGGAGGAGCAAGGCCTGGGTCGGGGGACACTGGGGCTGCTGTCCCAGAGGCTGGCAGTGTAGCTCTGAACCCCCAAGACTTCACTGAGTCTCCCCTCAACCACCTAAACCAGAATAAACTGATGTAGCAGGACTCCTCAAACACTGTGCAGGGTCTCCATGTCCTCGATGGCCCCTGATGAGCCACAGTACCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCCACATGGGGTCCTGCAGCTCATCCCACACAGCCTCAGATTCCCTCTACAGAACCTGCCCACAGATGTCTTCCGAGACAGGCAATACTGGGAGGCCTGTGGCCC-AGACCCAGGAGGAACCAGCTGAGAGGCTCCGTGGAGGTATCGCTGATGGTGTAACCAGAATGAAAATGCCCACTTCTGTTCTGCTCCCTGAGAACAACTGTCAAGCCAGCATGAGTTTCCAGTTGGAACTTTTCCTTTTCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCCCCCGATGAACTCACTTTGAAAATTATCTTTTGCACTGGGCACCCTTTCAGGAATCACTGAGTGTTAA-TTTTCTCAGTCTGAGTGATAATTTATGAGTCAAACAAGGACAGATCTGAAGCCAGAGGCTGCTCCTGTTGGGAAATCCCTGAGGATGATGTTCCAGGGAAGCCTCCAGCCTTGGGAGTCCCGTGGAACTGAGCCAGCCCAGGTCATGAAGGGAGCTGGTGCCAGACACTGACT---GGGGACCTGCTGGCCTCTGGGCAGACCGCTCTGTCCCTGCACTTGGCCTGCCAGGTATCcctgtgcagtcataccaagtcctgtgctcagaagggccccagagtagtttaaagctctgctgccgcc-cctggaagctcatgattttgaacaacaacagcaaaaaaaaacccacgttttccactcggccccacacattatgtggccTGCGCAGCTGTCAGGCTGTGGCCACAGTGCTGGCATCTCTCACACAATGAAGGCTGCTGGAGTCCTGGCTGACTTGTTTTGACTCTTTTGTGAGGCCCACACCTAAGCTAAACACTCACGTGCCCCC-ACACTGACTCCCCACACTCTAAAGCATGAATCTGCCCCTTTAGCTGGGAGAGGGTCCTCGTGTCATCTGGGTTTTTGGAGAGAAGGTCAAGGGAGCCTGGGTTC s panTro5.chrUn_NW_015975002v1 8493 1280 + 14113 TGCTGCAGAGAAGAGCATGAGAACCGGGTGTCTTCAGGACAGGTGTGCCTCTAGGAGCAGAGTGGCCATTCATCAGCAGGGAGGAGCAAGGCCTGGGTCGGGGGACACTGGGGCTGCTGTCCCAGAGGCTGGCAGCGTAGCCCTGAACCCCCAAGGCTTCACTGAGTCTCCCCTCAACCACCTAAACCAGAATAAACTGATGTAGCAGGACTCCTCAAACACTGTGCAGGGTCTCCATGTCCTCGATGGCCCCTGATGAGCCACAGTACCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCCACGTGGGGTCCTGCAGCTCATCCCACACAGCCTCAGATTCCCTCTACAGAACCTGCCCACAGATGTCTTCCGAGACCGGCAATACTGGGAGGCCTGTGGCCC-AGACCCAGGAGGAACCAGCTGAGAGGCTCCGTGGAGGTATCGCTGATGGTGTAACCAGAATGAAAATGCCCACTTCTGTTCTGCTCCCTGAGAACAACTGTCAAGCCAGCATGAGTTTCCAGTCGGAACTTTTCCTTTTCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCCCCCGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGAGTGTTAA-TTTTCTCAGTCTGAGTGATAATTTATGAGTCAAACAAGGACAGATCTGAAGCCAGAGGCTGCTCCTGTTGGGAAATCCCTGAGGATGATGTTCCGGGGAAGCCTCCAGCCTTGGGAGTCCCGTGGAACTGAGCCAGCCCAGGTCATGAAGGGAGCTGGTGCCAGACACTGACT---GGGGACCTGCTGGCCTCTGGGCAGACCGCTCTGTCCCTGCACCTGGCCTGCCAAGTATCcctgtgcagtcataccaagtcctgtgctcagaagggccccagagtagtttaaagttctgctgccgcc-cctggaagctcatgattttgaacaacaacaacaaaaaaaa-cccacgttttccactcggccccacacattatgtggccTGCGCAGCTGTCAGGCTGTGGCCACAGTGCTGGCATCTCTCACACAATGAAGGCTGCTGGAGTCCTGGCTGACTTGTTTTGACTCTTTTGTGAGGCCCACACCTAAGCTAAACACTCACGTGCCCCC-ACGCTGACTCCCCACACTCTAAAGCATGAATCTGCCCCTTCAGCTGGGAGAGGGTCCTCGTGTCATCTGGGTTTTCGGAGAGAAGGTCAAAGGAGCCTGGGTTC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 53137 1281 + 85365473 TGCTGCAGAGAAGAGCATGAGAACCGGGTGTCTTCAGGACGGGTGTGCATCTAGGAGCAGAGTGGGCGTTCGTCAGCACGGAGGAGCAAGTCCTGGGTCGGGGGACACTGGGGCTGCTGTCCCAGAGGCTGGCAGTGTAGCCCTGAACCCCCAAGACTTCACTGAGTCTCCCCTCAACCACCTAAACTGGAATAAACTGATGTAGCAGGACTCCTCAAACACCGTACAGGACCTCCATGTCCTCGATAGCCCCTGATGAGCCACGGTACCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCCACATGGGGTCCTGCAGCTCATCCCCCACAGCGTCAGATTCCCTCTACGGAACCTGCCCACAGATGTCTTCCGAGACCGGCAATGCGGGGAGGCCTGTGGCCC-AGACCCAGGAGGAACCAGCTGAGAGGCTCCGTGGAGGCATCGCTGATGGTGTAACCAGAATGAAAATGCCCACTACTGTTCTGCTCCCTGAGAACAAGTGTCAAGCCAGCATGAGTTTCCAGTGGGAACTTTTCCTTTTCTCCCCATATTGGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCCTATGAACTCACTTTGAAAATTATCTATTGCATTGGGCACCCTTTCAGGAATCACTGAGTGTTAATTTTTCTCAGTCTGAGTGATAATTTATGAGTCAAACAAGGACAGATCTGAAGCCAGAGGCTACTCCTGTCGGGAAATCCCTGAGGATGATGTTCCGGGGAAGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCCAGGTCATGAAGGGAGCTGGTGCCAGACACTGACT---GGGGACCTGCTGGCCTCTGGGCAGACCGCTCTGTCCATGCACCTCGCCTGCCAGGTATCcctgtgcagtcataccaagtcctgtgctcagaagggccccagagtagtttaaagttctgctgccgcc-cctggaagctcatgattttgaacaacaaca--aaaaaaaaccccacgttttccacttggccctacacattatgtggcctgtGCAGCTGTCAGGCTGTGGCCACGGTGCTGGCATCTCTCACACAGTGAAGGCTGCTGGAGTCCTGGCTGACTTGTTTTAACTCTTTTGAGAGGCCCACACCTAAGCTAAACACTCACGTGCCCCCTACGCTGACTCCCCACACTCTAAAGCATGAATCTGCCCCTTCAGCTGGGAGCGGGTCCTTGTGTCATCTGGGTTTTTGGAAAGAAGGTCAAGGGAGCCTGGGTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33895928 1208 + 185818997 TGCTGCAGAGAAGGGCATGAG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCGTTCTTCAGCAGGGAGGAGTAAGGCCTGGGTCCGGGAACACTGGGGCTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGGATAAACCAATGTAGCCAGACTCCTCGAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGGTGAAAGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCCACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCAACACTGGGAGGCCTGTGGCCC-GGACCCAGGAGGAACCGGCTGAAAGGCTGCGTGAAGGCATCGCTGAT-GCCTCCCCAGAGTGAAAATGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAGCCAGCGTGAGTTTCTGGTTGGAAC-TTTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGACTGTCAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTCTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGA---------------------------------------CTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccccggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------AATTTCCACTCGGCCCCACACATTACGTGGCCTGCCCAGCTGTCAGGCTGGGGCCATGGTGCTGGCGTCTCTCACCCAGTGAAGGTTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCCCACTCTACAGCACGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33511856 1244 + 192294377 TGCTGCAGAGAAGGGCATGAG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCGTTCTTTAGCAGGGAGGAGCAAGGCCTGGGTCCGGGAACACTGGGGCTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGGATAAACCAATGTAGCCAGACTCCTCGAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGGTGAAAGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCCACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCAACACTGGGAGGCCTGTGGCCC-GGACCCAGGAGGAACCAGCTGAAAGGCTGCGTGAAGGCATCGCTGAT-GCCTCCCCAGAGTGAAAATGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAGCCAGCTTGAGTTTCTGGTTGGAAC-TTTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACTCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTCTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGACACTGACT---GGGGACCTGCAGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccccggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------actttccactcggccccacacattacgtggcctgcccAGCTGTCAGGCTGGGGCCATGGTGCTGGTGTCTCTCACCCAGTGAAGGTTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCCCACTCTACAGCACGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4273633 1244 - 9440265 TGCTGCAGAGAAGGGCATGCG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCGTTCTTCAGCAGGGAGGAGCAAGGCCTGGGTCCGGGAACACTGGGACTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGGATAAACCAATGTAGCCAGACTCCTCGAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGGTGAAAGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCCACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCGACACTGGGAGGCCTGTGGCCC-GGACCCAGGAGGAACCGGCTGAAAGGCTGCGTGAAGCCATCGCTGAT-GCCTCCCCAGAGTGAAAATGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAGCCAGCTTGAGTTTCTGGTTGGAAC-TTTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTCTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGACACTGACT---GGGGACCTGCGGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccccggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------ACTTTCCACTCGGCCCCACACATTACGTGGCCTGCCCAGCTGTCAGGCTGGGGCTATGGTGCTGGCGTCTCTCACCCAGTGAAGGTTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACACTGACTCCCCCCACTCTACAGCACAAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16862577 1244 - 21915920 TGCTGCAGAGAAGAGTATGAG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCATTCTTCAGCAGGGAGGAGCAAGGCCTGGGTCCGGGAACACTGGGGCTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGAATAAACCAATGTAGCCAGACTCCTCAAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCCACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCAACACTGGGAGGCCTGTGGCCC-GGACCCAGGAGGAATCGGCTGAAAGGCTGCGTGAAGGCATCACTGAT-GCCTCCCCAGAGTGAAAACGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAGCCAGCTTGAGTTTCTGGTCGGAAC-TTTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCGGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTGTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTTCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGACACTGACT---GGGGACCTGTGGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccctggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------ACTTTCCACTCGGCCCCACACATTACGTGGCCTGCCCAGCTGTCAGGCTGGGGCCATGGTGCCGGCGTCTCTCACCCAGTGAAGGCTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCTGACTCTACAGCATGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 2900 1248 - 21531802 TGCTGCAGAGAAGAGCATGAG-ACCGGGTGTCTTCAGGACAGGTACACATCTAGGAGTGGAGTGGGCATTCTTCAGCAGGGAGGAGCAAGGCCTGGGTCTGGGGACACTGGAGCTGCTGTCCCAGAGGCCGGCAGTGCAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGAATAAACCGATGTAGCCAGACTCCTCAAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCCAACAAGCCACAGTTCCCTCAGGTCCTGGTGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCCGCATGGGATCCTGCAGCTCATCCCCCACAGTCTCAGATTACCTCTGCAGAACCTGCCGACAGATGTCTTCTGAGGCCGGCAACACTGGGACGCCTGTGGCCCGGGACCCAGGAGGAACCGGCTGAGAGGCTGTGTGAAGGCATCGCTGAT-GCCTCCCCAGAGTGAAAATGCCCACTTCTGTTCTGC-CCCCGAGAACAACGGTCAAGCCAGCTTGAGTTTCCGCTCGGAAC-TTTCCGTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACCCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTACGAGTCAAGCAAGGACAGATCTGAGGCCAGAGGCTGCTCCTGTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGGCC-------------AGCTGGTGCCAGACACTGACTGGGGGGGACCTGCGGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTACCAGGTATCcctgtgtggtcataccaagccctgtgctcagaagggccccagaatagtttaacgttctgctgctgctgcctggaagatcatgatgttgagcaa---------------------cctttccactcggccccacacattacgtggcctgcccAGCTGTCAGGCTGGGGCCATGGTGCCAGTGTCTCTCACCCAGTGAAGGCTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTCGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCCCACTCTACAGCACGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATA-GGGTTTTGAGAGAGAAGATCAAGGAAGCCTGGGTTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 19345 1244 - 2515279 TGCTGCAGAGAAGAGCATGAG-ACCGGGTGTCTTCAGGACAGGTGCACATCTAGGAGCGGAGTGGGCATTCTTCAGCAGGGAGGAGCAAGGCCTGGGTCCGGGAACACTGGGGCTGCTGTCCCAGAGGCCGGCAGTGGAGCCCTGAACCCCCAAGACTTCACTGAGACTCCCCTCAGCCACCTAAACTGGAATAAACCAATGTAGCCAGACTCCTCAAACACCGTACAGGGTCTCCAGGTCCTCAAGGGCCCCTGACGAGCCACAGTCCCCTCAGGTCCTGATGAAGGAGCTGGTGCTGCCTCCTGCCTTTCCCTGCATGGGATCCCACAGCTCATCCCCTACAGCCTCAGATTCCCTCTGCAGAACCTGCCCACAGATGTCTTCTGAGGCTGGCAACACTGAGAGGCCTGTGGCCC-GGACCCAGGAGGAACCTGCTGAAAGGCTGCGTGAAGGCATCGCTGAT-GCCTCCCCAGAGTGAAAACGCCCACTTCTGTTCTGC-CGCCGAGAACAACGGTCAAACCAGCCTGAGTTTCTGGTCGGAAC-TTTCCCTTCCTCCCCATGTTTGTCGCTGTTTTAATGGACATTGCCTGGCTATTAAATCTCCTGATGAACTCACTTTGAAAATTATCTATTGCACTGGGCACGCTTTCAGGAATCACTGACTGTTAA-TTTCCTCAGTCTGAGTGATAATCTATGAGTCAAGCAAGGACCGATCTGAGCCCAGAGGCTGCTGCTGTTGGGAAATCCCTGAGGATGATGCTCCGGGGAGGCCTCCAGCCTTGGGAGTCCCCTGGAACTGAGCCAGCCC-------------AGCTGGTGCCAGACACTGACT---GGGGACCTGCGGGCCTCAGGGCAGACTGCTCTGTCCCTGCACCTGGCCTGCCAGGTATCcctgtgcggtcataccaagccctgtgctcagaagggccccggaatagtgtaacgttctgctgctgccacctggaagatcatgatgttgagcaa---------------------ACTTTCCACTCGGCCCCACACATTACGTGGCCTGCCCAGCTGTCAGGCTGGGGCCATGGTGCCGGCGTCTCTCACCCAGTGAAGGCTGCTGCAGTCCTGGCTGACTTGTTTTGACTATTTTGTGAGGCCCACACCTGAGCTAAACACTCACGTGCCACCCACGCTGACTCCCCCCACTCTACAGCACGAACCTGCCCCTTCAGCTGGGGGAGGGTCTCCATGTCATC-AGGTTTTGGGAGAGAAGATCAAGGGAGCCTGGGTTC i manLeu1.NW_012101810v1 C 0 C 0 s cebCap1.NW_016107703v1 377504 1250 - 2125214 TGCTTCAGGGAAGAGCATGAGAACTGGGTGTCTCCAGGACAGGTGTGCATCTAGGAGCAGAGTGGGCGTTCATCAGCGGGGAGGAGCAAGGCCTGGGGCAGGGGATACTGGGGCTGCTGTCCCATAGGCCAGAAGTGTGGCTCTGAACCCCCCAGAGGTCACTGAGGTGCCCCTCGACCACTTAAACTGGAATAAACAGCTTTCACCAGACTCCTCAAACACCACACAGGCTCTCTATGTCCTCGAGGG-CCCTGATGAGCCACAGTCCCCTCACATCCTGGTGAAGGGGTTGGTGCTGCCTCCTGC----CCCCACATGGGATCCTGCAGCTTATCACCCACAGCCTCAGTTTCCCTCTACAGAGCCTCCACACAGACGTCTTCTGAGGCCAACAATACTGGGAGGCCTGTGGCCC-AGACCCAGGGGCAACCAGCTAAGAGGCTCCATGGAGGCTTCGCCAGTGGTCTCCCTGGAGTGGAAATGCCCACTTCTATTCTGTGCCCTGAGAACAGCTGTCAAGCCAGCATGAGTTCCCAGTCAGAACTTTTCCATTCATGCCCATGTTTGTTGCTGTTTTAATGGACATTGCCTGGCTGTTAAATCTCCTGATGAACTCAAGTTGAAAATGATCTGTTCCAATATGCACCCTTTCAGTAATCACTGAGTGTTAA-TTTTCTCAGTCTGAGTGATAATTTGTGAGTCAAACAAGGACAGATCTGAGGTCAGAGGCTGCTCCCGTTGGGAAATGCCTGAGGATGATGTTCTGGGGA-------AGTTTTGGGATTCCCCTAGGACTGCACCAACCCAGGTCATGAAGGGAGCTGATGCCAGACACTGAGT---GGGGACCTGCTGGCTTCTGGACAGACCACTCTGTCCCTGAACCTGGCCTGCCAGTTACCcctgtgtggt-----caagtcttgtgctcagaagggccccagaatagtttaatgttctgctgctgccatctggaacctcatgattttgaacaa-----------aaaaatccacgtttaacacttggctctacacattatgtggcctgcccAGTTTTCAGGCTGGGGCCATGGTGCTGGCCTCTCTCACACACTGAAGGCTGCTGGAGTCTTGGCTAACTTGTTTTGACTCTT--GTGAGGCACACATCTGAGATAAACACTCAAGCGCCCCCAATGCTAACTCCCCTGACTCTACAGCATGAATCTGTCCCTTCAGCTGTGGGAGGGTCCTCATGTCATCTGGGTTTTGGGAG---AGGTCAAGGGAGCCTGGGTTC i cebCap1.NW_016107703v1 C 0 C 0 e canFam3.chr6 60955245 1023 - 77573801 I a score=100350.000000 s hg38.chr7_KI270899v1_alt 27291 22 + 190869 TAGTTCTTCAGTAATCAAGAGT s panTro5.chrUn_NW_015975002v1 9773 22 + 14113 TAGTTCTTCAGTAATCAAGAGT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 0 22 - 432965 TAGTTCTTCAGTAATCAAGAGT i gorGor5.CYUI01015914v1 N 0 C 0 s nomLeu3.chr20 54418 22 + 85365473 TAGTTCTTCAGTTATCCAGAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897136 22 + 185818997 TAGTTCTTCAGTCATCCAGAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33513100 22 + 192294377 TAGTTCTTCAGTCATCCAGAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4274877 22 - 9440265 TAGTTCTTCAGTCATCCAGAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16863821 22 - 21915920 TAGTTCTTCAGTCATCCAGAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 4148 22 - 21531802 TAGTTCTTCAGTCATCCAGAGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 20589 22 - 2515279 TAGTTCTTCAGTCATCCAGAGT i manLeu1.NW_012101810v1 C 0 I 5 s cebCap1.NW_016107703v1 378754 22 - 2125214 TAGTTCTTTAGTTATCTAGAGT i cebCap1.NW_016107703v1 C 0 C 0 e canFam3.chr6 60955245 1023 - 77573801 I a score=19317.000000 s hg38.chr7_KI270899v1_alt 27313 5 + 190869 AAGGG s panTro5.chrUn_NW_015975002v1 9795 5 + 14113 AAGGG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 22 5 - 432965 AAGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54440 5 + 85365473 GAGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897158 5 + 185818997 GAGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33513122 5 + 192294377 GAGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4274899 5 - 9440265 GAGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16863843 5 - 21915920 GAGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 4170 5 - 21531802 GAGGG i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 378776 5 - 2125214 GAGGG i cebCap1.NW_016107703v1 C 0 C 0 e canFam3.chr6 60955245 1023 - 77573801 I e manLeu1.NW_012101810v1 20611 5 - 2515279 I a score=104565.000000 s hg38.chr7_KI270899v1_alt 27318 122 + 190869 TCTTACCTGTT-----CACAGTTCCCTGTGGCTGCTTTACAGAAAGCAGGAAGTGGCCACTTCAGCCACACGGCTGCATTTCCAGCTCAGTCCAGGCAGAGCTGCACCCTGCCTTGCACCTCTGCAG s panTro5.chrUn_NW_015975002v1 9800 122 + 14113 TCTTACCTGTT-----CACAGGTCCGCGTGGCTGCTTTACAGAAAGCAGGAAGTGGCCACTTCAGCCACATGGCTGCATTTCCAGCTCAGTCCAGGCAGAGCTGCACCCTGCCTTGCACCTCTGCAG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 27 122 - 432965 TCTTACCTGTT-----CACAGGTCCCTGTGGCTGCTTTACAGAAAGCAGGAAGTGGCCACTTCAGCCACACGGCTGCATTTCCAGCTCAGTCCAGGCAGAGCTGCACCCTGCCTTGCACCTCTGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54445 122 + 85365473 TCTTACCTGTT-----CACAGGTCCCTGTGGCTGCTTTACAGAAAGCAGGAAGTGGCCACTTCAGCCACATGGCTGCATTTCCAGCTCAGTCCAGGCAGAGCTGCACCCTGCCTTGCACCTCTGCAG i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 378781 127 - 2125214 TCTTACATGTCCCCAACCCAGGTCCCTGTGGCTGCTTTGCAGAAAGGAAGAAGTGGCCACTTCAGCCACACAGCTGCATTTCCAGCTCAGTCCAAGTAGAGCTGTGCCCTGCCATGCACCTCTGCAG i cebCap1.NW_016107703v1 C 0 I 2470 e canFam3.chr6 60955245 1023 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C a score=29500.000000 s hg38.chr7_KI270899v1_alt 27440 58 + 190869 TTCCTGAGGGGAGTCCTTAACTGAGCCAGGGCGAGTCCTGGGGGCACTCTGCCCCTGT s panTro5.chrUn_NW_015975002v1 9922 58 + 14113 ATTCTGAGGGGAGTCCTTAACTGAGCCAGGGCGAGTCCTGGGGGCACTCTGCCCCTGT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 149 58 - 432965 ATCCTGAGGGGAGTCCTTAACTGAGCCAGGGTGAGTCCTGGGGGCACTCTGCCCCTGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54567 57 + 85365473 ATTCTG-GGGGAATCCTTAACTGAGCCAGGGCGAGTCCTGGGGGCACACTGCCCCTGT i nomLeu3.chr20 C 0 C 0 e canFam3.chr6 60955245 1023 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e cebCap1.NW_016107703v1 378908 2470 - 2125214 I a score=41240.000000 s hg38.chr7_KI270899v1_alt 27498 45 + 190869 GGACACTGCCCCTGGGCAGGCCATGAATCTCCTCTGCTCCCACAC s panTro5.chrUn_NW_015975002v1 9980 45 + 14113 GGACACTGCCCCTGGGCAGGCCATGAATCTCCTCTGCTCCCACAC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 207 45 - 432965 GGACACTGCCCCTGGGCAGGCCCTGAATCTCCTCTGCTCCCACAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54624 45 + 85365473 GGACACTGCCCCCGGGCAGGCCATGAATCTCCTCTGCTCCCACAC i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 381378 45 - 2125214 GGACACTGCCCCTGGGCAGGCCATGAGTTTCCTCTGCTCCCACAC i cebCap1.NW_016107703v1 I 2470 I 13 e canFam3.chr6 60955245 1023 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C a score=27162.000000 s hg38.chr7_KI270899v1_alt 27543 55 + 190869 TCTAGAGTTCAACGGGTCTCAGGGGCTCTGCCTGAGG-----ACTGCCCTTCAACCAGGT s panTro5.chrUn_NW_015975002v1 10025 55 + 14113 TCTAGAGTTCAACAGGTCTCAGGGGCTCTGCCTGAGG-----ACTGCCCTTCAACCAGGT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 252 55 - 432965 TCTAGAGTTCAACAGGTCTCAGGGGCTCTGCCTGAGG-----ACTGCCTTTCAACCAGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54669 60 + 85365473 TCTAGAGTTCGGCAGGTCTCAGGGGCTCTACCTGCAGAGCACACTGCCCTTCAACCAGGT i nomLeu3.chr20 C 0 C 0 e canFam3.chr6 60955245 1023 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e cebCap1.NW_016107703v1 381423 13 - 2125214 I a score=177384.000000 s hg38.chr7_KI270899v1_alt 27598 304 + 190869 ATTCGTAATTTCCCCAAGACCCAGGCTTGCTGAGTCACTCAGTTACCTGAATGCTTTTTTCACAAAGGGATGACTGTGCTGCTCCGTCTTCCTTCTTTTTTGTTTGCAAGGCCACAGGGAAATCTGGATCCTCTGGTGAAAAAGCAAATCCAGTtgctgctgctgctgctgct--gctgctgctgctgctgctgctgctgcCGCCGCCGCCGCCGGTTCTTGTAAATGTCCTCACTT----GGTTTCTGGGCAGCAACTTCCTTGACTTGCCTGGGGAGCGGATCTGAGCTGCATTTACCAGGCCATGCC s panTro5.chrUn_NW_015975002v1 10080 278 + 14113 ATTCGTAATTTCCCCAAGACCCAGGCTTGCTGAGTCACTCAGTTACCTGAATGCCTTTTTCACAAAGGGATGACTGTGCTGCTCCGTCTTCCTTCTTTTTTGTTTGCGAGGCCACAGGGAAATCTGGATCCTCTGGTGAAAAAGCAAATCCAGTTTctgctgctg----------------gctgctgctgctgctgctgcCG------------GTTCTTGTAAATGTCCTCACTT----GGTTTCTGGGCAGCAACTTCCTTGACTTGCCTGGGGAGCGGATCTGAGCTGCATTTACCAGGCCATGCC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 307 306 - 432965 ATTCGTAATTTCCCCAAGACCCAGGCTTGCTGAGTCACTCAGTTACCTGAATGCCTTTTTCACAAAGGGATGACTGTGCTGCTCCGTCTTCCTTCTTTTTTGTTTGCGAGGCCACAGGGAAATCTGGATCCTCTGGTGAAAAAGCAAATCCAGTttcttcttcttcttcttcttctctgctgctgctgctgctgctgctgctgctgcCGCCGCCAGTTCTTGTAAATGTCCTCACTT----GGTTTCTGGGCAGCAACTTCCTTGACTTGCCTGGGGAGCGGATCTGAGCTGCATTTACCAGGCCATGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 54729 265 + 85365473 ATTCATAATTTCCCCAAGACCCAGGCTTGCTGAGTCACTCAGTTACCTGAACG--TCTTTCACGAAGGGATGACTGTGCTGCTCCGTCATCC-TCTTTTTTGTTTGCGAGGCCACAGGGAA------ATACTCTGGTGAAAAAGCAAATCCAGTTTcttcttctt--------------------ctgctgctgctgctgctg------------GTTCTTGTAAATGTCCTCACTT----GGTTTCTGGGCAGCAACTTCCTTGACTTGCCTGGGGAGTGGATCTGAGCTGCATTTACCAGGCCACGCC i nomLeu3.chr20 C 0 C 0 s otoGar3.GL873611 2090982 261 - 8137123 ATTCATAATTTCTATGAGACTCAGCTTTGCTGAATGACTCAGATACATGAATG--TTTTTCACAA---GACGACTGTGCTGTCATTGTTTCT---TATTTCACTTGTGCAGTTACAGGGAGATCTGGGTACTCTGGTGAAAAGGCAAAACATGTTT-----------------------------CTGCTATTAGTGCTGTTG------------GTTCTTGTCAATGTCCTCATTTACAAGTTGCCTCAAAGGCAACTCCCTTGGCTTTGCTGAGGAATGAATCTGAGCTGCATTAACCAGGTGGTACC i otoGar3.GL873611 N 0 C 0 e canFam3.chr6 60955245 1023 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e cebCap1.NW_016107703v1 381423 13 - 2125214 I a score=659532.000000 s hg38.chr7_KI270899v1_alt 27902 643 + 190869 CAGGGGAAGTGATCAGTGTGGGACCGTGAAGCTGGATTTCCCCAGGAGCTCCCTCCAACCTTCTGGGATGATGATAAGACTTGGGATGAACCAAGGATCTTGAACCATGGGACAATGTGA-AGTCTAGACCTAGTGGAGGAAGAGAAAGGCTACGG---GAAGGGCAGGCTTCACGttactgagcatccgctacctgccacacactttcacgtggccttattctgtgtgtttctcacagcacccttgagaaatagagactacgatcacatcttttacataaaagaaaaccaccatccagggaggcgaagtcccttgctcaCAGACtgtcatgtgggaagctctctggatgcaatgatgtcctccagttgcattaccaggcaagctgtcccagagttcatggagcggaaaggctcgagaagcaactgaggatgctcgaatcacaggtttataaaatccattcataaaacacagcaagaagctgagggaaggagatgggagggccgtatgacctgattcctgtgctgtcaacattcatcag-ttctcttctttctctgctagtcaacctcacccactcaggtgtgaccacgaggaccagagccgaggtctgggcaagagtgctcacagctgaaggg--------cttatgacacacac s panTro5.chrUn_NW_015975002v1 10358 642 + 14113 CAGGGGAAGTGATCAGTGTGGGACCGTGAAGCTGGATTTCCCCAGGAGCTCCATCCAAGCTTCTGGGATGATGATAAGACTCGGGATGAACCAAGGATCTTGAACCATGGGACAATGTGA-AGTCTAGACCCAGTGGAGGAAGAGAAAGGCTACGG---GAAGGGCAGGCTTCACtttactgagcatccgctacctgccacacactttcacgtggc-ttattctgtgtgtttctcacagcacccttgagaaatagagactacgatcacatcttttacataaaagaaaaccaccatccagggaggcgaagtcccttgctcaCAGACtgtcatgtgggaagctctctggatgcaatgatgtcctccagttgcagtaccaggcaagctgtcccagagttcatggagcggaaaggctcgagaagcaactgaggatgcttgaatcacaggtttataaaatccattcgtaaaacacagcaagcagctgagggaaggagatgggagggccgtatgacctgattcctgtgctgtcaacattcatcgg-ttctcttctttctctgctagtcaacctcaccccctcaggtgtgaccacgaggaccagagccgaggtctgggcaagagtgctcacagctgaaggg--------cttatgacacacac i panTro5.chrUn_NW_015975002v1 C 0 C 0 s gorGor5.CYUI01015914v1 613 643 - 432965 CAGGGGAAGTGATCAGTGTGGGACCGTGAAGCTGGATTTCCCCAGGAGCTCCCTCCAAGCTTCTGGGATGATGATAAGACTCGGGATGAACCAAGGATCTCGAACCATGGGACAATGTGA-AGTCTAGACCCAGTGGAGGAAGAGAAAGGCTACAG---GAAGGGCAGGCTTCACGTTACTGAGCATCCGCTACCTGCCACAcactttcacgtggccttattctgcgtgtttctcacagcacccttgagaaatagagactacgatcacatcttttacataaaagaaaaccaccatccagggaggcgaagtcccttgctcaCAGACtgtcatgtgggaagctctctggatgcaatgatgtcctccagttgcagtaccaggcaagctgtcccagagttcatggagcggaaaggctcgagaagcaactgaggatgctcgaatcacaggtttataaaatccattcgcaaaacacagcaagaagctgagggaaggagatgggagggccgtatgacctgattcctgtgctgtcaacattcatcgg-ttctcttctttctctgctagtcaacctcacccactcaggtgtgaccacgaggaccagagccgaggtctgggcaagagtgctcacagctgaaggg--------cttatgacacacac i gorGor5.CYUI01015914v1 C 0 I 9 s nomLeu3.chr20 54994 646 + 85365473 CAGGGGAAGTGATCAGTGTGGGACTGTGAAGCTGGATTTCCCCAGGAGCTCCCTCCAAGCTTCTGGGATGATGATAAGACTCGGGACGAACCAAGGATCTCGAACCATGGGACAATGTGA-AGTCTAGACCCAGTGAAGGAAGAGAAAGGCTGCGGGACGAAGGGCAGGCTTCACAttactgagcgtccgctatctgccacacactttcacgtggccttattctgtgtgtttctcacagcacccttgagaagtagagacgacgatcacatcttttacataaaagaaaaccaccatccagggaggcaaagtcccttgctcaCAGACtgtcatgtgggaagctctctggatgcaatggtgtcctccagctgcagtaccgggccagctgtcccagagttcacggagcggaaaggctcaaggagcaacttaggatgcttgaatcacaggtttataaaatccattcgtaaaacacagcaggcagctgagggaaggagatgggagggccatacgacctgattcctgtgctgtcaacattcttcag-ttctcttctttctctgctagtcaacctcacccccttaggtgtgaccacgaggaccagagctgaggtccgggcaagagtgctcacagctgaaggg--------gttatgacacacac i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 381436 641 - 2125214 CAGGGGCAGTGATCAGTGTCGGGGTGTGAAGCTGGATTTCTCCAGGAGCTCCCTCCAAGCTTTTTGGGTGATGATAAGACTTGGGATGAATTCAGGATCTCAAACCAAGGGACAATGTGA-AGTCTAGACCCAGTGGAGGAAGAGAAAGGCTACGGGAAGAAGGGCAGGCTTCACAttactgagcatccattatctgccacacacttccacgtgtc-ttattttatgcatttctcacaacagccttgagaagtagaaattacaatcacatcttttacagaagagaaaaacaccttcca-ggaggtgaagtcccttgctcatagaccaTGAtgtgggaagctctccggatgcaatggtgtcctccagttgcagtatcaagcaagctattccagagttcatagaatggaaaggtttgagaagcaatttaaggtgcttgaatcagaggtttataaaatccattcataaaacacagcgagaagctgagggaaggagatgggAGGGCCACATGACCCGATTTCTGTGTTGCAAACATCCATCGGTTTCTCTTCTTTCTCTGCCAGT----TTCACCCACTCAGGTGTGACCACAAGGACGAGAGCCGAGGTGTGGGCAAGAGTGCCCACAGATGAAGGT--------CCTGTGACACACAC i cebCap1.NW_016107703v1 I 13 C 0 s otoGar3.GL873611 2091243 613 - 8137123 CAGGGCCA-TGATCAGTGTGGGAGTGTGGCATTAGATCTCCCCAGGAGCTCCTTGCAAGCTTCTGAGATGATTGTGAGACAT-GCCTGGACCAGAGATCCC-AACCACCAGACAGTGTGGCAGTCTAGACCCAGCAGAGGAC-AGAAAGGCTGTGG---GAA-GGCAGATTTCATATCACCCAGCACTTATCACCTGCCACACACT--CATGTGCC-TTACTCTATTTTGTCTGCACACCAATCTGGAGAAGAAGAGATTATTCTCACATCTTTTACAAAGGAGAAAGCAGCCA-CCAGGGAGGTGAAGTCCCTT-TTCACAGGCtgtcagatgggaagtcctctgaatgagatgatatcctccagttacagtaccaggcaagctatccctgagctcatggaacaggaaggctcac--agcacct-aatctgcttgaatca-------ACCAAA---------AAGGTGCTGGGAGGAG-TAGGGGAAGGAGA-Gggaaggccatattacccgattcccaag-tgcaaacattcacagg-ttctctt-------tgccagtcagcctcacctgttcgtgtgtgaccatgaggaccagagccgaggtctgaacaagagcatccaccactgcagggacccaggtcctgtgatacacag i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60955245 1023 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C a score=423362.000000 s hg38.chr7_KI270899v1_alt 28545 715 + 190869 cggctcaacgggacagacatgggacaagtgtgcctgatcatggtggcgttgccaagaagcagctgtcgcactgccatgggttctacgtgtttcttgggcagaggacgcatgggaccagaatgggcaccaggaat-ggTGGTGAACAAAGGCCCCATGGTTCTGCATGTTTAGGTGTCTCTTGTATAAAGGCACATTGTGAATTGAACATTTAGTGCCCAGGAGCCTCATGCATATTAAGTATCTCTTGGCCCTTGTGTCTCTTCCTTCCCACATGTAACATACCTGTTCTCTGTAACTATCTAT---TCTGAACGTATCTAAAAACCATGTCTTGCCTGTGTTATACAAACCACATGCATACTCACGTTCTCTGATGTAGCTGAATGTTTCCTAAGGCCAGGGCACATTTCAGGGTCACATAG-AGTGGAGAGAGGGACCAAAATAGCCTTGCTCTGTTTGAC-TCCCAGCCGAGATGTCTGCTGGGCAGCACTGCCTCTGTAGGCTCTAATGGGGGAAGGGAGCTCAGGGGAGCCTCTGGGGCTGGGCAGGCTACCAGAGGGTGTGGACATTTGGGTGGACCCTGACGGAGGACTTGGGTTTCCTTGGGAGGAAGTGTCAGGAAGGGCATCTGGGGCTGAGAGCACTGTGTGGGCAACAGAAGGAAGGAAACTGTGGCTGGCTGGGAAGGGATGGTACGGG-GGACAGGGTGAGACTTCTG s panTro5.chrUn_NW_015975002v1 11000 715 + 14113 cagctcaatgggacagacatgggacaagtgtgcctgatcatggtggagttgccaagaagcagctgtcgcactgccatgggttctacgtgtttcttgggcagaggacgcatgcgaccagaatgggcaccaggaat-ggtggtgaacgaAGGCCCCATGGTTCTGCATGTTTAGGTGTCTCTTGTATAAAGGCACATTGTGAATTGAACATTTAGTGCCCAGGAGCCTCATGCATATTAAGTATCTCTTGGCCCTTGTATCTCTTCCTTCCCACATGTAACATACCTGTTCTCTGTAACTATCTAT---TCTGAACGTATCTAAAAACCATGTCTTGCCTGTGTTATACAAACCACATGCATACTCACGTTCTCTGATGTAGCTGAATGTTTCCTAAGGCCAGGGCACATTTCAGGGTCACATAG-AGTGGAGAGAGGGACCAAAATAGCCTTGCTCTGTTTGAC-TCCCAGCCGAGATGTCTGCTGGGCAGCACTGCCTCTGTAGGCTCTAATGGGGGAAGGGAGCTCAAGGGAGCCTCTGGGGCTGGGCAGGCTACCAGAGAGTGTGGACATTTGGGTGGACCCTGACGGAGGACTTGGGTTTCCTTGGGAGGAAATGTCAGGAAGGGCATCTGGGGCTGAGAGCACTGTGTGAGCAACAGAAGGAAGGAAACTGTGGCTGGTTGGGAAGGGATGGTATGGG-GGACAGGGTGAGACTTCTG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 55640 713 + 85365473 cggctcgatgggacagacatgagacaagtgtgcccgatcgtggcggggctgccaagaagcagctgtcgcactgccatgggttctacgtgtttcttgggcagaggacacatgggaccagaatgggcaccaggaat-ggtggtgaacgaAGGCCCCATGGTTCTGCATGTTTAGGTGTCTCTTGTATAAAGGCACCTTGTAAATTGAACATTTAGTGACCAGAAGCCTCATGCATATTAAGTATCTCTTGGCCCTTGTGTCTCTTCCTTCCCACATGTAACATGCATGTTCTCTGTAACTATCTAT---TCTGAACGTACCTAAAAACCATGTCTTGCCTGTGTTATACAAACCACATGCATACTCCTGTTCTCTGATGTAGCCGAATGTTTCCTAAGGCCAGGGCACATTTCAGGGTCACATGG-AGTGAAGAGAGGGGCCAAAATAGCCTTGCTCTGTCTGAC-TCCGAGCCAAGATGTCTACTGGTCAGCACTGCCTGTGTAGGCTGTGATGGGGGAAGGGAGCTCAGAGGAGCCTCTGGGGCTGGGCAAGCTACCAGAGAGTGTGGACATTTGGGTTGACCCTGACGGATGACTTGGGTTTTCTTGGGAGGAAGTGTCAGGAAGGGCATCTGGGGCTGAGAGCACTGTGTGGGCAACAAAAGGAAGGAAAC--TGGCTGGCTGGGAAGGGCTGGTATGGG-GGACAGGGTGAGACTTCTG i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 382077 703 - 2125214 TGGCTCAGTGGGACAGACATGGGACAAGTGTGTCTGATGGTAGTAGGGCTGCC---AAGCAGCTGTCACACTGCCAC-AGTTCTACATgtttcctggacagatgacacatgggaccaacatgggcgccatgaat-ggtggtgaacgaAGACCCCAGGGTTCTGCATGTTTAGGTGCCTCTTGTATAAAGGCACATGG-----TGGACATTTCCTGCCCAGGAGCCTCATGCATATTAATTATCTCTTGACCCTTGCGTCTCTTCTCTTC--CATGTAACATGCATGTTCTCTGTAACCATGTAT---TCTGAATGTATCTAAAAATAATGTCTTGCCTGTGTGATACAAATCACATGCATATTCACGTTCTCTGATGTAGCTG-ATGTTCCCTAAGGCCAGGGCACATTTcagggtcatatag-agcagagagaggggccaagagagtcttgctctgtctgac-tccaagtcaagatgtctactaggcagcactgcctctgcaggctttaaatgggaaagggagttcagaggaagctctgggcctgggcaggctcccagagggcgtggacatttgagttgaccctgatggatgacttggatttccttacgagaaagtgtcaggaagggcatctggggctgagagcactgtgtgagcaacagaaggaaggaaACTGTGGCTGGCTGCGAAGGGATGGTATCGG-GGACGGGGTGAGACCTCTG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2091856 605 - 8137123 tggcctgat-agacaaacatagca-atgtgtgcctggccacagtggagctgcc---aggcagctgccccacagccgcaggtgttacgtgtttcctgggcagaggacacctgggactgaaatgggcaccatcagtgggtggcGAGCACAGACCTCCAGATGCTGCATGT---------------------------------------------------------------GCATGAAGTATCCCTTGGCCCTC-TGTCTCTTCCTGCCCATATGTAACACGCATGTGCTCTATAATTACCTTTCTACCTGAATATATCTGAA---CAGATCCTGCCTGTATTGTATAAACC-CAAGCACACTCATCTTCTCCAATGTAATTGAATGTTCTCTAA-GCCAAGTCTTATATCAGACTCACACAGCACTAGCGTGAGGGGCTAGGATAGCCTTGCTCTTTCTCACACCCCAGCC---------------TAGTGTTCCCTCCATGGGCTCTCATGAGAGGAGGGAACTCAGAAGAGC----AGTCCTGGG----------------GTAGA------GGTTGACCTTGAAAGATGACTTCAATTTCCTCTGGAGAAGGTGTCAGGGAAGAAATGTGAGGCTGAGAGGACAGTGTGGGCCAAGGAAGGAAGGAAAC--CAGAGTACTGGGAGAGACTGCTGTTGGCACACAAGGCAAGACCTCCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60955245 1023 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=170744.000000 s hg38.chr7_KI270899v1_alt 29260 216 + 190869 GCCCTGGGTGCTCAGATGAAGACCTGGGGTTGCCTAGTGGCTGGAAACACACACCAGCTGTGGCAACTTGACCTCTGGGATGTGAGTGTGCAGGCAGCTGCTGAGAACGGCTGTGGATTTGGAGATGTGGCTACAGGGAATGGGCAGTGGATTCATCTGGGAATTCTGCAGTCAGTGGCCCATAG-----------------AGGAAACAGCCTGGAAATGAGACTGCAGATA s panTro5.chrUn_NW_015975002v1 11715 216 + 14113 GCCCTGGGTGCTCAGATGAAGACCTGGGGTTGCCTAGTGGCTGGAAACACACACCAGCTGTGGCAACTTGACCTCTGGGATGTGAGTGTGCAGGTAGCTGCTGAGAACGGCTGTGGATTTGGAGATGTGGCTACAGGGAATGGGCAATGGATTCATCTGGGAATTCTGCAGGCAGTGGCCCATAG-----------------AGGAAACAGCCTGGAAATGAGACTGCAGATA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 56353 216 + 85365473 GCCCTGGGTGCTCAGATGAAGACCTGGGGTTGCCTAGTGGCTGGAAACACACGCCAGCTGTGGCAACTTGACCTCTGGGATGTGAGTGTGCAGGCAGCTGCTGAGAACGGCTGTGGATTTGGAGATGTGGCTACGGGGAATGGGCAATGGATTCATCTGGGAATTGTGCAGGCAGTGGCCCATGG-----------------AGGAAACAGCCTGGAAATGAGACTGCAGATA i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 382780 221 - 2125214 GCCGTGGGTGCTCAAATGAAGACCTGGGGCTGCCTAGTGGCTGGAAGCACAGACCAGTTGCGGCAGCTTGACCTCCAGCA-----------AGACAGCTGCTAAGAACAGCTGTGGATTTCGAGATGTGGCTCCAGGGAAT-GGCAAGGGATTCCTCTGGGAATTCTACAGGCAGTGGTCCATGGAAGATGGAAACTCCCTTAGGAAATAGCCTGGAAATGAGACTGCAGATA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2092461 221 - 8137123 GGCCTGGGTGCTCAGCTGAAGACCTGGGGTTACCTTGTGCCAGGAATTATATGCTAGCTGCAGCAGCATGACCCCCAATA-----------AGGCAGCTGCCGAGGAAAGCTGTGGCTTTGTAGACAGGACTGCAGGAAACAGGCAATGGATGAATCTGGGAATTCTGCAGATGGTGA-CTGTGGAGGATGCAGCTTCTTCCACAAAGCAGGCTGAGAAGGAGACTGCAGAGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60956268 215 - 77573801 GCCCTGAGTGCTCAGGTGAACACCT-GGCCTGCTTTGTACCTGAAAG-ATATGCCAGC-ACAGCAGCTTGACTACCAACT-----------AAG--ACTACTGAGGAAGTTTGTGGGTTTGGAGACATGACTGCAGGGAACGGAGGGCAGGTTCATCTGGGAATTCTGAAGGCAATGT-CTATAGAAAGTGGAGATCCCTCCATGAGGTAG-TTAGAAATGAAGCTAGAGATA i canFam3.chr6 I 1023 I 285 e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=324572.000000 s hg38.chr7_KI270899v1_alt 29476 483 + 190869 CGTGCTAAAGAGGCTGGAGGAACAGTGACCCCAGTACAAGTTTATGGATCTTATCCACAATCTAAAGAAATGGAGGCCAAATGG--------------------CTTTTGAAATTCTAAAATACATGCAGAGGAA---GAGTAA-TGCTTCATGGGAGAGCCAGACTCTTACTGGCAGTGACGCTACACGGTAGAGCTCTG-TTCCTCCTGCCCATGTCTGTGGTTGGGGCTGGGGT-AGTGCATAA------ACATGACGCTGATGAGGCCCAAGCATTGTTGGAAAAGAATTCAGCAGCTGCCACAAGAATCTTGAATCCGTGGGTGAAGACCTTGACTTTTTCTGGGACCAATGTGGTCAAGAACAAAGTAAAATAATGACAAC-AAACACTGTTCAGTTTTCCAAATATAAGCTATTTTAAATACTCTACATTTACCCTCAAAGACTGACATAACTTAGAATAACTTTTATAACAGCAAGGATGAGAACTAAAACTTAAATTGTAAATACAA s panTro5.chrUn_NW_015975002v1 11931 483 + 14113 CGTGCTAAAGAGGCTGGAGGAACAGTGACCCCAGTACAAGTTTATGGATCTTATCCACAATCTAAAGAAATGGAGGCCAAATGG--------------------CTTTTGAAATTCTAAGATACATGCAGAGGAA---GAGTAA-TGCTTCATGGGAGAGCCAGACTCTTACTGGCAGTGACGCTACACAGTAGAGTTCTG-TTCCTCCTGCCCATGTCTGTGGTTGGGGCTGGGGT-AGTGCACAA------ACATGACGCTGATGAGGCCCAAGCATTGTTGGAAAAGAATTCAGCAGCTGCCACAAGAATCTTGAATCCGTGGGTGAAGACCTTGACTTTCTCTGGGACCAATGTGGTCAAGAACAAAGTAAAATCATGACAAC-AAACACTGTTCAGTTTTCCAAATATAGGCTATTTTAAATACTGTACATTTACCCTCAAAGACTGACATAACTTAGAATAACTTTTATAACAGCAAGGATGAGAACTAAAACTTAAATTGTAAATACAA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 56569 482 + 85365473 CGTGCTGAAGAGGCTGGAGGAACAGTGACCCCAGTACAAGTTTATGGATCTTATCCACAATCTAAAGAAAGGGAGGCCAAATGG--------------------CTTTTGAAATTCTAAAATACATGCAGAGGAA---GAGTCA-TGCTTCATGGGAGAACCAGACTCTTACTGGCAGTGACGCTACAGCGTAGAGCTCCG-TTCCTCCTACCCATGTCTGTGGTTGGGGCTGGGGC-AGTGCACAA------ATACGACGCTGACGAGGCCCAAGCATTGTTGGAAAAGAATTTAGCAGCTGCCAC-AGAATCTTGAATCCGTGGGTGAAGACCTTGACTTTCTTTGGCATCAATGTGGTCAAGAACAAAGTAAAATCATGACAAC-AAAAATTGTTCAGTTTTCCAAATATAAACTATTTTAAATACTTCACATTTATCCCCAAAGACTGACATAACTTAGAATAATTTTTATAGCAGCAAGGGTGAGAACTAAAACTTAAATTGTAAATACAA i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 383001 484 - 2125214 CATGCTAAAGAAGGTGGAAGAACAGTGACCCTAGTACAGGTTTATGGATCTTATCCATAATCTAAGGAAATGGAGGCCAAATGG--------------------CTTTTGAAACTCTAAAATACATGCAGTGGAA---GAGTCA-TGCTTCATGGGAGAACCAGACTCTTACAGGCAGTGAGGCTGCTCCGTGGAGCTCCA-TTCTTCCTACCCATGTCTGTGGTTGGGGATGGGATAAGTGCACAA------ATATGATGCTGATGAGGCCCAAGCATTGTAGGAAAAGAATTTAGCAGCTGCCACAGGAATCTTGAATCCACAGGTGAAAACCTTGACTTTCTTTGGGATCAGTGTGGTCAGGAACAAAGTAAAATCATGGCAAT-AAAAATTGTTCAGTTTTCCAAATATAAGCTCTTTCAAATACTCCAAATTTATCCTCAAAGATTGACATAACTTAGAATAATTTTTATGACAGCAAGGGTGAGAACTAAAACTTAAATTATAAATACAA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2092682 507 - 8137123 TACAATAAAGAGGAAGAAAGAACAGTGACCCAAGGATAGGTTTGTGGAGCATATA---GATCTAAAGGAATGGAGGCCAAAAGGTCTTCCTGAAATCTAGCAAATTTTAGAAACTCTGAAATGCATGCAGAAGAAAAGGAGTCACTACCTCAAGGAAGA-CTAGATTCTTA---GCAGTGAAGCCGCACCGCAGAGCTTCGCTCCCTCCTGCTTGTATCTGCCG-TGGGGCTGATGT-ATTGTGTGAGTGAATATGTGATACCAATGAAGTCCAAGCATTGTCAGAAAAAAATTTGGCAACTGGCTCAGAAATCTTGAATTTGTACATAGAGACCTTGACTTTCTTTGGACTAAACATGGCCAAGAACAAAGCAAAATGTTGGCAATAAAAAAATGTTCAGTTTTCTGAATGCAGGCTATTTTAAACACTCCAAATTTCTCCTGAAAGACTGAGATAATTTCAAATAATGTTTATAATAGCAAGAATGATAATTACAACTTAAATTATAAATACTA i otoGar3.GL873611 C 0 I 154 e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=8612.000000 s hg38.chr7_KI270899v1_alt 29959 10 + 190869 TTTTATTTAT s panTro5.chrUn_NW_015975002v1 12414 10 + 14113 TTTTATTTAT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57051 10 + 85365473 TTTTATTTAC i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 383485 10 - 2125214 TTTTATTTAT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2093343 10 - 8137123 TTTTATTTAT i otoGar3.GL873611 I 154 C 0 e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=187263.000000 s hg38.chr7_KI270899v1_alt 29969 192 + 190869 AAAAACAAAGTTAGCTTCAAATATTTTATGAACTAGTAGAATTTTAACCTTTTGTCACATTTCCCAGCAAAGTAAATAATT--------CTTTTTTTCACTTCTAGTCTGTCAGAAGAAAAGTCTTAGCTGAAATGGCCAGAAACTCTGAGGCACACTCCGGAGGCTGCTTCCGGGGCACCTCGGCACGG-CCGCTTTTCC s panTro5.chrUn_NW_015975002v1 12424 192 + 14113 AAAAACAAAGTTAGCTTCAAATATTTTATGAACTAGTAGAATTTTAACCTTTTGTAACATTTCCCAACAAAGTAAATAATT--------CTTTTTTTCACTTCTAGTCTGTCAGAAGAAAAGTCTTAGCTGAAATGGCCAGAAACTCTGACGCACACTCCGGAGGCTGCTTCCGGGGCACCTCGGCACGG-CCGCTTTTCC i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57061 192 + 85365473 AAAAACAAAGTTAGCTTCAAATATTTTATGAACTAGTAGAATTTTAACCTTTTGTCACATTTCCCAACAAAGTAAATAATT--------CTTTTTTTCATTTCTAGTCTGTCAGAAGAAAAGTCTTAGCTGAAATGGCCAGAAACTCTGAGGCACGCTCCGGAGGCTGCTTCCGGGGCACTTCGGCGTGG-CCACTTTTCC i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 709 200 + 9146 aaaaaAAAGGTTACCTTCAAATACTTTATGAGCTAGTAGAATTTCAACTTTTAGTCACATTTCCCAACAACGTAAATAATTCCTTTTTTTTTTTTTTCGTTTCTAGTCTGTCGGAAGAAAAGTCTTAGCTGAAATGGCCAGTAACTGTGACGTACTCTCCAGAAGCTGCATCTGGGGTATGTCAGCATGG-CTGTTTTTCC i calJac3.chrUn_GL286443 N 0 I 1 s cebCap1.NW_016107703v1 383495 198 - 2125214 -AAAAAGAAGTTAGCTTCAAATATTTTACGAACTAGTAAAATTTTAACTTTTTGTCACATTTCCCAACAAAGTAAATAATT-CTTTTTTTTTTTTTTAATTTCTAGTCTGTCAGAAGAAAAGTCCTAGCTGAAATGGCCAGAAACTGTGAGGTACTCTCCAGAAGCTGCATCCGGGGTACATCAGCATGG-CTGTTTTTCC i cebCap1.NW_016107703v1 C 0 I 37 s otoGar3.GL873611 2093353 186 - 8137123 GAAAACAAAATTAGCtttaaatattttat----taatagaattttaa-tttttGTCACATTTCCCAGCAAAATAAGTGCAT---------TTTTCTTCATTTGTATTCTGTCAGAAGAAAACTCTTGGCTGACTTGGTCA-AAACTGTAAGTTTTCCTGTGGGGTCTGTCTCCCAGCCACTTCGGCAGGGTCCACTTTCCC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=6366.000000 s hg38.chr7_KI270899v1_alt 30161 13 + 190869 -ATCCCGGCCCTCA s panTro5.chrUn_NW_015975002v1 12616 13 + 14113 -ATCCCGGCCCTCA i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57253 13 + 85365473 -GTCCTGGCCCTCA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 910 13 + 9146 -TCCTTGGCCCCTA i calJac3.chrUn_GL286443 I 1 C 0 s otoGar3.GL873611 2093539 14 - 8137123 TTCTCTGACTCTCA i otoGar3.GL873611 C 0 I 9 e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e cebCap1.NW_016107703v1 383693 37 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=12972.000000 s hg38.chr7_KI270899v1_alt 30174 27 + 190869 CTTGATGCGGTCCAGCAGGGTTGAAAT s panTro5.chrUn_NW_015975002v1 12629 27 + 14113 CTTGATGCGGTCCAGCAGGGTTGAAAT i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57266 27 + 85365473 CTTGACGCGGTCCAGCAGGGTTGAAAC i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 923 27 + 9146 TTTGATGTGGTCCATCAGGGTTGGAAT i calJac3.chrUn_GL286443 C 0 C 0 e otoGar3.GL873611 2093553 9 - 8137123 I e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e cebCap1.NW_016107703v1 383693 37 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=153966.000000 s hg38.chr7_KI270899v1_alt 30201 590 + 190869 tgtttgaaatgcttgttcccagtgcggtaaagaaatagcacttgaatgtaaatttaatttcctcagcaaggccattt---------------tttttttttaatttctgcagaaagtgtacactcgccagcagttttgccacaacagtatactgagcaaaggagacagggtcatttataacctgacgcatccaccctactgctgtgtccagtttccagtggctggaacgggacctcacattctgtatttgtcccgattggctagcaacttagaacttttttaaagaggaaaaggcagaggagaacaaaggaaggaggaagtaacttgtggaatgctgaaaaaagtaaaaacaccttcgaataaagaagaggaacaggcaatgacctaaagcttgcttggactagtataagcatgccagggcaaatatttaggctaaattgtgggagctaagaacataaagtacattgatttctttattagggctagcagatgtttaagaatgttagcacgggtctttgaataaattttgcttctaagagaagttactatttatttctaatgagatgggaaggaaagtctttgaagaggaaactctactttttaca s panTro5.chrUn_NW_015975002v1 12656 593 + 14113 tgtttgacatgcttgttcccagtgcggtaaagaaatagcacttgaatgtaaatttaatttcctcagcaaggccattt------------ttatttttttttaatttctgcagaaagggtacactcaccagcagttttgccacaagagtatactgagcaaaggagacagggtcatttataacctgacgcatccaccctactgctgtgtccagtttccagtggctggaacgggacctcacattctgtatttgtcccgattggctagcaacttagaacttttttagagaggaaaaggcagaggagaacaaaggaaggaggaagtaacttgtggaatgctgaaaaaagtaaaaacaccttcgaataaagaagaggaacaggcaatgacctaaagcttgcttggactagtataagcatgccagggcaaatatttaggctaaattgtgggagctaagaacataaagtacattgattcctttattagggctagcagatatttaagaatgttagcacaggtctttgaataaattttgcttctaagagaagttactatttatttctaatgagatgggaaggaaagtctttgaagaggaaactctactttttaca i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57293 601 + 85365473 tgt----aatgcttgttcccggtgccgtaaagaaatagcacttgaacgtaaatttaatttcctcagcaaggccttttttttttttttttttttttttttttactttctgcagaaagggtacactcgccagcagttttgccacaagagtaaaccgagcaaaggagacagggtcatttataacctgacgcgtccaccctactgctgtgtccgttttccagtggctggaatgggacctcacgttctgtatttgtcccgattggctagcaacttagaacttttttaaagaggacaaggcagaagagaacaaaggaaggaagaagtaacttgtggaatgctgaaaaaagtaaaaacaccttcagataaggaagaggaacaggcaatgacctaatgcttgcttggactggtataagcatgccagggcaaatatttaggctaaattgtgggagctaagaacataaggtacattgatttctttattagggctagcagatatttaagaatgttagcacaggtctttgaataaattttgcttctaagagaagttactatttatttctaatgagatgggaaggaaagtctttgaagaggaacctctactttttaca i nomLeu3.chr20 C 0 C 0 e otoGar3.GL873611 2093553 9 - 8137123 I e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e cebCap1.NW_016107703v1 383693 37 - 2125214 I e calJac3.chrUn_GL286443 950 0 + 9146 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=3820.000000 s hg38.chr7_KI270899v1_alt 30791 4 + 190869 GAAG s panTro5.chrUn_NW_015975002v1 13249 4 + 14113 GAAG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57894 4 + 85365473 GAAG i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 383730 4 - 2125214 GAAG i cebCap1.NW_016107703v1 I 37 C 0 s otoGar3.GL873611 2093562 4 - 8137123 GAAG i otoGar3.GL873611 I 9 C 0 e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e calJac3.chrUn_GL286443 950 0 + 9146 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=518566.000000 s hg38.chr7_KI270899v1_alt 30795 528 + 190869 TAGGAACTTAGACTTACAGTTTGCACATTGACAAACTTGTTTTCCTTCCGTACAC----GAGGGGTTTATGATCCTCTGTTGCAACTGATTTGTCTTATGTAACTTCAAGAGTTACTCGTCAACCTA----------CTTACTATTCTGGACTTTTCGGGAAATGGCAATTTGCCTTCCTATTTAGTGGGAGGGATACTGAGACTGCACTTTTTCTTACCCCAAGAAGTGCACAGTGTCATTGCAATGTCAACATCAGGGAGATCTCAGCCAGTGTGAAATAATTAGATCGTCCACTCAAAATTCTTAGTTACATCTTTTTAATATTTTCTTCACACTTCTTAAAAGCAGCTTAACAAGAATtgcattagtcagggttttccagagaaacagaaaagagaggaggagatgtccagaattgtctcgtgtgattacagagg-------------------------------------ctagaatccaaggaagagtggcttga-------------------gtccaggggcagaattccctcttcccctgggaggtcagtatttcttcctttaaggccttcaactgattggatgagac s panTro5.chrUn_NW_015975002v1 13253 528 + 14113 TAGGAACTTAGACTTACAGTTTGCACATTGACAAACTTGTTTTCCTTCCGTACAC----GAGGGGTTTATGATCCTCTGTTGCAACTGATTTGTCTTATGTAACTTCAAGAGTTACTCGTCAACCTA----------CTTACTATTCTGGACTTTTCGGGAAATGGCAATTTGCCTTCCTATTTAGTGGGAGGGATACTGAGACTGCACTTTTTCTTACCCCAAGAAGTGCACAGTGTCATTGCAATGTCAACATCAGGGAGATCTCAGCCAGTGTGAAATAATTAGATCATCCACTCAAAATTCTTAGTTACATCTTTTTAATATTTTCTTCACACTTCTTAAAAGCAGCTTAACAAGAATtgcattagtcagggttttccagagaaacagaaaagagaggaggagatgtccagaattgtctcgtgtgattacagagg-------------------------------------ctagaatccaaggaagagtggcttga-------------------gtccaggggcagaattccctcttcccctaggaggtcagtatttcttcctttaaggccttcaactgattggatgagac i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 57898 525 + 85365473 TAGGAACTTAGACTTACAGTTTGCACATTGACAAACTTGTTTTCCTTCCGTACAT----GAGGGGTTTATGATCCTCTGTTGCAACTGATTTGTCTTATGTAAACTCAAGAGTTACTGGTCAACCTA----------CTTAGTATTCTGGACTTTTTGGGAAATGGCAGTTTGCCTTCCTATTTAGTGGGAGGGATACGGAGACTGCACTTTTTCTTATCCCAAGAAGTGCACAGTGTCATTGCAATGTCACCATCAGGGAGATCTCAGCCAGTGTGAAATAATTAGATCGTCCACTCAAAATTCTTAGTTACATCTTTTTAATATTTTCTTCACAATTCTTGAAAGCAGCTTAACAAGAATtgcattagtcagggttttccagagaaacaaaaaagagaggaggagatgtccagaattgtctggtgtgattacagagg-------------------------------------ctagaaTCCAAGGAAGAGCGGCTT---------------------gtccaggggcagaattccctctt-ccctgggaggtcagtatttcttcctttaaggccttcaactgattggatgagac i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 950 528 + 9146 TAGGGACTTAGATTTATGGTTTGCACATTGGCAAACTTGTTTTCCTTCTGTATGT----TAGGGGTTTATGATCCTCTGTTGCAACTGATTTGTGTTACGTAAATTCAAGAGTTACTGGTCAACCAA----------TTTAGTATTCTGGATTTTTGAGGAAATAGTAATTTGCCTTCCTAATTAGTGAGAGGGATACTGTGACTGCACTTTTTCTTACTCCAAAAAGTACACAGTATCATTGCAATGCCAACATCAGGGAGATCTCAGTTAGTGCAAAATAATAATGTCACCCACTCAAAATTCTTGGTTATGTCTTTTTAATATTTTCTTCCCACTTCTTGAAAGCAGCTTAACAAGAATtgtattagtcagggttttccagagaaacagaagagagatgaggagatgtccaggattgtcttgtgtgagtaaacagg-------------------------------------ctagaatccaaggaagagtggctgac-------------------gtccagaggcagaattctttcttcccttggagggtcagtatatctttctttaacaccttcaactgattagatgaggc i calJac3.chrUn_GL286443 C 0 I 886 s cebCap1.NW_016107703v1 383734 506 - 2125214 TAGGAACTTAGATTTATGGTTTGCACATTGACAAACTTGTTTTCCTTCTGTATAT----GAGGGGTTTATGATCCTCTGTTGCAACTGATTTGTCGTATGTAAATTCAAGAGTTACTGATCAACCAA----------TTTAGTATTCTGGGCTTTTGAGGAAATGGTAATTTGCCTTCCTAATTAGTAAGAGGGATACTGAGACTGCACTTTTTCTTACTCCAAGAAGTACACAGTATCATTGCAATGCCAACATCAGGAAGATCTTGGTTAGTGCAAAATAATAATGTCACCGAC------------------TCTTTTTACTTTTTTCTTCACACGTCTTGAAAGCAGCTTAACAAGAATtgtattagtcagggttttccagagaaacag----gaGACGAGGAGATGTCCAGGAATGTCTCATGTGATTACAGagg-------------------------------------ctagaatccaaggaagagtggctgga-------------------gtccagaggcagaattctctcttcccttgggaggtcagtatatcttcctttaatgatatcaacagattggatgaggc i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2093566 571 - 8137123 CAGGGACTTAGA------GCTTGCCCGTTGACAAATGTCTTTTTCTTCAGTTCGTTGTGTAAGGGTTTATGATCCCTTGTTGCAATTGACTTGTCTCATGTAAATTAATGAATTA-TGGTTAACTAATAGCCATATTTTTAATATTCTGAACTTTTCAGGAAATGATAATTTTCCTTCCTAAAAAGTAGGAAGGATAGTGAGACTACGCTTTTTCTTATCCCAAGAAGTGCGTAGTATCTTTGCAATGCCAGGGCAAGGCAAATCTCAGCCAATATGAAATGACAAAATTACCCGTTCAAAATTCTTGATTATATTCACTTTGTATTTTCTTCACACTTCTTCAAAGAAGCTTAATAGGAATTGCCttagtccaggttctccagagaaacagaagagaaagggagagattttgaggattggcttgtgagattatggaagatggcaagtctcaggtctacagggcaggtcagctaaccagggacccagggaagagttggtggacccagctcagtctctagctatctattggcagaattccctctt--------------------tttttctgaaggtctccaattaattggatgaggc i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=72220.000000 s hg38.chr7_KI270899v1_alt 31323 66 + 190869 ccacccacattatggagcataatctgctttactaaaagtatactggcttaaatgctaatttcatct s panTro5.chrUn_NW_015975002v1 13781 66 + 14113 ccacccacattatggagcataatctgctttactaaaagtatactggcttaaatgctaatttcatct i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 58423 66 + 85365473 ccacccacactacggcacataacctgctttactaaaagtatgctggcttaaatgctaatttcatct i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 2364 66 + 9146 ctgcccacattatggagcatagtctgctttgctaaatatatactggtttaaatgctaatttcatct i calJac3.chrUn_GL286443 I 886 C 0 s cebCap1.NW_016107703v1 384240 66 - 2125214 tcacccacattatggagcataatctgctttgctaaatgtatactggcttaaatgctaatttaatct i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2094137 66 - 8137123 tcacccacactatggagagtaatctgctttactcaaactatgatggtttaaacattaattacatct i otoGar3.GL873611 C 0 I 47 e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=140991.000000 s hg38.chr7_KI270899v1_alt 31389 181 + 190869 gaaaaataccacagaataatg-ttgaccaagtactgggAGAGGCCTTTTCCTTCGTCTTTTGGTAAATTGCAATCCCTGGGTATATTCACATTTGAAACTCAAATGTGGGCATTGGCTACTGCAGGCCTTTCCCGGCTCAATGGAGTGCAGACAGGGGAGGCACAGGAGTGACTCCACTGTG s panTro5.chrUn_NW_015975002v1 13847 181 + 14113 gaaaaataccacagaataatg-ttgaccaagtactgggAGAGGCCTTTTCCTTCATCTTTTGGTAAACTGCAATCCCTGGGTATATTCACATTTGAAACTCAAATGTGGGCATTGGCTACTGCAGGCCTTTCCCGGCTCAATGGAGTGCAGACAGGGGAGGCACAGGAGTGACTCCACTGTG i panTro5.chrUn_NW_015975002v1 C 0 C 0 s nomLeu3.chr20 58489 181 + 85365473 gaaaaataccacagaataatg-ttgaccaagtactgggAGAGGCCTTTTCCTTCACCTTTTGGTAAATTGCAATCCCTGGGTATATTCACATTTGAAACTCACATGTGGGCATTGGCCACTGCAGGCCTTTCCCGGCTCAACGGAGTGCGGACAGGGGAGGGGCAGGAGTGATGCAACTGTG i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 2430 180 + 9146 gaaaaataccacagactaatgtttaaccaagtactgggAGAGGTCTTTTCATTCATCTTTTGGCAAATTGCAATCCCCGGG--TATTCACATTTAAAATTCAAATGTGGGCATTGGCCACAGCAGGCCTTCCCCTGCTCCATGGACTGCAGATGAGGGAGGCACAGGAGTGACTCTACTGTG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 384306 180 - 2125214 gaaaaatatcacagactaatgtttgaccaagtactgggAGAGGTCTTTTCATTCATCTTTTGGTAAATTGCAATCCCCGGG--TATTCACATTTAAAACTCAAATGTGGGTGTTGGCCACAGCAGGCCTTCCCCTGCTCCATGGAGTGCAGATGGGGTAGGCACAGGAGTGACTTTACTGTG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e canFam3.chr6 60956483 285 - 77573801 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=82789.000000 s hg38.chr7_KI270899v1_alt 31570 85 + 190869 TGAAGAGAAGACTGATGAG-------------------GGCCCATGTG--GCACCTCAGGTAGGGTCTGCACTGTCTGGACT-ATGGTCAGGCCCCTGCCTGAGCCA s panTro5.chrUn_NW_015975002v1 14028 85 + 14113 TGAAGAGAAGACTGATGAG-------------------GGCCCGTGTG--GCACCTCAGGTAGGGTCTGCACTGTCTGGACT-ATGGTCAGGCCCCTGCCTGAGCCA i panTro5.chrUn_NW_015975002v1 C 0 N 0 s nomLeu3.chr20 58670 85 + 85365473 TGAAGAGAAGACTGATGAG-------------------GGCCCATGTG--GCACCTCAGGTAGGCTCTGCACTGTCTGGACT-ACGGTCAGGCCCCTGCCTGAGCCA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 2610 85 + 9146 TGAAGAGAAGACTGATGAA-------------------GGTTCATGTG--ACACCTCAGGCAGGGTCTGCACTGTCCGGACT-GTGATCAGACCCCTGCCTCAGCCA i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 384486 85 - 2125214 TGAAAAGAAGACTGAAGAG-------------------GGCCCACATG--ACACCTCAGGCAGGGTCTGCACTGTCTGGACT-ATGATCAGGCCCCTGCCTGAGCCA i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60956768 107 - 77573801 TGAGGAGAAGATTGATGGGCTCATGCAGATCCCTGCTCAACCCATGAGCAGCCCCTTGGCCAGAGTCTGTATTGCCTGGACTCCCGGTCAGACTTCACTCCAAGCCA i canFam3.chr6 I 285 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=78313.000000 s hg38.chr7_KI270899v1_alt 31655 134 + 190869 -GCCCTGCTCTC-CAGTGTCCCCAAGGAAT---------------------CCCTGAAACTAGCATCTCATGGAGGAGATAGACGATGCAG--GAGGTCCCCTGTGCCCAGAACAAATGGTACAACAAGGCCCCTCTGTTCCCCAAACTGGTCTCAGCA s nomLeu3.chr20 58755 134 + 85365473 -GCCCTCCTCTC-CAGAGTCCCCAAGGAAT---------------------CCCTGAAACTAGCATCTCATGGAGGAGACAGATGACGCAG--GAGGTCCCCTGGGTCCAGAACAAATGGTACAACATGGCCCCTCTGTTCCCCAAACTGGTCTCAGCA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 2695 134 + 9146 -GCCCTGCTCTC-CCGTGTCCCCGATGAAT---------------------CCCTGAAACTAGCATCCCATGGAGGAGAGAGATGATGCAG--GAAGTCCCCTGAGCCCAGGACAAATGGCACAACATGGCCCCTCCCATTCCCAAACTGGTCTCAGTA i calJac3.chrUn_GL286443 C 0 I 2 s cebCap1.NW_016107703v1 384571 134 - 2125214 -GCCCTGCTCTC-CCATGTCCCCAAGGAAT---------------------CCCTGAAAGTAGCATCCCATGGAGGAGAGCGATGATGCAG--GAAGTCCCCTGGGCTCAGGATAAATGGTACAACATGGCCCCTCCCATCCCCAAACTGGTCTCAGCA i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60956875 159 - 77573801 GACCCTGCTTTCATTGTGTCACCCTGGGGTGTGTCATCCTGAGCCAGAATGCCCCTAAGCCAGCATCCCACAGAACATGTAGATGATGAGGCAGGGGTCTCCCAGGGCCAGAACAAATGACACAGTGGCACTGCTCTCCTCCCCAACCTGGTCTTAGCA i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=61640.000000 s hg38.chr7_KI270899v1_alt 31789 264 + 190869 AACTTTCCCCACAGCTTGGATCTGGGCAGGT----CACAGGGCCCAAACCTCATGACCAGCAGTGCTGGACCAGG-GGGCTAGAAGGGCAGGTGGAGCTCTCTGATGACATTGTGGAGAGGAGGGGTGCCAGGCAAGGGGTGTCCAGGCAGGGGGTGTCCAGGATACTGTCCTGAGAGCCTCTCCAGGGAC--AGATGCCCTT-AGGGGCAGAGAAAAA---GGCAACCGGGGAGACCAGAGGAGTCTG----ATGCAGATAAGGAGGGGCTCTGTCCA- s nomLeu3.chr20 58889 265 + 85365473 AACTTTCCCCACAGCTTGGATCTGGGCAGGT----CACAGGGCCCAAACCTCAGGACCAGCAGTACTGGACCAGGTGGGCTAGAAGGGAAGGCAGAGCTGTCTGACGACATTGTGGAGAGGAGGAGTGCCAGGCAAGGGGTGTCCAGGCAAGGGGTGTCCAGGATGCTGTCCTGAGAGCCTCTCCAGGGAC--AGGCGCCCTT-AGGGGCAGAGAAAAA---GGCAACAGGGGAGACCAGAGGAGTCTG----ATGCAGATAAGGAGGGGCTCTGTCCA- i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 384705 241 - 2125214 AACTTTCCCCAAAGCCTGGAT----------------CAGGGCCCAAACCTCAGGATCAGCAGTGAGGGACCAGCCGGGCTAGAAGGGCAGGCAAAGCTGCCTGAAGACATTGTGGAAATGAGGGATGTCAGGCAA---------------GGGGTGTCCAGGATGCTGTCCTGAGAGCCTCTCCAGGGAC--AGGTGCCCTT-AGGGGCAGAGAAAAAGGCGGCAGCAGGGGAGACTGGAGGAGTCTG----ATACAGATGAAGAGGGGCTGTGTCCA- i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60957034 228 - 77573801 AATTTCTCAAGCACCCTGGATGTGGGTGGGCAGCAAGCAGGGCCCAAACATCAGAGCCA------CATGACATGT----GTGGAAGGGCAGGGAGCACTGACTGAGGACTTTGAGCTTAACAAGGTTATCCTACAT----------------------------TGCAGTCCTGAGAGATTCTCCAAGGGTCAGGACACTCTTGAGAAGCAGAGAGAAA--------CAGGAGAGA------GTGTTTACCCTGTGCAGAAGTGGAAGGGCCTCACCTTG i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e calJac3.chrUn_GL286443 2829 2 + 9146 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=32494.000000 s hg38.chr7_KI270899v1_alt 32053 79 + 190869 GTGATGTTTCTCCACAATGAGCTCTCCCGAGGACAAGCAGCCTGCTTTATAGGCGAACCCCATTGCACAGTGAGAAGAC- s nomLeu3.chr20 59154 79 + 85365473 GTGATGTTTCTCCGCAATGAGCTCTCCCAAGGGCATGCAGCCTGCTTTATAGGCAAACCCCATTGCACAGTGAGAAGAC- i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 2831 79 + 9146 GTGATGTTTCTCCACAATGATCTCTCCCTGGGGTTTGCAGTCTGCTTTACAGGCAAATCTCACTACACAGAGAGAAGAC- i calJac3.chrUn_GL286443 I 2 I 175 s cebCap1.NW_016107703v1 384946 79 - 2125214 GTGATGTTTCTCCACAATGATCTCTCCCTGGGGTGTGCAGTCTGCTTTACAGGCGAATCTCACTGCACAGAGAGAAGAC- i cebCap1.NW_016107703v1 C 0 I 206 s canFam3.chr6 60957262 38 - 77573801 GTGATGTGATCCCAT------------------------------------------TTTCAAGATACAGGGAAGAAACT i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=602.000000 s hg38.chr7_KI270899v1_alt 32132 3 + 190869 GAA s nomLeu3.chr20 59233 3 + 85365473 GAA i nomLeu3.chr20 C 0 C 0 s canFam3.chr6 60957300 3 - 77573801 GAG i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e cebCap1.NW_016107703v1 385025 206 - 2125214 I e calJac3.chrUn_GL286443 2910 175 + 9146 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=2364.000000 s hg38.chr7_KI270899v1_alt 32135 8 + 190869 GACTTCGG s nomLeu3.chr20 59236 8 + 85365473 GCCTTCGG i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 3085 8 + 9146 GGCTTCAA i calJac3.chrUn_GL286443 I 175 C 0 s canFam3.chr6 60957303 8 - 77573801 GCTTTCAG i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e cebCap1.NW_016107703v1 385025 206 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=68294.000000 s hg38.chr7_KI270899v1_alt 32143 180 + 190869 AACTCAGTTCCCTAGAACCTCTTCTCT--CCCTGCATAGTCCAGCCCTATTGGTCCTTTCTGGTCTTGAAGGTCTTTAATGGAAACAAACCGCAAGGCCAAGGCCAGACCTGCCTGCC-CTTCATGCCCATCTCCACGCAGCAGTTGAGTGTGGACTCTGCCTCCCCTGTCCCCCGAACAGTG s nomLeu3.chr20 59244 179 + 85365473 AACTCAGTTCCCTAGAACCTCTTCTCT--CCCTGCGTAGTCCGGCCCCATTGGTCCCTTCTAGTCTTGAAAGTCTTTATTGGAAACAAACCACAAGGCCAAGGCCAGACCTGCCTGCC-CTTCATGCCCACCCCTGCGCAGCAG-CGAGTGTGGACTCTGCCTCCCCAGTCCCCCGAACAGTG i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 3093 171 + 9146 ATCTCAGTTCCCTAGAAGCTCTTCTCT--CCCTGCATAGGCCAGCCCTGTGGGTCCCTTCTGGTCTTTAATGTATTTCTTGGAAACAAACCACAAGGTAAAGGCCGGATCTGCCTGCCCCCTCATGCCCACCCCTGGGCAGTAG-AGAGTGTGGA--CTGCCTCCCATGCCCCC-------TG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 385231 179 - 2125214 AACTCAGTTTCCTAGAAGCTTTTCTCT--CCCTGCATAGGCCAGCCCTGTGGGTCCCTTCTGGTCTTTAAGGTCTTTCTTGGAAACAAACCACAAGGCCAAGGCCAGATCTGCCTGCCTCCTCATGCCCACCCCTGGGCAGTAG-AGAGTGTGGACTCTGCTTCCCATGCCCCT-GACCAGTG i cebCap1.NW_016107703v1 I 206 C 0 s canFam3.chr6 60957311 142 - 77573801 AACTAGCTGCTCCTGAAGCACCTCTCTCACCTTGCATGCCCCGGGCCCATGG------------------------------------CCTGCAATGGCATTGCCTAGCGAGCCTGTGAGCTC-TGCC---CCCAGCACCGCAG-CAAAGGAGAAGAAGGCCAAGAGGTTTCTCTGGGCAGGG i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2094203 47 - 8137123 I e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=31018.000000 s hg38.chr7_KI270899v1_alt 32323 51 + 190869 AGTCCCCACCAGCCCCTCCAGGGACACAGTGCCA-GCTCTGCAGCCCTCCCA s nomLeu3.chr20 59423 51 + 85365473 AGTCCCCACCAGCCCCTCCAGGGACATAGTGCCA-GCTCTGCAGTCCTCCCA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 3264 48 + 9146 AGAT----TCAGCCCCTCTGGGGACACAGTGCCAGGCTGTTCAGCCCTCCCA i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 385410 52 - 2125214 AGTCTTCATCAGCCCCTATGGGGACACAGTGCCAGGCTGTGCAGCCCTCCCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2094250 52 - 8137123 AGCCCCCGTCAGCCCCTCCAAGGACATAGGGGCATGCCACACTGCCCTCTCG i otoGar3.GL873611 I 47 C 0 s canFam3.chr6 60957453 42 - 77573801 ---CCCCACTGGCCCCTTC-TGGACTCAGTGCCA-----TACTGCCCTGCC- i canFam3.chr6 C 0 C 0 e chlSab2.chr28 4175 0 - 21531802 C e manLeu1.NW_012101810v1 20611 5 - 2515279 I e cerAty1.NW_012002954v1 16863848 0 - 21915920 C e macNem1.NW_012019910v1 4274904 0 - 9440265 C e macFas5.chr3 33513127 0 + 192294377 C e rheMac8.chr3 33897163 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=1113524.000000 s hg38.chr7_KI270899v1_alt 32374 254 + 190869 TCCCTCTGTCCATTCTTCTGC-AGGCAGGATGGGCACTGTGGCTGGAGGAAGGCTCCTGATCCACTGCTTTGGGGGAA---TCTGATTTAGCACTCTACAGGGAACCCAACAGAGATCCAAAGCTGAGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGGGCCTCAGGGAGGACAGATAATTATCTAAAGTTGACAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGG s nomLeu3.chr20 59474 256 + 85365473 TCCCTCTGTCCATTCTTCTGC-AGGCAGGATGGGCACCGTGGCTGGAGGAAGGCTCCTGATCCACTGCTTTGCGGGAA-TCTCTGATTTAGCGCTCCACAGGAAACCCAACAGAGATCCAAAGCTGAGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGGGCCTCAGGCAGGACAGGTAATTATCTAAAGTTGACAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897163 255 + 185818997 TCCCTCTGTCCATTTTCCTGC-AGGCAGGGTGGACACTGTGACTGGAGGAAGGTTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCCGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33513127 255 + 192294377 TCCCTCTGTCCATTCTCCTGC-AGGCAGGGTGGACACTGTGACTGGAGGAAGGTTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCCGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4274904 254 - 9440265 TCCCTCTGTCCATTCCCCTGC-AGGCAGGGTGGACACTGTGACTGGAGGAAGGTTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTT-CGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16863848 255 - 21915920 TCCCTCTGTCCATTCTCCTGC-AGGCAGGGTGGACACTGTGACTGGAGGAAGGCTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGGAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 4175 255 - 21531802 TCCCTCTGTCCATTCTCCTGC-AGGCAGGGTGGACACTGTGGCTGGAGGAAGGCTCCTGATCCACTGCTTTGGGGAGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCTGAGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 20616 255 - 2515279 TCCCTCTGTCCATTCTCCTGC-AGGCAGGGTGGACACTGTGACTGGAGGAAGGCTCCTGATCCACTGCTTTGGGGGGAATCTCTGATTTAG-ACTCCACAGGGAACCCAACAGAGATCCAAAGCC-AGTACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTACCTAAAGTTGACAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCTCCTTTGAAGG i manLeu1.NW_012101810v1 I 5 C 0 s calJac3.chrUn_GL286443 3312 253 + 9146 TCCCTCTGCCCTTTCTTCTGC-AGGCAGGATGGACAC--TGGCTGGAGGAAGGCTCCTGGTCTGCTGCTTTGGGGGAA-TCTCTGACTTAGCACTCCACAGGGAACCCAACAGATATCCAAAGCT-GAGACTGATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGAGGACAGATAATTTTCTAAAGTTGGCAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCCCCTTTGAAGG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 385462 253 - 2125214 TCCCTCTGTCCTTTCTTCTGC-AGGCAGGATGGACAC--TGGCTGGAGGAAGCCTCCTGGTCCACTGCTTTGGGGGAA-TCTCTGACTTAGCACTCCACAGAGAACCCAGCAGAAATCCAAAGCT-GAGACTCATTCAGAGAAAGAACATTTCTGCTAAGCTTAGTGCCTCAGGGGGGACAGATAATTGTCTAAAGTTGGCAGAACAATCAGTTTTCTGGGTCTGAAGTTTACAAACAAAATCCCTCCCCTTTGAAGG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2094302 236 - 8137123 ------------TCCTTCTGCAAGGCAGGATGGACACTGCTGCTGGACACAGGCTCCTGATCCACTCCTTCAGGATAG---TCTGCATTAG--CTTCACACGGGACCAGGCAGA-ATGCGAAGCTGAGCCCTGACTCAGAGAAAGAACA-CTCTGCTAAGTTTAGTGCTGCGGGGAGGACAGATAATTATCGCACA--GGCAGCGCAATCAATTTTCTGTGTGTGAAGTTTACAAACAAAATCTCTCT-TTGTGAAGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60957495 185 - 77573801 --------TCAAGTCCTGTGT--------------------------------------GTCCACC--------AGAGGCTCCTGGCTTCGCTATGCACATGGCATCCAGCACAGGCGCACAGCTGAATGGGGCTCCAGAGGAACAGCATTC-------------TGCTTCAGGGAGGACAGATAATTATCTGATGCTGGAAGAACAATCAATTTTCTGGGTCTGAAGTTTACAAACAGA------CTCTTTTGAGGG i canFam3.chr6 C 0 I 11 e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=689253.000000 s hg38.chr7_KI270899v1_alt 32628 171 + 190869 CAGATTAGCCATGGAAACACCTTCTACATT-GCCTGCCTAAATGGTTTGTCTCTGCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCGTAATTGTTTCTTGTCTCAGAGAAATCTTACAGGGAGGCTGTCTCCAGATAACCAGCAGCCTGGGCTCCAGG------------C----- s nomLeu3.chr20 59730 183 + 85365473 CAGATTAGCCATGGAAACACCTTCTACATT-GCCTGCGTAAATGGTTTGTCTCTGCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGCTTCTTGTCTCAGAGAAACCTTACGGGGAGCCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGGCTGGGTTGTTTCC----- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897418 170 + 185818997 CAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------C----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33513382 170 + 192294377 CAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------C----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4275158 170 - 9440265 CAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------C----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16864103 170 - 21915920 CAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTTAAAACAGAATTAGGATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------C----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 4430 170 - 21531802 CAGATTAG-CGTGGAAACACCTTCTGCATT-GCCCGCGTCAATGGTCTGTCTCTGCAATCAATCTCTCTACTCTTTAAAACAGAATTAGAATAATTTGCATAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------C----- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 20871 170 - 2515279 CAGATTAG-CGTGGAAACACCTTCTGCATT-GCCTGCGTCAATGGTCTGTCTCTTCAATCAATCTCTCTATTCTTCAAAACAGAATTAGGATAATTTGCGTAATTGTTTCTTGTCTCAGAGAAATCTTACGGGGAGGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------C----- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 3565 167 + 9146 CAGATTAGCAATGGAAACA---CCTTCATT-GCCTATGTAAATGGTTTGTCTCTGCAGTCAATTTCTCTATTCTTTAAAACAGAAATAGGATAAATTGCATAATTGTTTCTTATCTCAGAGAAATCTCACTGGGAGGCTGTTTTCAGATAACCAG-AGCCTAGGCTCCAGG------------C----- i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 385715 171 - 2125214 CAGGTTAGCAATGGAAACATCTTCTTCATT-GCCTATATAAATGGTTTGTCTCTGCAGTCAATTTCCCTATTCTTTAAAACAGAAATAGGATAAATTGCATAATTGCTTCTTGTCTCAGAGAAATCTCACTGGGAAGCTGTCTTCAGATAACCAGCAGCCTGGGCTCCAGG------------C----- i cebCap1.NW_016107703v1 C 0 I 17 s otoGar3.GL873611 2094538 154 - 8137123 CAGATTAGCATTGGAAACACCTTCTACATCAGTCTGTATAAATGGTTTGTCTCTGCAATTCATCTCTCTA---TTTACAACA---------------GCATAAATGTTTCTTGTCTC--AGAAATCTGAGCGGGATGTTGTCTTCAGGTAACT---AGCCCGGGCTCCAGC------------TTGCGC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=-5823.000000 s hg38.chr7_KI270899v1_alt 32799 2 + 190869 -----------------------------CG------- s nomLeu3.chr20 59913 2 + 85365473 -----------------------------TG------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897588 2 + 185818997 -----------------------------TG------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33513552 2 + 192294377 -----------------------------TG------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4275328 2 - 9440265 -----------------------------TG------- i macNem1.NW_012019910v1 C 0 I 6 s cerAty1.NW_012002954v1 16864273 2 - 21915920 -----------------------------TG------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 4600 2 - 21531802 -----------------------------TG------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 21041 2 - 2515279 -----------------------------TG------- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 3732 2 + 9146 -----------------------------TG------- i calJac3.chrUn_GL286443 C 0 I 12 s otoGar3.GL873611 2094692 38 - 8137123 CAGCAGAGGGAAAGTCACGATGAAAGAGCTGATTTCAG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e cebCap1.NW_016107703v1 385886 17 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=2055.000000 s hg38.chr7_KI270899v1_alt 32801 3 + 190869 ACA s nomLeu3.chr20 59915 3 + 85365473 AGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897590 2 + 185818997 -AG i rheMac8.chr3 C 0 I 4 s macFas5.chr3 33513554 2 + 192294377 -GG i macFas5.chr3 C 0 I 4 s cerAty1.NW_012002954v1 16864275 2 - 21915920 -GG i cerAty1.NW_012002954v1 C 0 I 4 s chlSab2.chr28 4602 2 - 21531802 -GA i chlSab2.chr28 C 0 I 4 s manLeu1.NW_012101810v1 21043 2 - 2515279 -GG i manLeu1.NW_012101810v1 C 0 I 4 s calJac3.chrUn_GL286443 3746 3 + 9146 AGG i calJac3.chrUn_GL286443 I 12 C 0 s otoGar3.GL873611 2094730 3 - 8137123 AGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e macNem1.NW_012019910v1 4275330 6 - 9440265 I e cebCap1.NW_016107703v1 385886 17 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=3874.000000 s hg38.chr7_KI270899v1_alt 32804 5 + 190869 CCAAA s nomLeu3.chr20 59918 5 + 85365473 CCAAA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 3749 5 + 9146 CCAAA i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 385903 5 - 2125214 CCAAA i cebCap1.NW_016107703v1 I 17 C 0 s otoGar3.GL873611 2094733 5 - 8137123 ACAAA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 4604 4 - 21531802 I e manLeu1.NW_012101810v1 21045 4 - 2515279 I e cerAty1.NW_012002954v1 16864277 4 - 21915920 I e macNem1.NW_012019910v1 4275330 6 - 9440265 I e macFas5.chr3 33513556 4 + 192294377 I e rheMac8.chr3 33897592 4 + 185818997 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=4400851.000000 s hg38.chr7_KI270899v1_alt 32809 1264 + 190869 CCCACAGGCAGCCTTGTGGTAag---------------------------gctccaggctctagagccaaagg-atctaggtcagaggctcCA----CCTGGGGCTCCTGCGCCCTCCCTGCCAGGGCGGCAGAGGGAGCCACATCCCTGAAAGCCTCTGGCTTAGGGACCTCAGAATTCCCACCTCTGATAAGGTAATGAAATGAGCCAAAGTTGATAAAAATCTGTGAACAAACTGGCCTACAGTGGCTAAAACCAGAGGGAGAAAAATAATGTGATAAACCCCC-AAACCAGCCATCCTGGGAAG-----TTTCAAGGG----GCT--GCTGTGCTCCTGACT---------------CCTCCCCCGCCTCCTGGAGCTGCCCAGGTGAGCAGACAGAGTTTTG----AGAGCTG-----------------------------GCGCTGAG----------------GCTCTGTGCCTGGAGAC--AGACACTGGGCAGGGACCCTCAACTTTCCTGTCCGTTTTG---CGCA--GTGAG--TCAGAAACAG--ATGCTGGGGAGCAGCAAGCAAGCAGAGGGCTGCCTGTCTCAGAGGCAGGAGCATCCACCTCAGAGGA-TGCCAGGTGGGGAGATCCTGGACTGTGCCACCCCCAGGG------AGGGCACAGGCACAGCAGGCCTCTCAGCAGGAGCTCGGGGGTGGAGTAGAGACCAGGGATTCCATAAGACTCCCCACTGCTCCCCATTCCCTAAGGTGCAGCAAAACGTCTCCGCTTCTATGAGGAC--AGTCCAGACGTCCCCAGCTTCCCCTAGAGCAGACAGAAGGCCTGAGGCCCTGGGAAACC-CACGTGCCCACTGGAAGTGGGGAGTAAAAAGACAGAAGGGACCCGTCTGGAAACAAAACCAGTCAAGAACCAGACTCACCACTGCTTCAGAAAATATGGGGAAAT-----GTGAGCGTGAATTTCATAAAGCACAGTCAGCAAGCCACGAGGAGGGCCAGCGTCTGATGGACAGGGAGACTGCAGACCCCAGGAAGCAGCAGGAGAACAAGGATT-CCCTCTATGATTTCCCACGGCTGATGCTCCCGACCTGGTTTCCCTTCACTGGTGCTCCTCCTGTGTTCCACACTGGATACTATCCTGCCAATCCACGCCCCTTGCTGGCCTTCAGTGAggtggaact-caccacactctggcctctttctccacttctcttgctactgtccatttgcaaagatctcagatggctgcaccatgtgttctgacc--agagaaagactgcaaccacctttgc------------------aaagcttatgacagcgagggaggt--------cacgcatgactgactccaccttacctctagcctca-----caggcaggctgtcctgctcatgcttggg s nomLeu3.chr20 59923 1225 + 85365473 CCCAGAGGCAGCCTTGC-ATAag---------------------------gctccaggctctacagccaaagg-ctctaggtcagaggctcCG----CCTGGGGCTCCTGCACCCTCCCTGCCAGGGCGGCAGTGGGAGCCACATCCATGAAAACCTCTGGCTTAGGGACCTCAGAATTCCCACCTCTGATAAGTCAATGAAATGAGCCAAAGTTGGTAAAAATCTGTGAACAAACGGGCCTACAGTGGCTAAAACCAGAGGGAGAAAAATAATGTGATAAACCCCCAAAACCAGCCATCCTGGGAAG-----TTTC--GGG----GCT--GCTGCGCTCCTGACT---------------CCTCCCCCGCCTCCTGGAGCTGCCCAGGTGAGCAGACAGAGTTTTG----AGAGCTG-----------------------------GTACTGAG----------------ACTCTGTGCCTGGAGAC--GGACACTGGGCAGGAACCCTCAACTTTCCTGTCCTTTTTG---CGCA--GTGAG--TCAGAAACAG--ATTCTGGGG------AAGCAAGCAGAGGGCTGCCTGTCTCAGAGGCAGGAG-------CCCCGAGGA-TGCCAGGTGGGGAGATCCT-GCCTGTGCCACCCCCAGGG------AGGGCACAGGCACAGCAGGCCTCTCAGCAGGAGCTCGGGGGTGGAGCAGAGACCAGGGATTCCGTAAAACTTCCCACTGCTCCCCGTTCCCTAAGGCGCAGCAAAACGTCTCCGCTTCCGTGAGGAG--AGTCCAGACGTCCCCAGCTTCCCCTAGAGCAGACAGAAGGCCTGAGGCCCTGGGAAACC-CACGTGCCCGCTGGAAGTGGGGAGTAAAAAAACAGAAGGGACCCGTCTGGAAACAAAACGAGTCAAGAACCAGACTCACCACTGCTTCAGAAAATATGGGA--------------------------AAAGCACAGTCAGCAAGCCACGAGGAGGGCCAGCGTCTGACGGACAGGGAGACTGCAGACCCCAGGAAGCGGTGGGAGAACACGGATT---CTCTATGATTTCACATGGCTGATGCTCCCGCCCGGGTTCCCCTTCGCTGATGCTCCTCCTGTGCTCCACACTGGACACGATCCTGCCAAGCCACGCCCCCTGCTGGCCGTCAGTGAGGTGGGACC-CACCACACTCTGGCCTCTTTCTCCACCCCTCTTGCTGCTGTCCATTTGCAAAGATCTCAGATGGCTGCACCATGTGTTCTGACC--AGAGGGAGACtgcaaccacctttgc------------------aaagcttatgacagcgaggggagt--------cacgcatgactgactccaccttgcctccagcctca-----caggcgggctgtcctgctcacgcttggg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33897596 1242 + 185818997 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCATATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCTCCCCTCTGATAAGTTAATGAAATGAGCCGAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAAG-----TTTCAGGGG----GCT--GCTGCACTCCTGGCT---------------CCTCCCCCGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTG---C-CA----GAG--TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGACGCAGGAG-------CCCCGAGGAGGGCCAGGTGGGGAGATCTCAGCCTGGGCCACCCCCAGGG------AGG-----------------CTCTCAGCAGGGGCTCGGGGGTGGAGTAGAGACCAGGGATTCCAT--GACTCCCCACTGCTCCCCATTCCCTAAGGTGCAGCAAAACATCTCAGCTTCTGTGAGGAG--AGTCTGGACAT-CCCAGCCTCCCCTAGAGCAGACAGAACACCTGAGGCCCTGGGAAA-C-CACGTGCCCGCTGGAAGTGGGGAGCAAAAAGACAGAAGGGAACCATCTGGAAACAAAACCAGTCCAGAACCAGACTCACCACTGCTTCAGAAAACACGGGAAACC-----GTGAGTGTGAGTTTCATAAAGCACAGTCAGCAAGCCACGAGGAGGGACAGTTTCTGAGGGACAGGGAGACGGCAGACCCAAGGAGGCAGCGGGAGAACAAGGATT-CCCTCCATGATTTCACACGGCTGATGCTCCCGACCTGGTTTCCCTTCGCCGGGGCTCCTCCTGTGTTCCACACTGGACACCATCCTGCCAAGCCACGCCCTCCGCCGGCCTTCAGTGAggtgggact-ctccacactccggtctttttctccacccctcttgctactgtccattggcaaagatctccgatggctgcaccatgcgttctgaccagAGAGAGAGACtgcagccacctctgc------------------aaagcttaggacttcaagggaagtgactcctccatgggtgactgactccaccttgcctgtagcctca-----caggtgggctgttgtgctcatgcctggg i rheMac8.chr3 I 4 C 0 s macFas5.chr3 33513560 1242 + 192294377 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCTCCCCTCTGATAAGTTAATGAAATGAGCCGAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAAG-----TTTCAGGGG----GCT--GCTGCACTCCTGGCT---------------CCTCCCCCGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGATCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTG---C-CA----GAG--TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGACGCAGGAG-------CCCCGAGGAGGGCCAGGTGGGGAGATCTCAGCCTGGGCCACCCCCAGGG------AGG-----------------CTCTCAGCAGGGGCTCGGGGGTGGAGTAGAGACCAGGGATTCCAT--GACTCCCCACTGCTCCCCATTCCCTAAGGTGCAGCAAAACATCTCAGCTTCTGTGAGGAG--AGTCTGGACAT-CCCAGCCTCCCCTAGAGCAGACAGAACACCTGAGGCCCTGGGAAA-C-CACGTGCCCGCTGGAAGTGGGGAGCAAAAAGACAGAAGGGAACCATCTGGAAACAAAACCAGTCCAGAACCAGACTCACCACTGCTTCAGAAAACACGGGAAACC-----GTGAGTGTGAGTTTCATAAAGCACAGTCAGCAAGCCACGAGGAGGGACAGTTTCTGAGGGACAGGGAGACGGCAGACCCAAGGAGGCAGCGGGAGAACAAGGATT-CCCTCCATGATTTCACACGGCTGATGCTCCCGACCTGGTTTCCCTTCGCCGGGGCTCCTCCTGTGTTCCACACTGGACACCATCCTGCCAAGCCACGCCCTCCGCCGGCCTTCAGTGAGGTGGGACT-CTCCACACTCCGGTCTTTTTCTCCACCCCTCTTGCTACTGTCCATTGGCAAAGATCTCCGATGGCTGCACCATGCGTTCTGACCAGAGAGAGAGACtgcagccacctctgc------------------aaagcttaggacttcaagggaagtgactcctccatgggtgactgactccaccttgcctgtagcctca-----caggtgggctgtcgtgctcatgcctggg i macFas5.chr3 I 4 C 0 s macNem1.NW_012019910v1 4275336 1241 - 9440265 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCCCCCCTCTGATAAGTTAATGAAATGAGCCAAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAAG-----TTTCAGGGG----GCT--GCTGCACTCCTGGCT---------------CCTCCCCCGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTG---C-CA----GAG--TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGACGCAGGAG-------CCCCGAGGAGGGCCAGGTGGGGAGATCTCAGCCTGGGCCACCCCCAGGG------AGG-----------------CTCTCAGCAGGGGCTCGGGGGTGGAGTAGAGACCAGGGATTCCAT--GACTCCCCACTGCTCCCCATTCCCTAAGGTGCAGCAAAACATCTCAGCTTCTGTGAGGAG--AGTCTGGACAT-CCCAGCCTCCCCTACAGCAGACAGAACACCTGAGGCCCTGGGAAA-C-CACGTGCCCGCTGGAAGTGGGGAGCAAAAAGACAGAAGGGAACCATCTGGAAACAAAACCAGTCCAGAACCAGACTCACCACTGCTTCAGAAAACACGGGAAACC-----GTGAGTGTGAGTTTCATAAAGCACAGTCAGCAAGCCACGAGGAGGGACAGTTTCTGAGGGACAGGGAGACGGCAGACCCAAGGAGGCAGCAGGAGAACAAGGATT-CCCTCCATGATTTCACACGGCTGATGCTCCCGACCTGGTTTCCCTTCGCC-GGGCTCCTCCTGTGTTCCACACTGGACACCATCCTGCCAAGCCATGCCCTCCGCCGGCCTTCAGTGAggtgggact-ctccacactccggtctttttctccacccctcttgctactgtccattggcaaagatctccgatggctgcaccatgcgttctgaccagAGAGAGAGACtgcagccacctctgc------------------aaagcttaggacttcaagggaagtgactcctccatgggtgactgactccaccttgcctgtagcctca-----caggtgggctgtcgtgctcatgcctggg i macNem1.NW_012019910v1 I 6 C 0 s cerAty1.NW_012002954v1 16864281 1242 - 21915920 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCCCCCCTCTGATAAGTTAATGAAATGAGCCGAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAAG-----TTTCAGAGG----GCT--GCTGCACTCCTGGCT---------------CCTCGCCCGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTG---C-CA----GAG--TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGACGCAGGAG-------CCCCGAGGAGGGCCAGGTGGGGAGATCTCGGCCTGGGCCACCCCCAGGG------AGG-----------------CTCTCAGCAGGGGCTCGGGGGTGGAGTAGAGACCAGGGATTCCAT--GACTCCCCACTGCTCCCCATTCCCTAAGGTGCAGCAAAACATCTCAGCTTCTGTGAGGAG--AGTCCGGACGT-CCCAGCCTCCCCTAGAGCAGACAGAACACCTGAGGCCCTGGGAAA-C-CACGTGCCCGCTGGAAGTGGGGAGCAAAAAGACAGAAGGGAACCATCTGGAAACAAAACCAGTCCAGAAACAGACTCACCACTGCTTCAGAAAACACGGGAAACC-----GTGAGTGTGAGTTTCATAAAGCACAGTCAGCAAGCCACGAGGAGGGACAGTTTCTGAGGGACAGGGAGACGGCAGACCCAAGGAGGCAGCGGGAGAACAAGGATT-CCCTCCATGATTTCACATGGCTGATGCTCCCGACCTGGTTTCCCTTCGCCGGGGCTCCTCCTGTGTTCCACACTGGACACCATCCTGCCAAGCCACGCCCTCCGCCAGCCTTCAGTGAggtgggact-ctccacactccggtctttttctccacccctcttgctactgtccattggcaaagatctccgatggctgcaccatgcgttctgaccagAGAGAGAGACtgcagccacctctgc------------------aaagcttaggactgcgagggaagtgtctcctccaagggtgactgactccaccttgcctgtagcctca-----caggtgggctgtcgtgctcatgcctggg i cerAty1.NW_012002954v1 I 4 C 0 s chlSab2.chr28 4608 1239 - 21531802 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGACTCCTGGGCCCTCCCTGCCAGGGTCGCAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTCCCCCCTCTGATAAGTTAATGAAACGAGCC---GTTGGTAAAACTCTGTGAACAAACTGGTCTACAGTGGCTAAAACTGGAGTGAGAAAACTAATGTGATAACCCCCA-AAACCAGCTACCCTGGGAAG-----TTTCAGGGC----GCT--GCTGCACTCCTGGCT---------------CCTCCCCCGCCTACTGCAGCTGCCCAGGTGAGGAAATGGAACTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--ACACACTGGACGGGGACCCTCAACTTTCCTGTCCTTTTTG---C-CA----GAG--TTGGAAAC----ATGCTGGGGAACAGCAGACAAGCAGAGGATTGTCTGTCTCAGATGCAGGAG-------CCCCGAGGAGGGCCAGATGGGGAGATTCCGGCCTGGGCCACCCCCAGGG------AGG-----------------CTCTCAGCAGGGGCTCAGGGGTGGAGTAGAGACCAGGGATTCCAT--GACTCCCCACTGCTCCCCATTCCCTAAGGTGCAGCAAAACATCTCAGCTTCTGTGAGGAG--AGTCTGGACAT-CCCAGCCTCCCCTAGAGCAGACAGAACACCTGAGGCCCTGGGAAA-C-CTCGTGCCTGCTGGAAGTGGGGAGCAAAAAGACAGAAGGGAACCATCTGGAAACAAAACCAGTCCAGAATCAGACTCACCAGTGCTTCAGAAAACACGGGAAACC-----GTGAGTGTGAGTTTCATAAAGCACAGTCAGCAAGCCACGAGGAGGGACAGCGTCTGAGGGACAGGGAGACAGTAGACCCAAGAAGGCAGCGGGAGAACAAGGATT-CCCTCCATGATTTCACACGGCTGATGCTCCCGACCTGGTTTCCCTTCGCCGGGGCTCCTCCTGTGTTCCACACTGGACACCATCCTGCCAAGCCATGCCCTCCACCGGCCTTCAGTGAGGTGGGACT-CTCCACACTCCAGTCTTTTTCTCCACCCCTCTTGCTACTGTCCATTGGCAAAGATCTCTGATGGCTGCACCATGCGTTCTGACCAGAGAGAGAGACtgcagccacctctgc------------------aaagcttacgactgcgagggaagtgactcctccatgggtgactgactccaccttgcctgaagcctca-----caggtgggctgtcctgctcatgcctggg i chlSab2.chr28 I 4 C 0 s manLeu1.NW_012101810v1 21049 1242 - 2515279 TTCGCAGGCAGCCTTGCAGCGAG---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCTTAGGTCAGAGGCTCCA----CCTGGGGCTCCTGGGCCCTCCCTGCCAGGGCCACAGTGGGAGCCACATCCATGAAAGCCTCTGGTTTAGGGACCTCAGAATTTCCCCCTCTGATAAGTTAATGAAATGAGCCGAAGTTGGTAAAACTCTGTGAACAAACTGGCCTACAGTGGCTAAAACTGGAGGGAGAAAACTAATGTGATAACCCCCA-AAACCAGCCACCCTGGGAAG-----TTTCAGGGG----GCT--GCTGCACTCCTGGCT---------------CCTCCCCTGCCTCCTGCAGCTGCCCAGGTGAGCAAATGGAGCTTTG----AGAGCTG-----------------------------GTGCTGAG----------------ACTCTGTGCCTGGAGAC--AGACACTGGACGGGAACCCTCAACTTTCCTGTCCTTTTTG---C-CA----GAG--TTGGAAAC----ATGCTGGGGAACAGCGGGCAAGCAGAGGATTGTCTGTCTCAGAGGCAGGAG-------CCCCGAGGAGGGCCAGGTGGGGAGATCTCGGCCTGGGCCACCCCCAGGG------AGG-----------------CTCTCAGCAGGGGCTCGGGGGTGGAGTAGAGACCAGGGATTCCAT--GACTCCCCACTGCTCCCCATTCCCTAAGGTGCAGCAAAACATCTCAGCTTCTGTGAGGAG--AGTCCGGACAT-CCCAGCCTCCCCTAGAGCAGACAGAACACCTGAGGCCCTGGGAAA-C-CACGTGCCCGCTGGAAGTGGGGAGGAAAAAGACAGAAGGGAACCATCTGGAAACAAAACCAGTCCAGAACCAGACTCACCACTGCTTCAGAAAACACGGGAAACC-----GTGAGTGTGAGTTTCATAAAGCACAGTCAGCAAGCCACGAGGAGGGACAGTTTCTGAGGGACAGGGAGACGGCAGACCCAAGGAGGCAGCGGGAGAACAAGGATT-CCCTCCATGATTTCACACGGCTGATGCTCCCGACCTGGTTTCCCTTCGCCGGGGCTCCTCCTGTGTTCCACACTGGACACCATCCTGCCAAGCCACGCCCTCTGCCGGCCTTCAGTGAggtgggact-ctccacactctggtctttttctccatccctcttgctactgtccattggcaaagatctccgatggctgcatcatgcgttctgaccagAGAGAGAGACtgcagccacctctgc------------------aaagcttaggactgcgagggaagtgactcctccatgggtgactgactccaccttgcctgtagcctca-----cgggtgggctgtcgtgctcatgcctggg i manLeu1.NW_012101810v1 I 4 C 0 s calJac3.chrUn_GL286443 3754 1150 + 9146 CCCACAGGCAGCCTTGCAGTGAA---------------------------GCTCCAGGCTCTAGAGCCAAAGG-CCCTAGATCAGAGCCTCCA----CCTGGGGCTCCTGCGCCCTCCCTGCCAGCCTGGCAGTGGGAGCCATGTCCATAAAAGCCTCTGGATTAGGGATCTCAGAACTCCCACCTCTGATAAGTTAATGCAATGAACCAAAGTTGGTAAAAATCTGTGAACAAACTGGCCTACCGTGGCGAAAACCAGAAGGAGAAAACTAACATGATAAACCTCAAAAACCAGCCATCCTGGGAAGTAAGATTACAAGGG----GCT--GCTGTGCTCCTGACT---------------CCTCCCCTGCCTCCTGGAGCTCCCCAGGTGAGCAGA--------------------------------------------------GTCTTTAG----------------GCTCTGTACCTGGAAAG--ATACACTGGGCGGGCACCCTCAACTTTCCTGTCCTTTTTG---CACA--GTGAG--TCAGAAACAG--ATGCTAGGGAGCAGCCAGCAATCAAAGGACTGTCTGTCTCAGATGCACAAA-------CTCCAGGGATGCCCAGATGGGGAAAGCCTGGACTGTGCCAACCCCAGGG------AGGGCACAGGCACAGCAGGCCCCTCAGTAGGAGCTCAGGGGTGGAGTAGAGACCAGGGATCCCATAAGACTCCTCACTGCTCCCCATTCCCTAAGGCAGAGCAAAATGTCTCAGCTTCTATGAGGAG--AGTCCAGACATCCCCAGCTTCCCCTAGAGCAGACAGACCACCTGAGGCCCTGGGAAA-C-C---------CATGAAGTGGGGAATAAAAAGGCAGAAGGGACCCATCTGGAAACAAAACTGGTCAAAAACCAGACTCACCACTGCTTCAGAAAATAC--GAAAAT-----GTGAGCATGAATTTCATAAAGTACAGTCAACAAGGCACAAGGACAGACAGCATCTGATGGACAGGGAGACTGCAGACCCAAGGAAGCAGCAGAAGAACCAGGACC-CCCTCTATGATTTCA-------------------------------------------------------------------------------------CCCTCTGGCCTTCAGTGAGGTGGAACT-CACCACGCTCTGATCTCTTTCTCCACCCTTCTTGCTATTGTCTATTTGCAAACATCTCAGATGGCAGCACCATGTGTTCTGACC--AGAGAGAGACtgcaaccacctttgc------------------aaagtttatgacagagagagaagt--------cgaccatggctgactccaccttgcctctagcctca-----caagcaggctgtcctgctcatgcttggg i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 385908 1240 - 2125214 CCCACAGGCAGCCTTGCAGTGAA---------------------------GCTCCAGTCTCTTGAGCCAAAGG-CCCTAGATCAAAGCCTCCA----CCTGGGGCTCCTGTGCCCTCCCTGCCAGCGTGGCAGTGGGAGCCACATCCCTGAAAGCCTCTGGATTAGGGACCTCAGAACTCCCACCTCTGATGAGTTAATGAAATGAACCAAAGTTGGCAAAAATCTGTGAACAAACTGACCTACAGTGGCTAAAATCAGAAGGAGAAAACTAACATGATAAACCTCAAAAACCAGCCATCCTGGGAAGTAAGGTGACAAGGG----GCT--GCTGTGCTCCTGAGT---------------CCTCCCCCACCTCCTGGAGCTCCCCAGGTGAGCAGACAGAGT--------------------------------------------CTTTTTAG----------------ACTCTGTACCTGGAAAG--AGACACTGGGTGGGCACCCTCAACTTTCCTGTCCTTTTTG---CACA--GTGAG--TCAGAAACAG--ATGCTAGGGAGCAGCCAGCAAGCAAAGGACTGTCTGTCTCAGATGCAGAAG-------CTCCAGGGATGCCCAGGTGGGGAAAGCCTGGACTGTGCCACCCCCAGGG------AGGGCACAGGCACAGCAGGCCCCTCAGCAGCAGCTCGGGGGTGGAGTAGAGACCAGGGATCCCATAAGATTCCTCACTGCTCCCCATTCCCTAAGGCACAGCAAAATGTCTCAGCTTCTATGAGGAG--AGTCCAGACATCCCCAGCTTCCCCTAGAGCAGGCAGACTGCCTAAGGCCCTGGGAAA-C-C---------CAGGAAATGGGGAATAAAAAGACAGAAAGGACCCATCTGGAAACAAAACTGGTCAAGAACCAGACTCACCACTGCTTCAGAAAATAT--GAAAAT-----GTGAGCATGAATTTCATAAAGCACAGTCAGCAAGACATAAGGACAGACAACGTCTGATGGACAGGGAGATCGCAGACCCAAGGAAGCAGCAGGAGAACCAGGAGC-CCCTCTATGATTTCACGCAGCAGATGCTCCCAACCTGGTTTCCCATCACTGGTGTTCCTCCT-TGTTCCACACTGGATACTATCCTGCTGAGCCATGTGCCCCTCTGGCCTTCAGTGAGGGGGAACT-CACCACGCTCTGGTCTCTTCCTCCACCCTTCTTGCTACTGTCCATTTGCAAACATCTCAGATGGCGGCACCCTGTGTTCTGACC--AGAGAGAGGCtgcaatcacctttgc------------------aaagtttatgacagagagagaagt--------caaccatggctgactctaccttgcctctagcctca-----caagcaggctgtcctgctcatgcttggg i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2094738 1255 - 8137123 CCAACAGGCAGCCATG--GTGAGTGGAGCAACCCAGGGGCCGCCTCAGCAGCTCCAGGTCCTAGAGCTGCAGGCCCCTTTGTCAGAGGAGTCACCTCCCTGAGGCTCTGCGAACCTCTCTACCATGTCCA---TGAAAGCTCCTT-------AGCCTCTGTCTTGGGAACCTCTGAATCCCTACCT-TGATAAGTTAATAAAATGAGCCAAAGATGGCAAAAATCAGTGAAAAAACCGGCCTGTGTTAGCGAAAGTAAGAAGGGGAAAGCTAATGTGATGGACTTCT--AACTGCAAGTCCTATAAAGTAAGATTAAAGAGAAAACACTgggcagcacctgtggctcaaaggagtagggcgccggtcccatatcctggaggtggcaggtt---caaacccagccccggccaaaaactgcaaaaaaaAAAAAAGGAGAAAACCCTGCCCTGCCAGGCTCCTATTCCTCCCCTGCTCAGTGCCCAGAGACAGAGAAACTGGGTACGCA-CCTCAACTTTTACTTCCTTTATGGATC-CAGGGTGAGTTTTGGAAGCAGGAACCTTGGAGAAC---CAGTGAAAGGAGAGCCGCCTGCCTCAGAAGTGGGCT-----------------GCTCTGGTGGGGAAAG-------------ACCTCTAGGGCCAGTCAGG------------------CCACAGCAGGCCCTAAGTGGGGAGGCAGAGCCCGAGGATTCTTCAGGACTCTCCACACTTTCCCATGGCCCAAGGTGCAGAAAAATGTTTCAGCTTCTGAGAGGAGAAAGTCCAGAAGTCTCTAGGCCAACCTGGAGCTGACAGA-CGCCTAAGGGCCTGCGAAA-CACACACACCATCTGCAAGAGTT---------------AGGGGGTTATCTAGAAACAAAACCAGTCAAGGATCAGA-TCACCATTGCTTC-GCTCACACAGAAAAACAAGATATGAGCTTGAATTTCATAAAACAGAGTCTTAAAGCTGCAAAGA----CGGCATCTGATAGAAAGGGAGAGGAAAGCTTTAAGGAAGCAATGAGAGAACCAGCATTGTCCGCAAAGAT----------------------------------------------------------ACCCTGGGCACTGGCCTGCTGAGCCATGCCCACCCCTGGCCTTTGGGTAGGAGGTTCTGCAtcagattctattctccttccccaacctgcttactactgtttatt-actgagacctcacatagctgctccctgtagcctgccc--agAGACAG--TGTAG-CACCTTTGCTCCATCTTGCTAGATTATAAAGCCTAT--CTTCAggctgggcg-------ca---gtggct--------catgcctgtaattctaacactccaggaggctgaggtgcttaagcttagg i otoGar3.GL873611 C 0 I 316 e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=94991.000000 s hg38.chr7_KI270899v1_alt 34073 27 + 190869 cacaggctaaactaatccggggagaaa s nomLeu3.chr20 61148 27 + 85365473 cataggctaaactgatccggggagaaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33898838 27 + 185818997 cagaggctaagctaatctggggagaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33514802 27 + 192294377 cagaggctaagctaatctggggagaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4276577 27 - 9440265 cagaggctaagctaatctggggagaaa i macNem1.NW_012019910v1 C 0 I 75 s cerAty1.NW_012002954v1 16865523 27 - 21915920 cagaggctaagctaatctggggagaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 5847 27 - 21531802 cagaggctaagctaatctggggagaaa i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 22291 27 - 2515279 aagaggctaagctaatctggggagaaa i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 4904 27 + 9146 cataggctaagctgacctggggagaaa i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 387148 27 - 2125214 cgtaggcttacctgacctggggagaaa i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2095993 316 - 8137123 I e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=23256.000000 s hg38.chr7_KI270899v1_alt 34100 7 + 190869 tttagtt s nomLeu3.chr20 61175 7 + 85365473 tttagtt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33898865 7 + 185818997 tttagtt i rheMac8.chr3 C 0 I 67 s macFas5.chr3 33514829 7 + 192294377 tttagtt i macFas5.chr3 C 0 I 18 s cerAty1.NW_012002954v1 16865550 7 - 21915920 tttagtt i cerAty1.NW_012002954v1 C 0 I 67 s chlSab2.chr28 5874 7 - 21531802 tttagtt i chlSab2.chr28 C 0 I 66 s manLeu1.NW_012101810v1 22318 7 - 2515279 tttagtt i manLeu1.NW_012101810v1 C 0 I 67 s calJac3.chrUn_GL286443 4931 7 + 9146 tttagtt i calJac3.chrUn_GL286443 C 0 I 1 s cebCap1.NW_016107703v1 387175 7 - 2125214 tttagtt i cebCap1.NW_016107703v1 C 0 I 1 e otoGar3.GL873611 2095993 316 - 8137123 I e canFam3.chr6 60957680 11 - 77573801 I e macNem1.NW_012019910v1 4276604 75 - 9440265 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=30531.000000 s hg38.chr7_KI270899v1_alt 34107 49 + 190869 -----------------ataaaacaatactagtccctctctaaaactaaagccctccttccttgag s nomLeu3.chr20 61182 48 + 85365473 -----------------acagaacaacaatagtccctc-ctaaaactaaagccctccttccttggg i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33514854 49 + 192294377 -----------------caagaacaatgatagcccctccctaacactaaagcgctccttgcttggg i macFas5.chr3 I 18 C 0 s calJac3.chrUn_GL286443 4939 66 + 9146 atagtttaacttggaagcaaggacaataatagtccctccctaaaactaaagctctccttgcttgga i calJac3.chrUn_GL286443 I 1 C 0 s cebCap1.NW_016107703v1 387183 66 - 2125214 atagtttaacttggaagcgaggacaatcatagtccctccctaaaactaaagctctccttgcttgga i cebCap1.NW_016107703v1 I 1 C 0 e otoGar3.GL873611 2095993 316 - 8137123 I e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 5881 66 - 21531802 I e manLeu1.NW_012101810v1 22325 67 - 2515279 I e cerAty1.NW_012002954v1 16865557 67 - 21915920 I e macNem1.NW_012019910v1 4276604 75 - 9440265 I e rheMac8.chr3 33898872 67 + 185818997 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=258747.000000 s hg38.chr7_KI270899v1_alt 34156 590 + 190869 gaccaaaaacgaatgaaaggccacgtgattaggatttcgggaggagcccgaactctgctaaaatgtagacatagtttccgtaattccttattgttcagaagtcatatggctagaagtcacacaatttgtgacttctccaattgcttctgtagataacaacactattgtagagcctgagtttggttttttcagctgttttccagatttttgcattctgccaaccgactgaccctacccagacccatggctcatgactcaactggtcctatgcactcccacctccccacccagaggcagactccgtgacaggatcgttttctacaccctatgactgcatccctaaacaatcaaccgcacccactccctggtcctctgcccaccaaacaatccttgaaaaacccaaacctcccgttcttctgggagactgatttgagtagcagctccttctcccacgtggctagctgcatcaattaaactgtttctttagtgcagtaccacagtctcggtgaattggttttgtctg-tacagtgggtgggaagaacccattgggcaactgcaagacagttcagcgtgcttgctcatcgtactgg s nomLeu3.chr20 61230 586 + 85365473 gaccaaaaacgaatgaaaggccacgtgattaggacttcgggaggagccagaactctgctaaaatgtagacatagtttccataattccttattgttcagaagtcatatgactagaagtcacacaatttgtgcctcctccaactgcttctgtagataacatcactattgtagggcctgagattggtcttttcagctgttttccagatttttgcattctgccaaccgactgaccctacccagacccatggctcatgactcaactggtcctaggcactcccacctccccatccagaggcagactcagtgagaggatcgtttcgtgcaccctatgattgcatccctaaccaatcaacagcacccactccctggtcctctgcccaccaaataatccttgaaaaacccaaccctcccattcttctgggagactgatttgagtagcagctcctcctcccacgtg----gctgcatcaattaaaccgcttctttagtgcagtaccacagtctcggcgaactggctttgtctg-tacagtgggtgggaagaacccatcgggcaactgcaAGACAGTTCAGCATGCTTACTCATCACCCTGG i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 5005 570 + 9146 aactgaaaactaat-aaaggccacatgattaggattttgggaggagcctgaactctgctaaaatgtagatttagtttctataatcccttactgctcaggagacatgtggctagaagtcacacaatttgtgccttctttaatttatcctagagatagcatcactgttgcagaatgtgagattgttc-----------ttttcagatttttgcactctgcccactgactgaccctacccagacccgtggttcatgactcaactggtcctgtgcagtcccacctccccatccagaggcagattcagtga-------gttttgtacatcctatgattgcatccctaaccaatcaacagcacccactccctagtcccctgcccattaaataatccttgaaaaaccctcacctcccattcttctgggagactgatttgagtaatagctccttctgccatgtggctagctgaat-aattaaactctttctttagtacaataccacagtctcagtgaactggtttcatctg-tgcagtgggcaggaagaattcattgggcaactgcaAGACAGTTCAGCATGCTTGCTCGTCTTACTGG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 387249 583 - 2125214 aactgaaacctaat-aaaggccacaagattaggattttgggaggagcctgagctctgctaaaatgtagatttagtttctataatcccttactgctcaggagtcatgtggctagaagtcacacaatttgtgccttctccaatttgtcctatagatagcatcactgttgtagaacctgagattgttcttttcagccgtttttcagatttttgcattctgcccactgattgaccctacccagacccatggctcatgactcaactggtcctgtgcactcccaccttcccatccagaggcagattcagtga-------gttttgtacaccctatgattgcatccctaaccagtcaacagcacccactccctagtcacctgcccaccaaataatccttgaaaaaccctcaccttgcattgttctgggagactgatttgagtaatagctccttctcccacatggctagctgcgtcaattaaactctttctttagtgtgataccacagtttcagtgaactggtttcatctgttgcagtgggcaggaagaactcattgggcaactgcaAGACCGTTCAGCATGCTTGCTTGTCTTACTGG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2095993 316 - 8137123 I e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 5881 66 - 21531802 I e manLeu1.NW_012101810v1 22325 67 - 2515279 I e cerAty1.NW_012002954v1 16865557 67 - 21915920 I e macNem1.NW_012019910v1 4276604 75 - 9440265 I e macFas5.chr3 33514903 0 + 192294377 C e rheMac8.chr3 33898872 67 + 185818997 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=288364.000000 s hg38.chr7_KI270899v1_alt 34746 525 + 190869 aaataaaacctatttgtAGGGTCAAAGGGGCAAAGTTGTCCCATGTTATTCCCTTTTGGGGAGTTATCTGTTGGGTGTTTCTAGCCTGCTGCAAGCTAGGATAAAGCAGAGGTCCTCGTGCCTCTCCTCCAGGACCCCATACAAACACCTTGTCCTCCATGAAGAACCCGGGACCTGCAGCCCTCCTCTCCTGTG-------ACCTTCCCAGTCACTTCATCCTCATCTCGGGGTGCTGCCAGCTGAATGTGC---TGTGCTCACTGGCTGCACCACTACCCCCGTGCACACACACTCCTGCAGATGAGAGCTGCCAAGGCAGAGAGTGAACTTTTCTGA--TTTGACATTCCCTGTACATTTGTGCCTTGACACGCCACACAAATACAGTGTGCAGACACC------------AGTAAAAACAGAGAAAAGGTGGGGACATAAA---GGCCCAGACGT-AAGAGTGGGCAAGGGTGCCCTCTGGTTC--ATTTCACTCTGCAGTCGACTCCCAAGGTGAACCTAGTGAATTCTGCCTCAGAAGCCCTGGTTTCC s nomLeu3.chr20 61816 525 + 85365473 AAATAAAACCTACTCGTAGGATCAAAGGGGCAAAGTTGTCCCATGTTATTCCCTTTTGGGGAGTTATCTGTTGGGTGTTTCTAGCCTGCTGCAAACTAGGATAAAGCAGAGGTCCTCGTGCGTCTCCTCCAGGACCTCATGCAAACACCCTGTCCTCCCTGAAGAACCCTGGACCTGCAGCCCTCCTCTCCTGTG-------ACCTTGACAGTCACTTCATCCTCATCTCAGGGTGCTGCAAGCTGAATGTGC---TGTGTTCACTTGCTGCACCACTGCCCCCATGCACACACACTCCTGCAGATGAGAGGCACCAAGGCAGAGACTGAACTTTTCTGA--TTTGACGTTCCCTGCAGGTTCGTGCCTTGACACGCCACACAAATACAGTGTGCAGACACC------------AGTAAAAACAGAGACAGGGTGGGGACATAAA---GGCCCAGACGT-AAGAGTGGGTGAGAGTGCACTCTGGTTC--ATTTCACTCTGCAGTTGACTCCCAAGGTGAACCTAGTGAATTCTGCCTCAGAAGCCCTGGTTTCT i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 5575 516 + 9146 AAATAAAACCTATTTGCAGGGCCAAAGGGGAAAAGTTATCCCATGTCATTCCCTTTTGGAGAATTATCTGTTGGGTGCTTTTAGCCTGTTGCAAGCTAGAATAAAG--------CTTGTGCCTCTCCTCCAGGACCCCATGCAAATACCTCATCCTCCATGAAGAACCCTGGACCTGCAGCCCTCCTTTTCTGTG-------ACCTTCCCAGTCATTTCATCCTCATCTCAGGGTACTGCAAGCTGAATGTGC---TATTTTCACTTACTGCAACCCCACCCCAATGCACACACCCTCATGCAGATGAGAGCCACCAAGGCAGAG--TGAACTTTTCTGA-TTTTGATGTTCCCTATAGGTTTGTGCCTTGACACTCTAAGCAAATACAGTGTGCAGACACC------------AGTAAAAACAAAGAAAGGGTGTGGACAGAAA---GGCCCAGACCT-AAGAGTGGTTGAGGGTGCCCTGTGGTTC--ATTTCACTCTGCAGCTGACTCCCATGGTAAACCTGGTGAATTCTACCTCAGAAGGCCTGGTTTCC i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 387832 509 - 2125214 AAATAAAACCTATTTGCAGGGCCAAAGGGGAAAAGTTATCCCATGTCATTTCCTTTTGGGAAATTATCTGTTGGGTGCTCTTAGCCTGCAGGGGTC------------------CTCGTGCCTCTCCTCCAGGACCCCATGCAAACACCTCGTCCTCCACGAAGAATCCTGGACCTGCAGCCCTCCTTTCCTGTG-------ACCTTCCCAGTCACTTCATCCTCATCTCAGGGTGCTGCAAGCTGAATGTGCTATTATTTTCACTTATTGCACTCCCACCCCGATGCACACACACTCATGCAGATGACAGCCACAAAGACAGAG--TGAACTTTTCTGA-TTTTGATGTTCCCTATAGGTTTGTGCCTTGACACTCTAAACAAATACAGTGTGCAGACACC------------AGTAAAAACAGAGAAAAGGTGGGGACAGAAA---GGCCCAGACCT-AAGAGTGGGTGAGGGTGCCCTGTGGTTC--ATTTCACTCTGCAGCTGACTCCCAAGGTAAACCTGGCGAATTCTGCCTCAGAAGGCCTGGCTTCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2096309 496 - 8137123 aaataaatCCTGTCTGCAGAGGCAGAGGGGAGAGGCTA--CCATGTCATCCTCTCTTTGGGAGTGATCTGTTGGGTGTTCCTAGTCTGCCACAAACTAGGATAAGGCAGAGGC-CCTGTACCTTTCTGTCTGGATGCC---------------------TAAGGGCTTCCTGACCTCCTGCCCTCCTCACCCGTGACCCACAACCCTCTCTGT-ACTCTATCCTCATCTTAGGGT-------GTAGAACATGC---TCTTTTCACT-ATTGTGTCCCC-CACACATCCACACAGA-----GCAGATGACAGCTACTAAGGCAGAT--GGAAAATTTCTGATTTTTGATGTCCCTTTAGGGGTT----CTTG----------CACACAAAATATGTAGACACAAACTAATTGATGAGTAAAAACAAATGAAGGGTGAGGATGTAACAGTGACCCAGACCTAAAAAGTGGGTGAGGGTGCTGTG-GACTCAGATTTTACTCTGTAGCCCACGTGCAAGCTGGACGTGACAGACTTCTTTTCAGAAGCCCTGGTTTTC i otoGar3.GL873611 I 316 I 1317 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 5881 66 - 21531802 I e manLeu1.NW_012101810v1 22325 67 - 2515279 I e cerAty1.NW_012002954v1 16865557 67 - 21915920 I e macNem1.NW_012019910v1 4276604 75 - 9440265 I e macFas5.chr3 33514903 0 + 192294377 C e rheMac8.chr3 33898872 67 + 185818997 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=349154.000000 s hg38.chr7_KI270899v1_alt 35271 657 + 190869 TTGTCTCTGACACTGAATCCACAGTAG-CCATGATCCACGTTTATTGGATCACCAGTATTTTGAGGAATGTTAGT-ATCATTCTA-CAAAAAATATTTTaaaaattgatttctataatcaggaaatttcaggaaaccctgagtaaaaatgattgattattgcaaaacttctctgaagctttcacaaacaaatgtgtgctcatctccaaggcgaaagtaaagtagggaacctgccccaaatttatGAG-TCAGTTCAGTGCTTTTCTGTGATCAAATCGGTGTTCTGTCAAGTGCAATGTGGAAAAGGTAATACTGAGGGTCATTTAACT-GGCATGTCCAGCGCAGTGCGGAAAAGGGAACATTCCAGGGTCATCTACTCGGCA-GCCTCCAAAGGCTGGCAC-AGTGTATCTTACTTCTCTTCTGCGTTTCTAGCGCCTTCATTAGACCTGAGACGTGGAAATGGCCTAGGAGATCTTATTAACAGTGACGTAGGAATAGGAGTAATTAATTATGTTACAGTAATAGTTGGGTTTTGCATGTTCTAAGCTGGGCTCAGGAAAAGGCCAATAGAAAGGGGCAAATATGGAGTATTTCCTGGTCTTAAGACGCGGGCAGCATGGAGCAGCCAGC-TG---AGAGTCAAAGGTGGCCAGGGAGTATTTGC s nomLeu3.chr20 62341 653 + 85365473 TTGTCTCTGACACTGAATCCACAGTAG-CCATGATCCACGTTTAGTGGATTACCAGTATTTTGAGGAATGTTAGT-ATCATTCTA-CAAAAAGTATTTTAAAAATTGTTttctataatcaggaaatttcaggaaaccctgagtaacaatgattgattattgcaaaacttctctgaagctttcccaaccaaatgtgtgctcatctccaaggtgaaaataaagtagggaacctgccccaaatttatGAG-TCAGTTCAGCGGTTTTCAGTGATCAAATTGGTGTTCTGTCAAGTGCAATGTGGAAAAGGTCATACCGAGGGTGATTTAACT-GGCATGTCCAGCGCAGTGCGGAAAAGGGAACACTCCAGGGTCATTTACTCGGCA-GCCTCCAAAGGCTGGCAC-AGTGCATCTTACTTCTCCTCTGCGTTTCCAGCGCCTTCATTAGGCCTGAGACCTGGAAAAGGCCTAGGAGATCTTATTAACAGTGACATAGGGATAGGAG----TAATTATGTTACAGTAATAGTTGGGTTTTGCATATTCTAAGCTTGACTCAGGCAAAGGCCAATAGAAATGGGCAAATATGGACTATTTCCTGGTCTTAAGACCCGGGCAACATGGAGCAGCCGGC-TG---AGAGTCAAAGGTGGCCAGGGAGTATTTGC i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 6091 645 + 9146 TTGTCTCTGACACTGAATCCACAGTAG-CCATGATCCACGTTCAGTGAATCACCAGTATTTTGAGGAATGTTAGT-ATCATTATA-CAAAAACTATTTTTTTAATTGTTttctataatcagggaatttcaggaaaccctgagtaaaaatgacagattattgcaaaacttctgtgaagctttcacaaacaaaggtgtgtgaatctccaaggtgaaagttaggtggggcaggctccccaaatgtattagatcaGTTCAAAGCTTTTCAGTGATCAAATTGGTGTTCTGTCCAGTGAAATATGGAAAAGGTCATACCCAGGGTCATTTAACTGGGCATGTCCAGTGCCGTGTGGAAAAGGTAGCATTCCAGGGTCATTTACTCAGCA-GCCTCCACAGGCTGGCAC-AGTGTATCTTACTTCTCTTCTGTGTTTCTAGCATCTTCCTTAGGCCTGAGACTTGGGAAAGGCCCAGGAGATCTTATTAAGAGTGAGGTAGGA----------------ATGTTACAGTAATAGTTGGGTTTGGCATATTCTAAGCTTGATTCAGGCAAGGGCCAATAGAAAGGGGCAGATATGGAGTATTTCCTGATCTCAAGACCTGGGCAGCATGAAGCAGCCAGC-AGGGCAGAGTCAAAGGTGTCCAGGGAGTA-TTGC i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 388341 643 - 2125214 TTGTCTCTGACACTGAATCCACAGTAG-CCATGATCCACATTCAGCGGACCACCAGTATTTTGAGGAATGTTAGT-ATCATTCTA-CAAAAACTATTTTTTAAATTGTTTTCTATAATCAGGGAGTTTCAGGAAACCCTGAGTAAAAATGATGAAATATTGCAAAACTTCTGTGAAGCTTTCACAAACAAATGTGTGTAAATCTCCAAGGTGAAAGTTAGGTGGAGAGCCTGCCCCAAATGTATTAGGTCAGTTCAGTGCTTTTCAGTGATCAAATTGGTGTTCTGTCCAGTGAAATATGGAAGAGATCATACCCAGGGTCATTCAACTGGGCATGTCCAGTGCGGTGTGGAAAAGGTAGCATTCCAGCGTCATTTACTTGGCA-GCCTCCACAGGCTGGCAC-AGTGTATCTTACTTCTTTTCTGTGTTTCTAGCATCTTCCTTAGGCCTGAGAGCTAGGAAAGGCCCAGGAGATCCTATTAAAAGTGAAGTAGGA----------------ATGTTACAATAATAGTTGGGTTTGGCATATTCTAAGCTTGACTCAGGCAAGGGCCAATAGAAAGGGGCAGATATGGAGTATTTCCTGGTCTCAAGGACTAGACAGCATGAAGCAGCCAGC-TA---AGAGTCAAAGGTGGCCAGGAAGCATTTGC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2098122 543 - 8137123 TTGTCTCTGACACTAAGCCCACAGTAGTCCATGGT-------------------AGTAttttgaggaatgctaataattgttctatttaaaattaaaaaaaaaattg-------taatcaggaaagcttgtgaaaccctgggtaaagaggatttattactgcaaaaattttctgagtctttcc--------tgtgcatgaatctccaaggtg-gggtaaagtaggatggctgcccc--atttatttg-tcagctgaactcttttctgtggagcaGCCAGTGTTCTATCCAGGGCCCTCTGG---------------------------------------------------AAAGGTAATGTCCCAGGGTC-CTTCCACAGCACACCTCTAAAGGCAGGCACAAACACATCTCATCT---TTCTGTGTTTCCAGCACCTAGGACAGGTCTGAGACTTG-----------------CTTGTTACCTGCGAGGTAGGAATGGGAGAAATGAATTCAGTTACACAAAGAGTTGGATTTGGCACCTTCCACACTTGACTCAG-----GACTGAAAGAGAGGAGTAACTTGGGGATATTTCCTGGTCTTGAGACCTGGGCAGTAAAGAGAAGCCAGCTTG---AGAGTCTAGGGGTGTC-------ATTTGT i otoGar3.GL873611 I 1317 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 5881 66 - 21531802 I e manLeu1.NW_012101810v1 22325 67 - 2515279 I e cerAty1.NW_012002954v1 16865557 67 - 21915920 I e macNem1.NW_012019910v1 4276604 75 - 9440265 I e macFas5.chr3 33514903 0 + 192294377 C e rheMac8.chr3 33898872 67 + 185818997 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=2389140.000000 s hg38.chr7_KI270899v1_alt 35928 667 + 190869 CCCCGGATGCCTGCACTGGGAATG-GAGAGGTCAGTGTCCTGTCCATCGCATGCCCAGGCATAAGGAAAT----GGGGCATAAAGCTGGTCATCCCCACC-----AAAACCAGGGGAGACTTAATGGTCCTGAGGCTAAGTTTTGAGAA-GTTCAGCAAATGGCAGACGTGGTAGGATTTCCCCCACAGGCTTCACCTGGATGCACTCCTGTATCCCTGAGGGCATTCCATAGTAAACTGTTGTAAAGGAG-CAGACAGGGAGATGCAGAGCCTAGTGTGGTGGGATGGGTGATGGGGCGAGGTGTCCCCAACCTGAACAAGGAAGGCCAAACTGATTCCCCAGG------TCTGCCGTGCTCGGGAGATGCGGCCCCTCAG-CCCCTTGCTTGAACTCCTTTTGATGAGGTCAGCTGCCTCCCAAGAACAGGCTTTGGCAGCCT---------------------GAAAAAGTGCCCAGCACAGCCCTCAGACCACCCTCAGCCTTTCCCCAGACACTGGGCTGCAGTAGCTGAGATAAATGCAGGAGACCGTTCATTAAACCTACAAGGCGAACTGTCTGACCCGGCTGCAAGAAGGTGATTTCACAGGGTGCTGTTTT-GGGGAGGTAAGGGACTTACCTGAGCTGCCAGTGG--GAAAAAAATGCGTCTCACTGAAGTTGAAATGGCACAATCAGAAGCACTGAGG s nomLeu3.chr20 62994 602 + 85365473 CCCCAGATGCCTGCACTGGGAATG-GTGAGGTCAGTGTCCTGTCCATCGCATGCCCAGGCATGAGGGAAT----GGGGCATAAAGCTGATCATCCCCACC-----AAAGCCAGGGGAGACTTAATGGTCCTGAGGCTAAGCTTTGAGAA-GCTCAGCAAATGGCAGAAGTGGTAGGATTTCCCCCACAGGCTTCACCTGGATGCACTCCTATATCCCTAAGAGCATTCCCTAGTAAACTGTTGCAAAGGAG-CAGACACGGAGATGCAGAGCCTAGTGTGGCGGGATGGGTGATGGGGCGAGGTGTCCCCAACCCGAACAAGGAAGGCCAGTCTGATTCCCCGGG------TCTGCTGTGCTCGGGAGATGCGGCCCCTCAG-CCCCTTGCTTGAACTCCTTTTGATGAGGTCAGCTGCCTCCCAAGAACAAGCTCTGGCAGCCT---------------------GAAAAAGCGT----------------------------------------------------------------ATGCAGAAGATCGTTCATTAAACCTACAAAGCGAACTGTCTGACCCGGCTGCAAGAAGGCGATTTCACAGGGTGCTGTTTT-GGGGAGGTAAGGGACTTACCTGAGCTGTCAGTGG--G-AAAAAATGAGTCTCATTGAAGTTGAAATGGCACAGTCAAAAGCACTGAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33898939 657 + 185818997 CCCCAGATGCCTGCACTGGGAATG-GTGGGGCCAGTGTCCTGTCCATCTCATGCCCAGGCACAAGGAAGT----GGGGCATGAAGCTGGTCCTCGCCACC-----AAAGCCA-GGGAGACTCAATGGTCCTGAGGCTAAGCTTGGAGAA-G-TCAGCACATGGCAGAAGTGGAAGCACTT--CCCACAGGCTTCCCTTGGATGCAGTCCTCTCTCCCTGAGGGCATTCCA-GGTAAACTGTTATAAAGGAA-CAGACACGGAGAC-CAGAGCCTCATGTGGCGGGATGGGTGCTGGGGCGGGGGGTCCCTAGCCTGAGCGAGGGAGGCCAGATGGATT-CCGGGG------TCTGCTCTGCTGGGGAGAGGCGGCCCCTCAG-CCCCTTGCTTGAACTCCTTTTGACGAGGTCAGCTGCCT-CCAAGAACAGGCTTTGGCAGCCT---------------------GAAAAAGCATCCAGCACAGCCCTCAGACCACCCTCAGCCTTTCCCCAGACCCTGGGCTGCAGTAGCTGAGATAAATGCAGAATATCGTTCATTAAACCTACAGAGCGAACTGTCTGAGGCGGTTGCAAGAAGAGGATTTCACAGGGTGCTGATTT-GGGGAGGTAAGGGACTTACCTGAGCTTTCAGTGG--G--AAAAATGAGTCTCATTGAATCTGAAATGGCACAATCAGAAGCCCTGAGG i rheMac8.chr3 I 67 C 0 s macFas5.chr3 33514903 657 + 192294377 ccccagatgcctGCACTGGGAATG-GTGGGGCCAGTGTCCTGTCCATCTCATGCCCAGGCACAAGGAAGT----GGGGCATGAAGCTGGTCCTCGCCACC-----AAAGCCA-GGGAGACTCAATGGTCCTGAGGCTAAGCTTGGAGAA-G-TCAGCACATGGCAGAAGTGGAAGCACTT--CCCACAGGCTTCCCTTGGATGCAGTCCTCTCTCCCTGAGGGCATTCCA-GGTAAACTGTTATAAAGGAA-CAGACACGGAGAC-CAGAGCCTCATGTGGCGGGATGGGTGCTGGGGCGGGGGGTCCCTAGCCTGAGCGAGGGAGGCCAGACGGATT-CCGGGG------TCTGCTCTGCTGGGGAGAGGCGGCCCCTCAG-CCCCTTGCTTGAACTCCTTTTGACGAGGTCAGCTGCCT-CCAAGAACAGGCTTTGGCAGCCT---------------------GAAAAAGCATCCAGCACAGCCCTCAGACCACCCTCAGCCTTTCCCCAGACCCTGGGCTGCAGTAGCTGAGATAAATGCAGAATATCGTTCATTAAACCTACAGAGCGAACTGTCTGAGGCGGTTGCAAGAAGAGGATTTCACAGGGTGCTGATTT-GGGGAGGTAAGGGACTTACCTGAGCTTTCAGTGG--G--AAAAGTGAGTCTCATTGAATCTGAAATGGCACAATCAGAAGCCCTGAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4276679 657 - 9440265 CCCCAGATGCCTGCACTGGGAATG-GTGGGGCCAGTGTCCTGTCCATCTCATGCCCAGGCACAAGGAAGT----GGGGCATGAAGCTGGTCCTCGCCACC-----AAAGCCA-GGGAGACTCAATGGTCCTGAGGCTAAGCTTGGAGAA-G-TCAGCACATGGAAGAAGTGGAAGCACTT--CCCTCAGGCTTCCCTTGGATGCAGTCCTCTCTCCCTGAGGGCATTCCA-GGTAAACTGTTGTAAAGGAA-CAGACACGGAGAC-CAGAGCCTCATGTGGCGGGATGGGTGCTGGGGCGGGGGGTCCCCAGCCTGAGCAAGGGAGGCCAGACGGATT-CCGGGG------TCTGCTCTGCTGGGGAGAGGCGGCCCCTCAG-CCCCTTGCTTGAACTCCTTTTGACGAGGTCAGCTGCCT-CCAAGAACAGGCTTTGGCAGCCT---------------------GAAAAAGCATCCAGCACAGCCCTCAGACCACCCTCAGCCTTTCCCCAGACCCTGGGCTGCAGTAGCTGAGATAAATGCAGAATATCGTTCATTAAACCTACAGAGCGAACTGTCTGAGGCGGTTGCAAGAAGAGGATTTCACAGGGTGCTGATTT-GGGGAGGTAAGGGACTTACCTGAGCTTTCAGTGG--G--AAAAATGAGTCTCATTGAATCTGAAATGGCACAATCAGAAGCCCTGAGG i macNem1.NW_012019910v1 I 75 C 0 s cerAty1.NW_012002954v1 16865624 656 - 21915920 CCCCAGATGCCTGCACTGGGAATG-GTGGGGCCAGTGTCCTGTCCATCTCATGCCCAGGCACAAGGAAGT----GGGGCATGAAGCTGGTCCTCGCCACC-----AAAGCCA-GGGAGACTCAATGGTCCTGAGGCTAAGCTTGGAGAA-G-TCAGCACATGGCAGAAGTGGAAGCAATT--CCCACAGGCTTCCCTTGGATGCAGTCCTCTCTCCCTGAGGGCATTCCA-GGTAAACTGGTGTAAAGGAA-CAGACACGGAGAC-CAGAGCCTCATGTGGCGGGATGGGTGCTGGGGCGGGGGGTCCCCAGCCTGAGCGAGGGAGGCCAGACGGATT-CCGGGG------TCTGCTCTGCTGGGGAGAGGCGGCCCCTCAG-CCCGTTGCTTGAACTCCTTTTGACGAGGTCAGCTGCCT-CCAAGAACAGGCTTTGGCAGCCT---------------------GAAAAAGCATCCAGCACAGTCCTCAGACCACCCTCAGCCTTTCCCCAGACCCTGGGCTGCAGTAGCTGAGATAAATGCAGAATATCGTTCATTAAACCTACAGAGCGAACTGTCTGAGGCGGCTGCAAGAAGAGGATTTCACAGGGTGCTGATTT-GGGGAGGTAAGGGACTTACCTGAGCTTTCAGT-G--G--AAAAATGAGTCTCATTGAATCTGAAATGGCACAATCAGAAGCCCTGAGG i cerAty1.NW_012002954v1 I 67 C 0 s chlSab2.chr28 5947 657 - 21531802 ccccagatgcctGCACTGGGAATG-GTGGGACCAGTGTCCTGTCCATCTCATGCCCAGGCACAAAGAAGT----GGGGCATGAAGCTGGTCCTTGCCATC-----AAAGCCA-GGGAGACTCAATGGTCCTGAGGCTAAGCTTGGAGAA-G-TCAGCACATGGCAGAAGTGGAAGCACCT--CCCACAGGCTTCCCTTGGATGCAGTCCTCTCTCCCTGAGGGCATTCCA-GGTAAACTGTTGTAAAGGAA-CAGACATGGAGAC-CAGAGCCTCATGTGGCGGGATGGGTGCTGGGGCGGGGGGTCCCCAGCCTGAGCAAGGAAGGCCAGATGGATT-CCGGGG------TCTGCTCTGCTGGGGAGAAGTGACCCCTCAG-CCCCTTGCTTGAACTCTTTTTGACGAGGTCAGCTGCCT-CCAAGAACAGGCTTTGGCAGCCT---------------------GAAAAAGCATCTAGCACAGCCCTCAGACAACCCTCAGCCTTTCCCCAGACCCTGGGCTGCAGTAGGTGAAATAAATGCATAATATCGTTCATTAAACCTACAGAGAGAACTGTCTGACGCAGTTGCAAGAAGAGGATTTCACAGGGTGCTGCTTT-GGGGAGGTAAGGGACTTACCTGAGCTTTCAGTGG--G--AAAAATGAGTCTCATTgaagctgaaatagcacaatcagaagccctgagg i chlSab2.chr28 I 66 I 108 s manLeu1.NW_012101810v1 22392 657 - 2515279 CCCCAGATGCCTGCACTGGGAATG-GTGGGGCCAGTGTCCTGTCCATCTCATGCCCAGGCACAAGGAAGT----GGGGCATGAAGCTGGTCCTTGCCACC-----AAAGCCA-GGGAGACTCAATGGTCCTGAGGCTAAGCTTGGAGAA-G-TCAGCACATGGCAGAAGTGGAAGCAATT--CCCACAGGCTTCCCTTGGATGCAGTCCTCTCTCCCTGAGGGCATTCCA-GGTAAACTGTTGTAAAGGAA-CAGACACGGAGAC-CAGAGCCTCATGTGGCGGGATGGGTGCTGGGGCGGGGGGTCCCCAGCCTGAGCGAGGGAGGCCAGACGGATT-CCGGGG------TCTGCTCTGCTGGGGAGAGGCGGCCCCTCAG-CCCCTTGCTTGAACTCCTTTTGACGAGGTCAGCTGCCT-CCAAGAACAGGCCTTGGCAGCCT---------------------GAAAAAGCATCCAGCACAGCCCTCAGACCACCCTCAGCCTTTCCCCAGACCCTGGGCTGCAGTAGCTGAGATAAATGCAGAATATCGTTCATTAAACCTACAGAGCGAACTGTCTGAGGCGGTTGCAAGAAGAGGATTTCACAGGGTGCTGATTT-GGGGAGGTAAGGGACTTACCTGAGCTTTCAGTGG--G--AAAAATGAGTCTCATTGAATCTGAAATGGCACAATCAGAAGCCCTGAGG i manLeu1.NW_012101810v1 I 67 C 0 s calJac3.chrUn_GL286443 6736 671 + 9146 CCCCAGATGCCTGCGTTGGGAATG-GTGGGGCCACCGTCATGTTCATCTCATGCCCAAGCCAGAGGAGACTTAATGATCCTGAGGCTAAGGA---CCACC-----AAAGCCACAGGAGACTTAATGGTCCTGAGGCTAAGCTTTGAGAATG-CCACAAAATGATAGAAGGGGTAGGATTT-CCCCACAGGCTTCAATTGGATACACTCCTATATCCCTGAGGGCATCCCCTAGTAAACTGTTGTAAAGGAG-CAGATATGCAGATGCAGAGCCTAGTGTGGCAGGATGGGTGATGAGGCAGAGTGTCCCCAACGTAAGCGAGGAAGGCCAGACAGATT-CCTGGGGTCTGCTCTGCTCTGCTTGGGAGAGGTGTCTCTTCAG-CCCCTTGCTCGAACTCCTCTTGATGAGGTCAGCTGCCTCCCAAGAACAGGCTTTGGCAGTCT---------------------GAAAAAGCATCCAGAACAGCCCTCAGACCACCCTCAGCCATTCCCCAGAACCTGGACTGCAGTAGCTGAAATAAATGCAGGAGACCATTCATTAAACTCACAAAGCAGACTGTGTGACCTGGCTGGGAGAAGGCGATTTCACAGGGTGCTGTTTT-GAAGAGGTAAGGGACTTACCTGACCTTTCAGTGG--G-ATAAAATGAGTCACATTGAGGCTAAAATGGCACAATCAGAAGCAGTGAGG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 388984 672 - 2125214 CCCCAGATGCTTGCACTGGGAATG-GTTGGGCCAGTGTCCTGTCCATCTCATGCCCAAGCTGGAGGAAAC----AGGGCATGAAGCTGGTCATCCCCACC-----AAAGCCACAGGAGACTTAATGGTCCTGAGGCTAAGCTTTGAGAATG-CCACAAAACGATAGAAGTGGTAGGATTT-CCCCACAGGCTTCAATTGGATACACTCCTATATCCCTGAGGGCATCCCCTAGTAAACCGTTGTAAAGGAG-CAGATATGCAGATGCAGAGCCTAGTGTGGCAGGGTGGGTGATGGGGCAGAGTGTCCCCAACATGAGTGAGGAAGGCCGGACCGATT-CCCGGGATCTGCTCTGCTCTGCTCGGGAGATGTGGCTCCTCAG-CCCCTTGCTTGAAGTCCTCTTAATGAGGTCAGCTGCCTCCCAAGAACAGGCTTTGGCAGTCT---------------------GAAAAAGCATCCAGAACAGCCCTCAGACCACCCTCAGCCTTTTCCCAAACCCTGGACTGCAGTAGCTGAGATAAATGCAGGAGACCGTTCATTAAACCCACAAAGCAGACTGTGTGACCTGGCTGCAAGAAGGCAATTTCACAGGGTGCTGTTTT-GGGGAGGTAAGGGACTTACCTGAGCTTTCAGTGGAAA-AAAAAATGAGTCTCATTGAGGCTAAAATGGCACAATCAGAAGCAGTGAGG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2098665 652 - 8137123 CTCTCAGTGTCTGCCCTGGGTGTTCTTGGGGTGTGTGTCCTGCGCATCCCA-----AACCATGAAGAAAT----GGGCCATGAAGCTGACTGGCCCCACTTTGAGAAAGTCAGTGGAGACCTGAT-GTTCTGAGGCTGTTCGTTGAGAATG-TCAG-----GGCAGAAGTGGTGGGATTT-CCCCACAGGCGTCACTTGAAGGTGTTCCTATCTGTATGAAGGCATTCCCTAGAAAACCCTTAAGATGGAGCCAGACACCAGGAAGGGCAACCCAGGGTGGCAGGGCTGGTGTAGAGG--GGTTGTCCCCAAATTGA------AAGGACTG-----TG-ATGGGG------GATGCT---CTTGGGAGACGTGGCCCCTCAGCCCCCTCACTTGAGCTTGTCTGGACGGGGCCAGCTGCCTCCCAAGCACCAGTTTTGGTAGCCTCCAACAGGGCCAAACTGTGGAAGGAAGATGCCCAGCAGAGCTCCCAGACAGCATCCATCCCTTCCCCAGACCCTGGGTTACTGTGGCTGAGATAAGTGCAG---ACCATTCATTAAATCCAT------GCCCATCTGGCATGGTTGTAAGAGTGTTATCTCACAGGGTGCTGTTCTGGGGGAAGTGAGGTACTTTCCTGAGCTTCTAGTAA--G-----AATGAGCCTTGTTGGGG-TGAAAT-GCACAGTCATCTGTGCTGAGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=6799.000000 s hg38.chr7_KI270899v1_alt 36595 4 + 190869 CCCA s nomLeu3.chr20 63596 4 + 85365473 TCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33899596 4 + 185818997 TCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33515560 4 + 192294377 TCCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277336 4 - 9440265 TCCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866280 4 - 21915920 TCCG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 23049 4 - 2515279 TCTG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 7407 4 + 9146 TCCA i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 389656 4 - 2125214 TCCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2099317 2 - 8137123 TC-- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6604 108 - 21531802 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=119853.000000 s hg38.chr7_KI270899v1_alt 36599 31 + 190869 GTGCTGGCCCGCCCATGCCATGGACGACATA s nomLeu3.chr20 63600 31 + 85365473 GTGCTGGTCAGCCCATGCCATGGCCAACATA i nomLeu3.chr20 C 0 T 21 s rheMac8.chr3 33899600 31 + 185818997 GTGCTGGCCAGCCCACGCCATGGACAACATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33515564 31 + 192294377 GTGCTGGCCAGCCCACGCCATGGACAACATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277340 31 - 9440265 GTGCTGGCCAGCCCACGCCATGGACAACATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866284 31 - 21915920 GTGCTGGCCAGCCCACGCCATGGACAACATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 6712 31 - 21531802 GTGCTGGCCAGCCCACGCCATGGACAACATA i chlSab2.chr28 I 108 C 0 s manLeu1.NW_012101810v1 23053 31 - 2515279 GTGCTGGCCAGCCCACGCCATGGACAACATA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 7411 31 + 9146 GCACTGGCCAGCCCATGCCATGGACAATATA i calJac3.chrUn_GL286443 C 0 T 24 s cebCap1.NW_016107703v1 389660 31 - 2125214 GTGCTGACCAGCCCATGCCATGGGCAACATA i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2099319 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=46302.000000 s hg38.chr7_KI270899v1_alt 36630 21 + 190869 AGGACTGTTGGAGAAGAG---GAG s rheMac8.chr3 33899631 24 + 185818997 AGGACTATTGGAGAAGAGGAAGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33515595 24 + 192294377 AGGACTATTGGAGAAGAGGAAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277371 24 - 9440265 AGGACTATTGGAGAAGAGGAAGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866315 24 - 21915920 AGGACCATTGGAGAAGAGGAAGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 6743 24 - 21531802 AGGACTATTGGAGAAGAGGAAGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23084 24 - 2515279 AGGACTATTGGAGAAGAGGAAGAG i manLeu1.NW_012101810v1 C 0 C 0 s cebCap1.NW_016107703v1 389691 20 - 2125214 AGGACTGTT-GAGAAGAGGAG--- i cebCap1.NW_016107703v1 C 0 I 41 e otoGar3.GL873611 2099319 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e calJac3.chrUn_GL286443 7442 24 + 9146 T e nomLeu3.chr20 63631 21 + 85365473 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=36888.000000 s hg38.chr7_KI270899v1_alt 36651 20 + 190869 ACGTGAACAGTGTGCAGCTT s rheMac8.chr3 33899655 20 + 185818997 ATGTGAACAGcatgcagctt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33515619 20 + 192294377 ATGTGAACAGcatgcagctt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277395 20 - 9440265 ATGTGAACAGcatgcagctt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866339 20 - 21915920 ACGTGAACAGcatgcagctt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 6767 20 - 21531802 ACGTGAACAGcatgcagctt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23108 20 - 2515279 ACGTGAACAGcatgcagctt i manLeu1.NW_012101810v1 C 0 C 0 s otoGar3.GL873611 2099319 8 - 8137123 ------------TGCTGCTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e calJac3.chrUn_GL286443 7442 24 + 9146 T e nomLeu3.chr20 63631 21 + 85365473 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=3344.000000 s hg38.chr7_KI270899v1_alt 36671 3 + 190869 CCC- s rheMac8.chr3 33899675 3 + 185818997 ccc- i rheMac8.chr3 C 0 I 8 s macFas5.chr3 33515639 3 + 192294377 ccc- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277415 3 - 9440265 cct- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866359 3 - 21915920 ccc- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 6787 3 - 21531802 ccc- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23128 3 - 2515279 ccc- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 7418 2 + 9146 -CC- i calJac3.chrUn_GL286443 T 24 I 1 s otoGar3.GL873611 2099327 3 - 8137123 -TCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e nomLeu3.chr20 63631 21 + 85365473 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=5357.000000 s hg38.chr7_KI270899v1_alt 36674 2 + 190869 GC s nomLeu3.chr20 63610 2 + 85365473 GC i nomLeu3.chr20 T 21 C 0 s macFas5.chr3 33515642 2 + 192294377 ac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277418 2 - 9440265 gc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866362 2 - 21915920 gc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 6790 2 - 21531802 gc i chlSab2.chr28 C 0 I 6 s manLeu1.NW_012101810v1 23131 2 - 2515279 gc i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 7421 2 + 9146 GC i calJac3.chrUn_GL286443 I 1 C 0 s otoGar3.GL873611 2099330 2 - 8137123 AC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=7692.000000 s hg38.chr7_KI270899v1_alt 36676 4 + 190869 CCAT s nomLeu3.chr20 63612 4 + 85365473 CCAT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33515644 4 + 192294377 tcat i macFas5.chr3 C 0 T 68 s macNem1.NW_012019910v1 4277420 4 - 9440265 tcat i macNem1.NW_012019910v1 C 0 I 2 s cerAty1.NW_012002954v1 16866364 4 - 21915920 tcat i cerAty1.NW_012002954v1 C 0 I 2 s manLeu1.NW_012101810v1 23133 4 - 2515279 tcat i manLeu1.NW_012101810v1 C 0 I 2 s calJac3.chrUn_GL286443 7423 4 + 9146 CCAT i calJac3.chrUn_GL286443 C 0 C 0 s otoGar3.GL873611 2099332 4 - 8137123 CCAC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=29437.000000 s hg38.chr7_KI270899v1_alt 36680 63 + 190869 -GCCATGGACAACACAAGGACTGTTGGAGAAGAGGAGGAAATGTGAATAGTATGCAGCTTCCCG s nomLeu3.chr20 63616 63 + 85365473 -GCCATGGCCAACATAAGGACTGTTGGAGAAGAGGAGGAGACGTGAACGGTATGCAGCTTCCCG i nomLeu3.chr20 C 0 T 48 s macFas5.chr3 33515580 63 + 192294377 -GCCATGGACAACATAAGGACTATTGGAGAAGAGGAAGAGATGTGAACAGcatgcagcttccca i macFas5.chr3 T 68 C 0 s calJac3.chrUn_GL286443 7427 59 + 9146 -GCCATGGACAATATAAGGACTGTTGGAGAAGAGGAGGAAGTGTGAATAGTACACAGCCA---- i calJac3.chrUn_GL286443 C 0 C 0 s otoGar3.GL873611 2099336 44 - 8137123 AGCCA-GGACAAGTTAAGGGCTGTCAGAGAGAAGGAG--AATATAAA----------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=343.000000 s hg38.chr7_KI270899v1_alt 36743 4 + 190869 CACA s macFas5.chr3 33515643 4 + 192294377 ctca i macFas5.chr3 C 0 T 76 s calJac3.chrUn_GL286443 7486 4 + 9146 TGCA i calJac3.chrUn_GL286443 C 0 C 0 e otoGar3.GL873611 2099380 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e nomLeu3.chr20 63679 48 + 85365473 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=748.000000 s hg38.chr7_KI270899v1_alt 36747 10 + 190869 CACTGCACCC s calJac3.chrUn_GL286443 7490 10 + 9146 CACTGCACGC i calJac3.chrUn_GL286443 C 0 C 0 e otoGar3.GL873611 2099380 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515647 76 + 192294377 T e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e nomLeu3.chr20 63679 48 + 85365473 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=273.000000 s hg38.chr7_KI270899v1_alt 36757 1 + 190869 A s nomLeu3.chr20 63631 1 + 85365473 A i nomLeu3.chr20 T 48 C 0 s calJac3.chrUn_GL286443 7500 1 + 9146 A i calJac3.chrUn_GL286443 C 0 T 59 e otoGar3.GL873611 2099380 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515647 76 + 192294377 T e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=2231.000000 s hg38.chr7_KI270899v1_alt 36758 56 + 190869 GGACTGTTGGAGAAGAGGAGGAGATGTGAACAGTATGCAGCTTCCCG--------CACACACTG s nomLeu3.chr20 63632 64 + 85365473 GGACTGTTGGAGAAGAGGAGGAGACGTGAACGGTATGCAGCTTCCCGCGCtgccacgcacaccg i nomLeu3.chr20 C 0 C 0 s otoGar3.GL873611 2099380 10 - 8137123 ------------------------------------------------------GCACACACTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515647 76 + 192294377 T e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e calJac3.chrUn_GL286443 7501 59 + 9146 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=266.000000 s hg38.chr7_KI270899v1_alt 36814 5 + 190869 CACCC s nomLeu3.chr20 63696 5 + 85365473 cacgc i nomLeu3.chr20 C 0 C 0 e otoGar3.GL873611 2099390 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515647 76 + 192294377 T e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e calJac3.chrUn_GL286443 7501 59 + 9146 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=273.000000 s hg38.chr7_KI270899v1_alt 36819 1 + 190869 A s nomLeu3.chr20 63701 1 + 85365473 a i nomLeu3.chr20 C 0 T 70 s calJac3.chrUn_GL286443 7442 1 + 9146 A i calJac3.chrUn_GL286443 T 59 C 0 e otoGar3.GL873611 2099390 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515647 76 + 192294377 T e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=9989.000000 s hg38.chr7_KI270899v1_alt 36820 41 + 190869 GGACTGTTGGAGAAGAGGAGGAAATGTGAACAGTATGCAGC s nomLeu3.chr20 63632 41 + 85365473 GGACTGTTGGAGAAGAGGAGGAGACGTGAACGGTATGCAGC i nomLeu3.chr20 T 70 C 0 s calJac3.chrUn_GL286443 7443 41 + 9146 GGACTGTTGGAGAAGAGGAGGAAGTGTGAATAGTACACAGC i calJac3.chrUn_GL286443 C 0 T 66 e otoGar3.GL873611 2099390 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515647 76 + 192294377 T e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=182.000000 s hg38.chr7_KI270899v1_alt 36861 2 + 190869 TT s nomLeu3.chr20 63673 2 + 85365473 TT i nomLeu3.chr20 C 0 C 0 e otoGar3.GL873611 2099390 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515647 76 + 192294377 T e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e calJac3.chrUn_GL286443 7484 66 + 9146 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=-110.000000 s hg38.chr7_KI270899v1_alt 36863 3 + 190869 CCC- s nomLeu3.chr20 63675 3 + 85365473 CCC- i nomLeu3.chr20 C 0 T 68 s macFas5.chr3 33515571 2 + 192294377 -CC- i macFas5.chr3 T 76 I 1 s calJac3.chrUn_GL286443 7418 3 + 9146 -CCA i calJac3.chrUn_GL286443 T 66 C 0 e otoGar3.GL873611 2099390 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=29140.000000 s hg38.chr7_KI270899v1_alt 36866 69 + 190869 GCCCATGCCATGGACGACATAAGGACTTTTGGAGAAGAGGAGGAAACGTGAATAGTATGCAGCTTCCCG s nomLeu3.chr20 63610 69 + 85365473 GCCCATGCCATGGCCAACATAAGGACTGTTGGAGAAGAGGAGGAGACGTGAACGGTATGCAGCTTCCCG i nomLeu3.chr20 T 68 T 48 s macFas5.chr3 33515574 69 + 192294377 GCCCACGCCATGGACAACATAAGGACTATTGGAGAAGAGGAAGAGATGTGAACAGcatgcagcttccca i macFas5.chr3 I 1 C 0 s calJac3.chrUn_GL286443 7421 65 + 9146 GCCCATGCCATGGACAATATAAGGACTGTTGGAGAAGAGGAGGAAGTGTGAATAGTACACAGCCA---- i calJac3.chrUn_GL286443 C 0 C 0 e otoGar3.GL873611 2099390 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=343.000000 s hg38.chr7_KI270899v1_alt 36935 4 + 190869 CACA s macFas5.chr3 33515643 4 + 192294377 ctca i macFas5.chr3 C 0 T 52 s calJac3.chrUn_GL286443 7486 4 + 9146 TGCA i calJac3.chrUn_GL286443 C 0 C 0 e otoGar3.GL873611 2099390 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e nomLeu3.chr20 63679 48 + 85365473 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=100.000000 s hg38.chr7_KI270899v1_alt 36939 1 + 190869 C s calJac3.chrUn_GL286443 7490 1 + 9146 C i calJac3.chrUn_GL286443 C 0 C 0 e otoGar3.GL873611 2099390 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515647 52 + 192294377 T e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e nomLeu3.chr20 63679 48 + 85365473 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=1337.000000 s hg38.chr7_KI270899v1_alt 36940 9 + 190869 ACTGCACCC s calJac3.chrUn_GL286443 7491 9 + 9146 ACTGCACGC i calJac3.chrUn_GL286443 C 0 T 58 s otoGar3.GL873611 2099390 9 - 8137123 AGTGCACAT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515647 52 + 192294377 T e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e nomLeu3.chr20 63679 48 + 85365473 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=14963.000000 s hg38.chr7_KI270899v1_alt 36949 49 + 190869 AGGACTGTTGGAGAAGAGGAGGAGATGTGAACAGTATGCAGCTTCCCGC s nomLeu3.chr20 63631 49 + 85365473 AGGACTGTTGGAGAAGAGGAGGAGACGTGAACGGTATGCAGCTTCCCGC i nomLeu3.chr20 T 48 C 0 s macFas5.chr3 33515595 49 + 192294377 AGGACTATTGGAGAAGAGGAAGAGATGTGAACAGcatgcagcttcccac i macFas5.chr3 T 52 I 4 s calJac3.chrUn_GL286443 7442 42 + 9146 AGGACTGTTGGAGAAGAGGAGGAAGTGTGAATAGTACACAGC------- i calJac3.chrUn_GL286443 T 58 C 0 s otoGar3.GL873611 2099399 4 - 8137123 ----------------AGGA----------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=4106.000000 s hg38.chr7_KI270899v1_alt 36998 29 + 190869 GCTGCCACGCACACTGCACGCGTTGATTG s nomLeu3.chr20 63680 29 + 85365473 GCtgccacgcacaccgcacgcattgattg i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 7484 21 + 9146 -----CATGCACACTGCACGCATCCA--- i calJac3.chrUn_GL286443 C 0 C 0 e otoGar3.GL873611 2099403 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515644 4 + 192294377 I e rheMac8.chr3 33899678 8 + 185818997 I e cebCap1.NW_016107703v1 389711 41 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=5303.000000 s hg38.chr7_KI270899v1_alt 37027 10 + 190869 GGTCCCTCGG s nomLeu3.chr20 63709 10 + 85365473 ggtccctcag i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 7505 9 + 9146 -GTACCTCAG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 389752 10 - 2125214 ggtcccttgg i cebCap1.NW_016107703v1 I 41 C 0 s otoGar3.GL873611 2099403 8 - 8137123 --TCCCTCAA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e macFas5.chr3 33515644 4 + 192294377 I e rheMac8.chr3 33899678 8 + 185818997 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=1185.000000 s hg38.chr7_KI270899v1_alt 37037 2 + 190869 TA s nomLeu3.chr20 63719 2 + 85365473 tc i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33515648 2 + 192294377 tc i macFas5.chr3 I 4 C 0 s calJac3.chrUn_GL286443 7514 2 + 9146 TC i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 389762 2 - 2125214 tc i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2099411 2 - 8137123 CC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 6792 6 - 21531802 I e manLeu1.NW_012101810v1 23137 2 - 2515279 I e cerAty1.NW_012002954v1 16866368 2 - 21915920 I e macNem1.NW_012019910v1 4277424 2 - 9440265 I e rheMac8.chr3 33899678 8 + 185818997 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=783338.000000 s hg38.chr7_KI270899v1_alt 37039 252 + 190869 CTCAGGCAGcctccaaggcaggctttgccattcctgttcccatttcacagttgaagaagtgaggttcagagctgtgaagtaaA----GGGGCTCGGGTTCAAGCTGGGCTGCCA--AATGCTGAGGTGCAGCCCCTGAGGACTTCA-TAAAAGTCACCCTCTGTG----G--GAAGAGCTGC-CACGGGGCATCATCTGTAGCATCTGGAAGGAACGCCAGTAATCCCACCGTCCCACAGTCATTTCCCCGAGATCTTAGGTCTCA s nomLeu3.chr20 63721 253 + 85365473 ctcaggcagcctccacggcaggctttgccattcctgttcccatttcacagttgaagaagtgaggttcagagctctgaagttaa---CGGGGCTGGGGTTCAAGCTGGGCTGTCA--AATGCTGAGGTACAGCCCCTGAGGACTTCA-TAAAAGTCACCCACTGTG----G--GAAGAGCTGC-CACGGGGCATCATCTGTAACATATGGAAGGAACGCCAGTGATCCCACAGTCCCACAGTCATTTCCCTGAGATCTTAGGTCTCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33899686 237 + 185818997 ctcagacagcctccaaagcaggctctgccattcctgttcccatttcacagctgaggaag---------------tgaagtaaa----ggggctGCGGTTCAAGCTGGGCTGTCC--AGTGATGACGTGCAGCCACCAAAGACTTCA-TAAAAGTCACCCACTGTG----G--GAAGAGGGGC-CACAGGGCGTCATCTGTAGCATCTGGAAGGACCACCAGTGGCCCCACAGTCCTACAGCCACTTCCCTGAGATCTTAGGCCTCA i rheMac8.chr3 I 8 C 0 s macFas5.chr3 33515650 237 + 192294377 ctcagacagcctccaaagcaggctctgccattcctgttcccatttcacagctgaggaag---------------tgaagtaaa----ggggctGCGGTTCAAGCTGGGCTGTCC--AGTGATGACGTGCAGCCACCAAAGACTTCA-TAAAAGTCACCCACTGTG----G--GAAGAGGGGC-CACAGGGCGTCATCTGTAGCATCTGGAAGGACCACCAGTGGCCCCACAGTCCCACAGCCACTTCCCTGAGATCTTAGGCCTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277426 237 - 9440265 ctcagacagcctccaaagcaggctctgccattcctgttcccatttcacagctgaggaag---------------tgaagtaaa----ggggctGCGGTTCAAGCTGGGCTGTCC--AGTGATGACGTGCAGCCACCAAGGACTTCA-TAAAAGTCACCCACTGTG----G--GAAGAGGGGC-CACAGGGCGTCATCTGTAGCATCTGGAAGGACCACCAGTGGCCCCACAGTCCCACAGCCACTTCCCTGAGATCTTAGGCCTCA i macNem1.NW_012019910v1 I 2 C 0 s cerAty1.NW_012002954v1 16866370 236 - 21915920 ctcagacagcctccaaagcaggctctgccattcctattcccatttcacagctgaggaag---------------cgaagtaaa-----gggCTGCGGTTCAAGCTGGGCTGTCC--AGTGATGACGTGCAGCCACCAAGGACTTCA-TAAAAGTCACCCACTGTG----G--GAAGAGGGGC-CACAGGGCGTCATCTCTAGCATCtggaaggaccaccagtggccccacagtcccacagccgcttccctgagatcttaggcctca i cerAty1.NW_012002954v1 I 2 C 0 s chlSab2.chr28 6798 237 - 21531802 ctcagacagcctccaaagcaggctctgccattcctgctcccatttcacagctgaggaag---------------tgaagtaaa----ggggctGCGGTTCAAGCTGGGCTGCCT--GATGCTGAGGTGCAGGCACCGAGGACTTCG-TAAAAGTCACCCACTGTG----G--GAAGAGGGGC-CACAGGGAGTCATCTGTAGCATCTGGAAGGACCACCAGTGGCCCCACAGTCCCACAGCCGCTTCCCTGAAATCTTAGGCCTCA i chlSab2.chr28 I 6 C 0 s manLeu1.NW_012101810v1 23139 237 - 2515279 ctcagacagcctccaaagcaggctctgccattcctgttcccatttcacagctgaggaag---------------tgaagtaaa----ggggctgtggttcaagctgagctgtcc--aaTGATAACGTGCAGCCACCGAGGACTTCA-TAAAAGTCACCCACTGTG----G--GAAGAGAGGC-CACAGGGCGTCATCTCTAGCATCTGGAAGGACCACCAGTGGCCCCACAGTCCCACAGCCGCTTCCCTGAGATCTTAGGCCTCA i manLeu1.NW_012101810v1 I 2 C 0 s calJac3.chrUn_GL286443 7516 244 + 9146 CTCAGACAGCCTCCAAGGCAGGCT-TGCCATTCCTGTTCCCATTCCACAGTTGAAGAATTGGGATCCAGAGCTGTGAAGTAAA----GGGGCTGAGGTTCAAGCTGGGTGGCCT--AATGCTAAGATGCA---ACGTAGCACTACA-GAAAAGTCACCCACTGTGGTGTG--GAAGAGCTGC-CATGGAAAATCATCTGTAGCATCACGAAGGTCCATCATTG--------GTCCCACAGTCATTTCCCTGAGACCTAAGATCTCA i calJac3.chrUn_GL286443 C 0 I 4 s cebCap1.NW_016107703v1 389764 244 - 2125214 cttagacagcctccaaggcaggct-tgccattcctgttcccattccacagttgaagaaacgagatccagaactgtgaagtaaA----GGGGTTGGGGTTCAAGCTGGGCTGTCT--AATGCTAAGATGCA---ATGTAGCACTACA-GAAAAGTCACCCACTATGGTGTG--GAAGAGCTGC-CATGGAGAATCATCTGTAGCATCTGGAAGGTCCATCATTG--------GTCTCACAGTCATTTCCCTGAGATCTTAGGTCTCA i cebCap1.NW_016107703v1 C 0 I 17 s otoGar3.GL873611 2099413 190 - 8137123 CTCA--CAGCC--------------------------------------GCTGAGCAAA----------------GAAACCAGCCCCAGAGCTG----TCCAGCAGGGGTCCCCTGACTACTGAGGCTCTACC-CTTGGCACTGCACTAAAAGCTACCCACTGTG----GTCAGAGAGCTGCTCACAGGG---CATCCTTAGCACCTAGGAGGGCCCCCAGTG--------GTCCTGTGGCATTTTCCCTGATATGGTAGGTCTCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=41040.000000 s hg38.chr7_KI270899v1_alt 37291 23 + 190869 -AATGCCTTTGAAAATTCATttta s nomLeu3.chr20 63974 23 + 85365473 -AATGCCTTTGAAAATTCATTTTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33899923 22 + 185818997 -GATGCCTGC-AAAATTCATttca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33515887 22 + 192294377 -GATGCCTGC-AAAATTCATttca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277663 22 - 9440265 -GATGCCTGC-AAAATTCATttca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866606 22 - 21915920 -gatgcctgc-aaaattcatttca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 7035 22 - 21531802 -GATGCCTGC-AAAATTCATTTCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23376 22 - 2515279 -GATGCCTGC-AAAATTCATttca i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 7764 13 + 9146 -AATGACTGT-GGGA--------- i calJac3.chrUn_GL286443 I 4 C 0 s otoGar3.GL873611 2099603 17 - 8137123 AACTCCCTGG-AAAGTTC------ i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e cebCap1.NW_016107703v1 390008 17 - 2125214 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=123680.000000 s hg38.chr7_KI270899v1_alt 37314 47 + 190869 ca-----------tggctttctc----------ctctgttatatttcgatccccagggcatggtgtat s nomLeu3.chr20 63997 48 + 85365473 CAG----------AAGCTGTCTC----------CTCTGTTGTATTTCGATCCCCAGGGCGTGGTGTAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33899945 46 + 185818997 ca------------cgctgtctc----------ctccgttatatttcgatccccaaggcatgctacat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33515909 46 + 192294377 ca------------cgctgtctc----------ctccgttatatttcgatccccaaggcatgctacat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277685 46 - 9440265 ca------------cgctgtctc----------ctccgttatatttcgatccccaaggcatgctacat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866628 46 - 21915920 ca------------cactgtgtc----------ctccgttatatttcgatccccaaggcatgctacat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 7057 46 - 21531802 CA------------CCCTGTGTC----------CTCCGTTATATTTCGATCCCCAAGGCACGCTACAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23398 46 - 2515279 ca------------cgctgtctc----------ctccgttatatttcgatccccaaggcatgctacat i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 7777 47 + 9146 CA-----------TGACTGTGTC----------CACTATTATATTTCAATCCCTGGGGCGTGGTGTAT i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390025 47 - 2125214 CA-----------CAACTGTGTC----------CACTATTATATTTCAGTCCCCGGGGCATGGTGTAT i cebCap1.NW_016107703v1 I 17 C 0 s otoGar3.GL873611 2099620 66 - 8137123 --CATGGGAAGGAGCTCTGGGCCTTTGTACAGACCTTACTTTACTTCCAGACCCATGCTATGGAGTAT i otoGar3.GL873611 C 0 I 167 e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=577956.000000 s hg38.chr7_KI270899v1_alt 37361 158 + 190869 gtgctagttgccatttctagcctcagcctactttatgtaggcactgagcaaatgctgaatgaatCATTACACATGTTCACTGAGC-TTTTTTTGAGAACTCTGACTGGTTGAAGTATTTACTACTCACTCTGGGAACTTGAAACAAAAAGCGACTAAAT s nomLeu3.chr20 64045 158 + 85365473 GTGCTAGTTGCCATTTCTAGCCTCAGCCTACTTTACGTAGGCACCGAGTACATGCCGAATGAATCATTACACTTGTTCACTGAGC-TTTTTTTGAGAACTCTGACTGGTTGAAGTATTTACTACTCACTCTGGGAACTTGAAACAAAAAGTGACTAAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33899991 158 + 185818997 gtgctagttgccatttctagcctcagcctactttatgtagacacagagtaaacgttgaatgaatCACTACACATGTTCACTGAGC-TTTATTTGAGAACTCTGACTGGTTGAAGTATTTACTACTCACTCGAGGAACTTGAAACAAAAAGCAACTACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33515955 158 + 192294377 gtgctagttgccatttctagcctcagcctactttatgtaggcgcagagtaaacgttgaatgaatCACTACACATGTTCACTGAGC-TTTATTTGAGAACTCTGACTGGTTGAAGTATTTACTACTCACTCGAGGAACTTGAAACAAAAAGCAACTACAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277731 158 - 9440265 gtgctagttgccatttctagcctcagcctactttatgtaggcgcagagtaaacgttgaatgaatCACTACACATGTTCACTGAGC-TTTATTTGAGAACTCTGACTGGTTGAAGTATTTACTACTCACTCGAGGAACTTGAAACAAAAAGCAACTACAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866674 158 - 21915920 gtgctagttgccatttctagcctcagcctactttatgtaggcgcagagtaaatgttgaatgaatCACTACACATGTTCACTGAGC-TTTATTTGAGAACTCTGACTGGTTGAAGTATTTACTACTCACTCGAGGAACTTGAAACAAAAAGCAACTACAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 7103 158 - 21531802 GTGCTAGTTGCCATTTCTAGCCTCAGCCTACTTTATGTAGGCACAGAGTAAACGTTGAATGAATCACTACACATGTTCACTGAGC-TTTATTTGAGAACTCTGACTGGTTGAAGTATTTACTACTCACTCGAGGAACTTGAAACAAAAAGCAACTACAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23444 158 - 2515279 gtgctagttgccatttctagcctcagcctactttatgtaggcgcagagtaaacgttgaatgaatCACTACACATGTTCACTGAGC-TTTATTTGAGAACTCTGACTGGTTGAAGTATTTACTACTCACTCGAGGAACTTGAAACAAAAAGCAACTACAT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 7824 154 + 9146 GTGCTAGTTGCCATTTCTTGCTTCAGTCTACTTTGTGTAGGTGCAGAGTAAATGTTGAATGAATCATTATACATGTTCACTGAAC-TTTCTTTGAGAACT----CTGGTTGAAGTATTTGCTACTCACTCTGTGAACTTGAAACAAAAAGCAACTAAAT i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390072 155 - 2125214 GTGCTACTTGCCATTTCTAGCTTCAGTTTGCTTTGTGTAGGTGCAGAGTAAATGTTGAATGACTCATTATACATGTTCACTGAACTTTTTTTTGAGAACT----CTCGTTGAAGTATTTGCTACTCACTCTGTGAACTTGAAATAAAAAGTGACTAAAT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2099686 167 - 8137123 I e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=655993.000000 s hg38.chr7_KI270899v1_alt 37519 202 + 190869 GACAGAGGCTGGGCCTGAGAGCACAGGTTGCA----TCGTGC-----------------TGGGGGAGGTCCCCTGTGCAGGGCACCAtccctcacccactcacccgctcactcactcattcTTCCTTTCACTGGACTCTGTCAACTGGGGGTTCccacgtgccacgccccgtgcaaggtgctgggtacacagcagtgaatgctgacaatggtcatgataatag s nomLeu3.chr20 64203 194 + 85365473 GACAGAGGTTGGGCCTGAGAGCACAGGTTGCA----TCATGC-----------------TGGGTAAGGTCCCCCGTGCAGGGCACCAtccctcacccactcac--------tcactcattcTTCCTTTCACTGGACTCTGTCAACTGGGGGTTCccacgtgccaggccctgtgcaagatgctgggtacacagcagtgaatgctgacaatggtcacgataatag i nomLeu3.chr20 C 0 I 3 s rheMac8.chr3 33900149 192 + 185818997 GACAGAGGTTCAGGCTGACAGCACCGTCTGCA----CCACGC-----------------TGGGCGAGCTCCCGTGTGC-GGACACCGTCACTCCTCCGCTAGC--------TCACTCCTTCTTCCGTGCACTGGATTCTGTCAGCC-GGGGTTCccacgtgccaggctccgtgcaaggtgctgggtacacagaagtgaatgccgacaatggtcATGATAACAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33516113 192 + 192294377 GACAGAGGTTCAAGCTGACAGCACCGTCTGCA----CCACGC-----------------TGGGCGAGTTCCCGTGTGC-GGACACCGTCACTCCTCCGCTAGC--------TCACTCCTTCTTCCGTGCACTGGATTCTGTCAGCC-GGGGTTCccacgtgccaggctccgtgcaaggtgctgggtacacagaagtgaatgccgacaatggtcATGATAACAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4277889 192 - 9440265 GACAGAGGTTCAGGCTGACAGCACCGTCTGCA----CCACGC-----------------TGGGCGAGCTCCCGTGTGC-GGACACCGTCACTCCTCCGCTAGC--------TCACTCCTTCTTCCGTGCACTGGATTCTGTCAGCC-GGGGTTCccacgtgccaggctccgtgcaaggtgctgggtacacagaagtgaatgccgacaatggtcATGATAACAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16866832 192 - 21915920 GACAGAGGTTCGGGCTGACAGCACCGTCTGCA----CCACGC-----------------TGGGCGAGCTCCCGTGTGC-GGACACCGTCACTCCTCCGCTAGC--------TCACTCCTTCTTCCGTGCACTGGATTCTGTCAGCC-AGGGTTCccacgtgccaggctccgtgcaaggtgctgggtacacagaagtgaatgccgacaatggtcATGATAACag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 7261 192 - 21531802 GCCAGAAGTTCGGGCTGACAGCACCGTTTGCA----CCATGC-----------------TGGGTGAGCTCCCGTGTGC-GGACACCGTCACTCCTCCGCTAGC--------TCACTCCTTCTTCCGTGTACTAGATTCTGTCAGCc-tgggttcccacgtgccaggctctgtgcaaggtgctgggtacacagaagtgaatgccgacaatggtcATGATAACAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23602 192 - 2515279 GACAGAGGTTCGGGCTGACAGCACCGTCTGCA----CCACGC-----------------TGGGCGAGCTCCCGTGTGC-GGACACCGTCACTCCTCCGCTAGC--------TCACTCCTTCTTCCGTGCACTGGATTCTGTCAGCC-AGGGTTCccacgtgccaggctccgtgcaaggtgctgggtacacagaagtgaatgctgacaatggtcATGATAACAG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 7978 195 + 9146 GACAGAGATTGAGATTGAGAGCTCAGGCTGCATCATTCATGA-----------------TGGGCAACGTCTCCTGGGCAGGGCACCATCAGTCACCCACTCAC--------TCACTTATTCTTGCAATCACTGGACTCTGTCAACTGAGGGTTCccatgtgccaggccctgtgcaaggtgctgggtacacagaactgaaTGCTCACATTGTTC---ATAATAG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390227 198 - 2125214 GTCAGAGATTGGGACTGAGAGCACAGGCTTCATCATTCATGA-----------------TGGGTGAGCTCTCCTGGGCAGGGCACTGtcactcaccctctcac--------tcacttattcctgcaatcactGGACTCTGTCAACTGGGGGTTCccacatgccaggccctatgcaaggtgctgggtacacagaagtgaaTGCTGACAATGTTCATGATAATAG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2099853 208 - 8137123 GGCAGAGATTGGGCCAGAGAGCACAAGCCCCA----GCAGGCGGGGTCTAAGCCTGCAGTAGGCCAGCCCCTGTGTCTAGGGCACCATCACTCACTCACTTAT--------TCACTCTttcattctt---ttggcctgtgttaactgagagctcccatatgccaggccctgggtgaagcactggatacatagaagcaaacgaTGCCAGTGCCAGTGGTGCTCA i otoGar3.GL873611 I 167 C 0 e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=2743.000000 s hg38.chr7_KI270899v1_alt 37721 3 + 190869 ggc- s rheMac8.chr3 33900341 3 + 185818997 CGC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33516305 3 + 192294377 CGC- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4278081 3 - 9440265 CAC- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16867024 3 - 21915920 cgc- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 7453 3 - 21531802 CGC- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23794 3 - 2515279 CGC- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 8173 3 + 9146 TGC- i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390425 3 - 2125214 TGC- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100061 3 - 8137123 -GTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e nomLeu3.chr20 64397 3 + 85365473 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=118040.000000 s hg38.chr7_KI270899v1_alt 37724 50 + 190869 ttacCATGTGCGATGCTCTAAGACTAACACACTTCACATCTAGGCACTCA s nomLeu3.chr20 64400 50 + 85365473 ttacCGTGTGCGATGCTCTAAGACTAACACACTTCACATCTAGGCACTCA i nomLeu3.chr20 I 3 C 0 s rheMac8.chr3 33900344 50 + 185818997 TTACCACGTGCGATGCTCTAAGACTAACACACTTCACATCTAGACACTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33516308 50 + 192294377 TTACCACGTGTGATGCTCTAAGACTAACACACTTCACATCTAGACACTCA i macFas5.chr3 C 0 T 59 s macNem1.NW_012019910v1 4278084 50 - 9440265 TTACCATGTGCGATGCTCTAAGACTAACACACTTCACATCTAGACACTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16867027 50 - 21915920 ttaccatgtgcgatgctctaagactaacacacttcacatctagacactca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 7456 50 - 21531802 TTACCATGTGCGATGCTCTAAGACTAACACACTTAACATCTAGACACTCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23797 50 - 2515279 TTACCATGTGCAATGCTCTAAGACTAACACACTTGACATCTAGACACTCA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 8176 23 + 9146 TTACCATGTGAACTGCTGTAAGA--------------------------- i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390428 23 - 2125214 TTACCATGTGAACTGCTGTAAGA--------------------------- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100064 13 - 8137123 ATAGCATGTATTA------------------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=584.000000 s hg38.chr7_KI270899v1_alt 37774 3 + 190869 CAA s nomLeu3.chr20 64450 3 + 85365473 CAA i nomLeu3.chr20 C 0 T 56 s macFas5.chr3 33516299 3 + 192294377 TAA i macFas5.chr3 T 59 C 0 e otoGar3.GL873611 2100077 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 7506 0 - 21531802 C e manLeu1.NW_012101810v1 23847 0 - 2515279 C e cerAty1.NW_012002954v1 16867077 0 - 21915920 C e macNem1.NW_012019910v1 4278134 0 - 9440265 C e rheMac8.chr3 33900394 0 + 185818997 C e cebCap1.NW_016107703v1 390451 0 - 2125214 C e calJac3.chrUn_GL286443 8199 0 + 9146 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=160.000000 s hg38.chr7_KI270899v1_alt 37777 3 + 190869 TAG s macFas5.chr3 33516302 3 + 192294377 CAG i macFas5.chr3 C 0 C 0 e otoGar3.GL873611 2100077 0 - 8137123 C e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 7506 0 - 21531802 C e manLeu1.NW_012101810v1 23847 0 - 2515279 C e cerAty1.NW_012002954v1 16867077 0 - 21915920 C e macNem1.NW_012019910v1 4278134 0 - 9440265 C e rheMac8.chr3 33900394 0 + 185818997 C e cebCap1.NW_016107703v1 390451 0 - 2125214 C e calJac3.chrUn_GL286443 8199 0 + 9146 C e nomLeu3.chr20 64453 56 + 85365473 T e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=24206.000000 s hg38.chr7_KI270899v1_alt 37780 52 + 190869 TGCTTACCACGTGCAATGCTCTAAGGCTAACACACTTCACATCTAGGCACTC s nomLeu3.chr20 64397 52 + 85365473 tgcttacCGTGTGCGATGCTCTAAGACTAACACACTTCACATCTAGGCACTC i nomLeu3.chr20 T 56 C 0 s macFas5.chr3 33516305 52 + 192294377 CGCTTACCACGTGTGATGCTCTAAGACTAACACACTTCACATCTAGACACTC i macFas5.chr3 C 0 I 1 s calJac3.chrUn_GL286443 8199 34 + 9146 ---TGAACAC---------------ACTACAAAGCTTCACATCTAAGTACTC i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390451 34 - 2125214 ---TGAACAC---------------ACTATAAATCTTCACATCTAAGCACTC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100077 40 - 8137123 ------------GCAATGTTCTAAGTCTAGGAGACTTCACGTCAGCGCACTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 7506 0 - 21531802 C e manLeu1.NW_012101810v1 23847 0 - 2515279 C e cerAty1.NW_012002954v1 16867077 0 - 21915920 C e macNem1.NW_012019910v1 4278134 0 - 9440265 C e rheMac8.chr3 33900394 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=54.000000 s hg38.chr7_KI270899v1_alt 37832 1 + 190869 T s nomLeu3.chr20 64449 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 8233 1 + 9146 A i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390485 1 - 2125214 A i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100117 1 - 8137123 A i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e chlSab2.chr28 7506 0 - 21531802 C e manLeu1.NW_012101810v1 23847 0 - 2515279 C e cerAty1.NW_012002954v1 16867077 0 - 21915920 C e macNem1.NW_012019910v1 4278134 0 - 9440265 C e macFas5.chr3 33516357 1 + 192294377 I e rheMac8.chr3 33900394 0 + 185818997 C e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=803122.000000 s hg38.chr7_KI270899v1_alt 37833 244 + 190869 CAAACACACAGCTGTGCTCATTCAATCCCCTTCACAGCCCCAAAGGCAGGCACCACGTTA-CCCATCTGACTGATGGCAGCAACTTGCT--------CACACTAACGAATGCCTAACGAGCTGGGGTTTCCTTCCTCGCAGGGCTCACACTCCTACAGGGAAAAG-AAACAAAAAGCATGAGAAATAAAAACTGGAAATGAAGAAAATAAAACCAGGTGGGAGGAC-------------AGGCAATTGCAGAAGGGGAGGTGGGGGG-- s nomLeu3.chr20 64450 252 + 85365473 CAAACACGCAGCTATGctgattcaatccccttcacagccccaaaggcaggcaccacgtta-cccatctgactgatggcagcaacttgctgaaggtcacacactaatgaatgcctaacgagctggggttttcttccttgcagggctcacagtccCATAGGGAAAAT-AAACAAAAAGCATGAGAAACAAAAGCTGGAAATGAAGAAAATAAAACCGGGTGGGAGGAC-------------AGGCATTTGCAGAAAGGGAGGTGGGGGG-- i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 33900394 233 + 185818997 CAAACATGCAGCTGTGctcattcaat-cccatcacagccccaaaggcaggcaccacatta-ctcatctgactgatggtggcaacttgctcgaggtcacacactagtcaatgtctcatgagctgaggttTCCTTCCTCACAGGGCTCACACGTCTACAGGGAAAAT-AAACAAAAAACATGAGAAATAAAAACTGGATATGAA------------------GAGGAC-------------GGGCAGTTGCAGAAAGGGAGGTGGGGGG-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33516358 233 + 192294377 CAAACATGCAGCTGTGctcattcaat-cccatcacagccccaaaggcaggcaccacatta-ctcatctgactgatggtggcaacttgctcgaggtcacacactagtcaatgtctcatgagctgaggttTCCTTCCTCACAGGGCTCACACGTCTACAGGGAAAAT-AAACAAAAAACATGAGAAATAAAAACTGGATATGAA------------------GAGGAC-------------GGGCAGTTGCAGAAAGGGAGGTGGGGGG-- i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4278134 233 - 9440265 CAAacatgcagctgtgctcattcaat-cccatcacagccccaaaggcaggcaccacatta-ctcatctgactgatggtggcaacttgctcaaggtcacacactagtcaatgtctcatgagctgaggttTCCTTCCTCACAGGGCTCACACGTCTACAGGGAAAAT-AAACAAAAAACATGAGAAATAAAAACTGGATATGAA------------------GAGGAC-------------GGGCAGTTGCAGAAAGGGAGGTGGGGGG-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16867077 234 - 21915920 caaacatgcagctgtgctcattcaat-cccatcacagccccaaaggcaggcaccacatta-cccatctgacggatggtggcaacttgctcgaggtcacacactagtcaatgtctcacgagctggggttTCCTTCCTCACAGGGCTCACACGTCTACAGGGAAAATAAAAAAAAAAACATGAGAAATAAAAACTGGATATGAA------------------GAGGAC-------------GGGCAGTTGCAGAAAGGGAGGTGGGGCG-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 7506 232 - 21531802 CAAacatgcagctgtgctcattcaat-cccttcacagccccaaaggcaggcaccacgtta-cccatctgactgatggtggcaacttgctcgaggtcacacactagtcaatgtctcac-agctggggttTCCTTCCTCACAGGGCTCACACGTCTACAGGGAAAAT-AAACAAAAAACATGAGAAATAAAAACTGGATATGAA------------------GAGGAC-------------AGGCAGTTGCAGAAAGGGAGGTGGGGGG-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 23847 233 - 2515279 CAAacatgcagctgtgctcattcaat-cccatcacagccccaaaggcaggcaccacatta-cccatctgactgatggtggcaacttgctcgaggtcacacactagtcaatgtctcacgagctggggttTCCTTCCTCACAGGGCTCACACGTCTACAGGGAAAAT-AAACAAAAAACATGAGAAATAAAAACTGGATATGAA------------------GAGGAC-------------GGGCAGTTGCAGAAAGGGAGGTGGGGCG-- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 8234 226 + 9146 CAAACATGCAGCTGTGGTCATTCAATACCCATCACAGCCCACAAGGCAGGCACAGTGTCACCCCATCTGACCAATGGCGGCAACTTACTCAAGATCACATGCTAGTCAATACCTAGTGAGCTGGAGCTTCCTCCCTCACAGGGCTCACA---------------------------CATGAGAAGTAAAAACTGGATACGAAGAACATAAAATGGGGTGGGAGGAC-------------AGAGAATTATAGAAAGGGAGATGGAGG--- i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390486 226 - 2125214 CAAACATGCAGCTGTGGCCATTCAATCCCCATCACAGCCCACAAGGCAGGCACCATGTCACCCCATCTGACCAACGACAGCAACTTACTCAAGATCACATGCTAGTCAATACCTGATGAGCTGGGGCTTCCTCCCTCACAGGGCTCACA---------------------------CATAAGAAGTAAAAACTGGATATGAAGAACATAAAATGGGGTGGGAGGAC-------------AGGGAATTATAGAAAGGGAGATGGAGG--- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100118 243 - 8137123 TGAACATGCAGCTGAGCT---------CCCGCAGCGGCCCCACAGGTAGGCACTACGCTTCCCCATCTG-------------ACTTGCCTAAGGTGATTTGCTAATCAGTACCTGAAGAGCTGGGGTTTCTGACCTCATGGGGCTCATG-TTCTACAGGGAAAAT-AAATAGAG--CATGAGAAATAAAAACTGGAAATGAGGAAAATAAACTAGAATGAGAGGACATTCTAGGGCTCTAGGAAGTTGCAGATAGGAAGGTCGTGGTGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I e gorGor5.CYUI01015914v1 1256 9 - 432965 I a score=293385.000000 s hg38.chr7_KI270899v1_alt 38077 60 + 190869 TGACAGGCAAACCAGGAACTGAGTCATGGAAA-TGA-CCCTGTAGTCCTGCGGGGCAGTGCA s gorGor5.CYUI01015914v1 1265 60 - 432965 TGACAGGCAAACCAGGAACGGAGTCATGGAAA-TGA-CCCTGTAGTCCTGCGGGACAGTGCA i gorGor5.CYUI01015914v1 I 9 C 0 s nomLeu3.chr20 64703 60 + 85365473 TGACATGCAAACCAGGAACTGAGTCATGGAAA-TGA-CCCTATAGTCCTGTGAGAGAGTGCA i nomLeu3.chr20 I 1 C 0 s rheMac8.chr3 33900627 60 + 185818997 TGACATGCAAACCAGGAACTGAGTCACGGAAA-TGA-CCCTACAGTCCTGTGGGAGAGTGCC i rheMac8.chr3 C 0 I 270 s macFas5.chr3 33516591 60 + 192294377 TGACATGCAAACCAGGAACTGAGTCACGGAAA-TGA-CCCTACAGTCCTGTGGGAGAGTGCC i macFas5.chr3 C 0 I 270 s macNem1.NW_012019910v1 4278367 60 - 9440265 TGACATGCAAACCAGGAACTGAGTCACGGAAA-TGA-CCCTACAGTCCTGTGGGAGAGTGCC i macNem1.NW_012019910v1 C 0 I 211 s cerAty1.NW_012002954v1 16867311 60 - 21915920 TGACATGCAAACCAGGAACTGAGTCACGGAAA-TGA-CCCTACAGTCCTGTGGGAGAGTGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 7738 60 - 21531802 TGACATGCAAACCAGGAACTGAGTCATGGAAA-TGA-CCCTACAGTCCTGTGGGAGAGTGCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 24080 60 - 2515279 TGACATGCAAACCAGGAACTGAGTCACGGAAA-TGA-CCCTACAGTCCTGTGGGAGAGTGCC i manLeu1.NW_012101810v1 C 0 I 194 s calJac3.chrUn_GL286443 8460 61 + 9146 TGACATGCAATCCTGGAACTGAGTCATGGAAA-TGACCCCTGCCATCCTGTGGGAGAGTGCA i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390712 61 - 2125214 TGACATGCAATCCAAGAACTGAGTCATGGAAA-TGACCCCTGCAGTCCTGTGGGAGAGTGCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100361 60 - 8137123 TGATAGGCAAACCAGGACCAGAGTCACGGAAGCCCA-TGCTACAGTCCTGTGGG-GCGTGCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I a score=31229.000000 s hg38.chr7_KI270899v1_alt 38137 6 + 190869 CCTGAG s gorGor5.CYUI01015914v1 1325 6 - 432965 CCTGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 64763 6 + 85365473 CCTGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33900957 6 + 185818997 CCTGAG i rheMac8.chr3 I 270 C 0 s macFas5.chr3 33516921 6 + 192294377 CCTGAG i macFas5.chr3 I 270 C 0 s macNem1.NW_012019910v1 4278638 6 - 9440265 CCTGAG i macNem1.NW_012019910v1 I 211 C 0 s cerAty1.NW_012002954v1 16867371 6 - 21915920 CCTGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 7798 6 - 21531802 CCTGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 24334 6 - 2515279 CCTGAG i manLeu1.NW_012101810v1 I 194 C 0 s calJac3.chrUn_GL286443 8521 6 + 9146 CCTGAG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390773 6 - 2125214 CCTGAG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100421 6 - 8137123 GCAGTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60957680 11 - 77573801 I a score=130429.000000 s hg38.chr7_KI270899v1_alt 38143 22 + 190869 CCCAGGCTGGAG-GGCAAGGAGC s gorGor5.CYUI01015914v1 1331 22 - 432965 CCCAGGCTGGAG-GGCAAGGAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 64769 22 + 85365473 CCCAAGCTGGAG-GGCAAGGAGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33900963 22 + 185818997 CCCAGGCTGGAG-GACAAGGAGC i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33516927 22 + 192294377 CCCAGGCTGGAG-GACAAGGAGC i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4278644 22 - 9440265 CCCAGGCTGGAG-GACAAGGAGC i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16867377 22 - 21915920 CCCAGGCTGGAG-GGCAAGGAGC i cerAty1.NW_012002954v1 C 0 I 154 s chlSab2.chr28 7804 22 - 21531802 CCCAGGCTGGAG-GACAAGGAGC i chlSab2.chr28 C 0 I 136 s manLeu1.NW_012101810v1 24340 22 - 2515279 CCCAGGCTGGAG-GACAAGGAGC i manLeu1.NW_012101810v1 C 0 I 1 s calJac3.chrUn_GL286443 8527 22 + 9146 CCCAGGCTGCAG-GGCAAGGAGC i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390779 22 - 2125214 CCCAGGCTGGAG-GGCAAGGAGC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100427 22 - 8137123 CCCAGGTCAGAG-GGCGCCAGGC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60957691 23 - 77573801 CCCAGGCCTGAGCAGGAAGGAGC i canFam3.chr6 I 11 C 0 a score=1911.000000 s hg38.chr7_KI270899v1_alt 38165 1 + 190869 T s gorGor5.CYUI01015914v1 1353 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 64791 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286443 8549 1 + 9146 T i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390801 1 - 2125214 T i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100449 1 - 8137123 T i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60957714 1 - 77573801 T i canFam3.chr6 C 0 C 0 e chlSab2.chr28 7826 136 - 21531802 I e manLeu1.NW_012101810v1 24362 1 - 2515279 I e cerAty1.NW_012002954v1 16867399 154 - 21915920 I e macNem1.NW_012019910v1 4278666 1 - 9440265 I e macFas5.chr3 33516949 1 + 192294377 I e rheMac8.chr3 33900985 1 + 185818997 I a score=28478.000000 s hg38.chr7_KI270899v1_alt 38166 7 + 190869 GGGTGTA s gorGor5.CYUI01015914v1 1354 7 - 432965 GGGTGTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 64792 7 + 85365473 GGGTGTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33900986 7 + 185818997 GGGTGTG i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33516950 7 + 192294377 GGGTGTG i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4278667 7 - 9440265 GGGTGTG i macNem1.NW_012019910v1 I 1 C 0 s chlSab2.chr28 7962 7 - 21531802 GGGTGTG i chlSab2.chr28 I 136 C 0 s manLeu1.NW_012101810v1 24363 7 - 2515279 GGGTGTG i manLeu1.NW_012101810v1 I 1 C 0 s calJac3.chrUn_GL286443 8550 7 + 9146 GCATGTA i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390802 7 - 2125214 GGATGTA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100450 7 - 8137123 GCATATA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60957715 7 - 77573801 GGGTGGA i canFam3.chr6 C 0 C 0 e cerAty1.NW_012002954v1 16867399 154 - 21915920 I a score=1191286.000000 s hg38.chr7_KI270899v1_alt 38173 260 + 190869 TCAAGGCAGTGAGTGGT-CAGGCCCACAGACGTGA---GAAGCAGGGATGG-GAGAA-CTT-------GAGACAGGAGACCAGCAAGGGAAAGACAGGCCCACACAGGCAAGGCCCACACAGGA-AGGCCCACATGTGGCTGGTGTCTCTGCCATGAACTACCTTCTGCCAGGCTTCCTTGACCAC------CCCACAAGCCTCCCTGAGGCCAGGGCCACATCCAGAAACTTCACAGAGAGC--------TACACCCTTCACACTGCTGTTTTAACTTAACAAGCTG s gorGor5.CYUI01015914v1 1361 260 - 432965 TCAAAGCAGTGAGTGGT-CAGGCCCACAGACGTGA---GAAGCAGGGATGG-GAGAA-CTT-------GAGACAGGAGACCAGCAAGGGAAAGACAGGCCCACACAGGCAAGGCCCACACAGGA-AGGCCCACATGTGGCTGGTGTCTCTGCCATGAACTACCTTCTGCCAGGCTTCCTTGACCAC------CCCACAAGCCTCCCTGAGGCCAGGGCCACATCCAGAAACTTCACAGAGAGC--------TACACCCTTCACACTGCTGTTTTAACTTAACAAGCTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 64799 260 + 85365473 TCAAAGCAGTGAGTGGT-CAGCCCCACAGACGTGA---GGAGCAGGGATGG-GAGAA-CTT-------GAGACGGGAGACCAGCAAGGGAAAGACAGGCCCACACAGGCAAGGCCCACACAGGA-AGGCCCACATGTGGCTGGTGTCTCTGCCATGAACTACCTTCTGCCAGGCTTCCTGGACCAC------CCCACAAGCCTCCCTGAGGCCAGGGCCACATCCAGAAACTTCACAGAGAGC--------TACACCCTTCACGCTGCTGTTTTAACTTAACAAGCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33900993 232 + 185818997 TCAAAGCAGGGAGTGGT-CAGTCCCACAGACGTGATGAGGAGCAGGGATGG-CAGCA-CTT-------GAGACAGGAGACCAGCAAGGGAAAGA---------ACAGG------CCACACAGGA-AGGCCCACGTGTGACTGGTGT----------------CTTCTACCAGGCTTCCTTGACCAC------CTCACAAGCCTCCCTGAGGCCAGGGCCACATCCAGAAACTTCACAGAGAAC--------TTCACCCTTCACACTGCTGTTTTAACTTAACAAGCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33516957 232 + 192294377 TCAAAGCAGGGAGTGGT-CAGTCCCACAGACGTGATGAGGAGCAGGGATGG-CAGCA-CTT-------GAGACAGGAGACCAGCAAGGGAAAGA---------ACAGG------CCACACAGGA-AGGCCCACGTGTGACTGGTGT----------------CTTCTACCAGGCTTCCTTGACCAC------CTCACAAGCCTCCCTGAGGCCAGGGCCACATCCAGAAACTTCACAGAGAAC--------TTCACCCTTCACACTGCTGTTTTAACTTAACAAGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4278674 232 - 9440265 TCAAAGCAGGGAGTGGT-CAGTCCCACAGACGTGATGAGGAGCAGGGATGG-CAGCA-CTT-------GAGACAGGAGACCAGCAAGGGAAAGA---------ACAGG------CCACACAGGA-AGGCCCACGTGTGACTGGTGT----------------CTTCTACCAGGCTTCCTTGACCAC------CTCACAAGCCTCCCTGAGGCCAGGGCCACATCCAGAAACTTCACAGAGAAC--------TTCACCCTTCACACTGCTGTTTTAACTTAACAAGCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16867553 248 - 21915920 TCAAAGCAGGGAGTGGT-CAGTCCCACAGACGTGATGAGGAGCAGGGATGG-CAGCA-CTT-------GAGACAGGAGACCAGCAAGGGAAAGA---------ACAGG------CCACACAGGA-AGCCCCACATGTGACTGGTGTCTTCACCATGAACCACCTTCTACCAGGCTTCCTTGACCAC------CTCACAAGCCTCCCTGAGGCCAGGGCCACATCCAGAAACTTCACAGAGAAC--------TTCACCCTTCATGCTGCTGTTTTAACTTAACAAGCTG i cerAty1.NW_012002954v1 I 154 C 0 s chlSab2.chr28 7969 245 - 21531802 TCAAAGCAGGGAGTGGT-CGGTCCCACAGACGTGAT---GAGCAGGCATGG-CAGCA-CTT-------GAGACAGGAGACCAGCAAGGGAAAGA---------ACAGG------CCACACAGGA-AGGCCCACGTGTGACTGGTGTCTTCACCATGAACCACCTTCTACCAGGCTTCCTTGACCAC------CTCACAAGCCTCCCTGAGGCCAGGACTACATCCAGAAACTTCACAGAGAAC--------TTCGCCCTTCACGCTGCTGTTTTAACTTAACAAGCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 24370 248 - 2515279 TCAAAGCAGGGAGTGGT-CAGTCCCACAGACGTGATGAGGAGCAGGGATGG-CAGCA-CTT-------GAGACAGGAGACCAGCAAGGGAAAGA---------ACAGG------CCACACAGGA-AGGCCTACGTGTGACTGGTGTCTTCACCATGAACCACCTTCTACCAGGCTTCCTTGACCAC------CTCACAAGCCTCCCTGAGGCCAGGGCCACATCCAGAAACTTCACAGAGAAC--------TTCACCCTTCACGCTGCTGTTTTAACTTAACAAGCTG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 8557 252 + 9146 TCAAAGCAGTGAGTGGT-CAGCCCCACAGATGTGC---GGAGCAGGGATGG-GAGCA-CTTGAGATGGGAGACAGGAAACTAGCAAGGGAAAG----------ATAGG-----CCCATACAGGA-AGGCCCATGTGTGGCTGCTGTCTCCATCATAAGCCACCCTCAACCAGGCTTCCTTGACCAC------TCCATAAGTCTTCCTGAGGCCAGGGCCACATTCAGAAACTTCACAGAGAGC--------TACACCCTGCATACTGGTGTTCTAACTTAACAAGCTG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 390809 252 - 2125214 TCAAAGCAGTGAGTGGT-CCGCCCCACAGATGTGA---GGAGCAGGGATTG-GAGCA-CTTGAGATGGGAGACAGGAAACTAGCAAAGGAAAG----------ATAGG-----CCCATACAGGA-AGGCCCATGTGTGGCTGCTGTCTCCATGATTAGCCACCTTCTACCAGGCTTCCTTAACCAC------TCCATAAGCCTTCCTGAGGCCAGGGCCACATTCAGAAACTTTACAGAGAGT--------AACACCCTGCATACTGGTGTTCTAACTTAACCAGCTG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2100457 248 - 8137123 TCAAAGGGGTTAGCTGT-CAGCCCCACAGACATGA---GGAGCAGGGTAGG-GAGTACCCT-------GAAAGAGGAAACT---AAGAGCAGG----------ATAGA-----CCCACACAGGAGGGGCCCACGCATGGCCAGTATCTCTGTCATGGACCACCCTCTGCTGAGTTTCTTTGACCACATGAAGTCCATGAGCCTTTCT--GGCCAAAGCCATGTTCAGAAACCCCACAGGGCGC--------TATACCCTTCACTCTGCTGTTCTAATTTAACAAGCTG i otoGar3.GL873611 C 0 I 1026 s canFam3.chr6 60957722 246 - 77573801 -CAGAGGGGTCCGCAGTGCTGCCCCACAGACGTGA---GAAGCAGGGGTAGTCAGTG-CTC------CAAGATAGGAAACTGCCA----CAAGA---------ACAGG-----CCCATCCAGAT-----------GAGGCTGACCTCTCTGTCATGACCC--CTCTTGGTGGGCCTCCTGGACCACAATGGGTCCATGAGCCTCCTTGAGGCCGTTGTTATGTCCAGAAACCCCACAGAAAATGACTCCTGTATGCCCAGGCCTCTGCTGCTTTAGCTCAATGAGCTA i canFam3.chr6 C 0 C 0 a score=55485.000000 s hg38.chr7_KI270899v1_alt 38433 11 + 190869 TAGTTTGAAAG s gorGor5.CYUI01015914v1 1621 11 - 432965 TAGTTTGAAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 65059 11 + 85365473 TGGTGTGAAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33901225 11 + 185818997 TGGTGTGAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33517189 11 + 192294377 TGGTGTGAAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4278906 11 - 9440265 TGGTGTGAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16867801 11 - 21915920 TGGTGTGAAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 8214 11 - 21531802 TGGTGTGAAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 24618 11 - 2515279 TGGTGTGAAAG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 8809 11 + 9146 TGGTGTGAAAG i calJac3.chrUn_GL286443 C 0 C 0 s cebCap1.NW_016107703v1 391061 11 - 2125214 TGGTGTGAAAG i cebCap1.NW_016107703v1 C 0 I 4 s canFam3.chr6 60957968 11 - 77573801 TAGTGTGAAAC i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I a score=22833.000000 s hg38.chr7_KI270899v1_alt 38444 5 + 190869 AGAAC s gorGor5.CYUI01015914v1 1632 5 - 432965 GGAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 65070 5 + 85365473 GGAAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33901236 5 + 185818997 GGAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33517200 5 + 192294377 GGAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4278917 5 - 9440265 GGAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16867812 5 - 21915920 GGAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 8225 5 - 21531802 GGAAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 24629 5 - 2515279 GGAAC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 8820 5 + 9146 GGAAC i calJac3.chrUn_GL286443 C 0 C 0 s canFam3.chr6 60957979 5 - 77573801 AGAAT i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e cebCap1.NW_016107703v1 391072 4 - 2125214 I a score=547584.000000 s hg38.chr7_KI270899v1_alt 38449 148 + 190869 TCAGCAAAGCACTCGTGTAATTTCATTAACTTTCTCTCATCTTCTCAGCTGGGCATCTGCAGTTAATAATGTGCATTTGAGGAAAGAAAAATAAAAGGCATCAAAGGCCAGGTTAGAGACAGGG-CAGGGACG--GGAGCTCTAGGCCAGT s gorGor5.CYUI01015914v1 1637 148 - 432965 TCAGCAAAGCACTCATGTAATTTCATTAACTTTCTCTCATCTTCTCAGCTGGGCATCTGCAGTTAATAATGTGCATTTGAGGAAAGAAAAATAAAAGGCATCAAAGGCCAAGTTAGAGACAGGG-CAGGGACG--GGAGCTCTAGGCCAGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 65075 145 + 85365473 TCAGCAAAGCATTCGTGTAATTTCATTAACTT--TCTCATCTTCTCAGCTGGGCATCTGCAGTTAATAATGTGCGTTTGAGGAAAGAAAAATAAAAGGCATCAAAGGCCAGGTT-GAGACAGGG-CAGGGACG--GGAGCTCTAGGCCAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33901241 148 + 185818997 TCAGCAAAGCATTCGTGTAATTTCATTAACTTTCTCTCATCTTCTCAGCTGGGCATCTGCAGTTAATAATGTGCATTTGAGGAAAGAAAAATAAAAGGCATCAAAGGCCAAGTTAGAGACAGGG-CAGGGACG--GGAGCTCTAGGCCAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33517205 148 + 192294377 TCAGCAAAGCATTCGTGTAATTTCATTAACTTTCTCTCATCTTCTCAGCTGGGCATCTGCAGTTAATAATGTGCATTTGAGGAAAGAAAAATAAAAGGCATCAAAGGCCAAGTTAGAGACAGGG-CAGGGACG--GGAGCTCTAGGCCAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4278922 148 - 9440265 TCAGCAAAGCATTCGTGTAATTTCATTAACTTTCTCTCATCTTCTCAGCTGGGCATCTGCAGTTAACAATGTGCGTTTGAGGAAAGAAAAATAAAAGGCATCAAAGGCCAAGTTAGAGACAGGG-CAGGGACG--GGAGCCCTAGGCCAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16867817 148 - 21915920 TCAGCAAAGCATTCGTGTAATTTCATTAACTTTCTCTCATCTTCTCAGCTGGGCATCTGCAGTTAATAATGTGCGTTTGAGGAAAGAAAAATAAAAGGCATCAAAGGCCAAGTTAGAGACAGGG-CAGGGACG--GGAGCTCTAGGCCAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 8230 148 - 21531802 TCAGCAAAGCATTCGTGTAATTTCATTAACTTTCTCTCATCTTCTCAGCTGGGCATCTGCAGTTAATAATGTGCGTTTGAGGAAAGAAAAATAAAAGGCATCAAAGGCCAAGTTAGAGACAGGG-CAGGGACG--GGAGCTCTAGGCCAGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 24634 148 - 2515279 TCAGCAAAGCATTCGTGTAATTTCATTAACTTTCTCTCATCTTCTCAGCTGGGCATCTGCAGTTAATAATGTGCGTTTGAGGAAAGAAAAATAAAAGGCATCAAAGGCCAAGTTAGAGACAGGG-CAGGGACG--GGAGCTCTAGGCCAGT i manLeu1.NW_012101810v1 C 0 C 0 s canFam3.chr6 60957984 142 - 77573801 TCAGCAAAGCAAGCATGTGATCTCATTCCCCTTCTCTCTTCTTCTCAGCTGGGAGTCTGCAGCTGACAATGTGCATCTGAAGGAAGACAAAGA---------AAAGACTAAGTCAGAGGCAGGGCCAGGGATGCCAGGGGTCCAAACAAGT i canFam3.chr6 C 0 I 1313 e otoGar3.GL873611 2100705 1026 - 8137123 I e cebCap1.NW_016107703v1 391072 4 - 2125214 I e calJac3.chrUn_GL286443 8825 0 + 9146 C a score=156392.000000 s hg38.chr7_KI270899v1_alt 38597 53 + 190869 GGGTTGTGTTTTTCTGACGTGTGCTCCAGCTGCTGTCAGCTGACTCTAGCCAG s gorGor5.CYUI01015914v1 1785 53 - 432965 GGGTTGTGTTTTTCTGACGTGTGCTCCAGCTGCTGTCAGCTGACTCTAGCCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 65220 52 + 85365473 GGGTTGTG-TTTTCTGACGTGCGCTCCAGCTGCTGTCAGCTGACTGTAGCCGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33901389 53 + 185818997 GGATTGTGTTTCTCTGACGTGTGCTCCAGCTAATGTCGGCTGACTCCAGCCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33517353 53 + 192294377 GGATTGTGTTTCTCTGACGTGTGCTCCAGCTAATGTCGGCTGACTCCAGCCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4279070 53 - 9440265 GGATTGTGTTTCTCTGACGTGTGCTCCAGCTAATGTCGGCTGACTCCAGCCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16867965 53 - 21915920 GGATTGTGTTTCTCTGACGTGTGCTCCAGCTGATGTCGGCTGACTCCAGCCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 8378 53 - 21531802 GGATTGTGTTTCTCTGACGTGTGCTCCAGCTGATGTCGGCTGACGCCAGTCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 24782 53 - 2515279 GGATTGTGTTTCTCTGACGTGTGCCCCAGCTGATGTCGGCTGACTCCAGCCAG i manLeu1.NW_012101810v1 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cebCap1.NW_016107703v1 391072 4 - 2125214 I e calJac3.chrUn_GL286443 8825 0 + 9146 C a score=1110039.000000 s hg38.chr7_KI270899v1_alt 38650 250 + 190869 TCCCCAGGCCCCGACTCAGGTGCCACCTGGTTGAGGACCTCCAGGGAGTCCTGCTGTGAACGAAAACCCATTGTGATAGGGGCATGCATCCCCTTTGCCACCCCCTCCTCACACACCTGCTTTGGGTTGGGGGTGTG----TCTCCTGCTGAACCACAGCACTGCCCCATTTTGGGTAGGACAAGTTCATTTCCATCTTGGAAGAATAGTCCACTCACCAAGGTGTTTGGCAGCTACATATAAACAGAACTTTC s gorGor5.CYUI01015914v1 1838 254 - 432965 TCCCCAGGCCCCGATTCAGGTGCCACCTGGTTGAGGACCTCCGGGGAGTCCTGCTGTGAATGAAAACCCACTGTGATAGGGGCATGCATCCCCTTTGCCGCCCCCTCCTCACACACCTGCTTTGGGTTGGGGGTGTGACAGTCTCCTGCTGAGCCACAGCACTACCCCATTTTGGGTGGGACAAGTTCGTTTCCATCTTGGAAGAATAGTCCACTCACCAAGGTGTTTGGCAGCTACATATAAACAGAACTTTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 65272 254 + 85365473 TCCCCAGGCCCTGACTCAGGTGCCACCTGGCTGAGGACCTCCAGGGAGTCCTGCTGTGAATGAAAACCCATTGTGATAGGGGCATGCGTCCCCTTTGCCACCCCCTCCTCACACAGCTGCTTTGGGTCGGGGGCATGACAGCCTCCTGCTGAACCACAGCCCTGCCCCGTTTTGGGTGGGACAAGTCTGTTTCCATCTTGGAAGAACCGTCCACTCACCAAGGCATTTGGCAGCTACATACAAACAGAACTTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33901442 254 + 185818997 TCCCCAGGCCCCTACTCAGGGGCCACCTGGTTGAGGACCTCCAGGGAGTCCTACTGTGAATGGAAACTCATCGGGATGGGGGCCTGCATCCCCTTTGCTGCCCGCTCCTCACACACCTGCTTTGGGTTGGGGGCGTGACAGTCTCCTGCTGAGCCCCAGCGCTGCCCCATTTTGGGTGGGACAAGTTCCTTCCCGGCTTGGAGGAATAGTCCACACACCAAGGTGTTTGGCAGCTACGTATAAACAGAACTTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33517406 254 + 192294377 TCCCCAGGCCCCTACTCAGGGGCCACCTGGTTGAGGACCTCCAGGGAGTCCTACTGTGAATGGAAACTCATCGGGATGGGGGCCTGCATCCCCTTTGCTGCCCGCTCCTCACACACCTGCTTTGGGTTGGGGGCGTGACAGTCTCCTGCTGAGCCCCAGCGCTGCCCCATTTTGGGTGGGACAAGTTCCTTCCCGGCTTGGAGGAATAGTCCACACACCAAGGTGTTTGGCAGCTACGTATAAACAGAACTTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4279123 254 - 9440265 TCCCCAGGCCCCTATTCAGGGGCCACCTGGTTGAGGACCTCCAGGGAGTCCTGCTGTGAATGGAAACTCATCGGGATGGGGGCCTGCATCCCCTTTGCTGCCCGCTCCTCACACACCTGCTTTGGGTTGGGGGCATGACAGTCTCCTGCTGAGCCCCAGCGCTGCCCCATTTTGGGTGGGACAAGTTCCTTCCCGGCTTGGAGGAATAGTCCACACACCAAGGTGTTTGGCAGCTACGTATAAACAGAACTTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16868018 254 - 21915920 TCCCCAGGCCCCTACTCAGGGGCCACCTGGTTGAGGACCTCCAGGGAGTCCTGCTGTGAATGGAAACTCATCGGGATGGGGGCCTGCATCCCCTTTGCTGCCCGCTCCTCACACATCTGCTTTGGGTTGGGGGCGTGACAGTCTCCTGCTGAGCCCCAGCGCTGCCCCATTTTGGGTGGGACAAGTTCCTTCCCGGCTTGGAGGAATAGTCCACACACCAAGGTGTTTGGCAGCTACGTATAAACAGAACTTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 8431 254 - 21531802 TCCCCAGGTCCCTACTCAGGGGCCACTTGGTTGAGGACGTCCAGGGAGTCCTGCTGTGAATGGAAACCCATAGGGATGGGGGCCAGCATCCCCTTTGCTGCCCGCTCCTCACACACCTGCTTTGGGTTGGGGGCATGACAGTCTCCTGCTGAGCCCCAACGCTGCTCCATTTTGGGTGGGACAACTTCCTTCCCGGCTTGGAGGAATGGTCCACACACCAAGGTGTTTGGCAGCTACGTATAAAAAGAACTTTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 24835 254 - 2515279 TCCCCAGGCCCCTACTCAGGGGCCACCTGGTTGAGGACCTCCAGGGAGTCCTGCTGTGAATGGAAACTCATCGGGATGGGGGCCTGCATCCCCTTTGCTGCCCGCTCCTCACACACCTGCTTTGGGTTGGGGGCGTGACAGTCTCCTGCTGAGCCCCAGCGCTGCCCCATTTTGGGTGGGACAAGTTCCTTCCCGGCTTGGAGGAATAGTCCACACACCAAGGTGTTTGGCAGCTACGTATAAACAGAACTTTC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286443 8825 253 + 9146 TCCCCAGGCCCTGACTCAGGTACTACAT-GTTGAAGACCTAAAGGGAGTCCTGCTGTGACCAAAAACCCATCACGATGAGGGCATGCATCCCCTTTGCTGCCACCTCCTCACACACCTGCTTTGGGTTGCGGGCGTGACATTCTCCTGCTGAGCTCCAGCACTGACCTATTTCAGGTGGGACAAGTTATTTTCCATCTTAGAGAAATAGCCCACTCACCAAGGTGTTTGGCAGCTACATATAAACAGAACTTTC i calJac3.chrUn_GL286443 C 0 N 0 s cebCap1.NW_016107703v1 391076 253 - 2125214 TCCCCAGGCCCTGACTCAGGTACTACCT-GTTGAGGACCTCAAGGGAGTCCTGCTGTGAACGAAAACCCATCACCATGAGGGCATGCATCCCCTTTGCTGCCCCCTCCTCACACACCTGCTTTGGGTTGGGGGCGTGGCATTCTCCTGCTGAGCTCCAGCACTCCCCTATTTCAGGTGGGACAAGTTATTTTCCATCTTAGAGGAATTGCCTACTCACCAAGGTGTTTGGCAGCTACATATAAACAGAACTTTC i cebCap1.NW_016107703v1 I 4 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I a score=428140.000000 s hg38.chr7_KI270899v1_alt 38900 170 + 190869 AATGAAAGGTTGGAATGCTCATCCTGTCCCACTCCATGTGTGATAGCGTCTGGAACCCTTTCCAGCAGGTCTATTCAACATCAAT----ACAGCAATCTGGGCACACGTCTCGGCCCTGCCCTCACCCGGGGCTGTGGGCACAACTGGGATGCTCAGAGGTGGGCAGGCAAGTG s gorGor5.CYUI01015914v1 2092 170 - 432965 AATGAAAGGTTGGAATGCTCATCCTGTCCCACTCCATGTGTGATAGCATCTGGAACACTTTCCAGCAGGTCTATTCAACATCAAT----ACAGCAATCTGGGCACAAGTCTCAGCCCTGCCCTCACCCGGGGCTGTGGGCACAACTGGGATGCTCAGAGGTGGGCAGGCAGGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 65526 170 + 85365473 AGTGAAATGTTGGAATGCCCATCCTGTCCCACTCCATGTGTGATGGCGTCTGGAACCCTTTCCAGCAGGTCTACTCAACATCAGT----ACAGCAATCTGGGCACAAGTCTCGGCCCTGCCCTCACCCAGGGCTGTGGGCACATCTGGGATGCTCAGAGGTGGGCAGGCAGGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33901696 126 + 185818997 AGTGAAAGGCTGGAACGCTCATCCTGTCCCACTCCGTGTGTGACAATGTCTGGAGCCCTTTCCAGCAG-----------------------------------------------CCTGGCCTCACCCGGGGTGGC-GGCACCTCTGGGATGCTCAGAGGTGGGCAGGCAGGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33517660 126 + 192294377 AGTGAAAGGCTGGAACGCTCATCCTGTCCCACTCCGTGTGTGACAATGTCTGGAGCCCTTTCCAGCAG-----------------------------------------------CCTGGCCTCACCCAGGGCGGC-GGCACCTCTGGGATGCTCAGAGGTGGGCAGGCAGGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4279377 126 - 9440265 AGTGAAAGGCTGGAACGCTCATCCTGTCCCACTCCATGTGTGACAATGTCTGGAGCCCTTTCCAGCAG-----------------------------------------------CCTGGCCTCACCCGGGGCGGC-AGCACCTCTGAGATGCTCAGAGGTGGGCAGGCAGGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16868272 126 - 21915920 AGTGAAAGGCTGGAACGCTCATCCTGTCCCACTCCGTGTGTGACAATGTCTGGAGCCCTTTCCAGCAG-----------------------------------------------CCTGGCCTCACCCGGGGCGGC-GGCACCTCTGGGATGCTCAGAGGTGGGCAGGCAGGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 8685 126 - 21531802 AGTGAAAGGCTGGAACGCTCATCCTGTCCCACTCGGTGTGTGACAACGTCTGGAGCCCTTTCCAGCAG-----------------------------------------------CCTGGCCTCATCCAGGGCGGC-GGCACCTCTGGGATGCTCAGAGGTGGGCAGGCAGGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 25089 126 - 2515279 AGTGAAAGGCTGGAACGCTCATCCTGTCCCACTCTGTGTGTGACAATGTCTGGAGCCCTTTCCAGCAG-----------------------------------------------CCTGGCCTCACCCGGGGCGGC-GGCACCTCTGGGATGCTCAGAGGTGGGCAGGCAGGTG i manLeu1.NW_012101810v1 C 0 C 0 s cebCap1.NW_016107703v1 391329 174 - 2125214 AGTGAAAGGTTGGAACACGCATCCTGACCCACTCAGCGCAAGACAGTGTCTGGAACCCTTTCCAGCAGGTCCATTCAACATCAGTCAGCACAGAAATCTGGGCACCAGTCTTGGCCCCGCCCTCATCCGTGGCTGTGGGCACGTCTGGGATGCTCAGAGGTGGGCAAGCAGGTG i cebCap1.NW_016107703v1 C 0 I 3 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I a score=2068337.000000 s hg38.chr7_KI270899v1_alt 39070 504 + 190869 TCATCTCACAGGTGCAGATGTCAAGGCTCTGAGGACACTGTGACCACCCAGCCCACACACGATGGCGGAGGGAAGATCCTGGCCATTTGTGGCCCACCCAGTTTTCCACCGCTCTCTATTTTCCCTACATCCCCACTTCCTCTGCTCCTCTGCAGAGCATGGAGCCCCTTCCACATGTACAAGAGGTGCTGAGTGGGACCGTGGCTGAGAGAAGGCTGCCAGGCTGTGCCCTGTGGTGCGGTGGGCCTGGAGTGTGGGGAGGACTGCAGCGTCTGCAGGTAGGGCACCTGCCATGAGCGGGTCCTCTCCCATCTGACCCTCCTGCCCCCACATCTAGTTCTTCTCTTGCTGCCAGGTTCTACTCATTGGTAAGGTCTGCCTCTTGCTGGAAGCCCTTCCTCCACTCCTGTCGTCCTCAGAAGGGTGACCCTAGA-----ACTCCTGAGGGTGGCATTCAAGAACTTCCCAGCACCACAGATGCTCAAACTGTTTCTTCTCAGGGTCAA--A- s gorGor5.CYUI01015914v1 2262 504 - 432965 TCATCTCACAGGTGCAGATGTCGAGGCTCTGAGGACACTGTGACCACCTAGCCCACACACGATGGCTGAGGGAAGATCCTGGCCATTTGTGGCCCACCCAGTTTTCCACCGCTCTCTATTTTCCCCACATCTCCCCTTCCTCTGCTCCTCTGCAGAGCATGGAGCCCCTTCCACATGTACAAGAGGTGCTGAGTGGGACTGTGACTGAGAGAAGGCTGCCAGGCTGTGCCCTGTGGTGCGGTGGGCCTGGAGTGCGGGGAGGACTGCAGCGTCTGTGGGTAGGGCACCTGCCGTGAGCAGGTCCTCTCCCATCTGACCCTCCTGCCCCCGCATCTAGTTCTTCTCTTGCTGCCAGGTTCTACTCACTGGTAAGGTCTGCCCCTTGCTGGAAGCCCTTCCTCCACTCCTGTCGTCCTCAGAAGGGTGACCCTAGA-----ACTCCTGAGGGTGGCATTCAAGAACTTCCCAGCACCACAGATGCTCAAACTGTTTCTTCTCAGGGtcaa--a- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 65696 464 + 85365473 TCATCTCACAGGTGCAGATGTCGAGGCTCTGAGGACACTGTGACCACCCAGCCCACACACGATGGCGGAGGAAAGATCCTGGCCTTTTGTGGCCCACCCAGTTTTCCACCTCCCTCTGTTTTCCCTGCATCCCC-CTTCCTCTGCTCCTCTGCAGAGCATGGAGCCCCTTCTACACGTACAAGAGGGGCTGAGTGGGACCGTGGCTGAGAGAAGGCTGCCAGGCTGTGCCCTGTGGTGCAGTGGGTCTGGAGCGCGGGGAGGACAGCAGCGTCTGCAGGTAGGGCACCTGCCGTGAGCGCGTC---------------------------------------CTCTTGCTGCCGGGTTATACTCATTGGTGAGGTCTGCCCCTTGCTGGAAGCCCTTCCGTGACTCCTGTCGTCCTCAGAAGGGTGACCCTAGA-----ACTCCTGAGGGTGGCATTCAAGAATTTCCCAGCACCACAGATGCTCAAACTGTTTCCTCTCAGGGtcaa--a- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33901822 503 + 185818997 TCATCTCACAGGTGCAGACGTCGAGGCTCTGGGGACA--GTGACCAGCCAGCCCACACACGACGGTGGAGGGAAGATCCCAGCCATTTGTGGCCCACCTAGTTTTCTACCTGCCTCTG-TTTCCCTGCATCCCCCCTTCCTCTGCTCCTCTGCAGGGCATGGAGCCCCTTCCACGTGCACAAGAGGTGCTGAGCAGGGCCGCGGCTGAGAGAAGGCTGCCAGGCTGCTCCCTGTAGTGCAGTGGGCCTGGACTGCGGGGAGGACTGCAGCGTCTGCAGGTAGGGCACTTGCCACCAGCGCATCCTCTCCCCTCTGACCCTCCT-CCCCCACATCTAGTTCTTCTCCTGCTGCCAGGGTCTACACGTTGGTAAGGTCTGCCCCTGGCTGGAAGCCCTTCCTCGACCCCTATCTTCGT-AGAAGCATGACCCTAGAGGGTCACTCCTGAGGGTGGCATTCAAGAACTTCCCAGCACCACAGATGCTCAACCTGTTTCCTCTCAGCGTCaa---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33517786 503 + 192294377 TCATCTCACAGGTGCAGACGTCGAGGCTCTGGGGACA--GTGACCAGCCAGCCCACACACGACGGTGGAGGGAAGATCCCAGCCATTTGTGGCCCACCTAGTTTTCTACCTGCCTCTG-TTTCCCTGCATCCCCCCTTCCTCTGCTCCTCTGCAGGGCATGGAGCCCCTTCCACGTGCACAAGAGGTGCTGAGCAGGGCCGCAGCTGAGAGAAGGCTGCCAGGCTGCTCCCTGTAGTGCAGTGGGCCTGGACTGCGGGGAGGACTGCAGCGTCTGCAGGTAGGGCACTTGCCACCAGCGCATCCTCTCCCCTCTGACCCTCCT-CCCCCACATCTAGTTCTTCTCCTGCTGCCAGGGTCTACACGTTGGTAAGGTCTGCCCCTGGCTGGAAGCCCTTCCTCGACCCCTATCTTCGT-AGAAGCATGACCCTAGAGGGTCACTCCTGAGGGTGGCATTCAAGAACTTCCCAGCACCACAGATGCTCAACCTGTTTCCTCTCAGCGTCaa---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4279503 504 - 9440265 TCATCTCACAGGTGCAGACGTCGAGGCTCTGGGGACA--GTGACCAGCCAGCCCACACACGACGGTGGAGGGAAGATCCCAGCCATTTGTGGCCCACCTAGTTTTCTACCTGCCTCTG-TTTCCCTGCATCCCCCCTTCCTCTGCTCCTCTGCAGGGCATGGAGCCCCTTCCACGTGCACAAGAGGTGCTGAGCAGGGCCGTGGCTGAGAGAAGGCTGCCAGGCTGCTCCCTGTAGTGCAGTGGGCCTGGACTGCGGGGAGGACTGCAGCGTCTGCAGGTAGGGCACTTGCCACCAGCGCATCCTCTCCCCTCTGACCCTCCT-CCCCCACATCTAGTTCTTCTCCTGCTGTCAGGGTCTACACGTTGGTAAGGTCTGCCCCTGGCTGGAAGCCCTTCCTCGACCCCTATCTTCCT-AGAAGCATGACCCTAGAGGGTCACTCCTGAGGGTGGCATTCAAGAACTTCCCAGCACCACAGATGCTCAACCTGTTTCTTCTCAGCGTCaaa--- i macNem1.NW_012019910v1 C 0 I 1089 s cerAty1.NW_012002954v1 16868398 504 - 21915920 TCATCTCACAGGTGCAGACGTCGAGGCTCTGGGGACA--GTGACCAGCCAGCCCACACACGATGGTGGAGGGAAGATCCCAGCCATTTGTGGCCCACCTAGTTTTCTACCTGCCTCTG-TTTCCCTGCATCCCCCCTTCCTCTGCTCCTCTGCAGGGCATGGAGCCCCTTCCACGTGCACAAGAGGTGCTGAGCAGGGCCGCGGCTGAGAGAAGGCTGCCAGGCTGCTCCCTGTAGTGCAGTGGGCCTGGACTTTGGGGAGGACTGCAGCGTCTGCAGGTAGGGCACTTGCCACCAGCGCATCCTCTCCCGTCTGACCCTCCT-CCCCTACATCTAGTTCTTCTCCTGCTGCCAGGGTCTACACGTTGGTAAGGTCTGCCCCTGGCTGGAAGCCCTTCCTCGACCCCTATCTTCCT-AGAAGCATGACCCTAGAGGGTCACTCCTGAGGGTGGCATTCAAGAACTTCCCAGCACCACAGATGCTCAACCTGTTTCCTCTCAGTGTCaa-a-- i cerAty1.NW_012002954v1 C 0 I 13 s chlSab2.chr28 8811 503 - 21531802 TCATCTCACAGGTACAGATGTCGAGGCTCTGGGGACA--GTGACCAGCCAGCCCACACACGACGGTGGAGGGAAGATCCCAGCCATTTGTGGCCCACCTAGTTTGCTACCTGCCTCAG-TTTCCCTGTATCCCCCCTTCCTCTGCTCCTCTGCAGGGCACAGAGCCCCTTCCACATGCACAAGAGGTGTTGAGCAGGGCCGCGCCTGAGAGAAGGCTGCCAGGCTGCTCCCTGTGGTGCAGTGGGCCTGGACTGCAGGGAGGACTGCAGCGTCTGCAGGTAGGGCACTTGCCACGAGCGCATCCTCTCCCGTCTGACCCTCCT-CCCCCACATCTAATTCTTCTCCTGCTGCCAGGGTCTACACGTTGGTAAGGTCTGCCCCTGGCTGGAAGCCCTTCCTCGAACCCTATCGTCCT-AGAAGCATGACCCTAGAGGGTCACTCCTGAGGCTGGCATTCAAGAACTTACCAGCACCACAGATGCTCAACCTGTTTCCTCTCAGGGTCaa---- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 25215 503 - 2515279 TCATCTCACAGGTGCAGACGTCGAGGCTCCGGGGACA--GTGACCAGCCAGCCCACACACGATGGTGGAGGGAAGATCCCAGCCATTTGTGGCCCACCTAGTTTTCTACCTGCCTCTG-TTTCCCTGCATCCCCCCTTCCTCTGCTCCTCTGCAGGGCATGGAGCCCCTTCCACGTGCACAAGAGGTGCTGAGCAGGGCCGCGGCTGAGAGAAGGCTGCCAGGCTGCTCCCTGTAGTGCAGTGGGCCTGGACTTCGGGGAGGACTGCAGCGTCTGCAGGTAGGGCACTTGCCACCAGCGCATCCTCTCCCGTCTGACCCTCCT-CCCCCACATCTAGTTCTTCTCCTGCTGCCAGGGTCTACACGTTGGTAAGGTCTGCCCCTGGCTGGAAGCCCTTCCTCGACCCCTATCTTCCT-AGAAGCATGACCCTAGAGGGTCACTCCTGAGGGTGGCATTCAAGAACTTCCCAGCACCACAGATGCTCAACCTGTTTCCTCTCAGCGTCaa---- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146542653 501 - 204313951 TCATCTCACAGGTGCAGATGTCGTGGTTCTAAGGATGCCGTCACCACCCAGCCCACAC-TGATGGTGGAGGGAAGATCCCAGCCATTTGTAGCCCACTCAGTTTTCCACCTCCCTCTACTCTCCCTGCATCCCCTCTTCCTCTGCTCCCCTGCAGAGCATGGAGACCCTTCTATGTGCACAAGAAGTGCTGAG--GGGGCCTGGCTGAGAGATGGCTGCCAGGCTGTTCCCTGTGGTGCAGTGGGCCTTGGGTGGGGAGAGGACTGCAGCATCTGCAGGTACGACACCTGTCATGAGCACATCCTCTCCCATCTGTCCCTCCTGCCCCCACATCTAGTTCTTCTCCTGCAACCAGGTTCTACCTGTTGGCAATGTCTGCCCCTTGCTGGAAGCCCTTTCTTGACTCCTGGCATCCTTAGTAGTGTGACCCTAGA-----ACTCCTGAGGGTGGCACTCAAGAATTTCCCAGTGCCACAGATGTTCGAATGGTTTCCTCTCAGGGtcaa---a i calJac3.chr2 N 0 C 0 s cebCap1.NW_016107703v1 391506 501 - 2125214 TCATTTCACAGGTGCAGATGTCAAGGCTCTAAGAACACTGTGACCACCCAGCCCACAC-CGATGGTGGAGGGAAGATCCCCGCCATTTGTAGCCCACTCAGTTTTCCACCTCCCTCTACTCTCCCTGAATCCCCTCTTCCTCTGCTCCTCTGCAGAGCATGGAGCCCCTTCCATGTACACAAGAGGTGCTGAG--GGGGCCTGGCTGAGAGAAGGCTGCCAGGCTGTCCCTTGTGGTGCAGTGGGCCTGGGGTTGGGGGAGGACTGCAGCATCTGCAGGTACAACACCTGTCATGAGCGCATCCTTTCCCATCTGCCCCTTCTGCCCCCCCATCTAGTTCTTCTCCTGCCACCAGGTTCTAGCTGCTGGCAATGTCTGCCCCTTGCTGGAAGCCCTTCCTTGCCTCCTGGCATCCTCAGAAGCGTGACCCTGGA-----ACTCCTGAGGGTGGCACTCAAGAATTTCCCAGCACCACAGATGTTCGAATGGTCTCCTCTCAGGGTGaa---a i cebCap1.NW_016107703v1 I 3 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I a score=30458.000000 s hg38.chr7_KI270899v1_alt 39574 11 + 190869 ACCACAATGCT s gorGor5.CYUI01015914v1 2766 11 - 432965 accacaatgct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 66160 11 + 85365473 accacaatgct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33902325 11 + 185818997 accacgatgct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33518289 11 + 192294377 accacgatgct i macFas5.chr3 C 0 C 0 s chlSab2.chr28 9314 11 - 21531802 accacaatgct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 25718 11 - 2515279 accacgatgct i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146543154 11 - 204313951 accatgatgat i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 392007 11 - 2125214 accatgatgat i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cerAty1.NW_012002954v1 16868902 13 - 21915920 I e macNem1.NW_012019910v1 4280007 1089 - 9440265 I a score=7764.000000 s hg38.chr7_KI270899v1_alt 39585 7 + 190869 GAAAtat s rheMac8.chr3 33902336 7 + 185818997 gatatat i rheMac8.chr3 C 0 C 0 s chlSab2.chr28 9325 7 - 21531802 gatatat i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 25729 7 - 2515279 gatatat i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146543165 7 - 204313951 gaaatat i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 392018 7 - 2125214 gaaatat i cebCap1.NW_016107703v1 C 0 I 2950 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cerAty1.NW_012002954v1 16868902 13 - 21915920 I e macNem1.NW_012019910v1 4280007 1089 - 9440265 I e macFas5.chr3 33518300 0 + 192294377 C e nomLeu3.chr20 66171 0 + 85365473 C e gorGor5.CYUI01015914v1 2777 0 - 432965 C a score=1910.000000 s hg38.chr7_KI270899v1_alt 39592 2 + 190869 ca s rheMac8.chr3 33902343 2 + 185818997 ca i rheMac8.chr3 C 0 C 0 s chlSab2.chr28 9332 2 - 21531802 ca i chlSab2.chr28 C 0 I 3 s manLeu1.NW_012101810v1 25736 2 - 2515279 ca i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146543172 2 - 204313951 ca i calJac3.chr2 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cerAty1.NW_012002954v1 16868902 13 - 21915920 I e macNem1.NW_012019910v1 4280007 1089 - 9440265 I e macFas5.chr3 33518300 0 + 192294377 C e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e nomLeu3.chr20 66171 0 + 85365473 C e gorGor5.CYUI01015914v1 2777 0 - 432965 C a score=1213.000000 s hg38.chr7_KI270899v1_alt 39594 3 + 190869 tct s rheMac8.chr3 33902345 3 + 185818997 cct i rheMac8.chr3 C 0 C 0 s manLeu1.NW_012101810v1 25738 3 - 2515279 cct i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146543174 3 - 204313951 tct i calJac3.chr2 C 0 I 2988 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e chlSab2.chr28 9334 3 - 21531802 I e cerAty1.NW_012002954v1 16868902 13 - 21915920 I e macNem1.NW_012019910v1 4280007 1089 - 9440265 I e macFas5.chr3 33518300 0 + 192294377 C e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e nomLeu3.chr20 66171 0 + 85365473 C e gorGor5.CYUI01015914v1 2777 0 - 432965 C a score=0.000000 s hg38.chr7_KI270899v1_alt 39597 2589 + 190869 cttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattatatgaggccagcatcattctgataccaaagccgggcagagacacaaccaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaacgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattgatgggacgtatttcaaaataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaaccccattgtctcagctcaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcctatacaccaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcatgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttcttcacacaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcctgcatcgccacgtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataacgctgcatatctacaactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctgtttaacaaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaagatggattaaagacttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccgttcaggacataggcatgggcaaggacttcatgtctaaaaccccaaaagcaatggcaacaaaagccaaaattgaccaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaacatgggagaaaatttttgcaacctactcatctgtcaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccgcatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatgctcaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgctataaagacacatgcacacgtatgtttactgcagcactattcacaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatgaaattggaaatcatcattctcagtaaactatcgcaagaacaaaaaaccaaacacctcatgttctcactcataggtgggaattgaacaatgaaaacacatagaaacaggaaggggaacatcacaccctggggactgttgtggggtggggggaggggggaaggatagcactgggagacatacctaatgctaaatgacgagttaatgggtgcagcacaccagcatggcacatgtatacgtatgtaacaaacctgcacaatgtgcacatgtaccctaaaacttaaagtataataattaaaaaaaaaattaaaaaaaaaaaaa e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e chlSab2.chr28 9334 3 - 21531802 I e manLeu1.NW_012101810v1 25741 0 - 2515279 C e cerAty1.NW_012002954v1 16868902 13 - 21915920 I e macNem1.NW_012019910v1 4280007 1089 - 9440265 I e macFas5.chr3 33518300 0 + 192294377 C e rheMac8.chr3 33902348 0 + 185818997 C e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I e nomLeu3.chr20 66171 0 + 85365473 C e gorGor5.CYUI01015914v1 2777 0 - 432965 C a score=1050.000000 s hg38.chr7_KI270899v1_alt 42186 3 + 190869 gaa s gorGor5.CYUI01015914v1 2777 3 - 432965 gaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 66171 3 + 85365473 gaa i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33518300 3 + 192294377 gat i macFas5.chr3 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e chlSab2.chr28 9334 3 - 21531802 I e manLeu1.NW_012101810v1 25741 0 - 2515279 C e cerAty1.NW_012002954v1 16868902 13 - 21915920 I e macNem1.NW_012019910v1 4280007 1089 - 9440265 I e rheMac8.chr3 33902348 0 + 185818997 C e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=7159.000000 s hg38.chr7_KI270899v1_alt 42189 9 + 190869 atatcatct s gorGor5.CYUI01015914v1 2780 9 - 432965 atatcatct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 66174 9 + 85365473 gtatcatct i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33518303 9 + 192294377 atatcacct i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16868915 9 - 21915920 atatcacct i cerAty1.NW_012002954v1 I 13 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e chlSab2.chr28 9334 3 - 21531802 I e manLeu1.NW_012101810v1 25741 0 - 2515279 C e macNem1.NW_012019910v1 4280007 1089 - 9440265 I e rheMac8.chr3 33902348 0 + 185818997 C e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=3364861.000000 s hg38.chr7_KI270899v1_alt 42198 1435 + 190869 caccccagttgtgatggcgttcatcaaaaagacaaaaaataaccaagggaactcttgacactgttggtgggaatgtaaaccagtacagctactgtggaaagcagtgtggaggttcctcacagaactacaaacagaactgaggtaggaggtgggactcaactccagaggtggggctcgaacaccggaccagattgaggactagctaaaacagggctggggcggaagcagctttcaatcagacacacccaccagtgccatggaagtttatcgttgccatgacgacaccgggagttaccgctcctttccatggcaatgactcaatgacccaaaagttactatgccttccttagaaatttctgcataaaccgtctttaatccgcgtgaaattaaaagtgga-ttaaacatgactgcaaaactgccccgagctgctcttctcttcttacagggcagagagggtagccctgctctgcaggaaccgtctcagagctgtaacatttcttctttattaataaagctgtttttggccgggcacagtggctcacgcctgtcatcccagcactttgggaggctgaggtgggcggatcacgaggtgggaaattcaaaaccagcctggccaaaatgttgaaaccccgtctctactaaaaatacaaaaattaggtgggcgtcgtggtgcgtgcctgtaatcccagctacttgggaggctgaggcaggagaatctcttcaacccaggaggcggaggttataatgagccgagatcgctccactgcactccagcctgggtg---acagagcaagattccgtctctaaataaata----------------aagctgttttcttcttcctttggcttgcccttgaattctttcctgggcaaaggcaagaacccttgcagactaaactccaccttggggctcacctgccccacatcagaactaccataagatccagcaatccc-actcctggacatttatccaaaggaaaggaatcggtatatcaaaccaatatctgcaaccccatgtttattgacaatagtcaagacgtggaatcaacctaggtgtccaacagcagatgactggataaaaaacgtggtatatacacacagtggaatactagtcatctgta---aaaaaaaatgaagtcctgtcattcatggcaaaacggatggaactggaggacattatggtaagtgaaataagccaggaacagaaagttaaatactgaatgttctcactgacatgtggaaactttaaaaaatgttgctctcatagaagtaaaaagtagaacagaggatattagaggctgggaaggggagggagaggggacggatagggagagattttttaaaggatatggaattacagctggatgggaaaaataagtcctatggttctttggcactgtagggtgactatagttaactataattcatagtttcagatagctaggagga s gorGor5.CYUI01015914v1 2789 1435 - 432965 caccccagttgtgatggcgttcatcaaaaagacaaaaaataaccaagggaactcttgacactgttggtgggaatgtaaaccagtacagctactgtggaaagcagtgtggaggttcctcacagaactacaaacagaactgaggtaggaggtgggactcaactccagaggtggggctcgaacaccggaccagattgaggactagctaaaacagggctggggcagaagcagctttcaatcagacacacccaccagtgccatggaagtttatcgttgccatggcgacaccgggagttaccgctcctttccatggcaatgactcaatgacccaaaagttactatgccttccttagaaatttctgcataaaccgtctttaatctgtgtgaaattaaaagtgga-ttaaacatgactgcaaaactgccccgagctgctcttctcttcttagagagcagagagggtagccctgctctgcaggaacagtctcagagctgtaacattgcttctttattaataaagctgtttttggctgggcacagtggttcacgcctgtaatcccagcactttgggaggctgaggtgggcggatcacgaggttggaaattcaaaaccagcctggccaaaatgttgaaaccccgtctctactaaaaatacaaaaattaggtgggcgtggtggtgcgtgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttcaacccaggagacagaggttgcagtgagccgagatcgctccactgcactccagcctgggtg---acagagcaagactccgtctctaaataaata----------------aagctgttttcttcttcctttggcttgcccttgaattctttcctgggtaaaggcaagaacccttgcagactaaactccaccttggggctcacctgccccacatcagaactaccataagatccagcaatccc-actcctggacatgtatccaaaggaaaggaatcggtatatcaaaccaatatctgcaaccccatgtttattgacaatagtcaagacatggaatcaacctaggtgtccaacagcagatgactggataaaaaacatggtatatacacacagtggaatactagtcatctgta---aaaaaaaatgaagtcctctcattcatggcaaaacggatggaagtggaggacattatggtaagtgaaataagccaggaacagaaagctaaatactgaatgttctcactcacatgtggaaactttaaaaaatgttgctctcatagaagtaaaaagtagaatagaggatattagaggctgggaaggggagggagaggggacggatagggagagattttttaaaggatatggaattacagctggatgggaaaaataagtcctatggttctttggcactgtagggtgactatagttgactataattcatagtttcaaatagctaggagga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 66183 1434 + 85365473 caccccagttgtgatgactttcatcaaaaagacaaaaagtaaccaagggaactcttgacactgttggtgggaatgtaaaccagtacagctactgtggaaagcagcgtggaggttcctcacaaaactacaaacagaactgaagtaggaggtgggactcgactccagaggtggggctcgaacaccggaccaaattaaggacgagctaaaacagggctggggcggaagcagctttcaatcagacacgcccaccagtgccatggaagtttatcattgccatggcaacaccgggaggtaccgcccctttccatggcaatgactccatgacccaaaagttgctatgccttccttagaaatttctgcataaagaatccttaatccgtgtgaagttaaaagtgga-ttaaacctgactgcaaaactgccccgagctgctcttctcttcttacagggcacagagggtagccctgctctgcaggaacagtctcagagctgtaacattgcctct---ttaataaagctggttttggccgggcgcagtggctcacgcctgtaatcccagcactttgggatgctgaggtgggcggatcacgaggtcggaaattcaaaaccagcctggccaacatgttgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtgcgtgcctgtaatcccagctactttggaggctgaggcaggagaactgcttcaacccaagaggcagaggctgcagtgagccgagatcgctccactgcactccagcctgggtgacaacagagcaggactccatctccaaataaata----------------aagctgttttcttcttcctttggcttgcccttgaattctttcctgggcaaaggcaagaacccttgcggactaaactccaccttggggctcacctgccccacatcagaactaccataagatccagcaatcccaactcctggacatttatccaaaggaaaggaatcggtatatcaaaccaatatctgcaaccccatgtttattcacaatagtcaagacatggaatcaacccaggtgtccaacagcagatgactggataaaaaacgtggtatatacacacagtggaatactagtcatctgt----aaaaaaaacgaagtcctgtcattcatggcaacatggatggaactggaggacattatggtaagtgaaataagccaggaacagaaagttaaatactgaatgttctcactcacatgtggaaactttaaaaaatgttgatctcatgaaagtaaaaagcagagcagaggatgttagaggct-ggaagcggagggagaggggacggatacggagagattttttaaaggaaatggaattacagctgggtgggaaaaatcagtcctatggttctttggcactgtagggtgaccatagttaactataattcatagtctcaaatagctaggagga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33902348 1439 + 185818997 caccccagttatgatggc-ttcatcagaaagatataaaataaccaaaggcactctttacactgttcatgggaatgtaaaccagtacagctactgtggaaagcagtgtggaggttcctcaaaaaactacaaacagaactgaggtaggaggtgggact-gactccagaggtggggctcgagcaccggaccagactggggactagctaaaacagggctggggcagaagcagctttcattcagacatacac-ccagtgccgtgtgagtttaccattgccgtggcaacactgggagttcccactcctttccagggcaatgactcagtgaccccaaagttatcatcccttccttagagatttctgcataaactgtccttaatctgcaggaaattaaatgtgggtttaaatatgactacaaaactgccctgagctgctctcctcttcctacagggcagagagggtagctctgctctgcggaggcagtctcagaactgtaacactgccttt---tcaataaagctgttttcggccgggcacagtgcctcacgcctgcaatcccagcactttgggaggctgaagtgggtggatcacaaagtcaggagttcgaaaccatcctggccaacatgctgaaaccctgtctccactaaaaatacaaaaatcagctgggcgtggtggtgtgtgcctgtaatcccagctacttgggaggctggggcaggagaattgcttcaatccagaaggcagagattgcagtgagccaagatcgctccactgcactccagcctgggtg---acagagcaagactccgtctctaaataaata----aataaata----aagctgttttcttcctcctttggcttgcccttgaattctttcctgggcaaaggcaagaacctttgcggactaagctccactttggggctcacctgccccacctcagaactaccataagatccagcaatccc-attcctaggcatttatccaaaggaaaggaatcggtatatcaaaccggtatctgcagccccatgtctattcacaatagtcaagatatggaatcaacgtaggtgtccaacagcagatggctggataaagaatgtggtgtatacacacagtggagtaccagtcatctgtt-aaaaaaaaaatgaagtcctgtcattcatggcaaaacggatggaactggaggacattatgataggtgaaataagccaggaacagaaagttaaataccgaatgttctcactgatatgtggaaactttaaaaaatgttgatctcatagaagtaaaaagtagaacagagaatattagaggctgggaaggggagggagaggggacggatagggaaagatttgttaagggacatggaattacagctggatggg-aaaataagttctgtggttctttggcactgtagggtgactgtagctaacgataatttatagtttcaaatagctaggagga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33518312 1439 + 192294377 caccccagttatgatggc-ttcatcagaaagatataaaataaccaaaggcactctttacactgttcatgggaatgtaaaccagtacagctactgtggaaagcagtgtggaggttcctcaaaaaactacaaacagaactgaggtaggaggtgggact-gactccagaggtggggctcgagcaccggaccagactggggactagctaaaacagggctggggcagaagcagctttcattcagacataccc-ccagtgccgtgtgagtttaccattgccgtggcaacactgggagttcccactcctttccagggcaatgactcagtgaccccaaagttaccatcccttccttagagatttctgcataaactgtccttaatctgcaggaaattaaatgtgggtttaaatatgactacaaaactgccctgagctgctctcctcttcctacagggcagagagggtagctctgctctgcggaggcagtctcagaactgtaacactgccttt---tcaataaagctgttttcggccgggcacagtgcctcatgcctgcaatcccagcactttgggaggctgaagtgggtggatcacaaagtcaggagttcgaaaccatcctggccaacatgctgaaaccctgtctccactaaaaatacaaaaatcagctgggcgtggtggtgtgtgcctgtaatcccagctacttgggaggctgggtcaggagaattgcttcaatccagaaggcagagattgcagtgagccaagatcgctccactgcactccagcctgggtg---acagagcaagactctgtctctaaataaata----aataaata----aagctgttttcttcctcctttggcttgcccttgaattctttcctgggcaaaggcaagaacctttgcggactaagctccactttggggctcacctgccccacctcagaactaccataagatccagcaatccc-actcctaggcatttatccaaaggaaaggaatcggtatatcaaaccggtatctgcagccccatgtctattcacaatagtcaagatatggaatcaacgtaggtgtccaacagcagatggctggataaagaatgtggtgtatacacacagtggagtaccagtcatctgtt-aaaaaaaaaatgaagtcctgtcattcatggcaaaacggatggaactggaggacattatgataggtgaaataagccaggaacagaaagttaaataccgaatgttctcactgatatgtggaaactttaaaaaatgttgatctcatagaagtaaaaagtagaacagagaatattagaggctgggaaggggagggagaggggacggatagggaaagatttgttaagggacatggaattacagctggatggg-aaaataagttctgtggttctttggcactgtagggtgactgtagctaacgataatttatagtttcaaatagctaggagga i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16868924 1444 - 21915920 caccccagttatgatggc-ttcatcagaaagatataaaataaccaaaggcactctttacactgttcgtgggaatgtaaaccagtacagctactgtggaaagcagtgtggaggttcctcaaaaaactacaaacaaaactgaggtaggaggtgggact-gactccagaggtggggctcgagcaccggaccagactggggactagctaaaacagggctggggcagaagcagctttcattcagacataccc-ccagtgccgtgtgagtttaccattgccgtggcaacaccgggagttcccactcctttccagggcaatgactcagtgaccccaaagttaccatcccttccttagagatttctgcataaactgtccttaatctacaggaaattaaatgtgggtttaaatatgactacaaaactgccctaagctgctcttctcttcctacagggcagagagggtagctctgctctgcggaggcagtctcagaactgtaacactgccttt---tcaataaagctgttttcgaccgggcacagtgcctcacgcctgcaatcccagcactttgggaggctgaagtgggtggatcacgaagtcaggagttcgaaaccatcctggccaacatgctgaaaccccgtctccactaaaaatacaaaattcagctgggcgtggtggtgtgtgcctgtaatcccagctacttgggaggctggggcaggagaattgcttcaatcctgaaggcagagattgcagtgagccgagatcgctccactgcactccagcctgggtg---acagagcaagactccgtctctaaataaataaattaattaatt----aagctgttttcttcctcctttggcttgcccttgaattctttcctgggcaaaggcaagaacctttgcagactaagctccactttggggctcacctgccccacctcagaactaccataagatccagcaatccc-actcctgggcatttatccaaaggaaaggaatcggtatatcaaaccggtatctgcagccccatgtctattcacaatagtcaagatatggaatcaacgtaggtgtccaacagcagatggctggataaagaatgtggtgtatacacacagtggagtaccagtcatctgttaaaaaaaaaaatgaagtcctgtcattcatggcaaaacggatggaactagaggacattatgataagtgaaataagccaggaacagaaagttaaatactgaatgttctcactgatatgtggaaactttaaaaaatgttgatctcatagaagtaaaaagtagaacagagaatattagaggctgggaaggggagggagaggggacggatagggaaagatttgttaagggacatggaattacagctggatggg-aaaataagttctgtggttctttggcactgtagggtgactgtagctaatgataatttatagtttcaaatagctaggagga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 9337 1439 - 21531802 caccccagttataatggc-ttcatcagaaagatataaaataaccaagggcactctttacactgttggtgggaatgtaaaccagtacagctactgtggaaagcagtgtggaggttcctcaaaaaactacaaacagaactgagataggaggtgggact-gactccagaggtggggctcgaacaccagaccacactggggactagctaaaacagggctggagcagaagcaactttcattcagacacaccc-ccagtgccgtgtgagtttaccattgccgtggcaacaccaggagttcccgctcctttccagggcaatgactcagtgaccccaaagttaccatcccttccttagagatttctgcataaactgcccttaatctgcaggaaattaaatgtgggtttaaatatgactacaaaactgccctgagctgctcccctcttcctacagggcagagagggtagctctgctccacggaggcagtctcagaactgtaacactgcctct---tcaataaagctgtttttggccaggtgcagtggctcacgcctgcaatcccagcactttgggaggctgaagtgggtggatcacgaagtcaggagttcgaaaccatcctggccaacatgctgaaaccccgtctccactaaaaatacaaaaatcagctgggcgtggtggtgtgtgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttcaatccagaaggcagagattgcagtgagccgagatcgctccactgcactccagcctgggtg---gcagagcaagactccgtctctgaataaata----aataaata----aagctgttttcttcctcctttggcttgcccttgaattctttcctgggcaaaggcaagaacctttgcggactaagctccactttggggctcacctgccccacctcagaactaccataagatccagcaatccc-attcctgggcacttatccaaaggaaaggaatcggtatatcaaaccagtatctgcagccccatgtctatgcacaatagtcaagatatggaatcaacgtaggtgtccaacagcagatggctggataaagaatgtggtgtatacacacagtggagtaccagtcatctgtt-aaaaaaaaaatgaagtcctgtcattcatggcaaaacggatggaactggaggacattatgataagtgaaataagccaggaacagaaagttaaataccgaatgttctcactcatatgtggaaactttaaaaaatgttgatctcatagaagtaaaaagtagaacagagactattagaggctgggaaggggagggagaggggacggatagggaaagatttgttaagggacatggaattacagctggatggg-aaaataagttctgtggttctttggcactgtagggtgactgtagctaacgataatttatagtttcaaatagctaggagga i chlSab2.chr28 I 3 C 0 s manLeu1.NW_012101810v1 25741 1443 - 2515279 caccccagttatgatggc-ttcatcagaaagatataaaataaccaaaggcactctttacactcttcgtgggaatgtaaaccagtacagctactgtggaaagcagtgtggaggttcctcaaaaaactacaaacagaactgaggtaggaggtgggact-gactccagaggtggggctcgagcaccggaccagactggggactagctaaaacagggctggggcagaagcagctttcattcagacataccc-ccagtgccgtgtgagtctactattgccgtggcaacaccgggagttcccactcctttccagggcaatgactcagtgaccccaaagttaccatcccttccttagagatttctgcataaactgtccttaatctgcaggaaattaaatgtgggtttaaatatgactacaaaactgccctgagctgctctcctcttcctacagggcagagagggtagctctgctctgcggaggcagtctcagaactgtaacactgccttt---tcaatagagctgttttccgccgggcacagtgcctcacgcctgcaatcccagcactttgggaggctgaagtgggtggatcacgaagtcaggagttcgaaaccatcctggccaacatgctgaaaccccgtctccactaaaaatacaaaaatcagctgggcgtggtggtgtgtgcctgtaatcccagctacttgggaggctggggcaggagaattgcttcaatccagaaggcagagattgcagtgagccgagatcgctccactgcactccagcctgggtg---acagagcaagactccgtctctaaataaata----aataaataaattaagctgttttcttcctcctttggcttgcccttgaattctttcctgggcaaaggcaagaacctttgcggactaagctccactttggggctcacctgccccacctcagaactaccataagatccagcaatccc-actcctgggcatttatccaaaggaaaggaatcggtatgtcaaaccggtatctgcagccccatgtctattcacaatagttaagatatggaatcaacgtaggtgtctaacagcagatggctggataaagaatgtggtgtatacacacagtggagtaccagtcatctgtt-aaaaaaaaaatgaagtcctgtcattcatggcaaaacggatggaactggaggacattatgataagtgaaataagccaggaacagaaagttaaataccgaatgttctcactgatatgtggaaactttaaaaaatgttgatctcatagaagtaaaaagtagaacagagaatattagaggctgggaaggggagggagaggggacggatagggaaagatttgttaagggacatggaattacagctggatggg-aaaataagttctgtggttctttggcactgtagggtgactgtagctaacgataatttatagtttcaaatagctaggagga i manLeu1.NW_012101810v1 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e macNem1.NW_012019910v1 4280007 1089 - 9440265 I e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=1525257.000000 s hg38.chr7_KI270899v1_alt 43633 532 + 190869 gaaattatcgtgtttgagacgatggatgtgttcgccaccctgatctaatccttgattcattctatgtactgcagcatccctgtgaaccccacgaatatgtgccatattgtgtcaattaaaaaaaTAATAAGAAGTAATTGAGAACCCTAATAAGTATGGTTTATCTATTAACATTTACCATGTTAAAGATGAAAATGGAGAACAATTTAAAATCTTAAGAgtattagtctctagagggacaggactaataggatagaagtgtatatgaaagggagtttattaagtagtattgactcacacgatcacagggtgaagtcccacagta-ggctgcaagccgaggaacaaggaagccagtctgagtcccaaaacctcaaaagtagggaagccgacagtgcagccttcagtctggggccaaaggcccgagagcccctggcaaaccactggtgtaaatccaagagtccaaaa-ctgaagaacttggagtccggtattcaagggcaggaggcatccagcgtgggagaaagatgaaggccgg s gorGor5.CYUI01015914v1 4224 532 - 432965 gaaattatcgtgtttgagacga-ggatgtgttcgccaccctgatctaatccttgattcattctatgtactgcagcatccctgtgaaccccacgaatatgtgccatattgtgtcaatttaaaaaataaTAAAAAGTAATTGAGAACCCTAATAAGTATTGTTTATCTATTAACATTTACCATGTTACAGATGAAAATGGAGAACAATTTAAAATCTTAAGtgtattagtctctacagggacaggactaataggatagatgtgtatatgaaagggagtttattaagtagtactgactcacacgatcacaaggtgaagtcccacagta-ggctgcaagctgaggaacaaggaagccagtctgagtcccaaaacctcaaaagtagggaagccgacagtgcagccttcagtctgtggccaaaggccccagagcccctggcaaaccactggtgtaaatccaagagtccaaaagctgaagaacttggagtccggtattcaagggcaggaggcatccagcatgggagaaagatgaaggctgg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 67617 517 + 85365473 gaaatgatcacgtttgagacgatggatg------------tgatctaatccttgattcattctatgtactgcagcatccccgtgaaccccacgaatatgtgccatattgtgtcaactaaaaaaataaCAaaaagtaattgagaaccctaatgaatattgtttatctattgacatttaccatgttaaagatgcaaatggagaacaatttaaaatcctaagagtattagtctctagagggacaggacta-----atagatgtatatatgaaagggagtttattaagtagtattgactcacacggtcaccaggtgaagtcccacagtagggctgcaagctgaggaacaaggaagccagtctgattcccaaaacctcaaaactagggaagccgacggtgcagccttcagtctgtggccaaaggcccgagagcccctggcaaaccgctggtgtaaatccaagagtccaaaagctgaaggacttggagtccgatattcaagggcaggaggcatccagcatgggagaaagatgcaggccgg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33903787 519 + 185818997 gaaatgatcgcgtttgagatgatgaatgtgtttgtcaccttgttctaatcctcgattcattctgtgtactgcagcacccctgtgaactccacgaatatgtgccattatgtgtcaatgaaaaa---------aaGTGATTGAGAACCCTGATGAGCA----TTATCTGCTGACATTTACCACGTTACAAATGAAAATGGAGAACAATTTAAAATCCTAAGTGTGTTAGtctctagagggacaggactaatgggacagatatatacgtggaagggagtttatgaaggagtgttgactcacaggatcacaacgtgaagtcccacagta-ggctgcaagctgaggaacaaggacgccagtctgagtcccaaaacctcagaagaagggaagccgacagtgcagccctcaggctgtggccgaaggcccaagagcccccagcaaaccactggtgtaaatccaagagtccaaaagctgaagaactcagagtctgatatccaggggaagga-gcatccagcatgggagaaagatgaaggccgg i rheMac8.chr3 C 0 I 4899 s macFas5.chr3 33519751 519 + 192294377 gaaatgatcgcgtttgagatgatgaatgtgtttgtcaccctgttctaatcctcgattcattctgtgtactgcagcacccctgtgaactccacgaatatgtgccattatgtgtcaatgaaaaa---------aaGTGATTGAGAACCCTGATGAGCA----TTATCTGCTGACATTTACCACGTTACAAATGAAAATGGAGAACAATTTAAAATCCTAAGTGTGTTAGtctctagaggcacaggactaatgggacagatatatacgtggaagggagtttatgaaggagtgttgactcacaggatcacaacgtgaagtcccacagta-ggctgcaagctgaggaacaaggacgccagtctgagtcccaaaacctcagaagcagggaagccgacagtgcagccctcaggctgtggccgaaggcccaagagtccccagcaaaccactggtgtaaatccaagagtccaaaagctgaagaactcagagtctgatatccaggggaagga-gcatccagcatgggagaaagatgaaggccgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4281096 519 - 9440265 gaaatgatcgcgtttgagatgatgaatgtgtttgtcaccctgttctaatcctcgattcattctgtgtattgcagcacccctgtgaactccacgaatatgtgccattatgtgtcaatgaaaaa---------aaGTGATTGAGAACCCTGATGAGCA----TTATCTGCTGACATTTACCACGTTACAAATGAAAATGGAGAACAATTTAAAATCCTAAGTGTGTTAGtctctagagggacaggactaatgggacagatatatacgtggaagggagtttatgaaggagtgttgactcacaggatcacaacgtgaagtcccacagta-ggctgcaagctgaggaacaaggacgccagtctgagtcccaaaacctcagaagcagggaagccgacagtgcagccctcaggctgtggccgaaggcccaagagcccccagcaaaccactggtgtaaatccaagagtccaaaagctgaagaactcagagtctgatatccaggggaagga-gcatccagcatgggagaaagatgaaggccgg i macNem1.NW_012019910v1 I 1089 C 0 s cerAty1.NW_012002954v1 16870368 519 - 21915920 gaaatgatcgcatttgagatgatgaatgtgtttgtcaccctgttctaatcctcgattcattctgtgtactgcagcacccctgtgaactccacgaatatgtgccattatgtgtcaatgaaaaa---------aaGTGATTGAGAACCCTGATGAGCA----TTATCTGCTGACATTTACCACGTTACAAATGAAAATGGAGAACAATTTAAAATCCTAAGTGTGTTAGtctctagagggacaggactaatggcacagatatatacgtggaagggagtttatgaaggagtgttgactcacaggatcacaacgtgaagtcccacagta-ggctgcaagctgaggaacaaggatgccagtctgagtcccaaaacctcagaagcagggaagccgacagtgcagccctcaggctgtggccgaaggcccaagagcccccagcaaaccactggtgtaaatccaagagtccaaaagctgaagaactcggagtctgatatccaggggaagga-gcatccagcatgggagaaagatgaaggccgg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 10776 523 - 21531802 gaaatgatcgcgtttgagatgatgaatgtgtttgccaccctgttctaatcctcgattcattctgtgtactgcagcacccctgtgaactccacgaatatgtgccattatgtgtcaatgaaaaa---------aaGTGATTGAGAACCCTGATGAGCATTGTTTATCTGCTGACATTTACCACGTTACAAATGAAAATGGAGAACAATTTAAAATCCTAAGTGTGTTAGtctctagcgggacaggactaataggacagatgtgtacatggaagggagtttatgaaggagtgttgactcacaggatcacaacgtgaagtcccatagta-ggctgcaagctgaggaacaaggatgccagtctgagtcccaaaacctcagaagcagggaagctgacagtgcagccctcaagctgtggccgaaggcccaagagcccccggcaaaccactggtgtaaatccaagagtccaaaagctgaagaactccgattctgatatccaggggaagga-gcatccagcatgggagaaagatgaaggccgg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 27184 519 - 2515279 gaaatgatcgcatttgagatgatgaatgtgtttgtcaccctgttctaatcctcgattcattctgtgtactgcagcacccctgtgaactccacgaatatgtgccattatgtgtcaatgaaaaa---------aaGTGATTGAGAACCCTGATGAGCA----TTATCTGCTGACATTTACCACGTTACAAATGAAAATGGAGAACAATTTAAAATCCTAAGTGTGTTAGtctctagagggacaggactaatgggacagatatatacgtggaagggagtttatgaaggagtgttgactcacaggatcacaacgtgaagtcccacagta-ggctgcaagctgaggaacaaggacgccagtctgagtcccaaaacctcagaagcagggaagccgacagtgcagccctcaggctgtggccgaaggcccaagagccgccagcaaaccactggtgtaaatccaagagtccaaaagctgaagaactcggagtctgatatccaggggaagga-gcatccagcatgggagaaagatgaaggccgg i manLeu1.NW_012101810v1 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=4242.000000 s hg38.chr7_KI270899v1_alt 44165 2 + 190869 aa s gorGor5.CYUI01015914v1 4756 2 - 432965 aa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 68134 2 + 85365473 ag i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33520270 2 + 192294377 aa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4281615 2 - 9440265 aa i macNem1.NW_012019910v1 C 0 I 4895 s cerAty1.NW_012002954v1 16870887 2 - 21915920 aa i cerAty1.NW_012002954v1 C 0 I 4962 s chlSab2.chr28 11299 2 - 21531802 aa i chlSab2.chr28 C 0 I 4901 s manLeu1.NW_012101810v1 27703 2 - 2515279 aa i manLeu1.NW_012101810v1 C 0 I 4902 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e rheMac8.chr3 33904306 4899 + 185818997 I e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=-1080.000000 s hg38.chr7_KI270899v1_alt 44167 1 + 190869 -g s gorGor5.CYUI01015914v1 4758 1 - 432965 -g i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 68136 1 + 85365473 -g i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33520272 1 + 192294377 c- i macFas5.chr3 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e chlSab2.chr28 11301 4901 - 21531802 I e manLeu1.NW_012101810v1 27705 4902 - 2515279 I e cerAty1.NW_012002954v1 16870889 4962 - 21915920 I e macNem1.NW_012019910v1 4281617 4895 - 9440265 I e rheMac8.chr3 33904306 4899 + 185818997 I e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=17933.000000 s hg38.chr7_KI270899v1_alt 44168 7 + 190869 actcagc s gorGor5.CYUI01015914v1 4759 7 - 432965 actcagc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 68137 6 + 85365473 actcag- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33909205 7 + 185818997 Actcagt i rheMac8.chr3 I 4899 C 0 s macFas5.chr3 33520273 7 + 192294377 actcagc i macFas5.chr3 C 0 I 4895 s macNem1.NW_012019910v1 4286512 7 - 9440265 Actcagt i macNem1.NW_012019910v1 I 4895 C 0 s cerAty1.NW_012002954v1 16875851 7 - 21915920 Actcagt i cerAty1.NW_012002954v1 I 4962 C 0 s chlSab2.chr28 16202 7 - 21531802 Actcagt i chlSab2.chr28 I 4901 C 0 s manLeu1.NW_012101810v1 32607 7 - 2515279 Actcagt i manLeu1.NW_012101810v1 I 4902 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=216511.000000 s hg38.chr7_KI270899v1_alt 44175 74 + 190869 cagtctcgtccttccgcatttctctgcctgcttttatcccagccacactggcaactgatgagatgatgcccacc s gorGor5.CYUI01015914v1 4766 74 - 432965 cagtctagtccttccgcatttctctgcctgctcttatcccagccccactggcaactgatgagatggtgcccacc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 68143 65 + 85365473 ---------ccttccacatttctctgcctgcttttatcccggccatgctggcagctgattagaaggcgcccacc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33909212 74 + 185818997 cagtctagtccttccacatttctctgcctgcttttatcccagccacactggcagctgattagcaggtgcccacc i rheMac8.chr3 C 0 I 30 s macFas5.chr3 33525175 74 + 192294377 cagtctagtccttccacatttctctgcctgcttttatcccagccacactggcagctgattagcaggtgcccacc i macFas5.chr3 I 4895 C 0 s macNem1.NW_012019910v1 4286519 74 - 9440265 cagtctagtccttccacatttctctgcctgcttttatcccagccacactggcagctgattagcaggtgcccacc i macNem1.NW_012019910v1 C 0 I 30 s cerAty1.NW_012002954v1 16875858 74 - 21915920 cagtctagtccttccacatttctctgcctgcttttatcccagccacactggcagctgattagcaggtgcccacc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 16209 73 - 21531802 cagtctagtccttccacatttctctgcctgcttttatcccagccacactggcagctgattagcaggtgcccac- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 32614 73 - 2515279 cagtctagtccttccacatttctctgcctgcttttatcccagccacactggcagctgattagcaggtgcccac- i manLeu1.NW_012101810v1 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=32065.000000 s hg38.chr7_KI270899v1_alt 44249 35 + 190869 cagattgagggtgggtctgcctctcccaggtccac s gorGor5.CYUI01015914v1 4840 35 - 432965 cagattgagggtgggtctgcctctcccaggtccac i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 68208 35 + 85365473 cagatcgagggtgggtgggcctctcccaggtccac i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33525249 30 + 192294377 -aggtggaggg-ggtttggcctctcct-gattc-- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16875932 30 - 21915920 -aggtggaggg-ggtttggcctctccc-gatcc-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 16282 31 - 21531802 caggtggaggg-gagttggcctctccc-ggtcc-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 32687 31 - 2515279 caggtggaggg-ggtttggcctctccc-gatcc-- i manLeu1.NW_012101810v1 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e macNem1.NW_012019910v1 4286593 30 - 9440265 I e rheMac8.chr3 33909286 30 + 185818997 I e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=651662.000000 s hg38.chr7_KI270899v1_alt 44284 223 + 190869 tgactcaaatgtgaatctcccttggcaacactctcacggacgcacccaggaacaatactctgcatctttcaatccaatcaagttga----caatagtaaccatcacaTTAAG----TAACCAATTAGTGAAAAC----TCATAATGAATCCATTATGCTAATGAACATCAAGGATTATGTTatgttcataacataacatgttacgaaaataactatattttctttagaaactggt s gorGor5.CYUI01015914v1 4875 223 - 432965 tgactcaaatgtgaatctcccttggcaacactctcacggacacacccaggaacaatactctgcatccttcaatccaatcaagttga----caatattaatcatcacaTTAAG----TAACCAATTAGTGAAAAC----TCATAGTGAATCCATTATGCTAATGAACATCAAGGATTATGTTACGTTCATCACataacatgttatgaaaataactatattttctttagaaactggt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 68243 231 + 85365473 tgactcaaatgtgaatctcccttggcaacactctcacagacacacccaggaataatcctctgcatccttcaatccaatcaagctgacactcagtattaaccattacgttaagtaattaactaattagagaaaac----taataatgaatccattatgctaattaacataatggattacgttatgttcataacataacatgttatgaaaataactatattttctttagaaactggt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33909316 231 + 185818997 tgactctaatgtgaatctcccttggcaacaccctcacagacacacccaggaacaatgctctgcatccttccatcctatcaagttgacactcagtattaaccattacattaag----taattaactagtgaaaacaaattaataatgaatccattaagctaactaacataatggattgtgtcatgttcataacacagcacgttctgaagataaccatcttttcttgggaagctggt i rheMac8.chr3 I 30 C 0 s macFas5.chr3 33525279 231 + 192294377 tgactctaatgtgaatctcccttggcaacaccctcacagacacacccaggaacaatgctctgcatccttccatcctatcaagttgacactcagtattaaccattacattaag----taattaactagtgaaaacaaattaataatgaatccattaagctaactaacataatggattgtgtcatgttcataacacagcacgttctgaagataaccatcttttcttgggaagctggt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4286623 231 - 9440265 tgactctaatgtgaatctcccttggcaacaccctcacagacacacccaggaacaatgctctgcatccttccatcctatcaagttgacactcagtattaaccattacaTTAAG----TAATTAACTAGTGAAAACAAATTAATAATGAATCCATTAAGCTAACTAACATAATGGATTGTGTCATGTTCATAACACAGCACGTTCTGAAGATAACCATCTTTTCTTGGGAAGCTGGT i macNem1.NW_012019910v1 I 30 C 0 s cerAty1.NW_012002954v1 16875962 231 - 21915920 tgactctaatgtgaatctcccttggcaacaccctcacagacacacccaggaacaatgctctgcatccttccatcctatcaagttgacactcagtattaaccattacaTTAAG----TAATTAACTAGTGAAAACAAATTAATAATGAATCCATTAAGCTAACTAACCTAACGGATTGTGTCATGTTCATAACACAGCACGTTCTGAAGATAACCATCTTTTCTTGGGAAGCTGGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 16313 231 - 21531802 tgactctaatgtgaatctcccttggcaacaccctcacagacacacccaggaacaatgctctgcgtccttccatcctatcaagttgacactcagtattaaccattacaTTAAG----TAATTAACTAGTGAAAACGAATTAATAATGAATCCATTAAGCTAACTAACATAATGGATTGTGTCATGTTCATAACACAGCACGTTCTGAAGATAACCATCTTTTCTTGGGAAGCTGGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 32718 231 - 2515279 tgactctaatgtgaatctcccttggcaacaccctcacagacacacccaggaacaatgctctgcatccttccatcctatcaagttgacactcagtattaaccattacattaag----taattaactagtgaaaacaaattaataatgaatccattaagctaactaacataacggattgtgtcatgttcataacacagcacgttctgaagataaccatcttttcttgggaagctggt i manLeu1.NW_012101810v1 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cebCap1.NW_016107703v1 392025 2950 - 2125214 I e calJac3.chr2 146543177 2988 - 204313951 I a score=34989.000000 s hg38.chr7_KI270899v1_alt 44507 9 + 190869 gacaggagt s gorGor5.CYUI01015914v1 5098 9 - 432965 gacaggagt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 68474 9 + 85365473 gacaggagt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33909547 9 + 185818997 gacgggagt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33525510 9 + 192294377 gacgggagt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4286854 9 - 9440265 GACGGGAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16876193 9 - 21915920 GACGGGAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 16544 9 - 21531802 GACGGGAGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 32949 9 - 2515279 gacgggagt i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146546165 9 - 204313951 ggcaggagt i calJac3.chr2 I 2988 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cebCap1.NW_016107703v1 392025 2950 - 2125214 I a score=2161517.000000 s hg38.chr7_KI270899v1_alt 44516 542 + 190869 agcattgtttagatgtgtgaatgctcctgctgcctggctcctgggaaacaagtttcccatgtggaattctgtattcagtctgcagtgacatcacacgtcagttgcctctgcacacttgtgagag-aacgggagtggaaaaggcaCTCAACACTTCAGCCATGAGAGGAAACCTGTTTGAACTAAGAGTC----------CCCTAAGAGGGGAGCCAGCACCACTTAAAAACCTTTAAGTACTCTCAATAGAAATCTTTAGTTCACAAGATGTTTTAC-AAATACCTTATCCTAGTCTCCATATCATTTGTGGAAGGGAAAGTTTAGATTTTATTATTATTTTTTAAAAAATTATTATAGATATATTTAttattaaattttagtcaattttattaatcttttgatcatgtgatttttctatgta-ttttgcgaaatccacaaaatgtattcaaaatatattttcttatattttcatctaaagagtcttgctatatttataaagtttctcagtccacctgaaaataacctttgtgtatgtcttgaggtatagatcta s gorGor5.CYUI01015914v1 5107 541 - 432965 agcattgttcagatgtgtgaatgctcctgctgcctggctcctgggaaacaagtttcccatgtggaattctgtactcagtctgcagtgacatcacacgtcagttgcctctgcacacttgtgagag-aatgggagtggaaaaggcactcaacacttcggccatgcaaggaaacctgtttgaactcagagtc----------ccctaagagggGAGCCAGCATCACTTAAAAAtctttaagtactctcaatagaaatctttagttcacaagatgttttac-aaataccttatcctagtctccgtatcatttgtggaagggaaagtttagattttattatt-tttttaaaaaatttattatagatatatttattattaaattttagtcaattttattaatctttcgatcatgtgatttttctatgta-ttttgcgaagtccacgaaatgtattcaaaatatattttcttatgttttcatctaaagagtcttgctatatttataaagtttctcagtccacctgaaaataacctttgtgtatgtcttgaggtatagatcta i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 68483 551 + 85365473 agcattgtttagatgtgtgaacgctcctgctgcctggctcgtgggaaacaagtttcccatgtggaattctgtattcagtctgcagtgacatcacacgtcagctgcctctgcacacttgtgagag-aatgggagtggaaaaggcactcagcacttcagtcatacgaggaaacctgtttgacctAACCGTCAAGCAGATGATAGTAAGACAGGAGCCAGCGTCACTTACAAAtctttaagtactctcaatagaaatctttagttcacatgatgttttac-aaataccttatcctagtctccgtatcatttgtggaagggaaagtttagattttattatt-atttttaaaaatttattatagatatatttattattaaattttagtcaattttattaatcttttgatcatgtgatttttctatgta-ttttgtgaaatccatggaatgtattcaaaatatattttcttatattttcatataaagagtcttgctatatttataaagtttctcagtccacctgaaaataacctttgtgtatgtcttgaagaagagatcta i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33909556 539 + 185818997 agcattgttgaagtgtgtggatgctcctgctgcctggctcatgggagacacg-tccccgtgtggaattctgcactcagtctg-agtgacagcacacgtcagctgcctctgcacacttgtgaggg----tggagtgg-aaaggcactcgatgcttcagccgtacagggaaaccagtttgacctAAGAGTCGAGCAG----ACTCAAGAGGGG-GCCAGCACCACCTAAAAACCTTTAAGTCCTCTCAGCAGAAATCTTCA-TTCACAAGATGTTCTAC-AAATACCTTATCCTAGTCTCCATATCATTTGTGGAAGGGAAAGTTTAGATTTTATTATT-ATTTTTTAAAATTTATTATAGATACATTTAttattaaattttagtcaactttattaatcttttgatcatgtgatttttctctgta-ttttgtgaaatccacaaaatgtattcagaatatattttcttatattttcatctaaaaaatcttgcaatatttataaagtttcttggtacacctgaaaataacctttgtgtatgacttgaggtagagctcta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33525519 539 + 192294377 agcattgttgaagtgtgtggatgctcctgctgcctggctcatgggagacacg-tccccgtgtggaattctgcactcagtctg-agtgacagcacacgtcagctgcctctgcacacttgtgaggg----tggagtgg-aaaggcactcaatgcttcagccgtacagggaaaccagtttgacctAAGAGTCGAGCAG----ACTCAAGAGGGG-GCCAGCACCACCTAAAAACCTTTAAGTCCTCTCAGCAGAAATCTTCA-TTCACAAGATGTTCTAC-AAATACCTTATCCTAGTCTCCATATCATTTGTGGAAGGGAAAGTTTAGAttttattatt-attttttaaaatttattatagatacatttattattaaattttagtcaactttattaatcttttgatcatgtgatttttctctgta-ttttgtgaaatccacaaaatgtattcagaatatattttcttatattttcatctaaaaaatcttgcaatatttataaagtttcttggtacacctgaaaataacctttgtgtatgacttgaggtagagctcta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4286863 539 - 9440265 AGCATTGTTGAAGTGTGTGGATGCTCCTGCTGCCTGGCTCATGGGAGACACA-TCCCTGTGTGGAATTCTGCACTCAGTCTG-AGTGACAGCACACGTCAGCTGCCTCTGCACACTTGTGAGGG----TGGAGTGG-AAAGGCACTCGATGCTTCAGCCGTACAGGGAAACCAGTTTGACCTAAGAGTCGAGCAG----ACTCAAGAGGGG-GCCAGCACCACCTAAAAACCTTTAAGTCCTCTCAGCAGAAATCTTCA-TTCACAAGATGTTCTAC-AAATACCTTATCCTAGTCTCCATATCATTTGTGGAAGGGAAAGTTTAGATTTTATTATT-ATTTTTTAAAATTTATTATAGATACATTTATTATTAAATTTTAGTCAACTTTATTAATCTTTTGATCATGTGATTTTTCTCTGTA-TTTTGTGAAATCCACAAAATGTATTCAGaatatattttcttatattttcatctaaaaaatcttgcaatatttataaagtttcttggtacacctgaaaataacctttgtgtatgacttgaggtagagctcta i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16876202 538 - 21915920 AGCATTGTTGAAGTGTGTGGATGCTCCTGCTGCCTGGCTCATGGGAGACACG-TCCCCGTGTGGAATTCTGCACTCAGTCTG-AGTGACAGCACACGTCAGCTGCCTCGGCACACTTGTGAGGG----TGGAGTGG-AAAGGCACTTGATGCTTCAGCTGTACAGGGAAACCAGTTTGACCTAAGAGTCGAGCAG----ACTCAAGAGGGG-GCCAGCACCACCTAAAAACCTTTAAGTCCTCTCAGCAGAAATCTTCA-TTCACAAGATGTTCTAC-AAATACCTTATCCTAGTCTCCATATCATTTGTGGAAGGGAAAGTTTAGattttattatt-a-tttttaaaatttattatagatacatttattattaAATTTTAGTCAACTTTATTAATCTTTTGATCATGTGATTTTTCTCTGTA-TTTTGTGAAATCCACAAAATGTATTCAGaatatattttcttatattttcatctaaaaaatcttgcaatatttataaagtttcttggtacacctgaaaataacctttgtatatgacttgaggtagagctcta i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 16553 538 - 21531802 AGCATTGTTGAAGTGTGTGGATGCTCCTGCTGCCTGGCTCATGGGAGACACG-TCCCCGTGTGGAATTCTGCACTCAGTCTG-AGTGACAGCACTCGTCAGCTGCCTCTGCACACTTGTGAGGG----TGGAGTGG-AAAGGCACTCGATGCTTCAGCCGTACAGGGAAACCAGTTTGACCTAAGAGTCGAGCAG----ACTCAAGAGGGG-GCCAGCACCACCTAAAAACCTTTAAGTCCTCTCAGCAGAAATCTTCA-TTCACAAGATGTTCTAC-AAATACCTTATCCTAGTCTCCATATCATTTGTGGAAGGGAAAGTTTAGAttttattatt-attttttaaaatttgttatagatacatttattattaaattttagtcaattttattaatcttttgatcatgtgatttttctctgta-ttttgtgaaatccacaaaatgtattcagaatatattttcttatattttcatct-aaaaatcttgcaatatttataaagtttcttggtacacctgaaaataacctttgtgtatgacttgaggtagagctcta i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 32958 538 - 2515279 agcattgttgaagtgtgtggatgctcctgctgcctggctcatgggagacatg-tccccgtgtggaattctgcactcagtctg-agtgagagcacacgtcagctgcctcggcacacttgtgagag----tggagtgg-aaaggcactcgatgcttcagctgtacagggaaaccagtttgacctAAGAGTCGAGCAG----ACTCAAGAGGGG-GCCAGCACCACCTAAAAACCTTTAAGTCCTCTCAGCAGAAATCTTCA-TTCACAAGATGTTCTAC-AAATACCTTATCCTAGTCTCCATATCATTTGTGGAAGGGAAAGTTTAGATTTTATTATT-A-TTTTAAAAATTTATTATAGATACATTTAttattaaattttagtcaactttattaatcttttgatcatgtgatttttctctgta-ttttgtgaaatccacaaaatgtattcagaatatattttcttatattttcatctaaaaaatcttgcaatatttataaagtttcttggtacacctgaaaataacctttgtgtatgacttgaggtagagctcta i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146546174 525 - 204313951 agcattgtttaga--tgtgaatgttcctgctgcctggctgatggcagaa----tccccatgtgggattctgcattcagtctgcagtgccatcac--gtcagcttcctctgcacacttgtaagagaaatggaagtgggaaaggcactcaatgcttcagccatacaataaaatctgtttgacctAAGAGCCAAACAGATGATAGTAAGAGGGAAGTCGGCATCACTTAAAAAtctttaagtgctctcaatagaaatcttttgtttgcaagatgttttacaaaatatcttattccagtctccatagcatttgttgaatggaaagtttagattttattata---------------------gatatatttattattaaattttagacaattttactaatcgtttgatcatgtgaattttcgatgtatttttgtgaaatccacataatgttttca-aatatattttcttgcattttcatctgaaaagtcttgctatatttataaagtttctcagtccaccagaaaataagttttatgtatggcttgaggtagACATGTA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 394975 530 - 2125214 agcattgtttaga--tgtgaatgttcctgctgcctgactgatgggagacaagtttcccatgtgggattctgcattcagtctgcagtgacatcacatgtcagcttcctctgcacacttgtgagagaaatgggagtggaaaaggcaCTCAGTGCTTCAGCCATGCAAGAAAATCTGTTTGACCTAAGAGTCAAGCAGATGATAGTAAGAGGGGAGTCAACATCACTTAAAAATCTTTAAGTGCTCTCAATAGAAATCTTTTGTTTGCAAGATGTTTTGCAAAATATCTTATCCCAGTCTCCGTAGCATTTTTTGAAGGGAAAGTTTAGATTTTATTATA---------------------GATATGTTTATTATTAAATTTTAGACAATTTTACT-ATCTTTTGATCATGTGATTTTTCTATGTATTTTTGTGAAATCCACATAATGTTTTCA-AATATATTTTCTTATATTTCCATCTAAAAAGTCTTGCTATATTTATAAGGTTTCTCTGTCCACCTGAAAATAAACTTTATGTATGGCTTGAGGTAGACATGTA i cebCap1.NW_016107703v1 I 2950 I 10 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I a score=110493.000000 s hg38.chr7_KI270899v1_alt 45058 50 + 190869 aaggtatcttttttcaaaatgaagagccaattgcccaaacgattgggcac s gorGor5.CYUI01015914v1 5648 50 - 432965 aaggtatcttttttccaaatgaagagccaattgcccaaacgattgggcac i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 69034 50 + 85365473 aaggtatcttttttccaaatgaagagccaattgcccaaacgattgggcaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33910095 41 + 185818997 aaggtatcttttttccaaatgaagagccagctgcccaaaca--------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33526058 41 + 192294377 aaggtatcttttttccaaatgaagagccagctgcccaaaca--------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4287402 41 - 9440265 aaggtatcttttttccaaatgaagagccagctgcccaaaca--------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16876740 41 - 21915920 aaggtatcttttttccaaatgaagagccagctgcccaaaca--------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 17091 41 - 21531802 aaggtatcttttttccaaatgaagagccagctgcccaaaca--------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 33496 41 - 2515279 aaggtatcttttttccaaatgaagagccagctgcccaaaca--------- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146546699 12 - 204313951 ------------TTTAACATCATG-------------------------- i calJac3.chr2 C 0 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cebCap1.NW_016107703v1 395505 10 - 2125214 I a score=1120916.000000 s hg38.chr7_KI270899v1_alt 45108 256 + 190869 tttatttgttttctaatagactaagtttcaacacagaagagggtcttctttggtgctctgtactcttttcctttggtctatttttctcttctaccaagatatcatgtggctgtaattgcaatggatttatatggtgtgcttatatctggtgtaatgtatcctc--gacttactttttctcctttaaaagtatcttggttattattgtcctgtattgtttttggagtcagccagtcaagttttaaaaaacacgtaaaca s gorGor5.CYUI01015914v1 5698 256 - 432965 tttatttattttctaatagactaagtttcaacacagaagagggtcttctttggtgctctgtactcttttccattggtctatttttctcttctaccaagatatcatgtggctgtaattgcaatggatttatgtggtgtgcttgtatctggtgtaatgtatcctc--gacttactttttctcctttaaaattatcttggttattattgtcccgtattgtttttggagtcagccagtcaagtttgaaaaaacatgtaaaca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 69084 258 + 85365473 tttatttattttctaatagactaagtttcgacacataagagggtcttctttggtgctctgtactcttttccgttggtctatttgtctcttctacaaagatatcatgtggctgtaattgcaatggatttatatggtgtgtttacatctggtataatgtatcctctgaacttactttttctcctttaaaattatcttggttattcttgcccagtattgtttttggagtcagccagtcaagttttaaaaaacacgtaaaca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33910136 255 + 185818997 tttatttattttctaacaggcgaagtgttggcacatggga-ggtcttctttggtgctctgtattcttttccattggtctatttgtctcttctacaaagatatcatgtggctgtgattgcaatgggtttatctgatgtgctcatatgtgggataatgtatcctg--aacttactttttctcctttcaaattatctttgttattcttgtcctgtattgcttttggagtcagccagtcaagttttaaaaagcacgtaaaca i rheMac8.chr3 C 0 I 2 s macFas5.chr3 33526099 256 + 192294377 tttatttattTTCTAACAGGCGaagtgttggcacatgggagggtcttctttggtgctctctattcttttccattggtctatttgtctcttctacaaagatatcatgtggctgtgattgcaatgggtttatctgatgtgttcatatgtgggataatgtatcctg--aacttactttttctcctttcaaattatctttgttattcttgtcctgtattgcttttggagtcagccagtcaagttttaaaaagcacgtaaaca i macFas5.chr3 C 0 I 2 s macNem1.NW_012019910v1 4287443 256 - 9440265 tttatttattttctaacaggtgaagtgttggcacatgggagggtcttctttggtgctctgtattcttttccattggtctatttgtctcttctacaaagatatcatgtggctgtgattgcaatgggtttatctgatgtgttcatatgtgggataatgtatcctg--aacttactttttctcctttcaaattatctttgttattcttgtcctgtattgcttttggagtcagccagtcaagttttaaaaagcatgtaaaca i macNem1.NW_012019910v1 C 0 I 2 s cerAty1.NW_012002954v1 16876781 256 - 21915920 tttatttattttctaacaggtgaagtgttggcacatgggagggtcttctttggtgctctgtattcttttccattggtctatttgtctcttctacaaagatatcatgtggctgtgattgcaacgggtttatctgatgtgttcatatctgggataatgtatcctg--aacttactttttctcctttcaaattatctttgttattcttgtcctgtattgcttttggagtcagccagtcaagttttaaaaagcacgtaaaca i cerAty1.NW_012002954v1 C 0 I 315 s chlSab2.chr28 17132 256 - 21531802 tttatttattTCCTAATAGGCGaagtgttggcacatgggagggtcttctttggtgctctgtattcttttccattggtctatttgtctcttctacaaagatatcatgtggctgtgattgcaacaggtttatctgatgtgttcatatctgggataatgtatcctg--aacttactttttctcctttcaaattatcttggttattcttgtcctgtattgcttttggagtcagccagtcaagttttaaaaagcacgtaaaca i chlSab2.chr28 C 0 I 2 s manLeu1.NW_012101810v1 33537 256 - 2515279 tttatttattttctaacaggtgaagtgttggcacatgggagggtcttctttggtgctctgtattcttttccattggtctatttgtctcttctacaaagatatcatgtggctgtgattgcaacgggtttatctgatgtgttcatatctgggataatgtatcctg--aacttactttttctcctttcaaattatctttgttattcttgtcctgtattgcttttggagtcagccagtcaagttttaaaaagcacgtaaaca i manLeu1.NW_012101810v1 C 0 I 2 s calJac3.chr2 146546711 253 - 204313951 --TATTTATtttctaatagactaagttttgacacatgagagggtcttctttggtggtctgtattcttttccattggtctatttgtctcttctacgaagatatcatgtagctgtaattgcactggatttatatgatgtgtttatatctggtataatgtatcctg--aacttactttttctcctttaaaattatcttggttattcctgtcccctattgtttttggagtcatacagtcaagttttaaaaa-cacataagca i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 395515 255 - 2125214 TGTATTTATtttctaacagactaagttttgacacatgagagggtcttctttggtggtctgtattcatttccattggtctatttgtctcttctacaaagatatcatgttgctgtaattgcattggatttatatgatgtgtttatatctggtataatgtatcctg--aacttactttttctcctttaaaattatcttggctattcctgtcccctattgtttttggagtcagacagtcaagttttaaaaa-cacataaaca i cebCap1.NW_016107703v1 I 10 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I a score=2499642.000000 s hg38.chr7_KI270899v1_alt 45364 602 + 190869 -gatgcaggtgaacgtgtccccatgggtgtgtgcttggtgggaactgcatcaaattcatcacctcacttggggagacttcatcgctttaccatgcaggtctcaccacacctccccatttatagacatctttaaaaatattcttcactgatatctttattttttcataaagttattacccttgtcttagttgatgtattcctaggtaactgataacttttgttgatgtcaaatgaaattg----ctttttataattATGAATTGGGTACTGCTGATAGTTTTGTTTACTAGTCTTGT-GTCCAGTTGAACTCTCTTATTTGTTATGACCTTTTAAAATGTAGATTTTTATAGGGTCAATAaagaatgatggtttccttttattcctgacccattgttccacatttagttcattttcttgcattattgcacaagccggtaactctacccga-ggttgcatagaaagggtacatagaaagggcatatctttgccttgctcctacctcccaaaggcagtttctgaagcttcactgtcacatgtggtggctgctTTTTCTAGTCTATGATTTAGATGCTGCTTTTGCATCAACTTAGCTGTGGAtttttttttt-- s gorGor5.CYUI01015914v1 5954 601 - 432965 -gatgcatgtgaacgtgtccccatgggtgtgtgcttggtgggaactgcgtcaaatccatcgcctcacttggggagacttgatcgctttaccgtgcaggtctcaccacacctccctatttatagacatctttaaaaatatcattcactgatatctttattttttcataaagttattacccttgtcttagttgatgtattcctaggtaactgataacttttgttgatgtcaaatgaaattgtttgctttttataattatgaattgggtactgctgatagttttgtttactagtcttgt-gtccagttgagctctcttatttgttatgaccttttaaaatgtagatttttatagggtcaataaagaatgatggtttccttttattcctgacccatttttccacatttagttcattttcttgcattattgcacaagccggtaactctaccaga-ggttgtatagaaagggta-----gaagggcatatctttgccttgctcctacatcccaaagggagtttctgaagcttcactgtcacatgtgatggctgctTTTTCTAGTCTATGATTTAGATGCTGCTCTTGCATCAACTTAGCTGTGGAtttttttttt-- i gorGor5.CYUI01015914v1 C 0 I 2 s nomLeu3.chr20 69342 600 + 85365473 -gatgcatgtgaacgtgtccccatgggtgtgtgcttggtgggaactgcatcgaattcatcaccttacttggggagacttggtcactctaccatgcaggtctcaccacacctccccatttatagacatctttaaaaatattcttcactgatattttcattttttcctaaagttattacacttgtcttacttgatgtattcctaggtaactgataacttttgttgatgtcaaatgaaattgtttgctttttataattatgaattgggtactgcggatagttttgtttactggtcttgt-gtccagttgaactctcttatttgttatga-cttttaaaatgtagattttcatagtgtcattaaagaatgacggtttcctcttattcctgacccattgttccacatatagttcattttcttgcattattgcacaagctggtaactctaccaga-ggttgcatagaaagggta-----gaagggcatatctttgccttgctcctacctcccaaagggagtttctgaagcttcactctcacatgtgatggctgctTTTTCTAGTCTGTGATTTAGATGCCGCTCTTGCATCAGCTTAGCCATGGAtttttttttt-- i nomLeu3.chr20 C 0 I 4 s rheMac8.chr3 33910393 594 + 185818997 -gatgcatgtgaaggtgcccccagggctgtg-gctt-gtgggaacagcattgac-tcatgacctcacttggggagacctgatcgctttaccccgcaggtctccccacacctccccttttatcgagatctttaaaagtattctgcaccaatctttttatttttccataaagctgttacacttctcttacttggtgtattcctaggtaactgagaac-tttgttgatgtcaaatgaaattgtttgttttttataattatgaattgggtactgctgacagttttgtttactggtcttgt-gtccagttgaactctcttatttgttatgaccgtttaaaatgtagattttcatagtgtcagtaaagaatgatggtttcgtcttattcctgacccactgttccacagttagttcattttcttgcattattgcacaagctaggaactctaccaga-ggttgcatagaaagggta------gagggcatatctttgccttgctcccacctccaaaagagagtttctgaagcttcactctcacatgtgatggctgctTTTTCTAGTCTATGATTTAGGTGCTGCTCTTGCATCAAGTTAGCCATGGGCTGttttt---- i rheMac8.chr3 I 2 C 0 s macFas5.chr3 33526357 595 + 192294377 -gatgcatgtgaaggtgcccccagggctgtg-gctt-gtgggaacggcattgacttcatgacctcacttggggagacctgatcgctttaccccgcaggtctccccacacctccccttttatcgagatctttaaaagtattctgcaccaatctttttatttttccataaagctgttacacttctcttacttggtgtattcctaggtaactgagaac-tttgttgatgtcaaatgaaattgtttgttttttataattatgaattgggtactgctgacagttttgtttactggtcttgt-gtccagttgaactctcttatttgttatgaccgtttaaaatgtagattttcatagtgtcagtaaagaatgatggtttcgtcttattcctgacccactgttccacagttagttcattttcttgcattattgcacaagctaggaactctaccaga-ggttgcatagaaagggta------gagggcatatctttgccttgctcctacctccaaaagagagtttctgaagcttcactctcacatgtgatggctgctTTTTCTAGTCTATGATTTAGGTGCTGCTCTTGCATCAAGTTAGCCATGGGCttttttt---- i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 4287701 595 - 9440265 -gatgcatgtgaaggtgcccccagggctgtg-gctt-gtgggaacggcattgacttcatgacctcacttggggagacctgatcgctttaccccgcaggtctccccacacctccccttttatcgagatctttaaaagtattctgcaccaatctttttatttttccataaagctgttacacttatcttacttggtgtattcctaggtaactgagaac-tttgttgatgtcaaatgaaattgtttgttttttataattatgaattgggtactgctgacagttttgtttactggtcttgt-gtccagttgaactctcttatttgttatgaccgtttaaaatgtagattttcatagtgtcagtaaagaatgatggtttcgtcttattcctgacccactgttccacagttagttcattttcttgcattattgcacaagctaggaactctaccaga-ggttgcatagaaagggta------gagggcatatctttgccttgctcctacctccaaaagagagtttctgaagcttcactctcacatgtgatggctgctTTTTCTAGTCTATGATTTAGGTGCTGCTCTTGCATCAAGTTAGCCATGGGCttttttt---- i macNem1.NW_012019910v1 I 2 C 0 s cerAty1.NW_012002954v1 16877352 592 - 21915920 -gatgcatgtgaaggtgcccccagggctgtg-gctt-gtgggaacggcattgacttcatgacctcacttggggagacctgatcactttaccccgcaggtctccccacacctccccttttatcgagagctttaaaagtattctgcaccaatctttttatttttccgtaaagctgttacacttctcttacttggtgtattcctaggtaactgagacc-tttgttgatgtcaaatgaaa----ttgttttttataattatgaattgggtactgctgacagttttgtttactggtcttatggtccagttgaactctcttatttgttatgaccttttaaaatgtagattttcatagtgtcagtaaagaatgatggtttcgtcttattcctgacccactgttccacagttagttcattttcttgcattattgcacaagccaggaactctaccaga-ggttgtgtagaaagggta------gagggcatatctttgccttgctcctacctccaaaagagagtttctgaagcttcactctcacatgtgatgtctgctTTTTCTAGTCTATGATTTAGGTGCTGCTCTTGCATCAAGTTAGCCATGCGCtttttta---- i cerAty1.NW_012002954v1 I 315 C 0 s chlSab2.chr28 17390 595 - 21531802 -gatgcatgtgaaggtgcccccaggactgtc-gctt-gtgggaacggcatggacttcatgatctcacttggggagacctgatcgctttaccccacaggtctccccacacctccccttttatcgagatctttaaaagtattctgcaccaatctttttatttttccataaagctgttacacttctcttacttggtgtattcctaggtaactgagaac-tttgttgatgtcaaatgaaattgtttgttttttataattatgaattgggtactgctgacagttttgtttactggtcttgt-gtccagttgaactctctcatttgttatgaccttttaaaatgtagattttcatagtgtcagtaaagaatgatggtttcatcttattcctgacccattgttccacagttagttcattttcttgcattattgcacaagccaggaactctaccaga-ggttgcatagaaagggaa------gagggcatatctttgccttgctcctacctccaaaagagagtttctgaagcttcactctcacatgtgatggctgctTTTTCTAGTCTATGATTTAGGTGCTGCTCTTGCATCAAGTTAGCCATGGACttttttt---- i chlSab2.chr28 I 2 C 0 s manLeu1.NW_012101810v1 33795 592 - 2515279 -gatgcatgtgaaggtgcccccagggctgtg-gctt-gtgggaacggcattgacttcatgacctcacttggggagacctgatcgctttaccccgcaggtctccccacacctccccttttatcgagagctttaaaagtattctgcaccgatctttttatttttccataaagctgttacacttctcttacttggtgtattcctaggtaactgagacc-tttgttgatgtcaaatgaaa----ttgttttttataattatgaattgggtactgctgacagttttgtttactggtcttgtggtccagttgaactctcttatttgttatgaccttttaaaatgtagattttcatagtgtcagtaaagaatgatggtttcgtcttattcctgacccactgttccacagttagttcattttcttgcattattgcacaagccaggaactctaccaga-ggttgtgtagaaagggta------gagggcatatctttgccttgctcctacctccaaaagagagtttctgaagcttcactctcacatgtgatggctgctttttctagTCTATGATTTAGGTGCTGCTCTTGCATCAAGTTAGCCATGCGCtttttta---- i manLeu1.NW_012101810v1 I 2 C 0 s calJac3.chr2 146546964 603 - 204313951 aaatgcatgtgaatgtctccccatgggtgtgtgcttgattgcaattgcatcgatttcatcacttcacttggggagacttgatcactttaccatgcaagtctcaccacacctcgccatttatggagatctttaaaaatgttcttcactgatatttttatcttttcataaatttattacacttctcttatttgatgtattcctaggtaactgagactttttattgatgtcaaatgaaattgtttgcttgttagaattatgcattgggtactgctgatacttttatattctgggcttgt-gtccaattgaactctcttatttgttatgaccttttaaaatgtagattttcaaagtgtcaacaaagaatgatagtttcctcttattcctgacctattgttctacaattagtttattttcttgtgttattgcacaagcaagtaattctaccagacgtttgcatagaaagagta-----gaagggcacatctttgccttgctcctacctctaaaagggaatttctgaagcttcactctcacctgtgatggctgctttttcaagtctatgatttagatactGCTCTTGCATCAACTTAGCCATGGAtttttttt--gt i calJac3.chr2 C 0 I 1 s cebCap1.NW_016107703v1 395770 596 - 2125214 aagatgatgtgaatgtctccccatgggtgtgtgcttgattgcaattgcatcgatttcatcacttcacttggggagacttgatcactttaccaagcaagtctcaccacacctctccatttatagagatctttaaaaatgttcttgactgatatttttattttttcataaagttattacacttctcttatttgatgtattcctaggtaactgagacattttattgatgtcaaatgaaattgtttgcttgttataattatgcattgggtacggttgataattttgtatgctgggcttgt-gtccagttgaactctc----ttgttaTGACCTTTTAAAatgtagattttcatagtgtcaacaaagaatgatagtttcctcttattcctgacccattgttctacaattagtttgttttcttgcattattgcacaagcaagtaactctaccaga-ggttacatagaaagagta-----gaagggcacatctttgccttgctcctacctctaaaagggaaTTTCTGAAGCTTCACTCACAC--GTGATGGCTGCTTTTTCAAGTCTATGATTTAGATCCTGCTCTTGCATCAACTTAGCCATGGAtttttttt--tt i cebCap1.NW_016107703v1 C 0 I 160 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I a score=139922.000000 s hg38.chr7_KI270899v1_alt 45966 39 + 190869 aatgaagtttcactctgttccccagcctggagtgcagtt s gorGor5.CYUI01015914v1 6557 39 - 432965 aatgaagtctcactctgttgcccagcctggagtgcagtc i gorGor5.CYUI01015914v1 I 2 C 0 s nomLeu3.chr20 69946 39 + 85365473 aatgaagtctcaccctgttgcccagcctggagtgcagtc i nomLeu3.chr20 I 4 C 0 s rheMac8.chr3 33910987 39 + 185818997 aatgaagtctcactctgttgcccaggctggagtgaagcg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33526952 39 + 192294377 aatgaagtctcactctgttgcccaggctggagtgaagcg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4288296 39 - 9440265 aatgaagtctcactctgttgcccaggctggagtgaagcg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16877944 39 - 21915920 aatgaagtctcactctgttacccaggctggagtgaagca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 17985 39 - 21531802 aatgaagtctcactctgttgcccaggctggagtgaagca i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 34387 39 - 2515279 aatgaagtctcactctgttgcccaggctggagtgaagcg i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146547568 39 - 204313951 aatcaagtctcactctgttgcccagactggagtacagtg i calJac3.chr2 I 1 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I e cebCap1.NW_016107703v1 396366 160 - 2125214 I a score=57236.000000 s hg38.chr7_KI270899v1_alt 46005 14 + 190869 gtgcaatc-ttagct s gorGor5.CYUI01015914v1 6596 14 - 432965 gtgcaatc-ttagct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 69985 14 + 85365473 gtgcaatc-ttagct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33911026 14 + 185818997 gtgcaatc-gtagct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33526991 14 + 192294377 gtgcaatc-gtagct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4288335 14 - 9440265 gtgcaatc-gtagct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16877983 14 - 21915920 gtgcaatc-gtagct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 18024 14 - 21531802 gtgcaatc-gtagct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 34426 14 - 2515279 gtgcaatc-gtagct i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146547607 15 - 204313951 ttgcaatcattagct i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 396526 15 - 2125214 gtgcaatcattagct i cebCap1.NW_016107703v1 I 160 C 0 e otoGar3.GL873611 2100705 1026 - 8137123 I e canFam3.chr6 60958126 1313 - 77573801 I a score=5896934.000000 s hg38.chr7_KI270899v1_alt 46019 1243 + 190869 cctgcaggcCTAAGTGCTCTCTATAAACCCCAAGTGCAGCAGGCGGGAGGAGACTCTGGCTATGCACAAAGTTTGCTGGTGGGAGGACAGAGCCAGGAACTCTGTGTGTGTCAGTAAAATGTTGGGGTGACAGTCACCTGGGGGGAAAGCCATCACAGAGGcactgacatgagctgtgtgcattgggcagtctctccacctccaagggcctc-agtgtcctcTCAGGTGTGAGGGTCAGTGGTCCCCGTGGCCTACTGCCACATTCATTGAAATGCTACATGTCCAGAATATGCTATTTACT-GGGGGGATAAAGGGAAAGAAATATACTTTGCGCATATTTCATACGGAAGACAATAGTGATAATGCTTCAATTAGTGCATTGGAGATGCCAGGTTGATTGTAAATGAAATTGTGCTGAGATCTCAGCTCTGCACCATAATTGCACTAAGTTTTTTGAATAGAAAACACTTTATCAAAGTTGTGACTTAGTGAGGAGAGATTGCTAATGTTTTTTGCAATGGAGTCTGTTGCTTTATCA---CATCAAAGATTTTGTTACAAATGCATGCCAGGTGACCTATGAAGTCATAAGCCTGCAGTAACTCACCTGGCTGGTGTAGAGGAGTGT-AATTCTAACACGGCCATCCCTGTGGTAAGGGGAAAGGAAAACACTGAAAGGTTGCTTCTCTGTGAACAGAGTGGC-TGTTTCCAGGTTTCTGACCCCAAGGACGTGGGTTCCAGTGGACACAGTGAGCCAGGCTGTGGGGTTACACAGCATGTACCATGATGATGGGG-GTTCCTTCCTCTTAGGACTCAACACGCCCAGGGCCCTCTGGAAGCACACTCTGGAAGCTGTCCTTCTGCTCTGTTGAGGGGTA--------------------------------------AAGAGTTGGTGAATCACCCCCAACCCCTCTAGTCCTTACTCAGTTTCCATCTAACACTACAGATGG---GGcctcattatacagatgcagaaacagagaccctgagagaggtctggccaggctgaggcccacagtgagttcgtgataaggtaggaccagagcctgggtctcaggctcacggtgctctctgtgaccccactAGGTCAATCCTCTGTAACCTGCTTTAAGGGAAACAGGGTGGGGCCACACTCCCCGCAGCTCAGTCTGACCCTGTGGATCTGTGGCCTGAGAGTAGGACACATGCACCAGAATAGGTGATTCGGAGCCTGTGGTCCACTCTCAGCCTGTGTCCCCCA-CCCCACAGGC---AGGGC s gorGor5.CYUI01015914v1 6610 1243 - 432965 actgcaggcCTAAGTGCTCTCTATAAACCCCAAGTGCAGCAGGTGGGAGGAGACTCTGGCTATGCACAGAGTTTGCTAGTGGGAGGACAGAGCCAGGAACTCTGTGTGTGTCAGTAAAATGTTGGGGTGACAGTCACCTGGGGGGAAAGCCATCACAGAGGcactgacatgagctgtgtgcattgggcagtctctccacctccatgggcctc-agtgtcctcTCAGGTGTGAGGGTCAGTGGTCCCCGTGGCCTACTGCCACATTCATTGAAATGCTACATGTCCAGAATATGCTATTTATT-GGGGGGATAAAGGGAAAGAAATATACTTTGCGCATATTTCATACGGAAGACAATAGTGATAATGCTTCAGTTAGTGTGTTGGAGATGCCAGGTTGATTGTACATGAAATTGTGCTGGGATCTCAGCTCTGCACCATAATTGCACTAAGCTTTTTGAATAGAAATCACTTTATCAAAGTTGTGATTTAGTGAAGAGAGATTGCTAATGTTTTTTGCAATGGAGTCTGTTGCTTTATCA---CATCATAGATTTTGTTACAAATGCATGCCGGGTGACCTATCAAGTCATAAGGCTGCAGTAACTCACCTGGCTGGTGTAGAGGAGTGT-AATTCTAACACGGCCATCCCTGTGGTAAGGGGAAAGGAAAACATTGAAAGGTTGCTTCTCTGTGAACAGAGTGGC-TGTTTCCAGGTTGCTGACCCCAAGGACGTGGGTTCCAGTGGACACAGTGAGCCAGGCTGTGGGGTTACACAGCATGTACCATGATGATGGGG-GTTTCTTCCTCTTAGGACTCAACGGGCCCAGGGCCCTCTGGAAGCACACTCTGGAAGCTGTCCTTCTGCTCTGTTGAGGGGTA--------------------------------------AAGAGTTGGTGAATCACCCCCAACCCCTCTAGTCCTTACTCAATTTCCATCTAACATTGCAGATGG---GGcctcattatacagatgcagaaacagagaccctgagagaggtctggccaggctgaggcccacagcgagttcgtgataaggtaggaccagagcctgggtctcaggctcacggtgctctctgtgaccccactAGGTCAATCCTCTGTAACCTGCTTTAAGGGAAACAGGGTGGGGACACACTCCCCGCAGCTCAGTCTGACCCTGTGGATCTGTGGCCTGAGGGTAGGACACATGCACCAGAAGAGGTGATTCGGAGCCTGTGGTCCACTCTCAGCCTGTGTCCCCCA-CCCCACAGGC---AGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 69999 1230 + 85365473 actacaggTCTAAGTGCTTTTTATGAACCCCAAGTGCAGCAGGTGGGAGGAGACTCTGGCTATGCACAGAGTTTGCTGGTGGGAGGACAGAGCCAGGAACTCTGTGTGTGTCAGTAAAATGTTGGGGTGACAGTCACC-GGGGGGAAAGCCATCACAGAGGcactgacatgagctgtgtgcattgggcagtctctccacctccatgggcctc-agcatgctcTCAGGTGTGAGGGTCAGTGGTCCCCGTGGCCTACTGCCACATTCATTGAAATGCTACATGTCCAAAATATGCTATTTATTGGGGGGGATAAAGGGAAAGAAATATACTTTGCACATATTTCATATGGAAGACAACAGTGATAATGCTTCAGTTAGTGCGTTGGAGATGCCAGGCTGATTGTAAATGAAACTGTGCTGGGATCTCAGCTCTGCACCATAATTGCACTAAGTCTTTTGAATAGAAATCACTTTATCAAAGTTGTGATTTAGCGAGGAGAGATTGCTAATGTTTTTTGCAATGGAGTCTGTTGCCTTATCA---CATCACAGATTTTGTTACAAATGCATGCCAGGTGACCTATCAAGTCGTAAGGCTGCAGTAACTCACCTGGCTGGTGTAGAGGACTGT-AATTCTAACACTGCCATCCCTGTGGTAAGGG--------------GAAAGGTTGCTTCTCTGTGAACAGAGTGGC-TGTGTCCAGGTTGCTGACCCCAAGGACGTGGGTTCCAGTGGACACAGTGAGCCAGGCTGT-GGGTTACACAGCATGAACCATGATGGT-GGG-CTCTCTTCCTCTTAGGACTCAACAGGCCCAGGGCCCTCTGGAAGCACACTCTGGAAGCTGTCCTTCTGCTCTGTTGAGGGGTA--------------------------------------AAGAGTCAGTGAATCACCTGCCATCCCTCTAGTCCTTACTCAATTTCCATCCAACACTATAGATGG---GGcctcgttatacagatgcagaaacagagaccccgagagaggtgtggccagactgaggcccacagtgagttcgtgataaggtaggaccagagcctgggtctcaggcccatggtgctgtctgtgacgccactaggtcagTCCTCTGTAACCTGCTTCAAGGGAAACAGGGTGGGGCCACACTCCCCGCAGCTCGGTCTGACCCTGTGGGTCTGTGGCCTGAGAGCAGGACACACGCACCAGAAGAGGTGACCCGGATCCTGTGGTCCACTCTGAGCCCGTGTCCCCCA-CCCCGCAGGCAGGAGGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33911040 1239 + 185818997 actgcagGCCTAAGTACTCTTTATAACCCCCAAGTGCAGCAGCGGGGAGGAGACTCTGGTAATGCGC--AGTTTGCTGGTGGCAGGAGGGAGCCAGGAGCTCTGTGTGTGTCAGTAAGATGTTGGGGTGACAGTCACT-GGGGGCAAAGCCATCACAGAGGcactgacatgagctgtgtgcactgggcagtctctccacctccatgggcctc-aggatcctctcaggtgtgagggtcggTGGTCCCCGTGGCCTTCTGCCACATTCATTGGAATGCTACATGTCCAGAATATGCTATTTCCTGGGTGGGATAAAGGGAAGGAAATATACTTTGTGCGTATTTCACAAGGAAGACAATAGCGATAATGCTTCAGTTAGTGCATTGGAGACGCCAGGTTGATTGTAAATGAAATTGTGCTGGGATCTCAGCTCTGTACCATAATTGCACTACGTCTTTTGAATGGAAATCACTTTATCAAAGTTGTGATTTAGTGAGGAGAGATTGCTAATGTTTTTTGCAATGGAGTCTGTGGCTTTATTA---CTTCATAGATTTCGTTACAAATG-ATGCCAGCTGACCTGTCAAGTCATAAGGCCGCAGTCACTCACCTGGCTGGTGTAGGGGAGTGT-AGTTCTAACACTGCCATCCCTGAGGTAAGGAGAAAGGGAAACCAGGAAAAGTTGCTTCTCTGTGAACAGCATGGC-TGTGTCCAGGTTGCTGACCCCAAGGACGGTGGTTCCAGCGGACACAGTGAGCCAGGCTGTTGGGTTGCACAGCACGCACCATGATAATGGGA-GTTTCTTCCTCCTAGGACTCAATGGGCCCAGGGCCCTCTGGAAGGACTCTCTGGACGCTGTCTTTCTGCTCTGTTGAGGGATA--------------------------------------TGGAGTTGGTGAACC-CCCCCTATCCCTCTAGTCCTTACTCAATTTCCATCCAACACTATAGATGC---AGcctcattatacagatggggaaacagagacctggagagaggtctggccaggctgaggcccacagtaagttcatgataaggtaggaccagagcctgggtctcaggctcatggtgctctctgtgaccccactAGGTCAATCCTCTATACCCTACTTTAAGGGAAACAGGGTGGGGCTGTGCTCCCTGCCGCTCGGCCTGACCCTGTGAATGTGTGGCCTGAGAGCAGGACATGTGCACCAGAAGAGGTGATCCGGAGCTTGTGGTCCACTCTGAGCCTGTGTCCCCCA-ACCCGCAGGC---AGGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33527005 1241 + 192294377 actgcagGCCTAAGTGGTCTTTATAACCCCCAAGTGCAGCAGCGGGGAGGAGACTCTGGTAATGCGC--AGTTTGCTGGTGGCAGGATGGAGCCAGGAGCTCTGTGTGTGTCAGTAAGATGTTGGGGTGACAGTCACC-GGGGGCAAAGCCATCACAGAGGcactgacatgagctgtgtgcactgggcagtctctccacctccatgggcctc-aggatcctctcaggtgtgagggtcggTGGTCCCCGTGGCCTTCTGCCACATTCATTGGAATGCTACATGTCCAGAATATGCTATTTCCTGGGTGGGATAAAGGGAAGGAAATATACTTTGTGCGTATTTCACAAGGAAGACAATAGCGATAATGCTTCAGTTAGTGCATTGGAGACGCCAGGTTGATTGTAAATGAAATTGTGCTGGGATCTCAGCTCTGCACCATAATTGCACTACGTCTTTTGAATGGAAATCACTTTATCAAAGTTGTGATTTAGTGAGGAGAGATTGCTAATGTTTTTTGCAATGGAGTCTGTGGCTTTATTA---CTTCATAGATTTCGTTACAAATGCATGCCAGCTGACCTGTCAAGTCATAAGGCCGCAGTCACTCACCTGGCTGGTGTAGGGGAGTGT-AGTTCTAACACTGCCATCCCTGAGGTAAGGAGAAAGGGAAACCAGGAAAAGTTGCTTCTCTGTGAACAGCATGGC-TGTGTCCAGGTTGCTGACCCCAAGGACGGTGGTTCCAGCGGACACAGTGAGCCAGGCTGTTGGGTTGCACAGCACGCACCATGATAATGGGA-GTTTCTTCCTCCTAGGACTCAATGGGCCCAGGGCCCTCTGGAAGGACTCTCAGGACGCTGTCTTTCTGCTCTGTTGAGGGATA--------------------------------------TGGAGTTGGTGAACCACCCCCTATCCCTCTAGTCCTTACTCAATTTCCATCCAACACTATAGATGC---AGcctcattatacagatggggaaacagagacctggagagaggtctggccaggctgaggcccacagtaagttcatgataaggtaggaccagagcctgggtctcaggctcatggtgctctctgtgACCCCACTAGGTCAATCCTCTATACCCTACTTTAAGGGAAACAGGGTGGGGCTGTGCTCCCTGCCGCTCGGCCTGACCCTGTGAATGTGTGGCCTGAGAGCAGGACATGTGCACCAGAAGAGGTGATCCGGAGCTTGTGGTCCACTCTGAGCCTGTGTCCCCCA-ACCCGCAGGC---AGGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4288349 1240 - 9440265 actgcagGCCTAAGTGCTCTTTATAACCCCCAAGTGCAGCAGCGGGGAGGAGACTCTGGTAATGCGC--AGTTTGCTGGTGGCAGGATGGAGCCAGGAGCTCTGTGTGTGTCAGTAAGATGTTGGGGTGACAGTCACC-GGGGGCAAAGCCATCACAGAGGcactgacatgagctgtgtgcactgggcagtctctccacctccatgggcctc-aggattctctcaggtgtgaGGGTCGGTGGTCCCCGTGGCCTTCTGCCACATTCATTGGAATGCTACATGTCCAGAATATGCTATTTCCTGGGTGGGATAAAGGGAAGGAAATATACTTTGTGCGTATTTCACAAGGAAGACAATAGTGATAATGCTTCAGTTAGTGCATTGGAGACGCCAGGTTGATTGTAAATGAAATTGTGCTGGGATCTCAGCTCTGCACCATAATTGCACTACGTCTTTTGAATGGAAATCACTTTATCAAAGTTGTGATTTAGTGAGGAGAGATTGCTAATGTTTTTTGCAATGGAGTCTGTGGCTTTATTA---CTTCATAGATTTCGTTACAAATGCATGCCAGCTGACCTGTCAAGTCATAAGGCCGCAGTCACTCACCTGGCTGGTGTAGGGGAGTGT-AGTTCTAACACTGCCATCCCTGAGGTAAGGAGAAAGGGAAACCAGGAAAAGTTGCTTCTCTGTGAACAGCATGGC-TGTGTCCAGGTTGCTGACCCCAAGGACGGTGGTTCTAGCGGACACAGTGAGCCAGGCTGTTGGGTTGCACAGCACGCACCATGATAATGGGA-GTTTCTTCCTCCTAGGACTCAATGGGCCCAGGGCCCTCTGGAAGGACTCTCTGGATGCTGTCTTTCTGCTCTGTTGAGGGATA--------------------------------------TGGAGTTGGTGAACCACCCCCTATCCCTCTAGTCcttactcaatttccatccaacactatagatgc---agcctcattatacagatggggaaacagagacctggagagaggtctggccaggctgaggcccacagtaagttcatgataaggtaggaccagagcctgggtctcaggctcatggtgctctctgtgaccccactaggtcaATCCTCTATACCCTACTTTAAGGGAAACAGGGTGGGGCTGTGCTCCCTGCCGCTCAGCCTGACCCTGTGAATGTGTGGCCTGAGAGCAGGACATGTGCACCAGAAGAGGTGATCCGGAGCTTGTGGTCCACTCTGAGCCTGTGT-CCCCA-ACCCGCAGGC---AGGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16877997 1241 - 21915920 actgcagGCCTAAGTGCTCTTTATAACCCCCAAGTGCAGCAGCGGGGAGGAGACTCTGGTAATGCGC--AGTTTGCTGGTGGCAGGACGGAGCCAGGAGCTCTGTGTGTGTCAGTAAGATGTTGGGGTGACAGTCACC-GGGGGCAAAGCCATCACAGAGGcactgacatgagctgtgtgcactgggcagtctctccacctccatgggcctc-aggatcctctcaggtgtgagggtcggTGGTCCCCGTGGCCTTCTGCCACATTCATTGGAATGCTACATGTCCAGAATATGCTATTTCCTGGGTTGGATAAAGGGAAGGAAATATACTTTGTGCGTATTTCACATGGAAGACAACAGCAATAATGCTTCAGTTAGTGCATTGGAGACGCCAGGTTGATTGTAAATGAAATTGTGCTGGGATCTCAGCTCTGCACCATAATTGCACTACGTCTTTTGAATGGAAATCACTTTATCAAAGTTGTGATTTAGTGAGGAGAGATTGCTAATGTTTTTTGCAATGGAGTCTGTGGCTTTATTG---CTTCATAGATTTCGTTACAAATGCATGCCAGCTGATCTGTCAAGTCATAAGGCCGCAGTCACTCACCTGGCTGGTTTAGGGGAGTGT-AGTTCTAACACTGCTGTCCCTGAGGTAAGGAGAAAGGGAAACCAGGAAAAGTTGCTTCTCTGTGAACAGCATGGC-TGTGTCCAGGTTGCTGACCCCAAGGACGGTGGTTCCAGCGGACACAGTGAGCCAGGCTGTTGGGTTGCACAGCACGCACCATGATAATGGGA-GTTTCTTCCTCCTAGGACTCAATGGGCCCAGGGCCCTCTGGAAGGACTCTCTGGACGCTGTCTTTCTGCTCTGTTGAGGGATA--------------------------------------TGGAGTTGGTGAACCACCCCCTATCCCTCTAGTCcttactcaatttccatccaacactatagatgc---agcctcattatacagatggggaaacagagccccggagagaggtctggccaggctgaggcccacagtaagttcgtgataaggtaggaccagagcctgggtctcaggctcatggtgctctctgtgaccccactaggtcaATCCTCTATACCCTACTTTAAGGGAAACAGGGTGGGGCTGTGCTCCCTGCCGCTCGTCCTGACCCTGTGAATGTGTGGCCTGAGAGCAGGACATGTGCACCAGAAGAGGTGATCCGGAGCTTGTGGTCCACTCTGAGCCTGTGTCCCCCA-ACCTGCAGGC---AGGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 18038 1239 - 21531802 actgcagGCCTAAGTGCTCTTTATAACCCCCAAGTGCAGCAGCGGGGAGGAGACTCTGGTAATGCAC--AGTTTGCTGGTGGCAGGACGGAGCCAGGAGCTC--TGTGTGTCAGTAAGATGTTGGGGTGACAGTCACT-GGGGGCAAAGCCATCACAGAGGcactgacatgagctgtgtgcactgggcagtctctccacctccatgggcctc-aggatcctctcaggtgtgagggtcggTGGTCACCGTGGCCTTCTGCCACATTCATTGGAATGCTACATGTCCAGAATATGCTATTTCCTGGGTGGGATAAAGGGAAGGAAATATGCTTTGTGCGTATTTCACACGGAAGACAATAGTGATAATGCTTCAGTTAGTGCATTGGAGACGCCAGGTTGATTGTAAATGAAATTGTGCTGGGATCTCAGCTCTGCACCATAATTGCACTACGTCTTTTGAATGGAAATCACTTTATCAAAGTCGTGATTTAGCGAGGAGAGATTGCTAATGTTTTTTGCAATGGAGTCTGTGGCTTTATCA---CTTCATAGATTTCATTACAAATGCATGTCAGCTGACCTGTCAAGTCATAAGGCCACAGTCACTCACCTGGCTGGTGTAGGGGAGTGT-AGTTCTAACACTGCCGTCCCTGAGGTAAGGAGAAAGAGAAACCAGGAAAAGTTGCTTCTCTGTGAACAGCATGGC-TGTGTCCAGGTTGCTGACCCCAAGGACGGTGGTTCCAGCGGACACAGTGAGCCAGGCTATTGGGTTGCACAGCACACACTGTGATAATGGGA-GTTTCTTCCTCCTAGGACTCAATGGGCCCAGGGCCCTCTGGAAGGACTCTCTGGACGCTGTCCTTCTGCTCTGTTGAGGGATA--------------------------------------CAGAGTTGGCGAACCACCCCCCatccctctaatccttactcaatttccacccaacactatagatgc---agcctcattatacagatggggaaacagagacccggagagaggtctggccaggctgaggcccacagtaagttcgtgataaggtaggaccggagcctgggtctcaggctcatggtgctctctgtgACCCCACTAGGTCAATTCTCTGTACCCTACTTTAAGGGAAACAGGGTGGGGCTGTGCTCCCTGCCGCTCGGCCTGACCCTGTGAATGTGTGGCCTGAGAGCAGGACATGTGCACCAGAAGAGGTGATCCGGAGCTCGTGGTCCACTCTGAGCCTGTGTCCCCCA-CCCCGCAGGC---AGGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 34440 1241 - 2515279 actgcaggcCTAAGTGCTCTTTATAACCCCCAAGTGCAGCAGCGGGGAGGAGACTCTGGTAATGCGC--AGTTTGCTGGTGACAGGACGGAGCCAGGAGCTCTGTGTGTGTCAGTAAGATGTTGGGGTGACAGTCACC-GGGGGCAAAGCCATCACAGAGGcactgacatgagctgtgtgcactgggcagtctctccacctccatgggcctc-aggatcctctcaggtgtgagggtcggTGGTCCCCGTGGCCTTCTGCCACATTCATTGGAATGCTACATGTCCAGAATATGCTATTTCCTGGGTTGGATAAAGGGAAGGAAATATACTTTGTGCGTATTTCACATGGAAGACAATAGCGATAATGCTTCAGTTAGTGCATTGGAGACGCCAGGTTGATTGTAAATGAAATTGTGCTGGGATCTCAGCTCTGCACCATAATTGCACTACGTCTTTTGAATGGAAATCACTTTATCAAAGTTGTGATTTCGTGAGGAGAGATTGCTAATGTTGTTTGCAATGGAGTCTGTGGCTTTATTA---CTTCACAGATTTCGTTACAAATGCATGCCAGCTGACCTGTCAAGTCATAAGGCCGCAGTCACTCACCTGGCTGGTGTAGGGGATTGT-AGTTCTAACACTGCTGTCCCTGAGGTAAGGAGACAGGGAAACCAGGAAAAGTTGCTTCTCTGTGAACAGCATGGC-TGTGTCCAGGTTGCTGACCCCAAGGATGGTGGTTCCAGCGGACACAGTGAGCCAGGCTGTTGGGTTGCACAGCACGCACCATGATAATGGGA-GTTTCTTCCTCCTAGGACTCAATGGGCCCAGGGCCCTCTGGAAGGACTCTCTGGATGCTGTCTTTCTGCTCTGTTGAGGGATA--------------------------------------TGGAGTTGGTGAACCACCCCCTATCCCTCTAGTCCTTACTCAATTTCCATCCGACACTATAGATGT---AGcctcattatacagatggggaaacagagccccggagagaggtctggccaggctgaggcccacagtaagttcgtgataaggtaggaccagagcctgggtctcaggctcatggtgctctctgtgaccccactAGGTCAATCCTCTATACCCTACTTTAAGGGAAACAGGGTGGGGCTGTGCTCCCTGCCGCTCGGCCTGACCCTGTGAATGTGTGGCCTGAGAGCAGGACATGTGCACCAGAAGAGGTGATCCGGAGCTTGTGGTCCACTCTGAGCCTGTGTCCCCCA-ACCTGCAGGC---AGGGC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146547622 1243 - 204313951 actacagGCCTAAGTGCTTCTTATAAACCCCAAGTGTGGCAGGTGGAAGGAGATTCTGCTTATGCATGGAGTTTGCTGGTGAGAGGACAGAGCCAGGAACTCTGTGTATGTCAGTAAAATGTTGGTGTGACAGTCACC-GGGGGGAAAGCCATCACAGAGgcactgccatgagctgtgtgcattgggcagtctctccacctccatgggcctcaagtattctcTCAGGTATGAGGGTCAGTGGTCTCTGTGGCCTACTGCCACATTCACTGAAATGCTACGTGTCCAGAATATGCTATTTATT-GGGGAAATAAAGAGAAAGAAATATACTTTGTGCATATTTTATATGGAAGACAATAGTGATAATGCTTCAGTTGGTGTGTTGGAGATGCCAGGTGGATTGTAAATGAAATTGTGCTGGAATTGGAGCTCTGC-CCATAATTGTACTAAGTCTTCTGAATAGAAATTAGTTTATCAAATTTGTGATTTATGGAAGAGAGATTGCTAATGTTTTTTGCAATGGATTCCGTTCTTTTATCA---CTTCATATATTTTGTTACAATTGCATGCCAGGTGACTTTTCAAGTCATAAAGCCACAGTAACTCACCTGGCTGGTGTAGAGGAGTATAAATTCTAACACTCCCATCCCTGTGGTAAGGGGAAAGGAAAACACTGAAAGGTTGCTTCTCTGTGAACAGAGTGGCATATGTCCAGATGGCTGACCCCAAGGACGTTGGTTCCCGTGGACACAGTGAGCCAGGCTATGGTGTTGCACAGCATGACCAGAGGTGATAGGAGGTTCCTTCCTCATAGGACTCAAGGGGCCCAGTGCCCTCTGGAAGGACTCTCCAGAAGCTGTCCTTCTGCTTTGTTGAGGGGTG--------------------------------------CAGAGTTGGTGAATCAC-CCCAATCCCACTAGTCCTTACTCAATTTCCATCCAACACTATAGATGG---GAccttattgtacagatggggaaacaaaggccctgagagaggtctggccaggctgaggcccacagcgagttcatgataaggtaggaccatagccagggtctcaggcccatggtgctctctgtgactccactaggtcaatcctctgtaccctgcTTTAAGGGAAACAGGGTGGGGCCACTCTCCCTCC-ACTCATTCTGACCCCGTGGATGTGTGGCCTGAGAACAGGACACATGCACCAGGAGAGGTGATCCTGAGCCTGTGGTCCACTCTGAGCCCATGTCCCCCA-CCCCACAAGC---AGGCC i calJac3.chr2 C 0 I 3114 s cebCap1.NW_016107703v1 396541 1243 - 2125214 actgcaggcctgaaTGCTCTTTATAAACCCCAAGTGCGGCAGGTGGAAGGAGACTCTGGTTATGCACGGAAGTTGCTGGTGGAAGGACAGAGCCAGGAACTCTGTGTGTGTCAGTAAAATGTTGGGGTGACAGTCACCTGGGGGGAAAGCCATCACAGAGgcactgccatgagctgtgtgcattgggcagtctctccacctccatgggcctcaagtattctcTCAGGTGTGAGGGTCAGTGGTCTTTGTGGCCTACTGCCACATTCACTGAAATGCTACGTGTCCAGAATATGCTATTTATT-GGGGGAATAAAGAGAAAG-AATGTACTTCTCACATATTTCATATGGCAGACAATAGTGATAGTGCTTCAGTTGGTGTGTTGGAGATGCCAGGTTGATTGTAAATGAAATTGTGCTGGGATCGGAGCTCTGC-CCATAATTGCACTAAGTCTTCTGAATAGAAATTAGTTTATCAAAGCTGTGATTTATGGAGGAGAGATTGCTAATGGTTTTTGCAATGGATTCTGTTCTTTTATCA---CTTCAGAGATTTTGTTACAAATGCATGACAGGTGACTTTTCAAGTCATAAAGCTGCAGTAACTCACCTGGCTGGTGTAGAGGAGTGTAAATTCTAACACTCCCATCCCTGTGGTAAGGGGAAAGGAAAACACTGAAACGTTGCTTCTCTGTGAACAGAGTAGCATGTGTCCAGATGGCTGGCCCCAAGGATGTTGGTTCCCGTGGACACAGTGAGCCAGGCTGTGGCGTTGCACAGCATGATCAGTGGTGATAGGAGGTTCCTTCCTCACAGGACTCAAGGGGCCCAGTGGCCCTCTGAAGGACTCTCTGGAAGCTGTCCTTCTGCTCTGCTGAGGGGTA--------------------------------------CAGAGTTGGTGAATCACTCCCAATCCCACTAGTCCTTACTCAATTTCCATCCAATGCTATAGATGG---GAccttattgtacagatggagaaacaaaggccctgggagaggtctggccaggctgaggctcac-gtgagttcgtgataaggtaggaccacagccagggtcacaggcccatggtgctctctgtgattctactaggtcaatcctctgtaccctgATTTAAGGGAAACAGGGTGGGGCCACTCTCCCTGT-ACTCACTCTGACCCTGTGGATGTGTGTCCTGAGAGCAGGACACATGTACCAGGAGAGGTGATCCTGAGCCTGTGGTCCACTCTGAGCCCATGTCCCCCG-CCCCTCAGGC---AGGCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2101731 1115 - 8137123 CCTGCGGACCTAAGTGCTCTTTATAAACCATGAGTATGGTGGGAGGGAGGGGACTCTGGT----CAC--------CTG---------------------------------------------GGGGTGACTGCCACA---CAGAAAAGCCATCATAGAGGCACCAAAACAAGC-------------------CTCCACCTCCAC-AGCCTC-AGTGTCTTCCTGGGAATGAGGGTTTGTGGTC-CTGTAGCCTGCTA--AAATCTGATGGAATGTTAC----CCACAGTAGGCTATTCATT-TGCAGAATAAATAAAAAGAAATATGCTTTGTGCATATTTTATACAGAAGACAATAGCAATAATGCTTCAATTAGTGTGTTGGAGATGCCAGGTTGATTGTAAATGAAATGGAGCTGGGATCCAAGCTCTGCACCATAATTGCACTAAGTCTTCTGAATAGAAATTACTTTATCAAAGTTGTGATTTAGAGAAAAGAAGTCGCTAATGTTTTCTGGAATGGAGAAGGTTGCTTTGTCACCTCTTCATAGATTT-GTTGCAAATGTATGCCAGGTGACCTGCCAGATCATAACATGGCA-TGACTCACTTCCCTGGTGAGGGAGAGTGT-GATTCTAAAGTTGCCTTCC--GTGGT---------------CCTGACAGGGTCACTTATCTCTGAACAGGATGAC-TGGGTCCAGATGGCTGACCCTGAG------GGCTCCAGCAG---CAGTGTGCCAGGCTAT-------------ATATGCAGTGGTGACAGTA-GGTTCCTACCTCAGGGACTCAAGGGTCCCTTGCCCCTATGGAAGGAC-CCATGGCAGCTTTCCTTTTGCTCTGTCCAGAGCTGCTTTCTGGACAGTGTCATTGAAGGACCTATCGTTGGGTCAAAGCTGGTGAATCAC-CACTGTCCCTCTGACCCCTTATCCATTTCCACCAAACACAAGAGATGTGAAGGGctcattgtacagatggggaaactgaggtcctgagaggagaagggatgtgctgaggccctccgagagt------taagtta-------agcctggatctctgg----------tctctg-----------------ttctctg-accctgcttt-AGGGGCATAGGTTGGGGCCA-ACTTAACTCAGCACAGACTGACCCTGTGGATGTACAGCCTGAAAGCAGGGCATGTGAGGCCGAGGAGGTGATCCTGATCCCCTAGTCCCCTCTGGGTCAGTGTCCCCCAGCCCTGTGTGC---AGGGC i otoGar3.GL873611 I 1026 C 0 e canFam3.chr6 60958126 1313 - 77573801 I a score=7800.000000 s hg38.chr7_KI270899v1_alt 47262 1 + 190869 C s gorGor5.CYUI01015914v1 7853 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 71229 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33912279 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33528246 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4289589 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16879238 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 19277 1 - 21531802 C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 35681 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146551979 1 - 204313951 C i calJac3.chr2 I 3114 C 0 s cebCap1.NW_016107703v1 397784 1 - 2125214 C i cebCap1.NW_016107703v1 C 0 I 2843 s otoGar3.GL873611 2102846 1 - 8137123 C i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60959439 1 - 77573801 C i canFam3.chr6 I 1313 C 0 a score=38958.000000 s hg38.chr7_KI270899v1_alt 47263 6 + 190869 ACTGCT s gorGor5.CYUI01015914v1 7854 6 - 432965 ACTGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 71230 6 + 85365473 ACTGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33912280 6 + 185818997 ACTGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33528247 6 + 192294377 ACTGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4289590 6 - 9440265 ACTGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16879239 6 - 21915920 ACTGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 19278 6 - 21531802 ACCACT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 35682 6 - 2515279 ACTGCT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146551980 6 - 204313951 ACTGCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 400628 6 - 2125214 ACTGCT i cebCap1.NW_016107703v1 I 2843 C 0 s otoGar3.GL873611 2102847 6 - 8137123 AGTGCT i otoGar3.GL873611 C 0 I 5175 s canFam3.chr6 60959440 6 - 77573801 ACTGCT i canFam3.chr6 C 0 C 0 a score=73868.000000 s hg38.chr7_KI270899v1_alt 47269 17 + 190869 TCCAGATTAAAGGAAAG s gorGor5.CYUI01015914v1 7860 17 - 432965 TCCACATTAAAGGAAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 71236 17 + 85365473 TCCTGATTAAAGGAAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33912286 17 + 185818997 TCCTGATTAAAGGAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33528253 17 + 192294377 TCCTGATTAAAGGAAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4289596 17 - 9440265 TCCTGATTAAAGGAAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16879245 17 - 21915920 TCCTGATTAAAGGAAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 19284 17 - 21531802 TCTTGATTAAAGGAAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 35688 17 - 2515279 TCCTGATTAAAGGAAAG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146551986 17 - 204313951 TCCTGATGAACGGGAAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 400634 17 - 2125214 TCTTGATGAAGGGGAAG i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60959446 16 - 77573801 CCCTGATGAAACGAAG- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2102853 5175 - 8137123 I a score=52414.000000 s hg38.chr7_KI270899v1_alt 47286 9 + 190869 GTGAGTTAC s gorGor5.CYUI01015914v1 7877 9 - 432965 GTGAGTTAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 71253 9 + 85365473 GTGAGTTAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33912303 9 + 185818997 GTAAGTTAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33528270 9 + 192294377 GTAAGTTAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4289613 9 - 9440265 GTAAGTTAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16879262 9 - 21915920 GTAAGTTAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 19301 9 - 21531802 GTAAGTTAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 35705 9 - 2515279 GTAAGTTAT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146552003 9 - 204313951 GTGAGTTAC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 400651 9 - 2125214 GTGAGTCAC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2108028 9 - 8137123 GTGGGCTGC i otoGar3.GL873611 I 5175 C 0 s canFam3.chr6 60959462 9 - 77573801 GTGGGTTAC i canFam3.chr6 C 0 C 0 a score=739558.000000 s hg38.chr7_KI270899v1_alt 47295 116 + 190869 TTAGCGCTCATTAACTCA-CGAAGTCAGAGGTAATCAAGAC--CAGATTGAACTTCCGTCCAATCGACTT-AGGCACTCTCATGTTTAAAAATCCATATGGGGAAAATAATGCAAGAACG s gorGor5.CYUI01015914v1 7886 116 - 432965 TTAGCACTCATTAACTCA-CGAAGTCAAAGGTAATCAAGAC--CAGATTGAACTTCCATCCAATCGACTT-AAACACTCTCATGTTTAAAAATCCATATAGGAAAAATAATGCAAGAACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 71262 116 + 85365473 TTAGCACTCATTAACTCA-TGAAGTCAAAGGTAATCAAGAC--CGGATTGAACTTCCATCCAATTGACTT-AAACACTCTCATGTTTAAAAATTCGTATGGGAAAAATAATGCAAGAACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33912312 115 + 185818997 TTAGCACTCATTAATTCA-TGAAGTCAAAGGTAATCACGAC--CAGGTTGAACTTCCATCCAATCGACTC-AAACACTCTCATGTTTAAAAATCCACAT-GGAAAAATAATGCAAGAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33528279 115 + 192294377 TTAGCACTCATTAATTCA-TGAAGTCAAAGGTAATCACGAC--CAGGTTGAACTTCCATCCAATCGACTC-AAACACTCTCATGTTTAAAAATCCACAT-GGAAAAATAATGCAAGAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4289622 115 - 9440265 TTAGCACTCATTAATTCA-TGAAGTCAAAGGTAATCACGAC--CAGGTTGAACTTCCATCCAATCGACTC-AAACACTCTCATGTTTAAAAATCCACAT-GGAAAAATAATGCAAGAACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16879271 115 - 21915920 TTAGCACTTATTAATTCA-TGAGGTCAAAGGTAATCACGAC--CAGGTTGAACTTCCATCCAATCGACTT-AAACACTCTCATGTTTAAAAATCCACAT-GGAAAAATAATGCAAGAACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 19310 115 - 21531802 TTAGCACTCATTAATTCA-TGAAGTCAAAGGTAATCACGAC--CAGGTTGAACTTCCATCCAATCGACTT-AAACACTCCCATGTTTAAAAATCCATAT-GGAAAAATAATGCAAGAACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 35714 115 - 2515279 TTAGCACTTATTAATTCA-TGAGGTCAAAGGTAATCACGAC--CAGGTTGAACTTCCATCCAATCGACTT-AAACACTCTCATGTTTAAAAATCCATAT-GGAAAAATAATGCAAGAACA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146552012 113 - 204313951 TTAACACTCATTAACTTA-TGAAGTCAAAGGTATTCAAGAC--CAGATTGAACTTCTATCCAATTGACTT-AAACACTCTAAGGCTTAAAAATCCATATGGGCAAAATAATGC---AACA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 400660 117 - 2125214 TTAACACTCATTAACTCA-TGAAGTCAAAGGTATTCAAGAC--CAGATTGAACTTCTATCCAATCGACTTAAAACACTCTCAGGCTTAAAAATCCATATGGGAAAAATAATACAAGAACA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 21428 116 + 376347 TTAACGCTCATTAACTCA-TGAAGTCAAAGGTATTCAAGAC--CAGACTGAACTTCTATCCGATCGACTT-AAATACTCTCAAGCTTAAAAATCCATATGGGAAAAATAATGCCGGAACA i aotNan1.NW_018514293v1 N 0 C 0 s otoGar3.GL873611 2108037 117 - 8137123 ATAACACCCATTAACTCGTTGAAGTCAAAGGTAATCAAGAC--CAAATTGAATCTCTATCCAATTAATGT-AAACACCTTTGTGTTTAAAAATCCATATAGAAAAAGGAATAGAAATATA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60959471 118 - 77573801 TTAACTCACATTAACTCACTGAAGTCAAAGGTACTTAAGGCTTTGGATTAAA-TCATATCCAATTGATGT-AAACACCCTCATGTTTAAAAATTCATATGGGAAAAATAACGTAAGTGTA i canFam3.chr6 C 0 C 0 a score=60743.000000 s hg38.chr7_KI270899v1_alt 47411 9 + 190869 TAA--------------TTTTTT s gorGor5.CYUI01015914v1 8002 9 - 432965 TAA--------------TTTTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 71378 23 + 85365473 TAATTTTTAAAAAAAATTTTTTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33912427 9 + 185818997 TAA--------------TTTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33528394 9 + 192294377 TAA--------------TTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4289737 9 - 9440265 TAA--------------TTTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16879386 9 - 21915920 TAA--------------TTTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 19425 9 - 21531802 TAA--------------TTTTTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 35829 9 - 2515279 TAA--------------TTTTTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 198626 9 + 6586416 TAA--------------TTTTTT i colAng1.NW_012117710v1 N 0 C 0 s calJac3.chr2 146552125 9 - 204313951 TAA--------------TTTTTC i calJac3.chr2 C 0 I 11710 s cebCap1.NW_016107703v1 400777 9 - 2125214 TAA--------------TTTTTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 21544 9 + 376347 TAA--------------TTTTTA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108154 9 - 8137123 TCA--------------TTTTTC i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 60959589 9 - 77573801 TTA--------------TTTTTT i canFam3.chr6 C 0 I 3 a score=121097.000000 s hg38.chr7_KI270899v1_alt 47420 16 + 190869 AAAAAGAATGTGGAAA s gorGor5.CYUI01015914v1 8011 16 - 432965 AAAAAGAATGTGGAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 71401 16 + 85365473 AAAAAGAATGTGCAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33912436 16 + 185818997 AAAAAGAAAGTGCAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33528403 16 + 192294377 AAAAAGAATGTGCAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4289746 16 - 9440265 AAAAAGAATGTGCAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16879395 16 - 21915920 AAAAAGAATGTGCAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 19434 16 - 21531802 AAAAAGAATGTGCAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 35838 16 - 2515279 AAAAAGAATGTGCAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 198635 16 + 6586416 AAAAAGAATGTGCAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146563844 16 - 204313951 aAAAAGAATGCACAAA i calJac3.chr2 I 11710 C 0 s cebCap1.NW_016107703v1 400786 16 - 2125214 AAAAAGAATGCACAAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 21553 16 + 376347 AAAAAGAATGCACAAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108164 16 - 8137123 CAAGAGAATGTACATA i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 60959601 16 - 77573801 AAAAAGAATGAAggga i canFam3.chr6 I 3 I 226 a score=416102.000000 s hg38.chr7_KI270899v1_alt 47436 75 + 190869 AGTGGTGTAAAACTGTTAATTGTTCTTA--ATGTGAGCTGCAACTTTGGCCTCACTGTGGCTGCT--CCGTGACGGATA s gorGor5.CYUI01015914v1 8027 75 - 432965 AGTGGTGTAAAACTGCTAATTGTTCTTA--ATGTGAGCTGCAACTTTGGCCTCACAGTGGCTGCT--CCGTGACGGATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 71417 75 + 85365473 AGTGGTGTAAAACTGCTAATTGTTCTTG--ATGCGAGCTGCAACTTCAGCCTCACTGTGGCTGCT--CCCTGACGGATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33912452 73 + 185818997 CGTGGTCTAAAAC--TGAATTGTTCTTA--ATGTGAGCTGCGACTTCGGCCTCACTGTGGCTGCT--CCCTGACCGACG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33528419 75 + 192294377 CGTGGTCTAAAACTGTGAATTGTTCTTA--ATGTGAGCTGCGACTTCGGCCTCACTGTGGCTGCT--CCCTGACCGACG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4289762 75 - 9440265 CGTGGTCTAAAACTGTGAATTGTTCTTA--ATGTGAGCTGCAACTTCGGCCTCACTGTGGCTGCT--CCCTGACCGACG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16879411 74 - 21915920 CGTGGT-TAAAACTGCAAATTGTTCTTA--ATGTGAGCTGCGACTTCGGCCTCACTGTGGCAGCT--CCCTGACCGACG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 19450 75 - 21531802 CGTGGTCTAAAACTGCAAATTGTTCTTA--ATGTGAGCTGCGACTTCGGCCTCACTGTGGCTGCT--CCCTGACCGACG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 35854 75 - 2515279 CGTGGTCTAAAACTGCAAATTGTTCTTA--ATGTGAGCTGCGACTTCGGCCTCACTGTGGCAGCT--CCCTGACCGACG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 198651 75 + 6586416 CGTGGTCTAAAGCTGCGAATTGTTCTTA--ATGTGAGCTGCAACTTCGGCCTCACTGTGGCTGCT--CCCTGACCGACG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146563860 75 - 204313951 GGTGATATAAACCTGCTAATTGTTCTTA--ATGTGAGGTGTAATTTTGGCCTCACTGTGGCTGAT--CCCTGACAGGTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 400802 77 - 2125214 AGTGGTGTAAACCTGCTAATTGTTCTTA--ATGTGAGGCATAACTTTGGTCTCACAGGGATCAATCACCCTGACAGGTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 21569 75 + 376347 AGTGGTGTAAACCTGCTGATCCTTCTTA--ATGTGAGGCGTAACTTTGGCCTCACTGTGGCTGAC--CCCTGACAGGTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108180 63 - 8137123 AGTGGTATAAAATGGCTTTTTTCCATTAATATGTGAGACGCACCCTTGGCCTTGCTGTGG--AAT-------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60959617 226 - 77573801 I a score=3789323.000000 s hg38.chr7_KI270899v1_alt 47511 566 + 190869 CTGAATGGCG------------GTGGGGCTCCTTGGAGCTTGCTGAG------GGTTCCCGCCT------------------GTATCCACT--------TTCCCTCCAGTCACATTATTTTAAGAAGGGAAACTGCCCCCCATTCCCTG-CCTCCCTGCTTCCTTTGTGGTCCTTGGGAAAAAGAAATTCCACGAAG-AAA-CTAGTCTGTGCTGCTGGGGTAAGGACAGTGTTTTCCCTGGAGGAGGCCACGCTGGAGG--GACCACAG-AGGCACT---GCGGGCAGCTCACACCCTGCTCCAGTGTCCAGGTAATGGCCACA-GGGTGAGCTTGGTTTTTCAAAATCTACTGAGCACTTTTCTGTAAGTACATGATATTTCAATGAAGCATT--ATGAA---ATTATA-TTATCAGAAGCC-AAATTTGGTTTGTTTCCATTGGGTTTTCAAGGTCTATTTTATTCCTATCCTTTCCTTTTTCTTTACATTTTCTCCTCTTCTTTAACTAAAAAAA-------------------------------CCTCTATAAGTTTGAAAGACTCTCAGGTCTTCAGGATAAAATGCGAATTGGTGCTT-TAAGCTTTGTCCCTTCCTGCAGTGGGACTCA----CAGTCCCCTTTCAGAGACCTG s gorGor5.CYUI01015914v1 8102 566 - 432965 CTGAATGGCG------------GTGGGGCTCCTTGGAGCTTGCTGAG------GATTCCCGCCT------------------GTATCCACT--------TTCCCTCCAGTCACATCATTTTAAGAAGGGAAACTGCCCCCCCTTCCCTG-CCTCCCTGCTTCCTTTGTGGTCCTTGGGAAAAAGAAATTCCACGAAG-AAA-CTAGTCTGTGCTGCTGGGGTAAGGACAGTGTTTTCCCTGGAGGAGGCCACGCTGGAGG--GACCACAG-AAGCACT---GCGGGCAGCTCACATCCTGCTCCAGTGTCCAGGTAATGGCCACA-GGGTGAGCTTGGTTTTTCAAAATCTACTGAGCACTTTTCTGTAAGTACATGATATTTCAATGAAGCATT--ATGAA---ATTATA-TTATCAGAAGCC-AAATCTGGTTTGTTTCCATTGGGTTTTCAAGGACTATTTTATTCCTATCCTTTCCTTTTTCTTTACATTTTCTCCTCTTCTTTAACTAAAAAAA-------------------------------CCTCTATAAATTTGAAAGACTCTCAGGTCTTCAGGATAAAATGGGAATTGGTGCTT-TAAGCTTTGTCCCTTCCTGCAGTGGGACTCA----CAGTCCCCTTTCAGAGACCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 71492 562 + 85365473 CTGAATGGCG------------GTGGGGCT--TTGGAGCTCGCTGAG------GGTTCCCGCCT------------------GTATCTGCT--------TTCCCTCCAGTCACATCATTTTAAGAAGGGAAACTGCCCCCCATTCCCTG-CCTCCCTGCTTCCTTTGTGGTCCTTGGAAAAAAAAAATTCCACGAAG-aaa-ctagtctgtgctgccggggtaaggacagtgttttccctggaggaggccacactggagg--gaccacag-aggcact---gaggtcagctcacaccctgctccagtgtctgggtaatggccaca-gggtgagcttgg-gtttcgaaatctactgagcACTTTGCTGTAAGTGCCTGATACTTCAATGACGCG-T--ATGAA---ATTATA-TTATCAGAAGCC-AAACTTGGTTTGTTTCCATTGGGTTTTGAAGGTCTATTTTATTCCTATCCCTTCCTTTTTCTTGACATTTTCTCCTCTTCTTTAACTAAAAAAA-------------------------------CCTCTACGTGTTTGAAAGACTCTCAGGTCTTCAGGATAAAATGGGAATTGATGCTT-TAAGCTTTGTCCCTTCCTGCAGTGGGGTTCA----CAGTCCCCTTTCAGAGAACTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33912525 565 + 185818997 CTGAACGGCG------------GTGCGGCTCCCCGGCGCTCACTGAG------GTTTCCTGCCT------------------GTATCCCCT--------TTCCCTCCAGTCACGTCATTTTAGGAAGGGAAACTGCCCCCCATTCTCTG-CCTCCCTGCTTCCTTTGTGGTCCTCGGAAAAAAGAAATTCCACAGAG-AAA-CCAGTCCGTGCTGCTGAGATAAGGACAGAGTTTTCCCTGGAGGAGGCCACACTGGAGG--GACCACGG-AGGCACT---GGGGGCGGCGCACACCCTGCTTCAGTGTCCGGGTAACGGCCGCA-GGGCGAGCTTGGGTTTTCCAAATCTGCCGAGCACTTT-CTGTAAGTACATGACACTTCAATGAAGCATT--ATGAA---ATTATA-CTATCAGAAGCC-AAATTTAGTTTGTTTCCATTGGGTTTTCAAGGTCTATTTTATTCCTATCCTTTCCTTTTTCTTGACATTTTCTCCTCTTCTTTAACTCAAAAAA-------------------------------CCTCTGTATGTTTGAAGGACTCTTAGGTCTCCAGGATAAAATGGGAATTGGTGCTT-TGAGCTTTGTCCCTTCCTGCAGTAGGGCTCA----CGGTCCCCTTTCAGAGACCCG i rheMac8.chr3 C 0 I 478 s macFas5.chr3 33528494 565 + 192294377 CTGAACGGCG------------GTGCGGCTCCCCGGCGCTCACTGAG------GTTTCCTGCCT------------------GTATCCCCT--------TTCCCTCCAGTCACGTCATTTTAGGAAGGGAAACTGCCCCCCATTCTCTG-CCTCCCTGCTTCCTTTGTGGTCCTCGGAAAAAAGAAATTCCACAAAG-AAA-CCAGTCCGTGCTGCTGAGATAAGGACAGAGTTTTCCCTGGAGGAGGCCACACTGGAGG--GACCACGG-AGGCACT---GGGGGCGGCGCACACCCTGCTTCAGTGTCCGGGTAACGGCCGCA-GGGCGAGCTTGGGTTTTCCAAATCTGCCGAGCACTTT-CTGTAAGTACATGACACTTCAATGAAGCATT--ATGAA---ATTATA-CTATCAGAAGCC-AAATTTAGTTTGTTTCCATTGGGTTTTCAAGGTCTATTTTATTCCTATCCTTTCCTTTTTCTTGACATTTTCTCCTCTTCTTTAACTCAAAAAA-------------------------------CCTCTGTATGTTTGAAGGACTCTTAGGTCTCCAGGATAAAATGGGAATTGGTGCTT-TGAGCTTTGTCCCTTCCTGCAGTGGGGCTCA----CGGTCCCCTTTCAGAGACCCG i macFas5.chr3 C 0 I 478 s macNem1.NW_012019910v1 4289837 569 - 9440265 CTGAACGGCG------------ATGCGGCTCCCCGGCGCTCGCTGAG------GTTTCCTGCCT------------------GTATCCCCT--------TTCCCTCCAGTCACGTCATTTTAGGAAGGGAAACTGCCCCCCATTCTCTG-CCTCCCTGCTTCCTTTGTGGTCCTTGGAAAAAAGAAATTCCACAAAG-AAA-CCAGTCCGTGCTGCTGAGATAAGGACAGAGTTTTCCCTGGAGGAGGCCACACTGGAGG--GACCACGG-AGGCACT---GGGGGCGGCGCACACCCTGCTTCAGTGTGCGGGTAACGGCCGCA-GGGCGAGCTTGGGTTTTCCAAATCTGCCGAGCACTTT-CTGTAAGTACATGACACTTCAATGAAGCATT--ATGAA---ATTATA-CTATCAGAAGCC-AAATTTAGTTTGTTTCCATTGGGTTTTCAAGGTCTATTTTATTCCTATCCTTTCCTTTTTCTTGACATTTTCTCCTCTTCTTTAACTCAAAAAA-------------------------------CCTCTGTATGTTTGAAGGACTCTTAGGTCTCCAGGATAAAATGGGAATTGGTGCTT-TGAGCTTTGTCCCTTCCTGCAGTGGGGCTCACGGTCGGTCCCCTTTCAGAGACCCG i macNem1.NW_012019910v1 C 0 I 478 s cerAty1.NW_012002954v1 16879485 568 - 21915920 CTGAACGGCG------------GTGCGGCTCCCCGGCGCTCGCTGAG------GTTTCCTGCCT------------------GTATCCCCT--------TTCCCTCCAGTCACGTCATTTTAGGAAGGGAAACTGCCCCCCATTCCCTG-CCTCCCTGCTTCCTTTGTGGTCCTCGGAAAAAAGAAATTCCACAAAG-AAA-CCAGTCCGTGCTGCTGAGATAAGGACAGAGTTTTCCCTGGAGGAGGCCACACTGGAGG--GACAACGG-AGGCACT---GGGGGAGGCGCACACCCTGCTTCAGTGTCCGGGTAACAGCCGCA-GGGCGAGCGTGGGTTTTCCAAATCTGCTGAGCACTTT-CTGTAAGTACATGACACTTCAATGAAGCATT--ATGAAATTATTATA-CTATCAGAAGCC-AAATTTAGTTTGTTTCCATTGGGTTTTCAAGGTCTATTTTATTCCTATCCTTTCCTTTTTCTTGACATTTTCTCCTCTTGTTTAACTCAAAAAA-------------------------------CCTCTGTATGTTTGAAGGACTCTTAGGTCTCCAGTATAAAATGGGAATTGGTGCTT-TGAGCTTTGTCCCTTCCTGCAGTGGGGCTCA----TGGTCCCCTTTCAGAGACCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 19525 565 - 21531802 CTGAACGGCT------------GTGCGGCTCCCCGGCGCTCACTGAG------GGTTCCTGCCT------------------GTAACCCCT--------TTCCCTCCAGTCAAGTCATTTTAAGACGGGAAACTGCCCCCCGTTCCCTG-CCTCCCTGCTTCCTTTGTGGTCCTCGGGAAAAAGAAATTCCACGAAG-AAA-CCAGTCCGTGCTGCTGAGATCAGGACAGAGTTTTCCCTGGAGGAGGCCACACTGGAGG--GACCACGG-AGGCACT---GGGGGCGGCGCACACCCTGCTCCAGTGTCCGGGTAATGGCCGCA-GGGCGAGCTTAGGTTTTCCAAATCTGCTGAGCACTTT-CTGTAAGTACATGACACTTCAATGAAGCATT--ATGAA---ATTATA-CTATCAGAAGCC-AAATTTGGTTTGTTTCCATTGGGTTTTCAAGGTCTATTTTATTCCTATCCTTTCCTTTTTCTTGACATTTTCTCCTCTTCTTTAACTCAAAAAA-------------------------------CCTCTGTATGTTTGAAGGACTCTTAGGTCTCCAGGATAAAATGGGAATTGGTGCTT-TGAGCTTTGTCCCTTCCTGCAGTGGGGCTCA----CGGTCCCCTTTCAGAGACCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 35929 565 - 2515279 CTGAACGGAG------------GTGCGGCTCCTCGGCGCTCGCTGAG------GGTTCCTGCCT------------------GTATCCCCT--------TTCCCTCCAGTCACGTCATTTTAGGAAGGGAAACTGCCCCCCATTCCCTG-CCTCCCTGCTTCCTTTGTGGTCCTCGGGAAAAAGAAATTCCACGAAG-AAA-CCAATCCGTGCTGCTGAGATAAGGACAGAGTTTTCCCTGGAGGAGGCCACACTGGGAG--GACCACAG-AGGCACT---GGGGGCGGCGCACACCCTGCTTCAGTGTCCGGGTAACGGCCGCA-GGGCGAGCTTGGGTTTTCCAAATCTGCTGAGCACTTT-CTGTAAGTACATGACACTGCAATGAAGCATT--ATGAA---ATTATA-CTATCAGAAGCT-AAATTTAGTTTGTTTCCATTGGGTTTTCAAAGTCTATTTTACTCCTATCCTTTCCTTTTTCTTGACATTTTCTCCTCTTCTTTAACTCAAAAAA-------------------------------CCTCTGTATGTTTGAAGGACTCTTAGGTCTCCAGGATAAAATGGGAATTGGTGCTT-TGAACTTTGTCCCTTCCTGCAGTGGGGCTCA----CGGTCCCCTTTCAGAGACCCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 198726 576 + 6586416 CTGAACAGCGCTGGGGCTCCTCGTGGGGCTCCTCGGCGCTCGCTGAG------GGTTCCTGCCT------------------GTAACCCCT--------TTCCCTCCAGTCACGTCATTTTAAGAAGGCAAACTGCCCGCCACTCCCTG-CCTCCCTGCTTCCTTTGTGGTCCTTGGGAAAAAGAAATTCCATGAAG-AAA-CCAGTCCGTGCTGCTGAGATAAGGAC--AGTTTTCCCCGGAGGAGGCCACACTGGAGG--GACCACGG-AGGCACT---GGGGGCGGCGCACACCCGGCTACAGTGTCCGGGTAACGGCCGCA-GGGCGAGCTTGAGTTTTCCAAATCTGCTGAGCACTTT-CTGTAAGTACGTGACACTTCAATGAAGCATT--ATGAA---ATTATA-CTATCAGAAGCCAAAATTTGGTTTGTTTCCATTGGGTTTTCAAGGTCTGTTTTATTCCTATCCTTTCCTTTTTCTTGACATTTTCTCCGCTTCTTTAACTCAAAAAA-------------------------------CGTCTGTATGTTTGAAGGACTCTCAGGTCTCCAGGATGAAATGGGAATTGGTGCTT-TGAGCTTTGTCCCTTCCTGCAGTGGGGCCCA----CGGTCCCCTTCCAGAGACCCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146563935 555 - 204313951 CTGAACAGAG------------GTGGGGCTCTTTGGAGCTTGCTGAA------GGTTCCTGCCT------------------GTATCTGCT--------TTCCCTCCAATCACGTCATTTTAAGAAGG-AAGCTGCCACC----------ATTCCCTGCCTCCTTTGTGGTCCTTGGGAAAAAGCAATTCCACGAAG-aaa-ctaatctgtgctcctgagataaggacaatgttttccctggaggaggccatactggaga--gaccacag-agtcact---ggggacaactcatactctcctctagtgtctgggtactggccaca-gggtgagcttggtttttgaaaatctactgagtacttttctgtaagtacaggatacttcaatgaaGCG----ATGAA---ATTATA-TTATCAGAAGCC-AAGTTTGGTTTGTTTCCAATGGACTTTCAAGATCTATTTTATTCCTAACCTTTCCTTTTTCTTGACATTTTCTCCTCTATTTTAGCAAAAAAAA-----------------------------AATCTCTCTAT-TTTGAAAGACTCTAAGGTCTTCAGGATAAAATGGAAATTGGTGCTT-TAAACCTCGTCCCTTCCTGCGGTGGGACTCA----CAGTCCCCTTTCAGAGACATG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 400879 551 - 2125214 CTGAACGGAG------------GTGGGGCTCTTTGGAGCTTTCTGAG------GGTTCCTGCCT------------------GTATCTGCT--------TTCCCTCCAATCATGTCATTTTAAGAAGA-AAGCTGCCCCC----------ATTCCCTGCCTCCTTTGTGGTCCTTGGGAAAAAGAAATTCCACGAAG-aaa-ctaatctgtgctgctgagataaggacagtgttttccctggaggaggccatactggagg--gaccacag-aggcacc---gggggcagctcacactctcctctagtgtctgggtactggccaca-gggtgggcttggtttttgaaaatctactgagcACTTTTCTGTAAGTACAGGAAACTTCAATGAAGCG----ATTAA---ATTATA-TTATCAGAAGCC-AAATTTGGTTTGTTTCAATTGGATTTTTGAGATCTATTTTATTCCTATCCTTTCCTTTTTCTTGATATTTTCTCCTCTTTTTTGGGAAAAAAAA--------------------------------CTTTCTGT-TTTGAAAGACTCTAAGGTCTTCAGGATAAAATGGGAATTGGTG-TT-TAAACCTCGTCCCTTTCTGCAGTGGGGCTCA----CAGTCCCCTTTCAGAGACGTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 21644 545 + 376347 CTGAATGGAG------------GTGGGGCTCTTTGGAGCTGGCTGAG------GGTTCCTGCCT------------------GTATCTGCT--------TTCCCTCCAATCATGTCATTTTAAGATGG--AGCTGCCCCG----------ATTCCCTGCCTCCTTTGTGGTCCTTGGGAAAAATAAATTCCAAGAAG-AAA-TTAATCTGTGCTGC-----TAAGGACGGTGTTTTCCCTGGAGGAGGCCGTACTGGAGG--GACCACAG-AGGCACT---GGGG-CAGCTCACACTCTCCTCTCATGTCTGGGCACTGGCCACA-GGGCGAGCTTGGTTTTTGAAAATCTACTGAACACTTTTCTGTAAGTACAGGACACTTCAATGAAGTG----ATGAA---ATTATG-TTATCAGAAGCC-AAATT--------------TGTATTTTCAAGATCTATTTTATTCCTATCCTTTCCTTTTTCTTGACATTTTCTCCTCTATTTTAGCaaaaaaaaaaaaaaaaaa------------------aaaaCTCTCTAT-TTTGAAAGACTCTAAGGTCTTCAGGATAAAATGGGAATTGGTGCTT-TAAACCTCATCCCTTCCTGCAGTAGGGCTCA----CAGTCCCCTTTCAGAGACGTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108243 551 - 8137123 ---------G------------CAGGGTCTCCTTGGAGCT-GCTGAA------GGCTGGTGCCT------------------GTGTCC----------------------CAGGCCACTTTCCAGAGGGAAGCTTCCCTC-ATTCCTTG-CCCCTTTGCTTCCTTTTTGGTC-----------------CCACAGGGAAAA-CAAATCTGTGCTGCCAGGGT--GGGCGTAGGTTTCCCCAGGGGAG---ATGCTGCAGGAAGACCACAG-AGGCACT---GGGGGCAGCTTGTGCCATGTTCTGGGGCCTCAGTGCTGGC--CA-GAGTGTGCTTGGCTTGTGAAGACCCACTGAGCACTTTGCTGCAAGTACACAGTACTTCAGTGGAAAGTTCAGGGAA---ATGATG-TCAGCAGAAGCT-AAGTCTGGCTTGTTCCCACTGGGTTGCCGAGGTCTACTTTATTCCTACCCTTTCCTTCCCCTGGATATTTCCTCCTCTTCTCTAACTGGAAAATAAAAAGAAAGCAAGCAAAAGAAAGAAGCAAACTTCTTTGTGTTTGGAAGACTCTCAGGTTTTCAGGATAAAATGGGAATTTGAGCTT-TAAGCTTTG-CTCCTCCTGCAGTGGGCTGCA----CAG-CCCCTGTCTGAGATGAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60959843 607 - 77573801 CTGTACAGTG-----------TGAAGGGCAGCTCCGGTCTTGCTGTAGACTGTGGTTCCTCACTGGCCAGGGCTTGGGCGAGGTCTCCTCTATTTCTTATTCTCTCCAACCAGGGTGTTTTAGATAGGGAAACTGCCCCC-ATTCCCTGCCCTCTCTGCTTCCTTTCTGGTCGTTGAGTAAAAGAAGTCCCacaaag-aaagctcatctgtgctgctggacatggggtgctaggttccccggaagaggcagtgcctggga--ggccatagcaggggcttcagggagcaggacatgtcctatttctgtatctgggcactggtcacacaggggtgctcagtttgggaaaatccactcagccgtttcctatgagtatatgatgcctcagggaaaggtttaaagaa---aTTATATTTACCATAAGCC-AAATATGATTGGTTTCCATTGGGTTTTTGGGGTCTATTTTATTCCTATGCTTCTCTTTTCCTTCATATTTCCTCTATTTCATAACTGAGAAAAA-------------------------------CTCCCCTGCGTTTGGA-GAGTTTCAGGTTTTTAGGATACAATGGGAATTTGCACTTCTGAACTTTGTCCCTTCCTGTGGTAATCTGCA-----GATCCCCTTTCAGACATGTG i canFam3.chr6 I 226 C 0 a score=32737.000000 s hg38.chr7_KI270899v1_alt 48077 4 + 190869 CTTG s gorGor5.CYUI01015914v1 8668 4 - 432965 CTTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72054 4 + 85365473 CTTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33913568 4 + 185818997 ctta i rheMac8.chr3 I 478 C 0 s macFas5.chr3 33529537 4 + 192294377 ctta i macFas5.chr3 I 478 C 0 s macNem1.NW_012019910v1 4290884 4 - 9440265 ctta i macNem1.NW_012019910v1 I 478 C 0 s cerAty1.NW_012002954v1 16880053 4 - 21915920 CTTG i cerAty1.NW_012002954v1 C 0 I 478 s chlSab2.chr28 20090 4 - 21531802 CTTG i chlSab2.chr28 C 0 I 477 s manLeu1.NW_012101810v1 36494 4 - 2515279 CTTG i manLeu1.NW_012101810v1 C 0 I 477 s colAng1.NW_012117710v1 199302 4 + 6586416 CTTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146564490 4 - 204313951 CTTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 401430 4 - 2125214 CTTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 22189 4 + 376347 CTTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108794 4 - 8137123 CTTT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60960450 4 - 77573801 CTTG i canFam3.chr6 C 0 C 0 a score=10555.000000 s hg38.chr7_KI270899v1_alt 48081 2 + 190869 GT- s gorGor5.CYUI01015914v1 8672 2 - 432965 GT- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72058 2 + 85365473 GT- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33913572 2 + 185818997 GT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33529541 2 + 192294377 GT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4290888 2 - 9440265 GT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16880535 2 - 21915920 GT- i cerAty1.NW_012002954v1 I 478 C 0 s chlSab2.chr28 20571 2 - 21531802 GT- i chlSab2.chr28 I 477 C 0 s manLeu1.NW_012101810v1 36975 2 - 2515279 GT- i manLeu1.NW_012101810v1 I 477 C 0 s colAng1.NW_012117710v1 199306 2 + 6586416 GT- i colAng1.NW_012117710v1 C 0 I 1137 s calJac3.chr2 146564494 2 - 204313951 GT- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 401434 2 - 2125214 GT- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 22193 2 + 376347 GT- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108798 1 - 8137123 -T- i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 60960454 2 - 77573801 -TT i canFam3.chr6 C 0 C 0 a score=58262.000000 s hg38.chr7_KI270899v1_alt 48083 12 + 190869 CAAGGGTAGTTA s gorGor5.CYUI01015914v1 8674 12 - 432965 CAAGGGTAGTTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72060 12 + 85365473 CAAGGGTAGTTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33913574 12 + 185818997 CGAGGGCAGTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33529543 12 + 192294377 CGAGGGCAGTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4290890 12 - 9440265 CGAGGGCAGTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16880537 12 - 21915920 CGAGGGCAGTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 20573 12 - 21531802 CGAGGGCAGTTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 36977 12 - 2515279 CGAGGGCAGTTC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146564496 12 - 204313951 CTAGGGTAGTTA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 401436 12 - 2125214 CTAGGGTAGTTA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 22195 12 + 376347 CTAGGGTAGTTA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108800 12 - 8137123 CTAGATAAGTTC i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 60960456 12 - 77573801 CCGAAGGGGCCA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 199308 1137 + 6586416 I a score=315123.000000 s hg38.chr7_KI270899v1_alt 48095 47 + 190869 TGGGAGTTTAGCGTCAGCTTGGGCAGCCTTCCCTGCTTCATGAGCTG s gorGor5.CYUI01015914v1 8686 47 - 432965 TGGGAGTTTAGCATCAGCTTGGGCAGCCTTCCCTGCTTCATGAGCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72072 47 + 85365473 CGGGAGTTTAGCATCAGCTTGGGCAGCCTTCCCTGCTTCATGAGGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33913586 47 + 185818997 TGGGAGTTCAGCGTCAGCTTGGGCGGCCTTCCCTGCTTCATGAGCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33529555 47 + 192294377 TGGGAGTTCAGCGTCAGCTTGGGCGGCCTTCCCTGCTTCATGAGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4290902 47 - 9440265 TGGGAGTTCAGCGTCAGCTTGGGCGGCCTTCCCTGCTTCATGAGCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16880549 47 - 21915920 TGGGAGTTCAGCGTCAGCTTGGGCGGCCTTCCCTGCTTCATGAGCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 20585 47 - 21531802 TGGGAGTTCAGCATCAGCTTGGGCGGCCTTCCCTGCTTCATGAGCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 36989 47 - 2515279 TGGGAGTTCAACGTCAGCTTGGGCGGCCTTCCCTGCTTCATGAGCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 200445 46 + 6586416 TGGGAGTTCAGCGTCAGCTCCGGCGGGCTTCCCTGCTTCATGA-CTG i colAng1.NW_012117710v1 I 1137 C 0 s calJac3.chr2 146564508 47 - 204313951 TGGAAGTTCAGTGTCACCTTGGGCAGCCTTCCCTGCCTCATGAGTTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 401448 47 - 2125214 TGGGAGATCAGTGTCACCTTGGGCAGCCTTCCTTGCCTCATGAGTTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 22207 47 + 376347 TGGGAGTTCAGTGTCACCTTGGGCAGCCTTCCCTGCCTCATGAGTTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108812 39 - 8137123 GGGGCATCCAGTGTCACCCTTGG--------GCTATTTCGTGAGCTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60960468 34 - 77573801 CAGAAGCACCATGTCACC-------------ACTGCCTCACGtgttg i canFam3.chr6 C 0 I 2685 a score=570886.000000 s hg38.chr7_KI270899v1_alt 48142 93 + 190869 ACCCACTAGGGGCAGGA--TCACATGAACACACGTCCTCATCTCTGACACCCTGAGACCTTAAGCAGCAAGTGCAAAGGGAGGACATCCTATG-AG s gorGor5.CYUI01015914v1 8733 93 - 432965 ACCCACTAGGGACAGGA--TCACATGAACACACGTCCTCATCTCTGACACCCTGAGACCTTAAGCAGCAAGTGCAAAGGGCGGACGTCCTATG-AG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72119 93 + 85365473 ACCCGCTGGGGAC-GGA--TCACGTGAACACACGTCCTCATCTCTGACGCCCTGAGGCCTTAAGCTGCAAGTGCAAAGAGAGCACGTCCTGTGAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33913633 95 + 185818997 ACCCGCCGGGGAGAGGATCTCACATGAACACACATCCTCGTCTCTAACACCCTGAGACCTTAAGCAGCAAGTGCAAAGGGAGGACGTCCCATG-AG i rheMac8.chr3 C 0 I 46 s macFas5.chr3 33529602 95 + 192294377 ACCCGCCGGGGAGAGGATCTCACATGAACACACATCCTCGTCTCTGACACCCTGAGACCTTAAGCAGCAAGTGCAAAGGGAGGACGTCCCATG-AG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4290949 95 - 9440265 ACCCGCCGGGGAGAGGATCTCACATGAACACACATCCTCATCTCTGACACCCTGAGACCTTAAGCAGCAAGTGCAAAGGGAGGACGTCCCATG-AG i macNem1.NW_012019910v1 C 0 I 46 s cerAty1.NW_012002954v1 16880596 95 - 21915920 ACCCGCCGGGGAGAGGATCTCACATGAACACACGTCCTCGTCTCTGACACCCTGAGACCTTAAGCAGCAAGTGCAAAGGGAGGACGTCCCATG-AG i cerAty1.NW_012002954v1 C 0 I 46 s chlSab2.chr28 20632 95 - 21531802 ACCCGCCGGGAAGAGGATCTCACATGAACACACGTCCTCGTCTCTGACACCCTGAGACCTTAAGCAGCAAGTGCAAATGGAGGACGTCCCATG-AG i chlSab2.chr28 C 0 I 46 s manLeu1.NW_012101810v1 37036 95 - 2515279 ACCCGCCGGGGAGAGGATCTCACATGAACACACGTCCTCGTCTCTGACACCCTGAGACCTTAAGCAGCAAGTGCAAAGGGAGGACGTCCCATG-AG i manLeu1.NW_012101810v1 C 0 I 46 s colAng1.NW_012117710v1 200491 95 + 6586416 ACCCACTGGGGCGAGGATCTCACGTGAACACACGTCCTCGTCTCTGACACCCAGAGACCTTAAGCAGCAAGTGCAAAGGGAGGGCCTCCCATG-AG i colAng1.NW_012117710v1 C 0 I 18 s calJac3.chr2 146564555 93 - 204313951 GCCCAGTGGGGAAAGGA--TCACATGAATGCACGTCCTCATCTCTGGCACCCTGAGACCTTAAGCAGCAAGTGCAAAGGGAGGACATCCCATG-AA i calJac3.chr2 C 0 I 1 s cebCap1.NW_016107703v1 401495 76 - 2125214 ACCCAGCAGGGAAAGGA--TCACATGAAT-----------------GCACCCTGAGACCTTAAGCAGCAAGTACAAAGAGAGGACATCCCATG-AA i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 22254 93 + 376347 ACCCAGCGGGGAGAGGA--TCACACGAACTCACGTCCTCATCTCTGGCACCCTGAGACCTTGAGCAGCAAGTGCAAAGGGAGGACATCCCATG-AA i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 2108851 89 - 8137123 ACTCA-CAGGCAGAGGG--TGACATGGAAGTCTG--CTCATTGCTGGTACCCTGAGCCCTTAAGCAGCAGGTA-ACAGGGAAGAAGTGCTGTG-GG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60960502 2685 - 77573801 I a score=3129.000000 s hg38.chr7_KI270899v1_alt 48235 3 + 190869 -TCT s gorGor5.CYUI01015914v1 8826 3 - 432965 -TCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72212 3 + 85365473 -TCT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33529698 3 + 192294377 -TCT i macFas5.chr3 I 1 C 0 s calJac3.chr2 146564649 3 - 204313951 -TCT i calJac3.chr2 I 1 I 4 s cebCap1.NW_016107703v1 401572 3 - 2125214 -TCT i cebCap1.NW_016107703v1 I 1 I 10 s aotNan1.NW_018514293v1 22348 3 + 376347 -TCT i aotNan1.NW_018514293v1 I 1 I 10 s otoGar3.GL873611 2108940 2 - 8137123 GT-- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 200586 18 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I e chlSab2.chr28 20727 46 - 21531802 I e manLeu1.NW_012101810v1 37131 46 - 2515279 I e cerAty1.NW_012002954v1 16880691 46 - 21915920 I e macNem1.NW_012019910v1 4291044 46 - 9440265 I e rheMac8.chr3 33913728 46 + 185818997 I a score=-5492.000000 s hg38.chr7_KI270899v1_alt 48238 8 + 190869 CCCTC--CTG s gorGor5.CYUI01015914v1 8829 8 - 432965 GCGTC--CTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72215 10 + 85365473 GGGCTGGCGC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33529701 5 + 192294377 GGGCT----- i macFas5.chr3 C 0 C 0 s calJac3.chr2 146564656 8 - 204313951 TGGTG--CTG i calJac3.chr2 I 4 C 0 s otoGar3.GL873611 2108942 8 - 8137123 CCATG--TTG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 200586 18 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I e chlSab2.chr28 20727 46 - 21531802 I e manLeu1.NW_012101810v1 37131 46 - 2515279 I e cerAty1.NW_012002954v1 16880691 46 - 21915920 I e macNem1.NW_012019910v1 4291044 46 - 9440265 I e rheMac8.chr3 33913728 46 + 185818997 I e aotNan1.NW_018514293v1 22351 10 + 376347 I e cebCap1.NW_016107703v1 401575 10 - 2125214 I a score=1600.000000 s hg38.chr7_KI270899v1_alt 48246 4 + 190869 TGGC s gorGor5.CYUI01015914v1 8837 4 - 432965 TGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72225 4 + 85365473 TGTC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33529706 3 + 192294377 -GGC i macFas5.chr3 C 0 I 6 s calJac3.chr2 146564664 2 - 204313951 --TT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 401585 4 - 2125214 TGTT i cebCap1.NW_016107703v1 I 10 C 0 s aotNan1.NW_018514293v1 22361 4 + 376347 TGTT i aotNan1.NW_018514293v1 I 10 C 0 s otoGar3.GL873611 2108950 4 - 8137123 GGGC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 200586 18 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I e chlSab2.chr28 20727 46 - 21531802 I e manLeu1.NW_012101810v1 37131 46 - 2515279 I e cerAty1.NW_012002954v1 16880691 46 - 21915920 I e macNem1.NW_012019910v1 4291044 46 - 9440265 I e rheMac8.chr3 33913728 46 + 185818997 I a score=56483.000000 s hg38.chr7_KI270899v1_alt 48250 29 + 190869 ----CTCAGGTGGG-AGGCCACAAGTATGCTCAC s gorGor5.CYUI01015914v1 8841 29 - 432965 ----CTCAGGTGGG-AGGCCACAAGTATGCTCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72229 29 + 85365473 ----CTCAGGTGGG-AGGCGGCAGGGATGCCCAC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33529715 28 + 192294377 ----CTCAGGTGGG-CGGCTGCAGCTGTGCTCA- i macFas5.chr3 I 6 C 0 s colAng1.NW_012117710v1 200604 28 + 6586416 ----CTCAGGTGGG-CGGCTGCAGCTGTGCTCA- i colAng1.NW_012117710v1 I 18 C 0 s calJac3.chr2 146564666 29 - 204313951 ----CTCAGGTGGG-AGGCTGCAGGTATGTTTAC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 401589 29 - 2125214 ----CTCAGGTGGG-AGGTTGCAGCTATGTTTAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 22365 29 + 376347 ----CTCAGGTGGG-AGGCTGCAGGTATGTTTAT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108954 33 - 8137123 TGTTTGCAGATGGGAAGGCCCCAGGTATGCTCA- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60960502 2685 - 77573801 I e chlSab2.chr28 20727 46 - 21531802 I e manLeu1.NW_012101810v1 37131 46 - 2515279 I e cerAty1.NW_012002954v1 16880691 46 - 21915920 I e macNem1.NW_012019910v1 4291044 46 - 9440265 I e rheMac8.chr3 33913728 46 + 185818997 I a score=1085329.000000 s hg38.chr7_KI270899v1_alt 48279 181 + 190869 AGCTCCCGCTCC-TGGTGCCTGGCAGCTCAGACCG-T---------------AGCT------------------------ACTTCTCTAGGATTTTTGCACCCAACTCACACTCTCTCCATCCAAGACTCAAACAGTGTCCCC-CT---GCCTTATGCCCGGTCACCCTGTTCTCTTCTGCGTCCAGCCTCAG---------------------------------------------------------------TTGT-------------TCCTCCTGACCCAGCCC-CTGCTTCAGCCC s gorGor5.CYUI01015914v1 8870 181 - 432965 AGCTCCCGCTCC-TGGTGCCTGGCAGCTCAGACCG-T---------------AGCT------------------------ACTTCTCTAGGATTTTTGCGCCCAACTCACACTCTCTCCATCCAAGACTCAAACAGTGTCCCC-CC---GCCTTATGCCCGGTCACCCTGTTCTCTTCTGCGTCCAGCCTCAG---------------------------------------------------------------TTGT-------------TCCTCCTGACCCAGCCC-CTGCTTCAGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72258 204 + 85365473 AGCGCCCGCTCC-TGGTGCCTGGCAGCTCAGACCA-T---------------AGCTAGGATTTATCACAACACCTAGGAAAATTCTCTAGGATTTTTGCGCCCAACTCACACTCTCTCCATCCGAGACTCAAACAGTGTCCCC-C----GCCTTATGCCCTGTCACCCTGTTCTCTTCTGCATCCAGCCTCAG---------------------------------------------------------------TTGT-------------TCCTCCTGACCCAGCCC-CTGCTTCAGTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33913774 184 + 185818997 AGCTCCCGCTCC-TGGTGCCTGGCAGCTCAGACCA-C---------------AGCT------------------------GCTTCTCTAGGATTTTCGCACCCAACTCACACTCTCTCCATCCAAGACTCAAACAGTGTCTCC-CCCTGGCCTTATGCCCGGTCACCCCGTTCTCTTCTGCATCCAGCCTCCG---------------------------------------------------------------TTGT-------------TCCCCCTGACCCAGCCC-CTGCCTCAGCCC i rheMac8.chr3 I 46 C 0 s macFas5.chr3 33529743 184 + 192294377 AGCTCCCGCTCC-TGGTGCCTGGCAGCTCAGACCA-C---------------AGCT------------------------GCTTCTCTAGGATTTTCGCACCCAACTCACACTCTCTCCATCCAAGACTCAAACAGTGTCTCC-CCCTGGCCTTATGCCCGGTCACCCTGTTCTCTTCTGCGTCCAGCCTCCG---------------------------------------------------------------TTGT-------------TCCCCCTGACCCAGCCC-CTGCCTCAGCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291090 184 - 9440265 AGCTCCCGCTCC-TGGTGCCTGGCAGCTCAGACCA-C---------------AGCT------------------------GCTTCTCTAGGATTTTCGCACCCAACTCACACTCTCTCCATCCAAGACTCAAACAGTGTCTCC-CCCTGGCCTTATGCCCGGTCACCCTGTTCTCTTCTGCATCCAGCCTCCG---------------------------------------------------------------TTGT-------------TCCCCCTGACCCAGTCC-CTGCCTCAGCCC i macNem1.NW_012019910v1 I 46 C 0 s cerAty1.NW_012002954v1 16880737 183 - 21915920 AGCTCCCGCTTC-TGGTGCCTGGCAGCTCAGACCA-C---------------AGCT------------------------GCTTCTCTAGGATTTTCGCACCCAACTCACACTCTCTCCATCCAAGACTCAAACAGTGTCTCC-CCCTGGCCTTATGCCCGGTCACCCTGTTCTCTTCTGCGTCCAGCCTCCG---------------------------------------------------------------TTGT-------------T-CCCCTGACCCAGCCC-CTGCCTCAGCCC i cerAty1.NW_012002954v1 I 46 C 0 s chlSab2.chr28 20773 180 - 21531802 AGCTCCCACTCC-TGGTGCCTGGCAGCTCAGACCA-C---------------AGCT------------------------GCTTCTCTAGGATTTTCACGCCCAACTCACACTCTCTCCATCCGAGACT----CAGTGTCTCC-CCCTGGCCTTATGCCCGGTCACCCTGTTCTCTTCTGCGTCCAGCCTCAG---------------------------------------------------------------TTGT-------------TCCCCCTGACCCAGCCC-CTGCCTCAGCCC i chlSab2.chr28 I 46 C 0 s manLeu1.NW_012101810v1 37177 184 - 2515279 AGCTCCCGCTCC-TGGTGCCTGGCAGCTCAGACCA-C---------------AGCT------------------------GCTTCTCTAGGATTTTCGCGCCCAGCTCACACTCTCTCCATCCAAGACTCAAACAGTGTCTCC-CCCTGGCCTTATGCCCGGTCACCCTGTTCTCTTCTGCGTCCAGCCTCCG---------------------------------------------------------------TTGT-------------TCCCCCTGACCCAGTCC-CTGCCTCAGCCC i manLeu1.NW_012101810v1 I 46 C 0 s colAng1.NW_012117710v1 200632 182 + 6586416 AGCT-CCGCTCC-TGGTGCCTGGCAGCTCAGACCA-C---------------AGCT------------------------GCTTCTCTAGGATTTTCGCGCCCAACTCACACT-TATCCATCCAAGACGCAAACAGTGCCCCTACTCTGGCCTTATGCCCGGTCACCCTGTTCTCTTCTGCGTCCAGCCTCAG---------------------------------------------------------------TTGT-------------TCCGCCTGACCCAGCCC-CTGCCGCAG-CC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146564695 177 - 204313951 AGCTACTGCTTC-TAGTACCTGGCAGCTCAGACCATC---------------AGCT------------------------GCTTTGCTAGGATTTTTGTGCCTAACTCACCCTCTCTCCATCCAAGACTCAAGCAGTGTTCCT------GCATTATGCCCAGTCACACCGTTCTCTTCTGCCTCCAGCCTTAG---------------------------------------------------------------TTA----------------CTCGTAACCCAGCCT-CCACCTCAGCCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 401618 177 - 2125214 AGCTCCTGCTCC-TAGTACCTGGCAGCTCAGACCATT---------------AGCT------------------------GCTTTGCTAGGATTTTTGTGCCCAACTCACCCTCTCTCCAACCAAGACTCAAGCAGTGTCCCT------GCATTATGCCCAGTCACGCTGTTCTCTTCTGCCTCCAGCCTTAG---------------------------------------------------------------TTA----------------CTCCTAACCCAGCCC-CCACCTCAGCCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 22394 177 + 376347 AGCTCCTGCTCC-TAGTACCCGGCAGCTCAGACCATC---------------AGCT------------------------GCTTTGCTAGGATTTTTGTGCCTAACTCACCCTCTCTCCATCCAAGACTCAAGCAGTGTCCCT------GCATTATGCCCGGTCATGCCGTTCTCTTCTGCCTCCAGCCTTAG---------------------------------------------------------------TTA----------------CTCCTAACCCAGCCC-CCACCTCAGCCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2108987 266 - 8137123 ---GCCCACCCTGGGGCACCAAGCAATTCAGACTT-CCTCGTCCCTCTTTGAGGCT------------------------GCTCTGCTAGGACTTTGGTGCCCGACTCACCCTCTCTCTATCCAAGACTCACACCATG-CCTT------GCTTTGTGCCCCATCAGCCTGCTGTCTTCTGCCCCCAGCCTCCACGGCGCCTCACCCGCCCCACCCTCACCCCATCCTATCTGAAGACCTGAAGCACTGTCGCCCCCTTGTGCCCAGGCTCCCCTCCTGCTGGCCCTGCCCACTGC--CAGCCC i otoGar3.GL873611 C 0 I 108 e canFam3.chr6 60960502 2685 - 77573801 I a score=220344.000000 s hg38.chr7_KI270899v1_alt 48460 38 + 190869 AGGACCACCTGAAGC------------------------------------------------------------------CTCCCCTCT--------------------------------------------------------GGGTTCCAG----------------CACTT s gorGor5.CYUI01015914v1 9051 38 - 432965 AGGACCACTTGAAGC------------------------------------------------------------------CTCCCCTCT--------------------------------------------------------GAGTGCCAG----------------CActt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72462 38 + 85365473 AGGACCACCTGAAGC------------------------------------------------------------------CTCCCCTCT--------------------------------------------------------GGGTGCCAG----------------CACTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33913958 38 + 185818997 AGGACCACCTGAAGC------------------------------------------------------------------CTCTCCTCT--------------------------------------------------------GGGCACCAG----------------CACTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33529927 38 + 192294377 AGGACCACCTGAAGC------------------------------------------------------------------CTCTCCTCT--------------------------------------------------------GGGCGCCAG----------------CACTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291274 38 - 9440265 AGGACCACCTGAAGC------------------------------------------------------------------CTCTCCTCT--------------------------------------------------------GGGCGCCAG----------------CActt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16880920 38 - 21915920 AGGACCACCTGAAGC------------------------------------------------------------------CTCTACTCT--------------------------------------------------------GGGCGCCAG----------------CActt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 20953 38 - 21531802 AGGACCACCTGAAGC------------------------------------------------------------------CTCTCTTCT--------------------------------------------------------GGGTGCCCG----------------CACTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 37361 38 - 2515279 AGGACCACCTGAAGC------------------------------------------------------------------CTCTCCTCT--------------------------------------------------------GGGCGCCAG----------------CACTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 200814 38 + 6586416 AGGACCACCTGAAGC------------------------------------------------------------------CTCTCCTCT--------------------------------------------------------GGGCGCCAG----------------CACTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146564872 38 - 204313951 AGGACCACCTGAAGC------------------------------------------------------------------CTCCCCTCT--------------------------------------------------------GGGTGCCAG----------------CACTT i calJac3.chr2 C 0 I 1 s cebCap1.NW_016107703v1 401795 38 - 2125214 AGGACCACCTGAAGC------------------------------------------------------------------CTCCCCTCT--------------------------------------------------------GGGTGCCAG----------------CACTT i cebCap1.NW_016107703v1 C 0 I 401 s aotNan1.NW_018514293v1 22571 38 + 376347 AGGACCACCTGAAGC------------------------------------------------------------------CTCCCCTCT--------------------------------------------------------GGGTGCCAG----------------CACTT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2109361 176 - 8137123 AGGACAGCCTGAAGTGTGGGCCCCAGGGCAAAGCCTGCTCCAGGGAGGGCTAGCTCTATGCAGCCAACAGAAAGTGCCCTGCCCCGTTCTCAGCTCAGCCTGAGAAGAGGTCATCAGGAGCTGTAGTCTCAGGCTTCTGCAGCATCGGGCTtcagaaagccctgccccgaccactc i otoGar3.GL873611 I 108 C 0 e canFam3.chr6 60960502 2685 - 77573801 I a score=27913.000000 s hg38.chr7_KI270899v1_alt 48498 6 + 190869 CCCTCC----- s gorGor5.CYUI01015914v1 9089 6 - 432965 ccctcc----- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72500 6 + 85365473 CCCTCC----- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33913996 6 + 185818997 CCCTCC----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33529965 6 + 192294377 CCCTCC----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291312 6 - 9440265 ccctcc----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16880958 6 - 21915920 ccctcc----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 20991 6 - 21531802 CCCTCC----- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 37399 6 - 2515279 CCCTCC----- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 200852 6 + 6586416 CCCTCC----- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146564911 6 - 204313951 ACCTCC----- i calJac3.chr2 I 1 C 0 s aotNan1.NW_018514293v1 22609 6 + 376347 ACCTCC----- i aotNan1.NW_018514293v1 C 0 I 393 s otoGar3.GL873611 2109537 10 - 8137123 -tgcccagggc i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60960502 2685 - 77573801 I e cebCap1.NW_016107703v1 401833 401 - 2125214 I a score=55958.000000 s hg38.chr7_KI270899v1_alt 48504 13 + 190869 GTCATGATCTGCA s gorGor5.CYUI01015914v1 9095 13 - 432965 atcatgatctgca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72506 13 + 85365473 GTCACGATCTGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914002 13 + 185818997 ATCATGGTCTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33529971 13 + 192294377 GTCATGGTCTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291318 13 - 9440265 gtcatggtctgca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16880964 13 - 21915920 gtcatggtctgca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 20997 13 - 21531802 GTCATGGTCTGTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 37405 13 - 2515279 GTCATGGTCTGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 200858 13 + 6586416 GTCATGGTCTGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146564917 12 - 204313951 ATCA-GATCTGTA i calJac3.chr2 C 0 I 353 s otoGar3.GL873611 2109547 13 - 8137123 agcctggcctgct i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60960502 2685 - 77573801 I e aotNan1.NW_018514293v1 22615 393 + 376347 I e cebCap1.NW_016107703v1 401833 401 - 2125214 I a score=105498.000000 s hg38.chr7_KI270899v1_alt 48517 24 + 190869 CTCCTGCTTTTTCTCGCAT--------GATTT s gorGor5.CYUI01015914v1 9108 24 - 432965 ctcctgctttttctcgcat--------gattt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72519 24 + 85365473 CTCCTGCTTTTTCTCTCCT--------GATTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914015 24 + 185818997 CTCCTGCTTTTTCTCTCAT--------GATTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33529984 24 + 192294377 CTCCTGCTTTTTCTCTCAT--------GATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291331 24 - 9440265 ctcctgctttttctctcat--------gattt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16880977 24 - 21915920 ctcctgctttttctctcat--------gattt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21010 24 - 21531802 CTCCTGCTTTTTCTCTCAT--------GATTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 37418 24 - 2515279 CTCCTGCTTTTTCTCTCAT--------Gattt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 200871 24 + 6586416 CTCCTGCTGCTTCTCTCAC--------GATTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146565282 22 - 204313951 ctccagct--ttctctcct--------gatac i calJac3.chr2 I 353 C 0 s otoGar3.GL873611 2109560 32 - 8137123 ctcccacttgcactctcctcacggaccggttt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60960502 2685 - 77573801 I e aotNan1.NW_018514293v1 22615 393 + 376347 I e cebCap1.NW_016107703v1 401833 401 - 2125214 I a score=776948.000000 s hg38.chr7_KI270899v1_alt 48541 114 + 190869 CCCCTCCTGCCACTCCTCACCATCTAAAACAGTGTTCACTTCTGTTTTGCTGTATTGTCTGGCTGTCCTGTATGTGTCTGAGCTCATGAG---------------------GGATATTGCATCCCTGTACCCAGG s gorGor5.CYUI01015914v1 9132 114 - 432965 cccctcctgccactcctcaccatctaaaacagtgttcacttctgttttgctgtattgtctggctgtcctgtatgtgtctgagctcacgag---------------------gaatattgcatccctgtacccagg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72543 114 + 85365473 CCCCTCCTGGCACTCCTCACCATCTAGAACAGTGTTCACTTCTGTTTTGCTGTGTTGTCTGGCTGTCCTGTATGTGTCTGAGCTCATGAG---------------------GGATATTGCAACCCTATACTCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914039 114 + 185818997 CCCCTCCTGGCACTCCTCACCATCTCAGACAGTGTTCACTTTTGTTTTGCTGTGTTTTCTGGCTGCCCCGTATGTGTCTGAGCTCATGAG---------------------GGATAGTGCATCCCTGTACCCAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530008 114 + 192294377 CCCCTCCTGGCACTCCTCACCATCTCAGACAGTGTTCACTTTTGTTTTGCTGTGTTTTCTGGCTGCCCCGTATGTGTCTGAGCTCATGAG---------------------GGATAGTGCATCCCTGTACCCAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291355 114 - 9440265 cccctcctggcactcctcaccatctcagacagtgttcacttttgttttgctgtgtttcctggctgccccgtatgtgtctgagctcatgag---------------------ggatagtgcatccctgtacccagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881001 114 - 21915920 cccctcctggcactcctcaccatctcagacagtgttcacttttgttttgctgtgttttctggctgccccgtatgtgtctgagctcatgag---------------------ggatattgcatccctgtacccagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21034 114 - 21531802 CCCCTCCTGGCACTCCTCACCATCTCAGACAGTGTTCACTTTTGTTTTGCTGTGTTTTCTGGCTGCCCCGTATGTGTCTGAGCTCATGAG---------------------GGATATtgcatccctgtacccagg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 37442 114 - 2515279 cccctcctggcactcctcaccatctcagacagtgttcacttctgttttgctgtgttttctggctgccccgtatgtgtctgagctcataag---------------------ggatattgcatccctgtacccagg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 200895 113 + 6586416 -CCCTCCTGGCCCTCCTCACCGTCTCAGACAGTGTTCACGTTTGTTCTGCTGTGTTTTCTGGCTGCCCCGTATGTGTCTGAGCTCATGAG---------------------GGATATTGCATCCCTGTACCCAGG i colAng1.NW_012117710v1 C 0 I 12 s calJac3.chr2 146565304 114 - 204313951 cccctcctggcactcctcaccacctaaagcagtgttctcttgtgttttgctgtgttgttgggctgtcctgtatgtgtctgagctcatgag---------------------ggatattgcgtccccgtacccagg i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 402234 114 - 2125214 cccctcctggcactcctcaccacctaaagcagtgttcacttgtgttttgctgtattgtcgggctgtcctgtatgtgtctgagctcatgag---------------------ggatattgcatccctgtacccagg i cebCap1.NW_016107703v1 I 401 C 0 s aotNan1.NW_018514293v1 23008 114 + 376347 CCCCTCCTGGCACTCTTCACCACCTAAAGCAGTGTTCACTTGTATTTTGCTGTATTGTTGGGCTGTCCTGTATGTGTCTGAGCTCATGAG---------------------GGAtattgcatccccattcccagg i aotNan1.NW_018514293v1 I 393 C 0 s otoGar3.GL873611 2109592 133 - 8137123 catgaccctgcactcc-caccacctgagacagtgttcacttgttctctggcttattgtctgcctctcctatatgagggtgagctcttgaggacaagagtttgtctgtcttcggacgttgt-ccccagtgccaaga i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60960502 2685 - 77573801 I a score=434621.000000 s hg38.chr7_KI270899v1_alt 48655 77 + 190869 AGAGTGTCTGGCAGAGAGCAGGTGCTGCGCAAACAAGCAATACATGAGTAAGCAAGTGAGCCAGAGAGTACAGGCAG s gorGor5.CYUI01015914v1 9246 77 - 432965 agagtgtctggcagagagcaggtgctgagcaaataAGCAATACATGAGTAAGCAAGTGAGCCAGAGAGTACAGGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72657 77 + 85365473 AGAGCGTCTGGCAGAGAGCAGGTGCTGAGCAAATAGGCAACACGTAAGTAAGCAAGTGAGCCAGAGAGTACAGGCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914153 76 + 185818997 AGAGTGTCTGGCAGAGAGCAGATGCTGGGCAAATAAGCAATACACGAGTAAGCAAGTGACCCAGAGAGTGT-GGTAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530122 76 + 192294377 AGAGTGTCTGGCAGAGAGCAGATGCTGGGCAAATAAGCAATACACGAGTAAGCAAGTGACCCAGAGAGTGC-GGTAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291469 76 - 9440265 agagtgtctggcagagagcagatgctgggcaaataAGCAATACACGAGTAAGCAAGTGACCCAGAGAGTGC-GGTAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881115 76 - 21915920 agagtgtctggcagagagcagatgctgggcaaataAGCAATACACGAGTAAGCAAGTGACCCAGAGAGTGC-GGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21148 76 - 21531802 agagtgtctggcagagagcagatgctgagcaaatAAGCAATACACGAGTAAGCAAGTGACTCAGAGAGTGC-GGCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 37556 76 - 2515279 agagtgtctggcagagagcagatgctgggcaaataAGCAATACATGAGTAAGCAAGTGACCCAGAGAGTGC-GGCAG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565418 76 - 204313951 agagtgtctggcagagagcagacactgagcaaataAGCAATACGTGAGTAAGCATGTGAG-CAGAGAGTATAGGCAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 402348 76 - 2125214 agagtgtctggcagacagcagacgctgagcaactaAGCAATACGTGAGTAAGCACGTGAG-CAGAGAGTGTAGGCAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 23122 76 + 376347 agagtgtctggcagagagcagatgctgagcaaataAGCAATACGTGAGTAAGCATGTGAG-CAGAGAGTGCAGGCGG i aotNan1.NW_018514293v1 C 0 I 885 s otoGar3.GL873611 2109725 77 - 8137123 agagtatctggcagggagcaggtactcagcaagtggccgatggatgagtgaaCAAATGAGTCAGAGGGCGAGGGCAG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I a score=159230.000000 s hg38.chr7_KI270899v1_alt 48732 47 + 190869 TACCCATATGCCACAGCTTCCCATGCGGCTCTACTAGGAATCA--------------------------------------------CTCT------------------ s gorGor5.CYUI01015914v1 9323 47 - 432965 CACCCATATGCCACAGCTTCCCATGCGGCTCTACTAGGAGTCA--------------------------------------------CTCT------------------ i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72734 46 + 85365473 CACCCATATGCCACAGCTTCCCGTGCGGCTCTACTA-GAATCA--------------------------------------------CTCT------------------ i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914229 45 + 185818997 CAGCC--ATGCCACGGCTTTCCATGTGGGTCCACTAGGAATCA--------------------------------------------TTCT------------------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530198 45 + 192294377 CAGCC--ATGCCACGGCTTCCCATGTGGGTCCACTAGGAATCA--------------------------------------------TTCT------------------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291545 45 - 9440265 CAGCC--ATGCCACGGCTTCCCATGTGGGTCCACTAGGAATCA--------------------------------------------TTCT------------------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881191 45 - 21915920 CAGCC--ATGCCACGGCTTCCCATGTGGGTCCACTAGGAATCA--------------------------------------------TTCT------------------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21224 45 - 21531802 CAGCC--ATGCCACAGCTTCCCATGTGGGTCCACTAGGAATCA--------------------------------------------TTCT------------------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 37632 45 - 2515279 CAGCC--ATGCCATGGCTTCCCATGTGGGTCCACTAGGAATCA--------------------------------------------TTCT------------------ i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565494 45 - 204313951 CACCT--GTGCCACAGCTTCCCATGTGGCTCTACTAGGCATCA--------------------------------------------CTCT------------------ i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 402424 45 - 2125214 CACCT--GTGCCACAGCTTCCCATGTGGCTCTACTAGGCATCA--------------------------------------------CTCT------------------ i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2109802 107 - 8137123 CACCT--ATGCGGAGGCTTCCTGCCTGCTGTTTCTGGATGTCAGCAGCTCCTTGGCCAGTTGTCCCCTTCCCTGTGTTGGTGTCCCCTTCCCTGTATGGCTGTCACCTA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I e aotNan1.NW_018514293v1 23198 885 + 376347 I a score=22698.000000 s hg38.chr7_KI270899v1_alt 48779 3 + 190869 GCT s gorGor5.CYUI01015914v1 9370 3 - 432965 GCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72780 3 + 85365473 GCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914274 3 + 185818997 GCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530243 3 + 192294377 GCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291590 3 - 9440265 GCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881236 3 - 21915920 GCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21269 3 - 21531802 GCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 37677 3 - 2515279 GCT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565539 3 - 204313951 GCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 402469 3 - 2125214 GCT i cebCap1.NW_016107703v1 C 0 I 377 s aotNan1.NW_018514293v1 24083 3 + 376347 GCT i aotNan1.NW_018514293v1 I 885 C 0 s otoGar3.GL873611 2109909 3 - 8137123 GCT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I a score=78554.000000 s hg38.chr7_KI270899v1_alt 48782 14 + 190869 CCACGGCCAAGGCC s gorGor5.CYUI01015914v1 9373 14 - 432965 CCACCGCCAAGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72783 14 + 85365473 GCACGGCCAAGGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914277 14 + 185818997 CCATGGCCAAGGCC i rheMac8.chr3 C 0 I 294 s macFas5.chr3 33530246 14 + 192294377 CCATGGCCAAGGCC i macFas5.chr3 C 0 I 294 s macNem1.NW_012019910v1 4291593 14 - 9440265 CCATGGCCAAGGCC i macNem1.NW_012019910v1 C 0 I 168 s cerAty1.NW_012002954v1 16881239 14 - 21915920 CCATGGCCAAGGCC i cerAty1.NW_012002954v1 C 0 I 42 s chlSab2.chr28 21272 14 - 21531802 CCATGGCCAAGGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 37680 14 - 2515279 CCATGGCCAAGGCC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565542 14 - 204313951 CCATGGCCAAGGCC i calJac3.chr2 C 0 I 126 s cebCap1.NW_016107703v1 402849 14 - 2125214 CCATGGCCAAGGTC i cebCap1.NW_016107703v1 I 377 C 0 s aotNan1.NW_018514293v1 24086 14 + 376347 CCATGGCCAAGGTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2109912 14 - 8137123 ATGTGGCCAGGCAT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I a score=14898.000000 s hg38.chr7_KI270899v1_alt 48796 2 + 190869 TC s gorGor5.CYUI01015914v1 9387 2 - 432965 TC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72797 2 + 85365473 TC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914585 2 + 185818997 TC i rheMac8.chr3 I 294 C 0 s macFas5.chr3 33530554 2 + 192294377 TC i macFas5.chr3 I 294 C 0 s macNem1.NW_012019910v1 4291775 2 - 9440265 TC i macNem1.NW_012019910v1 I 168 C 0 s cerAty1.NW_012002954v1 16881295 2 - 21915920 TC i cerAty1.NW_012002954v1 I 42 C 0 s chlSab2.chr28 21286 2 - 21531802 TC i chlSab2.chr28 C 0 I 209 s manLeu1.NW_012101810v1 37694 2 - 2515279 TC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565682 2 - 204313951 TC i calJac3.chr2 I 126 C 0 s cebCap1.NW_016107703v1 402863 2 - 2125214 TC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 24100 2 + 376347 TC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2109926 2 - 8137123 TC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I a score=7800.000000 s hg38.chr7_KI270899v1_alt 48798 1 + 190869 C s gorGor5.CYUI01015914v1 9389 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72799 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914587 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530556 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291777 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881297 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21497 1 - 21531802 C i chlSab2.chr28 I 209 C 0 s manLeu1.NW_012101810v1 37696 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 I 3770 s calJac3.chr2 146565684 1 - 204313951 C i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 402865 1 - 2125214 C i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 24102 1 + 376347 C i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2109928 1 - 8137123 C i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I a score=129731.000000 s hg38.chr7_KI270899v1_alt 48799 22 + 190869 CCTCCCTGTGTCGGTGTC--------------------------------CCCG s gorGor5.CYUI01015914v1 9390 22 - 432965 CCTCCCTGTGTCGGTGTC--------------------------------CCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72800 22 + 85365473 CCTCCCTGTGTTGGTGTC--------------------------------CCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914588 22 + 185818997 CCTCCCTGTGCTGGTGTC--------------------------------CCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530557 22 + 192294377 CCTCCCTGTGCTGGTGTC--------------------------------CCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291778 22 - 9440265 CCTCCCTGTGCTGGTGTC--------------------------------CCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881298 22 - 21915920 CCTCCCTGTGCTGGTGTC--------------------------------CCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21498 22 - 21531802 CCTCCCTGTGCTGGTGTC--------------------------------CCCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 41467 22 - 2515279 CCTCCCTGTGCTGGTGTC--------------------------------CCCA i manLeu1.NW_012101810v1 I 3770 C 0 s calJac3.chr2 146565685 22 - 204313951 CCTCCCTGTATTAGTGTC--------------------------------CCCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 402866 22 - 2125214 TCTCCCTGTATTGGTGTC--------------------------------CCCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 24103 22 + 376347 CCTCCCTGTATTGGTGTC--------------------------------CCCA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2109929 54 - 8137123 CCTCTCTGTATTAGTGTCATCCAGTGTCCCCTCCCCATGTATTAGTGTCACCCA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I a score=1170932.000000 s hg38.chr7_KI270899v1_alt 48821 181 + 190869 GCTCCATGGCCAAGGTGTTGCCTCCTACTGAACGATTCTGAGA-TGCC-TGAACACCATGTGGTTAATCCCAGAGGAAAGTTTCACCGTTGGAATCCAGGCCCTGGCAGGAACTCAGAAGGGGGCCTTTGTCAGCTGCCCTCATCTCCCTTTGGTGAGAGAGCACATTAAAGGCCGAGAGTCC s panTro5.chrUn_NW_015974890v1 538 181 - 15765 GCTCCATGGCCAAGGTGTTGCCTCCTACTGAACGATTCTGAGA-TGCC-TGAACACCATGTGGTTAATCCCACAGGAAAGTTTCACCGTTGGAATCCAGGCCCTGGCAGGAACTCAGAAGGGGGCCTTTGTCAGCTGCCCTCATCTCCCTTTGGTGAGAGAGCACATTAAAGGCCGAGAGTCC i panTro5.chrUn_NW_015974890v1 N 0 C 0 s gorGor5.CYUI01015914v1 9412 181 - 432965 GCTCCATGGCCAAGGTGCTGCCTCCTACTGAACGATTCTGAGA-TGCC-TGAACACCATGTAGTTAATCCCAGAGGAAAGTTTCACCGTTGGAATCAAGGCCCTGGCAGGAACTCAGAAGGGTGCCTTTGTCAGCTGCCCTCATCTCCCTTTGGCGAGACAGCGCACTAAAGGCTGAGAGTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 72822 181 + 85365473 GCTCCATGGCCAAGGTGTTGCCTCCTGCTGAACGATTCTGAGA-TGCC-TGAACACCATGTGGTTAATCCCAGAGGAAAGTTTCACCGTTGGAATCAAGGCCCCGGCAGGAACTCAGAACGGGGCCTTTGTCAGCTGCCCTCATCTCCCTTTGGCGAGAGAGCACATCGAAGGCCCAGAGTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914610 181 + 185818997 GCTCCATGGCCAAAGTGTTGCCTCCTGCTGAACGATTCTGAGA-TGCC-TCAACACCATGCGGTTAATCCCAGAGGAAAGTTTCTCTGTTGGAATCAAGGCCCTGGCAGGAACTCAGATGGGGGCCTTTGTCAGCTGCCCTCATCTCCCCTTGGCGAGAGAGCACCTTAAAGGTCGAGAGTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530579 181 + 192294377 GCTCCATGGCCAAAGTGTTGCCTCCTGCTGAACGATTCTGAGA-TGCC-TCAACACCATGCGGTTAATCCCAGAGGAAAGTTTCTCTGTTGGAATCAAGGCCCTGGCAGGAACTCAGATGGGGGCCTTTGTCAGCTGCCCTCATCTCCCCTTGGCGAGAGAGCACATTAAAGGTCGAGAGTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291800 181 - 9440265 GCTCCATGGCCGAAGTGTTGCCTCCTGCTGAACGATTCTGAGA-TGCC-TCAACACCATGCGGTTAATCCCAGAGGAAAGTTTCTCTGTTGGAATCAAGGCCCTGGCAGGAACTCAGATGGGGGCCTTTGTCAGCTGCCCTCATCTCCCCTTGGTGAGAGAGCACATTAAAGGTCGAGAGTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881320 180 - 21915920 GCTCCATGGCCAAAGTGTTGCCTCCTGCTGAACGATTCTGAGA-TGCC-TCAACACCATGTGGTTAATCCCAGAGGAAAGTTTCTCTGTTGGAATCAAGGCCCTGGCAGGAACTCAGAAGGGGGCCTTTGTCAGCTGCCCTCATCTCCCCTTGGTGAGAGAGCACATTAAAGGT-GAGAGTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21520 180 - 21531802 GCTCCATGGCCAAAGTGTTGCCTCCTGCTGAACGATTCTGAGA-TGCC-TCAACACCATGCGGTTAATCCCAGAGGAAAGTTTCTCTGTTGGAATCAAGGCCCTGGCAGGAACTCACAAGGGGGCC-TTGTCAGCTGCCCTCATCTCCCCTTGGCGAGAGAGCACATTAAAGGCCGAGAGTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 41489 180 - 2515279 ACTCCATGGCCAAAGTGTTGCCTCCTGCTGAACGATTCTGAGA-TGCC-TCAACACCATGTGGTTAATCCCAGAGGAAAGTTTCTCTGTTGGAATCAAGGCCCTGGCAGGAACTCAGAAGGGGGCCTTTGTCAGCTGCCCTCATCTCTCCTTGGTGAGAGAGCACATTAAAGG-TGAGAGTCC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565707 174 - 204313951 GCCCCATGGCCAAGGTTTTGCCTCTCCCTGAACAATTCAGAGA-TGCC-TGAA-------GGTTTAATTCCAGAGGAAAGTTTTGCTGTTGAAATCAAGGCCCTGGGAGGAACTCAAAAGAGGTCCTTTGTCAGCTGCCCTCATCTCCCCTTGGCAAGAGAGCACATTAAAGGCCGAGAGTCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 402888 175 - 2125214 GCCCCATGACCAAGGTTTTGGCTCTCCCTGAACAATTCTGAGA-TGCC-TGAAT------TGTTTAATTCCAGAGGAAAGTTTTACTGTTGAAATCAAGGCCCTTGGAGGGACTCAAATGGGAGCCTTTGTCAGCTGCCCTCATCTCCCCTTGGTGAGAGAGCACATTAAAGGCCAAGAGTCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 24125 175 + 376347 GCCCCAAGGCCAAGGTTTTGGCGCTCCCTGAACAATTCTGAGA-TGCC-TGAAT------TGTTTAATTCCAGAGGAAAGTTTTACTGTTGAAATCAAGGCCCTGGGAGGAACTTAAAAGGGGGCCTTTGTCAGCTGCCCTCATCTCCCCTTGGTGAGAGAGCACATTAAAGACCAAGAGTCC i aotNan1.NW_018514293v1 C 0 I 5806 s otoGar3.GL873611 2109983 149 - 8137123 GCCCCATGGCCAAAGTGTCCCCTCCCTCTGAAGGATGTGGAAACTGCTGTGAACACCCTGTGTTCAGTCACAGGGGAAAG------------------GACCCTGGCAGGACCTCAGAAGGGGTCATTTCTTGGCTGCCCTTGTCTCTCCTTG----------------CAGACTGAGGATCC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I a score=135989.000000 s hg38.chr7_KI270899v1_alt 49002 31 + 190869 ATCCATGAGAG-CAGCGCCGGGCGACACACGT s panTro5.chrUn_NW_015974890v1 719 31 - 15765 ATCCATGAGAG-CAGCGCCGGGCGACACACGT i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 9593 32 - 432965 ATCCATGAGAGCCAGTGCCGGGCGACACACGT i gorGor5.CYUI01015914v1 C 0 I 165 s nomLeu3.chr20 73003 31 + 85365473 ACCCATGAGAG-CGGCGCCGGGCAACACACAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914791 30 + 185818997 A-CCATGAGAG-AAGCGCTGGGTGACACATGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530760 30 + 192294377 A-CCATGAGAG-AAGCGCTGGGTGACACATGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4291981 30 - 9440265 A-CCATGAGAG-AAGCGCTGGGTGACACATGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881500 30 - 21915920 A-CCATGAGAG-AAGCGCTGGGCGACGCATGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21700 30 - 21531802 A-CCATGAGAG-AAGCGCTGGGCAACACATGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 41669 30 - 2515279 A-CCATGAGAG-AAGCGCTGGGCGACACATGT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565881 31 - 204313951 ATCCATGAGAG-CAGTGCTGGCTGATACACAT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 403063 31 - 2125214 GTCCATGAGAG-CAGTGCCAGGTGATACACAT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2110132 31 - 8137123 ACCCCTGGAAG-AATGGCTTGGCTATGTGTGT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I a score=89349.000000 s hg38.chr7_KI270899v1_alt 49033 20 + 190869 AACTGCTAAATGAATGAGTG s panTro5.chrUn_NW_015974890v1 750 20 - 15765 AACTGCTAAATGAATGAGTG i panTro5.chrUn_NW_015974890v1 C 0 C 0 s nomLeu3.chr20 73034 20 + 85365473 AACTGCTGAATGAACGAGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914821 20 + 185818997 AACTGCTAAATGAGTCAGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530790 20 + 192294377 AACTGCTAAATGAGTCAGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4292011 20 - 9440265 AACTGCTAAATGAGTCAGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881530 20 - 21915920 AACTGCTAAATGAGTCAGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21730 20 - 21531802 AACTGCTAAATGAGTCAGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 41699 20 - 2515279 AACTGCTAAATGAGTCAGTG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565912 20 - 204313951 AACTGCTGAATGAATGAGTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 403094 20 - 2125214 AACTGCTGAATGAATGAGTG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2110163 15 - 8137123 -----GCAAAGGAATGGAGG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I e gorGor5.CYUI01015914v1 9625 165 - 432965 I a score=213815.000000 s hg38.chr7_KI270899v1_alt 49053 46 + 190869 AACA-ATGAACAAACTCTGGAGGCAGAGTCCTTAGGGGTTGG--------------------------------CC--CGG s panTro5.chrUn_NW_015974890v1 770 46 - 15765 AACA-ATGAACAAACTCTGGAGGGAGAGTCCTTCGGGGTTGG--------------------------------CC--CGG i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 9790 46 - 432965 AACA-ATGAACAAACTCTGGAGGGAGAGTCCTTCGGGGTTGG--------------------------------CC--CGG i gorGor5.CYUI01015914v1 I 165 C 0 s nomLeu3.chr20 73054 45 + 85365473 AACC-ATGAACAAACTCTGGAGGGAGAGTCCGT-AGGGCTGG--------------------------------CC--CGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914841 46 + 185818997 AGCA-ATGAACGAACTCTGGATGGAGTATCCTTAGGGGCTGG--------------------------------CC--CGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530810 46 + 192294377 AGCA-ATGAACGAACTCTGGATGGAGTATCCTTAGGGGCTGG--------------------------------CC--CGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4292031 46 - 9440265 AGCA-ATGAACGAACTCTGGATGGAGTATCCTTAGGGGCTGG--------------------------------CC--CGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881550 46 - 21915920 AGCA-ATGAACGAACTCTGGATGGAGTATCCTTAGGGGCTGG--------------------------------CC--CGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21750 78 - 21531802 AACA-ATGAACGAACTCTGGATGGAGCATCTTTAGGGTCTGGCCCGGTGTCTGAATCTCCCTGCGCCATGAGCGCC--CGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 41719 46 - 2515279 AGCA-ATGAACGAACTCTGGATGGAGTATCCTTAGGGGCTGG--------------------------------CC--CGG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565932 46 - 204313951 AACA-GTGAACAAACTTGGGATGGAGCATCCTTAGGGGTTGG--------------------------------CC--CAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 403114 46 - 2125214 AACA-GTGAACGAACTTGGGATGGAGTGTCCTTAGGGGTTGG--------------------------------CC--CAG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2110178 46 - 8137123 AACACGTGAACAGACT--GGAGGGTGCACTCCT-GGGGCAGA--------------------------------TCTTCAG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e canFam3.chr6 60960502 2685 - 77573801 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I a score=1904166.000000 s hg38.chr7_KI270899v1_alt 49099 353 + 190869 TCTCCGAATTTCCCTGTGCCGTGAGTGCTGGCCCCCAAGA------GGGTTCCGCTGGGCCT-TCT--CAGACCTCCTCAGG-----------------------------------CT--CAGCAGCGCCGGA--TCATGACATCACCACTC-A-TTCCCAGCTCTC------------CCTGGGATAGTCTCTCAAATGATTAGTGC-CAACAATCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGCacaaa-ccttaaagtatatc-tg-attattgtccccattttaacaggaggaaac-aagcacagacaggtttagttacctgtccaggagcacacagtgagcattggcagagccaacgtatttttccc--cag-----tctgactccagagctgggcctctaccc-agggtg s panTro5.chrUn_NW_015974890v1 816 354 - 15765 TCTCCGAATTTCCCTGTGCTGTGAGTGCTGGCCCCCAAGA------GGGTTGTGCTGGGCCT-TCT--CGGACCTCCTCAGG-----------------------------------CT--CAGCAGCGCCGGA--TCATGACATCACCACTC-A-TTCCCAGCTCTT------------CCTTGGATAGTCTCTCAAATGATTAGTGC-CAACAATCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGCacaaa-tcttaaagtatatc-tg-attattgtccccattttaacaggaggaaac-aagcacagataggtttagttacctgtccaggagcacacagtgagcattggcagagccaacgtatttttccc--cag-----tctgactccagagctgggcctctacccaAGGGTG i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 9836 353 - 432965 TCTCCGAATTTCCCTGTGCTGTGAGTGCTGGCCCCCAAGA------GGGTTCCGCTGGGCCT-TCT--CAGACCTCCCCAGG-----------------------------------CT--CAGCAGCGCCGGA--TCATGACATCACCACTC-A-TTCCCAGCTCTC------------CCTGGGATAGTCTCTCAAATGATTAGTGC-CAACAATCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGCacaaa-ccttaaagtatacc-tg-attattgtctccattttaacaggaggaaac-aagcacagacaggtttagttacctgcccaggagcacacagtgagcattggcagagccaacgtatttttccc--cag-----tctgactccagagctgggcctctagcc-agggtg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 73099 345 + 85365473 TCTCTCAATTGCCCTGTGCTGTGAGTGCTGGCCCCCAA-A------GGGTTCTGCTGGGCCT-TCT--CTGACCTCCTCAGG-----------------------------------CT--CAGCGGCGCCGGA--TCATGACATTCCCACTC-A-TG-CCAGCTCTC------------CCTGGGTGAGTCTCTCAGATGGTTAGTGC-CAACAATCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGCACAAC-CCTT----TATATC-TG-attattgtccccattttaacaggaggaa---aagcacagacaggtttagttacctgtccaggagcacacagtgagcactggcagagccaacatacttttccc--cag-----tctgaccccagagctgggcctctagcc-aGGGTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33914887 333 + 185818997 TGTCTGAATCTCCCTGTGCTGTGAG---------------------------CTCTAGGCCT-CCT--CTGACCTCCTCAGC-----------------------------------CT--CAGCAGCACCGGA--TCATGacatcccgactc-c-ttcccagctctc------------cctgggatagtctctcaaacaatgagtgc-caacactccttgactccagctctgtttcttgtgtaattcaaaataagCacaaccccttaaagtatatc-tg-attattgtccccattttaacacgaggaaac-aagcacagacaggtttagttacctgtccaggggcacacagtgagcactggcagagctaacgtgtttttccc--cag-----tctgactccagggctgggcctctagcc-agggta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33530856 333 + 192294377 TGTCTGAATCTCCCTGTGCTGTGAG---------------------------CTCTAGGCTT-CCT--CTGACCTCCTCAGC-----------------------------------CT--CAGCAGCACCGGA--TCATGACATCCCGACTC-C-TTCCCAGCTCTC------------CCTGGGATAGTCTCTCAAACAATGAGTGC-CAACACTCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGCacaaccccttaaagtatatc-tg-attattgtccccattttaacacgaggaaac-aagcacagacaggtttagttacctgtccaggggcacacagtgagcactggcagagctaacgtatttttccc--cag-----tctgactccagggctgggcctctagcc-agggta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4292077 333 - 9440265 TGTCTGAATCTCCCTGTGCTGTGAG---------------------------CTCTAGGCCT-CCT--CTGACCTCCTCAGC-----------------------------------CT--CAGCAGCACCGGA--TCATGACATCCCGACTC-C-TTCCCAGCTCTC------------CCTGGGATAGTCTCTCAAACAATGAGTGC-CAACACTCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGCacaaccccttaaagtatatc-tg-attattgtccccattttaacatgaggaaac-aagcacagacaggtttagttacctgtccaggggcacacagtgagcactggcagagctaacgtatttttccc--cag-----tctgactccagggctgggcctctagcc-agggta i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881596 333 - 21915920 TGTCTGAATCTCCCTGCGCCATGAG---------------------------CGCTGGGCCT-CCT--CTGACCTCCTCAGC-----------------------------------CT--CAGCAGCACCGGA--TCATGACATCCCGACTC-C-TTCCCAGCTCTC------------CCTGGGATAGTCTCTCAAACAATGAGTGC-CAACACTCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGCacaaccccttaaagtatatc-tg-attattgtccccattttaacacgaggaaac-aagcacagacaggtttagttacccatccaggggcacacagtgagcactggcagagctaacgtatttttctc--cag-----tctgactccagggctgggcctctagcc-agggta i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 21828 333 - 21531802 TGTCTGAATCTCCCTGCGCCATGAG---------------------------CGCTGAGCCT-CCT--CTGACCTCCTCAGC-----------------------------------CT--CAGCAGCACCGGA--TCATGACATCCCGACTC-C-TTCCCAGCTCTC------------CCTGGGATAGTCTCTCAAACAATGAGTGC-CAACACTCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGCacaaccccttaaagtatatc-tg-attattgtccccattttaacacgaggaaat-aagcacagacaggcttagttacctgtccaggggcacacagtgagcactggcagagctaatgtgtttttccc--cag-----tctgactccagggctgggcctctagcc-agggta i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 41765 333 - 2515279 TGTCTGAATCTCCCTGCGCCGTGAG---------------------------CGCTGGGCCT-CCT--CTGACCTCCTCAGC-----------------------------------CT--CAGCAGCACCGGA--TCATGacatcccgactc-c-ttcccagctctc------------cctgggatagtctctcaaacaatgagtgc-caacactccttgactccagctctgtttcttgtgtaattcaaaataagCacaactccttaaagtatatc-tg-attattgtccccattttaacacgaggaaac-aagcacagacaggtttagttacccgtccaggggcacacagtgagcactggcagagctaacatatttttctc--cag-----tctgactccagggctgggcctctagcc-agggta i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146565978 354 - 204313951 TCACTGAATCCCCCTGTGCTGTGAGTGCTGGCACCCAAGA------GGGTTCTGCTGGACCT-CCT--CTGGCCTTGTCAGG-----------------------------------CT--CAGCAGCACCTGA--TCATGACATCCTGACTA-A-TTCCCAGCTCTT------------CCTGGGATAGTCTCTCAAATTATTAGTGC-CAACAATCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGcacaaacccttaaagtatagg-tg-attatcatctccattttaacacaaggaaac-aagcacagacagctgtagttacctgtccaggagcacacagtgagcactggcagagccgacatacttttccc--cag-----tctgactccagagCTGGGCCTCCAATG-TGGGTA i calJac3.chr2 C 0 I 2 s cebCap1.NW_016107703v1 403160 353 - 2125214 TCACTGAATCCCCCTGTGCCGTGAGTGCTGGCCCCCAAAA------GGGTTCTGCTGGACCT-CCA--CTGGCCTTGTCA-G-----------------------------------CT--CAGTAGCACCTGA--TCATGACATACTGACTC-A-TTCCCAGCTCTT------------CCTGGGATAGTCTCTCAAATGATTAGTGC-CAACAATCCTTGACTCCAGCTCTGTTTCTTGTGTAATTCAAAATAAGCacaaccccttaaagtataag-tg-attattgtccccattttaacacaaggaaac-aagcacagacagctgtagttacccatctaggagcacacagagagcactggcagagcaaacatacttttcct--cag-----tctgactccagagctaggcctccagcc-agggta i cebCap1.NW_016107703v1 C 0 I 133 s otoGar3.GL873611 2110224 350 - 8137123 CACCTCTGGCCCTCAGCGCTCTGAAAGCTGACCCCTGGGGCTGGACTGAATGCTGTGGGCCC-TGTGACTGCCCTCCTCGGG-----------------------------------CTCACAGCAACAGCTGG--ATCTCACATACTGACTC-AGTTCCTGGCTCCT------------CCTGGCATCATCTCTGAAATGATCAGTGC-CAACGATTCATGACTACAGCTCTGTT--TGGTGTAATCCCAAATAAATAC-------------ATATG-TGAattatgctcctcattttaacatgagagaac-aagtgcagacaggtagagttacctgcccaagaccacacagcgagcacaggcagggttggtggttttgccctgacag-----tctgactccagagctgggccttcaggc-acG--- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60963187 382 - 77573801 tctCCAAAA-TCCCAGCTGCACAAGTGCTGGCCCCCAGAG------------GGCTGGCCTTGGCT--CATGGCTCTCCAGGGACTGACCCCTAGGAATgcagtagccttgatgacact--ttgtaacatgggatttccttgcattctgtctctc-ctccctgctctctcctgcctgcctcctgggatcacctcttaaatgattactatgcaaaaacctttgactccagctc-----------CAAATCTACATAAGC------CATTGGTGTATTTTGTG-atgattttctccattctaccatcaggaagctgaggat---cagatgtagtta-ctgccccaggccacacagtgaatgttagcagggccctca---ttttggc--caatactctctgactctggatcagagcctttggcc-atggca i canFam3.chr6 I 2685 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I a score=65115.000000 s hg38.chr7_KI270899v1_alt 49452 17 + 190869 ccacacGCG--G-----TGCAACG s panTro5.chrUn_NW_015974890v1 1170 21 - 15765 CCACACGCG--GGCTAATGC-ATG i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 10189 17 - 432965 ccacacACA--G-----TGCAACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 73444 19 + 85365473 CCGCACACACTG-----TGCAACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33915220 19 + 185818997 ccacacACACTG-----TGCAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33531189 19 + 192294377 ccacacACACTG-----TGCAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4292410 19 - 9440265 ccacacACACTG-----TGCAACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881929 19 - 21915920 ccacacACACTG-----TGCAACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 22161 19 - 21531802 ccacacACACTG-----TGCAACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 42098 19 - 2515279 ccacacACACTG-----TGCAACA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146566334 17 - 204313951 --CCACACACTG-----TGCAACA i calJac3.chr2 I 2 C 0 s otoGar3.GL873611 2110574 16 - 8137123 ---CATACCCCA-----TACAGCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60963569 18 - 77573801 ccacatgccCT------TGCAAGG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I e cebCap1.NW_016107703v1 403513 133 - 2125214 I a score=150055.000000 s hg38.chr7_KI270899v1_alt 49469 28 + 190869 CGGTGGGGACAAGGGTCTCT--TGTACAA-T s panTro5.chrUn_NW_015974890v1 1191 28 - 15765 CGGTGGGGACAAGGGTCTTT--GTTGCAA-T i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 10206 28 - 432965 CGGTGGGGACAAGGGTCTCT--TGTGCAA-T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 73463 27 + 85365473 CGGCGGGGACAA-GGTCTCT--TGTGCAA-T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33915239 28 + 185818997 CGGTGGGGACAAGGGTCTCT--TGTGCAA-T i rheMac8.chr3 C 0 I 12 s macFas5.chr3 33531208 29 + 192294377 CGGTGGGGACAAGGGTCTCT--TGTGCAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4292429 28 - 9440265 CGGTGGGGACAAGGGTCTCT--TGTGCAA-T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881948 28 - 21915920 CGGTGGGGACAAGGGTCTCT--TGTGCAA-T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 22180 28 - 21531802 CGGTGGGGACAAGGGTCTCT--TGTGCAA-T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 42117 28 - 2515279 CGGTGGGGACAAGGGTCTCT--TGTGCAA-T i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146566351 28 - 204313951 TGGTGGGAAGAAGGCTCTCT--CATGCAA-T i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 403646 28 - 2125214 CGGTGGGAACAAGGGTTTCT--TGTGCGG-T i cebCap1.NW_016107703v1 I 133 C 0 s otoGar3.GL873611 2110590 30 - 8137123 CAGTAGCAGCAAGGGACTCTTGTGTGCAG-T i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60963587 10 - 77573801 ------------------CA--TGTGAAG-T i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I a score=3782.000000 s hg38.chr7_KI270899v1_alt 49497 1 + 190869 G s panTro5.chrUn_NW_015974890v1 1219 1 - 15765 G i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 10234 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 73490 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33531237 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4292457 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881976 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 22208 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 42145 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146566379 1 - 204313951 G i calJac3.chr2 C 0 I 113 s cebCap1.NW_016107703v1 403674 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2110620 1 - 8137123 G i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60963597 1 - 77573801 A i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e rheMac8.chr3 33915267 12 + 185818997 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I a score=5005.000000 s hg38.chr7_KI270899v1_alt 49498 1 + 190869 T s panTro5.chrUn_NW_015974890v1 1220 1 - 15765 T i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 10235 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 73491 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33531238 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4292458 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16881977 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 22209 1 - 21531802 T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 42146 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 s otoGar3.GL873611 2110621 1 - 8137123 T i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60963598 1 - 77573801 T i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e rheMac8.chr3 33915267 12 + 185818997 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I e cebCap1.NW_016107703v1 403675 0 - 2125214 C e calJac3.chr2 146566380 113 - 204313951 I a score=37190.000000 s hg38.chr7_KI270899v1_alt 49499 8 + 190869 GAGGATGG s panTro5.chrUn_NW_015974890v1 1221 6 - 15765 GA--ATGG i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 10236 8 - 432965 GAAGATGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 73492 8 + 85365473 GAGGCTGG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33531239 8 + 192294377 AAGGATGG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4292459 8 - 9440265 AAGGATGG i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16881978 8 - 21915920 AAGGATGG i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 22210 8 - 21531802 AAGGATGG i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 42147 8 - 2515279 AAGGATGG i manLeu1.NW_012101810v1 C 0 I 1 s calJac3.chr2 146566493 8 - 204313951 GCGGATGG i calJac3.chr2 I 113 I 1 s cebCap1.NW_016107703v1 403675 8 - 2125214 GTGGATGG i cebCap1.NW_016107703v1 C 0 I 1 s otoGar3.GL873611 2110622 8 - 8137123 GGGGATGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60963599 8 - 77573801 GAGGATGG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e rheMac8.chr3 33915267 12 + 185818997 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I a score=607992.000000 s hg38.chr7_KI270899v1_alt 49507 550 + 190869 CT--GGGGTGAGCCAGGCCCAA--CACACA-GGCCACGTG--GAGAGGCCCAATGCGAGGCCACAAGCTGGGGCATCTCCAAGGAAGATCAGC--CCCAGACTC-CATCCCTG-TGCC-TCCTGGTCTTC--CCGGCCCTCCCCAGACACTCAAGGCATGG-GAAGGCT--GTGA-CTGACCATG-GCAGGCTGGGTG-CTG-----GGGGCCCAGGGCAGAGGTGGG-GGCTGTACCT-CCACA-CAGCCCCCA--TAGGCA---GCA-GCCTTGGAGATCTCTC-CCTTAGCAGAGGCAG-GGCTGTGTCCCTC---CCTACACACCCACACTTCTCTCTGGGCACAC-AGTGACTGGGCAGGCAGAG-G-GTC-TCTT---CCTCTTGCTGGCCATTCCTG--GTATTTCCCCAG-TGCCA---CT--CTC---CAAGCCTCTCTGCCTGGG---T-------------TTCAGAAGGGAGGATGGTGTTA--CCGCAGTCTG-GAG--GCCC----------------CTGTGCCAAGGTCTTTCAGGACCCATAG-GATC-ATCTTGGAGAAGAATCGTCTGTGCACACACA---GCCACAT---GGAGGCCAGATGACCCTGGG--TTCAAGAGATGCCTCTAGGGAT s panTro5.chrUn_NW_015974890v1 1227 586 - 15765 CTTGCGGGTGAGCCAGGGCCAA--CACACATGGCCACG-G--GAGAGGCCCAATGCGAGG-CACAAGCT-GGGCATCTCCAAGAAAGATCAGCG-CCCAGACTCACATCCCTGATGCCTTCCTGGTTCTCTTCCAGCCCTCCCCCAGAACTCAAGGCATGGAGAAGGCTCGCTGACCTGACCATGCGCAGGTGGGTTG-CTGCTACCGGGGCCCAGGGCAGAGGTTGG-GGCTGTACCTACCACACCAGCCCCC----AAGCA---GTGCGCTTAGGAGATCTCTCACCTTAGCAGCGGCAGCGGCTG-GTCCTCC---CCTACACACCCACACTTCTCTCT-GGCACACTAGTGACTCGGCAGGCAGAGCG-GTCTTCTT--GCCTCTTGC-GGCCA-TCCTGACGTATTTCCCCAG-TGCCA---CT--CTC---CAAGCCTCCTTGCCTGCGGCTC-------------TTCAGAAGGGGCGATGGTGTTAACTCGCAGTCTGTGAAGCGCCC----------------CTGT-CCAAGGTCTTTCAGGACCCATAGCGATCGATCGTTGAGAAGAATCGTCTGTGCACACACAC--GCCACATTCGAGAGGCCAGATGACCCCGGGCCTTCAAGAGATGCTCTCACGGAT i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 10244 550 - 432965 CT--GGGGTGAGCCAGGCCCAA--CACACA-GGCCACGTG--GAGAGGCCCAATGCGAGGCCACAAGCTGGGGCATCTCCAAGGAAGATCAGC--CCAAGACTC-CATCCCTG-TGCC-TCCTGGTCTTC--CCAGCCCTCCCCAGACACTCAAGGCATGG-GAAGGCT--GTGA-CTGACCATG-GCAGGCTGGGTG-CTG-----GGGGCCCAGGGCAGAGGTGGG-GGCTGTACCT-CCACA-CAGCCCCCA--TAGGCA---GTG-GCCTTGGACATCTCTC-CCTTAGCAGCGGCAG-GGCTGTGTCCCTC---CCTACACACCCACACTTCTCTCTGGGCACAC-AGTGACTGGGCAGGCAGAG-G-GTC-TCTT---CCTCTTGCTGGCCATTCGTG--GTATTTCCCCAG-TGCCA---CT--CTC---CGAGCCTCTCTGCCTGGG---T-------------TTCAGAAGGGAGGATGGTGTTA--CCGCAGTCTG-GAG--GCCC----------------CTGTGCCAAGGTCTTTCAGGACCCATAG-GATC-ATCTTGGAGAAGAATCGTCTGTGCACACACA---GCCACAT---GGAGGCCAGATGACCCTGGG--TTCAAGAGATGCCTGTAGGGAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 73500 545 + 85365473 GT--GGGGTGAGCCAGGCCCGA--CACACA-GGCCACGTG--GAGAGGCCCAATGTGAGGCCAGAAGCAGGGGCATCTCCAAGGAAGATCAGC--CCCAGGCTG-CATCCCTG-CGCC-TCCTGGTCTCC--CCAGCCCTCCCCAGACAGGCAAGGCATGG-GAAGGCT--ACGA-CTGACCACG-GCAGGCTGGGTG-CTG-----GGGGCCCAGGGAAGAGGTGGG-GGCTGTACCT-CCACG-CAGCCCCC---TAGGCG---GTG-GCCTTGGAGA-------TCTCAGCAGCAGCAG-GGCTGTGTCCCTC---CCTGCACACCCACACTTCTCTCTGGGCACGT-GGTGCCTGGGCAGGCAGAG-G-GTC-TCTT---CCTCTTGCTGGCCACTCCTG--GTGTTTCCCCAG-TGCCACTCCT--CTC---CAAGCC-CTACGCCTGGG---T-------------TTCGGAAGGGAGGATGGCGTTA--CTGCAGTCTG-GAG--GCCC----------------CTGTGCCAAGGTCTTTCAGGACCCGTAG-GATC-ATCTTGGAGAAGAATCGTCTGTGCACACACA---GCCACAG---GGAGGCCAGATGACTCTGGG--TTCAAGAGATGCCTCTAGGGAT i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146566502 532 - 204313951 -T--AGGGTGAGCCGGGCCCAA--CATACA-AGCCACATG--GAGAGGACCAGTGTGAGGTCAGATGCTGGGGCATCTTCAAGGAAGATCAGC--------------------------CCCTGGTCTTC--CCAGTCCTTCCCAGACAGGCAAGACCCAG-GAAGGCT--GTGA-CTGACAATG-GCAGGCTGGGTG-CTG-----GGGGCCCAGGACAGATGTGGG-GGTTACACCT-CCACA-CAGCCCCCA--CCAGCA---GTG-GCCTTGGAGATCTCTA-CCTCCACAGTGGCAA-GGCTGTGTCCCTCCTTCTCTCACACCCACACTTCTCTCTGGTCACAC-AGTGGCTGGGCAGGCAGAG-G-GTC-TCT----CTCCTTGCTGGCCATTCCTG--GTGTTTCCCCAG-TGCCA---CT--CACCGCCAAGCTTCCCTCCCTGGG---T-------------TTCGAAAGGAAGCATGGTGTTA--CCGCAGTCTG-GAG--GCCC----------------CTGTCCCAAGGCCTCTCAGGACCTGTAG-GATC-ACCTTGAAGCAGAATCA-CTGTGCACACACA---GCCACGT---GCAGGCCAGATGACTCTGGG--TTCAAGAGATGCTTGTGGGGAG i calJac3.chr2 I 1 C 0 s cebCap1.NW_016107703v1 403684 530 - 2125214 -T--AGGGTGAGCCAGGCCCAA--CGTACA-AGCCACGTG--GAGAGGCCCAATGTGAGGCCAGACACTGGGGCATCTCCAAGGAAGATCAGC--------------------------CCCTGGTCTTC--CCAGTCCTTCCCAGACAGGCAAGACCCAG-GAAGGCT--GTGA-CTGATGATG-ACAGGCTGGATG-CTG-----GGGGCCCAGGACAGACATGGG-GGCTACACCT-CCACA-CAGCCACCA--CCAGCA---GTG-GCCTTGGAGATCTCTG-CCTCCACAGTGGCAG-GGCTGTGTCCCTC---CCCAGATGCCCACACTTCTCTCTGGGCACAC-AGTGGCTGGGCAGGCAGAG-G-GTC-TCT----CCCCTTGCTGGCCATTCATG--GTGTCTCCCCAG-TGCCA---CT--CACCTGCAAGTTTCTCTGCCTGGG---T-------------TTCAAAGGGAAGCATGGTGTTA--CCATAGTCTG-GAG--GCCC----------------CTGTCCCAAGGTCTCTCAGGACCTGTAG-GATC-ACCTTGAAGCAGAATCATTTGTGCGCACACA---GCCACGT---GCAGGCCAGATGACTCTGGG--TTCAAGAGATGCCTGTAGGGAG i cebCap1.NW_016107703v1 I 1 C 0 s otoGar3.GL873611 2110630 520 - 8137123 -----TGGTGAGCCCTGCCTGATGTGCACA-GGCCACATGGAGAGAGGCCCAAG--GAGTCTAGAGGCTGTGATATCTCCAAGGAAGACCAGTGCCACACGCTC-CATCCTTA-TGCC-TCCTGGTCATC--CCTACCCT------GAAGACAAGGCTCAG-GAAGGCT--GTGA-CCAAATGCA-GCAGTGTGAG-G-CTG-----AATGACC-----------------CTGTACCT-CCACA-CATACCCAAAGGCAGGA---GTG-GCCTTGGAGGCCTCCA-CCCCAGCAACAG-AG-GGCTATGTGCCTC---CCCACACACCCATGCTTCCTGCTGGGACCCA-AGGGGCTGAGCAGGCAGAG-GAGGC-TCTTACAGCCCTTGCTGGCTTTTCCTG--GTGTTTCCCCAG-TGCTG---GG--TAT-------------GGCCCAAG---C-------------TTC--AAGGGAGCGCTGTGTTG--CCACAGTC-A-GAG--GCCC----------------CTTTGCCAATGCCTCTCAAGACCTGTCG-GCTC-ACCTTGGAGCGGGATAGTGTGTGTACACACG---ACCATGC---AGAGGCCAGATGACTGTGGA--TTTGAGAGCTGCCTCTAGGGAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60963607 538 - 77573801 GT--GAGGTGAG-TGGGCCCAA--CAC-CG-GGCTGCACA--GAGAGGCCCCATGTGAGG-CAGAAACA-GGACATTTCTGTGGATGATCAGC--ATTGGGACC-TGCTCCCA-TGCT-TTCTGGTCTTC--CCATCCTTGGAC--ACAGGCAAGGTCCAG-GGAGGCC--CGGG-CAGGCCAgg---agcctgggagcctg-----ggagcctggAACACAGGTGTGCCCCTGCATCT-CCGCA-CAGCATCTA--CAGGCAGGGGTG-GCCTTGTCAGTCTCCATCCTCAGCA-CAGCAA-AGCCATGTCTCTT---CC--CATGCCCTTGCTTCTT--TGGATGGAT-GGTG---GGGCTGCCAAGG-A-ACC-----------ATTACCGGCTTTACCTA--GAGGCTTCCCAGATGCCA---TTACCTC---CATGCTGATTCCCCTGGG---TGGTAGGAACCTTAGCCAGGAGGGTGTGTTGTTTTG--CTA----CCA-GAG--GCTCCTTCCTCAATGGGGATCTGTGCTAAAGTC--TCAGGACACATGG-TATC-ATCT--GAGCTGAATGCACTGTGCAAGAGTAAGGGCCACTC---AAAGGCCAAA--ACTCTCAG--AT-------------------- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I e aotNan1.NW_018514293v1 24300 5806 + 376347 I a score=90622.000000 s hg38.chr7_KI270899v1_alt 50057 41 + 190869 GCATCA-ATCTCCAACGATTTCCCAGTCGTTTCAGAGCCAGG s panTro5.chrUn_NW_015974890v1 1813 40 - 15765 GCGTCATATCTCAACCGATTTCCCAGTCG-TTCAGAG-CAGG i panTro5.chrUn_NW_015974890v1 C 0 I 13 s gorGor5.CYUI01015914v1 10794 41 - 432965 GCATCA-ATCTCCAACGATTTCCCAGTCGTTTCAGAGCCAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 74045 41 + 85365473 GCATCA-ATCTCCAATGATTTCCCAGTCATTTCAGAGCCAAG i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146567034 41 - 204313951 GCATTA-ATCTCCAATGATTTCCCAGTCATTTCAGAGCCAAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 404214 41 - 2125214 GCATCA-ATCTCCAATTATTTCCCAGTCATTTCAGAGCCAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 30106 41 + 376347 GCATCA-ATCTCCAATGATTTCCCAGTCATTTCAGAGCCAAG i aotNan1.NW_018514293v1 I 5806 C 0 s otoGar3.GL873611 2111150 41 - 8137123 GAATCA-ACCTCCAATGATTTCCCGATCATTTCTGAGCCAAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60964145 40 - 77573801 GCATAA-ACTTCCAATG-CCTCACGATCATTGCTGAGCTGAG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=11157.000000 s hg38.chr7_KI270899v1_alt 50098 9 + 190869 ATGAGAATC----- s gorGor5.CYUI01015914v1 10835 9 - 432965 ATGAGAATC----- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 74086 9 + 85365473 ATGAGAATC----- i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146567075 9 - 204313951 ATGAGAATA----- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 404255 9 - 2125214 ATGAGAATA----- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 30147 9 + 376347 ATGAGAATA----- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2111191 9 - 8137123 ATGAGAATC----- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60964185 11 - 77573801 ---AGGCTTCAGCT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I e panTro5.chrUn_NW_015974890v1 1853 13 - 15765 I a score=732798.000000 s hg38.chr7_KI270899v1_alt 50107 399 + 190869 CAAATGCTTGTTTACTGCAGTGA-GCTTTCAGTTTAG-TTTCTTATTA--AATATAACTA--TGCATAA---TAGGCAACC--CCATTCCCACA-CCAAAG-CTGCAAGCATATTGCAA-GTACCAGTTTATCTGTTGGGTAGGCAGAGG-CGT-TTAGC-AGCAT-CATT-TCAGAAGC--GGAAGGAGAGT-------TTCCC-CA-CACTATCCT-GCAGGAA--GCTTGGCAGAAGCCCAGATG-CACATCCTGGATGC-TGCCCAGCATCATGGCAGGAAAAC--GGGTTCAGAGC-CACAGGCTGAGGCCTGGGG-----GACTTCACAGACAACTAG-GACAGTTC-TGACA-TTTGCTTCCCTCTTGACCACCTGCTTTGCCTGCTTTGCAAGGATGGACAGAGAACAGCACTAACATGCATGAAAATGAACCACAC s panTro5.chrUn_NW_015974890v1 1866 425 - 15765 CAAATGCTTGTTTACTGCAGTGACGCTTTCAGTTTAGTTTTCTTAT----ATCATAACTA--TGCATAATTTTAGGCAACCCACAATTCCAACACCCAAAGCCTGCAAG-AT-TTGCAAGGTACCAGTTTATCTGTTGGGTAGGCAGAGGACGTCTCAGCAAGCATCCATTCTCAGAAGTCAGGAAGGAGAGT-------TTCCCTCACCACTATCCTGGCAGACACTGATTTGCAGAAGCCACGATGCCACATCCTGGATGC-TGCCCGGCATC-TGGCAGGAAAAC--GGGTTCAGAGCTCACAGGCTGAGGCCTGGGGCCTCCGACTCCACAGACAACTAGTGACAGTTCATGACA-TTTGCTTCCCTCTTGACCACCTGCTTTGCCTGCTTTGCAAGGATGGACAGAGAACAGCACTAACATGCATGAAAATGAACCACAC i panTro5.chrUn_NW_015974890v1 I 13 C 0 s gorGor5.CYUI01015914v1 10844 399 - 432965 CAAATGCTTGTTTACTGCAGTGA-GCTTTCAGTTTAG-TTTCTTATTA--AATATAACTA--TGCGTAA---TAGGCAACC--CCATTCCCACA-CCAAAG-CTGCAAGCATATTGCAA-GTACCAGTTTATCTGTTGGGTGGGCAGAGG-CGT-TTAGC-AGCAT-CATT-TTAGAAGT--GGAAGGAGAGT-------TTCCC-CA-CACTGTCCT-GCAGGAA--GCTTGGCAGAAGCCCAGATG-CACATCCTGGATGC-TGCCCAGCATCATGGCAGGAAAAC--GGGTTCAGAGC-CACAGGCTGAGGCCTGGGG-----GACTCCACAGACAACTAG-GGCAGTTC-TGACA-TTTGCTTCCCTCTTCACCACCTGCTTTGCCTGCTTTGCAAAGATGGACAGAGAACAGCACTAACACGCATGAAAATGAACCACAC i gorGor5.CYUI01015914v1 C 0 I 180 s nomLeu3.chr20 74095 389 + 85365473 CAAATGCTTGTTTACTGCAGTGA-GCTTTCAGTTTAG-TTTCTTATTA--AATATAACTA--TGCATGA---TAGGCAACC--CCATTCCCACT-CCAAAG-CTGCAAGCATATTGCAA-GTACCAGTTTATCTGTTGGGTAGGCAGAGG-CGT-TTAGC-AGCAT-CATT-TCAGAAGT--GGAAGGAGAGT-------TTTCCCCA-CACTGTCCT-GCAGGAA--GCTTGGCAG-AGCCCAGATG-CACTTCCTGGATGC-TGCCCAGCATCATGGCA-GAGAAC--GGGTTCAGAGG-CACAGGCTGAGGCCTGGGG-----GACTCCACAGACAACTAG-GACAGCTC-TGACG-TTTGCTTCCCTCTTGCCCA---------CCTGCTTTGCAAGGATGCACAGAGGACAGCAGTAACATGCATGAAAATGAACCACAC i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146567084 384 - 204313951 CAAATGTTTGTTTATTTCAACGA-GCTTTCAGTTTCA-TTTCTTATTA--GGTATAATTA--TGTATTA---TAGGCAAC---CCATTCCCACT-CAAAAG-CTGCAAGCATATTTCAA-GTACCAGTTTATCTACTGGGTAGGCAGAGG-CAT-TTAGC-AGCAT-CATT-TCAGAAGT--GGAAGGAGAGT-------TTTCCCCA-CAATGTCCT-GCAGGAA--GCTTGATTAAAGCCCAGATG-CACTTCCTGGATGC-TGCCCGGCCTCATGGCAGGAAAACTGGGGTTGAGAGC-CACGGGCTGAGGCCTGGGG-----ATATCCACAGACAACTAG-GACAGCTC-TAACGTTTTTTTTCCCTCATGCCCG---------CCTGCTTTGCACAGATGGACAGAGAATAGCAATAACATGCATGAAAAC--------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 404264 389 - 2125214 CAAATGTTTGTTTATTTCAACAA-GCTTTCAGTTTCA-TTTCTTATTA--GATATAATTA--TGTATTA---CAGGCAAC---CCATTCCCGCT-CAAAAG-CTGCAAACATATTGCAA-GTACCAGTTTATCTACTGGGTAGGCAGAGG-CGT-TTAGC-AGCAT-CATT-TCAGAAGT--GGAAGGAGAAT-------TTTCCCCA-CACTGTCCT-GCAGGAA--GCTTGGCCAAAGCCCAGATG-TACTTCCTGGATGC-TGCCCAGCCTCATGGCAGGAAAACCGGGGTTGAGAGC-CACGGGCTGAGGCCTGGGG-----GTCTCCACA---AACTAG-CACAGCTC-TAACG-TTTCTTTCCCTCTTGCCCG---------CCTGCTTTGCACGGATGGACAGAGAATAGCAGTAACATGCATGAAAATGAACCACAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 30156 393 + 376347 CAAATGTTTGTTCATTTCAATGA-GCTTTCAGTTCAG-TTTCTTATTA--GATATAATTG--TGTATTA---TAGGCAAT---CCATTCCCGCT-CAAAAG-CTGCAAGCATATTGCAA-GTACCCGTTTATCTACTGGGTAGGCAGAGG-CGT-TTAGC-AGCAT-CATT-TCAGAAGT--GGAAGGAGAGT-------TTTCCCCA-CACTGTCCT-GCAGGAA--GCTTGACCAAAGCCCAGATG-TACTTCCTGGATGCTTGCCCGGCCTCATGGCAGGAAAACTGGGGTTGAGGGC-CACGGGCTGAGGCCTGGGG-----GTCTCCACAGACAACTAG-AACAGCTC-TAACG-TTTCTTTCCCTCTTGCCCG---------CCCGCTTTGCGCGGATGGACAGAGAATAGCAGTAACATGCATGGAAATGAACCATAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2111200 379 - 8137123 CAAATACTCATT------------TCATGTAGTTTAG-TTTCTTATTA--AATATAACTA--TGCATTA---CAGGCAGCC--CCATTCCTCCT-TAAAAG-CTGAGAGTGTGCTGCAT-GTACCAGTTTATCT-CTGGGTGGGCAAAGG-GGT-TTAGC-AGAAT-TATT-TCAGAAAT--GGAAGGAAAAT-------TTTCCCTA-TACCATCCC-ACAGGAA--GCTTGGATGAAGCCCGAATG-CACTTCATGAATGT-TACACAGCCTCACAGAAGAAAGGTTGGGGCTGGGAGC-TGCAGGCTCAGTCT--GGG-----GTCTCTGCAGACAATTAA-GAGGGCTC-TCACG-TTCATTTTCCCCCTGCCCA---------CTTGCTTTGCAAGGATGGGCAGAGTATAGCAGCAACATGCTTGAAAATAAGTTACGT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60964196 395 - 77573801 CAATTTCTTATTACTAGTGCTTA---TGTAAGTATCA-TATCTTATGACTAATGCAAATAACTGTATTG---CAGTCAAACC-CCATTTGTATT-ACAAGG-GCCAAAGTTTGTTGCCA-GGACCAGTTTACCTGCT-GGTGGGT-GAGG-GGT-TTAGC-AGAAA-CATT-TCAGAAAC--ACAAGCAAAGTGTGTTTCTTTCCACA-CACCATCCT-GAAGGAA--GCTCCATAGAAGCCTGGATG-CACACCAAATATAT-TGCACATCATCATGGGATGAAAACCAGGGATGAGAGC---GAGGCTCAGCCTAGGGG-----GTCTCTGCAGACAGATGA-CCCAGCTC---GCA-ATTGTTTCCATCTTGCACT---------CCTGCTTTGCAAGGATAAGAAGAGGGCAACCACAATGTGCATGAAGATGTGTCAC-- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=386138.000000 s hg38.chr7_KI270899v1_alt 50506 203 + 190869 CCTGTGGTGGTGTCCCACTTAGCTGGTGG-------GGTCTACGGTGA--------------------------------------------------------------------------------------------GAGAATCGGC--------------ATGTATGT-------------------------------------------------------------------------------------GTCCTGGGCCA-GCAGCTGTCCTCAGGATGGA--------------------------------------------------------CACTGAGGTCAGGTCCAGAGCAACTAA-TTGATGTCAGATCTGTGAGTTGCCTCTGATCA-G-CCAA-TCTGAGTAGCATGTTTATTAGAACATTTTTGCATTTGGGGGAACCAGAA s panTro5.chrUn_NW_015974890v1 2291 203 - 15765 CCTGTGGTGGTGTCCCACTTAGCTGGTGG-------GGTCTACAGTGA--------------------------------------------------------------------------------------------GAGAATTGGC--------------ATGTATGT-------------------------------------------------------------------------------------GTCCTCGACCA-GCAGCTGTCCTCAGGATGGA--------------------------------------------------------CACTGAGGTCAGGTCCAGAGCAACTAA-TTGATGTCAGATCTGTGAGTTGCCTCTGATCA-G-CCAA-TCTGAGTAGCATGTTTATTAGAACATTTTTGCATTTGGGGGAACCAGAA i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 11423 203 - 432965 CCTGTGGTGGTGTCCCACGTAGCTGGTGG-------GGTCCACGGTGA--------------------------------------------------------------------------------------------GAGAATCGGC--------------ATGTATGC-------------------------------------------------------------------------------------GTCCTGGGCCA-GCAGCTGTCCTCAGGATGGA--------------------------------------------------------CACTGAGGTCAGGTCCAGAGCAACTAA-TTGATGTCAGCTCTGTGAGTTGCCTCTGACCA-G-CCAA-TCTGGGTAGCATGTTTATTAGAACATCTTCGCATTTGGGGGAACCGGAA i gorGor5.CYUI01015914v1 I 180 C 0 s nomLeu3.chr20 74484 203 + 85365473 CCTGTGCTGGCGTCCCACTTAGCTGGTGG-------GGTCTACGGTGA--------------------------------------------------------------------------------------------GAGAATTGGC--------------ATGTATGT-------------------------------------------------------------------------------------GTCCTGGGCCA-GCAGCTGTCCTCAGCATGGA--------------------------------------------------------CACTGAGCTCAGGTCCAGAGCAGCTAA-TTGATGTCAGCTCTGTGAGTTGCCTCTGACCA-G-CCAA-TCTGAGCAGCATGTTCATTAGAACATCTTTGCATTTGGGGGGACCAGAA i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146567468 195 - 204313951 ---------GAGCCCCACTTAGCTGGTGG-------GGCCCAGGGTGG--------------------------------------------------------------------------------------------GAGAATTGGC--------------ATGTATGT-------------------------------------------------------------------------------------GTCATGGGCCA-GCAGCTGTCCTCGGGATGGA--------------------------------------------------------CACTGAGCTCAGTTCCAGGGCAGCTAA-TTGATGTCAGGGCTGTGAATCGCCTCTGATCA-G-CCAACTCTGAGCAGCATGTTTATTAGAACATCTTAGCATTAGGAGGAACCAGAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 404653 203 - 2125214 CCTGCGGTGGAGCCCCACTTAGCTGGCGG-------GGTCCAGGGTGG--------------------------------------------------------------------------------------------GAGAATTGGC--------------ATGTATGT-------------------------------------------------------------------------------------GTCCTGGGCCA--CAGCTATCCTCGGGATGGA--------------------------------------------------------CACTGAGCTCAGTTCCAGGGCAGCTAA-TTGACGTCAGCTCTGTGAATCGCCTCTGACCA-G-CCAACTCTGAGCAGCATGTTTATTAGAACATCTCAGCATTTGGAGGAACCAGAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 30549 204 + 376347 CCTGCGGTGGAGCCCCACTTAGCTGGCGG-------GGTCCAGGGTGG--------------------------------------------------------------------------------------------GAGAATTGGC--------------ATGTATGT-------------------------------------------------------------------------------------GTCCTGGGCCA-GCAGCTGCCCTCGGGATGGA--------------------------------------------------------CACTGAGCTCAGTTCCAGGGCAGCTAA-TTGATGTCAGCTCTGTGAATCACCTCTGACCA-G-CCAACTCTGAGCAGCATGTTTATTAGACCATCTTAGCATTTGCAGGAACCAGAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2111579 212 - 8137123 ACTGTGGCCAAGCCCTTTTCAGCTGGTGGGGGGCGTGGTCCAGGGCCA--------------------------------------------------------------------------------------------GAGAATTGGT--------------GTGCATGT-------------------------------------------------------------------------------------CTCATGCATCA-ACAGGAGACCTTAGAATGGA--------------------------------------------------------CACTGAGCTTGGGTCCAGGGCAGCTACTTTGATGTCAGCTCTGCAAATTGCTTCTGCCCAGG-CCAACTGTGAGTGATGTGCCT-TTGGAGCATCTTTGCATTGGGGGGAGCCAGAC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60964591 453 - 77573801 CCTATGGCTGAGCTCTGCTTAGCTGGAGG-------TGTCCAGGGTCACCTTCTGGCCTGGCATGGCCctggggatagtactgcgggtcagacaggatccctgctcccagaccatgctgctgggagaagccagatatttggagattcggttatactctgggatgatgaatgccacggatatggatatagactgaagtattaagggtgcttgtggcaggaggggacgcctgaatggcttagggCTGTGGGTTCTAACAGTGCTGGGCTATACAGATAGACCCAGGAGAGGCAGGACCAGTCCCTGATGCTTTTTTCTGCCTGCCTTTGAATCAAGTCCAGATGTCCCACTAAGCCCAGTTCCAGGGCAGCTGCTTTGATGTGAGCTCTGCAAATTACATCTGCCTA-GACCAACACTGAGCACCGTGTTTA-CAGAACCTCTTTGCATTTAGGGAAACCAGCG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 201008 12 + 6586416 I e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=109135.000000 s hg38.chr7_KI270899v1_alt 50709 32 + 190869 GTGAGCTGATCTGCATATAGGCCAGCCTTTCT s panTro5.chrUn_NW_015974890v1 2494 32 - 15765 GTGAGCTGATCTGCATATAGGCCAGCCTTTCT i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 11626 32 - 432965 GTGAGCTGATCTGCATATAGGCCAGCCTTTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 74687 32 + 85365473 GTGAGCTGATCTGCATATAGGCCAGCCTCTCT i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 201020 32 + 6586416 GTGAGCTGGTCTGCACGTAGGCCAGCCTCTCT i colAng1.NW_012117710v1 I 12 C 0 s calJac3.chr2 146567663 32 - 204313951 ATGAGCTGATCTGCTTATAGGCCAGCCTTTCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 404856 32 - 2125214 ATGAGCTGATCTGTGTATAGGCCAGGCTTCCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 30753 32 + 376347 ATGAGCTGATCTGCGTGTAGGCCAGGCTTTCT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2111791 32 - 8137123 ATGAGCTGGTCTGGATAGAGGCCAGCCTTTCT i otoGar3.GL873611 C 0 I 254 s canFam3.chr6 60965044 32 - 77573801 GTGAGTAGATCTGCACATGGGCCAGCCTTTCT i canFam3.chr6 C 0 C 0 e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=274047.000000 s hg38.chr7_KI270899v1_alt 50741 114 + 190869 GCATAGGGCACAGCGTATGTGCAGGCAGGCTAGCTTATGTACAAACAGCCCACTATGTGTG-ACGTGGAACAGTCACTCTGCAAATAGAGCAGCTGTCCCCACATGGGCTACTAC s panTro5.chrUn_NW_015974890v1 2526 114 - 15765 GCATAGGGCACAGCGTATGTGCAGGCAGGCTAGCTTATGTACACACAGCCCACTATGTGCG-ACGTGGAACAGTCACTCTGCAAATAGAGCAGCTGTCCCCACATGGGCTACTAC i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 11658 114 - 432965 GCATAGGGCACAGCGTATGTGCAGGCAGGCCAGCTTATGTACAAACAGCCCACTATGTGTG-ACGTGGAACAGTCACTCTGCAAATAGAGCAGCTGTCCCCACATGGGCTACTAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 74719 95 + 85365473 GCATAGGGCAC--------------------AGCTTATGTACAAAGAGCCCATTATGTGTGCACATGGAACAGTCACTCTGCAAATAGAGCAGCTGTCCCCACATGGGCCACTGC i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 201052 112 + 6586416 GCACAGAGCACAGCTTGTGTGCAGGCAGGCCAGC-TATGTACAAAGAGCCCACTGTGTGC--ACGTGGAACAGTCATTCCGCAGACAGAGCCGCTGTCCCCACGTGGGCCACTAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146567695 108 - 204313951 GCATAGCTCAT-------GGGCAGACAGTCCAGCTTATGTACAAAAAGCCCACTGTGTGTGCACGTGGAACAGTCATTCTGCAAATAGAGCAGCTGTCCCCACGTGGGCCACTAC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 404888 108 - 2125214 GCATAGCTCAC-------GGGCAGACAGTCCAACTTATGTACAAAGAGCCCACTGCGTGTGCACATGGAACAGTCATTCTGCAAATAGAGCAGCTGTCCCCACATGGGCCACTAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 30785 108 + 376347 GCATAGCTCAT-------GGGCAGACAGTCCAGCTTATGTACAAAGAGCCCACTGTGTGTGCACGTGGAGCAGTCATTCTGCAAAGAGAGCAGCTGTCCCCACATGGGCCGTTAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2112077 112 - 8137123 GTATAGAACCTAGCCTGTGTACAAACAGAC--GTTTATCAACAAAGAGCCCACCTAGATTC-ACATCGAACAGTCTTTCTACAAATGCAGCAGCTGTCCCCACATGGGTCACTAC i otoGar3.GL873611 I 254 C 0 s canFam3.chr6 60965076 103 - 77573801 -GTCAGCTTAC-------GTGCAGATAGGCCAGCTTATCCACAAAGAAGCCATTTTATCTGCTCAAGGAACAG----TCTGCAAATAAAACAGCTGCCTGCATATGGGCCACGAG i canFam3.chr6 C 0 C 0 e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=23178.000000 s hg38.chr7_KI270899v1_alt 50855 9 + 190869 TTAGACcaa s panTro5.chrUn_NW_015974890v1 2640 9 - 15765 TTAGACcaa i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 11772 9 - 432965 TTAAACcaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 74814 9 + 85365473 TTAGACcaa i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 201164 9 + 6586416 TCAGACcaa i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146567803 9 - 204313951 TTAGACcaa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 404996 9 - 2125214 TTAGACTaa i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 30893 9 + 376347 TTAGACcaa i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 60965179 9 - 77573801 CTAGACACA i canFam3.chr6 C 0 I 603 e otoGar3.GL873611 2112189 0 - 8137123 C e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=172377.000000 s hg38.chr7_KI270899v1_alt 50864 88 + 190869 gcttctccaacctgcagtctgcgggctgcgtgaagccagacacagcttcgaatgggacccaacacaaaatcgtcacatttcttaaaac s panTro5.chrUn_NW_015974890v1 2649 88 - 15765 gcttctccaacctgcagtctgcgggctgcgtgaagccagacacagcttccaatgggacccaacacaaaatcgtaacatttcttaaaac i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 11781 88 - 432965 gcttctccaacctgcagtctgcgggctgcgtgaagccagacacagcttcgaatgggacccaacacaaaatcgtaacatttcttaaaac i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 74823 87 + 85365473 gcttctccaacctgcagtctgc-ggctgcatgaagccagatgcagcttcgaatgggacccaacacaaaatcgtaacatttcttaaaac i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 201173 75 + 6586416 gcttctccaacctgcagcctgcgggctgcatgaagccagacacggctttgaatgggaccccacacaaaaccgtaa------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146567812 88 - 204313951 gtttctccaacctgcagcctgtgggaagcatgcggccaggcatggctttgaatggggcccaacatgaaattgcaaactttcttaaaac i calJac3.chr2 C 0 I 2 s cebCap1.NW_016107703v1 405005 88 - 2125214 gcttctccaacctgcagcctgcgggctgcatgcggccaggcatggctttgaatgaggcccaacacataattgcaaactttcttaaaac i cebCap1.NW_016107703v1 C 0 I 77 s aotNan1.NW_018514293v1 30902 88 + 376347 gcttctccaacctgcagcctgcgggctgcatgcggccaggcatggctttgaatggggcccaacatgaaactgcaaactttcttaaaac i aotNan1.NW_018514293v1 C 0 I 2 e otoGar3.GL873611 2112189 0 - 8137123 C e canFam3.chr6 60965188 603 - 77573801 I e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=103161.000000 s hg38.chr7_KI270899v1_alt 50952 76 + 190869 tatgagaatttcttcacg------atttttttagctcatcatcagctatcattagtgttaatgtattttatgtgtggctaaa s panTro5.chrUn_NW_015974890v1 2737 76 - 15765 tatgagaatttcttcacg------atttttttagctcatcatcagctatcattagtgttaatgtattttatgtgtggctaaa i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 11869 76 - 432965 tatgagaatttcttcacg------atttttttagctcatcatcagctatcattagtgttaatgtattttatgtgtggctaaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 74910 76 + 85365473 tgtgagactttcttcacg------attgttttagctcatcatcagctatcattagtgttcatgtattttatgtgtggtcaaa i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 201248 70 + 6586416 ------aatttcttcacg------atttttttagctcatcatcagctatcattagtgttagcatattttacttgtggccaaa i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146567902 79 - 204313951 gatgagattttctttgcattttctttttttttagc---tcatcagctaccattagtgttagtgtgttttatgtgtggcccag i calJac3.chr2 I 2 I 2 s aotNan1.NW_018514293v1 30992 79 + 376347 gatgagatattctttgcgttttctttttttttagc---tcatcggctaccattagcgttagtgtgttttatgtgtggcccag i aotNan1.NW_018514293v1 I 2 I 2 e otoGar3.GL873611 2112189 0 - 8137123 C e canFam3.chr6 60965188 603 - 77573801 I e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I e cebCap1.NW_016107703v1 405093 77 - 2125214 I a score=113567.000000 s hg38.chr7_KI270899v1_alt 51028 55 + 190869 gaca---cttcttcttccaatgtggctcagggaagccacaagattggacacccctgAT s panTro5.chrUn_NW_015974890v1 2813 55 - 15765 gaca---cttcttcttccaatgtggctcagggaagccacaagattggacacccctgAT i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 11945 55 - 432965 gaca---cttcttcttccaatgtggctcagggaagccacaagattggacacccctgAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 74986 58 + 85365473 gacaattcttcttcttccaatgcggctcagggaagccaaaagattggacacccctgAT i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 201318 58 + 6586416 gacaattcttcttcttccaatgtggctcagggaagccaaaagattggacacccccgAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146567983 55 - 204313951 gatt---cctcttcttccagtgtggccccggaaagccaaaagattggagaaccctgAT i calJac3.chr2 I 2 C 0 s cebCap1.NW_016107703v1 405170 55 - 2125214 gatt---cctcttcttccaatgtggccccgggaagccaaaagattgaagaccactgAT i cebCap1.NW_016107703v1 I 77 C 0 s aotNan1.NW_018514293v1 31073 55 + 376347 gatt---cctcttcatccagtgtggccccgggaagccaaaagattggagacccctgAT i aotNan1.NW_018514293v1 I 2 C 0 e otoGar3.GL873611 2112189 0 - 8137123 C e canFam3.chr6 60965188 603 - 77573801 I e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=578981.000000 s hg38.chr7_KI270899v1_alt 51083 238 + 190869 CTAGATGCAAGATGCTATTTTGGAAGATGGTGTTAGTGATAATTATTTCAATCCCTGGCAGGGGG------GCCCTGAACAAGCTACTCCTCTCAGAGTTCCTGCAGTCTTCCTGGGGGTGGCACCTTCAGCT-------TGTTCTGTGCCCAT--------CAGCGTTATCAGCCCAGTGCTTGGGCACCTGGAAGGCATCTCCTGTTCATTCCCGGCTGCCAGGGTGACAGAGGCTTGtgtttt-gcgatgtaccgat s panTro5.chrUn_NW_015974890v1 2868 238 - 15765 CTAGATGCAAGATGCTATTTTGGAAGATGGTGTTAGTGGTAATTATTTCAATCCCTGGCAGGGGG------GCCCTGAACAAGCTACTCCTCTCAGAGTTCCTGCAGTCTTTGTGGGGGTGGCACCTTCAGCT-------TGTTCTGTGCCCAT--------CAGCGTTATCAGCCCAGTGCTTGGGCACCTGGAAGGCATCTCCTGTTCATTCCAGGCTGCCAGGGTGACAGAGCCTTGtgtttt-gcgatgtaccgat i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 12000 236 - 432965 CTAGATGCAAGATGCTATTTTGGAAGACGGTGTTAGTGGTAATTATTTCAATCCCTGGCA-GGGG------TCCCTGAACAAGCTACTCCTCTCAGAGTTCCTGCAGTCTTCCT-GGGGTGGCACCTTCAGCT-------TGTTCTGTGCCCAT--------CAGTGTTATCAGCCCAGTGCTTGGGCACCTGGAAGGCATCTCCTGTTCATTCCAGGCTGCCAGGGTGACAGAGGCTTGtgtttt-gtgatgtaccgat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 75044 237 + 85365473 CTAGATGCAAGATACTATTTTGGAAGATGGTGTTAGTGATAATTATTTCAATCCCTGGCA-GGGG------GCCCTGAACATGCCACTCCTCTCAGAGTTCCTGCAGTCTTCCTGGGGGTGGCACCTTCAGCT-------TGTTCTGTGCCCAT--------CAGCATTATCAGCCCAGTGCTTGGGCACCTGTAAGGCATCTCCTGTTCATTCCAGGCTGCCAGGGTGACAGAGGCTTGtgtttt-acgatgtaccgag i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 201376 238 + 6586416 CTAGATGCAGGATGCTATTTTGGAAGATGGTGTTAGTGATAATTATTTCAATCCCTGGCCGGGGG------GCCCTGAACCTGCTACTCCTTTCAGGGTTCCTGCAGTCTTCCTGGGGCTGGCACCTTCAGCT-------TGTTCTGTGCCCAC--------CAGCGCCATCAGCCCAGTGCTTGGGCACCTGTAAGGCGTCTCCTGTTTATTCCAGGCTGCCAGGGTGACAGAGGCTTGtgtttt-aagacgtacggag i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146568038 237 - 204313951 CTAGATGCAAGATGCTATTTTGGAAGATGGTGTTAGTAATAATTATTTCAGTCCCTGCCCA-GGG------TTCCTGAACCTGCTTTTCCTTTCAGAGTTCCTGCAGTCTTCCTGGGACTGGCAGCTTCAGCT-------TGTTCTGTGCCCAC--------CAGCATTATCAGCCCAGTGCTTGGGTACCTGTAAGGCATCTCCTGTTCGTTCCTGGCTGCCAGGATGACAGAGGCTTGtggttt-atgatgtaccaag i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 405225 238 - 2125214 CTAGATACAAGACACTATTTTGGAAGATGGTGTTAGTAATAATCATTTCAGTCCCTGAGCAGGGG------GTCCTGAACCTGCTTTTCCTTTCAGAGTTCCTGCAGTCTTCCTGGGACTTGCAGCTTCAGCT-------TGTTCTGTGCCTAC--------CAGCGTTATCATCCCAGTGCTTAGGCACCTGTAAGGCATCTCCTGTTCATTCCCGGCTGCCAGGGCGACAGAGGCTTGtggttt-atgaagtaccaag i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 31128 237 + 376347 CTAGACTGAAGATGTTATTTTGGAAGATGGTGGTAGGAAGAATCATTTCAGTCCCTGTGAAGGGC------GTCCTGAACCTGCTTTTCCTTTCAGAGTTCCTATAGTCTTCCTGGGACTGGCAGCTTCAGCT-------TGTTCTGTGCCCAC--------CAGCATTATCAGCCCAGTGCTTGGGCACCTGTGAGGCATCTCCTGTTCATTCCTGGCTGCCAGGGTGAC-GAGGCTTGtggttt-acgacgtaccgtg i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2112189 250 - 8137123 CTAGATGTAAGATGTGATTTTGGAAGACGGTATTAGAGTTAGTGATTTCAATCTCTGGCTAAGGGAATCCTACACTACACATGGCCTTCTTCTCTGAGCTCCTGCAGTCTGTCC----CTCGCCCATTTCTCTCCTGGGCTGTCCTTTGCCCATTTCTTCAGTTGCTTTATGAGCCCAGGGCTTGGATACCTATAAGGCATCTCCTGTTCCTTCCAGGCTTCCAGGGTGACAGGGCCttgtgttttaatgatgt------ i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60965188 603 - 77573801 I e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=246660.000000 s hg38.chr7_KI270899v1_alt 51321 95 + 190869 ggtttattttaattaggtatgataagatgacaaacatggagacagctgtcttgaaaggagagtttattactt-aaggttcc-caagaggagggggca s panTro5.chrUn_NW_015974890v1 3106 97 - 15765 ggtttattttaattaggtatgataagatgacaaacatggagacagctgtcttgaaaggagagtttattacttaaaggttccgcaagagggaggggga i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 12236 94 - 432965 ggtttattttaattaggtatgataagatgacaaacatggagacagctgtcttgaaaggagagtttattactt-aaggttcc-caagagg-aggggca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 75281 95 + 85365473 ggtttattttaatcaggtatgataagatgacaaacatggagacaactgtcttgaaaggagagtttattattt-acggttcc-caagaggagggggca i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 201614 94 + 6586416 ggtttattttaattagggatgataagatgacaagcacggagacaactgtcttgaaaggagagtttattattt-acggtttc-caagagg-aggggca i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146568275 93 - 204313951 tgtttattttaattagttatgataaggtgacaaacatggagacaactgccttgaaaggggagttgtttattt-acagttcc-c-atagg-aagggca i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 405463 94 - 2125214 ggtttattttaattagttatgataaggtgacaaacatggagacaactgccttgaaagaagagttgtttattt-acagttcc-caagagg-aggggca i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 31365 90 + 376347 ggtttattttaattagttatgataaggtgataaacatggagacaactgccttgaaaggagagttgtttattt-acagttcc-ccagagg-agg---- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2112439 70 - 8137123 ---------------------ataagatgacaaacacacaaacaactgccccgaatggagagtttattacat-----ttcc-caagaggaaggggct i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60965791 95 - 77573801 gatttgttttaatcaggtgtgggaaaatgacaggcatggaagcaaatgccttgaaagaacagtttatctctt-ataattcc-caaggaaagggaaca i canFam3.chr6 I 603 C 0 e chlSab2.chr28 22218 1 - 21531802 I e manLeu1.NW_012101810v1 42155 1 - 2515279 I e cerAty1.NW_012002954v1 16881986 1 - 21915920 I e macNem1.NW_012019910v1 4292467 1 - 9440265 I e macFas5.chr3 33531247 1 + 192294377 I e rheMac8.chr3 33915267 12 + 185818997 I a score=1968838.000000 s hg38.chr7_KI270899v1_alt 51416 256 + 190869 ---tggcataccaggcaaggccatgtgggaaa-gcaccagctcagccgggaggcagcaggagtgagg--ggt-gagca-ggcccagagc-ccttatcgtgg---------gaaggagctggggaggtgtggtgacc-agctgagcaggcctagggct--ggc-gtttcagca-attttggagggctctg------------gg-ctctagttgtctggttcc-tggccctgggtga-ttcagggta-gggaaat-actggcctgggagtgcaggagcccatgtagg-aggt-ggctgg s panTro5.chrUn_NW_015974890v1 3203 274 - 15765 ---tgg-atatccagcaaggccatgcgggaaaggcaccag-tcatcgagga-gcagcaggagtggagttggt-gagca--gcccagagc-ctttatc-tgg---------gaaggagctggggaggtgtggtgatcaagctgagcaggcctagggcttgggc-atttcagcatattttggagggctctggctgccaggtgtgg-cttacgttgtctggttccttggccct-ggtgattttggggta-gggaaataactggcctgggagtgcaggacgccatataggaaggtgggttgg i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 12330 270 - 432965 ---tggcataccaggcaaggccatgcaggaaa-gcaccagctcagccaggaggcagcaggagtgagg--ggt-gagca-ggcccagagc-ctttatcgtgg---------gaaggagctggggaggtgtggtgatc-agctgagcaggcctagggct-gggc-atttcagca-attttggagggctctgggctgcaggtgtggcctctagttgtctggttcc-tggccatgggtga-tttagggta-gggaaat-actggcctgggagtgcaggagcccatatagg-aggt-ggctgg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 75376 270 + 85365473 ---tggcctaccaggcaaggccatgcgggaaa-gcaccagctcagctaggaggcagcaggagtgagg--ggt-gagca-ggcccagagc-ctttaccatgg---------gaacgagctggggaggtgcggtgatc-agctgagcaggcctggggct-ggac-cttccagca-attgtggagggctctgggctgcaggtgtggcctctagttgtctggttcc-tggccctgggtga-tttagcgta-gagaaac-actggcctgggagtgcgggagcccatatagg-aggt-ggctgg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33915279 270 + 185818997 ---TGGcataccaggcaaggccatgtgggaaa-gccccagttcagccagcaggcagcaggagtgagg--ggc-cagca-ggcccagagc-ctttatcgtgg---------gaaggagctggggaggtggggtgagc-agctgagcaggcctggggct-ggac-gtttcaaca-attttggagggctctgagctgcaggtgtggcctctagctgtctggtccc-tggccctgggtga-tttagggta-ggaaaat-actggcctgggagtgcaagagcccatatagg-aggt-ggctgg i rheMac8.chr3 I 12 C 0 s macFas5.chr3 33531248 270 + 192294377 ---TGGcataccaggcaaggccatgtgggaaa-gccccagttcagccaggaggcagcaggagtgagg--ggc-cagca-ggcccagagc-ctttatcatgg---------gaaggagctggggaggtggggtgagc-agctgagcaggcctggggct-ggac-gtttcaaca-attttggagggctctgagctgcaggtgtggcctctagctgtctggtccc-tggccctgggtaa-tttagggta-ggaaaat-actggcctgggagtgcaagagcccatatagg-aggc-ggctgg i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4292468 270 - 9440265 ---TGGcataccaggcaaggccatgtgggaaa-gccccagttcagccaggaggcagcaggagtgagg--ggc-cagca-ggcccagagc-ctttatcgtgg---------gaaggagctggggaggtggggtgggc-agctgagcaggcctggggct-ggac-gtttcaaca-attttggagggctctgagctgcaggtgtggcctctagctgtctggtccc-tggcactgggtaa-tttagggta-ggaaaat-actggcctgggagtgcaagagcccatatagg-aggc-ggctgg i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16881987 270 - 21915920 ---TGGCGTAccaggcaaggccatgtgggaaa-gccccagttcagccaggaggcagcaggagtgagg--ggc-cagca-ggcccagagc-ctttatcgtgg---------gaaggagctggggaggtggggtgagc-agctgagcaggcctggggct-ggac-gtttcaaca-attttggagggctctgagctgcaggtgtggcctctagctgtctggttcc-tggccctgggtga-tttagggta-ggaaaat-actggcctgggagtgcaagagcccatatagg-aggc-ggctgg i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 22219 270 - 21531802 ---TGGCGTAccaggcaaggccatgtgggaaa-gccccagttcagccaggaggcagcaggagtgagg--ggc-cagca-ggcccagagc-ctttatcgtgg---------gaaggagctggggaggtggggtgagc-agctgagcaggcctggggct-ggac-gtttcaaca-attttggggggctctgagctgtaggtgtggcctctagctgtctggttct-tggccctgggtga-tttagggta-ggaaaat-actggcctgggagtgcaagagcccacatagg-aggt-gggtgg i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 42156 270 - 2515279 ---TGGCGTAccaggcaaggccatgtgggaaa-gccccagttcagccaggaggcagcaggagtgagg--ggc-cagca-ggcccagagc-ctttatcgtgg---------gaaggagctggggagttggggtgagc-agctgagcaggcctggggct-ggac-gtttcaaca-attttggagggctctgagctgcaggtgtggcctctagctgtctggttcc-tggccctgggtga-tttagggta-ggaaaat-actggcctgggagtgcaagagcccatatagg-aggc-ggctgg i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 201708 269 + 6586416 ---tggcgta-caggcaaggccatgtgggaaa-atcccagttcagccagaaggcagcaggagggagg--ggc-gagca-ggcccagagc-ctttaccgtgg---------gaaggagctggggaggtggggtgagc-agctgggcaggcctggggct-ggac-gtttcagca-attttggagggctctgggctgcaggtgtggcctctagctgtctggttcc-tggccctgggtga-tttagggta-ggaaaat-actggcctgggagtgcaagagcccacaaagg-aggc-ggctgg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146568368 270 - 204313951 ---tggcgaaccaggcaaggccatgcaggaaa-gcagcagctcagccaggaggcagcaggagtgagg--ggc-aagca-ggcccagagt-ctttatcgtgg---------gaaggagctggggaggctgggtgagc-agctgagcaggcccagggct-ggac-gcttgagca-attttggagggctctggactacagctatggcctctagtggtctggtttc-tggccctgggtgc-tttagggta-gggaaat-actggcttgggtgtatgagagcccatacagg-aggt-ggctgg i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 405557 270 - 2125214 ---tggcgaaccaggcaaggccacacaggaaa-gcaccagctcagccaggaggcagcaggagcaagg--ggc-aagca-ggcccagagt-ctttatcgttg---------gaaggagctggggaggcggggtgaac-agctgagcaggcctagggct-agac-gcttcagca-attttggagggctctggaatgcagctatggcctctagtggtctggcttc-tggccctgggtga-tttagggta-gggaaat-actggcttgggagtgtgagagcccacacagg-aggt-ggctgg i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 31455 254 + 376347 ------------------ggccacacagg-aa-gcatcagctcagccaggaggcagcaggagcgagg--ggc-aagca-ggcccagagt-ctttatcgtgg---------gaaggagctggggaggcggggtgagt-agctcagcaggcctagggcc-ggat-gcttcaaca-attttggagggctctggactgcagctatggcctctagtggtccggtttc-tggccctgggtga-tttagcgta-gggaaat-actggcctgggagtgtgagagcccatacagg-aggt-ggctgg i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2112509 274 - 8137123 ---tgtcatatcacgtagagccacctggagaa-gcactggatctgttagaag---gcgggagtgagg--aga-aagca-tctgaaaaacgttttaatgtggttctta---gaaggagcaggtgaggtg-ggcaagc-agctgagcagagctggggtg-ggag-gtctgaatt-gttttggaggacccttggttgtaggggtgctctctggcagtctggatcc-tagttcagggtga-tttaggacagggggaat-gttggttctgcagtgtgagagcccacgcagg-aggc-gacccc i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60965886 198 - 77573801 cgccagttcaccacgcagggccatgcagggaa-gca-caggttggtcagaaggcagaaggagccatg--gatggagcatggcccagagc-ctctgttgtggcttccatgggaaggaaagggtgaggcagagtcagc-agctgagcaggctcagggtt-gggtagtttgaaga-atcttggcaggctctgggccatagg-gTGG-----------CTGG-------------------------------------------------------------------------------- i canFam3.chr6 C 0 I 12 a score=1587954.000000 s hg38.chr7_KI270899v1_alt 51672 266 + 190869 agccaagggc--ttggattgggcggtttg--cacatgaaaggcacactcaccaggga---------gtccccaggaattagctacccctgggagaggcagttccttctctggtcagtgaggccccaggatgtcag--agcat-cataaaata-ca-gaaattaaaaaa---ata--ggattaatacaactT-GGAGGAAGCATATGGGGTTTTGGGGATGCCGTTCAGACCTCACACT-GGTCCAAGCCTTCTGCCTT---------------------CCTGGGACTT--CTCCACCTCTCCACGCGGTGACA s panTro5.chrUn_NW_015974890v1 3477 268 - 15765 agcaatgggcctttggattgggcggattgcccacatgaaaggcacact-acca-gga---------gt--ctaggaa-tatctacccctggcgaaggcagttcc-tctctggtcagtgaggccccaggatgtcagttagcatccataaaatacca-gaaattaaaaaa---atattgcattaatacaactTGGGAGGAAGCATATGGG--TTTTGGGATGCCGTTCAGACCTCACACTCGGTTCAAGCCTTCTGCCTT---------------------CT--GGACTT--CTACCACTCTCCACGCGGTGACA i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 12600 266 - 432965 agccaagggc--ttggattgggcggtttg--cacatgaaaggcacactcaccaggga---------gtccctaggaattagctacccctgggagaggcagttccttctctggtcagtgaggccccaggatgtcag--agcat-cataaaata-ca-gaaattaaaaaa---ata--tgattaatacaactT-GGAGGAAGCATATGGGGTTTTGGGGATGCCGTTCAGACCTCACACT-GGTCCAAGCCTTCTGCCTT---------------------CCTGGGACTT--CTCCACCTCTCCATGCGGTGACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 75646 252 + 85365473 ggccaagggc--ttgcattgggcggtttg--cacatgaaaggcacactcaccaggga---------gtccccaggaattagctacccccgggagaggtagttccttctctggtcagtgacgccccaggatgtcag--agcac-----------------attttaaaa---ata--tgattaatacaactT-GGAGGAAGCATACGGGGTTTGGGGGATGCCGTTCAGACCTCACACT-GGTCCAAGCCTTCTGCCTT---------------------CCCGGGACTT--CTCCACCTCTCCACCAGGTGACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33915549 259 + 185818997 agccatgggc--ttggattgggtggtttg--cacatgaaaggtgcacacaccaggga---------gtccccaggaattag----ccccaggaggggcagtcccttctctggtcagtgaagccccaggatgtcag--agcat-cataaaata-ca-gaaattttaaaa---ata--tgattaatataaCAT-GGAGGAAGCATATGGGGTTTTGCAGATGCCGTTCAGACCTCACACT-GGTCCAAGCCTTCTGCCTT---------------------CCTGGAACTT-----CACCTCCCCACCAGGTGACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33531518 259 + 192294377 agccatgggc--ttggattgggtggtttg--cacatgaaaggtgcacacaccaggga---------gtccccaggaattag----ccccaggaggggcagtcccttctctggtcagtgaagccccaggatgtcag--agcat-cataaaata-ca-gaaattttaaaa---ata--tgattaatataaCAT-GGAGGAAGCATATGGGGTTTTGCAGATGCCGTTCAGACCTCACACT-GGTCCAAACCTTCTGCCTT---------------------CCTGGAACTT-----CACCTCCCCACCAGGTGACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4292738 259 - 9440265 agccatgggc--ttggattgagtggtttg--cacatgaaaggtgcacacaccaggga---------gtccccaggaattag----ccccaggaggggcagtcccttctctggtcagtgaagccccaggatgtcag--agcat-cataaaata-ca-gaaattttaaaa---ata--tgattaatacaaCAT-GGAGGAAGCATATGGGGTTTTGCAGATGCCGTTCAGACCTCACACT-GGTCCAAGCCTTCTGCCTT---------------------CCTGGAACTT-----CACCTCCCCACCAGGTGACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16882257 259 - 21915920 agccatgggc--ttggattgggtggtttg--cacatgaaaggtgcacacaccaggga---------gtccccaggaattag----ccccaggaggggcagtcccttttctggtcagtgaagccccaggatgtcag--agcat-cataaaata-ca-gaaattttaaaa---ata--tgattaatacaaCAT-GGAGGAAGCATATGGGGTTTTGCGGATGCCGTTCAGACCTCACACT-GGTCCAAGCCTTCTGCCTT---------------------CCTGGAACTT-----CACCTCCCCACCAGGTGACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 22489 259 - 21531802 agccatgggc--ttggattgggtggtttg--cacatgaaaggtgcacacaccagggg---------gtccccaggaattgg----ccctaggaggggcagtcccttctctggtcagtgaagccccaggatgtcag--agcat-cataaaata-ca-gaaattttaaaa---ata--tgattaatacaaCAT-GGAGGAAGCATATGGGGTTTTGAAGATGCCGTTCAGACCTCACACT-GGTCCAAGCCTTCTGCCTT---------------------CCTGGAACTT-----CACCTCCCCACCAGGTGACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 42426 259 - 2515279 agccatgggc--ttggattgggtggtttg--cacatgaaaggtgcacacaccaggga---------gtccccaggaattag----ccccaggaggggcagtcccttctctggtcagtgaagccccaggatgtcag--agcat-cataaaata-ca-gaaattttaaaa---atc--tgattaatacaaCAT-GGAGGAAGCATATGGGGTTGTGCGGATGCCGTTCAGACCTCACACT-GGTCCAAGCCTTCTGCCTT---------------------CCTGGAACTT-----CACCTCCCCACCAGGTGACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 201977 259 + 6586416 agccatgggc--ttggattgcgtggtttg--cacatgaaaggttcactcaccaggga---------gtccctgggaattag----ccctaggaggggcagtcccttctctggtcagtgaggccccaggatgtcag--agcat-cataaaata-ca-gaaattttaaaa---ata--tgattaatacaaCGT-GGAGGAAGCATGTGGGGTTTTGCAAATGCCGTTCAGACCTCACACT-GGTCCAAGCCTTCTGCCTT---------------------CCTGGGACTT-----CACCTCCCCACCAGGTGACC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146568638 222 - 204313951 agccatgggc--ttggactgggtggtttg--catatgaaag---cgctcaacaggga---------atcccctggaattag------ctag-------------------------------ccctggatg---g--ggcaT-TATACAATA-CA-TAAATTTTTAAAAATATA--TGATTAA-ACAACTT-GGAGGAAGCATATGAGGTTTTGGGGATGCAGTTCAGACCTCACACT-GGTCCATGCATTCTGCCTT---------------------CCTCGG---T--CTTCACCTCCCCACCAGGTGACA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 405827 225 - 2125214 agccatgggc--ttggactgggtggtttg--catatgaaag---cgctcaacaggga---------gtcccctggaattag------ctag-------------------------------ccctggatg---g--agcaT-CATACAACA-CA-GAAATTTAAAAATATATA--TGATTAG-ACAACTT-GGAGAAAGCACATGGGGTTTTGGGGATGCAGTCCAGACCTCACACT-GGTCCATGCATTCTGCCTT---------------------CCTCGGCTTT--CTCCAACTCCCCACCAGGTGGCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 31709 225 + 376347 agccatgggc--ttgaactgggtggtttg--catatgaaag---cactcaacaggga---------gtcccctggaattag------ctag-------------------------------ccctggatg---g--ggcaT-CATACAATA-CA-GAAATTTTTAAAAAAATA--TGATTAA-ACAACTT-GGAGGAAGCATATGGGGTTTTGGTGATGCAGTCCAGACCTCACACT-GGTCCATGCATTCTGCCTT---------------------CCTCGGCCTT--CTCCACCTCCCCACGAGGTGACT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2112783 277 - 8137123 agac-tgggc--ttacatcagtcattttg--cacatgagaggcacactcacgggggagggctccctgttcttaggaactggctggccctggaaggggcagtctcttct-tggccgtggaggccccagtgtgtcaa--agcat-tatacaata-taggaaaatttaaaa---gca--tgattaatacaGCTT-GGTGGAA--------------------GCTGTCGAGGCCTCTTACT-GGCCCGGGCCTTGTGCTTTGAGATGTGCCTACAGCCTCCCTTTGGGACTTGTGTCAATGTCCCCACTAGGTGACC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60966084 12 - 77573801 I a score=5496177.000000 s hg38.chr7_KI270899v1_alt 51938 752 + 190869 ATGGGCAACAGAGACTGGGCCAGGCGGCACGCTTCTTCCCCCGCCCCGCTGACCCCACC--------AGAAAACACCATTTGCCGTATGATCT-CTGGG-CAGTGGAGGTCGTACTGTGGG--AGGGG-CAGCTCTGTTCTTGAGCTCCTT-CCACTGGGAGCCCTCAGGCTCAGAGCCCACGTCCCTCCCACCTCCCATCTCCATACCT--------TC---TGTCAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATCGAGTTCAACAAA---TCTGTTCTTACCCA-CACAGGGG-CAGCTAATTTATGG--AGCTCAGACTCAGTCTAGGTCCCTTCTTCGGGG--TAATGC----TG---TTTTTGGAACCCCAGACAAAGTAAC--AGCAACTCCAAGATTTTCAC-AGAAGCTTCCTTT-GATGACTCCAAGCTCCCCCAGACC-CGGTGGAAA-CGC---AGACTCCTTGGCT-AACACTGC-CATGGGAGTAGAACCCACCACAAGCCCCCTACACTCCACATGGGGAGAGCTG-GGACCCA--TGCCCTAC-TGGC--TAGAAAG-TGGTCCAT--CCTGAGGGACCTGAGTCAACAAGGATGCCGGGGCTGAGCCGG-GCCCTGACGGGCACCCGGGACCTCATGG--G-GGAGCATCTGAGCAGGGCTGGGATGAATG-AGGAGACACCAGCAAAGAGGATGTTGAGAACAATTCCTGGGGAGAAAATTGTGGTCTCATTACCTC-ATTCGAAGTGGCCTGATCTCAA-GGAAGCAGGGA-GCAGAGAAACATAATCGGA s panTro5.chrUn_NW_015974890v1 3745 754 - 15765 ATGGGCAACAGCAGATGG--CATGC-GCACG-TTCTT-CCCCGCCACCCTGACCCCACC-------TAGAAAACACCATTTTGCGTGTGATCTCCTGCGTCAGTGGAGGTCGTACTGTTGG--AGGGGCCAGCTCTGTTCTTGAG-TCCTT-CTACCGGGAGCCCTCAGCTTCAGAG-CCACGTCCCT-CCACCTCCCAT-TCCATACTT-----CTCCC---TGTCATATATTAGAATGAGTAGTATTATGCAAATGTAATGCAAAAATCGAGTTCAATAAA---TCTGTTCTTACCCACCACAGGGGCCAGCTAATTTATGGGAAGCTCAGTCAC-GTCTAGGTTGCTTCTTCGGGCGTTAATTT----GC---GTTTTGGAACCCCA-AC-AAGTAAC--AGCAACTCC-AGA-TTTCAC-AGAAGCTTCCTCTAGATGACTC--AGCT--CCCAGACCTCGGTGGAAATCGC---AGACTCTTGGGCTAAACGCTGCTCAT-GGAGTAGAA-CCACCAGAAG-CCCCTAC-CTCCA-AT-GGGAGAGCTGCGGACCCA--TGCCCTAC-TGGTCATAGAAAGATGGTCCACTGCCTGAGAGACCTGAGTCAACAAGGATG-CGGGGTGCAGCCGGCGCCCTGAC--GCACCCGGGACCTCATGG--GCGGAGCATCTGAGCAGGGCT--GATGAATGTAGGAGACACCAGCGAAGAGGATGTTGAGAACAATTCCTGGGGAGAAAA-TGTGGTCTCATTACCTCTATTCGAAGTGGCCTGATCTCGATAGAAGCAGGGATTCAGAGAAACATAATCGGA i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 12866 752 - 432965 ATGGGCAACAGAGACTGGGCCATGTGGCACGCTTCTTCCCCCGCACCCCTGACCCCACC--------AGAAAACACCATTTGCCGTATGATCT-CTGGG-CAGTGGAGGTCGTACTGTGGG--AGGGG-CAGCTCTGTTCTTGAGCTCCTT-CTACTGGGAGCCCTCAGGCTCAGAGCCCACGTCCCTCCCACCTCCCATCTCCATACCT-----TCTCC---TGTCAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATCGAATTCAACAAA---TCTGTTCTTACCCA-CACAGGGG-CAGCTAATTTATGG--AGCTCAGACTCAGTCTAGGTACCTTCCTCGGG---TAATGC----TG---TTTTTGGAACCCCAGACAAAGTAAC--AGCAACTCCAAGATTTTCAC-AGAAGCTTCCTTT-GATGACTCCAAGCTCCCCCAGACC-TGGTGGAAA-CGC---AGACTCCTTGGCT-GATGCTGC-CATGGGAGTAGAACCCACCAGAAGCCCCCTACACTCCACATGGGGAGAGCTG-GGACCCA--TGCCCTGC-TGGC--TAGAAAG-TGGTCCAT--CCTGAGGGACCTGAGTCAACGAGGATGCCGGGGCTGAGCCGG-GCCCTGACGGGCACCCGGGACCTCACGG--G-GGAGCATCTGAGCAGGGCTGGGACGAATG-AGGAGACGCCAGCAAAGAGGATGTTGAGAACAATTCCTGGGGAGAAAATTGTGGTCTCATTACCTA-ATTCGAAGTGGCCTGATCTCGA-GGAAGCAGGGA-GCAGAGAAAC--AATCGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 75898 753 + 85365473 ATGGGCGACAGAGACTGGGTCTTGGGACCCGCTTCTTCCCCCGCACTCCTGACCCCACC--------AGAAAACACCATTTGCTGTGTGATCT-CTGGG-CAGTGGAGGTCGTGCTGTGGG--AGGGG-CAGCTCTGTTCTTGGGCTCCTT-CTACTGGGAGCCCTCAGGCTCCGAGCCCACATCCCTCCCACCTCCCATCTCCACACCT-----TCTCC---TGTCAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATGTAGTTCAACAAA---TCTGTTCTTATCCA-CACAGGGG-CAGCTAATTTATGG--AGCTCAGACTCAGTCTAGGTTCCTTCTTCGGG---TAATGC----TG---TTTTTGGAACCCCAGACAAAGTAAC--AGCAACTCCAAGATTGTCAC-AGAAGGTTCCTTT-GATGACTCCAAGCTCCCCCAGACC-TGGTGGAAA-CTC---AGACTCCTTGGCT-AACGCTGC-CATGGGAGTAGAGCCCACCAGAAGCCCCCTACACGCCACATGGGGAGAGCTG-GGACCCA--CGCCCTAC-TGGC--TAGAAAC-TGGTACAT--CCTGAGGGACCTGAGTCAACAAGGG-GCCGGGGCTGAGCCGG-GCCCTGACGGGAACCCGGGACCTCATGG--G-GGAGCGTCTGGGCAGGGCTGGGATGAACG-AGGAGACACCAGCAAAGAGGATGTCGAGAACAATTCCTGGGGAGAAAATTATGGTCTCACTACCTC-CTTCGAAGTGGCCTGATCTCGA-GGAAGCCGGGA-CCGGAGAAACATAATCGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33915808 751 + 185818997 ACGGGCAGCGGAGACTGGGCCTTGGGGCACGCTTCTTCCCCCGCACCACTGACCCCACCAGAAAACAAGAAAACACCATTTGCTGTGTGACCT-CTGGG-AAGCGGAGGTTGTACTGTGGG--AGCGG-CGGCTCTGTTCCTGGGCTCCTT-CTACTGGCAGCCCTCAGGCTCAGAGGCCACATGCCTCCCGTCTCCCATCTCCATACCT-----TCTCC---TCTCAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATTGAGTTCAACAAA---TCTGTTCTTATCCA-CACAGGCG-GAGCTAATTTATGG--AGCTCAGACTCAGTCTAGTTTCCTTCTTTGGG---TAATGC----TG---TTTTTGAAATCCCAGACAAAGTAAC--AGCAACCCCAGGATTTTCAC-AGACGTTTCCTTT-GATGACTCCAAGCT-CCCCAGACC-TGGTGGAAA-CTTTGATGACTCCGTGGCT-AACGCTGC-CATGGGAGTAAAACCCACCAGAAGCCCCCTACACTCCACATGGGGAGAGCTG-GGACCCA--TGCCCTAC-TGGC--TAGAAAG-GGGTCCAT--CCTGAGGGAACTGAGTCAACGAGGATGCCAGGGCTGAGCTGG-GCCCTGATGGG-ACCTCGGACCTCCTGG--G-GGAGCATCTGAGCAGGGCTGGGATGAATG-AGGAGACACCAGCAAAGAGGATGTTGAGAACAATTCCTGTGGAGAAAATTATGGACTCATTACCGC-ATTTGAAGTGGCCTGATCTCGA-GGAAGCAGGGA-GCAGA------------CA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33531777 752 + 192294377 ACGGGCAGCGGAGACTGGGCCTTGGGGCACGCTTCTTCCCCCGCACCACTGACCCCACCAGAAAACAAGAAAACACCATTTGCTGTGTGACCT-CTGGG-AAGCGGAGGTTGTACTGTGGG--AGCGG-CGGCTCTGTTCCTGGGCTCCTT-CTACTGGCAGCCCTCAGGCTCAGAGGCCACATGCCTCCCGTCTCCCATCTCCATACCT-----TCTCC---TCTCAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATTGAGTTCAACAAA---TCTGTTCTTATCCA-CACAGGCG-GAGCTAATTTATGG--AGCTCAGACTCAGTCTAGTTTCCTTCTTTGGG---TAATGC----TG---TTTTTGAAATCCCAGACAAAGTAAC--AGCAACCCCAGGATTTTCAC-AGACGTTTCCTTT-GATGACTTCAAGCT-CCCCAGACC-TGGTGGAAA-CTTTGATGACTCCGTGGCT-AACGCTGC-CATGGGAGTAAAACCCACCAGAAGCCCCCTACACTCCACATGGGGAGAGCTG-GGACCCA--TGCCCTAC-TGGC--TAGAAAG-GGGTCCAT--CCTGAGGGAACTGAGTCAACGAGGATGCCAGGGCTGAGCTGG-GCCCTGATGGGCACCTCGGACCTCCTGG--G-GGAGCATCTGAGCAGGGCTGGGATGAATG-AGGAGACACCAGCAAAGAGGATGTTGAGAACAATTCCTGTGGAGAAAATTATGGACTCATTACCGC-ATTTGAAGTGGCCTGATCTCGA-GGAAGCAGGGA-GCAGA------------CA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4292997 752 - 9440265 ACGGGCAGCGGAGACTGGGCCTTGGGGCACGCTTCTTCCCCCGCACCACTGACCCCACCAGAAAACAAG-AAACACCATTTGCTGTGTGACCT-CTGGG-AAGCGGAGGTTGTACTGTGGG--AGCGG-CGGCTCTGTTCCTGGGCTCCTT-CTACTGGCAGCCCTCAGGCTCAGAGGCCACATGCCTCCCGTCTCCCATCTCCATACCT-----TCTCC---TCTCAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATTGAGTTCAACAAA---TCTGTTCTTATCCA-CACAGGCA-GAGCTAATTTATGG--AGCTCAGACTCAGTCTAGTTTCCTTCTTTGGG---TAATGC----TG---TTTTTGAAATCCCAGACAAAGTAAC--AGCAACCCCAGGATTTTCACAAGACATTTCCTTT-GATGACTCCAAGCT-CCCCAGACC-TGGTGGAAA-CTTTGATGACTCCGTGGCT-AACGCTGC-CATGGGAGTAAAACCCACCAGAAGCCCCCTACACTCCACATGGGGAGAGCTG-GGACCCA--TGCCCTAC-TGGC--TAGAAAG-GGGTCCAT--CCTGAGGGAACTGAGTCAACGAGGATGCCAGGGCTGAGCTGG-GCCCTGATGGGCACCTCGGACCTCCTGG--G-GGAGCATCTGAGCAGGGCTGGGATGAATG-AGGAGACACCAGCAAAGAGGATGTTGAGAACAATTCCTGTGGAGAAAATTATGGACTCATTACCGC-ATTTGAAGTGGCCTGATCTCGA-GGAAGCAGGGA-GCAGA------------CA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16882516 752 - 21915920 ACGGGCAGCGGAGACTGGGCCTTGGGGCACGCTTCTTCCCCCACACCACTGACCCCACCAGAAAACAAGAAAACACCATTTGCTGTGTGACCT-CTGGG-AAGCAGAGGTTGTACTGTGGG--AGCGG-CGGCTCTGTTCCTGGGCTCCTT-CTACCGGCAGCCCTCAGGCTCAGAGGCCACATGCCTCCCGTCTCCCATCTCCATACCT-----TCTCC---TCTCAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATTGAGTTCAACAAA---TCTGTTCTTATCCA-CACAGGCG-GAGCTAATTTATGG--AGCTCAGACTCAGTCTAGTTTCCTTCTTTGGG---TAATGC----TG---TTTTTGAAATCACAGACAAAGTAAC--AGCAACCCCAAGATTTTCAC-AGACATTTCCTTT-GATGACTCCAAGCT-CCCCAGACC-TGGTGGAAA-CTTTGATGACTCCGTGGCT-AACGCTGC-CATGGGAGTAAAACCCACCAGAAGCCCCCTACACTCCACATGGGGAGAGCTG-GGACCCA--TGCCCTAC-TGGC--TAGAAAG-GGGTCCAT--CCTGAGGGAACTGAGTCAACGAGGATGCCAGGGCTGAGCTGG-GCCCTGATGGGCACCTCGGACCTCCTGG--G-GGAGCATCTGAGCAGGGCTGGGATGAATG-AGGAGACACTAGCAAAGAGGATGTTGAGAACAATTCCTGTGGAGAAAATTATGGACTCATTACCGC-ATTTGAAGTGGCCTGATCTCGA-GGAAGCAGGGA-GCAGA------------CA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 22748 747 - 21531802 ACGGGCAGCAGAGACTGGGCCTTG-----CGCTTCTTCCCCCGCACCACTGACCCCACCAGAAAACAAGAAAACACCATTTGCTGTGTGACCT-CTGGG-AAGTGGATCTTGTACTGTGGG--AGCGG-CGGCTCTGTGCCTGGGCTCCTT-CTACTGGCAGCCCTCAGGCTCAGAGGCCACATGCCTCccatctcccatctccatacct-----tctcc---tctcAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATCGAGTTCAACAAA---TCTGTTCTTATCCA-CACAGGCG-GAGCTAATTTATGG--AGCTCAGACTCAGTCCAGTTTCCTTCTTTGGG---TAATGC----TG---CTTTTGAAATCCCAGACAAAGTAAC--AGCAACCCCAATATTTTCAC-AGACGTTTCCTTT-GATGACTCCAAGCT-CCCCAGACC-TGGTGGAAA-CTTTGATGACTCCATGGCT-AATGCTGC-CATGGGAGTAAAACCCACCAGAAGCCCCCTACACTTCACATGGGGAGAGCTG-GGACCCA--TGCCCTAC-TGGC--TAGAAAG-GAGTCCAT--CCTGAGGGAACTGAGTCAACGAGGATGCCAGGGCTGAGCTGG-GCCCTGATGGGCACCTCGGACCTCCTGG--G-GGAGCATCTGAGCAGGGCTGGGATGAATG-AGGAGACACCAGCAAAGAGGATGTTGAGAACAATTCCTGTGGAGAAAATTATGGACTCATTACCAC-ATTTGAAGTGGCCTGATCTCGA-GGAAGCAGGGA-GCAGA------------CA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 42685 752 - 2515279 ACGGGCAGCGGAGACTGGGCCTTGGGGCACGCTTCTTCCCCCACACCACTGACCCCACCAGAAAACAAGAAAACACCATTTGCTGTGTGACCT-CTGGG-AAGCAGAGATTGTACTGTGGG--AGCGG-CAGCTCTGTTCCTGGGCTCCTT-CTACTGGCAGCCCTCAGGCTCAGAGGCCACATGCCTCCCGTCTCCCATCTCCATACCT-----TCTCC---TCTCAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATTGAGTTCAACAAA---TCTGTTCTTATCCA-CACAGGCG-GAGCTAATTTATGG--AGCTCAGACTCAGTCTAGTTTCCTTCTTTGGG---TAATGC----TG---TTTTTGAAATCACAGACAAAGTAAC--AGCAACCCCAAGATTTTCAC-AGACATTTCCTTT-GATGACTCCAAGCT-CCCCAGACC-TGGTGGAAA-CTTTGATGACTCCGTTGCT-AACGGTGC-CATGGGAGTAAAACCCACCAGAAGCCCCCTACACTCCACATGGGGAGAGCTG-GGACCCA--TGCTCTAC-TGGC--TAGGAAG-GGGTCCAT--CCTGAGGGAACTGAGTCAACGAGGATGCCAGGGCTGAGCTGG-GCCCTGATGGGCACCTCGGACCTCCTGG--G-GGAGCATCTGAGCAGGGCTGGGATGAATG-AGGAGACACCAGCAAAGAGGATGTTGAGAACAATTCCTGTGGAGAAAATTATGGACTCATTACCAC-ATTTGAAGTGGCCTGATCTCGA-GGAAGCAGGGA-GCAGA------------CA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 202236 751 + 6586416 ACGGGCCTCAGAGACTGGGCCTTGGGGCACGCTTCTTCCCCCGCACCTCTGACCCCACCAGAAAACAAGAAAACACCATTTGCTGTGTGACCT-CTTGC-GAGCAGAGGTTGTACTGTGGG--AGGGG-CGGCTCTGTTCCTGGGCTCCTT-CTCCTGGGAGCCCCCAGGCTCAGAGGCCACAAGCCTCCCGTCTCCCATCTCCATACCT-----TCGCC---CCTCAT-TATTTAAATGAG-AGTATTATGCAAATGTAATGCCAACATCGAGTTCAACAAA---TCTGTTCTTATCCA-CACAGGCG-GAGCTAATTTATGG--AGCTCAGACTCAGTCTAGTTTCCTTCTTTGGA---TAATGC----TG---TTTTTGAAATCCCAGACAAAGTAAC--AGCAGCCCCAAGATTTTCAC-AGAAGTTTCCTTT-GATGACTCCAAACT-CCCCAGACC-TGGTGGAAA-CTC---AGGCTCCGTGGCT-AACGCTGC-CATGGGAGTAAAACCCACCGGAAGCCCCCTACACTCCACGTGGGGAGCGCTG-GGTAGAAAGTGCCCTCC-TGGC--TAGAAAG-GGGTCCAT--CCTGAGCGACCTGAGTCAACGAGGATGCCAGGGCTGAGCCGG-GCCCTGACAGGCACCTGGGACCTCCTGG--G-GGAGCATCTGAGCAGGGCTGGGATGAATG-AGGAGACACCAGCAAAGAGGATGTTGAGAACAATTCCTGGGGAGAAAATTGTGGACTCATTACCGC-ATTGGAAGAGGCCTGATCTCGA-GGAAGCAGGGA-GCAGA------------CA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146568860 747 - 204313951 ATGGGCAACAGAGACTGGGCCATGGAGCATGCTTCTTCCCCTGCACCCCTGACCCTGCC--------AGAAAACACCATTTGCCATTTGATCT-GTGGG-AAGCGGAGGTCATACTGCGGA--AGGGG-CAGCTGTGTTCCTGGGCTCCTT-CTAGTAGGAGCCCTCAGGCTCAAAGTCCACATTCC-CCCATCTCCCATCTCCATACCT-----CCTCC---TCTCAT-TACTTAAATGAG-AGTATTATGCAAATGTAATGCAAAAATCGAGTTCAACAAA---TCTGTACTCATCCA-CACAAGTG-TAGCTAATATATGG--AGGTCCGACTCAGTCTAGGTTCCTTCTTCTGG---CAACAT----TG---TTTTTTGAATCCCAGACAAGGTAAC--AGTAACCTCCAGATTTTTAC-AGCAGATTCCTTT-CATGACTCCAAGCTCCTCCAGACC-TGGTGGAGA-ACC---AGACTCCTTGGCT-AACGCTGC-CATGGGAGTAGAACCCACCAGAAGCCCCCTACACTCCACATGGGGAAAGCTG-GGACCCA--TGCCCTGA-TGGC--CAGAAAG-TGGTCCAT--CCTGATGGCCCTGAGTCAAGGAGGATGCCCAGCCTGAGCCCA-GCCCCGATGGGCACCTGGGGCCTCATAG--G-GGAGCATCTGAGCAGGGCTGGGATTAATG-AGGAGACACTAGCAAAGCGGATGGTGAGAACAATTCCTGGGGAGAAAATTGTCATCTCATTAACTC-ATTTGAAATGGCCTGATCTTGA-GGAAGCAAGTA-GCAGA------GAATCGGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 406052 747 - 2125214 ATGGGCAACAGAGACTGGGTCATGGGGCATGCTTCTTCTTCCGCACCCCCTACCCTGCC--------AGAAAACACCATTTGCCATATGATCT-GTGGG-AAGCGGAGGTCATACTGTGGG--AGGGG-CAGCTCTGTTCCTGGGCTCCTT-CTACTGGGAGCCCTCAGGCTCAGAGGCCACATTCC-CCCATCTTCCATCTCCATACCG-----TCTCC---TCTCAT-TACTTAAATGAA-AGTCTTATGCAAATGTAATGCAAAAATCGAGCTCAACAAA---TCTGTGCTCATCCA-CACAGGTG-CAACTAATTTATGG--AGGTCAGATTCAGTCTAGGTTCCTTCTTCTGG---CAACAT----TG---TTTTTGGAATCCCAGACAAGGTAAC--AGCAACCTCCAGATTTTCAC-AGCAGATTCCTTT-GATGACTCCAAGCTCCCCCAGACC-TGGTGGAGA-ACC---AGACTCCTTGGCT-AACGCTGC-CATGGGAGTAGAACCCACCAGAAGCCCCCTACACTCCACATGAGGAAAGCTG-GGACCCA--TGCCCTGA-TGGC--CAGAAAG-TGGCTCAT--CCTGACGGCCCTGAGTCAAGGAGGATGCCCAGGCTAAGCCCG-GCCCTGATGGGCACCTGGGGCCTCATAG--G-GGAGCATTTGAGCAGGGCTGGGATTAATG-AGGAGACACTAGCAAAGCAGATGATAAGAACAATTCCTGGGGAGAAAATTATCATCTCATTAACTC-ATTCGAAATGGCCTGACCTTGA-GGAAGCAAGGA-GCAGA------GAATCGGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 31934 733 + 376347 ATGGACAACAGAGGCCGGGCCATGGGGCATGCTTCTTCCCCTGCATCCCCGACCCTGCC--------AGAAAACACCATTTGCCATATGATCT-ATGGG-AAGCGGAGGTCATAC-GTGGG--AGGGG-TAGCTCTGGTCCTGGGCTGCTT-CTACTAGGAGCCCTCGGGCTCGGAGGCCACATTCC-CCCATCTCCCATCTCCATACCT-----TCTCC---TCTCAT-TACTTAAATGAG-AGTATTATGCAAATGTAATGAAAAAATCAAGTTCAACAAG---TCTGTGCTCATCCA-CACAGGTG-CAGCTAATTTATGG--AGGTCAGATTCAGTCTGGGTTCCTTCTTCTGG---CCATAT----TG---TTTTTGGAATCCCAGACAAGGTAAC--AGCAACATCCAGATTTTCAC-AGCAGATTCCTCT-GATGACTCCAAGCTCCCCTAGACC-TGGTGGAGA-ACC---AGACTCCTTGGCT-AACACTGC-CATGGGAGTAGAACCCACAAGAAGCCCCCTACACTCCACATGGGGAAACCTA-GGACCCA--TGCCCTGA-TGGC--CAGAAAG-TGGTCCAT--CCTGAAGGCCCTGAGTCAAGGAGGATGCCCAGGCTGAGCCCG-GCCCCGATGGGCACCTGGGGCCTCACAG--G-GGAGCATCTGAGCAGGGCTGGGATTAATG-AGGAGACACTAGCAAAGCGGATGATGAGAACAATTCCTGGGGAGAAAATTATCGTCTCATTAACTC-ATTTGAAATGGCCTGACCTCGA-GGAAGCAG--------------------GGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2113060 705 - 8137123 GTGGGCCACACAGATGAGGCCACAGGGGACCCTTCTT-----------TTGCCCCCAGT--------------CATCGTTTGCCATGTGATTT-CTGAG-AGGTGGAGGTCATGTTTCGGG-TGGGGG-CAGCTCTCTTCCTGGGCTTCTT-CCACAGGGAGCCCACAGGCTCAGAGGTTGTATCCC-ACCATCCTCCACCTCCTTACTG-----CCTCCTTATCTCAT-TATTTAAATGAG-AGTATTATGCAAATGCAATGCAAGAATCAAGTTCAACAAATCTTCTGTTCTCATCCA-CACAGGTG-CAGCTAATTTATGG--AGGTCAGACTCAATCTAGGTTCCTTC---AGG---CAATGC----TAAGTGTTTTGGAATCCTAGACAAAGGAATAAAGCAACTTTAAGATTTTTAC-AGCAGGTTCCTTT-GATGACTCTAAGCTCCCCCAGGCC-TGGTGAAGA-CCC---AGACCCATTTGCT-AAGGCCAC-CA-AGGAGTAGAAGCCACGAGA---TCTCTTTGCTCCACAT-GAGAGTATAG-GGACCCA-------------GC--CTG--AG--------T--CTTGGAGG------------GAGGATG----GGCTGAGCCAG-GCCCTGACCTGTATCCAGGACTCTGAGGCAG-GGAACATCTGAGCAGGGATGGGGTCAG-G-AGGAGACAC-AGCAGAGAAGGTGTTGCTAATGGCCCTCAGAGAGGAAATTAGGGTCTCATTACTTT-ATTCGGAATGGCCTGAGCTTGT-GGGAGCAGGGA-GCAGGGAAACATAATTTGA i otoGar3.GL873611 C 0 M 485 s canFam3.chr6 60966096 693 - 77573801 ATGGACAGCAGAGGCCAGGCAGTAGGTGGTGCCTCTCCCGCCTCTC---------------------AGAAAATGCCATTTGCCATTTTATCT-CAGAG-AAGTGGAGCTCATGTTGTCGGGTGGGGA-CAACTCTGTTTCTGGGTTCCTTGATGCTGGGAGCACCCAGGCTGGGCAGCCATATCTCACCCATC-CTCATTTTCTTATTTTCTCATCTCC---TCTCAT-CATTTGAATGAG-AGCCTTATGCAAATGC-ATGCAAAAATGGAGTTCAACAGG---T------------G-CA-----G-AATTTAACTTATGG--GG-TCAGAATCAACCTAGGTTCCTTCTTCCAA---CAACGCTAAATG---TTTTTGGAATCCCAGACAAAGGAACAAAGCAACTCCAAGATTTCGAT-GGTAGTTCTCTTC-AGAG---CCAAGCTTCTCCAGCCC-CGGCAGAGA-CTC---AGTTTCCTTTGCA-GAGGCTAC-CATGGACACAGAACCCACTAGAGGCTCTC----CTGTCAATGGG---ATCTT-GGATGTG--TGCCCAATAAGGT--CAGACAG-TCATCCAC--CCTGA-----CTGAGGGAGAGAGGGCAC----------CTGG-GTCCTAGTAAG---------------AG--G-ACAACATCTGAGCAGGGCTCAGATG---G-AGCAGATGGCACAGAGAGGGATGTTAATAACTATTCTTGGGAAGGGAATTATGGTCCAGTTGCCCC-ATTAGGGGTGGCCTAAGTGTGT-GGAAATGGCAA-GAAGAGAAACATAGTTTGA i canFam3.chr6 I 12 C 0 a score=485147.000000 s hg38.chr7_KI270899v1_alt 52690 69 + 190869 ACATCTC---TGTGCA-TCAGG-TTTTCGT-------------------------------------------ACTGACCGTGAAGCACC-----------AAGTGGAAGCAAGCCTCGCGCTGGGAG s panTro5.chrUn_NW_015974890v1 4499 70 - 15765 ACATCTC--TTGCGCATTCAGGTTTTTCGT-------------------------------------------ACTGAC--TGAAGCACC-----------AAGCGGAAGCAAGCCTCGCGCTGGGAG i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 13618 69 - 432965 ACATCTC---TGTGCA-TCAGG-TTTTCGT-------------------------------------------ACTGACCGTGAAGCGCC-----------AAGTGGAAGCAAGCCTCGCGCTGGGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 76651 68 + 85365473 GCATCTC----GTGCA-TCAGG-TTTTCGT-------------------------------------------ACTGACCATGAAGCACC-----------AAGTGGAAGCAAGCCTCGCGCTGGGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33916559 69 + 185818997 GCATCTC---TGTGCA-TCAGG-TTTTCGT-------------------------------------------ACTGACAGTGAAGCACC-----------AAGGGGAAGCAAGCCTCATGCTGGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33532529 69 + 192294377 GCATCTC---TGTGCA-TCAGG-TTTTCGT-------------------------------------------ACTGACAGTGAAGCACC-----------AAGGGGAAGCAAGCCTCATGCTGGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4293749 69 - 9440265 GCATCTC---TGTGCA-TCAGG-TTTTCGT-------------------------------------------ACTGACAGTGAAGCACC-----------AAGGGGAAGCAAGCCTCATGCTGGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16883268 69 - 21915920 GCATCTC---TGTGCA-TCAGG-TTTTCCT-------------------------------------------ACTGACAGTGAAGCACC-----------AAGGGGAAGCAAGCCTCATGCTGGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 23495 69 - 21531802 GCAACTC---TGTGCA-TCAGG-TTTTTGT-------------------------------------------ACTGACAGTGAAGCACC-----------AAGGGGAAGCAAGCCTCATGCTGGGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 43437 69 - 2515279 GCATCTC---TGTGCA-TCAGG-TTTTCGT-------------------------------------------ACTGACAGTGAAGCACC-----------AAGGGGAAGCAAGCCTCATGCTGGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 202987 69 + 6586416 GCATCTC---TGTGCA-TCAGG-TTTTCGT-------------------------------------------ACTGACAGTGAAGCACC-----------AACGGGAAGCAAGCCTCATGCTGGGAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146569607 69 - 204313951 GCATCTC---TGTGAA-TCAGG-TTTTCAT-------------------------------------------ACTGACAGCGAAGCCCA-----------ACGTGGAAGTAAGCCTCATGCTGGGAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 406799 69 - 2125214 GCATCTC---CGTGAA-TCAGG-TTTTCAT-------------------------------------------ACTGACAGCGAAGCACA-----------AGGTGGAAGCAAGCCTCATGCTGGGAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 32667 69 + 376347 GCATCTC---TGTGAA-CCAGG-TTTTCAT-------------------------------------------ACTGACGGCGAAGCACA-----------ACGTGGAAGCAAGCCTCACGCTGGGAG i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 60966789 126 - 77573801 GCATCTCTTTTGAAAA-TCAAG-TTTTCTttcttttttaaaaaaattttattttatttattcatgagggacacacagagagagaggcagagacacaggcagagggagaagcaggctcccctcagggag i canFam3.chr6 C 0 I 166 e otoGar3.GL873611 2113765 485 - 8137123 M a score=225700.000000 s hg38.chr7_KI270899v1_alt 52759 32 + 190869 GACAAGGCTCTCGGCGTTTCCTTGTGGATTTA s panTro5.chrUn_NW_015974890v1 4569 30 - 15765 GAC-AGGCTCTCGGCGTTTCCTT-TGGATTTA i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 13687 32 - 432965 GACAAGGCTCTCGGCGTTTCCTTGTGGATTTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 76719 32 + 85365473 GATAAGGCTCTCGGCATTTCCTTGTGGATTTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33916628 32 + 185818997 GACAAGGCTCTCGGCATTTCCTTGTAGATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33532598 32 + 192294377 GACAAGGCTCTCGGCATTTCCTTGTAGATTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4293818 32 - 9440265 GACAAGGCTCTCGGCATTTCCTTGTAGACTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16883337 32 - 21915920 GACAAGGCTCTCGGCATTTCCTTGTAGATTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 23564 32 - 21531802 GACAAGGCTCTCGGCATTTCCTTGTAGATTTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 43506 32 - 2515279 GACAAGGCTCTCGGCATTTCCTTGTAGATTTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 203056 32 + 6586416 GACAAGGCTCTCGGCGTTTCCTTGTAGATTTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146569676 32 - 204313951 GACAAGGCTCTTGCCGTTTCCTCGCCGATTCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 406868 32 - 2125214 GACAAGGCTCTTGCCATTTCCTTGCAGATTTA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 32736 32 + 376347 GACAGGGCTCTCACCGTTTCCTTGCAGATTTA i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2113765 485 - 8137123 M e canFam3.chr6 60966915 166 - 77573801 I a score=3146671.000000 s hg38.chr7_KI270899v1_alt 52791 435 + 190869 TTT-GCTCAGCATGAGTGCCCTGTCAAG-----------------CCACCCAAGGGACAGAGCTTCTGGCTCAGGGACCACGGTTGGCTC-AGCACAGGCAGCCTCTGGAGATGAGAGGGAACCA-GTGGATACCCTTCTATCCCTGCTGGCCACGAGGGGTG--------GCAGTGTCCCAGGTAGAGGTACTTAATAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTATTTTT-CGAGGAGCTTTT--CCATAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACTGGGGCAGAAGCCTCTTCCCT-GCC--TTGTC-TGATGGGGTCTTTACACCT--------TCCTCGGTCA-CTGATGCCAGGTGCTATT-GTTCCTG---CTCAGCCAATGTCTG-GACTGA-GTCCCGAGCCTCATTCCATG-GGCAGTGGCTCTGTC-TCCAGGTGGGGCACATGGAGGCCAAGTCCCAGGGCAGGGCCC s panTro5.chrUn_NW_015974890v1 4599 488 - 15765 TTTGGCTCAGCATGAGTG-CCTGTCAAAAGAGGGCCCCCCGCGCCCCAACCAAGGGACAGAGCTTCTGGCTCAGGGTCCACGGTTGGCTCAAGCACAGGCAGCCTCTGGAGATGAGAGGGAACCATGTGGATACCCTTCTAT-CCTGCTGGGCACGAGCGATGCAGCGGCTACGGTGT-CCAGGT-GGCGTACGTTATAAAGA-GTTGCTTGAATTTATATTTTTCTACTAGAGATTTTATTTTTATGAGGAGCTTTTGCCCATACGCCCATGGCCCTGGGGTTTCAACACCATACACT--GGCAGAAGCCTCGTCCCTAGCC--TTGTCATGATGAGATCTATATACATAATACATAACACCGGTCA-CTGATGC--GGTGCTGTTAGTTCCTGCCTCTAGGCCAATGTCTGCGACTGAGGTCCGGAGCCTCATTCCGTGCGGCAGTGCCTCTGTCTTCCAGGTGGGGCACATGGAGGCCAAGTCCCAGGGCAGGGCCC i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 13719 435 - 432965 TTT-GCTCAGCATGAGTGCCCTGTCAAG-----------------CCACCCAAGGGACAGAGCTTCTGGCTCAGGGACCACGGTTGGCTC-AGCACAGGCAGCCTCTGGAGATGAGAGGGAACCA-GTGGATACCCTTCTATCCCTGCTGGCCACGAGGGGTG--------GCAGTGTCCCAGGTGGAGGTACTTAATAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTATTTTT-CGAGGAGCTTTT--CCATAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACTGGGGCAGAAGCCTCATCCCT-GCC--TTGTC-TGATGGGGTCTTTACACCT--------TCCTCGGTCA-CTGATGCCAGGTGCTATT-GTTCCTG---CTCAGCCAATGTCTG-GACTGA-GTCCCGAGCCTCATTCCATG-GGCAGTGGCTCTGTC-TCCAGGTGGGGCACATGGAGGCCAAGTCCCAGGGCAGGGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 76751 432 + 85365473 TTT-GCTCAGCATCAGTGCCCTGTCAAG-----------------CCACCCAGGGGACAGAGCTTCCGGCTCA-GGACCACGGCTGGCTC-AGCACAGGCAGCCTCTGGAGATGAGCGGGAACCA-GCGGATGCCCTTTGATCCCTGCTGGCCACGATGGGTG--------GCAGAGT-CCAGGTGGAGGTACTTTATAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTGTTTT--CGAGGAGCTTTT--CCATAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACTGGGGCAGAAGCCTCGTCCCT-GCC--TTGTC-TGATGGGGTCTTTACACCT--------TCCTCGGTCA-CTGATGTCGGGTGCTATT-GTTCCTG---CTCGGCCAATGTCTG-GACTGA-GTCCCGAGCCTCATTCCATG-GGCGGTGGCTCTGTC-TCCAGGTGGGGCACATGGAGGCCAAGTCCCAGGGCAAGGCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33916660 435 + 185818997 TTT-GCTCAGCATGAGTGCCCTGTCAAG-----------------CCACCCAAGAGACAGAGCTTCCGGCTCAGGGACCACGGTTGACTC-AGCACAGGCAGCCTCTGGAGGTGAGAGGGAACCA-GGGGATGCCCTTCTGTCCCTGCTGGCCACGAGGGGTG--------GCAGTGTCCCAAGTGGGGGTACTTTATAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTATTTTT-CGAGGAGCTTTT--CCACAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACCGGGGCAGAAGCCTTATCCTT-GCG--TTGTC-TGACAGGGTCTTTACACCT--------TCCTCGGTCA-CTGATGCTGAGTGCTATT-GTTCCTG---CTCAGCCCATATCTG-GACTGA-GTCCCGAGCCTCATTCCATG-GGCAGTGGCTCTGTC-TCCAGGTAGGGCACGTGGAGGCCAAGTCCCAGGGCAGGGCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33532630 435 + 192294377 TTT-GCTCAGCATGAGTGCCCTGTCAAG-----------------CCACCCAAGAGACAGAGCTTCCGGCTCAGGGACCACGGTTGACTC-AGCACAGGCAGCCTCTGGAGGTGAGAGGGAACCA-GGGGATGCCCTTCTGTCCCTGCTGGCCACGAGGGGTG--------GCAGTGTCCCAAGTGGGGGTACTTTATAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTATTTTT-CGAGGAGCTTTT--CCACAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACCGGGGCAGAAGCCTTATCCTT-GCG--TTGTC-TGACAGGGTCTTTACACCT--------TCCTTGGTCA-CTGATGCCGGGTGCTATT-GTTCCTG---CTCAGCCCATATCTG-GACTGA-GTCCCGAGCCTCATTCCATG-GGCAGTGGCTCTGTC-TCCAGGTAGGGCACGTGGAGGCCAAGTCCCAGGGCAGGGCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4293850 435 - 9440265 TTT-GCTCAGCATGAGTGCCCTGTCAAG-----------------CCACCCAAGAGACAGAGCTTCCGGCTCAGGGACTACGGTTGACTC-AGCACAGGCAGCCTCTGGAGGTGAGAGGGAACCA-GGGGATGCCCTTCTGTCCCTGCTGGCCACGAGGGGTG--------GCAGTGTCCCAAGTGGGGGTACTTTATAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTATTTTT-CGAGGAGCTTTT--CCACAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACCGGGGCAGAAGCCTTATCCTT-GTG--TTGTC-TGACAGGGTCTTTACACCT--------TCCTCGGTCA-CTGATGCTGGGTGCTATT-GTTCCTG---CTCAGCCCATATCTG-GACTGA-GTCCCGAGCCTCATTCCATG-GGCAGTGGCTCTGTC-TCCAGGTAGGGCACGTGGAGGCCAAGTCCCAGGGCAGGGCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16883369 435 - 21915920 TTT-GCTCAGCATGACTGCCCTGTCAAG-----------------CCACCCAAGAGACAGAGCTTCCGGCTCAGGGACCATGGTTGACTC-AGCACAGGCAGCCTCTGGAGGTGAGAGGGAACCA-GGGGATGCCCTTCTGTCCCTGCTGGCCATGAGAGGTG--------GCAGTGTCCCAAGTGGGGGTACTTTATAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTATTTTT-CGAGGAGCTTTT--CCACAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACCGGGGCAGAAGCCTTATCCCT-GCG--TTGTC-TGACAGGGTCTTTACACCT--------TCCTCGGTCA-CTGATGCCGGGTGCTATT-GTTCCTG---CTCAGCCCATATCTG-GACTGA-GTCCCGAGCCTCATTCCATG-GGCAGTGGCTCTGTC-TCCAGGTGGGGCACGTGGAGGCCAAGTCCCAGGGCAGGGCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 23596 435 - 21531802 TTT-GCTCAGCATGAGTGCCCTGTCAAG-----------------CCACCCAAGAGACAGAGCTTCCGGCTCAGGGACCACGGTTGACTC-AGCACAGGCAGCCTCTGGAGGTGAGAGGGAACCA-GGAGATGCCCTTCTGTCTCTGCTGGCCACGAGGGGTG--------GCAGTGTCCCTAGTGGGGGTACTTTATAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTATTTTT-CGAGGAGCTTTT--CCACAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACCGGGGCAGAAGCCTTATCCCT-GCG--TTGTC-TGACGGGGTCTTTACACCT--------TCCTCAGTCA-CTGATGCCGGGTGCTATT-GTTCCTG---CTCAGCCCATATCTG-GACTGA-GTCCCGAGCCTCATTCCATG-GGCAGTGGCTCTGTC-TCCAGGTGGGGCACGCGGAGGCCAAGTCCCAGGGCAGGGCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 43538 435 - 2515279 TTT-GCTCAGCATGAGTGCCCTGTCAAG-----------------CCACCCAAGAGACAGAGCTTCCGGCTCAGGGACCACGGTTGACTC-AGCACAGGCAGTCTCTGGAGGTGAGAGGGAACCA-GGGGGTGCCCTTCTGTCCCTGCTGGCCACGAGGGGTG--------GCAGTGTCCCAAGTGGGGGTACTTTGTAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTATTTTT-TGAGGAGCTTTT--CCACAAGCCCA-GGCCCTGGG--TTC-ACACCAT-TACCGGGGCAGAAGCCTTATCCCT-GCG--TTGTC-TGACAGGGTCTTTACACCT--------TCCTCGGTCA-CTGATGCCAGGTGCTATT-GTTCCTG---CTCAGCCCATATCTG-GACTGA-GTCCCGAGCCTCATTCCATG-GGCAGTGGCTCTGTC-TCCAGGTGGGGCACGTGGAGGCCAAGTCCCAGGGCAGGGCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 203088 412 + 6586416 TTT-GCTCAGCGTGAGTGCCCTGTCAAG-----------------GCACCCAAGGGACAGAGCTTCCGGCTCAGGGAC-ACGGTTGACTC-AGCACAGGCAGCCTCCGGAGATGAGA-----------------------GTCCCTGCTGGCCACGAGGGGCG--------GCAGTGTCCCAAGTGGGGGTACTTTATAAAGAGGTTGCTGG---TTTTATTTTTCT-CTAAA----TTATTTTT-CCAGGAGCTTTT--CCACAAGCCCA-GGCCCTGGG--TTC-ACACCGT-CACCGGGGCAGAAGCCTTTTCCCT-GCG--TTGTC-TGACGGGGTCTTTACACCT--------TCCTCGGTCA-CCGATGCTGGGTGCTGTT-GTTCCTG---CTCAGCCCATGTCTG-GATGGA-GTCCCGAGCCTCATTCCCTG-GGCAGTGGCTCTGTC-TCCAGGCGGGGCACACGGAGGCCAAGTCCCGGGGCAGGGCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146569708 429 - 204313951 TTT-GCTCAGCATGAGTGCCCTGTTGAG-----------------CCACCCAAGAGACAGAGCTGCTGGCTCAGGGACCATGGTTGGCTC-AGCACAGACAGCTTCTGCAGGTGAGAGGGAACCA-GTGGATGCCCCTCTATCCCTACTGGTCACAAGGGGTG--------GCAATGTCCCAAGTAGACGTACATTATAAAGAAGCTGCTGG---TTTTATTTTTCT-CTAAA----T--TGTTT-TGAGGAGCTTTT--TCATAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACTAGGGCAGAAGCCTCGACCCT-GCC--TTTTC-TGATGGGGTCTTT--ATCT--------TCCTCGGTCA-CTGATGCCAGGTGCTATT-GTTCCTG---CTCAGCCAATGTCTG-GGCAGA-GTCCCAAGCCCCATTCCATG-GGCAGTG--TTTGTC-TCCAGGTGGGGCACATGGAGGCCAAGCCTCAGGGCAGGGCCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 406900 433 - 2125214 TTT-GCTCAGCATGACTGCCCTGTTGAG-----------------CCACCTAAGGGACAGAGTTGCTGGCTCAGGGATCACGGTTGGCTG-AGCACAGGCAGCCTCTGGAGGTGAGACGGAACCA-ATGGATGCCCCTCTATCCCTGCTGGTCACAAGGGGTG--------GCAGTGTCCCAAGTGGAGGTACTTTATAAAGAAGCTGCTAG---TTTTATTTTTCT-CTAAA----TTATGTTT-TGAAGAGCTTTT--TCATAAGCCCA-GGCCCTGGG--TTC-ACACCAT-CACTAGGGCAGAAGCCTCGTCCCT-GCC--TTGTC-TGATGGGGTCTTTACATCA--------TCCTCGGTCA-CTGATGCCGGGTGCTATT-GTTCCTG---CTCAGCCACTGTCTG-GGCGGA-GTCCCGAGCCTCATTTCATG-GGCAGTG--TTTGTC-TCCAGGTGGGGCACATGGAGGCCAAGCCTCAGGGCAGGGCCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 32768 432 + 376347 TTT-GCTCAGCATGAGTCCCCTGTTGAA-----------------CCACCGAAGGGACAGCGCTGCCGGCTCAGGGACCACAGCTGGCTC-AGCACAGGCAGCCCCTGGAGGTGAGTGGGAACTG-GTGGATGTCCCTCTATCCCTACTGGTCACGA-GGGCG--------GCAGTGTCCCAAGCAGAGGTACTTCATAAAGAAGCTGCTGG---TTTTATTTTTCT-CTAAA----TTATGTTT-TGAGGAGCTTTT--TCATAGGCCCA-GGCCCTGGG--TTC-ACACCAT-CACTAGGGCAGAAGCCTCGTCCCT-GCC--TTGTC-TGATGAGGTCTTTACATCT--------TCCTTGGGCA-CTGATGCCAGGTGCTATT-GTTCCTG---CTCAGCCAACGTCTG-GGCAGA-GTCCCAAGCCTCGTTCCATG-GGCAGTG--TGTGTC-TCCAAGTGGGGCACATGGAGGCCAAGCCTCAGGGCAGGGCCC i aotNan1.NW_018514293v1 C 0 I 5 s canFam3.chr6 60967081 393 - 77573801 CTC-GCTCAGAGTCAGCGTCTGGCCAGG-----------------CCACCCAGG-----GTGCTGCTGGCTCAGGG---------------ACCACAGGCA----CCAGAGGGCAAGGTAGGCAG-GTGGGTGCCC-TCTATGGCCACTGGCCATGAGGGG-G--------GCAGTGTCACAAGAGAAGTTACCTTTTAAGAAGACTATTGA---TTCTGTTTTCCT-TTGAA----TTATATTT-CTGGGAGCTTTT--ATATAATCCCA-GCCCATGGG--ATC-ACACTAT-TTCTGTTAAATAACTCTTGGCACT-GCCATTTGTC-TGATGGAATCATAACATGT--------TTCAAAGTCATCTGgagattggtactatt-attcctg---cttaaccagtgggaa-aaccaa-gtcacaAGCTTC------------------TCTGCT-TCCCAGAAAG---TACCAGGGCCAAGTCTTGAGATAGGGTCC i canFam3.chr6 I 166 C 0 e otoGar3.GL873611 2113765 485 - 8137123 M a score=630569.000000 s hg38.chr7_KI270899v1_alt 53226 111 + 190869 ACGGTGGGCCTGGTCTTACGGGTGGTGAGTCAGCT-GGGCCGGCTGAGAGAGAAGAAAA---TGAGCGGAACCAGGAGC--AAGACAGGTGGAGGA-TGGGCAGAAGACAGGGTG-GCC s panTro5.chrUn_NW_015974890v1 5087 119 - 15765 ACGGTGGGCCTGGTCTTACGGGTGTGTTGTCAGCTGGGGCCGGCTAAGAGAGAAGAAAAATGTGGGCGGAACCAAGAGCCAAGGACAGGTGGAGGATTGGGCAGGAGACAGGGTGTGCC i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 14154 111 - 432965 ACGGTGGGCCTGGTCTTACTGGTGGTGAGTCAGCT-GGGCCGGCTGAGAGAGAAGAAAA---TGAGCGGAACCAGGAGC--AAGACAGGTGGAGGA-TGGGCAGGAGACAGGGTG-GCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 77183 111 + 85365473 ACGGTGGGCCTGGTCTTACTGGTGGTGAGTCAGCT-GGGCCGGCTGAGAGAGAAGAAAA---TGAGCGGAACCAGGAAC--ACGACAGGTGGAGGA-TGGGCAGGAGCCAGGGTG-GCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33917095 111 + 185818997 ACGGTGGGCCTGGTCTTGCTGGTGGTAAGTCCACT-GGGCCGGCTGAGAGAGACGAAAA---TGAGCGGGACCAGGAGC--AAGACAGCGGGAGGA-CGGGCAGGAGCCAGGGTG-GCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33533065 111 + 192294377 ACGGTGGGCCTGGTCTTGCTGGTGGTAAGTCCACT-GGGCCGGCTGAGAGAGACGAAAA---TGAGCGGGACCAGGAGC--AAGACAGCGGGAGGA-CGGGCAGGAGCCAGGGTG-GCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4294285 111 - 9440265 ACGGTGGGCCTGGTCTTGCTGGTGGTAAGTCCACT-GGGCCGGCTGAGAGAGACGAAAA---TGAGCGGGACCAGGAGC--AAGACAGCGGGAGGA-CGGGCAGGAGCCAGGGTG-GCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16883804 111 - 21915920 ACGGTGGGCCTGGTCTTGCTGGCGGTGAGTCCACT-GGGCCGGCTGAGAGAGACCAAAA---TGAGCGGGATCAGGAGC--AAGACAGCGGGAGGA-CGGGCAGGAGCCAGGGTG-GCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 24031 111 - 21531802 ACGGTGGGCCTGGTCTTGCTGGTGGTGAGTCCACT-GGGCCGGCTGAGAGAGACGAAAA---TGAGCAGGACAAGGAGC--AAGACAGCGGGAGGA-CGGGCAGGAGCCAGGGAG-GCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 43973 111 - 2515279 ACGGTGGGCCTGGTCTTGCTGGTGGTGAGTCCACT-GGGCCGGCTGAGAGAGACCAAAA---TGAGCGGGACCAGGAGC--AAGACAGCGGGAGGA-CGGGCAGGAGCCAGGGTG-GCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 203500 111 + 6586416 ACGGTGGGCCTGGTCTTGCTGGTGGTGAGTCCGCT-GGGCCGGCTGAGAGAGAATAAAA---TGAGCGGCACCAGGAGC--AAGACAGCTGGAGGA-TGGGCAGGAGCCAGGGTG-GCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146570137 108 - 204313951 ATGGCGGGCATGGTCTTGCTGATGGTGAGTCAACT-GGGCTGACAGAGAG---AGAAAA---TGAGTGGGATCAGGAAC--AAGATAGATGGAGGA-TGGACAGGAGCTGGGGTG-GCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 407333 111 - 2125214 ATGGTGGGCCTGGTCTTGCTGACGGTGAGTCAACT-GGACCGGCAGAGAGAGAAGAAAA---TGAGTGGGATCAGGAGC--AAGATAGGTGGAGGA-TGGACAGGAACTGGGGTG-CCC i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60967474 69 - 77573801 -AAGGGGTCTTTGTCTTGCTGGGGATCAAGCATCT-GGGTAGGCCAAAAGGGAGGGGGA-------------GACAGCC--AAGTC--------------------------------- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2113765 485 - 8137123 M e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=1442431.000000 s hg38.chr7_KI270899v1_alt 53337 249 + 190869 TCCTCAGGTGGAGAGATCTTGAGGGCCATT-TTT----------CAT--GCCACCTCCCTCCACAAATC-----------------TGCCCACGGCTCCCGATAGCCACGCTCTCCA--GCACC-------TGCCCTTTCAA----ACTCCA-GGGCA-AGCTCCAGATATCA-CCACACTGACCATCTA-AAGGGAG----CTTG--GTTAGCAGTGAATACGTGCCCGTGA-CCCTGTG-GGCTCGGGAGA--CCCCCATGGGGCTTTCCTGCTCCCTTGGGTAGGGGAGGCTCACGCCTGTGG s panTro5.chrUn_NW_015974890v1 5206 251 - 15765 TCCTCA-GTGGAGAGATCTTGAGGGCCATTGTCT----------CAC--GCCACCTCCTCAAAAAAATC-----------------TGCCCACGGCTCTCGATAGCCACGCTCTCCA--GCACC-------TG-CCTTTC-A----ACTCCAGGGGCATAGCTCAAGATGTCACCCACACTGACCATCTA-ATGGGAG----CTTGGCGTTAGCAGTG-ATACGTCGCCGTGACCCCTGTGCGGCTCAGGAGA--CCCCCATGGGGCTTTCCTGCT-CCTTGGGTAGGGGA-GCTCATGCCTGTGG i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 14265 240 - 432965 TCCTCAGGTGGAGAGATCTTGAGGGCCATT-TTT----------CAT--GCCACCTCCCTCCACAAATC-----------------TGCCCACGGCTCCTGATAGCCATGCTCTCCA--GCACC-------TGCCCTTTCAA----ACTCCA-GGGCA-AGCTCCAGATATCA-CCACACTGACCATCTA-AAGGGAG----CTTG--GTTAGCAGTGAATACGTGCCCGTGA-CCCT----------GGAGA--CCCCCATGGGGCTTTCCTGCTCCCTTGGGTAGGGGAGGCTCACGCCTGTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 77294 246 + 85365473 TCCTCAGGT--AGAGATCTTGAGGGCCATT-TCT----------CAC---CCACATCCCTCCACAAATC-----------------TGCCCACGGCTCCCGATAGCCACGCTCTGCA--GGACC-------TGCCCTTTCAA----ACTCCA-GGGCA-AGCTCCAGATATCA-GCACACTCACCATCTA-AAGGGAG----CTTG--CTTAGCAGTGAATAAGTGCCCGGGA-CCCTGTG-GGCTCAGGAGA--CCCCCATGTGGCTTTCCTGCTCCCTTGGGTGGGGGAGGCTGACGCCTGTGG i nomLeu3.chr20 C 0 M 228 s rheMac8.chr3 33917206 247 + 185818997 TCCTCAGGT--GGAGATCTTGAGGGCCAGT-TCT----------CAC--GCCACATCCCTCCACAAATC-----------------CGCCCACGGGTCCCGATGGCAACGCTCTCCA--GGACC-------TGCCCTTTCAA----ACTCCA-GGGCC-AGCTCCAGATATCA-CCACACTGGCCATCTA-AAGGGAG----CTCG--GTGAGCAGTGAAGAAGTGCCTGTGA-CACTGTG-GGCTCAGGAGA--CCCCCATGTGGCTTTCCTGCTCCCTTCGGTAGAGGAGGCTCACGCCTGTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33533176 247 + 192294377 TCCTCAGGT--GGAGATCTTGAGGGCCAGT-TCT----------CAC--GCCACATCCCTCCACAAATC-----------------CGCCCACGGGTCCCGATGGCAACGCTCTCCA--GGACC-------TGCCCTTTCAA----ACTCCA-GGGCC-AGCTCCAGATATCA-CCACACTGACCATCTA-AAGGGAG----CTCG--GTGAGCAGTGAAGAAGTGCCTGTGA-CCCTGTG-GGCTCAGGAGA--CCCCCATGTGGCTTTCCTGCTCCCTTCGGTAGAGGAGGCTCACGCCTGTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4294396 247 - 9440265 TCCTCAGGT--GGAGATCTTGAGGGCCAGT-TCT----------CAC--GCCACATCCCTCCACAAATC-----------------CGCCCACGGGTCCTGATGGCAACGCTCTCCA--GGACC-------TGCCCTTTCAA----ACTCCA-GGGCC-AGCTCCAGATATCA-CCACACTGACCATCTA-AAGGGAG----CTCG--GTGAGCAGTGAAGAAGTGCCTGTGA-CCCTGTG-CGCTCAGGAGA--CCCCCATGTGGCTTTCCTGTTCCCTTTGGTAGAGGAGGCTCACGCCTGTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16883915 247 - 21915920 TCCTCAGGT--GGAGATCTTGAGGGCCAGT-TCT----------CAC--GCCACATCCCTCCACAAATC-----------------CGCCCACGGGTCCCGATGGCAACGCTCTCCA--GGACC-------TGCCCTTTCAA----ACTCCA-GGGCC-AGCTCCAGATATCA-CCACACTGACCATCTA-AAGGGAG----CTCG--GTGAGCAGTGAAGAAGTGCCTGTGA-CCCTGTG-GGCTCAGGAGA--CCCCCATGTGGCTTTCCTGCTCCCTTCGGTAGAGAAGGCTCACGCCTGTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 24142 249 - 21531802 TCCTCAGGT--GGAGATCTTGAGGGCCAGT-TCT----------CAC--GTCACATCCCTCCACAAATC-----------------CGCCCACGGCTCCCGATGGCAACGCTCTCCA--GGACC-------TGCCCTTTCAA----ACTCCA-GGGCC-AGCTCCAGATATCA-CCACACTGACCATCTA-AAGTGAG----CTCG--GTGAGCAGTGAAGAAGTGCCTGTGA-TCCTGTG-GGCTCAGGAGACCCCCCCATGTGGCTTTCCTGCTCCCTTCGGTAGAGGAGGCTCATGCCTGTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 44084 247 - 2515279 TCCTCAGGT--GGAGATCTTGAGGGCCAGT-TCT----------CAC--GCCACATCCCTCCACAAATC-----------------CGCCCACGGGTCCCGATGGCAACGCTCTCCA--GGACC-------TGCCCTTTCAA----ACTCCA-GGGCC-AGCTGCAGATATCA-CCACACTGACCATCTA-AAGGGAG----CTCG--GTGAGCAGTGAAGAAGTGCCTGTGA-CCCTGTG-GGCTCAGGAGA--CCCCCATGTGGCTTTCCTGCTCCCTTCGGTAGAGGAGGCTCACGCCTGTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 203611 247 + 6586416 TCCTCAGGT--GGGGATGCTGAGGGCCAGT-TCT----------CAC--GTCGCATCCCCCCACAAATC-----------------CACCCACAGCTCCCGATGGCAACGCTCTCCA--GGACC-------TACCCTTTCAG----ACTCCA-GGGCC-AGCTCCAGATATTG-CCACACTGACCATCTA-AAGGGAG----CTTG--GTGAGCAGTGAGTAAGTGCCTGTGA-CCCTGTG-GGCTCAGGAGA--CCCCCACGTGGCTTTCCTGCTCCCTTCGGTAGGGGAGGCTCACGCCTGTGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146570245 273 - 204313951 TCCTCAGGT--TGAGATCTTAAGGGCCAGT-TCTCTTTCCTCACCAT--GCCATATCACTCCACAAATTTGCCCACAGCATCCCCATGCCCACAGCTCCTGATGGCCATGCTCTCCA--GGACC-------TGCCCTTTTAA----ACTGCA-GGGTC-AGTTCTTGCTGTCA-CCACAATGACCATCTA-AAGGGAG----ATTG--GTTAGCAGTGAATAAATGCCCATGA-TCTGGTG-GGCCCAAGAGA---TCCCATGTGGCTTTCCTGCTCCCTTGAGTAGGGGAGGCCCACCCCTGTGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 407444 274 - 2125214 TCCTCAGGT--TGAGATCTTGAGGGCCAGT-TCTCTTTCCTCACCAT--GACACATCCCTCCACAAATCTGCCCACAGCTTCCCCATGCCCACAGCTCCTGATGGCCATGCTCTCCA--GGACC-------TGCCCTTTTAA----ACTGCA-GGGTC-AGCTCTTGCTGTCA-CCACAATGACCCTCTA-AAGGGAG----CTTG--GTTAGCAGTGAATAAACGCCCATGA-CCTGGTG-GGCTCAAGAGA--GCCCCATGTGGCTTTCCTGCTCCCTTGAGTAGGGGAGGCTCATCCCTGTGC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2114251 254 - 8137123 TCCTCAAGC--CGAGATTGTGAAGATCAGT-TCTTTCTCCTCACTGT--GTCATGTCCCTCCAC-ACTC-----------------TCCCAACAGCACCT-----CTGTGTCCCACATCAGACCACTCGTGTGGCCACTCA-------TCCA-AGGTC-TGC-CCTGCTGTCA-TGACACCGACTCTATATATGAGAG----TCTG--GCTGGCACCAAATAAGGGCCTGTGG-CCTTGTG-GGCTCAGAAAA--CTCCCACATGGCTCTCCTGCTCCCTTGGGT-GGGGAGGTTCCT--TTGTGG i otoGar3.GL873611 M 485 C 0 s canFam3.chr6 60967543 195 - 77573801 -------------------------CCTTT-CCT----------GACCATCAGCATCACTCCAC----------------------TGTC------TCCC----ACCACCCTCCCCA--GGACC-------TG-----TCAAGGATACTTGG-GGTCA-AAAGTCTGCCATCA-CCACATTTACCATCTG-AATAAAGAAGCCTCA--GTTGGCATCAGGAAAATGCCCC--A-TTCTGTG-GGCTTCCAAGC--CTCATGTGT-GCTTTCCTTCTCTCT-------GAAGGGCTCA--------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=1174055.000000 s hg38.chr7_KI270899v1_alt 53586 237 + 190869 -----------------GTCGGCACCAGTCTGCTTCTCATGTCCCTCCTCACCTCCCAGGCCCCTGGCCCCGGACAG-GATAGGT-AGAGGCATTTCCTCTTTT-CTG--CCTTGACTCAC-TTCACAGAGAGGGGCCTCCCCCAC--------GTG------------CCTGGCCCCACTGCCAA------CCCACCACGTGCCGGCCTTGG---AGTATGGG--------------GGAATGTGCTTTGCTGCCATTTCTGAACCTGAGGGAGCTTATC----TTTCTT--CTGAGAGCCCTGTTCT----- s panTro5.chrUn_NW_015974890v1 5457 252 - 15765 -----------------GTCGGCACCAGTCTGCTTCCCATGTCCCTCCTCACCTCTCA-GCCCCTGGCCCCGGACAGCGATAAGTAAGAGGCATTTCCTCTTTTCCTG--CCTTGACTCAC-TTCACAGAGAGGGG-CTCCCCCAC--------GGA------------TTGCGGCCCACTGCCAA--------CACCATGTGCCGGCCTTGGCCCAGTATGGGTCTCCGCGCACGCCGGAATGTGCTTTGC--GCATTGCTGAACCTGAGGGAGCTTATC----TTTTTTTCCTGAGAG-CCTGATTT----- i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 14505 237 - 432965 -----------------GTCGGCACCAGTCTGCTTCCCATGTCCCTCCTCACCTCCCAGGCCCCTGGCCCCGGACAG-GATAGGT-AGAGGCATTTCCTCTTTT-CTG--CCTTGACTCAC-TTCACAGAGAGGGGCCTCCCCCAC--------GTG------------CCTGGCCCCACTGCCAA------CCCACCACGTGCCGGCCTTGG---AGTATGGG--------------GGAATGTGCTTTGCTGCCATTTCTGAACCTGAGGGAGCTTATC----TTTCTT--CTGAGAGCCTTGTTCT----- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33917453 237 + 185818997 -----------------CTTGGCACCAATCTGTTTCCTGTGTCCCTCCTCACATCCCAGGCCCCTGGCCCTGGACAG-AAGAGGT-AGAGGCATGTCCTCTTTT-CTG--CATTGACCCAC-TTCACAGAGAAGCACCTCCCTCAC--------CTG------------CCTGGCCCCACTGCTAA------CCCGCCAGATGCTGTCCTTGG---AGTATGGG--------------GGAATGTGCTTTGCTGCCATTTCTGAACCTGAAGAAGTTTATC----TTTCCT--CTGAGAGCCCTGATCT----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33533423 237 + 192294377 -----------------CTTGGCACCAATCTGTTTCCTGTGTCCCTCCTCACATCCCAGGCCCCTGGCCCTGGACAG-AAGAGGT-AGAGGCATGTCCTCTTTT-CTG--CATTGACCCAC-TTCACAGAGAAGCACCTCCCTCAC--------CTG------------CCTGGCCCCACTGCTAA------CCCGCCAGATGCTGTCCTTGG---AGTATGGG--------------GGAATGTGCTTTGCTGCCATTTCTGAACCTGAAGAAGTTTATC----TTTCCT--CTGAGAGCCCTGATCT----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4294643 237 - 9440265 -----------------CTTGGCACCAATCTGTTTCCTGTGTCCCTCCTCACATCCCAGGCCCCTGGCCCTGGACAG-AAGAGGT-AGAGGCATGTCCTCTTTT-CTG--CATTGACCCAC-TTCACAGAGAGGCACCTCCCTCAC--------CTG------------CCTGGCCCCACTGCTAA------CCCGCCAGATGCTGTCCTTGG---AGTATGGG--------------GGAATGTGCTTTGCTGCCATTTCTGAACCTGAAGAAGTTTATC----TTTCCT--CTGAGAGCCCTGATCT----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16884162 237 - 21915920 -----------------CTTGGCACCAATCTGTTTCCTGTGTCCCTCCTCACATCCCAGGCCCCTGGCCCTGGACAG-AAGAGGT-AGAGGCATGTCCTCTTTT-CTG--CATTGACCCAC-TTCACAGAGAGGCGCCTCCCCCAC--------CTG------------CCTGGCCCCACTGCTAA------CCCGCCAGATGCTGTCCGTGG---AGTATGGG--------------GGAATGTGCTTTGCTGCCATTTCTGAACCTGAAGAAGTTTATC----TTTCCT--CTGAGAGCCCTGATCT----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 24391 237 - 21531802 -----------------CTTGGCACCAATCTGTTTCCTGTGTCCCTCCTCATATCCCAGGCCCCTGGCCCTGGACAG-AAGAGGT-AGAGGCAAGTCCTCTTTT-CTG--CTTTGACCCAC-TTCACAGAGAGGTGCCTCCCCCAC--------GTG------------CCTGACCTCACTGCTAA------CCCGCCAGATACTGTCCTTGG---AGTATGGG--------------GGAATGTGCTTTGCTGCCATTTCTGAACCTGAAGAAGTTTATC----TTTCCT--CTGAGAGCCCTGATCT----- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 44331 237 - 2515279 -----------------CTTGGCACCAATCTGTTTCCTGTGTCCCTCCTCACATCCCAGGCCCCTGGCCCTGGACAG-AAGAGGT-AGAGGCATGTCCTCTTTT-CTG--CTTTGACCCAC-TTCACAGAGAGGCGCCTCCCCCAC--------CTG------------CCTGGCCCCACTGCTAA------CCCGCCAGATGCTGTCCTTGG---AGTATGGG--------------GGAATGTGCTTTGCTGCCATTTCTGAACCTGAAGAAGTTTATC----TTTCCT--CTGAGAGCCCTGATCT----- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 203858 237 + 6586416 -----------------CTTGGCACCAATCTGCTTCCTGTGGCCCTCCTCACATCCCAGGCCCCTGGCCCTGGACAT-GGGAGGT-AGAGGCAGGTCCTCTTTT-CTG--CCTTGACCCAC-TTCACAGAGAGGCGCCTCCCCCAC--------GTG------------CCTGGCCCCACTGCTAA------CCTGCCAGGTGCTGTCCTTGG---AGTGTGGG--------------GGAATGTGCTTTGCTGCCATTTCTGAACCTGAGGAAGTTTATC----TTTCCT--CTGACAGCCCTGTTCT----- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146570518 218 - 204313951 -----------------GTTGGTGCCAATCTGCTTCCAGTGTCCCTCCTCACATCCCAGGACCCTGGCCTGGGACAG-GGTAGGT-AGAGGCATTTCCTCTTTT-CTA--CCTTGACCCAC-CTCACAGAGAGGGACCTCC----------------------------------CCCACTGCCAA------CCCGCCAGAT-----CCTTGG---GGTATGGG--------------GGAATATGCTTAGCTGCCATTTCTGAACTTGTGGGAGCTTATC----TTTCTT--CTGAGAGCTCTGTTCT----- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 407718 223 - 2125214 -----------------GTTGGTGTCGATCTGCTTCCCATGTCCCTCCTCACATCCCAGGCCCCTGGCCTGGGACAG-GGTAGGT-AGAGGCATTTCCTCTTTT-CTA--CCTTGACCCAC-CTCACAGAGAGGGACCTCC----------------------------------CCCACTGCCAA------CCAGCCAGGTGCCGCCCTTGG---GGTACTGG--------------GAAATGTGCGTAGCTGCCATTTCTGAACTTGAGGGAGTTTATC----TTTCTT--CTGAGAGCTCTGTTCT----- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2114505 215 - 8137123 -----------------GTTGGTGCCA-CCTGCTTCCCACCTCCTCCTCCGTC-----GGTGCCTCTCCTCCCACCA--------------------CCCACCC-TGG--CCCTGACCCACATCCACAGC-AGGGGCCTCTCGCATGCCCAACAGTG------------CCTG--CCTTCTGTTGA------TGTGTATGACACTGGCTTGGG---GGCACAGA--------------GG-CTGTGCTTTGCTGCCATTTCTGAACGTG-GGGAGCCTAACACGATTGCTC--CT------CCTGTTCT----- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60967738 259 - 77573801 CTGCCCCCCCCCCCATGTTTGGTGCCAACCTGCTTCC-------------------CAAGCCCCTGGCCCTGCCTGA-GGCAGGT-GGAAGCCCTTCTCCTTTG-CCAACCCTGGAAATTC-TCCATGAATGGTGACTGCTGTCAC--------CTGGAATCAGCCCCACTCAGCCCCATTGCCAAGTGCCACCCACCCAGCACTCTCCTTAG---AGCACAGA--------------GTAG-GTACTTTGCTGCCATTTCAGAACTTTGGGAAGCTTCTC----TTTCTT--CCAACATTGTTGTTTCTGCTT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I e nomLeu3.chr20 77540 228 + 85365473 M a score=2688603.000000 s hg38.chr7_KI270899v1_alt 53823 414 + 190869 AGGTA-GGCAAGCTCCTGTATA-CTTTACTG-CCATTTG--TTCAAGTTC-CAATTA-TGGAAGGGACCCTT---AGTGAAAA-GAGCTTGGTGCTGAGGTGTAATTCTCT-GAGCAC-ACTGGGCCTGAGAGCAGCCTTGCAATGACAGGGTTTTCCGGCTCGAAGGAGCCGTCCCCGAGTCCTTTCCACTGGTCTTGGAAGGGAAGAGTC-TGTGTCTC-----GGCGACAGA--GGGTG-TCTTTGTGGATAAATGAGGCCTCTTTGTGC-ATGG-CCTGCCCAACAGAGGCCACAG-G-----------------------------------CCGGACACATGCTGACCTTGGACACC-TTCCA--TCTCTGGGGTCAGGGCTGGGACCAGAGGAGATGCCGAGGCCAAGACTAAAGCCCCCC-AAAGGTCT-TCTGGGCAACTCCCCG-TTCAGGGCTAAAAGTCTCCC-TGTG-A s panTro5.chrUn_NW_015974890v1 5709 424 - 15765 AGGTACGGCAAGCCCCTG-ATACCTTTACTGCCCATTTGCTTCCAAGTTCACAGTTA-TGGAA-GGACCCTT---AGTGAAAACGAGCTTGGTG-TGAGGTGTAATTCTCTGGAGCACGACTGGG-CTGAGAGCAG-CTTGCAATGACCGA--TTTTCTGCTCGATGAGGCTGT-CCCAAGTCCTTTCCACTGGTCTTGGAAGGGAAGAGTCTTGTGTCTC-----GGGACCAGA--CGGTGTTCTCTGTGGATAAATGAGGCCTTTTTGTGCGATGG--CTGCCCAACAGAGGCCACAGCG-----------------------------------CCAGAGACATGCTGACC-TGGACACCTTTCCAACTCTCTGGGGTCAGGGCTCGGACCAGA-GAGATGCGAAGGCCAAGACTAAAGGGCCCCAAAAGGTCTCTCAGGGCAACTCCCCGATTCAGGGCTAAAAGTCTCCCTTGTGAA i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 14742 413 - 432965 AGGTA-GGCAAGCTCCTGTATA-CTTTACTG-CCATTTG--TTCAAGTTC-CAATTA-TGGAAGGGACCCTT---AGTGAAAA-GAGCTTGGTGCTGAGGTGTAATTCTCT-GAGCAC-ATTGGGCCTGAGAGCAGCCTTGCAATGACAGGGTTTTCTGGCTCAAAGAAGCCATCCCCGAGTCCTTTCCACTGGTCTTGGAAGGGAAGAGTC-TGTGTCTC-----GGCGACAGA--GGGTG-TCTTTGTGGATAAATGAGGCCTCTTTGCGC-ATGG-CCTGCCCAACAGAGGCCACAG-G-----------------------------------CCGGACACATGCTGACCTTGGACACC-TTCCA--TCTCTGGGGTCAGGGCTGGGACCAGAGGAGATGCCGA-GCCAAGACTAAAGCCCCCC-AAAGGTCT-TCTGGGCAACTCCCCG-TTCAGGGCTAAAAGGCTCCC-TGTG-A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 77770 415 + 85365473 AGGTA-GGCGAGCTCCTGTAGA-CTTTACTG-CCATTTG--TTCAAGCTC-TAATTACTGGAAGGGACCTTT---AGTGAAAA-GAGCTTGGTGCTGAGGTGTAATTCTCT-GAGCAC-ACGGGCCCTGAGAGCAGCCTTGCAATGACAGGATTTTCCGGCTCGAAGAAGCCGTCCCCGAGTCCTTTCCACTGGTCTTGGAAGGGAAGAGTC-TGTGTCTC-----GGTGATGGA--GGGTG-TCTTTGTGGATAAATGAGGCCTCTTTGTGC-ACGG-CCTGCCCAGCAGAGGCCACAG-G-----------------------------------CCGGAGACATGCAGATCTCGGACACC-TTCCA--CCTCTGGGGTCAGGGCTGGGACCAGAGGAGATGCCGAGGCCAAGACTAAAGCCCCCC-AAAGGTCT-TCTGGGCAACTCCCCA-TGCAGGGCTCAAAGTCTCCC-TGTG-A i nomLeu3.chr20 M 228 C 0 s rheMac8.chr3 33917690 407 + 185818997 AGGTA-GGCGAGCTCCTGTATA-CTTTAGTG-CCATTTG--TTCAAGCTC-TAATTA-TGGAAGGGACTTTT---AGCGAAAA-GAGCTTGGTGCTGAGGTGTAATTCTCT-GAGCAC-ACTGGACCTGAGAGCAGCCTTGCAGTTACAGGGTTTTCTGGCTCAAAGGAGCA-------AGTCCTTTCCAGTCGTCTCGGAAGGGAAGAGTC-TGTGTCTC-----GGTGATGTA--GGGTG-TCTTTGGGGATAAATGAGGTCCCTTTGTGC-ACGG-CCTGCCCAGCAGAGGCCACAG-G-----------------------------------CCAGAGACATGCAGATCTTGGACACC-TTCCC--TCTCTGGGGTCAGGACTGGGACCAGAGGAGATGCCAAGGCCAAGACTAAAGGCCCCC-AAAGGTCT-TCTGGGTGACTCCCCA-TCCAGGGCTGAAAGTCTCCC-TGTG-A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33533660 407 + 192294377 AGGTA-GACGAGCTCCTGTATA-CTTTAGTG-CCATTTG--TTCAAGCTC-TAATTA-TGGAAGGGACTTTT---AGCGAAAA-GAGCTTGGTGCTGAGGTGTAATTCTCT-GAGCAC-ACTGGACCTGAGAGCAGCCTTGCAGTTACAGGGTTTTCTGGCTCAAAGGAGCA-------AGTCCTTTCCAGTCGTCTCGGAAGGGAAGAGTC-TGTGTCTC-----GGTGATGTA--GGGTG-TCTTTGGGGATAAATGAGGTCCCTTTGTGC-ACGG-CCTGCCCAGCAGAGGCCACAG-G-----------------------------------CCAGAGACATGCAGATCTTGGACACC-TTCCC--TCTCTGGGGTCAGGACTGGGACCAGAGGAGATGCCAAGGCCAAGACTAAAGGCCCCC-AAAGGTCT-TCTGGGTGACTCCCCA-TCCAGGGCTGAAAGTCTCCC-TGTG-A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4294880 407 - 9440265 AGGTA-GGCGAGCTCCTGTATA-CTTTAGTG-CCATTTG--TTCAAGCTC-TAATTA-TGGAAGGGACTTTT---AGCGAAAA-GAGCTTGGTGCTGAGGTGTAATTCTCT-GAGCAC-ACTGGACCTGAGAGCAGCCTTGCAGTTACAGGGTTTTCTGGCTCAAAGGAGCA-------AGTCCTTTCCAGTCGTCTCGGAAGGGAAGAGTC-TGTGTCTC-----GGTGATGTA--GGGTG-TCTTTGGGGATAAATGAGGTCCCTTTGTGC-ACGG-CCTGCCCAGCAGAGGCCACAG-G-----------------------------------CCAGAGACATGCAGATCTTGGACACC-TTCCC--TCTCTGGGGTCAGGACTGGGACCAGAGGAGATGCCAAGGCCAAGACTAAAGGCCCCC-AAAGGTCT-TCTGGGTGACTCCCCA-TCCAGGGCTGAAAGTCTCCC-TGTG-A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16884399 407 - 21915920 AGGTA-GGCGAGCTCCTGTATA-CTTTAGTG-CCATTTG--CTCAAGCTC-TAATTA-TGGAAGGGACTTTT---AGCGAAAA-GAGCTTGGTGCTGAGGTGTAATTCTCT-GAGCAC-ACTGGACCTGAGAGCAGCCTTGCAGTTACAGGGTTTTCTGGCTCAAAGGAGCA-------AGTCCTTTCCAGTCGTCTCGGAAGGGAAGAGTC-TGTGTCTC-----GGTGATGGA--GGGTG-TCTTTGGGGATAAATGAGGTCCCTTTGTGC-ACGG-CCTGCCCAGCAGAGGCCACAG-G-----------------------------------CCAGAGACATGCAGATCTTGGACACC-TTCCC--TCTCTGGGGTCAGGACTGGGACCAGAGGAGATGCCAAGGCCAAGACTaaaggccccc-aaaggtct-tctgggtgacccccca-tccagggctgaaagtctccc-tgta-a i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 24628 407 - 21531802 AGGTA-GGCGAGCTCCTGTATA-CTTTAGTG-CCATTTG--TTCAAGCTC-TAATTA-TGGAAGGGACTTTT---AGCAAAAA-GAACTTGGTGCTGAGGTGTAATTCTCT-AAGCAC-ACTGGACCTGAGAGCAGCCTTGCAGTTACAGGGTTTTCCGGCTCAAAGGAGCA-------AGTCCTTTCCAGTCGCCTTGGAAGGGAAGAGTC-TGTGTCTC-----GGTGATGGA--GGGTG-TCTTTGGGGATAAATGAGGTCCCTTTGTGC-ACGG-CCTGACCAGCAGAGGCCACAG-G-----------------------------------CCACAGACATGCAGATCTTGGACACC-TTCCC--TCTCTGGGGTCAAGGCTGGGACCAGAGGAGATGCCAAGGCCAAGACTAAAGGCCCCC-AAAGGTCT-TCTGGGTGACTCCCCA-TCCAGGACTGAAAGTCTCCC-TGTG-A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 44568 407 - 2515279 AGGTA-GGCGAGCTCCTGTATA-CTTTGGTG-CCATTTG--CTCAAGCTC-TAATTA-TGGAAGGGACTTTT---AGCGAAAA-GAGCTTGGTGCTGAGGTGTAATTCTCT-GAGCAC-ACTGGACCTGAGAGCAGCCTTGCAGTTACAGTGTTTTCTGGCTCAAAGGAGCA-------AGTCCTTTCCAGTCGTCTCGGAAGGGAAGATTC-TGTGTCTC-----GGTGATGGA--GGGTG-TCTTTGGGGATAAATGAGGTCCCTTTGTGC-ACGG-CCTGCCCAGCAGAGGCCACAG-G-----------------------------------CCAGAGACATGCAGATCTTGGACACC-TTCCC--TCTCTGGGGTCAGGACTGGGACCAGAGGAGATGCCAAGGCCAAGACTAAAGGCCCCC-AAAGGTCT-TCTGGGTGACTCCCCA-TCCAGGGCTGAAAGTCTCCC-TGTG-A i manLeu1.NW_012101810v1 C 0 I 1612 s colAng1.NW_012117710v1 204095 414 + 6586416 AGGTA-GGTGAGCTCCCGTATA-CTTTAGTG-CCATTTG--TTCAAGCTC-TAATTA-TGGAAGGGACTTTT---AGCGAAAA-GAGCTTGGTGCTGAGGTGTAATTCTCT-GAGCAC-ACTGGGCCTGAGAGCAGCCTTCCCGTTACAGGGTTTTCTGGCTCAAAGGAGCAGTCCCCGAGTCCTTTCCACTCGTCTTGGAAGGGAAGAGTC-TGTGTCTC-----AGTGATGGA--GGGTG-TCTCTGGGGATAAATGAGACCTCTTGGTGC-ACGG-CCTGCCCAGCAGAGGCCACAG-G-----------------------------------CCAGAGACATGCAGATCTTGGACACC-TTCCC--TCTCTGGGGTCAGGGCTGGGACCAGAGGAGACGCCAAGGCCAAGACTAAAGCCCCCC-AAAGGTCT-TCTGGGCGACTCCCCA-TCCAGGGCGGAAAGTCTCCC-TGTG-A i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146570736 397 - 204313951 AGATA-GGTGAGCTCCTGTATG-CTTTACTG-CCATTTT--TTCAAGCTC-TGATTC-TGGAGGGGGGCTTT---AATGAAAA-GAGCTTGGCACTGAGGTGTAATTCTCT-GAGCAC-ACTGGACCTGAGAGCAGCTTTGCAATTAGAGGACTTTCTGGCTCGAAGGATCAGGCCCTGAGTTCCTTCCACTGGTCTTGGAAGGGAAGGGTC-TGTGTCTC-----AGTGCTGCA--GGGTG-TCTTCGTGGATAAATGAGGCCCCTTTGTGC-ACGA-CCTGCCCAGCAGAGGCCACAG-G-----------------------------------GTTGGAGCATGCAGATCTTAGAAACC-TTCAA--TCTCTGGGGTCAGT-CTAAGACCAGAGGAAATGCTGAGGCCAAGACTAAAGCCCCCA------------------ACTCCTTA-TTCAGGGCTAAAAGTCTCCC-TGTG-A i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 407941 397 - 2125214 AGATA-GGCGAGCTCCTGTATG-CTCTATCG-TCATTTT--TTCAAGCTC-TGATTA-TGGAGGGGGGCTGT---AATGAAAA-GAGCTTGGCACTGAGGTGTAATTCTCT-GAGCAC-ACTGGACCTGAGAGCAGCCTTGCAATTAGAGGGCTTTCTGGCTCGAAGGAGCAGGCCCTGAGTTCCTTCCACTGGTCTTGGAAGGGAAAGGTC-TGTGTCTC-----AGTGCTGCA--GTGTG-TCTTTGTGGATAAATGAGTCCCCTTTGTGC-ATGG-CCTGCCCAGCAGAGGCCACAG-G-----------------------------------GCTGGAGCATGCAGATCTTGGACACC-TTCGA--TCTCTGGAGTCTGG-CTAGGACCACAGGAAATGCTGAGACCAAGACTAAAGTCCCCA------------------ACTCCCTA-TTCAGGGCTAAAAGTCTCCC-TGTG-A i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2114720 448 - 8137123 AGGTA-GGCGAGCTCCTGTATA-TTTTAATG-CCATTTT--TTCAAGCTC-TAATTA-TGGAATGGGGCTTTTAAAATGAAAA-GGGCTTGGTGCTGGGGTGTAATTCTCT-GAGCAG-TCTGGGCCTAAGAACAACCTTGCAATTACAGGCTTTTCTGACTGGAGGGTGCAGACCCTGAGTCCCTTCCACTGATCTTGTAAGGGAGGGGTC-TGTGTCTC-----AGTGATGGA-GGGGTG-TGTTCATGGATAAATGAAGCCCCTCATTAG-GGGG-CTGGCCCAGCAGAGGCCACAG-GGCATGGGAT--CTGGCCAGCTCCACACAGCCTCCTGCAGAGACATGCAGATATTGGAGATC-CTCCC--TCTCTGGCGTCAGAGCTGGGACCAGTGGGGACGCTATGGCCAGGAATAAAGCCTCTC-AAAATTCT-TTTGGGCAACTCCCCA-CCCAGGCCTGATGTTCCACC-TG---- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60967997 412 - 77573801 CAGCA-GACTAGCTTCCATATA-CTCCTGTG-CTACTTT--TTCAAGCCT-TAATTA-TGGAACGGGGCTTTTTAAATGAAAT-AGGCTTGATGCTGGGGTATAATTCTCA-GAGCAG-TTTAGGCACGAAGACAGCCCTGCAATTAAAGCCTTCTCTGATTAGAGGAA----------TGCCGTCTCTGTGTCTCTTGTACGTGGAAGGTC-TGTGTCTCCTCTTGGTGATGGAAAGGGCA-TCTGTGTGTATAGATGAGGCCTCTTTGTAC-AAGAACCAGCTCCTTGGGGGCTGCAG-GGCCTGGTCTGCCAGCCCAGGTGACC----------CTATGTAGAGACAGGCTTGGAAGCCC-TTCAA--TCTCTGGGGAGCAGAATGGA-------GAGCTCCTGCAGCCAAGATCAGAGGACCTC-AAA----------------TTCCCA-CCCAGAGT------TCTCGT-TGTG-G i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=27603.000000 s hg38.chr7_KI270899v1_alt 54237 12 + 190869 TCCCT-CCCAGAG- s panTro5.chrUn_NW_015974890v1 6133 13 - 15765 TCCCTCCCCAGAG- i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 15155 12 - 432965 TCCCT-CCCAGAG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78185 12 + 85365473 TCCCT-CCCAGAG- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918097 10 + 185818997 -CCCT-CTGGGA-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33534067 10 + 192294377 -CCCT-CTGGGA-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4295287 10 - 9440265 -CCCT-CTGGGA-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16884806 10 - 21915920 -ccct-ctggga-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 25035 10 - 21531802 -CCCT-CTGGGA-- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 204509 10 + 6586416 -CCCT-CTGGGA-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146571133 11 - 204313951 TCCCT-CCCAGA-- i calJac3.chr2 C 0 I 1 s cebCap1.NW_016107703v1 408338 11 - 2125214 TCCCT-CCCAGA-- i cebCap1.NW_016107703v1 C 0 I 1 s otoGar3.GL873611 2115168 11 - 8137123 GTCCC-CTGAGA-- i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 60968409 12 - 77573801 TCCAT-CCAATA-G i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 44975 1612 - 2515279 I e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=1902046.000000 s hg38.chr7_KI270899v1_alt 54249 295 + 190869 GG--TTCTGCTTG--C--ACCCCCAGGGCCAGGCACAGCCCCCACACTCTCCTCCT-CCCCACACCAGTTCCTCTGCCACCCTCATGGGGCCTG--ACCACTCCCTGCAGCTT---GGGGAGTCCAAAGCACCCCCTTCCCTGAGGGACAGGAGGGGCCCCT---------GAGCCAGGGCCCTCTAACAGCCATCCCGGGGCCTGGGGTCTGTGGAGGGGTCACGTCCTTGCT-CCTTCCTTTCTGTG--TTCCCACTTCTACGAGGAGAGG--GGTGGA--GACTCTTTCCAGCT-CTC-CAGGTCTACCTCCACAC-AGCCTT s panTro5.chrUn_NW_015974890v1 6146 297 - 15765 GGA-TTCTGCTTG--C--ACCCCCAGCGGCCAGCACAG-CCCCACACTCGTCTCCTCCCCCACACCAGTTCC-CTGCCACCCTCATTGGGCCCGCAACCACTCTCTGCAGCTT---GGGGAGTCCAAAGCA-CCCCTTCCCTGAGGGACAGGA-GGGCGCCT---------GAGCCAGGG-CCTCTAACAGCCATCCGGAGGCCTCGGGTCTGTGGA-GGGTCACGTCC-TGCT--TTTCCTTTCTGCGTTTTCCCACTTCTACGAGGAAAGC--GGTGGACGGGCTCTTTCCAGCTCCTCGCAGGTCTACCTCCACAC-AGCCTT i panTro5.chrUn_NW_015974890v1 C 0 I 190 s gorGor5.CYUI01015914v1 15167 295 - 432965 GG--TTCTGCTTG--C--ACCCCCAGGGCCAGGCACAGCCCCCACACTCTCCTCCT-CCCCACACCAGTTCCTCTGCCACCCTCATGGGGCCTG--ACCACTCCCTGCAGCTT---GGGGAATCCAAAGCACCCCCTTCCCTGAGTGACAGAAGGGGCCCCT---------GAGCCAGGGCCCTCTAACAGCCATCCCGGGGCCTGGGGTCTGTGGAGGGGTCACGTCCTTGCT-CCTTCCTTTCTGTG--TTCCCACTTCTACGAGGAAAGG--GGTGGA--GACTCTTTCCAGCT-CTC-CAGGTCTACCTCCACAC-AGCCTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78197 291 + 85365473 GG--CTCTGCCTG--C--ACTCCCAGGGCCAGGGACAGCCCCCACACTCTCCT----CCCCACACCAGTTCCTCTGCCACCCTCATGGGGCCCA--ACCACTCCCTGCAGCTT---GGGGAGTCCAAGGCCCCCCCTTCCCTGAGTGACAGGAGGGGCCCCT---------GAGCCAGGGCCTTCGAACAGCCGTCCCGGGGCCTGGGGTCTGTGGACGGGTCGCGTCCTCCCT-CCTTCCTTTCTGCA--TTCCCATTTCTA-AAGGAAAGG--GGTGGA--GACCCTATCCGGCT-CTC-CAGGTCTACCTCCCGAC-AGCCTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918107 291 + 185818997 GG--CTCTGCTTG--C--ACCCCCAGGACCAGGCACAG-CCCCACACTCTCCT----CCCCACACCAGTTCCTCTGCCACCCTCACGGGGCCCG--ACCACTCCCTGCAGCTT---GGGGACTCCAAAGCACCCCCTTCCCTGAGTGACGGGAGGGGCCCCT---------GAGCCAGGGCCCTCCAACAGCTGTCCCGGGGCCTGAAGTCTGTGGAGGGGTCACGTCCTCACT-CCTTCCTTTCTGCA--TTCCCACTTCTCTGACGGAAGG--GGTGGA--GACCCTTTCCGGCT-CTC-CAAGTCTACCTCCCAAC-AGCCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33534077 291 + 192294377 GG--CTCTGCTTG--C--ACCCCCAGGACCAGGCACAG-CCCCACACTCTCCT----CCCCACACCAGTTCCTCTGCCACCCTCACGGGGCCCG--ACCACTCCCTGCAGCTT---GGGGACTCCAAAGCACCCCCTTCCCTGAGTGACGGGAGGGGCCCCT---------GAGCCAGGGCCCTCCAACAGCTGTCCCGGGGCCTGAAGTCTGTGGAGGGGTCACGTCCTCACT-CCTTCCTTTCTGCA--TTCCCACTTCTCTGACGGAAGG--GGTGGA--GACCCTTTCCGGCT-CTC-CAAGTCTACCTCCCGAC-AGCCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4295297 291 - 9440265 GG--CTCTGCTTG--C--ACCCCCAGGACCAGGCACAG-CCCCACACTCTCCT----CCCCACACCAGTTCCTCTGCCACCCTCACGGTGCCCG--ACCACTCCCTGCAGCTT---GGGGACTCCAAAGCACCCCCTTCCCTGAGTGACGGGAGGGGCCCCT---------GAGCCAGGGCCCTCCAACAGCTGTCCCGGGGCCTGAAGTCTGTGGAGGGGTCACGTCCTCACT-CCTTCCTTTCTGCA--TTCCCACTTCTCTGACGAAAGG--GGTGGA--GACCCTTTCCGGCT-CTC-CAAGTCTACCTCCCGAC-AGCCTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16884816 291 - 21915920 gg--ctctgcttg--c--acccccagggccaggCACAG-CCCCACACTCTCCT----CCCCACACCAGTTCCTCTGCCACCCTCACGGGGCCCG--ACCACTCCCTGCAGCTT---GGGGACTCCAAAGCGCCCCCTTCCCTGAGTGACGGGAGGGGCCCCT---------GAGCCAGGGCCCTCCAACAGCTGTCCCGGGGCCTGAAGTCTGTGGAGGGGTCACGTCCTCACT-CCTTCCTTTCTGCG--TTCCCACTTCTCTGACGGAAGG--GGTGGA--GACCCTTTCCGGCT-CTC-CAGGTCTACCTCCCGAC-AGCCTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 25045 291 - 21531802 GG--CTCTGCTTG--C--ACCCCCAGGACCAGGCACAG-CCCCACACTCTCCT----CCCCACACCAGTTCCTCTGCCACCCTCACGGGGCCCT--ACCACTCCCTGCAGCTT---GGGGACTCCAAAGCGCCCCCTTCCCTGAGTGACAGGAGGGGCCCCT---------GAGCCAGGGCCCTCCAACAGCCGTCCCGGGGCCTGAAGTCTGTGGAGCGGTCACGTCCTCACT-CCTTCCTTTCTGCG--TTCCCACTTCTCTGACGGAAGG--GGTGGA--GACCCTTTCCGGCT-CTC-CAGGTCTACCTCCCGAC-AGCCTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 46587 291 - 2515279 GG--CTCTGCTTG--C--ACCCCCAGGGCCAGGCACAG-CCCTACACTCTCCT----CCCCACACCAGTTCCTCTGCCACCCTCATGGGGCCCG--ACCACTCCCTGCAGCTT---GGGGACTCCAAAGCGCCCCCTTCCTTGAGTGACGGGAGGGGCCCCT---------GAGCCAGGGCCCTCCAACAGCTGTCCCGGGGCCTGAAGTCTGTGGAGGGGTCACGTCCTCACT-CCTTCCTTTCTGCA--TTCCCACTTCGCTGATGGAAGG--GGTGGA--GACCCTTTCCGGCT-CTC-CAGGTCTATCTCCCGAC-AGCCTT i manLeu1.NW_012101810v1 I 1612 C 0 s colAng1.NW_012117710v1 204519 291 + 6586416 GG--CTCTGCTTG--C--ACCCCCAGGGCCAGGCACAG-CCCCACACTCTCCT----CCCCACACCAGTTCCTCCGCCACCCTCATGGGGCCCG--ACCACTCCCTGCAGCTT---GGGGACTCCAAAGTGCCCCCTTCCCTGAGTGACAGAAGGGGCCCCT---------GAGCCAGGGCCCTCCAACAGCCGTCCCGGGGCCTGGGGTCTGTGGAGGGGTCACATCCTCACT-CCTTCCTTTCTGCG--TTCCCACTTTGCTGATGAAAGG--GGTGGA--GACCCTTTCCGGCT-CTC-CAGGTCCACCTCCCGAC-AGCCTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146571145 298 - 204313951 GG--CTCTGCTTG--C--AGCCCCAGAGCCAGGCACAGCCCCCACACTCTCCTCCT-CCCCACACCAGTTCCTCTGCTGCCCTCACATAGCCCA--ACCACTCCCTGCAGCTTGAAGGGGACTCCAATGTACCACCTTCCCTGAATGATAGGAGGGACCCCC---------GAGCCAGAACCCTCTAACAGCCACCCTGGGGCCTGGGGTCTTTGGAGGGGTCACATTCTTTCT-CCTTCCTTTCTTTG--CTCCCACTTCTCTGAGGAAAAG--GGTGGA--GATCGTTTCCAGCT-CTC-CAGGTCAAACTCCCGAC-AGCCTT i calJac3.chr2 I 1 C 0 s cebCap1.NW_016107703v1 408350 298 - 2125214 GG--CTCTGCTTG--C--ACCCTCAGAGCCAGGCACAGCCCCCACACTCTCGTCCT-CCCCACACCGGTTCCTCTGCTGCCCTCACATAGCCCA--ACCACTCCCTGCAGCTTGAAGGGGACTCCAATGTACCACCTTCCCTGAGTGATAGGAAGGACCCCT---------GAGCTAGCACCCTCTAACAGCCACCCCGGGGCCTGGGGTCTTTGGAGGGGTCACATTCCTGCT-CCTTCCTTTCTTTG--CTCCCACTTCTCCTAGGAAAGG--GGTGGA--GATCGTTTCCAGCT-CTC-CAGGTCAACCTCCCGAC-AGCCTT i cebCap1.NW_016107703v1 I 1 C 0 s otoGar3.GL873611 2115180 275 - 8137123 GG--CACTGCTTGTAC--ACCCTCAGGGCCAGGCATGG-TTCCATA-TCTCCC----TCCTGCCCAAGTCCCTCTGCTACCCTCACACAGCCCG--ACTACTCACCACAGCCT---AGGGACCCCA--GTGCCCTCTTCCCTGAGTG-CAGGAGGGGACCCCGTCAGGGGAGGACCTGGTCCTTCTAATGGCTGTCCTGGGTCT-------------GGGGTCACCTCCTCTCCCCCTTCCTTTCTGAG--CTCTCATTC---------AGAA--GGTAGG--GAC--TTTCCAGCT-CTC-CAGGTCTACCTCCCAAC-GGCCTT i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 60968421 252 - 77573801 --ACCTCTGTTGA--CAGAGCTCCAGGACCAGACCCAC-------------------CACCACACCA-----------CCCCTCTTGGGGCACA--GCCACTCCCCGCAGTTT---GGGGGCCTCAGCATGCCCTC-TCCCTGAGC-----------CCACT---------GTCCTCTGG---TTTGAACTCCTTCCTG----CTAAACTCTGGCTCCTGGGCATTCCTCTCCT-GCACCCCCTCTGAT--CTCCCATTTTTTGGAGGAAAAGGTGGGGAG--GACTCTTCTTTTGT-CTC-CAGGTCCGTCTGCCACTGAGCCTT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=866154.000000 s hg38.chr7_KI270899v1_alt 54544 155 + 190869 GGAGGGGC-GTCCTGGGGGTAGATTACGAACAGGATGGGGCGCTGCTGTCTTTGTGGAAGCCCAGGCCTCCTCCTCGAAGG--CCCTATGATCCCGTGTCTGACTTGTAGGTGTCCGTGTCCCCTTCCCCACCAGGCTGTTCACTCCTCCAGGGTACA s gorGor5.CYUI01015914v1 15462 155 - 432965 GGAGGAGC-GTCCTGGGGGTAGATTACGAATAGGATGGGGCGCTGCTGTCTTTGTGGAAGCCcaggcctcctcctcgaaga--ccctatgatcccgtgtctgacttgtaggtgtccttgtccccttccccaccaggctgtgcactcctcgggggtagg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78488 154 + 85365473 GGAGGGGC-ATCCTGGGGGGAGATTATGAACAGGATGGGACGCTGCTGTCTTTGTGGAAGCCCA-GCCTCCTCCTCAAAGa--ccctgtgatcccgtgtctgacttgtaggtgtccatgtccccctccccaccaggctgtgcactccttgagggtagg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918398 154 + 185818997 GGAGGGGC-ATCCTCGGGGGAGATTATGAATAGGATGGGGCGCTGCTGTCTTCGTGGAAGCCCAGGCCTCCTCCTCAAAGA--CCCTATGATCCCGTGTCTGACTTGTAGGTGCCCGTGTCCCC-TCCCCACCAGGCTGTGCCCTCCTTGAGGGTAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33534368 154 + 192294377 GGAGGGGC-ATCCTCGGGGGAGATTATGAATAGGATGGGGCGCTGCTGTCTTCGTGGAAGCCcaggcctcctcctcaaaga--ccctatgatcccgtgtctgacttgtaggtgcccgtgtcccc-tccccaccaggctgtgccctccttgagggtagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4295588 154 - 9440265 GGAGGGGC-ATCCTCGGGGGAGATTATGAATAGGATGGGGCGCTGCTGTCTTCGTGGAAGCCCAGGCCTCCTCCTCAAAGA--CCCtatgatcccgtgtctgacttgtaggtgcccgtgtcccc-tccccaccaggctgtgccctccttgagggtagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16885107 154 - 21915920 GGAGGGGC-ATCCTCGAGGGAGATTATGAATAGGATGGGGCGCTGCTGTCTTCGTGGAAGCCcaggcctcctcctcaaaga--ccctatgatcccgtgtctgacttgtaggtgcccgtgtcccc-tccccaccaggctgtgccctccttgagggtagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 25336 154 - 21531802 GGAGGGGC-ATCCTCGGGGGAGATTATGAATGGGATGGGGCGCTGCTGTCTTCGTGGAAGCCCAAGCCTCCTCCTCAAAGA--CCCTATGATCCCGTGTCTGACTTGTAGGTGCCCGtgtcccc-tccccaccaggctgtgccctccttgagggtagg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 46878 154 - 2515279 GGAGGGGC-ATCCTCGGGGGAGATTATGAATAGGATGGGGCGCTGCTGTCTTCGTGGAAGCCCAGGCCACCTCCTCAAAGA--CCCTATGATCCCGTGTCTGACTTGTAGGTGCCCGTGTCCCC-TCCCCACCAGGCTGTGCCCTCCTTGAGGGTAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 204810 154 + 6586416 GGAGGGGC-GTCCTCGGGGGAGATTATGAATAGGATGGGGCGCTGCTGTCTTCCTGGAAGCCcaggcctcctcctcaaaga--ccctatgatcccgtgtctgacttgtaggtgcccgtgtcccc-tccccaccaggctgtgccctccttgagggtagg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146571443 154 - 204313951 GGAGGGGC-ATCCT-GGGGGAGATTATGAATAGGATGGGGCGCTGCTGTCTTTGTGGAAGCCCAgccctcctcttcaaaga--ccctatgatcccctgtctgacttgtagttgtccatgtccccctccccacaaggctgggcactccctgagggtagg i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 408648 152 - 2125214 GGAGGGGCAATTCT-GGGGGAGATTATGAGTAGGATGGGGCGCTGCTGTCTTTGTGGAAGCCCAG---GTCTCTTCAAAGA--CCGTATGATCCCCTGTCCAACTCGTAGTTGTCcatgtcccccaccccaccaggctgggcactccctgagggtagg i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2115455 120 - 8137123 -GGAGAGT-ATCTC--TGGAACCTCAGGAGCAGGATGGGCCACTGCAGTCTTTGGACAGGCCCAGGCCTCCTCCTCAGAGATCTCCTGTCATCC------------------------GCCCCC-TCCCCGT-AGGATGTTTCCTCCTCC-------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60968673 105 - 77573801 -GGGGGTG-TCCCTGGAGGGGGCTCATGAGCAGAATGG-------------------AACCCCAGGCTTCCTACTAACAGG------------------------TGCAGGCCTC-----TCCC-TTCCCAGCAGGTCAGGTGCTCTCTGAGGACA-- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I e panTro5.chrUn_NW_015974890v1 6443 190 - 15765 I a score=954240.000000 s hg38.chr7_KI270899v1_alt 54699 137 + 190869 GGTC-CCCCCTCCAGCTCCTTTCTGG-GACCCAGAGCTCACTTCAGGGCTCAG--CACAAAGTAGATGG-CCTGA-GATAAGCAGA-CAA-GTAGATGGCACCGCTGCCAGGCCCACGGG-GATCACAGGGCTGCCCACGTGCTCC s panTro5.chrUn_NW_015974890v1 6633 138 - 15765 GGTC-CCCCCATCAGCTCCTTTCTGGCGACCCAGAGCTCACTTCAGGGCTCAG--CACAAAGTAGATG--CCTGACGATAAGCAGAACAATGTAGATGGCACCGC-GCCAGGCCCACGGGCGATGACAGGGGCGCCA--GTGCTCC i panTro5.chrUn_NW_015974890v1 I 190 C 0 s gorGor5.CYUI01015914v1 15617 136 - 432965 ggtc-ccccctccagctcctttctgg-gacccagagctcacttcagggctcag--cacaaagtagatgG-CCTGA-GATAAGCAGA-CAA-GTAGATGGCACTGCTGCCAGGCCCACGGG-GATCACAGGGTTGCCCA-CTGCTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78642 137 + 85365473 agtc-ccccatccagctcctttctgg-gacccagagctcacttcagggctcag--cacgaagtagatgG-CCTGA-GATAAGCAGA-CAA-GTAGATGGCACTGCTGCCAGGCCCACGGG-GATCACAGGGCTGCCCACGTGCTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918552 136 + 185818997 -GGT-CCCCCTCCAGTTCCTTTCTGG-GACCCGGAGCTCACTTCAGGACTCAG--CACGAAGTAGATGG-CCTGA-GATAAGCAGA-CAA-GTAGATGTAACTGCTGCCAGGCCCACGGG-GATCACAGGGCCGCCCACGTGCTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33534522 136 + 192294377 -ggt-ccccctccagttcctttctgg-gacccggagctcacttcaggactcag--cacgaagtagatgG-CCTGA-GATAAGCAGA-CAA-GTAGATGTAACTGCTGCCAGGCCCACGGG-GATCACAGGGCCGCCCACGTGCTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4295742 136 - 9440265 -ggt-ccccctccagttcctttctgg-gacccggagctcacttcaggactcag--cacgaagtagatgG-CCTGA-GATAAGCAGA-CAA-GTAGATGTAACTGCTGCCAGGCCCACGGG-GATCACAGGGCCGCCCACGTGCTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16885261 134 - 21915920 -ggt-ccccctccagttcctttctgg-gacccggagctcacttcaggactcag--cacgaagtagatgG-CCTGA-GATAAGCAGA-CAA-GTAGATGGAACTGCTGCCAGGCCCACAGG-GATCAC--GGCCGCCCACGTGCTCC i cerAty1.NW_012002954v1 C 0 I 35 s chlSab2.chr28 25490 136 - 21531802 -cgc-ccccctccagctcctttctgg-gacccggagctcacttcaggactcag--cacaaagtagatgG-CCTGA-GATAAGCAGA-CAA-GTAGATGGCACTGCTGCCAGGCCCACGGG-GATCACAGGGCCGCCCACGTGCTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 47032 136 - 2515279 -GGT-CCCCCTCCAGCTCCTTTCTGG-GACCCGGAGCTCACTTCAGGACTCAG--CACGAAGTAGATGG-CCTGA-GATAAGCAGA-CAA-GTAGATGGAACTGCTGCCAGGCCCACGGG-GATCACAGGGCTGCCCACGTGCTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 204964 137 + 6586416 -ggt-ccccctccagctcctttctgg-gacccagagctcacttcagggctcagcacacgaagtagatgG-CCTGA-GATAAGCAGA-CAA-GTAGACAGCACTGCTGCCAGGCCCACGGG-CATCACAGGGC-GCCCACGTGCTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146571597 137 - 204313951 -ggtcccccctccagcccctctctag-aacccagagctcacttcaggactcag--cacaaagtagatgc-ccTGA-GACAAGCAGA-CAA-GTAGATGGCACTGCTGCCAGGCCCATGGT-GATCACAGGGCCGCCCACTTGCTCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 408800 136 - 2125214 -ggt-ccccctccagcccctctctgg-agcccagagctcacttcaggactcag--cacaaagtagatgc-ccTGA-GACAAGCAGA-CAA-GTAGGTGGCACTGCTGCCAGGCCCATGGG-GATCACAGGGCCGCCCACTTGCTCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2115575 124 - 8137123 ---------------CTCCCCTCTGG-GCCCCACAGCCCACTTCAGTGCTCAG--CACAAAGCAAATGCTCCTGA-AATGAGCAGG-CGA-ATAGGAGACGCTCCTGCCACACCTGTGAG-GAACATGGAGTCACCCCCTTGTGAC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60968778 136 - 77573801 -GGG-CTCCTCCCAACTCCTCCCTGA-GTTCCAGAGCCCACTTGAGGGCTCAG--CACAGAGTAGATGCTCTTGA-AAGAAGCAGA-TAA-AGAGGCGGTGCTCCTGTGAGACCCATGAA-GGACAGGAAGCCACCC-CTTGTTAC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=42052.000000 s hg38.chr7_KI270899v1_alt 54836 8 + 190869 AC--GAAACA s panTro5.chrUn_NW_015974890v1 6771 10 - 15765 ACAAGAAACA i panTro5.chrUn_NW_015974890v1 C 0 C 0 s gorGor5.CYUI01015914v1 15753 8 - 432965 AC--GAAACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78779 8 + 85365473 AC--AAAACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918688 8 + 185818997 GC--GAAGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33534658 8 + 192294377 GC--GAAGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4295878 8 - 9440265 GC--GAAGCA i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 25626 8 - 21531802 AC--GAAGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 47168 8 - 2515279 GC--GAAGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 205101 8 + 6586416 GT--GAAGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146571734 8 - 204313951 AC--GAAGCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 408936 8 - 2125214 AC--GAAGCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2115699 8 - 8137123 AT--GAACCA i otoGar3.GL873611 C 0 I 2 s canFam3.chr6 60968914 8 - 77573801 AC--AGAACA i canFam3.chr6 C 0 C 0 e cerAty1.NW_012002954v1 16885395 35 - 21915920 I e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=256696.000000 s hg38.chr7_KI270899v1_alt 54844 41 + 190869 --CACAGGCACTGACGTGATGGCAG-AGCACCACCAG-GGTCTTT s panTro5.chrUn_NW_015974890v1 6781 43 - 15765 --CACAGGCACTGACGTGATGGCAGCAGGCCCACCAGCGGTCTTG i panTro5.chrUn_NW_015974890v1 C 0 N 0 s gorGor5.CYUI01015914v1 15761 41 - 432965 --CACAGGCACTGAAGTGATGGCAG-GGCACCACCAG-GGTCTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78787 41 + 85365473 --CACAGGCACTGACGTGATGGCAC-GGCACCACCAG-GCTCTTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918696 41 + 185818997 --CACAGGCACTGATGTGATGGCAC-AGCACCACCAG-GGTCTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33534666 41 + 192294377 --CACAGGCACTGATGTGATGGCAC-AGCACCACCAG-GGTCTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4295886 41 - 9440265 --CACAGGCACTGATGTGATGGCAC-AGCACCACCAG-GGTCTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16885430 41 - 21915920 --CACAGGCACTGATGTGATGGCAC-GGCACCACCAG-GGTCTTT i cerAty1.NW_012002954v1 I 35 C 0 s chlSab2.chr28 25634 41 - 21531802 --CACAGGCACTGATGTGATGGCAC-GGCACCACCAA-GGTCTTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 47176 41 - 2515279 --CACAGGCACTGATGTGATGGCAC-CGCACCACCAG-GGTCTTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 205109 41 + 6586416 --CACAGGCACTGATGTGATGGCAC-GGCACCACCAG-GGTCTTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146571742 41 - 204313951 --CACATGCACTGATGCGATGGCAC-AGCACCACCAG-GGCCTTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 408944 41 - 2125214 --CACGTGCACTGACGTGATGGCAC-AGCGCCACCCG-GGCCCTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2115709 36 - 8137123 --AACTGGCA-----GTGATAATAT-CGTACCACTGG-GGCCTTT i otoGar3.GL873611 I 2 C 0 s canFam3.chr6 60968922 42 - 77573801 GTCATA-ACCCAACAGGGCTAATAT-CCTGCTCCTGG-GGCCATT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=61870.000000 s hg38.chr7_KI270899v1_alt 54885 7 + 190869 CAGGAGG s panTro5.chr7_NW_015973523v1_random 5962 7 - 29993 CAGGAGG i panTro5.chr7_NW_015973523v1_random N 0 C 0 s gorGor5.CYUI01015914v1 15802 7 - 432965 CAGGAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78828 7 + 85365473 CAGGAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918737 7 + 185818997 CAGGAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33534707 7 + 192294377 CAGGAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4295927 7 - 9440265 CAGGAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16885471 7 - 21915920 CAGGAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 25675 7 - 21531802 CAGGAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 47217 7 - 2515279 CAGGAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 205150 7 + 6586416 CAGGAGG i colAng1.NW_012117710v1 C 0 I 21 s calJac3.chr2 146571783 7 - 204313951 TAGGAGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 408985 7 - 2125214 TAGGAGA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2115745 7 - 8137123 CGGGAGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60968964 7 - 77573801 TGGGAGG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=113295.000000 s hg38.chr7_KI270899v1_alt 54892 16 + 190869 -GGACTCAGAGTGCTGA s panTro5.chr7_NW_015973523v1_random 5969 16 - 29993 -GGACTCAGAGTGCTGA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 15809 16 - 432965 -GGACTCAGAGTGCTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78835 16 + 85365473 -GGACTCAGAGTGCTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918744 16 + 185818997 -GGACTCAGAGTGCTGA i rheMac8.chr3 C 0 I 4 s macFas5.chr3 33534714 14 + 192294377 -GGACTCAGAGTGCT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4295934 16 - 9440265 -GGACTCAGAGTGCTGA i macNem1.NW_012019910v1 C 0 I 4 s cerAty1.NW_012002954v1 16885478 16 - 21915920 -AGACTCAGAGTGCTGA i cerAty1.NW_012002954v1 C 0 I 4 s chlSab2.chr28 25682 16 - 21531802 -GGACTCAGAGTGCTGA i chlSab2.chr28 C 0 I 4 s manLeu1.NW_012101810v1 47224 16 - 2515279 -GGACTCAGAGTGCTGA i manLeu1.NW_012101810v1 C 0 I 4 s calJac3.chr2 146571790 16 - 204313951 -GGACTCAGACTGCTGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 408992 16 - 2125214 -GGACTCAGAGTGCTGA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2115752 16 - 8137123 -GAGCTCAGAATGCTGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60968971 17 - 77573801 GAAGCTCAGAATGCTCA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 205157 21 + 6586416 I e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=110719.000000 s hg38.chr7_KI270899v1_alt 54908 98 + 190869 ---------------ACGACCCCAC--------GCACGCAGTCGTGAGGAAAGAGCT----GGGCCTGCTCAGCTCGTCCTACATGTGCAGAGAACACAGTGATCAGAGCTCCT--GGCAGTGCCCA s panTro5.chr7_NW_015973523v1_random 5985 98 - 29993 ---------------ACTACCCCAT--------GCATGCAGTCGTGAGGAAAGAGCT----GGGCCTGCTCAGCTTGTCCTACATGTGCAGAGAACACAGTGATCAGAGCTCCT--GGCAGTGCCCA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 15825 98 - 432965 ---------------ACTACCCCAT--------GCACGCAGTCGTGAGGAAAGAGCT----GGGCCTGCTCAGCTTGTCCTACATGTGCAGAGAACACAGTGATCAGAGCTCCT--GGCAGTGCCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78851 98 + 85365473 ---------------ACTGCCCCAT--------GCACGCAGTCGTGAGGAAAGAGCT----GGGCCTGCTCAGCTTCTCCTAGACGTGCAGAGAACACAGTGACCAGAGCTCCT--GGCAGTGCCTA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33534728 6 + 192294377 ----------------------------------------------------GAGCT----G----------------------------------------------------------------- i macFas5.chr3 C 0 C 0 s calJac3.chr2 146571806 98 - 204313951 ---------------ACTGCCCCAC--------GCACACAGTCGTGAGGAAGGAGTT----GAGCCTGCTCACCTTGTCCTAGATGTGCAGAGTGCACAGTGATCAGAGTGCCT--GGCCTTGCCCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 409008 106 - 2125214 ---------------ACTGCCCCCCACACACAGACACACAGTCGTGAGGAAGGAGCT----GAGCCTGCTCACCTTGTCCTAGATGTGCAGAGCGCACAGTGATGAGAGCACCT--GGCCGTGCCCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2115768 102 - 8137123 ---------------GTTGTCCCAA--------ACATGCATTAGTGAAGAAAGAACTTCTGGGGCCTACTTCTCTTGTCCTAGATAAGCAGAGTACACAATGTTTGGAACTGCG--TGCCAGGCCCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60968988 112 - 77573801 ATTTAGAAACAGCCTGCTCTCTCGG--------ATATGCATTAGTGAAGAAAGGACTTCA-GAACAT-----TCTTGTCCTAGATACGTGGAACACACCAAG-TTGGAGCTGCCAGGGCCATGCCCA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 205157 21 + 6586416 I e chlSab2.chr28 25698 4 - 21531802 I e manLeu1.NW_012101810v1 47240 4 - 2515279 I e cerAty1.NW_012002954v1 16885494 4 - 21915920 I e macNem1.NW_012019910v1 4295950 4 - 9440265 I e rheMac8.chr3 33918760 4 + 185818997 I e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=833532.000000 s hg38.chr7_KI270899v1_alt 55006 113 + 190869 CCTGTGGTCAGCCTGGGAGAAGGAG---G-CCTTGTC-CTCG---ATGACAGTGGTTCATGTGCACT-GCTGTTTCTGGA--GTCAGCAGAAACAAATCCATTCTTTAAGTAACGAACAGAGGC s panTro5.chr7_NW_015973523v1_random 6083 114 - 29993 CCTGTGGTCAGCCTGGAAGAAGGGG---GGCCTTGTC-CTCG---ATGACAGTGGTTCATGTGCACT-GCTGTTTCTGGA--GTTAGCAGAAACAAATCCATTCTTTAAGTAACGAACAGAGGC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 15923 114 - 432965 CCTGTGGTCAGCCTGGGAGAAGGGG---GGCCTTGTC-CTCG---ATGACAGTGGTTCATGTGCACT-GCTGTTTCTGGA--GTCAGCAGAAACAAATCCATTCTTTAAGTAACGAACAGAAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 78949 115 + 85365473 CCTGCGGTCAGCCTGGGAGAAGGGG---GGCCTTGTC-CTCG---ATGACAGTGGTTCGTGCGCACTGGCTGTTTCTGGA--GTCCAGAGAAAAAAATCCATTCTTTAGGTAACAAACAGAGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918764 112 + 185818997 CCTGTGGTCAGCCTGGGAGAAGGGG------CCTGTC-CTTG---ATGACAGTGGTTCATGTGCACTGGCTGTTTCTGGA--GTTAGCAGAAATAAATCCATTCTTTATGTAACAAACAGAGGC i rheMac8.chr3 I 4 I 14 s macFas5.chr3 33534734 112 + 192294377 CCTGTGGTCAGCCTGGGAGAAGGGG------CCTGTC-CTTG---ATGACAGTGGTTCATGTGCACTGGCTGTTTCTGGA--GTTAGCAGAAATAAATCCATTCTTTATGTAACAAACAGAGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4295954 112 - 9440265 CCTGTGGTCAGCCTGGGAGAAGGGG------CCTGTC-CTTG---ATGACAGTGGTTCATGTGCACTGGCTGTTTCTGGA--GTTAGCAGAAATAAATCCATTCTTTATGTAACAAACAGAGGC i macNem1.NW_012019910v1 I 4 I 14 s cerAty1.NW_012002954v1 16885498 112 - 21915920 CCTGTGGTCAGCCTGGGAGAAGGGG------CCTGTC-CTCG---ATGACAGTGGTTCATGTGCACTGGCTGTTTCTGGA--GTTAGCAGAAATAAATCCATTCTTTATGTAACAAACAGAGGC i cerAty1.NW_012002954v1 I 4 I 14 s chlSab2.chr28 25702 112 - 21531802 CCTGTGGTCAGCCTGGGAGAAGGGG------CCTGTC-CTCG---ATGACAGTGGTTCGTGTGCACTGGCTGTTTCTGGA--GTTAGCAGAAATAAATCCATTCTTTATGTAACAAACAGAGGC i chlSab2.chr28 I 4 I 14 s manLeu1.NW_012101810v1 47244 112 - 2515279 CCTGTGGTCAGCCTGGGAGAAGGGG------CCTGTC-CTCG---ATGACAGTGGTTCATGTGCACTGGCTGTTTCTGGA--GTTAGCGGAAATAAATCCATTCTTTATGTAACAAACAGAGGC i manLeu1.NW_012101810v1 I 4 I 14 s colAng1.NW_012117710v1 205178 112 + 6586416 CCTGCGGCCAGCCTGGGAGAAGGGG------CCTGTC-CTCG---ATGACAGTGGATCGTGTGCACTGGCTGTTTCTGGA--GTTAGCAGAAACAAATCCATTCTTTATGTAACAAACAGAGGC i colAng1.NW_012117710v1 I 21 I 14 s calJac3.chr2 146571904 114 - 204313951 CCTGTGACCAGCCTGGGTAAAGGGG----GCCCTGTC-CTTG---TTGACAATGGTTCCTGCACACTGGCTGTTTCTGCA--GTCAGCAGAAGCAAATCCATTCTTTGTGTAGTGAAAAGAGGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 409114 114 - 2125214 CCTGCGGCCAGCCTGGGAGAAGGGG----GCCCTGTC-TTTG---TTGACAGTGGTTCCTGTGCACTGGCTGTTTCTGCA--GTCAACAGAAGCAAATCCATTCTTTGTGTAACGAAAAGAGGC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2115870 121 - 8137123 CCTGCAGTCAGCCTGGGAGAAGGAGAAGGGCCCTGTCTCTCA---TGGACAGTGATTCATACACACTGGCTATTTCTGGAATGTTGGCAGAAACAAATTTGTTCTTTATGTAGTGTGGAGAGAC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60969100 119 - 77573801 CCTGCAGTCAGTCTGAGAAAAGAGA-AGGGCCCTGTC-CTTGGCAATGACAGTGATGTATGCA-ACTGGCTATTTCTGGAAGGTCAGTAAAAACAAATTCATTCTTTATGTAATGG--AGAGGC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=-490.000000 s hg38.chr7_KI270899v1_alt 55119 3 + 190869 GCC- s panTro5.chr7_NW_015973523v1_random 6197 3 - 29993 GCC- i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 16037 3 - 432965 GCC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 79064 3 + 85365473 GTC- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33534846 3 + 192294377 TCC- i macFas5.chr3 C 0 I 11 s calJac3.chr2 146572018 3 - 204313951 ACC- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 409228 3 - 2125214 ACC- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2115991 3 - 8137123 ATT- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60969219 3 - 77573801 -CTC i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 205290 14 + 6586416 I e chlSab2.chr28 25814 14 - 21531802 I e manLeu1.NW_012101810v1 47356 14 - 2515279 I e cerAty1.NW_012002954v1 16885610 14 - 21915920 I e macNem1.NW_012019910v1 4296066 14 - 9440265 I e rheMac8.chr3 33918876 14 + 185818997 I e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=562843.000000 s hg38.chr7_KI270899v1_alt 55122 450 + 190869 TCTGCTACTTGACACAGAGCAATGCTAGGTGTCGGGTAGTCAGGGG-CC-AGGGCCT-GGGTCTGGGGACTGCGG-TGCCCGGTCTAAGACAGAGGCCAGGCTGGCCATATCAGCGAGCAGCAGAAGGCCCCCC-AGAAAGCTG----TCTCTGGTCCAGCGGCGAGGAGCCCCCA-CAGGTAGGAGCCACCAA---GCGCAGTGACCGCGTG--CTCTGCTCTCCAGCCCGTGACAGATCCGAG---GGGCACTTTGCAAACTCT--CCGAGGCCAGGAGACCATGCATCCTCTTTACCTCCTGCCCTGGCCATGACTTCCATCATGCCCGATCTGACCCTCACCACTA------TCAGGCACCCTGAAAGGGAGCGTA----------------TTCGTGGATGGTAAATGCTAGCCCCATGGGCAGGGGCTTCCTGG-----CCTGTGCCATGTGACCC--------------TCCCTGACACAGCTGCCTGGA--------------------------CCTCAGCCAGGACT s panTro5.chr7_NW_015973523v1_random 6200 450 - 29993 TCTGCTACTTGACACAGAGCAATGCTAGGTGTTGGGTAGTCAGGGG-CC-AGGACCT-GGGTCTGGGGACTGCGG-TGCCCAGTCTAAGACAGAGGCCAGGCTGGCCATATCAGTGAGCAGCAGAAGGCCCCCG-AGAAAGCTG----TCTCTGGTCCAGTGGCGAGGAGCCCCCA-CAGGTAGGAGCCACCAA---GCGCAGTGACCGCGTG--CTCTGCTCTCCAGCCCGTGTCAGATCCGAG---GGGCACTTTGCAAACTCT--CCGAGGCCAGGAGGCCATGCATCCTCTTTACCTCCTGCCCTGGCCATGACTTCCATCATCCCCGATCTGACCCTCACCACTA------TCAGGCACCCTGAAAGGGAGCGCG----------------TTCGTGGATGGTAAATGCCAGCCCCATGGGCAGGGGCTTCGTGG-----CCTGTGCCATGTGACCC--------------TCCCTGACACAGCTGCCTGGA--------------------------CCTCAGCCAGGATT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 16040 450 - 432965 TCTGCTACTTGACACAGAGCAATGCTAGGTGTTGGGTAGTCAGGGG-CC-AGGACCT-GGGTCTGGGGACTGCGG-TGCCCGGTCTAAGACAGAGGCCAGGCTGGCCATATCAGTGAGCAGCAGAAGGCCCCCC-AGAAAGCTG----TCTCTGGTCCAGCGGCGAGGAGCCCCCA-CAGGTAGGAGCCACCAA---GCGCAGTGACCGCGTG--CTCTGCTCTCCAGCCCGTGTCAGATCCGAG---GGGCACTTTGCAAACTCT--CCGAGGCCAGGAGGCCATGCATCCTCTTTACCTCCTGCCCTGGCCATGACTTCCATCATCCCCGATCTGACCCTCACCACTA------TCAGGCACCCTGAAAGGGAGCGCG----------------TTCGTGGATGGTAAATGCTAGCCCCATGGGCAGGGGCTTCCTGG-----CCTGTGCCATGTGGCCC--------------TCCCTGACACAGCTGCCTGGA--------------------------CCTCAGCCAGGACT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 79067 473 + 85365473 TCTGCTGCTTGACACAGAGCAATGCTAGGTGTGGGGTGGTCAGTGG-CC-AGGACCT-GGGTCTGGGGACAGCAG-TGCCCAGTCTAAGACAGAGGCCAGGCTGGCCACATCAGTGAGCAGCAGAAGGCCCCCC-GGAAAGCTG----TCTCTGGTCCAGCAGCGAGGAGCCTTCA-CAGGTAGGAGCCACCAA---GCACAGTGACCACGTG--CTCTGCTCTCCAGCCTGTGTCATATCCGAG---GGGCAGTTTGCCAACTCT--CCGAGGCCAGGAGGCCATGCATCCGCTTCACCTCCTGCTCTGGCCATGATTTCTGTCATCCCCGATCTGACTCTCACCACTA------TCGGGCA-CCTGAAAGGGACGGCG-----------------TCAGGGATGGTAAATGCTAGCCCCATGGGCAGGGGCTTCCTGG-----CCTGTGCCATGTGACCC--------------T-CCTGCCACAGCTGCCTGGATCTGACCCAGCTCTGCCCATCAGAGCCCTGGGCCAGGAGT i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146572021 433 - 204313951 TCTGC-----------------TGCTGGGTGTTGGGTGGTGAGTGG-CC-AGGACCT-GGGTCCGGGGACAGCAGGTACCCAGTCTAAGGCAGAGGCCAGGCTGGCCATATCAGTGAGCAGCAGATGGCCCCCC-AGAAAGCCA----TTTATGGTCCAGCGGTGAGGAGCCCTCA-CAGGTGAAAGCCACTAA-GTGCACAGTGACTGCGTG--CTCTGCTCTCCAGCC--TATCAGATCCGA----GGGCATTTTGCAAGCTCT--CCAGGGCCGGGAGGTCACGCATCCTCTGTACCACCTGCTCTGGCCATGACCTCCATCATCCCTGATCTGACCCTCACCACTA------TCAGGCACCCTGAAAGGGAGAGCA----------------TTGGTGGATGGTGAATGCCAGCCCTGTGGGGAGGTGCTTCCCAG-----CCTGTGCCATGTGACCC--------------TCCCTGCCACAGCTGCCTGGA--------------------------CCTGACCCAGCAGT i calJac3.chr2 C 0 I 26 s cebCap1.NW_016107703v1 409231 429 - 2125214 TCTGC-----------------TGCTAGGTGTTAGGTGGTGAGTGG-CC-AGGACCT-GGGTCTGGGGACAGCAGTTGCCCAGTTTAAGGCAGAGGCCAGGCTGGCCATATCAGTGAGCAGCAGATGGTCCCCC-AGAAAGCCA----TTTCTGGTCCAGCGGTGAGGCGCCCCCA-CAGGTGGGAGCCACTAA-GTGCACAGTGACTGCATG--CTGTGCTCTCCAGCCTGTGTCAGATCCGA----GGGCACTTTGCAAGCTTT--CCAAGGTCAGGAGGTCATGCATTCTCTGTACCACCTGCTCTGGCCATGACCTCTGTCATCCCTAATCTG------ACCACTA------TCAGGCACCCTGAAAGGGAGAGCA----------------TTGGTGGATGGTGAATGCCAGCTCTGTGGGGAAGGACCTCCCAG-----CCTGTGCCATGTGACCC--------------TCCCTGCCACAGCTGCCTGGA--------------------------CTTGACCCAGCAGT i cebCap1.NW_016107703v1 C 0 I 22 s otoGar3.GL873611 2115994 384 - 8137123 TTCACTGCTTG--ACAGAGTAACTCTAGGTATTGGCGAATGAATGG-CCAAGGACATAGGGTCAGGGCACAGCAGGTGCCCAGACTA------AGGCCACGGTGACCATGTGAGTAAGTACTAGGGAGGCCC--------------------TGGCTCAGTGGCGAGGACCCCCC----------------------CTGCAGGG--------------GCTCTCCACTCTGTGTCAG--------------ACTCTGCAAACTCT--TAGGCCTCAGG-GACCCTGCATCATCT--AACTCCTACTTTGGCTGTGCCTTCCATGA--CTGGGTCAGATGGTCACTGTTG------TCAGGGACCCTGAAGGCGAGGG-------------------TGGTAGATGGT--ATGTCTGACCCAGGGCCAGAGCCTTCCTGG-----TCTGTCCCACATGACCC---------AGCTGTGCCCATCAGAGCTTCAGGGC--------------------------CAGCAGCATGGACT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60969222 486 - 77573801 CCTGCCGCTTTGCACAAAGCGACACTAGGTGGTCTGAGGTCAGGGGACC-AGGAGGT-AGGC--------------TTCTCAGGCTAAGACAGATGCCAGGCTGACCATAAGGGTGAGCATCTGATGCTCCCTGAAGAAAGCTATGTCTGTCTGGTCCAGGGGTGAAAAGCCCCCAGCAGGAGGGGGACCCCCACATGTCCAGTGACTGTGTGGCCCTAGATCATGACCCTGAAGTGTGTCTATGCCCCTGTTCCCTGAAAACTCTTGCTGGTTTTGGTGACCCCCACCCTCTCTCTGCTTCCTGACCCAGATGTAATTTCTACCA--CGGGTTCACACGTTCACCAAAGAGGAATGCAGGTATCCTGAGATGTAAGGCAGCCCTCTAAGCAGGGGTTGGTGACTGGTGAGTGCCAACCTGGGGGGCAGTGGCTTCCTGAAACCCTTTGTGCCATGTGACCCCTCCCTGCGGGCTATGCCCATCAGAGCC---------------------------------CCTGAGCCACAAGT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 205290 14 + 6586416 I e chlSab2.chr28 25814 14 - 21531802 I e manLeu1.NW_012101810v1 47356 14 - 2515279 I e cerAty1.NW_012002954v1 16885610 14 - 21915920 I e macNem1.NW_012019910v1 4296066 14 - 9440265 I e macFas5.chr3 33534849 11 + 192294377 I e rheMac8.chr3 33918876 14 + 185818997 I e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=6262.000000 s hg38.chr7_KI270899v1_alt 55572 8 + 190869 TTGGACTC s panTro5.chr7_NW_015973523v1_random 6650 8 - 29993 TTGGACTC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 16490 8 - 432965 TTGGACTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 79540 8 + 85365473 TTGGACTG i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146572480 8 - 204313951 TTGAACTG i calJac3.chr2 I 26 C 0 s otoGar3.GL873611 2116378 8 - 8137123 GGGGGCTA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60969708 8 - 77573801 CTTGACCA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 205290 14 + 6586416 I e chlSab2.chr28 25814 14 - 21531802 I e manLeu1.NW_012101810v1 47356 14 - 2515279 I e cerAty1.NW_012002954v1 16885610 14 - 21915920 I e macNem1.NW_012019910v1 4296066 14 - 9440265 I e macFas5.chr3 33534849 11 + 192294377 I e rheMac8.chr3 33918876 14 + 185818997 I e aotNan1.NW_018514293v1 33200 5 + 376347 I e cebCap1.NW_016107703v1 409660 22 - 2125214 I a score=467611.000000 s hg38.chr7_KI270899v1_alt 55580 354 + 190869 ---GGGGAGCAGGTCATCAGTCACACCCTTGGCAGGACCTGTC---CTGGGAGCCCTCTGTGTGTG-GGGAGCTGCCTCATTCCCCTGTGAACACAGTAGGGCATCATGGGGTACGACGGTGAGCACTGGAGCTACCCTGGGGGCTGGGCTCAGTCCT--GAG-GTCAGGCCCAACCTAAGCTGGGCAGCCTGGTGTCAGCTGCAAGAACCCTCTTCACCTTCCTCATTCC-TACATGACTTTCCAGTGTAGGCCATCGGGTGGGATGGGGT-AAAAAAACA--CAGGCCCCATTCTACCCCTCTGCTGATCCACACATGGACATGTG---------TACACCCAGGCCTCCCTGCTCACAACCATGGCCAGGAAGG s panTro5.chr7_NW_015973523v1_random 6658 354 - 29993 ---GGGGAGCAGGTCATCAGTCACACCCTTGGCAGGACCTGTC---CTGGGAGCCCTCTGTGTGTG-GGGAGCTGCCTCATTCCCCTGTGAACACAGTAGGGCATCATGGGGTACGACGGCGAGCACTGGGGCTACCCTGGGGGCTGGGCTCAGTCCT--GAG-GTCAGGCCCAACCTAAGCTGGGCAGCCTGGTGTCAGCTGCAAGAACCCTCTTCACCTTCCTCAATCC-TACGTGACTTTCCGACGTAGGCCATCGGGTGGGATGGGGT-AAAAAAACA--CAGGCCCCATTCTACCCCTCTGCTGATCCGCACATGGACATGTG---------TACACCCAGGCCTCCCTGCTCACAACCATGGCCAGGAAGG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 16498 352 - 432965 ---GGGGAGCAGGTCATCAGTCACACCCTTGGCAGGACCTGTC---CTGGGAGCCCTCTGTGTGTG-GGGAGCTGCCTCATTCCCCTGTGAACACAGTAGGGCATCATGGGGTACGACGGTGAGCACTGGGGCTACACT-GGGGCTGGGCTCAGTCCT--GAG-GTCAGGCCCAACCTAAGCTGGGCAGCCTGGTGTCAGCTGCAAGAACCCTCTTCACCTTCCTCATTCC-TACATGACTTTCTGGTGTAGGCCAT-GGGTGGGATGGGGT-AAAAAAACA--CAGGCCCCATTCTACCCCTCTGCTGATCCACACATGGACATGTG---------TACACCCAGGCCTCCCTGCTCACAACCATGGCCAGGAAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 79548 300 + 85365473 ---GGGGAGCAGGTCATCAGTCACACCCTTGGCAGGACCTGAC---CTGGGAGCCATCTGTGTGTG-GGGAGCTGCCTCATGCCCCTGTGAACACAGAAGGGCATCATGGG--------------------GCTACCCTGGGGGCTGGGCTCAATCCT--GAG-GTCAGGCCCAAACTAAGCTGGGCAGCCCAGTGTCAGCTGCAAGAACCCTCTTCATCTTCCTCATTCC-TACATGACTTTCTGGTGTAGGCCATGGGGTCGGATGGGGT-AAAAAAACA--CAGGCCCCATTCTATCCCTCTGCTGATCCACACATGGACATATG---------TACACC---------------------------------- i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146572488 352 - 204313951 ---GGGGAGCAGGTCATCAGTCACACCCTTCACAGGGCCTGTC---CTGGGAGCTCTCTGTGCATG-GAGAGCTGCCTCGTGCCCCTGTGAACACAAAAGGGGATCATGTGGTATGACGGTGAGTGCTGT-GCTGCCCTAGGGGCTGGGCTCACTCCT--GAG-GCCAGGCGCAACCTAAGCTGGGCAGCCCGGTGTCAGCTTCAAGGACCCTCTTCATCTTCCTCATTCC--ACATGACTTTCTGGTGTAGGCCATGGGGCACGATGGGGTAAAAAAAACA--CAGACCTTGTTCTATCCCTCTGCTGATCCACTCATGGACATGCA---------TACACA-AGGCCTCCTTGCTCGCAGCCATGGCCAGGAAGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 409682 350 - 2125214 ---GGGGAGCAGGTCATCAGTCACACCCTCCACAGGACCTGTC---CTGGGAGCTCTCTGTGTATG-GAGAGCTGCCTCGTGCCCC-GTGAACACAAAAGGGGATCATGTGGTATGCCGGTGAGTGCTGG-GCTGCCCTGGGGGCTGGGCTCAGTCCT--GAG-GCGGGGCGCAACCTAAGCTGGGCAGCCTGATGTCAGCTGCAAGGACCCTCTTCATCTTCCTCATTCC--ACATGGCTTTCTGGTGTAGGCCATGGGGTGGGATGGGGT-AAAAAAACA--CAGACCTCGTTCTATCCCTCTGCTGATCCACTCATGGACATGTG---------TACACC-AGGCCTCCTTGCTCGCGGCCACAGCCAGGAAGG i cebCap1.NW_016107703v1 I 22 C 0 s otoGar3.GL873611 2116386 309 - 8137123 -----------------------TGGTTTTGGCAGGATCCCTCCCTCCAGGCACTCTCTGTGTGT----GAACGGCTTTGCGTCCATGTGA--ACAGAAGTGGATCATGCCGTGCGATGGTGGGATCTGAGGCTGCGT--GGGGCCGG--TCAGTCCT--CAGAGCCAGGCCCTGCTGGAGCC-GGCAGCCCAGTGTCAGCTGTCAGCATGCCCTTCACTCTCTTGTCTCC-TCTGTGAGTT---GGTAGGGGCCAT-GGGTTGGGTGGGGT-ATGAGAACACCCAGACCT-------------TGCTGACCTGCACGTGGACGCCT----------CACACC-AGGCATCC-TGCTCACAGCCATGG-CAGAAGGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60969716 350 - 77573801 GAGGTGGGGCAGACGATCAGTCATACCTTTGGCAGGACTTGTC---CTGGGTGCTCTCTGGGGGTTCAGGAACCATCT-ATGGCCATGCATACACAGAAGCAGGTCAGATCGT------------------GCAAACCCTGGGGCTAAGGTCAGTCCTCGGAG-GAGAGGCCTGAACTGAGCTGAGCAGTCCAGGGTCAGCTATACAGATATTCCTCATTCTTCTCATTTATTAGACCACTATTTGATGGGGGTGATGAGATGAGATGGGGT-ATGAAGACG--TTCCCCTATTTTCTTGCTGATGCACATCTGCACATGCACACATGCGTGATCCATACACCCCGGCACTCCTGTACATGG-TGTGCCCAGAAGGG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 205290 14 + 6586416 I e chlSab2.chr28 25814 14 - 21531802 I e manLeu1.NW_012101810v1 47356 14 - 2515279 I e cerAty1.NW_012002954v1 16885610 14 - 21915920 I e macNem1.NW_012019910v1 4296066 14 - 9440265 I e macFas5.chr3 33534849 11 + 192294377 I e rheMac8.chr3 33918876 14 + 185818997 I e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=608100.000000 s hg38.chr7_KI270899v1_alt 55934 95 + 190869 CAGGCTCCGGCCAGGGCTCTGAAATGCCAGGA----GGGTATAGAGAAG------ACAGGTGGCCCTCTGCCCCTGCAGTCAGGCAGCACCTGCCCACTCCGAAT s panTro5.chr7_NW_015973523v1_random 7012 95 - 29993 CAGGCTCCAGCCAGGGCTCTGAGATGCCAGGA----GGGTGTAGAGAAG------ACAGGTGGCCCTCTGCCCCTGCAGTCAGGCAGCACCTGCCCACCCCGAAT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 16850 95 - 432965 CAGGCTCCGGCCAGGGCTCTGAAATGCCAGGA----GGGTGTAGAGAAG------ACAGGTGGCCCTCTGCCCCTGCATTCAGGCAGCACCTGCCCACTCCGAAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 79848 85 + 85365473 ----------CCAGGGCTCTGAGATGCCAGGA----GGGTGTAGAGAAG------ACAGGTGGCCCTTTGCCCCTGCAGTCAGGCAGCACCTGTCCACTACGAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918890 94 + 185818997 CAGGCTCGGGCCAGGGCTCTGA-ATGCCAGGA----GGGTGTAGAGAAG------GCAGGTGGCCCTTTGACCCCGCAGTCAGGCAGCACCTGCCCACCCTGGCT i rheMac8.chr3 I 14 C 0 s macFas5.chr3 33534860 94 + 192294377 CAGGCTCGGGCCAGGGCTCTGA-ATGCCAGGA----GGGTGTAGAGAAG------GCAGGTGGCCCTTTGACCCCGCAGTCAGGCAGCACCTGCCCACCCTGGCT i macFas5.chr3 I 11 C 0 s macNem1.NW_012019910v1 4296080 94 - 9440265 CAGGCTCGGGCCAGGGCTCTGA-ATGCCAGGA----GGGTGTAGAGAAG------GCAGGTGGCCCTTTGACCCCGCAGTCAGGCAGCACCTGCCCACCCTGGCT i macNem1.NW_012019910v1 I 14 C 0 s cerAty1.NW_012002954v1 16885624 95 - 21915920 CAGGCTCGGGCCAGGGCTCTGAGATGCCAGGA----GGGTGTAGAGAAG------GCAGGTGGCCCTTTGACCCCGCAGTCAAGCAGCACCTGCCCACCCTGGCT i cerAty1.NW_012002954v1 I 14 C 0 s chlSab2.chr28 25828 95 - 21531802 CAGGCTCGGGCCAGGGCTCTGAGATGCCAGGA----GGGTGTAGAGAAG------ACAGGTGGCCCTTTGACCCCGCAGTCAGGCAGCACCTGCCCACCCTGGCT i chlSab2.chr28 I 14 C 0 s manLeu1.NW_012101810v1 47370 95 - 2515279 CAGGCTCGGGCCAGGGCTCTGAGATGCCAGGA----GGGTGTAGAGAAG------GCAGGTGGCCCTTTGACCCCGCAGTCAAGCAGCACCTGCCCACCCTGGCT i manLeu1.NW_012101810v1 I 14 C 0 s colAng1.NW_012117710v1 205304 95 + 6586416 CAGGCTCGGGTCAGGGCTCTGAGATGCCAGGA----GGGTGTAGAGAAG------ACAGGTGGCCCTTTGCCCCCGCAGTCAGGCAGCACCTGCCCACCCTGGCT i colAng1.NW_012117710v1 I 14 C 0 s calJac3.chr2 146572840 95 - 204313951 CAGGCTCAGGCCAGGGCTCTGAGATGCCAGGA----GGGTGTAAAGAAG------ACCAGAGGCCCTTTGCCCCTGCAGTCAGGCAGCACCCATCCACCCTGACT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 410032 95 - 2125214 CAGGCTCAGGCCAGGGCTCTCAGATGCCAGGA----GGATATAGAGAAG------ACCAGAGGCCCTTTGCCCCTGCAGTCAGGCGGCGCTCGCCCACCTTGACT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2116695 78 - 8137123 CAGACTCAGGCCAGGGCGTGGGCATGTCGGGA----GGGC-TGGAGAAG------AC----------CTCGCCCTGGGGGC------CGTCCACCCCTCCCAGCT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60970066 93 - 77573801 CAGATGAGGGCCAAGG-------GTGTCAGGAAGCCAGATGTGGAGAAGGGCAACATCAGAGGGCATCTGAGAC-----TCTGACCACGCTTCTCAGCTCCAGGC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33200 5 + 376347 I a score=1470419.000000 s hg38.chr7_KI270899v1_alt 56029 209 + 190869 GCTGCAGCCA----GCTGGTTACAGTGTCTGTTACTCAGCTAGTGCGTTTGCCAGTGCTCTTCAGTGTCACCATCGTGGC-A-GCCTCTGTCATTGAGAACAGTTTAACAC-----------AGGAGAAAGAA--------------GTTGCAG-GGCCCTG--------------------CCCCGGTAGAGGTCTGTCTTCCCTGCCAGCTTTACCCAGCGC--------GGCCGTGGGAACTGCAGGAACCAGGCTCCCAGGAGGA s panTro5.chr7_NW_015973523v1_random 7107 209 - 29993 GCTGCAGCCA----GCTGGTTACAGTGTCTGTTACTCAGCTAGTGCGTTTGCCAGTGCTCTTCAGTGTCACCATCGTGGC-A-GCCTCTGTCATTGAGAACGGTTTAACAC-----------AGGAGAAAGAA--------------GTTGCAG-GGCCCTG--------------------CCCCGGTAGAGGTCTGTCTTCCCTGCCAGCTTTACCCAGCGC--------GGCCGTGGGAACTGCAGGAACCAGGCTCCCAGGAGGA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 16945 207 - 432965 GCTGCAGCCA----GCTGGTTACAGTGTCTGTTAGTCAGCTAGTGCGTTTGCCAGTGCTCTTCAGTGTCACCATCGTGGC-A-GCCTCTGTCATTGAGAACAGTTTAACAC-----------AGGAGAAAGAA--------------GTTGCAG-GGCCCT---------------------CCCCGGTAGAGGTCTGTCTTCCCTGCCAGCTTTACCCAGCGC--------GGCC-TGGGAACTGCAGGAACCAGGCTCCCAGGAGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 79933 208 + 85365473 GCTGCAGCCA----GCTGGTTCCAGTGTCTGTTACTCAGCTAGTGCGTTTGCCAGTGCTTTTCAGTGTCACCATCGTGGC-A-GCCTCTGCCATTGAGAACAGTTTAACAC-----------AGGAGAAAGAC--------------GTTGCAG-GGCCCTA--------------------TCCCCGTAGAGGTCTGCCTTCCCTGCCAGCTTTACCCAGCGC--------GGCCGTGGGAACTGCA-GAACCAGGCTCCCAGAAGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33918984 210 + 185818997 GCTGCCACCA----GCTGGTTCCAGCGTCTGCTGCTCAGCTAGTGTGTTAGCCAGTGCTCTTCAGTGTCAGCTTCGTGGC-A-GCCTCTGTCATTGAGAACAGTTTAACAG-----------AGGAGAAGGAA--------------GTTGCAGAGGCCCTG--------------------CCCCAGTACAGGTCTGCCTTCCCCGCCAGCGTTACCCAGCGT--------GGCCGTGGGAACTGCAGGAACCAGGTTCCCGGGAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33534954 210 + 192294377 GCTGCCACCA----GCTGGTTCCAGCGTCTGCTGCTCAGCTAGTGTGTTAGCCAGTGCTCTTCAGTGTCAGCTTCGTGGC-A-GCCTCTGTCATTGAGAACAGTTTAACAG-----------AGGAGAAGGAA--------------GTTGCAGAGGCCCTG--------------------CCCCAGTACAGGTCTGCCTTCCCCACCAGCGTTACCCAGCGT--------GGCCGTGGGAACTGCAGGAACCAGGTTCCCGGGAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4296174 210 - 9440265 GCTGCCACCA----GCTGGTTCCAGCGTCTGCTGCTCAGCTAGTGTGTTAGCCAGTGCTCTTCAGTGTCAGCTTCGTGGC-A-GCCTCTGTCATTGAGAACAGTTTAACAG-----------AGGAGAAGGAA--------------GTTGCAGAGGCCCTG--------------------CCCCAGTACAGGTCTGCCTTCCCCACCAGCGTTACCCAGCGT--------GGCTGTGGGAACTGCAGGAACCAGGTTCCCGGGAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16885719 230 - 21915920 GCTGCCACCA----GCTGGTTCCAGCGTCTGCTGTTCAGCTAGTGTGTTAGCCAGTGCTCTTCAGTGTCAGCTTCGTGGC-A-GCCTCTGTCATTGAGAACAGTTTAACAC-----------AGGAGAAGGAA--------------GTTGCAGAGGCCCTGCCCCGGTACAGGTCTGCCTTCCCCGGTACAGGTCTGCCTTCCCCGCCAGCGTTACCCAGCGC--------GGCCGTGGGAACTGCAGGAACCAGGTTCCCGGGAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 25923 210 - 21531802 GCTGCCACCA----GCTGGTTCCAGCATCTGCTGCTCAGCTAGTGTGTTTGCCAGTGCTCTTCAGTGTCAGCTTCGTGGC-A-GCCTCTGTCATTGAGAACACTTTAACAC-----------AGGAGAAGGAA--------------GTTGCAGAGGCCCTG--------------------CCCTGGTACAGGTCTGCCTTCCCCACCAGCGTTACCCAGCGC--------GGCCATGGGAACTGCAGGAACCAGGCTCCCGGGAGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 47465 210 - 2515279 GCTGCCACCA----GCTGGTTCCAGCGTCTGCTGCTCAGCTAGTGTGTTAGCCAGTGCTCTTCAGTGTCAGCTTCGTGGC-A-GCCTCTGTCATTGAGAACAGTTTAACAC-----------AGGAGAAGGAA--------------GTTGCAGAGGCCCTG--------------------CCCCGGTACAGGTCTGCCTTCCCCGCCAGCGTTACCCAGAGC--------AGCCGTGGGAACTGCAGGAACCAGGTTCCCAGGAGGA i manLeu1.NW_012101810v1 C 0 I 131 s colAng1.NW_012117710v1 205399 210 + 6586416 GCTGCCACCA----GCTGGTTCCAGTGTCTGCTGCCCAGCTAGTGTGTTTTCCAGTGCTCTTCAGTGTCAACTTCGTGGC-A-GCCTCTGTCATTGAGAACAGTTTAACAC-----------AGGAGAACCAA--------------GTTGCAGAGGCCCTG--------------------CCCCGGTAGAGGCCTGCCTTCCCCGCCAGCGTTACCCAGCAC--------GGCCGTGGGAACTGCAGGAACCAGGCTCCCGGGAGGA i colAng1.NW_012117710v1 C 0 I 294 s calJac3.chr2 146572935 201 - 204313951 GCTGCAGTCA----GTTGGTTCCAGTGTCTGAAACTCAGCTAGTGTGTTTATCAGTGCTCTTCAGTGTCACCATCATGGC-A-GCCTCTGTCACTGAGAAGAGTTTAACAC-----------AGGAGAAAGTA--------------GTTGCAGTGGCCCTG---------------------CCGGGTAGATGCCTGCCTTTCCTGCCAGCTTCACCAGGAAC----------------CAACTGCAGGAACCAGGTTCCCAGGAGGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 410127 209 - 2125214 GCTGCAATCA----ACTGGTTCCAGTGTCTGTTACTCACCTAGTGTGTTTATCAGTGCTCTTCAGTGTCACCATCGTGGC-A-GCCTCTGTCACTGAGAACAGTTTAACAC-----------AGGAGAAAGTA--------------GTTGCAGTGGCCCTG---------------------CCCGGTAGATGCCTGCCTTTCCTGCCAGCTTCACCCAGAGA--------GGCTGTGGGAACTGCAGGAACCATGTTCCCAGGAGGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 33205 209 + 376347 GCTGCAGTCA----GCTGGTTCCAGTGTCTGCTACTCAGCTAGTGGGTTCATCAGTGCCCTTCAGTGTCACCATCGTGGC-A-GCCTCTGTCGCTGTGAACAGTTTAGCAC-----------AGGAGAAAGAA--------------GTTGCAGAGGCCCTG---------------------CCTGGTGGATGCCTGCCTTTCCTGCCAGCTTCACCCAGAGC--------GGCTGTGGGAACCGCAGGAAGCAGCTTCCCAGGAGGA i aotNan1.NW_018514293v1 I 5 C 0 s otoGar3.GL873611 2116773 196 - 8137123 GCTGTGGTCCCCTTGCTGGGCCAAGCATCCACCACTCAGCTTGTGTATTG-----------TCAGTGTCATAATCTTGGAGA-GTCCATGTCCCAGAAAACAATCTACAAC-----------AGAAGAAAGGGAAACAGGTAAAGGTGTAGCAGAGGCCCC---------------------CGCAGGTGGTGGCCTGAGGACTGT-CCAGATCCACCAGATGG--------GGCTTAGG-------------TAGGCTCTC------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60970159 200 - 77573801 ------CCCT----GATGCTCAAAATGTCCA-TATCCAACCAGTGTGTTTGTC--CACACTCAAATGTTATAATCTTGTC-AGGTCCCTGCCACTGAGAACAATCTGAAACAGGGCTAAGGGAGGGGAGAAAA--------------GGGACAG----TCTG--------------------CC------GAGGCCTGG----CCTGGCTGCTTCTTCCAGAGCATCTGCAAAGCCGTGGGCCAGCCAGCACCAACGCTTCC------- i canFam3.chr6 C 0 C 0 a score=137961.000000 s hg38.chr7_KI270899v1_alt 56238 37 + 190869 TGCAGACTGACTGACCGCTG----------------CTCCCCGGGGAAGAGCC s panTro5.chr7_NW_015973523v1_random 7316 37 - 29993 TGCAGAACAACTGACCGCTG----------------CTCCCCGGGGAAGAGGC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17152 37 - 432965 TGCAGAACGACTGACCGCTG----------------CTCCCCGGGGAAGAGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80141 33 + 85365473 TGCAGAGCGACCGACCACTG----------------CTCCCCGGGGAAA---- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919194 52 + 185818997 CGCAGA-TGACCAACCTCTGCTGGGGCTTAAATGGGCTCCCCAGGGAAGGGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535164 52 + 192294377 CGCAGA-TGACCGACCTCTGCTGGGGCTTAAATGGGCTCCCCGGGGAAGGGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4296384 52 - 9440265 CGCAGA-TGACCGACCTCTGCTGGGGCTTAAATGGGCTCCCCGGGGAAGGGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16885949 52 - 21915920 CGCAGA-TGACCAACTTCTGCTGGGGCTTAAATGGACTCCCCGGGGAAGGGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26133 52 - 21531802 CGCAGA-TGACCGACCTCTGCTGGGGCTTAAATGGGCTCCCCGGGGAAGGGCA i chlSab2.chr28 C 0 C 0 s calJac3.chr2 146573136 52 - 204313951 TGCAGACTGAATCAGCACTGTTGAGGCTTAAATGT-CTCACCAGGGAAGAGCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 410336 52 - 2125214 TGCAGACTGACCCAGCACTGTTGGGGCTTAAATGT-CTCACCAGGGAAGAGCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 33414 52 + 376347 TGCAGACCGACCCAGCGCTGCTGGGGCTTGAACGT-CTTGCCAGTGAAGAGCA i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 60970359 43 - 77573801 ----TA-TCAACCACCTCTG-----ATTTGAATGGGCTTTCTGGGCAAGAGAG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 205609 294 + 6586416 I e otoGar3.GL873611 2116969 0 - 8137123 C e manLeu1.NW_012101810v1 47675 131 - 2515279 I a score=2504837.000000 s hg38.chr7_KI270899v1_alt 56275 322 + 190869 GCTTT-----------------------------------------CTAGC-ACTTCCTTCCTCTTCCTGCAGCCCTCTCTTACCTTCCTGGGGTAGGGAAGGGATGCTGATGTGCTGAGATGGGGTTTTCTGCCTGTTAGAATTGCTGGGGAAAACAACTTACT--GTTTTAGCAAGGAAACAACATGCTTCATGGCAGCAAATTGTGTTTTCAGGGGCTCCAGAAAGATATCAGTCTGTTATAAAATAATCAGGCCAATGCTCAGGACCCATCACTAAGGAATAAACCAGCAGCTCTCCACGAGGGGGCACAGCTAG--CTTTCCTCTTCACCTCCAGAGGCT--GAGGCATCTTGCTGGC---TTGAGGC------- s panTro5.chr7_NW_015973523v1_random 7353 322 - 29993 GCTTT-----------------------------------------CTAGC-ATTTCCTTCCTCCTCCTgcagccctctcttaccttcctggggcagggaagggatgctgatgtgctgagatggggttttctgcctgttagaatTGCTGGGGAAAACAACTTACT--GTTTTAGCAAGGAAACAACACGCTTCATGGCAGCAAATTGTGTTTTCAGGGGCTCCAGAAAAATAGCAGTCTGTTATAAAATAATCAGGCCAATGCTCAGGACCCATCACTAAGGAATAAACCAGCAGCTCTCCACGAGGGGGCACAGCTAG--CTTTCCTCTTCACCTCCAGAGGCT--GAGGCATCTTGCTGGC---TTGAGGC------- i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17189 321 - 432965 GCTTT-----------------------------------------CTAGC-ACTTCCTTCCTCCTCCTGCAGCCCTCTCTTACCTTCCTGGGGCAGGGAAGGG-TGCTGATGTGCTGAGATGGGGTTTTCTGCCTGTTAGAATTGCTGGGGAAAACAACTTACT--GTTTTAGCAAGGAAACAACATGCTTCATGGCAGCAAATTGTGTTTTCAGGGGCTCCAGAAAGATATCAGTCTGTTATAAAATAATCAGGCCAATGCTCAGGACCCATCACTAAGGAATAAACCAGCAGCTCTCCATGAGGGGGCACAGCTAG--CTTTCCTCTTCACCTCCAGAGGCT--GAGGCATCTTGCTGGC---TTGAGGC------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80174 317 + 85365473 ------------------------------------------------AGC-ATTTCCTTCCTTCTCCTGCAGCCCTCTCTCACCTTCCTGGGGCAGGGAAGGGATGCTGATGTGCTGAGATGGGGTTTTCTGCCTGTTAGAATTACTGGGGAAAACAGCTTCCT--GTTTTTGCAAGGAAACAACATGGTTCATGGCAGCAAGTTGTGTTTTCAGGGGCTCCAGAAAGACGTCAGCCTGTTATAAAAGAATCAGGCCAATGCTCAGGACCCGTCACTAAGGAATAAGCCAGCAGCTCTCCACGAGGGGGCACAGCTGGCTCTTCCCTTCTCACCTCCAGAGGCT--GAGGCATCTTGCTGGC---TTGAGGC------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919246 317 + 185818997 GCTTT-----------------------------------------CTAGC-ActtccttccttctcctgcagccttctcttaccttcctGGGGCAGGGAACGGGTGCTGATGTGCTGAGATGGGGTTTTCTGCCTGTTAGAGTTGCTGGGGAAAACAACTTAAT--GTTTTAGCAAGGAAACAACATGCTTCATGGCACTAAACTGTG-TTTCAGGGGCTCCAGAAAGGTATCAGTT-GTTACAAGATCATCAGGCCAATGCTCAGGACCCACCACTAAGGAATAAGCCAGCAGCTCTCCACAAGGGGGCACAGCTAG--CTTTCCTTTTCACCTCCAGAGGCT--GAGGCA---TGCTGGC---TTGAGGC------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535216 320 + 192294377 GCTTT-----------------------------------------CTAGC-ActtccttccttctcctgcagccttctcttaccttcctGGGGCAGGGAACGGGTGCTGATGTGCTGAGATGGGGTTTTCTGCCTGTTAGAGTTGCTGGGGAAAACAACTTAAT--GTTTTAGCAAGGAAACAACATGCTTCATGGCACTAAACTGTG-TTTCAGGGGCTCCAGAAAGGTATCAGTT-GTTACAAAATCATCAGGCCAATGCTCAGGACCCACCACTAAGGAATAAGCCAGCAGCTCTCCACAAGGGGGCACAGCTAG--CTTTCCTTTTCACCTCCAGAGGCT--GAGGCATCTTGCTGGC---TTGAGGC------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4296436 356 - 9440265 GCTTTCTAGCActtccttccttctcctgcagccccagcttt-----ctagc-acttccttccttctcctgcagccttctcttaccttcctGGGGCAGGGAATGGGTGCTGATGTGCTGAGATGGGGTTTTCTGCCTGTTAGAGTTGCTGGGGAAAACAACTTAAT--GTTTTAGCAAGGAAACAACATGCTTCATGGTACTAAACTGTG-TTTCAGGGGCTCCAGAAAGGTATCAGTT-GTTACAAAATCATCAGGCCAATGCTCAGGACCCACCACTAAGGAATAAGCCAGCAGCTCTCCACAAGGGGGCACAGCTAG--CTTTCCTTTTCACCTCCAGAGGCT--GAGGCATCTTGCTGGC---TTGAGGC------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886001 357 - 21915920 GCTTTCTAGCActtccttccttctcctgcagcccca-----gctttctagc-acttccttccttctcctgcagccttctcttaccttcctGGGACAGGGAACGGGTGCTGATGTGCTGAGATGGGGTTTTCTGCCTGTTAGAGTTGCTGGGGAAAACAACTTAAT--GTTTTAGCAAGGAAACAACATGCTTCATGGCACTAAACTGTGTTTTCAGGGGCTCCAGAAAGGTATCAGTC-GTTACAAAATCATCAAGCCAATGCTCAGGACCCACCACTAAGGAATAAGCCAGCAGCTCTCCACAAGGGGGCACAGCTAG--CTTTCCTTTTCACCTCCAGAGGCT--GAGGCATCTTGCTGGC---TTGGGGC------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26185 321 - 21531802 GCTTT-----------------------------------------CTAGC-ACTTCCTTCCTTCTCCTGCAGCCCTCTCTTACCTTCCTGGGGAAGGGAACGGGTGCTGATGTGCTGAGATGGGGTTTTCTGCCTGTTAGAGTTGCTAGGGAAAACAACTGACT--GTTTTAGCAAGGAAACAACATGTTTCATGGCACTAAACTGTGTTTTCAGGGGCTCCAGAAAGGTATCAGTC-GTTACAAAATCATCAGGCCAATGCTCAGGACCCACCACTAAGGAATAAGCCAGCAGCTCTCCACAAGGGGGCACAGCTAG--CTTTCCTTTTCACCTTCAGAGGCT--GAGGTATCTTGCTGGC---TTGAGGC------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 47806 321 - 2515279 GCTTT-----------------------------------------CTAGC-ACTTCCTTCCTTCTCCTGCAGCCCTCTCTTACCTTCCTGGGGCAGGGAACGGGTGCTGATGTGCTGAGATGGGGTTTTCTGCCTGTTAGAGTTGCTGGGGAAAACAACTTAAT--GTTTTAGCAAGGAAACAACATGCTTCATGGCACTAAACTGTGTTTTCAGGGGTTCCAGAAAGGTATCAGTC-ATTACAAAATCATCAGGCCAATGCTCAGGACCCACCACTAAGGAATAAGCCAGCAGCTCTCCACAAGGGGGCACAGCTAG--CTTTCCTTTTCACCTCCAGAGGCT--GAGGCATCTTGCTGGC---TTGAGGC------- i manLeu1.NW_012101810v1 I 131 C 0 s colAng1.NW_012117710v1 205903 319 + 6586416 GCTTT-----------------------------------------CCAGC-ACTTCCTTCCTTCTCCTGCAGCCTTCTCGTACCTTCCTGGGGCAGGGAAGGGGTGCTGATGTGCTGAGATGGGGTTTTCTGCCTGCTAGAGTTGCTGGGGAAAACAACTTACT--GTTTTAGCAAGGAATCAACATGCTTCATGGCACTAAACTGTGTTTTCAGGGGCTCCAGAAAGGTATCAGTC-GTTCCAAAATCATCAGGCCAACGCTCAGGACCCGTCACTAAGGAACAAGCCAGCAGCTCTCCACGA-GGGGCACAGCTAG--CTTCCCTTTTCACCT-CAGAGGCT--GAGGCATCTTGCTGGC---TTGAGGC------- i colAng1.NW_012117710v1 I 294 C 0 s calJac3.chr2 146573188 318 - 204313951 GCTTT-----------------------------------------CTAGA-ATTTCC-TCCTTCCCCTGCTGCCCTCCCTTACCTTCCTGGGGCAGGGGAGGGGTGCCAATGTGCTGAGATGGGGCTTTCTGCCTTTCAGAGTTGCTGGGGAAAACAACTTACTAGGTTTTAGCAAGGAAACATC---CTTCATGGCAATAAACTGTATTTTCAGGGGCTACGGAAAGCTATCAGTGTGTTACAAAATAATCAGGGCAATGCTCAGGACCCATCACTAAGGAATACAACAGTACCTCTCCACCAGGGGGCGCAGCTAG--CTTTCCTTTTTACCTCCAGAGACC----GGCATCTTGCTGGC---TTGAGGC------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 410388 320 - 2125214 GCTTT-----------------------------------------CTAGC-ATTTCC-TCCTTCCCCTgctgccctcccttaccttcctggggcaggggaggggtgctgatatgctgagatggggttttctgcatttcagagttgctagggaaaacAACTTACTAGGTTTTAGCAAGGAAACATC---CTTCACGGCTGTAAACTGTGTTTTCAGGGGCTCCCGAAAGGTATCAGTGTGTTACAAAACAATCAGGGCAATGGTCAGGACCCATCACTAAGGAATAAACCAGAAGCTCTCCACCAGGGGGCGCAGCTAG--CTTTCCTTTTCACCTCCAGAGGCT--GAGGCATCTTGCTGGC---TTGAGGC------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 33466 320 + 376347 GCTTT-----------------------------------------CTAGG-ACTTCCTTCCTCCCCCGgctgccctccctcaccttcctggggcagaggaggggcgctgatgtgctgagatggggctttctgcctgtcagagtTGCTGGGGAAAACAACTTACTAGGTTTTAGCAAGGAAACATC---CGTCATGGCAGTAAACTGTGTTTTCAGGGGCTCCCAAAAGGTATCCGTGTGTTACAAAACCATTAGGGCAAGGCTCGGGACCCATCACTAAGGAATATACC-GCGGCTCTCCAGCAGGGGGCGCCGCTCG--CCTTCCTTTTCGCCCCCCGAGGCT--GCGGCGTCTTGCTGGC---TGGAGGC------- i aotNan1.NW_018514293v1 C 0 I 83 s otoGar3.GL873611 2116969 310 - 8137123 ----------------------------------------------CTGGC-ACTTTCTCCCTTCCTCTGCTGTCCT---GCACCTGCCAGGGCGAG---CTGGGCGCTGATGAGCTGAGATGGGGCTTTTTCTCTGTCACAGTTTCTGAGAAGAACTACTTACCAGGTTTGGGCAAGTAAACGATATGCTTTATGACAATAAATTGTGTTTTTA-GGATTCCAGAAAGGTATCAGTC--TTGT---GTATTTAGGGCAATGCTCAGGTCCCACCACAAAGAAATAAACCCCCAACTGGCCACAAGATGGCAGGGTTGG--TTCTTCTTTTCACTTGGAGAGGCA--GCAACATCTCCCTGGCTGGTTAAAGC------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60970402 313 - 77573801 GCTTC-----------------------------------------TAAACAACTTCCTT--TTTAAATGCTATCCCTCCCCACTACCCTGG--------AGGTCAGCTGGAGTGCTCAGGTGGGGGTTTCTTTCT-TCAAAGCTTCTGGGGAGAACTGCTTATGAGGTTTGGGTAAAAAAACAACACGGCTTGTGGCAATAAATTGTGTTTTCAGAGCCTTCACAAAGGTACCGTCCTGTT-CAAAGTAATCAGAGCAATTGTCATGATCCATCCCAAATACATAAACCTAGAACTCTCCACAAGGGGGCA------G--GTTTCTCCCTTACCTCCAGGAGGCAGGATGCATCTGGCAGGC---T---GGCTTGTTCT i canFam3.chr6 C 0 C 0 a score=477717.000000 s hg38.chr7_KI270899v1_alt 56597 73 + 190869 AGCCAGGCACCAGGTGGGAGCTGCAGTGCAGGGGCAGGCCT-GG------GGGCCTGATTATCGCAGGAGGA-GAAATGCA s panTro5.chr7_NW_015973523v1_random 7675 73 - 29993 AGCCAGGCACCAGGTGGGAGCTGCAGTGCAGGGGCAGGCCT-GG------GGGCCTGATTATCACAGGAGGA-GAAATGCA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17510 73 - 432965 AGCCAGGCACCAGGTGGGAGCTGCAGTGCAGGGGCAGGCCT-GG------GGGCCTGATTATCGCAGGAGGA-GAAATGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80491 73 + 85365473 AGCCAGGCCCCAGGCGGGAGCTGCAGTGCAGGGGCAGGCCC-GG------GGGCCTGATTATCATGGGAGGA-GAAATGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919563 72 + 185818997 AGCCAGGCACCAGCTGGGGGCTGCAGTGCAGGGGCAGGCCT--G------GGGTCTGATTATCGTGGGAGGA-GAAGTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535536 72 + 192294377 AGCCAGGCACCAGCTGGGGGCTGCAGTGCAGGGGCAGGCCT--G------GGGTCTGATTATCGTGGGAGGA-GAAGTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4296792 72 - 9440265 AGCCAGGCACCAGCTGGGGGCTGCAGTGCAGGGGCAGGCCT--G------GGGTCTGATTATCGTGGGAGGA-GAAGTGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886358 72 - 21915920 AGCCAGGCACCAGCTGGGGGCTGCAGTGCAGGGGCAGGCCT--G------GGGTCTGATTATCGTGGGAGGA-GAAGTACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26506 72 - 21531802 AGCCGGGCACCAGCTGGGGGCTGCAGTGCAGGGGCAGGCCT--G------GGGTCTGATTATCGTGGGAGGA-GAAGTGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48127 72 - 2515279 AGCCAGGCACCAGCTGGGGGCTGCAGTGCAGGGGCAGGCCT--G------GGGTCTGATTATCGTGGGAGGA-GAAGTGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206222 71 + 6586416 AGCCGGGCACCAGGTGGGGGCTGCAGTGCA-GGGCAGGCCT--G------GGGTCTGATTATCGTGGGAGGA-GAAGTGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146573506 73 - 204313951 AGCCCGGCATCGGGCGGAGGCTGCAGTGCAAGGGTAGGCCT-GA------GGACCTGATTATTGTGGGAGGA-GAAATGTA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 410708 79 - 2125214 AGCCCGGCACCCGGCGGACGCTGCAGTGCAAGGGCAGGCCT-GAGGACCTGGACCTGATTATCGTGGGAGGA-GAAATGCA i cebCap1.NW_016107703v1 C 0 I 25 s otoGar3.GL873611 2117279 71 - 8137123 AGCCAGATACAGGGAGGAGGCTGCTGTGTAGGGGCAGGTCCCAG------AGAGCTGATT---GGGATAGGA-GAGATGAA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60970715 68 - 77573801 -AGCAGGTACAGTGTGGG----GTTGTGATGGGGCAGGTCC-TG------GGGTCTGATGAGGACCAGAGGAGGAAGTGA- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33786 83 + 376347 I a score=56059.000000 s hg38.chr7_KI270899v1_alt 56670 13 + 190869 TAGTATGTTCATC s panTro5.chr7_NW_015973523v1_random 7748 13 - 29993 TAGTATGTTCATC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17583 13 - 432965 TAGTATGTTCATC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80564 13 + 85365473 TCGTATATTTGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919635 13 + 185818997 TAGTATATTGGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535608 13 + 192294377 TAGTATATTGGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4296864 13 - 9440265 TAGTATATTGGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886430 13 - 21915920 TAGTATATTGGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26578 13 - 21531802 TAGTATATTGGTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48199 13 - 2515279 TAGTATATTGGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206293 13 + 6586416 TAGTGTATTGGTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146573579 13 - 204313951 TAGTGTGTCAGTG i calJac3.chr2 C 0 C 0 s otoGar3.GL873611 2117350 13 - 8137123 GAGTGTATTTGTC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60970783 2 - 77573801 ---TA-------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 33786 83 + 376347 I e cebCap1.NW_016107703v1 410787 25 - 2125214 I a score=71627.000000 s hg38.chr7_KI270899v1_alt 56683 14 + 190869 CCCCCAGAGTGACG s panTro5.chr7_NW_015973523v1_random 7761 14 - 29993 CCCCCAGAGTGACG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17596 13 - 432965 CCCCCAGAGTGA-G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80577 14 + 85365473 CCCCCAGAGTGACG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919648 14 + 185818997 CCCCCAGAGTGACG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535621 14 + 192294377 CCCCCAGAGTGACG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4296877 14 - 9440265 CCCCCAGAGTGACG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886443 14 - 21915920 CCCCCAGAGTGACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26591 14 - 21531802 CCCCCAGAGTGACG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48212 14 - 2515279 CCCCCAGAGTGACG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206306 14 + 6586416 CCCCCAGAGTGACG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146573592 14 - 204313951 TCCGCAGAGTGACG i calJac3.chr2 C 0 C 0 s canFam3.chr6 60970785 3 - 77573801 ------AAG----- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2117363 0 - 8137123 C e aotNan1.NW_018514293v1 33786 83 + 376347 I e cebCap1.NW_016107703v1 410787 25 - 2125214 I a score=609966.000000 s hg38.chr7_KI270899v1_alt 56697 127 + 190869 CTGGAGAAAAGAAGCCCCAGGTCTCTCCCTTGCCCCTCTATTCCCCACCAACC--CAGCTGCCC-CAGCAGAGGGACAAAGGCCTGGTGATGCCTCTGTCCTGGGGACAGTGAGTGATGGGAAGGGGGCC s panTro5.chr7_NW_015973523v1_random 7775 127 - 29993 CTGGAGAAAAGAAGCCCCAGGTCTCTCCCTTGCCCCTCTATTCCCCACCAATG--CAGCTGCCC-CAGCAGAGGGACAAAGGCCTGGTGATGCCTCTGTCCTGGGGACAGTGAGTGATAGGCAGGGGGCC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17609 127 - 432965 CTGGAGAAAAGAAGCCCCAGGTCTCTCCCTTGCCCCTCTATTCCCCACCAACC--CAGCTGCCC-CAGCAGAGGGACAAAGGCCTGGTGATGCCTCTGTCCTGGGGACAGTGAGTGATGGGAAGGGGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80591 126 + 85365473 CTGGAGAAAAGACGCCCCAGGTCTCTCCCTTGCCCCTCTATTCCCCACCAACC--CAGCTGCCC-CGGCAGAGGGACAAAGGCCTGGTGATGCCTCTGTCCTGGGGACAGTGAGTGATGGGCA-GGGGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919662 121 + 185818997 TTGGAG---AGAAGCCCCA-GTCTCTCCCTTGCCCCTCTATTCCCCACCAACC--CAGCTGCCC-TGGCAGAGGGACAAAGGCCTGGTGATGCCTCTGTCCTGGGGACAGTGA--GATGGGCAGAGGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535635 121 + 192294377 TTGGAG---AGAAGCCCCA-GTCTCTCCCTTGCCCCTCTATTCCCCACCAACC--CAGCTGCCC-TGGCAGAGGGACAAAGGCCTGGTGATGCCTCTGTCCTGGGGACAGTGA--GATGGGCAGAGGGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4296891 121 - 9440265 TTGGAG---AGAAGCCCCA-GTCTCTCCCTTGCCCCTCTATTCCCCACCAACC--CAGCTGCCC-TGGCAGAGGGACAAAGGCCTGGTGATGCCTCTGTCCTGGGGACAGTGA--GATGGGCAGAGGGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886457 121 - 21915920 CTGAAG---AGAAGCCCCA-GTCTCTCCCTTGCCCCTCTATTCCCCACCAACC--CAGCTGCCC-TGGCAGAGGGACAAAGGCCTGGTGATGCCTCTCTCCTGGGGACAGTGA--GATGGGCAGAGGGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26605 121 - 21531802 TTGGAG---AGAAGTCCCA-GTCTCTCCCTTGCCCCTCTATTCCCCACCAACC--CAGCTGCCC-TGGCAGAGGGACAAAGGCCTGGTGATGCCTCTGTCCTGGGGACAGTGA--GATGGGCAGAGGGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48226 121 - 2515279 TTGGAG---AGAAGCCCCA-GTCTCTCCCTTGCCCCTCTATTCCCCACCAACC--CAGCTGCCC-TGGCAGAGGGACAAAGGCCTGGTGATGCCTCTCTCCTGGGGACAGTGA--GATGGGCAGAGGGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206320 124 + 6586416 CTGGAGAGAAGAAGCCCCA-GTCTCTCCCTTGCCCCTCTGTTCCCCACCAACC--CAGCTGCCC-TGGCAGAGGGACAAAGGCCTGGTGATGCCTCTGTCCTGGGGACAGTGA--GATGGGCAGGGGGCC i colAng1.NW_012117710v1 C 0 C 0 s canFam3.chr6 60970788 126 - 77573801 CCAGAGAAGAGAAGCTCCG-GTCT---TCCTACCCCTGTCTTCCCCACAAACCAACAGCCTCCCATGGTGGAGGGCCCAAGGCCTGGTTGGATCATCTCTCCAGGGGCAGTGAGTGGGGGACAGGGAGAC i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2117363 0 - 8137123 C e aotNan1.NW_018514293v1 33786 83 + 376347 I e cebCap1.NW_016107703v1 410787 25 - 2125214 I e calJac3.chr2 146573606 0 - 204313951 C a score=480743.000000 s hg38.chr7_KI270899v1_alt 56824 93 + 190869 CAGCGGGTTTGTCACCACTGGGATCTGACACATGCAGACTCCCAGGTATCCAATAATAAGTCTCATGACCAGCAGGGGCTAAGGGgtgt-------------tggg s panTro5.chr7_NW_015973523v1_random 7902 93 - 29993 CAGCGGGTTTGTCACCACTGGGATCTGACACATGCAGACTCCCAGGTATCCAATAATAAGTCTCATGACCAGCAGGGGCTAAGGGgtgt-------------tggg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17736 93 - 432965 CAGCGGGTTTGTCACCACTGGGATCTGACACATGCAGACTCCCAGGTATCCAATAACAAGTCTCATGACCAGCAGGGGCTAACGGgtgt-------------tggg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80717 93 + 85365473 CAGCGGGTTCGTCACCACTGGGATCAGACACAGGCAGACTCCCAGGTATCCAATAATGAGTCTCATGACCAGCAGGGGGTAAGGGgtgt-------------tggg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919783 93 + 185818997 CAGTGGGTTTGTCACCACTGGGATCGGACACCTGCAGACTCCCAGGTATCCAATAATAAGTATCATGACCAGCAGGGGCTAAGGGGTGT-------------TGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535756 93 + 192294377 CAGTGGGTTTGTCACCACTGGGATCGGACACCTGCAGACTCCCAGGTATCCAATAATAAGTATCATGACCAGCAGGGGCTAAGGGGTGT-------------TGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297012 93 - 9440265 CAGTGGGTTTGTCACCACTGGGATCGGACACCTGCAGACTCCCAGGTATCCAATAATAAGTATCATGACCAGCAGGGACTAAGGGGTGT-------------TGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886578 93 - 21915920 CAGTGGGTTTGTCACCACTGGGATCGGACACATGCAGACTCCCAGGTATCCAATAATAAGTATCATGACCAGCAGGGGCTAAGGGGTGT-------------TGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26726 93 - 21531802 CAGTGGGTTTGTCACCACTGGGATCGGTCACATGCAGACTCCCAGGTATCCAATAATAAGTATCATGACCAGCAGGGGCTAAGGGGTGT-------------TGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48347 93 - 2515279 CAGTGGGTTTGTCACCACTGGGATCGGACACATGCAGACTCCCAGGTATCCAATAATAAGTATCATGACCAGCAGGGGCTAAGGGGTGT-------------TGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206444 91 + 6586416 CAGTGGGTTTGTCACCACTGGGATCAGACACATGCAGACTCCCAGGTATCCAGTAATAAGTCTCATGACCAGCAGGGGCTAAGGGGTGT-------------TG-- i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2117363 91 - 8137123 CAGAGGGGTTGTCACCCCTGGGACCCGACAC--GCTGATT-----------ATTGCTGGGGTTCATGACCAGC--GAGCCTGTGCTTGTCTGTTCACATCCGTGTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60970914 72 - 77573801 ------------CAGCACAGGG-CCTGAAACATGCAAATTCCCAGGATTCCAATAATAAG----GTGAGCA----AGGTTAAGGGGCCT-------------TGGG i canFam3.chr6 C 0 I 5164 e aotNan1.NW_018514293v1 33786 83 + 376347 I e cebCap1.NW_016107703v1 410787 25 - 2125214 I e calJac3.chr2 146573606 0 - 204313951 C a score=108498.000000 s hg38.chr7_KI270899v1_alt 56917 22 + 190869 tgtgcgtttctgtgcttgtgtg s panTro5.chr7_NW_015973523v1_random 7995 22 - 29993 tgtgtgtttctgtgcttgtgtg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17829 22 - 432965 tgtgcgtttctgtgcttgtgtg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80810 22 + 85365473 tgtgtgtttctgtgcttgtgtg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919876 22 + 185818997 TGTGTTTTTCTGTCCTTGTGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535849 22 + 192294377 TGTGTTTTTCTGTCCTTGTGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297105 22 - 9440265 TGTGTTTTTCTGTCCTTGTGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886671 22 - 21915920 TGTGTTTTTCTGTCCTTGTGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26819 22 - 21531802 TGCATTTTTCTGTCCTTGTGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48440 22 - 2515279 TGTGTTTTTCTGTCCTTGTGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206535 21 + 6586416 -GTGTGTTTCTGTCCTTGTGTG i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2117454 22 - 8137123 TGCATGTTTCTGTGTGCGTGTG i otoGar3.GL873611 C 0 I 34778 e canFam3.chr6 60970986 5164 - 77573801 I e aotNan1.NW_018514293v1 33786 83 + 376347 I e cebCap1.NW_016107703v1 410787 25 - 2125214 I e calJac3.chr2 146573606 0 - 204313951 C a score=76652.000000 s hg38.chr7_KI270899v1_alt 56939 16 + 190869 tgtgAATTCCAAGAAT s panTro5.chr7_NW_015973523v1_random 8017 16 - 29993 tgtgAATTCCAAGAAT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17851 16 - 432965 tgtgAATTCCAAGAAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80832 16 + 85365473 tgtgAATTCCAAGGAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919898 16 + 185818997 TGTGGATTCCAAGGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535871 16 + 192294377 TGTGGATTCCAAGGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297127 16 - 9440265 TGTGGATTCCAAGGAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886693 16 - 21915920 TGTGGATTCCAAGGAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26841 16 - 21531802 TGTGGATTCCAAGGAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48462 16 - 2515279 TGTGGATTCCAAGGAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206556 16 + 6586416 TGTGGATTCCAAGGAT i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2117476 34778 - 8137123 I e canFam3.chr6 60970986 5164 - 77573801 I e aotNan1.NW_018514293v1 33786 83 + 376347 I e cebCap1.NW_016107703v1 410787 25 - 2125214 I e calJac3.chr2 146573606 0 - 204313951 C a score=386027.000000 s hg38.chr7_KI270899v1_alt 56955 83 + 190869 CTTTCTTAAATTCTGGACATCT-AGGGGCCAG----GGCTGTCACTTTCCACCATTTCTGAGAGCACAGACATGTGCACTGCCCCCTC s panTro5.chr7_NW_015973523v1_random 8033 83 - 29993 CTTTCTTAAATTCTGGACATCT-AGGGGCCAG----GGCTGTCACTTTCCACCATTTCTGAGAGCACAGACATGTGCACTGCCCCCTC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17867 83 - 432965 CTTTCTTAAATTCTGGACATCT-AGGGGCCAG----GGCTGTCACTTTCCACCATTTCTGAGAGCACAGACATGTGCACTGCCCCCTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80848 75 + 85365473 CTTTCTTAAATTCTGGACGCCTGGGGGGCCAG----GGCTGCCACTTTCCACCGTTTCTGAGAGCACA--------CACT-CCCCCTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919914 84 + 185818997 CTTTCTTAAATTCTGGACACCTGCGGGGCCAG----GGCTGTCACTTTCCACTTTTTCTGAGAGTAGAGACATGTGCActcctccctc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535887 84 + 192294377 CTTTCTTAAATTCTGGACACCTGCGGGGCCAG----GGCTGTCACTTTCCACTTTTTCTGAGAGCAGAGACATGTGCActcctccctc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297143 84 - 9440265 CTTTCTTAAATTCTGGACACCTGCGGGGCCAG----GGCTGTCACTTTCCACTTTTTCTGAGAGCAGAGACATGTGCACTCCTCCCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886709 84 - 21915920 CTTTCTTAAATTCTGGACACCTGCGGGGCCAG----GGCTGTCACTTTCCACTTTTTCTGAGAGCAGAGACATGTGCACTCCTCCCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26857 84 - 21531802 CTTTCTTAAATTCTGGACACCTGCGGGGCCAG----CGCTGTCATTTTCCACTTTTTCTGAGAGCAGAGACATGTGCACTCCTCCCTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48478 84 - 2515279 CTTTCTTAAATTCTGGACACCTGCGGGGCCAG----GGCTGTCACTTTCCACTTTTTCTGAGAGCAGAGACATGTGCACTCCTCCTTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206572 84 + 6586416 CTTTCTTAAATTCTGGACACCCGTGGGTCCAG----GGCTGTCACTTTCCAGTTTTTCTGAGAGCACAGACATGTGCACTCCTCCGCC i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2152254 83 - 8137123 CCCTCTCAAACTCTGGACACCC-AGTGATCAGTGATGGCTCTCATCTTCCA---TTACTGAGAACACAAAC-TAAGCACCTCTCCCTC i otoGar3.GL873611 I 34778 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e aotNan1.NW_018514293v1 33786 83 + 376347 I e cebCap1.NW_016107703v1 410787 25 - 2125214 I e calJac3.chr2 146573606 0 - 204313951 C a score=40573.000000 s hg38.chr7_KI270899v1_alt 57038 5 + 190869 CTCTC s panTro5.chr7_NW_015973523v1_random 8116 5 - 29993 CTCTC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17950 5 - 432965 CTCTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80923 5 + 85365473 CTCTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33919998 5 + 185818997 ctctc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535971 5 + 192294377 ctctc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297227 5 - 9440265 CTCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886793 5 - 21915920 CTCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26941 5 - 21531802 CTCTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48562 5 - 2515279 CTCTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206656 5 + 6586416 CTTTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146573606 5 - 204313951 CTCTC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 410812 5 - 2125214 CTCTC i cebCap1.NW_016107703v1 I 25 C 0 s otoGar3.GL873611 2152337 5 - 8137123 CCCTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e aotNan1.NW_018514293v1 33786 83 + 376347 I a score=621611.000000 s hg38.chr7_KI270899v1_alt 57043 104 + 190869 AGCCCCCCTCCCTTCTTCTTGCTCAGTGCTCCATACTCCCAGTCCCTTCAG---TTCAGGCCTGGAGGAGTCGCCCCTCCTGGA----------ACTGCTGAAGGGTGGGGAGGCAG s panTro5.chr7_NW_015973523v1_random 8121 103 - 29993 AGCCCCCCTCCCTTCTTCTTGCTCAGTGCTCCATACTCCCAGTCCCTTCAG---TTCAGGCCTGGAGGAGTCGCCCCTCCTGGA----------ACTGCTGAA-GGTGGGGAGGCAG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 17955 103 - 432965 AGCGCCCCTCCCTTCTTCTTGCTCAGTGCTCCATACTCCCAGTCCCTTCAG---TTCA-GCCTGGAGGAGTCGCCCCTCCTGGA----------ACTGCTGAAGGGTGGGGAGGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 80928 103 + 85365473 AGC-CCCCTCCCTTCTTCTTGCTCCATGCTCCACACTCCCGGTCCCTTCAG---TTCAGGCCTGGAGGAGTCGCCCCTCCTGGA----------GCTGCTGAAGGGTGGGGAGGCAG i nomLeu3.chr20 C 0 I 3 s rheMac8.chr3 33920003 89 + 185818997 agcccccctcccttcttcttgctcagtgctccatgctcccGGTCCCTTCGG---TTCG---------------CCCCTCCTGGA----------GCTGCTGAAGGGTGGGGAGGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33535976 89 + 192294377 agcccccctcccttcttcttgctcagtgctccatgctcccGGTCCCTTCGG---TTCG---------------CCCCTCCTGGA----------GCTGCTGAAGGGTGGGGAGGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297232 89 - 9440265 AGCCCCCCTCCCTTCTTCTTGCTCAGTGCTCCATGCTCCCGGTCCCTTCGG---TTCG---------------CCCCTCCTGGA----------GCTGCTGAAGGGTGGGGAGGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886798 89 - 21915920 AGCCCCCCTCCCTTCTTCTTGCTCAGTGCTCCATGCTCCCAGTCCCTTCGG---TTCG---------------CCCCTCCTGGA----------GCTGCTGAAGGGTGGGGAGGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 26946 89 - 21531802 AGCCCCCCTCCCTTCTTCTTGCTCAGTGCTCCATGCTCCCGGTCCCTTCGG---TTCG---------------CCCCTCCTGGA----------GCTGCTGAAGGGTGCGGAGGCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48567 89 - 2515279 AGCCCCCCTCCCTTCTTCTTGCTCAGTGCTCCACGCTCCCGGTCGCTTCGG---TTCA---------------CCCCTCCTGGA----------GCTGCTGAAGGGTGGGGAGGCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206661 88 + 6586416 AGCCCCCCTCCCTTCTCCTCGCTCAGTGCTCCGTGCTCCCGGTCCCTTCGG---TTCG---------------CCCCTCGTGGA----------GCTGCTGAGGGGTG-GGAGGCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146573611 104 - 204313951 AGCCCTCCTCCCTTCTCCTTGATCAATGATCCAGACACTAGATCCCTTCAG---TTCAGGCCTGGAGGAGTCGCCCCTCTTAGA----------GCTGCTGAAGGGTGGGGAGGCAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 410817 104 - 2125214 AGCCCTCCTCTCTTCTCCTTGCTCAATGCTCCAGACACCCGATCCCTTCAG---TTCAGGCCTGAAGGAGTCGTCCCTCCTGGA----------GCTGCTGAAGGGTAGGGAGGCAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 33869 93 + 376347 AGCCCTCCTCCCTTCTCCTTGCTCAGTGCTCCAGACACCCGAGCCCTTCAT---TTCAGGCCTGGAGTCGCCGCCCCTCCAGGA----------GCTGCCGAAGGG----------- i aotNan1.NW_018514293v1 I 83 C 0 s otoGar3.GL873611 2152342 101 - 8137123 AGC------CCCTTCTTCCCTCTCA----TCCTTGCT---GGTGCCTTTTGTGTTTCA-GCTTGGAGGAGTC-TTCCACCTCGAGTCCTGTGATGCTGCTGA-GGCTGGGAAGTCAG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I a score=825337.000000 s hg38.chr7_KI270899v1_alt 57147 119 + 190869 CTTTCTGGACAGAGGAGCAGGCAGGGA-GGGTGCTCCCCCTTGCAGGCTGTTCTGAAGGGTGGATTCTTCTTGCTGCTTCTTGGGAGAC----TGCATGCCCAAGGGAGCACAGCCA-TGCCAGC s panTro5.chr7_NW_015973523v1_random 8224 119 - 29993 CTTTCTGGACAGAGGAGCAGGCAGGGA-GGGTGCTCTCCCTTGCAGGCTGTTCTGAAGGGTGGATTCTTCTTGCTGCTTCTTGGGAGAC----TGCAGGCCCAAGGGAGCACAGCCA-TGCCAGC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 18058 119 - 432965 CTTTCTGGACAGAGGAGCAGGCAGGGA-GGGTGCTCTCCCTTGCAGGCTGTTCTGAAGGGTGGATTCTTCTTGCTGCTTCTTGGGAGAC----TGCATGCCCAAGGGAGCACAGCCA-TGCCAGC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33920092 119 + 185818997 CTCTCGGGACAGAGGAGCAGGCAGGGA-GGGTGCTCTCCCCTGCAGGCTGTTCTGAGGGGTGGATTCTTCTTGCTACTTCCTGGGAGAC----TGCATGCCCAAGGGAGCACAGCCG-TGCCAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33536065 119 + 192294377 CTCTCGGGACAGAGGAGCAGGCAGGGA-GGGTGCTCTCTCCTGCAGGCTGTTCTGAGGGGTGGATTCTTCTTGCTACTTCCTGGGAGAC----TGCATGCCCAAGGGAGCACAGCCG-TGCCAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297321 119 - 9440265 CTCTCGGGACAGAGGAGCAGGCAGGGA-GGGTGCTCTCTCCTGCAGGCCGTTCTGAGGGGTGGATTCTTCTTGCTACTTCCTGGGAGAC----TGCATGCCCAAGGGAGCACAGCCG-TGCCAGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16886887 119 - 21915920 CTCTCGGGACAGAGGAGCAGGCAGGGA-GGGTGCTTTCCCCTGCAGGCTGTTCTGAGGGGTGGATTCTTCTTGCTACTTCCTGGGAGAC----TGCATGCCCAAGGGAGCACAGCCA-TGCCAGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 27035 123 - 21531802 CTCTCGGGACAAAGGAGCAGGCAGGGA-GGGTGCTCTCCCCTGCAGGCTGTTCTGAGGGGTGGATTCTTCTTGCTACTTCCTGGGAGACTGCATGCATGCCCAAGGGAGCACAGCCG-TGCCAGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48656 119 - 2515279 CTCTCGGGACAGAGGAGCAGGCAGGGA-GGGTGCTTTCCCCTGCAGGCTGTTCTGAGGGGTGGATTCTTCTTGCTACTTCCTGGGAGAC----TGCATGCCCAAGGGAGCACAGCCA-TGCCAGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206749 117 + 6586416 CTCTCTGGACAGAGGAG-AGGCAGGGA-GGGTGCTCTCCCCTGCAGGCTGTTCTGAGGGGTGGGTCCTTCTTGCTACTTCTTGGGAGAC----TGCATG-CCAAGGGAGCACAGCCG-TGCCAGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146573715 118 - 204313951 CTCTCTGGACACAGGAGCAGGCAGGGA-GGGTGCTCTCCCCTGCAGGCTGTTCTGA-GGGTGGATTCTTCTTGCTGCTTCTTGGGAGAC----TGCATGCCCAAGGCGGCACAGCCA-CGCCAGT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 410921 119 - 2125214 CTCTCTGGACAGAGGAGCAGGCAGAGA-GGGTGCTCTCTCCTGCAGGCTGTTCTGAGGGGTGGATTCTTCTTGCTGCTTCTTGGGAGAC----TGCATGCCCAAGGGGGCACAGCCA-TGCCAGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 33962 115 + 376347 ---TCTGGACGGAGGAGCAGGGCGGGC-GGGTGCTCTCCCCCGCAGGCTGTTCTGA-GGGGTGATTCTTCTTGCGGCTTCTCGGGAGAC----TTCATGCCCACGGGGGCACAGCCA-CGCCAGC i aotNan1.NW_018514293v1 C 0 I 59 s otoGar3.GL873611 2152443 113 - 8137123 --CTCTGGAGAGAGGAAAAGGGAGGGGCGGGAGCTCTCCTCTGTGGTCTGCTCGGAGGG------TCTCCTGGCCGCTTCCTGTGAGAT----CTCACACTCAAGGGAGCACAGTGACTGCCTGC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e nomLeu3.chr20 81031 3 + 85365473 I a score=530273.000000 s hg38.chr7_KI270899v1_alt 57266 99 + 190869 CTCACGTGAC-TCATCTGAAGTCACAGCCAGCTCTGTAACCTGCTCCGTTGTCGTGAGGCTTTGTCCTTGCTTTGTCCC-CACCACTCTGAGCCTGTATGT s panTro5.chr7_NW_015973523v1_random 8343 99 - 29993 CTCACGTGAC-TCGTCTGAAGTCACAGCCAGCTCTGTAACCTGCTCCGTTGTCGTGAGGCTCTGTCCTTGCTTTGTCCC-CACCACTCTGAGCTTGCTCGT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 18177 99 - 432965 CTCACGTGAC-TCATCTGAAGTCACAGCCAGCTCTGTAACCTGCTCCATTGTTGTGGGGCTTTGTCCTTGCTTTGTCCC-CACCACTCTGAGCCTGTATGT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33920211 99 + 185818997 CTCGCGTGAC-CCGTCTGAAGTCACAGCCAGCTCTGTAACCTGCCCCATTGCCGTGAGGCTCTGTCCTTGCTTTGCTCC-AACCACTCTGAGCCTGCCTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33536184 99 + 192294377 CTCGCGTGAC-CCGTCTGAAGTCACAGCCAGCTCTGTAACCTGCCCCATTGCCGTGAGGCTCTGTCCTTGCTTTGCTCC-AACCACTCTGAGCCTGCCTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297440 99 - 9440265 CTCGCGTGAC-CCGTCTGAAGTCACAGCCAGCTCTGTAACCTGCCCCATTGCCGTGAGGCTCTGTCCTTGCTTTGCTCC-AACCACTCTGAGCCTGCCTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16887006 99 - 21915920 CTCGCGTGAC-CCGTCTGAAGTCACAGCCAGCTCTGTAACCTGCCCCGTTGTCGTGAGGCTCTGTCCTTGCTTTGCTCc-aaccactctgagcctgcctgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 27158 99 - 21531802 CTCGCGTGAC-CCGTCTGAAGTCACAGCCAGCTCTGTAACCTGCACCGTTGTCGTGAGGCTCTGTCCTCGCTTTGCTCC-AACCACTCTGAGCCTGCCTGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48775 99 - 2515279 CTCGCGTGAC-CCGTCTGAAGTCACAGCCAGCTCTGTAACCTGCCCCGTTGTCATGAGGCTCTGTCCTTGCTTTGCTCC-AACCACTCTGAGCCTGCCTGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206866 91 + 6586416 CTCGCGTGAC-CCGTCTGAAGTCACAGCCAGCTCTGTAACCTGCCCCGTTGTCGTGAGGCTCT--------TTTGCTCc-aaccactctgagcctgcctgt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146573833 90 - 204313951 CTCGCATGAC-TTGTCTGAAGTCACAGCCAGCTCCATAACCTGCCCCATTGTCACAAGGCTCGGTCTTTGCCTTGCCCC-TACCACACTGAG--------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 411040 90 - 2125214 CTTGCATGAC-TCGTCTGAAGTCACAGCCAGCTCCATAAGCTGCCCCATTGTCGTAAGGCTCAGTCTTTGCTTTGTCCC-CACCACGCTGAG--------- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2152556 97 - 8137123 CTTGCCTGGCTCCTTCAGAAGTCACGGCCGGCTCCACAACACGTCCCGTTGT----ATGATCTGACCTTCCTCTGTCCCTCACTGCTCTGAGGTCGCATGT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e aotNan1.NW_018514293v1 34077 59 + 376347 I e nomLeu3.chr20 81031 3 + 85365473 I a score=91445.000000 s hg38.chr7_KI270899v1_alt 57365 34 + 190869 CCTGCATGTTGCACA--CAGCTCAGCCTCACTTGGG s panTro5.chr7_NW_015973523v1_random 8442 34 - 29993 CCTGCAGGGTGCACA--CAGCTCAGCCTCACTTGGG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 18276 34 - 432965 CCTGCATGTTGCACA--CAGCTCAGCCTCACTTGGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33920310 18 + 185818997 CCTGCATGGTGCACA--CAG---------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33536283 18 + 192294377 CCTGCATGGTGCACA--CAG---------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297539 18 - 9440265 CCTGCATGGTGCACA--CAG---------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16887105 18 - 21915920 cctgcatggtgcaca--cag---------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 27257 18 - 21531802 CCTGCATGGTGCACA--CAG---------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48874 18 - 2515279 CCTGCATGGTGCACA--CAG---------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206957 18 + 6586416 cctgcatggtgcaca--cag---------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146573923 34 - 204313951 CCTGCATGGTTCATG--TAGCTCAGGCTCACTGGGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 411130 34 - 2125214 CCTGCATGGTTCATG--TAGCTCAGCCTCACTGGGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 34136 34 + 376347 CCTGCACGGTGCACG--CAGCCCAGCCTCCCTGGGG i aotNan1.NW_018514293v1 I 59 C 0 s otoGar3.GL873611 2152653 36 - 8137123 TCTACGCGGTGTGTAAGCTGCTGCATCTCACCTTGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e nomLeu3.chr20 81031 3 + 85365473 I a score=1670234.000000 s hg38.chr7_KI270899v1_alt 57399 238 + 190869 CCCCACTTCCCAGAGAAGCCAGGAGCAGACGTTCCTCTCAGAGCTCTCAGCGCCCGGTGGGGCAGGGCCCTTTAATCACGCCATGAAAGACAGCAAGGACATGAGTCTCTGCTTA---GTTACTATCTAGGTCTCTGTGGTCCAGCCGGGGAAGGGGTGGAGGCAGCATGTTCCCTGCTGTGGCCAAACTAGGCCGCTGGGCCCCGGGTGCTGGCCTGCCAGGTGCTGTGGGGT------CTGCCCC-- s panTro5.chr7_NW_015973523v1_random 8476 238 - 29993 CCCCACTTTCCAGAGAAGCCAGGAGCAGACGTTCCTCTCAGAGCTCTCAGCGCCCAGTGGGGCAGGGCCCTTTAATCACGCCATGAAAGACAGCAAGGACATGAGTCTCTGCTTA---GTTACTATCTAGGTCTCTGTGGTCCAGCCAGGTAAGGGGTGGAGGCAGCATGTTCCCTGCTGTGGCCAAACTAGGCCGCTGGGCCCCGGGTGCTGGCCTGCCAGGTGCTGTGGGGT------CTGCCCC-- i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 18310 238 - 432965 CCCCACTTCCCAGAGAAGCCAGGAGCAGACGTTCCTCTCAGAGCTCTCAGCGCCCGGTGGGGCAGGGCCCTTTAATCACGCCATGAAAGACAGCAAGGACATGAGTCTCTGCTTA---GTTACTATCTAGGTCTCTGTGGTCCAGCTGGGGAAGGGGTGGAGGCAGCATGTTCCCTGCTGTGGCCAAACTAGGCCGCTGGGCCCCGGGTGCTGGCCTGCCGGGTGCTGTGGGGT------CTGCCCC-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 81034 238 + 85365473 CCCCACTTTCCAGAGAAGCCAGGAGCAGACATTCCTCTCAGAGCTCTCAGTGCCTGGTGGGGCAGGGCCCTTTAATCACCCCAGGAAAGACAGCAAGGACGTGAGTCTCTGCTTA---GTTATTATCTGGGTCTCTGTGGTCCAGCCGGGGAAGGGGTGGAGGCGGCATGTTCCCTGCTGTGGCCAAACAAGGCCACTGGGCCCCGGGTGCTGGCCTGCCAGGTGCTGTGGGGT------CTGCCCC-- i nomLeu3.chr20 I 3 C 0 s rheMac8.chr3 33920328 228 + 185818997 ----------CAGAGAAGCCAGGTGCAGGTATTTCTCTCGGAGCTCTCAGTGACCGGCGGGGCAGGGCCCTTTAATCACACCATGAAAGACAGCAAGGACGTGAGTCTCTGCTTA---GTCATTATCTGGGTCTCTGTGGTCTAGCCGGGGCAGGAGTGGAGGCGGCATGTTCCTTGCTGCGGCCAAGCAAGGCTGCTGGGCCCCAGGTGCTGGCCTGCCAGGTGCTGTGGGGT------CTGCCCC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33536301 228 + 192294377 ----------CAGAGAAGCCAGGTGCAGATATTTCTCTCGGAGCTCTCAGTGACCGGCGGGGCAGGGCCCTTTAATCACACCATGAAAGACAGCAAGGACGTGAGTCTCTGCTTA---GTCATTATCTGGGTCTCTGTGGTCTAGCCGGGGCAGGAGTGGAGGCGGCATGTTCCTTGCTGCGGCCAAGCAAGGCTGCTGGGCCCCAGGTGCTGGCCTGCCAGGTGCTGTGGGGT------CTGCCCC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297557 228 - 9440265 ----------CAGAGAAGCCAGGTGCAGATATTTCTCTCGGAGCTCTCAGTGACCGGCGGGGCAGGGCCCTTTAATCACACCATGAAAGACAGCAAGGACGTGAGTCTCTGCTTA---GTCATTATCTGGGTCTCTGTGGTCTAGCCGGGGCAGGAGTGGAGGCGGCATGTTCCTTGCTGCGGCCAAGCAAGGCTGCTGGGCCCCAGGTGCTGGCCTGCCAGGTGCTGTGGGGT------CTGCCCC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16887123 228 - 21915920 ----------cagagaagccaggcgcagacgttcctctcggagctctcagtgaccggcggggcagggccctttaatcacaccatgaAAGACAGCAAGGACGTGAGTCTCCGCTTA---GTCATTATCTGGGTCTCTGTGGTCCAGCCGGGGCAGGAGTGGAGGCGGCATGTTCCTTGCTGCGGCCAAGCAAGGCGGCTGGGCCCCAGGTGCTGGCCTGTCAGGTGCTGTGGGGT------CTGCCCC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 27275 228 - 21531802 ----------CAGAGAAGCCAGGCACAGACGTTCCTCTCGGAGCTCTCAGTGACCGGCGGGGCAGGACCCTTTAATCACACCATGAAAGACAGCAAGGACATGAGTCTCTGCTTA---GTCATTATCTGGGTCTCTGTGGTCCAGCCGGGGCAGGAATGGAGGCGGCATGTTCCCTGCTGCGGCCAAGCAAGGCTGCTGGGTCCCAGGTGCTGGCCTGCCAGGTGCTGTGGGGT------CGGCCCC-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 48892 228 - 2515279 ----------CAGAGAAGCCAGGTGCAGACGTTCCTCTCGGAGCTCTCAGTGACCGGCGGGGCAGGGCCCTTTAATCACACCATGAAAGACAGCAAGGACGTGAGTCTCCGCTTA---GTCATTATCTGGGTCTCTGTGGTCCAGCCGGGGCAGGAGTGGAGGTGGCATGTTCCTTGCTGCGGCCAAGCAAGGCGGCTGGGCCCCAGGTGCTGGCCTGCCAGGTGCTGTGGGGT------CTGCCCC-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 206975 228 + 6586416 ----------cggagaagccaggtgcagaccttcctctcggagctctcagtacccggcggggcagggccctttaatcacgccatgaAAGACGGCGAGGACGTGAGTCTCCGCTTA---GTCATTATCTGGGTCTCTGTGGTCCAGCCGGGGCAGGAGTGGAGGCGGCATGTTCCCCGCTGCGGCTAAGCAAGGCTGCTGGGCCCCGGGTGCTGGCCTGCCAGGTGCTGTGGGGT------CTGCCCT-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146573957 240 - 204313951 CCCCACTTTCCAGAGAAGCCAGGAGCAGATGTTTCCCCTGGAGCTCATGGTGCCTGGTGGGGCGGGGCCCTTTAATCATGCAATGAAAGACAGCAAGGACATGAGTCTCTGCTTAATTATTATTATATAGATCCCTGTGGTACCCCTGGACGACAGG-GATGGCATCATGGTCCCTGCTGTGGCCAAATGAGGCTGCTGGGCCCTGGATGCTGGCCTGCCAGGTGCTGTGGGGT------CTGCCAC-- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 411164 237 - 2125214 CCCCACTTTTCAGAGAAGCCAGGAGCAGACGTTGCCCTTGGAGCTCACGGTGCCTGGTGGGGCGGGGCCCTTTAATCACGCGATAAAAGACAGCAAGGACGTGAGTCTCTGCTTA---GTTATTATACAGATCCCTGTGGTCCAGCCAGGGGACAGG-GATGGCATCATGGTCCCTGCTGTGGCCAAATGAGGCTGCTGGGCCCCGGATGCTGGCCTGCCAGGCACTGTAGGGT------CTGCCAC-- i cebCap1.NW_016107703v1 C 0 I 18 s aotNan1.NW_018514293v1 34170 239 + 376347 CCCCGCTTTCCAGGGAAGCCAGGAGCGGACGTTTCCCCCGGAGCTCACGGTGCCCGGTGGGGCGGGGCCCTTTAATCGCGCGATGAAAGACACCAAGGACGTGAGCCTCTGCTTAGTAATTATTATACAGATCGCTGTGGTCCAGCCGGGGGACAGG-GGTGGCATCATGGTCCCTGCTGTGGCCGAATGAAGCCGCTGGGTCCTGAGTGCT-GCCCGCCGGGCACCGCGGGGT------CTGCCCC-- i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 2152689 220 - 8137123 CCCTGATTTCCAGAAAACCCAGGTGTAGACAGTCCACAAGGAGTTCTTGCTGCCCAGGGGGGTGCAGTCCTTTAATCATTCC-----------------------TCCTTGCTGA---GATTTGATCTGGGTTCCTGCTACCCAGCCCTGACAGAGACTGGGGCA-CTTGCTCCCCACT--GGCCAACTGCAGCTGCTGGGCACTGGGCGCTGGCCTGGAGAGGTCCGTGTGCTCCTGTGCTGCTCCCC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I a score=130235.000000 s hg38.chr7_KI270899v1_alt 57637 22 + 190869 GTG-CATCTTGTGCAGAGGCCCT s panTro5.chr7_NW_015973523v1_random 8714 22 - 29993 GTG-CATCTCGTGCAGAGGCGCT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 18548 22 - 432965 GTG-CATCTCGTGCAGAGGCGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 81272 22 + 85365473 GTG-CATCTCGTGCAGAGGTGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33920556 22 + 185818997 GTG-CATCCCCTGCAGAGGTGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33536529 22 + 192294377 GTG-CATCCCCTGCAGAGGTGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297785 22 - 9440265 GTG-CATCCCCTGCAGAGGTGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16887351 22 - 21915920 GTG-CATCCCCTGCAGGGACGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 27503 22 - 21531802 GTG-CATCCCCTGCAGAGGCGCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 49120 22 - 2515279 GTG-CATCCCCTGCAGGGACGCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 207203 22 + 6586416 GTG-CATCCCATGCAGAGGCGCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146574197 19 - 204313951 ----CATCGCACGCAGAGGCACT i calJac3.chr2 C 0 C 0 s aotNan1.NW_018514293v1 34410 22 + 376347 GTG-CGTCACACGCAGAGGCGCT i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2152909 23 - 8137123 ATGTTGTCTCACACAGAGATGCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e cebCap1.NW_016107703v1 411401 18 - 2125214 I a score=873589.000000 s hg38.chr7_KI270899v1_alt 57659 114 + 190869 CCCCAGGCCCCACTGGACCACGGCTAAGGCTGAGCTTTAACTCGTTTGTATAAAAGCAGA-----------------------------------------------TTTCAGGTGTACTAACTGAACAAGACG-ATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC s panTro5.chr7_NW_015973523v1_random 8736 114 - 29993 CCCCAGGCCCCACTGGACCACGGCTAAGGCTGAGCTTTAATTCGTTTGTATAAAAGCAGA-----------------------------------------------TTTCAGGCATATTAACTGAACAAGACG-ATGCTTTTAAAAATGAAG----------------------------------------------------------------------------------------------AGTGGCAAC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 18570 114 - 432965 CCCCAGGCCCCACTGGACCACGGCTAAGGCTGAGCTTTAATTCGTTTGTATAAAAGCAGA-----------------------------------------------TTTCAGGGGTACTAACTGAACAAGATG-ATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 81294 114 + 85365473 CCCCAGGCCCCACTGGACCACGGCTAAGGCTGAGCTTCAATTCGTTTGTATAAAAGCAGA-----------------------------------------------TTTCAGGTGTACTAACTGAACAAGACG-ATGCTTTTAAAAGTCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33920578 115 + 185818997 CCCCAGGCCCCACTGGACCACGGCTAAGGCTGAGCTTTAATTCGTTTGTATACAAGCAGA-----------------------------------------------TTTCAGGTGTACTAACTGAACAAGATGCATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33536551 115 + 192294377 CCCCAGGCCCCACTAGACCACGGCTAAGGCTGAGCTTTAATTCGTTTGTATACAAGCAGA-----------------------------------------------TTTCAGGTGTACTAACTGAACAAGATGCATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297807 115 - 9440265 CCCCAAGCCCCACTAGACCACGGCTAAGGCTGAGCTTTAATTCGTTTGTATACAAGCAGA-----------------------------------------------TTTCAGGTGTACTAACTGAACAAGATGCATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16887373 115 - 21915920 CCCCAGGCCCCACTGGACCATGGCTAAGGCTGAGCTTTAATTCGTTTGTATACAAGCAGA-----------------------------------------------TTTCAGGTGTACTAACTGAACAAGATGCATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 27525 115 - 21531802 CCCCAGGCCCCACTGGACCACGGCTAAGGCTGAGCTTTAATTCGTTTGTATACAAGCAGA-----------------------------------------------TTTCAGGTGTACTAACTGAACAAGATGCATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 49142 115 - 2515279 CCCCAGGCCCCACTGGACCACGGCTAAGGCTGAGCTTTAATTCGTTTGTATACAAGCAGA-----------------------------------------------TTTCAGGTGTACTAACTGAACAAGATGCATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 207225 114 + 6586416 CCCCAGGCCCCACTGGACCATGGGTAAGGCTGAGCTTTAATTCGTTTGT-TACAAGCAGA-----------------------------------------------TGTCAGGGGTACTAACTGAACAAGACGCGTGCTTCTAAAAATCGAG----------------------------------------------------------------------------------------------AGTGGCAAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146574216 115 - 204313951 CCCCAGTCCCCACTGGGTCACGGCTAAGGCTGAGCTTTAATACATTTGTATAAAAGCAGA-----------------------------------------------TTCTAGGTGTACTAACTGAACATGAGGCATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 411419 115 - 2125214 CCCCAGTCCCCCCTGGGTCATGGCTAAGGCTGAGCTTTAATTCGTTTGTACAAAAGCAGA-----------------------------------------------TTCTAGGTGTACTAACTGAACATGATGCATGCTTTTAAAAATCAAG----------------------------------------------------------------------------------------------AGTGGCAAC i cebCap1.NW_016107703v1 I 18 C 0 s aotNan1.NW_018514293v1 34432 115 + 376347 CCCCAGGCCCCACTGGGTCACGGCTAAGGCTGAGCTTTAATTCGTTTGTATAAAAGCAGA-----------------------------------------------TTCTAGGTGTACTAACTGAACACGATGCACGCGCTTAAAAATCAAG----------------------------------------------------------------------------------------------AGCGGCAAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2152932 256 - 8137123 CCATAGGCCCTGATAGGCCATGGCCAAGGCTACACTTTAATTTGTTTGTATTAAAGCAGAATAATTGAAAATTATTCGATTTCTCTCTAATAAGGGAGAAGACACTTCTACAAATGGAAAAATTGAATGTGACATATGATTTTAAAAATCAAAGCAATggttcagtgcctgtagcacagcagttacgacatcagccacatacaccagagctggctggttcgaaccaggccaggaccagctgaacaacaatgacaac i otoGar3.GL873611 C 0 I 173 e canFam3.chr6 60970986 5164 - 77573801 I a score=1183168.000000 s hg38.chr7_KI270899v1_alt 57773 161 + 190869 AAAAGAGCAAGGGGCCACGCCCCAAGGTCCCACCCGAACACCTCCCAGTAAGTG-ACGGCAACACAGGAGACTTAAGGG-----ATTCAACGGACACGTCCTTTAGCCAAGATGTGGCATTTCTGTCTGTAATGTGAACACTTCCTTATATGATGGGGGTTAGTAAA s panTro5.chr7_NW_015973523v1_random 8850 161 - 29993 AAAAGAGCAAGGGGCCACGCCCCAAGGTCCGACCTGAACACCTCCCAGTAAGTG-ACGGCAACACAGGAGACTTAAGGG-----ATTCAACGGACACGTCCTTTAGCCAAGATGTGGCATTTCTGTCTGTAATGTGAACACTTCCTTATATGATGGGGGTTAATAAA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s gorGor5.CYUI01015914v1 18684 161 - 432965 AAAAGAGCAAGGGGCCACGCCCCAAGGTCCCACCTGAACACCTCCCAGTAAGTG-ACGGCAACACAGGAGACTTAAGGG-----ATTCAATGGACACGTCCTTTAGCCAAGATGTGGCATTTCTGTCTGTAATATGAACACTTCCTTATATGATGGGGGTTAGTAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 81408 165 + 85365473 AAAAGAGCAAGGGGCCACGCCCCAAGGTCCGACCTGAACACCTCCCA-TAAGTG-ACAGCAACACAGGAGACTTAAGGGTAGGAATTCAACGGACACGTCCTTCAGCCAAGATGTGGCATTTCTGTCTGTAATATGAACACATCCTTATATGATAGGGGTTAGTAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33920693 166 + 185818997 AGAACAGCAAGGGGCCATGCCCCAAGGCCCGACCTGGACACCTCCCAGTAAGTG-ACAGTAACGCAGGAGACTTAAGGGTAGGAATTCAATGGACACATCCTTTAGCCAAGATGTGGCATTTCTGTCTGTAATATGAACACACCCTTATATGACAGGGGTTAGTAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33536666 166 + 192294377 AGAAGAGCAAGGGGCCACGCCCCAAGGCCCGACCTGGACACCTCCCAGTAAGTG-ACAGTAACGCAGGAGACTTAAGGGTAGGAATTCAATGGACACATCCTTTAGCCAAGGTGTGGCATTTCTGTCTGTAATATGAACACACCCTTATATGACAGGGGTTAGTAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4297922 166 - 9440265 AGAAGAGCAAGGGGCCACGCCCCAAGGCCCGACCTGGACACCTCCCAGTAAGTG-ACATTAACGCAGGAGACTTAAGGGTAGGAATTCAATGGACACATCCTTTAGCCAAGGTGTGGCATTTCTGTCTGTAATATGAACACACCCTTATATGACAGGGGTTAGTAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16887488 166 - 21915920 AGAAGAGCAAGGGGCCATGCCCCAAGGCCCGACCTGGACACCTCCCAGTAAGTG-ACAGTAACGCAGGAGACTTAAGGGTAGGAATTCAATGGACACATCCTTTAGCCAAGATGTGGCATTTCTGTCTGTAATATGAACACATCCTTATATGACAGGAGTTAGTAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 27640 166 - 21531802 AGAAGAGCAATGGGCCACGCCCCAAGGCGCGACCTGGACACTTCCCGGTAAGTG-ACAGTAACGCAGGAGACTTAAGGGTAGGAATTCAATGGACACATCCTTTAGCCAAGATGTGGCATTTCTGTCTGTAATACGAACACATCCATATATGACAGGGGTTAGTAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 49257 166 - 2515279 AGAAGAGCAAGGGGCCATGCCCCAAGGCCCGACCTGGACACCTCCCAGTAAGTG-ACAGTAACGCAGGAGACTTAAGGGTAGGAATTCAATGGACACATCCTTTAGCCAAGATGTGGCATTTCTGTCTGTAATATGAACACATCCTTATATGACAGGGGTTAATAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 207339 165 + 6586416 AGAAGAGCGA-GGGCCACGCCCCAAGGCCCGACCTGGATACCTCCCAGTAAGTG-ACAGTAACGCAGGAGACTTAAGGGTAGGAATTCAATGGACACATCCTTTAGCCAAGATGTGGCATTTCTGTCTATAACATGAACACATCCTTACATGACAGGGGTTAGTAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146574331 161 - 204313951 AACAGAGC-AGGGGACACACCACAAGGCCTGACCTGAACACCTC----CAAGTG-ACAGCAACACAGGAGACTTACGGGTGGGAATTCAATGGGCACATCCTTTAGCCAATATGTGAAGTTTCTGTCTGTACTATGAGCACATTCTTACAGGATAGGGGTTTGTAAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 411534 166 - 2125214 AACAGAGCAAGGGGTCACACCCCGAGGCCTGACCTGAACACCTCCCAGCAAGTG-ACAGCAACACAGGAGACTTACTATTGGGAACTCAACAGGCACATCCTTTAGCCAAGATGTGGAGTTTCTGTCTGTACTATGAACACATTCTTCCAGGATAGGGGTTTGTAAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 34547 165 + 376347 AACAGAGCGAGGGGACACACCCCGAGGCCCGACCTGAACCCCTCCCAGCAAGTG-ACAGCAGCACAGGAGACGTACGCGTGGGAATTCAACGGGCACATCCCTTAGCCAAGGTGTGGAGTTTCTGTCT-TACTATGAACACATTCTTACAGGATAGGGGTTTGTAAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2153361 137 - 8137123 AACAGAGCGAAGGGACACATCCCAAGGCCCAAGCTGCATGCTTCCCAGTCAGTGAATTATGTGAAAGGAGATGTAAGGGTGGGCGTTAAACTACCATATC--------------TGGAGTTTCTCTCTGGGATGTGAAT----------------GGGCTTAGTAAA i otoGar3.GL873611 I 173 C 0 e canFam3.chr6 60970986 5164 - 77573801 I a score=2686615.000000 s hg38.chr7_KI270899v1_alt 57934 347 + 190869 CATCCCCCATTCCTC-AGGTG----GGGACAGTCACATGCTTGCAGG-AGGATTTTCCTATTACGGGGCTGAGACCAGTGAGGCAATGATCTTGGAAGCTGCCATTAGTCACCATCTGGGCAAGCAGCTGTTACAGTGTGCAG------------------------------------------------------------------------TGTTACCCTTCAGCTCTGGGG----------------------TTCTTTGAGCCCTGCCGGCGTGTCCTTGCTGACCGTCTCTGATTGGGGCCAGGCTGTGGGTGTTCCCGGCCAtcagagctgc-cggg-ggaccctgg----agagcagctttcccaactgtgtcatcatagagaaaaggaagccgaggccACGGTCCACAGCTGGGGGCACAATCAGGTGAGAATTCTAATTCCT s panTro5.chr7_NW_015973523v1_random 9011 347 - 29993 CATCCCCCATTCCTC-AGGTG----GGGACAGTCACATGCTTGCAGG-AGGATTTCCCTATTACGGGGCTGAGACCAGTGAGGCAATGATCTTGGAAGCTGCCGTGAGTCACCATCTGGGGAAGCAGCTGTTACAGTGTGCAG------------------------------------------------------------------------TGTTACCCTTCAGCTCTGGGG----------------------TTCTTTGAGCCCTGCCGGCGTGACCTTGCTGACCGTCTCTGATTGGGGCCAGGCTGTGGGTGTTCCCGGCCAtcagagctgc-cggg-ggaccctgg----agagcagctttcccaactgtgtcgtcatagagaaaaggaagccgaggccACTGTCCAAAGCTGGGGGCACAATCAGGTGAGAATTCTAATTCCT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 0 348 + 9642 CATCCCCCATTCCTCGAGGTG----GGGACAGTCACATGCTTGCAGG-AGGATTTCCCTATTACGGGGCTGAGACCAGTGAGGCAATGATCTTGGAAGCTGCCGTTAGTCACCATCTGGGCAAGCAGCTGTTACAGTGTGCAG------------------------------------------------------------------------TGTTACCCTTCAGCTCTGGGG----------------------TTCTTTGAGCCCTGCCGGCGTGACCTTGCTGACTGTCTCTGATTGGGGCCAGGCTGTGGGTGTTCCCGGCCAtcagagctgc-cagg-ggaccctgg----agagcagctttcccaactgtgtcatcatagagaaaaggaagtcgaggccACTGTCCACAGCTGGGGGCACAATCAGGTGAGAATTCTAATTCCT i panPan2.chrUn_NW_014023765v1 N 0 C 0 s gorGor5.CYUI01015914v1 18845 347 - 432965 CATCCCCCATTCCTC-AGGTG----GGGACAGTCACATGCTTGCAGG-AGGATTTTCCTATTACGGGGCTGAGACCAGTGAGGCAATGATCTTGGAAGCTGCCGTCAGTCACCATCTGGGCAAGCAGCTGTTACAGTGTGCAG------------------------------------------------------------------------TGTTACCCTTCAGCTCTGGGG----------------------TTCTTTGAGCCCTGCCGGCGTGACCTTGCTGACCGTCTCTGATTGGGGCCAGGCTGTGGGTGTTCCCGGCCAtcagagctgc-cagg-ggaccctgg----agagcagctttcccaactgtgtcatcatagagaaaaggaagccgaggccACTGTCCACAGCTGGAGGCACAATCAGGTGAGAATTCTAATTCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 81573 344 + 85365473 CACCCCCCATTCCTC-AGGTG----GGGACAGTCACATGCTTGCAGG-ACGATTTTCGTATTACGGGGCTGAGACCAGTGAGGCAGTGATCTTGGAAGCTGCCGTTAGTCACAATCTGGGCA---AGTTACTACAGTGTGCAG------------------------------------------------------------------------TGTTACCCCTCAGCTCTGGGG----------------------TTCTTTGAGCCCCGCCGGCGTGACCTTGCTGACCCTCTCTGATTGGGGCCAGGCTGTGGGTGTTCCCGGCCATCGGAGCTGC-CGGG-GGACCCTGA----AAAGCAGCTTTTGCAACTGTGTCATCATAGAGAAAAGGAAGCCGAGGCCACTCTCCATAGCTGGGGGCACAGTCAGGTGAGAATTCTAATCCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33920859 344 + 185818997 CATCCCTGATTCCTC-AGGTG----GGGACAGTCACACGCTTGCAGG-AGGATTTTGCAAT---GGGGCTGAGCCCAGTGAGGCAACGACCTTGGAAGCTGCTGTTAGTCACCATCTGGGCAGGCAGCTACTACAACGTACTG------------------------------------------------------------------------TGTTACCCCTCAGCTCTGGGG----------------------TCCTTTGAGCCCCGCAGGTGTGACCTTGCTGACCCTCT----CTGGCCCCAGGCTGTGGGTGTTCCAGGCCATCAGAGCTGC-CGGG-GGACCCTGGAGACAGAGCAGCTTTCCCAGCTGTGTCATCATAGAGACAAGGAAGCCGAGGCCACTGTCCGCAGCTGGGGGCACAGTCAGGTGAGAATTCTAATTCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33536832 344 + 192294377 CATCCCTGATTCCTC-AGGTG----GGGACAGTCACACGCTTGCAGG-AGGATTTTGCAAT---GGGGCTGAGCCCAGTGAGGCAACGACCTTGGAAGCTGCTGTTAGTCACCATCTGGGCAGGCAGCTACTACAATGTACTG------------------------------------------------------------------------TGTTACCCCTCAGCTCTGGGG----------------------TCCTTTGAGCCCCGCAGGCGTGACCTTGCTGACCCTCT----CTGGCCCCAGGCTGTGGGTGTTCCAGGCCGTCAGAGCTGC-CTGG-GGACCCTGGAGACAGAGCAGCTTTCCCATCTGTGTCAGCATAGAGACAAGGAAGCCGAGGCCACTGTCCGCAGCTGGGGGCACAGTCAGTTGAGAATTCTAATTCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4298088 344 - 9440265 CATCCCTGATTCCTC-AGGTG----GGGACAGTCACACGCTTGCAGG-AGGATTTTGCAAT---GGGGCTGAGCCCAGTGAGGCAACGACCTTGGAAGCTGCTGTTAGTCACCATCTGGGCAGGCAGCTACTACAATGTACTG------------------------------------------------------------------------TGTTACCCCTCAGCTCTGGGG----------------------TCCTTTGAGCCCCGCAGGCGTGACCTTGCTGACCCTCT----CTGGCCCCAGGCTGTGGGTGTTCCAGGCCGTCAGAGCTGC-CTGG-GGACCCTGGAGACAGAGCAGCTTTCCCATCTGTGTCAGCATAGAGACAAGGAAGCCGAGGCCACTGTCCGCAGCTGGGGGCACAGTCAGTTGAGAATTCTAATTCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16887654 344 - 21915920 CATCCCTGATTCCTC-AGGTG----GGGACAGTCACATGCTTGCAGG-AGGATTTTGCAAT---GGGGCTGAGCCCAGTGAGGCAATGACCTTGGAAGCTGCTGTTAGTCACCATCTGGGCAGGCAGCTACTACAACGTACTG------------------------------------------------------------------------TGTTACCCCTCAGCTCTGGGG----------------------TCCTTTGAGCCCCGCAGGCGTGACCTTGCTGACCCTCT----CTGGCACCAGGCTGTGGGTGTTCCAGGCCgtcagagctgc-tggg-ggaccctggagacagagcagctttcccagctgtgtcatcatagagacaaggaagccgaggccACTGTCCGCAGCTGGGGGCACAGTCAGGTGAGAATTCTAATTCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 27806 344 - 21531802 CATCCCTGATTCCTC-AGGTG----GGGACAGTCACACGCTTGCAGG-AGGATTTTGCAAT---GGGGCTGAGCCCAGTGAGGCAACGACCTTGGAAGCTGCTGTTAGTCACCATCTGGGCAGGCAGCTACTACAACGTGCTG------------------------------------------------------------------------TGTTACCCCTCAGCTCTGGGG----------------------TCCTTTGAGCCCCGCAGGCGTGACCTTGCTGACCCTCT----CTGGTGCCAGGCTGTGGGTGTTCCCAGCCGTCAGAGCTGC-CGGG-GGACCCTGGAGACAGAGCAGCTTTCCCAGCTGTGTCATCATAGAGACAAGGAAGCCGAGGCCACTGTCCGCAACTGGGGGCACAGTCAGGTGAGAATTCTAATTCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 49423 344 - 2515279 CATCCCTGATTCCTC-AGGTG----GGGACAGTCACACGCTTGCAGG-AGGATTTTGCAAT---GGGGCTGAGCCCAGTGAGGCAATGACCTTGGAAGCTGCTGTTAGTCACCATCTGGGCAGGCAGCTACTACAACGTACTG------------------------------------------------------------------------TGTTACCCCTCAGCTCTGGGG----------------------TCCTTTGAGCCCCGCAGGCGTGACCTTGCTGACCCTCT----CTGGCACCAGGCTGTGGGTGTTCCAGGCCgtcagagctgc-tggg-ggaccctggagacagagcagctttcccagctgtgtcatcatagagacaaggaagccgaggccACTGTCCGCAGCTGGGGGCACAGTCAGGTGAGAATTCTAATTCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 207504 421 + 6586416 CGTCCCTCATTCCTC-A-GTG----GGGACAGTCACACGCTTGCAGG-AGGGTTTTCCTATTACGGGGCTGAGCCCAGTGAGGCAAGGACCTTGGAAGCCGCTGTTAGTCACCATCTGGGCAGGCAGCTACTACAACGTGCTGTGTCACCACCTGGGCAGGCAGCTACTACAACGTGCTGTGTCACCACCTGGGCAGGCAGCTACTACAACGTGCTGTTACCCCTCAGCTCTGGGG----------------------TGCTTTGAG-CCCGCCGGGGTGACCTTGCTGACCCTCTCTGACTGGCGCCAGGCTGTGGGTGTTCCCGGCCGTCAGAGCTGC-CGGG-GGACCCTGGAGAGAGAGCAGCTTTCCCAGCTGTGTCATCAGAGAGACAAGGAAGCCGAGGCCACTATCCGCAGCTGGGGGCACAGTCAGGCGAGAATTCTAATTCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146574492 333 - 204313951 CATCCCCCATTTCTC-GGGGGGGCAGAGACTGTCACATGCTTACAGG-AGGATTTTCCTACGATGGGGCTGAGCCCAGTGAGGTGATGATCATGGCAGCCACTATTAGTCACCATCTGGGAAGGTAGCCATTACAATGTGCAG------------------------------------------------------------------------CATT----CTCAGCGCTGGGG----------------------TCCTTTGA---------------CCTTGCTTACCCTCTCTGATTGGAGTCAGGCTGGGGGTGTTCCTGGCCAtcagagctgc-cgggtggaccctga----agagcagcttgcccaattgtgtcattgtagagactaggaagccgagaccACTGTCTGCAGCCAGGGGCACAGTCAGGTGAGAATTCTAAGTCCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 411700 327 - 2125214 CATCCC---TTCCTC-GGGTGG---GGGACAGTCACATGCTTGCAGG-AGGATTTTCCTATGATGGGGCTGAGCCCAGTGAGGCGGTGATCACGGAAGCCACCGTTAGTCACCATCTGGGCAGGTGGCCATTACAATGTGCAA------------------------------------------------------------------------CATT----CTCAGCTCTGGGG----------------------TCCTTTGA---------------ACTTGCTGATCCTCTCTGACTGGGGCCAGGCTGGGGGTGTTCCTGGCCAtcagagctgc-cggggggaccctga----agagcagcttgcccaactgtgtcatcgtagagactaggaagctgaggccACTGTCCGCAGCCGGGGGCACAGTCAGGTGAGAATTCTAAGTCCT i cebCap1.NW_016107703v1 C 0 I 36 s aotNan1.NW_018514293v1 34712 329 + 376347 CATCCCCCGTTCCTC-GGGTGG---GGGACAGTCATGTGCTTGCAGG-AGGGTTTTCCTATCATGGGGCTGAGCCCAGTGAGGCGATGATCACGGAAGCCACCGTTAGTCACCATCTGGGCAGGTGGCCATTGCAATATGCAG------------------------------------------------------------------------CGTT----CTCAGCTCTGGGG----------------------TCCTTTGA---------------CGTTGCTGACCCTGTCTGACTGGGGCCAGGCTGGGGGTGTTCGTCGCCACcagagctgc-tgaggggaccc-ga----agagcagcttgcccaactgtgtcatcgtagagactaggaagccgaggccACTGTGCACAGCCGGGGGCACTGTCAGGTAAGAATTCTAATTCCT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2153498 324 - 8137123 CATCCCC-AGTCCTC-AGGTGG---GGGCCTGTCCCATGCTTGCAGGTAAGGTCAT--------GGGGTGGAGCCCAGGGAGGCAAC-ATAAAGAAAGCCCTAGTTAACCTACATCCTGGTAGGTGGCCGCTAAACCATGGAG------------------------------------------------------------------------CATCACCATTCAGCTCGGGGGGCCTGGGTCTTGGTACTGCAGAGCCTCAGAGACCCGCTGACATGCCTGCATTGAGTGCATCGATCAGGA--TGGACTGGGGGTGATTTATG---TGGGAACTGCTCTGG-GGACTCTAG----------------------------------AGATGGGGAGACTGAGGTCGCTGTCCACAGCTGATGGGAC---CAGGTGAGAATTCTTGTGCCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I a score=904903.000000 s hg38.chr7_KI270899v1_alt 58281 131 + 190869 TGAGCCTTTCCCCACACTCTGG-CCTGAACCAACCCTGCTGACTCGCTGGTGAAGTCCCCCCACCCTGACCGCCTCAGTTTCTCTCCCTGCTGTGCTGGTG---CCCTGAGACGGGTCGCTGCTGCATTGAGT-AT------ s panTro5.chr7_NW_015973523v1_random 9358 132 - 29993 TGAGCCTTTCCCCACACTCTGG-CCTGAACCAACCCTGCTGACTCGCTGGTGAGGTCCCCCCACCCTGACCACCTCAGTTTCTCTCCCTGCTGTGCTGGTG---CCCTGAGACAGGTCGCTGCTGCATTGAGTCAT------ i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 348 132 + 9642 TGAGCCTTTCCCCACACTCTGG-CCTGAACCAACCCTGCTGACTCGCTGGTGAGGTCCCCCCACCCTGACCACCTCAGTTTCTCTCCCTGCTGTGCTGGTG---CCCTGAGACAGGTCGCTGCTGCATTGAGTCAT------ i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 19192 132 - 432965 TGAGCCTTTCCCCACACTCTGG-TCTGAACCAACCCTGCTGACTCACTGGTGAAGTCCCCCCACCCTGACCACCTCAGTTTCTCTCCCCGCTGTGCTGGTG---CCCTGAGACAGGTCGCTGCTGCATTGAGTCAT------ i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 81917 133 + 85365473 TGAGCCTTTCCCCGCACTCTGGTCCTGAGCCAACGCTGCTGACTCACTGGTGAGGTCCCCCCACCCTGACCACTTCAGTTTCTCTCCCTGCTGTGCTGGTG---CCCTGAGACAGGTCGCTGCTGCATCGAGTCAC------ i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33921203 124 + 185818997 TGAGCTTTTCCCCGCACTCTGGTCCTGAGCCAACCCTGCTGACTTGCTGGTGAGGTCCCCCCACCCCAACCACCTCAGTTTTTCTCCC---------GGTG---CCCTGAGACCAGTCGCTGCTGCAGTGAGTCAT------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33537176 124 + 192294377 TGAGCTTTTCCCCGCACTCTGGTCCTGAGCCAACCCTGCTGACTTGCTGGTGAGGTCCCCCCACCCCGACCACCTCAGTTTTTCTCCC---------GGTG---CCCTGAGACCAGTCGCTGCTGCAGTGAGTCAT------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4298432 124 - 9440265 TGAGCTTTTCCCCGCACTCTGGTCCTGAGCCAACCCTGCTGACTTGCTGGTGAGGTCCCCCCACCCCGACCACCTCAGTTTTTCTCCC---------GGTG---CCCTGAGACCAGTCGCTGCTGCAGTGAGTCAT------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16887998 133 - 21915920 TGAGCTTTTCCCCGCACTCTGGTCCTGAGACAACCCTGCTGACTTGCTGGTGAGGTCCCCCCACCCCGACCACCTCAGTTTTTCTCCCGGCTGTGCTGGTG---CCCTGAGACCAGTCGCTGCTGCAGTGAGTCAT------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 28150 133 - 21531802 TGAGCTTTTGCCCGCACTCTGGTCCTAAGCCAACCCTGCTGACTTGCTGTTGAGGTCCCCCCACCCCGACCACCTCAGTTTTTCTCCCGGCTGTGCTGGTG---CCTTGAGACCAGTCGCTGCTGCAGTGAGTCAT------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 49767 133 - 2515279 TGAGCTTTTCCCCGCACTCTGGTCCTGAGACAACCCTGCTGACTTGCTGGTGAGGTCCCCCCACCCCGACCACCTCAGTTTTTCTCCCGGCTGTGCTGGTG---CCCTGAGACCAGTCGCTGCTGCAGTGAGTCAT------ i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 207925 132 + 6586416 TGAGCTTTTCCCTGCACTCTGGTCCTGAGCCAACCCTGCTGACTCGCTGGTGAGGT-CCCCCACCCCGACCACCTCAGTTTCTCTCCCGGCTGTGCTGGTG---CCCTGAGACCAGTCGCTGCTGCAGTGAGTCAT------ i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146574825 134 - 204313951 CCAGCCTTTCCCCGCTCTCTGGTCCT-AGCCAACTCTGCTGACTCACTGGTGAGGTCCCACCACCCCTGCCACCTCAATTTCTCTCCCTGCTATGCTGGGAGAGACCTGAAACCGGTCGGGGCTGCACTGAGTCA------- i calJac3.chr2 C 0 I 1 s aotNan1.NW_018514293v1 35041 131 + 376347 CCAGCCTTTCCCCACACTCTGGTCCT-AGCCAACCCTGCTGACTCACTGGTGAGGTCCCCCCACCCCTGCCACCTCAGTTTCTCTCCCTGCTATGCTGGGA---CCCTGAGGCTGGTCAGGGCTGCACTGAGCCA------- i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 2153822 121 - 8137123 GGAGCCTTTGCCACAGTTCTGATTCC-----------ACTGACAC-CTGGTGGGGATCACCCCTCATATCCT-----GTTTCTCTCGCAGCTGTGTTGGCG---TCCTGAG-CCAGTCACTGCTTCATTATTTAATGAATCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e cebCap1.NW_016107703v1 412027 36 - 2125214 I a score=3804290.000000 s hg38.chr7_KI270899v1_alt 58412 468 + 190869 AAGTGCTTCTGAGCACAGAGAGGACTTCCAAGCACTGTGCAGA-ATCACCAGCAACTTTCAGAAAACAGACAAATTGCTGGGGAAGCAGCATCATTCATGCCCTCTGGTTGAG------------GGAGGCTAGG---------GGCCATCCAGGGGTCTGG-----GGAGACTC--GGGGATCC--AG-GCCCAGACAGAGCCTGTTCCCAGACAAAAACCA-TGGGTGGCA-CCCTTCACTCTCTCTTCCCATGGAAACTGCATCC-AAAGCAAGAAACTTCCATTTGAGACCACACTGAACAAGAAAGGGCCATTACATTTTATTCTGAAATGGCCCCTGGAGAAAGAAT--GGAAGCAAATTGCACAAGTGGGCGTCCATCTCCTT-CCACCCGGCCACGGTCACCGTGGTGCTCGGCCAGGCTCCTGGTGACGTGAGGCAAATCTCTCCGCTGGC-AAACCAGCCCACACACTCCCTCCATTGCAG-----ACGGTCACCCAGAGCT s panTro5.chr7_NW_015973523v1_random 9490 468 - 29993 AAGTGCTTCTGAGCACAGAGAGGACTTCCAAGCACTGTGCGGA-ATCACCAGCAACTTTCAGAAAACAGACAAATTGCTGGGGAAGCAGCATCATTCATGCCCTCTGGTTGAG------------GGAGGCTAGG---------GGCCATCCAGGGGTCTGG-----GGAGACTC--GGGGATCC--AG-GCCCAGACAGAGCCTGTTCCCAGACAAGAACCA-TGGGTGGCA-CCCTTCACTCTCTCTTCCCATGGAAACTGCATCC-AAAGCAAGAAACTTCCATTTGAGACCACACTGAACAAGAAAGGGCCATTACATTTTATTCTGAAATGGCCCCTGGAGAAAGAAT--GGAAGCAAATTGCACAAGTGGGCATCCATCTCCTT-CCACCCGGCCACGGTCACCGTGGTGCTCGGCCAGGCTCCTGGTGACGTGAGGCAAGTCTCTCCATTGGC-AAACCAGCCCACACACTCCCTCCATTGCAG-----ACTGTCACCCAGAGCT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 480 468 + 9642 AAGTGCTTCTGAGCACAGAGAGGACTTCCAAGCACTGTGCAGA-ATCACCAGCAACTTTCAGAAAACAGATAAATTGCTGGGGAAGCAGCATCATTCATGCCCTCTGGTTGAG------------GGAGGCTAGG---------GGCCATCCAGGGGTCTGG-----GGAGACTC--GGGGATCC--AG-GCCCAGACAGAGCCTGTTCCCAGACAAGAACCA-TGGGTGGCA-CCCTTCACTCTCTCTTCCCATGGAAACTGCATCC-AAAGCAAGAAACTTCCATTTGATACCACACTGAACAAGAAAGGGCCATTACATTTTATTCTGAAATGGCCCCTGGAGAAAGAAT--GGAAGCAAATTGCCCAAGTGGGCGTCCATCTCCTT-CCACCCGGCCACGGTCACCGTGGTGCTCGGCCAGGCTCCTGGTGACGTGAGGCAAATCTCTCCATTGGC-AAACCAGCCCACACACTCCCTCCATTGCAG-----ACGGTCACCCAGAGCT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 19324 467 - 432965 AAGTGCTTCTGAGCACAGAGAGGACTTCCAAGCACTGTGCAGA-ATCACCAGCAACTTTCAGAAAACAGACAAATTGCTGGGGAAGCAGCATCATTCATGCCCTCTGGTTGAG------------GGAGGCTAGG---------GGCCATCCAGGGGTCTGG-----GGAGACTC---GGGATCC--AG-GCCCAGACAGAGCCTGTTCCCAGACAAGAACCA-TGGGTGGCA-CCCTTCACTCTCTCTTTCCATGGAAACTGCATCC-AAAGCAAGAAACTTCCATTTGAGACCACACTGAACAAGAAAGGGCCATTACATTTTATTCTGAAATGGCCCCTGGAGAAAGAAT--GGAAGCAAATTGCACAAGTGGGTGTCCATCTCCTT-CCACCCGGCCACGGTCACCGTGGTGCTCGGCCAGGCTCCTGGTGACGTGAGGCAAATCTCTCCATTGGC-AAACCAGCCCACACACTCCCTCCATTGCAG-----ACGGTCACCCAGAGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 82050 397 + 85365473 AAGTGCTTCTGAGCACAGAGAGGACTTCCAAGCACTG--------------------------------------------------------------------TGGTTGAG------------GGAGGCCAGG---------GGCCATCCAAGGGGCTGG-----GGAGACTC--CGGGATCC--AG-GCCCAGACAGAGCCTGTTCCCAGACAAGAACCA-TGGGTGGCG-CCCTTCACTCTC---CTCCATGGAAACTGCATCC-AAAGCAAGAAACTTCCGTTTGAGACCACACTGAACAAGCAAGGGCCATTACATTTTATTCTGAAATGGCCCCTGGAGAAAGAAG--GGAAGCAAATTGCACAAGTGGGCGTCCATCTCCTT-CTACCCGGCCACGGTCACTGTGGTGCTTGGCCAGGCTCCCGGTGACGTGAGGCAAATGTCT--GTTGGCAAAACCAGCCCACACACTCTGTCCATTGCAG-----ACGGTCACCCAGAGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33921327 466 + 185818997 AAGTGCCTCTGAGCACAGAGAGGACTTCCAAGCACAGTGAAGG-GTCACCAGCAACTTTCAGGAAACAGAAAAATTGCTGGGGAATCAGTACCATTCATGCCCTGTGGTTGAGAG----------GGAGGCTAGG---------GGCCACCCAAGGGACTGG-----GGAGACTT-GGGGGGTCC--AG-GCCCAGACAGAGCCTGTTCCCAGCCAAGAACCA-GGGGTGGCA-CCCTT--CTCCCCCCTCCCATGGAAACTGCATCC-AAAGCAAGAAAC-TCCATCTGAGACCACACTGAACAAGAAAGGGCCGTTACATTCTATTTCGAAATAGCCCCTGGAGAAAGAAG--GGAAGTAAATTGCACAAGTGGGCGTCCATTTCCTT-CTACGCGGCCATGGTCACTGTGGTGCTCAGCCAGGCTCCTGGTGACGTGAGGCACATCTCTCAGTTGGC-AAAGCAGCCCACACACTCCCTCCATTGC-------ACAGTCACCCAGGGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33537300 466 + 192294377 AAGTGCCTCTGAGCACAGAGAGGACTTCCAAGCACAGTGAAGG-GTCACCAGCAACTTTCAGGAAACAGAAAAATTGCTGGGGAATCAGTACCATTCATGCCCTGTGGTTGAGAG----------GGAGGCTAGG---------GGCCACCCAAGGGACTGG-----GGAGACTT-GGGGGGTCC--AG-GCCCAGACAGAGCCTGTTCCCAGCCAAGAACCA-GGGGTGGCA-CCCTT--CTCCCCCCTCCCATGGAAACTGCATCC-AAAGCAAGAAAC-TCCATCTGAGACCACACTGAACAAGAAAGGGCCGTTACATTCTATTTCGAAATAGCCCCTGGAGAAAGAAG--GGAAGTAAATTGCACAAGTGGGCGTCCATTTCCTT-CTACGCGGCCATGGTCACTGTGGTGCTCAGCCAGGCTCCTGGTGACGTGAGGCACATCTCTCAGTTGGC-AAAGCAGCCCACACACTCCCTCCATTGC-------ACAGTCACCCAGGGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4298556 466 - 9440265 AAGTGCCTCTGAGCACAGAGAGGACTTCCAAGCACAGTGAAGG-GTCACCAGCAACTTTCAGGAAACAGAAAAATTGCTGGGGAATCAGTACCATTCATGCCCTGTGGTTGAGAG----------GGAGGCTAGG---------GGCCACCCAAGGGACTGG-----GGAGACTT-GGGGGGTCC--AG-GCCCAGACAGAGCCTGTTCCCAGCCAAGAACCG-GGGGTGGCA-CCCTT--CTCCCCCCTCCCATGGAAACTGCATCC-AAAGCAAGAAAC-TCCATCTGAGACCACACTGAACAAGAAAGGGCCGTTACATTCTATTTCGAAATAGCCCCTGGAGAAAGAAG--GAAAGTAAATTGCACAAGTGGGCGTCCATTTCCTT-CTACGCGGCCATGGTCACTGTGGTGCTCAGCCAGGCTCCTGGTGACGTGAGGCACATCTCTCAGTTGGC-AAAGCAGCCCACACACTCCCTCCACTGC-------ACAGTCACCCAGGGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16888131 466 - 21915920 AAGTGCCTCTGAGCACAAAGTGGACTTCCAAGCACAGTGAAGG-GTCACCAGCAACTTTCAGGAAACAGAAAAATTGCTGGGGAATCAGTACCATTCATGCCCTGTGGTTGAGAA----------GGAGGCTAGG---------GGCCACCCAAGGGACTGG-----GGAGACTT-GGGGGGTCC--AG-GCCCAGACAGAGCCTGTTCCCAGCCAAGAACCA-GGGGTGGCA-CCCTT--CTCCCCCCTCCCATGGAAACTGCATCC-AAAGCAAGAAAC-TCCATCTGAGACCACACTGAACAAGAAAGGGCCGTTACATTCTATTTCGAAATAGCCCCTGGAGAAAGAAG--GGAAGTAAATTGCACAAGTGGGCGTCCATTTCCTT-CTACGCGGCCATGGTCACTGTGGTGTTCAGCCAGGCTCCTGGTGATGTGAGGCACATCTCTCAGTTGGC-AAAGCAGCCCACACACTCCCTCCATTGC-------ACAGTCACCCAGGGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 28283 466 - 21531802 AAGTGCCTCTGAGCACAGAGAGGACTTCCAAGCACAGTGAAGG-GTCACCAGCAACTTTCAAGAAACAGAAAAATTGCTGGGGAATCAGTACCATTCATACCCTGTGGTTGAGAG----------GGAGGGTAGG---------GGCCACCCAAGGGACTGG-----GGAGACTT-GGGGGGTCC--AG-GCCCAGACAGAGCCTGTTCCCAGCCAAGAACCA-GGGGTGGCA-CCCTT--CTCCCCCCTCCCATGGAAACTGCATCC-AAAGCAAGAAAC-TCCATCTGAGACCACACTGAACAAGAAAGGGCCGTTACATTCTATTTCGAAATGGCCCCTGGAGAAAGAAG--GGAAGTAAATTGCACAAGTGGGCGTCCATTTCCTT-CTACCCGGCCATGGTCACTGTGGTGCTCAGCCAGGCTCCTGGTGACGTGACGCACATCTCTCAGTTGGC-AAAGCAGCCCACACACTCCCTCCATTGC-------ACAGTCACCCAGGACT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 49900 466 - 2515279 AAGTGCCTCTGAGCACAGAGAGGACTTCCAAGCACAGTGAAGG-GTCACCAGCAACTTTCAGGAAACAGAAAAATTGCTGGGGAATCAGTACCATTCATGCCCTGTGGTTGGGAG----------GGAGGCTAGG---------GGCCACCCAAGGGACTGG-----GGAGACTT-GGGGGGTCC--AG-GCCCAGACAGAGCCTGTTCCCAGCCAAGAACCA-GGGACGGCA-CCCTT--CTCCCCCCTCCCATGGAAACTGCATCC-AAAGCAAGAAAC-TCCATCTGAGACCACACTGAACAAGAAAGGGCCATTACATTCTATTTCGAAATAGCCCGTGGAGAAAGAAG--GGAAGTAAATTGCACAAGTGGGCGTCCATTTCCTT-CTACGCGGCCATGGTCACTGTGGTGCTCAGCCAGGCTCCTGGTGACGTGAGGCACATCTCTCAGTTGGC-AAAGCAGCCCACACACTCCCTCCATTGC-------ACAGTCACCCAGGGCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 208057 465 + 6586416 AAGTGCTTCTGAGAATAGAGAGGACTTCCAAGCACGGTGAAGG-GTCACCAGCAACTTTCAGGAAACAGACAAATTGCTGGGGAATCAGTAGCATTTGTGCCCTGTGATTGAGAG----------GGAGGCCAGG---------GGCCATCCAAGGGGCTGG-----GGAGACCC-AGGGGGTCC--AG-GCCCAGACAGAGCCTGTTCCCAGCCAAGAACCA-GGGGTGGCA-CCCTT--CT-CCGCCTCCCATGGAAACTGCATCC-AAAGCAAGAAAC-TCCATCTGAGACCACACTGAGCAAGAAAGGGCCGTTGCATTCTATTTCGAAATGGCCCCTGGAGAAAGAAG--GGAAGCAAATTGCACAAGTGGGCATCCATTTCCTT-CTACCCGGCCGTGGTCACTGTGGTGCTTGGCCAGGCTCCTGGTGACATGAGGCACATCTCTCGGTTGGC-AAAGCAGCCCACACACTCCCTCCACTGC-------ACAGTCACCCAGGGCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146574960 470 - 204313951 AAGCACTTCTGAGCACAGAGAGGACTTCCAAACACTGTGGAGA-ATCACCAGCAACTCTCAGAAAACAGACAAATTGCTGGGGAAGCAGCTTCATTCATGCCCT-TGGTTGAGAG----------GGAGACCAGG---------AGCCATCCAAGGGGCTGGCTGG-GGGGAACC-GGGGGATCCAGAG-GTCCAGACAGAGTCTGTTCCCAGACAAGAACCA-TGGGCAGCA-CCCTTCACTCTCCCCTCTCATGGAAACCTCATCC-AAAGCAAG-AAAGCCTATTTGAGACCACACTGAACACGAAATGGCCATTCCC-----TTTTGAAATGGCCCCTAGAGAAAGAAG--TGAAGCAAATTGCACAAGTGGGCATCCATTTCCTT-CTATCCGGCCATGGTCACCTTGGTGTCCAGCCAGGCTGCTGGTGACATGAGGCAAATCTCTCTGTTTGC-AAATCAGCCCCCATACTCGCTCCATTACAG-----ATAGTCACCCAGGGCT i calJac3.chr2 I 1 C 0 s cebCap1.NW_016107703v1 412063 477 - 2125214 AAGCGCTTCTGAGCACAGAGAGGACTTCCAAACACTGTGGAGA-ATCACCAGCAACTTTCAGAAAACAGACAAACAGCTGGGGAAGCAGCTTCATTCATGCCCTCTGGTTGAGAG----------GGAGACCAGG---------AGCCATCCAAGGGGCTGGCAGGAGGGGACCC-GGGGGACCCAGAG-GTCCAGACAGAGTCTGTTCCCAGACAAGAACCA-TGGGCAGCA-CCCTTCACTCTCCCCTCTCATGGAAGCCTCATCC-AAAGCAAGAAAAGTCTATTTGAGACCACACTGAACAAGAAAGGGCCATTCCCTTTTATTTTGAAATGGCCCCTAGAGAAAGAAG--TGAAGCAAATTGCACAAGTGGGCATCCATTTCCAT-CCATCTGGCCATGGTCACCTTGGTGTCCGGCCAGGCTACTGGTGACGTGAGGCAAATCTCTCTG-AGGC-AAATCAGCCCACGCACTCCCTCCATTGCAG-----ACAGTCACCCAGGGCT i cebCap1.NW_016107703v1 I 36 C 0 s aotNan1.NW_018514293v1 35173 454 + 376347 AAGCGCGTCTGAACACAGAGAGGACTTCCAAACACTGTGGAGA-ATCCCCAGCAACTTTCAGAAAACAGACAAATTGCTGGGGAAGCAGCTTCATTCATGCCCTCTGGTTGAGAG----------GGAGACCAGG---------AGCCATCCAAGGGGCTGGCGGG-GGGGACCC-GGGGGATCCAGAG-GTCCAGACAGAGTCTGTTCCCAGACAAGAGCCA-TGGGCGGCA-CCCTTCACTCTCCCCTCTCATGGAAACCTCATCC-AAAGCAAGAAAAGTCTATTTGAGACCACACTGAACAAGAAAGGGCCATTCCCTTTTATTTTGAAATGGCCCCTAGAGAAAGAAA--TGAAGCAAATTGCACAAGTGGGCATCCATTTCCTC-CTATCCAGCCATGGTCACCTTGGTGTCCGGCCAGGCTGCTGGCGACCT------------------------ATCAGCCCACGCACTCCCTCCATTGCAG-----ACAGTCACCCGGGGCT i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2153943 458 - 8137123 --CAATTTCTAAGCACAGAGAGGACTTCCGTGCATGGTGGGGGAATCGTCAGCATCTTTC--------TAAAAGATGCT------------CCATTAGTGCCCTCTGGCTGCTGGGGGCAGTGTTGGTGGTCAGACGATGAGACAGCCTTCCAAGGGTCTGCT----GGTGACCCCAGGAGATCC--AGCAGCCAGACAGAACCTACTCCCAGCCAAGGACCATTGGGCTGCAGCCCTTCACGCCCCCCTCCTGGACAAATTGCATCTAAAAGCAAGAGACATCAATTTGAGACCACAGCAAATGAGAAAATACCATTCCATTTCATTCTGAAGT-GCCCCTAGAGAAAGGAGGTGGAAGTAAATGGCCCAAGTGGAAGTCTACTTCCTTGTTACCCA------GTCATTGTGGTGCATAGCCCTGCACCT-GTGCCCTGAGGC-----------------AAACCAGCCCACACTGCCCTCTTGCTGCAGCAGGCACA-TCACCCCACCCT i otoGar3.GL873611 C 0 I 16 e canFam3.chr6 60970986 5164 - 77573801 I a score=214365.000000 s hg38.chr7_KI270899v1_alt 58880 26 + 190869 GGGAGAAGCACCAGGGCCCTGAGCCC s panTro5.chr7_NW_015973523v1_random 9958 26 - 29993 GGGAGAAGCACCAGGGCCCTGAGCCC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 948 26 + 9642 GGGAGAAGCACCAGGGCCCTGAGCCC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 19791 26 - 432965 GGGAGAAGCACCAGGGCCCTGAGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 82447 26 + 85365473 GGGAGGGGCACTAGGGTCCTGAGCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33921793 26 + 185818997 GGGAGGAGCACTAGGCCCCTGAGCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33537766 26 + 192294377 GGGAGGAGCACTAGGCCCCTGAGCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4299022 26 - 9440265 GGGAGGAGCACTAGGCCCCTGAGCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16888597 26 - 21915920 GGGAGGAGCACTAGGCCCCTGAGCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 28749 26 - 21531802 GGGAGGAGCACTAGGCCCCTGAGCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 50366 26 - 2515279 GGGAGGAGCACTAGGCCCCTGAGCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 208522 26 + 6586416 GGGAGGAGCACTAGGCCCCTGAGCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146575430 26 - 204313951 GGGGGAAGCACCAGGGACCTGAGCCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 412540 26 - 2125214 GCAAGGAACACCAGGGACCTGAGCTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 35627 26 + 376347 GGGGGGAGCACCAGGGACCTGAGCCT i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2154401 16 - 8137123 I e canFam3.chr6 60970986 5164 - 77573801 I a score=3210409.000000 s hg38.chr7_KI270899v1_alt 58906 404 + 190869 GGCCTCTACAGGCACAATGAGTATCATTTTACATCTCTGACCACGT--CTTATCTTCTCTCCAAGATGCGCTCTAAC-----------ACTTGGTCAAATTAACAGTAAACAGCGTCTTCCAAGCTGAAAACAAATGCATCTCACTTGACATTCCGCATCAGCACCATCCCTCACCTCAGCTGTGTGGGGACTGGACTCTTCAGACAGCAGTGCTGCTCAG---AAGAGAGCGAA-GGCAGTGGCCAGCCCCTCTCCTGCCTGTGCACTCGGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAAGGCGCCTTCCTCTGCTCTGAC----CACGGTGGAGCGCGGGATCTCCTGGGATGGGCATTTCTCTTTTCCTGGGAGGT----CATGGGGCATGAGCTGCACTGAGCAGCGGAGGGCCGGTG s panTro5.chr7_NW_015973523v1_random 9984 404 - 29993 GGCCTCTACAGGCACAATGAGTATCATTTTATATCTCTGACCACGT--CTTATCTTCTCTCCAAGATGCGCTCTAAC-----------ACTTGGTCAAATTAACAGTAAACAGCGTCTTCCAAGCTGAAAACAAATGCATCTCACTTGACATTCCGCATCAGCACCATCCCTCACCTCAGCTGTGTGGGGGCTGGACTCTTCAGACAGCAGTGCTGCTCAG---AAGAGAGCGAA-GGCAGCGGCCAGCCCCTCTCCTGCCTGTGCACTCGGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAAGGCGCCTTCCTCTGCTCTGAC----CACGGTGGAGCGCGGGATCTCCTGGGATGGGCATTTCTCTTTTCCTGGGAGGT----CATGGGGCATGAGCTGCACTGAGCAGCAGAGGGCCGGTG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 974 404 + 9642 GGCCTCTACAGGCACAATGAGTATCATTTTACATCTCTGACCACGT--CTTATCTTCTCTCCAAGATGCGCTCTAAC-----------ACTTGGTCAAATTAACAGTAAACAGCGTCTTCCAAGCTGAAAACAAATGCATCTCACTTGACATTCCGCATCAGCACCATCCCTCACCTCAGCTGTGTGGGGGCTGGACTCTTCAGACAGCAGTGCTGCTCAG---AAGACAGTGAA-GGCAGCGGCCAGCCCCTCTCCTGCCTGTGCACTCGGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAAGGCGCCTTCCTCTGCTCTGAC----CACAGTGGAGCGCGGGATCTCCTGGGATGGGCATTTCTCTTTTCCTGGGAGGT----CATGGGGCATGAGCTGCACTGAGCAGCGGAGGGCTGGTG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 19817 393 - 432965 GGCCTCTACAGGCACAATGAGTATCATTTTACATCTCTGACCACGT--CTTATCTTCTCTCCAAGATGCGCTCTAAC-----------ACTTGGTCAAATTAGCAGTAAACAGCGTCTTCCAAGCTGAAAACAAATGCATCTCACTTGACATTCCGCATCAGCACCATCCCTCACCTCAG-----------CTGGACTCTTCAGACAGCAGTGCTGCTCAG---AAGAGAGCGAA-GGCAGTGGCCAGCCCCTCTCCTGCCTGTGCACTCGGGGAATCTGCCGGTCGTGAA------CTGGCCTGGCCACAGAAGGCGCCTTCCTCTGCTCTGAC----CACGGTGGAGCGCGGGATCTCCTGGGATGGGCATTTCTCTTTTCCTGGGAGGT----CATGGGGCATGAGCTGCACTGAGCAGCAGAGGGCCGGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 82473 403 + 85365473 GGCTTCTACAGGCACAATGAGTGTCATTTAACATCTCTGACCACGT--CTCATCTTTTCTCCAAGATGCTCTCTAAT-----------GCTGGGTCAAATTAACAGTAAACAGCGTCTTCCAAGCTGAAAACAAGTGCATCTCACTTGACATTCCACATCAGCACCATCCCTCACCTCAGCTGTGTGGAGGCTGCACTCTTGAGACAGCAGTGCCGCTCAG---GAGAGAGCGAA-GGCAGCGGCCAG-CCCTCTCCTGCCTGTGCACTCGGGGAATCTGCCAGTTGTGAC------CTGGCCTGGCTGCAGAAGGCGCCTTGCTCTGCTCTGAC----CATGGTGGAGCGCGGGGTCTCCTGGGATGGGCATTTCTTGTTTCCTGGGAGGT----CAGGGGGCATGAGCCGCACTGAGCAGTGGAGGGCCTGTG i nomLeu3.chr20 C 0 I 1109 s rheMac8.chr3 33921819 412 + 185818997 AGCCTCTCCAGGCACAGTGAGAATCATTTAACATCTCTGACCACGT--CTCGTCTTCTCTCCAAGAGGCACTCTAACAGCAGCACATGACCTGGTCAGATTCACAGTAAACAGTGTCTTCCGAGCTGAAAACAAACAAACCTCACTTGACATTCCACATCAGGACCATCCCTCGCCTCAGCTGGGTGGAGGCTGGACGC--CAGACAGCCGTGCCGCTCTG----AGGCAGCGAA-GGCAGTGGCCAGCCCCTCTCCTGCCTGTGCACTCAGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAGGATGCCTTCCTCGGCTCTGAC----CATGGTGGAATGCATGATCTCCTGGGATGGGTATTTCTCATGCCCTGGGAGGT----CATGGGGCATGAGCTGCACTAAGCAGCGGAGGGCCAGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33537792 412 + 192294377 AGCCTCTCCAGGCACAGTGAGAATCATTTAACATCTCTGACCACGT--CTCGTCTTCTCTCCAAGAGGCACTCTAACAGCAGCACATGACCTGGTCAGATTCACAGTAAACAGTGTCTTCCGAGCTGAAAACAAACAAATCTCACTTGACATTCCACATCAGGACCATCCCTCGCCTCAGCTGGGTGGAGGCTGGACGC--CAGACAGCCGTGCCGCTCTG----AGGCAGCGAA-GGCAGTGGCCAGCCCCTCTCCTGCCTGTGCACTCAGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAGGATGCCTTCCTCGGCTCTGAC----CATGGTGGAATGCATGATCTCCTGGGATGGGTATTTCTCATGCCCTGGGAGGT----CATGGGGCATGAGCTGCACTAAGCAGCGGAGGGCCAGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4299048 412 - 9440265 AGCCTCTCCAGGCACAGTGAGAATCATTTAACATCTCTGACCACGT--CTCGTCTTCTCTCCAAGTGGCACTCTAACAGCAGCACATGACCTGGTCAGATTCACAGTAAACAGTGTCTTCCGAGCTGAAAACAAACAAATCTCACTTGACATTCCACATCAGGACCATCCCTCGCCTCAGCTGGGTGGAGGCTGGACGC--CAGACAGCCGTGCCGCTCTG----AGGCAGCAAA-GGCAGTGGCCAGCCCCTCTCCTGCCTGTGCACTCAGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAAGATGCCTTCCTCGGCTCTGAC----CATGGTGGAATGCATGATCTCCTGGGATGGGTATTTCTCATGCCCTGGGAGGT----CATGGGGCGTGAGCTGCACTAAGCAGCGGAGGGCCAGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16888623 412 - 21915920 AGCCTCTCCAGGCACAGTGAGAATCATTTAACATCTCTGACCACGT--CTCGTCTTCTCTCCAAGATGCACTCTAACAGCAGCACATGACCTGGTCAGATTCACAGTAAACAGTGTCTTCCGAGCTGAAAACAAACAAATCTCACTTGACATTCCACATCAGGACCATCCCTCGCCTCAGCTGGGTGGAGGCTGGACTC--CAGACAGCCGTGCCGCTCTG----AGGCAGCGAA-GGCAGTGGCCAGCCCCTCTCCTGCCTGTGCACTCAGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAGGATGCCTTCCTCGGCTCTGAC----CATGGTGGAATGCAGGATCTCCTGGGATGGGTATTTCTCATGTCCTGGTAGGT----CATGGGGCATGAGCTGCACTGAGCATCGGAAGGCCAGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 28775 411 - 21531802 AGCCTCTCCAGGCACAGTGAGAATCATTTAACATCTCTGACCACGT--CTCGTCTTCTCTCCAAGATGCACTCTAACAGCAGCACATGACCTGGTCAGATTCACAGTAAACAGTGTCTTCCAAGCTGAAAACAAACAAATCACACTTGACATTCCACATCAGCACCATCCCTCACCTCAGCTGGGTGGAGGCTGGACTC--CAGACAGCCGTGCCGCTCAG----AGACAGCGAA-GGCAGCGGCCAGCCCCTCTCCTGCCTGTGCACTCAGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAGGATGCCTTCCTCGGCTCTGAC----CATGGTGCAATGCAGGAGCTCCTGGGATAGGTATTT-TCATGTCCTGGGAGGT----CATGGGGCGTGAGCTGCACTGAGCAGCAGAGGGCCAGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 50392 412 - 2515279 AGCCTCTCCAGGCACAGTGAGAATCATTTAACATCTCTGACCACGT--CTCGTCTTCTCTCCAAGATGCACTCTAACAGCAGCACATGACCTGGTCAGATTCACAGTAAATAGTGTCTTCCGAGCTGAAAACAAACAAATCTCACTCGACATTCCACATCAGGACCATCCCTCGCCTCAGCTGGGTGGAGGCTGGACTC--CAGACAGCCGTGCCGCTCTG----AGGCAGCGAA-GGCAGTGGCCAGCCCCTCTCCTGCCTGTGCACTCAGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAGGATGCCTTCCTCGGCTCTGAC----CATGGTGGAATGCAGGATCTCCTGGGATGGGTATTTCTCATGTCCTGGGAGGT----CATGGGGCGTGAGCTGCACTGAGCAGCGGAGGGCCAGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 208548 413 + 6586416 AGCCTCTCCAGGCACAGTGAGAATCATTTAACACCTCTGACCATGT--CTCGTCTTCTCTCCAAGATGCACTCTAACAGCAGCACGTGACCTGGTCAGATTCACAGTAAACAGCGTCTTCCAAGCTGAAAACAAACGAATCTCACTTGACATTCCGCGTCAGCACCATCCCTCACCTCAGCTGGGTAGAGGCTGGATGCTTCAGACAGCCGTGTGGCTCAG----AGACAGCGAA-GGCAGCGGCCAGCCCC-CTCCTGCCTGTGCACTCAGGGAATCTGCCGGTTGTGAA------CTGGCCTGGCCACAGAGGATGCCTCCCTCGGCTCTGAC----CATGGTGGGATGCAGGATCTCCTGGGATGGGTATTTCTCATGTCCTGGGAGGT----CATGGGGCGTGAGCTGCACTGAGCAGCGGAGGTCTGGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146575456 375 - 204313951 GGCCTCTAGAGGCGCAATGAG--------------------TATGT--CTCATCTTCTCTCCAAGATGCACCCTAACACCAGCACACGACCTGGTCAAATCAACAATGAACAGCATCTTCCAAGCTGAAACCAAACATCTCTCACTTGACATTCTGCATCAGCACTGTCCCTCACCTCAGCTGTGTGAAGTCTACACTCTTCAGACAGCAGTGTGACCGAG---AA--------------------AGCCCCTCTCCTGCCTGTCCACTC-AGGAATCTGTCGGTTGTGAA------CTGGCCTAGCCACAGAAGGCGCCTTCCTCTGCTCTGAC----CATGGTGGAGGACGGGATCTCCTGGGATGGGTATTTCCCATTTCCTGGGAGGA----GATGGGGCATGAGCCTCCCTGAGCAGTGGAGGGTCGGTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 412566 375 - 2125214 GGCCTCTAGTGGCACAATGAG--------------------TACGT--CTCA---TCTCTCCAAGATGCACCCTAACACTAGCACACAACCTGGTCAAATCAACAACGAACAGCATCTTCCGAGCTGAAAGCAAACATCCCTCACTTAACATTCTGCATCAGCACCATCCCTCCCCTCAGCTGTGTGAAGTCTACACCCTTCAGACAGCAGTGCGGCTCAG---AAGA-----------------CAGCCCCTCTCCTGCCTGTCCACTC-GGGAATCTGCCAGTTGTGAA------CCGGCCTAGCCACAGAAGGCGCCTTCCTCTGCTCTGGC----CATGGTGGAGGACGGGATATCCTAGGATGGGTATTTCCCATTTCCTGGGAGAA----GATGGGGCATGAGCCTCCCTGAGCAGTGGAGGGCCAGTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 35653 378 + 376347 GGCCTCTAGAGGTGCAACGAG--------------------CACGT--CTCATCTTGTCTCCAAGATGCACCCTAACACCAGCACACGACCTGATCAAATCAACAACGAACGGCATCTTCTGAGCTGAAAGCAAACATCTCTCACTTGACATTCTGCATCAGCACCATCCCTCACCTCAGCTGTGTGAAGTCTACGCTCTTCAGACAGCAGTGCGGCTCAG---AAGA-----------------CAGCCCCTCTCCTGCCTGTCCACTC-GGGAATCTGCCAGTTGTGAG------CTGGCCTAGCCACAGAAGGCGCCTTCCTCTGCTCTGAC----TATGGTGGTGGATGGGATCTCCTGGGATGGGTATTTCCCATTTCCTGGGAGGA----GATGGGGCACGAGCCACCCTGAGTGGTGGAGGGCCGGTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2154417 428 - 8137123 GGTCTCTCCAGGCAGAATGGGTGTAATGTAAAATCTCTTACCACGTAGTTCATCTTCTCTCCAAGGCGCTCTCTAACCTCAATGCACAACCCGGTCAAACTGAGAATAAAGGGTCTCTGC-AAGTTGAAAATAAATTTATGCTGCTTGACA-----CAGTAGCACC-TTCCTCATGGCGGTTTGTGCTGGGATGGAACATTATGACGGTAGTGCAGCCCAGCTCGGTGCGGCCAGCAGCAGTGGCCAGCTCCTTTCCTGTCTGTCCAGTCTGGGAATCTGTGAGTTATGAACAGCGGCTGGCCTGGGCACAGAAGACACCATCCTTGGTACCTCCTCCACATGGTGGGGAGAGTGATCTCCTGGGATGGTCATTTCTCAGTTTCCGGGAGCTGATGGATGGAGCATGAACTTTGCTCAGCTGTGAGGGACTGGTG i otoGar3.GL873611 I 16 C 0 e canFam3.chr6 60970986 5164 - 77573801 I a score=113422.000000 s hg38.chr7_KI270899v1_alt 59310 14 + 190869 -GGCTGAAGCCCTGC----------------- s panTro5.chr7_NW_015973523v1_random 10388 14 - 29993 -GGCTGAAGCCCTGC----------------- i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1378 14 + 9642 -GGCTGAAGCCCTGC----------------- i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 20210 14 - 432965 -GGCTGAAGCCCTGC----------------- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33922231 14 + 185818997 -GGTTGAAGCCCTGC----------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33538204 14 + 192294377 -GGTTGAAGCCCTGC----------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4299460 14 - 9440265 -GGTTGAAGCCCTGC----------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16889035 14 - 21915920 -GGTTGAAGCCCTGC----------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 29186 14 - 21531802 -GGTTGAAGCCCTGC----------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 50804 14 - 2515279 -GGTTGAAGCCCTGC----------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 208961 14 + 6586416 -GGTTGAAGCCCTGC----------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146575831 14 - 204313951 -GGTTGAGGCCCTGC----------------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 412941 14 - 2125214 -GGTTGAGGCCCTGC----------------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 36031 14 + 376347 -GGTTGAGGCCCTGC----------------- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2154845 32 - 8137123 GGGACAAAGCCCTGCAATAAACAAAGCCCTGC i otoGar3.GL873611 C 0 I 1066 e canFam3.chr6 60970986 5164 - 77573801 I e nomLeu3.chr20 82876 1109 + 85365473 I a score=359900.000000 s hg38.chr7_KI270899v1_alt 59324 41 + 190869 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC s panTro5.chr7_NW_015973523v1_random 10402 41 - 29993 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1392 41 + 9642 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 20224 41 - 432965 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33922245 41 + 185818997 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33538218 41 + 192294377 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4299474 41 - 9440265 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16889049 41 - 21915920 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 29200 41 - 21531802 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 50818 41 - 2515279 TCTTGATTTCACACACCTCTTCCAAGACTTTCAAAGTGCTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 208975 41 + 6586416 TCTTGATTTCACACACCTTTTCCAAGACTTTCAAAGTGCTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146575845 40 - 204313951 CCTT-ATTCCACACACCTCTTTCAAGACTTTCAAAGTGCCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 412955 40 - 2125214 CCTT-ATTCCACACACCTCTTTCAAGACTTTCAAAGTGCCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 36045 40 + 376347 CCTT-ATTCCACACACCTCTTTCAAGACTTTCAAAGTGCAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2155943 41 - 8137123 TCTTGATTTCACATATTTCTTCCAAGATTTTCAAAGTGCTC i otoGar3.GL873611 I 1066 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e nomLeu3.chr20 82876 1109 + 85365473 I a score=27630.000000 s hg38.chr7_KI270899v1_alt 59365 4 + 190869 CTTT s gorGor5.CYUI01015914v1 20265 4 - 432965 CTTT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33922286 4 + 185818997 CTTT i rheMac8.chr3 C 0 I 1989 s macFas5.chr3 33538259 4 + 192294377 CTTT i macFas5.chr3 C 0 I 1989 s macNem1.NW_012019910v1 4299515 4 - 9440265 CTTT i macNem1.NW_012019910v1 C 0 I 1989 s cerAty1.NW_012002954v1 16889090 4 - 21915920 CTTT i cerAty1.NW_012002954v1 C 0 I 1986 s chlSab2.chr28 29241 4 - 21531802 CTTT i chlSab2.chr28 C 0 I 1948 s manLeu1.NW_012101810v1 50859 4 - 2515279 CTTT i manLeu1.NW_012101810v1 C 0 I 1986 s colAng1.NW_012117710v1 209016 4 + 6586416 CTTT i colAng1.NW_012117710v1 C 0 I 2198 s calJac3.chr2 146575885 4 - 204313951 CTTT i calJac3.chr2 C 0 I 1774 s cebCap1.NW_016107703v1 412995 4 - 2125214 CTTT i cebCap1.NW_016107703v1 C 0 I 1829 s aotNan1.NW_018514293v1 36085 4 + 376347 CTTT i aotNan1.NW_018514293v1 C 0 I 1827 s otoGar3.GL873611 2155984 4 - 8137123 CTCT i otoGar3.GL873611 C 0 I 1831 e canFam3.chr6 60970986 5164 - 77573801 I e nomLeu3.chr20 82876 1109 + 85365473 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=780.000000 s hg38.chr7_KI270899v1_alt 59369 2 + 190869 GA s gorGor5.CYUI01015914v1 20269 2 - 432965 GA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 83985 2 + 85365473 GG i nomLeu3.chr20 I 1109 C 0 s otoGar3.GL873611 2157819 2 - 8137123 GA i otoGar3.GL873611 I 1831 C 0 e colAng1.NW_012117710v1 209020 2198 + 6586416 I e canFam3.chr6 60970986 5164 - 77573801 I e chlSab2.chr28 29245 1948 - 21531802 I e manLeu1.NW_012101810v1 50863 1986 - 2515279 I e cerAty1.NW_012002954v1 16889094 1986 - 21915920 I e macNem1.NW_012019910v1 4299519 1989 - 9440265 I e macFas5.chr3 33538263 1989 + 192294377 I e rheMac8.chr3 33922290 1989 + 185818997 I e aotNan1.NW_018514293v1 36089 1827 + 376347 I e cebCap1.NW_016107703v1 412999 1829 - 2125214 I e calJac3.chr2 146575889 1774 - 204313951 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1808.000000 s hg38.chr7_KI270899v1_alt 59371 3 + 190869 AAC s gorGor5.CYUI01015914v1 20271 3 - 432965 AAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 83987 3 + 85365473 AGC i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146577663 3 - 204313951 AAC i calJac3.chr2 I 1774 C 0 s otoGar3.GL873611 2157821 3 - 8137123 AAT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 209020 2198 + 6586416 I e canFam3.chr6 60970986 5164 - 77573801 I e chlSab2.chr28 29245 1948 - 21531802 I e manLeu1.NW_012101810v1 50863 1986 - 2515279 I e cerAty1.NW_012002954v1 16889094 1986 - 21915920 I e macNem1.NW_012019910v1 4299519 1989 - 9440265 I e macFas5.chr3 33538263 1989 + 192294377 I e rheMac8.chr3 33922290 1989 + 185818997 I e aotNan1.NW_018514293v1 36089 1827 + 376347 I e cebCap1.NW_016107703v1 412999 1829 - 2125214 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=227125.000000 s hg38.chr7_KI270899v1_alt 59374 51 + 190869 ATCCTCCGAGCCCCACGCTGGCCTCAACCGGGGAAAGTGCTCTGCTACCCT s gorGor5.CYUI01015914v1 20274 51 - 432965 ATCCTCCGAGCCCCACGCTGGCCTCAACCGGGGAAAGTGCTCTGCTACCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 83990 51 + 85365473 ATCCTCCGAGCCCCGCGCTGGCCTCAACCAGGGAAAGTGCTCTGCTACCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33924279 51 + 185818997 ATCCTCTGAGCCCCGCACTGGCCTCAACCGGAGAAAGTGCTCTGCTACCCT i rheMac8.chr3 I 1989 C 0 s macFas5.chr3 33540252 51 + 192294377 ATCCTCTGAGCCCCGCACTGGCCTCAACCGGAGAAAGTGCTCTGCTACCCT i macFas5.chr3 I 1989 C 0 s macNem1.NW_012019910v1 4301508 51 - 9440265 ATCCTCTGAGCCCCGCACTGGCCTCAACCGGAGAAAGTGCTCTGCTACCCT i macNem1.NW_012019910v1 I 1989 C 0 s cerAty1.NW_012002954v1 16891080 51 - 21915920 ATCCTCTGAGCCCCGCGCTGGCCTCAACCTGAGAAAGCGCTCTGCTACCCT i cerAty1.NW_012002954v1 I 1986 C 0 s chlSab2.chr28 31193 51 - 21531802 ATCCTCTGAACCCCGTGCTGGCCTCAACCGGGGAAAGTGCTCTGCTACCCT i chlSab2.chr28 I 1948 C 0 s manLeu1.NW_012101810v1 52849 51 - 2515279 ATCCTCTGAGCCTGGCGCTGGCCTCAACCTGAGAAAGTGCTCTGCTACCCT i manLeu1.NW_012101810v1 I 1986 C 0 s colAng1.NW_012117710v1 211218 50 + 6586416 ATCCTCTGAGCCCCGCGCTGGCCTCAACCGG-GAAAGTGCTCTGCTACCCT i colAng1.NW_012117710v1 I 2198 C 0 s calJac3.chr2 146577666 39 - 204313951 ATCCTCTAAGCCCCACTCTGGCTTCAACAAGACAAA---------TAT--- i calJac3.chr2 C 0 C 0 s otoGar3.GL873611 2157824 50 - 8137123 ATCCTCCAAGCCTCACTCTGACTTCAACTGG-TCAGGTATTCTTCCTCCCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e aotNan1.NW_018514293v1 36089 1827 + 376347 I e cebCap1.NW_016107703v1 412999 1829 - 2125214 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=321936.000000 s hg38.chr7_KI270899v1_alt 59425 55 + 190869 CTCCAAGGACAATTGGT---TCTTGGG-AAGGTCTGCCCCACACTGGGCCAACCACGAA s gorGor5.CYUI01015914v1 20325 55 - 432965 CTCCAAGGACAATTGGT---TCTTGGG-AGTGTCTGCCCCACACTGGGCCAACCACGAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 84041 55 + 85365473 CTCCGAGGACAGTTGGT---TCTTGGG-AGGGTCTGCCCCACACTGGGCCAGCCACGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33924330 55 + 185818997 CTCCAAGGACAATTGGT---TCTTGGG-AGGGTCTGCCCCACACGAGGCCAGCCATGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33540303 55 + 192294377 CTCCAAGGACAATTGGT---TCTTGGG-AGGGTCTGCCCCACACGAGGCCAGCCATGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4301559 55 - 9440265 CTCCAAGGACAATCGGT---TCTTGGG-AGGGTCTGCCCCACACGAGGCCAGCCATGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16891131 55 - 21915920 CTTCAAGGACAATTGGT---TCTTGGG-AGGGTCTGCCCCACACCAGGCCAGCCATGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 31244 55 - 21531802 CTCCAAGGACAATTGGT---TCTTGGA-AGGGTCTGCCCCACACGAGGCCAGCCATGAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 52900 55 - 2515279 CTCCAAGGACAATTGGT---TCTTGGG-AGGGTCTGCCCCACACCAGGCCAGCCATGAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 211268 55 + 6586416 CTCCAAGGACGATTGGT---TCTTGGG-AGGGTCTGCCCCACACGAGGCCAGCCATGAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146577705 58 - 204313951 CTCCAAGGATAACTGGTTTGTTGTGGG-GGGCTCTGCCCCGCACTGGGCCAGCCACAAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 414828 55 - 2125214 CTCCAAGGATAATTGGT---TTGTGGG-AGGCTCTGCCCCACACTGGGCCAGCCACAAG i cebCap1.NW_016107703v1 I 1829 C 0 s otoGar3.GL873611 2157874 56 - 8137123 CTCCAAGGACAGCTGGC---CCAGGGGCAGGCTCTTCCCCACACTGGGCCAGTCACTGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e aotNan1.NW_018514293v1 36089 1827 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=961588.000000 s hg38.chr7_KI270899v1_alt 59480 148 + 190869 CCTTCCTTGGGAATTTCTGAATTAGAACCAACAGCCAAGGCTCATCCACCCCTGGG-------------GTGACCAATACACATtacagaccaggagccagaggactggttgctttaaaacaggaacaaaactgaatctg-gaccagcagctgcaactagag s gorGor5.CYUI01015914v1 20380 148 - 432965 CCTTCCTTGGGAATTTCTGAATTAGAACCAACAGCCAAGGCTCATCCACCCCTGGG-------------GTGACCAATACACATtacagaccaggagccagaggactggttgatttaaaacaggaacaaaactgaatctg-gaccagcagctgcaactagag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 84096 148 + 85365473 CCTTCCTTGGGAATTTCTGATTTAGAACCAACAGCCAAGGCTCATCCACCCCTGGG-------------GTGACCAATACACATtacagaccaggagtcagaggactggttgatttaaaacagcaacaaaactgcgtctg-gaccagcagctgcaactagag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33924385 148 + 185818997 CCTTCCTTGGGAATTTCTGAATTAGAACCAACAGCCAAGGCTCATGCATGCCTGGG-------------GTGACCAAGGCCCgttacagacctggagccagaggactggctgatttacaacagcaacaaaactgcatctg-caccagcagctgcaactggag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33540358 148 + 192294377 CCTTCCTTGGGAATTTCTGAATTAGAACCAACAGCCAAGGCTCATGCATGCCTGGG-------------GTGACCAAGGCCCgttacagacccggagccagaggactggctgatttacaacagtaacaaaactgcatctg-caccagcagctgcaactggag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4301614 148 - 9440265 CCTTCCTTGGGAATTTCTGAATTAGAACCAACAGCCAAGGCTCATGCATGCCTGGG-------------GTGACCAAGGCCCgttacagacccggagccagaggactggctgatttataacagcaacaaaactgcatctg-caccagcagctgcaactggag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16891186 148 - 21915920 CCTTCCTTGGGAATTTCTGAATTAGAACCAACAGCCAAGGCTCATGCATGCCTGGG-------------GTGACCAAGGCCCgttacagacccggagccagaggactggctgatttacaacagcaacaaaactgcatctg-caccagcagctgcaactggag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 31299 147 - 21531802 -CTTCCTTGGGAATTTCTGATTTAGAACCAACAGCCAAGGCTCATGCATGCCTGGG-------------GTGACCAAGGCCCgttacagactcggagccagaggactggctgatttacaacagcaacaaaactgcatctg-caccagtagctggaactggag i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 52955 148 - 2515279 CCTTCCTTGGGAATTTCTGAATTAGAACCAACAGCCAAGGCTCATGCATGCCTGGG-------------GTGACCCAGGCCCgttacagacccggagccagaggactggctgatttacaacagcaacaaaactgcatctg-caccagcagctgcaactggag i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 211323 148 + 6586416 CCTTCCTTGGGAAATTCTGAATTAGAACCAACAGCCAAGGTGCATGCATGCCTGGG-------------GTGACCAAGGCCCgttacagacccggagccagaggactggctgatttacaacagcaacaaaactgcatctg-gaccagcagctgcaactggag i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146577763 148 - 204313951 CCTTCCTTGGGAATTTCTGCATTAGAACCAACAGCCAGGGATCATCCATCCCTGGC-------------GTGACCAGTACCCATtgcagaccaggagccaggggactggctgattggcaacagcaacaaaaatgcatctg-gaccagcagctgcaaccggag i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 414883 161 - 2125214 CCTTCCTTGGGAATTTCTGCATTAGAACCAACAGTCAGGGCTCATCCATCCCTGACAGTGGGTACTGGGGCGACCAGTACCCATtgcagaccaggtgccagaggactggttgattggcaacagcaacaaaaatgcatctg-gaccagtcactgcaattggag i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 37916 148 + 376347 CCTTCCTTGGGCATTTCTGCATTAGAACCAACAGCCAAGGCTCATCCACCCCGGTG-------------GCGACCGGTACCCATtgcagaccaggagccagaagactggttgattggcaacagcaacaaaaatgcatctg-gaccagcagctgcaaccggag i aotNan1.NW_018514293v1 I 1827 C 0 s otoGar3.GL873611 2157930 138 - 8137123 CCAGGTTTGGGAATTTCTGGACTAG-ATTAAGGGTCAAGGTTCATCTCTCCCTGAGa------------atgactgacacctgt-------caggtgccagaggacctgctgatttgtggtggcaacaaaa----atctgtggacagcagctgcacctggag i otoGar3.GL873611 C 0 I 261 e canFam3.chr6 60970986 5164 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=13689.000000 s hg38.chr7_KI270899v1_alt 59628 4 + 190869 tgac- s gorGor5.CYUI01015914v1 20528 4 - 432965 tgac- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 84244 5 + 85365473 tgact i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33924533 5 + 185818997 tgact i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33540506 5 + 192294377 tgact i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4301762 5 - 9440265 tgact i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16891334 5 - 21915920 tgact i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 31446 5 - 21531802 tgacc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 53103 5 - 2515279 tgact i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 211471 5 + 6586416 tgacc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146577911 4 - 204313951 tgac- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 415044 4 - 2125214 tgac- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 38064 4 + 376347 tgac- i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2158068 261 - 8137123 I e canFam3.chr6 60970986 5164 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1838841.000000 s hg38.chr7_KI270899v1_alt 59632 284 + 190869 ccc-ggttaagtttatgataatcctcagtccttctccaagagctgtctcccttccgtgcgggccgagtaggtgagctgtacggagatgtggtaggaatcccacccctgcctcct-caagtctgtgatggtggccctcatctctgcaatcctccagggatatggtattgcattt-------------------------agtttgctattttcacaggaagacgcagttccagcggcctctgtttggcctttctgaccataacagctctcgctctgtggcccggagagccaatgtgaggattttgcccattg s gorGor5.CYUI01015914v1 20532 283 - 432965 ccc-ggttaagtttatgataatcctcagtcctcctccaagagctgtctcccttctgtgcgggccgagtaggtgagctgtacggagatgtggt-ggaatcccacccctgcctcct-caagtctgtgatggtggccctcatctctgcaatcctccagggatgtggtattgcattt-------------------------agtttgctattttcataggaagacgcagtgccagcggcctctgtttggcctttctgaccataacagctctcgctctgtggcccggagagccaatgtgaggattttgcccattg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 84249 280 + 85365473 ctt-ggttaagtttatgatgatcctcagtccttctcc----gctgtctcccttctgtgcaggccgaggaggtgagctgtatggagatgtggtaggaatcccacccctgcctcct-caagtctgtgatggtgaccctcatctctgcagtcctccagggatgcggtattgtgttt-------------------------agtttgctattttcatgggaagactcagttccagtggcctctggttggcctttctgaccataacagccctcgctctgtggcccagagtgccaatgtgaggattttgcccattg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33924538 283 + 185818997 ccc-agttaagtttatgacaattctcagtcctgctccaagagctgtgtcccttctgtgcaggccgagtaggtgagctgtgtggggatgtggtgggactcccacccctgcctcct-caagtctgtgatgagggccctcatctctgcaatcctccagggatatggtattgtgttt-------------------------agttcgctattttcagaggaagacgcagttccagggccctctgcttggcctttctgaccataaca-ccctcgctctgtggcccagagagctaatgtgaggattctgcccgttg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33540511 283 + 192294377 ccc-agttaagtttatgacaattctcagtcctgctccaagagctgtgtcccttctgtgcaggctgagtaggtgagctgtgtgaggatgtggtgggactcccacccctgcctcct-caagtctgtgatgagggccctcatctctgcaatcctccagggatatggtattgtgttt-------------------------agttcgctattttcagaggaagacgcagttccagggccctctgcttggcctttctgaccataaca-ccctcgctctgtggcccagagagctaatgtgaggattctgcccgttg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4301767 283 - 9440265 ccc-agttaagtttatgacaattctcagtcctgctccaagagctgtgtcccttctgtgcaggccgagtaggtgagctgtgtggggatgtggtgggactcccacccctgcctcct-caagtctgtgatgagggccctcatctctgcaatcctccagggatatggtattgtgttt-------------------------agttcgctattttcagaggaagacgcagttccagggccctctgcttggcctttctgaccataaca-cccttgctctgtggcccagagagctaatgtgaggattctgcccgttg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16891339 284 - 21915920 ccc-agttaagtttatgacaattctcagtcctgctccaagagctgtgtcccctctgtgcaggccgagtaggtgagctgtgtggggatgtggtgggactcccacccctgcctcct-caagtctgtgatgagggccctcatctctgcaatcctccagggatatggtattgcgttt-------------------------agtttggtattttcagaggaagacgcagttccagggccctctgcttggcctttctgaccataacagccctcgctctgtggcccagagagctaatgtgaagattctgccggttg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 31451 284 - 21531802 ccc-agttaagtttatgacaattctcagtcctgctccaagagctgtgtcccttctgtgcaggccgagtaggtgagctgtgtggggatgtggtgggactcccacccctgcctcct-caagtctgtgatgagggccctcatctctgcaatcctccagggatatggtattgcattt-------------------------agtttgctattttcagaggaattcgcagttccaggggcctctgcttggcctttctaaccataacagccctcgctctgtggcccagagagctaatgtgaggattctgcccgtta i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 53108 283 - 2515279 ccc-agttaagtttatgacaattctcagtcctgctccaagagctgtgtcccctctgtgcaggccgagtaggtgagctgtgtggggatgtggtgggactcccacccctgcctcct-caagtctgtgatgagggccctcatctctgcaatcctccagggatatggtattgcgttt-------------------------agtttgctattttcagaggaagacgcagttccagggccctctgcttggcctttctgaccgtaacagccctcgctctgtggcccagagagctaatgtgaagattctg-cagttg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 211476 284 + 6586416 ccc-agttaagtttatgacagtcctcagtcctgctccaagagctgtgtgccttctgtgcaggccgcgtaggtgagctgtgtggggatgtggtgggactcccacccctgcctcct-caagtctgtgatgggggccctcagctctgcaatcctccagggatacagtattgccttt-------------------------agtttgctgttttcagaggaagacgcagttccagtggcctctgctcggcctttctgaccacaacagccctcgctccctggcccagagagccaatgtgaggattctgcccgttg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146577915 308 - 204313951 ccc-ggttaagtttatgataatcctcagtccttctccaagagctgtctcccttctgtgcaggc-aagtaggtgagctgtatggggatgtggtgggaatcccacccttgcctcct-caggtctgtgatggtggcactaatctctgcagccctcccgggatgtggtattgcatttagtttgctattttcatattgcattgagtttgctattttcatagggagaggcagttccagtgccttctgattggtctttctgaccataacagcccttgctctgtcgcccagagagccagtgtgaggattctgcccattg i calJac3.chr2 C 0 I 2 s cebCap1.NW_016107703v1 415048 283 - 2125214 ccc-ggttaagtttatgataatcctcagtccttctccaagagctatctcccttctgtgcaggc-aagtaggtgagctgtatggggatgtggtgggaatcccacccttgcctcct-caggtctgtgatggtggcactaatctctgcaaccctcccgggatgtggtattgcattt-------------------------agtttgctattttcttagggacaggcagttccagtgccttctgattggcctttctgaccataacagccctcactctgtggcccagagagccaatgtgaggattctgcccattg i cebCap1.NW_016107703v1 C 0 I 10 s aotNan1.NW_018514293v1 38068 309 + 376347 cccgggttaagtttatgatgatcctcaatccttctccaagagctgtctcccttctgtgcaggc-aagtaggtgagttgtctggggatgtggtgggaatcccaccctcgcctcct-caggtctgtgatggtggcaccaatccctgcagccctcccggggtgtggtattgcattgagttttctattttcatgttgcatttggtttgctattttcacagggagaggcagttccagtgccttctgattggcctttctgaccacagcggccctcgctctgtggcccggagagccaatgtgaggattctgcccattg i aotNan1.NW_018514293v1 C 0 I 2 s otoGar3.GL873611 2158329 268 - 8137123 cct-gggtaactttgtgatcacccactgcagttctccaggagctgtctctctccc--acaggctaaagaggtgagttgaatgaggatgcagtggggatcccacccttgcatcctcccagtcctcaatggtggttctagcctctgcggtccctccaggagtgggtgccatactt-------------------------ggtctgttatcttcctgggaag--gcagttctggc-ccttccccttggcctttcctatgataacagcattcactccacag------------gtctggggattctgctctttg i otoGar3.GL873611 I 261 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=37400.000000 s hg38.chr7_KI270899v1_alt 59916 7 + 190869 ttgaata s gorGor5.CYUI01015914v1 20815 7 - 432965 ttgaata i gorGor5.CYUI01015914v1 C 0 I 1 s nomLeu3.chr20 84529 7 + 85365473 ttgaata i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 33924821 7 + 185818997 ctgaata i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33540794 7 + 192294377 ctgaata i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4302050 7 - 9440265 ctgaata i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16891623 7 - 21915920 ctgaata i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 31735 7 - 21531802 ctgagta i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 53391 7 - 2515279 ctgaata i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 211760 7 + 6586416 ctcaata i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chr2 146578225 7 - 204313951 ccaaata i calJac3.chr2 I 2 I 1 s aotNan1.NW_018514293v1 38379 7 + 376347 ccgaata i aotNan1.NW_018514293v1 I 2 I 1 s otoGar3.GL873611 2158597 7 - 8137123 ctgaatg i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e cebCap1.NW_016107703v1 415331 10 - 2125214 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=2316405.000000 s hg38.chr7_KI270899v1_alt 59923 378 + 190869 gtcagttcaagtcatgaatttgggaactggggaaataaccacagg-------gtggacgcagtgggcccc-----------actatgcatcaaacctgagccaaaactctgctgacccaaaagtccccaccctgact-gtgaaccacagtgacatttggggtttccaggagttggtgtcatttcggagccagtgtccagtaacgcttgcagagtctgatcagttcccttccacagtagagacagcggccacagcgtcttcagggaaggctgggaggaaggtgaagcctctatggtttcaccaggtggcagtgtggtgggcccttcct-ccaggggctctgggtctgtaaactggttta--agtctgagaattgagatgctgtgactctctattgtggtga s gorGor5.CYUI01015914v1 20823 374 - 432965 gtcagttcaagtcatgaatttgggaactggggaaataaccacagg-------gtgggtgca-tgggcccc-----------actatgcatcaaacc-gagccaaaactctgctgacccaaaagtccccaccctgact-gtgaaccacagtgacatttggggtttccaggagttggtgtcatttcagagccagtgtccagtaacgcttggagagtctgatcagttcccttccacagtggagacagcggccacagcgtcttcagggaaggctgggaggaaggtgaagcctctatggtttcaccaggtggcagtgtggtgggcccttcct-ccaggggctctgggtctgtaaactggttta--agtctgagaattgagatgctgtga--ctctattgtggtga i gorGor5.CYUI01015914v1 I 1 C 0 s nomLeu3.chr20 84537 368 + 85365473 gtcaattcaagtcatgaatttgggaactggggaagtaaccacagg-------gtggacccagtgggcccc-----------gctgcacatcaaacctgagccaaaactctgctgacccaaaagtccccaccctgacc-gtgaaccacagtgacatttggggtttccaggagctggtgtcacttcagagccagtgtccagtaacgcttggagagcctgatcagttcccttccgcagtggagacagcggccaccgtgtcttcagggaaggctgggaggaagacgaagcctctatggtttcaccaggtggc--------gggtccttcct-ccaggggctctgggtctgtgaactggttta--agtctgagaattgagatgctgtga--ctctattgtggtga i nomLeu3.chr20 I 1 C 0 s rheMac8.chr3 33924829 375 + 185818997 gtcaattcaagtaatgaatccgggaactggggaaatagccacagg-------gtggacccagtgggcccc-----------gctatgcatcaaacctgagccgaaactctgctgacccccaaggccccaccccgact-gtggac--cagtgacatctgggatttccaggagttggggtccgttgagagccagtgtccagtaatgcttggagagtctgatcagttcccttccacagtggagacagcagccacagcgtcttcagggaaggctgggaggaagatgaagcctctgtggtttcaccaggtggcagcgtggtgaatgcttcct-cca-gggctctgggtctgtgacccggctga--agtctgagaattgagatgctgtgactttctattgtggtga i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33540802 375 + 192294377 gtcaattcaagtaatgaatccgggaactggggaaatggccacagg-------gtggacccagtgggcccc-----------gctatgcatcaaacctgagccgaaactctgctgacccccaaggccccaccccgact-gtggac--cagtgacatctgggatttccaggagttggggtccgttgagagccagtgtccagtaatgcttggagagtctgatcagttcccttccacagtggagacagcagccacagcgtcttcagggaaggctgggaggaagatgaagcctctgtggtttcaccaggtggcagcgtggtggatgcttcct-cca-gagctctgggtctgtgacccggctga--agtctgagaattgagatgctgtgactttctattgtggtga i macFas5.chr3 I 1 I 303 s macNem1.NW_012019910v1 4302058 375 - 9440265 gtcaattcaagtaatgaatccaggaactggggaaatagccacagg-------gtggacccagtgggcccc-----------gctatgcatcaaacctgagccgaaactctgctgacccccaaggccccaccccgact-gtggac--cagtgacatctgggatttccaggagttggggtccgttgagagccagtgtccagtaatgcttggagagtctgatcagttcccttccacagtggagacagcagccacagcgtcttcagggaaggctgggaggaagatgaaGCCTCTGTGGTTTCACCAGGTGGCAGCGTGGTGAATGCTTCCT-CCA-GGGCTCTGGGTCTGTGACCCGGCTGA--AGTCTGAGAATTGAGATGCTGTGACTTTCTATTGTGGTGA i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16891631 375 - 21915920 gtcaattcaagtaatgaatctgggaactggggaaataaccacagg-------gtggacccagtgggcccc-----------gctatgcatcaaacctgagccgaaactctgctgacccccagggccccaccccgact-gtggac--cagtgacatctgggatttccaggagttggggtccgttgagagccagtgtccagtaatgcttggagagtctgatcagttcccttccacagtggagacagcagccacagcgtcttcagggaaggctgggaggaagatgaagcctctgtggtttcaccaggtggcagcgtggtaggtgcttcct-cca-gggctctgggtctgtgacccggctga--agtctgagaattgagatgctgtgactctctattgtggtga i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 31743 375 - 21531802 gtcaattcaagtaatgaatctgggaactggggaaataaccacagg-------gtggacccattgggCCCT-----------GCTATACATCAAacctcagccaaaactctgctgacccccaaggccccacccagact-gtggac--cagtgacatctgggatttccaggagttggggtccgttcagagccagtgtccagtaatgcttggagagtctgatcagttcccttccacagtggagacagcagccacagcgtcttcagggaaggctgggaggaagatgaagcctctgtggtttcaccaggcggcagcatggtgggtgcttcct-cca-gggctctgggtctgtgacccggctga--agtctgagaattgagatgctgtgactctctattgtggtga i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 53399 375 - 2515279 gtcaattcaagtaatgaatctgggaactggggaaataaccacagg-------gtggacccagtgggcccc-----------gctatgcatcaaacctgagccgaaactctgctgacccccagggacccaccccgact-gtggac--cagtgacatctgggatttccaggagttggggtccgttgagagccagtgtccagtaatgcttggagagtctgatcagttccgttccacagtggagacagcagccacagcgtcttcagggaaggctgggaggaagatgaagcctctgtggtttcaccaggtggcagcgtggtgggtgcttcct-cca-gggctctgggtctgtgacccggctga--agtctgagaattgagatgctgtgactgtctattgtggtga i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 211768 375 + 6586416 gtcgattcaagtaatgaatctgggaactggggaaataaccacagg-------gtggacccagtgggcccc-----------gctatgcatcaaacctgagccgaaactctgctgacccccaaggccccaccccgact-gtggac--cagtgacatctgggatttccaggagttggggtccgttcagagccagtgtccagtaacgcttggagagtctgatcagttcccttccacagtggagacagcagccacagcatcttcagggaaggctgggaggaagatgaagcctctgcagtttcaccaggcggcagtgtggtgggcccttcct-cct-gggctctgggtctgtgcatcggctga--agtctgagaattgagatgctgtgactctctattgtggtga i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chr2 146578233 348 - 204313951 gtcaattcaagtaatgaatttgggaactggggaaataaccacagg-------gtggacacagcaggtcc------------actgtgcaacaaacctgagccgaaactt-gctgaccccaaagt-cccaccctgact-gtggaccacagtgacgtttggggtttccaggagttgatgtcagttcagagccagtgtccagtaacacttggagagtctgaacagttcccttccatgatgg---------------------------aggctgggaggaagatgaagcctctgtggtttcaccaggtggcagtgtgctgggcccttcct-ccaggggctctgggtctgtgaactggttta--tgtctgagaattgaagtgctgtgactctctattgtggtaa i calJac3.chr2 I 1 C 0 s cebCap1.NW_016107703v1 415341 340 - 2125214 gtcaattcaagtaatgaatttaggaactggggaaataaccacagg-------gtggacacagggggtcc------------actgtacaacaaacctgagccgaaactc-gctgaccccaaagtccccaccctgact-gcggaccacagtgacgtttggggtttccaggagttggtgtccattcagagccagtgtccagtaacacttgg---------acggttcccttccatggtga---------------------------aggctgggaggaagatgaagcctctgtggtctcaccaggtggcagtgtgctgggcccttcct-ccaggggctctgggtctgtgaactggttta--tgtctgagaattgaggtgctgtgactctctattgtggtga i cebCap1.NW_016107703v1 I 10 C 0 s aotNan1.NW_018514293v1 38387 348 + 376347 gtcaattcaagtaatgaatttgggaactgaggaaa-aaccaccgg-------gtggacacagggtgtcc------------actgtgcaacaaacctgagccgaaactc-gctgaccccgaagtccccaccctgact-gcggaccacggtgatctttggggtttccaggagttggtgtcagttcagagccagtgtccagtaacacttggagagtctgaacagttccctCCCACGGTGG---------------------------AGGCTGGGAGGAAGATGAAGCCTCTGTGGTTTCACCAGGTGGCCGTGTGCTAggcccctcct-acaggggctctgggtctgtgaactggttca--tgtctgagaattgaggtgctgtgactctctattgtggtga i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2158604 378 - 8137123 --------------tgaatttgggaaccaggaaaatgaccaaaagagaaatcgaggacccactgggttccctacaaggtgagccttac-ttaaacctgcacaatcacccaact-cccccaaagcccttgctatgactagtgggccactgagacgtttcgggtttctaggacttagtgtcagttcatagccagcgtctagtaatccctgaaaagtctgattagttcccttgcatgatggagagagtggccaccatccctttggggaaagatgggaggaagacaaagcatctatacttttggcaagtaccagtgcaatga---cgtcctgccagggattctgggt-tgagagctggcctgatagtttgggagctcagggcctgtga--ctttgtcttggtaa i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=3614.000000 s hg38.chr7_KI270899v1_alt 60301 2 + 190869 -ca s gorGor5.CYUI01015914v1 21197 2 - 432965 -ca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 84905 2 + 85365473 -ca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33925204 2 + 185818997 -ca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33541480 2 + 192294377 -CA i macFas5.chr3 I 303 C 0 s macNem1.NW_012019910v1 4302433 2 - 9440265 -CA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16892006 2 - 21915920 -ca i cerAty1.NW_012002954v1 C 0 I 448 s chlSab2.chr28 32118 2 - 21531802 -ca i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 53774 2 - 2515279 -ca i manLeu1.NW_012101810v1 C 0 I 326 s colAng1.NW_012117710v1 212143 2 + 6586416 -ca i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146578581 2 - 204313951 -aa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 415681 2 - 2125214 -aa i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 38735 2 + 376347 -ca i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2158982 2 - 8137123 tt- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=9548.000000 s hg38.chr7_KI270899v1_alt 60303 3 + 190869 tgt s gorGor5.CYUI01015914v1 21199 3 - 432965 tga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 84907 3 + 85365473 caa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33925206 3 + 185818997 cga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33541482 3 + 192294377 CGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4302435 3 - 9440265 CGA i macNem1.NW_012019910v1 C 0 I 359 s chlSab2.chr28 32120 3 - 21531802 cga i chlSab2.chr28 C 0 I 200 s colAng1.NW_012117710v1 212145 3 + 6586416 cga i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146578583 3 - 204313951 tga i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 415683 3 - 2125214 tga i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 38737 3 + 376347 tga i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2158984 3 - 8137123 caa i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e manLeu1.NW_012101810v1 53776 326 - 2515279 I e cerAty1.NW_012002954v1 16892008 448 - 21915920 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=27270.000000 s hg38.chr7_KI270899v1_alt 60306 4 + 190869 gtca s gorGor5.CYUI01015914v1 21202 4 - 432965 gtca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 84910 4 + 85365473 gtca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33925209 4 + 185818997 gtca i rheMac8.chr3 C 0 I 341 s macFas5.chr3 33541485 4 + 192294377 GTCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4302797 4 - 9440265 GTCG i macNem1.NW_012019910v1 I 359 C 0 s cerAty1.NW_012002954v1 16892456 4 - 21915920 GTCG i cerAty1.NW_012002954v1 I 448 C 0 s chlSab2.chr28 32323 4 - 21531802 GTCG i chlSab2.chr28 I 200 C 0 s manLeu1.NW_012101810v1 54102 4 - 2515279 GTCG i manLeu1.NW_012101810v1 I 326 C 0 s colAng1.NW_012117710v1 212148 4 + 6586416 gttg i colAng1.NW_012117710v1 C 0 I 480 s calJac3.chr2 146578586 4 - 204313951 gtca i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 415686 4 - 2125214 gtca i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 38740 4 + 376347 gtcg i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2158987 4 - 8137123 gtca i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=13621206.000000 s hg38.chr7_KI270899v1_alt 60310 2120 + 190869 gacttctgttcatcaggcctacagcGTGGAtctgtggccaatacattggccacaatgttcctgttgaaacaggtcggggaatgccagctttctgctccaaacatccaggaact-tctccacgcctccaa------------gtggcctgcaaggccccgccggccctgccccattccctctcaactccatct---tccacagctcatggttc--------tcactggcctccctgctcctggaatgatctgggtgtgctcccact----------------------tctcccaggcccagctcgcctggccctcgcctgtctcagtctctgtgcaggtga-caacctcttgggaagaccttccctggccatacctttgaacttgcttcctgctttc-acattgtcta-ccccttttctgctttacttttcttcaaagcccttatcattgccttgcacactgcatgttttaatt---------atttagttgtttattgcgtgtctcctccctctaaaattttaa-tctccattgggtaggacatttCCTGGCACACACTCAGAATTTTTGTGTTATGATTGAAGGAATAACATCAGCAATGCTGTTCTTTCCCTCAATTACTATGTTTCGAGCTTGTGGCAATCTGTAGAAGTTAG-TCAATGGGCCTTACAATCCTGATTTGGAGAAAAGGGGGCCATGAAAAGGAGGGACAAGGTGTCATATATCAATGCGGCCAAGCGCCGACGCTGCCTCCTCCTTCCCCAGATCACCAGGAAGAAGTCAGAGGAGGCTGCTGTTCGTCGACCCACATGCTCCCTTGGGAGCTTGAGAAGCTGCTCCCCCTGGTGCTGCCCCTGGGTGCTGCTTACCGGGAAACTCATGGCATCCGAGATGCTCCACTGCGCTGGGTCTGTCCCGGATCCTCCCCGCAGGTCAGATTCAT-GTCAGGAATGCTGGAGGGTATT-GCGGTCTGGCAGGA--GCTCACTGTAGGGAAGGAGAGGCTGGG----------CTGGATCCCGAGGCTGAGCCGTCCGGCTCTGCAGCCCTCCCGGTGCTCAGTTATCAGGCTCAC-TACCTCTCAGAGGCGTCTCTTCTCTCTGTGGACATTTGTCTGTCACAGCTGCAAGATT-------------------CTCACAATAAACTTGCTCTCCAAATTCCTAAAAGAATTGCTTGCTCCAGTTTAGCCAGCTAAGACTTTCTTGGATAATGGCATAATCTGGAAGGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTATGG-TGAGTCAGGAAAAAC-----------CACATTCACAATATTCAA-------------------------------CAGCAGCGCTGGGCCTTGA-TGCTCCAGGGCAGT------GCAGGGATTAGAGATCTGAGA-GGTTTCATGACGCTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCTAAGGAAGCTCCCTCCATGCCAGCCACCACCTTGTCTCTGCTGGGGAAACAGT-GGTCCA-GGGGCCCTC---AACTGCAGGGAAATTATT--GAACCTCCCAATGTCACTGCATCTCCTCTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCCGCTCTGCCTGTCTGTCCCCGGCTGCGGCCAGACAGCGAGCAGGGAAGAAATCCAGTGTCTGGACTGTTTGCTGGTCTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACAGTTCCCTAAACAAACTTAAATTTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACGTGTGTTTGCAGCCGATGTGGCAACATAGCCACTTGGGTGGGGGTGAACATCACAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTTAGCA---CTTAGTGCAACTTTGCATTTGGCAGAGGTCTTTCTCTTTTGTAGTCCTTGCCACCAACCTC--------ATTACTTGTGAGAGTCTGCCTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCTTGGCTCTGTATTCCTAGG---TAGTGCATTGCCTAGT-GGTtggttaattttaggtgtcaacttgactaggctgagggaaacccagatagctgataaaacatgctttctaagtgcgcctgagagggcgtttccagaagagatcagcatttgaatcaggggagtgagt-gggaaaatccacgctcccc s gorGor5.CYUI01015914v1 21206 2113 - 432965 gacttctgttcttcaggcctacagcGTGGAtctgtggccaatacattggccaaaatgttcctgttaaaacaggtcagggaatgccagctttctgctccaaacatccaggaact-tctccatgcctccaa------------gtggcctgcaaggccccgccggccctgccccattccctctcaactccatct---tccacagctcatggttc--------tcactggcctccctgctcctggaatgatctgggtgtgctcccact----------------------tctcccaggcccagctcgcctggccctcgcctgtctcagtctctgtgcaggtga-caacctcttgggaagaccttccctggccatacctttgaacttgcttcctg-tttc-acattgtcta-ccccttttctgctttacttttcttcaaagcccttatcattgccttgcacactgcatgttttaatt---------atttagttgtttattgcgtgtctcctccctctaaaattttaa-tctccatT-GGTAGGACATTTCCTGGCACACACTCAGAATTTTTGTGTTATGATTGAAGGAATAACATCAGCAATGCTGTTCTTTCCCTCAATTACTATGTTTCGAGCTTGTGGCAATCTGTAGAAGTTAG-TCAATGGGCCTTACAATCCTGATTTGGAGAAAAGGGGGCGATGCAAAGGAGGGACAAGGTGTCATATATCAATGCGGCCAAGAGCCGACGCTGCCTCCTCCTTCCCCAGATCACCAGGAAGAAGTCAGAGGAGGCTGCTGTTCGTCGACCCACGTGCTCCCTTGGGAGCTTGAGAAGCTGCTCCCCCTGGTGCTGCCCCTGGGTGCTGCTTACCAGGAAACTCATGGCATCCGAGATGCTCCACTGTGCTGGGTCTGTCCCGGATCCTCCCCGCAGGTCAGATTCAT-GTCAGGAATGCTGGAGGGTATT-GCAGTCTGGCAGGA--GCTCACTGTGGGGAAGGAGAGGCTGGG----------CTGGATCCCGAGGCTGAGCCATCCGGCTCTGCAGCCCTCCCGGTGCTCAGTTATCAGGCTCAC--ACCTCTCAAAGGCGTCTCTTCTCTCTGTGGACATTTGTCTGTCACAGCTGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAAGAATTGCTTGCTCCAGTTTAGCCAGCTAAGACTTTCTTGGATAATGGCATAATCTGGAAGGATATTTAACAAA-TC--GTTTAAACTGGAAATTATTGACTCTACGG-TGAGTCAGGAAAAAC-----------CACATTCACAATATTCAA-------------------------------CAGCAGCGCTGGGCCTTGA-TGCTCCAGGGCAGT------GCAGGGATTAGAGATCTGAGA-GGTTTCATGACACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTGTAAGGAAGCTCCCTCCATGCCAGCCACCACCTTGTCTCTGCTGGGGAAACAGT-GGTCCA-GGGGCCCTC---AACTGCAGGGAAATTATT--GAACCTCCCAA-GCCACTGCATCTCCTCTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCGGCCAGACAGCGAGCAGGGAAGAAATCCAGTGTCTGGACTGTTTGCTGGTCTGCAGAACCTGTTCTTTTGCAGTATCTGTTTTCCGATGCAGATTTTCACAGTTCCCTAAAGAAACTTAAATTTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATGCACGTGTGTTTGCAGCCGATGTGGCAACATAGCCACTTGGGTGGGGGCGAACATCACAG-CCACAATTCTGCAGTTCAGATTTGGGTTTATCTTAGCA---CTTAGTGCAACTTTGCATTTGGCAGAGGTCTTTCTCTTttgtagcccttgccaccaacctc--------attacttgtgagagtctgcctcatgcctgtctgctcagcagatgagagaccttgaggcctgggaagatcccgccctccttggctctgtattcctagG---TAGTGCATTGCCTAGT-GGTtggttaattttaggtgtcaacttgactaggctgaggaaaacccagatagctgataaaacatgctttctaagtgc-cctgagagggcgtttccagaagagatcagcatttgaatcaggggagtgagt-gggaaaatccacgctcccc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 84914 2138 + 85365473 gacttctgttcgtcaggcctacagcATGGAtctgtggccaacacattggccaaaatattcctgttaaaacaggtcagggaatgccagctttctgctccaaacatccaggaact-tctccatgcctccag------------gtgacctacaaggccccgccggccctgcccccttccttctcaactccgtct---tccacagctcatggttc--------tcactggcctccctgctcctggaatgatccgggtgtgctcccact----------------------tgtcccaggcccagctcgcctggccctcgcctgtctccatctctgtgcaggtga-caacctcttgggaagaccttccctggccatacctttgaacttgcttcctgctttc-acattctcta-ccccttttctgctttacttttcttcaaagcccttatcattgccttgcacaccgcgtgttttaatt---------atctagttgtttattgcctgtctcctccctctgaaattttag-tctccattgggtaggacatttCCTGGCACATGCTCAGAATTTTTG-GTTATGATTGAAGGAATAACATCAGCAGTGCTGTTCTTTCCCTCAGTTACTGTGTTTTGAGCTTGTGGCAATCTATAGAAGTTAG-TTAATGGGCCTTACAATCCTGATTTGGAGAAAAGGGGCTGATGACAAGGATGGACAAGGTGTCATATATCAACACGGCCAAGCGCCGACGCTGCCTCCTCCTTCCCCAGGTCACCGGGAAGAAGTCAGAGGAGGCTGCTGTTCATTAGCCCACGTGCTTCCTTGGGAGCTTGAGAAGCTGCT-CCCCTGGTGCTGCCCCTGGGTGCTGTTTGCCGGGAAACTCATGGCCTCCGAGATGCTCCACTGCGCTGGGTCTGTCCTGGATCCTCCCTGCAGGTCAGATCCAT-GTAAGGAATGCTGGAGGGCATT-GCAGTCTGGCAGGA--GCTCACTGTGGGGAAGGAGAGGCTGGG----------CTGGGTCCCGAGCCTGAGCTGTCAGGCTCTGCAGCCCTCCTGGTGCTCAGTTATCAGGCTCAC-TACCTCTCAAAGGCATCTCTTCTCTATGTGGACATTTGTCTCTCACAGCTGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAAGAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTTCTTGGATAATGGCATAATCTAGAAGGATATTTAACAAACTC--GTTTAAACTGGAAATTATTGACTCTATGG-TGAGTCAGGAAAAACCACGTTCAATGCACATTCACAATATCCAA-------------------------------CAGCAGCGCTGGGCCTTGA-TGCTGCAGGGCAGT------GCAGGGATTGGAGATCTGAGA-GGTTTCATGACGCTTCTCAGGGGAATACACAGGTTCTGGCTTCTTCCAAGGAACCTCCCTCCATGCCAGCCACCACCTTGTCTCTGCTGGGGAAACAGTGGGTCCAGGGGGCCCTC---AACTGCAGGGAAATTATT--GAACCTCCCAGTGTCACTGCATCTCCTCTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTGTGCCTCTCTGTCCCCTGCTGCGGCCAGACAGCGAGCAGGAAAGAAATCCAGCATCTGGACTGTTTGCTGGTCTGCAGAACCTGTTCTCTCGCAGTGTCTG-TTTCCAATGCAGATTTTCACAGTCCCCTAAAGAAACTTAAAATTCCATCCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACGTGTGTTTGGAGCCAACGTGGCAACACAGCCAGTTGGGTGGGGGTGAACATCGCAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTCAGGA---CTTAGTGCAACTGTGCATTTGGC-GAGATCTTTCTCTTTTGTAGCCATTGCCACCAACCTCATGATGTAATTCCttgtgagggtctgcctcatgcctgtctgctcagcagatgagaggccttggggcctgggaagatcccgtcctccttggctctgtattcctagg---tagtgcattgcctagt-ggatggttaattttaggtgtcaacttgactaggctgagggaaacccagatagctgataaaacacgctttctaagcgcgtctgagagggcgtttccagaatagatcagcctttgaatcaggggactgagtagggaaaatccatgctcccc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33925554 2174 + 185818997 GACTTCCGCTCGTCAGGCCTATGGCGTGGACCTGTGGCcaatacattggccaaaatgttcctgttaaaacaggtgggggaatgccagctttctgctgcgaacatccaggaact-tctccgtgcctcgaa------------gtggcgtgcaaggccccgccggccctgccccattccctctcaactccatct---tccacagctcatggctc--------tcactcacctccctgctcctggaatgatccaggtgtgctcccacttcaggcttccctgcttggctgctctcccaggcccagctcgactggccctcgcctgtctcagtgtctgtgcaggtga-caacctcttggg-acgcctttcccggccata-ctttgaacttgcttcctgctttc-acattctcta-caccttttctgctttacttttcttcaaagcacttagcattgccttgcacaccacatgtttt-------------atttagttgtttattgcctgtctcctccctctaaaattttag-tctccattgtggaggacaTTTCCTGGCACACCCTCATGATTTTTGTGTTATGATTGAATGAATGACGTCAGCAATGCCGTTCTTTCCCTCAGTTACTTTGTTTTGAGCTTGTGGCAATCTATAGAAGTTAG-TTAATGGGCCTTACAATCTTGACTTGGAGAA--------------AAGGATGCACAAGGTGTCATATGTCAACACAGCCAAACGCCAACACGGCCTCCTCCTTCCCCAGGTTACCAGGAAGAAGTCAGAGGACGCTGCTGCTCCTTGACTCACGTGCTTCCTTGGGAGCTTGAGAAGCTGCTCCCCCTGGTGCTGCCGC-GGGTGCTGCTTACCGGGAAACCCGCGGCATCCCAGACACTCCACTGTGCTGGGTCTGTCCTGGGTTCTCCCTGCAGGTCAGATCCATGGTAAGGAATGCTGGTGGGCACT-GCAGTCTGGCAGGA--GCTCACTGTGGGGAAGGAGAGGCTGGG----------CTGGATCCCAAGGCTGAGCTGTCAGGCTCTGCAGCCCTCCCAGTGCTCAGTTATCAGGCTCAC-TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTGTCTGTCACAGCCGCAAGATT-------------------CTGAC---AAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAACCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC--CATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGC-GGTTTCATGGCACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTTCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-TGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCATGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAAGA---CTTAGTGCAACTTTGCATTTGGTAGAGGCCTTTCTCTTTTGTAGCCCTTGCCACCAACCTCATCGTGTAATTAC-TGTGAAAGTCTGCTTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCCTGGCTCTGTATTCTGAGG---CAGTGCATTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctcccc i rheMac8.chr3 I 341 C 0 s macFas5.chr3 33541489 2178 + 192294377 GACTTCCGCTCGTCAGGCCTATGGCGTGGACCTGTGGCcaatacattggccaaaatgttcctgttaaaacaggtgggggaatgccagctttctgctgcgaacatccaggaact-tctccgtgcctcgaa------------gtggcgtgcaaggccccgccggccctgccccattccctctcaactccatct---tccacagctcatggctc--------tcactcacctccctgctcctggaatgatccaggtgtgctcccacttcaggcttccctgcttggctgctctcccaggcccagctcgactggccctcgcctgtctcagtgtctgtgcaggtga-caacctcttggg-acgcctttcccggccata-ctttgaacttgcttcctgctttc-acattctcta-caccttttctgctttacttttcttcaaagcccttagcattgccttgcacaccacatgtttt-------------atttagttgtttattgcctgtctcctccctctaaaattttag-tctccattgtggaggacaTTTCCTGGCACACCCTCATGATTTTTGTGTTATGATTGAATGAATGACGTCAGCAATGCCGTTCTTTCCCTCAGTTACTTTGTTTTGAGCTTGTGGCAATCTATAGAAGTTAG-TTAATGGGCCTTACAATCTTGACTTGGAGAA--------------AAGGATGCACAAGGTGTCATATGTCAACACAGCCAAACGCCAACACGGCCTCCTCCTTCCCCAGGTTACCAGGAAGAAGTCAGAGGACGCTGCTGCTCCTTGACTCACGTGCTTCCTTGGGAGCTTGAGAAGCTGCTCCCCCTGGTGCTGCCGC-GGGTGCTGCTTACCGGGAAACCCGCGGCATCCCAGACGCTCCACTGTGCTGGGTCTGTCCTGGGTTCTCCCTGCAGGTCAGATCCATGGTAAGGAATGCTGGTGGGCACT-GCAGTCTGGCAGGA--GCTCACTGTGGGGAAGGAGAGGCTGGG----------CTGGATCCCAAGGCTGAGCTGTCAGGCTCTGCAGCCCTCCCGGTGCTCAGTTATCAGGCTCAC-TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTGTCTGTCACAGCCGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAACCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC--CATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGC-GGTTTCATGGCACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-TGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAAGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTTTGTAGCCCTTGCCACCAACCTCATCGTGTAATTACTTGTGAAAGTCTGCTTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCCTGGCTCTGTATTCTGAGG---TAGTGCATTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctcccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4302801 2173 - 9440265 GACTTCCGCTCGTCAGGCCTATGGCGTGGACCTGTGGCcaatacattggccaaaatgttcctgttaaaacaggtgggggaatgccagctttctgctgcgaacatccaggaact-tctccgtgcctcgaa------------gtggcgtgcaaggccccgccggccctgccccattccctctcaactccatct---tccacagctcatggctc--------tcactcacctccctgctcctggaatgatccaggtgtgctcccacttcaggcttccctgcttggctgctctcccaggcccagctcgactggccctcgcctgtctcagtgtctgtgcaggtga-caacctcttgggaacgcctttcccggccata-ctttgaacttgcttcctgctttc-acattctcta-caccttttctgctttacttttcttcaaagcccttagcattgccttgcacaccacatgtttt-------------atttagttgtttattgcctgtctcctccctctaaaattttag-tctccatTGTGTAGGACATTTCCTGGCACACCCTCATGATTTTTGTGTTATGATTGAATGAATGACGTCAGCAATGCCGTTCTTTCCCTCAGTTACTTTGTTTTGAGCTTGTGGCAATCTATAGAAGTTAG-TTAATGGGCCTTACAATCTTGACTTGGAGAA--------------AAGGATGCACAAGGTGTCATATGTCAACACAGCCAAACGCCAGCACGGCCTCCTCTTTCCCCAGGTTACCAGGAAGAAGTCAGAGGACGCTGCTACTCCTTGACTCACGTGCTTCCTTGGGAGCTTGAGAAGCTGCTCCCCCTGGTGCTGCCGC-GGGTGCTGCTTACCGGGAAACCCGCGGCACCCGAGACGCTCCACTGTGCT-GGTCTGTCCTGGGTTCTCCCTGCAGGTCAGATCCATGGTAAGGAATGCTGGTGGGCACT-GCAGTCTGGCAGGA--GCTCACTGTGGGGAAGGAGAGGCTGGG----------CTGGATCCCAAGGCTGAGCTGTCAGGCTCTGCAGCCCTCCCGGTGCTCAGTTATCAGGCTCAC-TACCTCTCAAAGGCCTTTCTTCTCTACATGGACGTTTGTCTGTCACAGCCGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAACCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC--CATTCAATACACACTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGC-GGTTTCATGGCACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-TGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCCAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCTCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGT-----TTAAGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTttgtagcccttgccaccaacctcatcgtgtaattacttgtgaaagtctgcttcatgcctgtctgctcagcagatgagagaccttgaggcctgggaAGATCCCGCCCTCCCTGGCTCTGTATTCTGAGG---TAGTGCATTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctcccc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16892460 2200 - 21915920 GACTTCCGCTCGTCAGGCCTACTGCGTGGACCTGTGGCcaatacattggccaaaatattcctgttaaaacaggtgggggaatgccagctttctgctgcaaacatccaggaact-tctccgtgccttgaataattaaaacatgtggcgtgcaaggccccgccggccctgccccattccctttcaactccgtct---tccacagctcatggctc--------tcactcgcctccctcctcctggaacgattcaggtgtgctcccacttcaggcttccctgcttggctcctctcccaggcccagctggactggccctcgcctgtctcagtgtctgtgcaggtga-caacctcttgggagcgcctttcctggccata-ctttgaacttgcttcctgctttc-acattctcta-caccttttctgctttgcttttcttcaaagcccttagcattgccttgcacaccacatgttttaattatttagttaatttagttgtttattgcctgtctcctgcctctaaaattttag-tctgcatTGTGTAGGACATTTCCTGGCACACCCTCATGATTTTTGTGTTATGATTGAATGAATGACGTCAGCAATGCCGTTCTTTCCCTCAATTACTTTGTTTTGAGCTTGTGGCAATCTATAGAAGTTAG-TTAATGGGCCTTACAATCTTGACTTGGAGAA--------------AAGGATGCACAAGGTGTCATATGTCAACACAGCCAAACGCCAACACGGCCTCCTCCTTCCCCAGATTACCAGGAAGAAGTCAGAAGAGGCTGCTGCTCCTTGACCCACGTGCTTCCTTGGGAGCTTGAGAAGCTGCTCCCCCTGGTGCTGCCGC-GGGTGCTGCTTACCGGGAAACCCGCGGCATCCGAGAGGCTCCGCTGTGCTGGGTCTGTCCTGGGTTCTCCCTGCAGGTCAGATCCGT-GTAAGGAATGCTGGCGGGCACT-GCAGTCTGGCAGGA--GCTCACTGTGGGGAAGGAGAGGCTGGG----------CTGGATCCCAAGGCTGAGCTGTCAGGCTCTGCAGCCCTCCCAGTGCTCAGTTATCAGGCTCAC-TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTGTCTGTCACAGCCGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAATCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC-ACATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGA-GGTTTCATGGCACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-GGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTCATTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGAC----AGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAACGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTTTGTAGCCCTTGCCACCAACCTCATCGTGTAATTACTTGTGAAAGTCTGCTTCATGCCTGTGTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCCTGGCTCTGTATTCCGAGG---TAGTGCATTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctcccc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 32327 2179 - 21531802 GACTTCCGCTCCTCAGGCCTACGGCGTGGACCTGCGGCcaatacattggccaaaatgttcctgttaaaacaggtgggggaatgccagctttctgctccaaacatccaggaact-tctccgtgcctc------------caagtggcctgcaaggccccgccggccctgccccattccccctcaactccgtct---tccacagctcatggctc--------tcactcgcctccctgctcctggaa-gatccaggtgtgctcccacttcaggattccctgcttggctcctctcccaggcccagctcgactggccctcgcctgtctcagtgtctgtgcaggtgaccgacctcttgggaacgcctttactggccata-ctttgaacttgcttcctgctttc-acattctcta-caccttttctg-tttacttttcttcaaagcccttagcattgccttgcacaccacatgttttaatt---------attcagttgtttattgcctgtctcctccctctaaaattttaa-tctcaatTGTGTAGGACATTTCCTGGCACACCCTCAAAATTTTTGTGTTATGATTGAATGAATGACGTCAGCAATGCCGTTCTTTCCCTCAATTACTTTGTTTTGAGCTTGTGGCAATCTATAGAAGTTAG-TTAATGGGCCTTACAATCTTGACTTGGAGAA--------------AAGGATGCACAAGGTGTCATATGTCAACACAGCCAAACGCCAACACGGCCTCCTCCTTCCCCAGGTTACCAGGAAGAAGTCAGAGGACGCTGCTGCTCCTTGACCCACGTGCTTCCTTGGGAGCTTGAGAAGCTGCTCCCCCTGGTGCTGCCCC-GGGTGCTGCTTACCAGGAAACCTGCGGCATCCGAGACGTTCCGCTGTGCTGGGTCTGTCCTGGGTCCTCCCAGCAGGTCAGATCCAT-GTAAGGAATGCTGGCGGGCACT-GCAGTCTGGCAGGA--GCTCACTGTGGGGAAGGAGAGGCTGGG----------CTGGATCCCAAGGCTAAGCTGTCAGGCTCTGCAACCCTCCCGGTGCTCAGTTATCAGGCTCAC-TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTGTCTGTCACAGCGGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATCCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAATCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAATTGACTCAGAAAAACC-ACATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAGCAGCAGTGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAAGAGCAGGGATTAGATGTCTGAGA-GGTTTCATGGCGCTTCTCAGGGGAATACATGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-GGTCCAGGGAGCCCGC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGCATCTCCACTGGGTCTTCTTTT---ATTTCTTCTTT-CCCCTAGAAAACAC---CTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCATGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTTCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACATAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTTTGTAGCCCTTGCCACCAACATCATCGTGTAATTACTTGTGAGAGCCTGCTTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCTTCCCTGGCTCTGTATTCCGAGG---TAGTGCATTGCCTAGT-Agatggttaattttaggtgtcaacttgactaagctgagggaaacccggagagctgatacaacatgctttctaagtgtgtctgagagggagggtccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctcccc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 54106 2199 - 2515279 GACTTCCGCTCGTCAGGCCTACGGCGTGGACCTGTGGCcaatacattggccaaaatattcctgttaaaacaggtgggggaatgccagctttctgctgcaaacatccaggaact-tctccgtgccttgaataattaaaacatgtggcgtgcaaggccccgccggccctgccccattccctctcaactccgtct---tccacagctcatggctc--------tcactcgcctccctcctcctggaaggatccaggtgtgctcccacttcaggcttccctgcttggctcctctcccaggcccagctcgactggccctggcctgtctcagtgtctgtgcaggtga-caacctcttgggagcgcctttcctggccata-ctttgaacttgcttcctgctttc-acattctcta-caccttttctgctttgcttttcttcaaagcccttagcattgccttgcacaccacatgttttaattatttagttaatttagttgtttattgcctgtctcctgcctctaaaattttag-tctccatTGTGTAGGACATTTCCTGGCACACCCTCATGATTTTTGTGTTATGATTGAATGAATGACGTCAGCAATGCCGTTCTTTCCCTCAATTACTTTGTTTTGAGCTTGTGGCAATCTATAGAAGTTAG-TTAATGGGCCTTACAATCTTGACTTGGAGAA--------------AAGGATGCACAAGGTGTCATATGTCAACACAGCCAAACGCCAACACGGCCTCCTCCTTCCCCAGATTATCAGGAAGAAGTCAGAAGACGCTGCTGCTCCTTGACCCACGTGCTTCCTTGGGAGCTTGAGAAGCTGCTCCCCTTGGTGCTGCCGC-GGGTGCTGCTTACCGGGAAACCCGCGGCATCCGAGAGGCTCCGCTGTGCTGGGTCTGTCCTGGGTTCTCCCTGCAGGTCAGATCCAT-GTAAGGAATGCTGGCGGGCACT-GCAGTCTGGCAGGA--GCTCACTGTGGGGAAGGAGAGGCTGGG----------CTGGATCCCAAGGCTGAGCTGTCAGGCTCTGCAGCCCTCCCAGTGCTCAGTTATCAGGCTCAC-TACCTCTCAAAGGCCTCTCTTCTCTACGTGGACGTTTGTCTGTCACAGCCGCAAGATT-------------------CTGACAATAAACTTGCTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTGGATAATGACATAATCTAGAAAGATATTTAACAAATTC--GTTTAAACTGGAAATTATTGACTCTACAGTTGAGTCAGAAAAACC-ACATTCAATACACATTCGCAATATTCAGCAGCAGCTCAATACACATTGGCAATATTCAACAGCAGCGCTGGGTCCTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGA-GGTTTCATGACACTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTCCGTGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-GGTCCAGGGAGCCCTC---AACTGTAGGGAAATTACT--GACCCTCCCGATGTCACCGTATCTCCACTGGGTCTTCTTTT---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGAC----AGCACGAAAGAAGTCCAGTGTCTGGACTGTTTGCTGATTTGCAGAACCTGTTCTCTCGCAGTATCTGTTTTCCAATGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAACGACTTCATTTCCTGATACCTAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACACAGCCACTTGGGT-GGGGTGAACATCACAGCCCACAATTCTGCACTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCATTTGGCAGAGGCCTTTCTCTTTTGCAGCCCTTGCCACCAACCTCATCGTGT-ATTACTTGTGAAAGTCTGCTTCATGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCCCTGGCTCTGTATTCTGAGG---TAGTGCGTTGCCTAGT-Ggatggttaattttaggtgtcaacttgactaagctgagggaaacccagagagctgatacaacatgctttgtaagtatgtctgagagggaggatccagaagagatcagtacttgaatcaagggactgagcagggaaaatccacgctcccc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 212632 2157 + 6586416 GACTTCCGCTCGTCAGGCCTACAGCGTGGACCTGTGGCcaatacattggccacaatattcctgttaaaacaggtcggggaatgccagctttctgctccaaacatccaggaact-tctctgtgcctccaa------------gtggcctgtaaggccccgccggccctg-cccatgccctctcagcgccgtct---tccacagctcgtggctc--------tcactcgcctccccgctcctggaacgatccaggtgtgctcccacttcaggcttccctgcttggctcctctcccaggcccagctcgactggccctcgcctgtctcagtgtccgtgcaggtga-cggcctctggggaaggcctaccctggccatacctttgaacgtgcttcctgctttc-acattctcta-ccccttttctgctttacttttcttcgaagcccttagcattgccttgcacaccacatgttttaatt---------atttagctgtttattgcctgtctcctccctctaaaatctcag-tctccgttgtgcaggacatttCCCAGCACACCCGCATAATTTTTGTGTTACGATTGAATGAATGACGTCAGCAGTGCCGTTCTTTCCCTCAATTACTTTGTTTTGAGCTTGTGGCAACCTATACAAGTTAA-TTAATGGGCCTTACAATCCTGACTCGGAGAA--------------AAGGATGCACAAGGTGTCGTATGTCAACACGGCCAAGCGCCAACACGGCCTCCTCCTTCCACAGGTTACCAGGAAGAAGTCAGAGGAGGCTGCTGCTCCTTGACCCACGTGCTTCCTTGGGAGCTTGAGAAGCTGCTCCCCCTGGTGCTGCCCC-GGGTACTGCTTACCGGGAAACCCGTGGCACCCGAGACGCTGCGCCGTGCTGGGTCTGTCCTGGGTCCTCCCCGCAGGTCAGATCCAT-GTAAGGAATGCTGGCGGGCACT-GCAGTCTGGCAGGA--GCTCACTGTGGGGAAGGAGAGGCTGGG----------CTGGATCCCAAGGCTGAGCTGTCAGGCTCTGCAGCCCTCCTGGTGCTCAGTTATCAGGCTCAC-TACCTCTcaaaggcctgtcttctctacgtggacattTGTCTGTCACAGCTGCAAGATTGTCTGTCACAGCTGCAAGACTGACAATAAACTTGTTCTCCAAATTCCTAAAATAATTGGTTGCTCCAGTTTAGCCAGCTAAGACTTCCTTAGATAATGACATAATCTAGAAAGATATTTAACAAATTC--ATTTAAACTGGAAATTATTGACTGTACAG-TGAGTCAGAAAAACC-ACATTCAATACACATTCGCAGTATTCAG-------------------------------CAGCAGCGCTGGGTCTTGA-GGCTCCAGGGCAGTGCAGGAGCAGGGATTAGAGGTCTGAGA-GGTTTCAGGACGCTTCTCAGGGGAATACACGGGTTCTGGGTTCTTCCAAGGAACCTCCCTGCATGCCAGCCACCACCTGGTCCCTGCTGGGGAAATAGT-GGTCCAGGCAGCCCTC---GACTGTAAGGAAATTACT--GAACCTTCCGATGTCACCGCGTCTCCACTGGGTCTTCTTTC---ATTCCTTCTTT-CCCCTAGAAAACACCTTCTGACACACTCCTGCTCTGCCTGTCTGTCCCCTGCTGCAGCCAGACAGTGAGCACGAAAGAAGTCCAGTGTCTGGACTGTTCGCTGATTTGCAGAACCTGTTCTCTTGCAGCGTCTGTTTTCCAGTGCAGATTTTCACGGTCCCCTAAAGAAACTTAAAATTCCATTCCCAGAATGACTTCATTTCCTGATACCCAGCCCAAATTCACTTGTGTTTGGAGCCAATGTGGCAACATAACCACTTGGGTGGGGGTGAGCATCACAGCCCACAGTTCTGCACTTCAGATTTGGGTTGATCTTAGGA---CTTAGTGCAACTTCGCCTTTGGCAGAGGCCTTTCTCTTTTGTCGCCCTTGCCACCAACCTCGTCGTGTAATTGCTTGTGAGAGTCTGCTTCACGCCTGTCTGCTCAGCAGATGAGAGACCTTGAGGCCTGGGAAGATCCCGCCCTCGCTGGCTCTGTATTCCGAGG---CAGTGCATGGCCTGGT-Ggatggttaattttaggtgtccacttgactaagctgagggaaacccggaga-------------gctttctcagtgtgtctggga-ggagggtccagaagagatcagtgttggaatcaagggactgagcagggaaaatccacgctcccc i colAng1.NW_012117710v1 I 480 C 0 s calJac3.chr2 146578590 2141 - 204313951 gatttctgttcgtcagaccaagaTCATGaatctgtggccaatccattggccaaaatgtttctgttaaaacaggtcagggaatgccagctttctgcttcaaacattcaagaa----ctccctgtctccca------------gtggcctgcaaggccccgccagccatg-cccattccctctcaactccttct---tccatagcatatggtccagctggctccactggccaccctgcttctggaatgatccgcgtgcactcccacctcaggcttctctggttggctcctttcccagtcctggcatgcctggccctcatctgtctcagggtctgtgcaggtga-tgacctcttgggaaggccttccttggccatacctttgaacttgcttcctgtgttc-acattcccta-ccatttttctgctttactttccttcaaaactgttctcgttgccttgcacacggcatgctttaatt---------atttagttgtttactgcctgtctcctccctctaaaattttag-tctccattgtgtaggacttttCCTGGCACACACTCTTCATTCTGGTGTTACAATT----GAATAATATCAGCAACGCTGTTCTTTCCCTCAGTAACTATGTTTTGAGCTTGTGGCAATCTATAGAAGTTAGTTTAACTGGCCTTACAATCCTGATCTGGAGAAAAGGGGGTCATGAAAAAGACAGACAAGGGGTCATATATCAACATGGCCAAGTGCCAACACAGCCTCCTCCTTCCACAGATTACCAGGGAGGAGTCAGAGCAGGCTGCTGTCCACTGACCCATGTACTTCCTTGGGAGCTTGAGAAGGTGTTCTCCCTGGTGCTGCCCCTGGGTGCTGCTTACCAGGAAACCCATGGCATCTAAGATGCTTCACTGTGCTGGGTCTGTCCTGGATCCTCCCTGTAGCTCAGATCCAT-GTGAGGCATCCTGGAGGGCATT-GCGCTCTGGCAGGG--G-TCATTGTGCGGAAACAGAGGCTGGG----------CTGGATCCCGAGGCTGAGCTGTCAGACTTTGCAACCCTCCTGGTGCTCAGCTATCAGGCTCAC-TAACTTTCAAAGGCCTCTCCTCTCTATGTGGACATT--TCTGTCATAGCTGCAAGGTT-------------------CTGACAATAAGCTTGCTC-CCAAATTCCTAAAAGAATTCGTTGCTCCCATTTAGCCAGCTAAGACTTTCTTGGATAATGACATAATCTAGAAGGATATTTAACGAATTC--ATTTAAACTGGAAATTATTGACTCTGTGG-TGAGTCAGGGAAAACCGCATTCAATACACATTCACAATATTCAG-------------------------------CAGCAGCGCAGGGTGTTGA-TACTCCAGGGCAGT------GCAGGGATTAAGGATCAGAGA-GGTTCCATGGTGCTTCTGAGGGAGATACACAGGTTCTGGGTTCTTCTAAGGAATTTCCCTTCATGCCAGCCACCACCTTGCCCCTGCTAGGGAAGTAGT-GATCCAGGGAGCCCCC---ACCTATAGGGAAATTATT--CAACCTCCTGATGTCACTGCACCTCTTCTGGGTCTTCTTTT---ATCCCTTCTTC-CACCTAGAAAACACCTTCTAATGCACTCCTGCTCTGCCTGCCTGTCCCCTGCTCTGGCTGGACAGAGATCAGGAAAGATGTCCAGCATCCAGACTGTTTGCTGGTTTGAAGAATCTGTTCTCTCACAGTATCTGTTTTCCAGTGCAGATTTTCATAGTCCCCTAAAGAAGCTTAAAATTACATTCCCAGAATGACTTCATTTCCTGATACCCAATCAAATTTCACTTGTGTTTGGAGCTGATGTGGCAATATAACCACTTGGGTGGGGGTAAACATCACAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCA----------------------TGCAGCCCTTGCCACCAACCTCAGGATATAATTACttgtgagaggctgcttcatgcctgtctgctcagtggataagagaccttgaggcctggaaaagtcctgccctccttggctcagtattcctaggtcctagtgtattgcctggtgggatggttaattttaggtgtcaactttactaggctaagggaaa-ctggatagctgataaaacacgctttcccagtgtgtctgagtgggtatttccagaagagatcagcattggaatcagggcactgacttgggaaaaccaatgctcccc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 415690 2140 - 2125214 gacttctgttcatcagaccaagaTCATGAATCTGTGGCCAATCCATTGGCCAAAATGTTCCTGTTAAAACAGGTCTTGGAATGCCAGCTTTCTGCTCCAAATATTCAAGAA----CTccctgcctccca------------gtggcctgcaatgccctgccagccctg-cccGTTCCCCCTCAACACCCTCT---TCCATAGCATATGGTCCAGCTGGCTCCAATGGCCGCCCTGCTCCTGGAGTGATCTGCATGCGCtcacacttcaggcttctctggttggctccttttccagtcccggcatgcctggctcttgcctgtctcagggtctgtgcaggtga-tgacctctcgggaaggccttccctggccatacctttgaacttgcttcctgtgttc-acattcccta-ccctttttctgctttactttccttcaaagctgttctcgttgtcttgcgcatggcatgctttaatt---------atttagttgtttactgcctgtctcct-ccgctaaaattttag-tctcctttgtgaaggacttttCCTGGCACACACTCATCATTCTGGTGTTACGATT----GAATAATATCAGCAACGCTGTTCTTTTCCTCAGTAACTATGTCTGGAGCTTGTGACAATCTATAGAAGTTAGTTTAACTGGCCTTACAATCTTGATCTGGAGAAAAGGGGGTGATGAAAAAGACGGACAAGGGGTCATATATCAACATGGCCAAGTGCCAACACCACCTCCTCCTTCCACAGATTACCTGGTAGGATTCAGAGCAGGCTGCTGTCCATTGACCCATGTGCTTCCTTGGGAGCTTGAGAAGGTGCTCTCCCTGGTGCTGCCCCTGGGTGCTGCTTACCAGGAAACCCATGGCATCTAAGATGCTTCGCTGTGCTGGGTCTGACCTGGATCCTCCCCATAGCTCAGATCCAT-GTGAGGAATCCTGGAGGGCATT-GCGTTCTGGCAGGG--GCTCACTGTGGGGAAACAGAGGCTGGG----------CTGGATCCCGAGGCTGAACTGTCAGGCTTTGCAGCCCTCCTGGTGCTCAGCTATCAGGCTCAC-TACCTCTCAAAGGCCTCTCCTCTCTATGTGGACATT--TCTGTCATAGCTGCAAGGTT-------------------CTGACAATAAGCTTGCTCTCCAAATTCCTAAAAGAATTGGTTGCTCCAGTAGAGCCAGCTAAAACTTTCTTGGATAATGACATAATCTAGAAGGATATTTAACAAATTC--ATTTAAACTGGAAATTATTGACTCTATGG-TGAGTCAGGAAAAATCACATTCAATACACATTCACAATATTTGG-------------------------------CAGCAGCACAGGGTGTTGA-TACTCCAGGGCAGT------GCAGGTATTAGGGATCTGAGA-GGTTTCATGGTGCTTCTCAGGGAGATACACAGGTTCTGGGTTCTTCCAAGGAATTTCCCTTCATGCCAGCCACCACCTTGTCTCTGCTAGGGAAGTAGT-GATCCAGGGAG-CCCC---AACTGTAGGGAAATTATT--TAACCTCCCGATATCACTGCACCTCCTCTGGGTCTTCTTTT---ATCCCTTCTTT-CTCCTAGAAAACACCTTCTGATGCACTCTTGCTCTGCCTGCCTGTCCCCTGCTGTGTCTGGACAGAGATCAGGAAAGAGGTCCAGCATCTGGACTGTTTGCTGGTTTGCAGAATCTGTTCTCTCATAGTATCTGTTTTCCAATGCAGATTTTCACAGTCCCCTAAAGAAGCTTAAAATTACATTCCCAGAATGACTTCATTTCCTGATACCCAGCCAAATTTCACTTGTGTTTGGAGCCGATGTGGTAATAT-ACCACTTGGGTGATGGTGAACATCACAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTTAGGA---CTTAGTGCAACTTTGCA----------------------TGTAGTCCTTGCCACCAACCTCAGGATGTAATTACTTGTGAGAGGCTGCTTCATGCCTGTCTGCTCAATGGATGAGAGACCTTGAGGCCTAGGAAAGTCCTGCTCTCCTTGGCTCGGTATTCCTAGGTCCTAGTGTGTTGCCTGGCGGgatggttaattttaggtgtcaacctgactaggctaagggaaa-tcggatagctgataaaacatgctttctatgtgtgtctgagagggtatttccagaagagatcagcattggaatcagggcactgagttgggaaaacccatgatcccc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 38744 2117 + 376347 gacttctgttcgtcagaccaagaTCATGaatctgtggccaatccattggccaaaatgttcctgttaaaacaggtcggggaatgccagctttctgctccaaacattcaagaa----ctccctgcctccca------------gcggcctgcaagtccccgccagccctg-cctgttccctctcaactccctct---tccatagcgtacggtccagctggatccactggccgccctgctcctggaatgatccacgtgcactcccacttcaggctcttctggttggctcctttcccagtctcggcacgcctggccctcgcctgtctcagggtctgtgcaggtga-cgacctctcgggaaggccttccctggccatacctttgaacttgcttcccgtgttc-acattcccta-acccttttctgctttactttcctgcaaagctgttctcattgccttgcacacggcaagctttaatt---------atctagttgtttactgcctagctcctccctctaaaattttagttctccattgtgtaggacttttCCTGGCACACACTCATCATTCTGGTGTTACGATT----GAGTAACATCAGCAACGCTGTTCTTTCTCTCTGTAACTATGTTTTGAGCTTGTGGCAATCTATAGAAGTTAGTTTAACTGGTCTTACAATCCTGATCTGGAGAAAAGGGGGTGATGAAAAAGACGGACAAGGGGTCATATATCAACATGGCCAAGTGCCGAAACAGCCTCCTCCTTCCACAGATTAGCGGGGAGGAGTCAGAGCAGGCTGCTGTCCACTGACCCACGTGCTTCCTTGGGAGCTCGAGAAGGTGCTGTCCGTGGTGCTG-CCCTGGGTGCTGCTTACCGGGAAACCCATGGCATCTAAGATGCTCCGCTGCTCTGGCTCTGTCCTGGATCCTCCCCGTAGCTCAGATCCAT-GCGAGGCATCCTGAAGGGCATT-GCGCTCTGGCAGGG--GCTCACTGTGGGGAGACAGAGGCTGGG----------CTGGATCCCGAGGCTGGGCTGTCAGGCTTTGCAGCCCTCCTGGTGCTCAGCTCTCAGGCTCA---------------CCTCTCCTCTCTACGTGGACATT--TCTGTCATAGCTGCAAGGTT-------------------CTGACAATAAGCTTGGTCTCCAAATTCCTAAAAGAATTGGTTGCTCCAGT---------------TTTGATGGACAACGACATAATCTAGAAGGATATTCAACAAATTC--ATTTAAACTGGAAATTATTGACTCTATGG-TGAGTCAGGAAAACCCGCATTCAATACACATTCACAGTATTCAG-------------------------------CAGCAGCGCAGGGGGTTGG-TACTCCAGGGCAGT------GCAGGCATTAGGGATCTGAGA-GGTTTCGCGGCACTTCTCAGGGAGACACACAGGTTCTGGGTTCTTCCAAGGAATTTCCCTTCATGCCAGCCACCACCTTGTCTCTGCTAGGGAAGTAGT-GATCCAGGGAGCCCCC---AACTGGAGGAAAATTAGT--CAACCTCCCGACGTCACTGCACCTCCTCTGGGTCTTCTTTT---ATCCCTTCTTT-CCCCTAGAAAACGCCTTCTGATGCACCCCTGCTCTGCCTGCCTGTCCCCTGCTGTGGCTGGACAGAGATCAGGAAAGAGGTCCAGCGTCTAGACTGTTTGCTGGTTTGCAGAATCTGTTCTCTCGCATTATCCGTTTTCCAATGCAAATTTTCATGGTCCCCTAAAGAAGCTTAAAATTACATCCCCAGAATGACTTCATTTCCTGATACCCAGCCCAGTTTCACTTGTGTTTGGAGCCGATGTGGCAATATAACCACTTGGGTGGGGGTGAACATCACAGCCCACAGTTCTGCAGTTCAGATTTGGGTTTATCTTAGGACCCCTTAGTGCAACTTTGCA----------------------TGTAGCCCTTGCCACCAACCTCAGGATGTAATTACTCGTGAGAGGCTGCTTCATGCCTGTCTGCTCAGCGGATGAGAGGCCTTGCGGCCTGGGAAAGTCCTGCCCTCCTTGGCTCGGTATTCCTAGGTCCTAGTGTATTGCCTGGCGGgatggttaattttatgtgtcaacctgactaggctaagggaaa-ccagatagctgataaaacatgctttctaagtgtgtctgagagggtatttccagaagagaccaacattggaatcagggcactgagttgggaaaacccatgctcccc i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2158991 2083 - 8137123 gacttctgttcactagatctaaaAAATGGCTTGGCTGCCAATAAGTTGACCAAAATGGTCTTGTTAAAGCAGATTAGGGGATGTCAGCCATCTGCTCCAAACACCCATGAGTTCTTTGCACATCTCCAA------------CTGCCCTGCAAGACCCTGACTGCCCTGCCCTGCTCCCTCCCTACCGCAACTGCCTCCAGGGCAGGCAGCTC--------T--GTGGCCTTCCTGCTCCTGAGATGATCCAGG-GTGCTC-CGCCTCAGGCTTCCCTGACCAGCTCCTGCTCCAGGCCAAGGT--GCTGGACCcctcctgccccggtctttgcacagatga-cagcttctcaggaaggccttccctgaccacacgtgggaacttgcttcctgtcttctgtgatctctatcctcctttctgctttacttttcttcaaaacccttcacattccctcacatactgcatgttttaatt---------atttagttgtttattgcctgtctgct----cTGAAATGCTCC-TCTCTG-AGTGTGGGACAGCTCCCAGCACACGCTCATAATTACTGTTTCATGACTGGAGGAGTATCGTCAGCAGTGCTGCTCTTTCCCTCAATT------------GCTTATGACAGTCTGCAGAACTAAC-TCACTCGGCCCTACAATCCTGATTTGGAGAAATAGGAGTGAGGATAAGGA---ATGATGCGTCTTATATTAACATGGCCAAGTTTCAGCACTGTCTCC-CTCTCCCTGGGTTACTTGTAAG---TCAGAGGAAGCTGCTGCGCATCAACCTGC-TTCTTCCTGGGAAGTTCGAGAAGTTATTCTCCCTGACTCTGCCCT-GGCTGCCACTCCCGCTTATACCCAT-GCGTCC-AGATGTTCTGCTGCATTGCCTCTGTCTGGGGGCATCACTCGGGCTTGGATCCAC-ATGAGGAAT-CTGTGAGGCACTGGCCCTCGAGCCGGGATGCGCACAGTGGGCAGCAGGAGGCTGGGATGCTCTGCATTGGGTCTAGAGGCTGACCTGCCGTG---GGCAGGCTCTTTGGTGCTCAA----CAGTCTCACTTCCCTCTCAAGGAC--CTCGTCTTGACATTGACATTTCTCCATCACAGCTGCAGGATT-------------------CTGAC-ATAAACCTGTTGTCC----------AAGAATTGTTTGCTCCAGCTTAACCAGCTGAGACTTCGCTCAGTAATGACATCAGCTGGAAGAAAGTTTAACAAGCTCCAGTTTAAACTGGAAATTATTGACTCTACAG-TGAGTCAGGAAACGCCACGTTTAGGACGTATTCACAATATTTAA-------------------------------AAGCATTGTTGGGCCTTCACTGCTCCA--------CAAGAGCAGGGATTAGAGA---GAGAGGGTTTAACGATTCTTCTTAGGGG-ATATAGGGGGTCTGAGGTCTCTGAAGG-ATGTCCCTTTGCCCCAACCATCACCTG----TAAGTGAGAGAATAGC-AACCTAGGAAGGCTTCCCAAACAGAAGGAGAAATACTCAAAACCACCCTATGTTGCCATGTC-CCTTTGGATCTGTTTTTGTGATTGCTTCTTTCCCCCTAGAAAACATCCTCAAACACACTCCT-------TTGTCTGTCGC---TCATGACTGGATAGCTAGCAGGAAAAAAAACAAGTGCCTGGGATATGCCCTGGCTTGTAATATCCAGGCT---------TAGAGTTTTCAATCCAGATTTTCATGGTTTCCTAAAGAAACTCAAAATTACATTCCTGGAATGACCTCATCTACTAATACTCAGCC-AGATTCTTTCCCTTTTGGAGCTGATGTGGCAACACAGCCACTTGGGGAGGGGTGAAAATCATAGCCCATAATCCTGCAGGTCATGTTGGGGTTTATCTTAGTA---CCTAGCGCAACTTT-----TAGCAGAGACATTTTTCTTTTGTTGCACTTGCTACTGACTCCATTATGTAATTATCTGTGTGAGTTTGTTTCTTGTCTG---------------------CTAGCAGGATGGCAAATTGTTGCCCTCCTTAGCTATGCCTTTCCAAGTCCTAGCTCATTGCCTGGtgtgatggttaattttatgtgtcaactgaactgggctatgggatacccagatagctgacaaaatg---tttctaagtatgtctgtgagggtgtttccagaagagattagcatttgaatca-gtgactgagttaagaagacccaccctcccc i otoGar3.GL873611 C 0 I 109 e canFam3.chr6 60970986 5164 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1902123.000000 s hg38.chr7_KI270899v1_alt 62430 292 + 190869 gaag-cctgagggcccagatagaacaaaaaggcagaggaagggtgaattctttccttattctggatctgagacatccatcttctcctgcccccaaacatcagaactcggggttctcaggcctttggactctgggacgtacaccagcaacttc-----cctggttctccagcttg---tagatggca------gcaggacttctcatcctccataatcacatgagccaagtcacatgaaaaatccctgctcatccctctctctgtgtacatcctattggttctgtttctatggagaact----ctaatacaA s gorGor5.CYUI01015914v1 23319 289 - 432965 aaag-gctgagggccca-atagaacaaaaaggcagaggaagggtg-attctttccttattctggatctgagacatccatcttctcctgcccccaaacatcagaactc-gggttctcaggcctttggactccgggacgtacaccagcaacttc-----cctggttctccagcttg---tagatggca------gcaggacttctcatcctccataatcacatgagccaagtcacatgaaaaatccctgctcatccctctctctgtgtacatcctattggttctgtttctatggagaact----ctaatacaA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 87052 292 + 85365473 aaagtgctgagggcccagatagaacaaaaaggcagaggaagggtgaattctttccttattctggatctgagacatccatcttctcctgcccccaaacatcagaactcggggttctcaggccttcagactcccggacgtacaccagcaacttc-----cctggttctccagcttg---t-gatggca------gcaggacttctcatcctctgtaatcacgtgagccaagtcacatgaaaaacccccgctcatgcctctctctgtgtacatcctattggttctgtttctatggagaact----ctaatacaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33927728 290 + 185818997 aaagtgctgagggcccagatagaa-aaaaaggcagaggaagggtcaattctttccttattctggatctgagacgtccatcttctcctgcccccaaacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cccggttctccagcttg---tagatggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33543667 290 + 192294377 aaagtgctgagggcccagatagaa-aaaaaggcagaggaagggtcaattctttccttattctggatctgagacgtccatcttctcctgcccccaaacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cccggttctccagcttg---tagacggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4304974 290 - 9440265 aaagtgctgagggcccagatagaa-aaaaaggcagaggaagggtcaattctttccttattctggatctgagacgtccatcttctcctgcccccaaacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cccggttctccagcttg---tagacggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16894660 293 - 21915920 aaagtgctgagggcccagatagaacaaaaaggcagaggaagggtcaattctttccttattctggatctgagacatccatcttctcctgcccccaaacctcagaactccaggttctcaggcctttggactctgggacgtacaccaggaacttc-----cctggttctccagcttg---tagacggca------gcaggacttctcatcctctgcaaccacagaagccaagtcacatgaaaccccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 34506 290 - 21531802 aaagtgctgaaggcccagatagaacaaaaaggcagagcaagggtcaattctttccttattctggatctgagacatccatcttctcctgccccc-aacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cctggttctccagcttg---tagacggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccctctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 56305 291 - 2515279 aaagtgctgagggcccagatagaacaaaaaggcagaggaagggtcaattctttccttattctggatctgagacatccatcttctcctgcccccaaacctcagaactccaggttctcaggccttcggactctgggacgtacaccaggaacttc-----cctggttctccagcttg---tagacggca------gcaggacttctcatcctctgtaaccacagaagccaagtcacatgaaa--ccccccctcacccctctctctgtgtacatcctatgggttctgtttctatggagaact----ctaatacaA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 214789 291 + 6586416 aaagtgctgagggcccagagaggacaaaaaggcagaggaagggtcaattctttccttattctggatccgagacatccatcttctcctgcccccaaacctcggaactccaggttctcaggccttcggactctgggacgtacaccaggaacgtc-----cctggctctccagcttg---tagacggca------gcaggacttctcgtcctctgtaaccacagaagccaagtcacatgaaa--cccccgctcctccctctctctgtgtacgtccgatgggttctgtttctatggagaact----ctaatacaA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146580731 292 - 204313951 aaagggctgagggcccagatgagacaaaaagtcagaggaaaggtggattctttccttcttcttgatctgagacatccatcatctcctgcccccaaacatcagaactccaagttttcaggcctttggactgtgggacgtacaccagctacttc-----cctggttctctggccta---tagatggca------ccaggacttctcatcctctgtaatcacatgagccaactcacatgaaaaatccccactcattcctccatttccatatatccaat-ggttctatttctatggagaact----ttaatacaa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 417830 292 - 2125214 gaagtactgagggcccagataggacaaaaagtcagaggaaagatgaattctttccttcttcatgatctgagacatccatcttctcctgcccccaaacatcagaactccaagttctcaggccttcgaactctgggacatacaccagctacttc-----cctggttctccagcctg---tagatggca------ccaggagttctcatcctctgtaatcatatgagccaactcacatgaaaaagccccactcattcctccctttctatatatccaat-ggttctatttctatggagaact----ttaatacaA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 40861 288 + 376347 aaagtgctgagggcccagataggacaaaaagtcagaggaaaggtgaattctttccttcttcttgatctgagacatccgtcttctcctgcccccaaacatcagaactccaagttctcaggccttcggactctgga----acaccagctacttc-----cctggttctgcagcctg---tagatggca------ccaggacttctcatcctctgtaatcatatgagccaactcacatgaaaaatccccactcactcctccctttctatatatccgat-ggttctatttccatggagaact----ttaatacaA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2161183 303 - 8137123 -gagaactgctggtctagagagaacaaaagggtaaaggaaga--tgattgtttc--tcttctagatctaggacatccagcttctcctatcctcaaacataagaaccccaggatcttgggtattcaggctctgggccttacaccagtgcttccaggttcttggtttttggccttggactgaaagccacatcatccagggcttcttaccctccctgctcacaggtg---attctcacaataaatcccttctcaactctctctctctgtgtatcctataggttctgtttcactagagaactctgactaatacaA i otoGar3.GL873611 I 109 C 0 e canFam3.chr6 60970986 5164 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=870473.000000 s hg38.chr7_KI270899v1_alt 62722 129 + 190869 ctggcacagactagctgctcaacaag--tgtttt------atttctgaatgact--------gaGATGTTTGAGCAGCTTCCAAGC--TT------ACATA-------CCTG----TGTTTCCATTAAAGCCATTGTTTAGGAGGCCGATGGCAACAAAAGGTT s gorGor5.CYUI01015914v1 23608 129 - 432965 ctggcacagactagctgctcaacaag--tgtttt------atttctgaatgact--------gaGATGTTTGAGTAGCTTCCAAGC--TT------ACATA-------CCTG----TGTTTCCATTAAAGCCATTGTTTAGGAGGCCGATAGCAACAAAAGGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 87344 129 + 85365473 ctggcacagactagctgctcaacgag--tgtttt------atttctgaatgact--------gaGATGTTTGAGTAGCTTCCAGGC--TT------ACACA-------CCTG----TGTTTCCATTGAAGCCATTGTTTAGGAGGCCGATGGCAACAAAAGGTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33928018 128 + 185818997 CTGGCAAAGACTAGC-GTTCAGCAAG--CGTTTT------ATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TG------ACATA-------CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTCGATGGCAACAAAAGGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33543957 128 + 192294377 CTGGCAAAGACTAGC-GTTCAGCAAG--CGTTTT------ATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TG------ACATA-------CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTCGATGGCAACAAAAGGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4305264 128 - 9440265 CTGGCAAAGACTAGT-GTTCAGCAAG--CGTTTT------ATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TG------ACATA-------CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTCGATGGCAACAAAAGGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16894953 128 - 21915920 CTGGCAAAGACTAGC-ATTCAGCAAG--CGTTTT------ATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TG------ACATA-------CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTCGATGGCAACAAAACGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 34796 128 - 21531802 CTGGCAAAGACTAGC-CTTCAGCAAG--TGTTTT------ATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TG------ACATA-------CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTTGATGACAACAAAAGGTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 56596 128 - 2515279 CTGGCAAAGACTAGC-GTTCAGCAAG--CGTTTT------ATTTCTGAATGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TG------ACATA-------CCTG----TGTTTCCATTAAAGCCATTGTTTCGAAGGTTGATGGCAACAAAACGTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 215080 128 + 6586416 CTGGCAAAGACTAGC-GTTCAGCAAG--CGTCTT------ACTTCTGAGTGACT--------GAGATGTTTGAGTGGCTTCCAAGC--TG------ACACA-------CCTG----TGTTTCCATTAGAGCCATTGTTTCGAGGGTCGATAGCAACAACAGGTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146581023 137 - 204313951 ttggtgcagactagctgttcaacaag--tgtttt------atttctgaatgactgaGATGTGGAGATGTGTAAGTAGCTTCCAAGC--TT------ACAAA-------CCTG----TGTGTCTGTTAAAGCCAATGTTCAGGAAGCTGATGACAATAAAATGCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 418122 131 - 2125214 TTGGTGCAGGCTAGCTGTTCAACAAGTTTTTTTT------ATTTCTGAATGACT--------GAGATGTGTGAGTAGCTTCCAAGC--TT------ACAAA-------CCTG----TGTGTCTGTTAAAGCCACTGTTCAGGAAGCCGATGACAATAAAAGGTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 41149 129 + 376347 TTGGCGCAGACTAGCTGTTCAACAAG--TGTTTT------ATTTCTGAATGACT--------GAGATGTGTGAGTAGCTTCCAAGC--TT------ACAAA-------CCTG----TATGCCTGTTAAAGCCACTGTTCAGGAAGCCGATGACAATAAAATGTT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2161486 136 - 8137123 CTGGCACAGAGTAGAATCTCATCTAC--TATTTG------ATTTCTGAATGACT--------GAGAAGTTTGAGTATCATCCCAGCATTT------ACACAG------CCTGGGGCTGGGTCCACTGCAGCTGCTGTTTGGGAGATGGATGGCATTAAAAGCTT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60976150 148 - 77573801 ctggtacaaacaagatgctcaatgag--tatttctgaatgaTTCCTAAATGGCT--------GAGATGTGTGAGCAGCTTCCAAAG--TTTATGTCACAAGGCCTTCTGCTG----TAGTCCCATTAAAGCCACCATTTGGGAGGTAGGAAACAATAAAAAGTT i canFam3.chr6 I 5164 I 1 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=7609243.000000 s hg38.chr7_KI270899v1_alt 62851 1230 + 190869 GAAACATGGCAAAATCAGGGGCAGTTGATTTGAGTTATACCGTGATGTGTTTACATTTG-------------------TACTATGATAGGGATTTATTGCAAGGAGTTAGGAATGCTGGCCTCTAAAAGCTGGAAAAGTGTATT-TTGTTGGGGAGGCCTGGGAGCCCCCATCTCACACACAGGAGGGAAGACACAAGGGGAAGCACTCGTGACGATGAACGAGATGTTGTT-CCtgccagacgcaggtccttgccatgtgtgtgcataa------cctcatttcattcgatagcaactcaggaggaggaaatcattattaactgtattcttttatgtacagaagctgaggctt-gaaagtgaaaatgacacagctg-ttcatggtcTTGCTGGCATTGGAGCC-AGGAGAGAAAAATCCCTTGGTAAAAT-CTCCCAGCTGAATGGGGAAATGGGAATATATCCCGCATGGCCCAAAGAGACCATGG------------CTGGAAGTGGTCACAGTCCTCGAGGGGGAGCTG-TGTGGTGGCCAGGCTGTGGTCATGAAGACACA-GCGGCGTGGGAGGCTGAGGGTCGCTGGGGATGCTGGCTGGAATGTTTCTGTTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGATGGGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCATGAGCACATGTCAGGGTGGAGCTCTGACGTCAGGCCCCTGGCATGACTACAATAGACATCACACAAATGGGGCAAGAGGACCAAG------CCTCCC--CACGGTATAGCTGCTCAACTGTGTGGGGGGAGCTGTGGTGAAACACAGGACTCA----CTTagaaagatccagagag-ataatccacccacagaaaacctggagagcattttgaaacttcctacaggaaatccaggagaaaAGGAGTCCTATTCAG-TGATG-GGAGGGGGGGCA----------------------------------------GGTCAGGGGCCGCATCGG-AAGGCAGTCGTCTGAAGGGATGCACGGATTCACGACGGAGGTGCTGAGACAGCCACAGGA----------------------GATTGGGTGGGGAATCTAGAGCTggga-cactctggttttgatggaaggagcatcgccctaggaagc-aaagacacagattcgagtccaggcctggagcaaac----ttcaatcacccttaagccctctgagtttctgcgtctgtgaaataagcataatgattcccacctca------------------cagggGCAGGGGCAGGGGCAGGACACTGTGAGATTGTAAGGGTTGGTGTCCCTCTTCGCATGGAGTCAGCAGCCGGCTGG s gorGor5.CYUI01015914v1 23737 1244 - 432965 GAAACATGGCAAAATCAGGGGCAGTTGATTTGAGTAATACCATGATGTGTTTACATTTG-------------------TACTGTGATAGGGATTTATTGCAAGGAGTTAGGAATGCTGGCCTCTAAAAGCTGGAAAAGTGTATT-TTGTTGGGGAGGCCTGGGAG-CCCCATCTCACACACAGGAGGGAAGACACAAGGGGAAGCACTCGTGACGATGAACGAGATGTTGTT-CCtgccagacgcaggtccttgccgtgtgtgtgcataa------cctcatttcattcgatagcaactcaggaggaggaaatcattattaactgtattcttttatgtacagaagctgaggctt-gaaagtgaaaatgacacagctg-ttcatggtcTTGCTGGCATTGGAGCC-AGGAGAGAAAAATCCCTTGGTAAAAT-CTCCCAGCTGAATAGGGAAATGGGAATATATCCCGCATGGCCCAAAGAGACAATGG------------CTGGAAGTGGTCACAGTCCT-GAGGGGGAGCTG-TGTGGTGGCCAGGCTGTGGTCATGAAGACACA-GCGGCGTGGGAGGCTGAGGGTCGCTGGGGATGCTGGCTGGAATGTTTCTGTTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGATGGGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCATGAGCACATGTCAGGGTGGAGCTCTGATGTCAGGACCCTGGCATGACTACAATAGACATCACACAAATGGGGCAAGAGGACCAAG------CCTCCC--CACGGTACAGCTGCTCAAC--TGTGGGGGGAGCTGTGGTGAAACACAGGACTCA----CTTagaaagatccagagag-agaatccacccacagaaaacctggagagcattttgaaacttcctacaggaaatccaggagaaaAGGAGTCCTATTCAG-TGATG-GGA-GGGGTGCA----------------------------------------GGTCAGGGGCCGCATCGG-AAGGCAGTCGTCTGAAGGGATGCACGGATTCACGACAGAGGTGCTGAGGCAGCCACAGGAGGTGGTGAGTGGGGGCCACGGGGATTGGGTGAGG-ATCTAGAGCTggga-cactctggttttgatggaaggagcatcgccttaggaggc-aaag--acagattcaagtccaggcctggagcaacc----ttcaatcacccttaagccctctgagtttctgtgtctgtgaaataagcataatgattcccacctca------------------cagggGCAGGGGCAGGGGCAGGACACTGTGAGATTGTAAGGGTCGGTGTCCCTCTTCGCATGGAGTCAGCAGCCGGCTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 87473 1252 + 85365473 GAAACGTGGCTTAATCAGGGGTTGTTGATTTGAGTTATACCACGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTATTGCAAGAAGTTAGGAATGCCGGCCTCTAAAAGCTGGAAAAGTGTATT-TTGTTGGGGAGGCCTGGCAGCCCCCGTCTCACACACAGGAGGGACGACAC-AGGGGAGGCGTTCGTGACGATGAACGAGA---TGTT-CCtgccagacgcaggtccccgccttgtgtgtgcataacctcatcctcatttcagtcgacagcaactcaggaggaggacatcgttattaactgtattctttcatgtacagaagctgaggctt-gaacgtgaaaatgacacagctg-ttaatggtcttgctggcattggagcc-AGGAGAGAAAACTCCCTTGGTAAAGT-CTCCCAGCTGAATGGGGAAATGGGAATACATCCCGCATGGCCCAAAGAGACAATGG------------CTGGACGTGGTCACAGTCCTCGAGGGGGAGCTG-TGTGGTGGCTCAGCTGTGGCCATGAAGACACA-GCGGCCT-GGAGGCTGGGGGTCGCTGGGGATGCTGGCTGGAATGTTTCTGCTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGACGGGGGCCTGGTCCTGGGAGGGTTCGTAAACCGGCATCGGCACATGTCA-GGTGGAGCTCTGACGTGGGGACCCTGGCGTGACTCCAACAGACATCACACGAATGGGGCAAGGGGACCAAG------CCTCCC--CGCGGTACAGCTGCTCAACCATGTGGGGGGAGCTGTGGTGAAACACAGGACTCG----CTTAGAAAGATCCCGAGGG-AGAATCCacccacggaaaacctggagagtgttttgaaacttcctacaggaaacctaggagaaaAGGGGTCCTACCGAG-TCATG-GGAGGGGGTGCA----------------------------------------GGTCAGGGGCCGCATCGG-AAGGCAGTCGTCTGAAGGGATGCACGGATTCACGATGGAGGTGCTGAGGCAGCCACAGGAGGTGGTGGGTGGGGGCCGTGGGGATCGGGTCAGGAATCTAGAGCTGGGA-CACTCCGGTTTTGAtggaaggagcatcgccttaggaggc-aaagacacagattcgagtccaggcctggagcaccc----ttcaatcacccttaagccctgtgagtttctgcgtctgtgaaatgagcataatgattcccacctca------------------cagggGCAGGGGCAGGGGCAGGACGCTGTGAGATTGTAAGGGTGGGTGTACCTCGTCGCATGGAGTCAGCAGCCGGCTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33928146 1248 + 185818997 GAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCCGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGTCTGG-AGCTCCCATCTCACACGCAGGAGGGAAGACACAACTGGAAGCAATCAAGCTGACGAACGAGATGTTGTT-CCTGCCAGACGCAGGTCCTTGCCTTGTGTGTGCCTAA------CCTCACTTCGTTCGACAGCAACACAGGAGGAGGAAATCACCATTAACCGTGCTCTTTTATGTGCAGAAGCTGAGGCTTGGAAACTGAAAATGACACAGCTG-TGAACGGTCTTGCTGGCATTGGAGCC-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAGCTGAATGGGGAAATGGGAATACACCCTGCAGGGCCCACAGAGACAATGG------------CTGGAAAC-GTCACAGTCCTCGAGGGGGAGCTG-TGCGGTGGCCGGGCTGTGGCCGTGAAGACACA-GTGGTGTGGGAGGCTGGGGGCCGCTGGGGAT-CTGGCTGGAAGGTTTCCGTTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGACCTGGTCCTGGGAGGGTTTGTAAACCGGCAAGAGCAC--GTCAGTGTAGAGCTCTGACGTCAGGACCCTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCCACCATGGTGCAGCTGCTCCACTGTGTCAGGGGAGCTGTGGTGAAACACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacccgcagaaaacctggagagtattctgaaacttcctacaggaaatccaggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTACT----------------------------------------GGTCAGGGGCTGCGTCGGAAAGGCAGTCGTTGGAAAGGATGTACGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGGAGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGGA-C-CCCTGGATTTGAtggaaggagcattgccttgggaggtaaaagatacagatttgagtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaatgagcataacggttcccaccaca------------------cagagGCAGGGGCAGGGGCAGGACGCTGTGAGATTGTGAGGGCTGGAGTCCCTCATTGCGTGGAGTCAGCAGCCAGCTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33544085 1246 + 192294377 GAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCCGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGTCTGG-AGCTCCCATCTCACACGCAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCTGCCAGACGCAGGTCCTTGCCTTGTGTGTGCCTAA------CCTCACTTCGTTCGACAGCAACACAGGAGGAGGAAATCACCATTAACCGTGCTCTTTTATGTGCAGAAGCTGAGGCTTGGAAACTGAAAATGACACAGCTG-TGAACGGTGTTGCTGGCATTGGAGCC-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAGCTGAATGGGGAAATGGGAATACACCCTGCAGGGCCCACAGAGACAATGG------------CTGGAAAC-GTCACAGTCCTCGAGGGGGAGCTG-TGCGGTGGCCGGGCTGTGGCCGTGAAGACACA-GTGGTGTGGGAGGCTGGGGGCCGCTGGGGAT-CTGGCTGGAAGGTTTCCGTTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCAAGAGCAC--GTCAGTGTGGAGCTCTGACGTCAGGACCCTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCCG-CATGGTGCAGCTGCTCCACTGTGTCGGGGGAGCTGTGGTGAAACACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacctgcagaaaacctggagagtattctgaaacttcctacaggaaatccaggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTACT----------------------------------------GGTCAGGGGCTGCGTCGGAAAGGCAGTCGTTGGAAAGGATGTACGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGGAGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGGA-C-CCCTGGATTTGAtggaaggagcgttgccttgggaggtaaaagatacagattcgggtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaa-gagcataacggttcccaccaca------------------cagggGCAGGGGCAGGGGCAGGACGCTGTGAGATTGTGAGGGCTGGAGTCCCTCATTGCATGGAGTCAGCAGCCAGCTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4305392 1252 - 9440265 GAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCCGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGTCTGG-AGCTCCCATCTCACACGCAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCtgccagacgcaggtccttgccttgtgtgtgcctaa------cctcacttcgttcgacagcaacacaggaggaggaaatcaccattaaccgtgctcttttatgtgcagaagctgaggcttggaaactgaaaatgacacagctg-tgaacggtcttgctggcattggagcc-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAGCTGAATGGGGAAATGGGAATACACCCTGCAGGGCCCACAGAGACAATGG------------CTGGAAAC-GTCACAGTCCTCGAGGGGGAGCTG-TGCGGTGGCCGGGCTGTGGCCGTGAAGACACA-GTGGTGTGGGAGGCTGGGGGCCGCTGGGGAT-CTGGCTGGAAGGTTTCCATTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCAAGAGCAC--GTCAGTGTGGAGCTCTGACGTCAGGACCCTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCC--CATGGTGCAGCTGCTCCACTGTGTCGGGGGAGCTGTGGTGAAACACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCACCTGCAGAAAACCTGGAGAGTATTCTGAAACTTCCTACAGGAAATCCAGGAGAAA--GAGTCCTATTCTG-TGATG-GGAGGGGGTACT----------------------------------------GGTCAGGGGCTGCGTCGGAAAGGCAGTCGTTGGAAAGGATGTACGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGGAGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGGA-C-CCCTGGATTTGAtggaaggagcgttgccttgggaggtaaaagatacagattcgggtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaatgagcataacggttcccaccaca------------caggggcaggggcaggggcaggggcaggacgctgtgagattgtgagggctggaGTCCCTCATTGCATGGAGTCAGCAGCCAGCTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16895081 1249 - 21915920 GAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCTGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGCCTGG-AGCTCCCATCTCACACACAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCtgccagacgcaggtccttgccttgtgtgtgcctaa------cctcacttcgttcgacagcaacgc---aggaggaaatcaccattaacagtgctcttctatgtgcagaagctgaggcttggaaactgaaaatgacacagctg-tgaacggtcttgctgacattggagcc-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAACTGAATGGGGAAATGGGAATACACCCTGCAGGGCCCACAGAGACAATGG------------CTGGAAAC-GTCACAGTCCTTGAGGGGGAGCTG-TGCGGTGGCCGGGCTGTGGCCGTGAAGACACA-GTGGTGTGGGAGGCTGGGGGCCGCTGGGGAT-CTGGCTGGAAGGTTTCCGTTAATAGCTGAAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCAAGAGCAC--GTCAGTGTGGAGCTCTGACGTCAGGACCCTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCC--CATGGTGCAGCTGCTCCACTGTGTGGGGGGAGCTGTGGTGAAACACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacccgcagaaaacctggagagtattctgaaacttcctacaggaaatccaggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTACT----------------------------------------GGTCAGGGGCTGCGTTGGAAAGGCAGTCATTGGAAAGGATGTACGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGGAGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGGA-C-CCCTGGATTTGAtggaaggagcgttgccttgggaggtaaaagatacagattcgagtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaatgagcataacggttcccaccaca------------caggggcaggggcaggggcaggggcaggacgctgtgagattgtgagggctggaGTCCCTCATTGCATGGAGTCAGCAGCCGGCTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 34924 1245 - 21531802 GAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGAGATTTGTTGCAAGAAGTTAGGAATGCCGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGCCTGG-AGCTCCCATCTCACACACAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCTGCCAGACGCAGATCCTTGCCTTGTGTGTGCCTAA------CCTCACTTCATTCGACAGCAACGCAGGAGGAGGAAATCACCATTAACCGTGCTCTTTTATGTGCAGAAGCTGAGGCTTGGAAACTGAAAATGACACAGCTG-TGAACGGTCTTGCTGGCATTGGAGCC-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAACTGAATGGGGAGATGGGAATACACCCTGCAGGGCCCACAGAGACAATGG------------CTGGAAAC-GTCACAGTCCTCGAGGGGGAGCTG-TGTGGTGGCCAGGCTGTGGCCGTGAAGACATA-GTGGTGTGGGAGGCTGGGGGCCGCTGGGGAT-CTGGCTGGAAGGTTTCCGTTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGTGGGCCTGGTCCTGGGAGGGTTTGTAAACTGGCAAGAGTAC--GTCAGTGTGGAGCTCCGACGTCAGGACCCTGG-ATGCCTACAACAGACATCACACGAATGGGGCAAGAAGACCAAG------CCCCCC--CATGGTGCAGCTGCTCCACTGTGTGGGGGGAGCTGTGGTGAAACACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacccacagaaaacctggagagtattctgaaacttcctacaggaaatccaggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTACT----------------------------------------GGTCAGGGGCTGCGTCGGAAAAGCAGTTGTTGGAAAGGATGCACGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGGAGGTGGTGGGTGGGGGCACTGGGGATTGGGTGGGGAATCTAGAGCTGGGA-C-CCCTGGTTTTGACggaaggagtgttgccttgggaggt-aaagacacagattcgagtccaggcctgtagcatcc----ttcagtcgcccttaagccctctgagtctctgcgtctgtgaaatgagcataccggttgccaccaca------------------cagggGCAGGGGCAGGGGCAGGACGCTGTGAGATTGTGAGGGCTGGAGTCCCTCATCGCATGGAGTCAGCAGCCGGCTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 56724 1252 - 2515279 GAAACATGGCATAATCCGGGGTTGTTGATTTGAATTGTACCATGATGTGTTTAAATTTG-------------------TACTATGATAGGGATTTGTTGCAAGAAGTTAGGAATGCTGGCATCTAAAAGCTGGAAAAGCGTATT-TTGTTGGGGAGGCCTGG-AGCTCCCATCTCACACACAGGAGGGAAGACACAACTGGAAGCAATCAAGCCGACGAACGAGATGTTGTT-CCTGCCAGACGCAGGTCCTTGCCTTGTGTGTGCCTAA------CCTCACTTCGTTCGATAGCAACGCAGGAGGAGGAAATCACCATTAACCGTGCTCTTTTATGTGCAGAAGCTGAGGCTTGGAAACTGAAAATGACACAGCTG-TGAACGGTCTTGCTGGCATTGGAGCC-AGGAGAGAAAATGCCCTTGGTAAAAT-CTCCCAACTGAATGGGGAAATGGGAATACACCCTGCAGGGCCCACAGAGACAATGG------------CTGGAAAC-GTCACAGTCCTCGAGGGGGAGCTG-TGCGGTGGCCGGGCTGTGGCCGTGAAGACACA-GTGGTGTGGGAGGCTGGGGGCCGCTGGGGAT-CTGGCTGAAAGGTTTCCGTTAATAGCTGGAGCTCCAGAGCCTGTCCTGGAAGAGGGAAGCGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCAAGAGCAC--GTCAGTGTGGAGCTCTGACGTCAGGACCCTGG-ATGCCTACAACAGAGATCACACGAATGGGGCAAGAAGACCAAG------CCCCCC--CGTGGTGCAGCTGCTCCACTGTGTGGGGGGAGCTGTGGTGAAACACAGGACTCG----CTTAGAAAGATCCCGAGAG-AGAATCCacccgcagaaaacctggagagtattctgaaacttcctacaggaaatccaggagaaa--GAGTCCTATTCTG-TGATG-GGAGGGGGTACT----------------------------------------GGTCAGGGGCTGCGTCGGAAAGGCAGTCGTTGGAAACGATGTACGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGGAGGTGGTGGGTGGGGGCCTTGGGGATTGGGTGGGGAATCTAGAGCTGGGA-C-CCCTGGATTTGAtggaaggagcattgccttgggaggtaaaagatacagattcgagtccaggcctgtagcatcc----ttcagtcacccttaagtcctctgagtttctgtgtctgtgaaatgagcataacggttcccaccaca------------caggggcaggggcaggggcaggggcaggacgctgtgagattgtgaggGCTGGAGTCCCTCATTGCATGGAGTCAGCAGCCGGCTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 215208 1280 + 6586416 GAAACACGGCATAATCTGGGGTTGTTGATTTGAATTGTGCCATGACGTGTTTAAATGTGTACTACGATTAAACTACGATACTACGATAGGGATTTATTGCAAGAAGTGAGGAATGCTGGCATCTAGAAGCTGGAAAAGCATATT-TTGTTGGGGGGGCCTGG-AGCTCCCATCTCACACACAGGAGGGAAGACACAACTGGAAACAATCAAGCCGACGAACGGGATGTTGTTCCCtgccagaggcaggtccttgccttgtgtgtgcctaa------cctcacttcgttcaacagcaacacaggaggaggaaatcaccgttaaccgcgctcttttacgtgcagaagctgaggctcagaaactgagaatgacacagctg-tgaacggtctcgctggcattggagcc-AGGAGACAAAATGCCCTTGGTAAAAT-CTCTCAACGGAA-GGGGAAATGGGAATGCACCCTGCAGGGCCCACAGAGACAATGG------------CTGG-AAC-GTCACGGTCCTCGA-GGGGAGCGG-TGCGGTGGCCGGGCTGTGGCCGTGAAGACACA-GCAGTGTGGGAGGCTGGGGGCTGCTGGGGAT-CTGGCTGGAAGGTTTCCGTTAATAGCTGGAGCTCCAGAGCCGGTCCTGGAAGAGGGAAGTGGGCCCGGTCCTGGGAGGGTTTGTAAACCGGCAAGAGTGC--GTCAGCGTGGGGCTCCGACGTCAGGACCCTGGCATGCGTACAACAGACCTCACACGAATGGGGCAAGAGGACCAAG------CCCTGC--CATGGTGCAGCTGCTCCGCCGTGTGGGGGGAACTGTGGTGAAACACAGGACTCG----CTTAGAAAGATCCCAAGAG-AGAATCCGCCCACAGAAAACCTGGGGAGTATTCTGAAACTTTCTGCAGGAAATCCAGGAGAAA--GAGTCCTATTCTG-TGATG-GGAGGGGG-GCT----------------------------------------GCTCAGGGGCTGCGTCGGAAAGGCAGTC-TTGGAAAGGATGCACGGATTCTCGCTGGAGGTGCTGAGGCAGCCACAGGAGGTGGTGGGTGGGGGCCATGGGGATTGGGTGGAGAATCTAGAGCTGGGATC-CCCTGGATTTGAtggaaggagcgtcgccttgggaggc-aaagacacagattcgagtccaggcctgtagcatcc----ttcagtcacccttaagcctcctgagtttctgtgtctgtgaaatgagcatcacggttcccacctcacaggggcaggggcaggggcaggggcaggggcaggggcaagacgctgtgagATTGTGAGGGCTGGAGTCCCTCATCGCATGGAGTCAGCAGCAGGCTGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146581160 1232 - 204313951 GAAACGTGGCATAAGGAGGGGCTGTGGATTTGAGTTATACCATGATGTGTTTAAATTTG-------------------TACTGTGTTAGGGATTTATGGCAAGAAGTTAGGAATGCTGGCCTCTGAAAGCTGGAGAAGTGTATT-TTGTTGGGGAGGCCTGGGAGCCCCCATCTCACATA----------------ATCAGAAGGAATTATGACAATGGATGAGATATTCCT-CCTGCCAGATGCAGGTCCTTTCCTTGTGTGtgcataa------cctcatttcatccgatagcaactcaggaggaggaaatcatgattaaccttatccttttatgcacagaagctgaggcttggaaagtgaaaatgacacagcta-ttaactgtcttgctggcattggagcc-AGGAGAGAAAACTCTCTTGGCAAAAT-CTCCCAATTAAATGAGGAGATGGAGATATATCCTGTATGGCCCAAAGAGACAATGG------------CTGGAAACAGTCACAGTCCTCGA-GGGGAGTTA-TGTGGTGGCCGGGCTGTGGCTGTGAAGACACA-GCAGCATGGGAGGCTGGGAGTCGCAGAGGATTCTTGCCGGAAGGTTTCCATTAATAGCTGGAGCTCCTGAGCCTGTCCTGGAAGAGAGAAGTGGGCCTGGTCCTGGGTGGGTTTGTAAATGGGCTTGAGCACA--TCACTGTGAAGCTCTGAGGTCAGGACCCCAGCATGCCCACAATAGACATGACACAAATGGGGCAGGAGGACCAAG------TCCCCC--CACCATGCAGCTGCTCAGCTGTGTGGGGGTAGCTGTGGTGAAACATAGAACTCA----CTTAGAAAGATCCCAagagaataatccacccacagaaaacctggagagtattttgaaacttcctacaggaaatccaggagaaaAGGAGTCCTCTCCAG-TGATG-GGAGGTGGTGCA----------------------------------------GGTTGGGGGCTGCATCAGAAAAGCGGTCAATGGAAGGGATGCACGGATTCTCGCTGGAGGTGCAGAGGCAGCCACAGAAGGTGGTGGGTGGAGGCCTTGGGGATTTAGT-GGGAATCTACAGCTGGAA-TGCTCTGGTTTTGAtggaaggagcatcgccttaggaagc-aaagatacagattcaagtccaggcctgtagcatccttcattcaaccacccttaagccctctgagtttctgtgtctgtgaagtgagcatattgattcccacctca------------------cagtgtCA-------GGGCAAGACACTGTGAGATTGTGAGGGTCTGTGTCCCTCACTGCATGGAGTCAGCAGCTGGCTGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 418253 1230 - 2125214 GAAACGTGGCATAAGCAGGGGCTGTGGATTTGAGTTATACCATGATGTGTTTAAATTTG-------------------TACTGTGATAGGGATTTATGGCAAGAAGTTAGGAATGCCAGCCTCTGAAAGCTGGAGAAGTGTATT-TTGTTGGGGAGGCCTGGGAGCCCCCATCTCACATA----------------ATCGGAAGTGAGCATGACAATGAATGAGATATTCCT-CCTGCCAGATGCAGGTCCTTGCCTTGTGTGTGCATAA------CCTCATTTCATCCAATAACGACTCAGGAGGAGGAAATAATGATTAACTTTATTCTTTTATGCACAGAAGCTGAGGCTTGGGAAGTGAAAATGACACAGCTA-TTAATGGTCTTGCTGGCAATGGAGCA-AGGAGAGAAAACTCTCTTGGCAAAAT-CTCCCAATTAAATGGGGAGATGGAGATATATCCTGTATGGCCCAAAGAGACAATGG------------CTGGAAATGGTCACAGTCCTCGA-GGGGAGCTA-TGTGGTGACCGGGCTGTGGCTGTGAAGACACG-GCAATGTGGGAGGCTGGGAGTTGCAGAGGCTGCTGGCCAGAATGCTTCCGTTAATAGCTGGAGATCCTGGGCCTGTCCTGGAAGAGAGAAGTGGGCCTGGTCCTGGGAGGGTTTGTAAACCGGCTTGAGCACATGTCAGTGTGGAGCTCTGAGATCAGGACCCCAGCATGCCCACAATAGACATCACACAAATGGGGCAGGAGGACCAAG-------CCCCC--CACCGTGCAGCTGCTCAGCTGTGTAGGGGTAGCTGTGGTGAAACACAGAACTCA----CTTAGAAAGATCCCAAGAGGATAATCCacccacagaaaacctggagagtattttgaaacttcctacaggaaatccaggagaaaAGGAGTCCTCTCCAG-TGATG-GGAGGTGGTGCA----------------------------------------GGTCGGGGGCTGCATCAGAAAGGCGGTTGATGGAAAGGATGCACGGATTCTCACTGGAGGTGGAGAGGCAGCCACGGAAGGTGGTGGATGGGGGCCTTGGGGATTGAGTGGGGGATCTACAGCTGGGA-TGCTCTGGTTTTGAtggaaggagcatcaccttaggaagc-aaagacacacattcgagtccatgcctgtagcatcc----ttcaatcacccttaagccctctgagtttctgtgtctgtgaaatgagcataatgattcccacctca------------------cagggGCA-------GGGCAGGACACTGTGAGATTGTGAGGGTCTGTGTCCCTCATTGCATGGAGTCAGCAGCCGGCTGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 41278 1186 + 376347 GAAACGTGGCATAAGCAGGGTCTGTGGATTTGAGTTATACCATGATGTGTTTACATTTG-------------------TACCATGATAGGGATTTATGGCAAGAAGTTAGGAATGCTGGCCTCTGAAATCTGGAGAAGTGTGTT-TTGTTGGGGAGGCCTGGGAGCCCACATCTCACATA----------------ATTGGAAGGAATCATGACAACGAATGAGATATTCCT-CCtgccagatgcaggtccttgccttgtgtgtgcataa------cctcatttcatccgacagtgactcaggacgaggaaatcatgattaaccttattc-tttatgcacagaagctcaggctcggaaagtgaaaatgacacagcta-ttaacggtcccgctggcattggagcc-aagagagAAAACTCGCTTGGCAAGAT-CTCCCGATTAAATGGGGATATGGAGATGTATCCTGTATGGCCCAAAGAGACAATGG------------------------------------------------------CCGGGCTGTGGCTATGAAGAC----GCAGCGTGGGAGGCTGGGAGTCGCAGAGGATGCTGGCCGGAAGATTTCCATTAATAGCTGGAGCTCCTGAGCCTGTCCTGGAAGAAGGAAGTGGGCCTGGTCCTGCGAGGGTTTGTAAACCAGCTTGAGCACATGTCAGTGCGGAGCTCTGAGGTCGGGACCCCAGCATGCTCACGATAGACATCACACAAATGGGGCAGGAGGACCAAG-------CCCCC--TACCGTGCCGCTGCTCAGCTATGTGGGGGTAGCTGTGGTGAAACACAGAACTCG----CTTAGAAAGATCCCAAGAGGATAATCCacccacagaaaacctggagagtattttgaaacttcctacaggaaatccaggagaaaAGGAGTCCTCTCCAG-TGATG-GGAGGTGGTGCA----------------------------------------GGTCGGGGGCTGCATCAGAAAGGCGGTCGATGGAAGGGATGCGCAGATTCTCGCTGGAGGTGCAGAGGCAGCCACGGAAGGTGGTGGGTGGGGGCCTTGGGGATTGAGTGGGGGACCTACAGCTGGGA-TGCTCCGGTTTTGACggaagtagcatcgccttaggaagc-aaagacagagattcgagtccaggcctgtagcatcc----ttcaaccacccttaagccctctgagttcctgtgtctgtgaagtgagcataatgattcccacctca------------------cagggGGA-------GGGCAGGACACCGTGAGATTGTGAGGGTCTGTGTCCCTCATTGCATGGAGTCAGCAGCCAGCTGG i aotNan1.NW_018514293v1 C 0 I 35 s otoGar3.GL873611 2161622 1106 - 8137123 GCAGCATGGC--GATCAAGGGTTATTGATTTCAGTTATGCCATGATGTATTTGAATTTA-------------------TACTATGATAGAGGTTCATTGCAAGTAGTTAGGAATTTCATCCTCTAAGAGCTGAGAAAATGTATTGTTGGTGAGGGGATATGG-GGGCCCTACCTCACACACAGGAGGGAAGACACAAGTGGAAACCATTGTGATGATGGAAGAAGTGTGTTT-CCAGGCAGACAAAGGCCCagagcttgtgtgtgcatga------tctcatcttatctaatggcagcccaggaggtagggatcattattaacttcattcttttacacaaagaagctgaggtttggaaagttaaaatgaTGTAGCTATTTAAGGACCTTGCTGGCTTTGGGACCTAGGTGAGAAAACTCTTTAGATGATATCCCCCCAGTTAAATGGGGAAATAAGGGTACCTCCTACA-GGTCAAAAGAGATAATGGACCAGAACATGGCCGGACACAGTCACAGCCCTTGAGGGGAGACTGCTGCAGAGGCCAGGCTGCCATCACATAGACCCAGGTGGTGT-------------------------CT------------------------------CTTGGACCCTGTTCTGAAAAGGGGAAGTGGGACTGG----------------------------ACACCTGCCA-TGTGGAGCTCC-ACACCAGGGCCCTGGCATGCCTACCACAGGTGTCACATGAATGGGAAAATGAAACCCAGCTCCCCCCCCCC--CATGGGGTGGCTGCTC--------------AGCTGTGCTGAAACTCAGGACACAGGATCTTAGAAAAAGCCTGAAGGGAACATCCAC---CACAGAACTGGAAGAATATTTTGAAAATTCTGATAGGAAATCCGAGGAAAACCAGGTCCTATCCAGCTGATGTGGACAGGGTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTAGTTGAGGGGCTGAATGAAGAA------------------------------------------------AGCTACAGGGGATGGTGGGTTGGGGCT------------------------AGGTGGGA-GAATCTGGTGTTGGTGGAAAGAATACCAACCTGAGAGCC-AGAGAGAT-GGTTCAGGTTCAGCCCTGTGGC-TCc----ttc--------------------agtttctgtgtccgtgaaaggagtgcagtgattcctgcctca------------------cagggtcgGGTT---------GACACTG-GAAAACACCTGGATTTGTGGGCACCATT--------CTGGTAGCCGCCCA- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60976298 1 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=115775.000000 s hg38.chr7_KI270899v1_alt 64081 18 + 190869 GCTGAGGGAGGTGTTTCT s gorGor5.CYUI01015914v1 24981 18 - 432965 GCTGAGGGAGGTGTTTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 88725 18 + 85365473 GCTGGGGGAGGTGTTTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929394 18 + 185818997 GCTGAGGGAGGTGTTTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545331 18 + 192294377 GCTGAGGGAGGTGTTTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4306644 18 - 9440265 GCTGAGGGAGGTGTTTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896330 18 - 21915920 GCTGAGGGAGGTGTTTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36169 18 - 21531802 GCTGAGGGAGGTGTTTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 57976 18 - 2515279 GCTGAGGGAGGTGTTTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216488 18 + 6586416 GCTGAGGGAGGTGTTTCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146582392 18 - 204313951 GCTGAGGGAGGGATTTCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 419483 18 - 2125214 GCTGAGGGAGGGGTTTCT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2162728 18 - 8137123 GCCCAACAAGGTGTCTCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60976298 1 - 77573801 I e aotNan1.NW_018514293v1 42464 35 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=24365.000000 s hg38.chr7_KI270899v1_alt 64099 4 + 190869 GTCC s gorGor5.CYUI01015914v1 24999 4 - 432965 GTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 88743 4 + 85365473 GTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929412 4 + 185818997 GTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545349 4 + 192294377 GTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4306662 4 - 9440265 GTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896348 4 - 21915920 GTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36187 4 - 21531802 GTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 57994 4 - 2515279 GTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216506 4 + 6586416 GTCC i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 419501 4 - 2125214 GTCC i cebCap1.NW_016107703v1 C 0 I 9 s otoGar3.GL873611 2162746 4 - 8137123 GTCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60976298 1 - 77573801 I e aotNan1.NW_018514293v1 42464 35 + 376347 I e calJac3.chr2 146582410 0 - 204313951 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=723976.000000 s hg38.chr7_KI270899v1_alt 64103 168 + 190869 TTAGGTG--------------TCGCAGGCTGGCTCTCGTGCGTCCTTCCTTCCACTTCTCCCCACCTGCATCCACACAGAGaatacactacctccataaaacgcttgcaaggggccactgttctcagcatttcacctgtcaacctcacttaagccttaaa--cagcctatgatgag----gttctgat s gorGor5.CYUI01015914v1 25003 168 - 432965 TTAGGTG--------------TCGCAGGCTGGCTCTCGTGCGTCCTTCCTTCCACTTCTCCCCACCTGCATCCACACAGAGaatacactacctctataaaacgcttgcaaggggccactgttctcagcatttcacctgtcaacctcacttaagccttaaa--cagcctatgatgag----gttctgat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 88747 168 + 85365473 TTAGGTG--------------TCACAGGCTGGCTCTCATGCGTCCTTCCTTCCACTTCTCCCCACCTGCATCCACACAGAGAATGCACTacctctatcgaatgcttgcaaggggccactgttctcagcatttcacctgtcaacctcacgtaagccttaaa--cggcctgtgatgag----gctctgat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929416 168 + 185818997 TTTGGTG--------------TCACAGGCTGACTCTCGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacacgacctctattgaatgcttgcaaggggccactgttcccagcatttcacctgtcaacgtcacttaagccttaaa--cagcctatgatgag----gttctgat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545353 168 + 192294377 TTTGGTG--------------TCACAGGCTGACTCTCGTGCATCCTTCCTTCTGCTTCTCCCCACCTGCATCCACACAGAGaatacacgacctctattgaatgcttgcaaggggccactgttcccagcatttcacctgtcaacgtcacttaagccttaaa--cagcctatgatgag----gttctgat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4306666 168 - 9440265 TTTGGTC--------------ACACAGGCTGACTCTCGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacacgacctctattgaatgcttgcaaggggccactgttcccagcatttcacctgtcaacgtcacttaagccttaaa--cagcctatgatgag----gttctgat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896352 168 - 21915920 TTTGGTG--------------TCACAGGCTGGCTCTCGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacacgacctctattgaatgcttgcaaggggccactgttcccagcatttcgcctgtcaacgtcacttaagccttaaa--cagtctatgatgag----gttctgat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36191 168 - 21531802 TTTGGTG--------------TCACAGGCTGGCTCTTGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacatgacctctatcgaatgcttgcaaggggccactgttcccagcatttcacctgtcaacgtcacttaagccttaaa--cagcctatgatgag----gttctgat i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 57998 168 - 2515279 TTTGGTG--------------TCACAGGCTGGCTCTCGTGCATCCTTCCTTCCGCTTCTCCCCACCTGCATCCACACAGAGaatacacgacctctattgaatgcttgcaaggggccactgtttccagcatttcgcctgtcaacgtcacttaagccttaaa--cagcctatgatgag----gttctgat i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216510 168 + 6586416 TTCGGTG--------------TCACAGGCTGGCTCTTGTGCGTCCTTCCTTCGGCTTCTCCCCACCGGCATCCACGCAGAGaatacacgacctctatcgaatgcttgcaaggggcccctgttcccagcatttcacctgtcaatgtcacttaagccttaaa--cagcctctgatgag----gttctgat i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2162750 187 - 8137123 -TTAGAGTCTGCAATGACAGTTCACAGGCTGGTTCGTGTGCACCCTTCTTTCCATCTCTCCTCACATTCATCCTCAAAAAGACTTCACTGcatttactgaacacttgccaggcaacacagttctcaacacttcacctggaaatctcatttaagccttaaaacaaccctatgatgagggtTGTTCCGAT i otoGar3.GL873611 C 0 I 4 e canFam3.chr6 60976298 1 - 77573801 I e aotNan1.NW_018514293v1 42464 35 + 376347 I e cebCap1.NW_016107703v1 419505 9 - 2125214 I e calJac3.chr2 146582410 0 - 204313951 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=724528.000000 s hg38.chr7_KI270899v1_alt 64271 196 + 190869 actgtctcccttGGCCTGCTGGAAGGCCCAGTGCTGAAGGACAACTGGGCACCCCGGCTCTTGGTATGGTCAAAGGCTCTCACCTGGACAGGGAGGACCCCCTCCTCTCCCTGGGCCTTCTGCTGCCCTGAGCCCCTACTGCTCTCTGCCACGGACTCGGGAGGGAGCATGAGCTGCATCCAACAGGCCGCAGCAG s gorGor5.CYUI01015914v1 25171 195 - 432965 agtgtctcccttGGCCCGCTGGAAGGCCCAGTGCTGAAGGA-GACTGGGCACCCCGGCTCTTGGGATGGTCAAAGGCTCTCACCTGGACAGGGAGGACCCCCTCCTCTCCCTGGGCCTTCTGCTGCCCTGAGCCCCTACTGCTCTCTGCCACGGACTCGGGAGGGAGCATGAGCTGCATCCAACAGGCCGCAGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 88915 196 + 85365473 agtgtctccCTGGGCCTGCTGGAAGGCCCAGTGCTGAAGGACAACTGGGCACCCCAGCTCTATGGACGGTCACAGGCTCCCACCTGGACAGGGCGGACCCCCTCCTCTCCCTGGGCCTTCTGGTGCCCTGAGCCCCTACTGCTCTCTGCCACAGACTTGGGAGGGAGCATGAGCTGCATCCAACAGGCCGCAGCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929584 196 + 185818997 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCTAAGGACGACCGGGCACCCCGGCTCTTGGGATGCTCACAGGCTGTCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCTACTGCTTTCTGCCACAGACTTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545521 196 + 192294377 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCGAAGGACGACCGGGCACCCCGGCTCTTGGGATGGTCACAGGCTGTCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCTACTGCTTTCTGCCACAGACTTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4306834 196 - 9440265 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCGAAGGACGACCGGGCACCCCGGCTCTTGGGATGGTCACAGGCTGCCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCTACTGCTTTCTGCCACAGACTTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896520 196 - 21915920 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCAAAGGACGACCGGGCACCCCGGCTCTTGGGATGGTCACAGGCTGTCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCTACGGCTTTCTGCCACAGACGTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36359 195 - 21531802 agtgtcttccttGGCCTGCTGGAAGGCCCAGTGCCAAAGGACGACTGGGCACCCCGGCTCCTGGGACGGTCACAGGCTGTCACCTGGCCA-GGCAGACCCCTTCCTGTCACTGGGCCTTCTGGTGCCCTGAGTCCCTACTGCTTTCTGCCACAGACTTGGGAGGGAGTGTGAGCTGCATCCAACAGGCTGCAGGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 58166 196 - 2515279 agtatcttccttGGCCTGCTAGAAGGCCCAGTGCCAAAGGACGACCGGGCACCCCGGCTCTTGGGATGGTCACAGGCTGTCACCTGGCCAGGGCAGACTCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAGTCCCTACTGCTTTCTGCCACAGACTTGGGAGGGAATGTGAGCTGCATCCAACAGGCTGCAGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216678 195 + 6586416 agtgtcctccttGGCCTGCTGGAAGGTCCAGAGCTGAAGGACGACTGGGCA-CTGGGCTTTTGGGATGGTCACAGGCTGTCACCTGGCCAGGGCAGACCCCTTCCTCTCACTGGGCCTTCTGGTGCCCTGAATCCCTCCTGCTTTCTGCCACAGACTTGGGAGGGAGCGTGAGCTGCATCCAACAGGCTGCAGGAG i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I e canFam3.chr6 60976298 1 - 77573801 I e aotNan1.NW_018514293v1 42464 35 + 376347 I e cebCap1.NW_016107703v1 419505 9 - 2125214 I e calJac3.chr2 146582410 0 - 204313951 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=53378.000000 s hg38.chr7_KI270899v1_alt 64467 13 + 190869 GTCCCGGCCTCTC s gorGor5.CYUI01015914v1 25366 13 - 432965 GTCCCGGCCTCTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89111 13 + 85365473 GTCCCGGCCTCTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929780 13 + 185818997 GTCCTGACCTCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545717 13 + 192294377 GTCCTGACCTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307030 13 - 9440265 GTCCTGACCTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896716 13 - 21915920 GTCCTGACCTCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36554 13 - 21531802 GTCCCGACCTCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 58362 13 - 2515279 GTCCTGACCTCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216873 13 + 6586416 GTCCCGACCTCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146582410 13 - 204313951 GTCCCAGCCGCTG i calJac3.chr2 C 0 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I e canFam3.chr6 60976298 1 - 77573801 I e aotNan1.NW_018514293v1 42464 35 + 376347 I e cebCap1.NW_016107703v1 419505 9 - 2125214 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=927383.000000 s hg38.chr7_KI270899v1_alt 64480 142 + 190869 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGCAGTAAAGGCCTAGCGACCTGGGTGGGCATGGGGCACACGTTCTTACTCTGGCATTAGAGGTCATGCCACTGCTTGTCTTTACCATTCTACCCAGTGTCCTGCGAG s gorGor5.CYUI01015914v1 25379 142 - 432965 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTACAGTAAAGGCCTAGCGACCCGGGTGGGCATGGGGCACACATTCCTACTCTGGCATTAGAGGTCATGCCACTGCTTGTCTTTACCATACTACCCAGTGTCCTGCGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89124 142 + 85365473 AGCACCCAAGACCAGAGAGAGGCAGTGCCTCGGCTGCAGTAAAGCCCTAGCGACCAGGGTGGGCATGGGGCACACGTTCCTGCTGTGGCACTAGAGGTCATGCCGCTGCTTGTCTTCACCATTCTACCCAGTGTCCTGCGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929793 142 + 185818997 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGCAGTAAAGGCCTAGCGACCCAGGTGGGCATGGGGCACATGTTCCTACTTTGGCATTAGAGGTCATGCCACTGCTTGTCTTTGCCGTTCTACCCAGTGTCCTGGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33545730 142 + 192294377 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGCAGTAAAGGCCTAGCGACCCGGGTGGGCATGGGGCACATGTTCCTACTTTGGCATTAGAGGTCATGCCACTGCTTGTCTTTGCCGTTCTACCCAGTGTCCTGGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307043 142 - 9440265 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGCAGTAAAGGCCTAGCGACCCGGGTGGGCATGGGGCACATGTTCCTACTTTGGCATTAGAGGTCATGCCACTGCTTGTCTTTGCCGTTCTACCCAGTGTCCTGGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16896729 142 - 21915920 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGCAGTAAAGGCCTAGCGACCCGGGTGGGCATGGGGCACATGTTCCTACTTTGGCATTAGAGGTCATGCCACTGCTTGTCTTTGCCGTTCTACCCAGTGTCCTGGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 36567 141 - 21531802 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGCAGTAAAGGCCTAGCGACCCAGGTGGGCATGGGGCACACGTTCCTAC-TTGGCATTAGAGGTCATGCCACTGCTTGTCTTTGCCATTCTACCCAGTGTCCTGGGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 58375 142 - 2515279 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGCAGTAAAGGCCTAGTGACCTGGGTGGGTATGGGGCACATGTTCCTACTTTGGCATTAGAGGTCATGCCACTGCTTGTCTTTGCCGTTCTACCCAGTGTCCTGGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 216886 142 + 6586416 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGCAGTAAAGGCCTAGCGACCCGGGTGGGCATGGGGCACACGCTCCTACTTTGGCATTAGAGGTCATGCCACTACTTGTCTTTGCCATTCTACCAAGTGTCCTGGGAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146582423 142 - 204313951 AGCACCCAAGACCAGACAGAGGCAGTGCCTCGGCTGCAGTAAAGGCCAAGCGTCCCAGATGGGCGTGGAGCACTCATTCCTGCTTTGGCATTAGAGGTCATGCCACTGTTTATCTTTACTGTTCCACCCAGTGCCCTGAGAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 419514 142 - 2125214 AGCACCCAAGACCAGACAGAGGCAGTGTCTTGGCTGCAGTAAAGGCCAAGAGCCCCGGGTGGGTGTGGAGCACCCATTTCTACTTTGGCATTAGAGGTCATGCCACTGTTTATCTTTATTGTTCCACCCAGTGCCCTGTGAG i cebCap1.NW_016107703v1 I 9 C 0 s aotNan1.NW_018514293v1 42499 142 + 376347 AGCACCCAAGACCAGACAGAGGCAGTGCCTTGGCTGCAGTAAAGGCCAAGCGCCCCGGGTGGGCATGGAGCACGCGTTCCTACTTTGGCATTAGAGGTCACGCCTCTGTTTATCTTTACTGTTCCACCCAGTGCCCTGTGAG i aotNan1.NW_018514293v1 I 35 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I e canFam3.chr6 60976298 1 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=705733.000000 s hg38.chr7_KI270899v1_alt 64622 110 + 190869 GACTTGGTCCTCAGGTGGGTCACAAGTCTCAAGTCCATTAATTAACTGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGGAGCAGG-G-GGACTGGCACCTCATTTCCTCG s gorGor5.CYUI01015914v1 25521 110 - 432965 GACTTGGTCCTCAGGTGAGTCACAAGTCTCCAGTCCATTAATTAACTGGTCGGAAGTGAGTCCCGGCCCATCCCTGTGAGGAGCAGG-G-GGACTGGCACCTCATTTCCTCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89266 110 + 85365473 GACTTCATCCTCAGGTGGGTCACAAGTCTCCAGTCCATTAATTAACCAGTCGGAAGTGAGTCCCGGTCCATCCCTGTGAGGAGCAGG-G-GGACTGGCACCTCATTTCCTCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33929935 109 + 185818997 GACTCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAG-G-GGACTGGCCCCTCATTTCCTCG i rheMac8.chr3 C 0 I 76 s macFas5.chr3 33545872 109 + 192294377 GACTCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAG-G-GGACTGGCCCCTCATTTCCTCG i macFas5.chr3 C 0 I 76 s macNem1.NW_012019910v1 4307185 109 - 9440265 GACTCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAG-G-GGACTGGCCCCTCATTTCCTCG i macNem1.NW_012019910v1 C 0 I 76 s cerAty1.NW_012002954v1 16896871 109 - 21915920 GACTCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAG-G-GGACTGGTCCCTCATTTCCTCG i cerAty1.NW_012002954v1 C 0 I 76 s chlSab2.chr28 36708 110 - 21531802 GACTCGCTCCTCACGTGGGTCACATGTCTCCAGTCCATTAATTAGCCGGTTGGAAGTGAGTCCTGGTCCAACCCTGTGAGAAGCCAG-G-GGACTGGCCCCTCATTTCCTCG i chlSab2.chr28 C 0 I 24 s manLeu1.NW_012101810v1 58517 109 - 2515279 GACTCGCTCCTCACATGGGTCACGTGTCTCCAGTCCATTAA-TAGCCGGTCGGAAGTGAGTCCTGGTCCATCCCTGTGAGAAGCCAG-G-GGACTGGTCCCTCATTTCCTCG i manLeu1.NW_012101810v1 C 0 I 76 s colAng1.NW_012117710v1 217028 109 + 6586416 GACTCGCTCCTCATGTGGGTCACGTGTCTCCAGTCCATTAA-TAGCTGGTCGGAAGTGAGTCCTGGTCCAGCCCTGTTAGAAGCCGG-G-GGACTGGCCCCTCGTTTCCTCG i colAng1.NW_012117710v1 C 0 I 102 s calJac3.chr2 146582565 111 - 204313951 GACTCGGTCCTCAGATGAGTCACATGTCTCCAGTCCATTAATTAACTGGTCAGAAGTGGGTCCCGGTCCATTCCTGTGAGGAGCTGG-GTGGACTGGCACCTCATTTCCTCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 419656 111 - 2125214 GACTTGGTCCTCAGATGAGTCACATATCTCTAGTCTGTTAATTAACTGGTCAGAAATGGGTCCTGGTCCATCCCTGTGAAGAGCCGG-GGGGACTGGCACCTCATTTCATCG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 42641 111 + 376347 GACTCGGTCCTCAGATGAGTCACGTGTCTCCAGTCCATTAATTAACTGGTCGGAAGTGGGTCCCGGTCCATCCCTGTGAGGAGCCGG-GGGGACTGGCACCTCATTTCCTCG i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 60976299 107 - 77573801 GACTTGATCCCCAGGTGGGTCACATGCCCTCAATACAT----TATCTTGTCAGAAGAGACTTCCAGTCCATCCCTGTGAAGAATGGATG-GGACCCATTTTTCATTTCCAAG i canFam3.chr6 I 1 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=2181868.000000 s hg38.chr7_KI270899v1_alt 64732 326 + 190869 TGGACTCATGGCCCTACACAACGACACG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAGAAGGACATTTGCTTTGAGCTCGCCTGGTGGATGGGGTGCCCCTGAACATCTAACCATCAGTTGACATTTCCACCATCAGAAAGTTCCTCTAGGCAGCGCCCAGCTAGTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAATT---------ATGTGG------------TCCACAGTCAACAGCTAACAACATTCATAGGACCTTA--TTAGCCGCCAGCTTGGAGAAGGCCAGTGTCCAGAATAAATCAAATCCTTCATAATTGTCAGACGGTGGTGACTCGGTCAAAT s gorGor5.CYUI01015914v1 25631 325 - 432965 TGGACTCATGGCCCTACACAACGACACG------------------------TCTGGCT--TTCCT-----------GGACCCATGCACTCACT-CCAGAAGGACATTTGCTTTGAGCTCGCCTGGTGGATGGGGTGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCATCAGAAAGTTCCTCTAGGCAGCG-CCAGCTAGTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAATT---------ATGTGG------------TCCACAGTCAACAGCTAACAACATTTATAGGACCTTA--TTAGCCGCCAGCTTGGAGAAGGCCAGTGTCCAGAATAAATCAAATCCTTCATAACTGTCAGACGGTGGTGACTCGGTCAAAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89376 324 + 85365473 TGGACTCGTGGCCCTACACAACGACACG------------------------CCCGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAGAAGGACATTTGCTTTGAGCTGGCCTGGTGGATGGGATGCCCCAGAACATCTAACCATCTGTTGACATTTCCACCATCAGAAAGTTCCTCTAGGCAGCGCCCAACCAGTGCTCCAAAGAGGTGCAGAATC-------------------TC--AGAAATT---------CTGTGG------------TCCACAGTCATCAGCTAACAACATTTATAGGACCTTA--TTAGCCACCAGCTTGGAGAAGGCCGGTGTCCAGAATAAATCAAATCCTTCAGAATTGTCAGACGGTGGCGACTCGGTCAAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33930120 327 + 185818997 TGGACTCAGGGCCCCACACAATGACACG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAAAAGAAAGTTTGCTTTGAGCTCGCCTGGTGGACGGGATGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTCCTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAATT---------ATGTGG------------CCCACAGTCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAGACGGTGGTGGCTCAGTCAAAC i rheMac8.chr3 I 76 C 0 s macFas5.chr3 33546057 327 + 192294377 TGGACTCAGGGCCCCACACAATGACACG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAAAAGAAAGTTTGCTTTGAGCTCGCCTGGTGGACGGGATGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTCCTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAATT---------ATGTGG------------CCCACAGTCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAGACAGTGGTGGCTCGGTCAAAC i macFas5.chr3 I 76 C 0 s macNem1.NW_012019910v1 4307370 327 - 9440265 TGGACTCAGGGCCCCACACAATGACACG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAAAAGAAAGTTTGCTTTGAGCTCGCCTGGTGGACGGGATGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTCCTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAATT---------ATGTGG------------CCCACAGTCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAGACGGTGGTGGCTCGGTCAAAC i macNem1.NW_012019910v1 I 76 C 0 s cerAty1.NW_012002954v1 16897056 327 - 21915920 TAGACTCAGGGCCCCACACAATGACACG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAAAAGAAAGTTTGCTTTGAGCTCACCTGGTGGACGGGATGCCCCTGAACGTCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTCCTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAATT---------ATGTGG------------CCCACAGTCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCTGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAGACGGTAGTGGCTCGGTCAAAC i cerAty1.NW_012002954v1 I 76 C 0 s chlSab2.chr28 36842 328 - 21531802 TGGACTCAGGGCCCCACACAATGACACG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAGAAGAAAGTTTGCTTTGAGCTCGCCTGGTGGACGGGATGCCTCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAATACCTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTTCAGAATC-------------------TCTGAGAAATT---------ATGTGG-----------CCCCGCAGTCATCAGTTTACAACATTTTTAGGACCTTGTTTTAGCCGCCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAGATGGTGGCGGCTCGGTCAAAC i chlSab2.chr28 I 24 C 0 s manLeu1.NW_012101810v1 58702 327 - 2515279 TGGACTCAGGGCCCCACACAATGACACG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAAAAGAAAGTTTGCTTTGAGCTCACCTGGTGGACGGGATGCCCCTGAACGTCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTCCTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAATT---------ATGTGG------------CCCACAGTCATCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCTGGGGTCCAGAATAAATCAAATCC-TCAGAATTGTCAGATGGTAGTGGCTCGGTCAAAC i manLeu1.NW_012101810v1 I 76 C 0 s colAng1.NW_012117710v1 217239 327 + 6586416 TGGACTCAGGGCCCCACATAACCACATG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAGAAGAAAGTTTGCTTTGAGCTCGCCTGGTGGGCATGATGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCACCGGAAAGTTCCTCCAGGCAGCGCCCAGCCAGTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAAGT---------ATGTGG------------CCCACAGTCACCAGCTAACAACATTTTTAGGACCTTGTTTTAGCCACCAGCTTGGAGAAGGCCGGGGTCCAGAATAAATCAAATCC-TCAGAACTGTCAGACGGTGGTGGCTCGGTCAAAC i colAng1.NW_012117710v1 I 102 C 0 s calJac3.chr2 146582676 317 - 204313951 --------TGGCCCCACACAATGACATG------------------------CCTGGCC--TTCCT-----------GGA-CCATGCGCTCACT-CCAGAAGAAAGTTTGCTTTAGGATCGCCTGGTGGACGGGACGCCCCTGAACATCTAGCCATCTGTTGACATTTCCAGCATCAGAAAGTTCCTCTCGGCAGTGCCGGGCCACTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAATT---------ATGTGG------------CCCACAGTCATCAGCTAACAACCTTTCTAGGACCTTG--TTCACCACCAGCTTGGAGAAGGCTGGTGTCCAGAGTAAATCAAATCCTCCAGAATTGTCAGATGGTGGCGACTCAGTCAAAT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 419767 318 - 2125214 --------TGGCCCCACACAATGACATG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAGAAGAAGGTTTGCTTTGGGCTCGCCTGGTGGACAGGACGCCCCTGAACATCTAACCATCTGTTGACATTTCCACCATCAGAAGATTCCTCCAGGCAGCACCCAGCCAGTGCTCCAAAGAGGCGCAGAATC-------------------TCTGAATAATT---------ATGTGG------------CCCACAGTCATCACCTAACAACCTTTCTAGGACCTTG--TTCACCACCAGCTTGGATAAGCCTGGTGTCCAGAGTAAATCAAATCCTTCAGAATTGTCAGACGGTGGCGACTCGGTCAAAT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 42752 318 + 376347 --------TGGCCCCACACGATGACACG------------------------CCTGGCC--TTCCT-----------GGACCCATGCACTCACT-CCAGAAGAAGGTTTGCTTTGGGCTCGCCTGGTGGATGGGACGCCCCTCAACATCTAACCATCTGTTGACATTTCCACCATCAGAAAGTTCCTCCAGGCAGCGCCCGGCCAGTGCTCCAAAGAGGTGCAGAATC-------------------TCTGAGAAATT---------ATGTGG------------CCCACAGTCATCAGCTCACAGACTTTCTAGGACCTTG--TTCAGCACCGGCTTGGAGAAGGCTGGTGTCCGGAGTAAATCAAATCCTTCAGAATTGTCAGACGGTGGCGACTCGGTCAAAT i aotNan1.NW_018514293v1 C 0 I 18 s canFam3.chr6 60976406 387 - 77573801 TAGACTCGTCTTCTCACACAAGAATATGCTCCTGCGTCTCTAGAGCCACAGACCTGGCTGATTCCCATCACTTGAAGAGACCTATGTACTCACTCCCAGAAGGA---------------CACCCAGCAGATGGGATGCCCCCAGACCTATCATTACCTGTTGACATTTCCATCACTGGAAAGTTTCTCAGGATAGCTCCTAGCCAGGGCTCTAAAGAGGTTTAGAACCTTAGCATAGATGAGATTTGTCTGGGAAATTACTTTGCACATGTGAGAAGCCACTGGCCACACTATCACTAGCCAACAACCTTTCTAGCACCTTA--TGATCCACCAGTTTGGAAAAGGCCAGGGTCCAGAACCAATCAAATCCAGCAAAACTGTCACACAGTGGGGAGTCCATCAA-- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=30800.000000 s hg38.chr7_KI270899v1_alt 65058 11 + 190869 CTCGGTCAAAA---------------- s gorGor5.CYUI01015914v1 25956 11 - 432965 CTCGGTCAAAA---------------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89700 11 + 85365473 CTCTGTCAAAA---------------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33930447 11 + 185818997 CTCGGTCAAAA---------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33546384 11 + 192294377 CTCGGTCAAAA---------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307697 11 - 9440265 CTCGGTCAAAA---------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16897383 11 - 21915920 CTCGGTCAAAA---------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 37170 11 - 21531802 CTCGGTCAAAA---------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 59029 11 - 2515279 CTCGGTCAAAA---------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 217566 11 + 6586416 CTCGGTCAAAA---------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146582993 7 - 204313951 ----CTACAGA---------------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 420085 7 - 2125214 ----CTACAGA---------------- i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60976793 25 - 77573801 --CAGCCAATGGCTTCTAACATGCAAA i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2162937 4 - 8137123 I e aotNan1.NW_018514293v1 43070 18 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=82823.000000 s hg38.chr7_KI270899v1_alt 65069 17 + 190869 GATGCTCTGGCCAAAGT s gorGor5.CYUI01015914v1 25967 17 - 432965 GATGCTCTGGCCAAAGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89711 17 + 85365473 GATGCTCTGGCCAAAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33930458 17 + 185818997 GACGCTTTGGCCaaagt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33546395 17 + 192294377 GACACTTTGGCCAAAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307708 17 - 9440265 GACGCTTTGGCCaaagt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16897394 17 - 21915920 GACGCTTTGGCCAAAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 37181 17 - 21531802 GACGCTTTGGCCAAAGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 59040 17 - 2515279 GACGCTTTGGCCAAAGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 217577 17 + 6586416 GATGCTTTGGCCaaagt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146583000 11 - 204313951 GAGGCTATAGT------ i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 420092 11 - 2125214 GATGCTGTAGT------ i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2162941 17 - 8137123 GATGCTTTGGTCATGGG i otoGar3.GL873611 I 4 C 0 s canFam3.chr6 60976818 17 - 77573801 GGTGCTCTGGCCATGGT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 43070 18 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=393965.000000 s hg38.chr7_KI270899v1_alt 65086 58 + 190869 CAACAGAGAGCAGAAGCAACTT-GCTTTTGCTGGTGCCTCAGCAAGA-CCACACAGGGAG s gorGor5.CYUI01015914v1 25984 58 - 432965 CAACAGAGAGCAGAAGCAACTT-GCTTTTGCTGGTCCCTCAGCAAGA-CCACACAGGGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89728 58 + 85365473 CAGCAGAGAGCAGAAGGGACTT-GCTTTTGCTGGTGTCTCAGCAAGA-CCACACAGGGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33930475 58 + 185818997 caacagagagcagcagggactt-gcttttgctgggccctcagcaaga-ccacacagggag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33546412 58 + 192294377 CAACAGAGAGCAGCAGGGACTT-GCTTTTGCTGGGCCCTCAGCAAGA-CCACACAGGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307725 58 - 9440265 caacagagagcagcagggactt-gcttttgctgggccctcagcaaga-ccacacagggag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16897411 57 - 21915920 CAACAGAGAGCGGCAGGGACTT-GCTTTTGCTGGGCCCTCAGCAAGA-CCACAC-GGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 37198 58 - 21531802 CAATAGAGAGCGGCAGGGACTT-GCTTTTGCTGGGCCCTCTGCAAGA-CCACACAGGGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 59057 58 - 2515279 CAACAGAGAGCGGCAGGGACTT-GCTTTTGCTGGGCCCTCAGCAAGA-CCACACAGGGAG i manLeu1.NW_012101810v1 C 0 I 2226 s colAng1.NW_012117710v1 217594 58 + 6586416 caacagagagcggcagggactt-gcttttgctggaccctctgcaaga-ccacacagggag i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146583011 58 - 204313951 CAACAGAGAGCAGAAGGAATTT-GCTTTTGCTGGTCCCTCATCAAAA-CCACATAGGGAg i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 420103 58 - 2125214 CAACAAAGAGCAGAAGGAATTT-GCTTTTGCTGGACCCTCATTAAAA-CCACACAGGGAg i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 43088 58 + 376347 CAACAGAGAGCAGAAAGAATTT-GCTTTTGCTGGTCCCTCATCAAAA-TCACACAGGGAG i aotNan1.NW_018514293v1 I 18 C 0 s otoGar3.GL873611 2162958 58 - 8137123 CCGTGAAGAGCAGGGGGGATTT-GC-TTTGTTGACCCTGAAGCAAAAGCTGTGCAAGGAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60976835 59 - 77573801 CAGTGGAGCACAGGATgaacttcacttccattgacccttcactataa-ctctgcaaggaa i canFam3.chr6 C 0 C 0 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=16056.000000 s hg38.chr7_KI270899v1_alt 65144 12 + 190869 ATTTGCAGGCAA s gorGor5.CYUI01015914v1 26042 12 - 432965 ATTTGCAGGCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89786 12 + 85365473 ATTTGCAGGCAA i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146583069 12 - 204313951 ccttgcaggcaa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 420161 12 - 2125214 ctctgcaggcaa i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 43146 12 + 376347 CTTTGCAGGCAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2163016 12 - 8137123 CGTCACATGTGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60976894 12 - 77573801 tttgacacacaa i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 217652 0 + 6586416 C e chlSab2.chr28 37256 0 - 21531802 C e manLeu1.NW_012101810v1 59115 2226 - 2515279 I e cerAty1.NW_012002954v1 16897468 0 - 21915920 C e macNem1.NW_012019910v1 4307783 0 - 9440265 C e macFas5.chr3 33546470 0 + 192294377 C e rheMac8.chr3 33930533 0 + 185818997 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=11377750.000000 s hg38.chr7_KI270899v1_alt 65156 1779 + 190869 TAAACAATGTTGCCT-AAAACTTTCCCGTGAGGTGGGAAT---TGTTTTCATC---CAGATAAGAAGGTGCCGGCCCAGGGGAGGTGT--GGGTGGCCAAGCCAGGGATGGAGCCCTCACGTGGCCTCAAGAGATCAGCAGCCAGGAGTTAG--CTCTCTCCACAGCACGCTGAAACGGCTCCACGCCTCTGCTGGTGTTTTTATAGGAACCCCTTTTGTGTGTTTGCTTCCTAGCTTGGACT--TGAGTCAAATGGTCTATTAATTAGGGTAGA-TTTAGTCACTCCTGACATCAGCTTGTGTGGTTCGAGCAGCCCAAGGGGA-AGAGACAGGGCCTCCTTTATGCAGA----CCCCGCAGTCTTCAGAGGACTGGACACAGCCCTGGCCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTCATTCCTTGGTCTGTACCTTGAATATAAGGAGATCCGTTTGTACATTTTGCTCTC-GTGCATTATACCAAAGG-AAA--AGAGA-AGATAGT-AGTTTAAAGCTCCCAACACT-TTTCATGTTCTGAGCCTTTAGGTCTCCC-ATATGGTAGAGAATCCACAAATATCAGAGGACCCCAAACCTCGCCCGAGATGAAACAGCTTTGAGGCTTCCAGGGAT----------CCCTCAGAAGGCTGCACCCA---GGCCGGCCACACGTTAAAACGTGATGGCTCTTTTCTTCTCTGTTCACTGT-GGTTTTATCAGACAGAGCTCTAAACCAGTTTATTCAATGACATGGAGTGATTCTCTCC--TGTC--TCTGCTTGTCCAGTGTGTGACAAGAGT-------TGAGAAGTGGGGAGACACA--GGGGGCACATTGAATGCAGGTGGTCTTACCCGCCTCACTCAGGA--TGCACGTCTTGC--CTGGCTAGGCTTGGCCT--CCTCTGCA-CTGTGTGCCCCTCTAAATGAAGCGTGACCCTTCTTCCC-CCACCTCATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCTAGCCTGGACGAGACGGAGCAACAAGGCCGAGTG--GGGAC-GAACACTGGC------------------CTGGCTTTCAGGTCCACCTTTGCCTCATGCAGATGCTTCTCTACCCTTTATGATTGAGATCCTGGAGCAGGGGATCACCTTGTTGTAAG-GACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTAGGACCATTGCTGCAAGCTCCTGGTGTCCCTGAC--AG-TGAGAGAGGCAGGACACTCGCCTGG--GCTGGGCCTGAAGATGCTGCTTTCTCCTCTGCATGCCTGGGGTCCAACGAG------------------------------------------------GGTCATGGGACCCAGGAACGTCTCTGCAACT-CT-GTCTGTAAACATCCAGGAGCTAATT------GT------GACCTGGAAGTCATTCAGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCAGATAAGGGCAGGTGCTTACTCTCCC-AGTGGCTAGCACTGTTAAAACAGACTTT----TTTTTTTctatagccaacatcataacaaatgatgaaatactcaataact----ccccct-aaaacgggaagaaagggaagggtttctgtttttgttttcatctcttcttgtgagcattgggctggg---aggttccagccagtgc-aaagagatgaggaaaaga----aaagtataaatattggaaagaaataagtaaaactatcctcatttacaggtgaaatga-------ggtggcaaatcctaagggatccacaaaaaatcaacttgaaccaataagtgaattctgcaacatcacaagacaccaagtcaatatgtaaagatcagttgtatttctatatactactgatgactaatttaaaa s gorGor5.CYUI01015914v1 26054 1772 - 432965 TAAACAATGTTGCCT-AAAACTTTCCCGTGAGGTGGGAAT---TGTTTTCATC---CAGATAAGAAGGTGCCAGCCCAGGGGAGGTGT--GAGTGGCCAAGCCAGGGATGGAGCCCTCACGTGGCC-CAAGAGATCAGCAGCCAAGAGTTAG--CTCTCTCCACGGCACGCCGAAACGGCTCCACGCCTCTGCTGGTGTTTTTATAGGAACCCCTTTTGTGTGTTTGCTTCCTAGCTCGGACT--TGAGTCAAATGGTCTATTAATTAGGGTAGA-TTTAGTCACTCCTGACATCAGC-TGTGTGGTTCGAGCAGCCCAAGGGGA-AGAGACAGGGCCTCCTTTATGCAGA----CCCCGCAGTCTTCAGAGGACTGGACACAGCCCTGGCCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTCATTCCTCGGTCTGTACCTTGAATATACGGAGATCCGTTTGTATATTTTGCTCTC-GTGCATTATACCAAAGG-AAA--AGAGA-AGATAGC-AGTTTAAAGCTCCCAACATT-TTTCATGTTCTGAGCCTTTAGGTCTCCC-ATATGGTAGAGAATCCACAAATATCAGAGGACCCCAAACCTCGCCCGAGATGAAACAGCTTTGAGGCTTCCAGGGAT----------CCCTCAGAAGGCTGCACCCA---GGCCGGCCACACGTGAAAACGTGATGGCTCTTTTC-TCTCTGTTCACTGT-GGTTTTATCAGACAGAGCTCTAAACCAGTTTATTCAATGACATGGAGTGATTCTCTCC--TGTC--TCTGCTTGTCCAGTGTGTGACAAGAGT-------TGAGAAGTGGGGAGACACA--GGGGGCACATTGAATGCAGGTGGTCTCACCCACCTCACTCAGGA--TGCACGTCTTGC--CTGGCTAGGCTTGGCCT--CCTCTGCA-CTGTGTGCCCCTCTAAAT-AAGCATGGCCCTTCTTCCC-CCACCTCATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCTAGCCTGGA-GAGACGGAGCAACAAGGCCGAGTG--GGGAC-GAACACTGGC------------------CTGGCTTTCAGGTCCACCTTTGCCTCACGCAGATGCTTCTCTACCCTTTATGATTGAGATCCTGGAGCAGGGGATCACCTAGTTGTAAG-GATCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTAGGACCATTGCTGCAAGCT-CTGGTGTCCCTGAC--AG-TGAGAGAGGCAGGACACTCGCCTGG--GCTGGGCCTGAGGATGCTGCTTTCTCCTCTGCATGCCTGGGGTCCAACGAG------------------------------------------------CGTCATGGGACCCAGGAACGTCTCTGCAACT-CT-GTCTGTAAACATCCAGGAGCTAATT------GT------GACCTGGAAGTCATTTGGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCAGATAAGGGCAGGTGCTTACTCTCCC-AGTGGCTAGCACTGTTAAAACAGAC-TT----TTTTTTTctatagccaacatcataacaaatgatgaaatactcaataact----ccccct-aaaacggggagaaagggaagggtttctgtttttgttttcatgtcttctagtgagcattgggctggg---aggttccagccagtgc-aaagagatgaggaaaaga----aaagtataaatattggaaagaaataagtaaaactatcctcatttacaggtgaaatga-------ggtggcaaatcctaagggatccacaaaaaatcaacttgaaccaataagtgaattctgcaacatcacaggacaccaagtcaatatgtaaagatcagttgtatttctatatactactgatgactaatttaaaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 89798 1733 + 85365473 TAAACAATGTTGCCT-AAAACTTCCCCATGAGGTGGGAAT---TGTTTTTATC---CAGATAAGAAGGTGCCGGCCCAGGGGAGGTGT--GGGTGGCCAAGCCAGGGATGGATCCCTCACGTGGCCTCAAGAGATCAGCACCCAGGGGTCAG--CTCTCTCCACGACACGCCGAAACGGTTCCACGCCTGTGCTGGTGTTTTTAGAGGAACCCCTTTCGTGTGTTTGTTTCCTAGCTCGGACT--TGGGTCAAATGGTCTATTAATTAGGGTAGA-CTTAGTCACTCCTGACATCAGCTCGTGTGGTTCGAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGA----CTCCGCAGTGTTCACAGGACTGGACACAGCCCT-GCCCTGCTGCCGTCTGCCGTGCC-TTTGCTTCCTTGGTTTCATTCCTCGGTCTCTACCTTGAATATAATAAGATCTGTTTATACATTTTCCTCTC-GTGCATTATACCAAAGG-AAA--AGAGA-AGACAGT-AGTTTAAAGCTCCCAACATT-TTTCATGTTCTGAGCC-TTAGGTCTCCC-ATACGATAGAGAATCGACAAATATCAGAGGACCTCAAACCTGGCCCGAGATGAAATAGCTTTGAGGCTTCCAGGGAT----------CCCTCGGAAGGCTGCACCCA---GGACGGCCACACGTGAAAACATGATGGCTCTTTTCTTCTCTGTTCACTGT-GGTTTTATCAGACAGAGCTTTAAACTGGTTTATTCAATGACATGGAGTGGTTCTCTCCTATGTC--TCTGCTTGTCCAGTGTGTGACAAGAGT-------TGAGAAGTGGGGAGACACA--GGGGGCACATTGAATGCAGGTGGTCTCACCCGCCTCCCTCAGGA--TGCACGTCTTGC--CTGTCTAGGCTTGGCCT--CCTCTGCA-CTGTGTGCTC--CTAAATGAAGCGTGACCCTTCTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCAAGCTGCTTCCCTGA--CACACGCAGGTCCTAGCCTGGAGGAGACGGAGCAACAAGGCCGAGGG--GGGAC-GAACACTGGC------------------CTGGCTTTCGGGTCCACCTTCGCCGCATGCAGATGCTTCTCTATCCTTTATGATTGAGACCCTGGAGCAGGGGATCACCTAGTTTTGAT-GACCATAAAGTGGAGAAGGAGCAGG-GAGCAGTTAGGGCCATTGCTGCAAGCTCCTGGTGTCCCTGAC--AG-TGAGAGAGGCAGGACACTCGCCTGA--GCTGGGCCTGAGGATGCTGCTTTCTCCTCTGCATGCCTGGGGTCCAACGAG------------------------------------------------GGTCATGGGACCCAGGAACATCTCTGCAACT-CT-ATCTGTAAACATCCAGGAGCTAATT------GT------GACCTGGAAGTCATTTGGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCAGATAAGGGGAGGTGCTGACTCGCCC-ACTGGCTAGCACTGTTAAAACAGAC--------TTTTTTctatagcgaacatcataacaaatgatgaaatactcaataact----ccccct-aaaacggggagaaagggaagggtttctgtttttgttttcatctcttctagtcagcattgggctggg---aggttgcagccagtgc-gaagagatgaggaaaaga----aaagtatacacattggaaagaaataagtaaaatgatcctcagttacaggtgaaatga-------gatggcaaatcctaagggatccacaaaaaatcaacttgaaccaataagtgaatt-taaaacatcacaggacaccaggtcaatatataaagata-------------------------------------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33930533 1723 + 185818997 taaacaatgttgcct-ccaatttTCCCGTGAGGTGAGAAA---TCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGT--GGGTGGCCAGGCCGGGGATGGAGCCCTCACGCGGCCTC--GAGATTAGCACCCAGGCGTCGG--CTCTCTCCACGACACGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCTGCTCAGACT--TAGGTCAAATGGTCTATTAATTACAGGAGA-TTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGA----CTCTGAAGTCTTCAGAGGACTGGACACAGCCCT-GGCCTGCTGCTGTCTGCCATGCCTTTTGCTCCCTGGGTTTTATTCCTTGCTCTGTACCTTGAATATAATAAGATCCGTTTGCACATTTTGCTCTT-ATGCCTGACACCAAAGG---A--AGAGA-AGATAGT-AGTTTAAAGCTCCCAACATT-TTTCATGTTCTGAGCC-TTAGGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAACAGCTTTGAGGCTTCCAGGGAT----------CCCTCAGAAGGCTGCACCCA---GGCTGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCATGACATGGAGGGGTTCTCTCCTATGTC--TCTGCTTGTCCAGTGTGTGACAAGAGT-------TGAGAAGTGGGGAGACACA--GGGGGCACACTGAATGCAGGTGGTCTCACCCGCCTCACTCTGGA--TATACATCTTGC--CTGGCTAGGCTTGGCCT--CCTGTGAA-CTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCTTGA--CACGTGCAGGTGTCAGCCTGGAGGAGACGGAGCAACAAGGCCTAGTG--GGGAT-GAACA-----------------------CTGGCTTTCTGGTCCACCTTTGCCTCATGCCAATGCTTCTCTATCCTTTATGACTGAGATCCTGGAGCAGGGAATCACTTAGTCTTAAT-GACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGATGCTGCTTGCTCCTCTGCCTGCCTGGGGCCCAGCGGG------------------------------------------------GGTCACGGGACCCAGGACTGTCTCTGCGACT-CT-AGTTGTAAACATCCAGGAGC-AGTT------GT------GACCTGGAAGTCATTCGGCACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTTAAAACAGAC--T----TTTTTTTctatagccaatgtcataacaaatgaggaaatactcaataact----ccccct-aaaatggggagaaacggaagggtttctggatttgttttcatcttttccagtca-cattgggctggg---aggttccagtcagtgc-aaagagacgaggaaaaga----aaagtacaaatattggaaagaaatcagtaaaattaccctcatttacaggtgaaatga-------gatggcaaatcctaagggatccacaaaaaatcagcttgaaccaataagtgaattttgcgacatcacaggacaccaagtcaatatacaaagatc-------------------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33546470 1725 + 192294377 TAAACAATGTTGCCT-CCAATTTTCCCGTGAGGTGAGAAA---TCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGT--GGGTGGCCAGGCCGGGGATGGAGCCCTCACGCGGCCTC--GAGATTAGCACCCAGGCGTCGG--CTCTCTCCACGACACGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCTGCTCAGACT--TAGGTCAAATGGTCTATTAATTACAGGAGA-TTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGA----CTCCGAAGTCTTCAGAGGACTGGACACAGCCCT-GGCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTTATTCCTTGCTCTGTACCTTGAATATAATAAGATCCGTTTGCACATTTTGCTCTT-ATGCCTGACACCAAAGG---A--AGAGA-AGATAGT-AGTTTAAAGCTCCCAACATT-TTTCATGTTCTGAGCC-TTAGGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAACAGCTTTGAGGCTTCCAGGGAT----------CCCTCAGAAGGCTGCACCCA---GGCTGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCATGACATGGAGGGGTTCTCTCCTATGTC--TCTGCTTGTCCAGTGTGTGACAAGAGT-------TGAGAAGTGGGGAGACACA--GGGGGCACACTGAATGCAGGTGGTCTCACCCGCCTCACTCTGGA--TATACATCTTGC--CTGGCTAGGCTTGGCCT--CCTGTGAA-CTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCTTGA--CACGTGCAGGTGTCAGCCTGGAGGAGACGGAGCAACAAGGCCTAGTG--GGGAT-GAACA-----------------------CTGGCTTTCTGGTCCACCTTTGCCTCATGCCAATGCTTCTCTATCCTTTATGACTGAGATCCTGGAGCAGGGAATCACTTAGTCTTAAT-GACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGATGCTGCTTGCTCCTCTGCCTGCCTGGGGCCCAGCGGG------------------------------------------------GGTCACGGGACCCAGGACTGTCTCTGCGACT-CT-AGTTGTGAACATCCAGGAGC-AGTT------GT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTTAAAACAGACTTT----TTTTTTTctatagccaatgtcataacaaatgaggaaatactcaataact----ccccct-aaaatggggagaaacggaagggtttctggatttgttttcatcttttccagtca-cattgggctggg---aggttccagtcagtgc-aaagagacgaggaaaaga----aaagtacaaatattggaaagaaatcagtaaaattaccctcatttacaggtgaaatga-------gatggcaaatcctaagggatccacaaaaaatcagcttgaaccaataagtgaattttgcgacatcacaggacaccaagtcaatatacaaagatc-------------------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4307783 1725 - 9440265 taaacaatgttgcct-ccaatttTCCCGTGAGGTGAGAAA---TCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGT--GGGTGGCCAGGCCGGGGATGGAGCCCTCACGCGGCCTC--GAGATTAGCACCCAGGCGTCGG--CTCTCTCCACGACACGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCTGCTCAGACT--TAGGTCAAATGGTCTATTAATTACAGGAGA-TTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGA----CTCCGAAGTCTTCAGAGGACTGGACACAGCCCT-GGCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTTATTCCTTGCTCTGTACCTTGAATATAATAAGATCCGTTTGCACATTTTGCTCTT-ATGCCTGACACCAAAGG---A--AGAGA-AGACAGT-AGTTTAAAGCTCCCAACATT-TTTCATGTTCTGAGCC-TTAGGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAACAGCTTTGAGGCTTCCAGGGAT----------CCCTCAGAAGGCTGCACCCA---GGCTGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCATGACATGGAGGGGTTCTCTCCTATGTC--TCTGCTTGTCCAGTGTGTGACAAGAGT-------TGAGAAGTGGGGAGACACA--GGGGGCACACTGAATGCAGGTGGTCTCACCCGCCTCACTCTGGA--TATACATCTTGC--CTGGCTAGGCTTGGCCT--CCTGTGAA-CTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCTTGA--CACGTGCAGGTGTCAGCCTGGAGGAGACGGAGCAACAAGGCCTAGTG--GGGAT-GAACA-----------------------CTGGCTTTCTGGTCCACCTTTGCCTCATGCCAATGCTTCTCTATCCTTTATGACTGAGATCCTGGAGCAGGGAATCACTTAGTCTTAAT-GACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGATGCTGCTTGCTCCTCTGCCTGCCTGGGGCCCAGCGGG------------------------------------------------GGTCACGGGACCCAGGACTGTCTCTGCGACT-CT-AGTTGTAAACATCCAGGAGC-AGTT------GT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTTAAAACAGACTTT----TTTTTTTctatagccaatgtcataacaaatgaggaaatactcaataact----ccccct-aaaatggggagaaacagaagggtttctggatttgttttcatcttttccagtca-cattgggctggg---aggttccagtcagtgc-aaagagacaaggaaaaga----aaagtacaaatattggaaagaaatcagtaaaattaccctcatttacaggtgaaatga-------gatggcaaatcctaagggatccacaaaaaatcagcttgaaccaataagtgaattttgcgacatcacaggacaccaagtcaacatacaaagatc-------------------------------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16897468 1724 - 21915920 TAAACAATGTTGCCT-CCAATTTTCCCGTGAGGTGAGAAA---TCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGT--GGGTGGCCAGGCCGGGGATGGAGCCCTCACGCGGCCTC--GAGATCAGCACCCAGGCGTCGG--CTCTCTCCACGACACGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCCGCTCAGACT--TAGGTCAAATGGTCTATTAATTACGGGAGA-TTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGA----CTCCGCAGTCTTCAGAGGACTGGACACAGCCCT-GGCCTGCTGCTGTCTGCCGTGTCTTTTGCTCCCTGGGTTTTATTCCTTGGTCTGTACCTTGAATATAATAAGATCCGTTTGCACATTTTGCTCTTAATGCCTGACACCAAAGG---A--AGAGA-AGATAGT-AGTTTAAAGCTCCCAACATT-TTTCATGTTCTGAGTC-TTAGGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAACAGCTTTGAGGCTTCCAGGGAT----------CCCTCAGAAGGCTGCACCCA---GGCCGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCATGACATGGAGGGGTTCTCTCCTATGTC--TCTGCTTGTCCAGTGTGTGACAAGAGT-------TGAGAAGTGGGGAGACACA--GGGGGCACACTGAATGCAGGTGGTCTCACCCGCCTCACTCTGGA--TATACATCTTGC--CTGGCTAGGCTTGGCCT--CCTGTGAA-CTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCCAGCCTGGAGGAGACGGAGCAACAAGGCCTAGTG--GGGAT-GAACA-----------------------CTGGCTTTCTGGTCCACCTTTGCCTCATGCCAATGCTTCTCTATCCTTTATGACTGAGATCCTGGAGCAGGGAATCACTTAGTCTTAAT-GACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCACTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGACGCTGCTTGCTCCTCTGCCTGCCTGGGGCCCAGCGGG------------------------------------------------GGTCACGGGACCCAGGACTGTCTCTGCGACT-CT-AGTTGTAAACATCCAGGAGC-AGTT------GT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTTAAAACAGAC--T----TTTTTTTctatagccaatgtcataacaaatgaggaaatactcaataact----ccccct-aaaatggggagaaacggaagggtttctggatttgttttcatcttttctagtca-cattgggctggg---aggttctagtcagtgc-aaagagacgaggaaaaga----aaagtacaaatattggaaagaaatcagtaaaattaccctcatttacaggtgaaatga-------gatggcaaatcctaagggatccacaaaaaatcagcttgaaccaataagtgaattttgcgacatcacgggacaccaagtcaatatacaaagatc-------------------------------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 37256 1721 - 21531802 TAAAAAATGTTGCCT-CCAACTTTCCCGTGAGGTGAGAAT---TCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGT--GGGTGGCCAGGCTGGGGATGGAGCCCTCACACGGCCTC--GAGATCAGCACCCAGGCGTCGG--CTCTCTCCACGACACGCCGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACTC---TTGTGTGTTTGTTTCCCCGCTCAGACT--TAGGTCAAATGGTCTATTAATTACGGGAGA-TTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGAGACAAGGCCTCCTTTATGCAGA----CTCCGCAGTCTTCAGAGGACTGGACACAGCCCT-GGTCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTAGGTTTCATTCCTTGGTCTGTACCTTGAATATAATAAGATCCATTTGCACATTTTGCTCTT-ATGCCTGACACCAAAGG---A--AGAGA-AGATAGTAAGTTTAAAGCTCCCAACATT-TTTCATGTTCTGAGCC-TTAGGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAGACCTGGCCCGAGATGAAACAGCTTTGAGGCTTCCAGGGAT----------CCCTCAGAAGGCTGCACCCA---GGCCGGCCACATGTGAAAATATGGTGGC---TTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAACTGGTTTATTCCATGACATGGAGGGGTTCTCTCCTATGTC--TCTGCTTGTCCAGTGTGTGACAAGAGT-------TGAGAAGTGGGGAGACACA--GGGGGCACACTGAATGCAGGTGGTCTCACCCACCTCACTCAGGA--TGTACGTCTTAC--CTGGCTAGGCTTGGCCT--CCTGTGCA-CTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCCAGGCTGGAGGAGACGGAGCAACAAGGCCGAGTG--GGGAC-GAACA-----------------------CTGGCTTTCTGGTGCACCTTTGCCTCATGCAAATGCTTCTCTATCCTTTACGATTGAGATCCTGGAGCAGGGAATCACCTAGTCTTAAT-GACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGTGGGACACTCCCCTGG--GCTGGGCCTGAGGACGCTGCTTTCTCCTCTGCCTGCCTGGGGCCCAGCAGG------------------------------------------------GGTCATGGGACCCAGGACTGTCTCTGCAGCT-CT-AGTTGTAAACATCCAGGAGC-AGCT------GT------GACCTAGAAGTCATTCGGAACTTAGCATAGAGGCCCCCAGAAGTCTCTGCCTTCAGATAAGGAGAGGTGCTTGCTCTCCC-AGTGGCTGGCTCTGTTAAAACAGAC--T----ATTTTTTctatagccaacatcataacaaatgaggaaatactcaataact----ccccct-aaaatgaggagaaatggaa-ggtttctggatttgtttttgtctcttccagtcagcattgggcttgg---aggttccagtcagtgc-aaagagacgaggaaaaga----aaagtacaaatattggaaagaaatcagtaaaattaccctcatttacaggtgaaataa-------gatggtaaatcctaagggatccacaaaaaatcagcttgaaccaataagtgaattttgcgacatcttaggacaccaagtcaatatacaaagatc-------------------------------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 61341 1722 - 2515279 TAAACAATGTTGCCT-CCAATTTTCCCGTGAGGTGAGAAA---TCTTCTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAGGTGT--GGGTGGCCAGGCTGGGGATGGAGCCCTCACGTGGCCTC--GAGATCAGCATCCAGGCGTTGG--CTCTCTCCACGACAGGCAGAAACGGCTCCACGCCTGTGCTGGTGTTTTCATAGGAACCC---TTGTGTGTTTGTTTCCCCGCTCAGACT--TAGGTCAAATGGTCTATTAATTACGGGAGA-TTTAGTCACTCCTGACACCAGCGTGTGTGGTTCAAGCAGCCCAAGGGGA-AGTGACAAGGCCTCCTTTATGCAGA----CTCCGCAGTCTTCAGAGGACTGGACACAGCCCT-GGCCTGCTGCTGTCTGCCGTGCCTTTTGCTCCCTGGGTTTTATTCCTTGGTCTGTACCTTGAATATAATAAGATCCGTTTGCACGTTTTGCTCTT-ATGCCTGACACCAAAGG---A--AGAGA-AGATAGT-AGTTTAAAGCTCCCAACATT-TTTCATGTTCTGAGCC-TTAGGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAAACCTGGCCCGAGATGAAACAGCTTTGAGGCTTCCAGGGAT----------CCCTCAGAAGGCTGCACCCA---GGCCGGCCACATGTGAAAACATGGTGGCTCTTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAAATGGTTTATTCCATGACACGGAGGGGTTCTCTCCTATGTC--TCTGCTTGTCCAGTGTGTGACAAGAGT-------TGAGAAGTGGGGAGACACA--GGGGGCACACTGAATGCAGGTGGTCTCACCCGCCTCACTCTGGA--TATACATCTTGC--CTGGCTAGGCTTGGCCT--CCTGTGAA-CTGTGTGCCCCTCTAAATGAAGCATGACCCTTGTTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCATGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCAGGTCCCAGCCTGGAGGAGACAGAGCAACAAGGCCTAGTG--GGGAT-GAACA-----------------------CTGGCTTTCTGGTCCACCTTTGCCTCATGCCAATGCTTCTCTATCCTTTATGACTGAGATCCTGGAGCAGGGAATCACTTAGTCTTAAT-GACCATAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACAGAG-TGAGAGAGGCGGAACACTCGCCTGG--GCTGGGCCTGAGGACGCTGCTTGCTCCTCTGCCTGCCTGGGGCCCAGCGGG------------------------------------------------GGTCAC--GACCCAGGACTGTCTCTGCGACT-CT-AGTTGTAAACATCCAGGAGC-AGTT------GT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGCTAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTTAAAACAGAT--T----TTTTTTTctatagccaatgtcataacaaatgaggaaatactcaataact----ccccctaaaaatggggagaaacggaagggtttctggatttgttttcatcttttccagtca-cattgggctggg---aggttccagtcagtgc-aaagagacaaggaaaaga----aaagtacaaatattggaaagaaatcagtaaaattaccctcatttacaggtgaaatga-------gatggcaaatcctaagggatccacaaaaaatcagcttgaaccaataagtgaattttgcgacatcacgggacaccaagtcaatatacaaagatc-------------------------------------- i manLeu1.NW_012101810v1 I 2226 C 0 s colAng1.NW_012117710v1 217652 1702 + 6586416 taaacagtgttgcct-ccaacttTCCCGTGAGGTGAGAAT---TCTTGTTATC---CAGATGAGAAGGTGCAGGCCCAGGGCAAGTGT--GGGTGGCCAGGACGGGGATGGAGCCCTCACGCGGCCTC--GAGATCAGCACCCGGGCGTCAG--CTCTCTCCATGATACGCCGCAACGGCTCCACGCCTGTGCTG-----------------------GTGTGTTAGTTTCCCCGCTCAGACT--TAGGTCAAATGGTCTATTAATTATGGGAGA-TATAGTCACTCCTGACGTCGGCGTGTGTGGTTCAAGCAGCCCGAGGGGA-AGAGACAAGACCTCCTTTATGCAGA----CTCCGCAGTCCTCAGAGGACTGGACACAGCCCT-GGCCTGCTGCTGTCTGCCGTGCCTTTTGCTCTCTGGGTTTCACTCCTTGGTCTGTACCTTGCATATAATAAGATCCATTTGCACATTTTGCTCTT-ATGCCTGACACCAAAGG---A--AGAGA-AGGCAGT-AGTTTAAAGCTCCCAACGTT-TTTCATGTTCTGAGCC-TTAGGTCTCCC-ACATGGTAGAGAATCAACAAATATCAGAGGACCCCAGACCTGGCCCGAGATGAAACAGCTTTGAGGCTTCCAGGGAT----------CCCTCAGAAGGCTGCACCCA---GGCTGGCCACATGTGAAAACATGGTGGCTCCTTTCTTCTCTGCTCACTGT-GGTTTTAT----CAGAGCTCTAAGCTGGTTTATTCCATGACATGGAGGGGTTCTCTCCGATGTC--TCCGCTTGTCCAGTGTGTGACAAGAGT-------CGAGAAGTGGGGAGACACA--GGGGGCACACTGAATGCAGGTGGTCTCACCTGCCTCACTCAGGA--TGTACGTCTTGC--CTGGCTAGGCTTGGCCT--CCTATGCA-CTGTGTGCCCCTCCAAATGAAGCATGACCCTTGCTCCC-CCACCTAATTGGTGGTTCTCTGCCCCCACGAGCTCAGCCAGCTGCTTCCCTGA--CACATGCGGGTCCCAGCCTGGAGGAGACGGAGCAACAAGGCCGAGTG--GGGAT-GAACA-----------------------CTGGCTTTCTGGTCCACCTTTGCCTCATGCAAATGCTTCTCTATCCTTTATGACTGAGATCCTGGAGCAGGGAATCACCTAGTCTTAAT-GACCATAAAGTGGAGAAGGAGCAGG-GAGGGGCTGGGACCATTGCTGCAAGCTCTTGGTGTCCCTGACGGAG-TGAGAGAGGCGGGACACGAGCCTGG--GTTGGGCCTGAGGATGCTGCTTTCTCCTCTGCCTGCCTGGGGCCCAGCGGG------------------------------------------------GGTCACAGGACCCGGGACTGTCTCTGCGACT-CT-AGCTGTAAACATCCAGGAGC-AGCT------GT------GACGTGGAAGTCATCCAGAACTCAGCACAGAGGCCTCCAGAAGTCCCTGCCTTCAGACAAGGACAGGTGCTTGCTCTCCC-AGTGGCTGGCACTGTTAAAACAGAC-------TTTTTTTctatagccaacatcataacgaatgaggaaatactcaataact----ccccct-aaaatggggagaaacagaaaggtttctggatttgttttcatctcttccagtca-cattgggctggg---aggttccagtcagtgc-agagagacgaggaaaaga----aaggtacaaatattggaaagaaatcagtaaaattaccctcatttacaggtgaagtga-------gatggcaaatcctaagggatccacagaaaatcagcttgaaccaataagtgaattttgcgacatcacaggacaccaagtcaatacacaaagatc-------------------------------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146583081 1721 - 204313951 taaacaatgttacct-acaactatcccctgaggtgggaat---ttttcctatc---cagataagaaggtgcaggctcagaggaggtgt--gggtggccaagccagggATGGAGCCCTCATGTGGCCTCAAGGGATCAGCACCCCAGAATCAG--CTCTCTCTGCAACATGCTGAAATGG--------CTGTGTCGCTGTGTTTATAGCGACGCCTTTTTTGTGTTTGTTTCCTAGCTCAGACT--TAGGTCAAATGGTCTATTAATTAGGGCAGG-TTTAGTTACTCCAGACATCAGCTTGTGTGGCTCAAGCAGCCCAAGG--------------CCTCCTTTGCAC--A----GTCTGAGG---TCAGAGGACTGGACCCAGCCCTGGCCCTGCTGCTGTCTGCCGTGCCTCTTGCTCCTTGGGTTTCATTCCTTGGTCTGTATCTTGAATATAATACAGCCCTTTTGTACATTTTGCTCTC-ATGCAGTATACCAAAGG---AAGAGAGG-AGACAGT-AGTTTAAAGCCCCCAAC-TA-TTTTATTTTCTGAGCC-TTAAGTTTCTC-ATATAGTAGAGAATCAACAAATATCAGAGGATCCCATACCTGGCCGGAGATGAAATGGCTTTGAGTCTTCCAGGCAT----------CTGTCAGAAGGCTGCACCCA---GGCCGGCCACACATGGAAACATGATGATTCTCTTCTTCTCTGTTCACTGTGGGTTTTGTCAGACAGAGCTCTAAACTGGTTTATTTAATGACGTGGAATGGTTCTCTTCTATGTC--TCTACTTACCCAGAGTGTGACAAGAGT-------TGACAAGTGGGGAG--ACA--GGAGGCACACTGAATGCAGGTGGTCTCTCCTGCCTCACTCAGGA--TGCATGTCTTGC--CCGGCTG-----GGCCC--CCTGTGCA-CTGTGTGCTCCTCTAAGTGAAGCATGACCCTTGTTTCC-CCACCTAATTGGTGGTTCTCTGCCCCCACAAACCCAGCCATATGGTTCCCTGACACACATGCAGGTCTTAGCCTGGAGGAGACGGAGCAGCAAGGCCAAGTG--GGCAC-AAACACTTGC------------------CTGGACTTCTGGTCCACCTT-GCCTGATGCAAATGCTTCTCTATCCTTCACAGTTGAGATCCTGGAGCA-GGGATCACCTAGTCTTAAT-GGCTGTAAAGTGGAGAAGGAGCAGG-GAGAGTTCAGGACTGTAG-------CTCTTGCTGTCCCTGGCAGAG-TGAGAGAGGCAGGACACTGGCCTGG--ACCAGACCTGAGGATGCTGCTTTCTCCTCTGCCTGCCTGGGTTCCAACAGG------------------------------------------------GGTCATGGGACCCAGGAAGGCCTCTGCAACT-CT-AACTGAAAGTATCCATGAGCTAACT------GT------GACCTGGAAGTCATTCGGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCAGATGAGGACAGGTGCTTACTCTCCCAAGTGGCTAGCACTGTTAAAACAGAC--T----TTTTTTTctacagccaacatcataacaaatgatgacacactgaataactgccccccact-aaaacggaaaaaaagggaaggctttctggttttgctttcatctcttctggtcaacatagggctggg---aggttccagccagtgcaaaagagatgaggaaaagaaattaaagtataaatattggaaataaataaggaaaactgtcctaatttacaggtgaaataa-------gatggcaaatcctaaggaatccacaagaaatcaacttgaactagtaagtgaattttgcaacatcacaggttaccaagtcaatatataaagatcagttgtatt----------------------------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 420173 1725 - 2125214 taaacaatgttgcct-acaactatcccttgaggtgggaat---ttttcctatc---cagataagaaagtgcaggcccagaggaggtGT--GGGAGGCCAAGCTGGGGATGGAGCCCTCACATGGCCTCAAGGGATCAGCACCCCAGAATCAG--CTCTCTCCGCAACATGCGGAAATGGCTCCATGCCTGTGTCACTGTGTTTATAGCTAC-CCCTTTTTGTGTTTGTTTCCTAGCTCAGACT--TAGGTCAAATGGTCTATTAATTAGGGCAGG-TTTAGTTACTCCAGACATCATCTTGTGTGGCTCAAGCAGCCCAAGG--------------CCTCCTTTACACAGA----GTCTGCAG---TCAGAGGACTGGACCCAGCCCCAGCCCTGCTGCTGTCTGCCGTGCCTCTTGCTCCCTGGGTTTCATTCCTTGGTCTGTATCTTGACTATAATACAGCCCTTTTGTACATTTTGCTCTC-ATGCATTATACCAAAGG---AAGAGAGG-AGACAGT-AGTTTAAAGCCCCCAAC-TT-TTTTATTTTCTGAGCC-TAAAGTTTCTC-ATATAGTAGAGAATCAACAAATATCAGAGGATCCCATACCTGGCCAGAGATGAAACGGCTTTGAGTCTTCCAGGGAT----------CCATCAGAAGGCTGCACCCA---GGCCGGCCACACGTGGAAACATGATGATTCTCTTCTTCTCTGTTCACTGTGGGTTTTGT----CAGAGCTCTAAACTGGTTTATTCAATGACATGGAGTGGTTCTCTTCTATGTC--TCTGGTTATCCAGTGTGTGACAAGAGT-------TGACAAGTGGTGAG--ACA--GGAGGCACACTGAATGCAGGTGGCCTCTCCTGCCTCACTCAGGA--TGCACGTCTTGC--CCAGCTG-----GGCCC--CCTGTGCA-CTATGTGCTCCTCTAAATGAAGCATGACCCTTGTTTCC-CCACCTAATTGGTGGTTCTCTGCCCCCACAAGCCCAGCCATATGGTTCCCTGACACACATGCAGGTCCTAGCCTGGAGGAGACAGAGCAGCAAGGCCGAGTG--GGGAC-GAACGCTGGC------------------CTGGACTTCTGGTCCACCTT-GCCTGATGCAAATGTTTCTCTATCCTTTATGACTGAGATCCTGGAGCA-GGGATCACCTAGCCTTAAT-GGCTGTAAAGTGGAGAAGGAGCAGG-GAGAGGTTGGGACCGTAG-------CTCTTGCTCTCCCTGGCAGAG-TGAGAGAGGCGGGACACTCGCCTGG--ACCAGGCCTGAGGATGCTGCTTTCTCCTCTGCCTGCCTGGGGCCCAATGGG------------------------------------------------GGTCATGGGCCCCAGAAAGGCCTCTGCAACT-CT-AGCTGAAAGTATCCATGAGCTAACT------GT------GGCCAGAAAGTCATTCGGAACTCAGCACAGAGGCCTTCAGAAGTCCCTGCCTTCCGATGAGGACAGGTGCTTACTCTCCCAAGTGGTTAGCACTGTTAAAACAGAC--TT--CTTTTTTTctacagccaacatcataacaaatgatgacatactgaataact---cccccct-aaaatggggaaaaagggagggctttctgtttttgctttcatctcttctagtcaacattgggctggg---aggttccagccagtgcaaaagagatgaggaaaagaaataaaagtataaatattagaaataaataaggaaaactaacctcatttacaggtgaaatga-------gatggcaaatcctaaggaatccacaaaaaatcaacttgaactagtaagtgaattttgcaacatcacaggataccaagtcaatatataaagatcagttgtatt----------------------------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 43158 1728 + 376347 TAAACAATGTTGCCT-ACAACTGTCCCATGAGGTGGGAAT---CCTTCCTATC---CAGATAAGAAGGTGCAGGCCCAGAGGAGGTGT--GGGTGGCCAAGCTGGGGATGGAGCCCTCACGTGACCTCAAGGGATCAGCACCTCGGAATCAG--CTCTCTCCACAACATGCTGAAAGGGCTCCATGCCTGTGTCGCTGTGTTTATAGCGATCCTTTTTTTGTGTTTGTTTCCTAGCTCAGACT--TAGGTCAAATGGTCGATTAATTAGGGCAGG-TTCAGTTACTCCAGACGTCGGCTTGTGTGGCTCAAGCAGCCCAAGG--------------CCTTCTTTACACAGA----GTCTGCAG---TCAGAGGACTGGACCTGGTCCCGGCCCTGCTGCTGTCTGCCGCGCCTCTTGCTCCCTGGGTTTCATTCCTTGGTCTGTATCTTGAATATAATACAGCCCTTTTGTACATTTTGCTCTC-ATGCATCACACCAAAGG---A--AGAGG-AGACAGT-AGTTTAAAG-CCCCAAC-TG-TTTTATTTTCTGAGCC-TTAAGTTTCTC-ATCTAGTAGAGAATCAGCAAAGATCAGAGGATCCCACACCTGGCCAGAGACGAAACGGCTTTGAGTCTTCCAGGGAT----------CCGTCAGAAGGCTGCACCCA---GGCCGGCCAC------------------TCTCTTCTTCTCTGTTCACTGTGGGTTTTCT----CAGAGCTCTGAACTGGTTTATTCGATGACATGGAGTGGTTCTCTTCTGTGTC--TCTGCTTATCCGGCGTGTGACAAGAGT-------TGACAAGTGGGGAG--ACG--GGAGGCACGCTGAATGCAGG-GGTCTCTCCCGCCTCACTCAGGA--TGCACGTCTTGC--CCGGCTG-----GGCCC--CCTGTGCA-CCACGTGCTCCTCTAAATGAAGCATGACCCTTGTTTCC-CCACCTAATTGGTGGTTCTCTGCCCCCACAAGCCCAGCCATATGGTTCCCCGACGCACATGCAGGTCCTAGCCTGGAGGAGATGGAGCAGCAAGGCCAGGTG--GGCAC-GAACGCTGGC------------------CTGGACTTCTGGTACACCCT-GCCTGATGCCAATGCTTCTCTATCTTCTACGATTGAGATCCTGGAGCAGGGGATCACCTAGTGTTAAT-GGCTGTAAAGTGGAGAAGGAGCAGG-GAGAGGTTAGGACCATAGCT-----CTCTTGCTGCCCCTGGCAGAG-TGAGAGCGGCGGGACACTCGCCTGG--ACCGGACCTGAGGATGCTGC-TTCTCCTCTGCCTGCCTGGGGCCCAGTGGG------------------------------------------------GGTCATGGGACCCAGGAAGGCCTCTGCAGCT-GT-AGCTGAAAGTATCCGTGAGCTGACT------GT------GACCCGGAAGTCATTCGGAACTCAGCACGGAGGCCTTCAGACGTCCCTGCCTTCAGATGAGGACAGGTGCTTAATCTCCCAAGTGGCTAGCACTGTAAACACAGAC-------GTTTTTTctacagccaacatcataacaaatgatgacatcctgaataact---cccccct-aaaacggggaaagaaggaaggctttctgtttttgctttcatctcttctagtcaacattgggctggg---aggttccagccagtgcaaaagagatgaggaaaagaaataaaagtataaatattggaaataaataaggaaaactgtcctcatctacaggtgtgatga-------gatggcaaatcctaaggagtccacaaaaaatcaacttgaacttgtaagtgaattttgcgacagcacaggatgccaagtcagtatataaggatcagttgtgtt----tatactactgatgactaattcaaaa i aotNan1.NW_018514293v1 C 0 I 450 s otoGar3.GL873611 2163028 1683 - 8137123 GAAACAATGTTGTCT-ACAAAGATCCCATGAGGTGGGAAG---TCCTCTCCTCAGGCTGATGAGAAGGCCCAGGTCCAGAG---------GGGTGAGCGGGTC-----TGGGGTCTGCATGTGGCT------------------------GG--TTCTTTCTGTAGCACACAGAGG-GTCTCCATGTCTTT-CCAGGGTTTACATGTGTACCCCA-GTTTGTGTTTGATTCCTAGCTCGGACT--T-GACCAAATGGACTGCTGTCAAGGATACG-GTTAGTCATTACAGACTCCAGC-TGTGTCACTCAAACAGCACAGGGAGACAGACCCGTGGTCTGTCTGGGACAGC----TCGGGCTGTGTTTGGAGGCCCAGAAGCCACCCC-ACTGTGCT----TATGCAG--------------------------CTTGGCCTAAACCCTGAGTACCATATTTGCCCTTTGTCCA-TTCGTGCTC-ATGCATCCTAACATAGA---A-GAGTGA-GTGGGGT-CGTTTATAGCTTCCAAAATGATTTCATTTTCTGAGCC-TTTGGTCTTCCAATCTGGCAGAAAATCAACAA-----------------ACTTTGCCTGAGATGAAATGGCTCTGAGGCTTCCAGAAAC----------GCCTCAGAAAGCTGCCCGCACTGGGCCAGCCATACATTGAAATGTGATGAC-----TCTTCTCTGTTTGTTGCAGGTTTTATCAAGTAGAGCTCTAAATTGGTTGATTCAAAGCAATGGAGTAGTTCTGTCTTACTTC--CCC-CGTGTCCAGTGTGTGATAAGAGTGTGGAGGTGAGAAGTGAGGGGCTGGGGTGGGGGAACGTGGTATGCTTGTCTGTCTGCCTGCTCCATTCAGGA---------CCTGCTGCTGGCTGGGCTCAATCT-CCCTATGTG-CAGCGTGGGTTGGCAAATGAAGCATGGCCCTGGATCCAGCCACCTCCTCAGCGGTCCTCTGCCTCA--GAGCCCTGCCAGCTGCTTCCGCAG--CACATGCAGGTTCCAGACAGGAGGAGACACAGCAATGAGGCC--GTG--GGGTCAGGGCGGCATC------------------CTGGCCTCCTGATCCCTCTTTGTCTTGTGGACATGCTACCTTGTC----ATGACTGAGATACTGAAGTT-GGGGTCACCTAGTATCAAT-GGTCACAAAGTGGGAAGGAAGGGGGTGGGGGATCAAAACCATTGCCACAAGTTCTTGGCAACCT--GCAGAGCTGACAGAAGCAGGACACTTGCTTAGACACTGGCCCTGAGGATGCTGCTTCCTCCTCCAGCTGAAAGTGGCTGGACAGA------------------------------------------------GACCACGGGGCCCAGGAATGTCCCTGCATCT-CTCAGCTGTAGGCATCCATGAGCTAATT------GTTCTTGAGGCCTAGAAGTCATTGAGGACCTACTATGATGGTCTTCAGAAGTGTC-ACCTTCAGATAAGAACAGGTGTTTGTTCCCTCAAGCAGCTAGCACTATTAA-ACAGAC--TTCCCCCCCCCcccgcagccaatattataatgaatggtgaaagactaagtaact---ccccact-aaggcagaaagaaagggaaggatttttgtttttgtttccatctcttctgtccaacaatggacaggatgctggttctagccagtgc-aaacagataaagaaaagaaatagaagagcacattttgtagaggaagaagcaaaactgtccatatttgtaggtgatg-ga-------aatagacaatccttaagaatctacaagaaaacaactagaattaacaagtggctt-tgtaacatcctgggataccatgtcagtacata---atcagttatatttctata----------------------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60976906 1766 - 77573801 taaatactttcacctaaaaaccatcccacgaggagggtattaatctttttgtg---tagatgagaaggtccagattcagaggaggtggtaagatgtccagcct---------------------------gctatccatagctggGACCTAGAACTTTGCCCACTATATACTGAAATGTCTCC-TGTCTTGGCTAGTATTTGCACCTGTGCCCCA-TCTTGTGTTTGTTTCCTGG-TCATATTAATTAGTCAGGAGGTCTATTAATTAGCATAGATTTTTGCCATTCCTAATGTCAGCTTATGTTGCTCAACTAGTACAAGGCAA-GGAAATATGGTTTCTTTTATCCAAAACAGTTCCACAGT--TCTGAGGATGAGAAGAAACCCT-GCTCAATTTTGGCTTGCTGT-----------------TTAACTTCTTTGGCCTGTAACTTGGATATAATA-------TTTGTACTTTTTGCTCTT-ATGCATCTTACCAAAGGGAAA--AGAGAGAGAGAGT-AGTTTATAGCTTCCAAAATTCTTTCATTTTCTGAGCA-TTTGCCTCCCA-ATCTGGCAGAAAATGAGCAA------GGGGACCCTCATCTTGGCTCAAAATGAAGTAGTTGTGAGGCTTCCTGAAGTCCCCATCCAGCCCCTGGAAAGCTATGACCA---GGCCATCTATATATCAAAACCCAATAGC-CTTCTCCTCTCTGCTCATAATAGGCTTCCTCAGGCAGAGCTCTAAACTTGTTTATTCAATGAAATGGAATGGTACCCTGGTGAGTCATTCCCTTAGTTCAGCAGAACACAAGAAT-------GGCAGAGTTGAGAAATG-A--GAGGGGAGACAGAGGGCGGG---------------CATGTGGAACTTGCACAACTTGC--CTGGCCCTGCTTGGTCTACCCTGTGCAGCTTTGTGTGTCTGCAAAAGAAGCATGACCCTTGTTCTG-TC--------------------------------CAGTCAGCTGCTTCCCAGC--CGTATGCGACTTCAGGACCAGAGGGGATGGAGAGATGAGGCTGGGTGCTGAGAT-CAACACTCATCTATTCAGTGCACAACTACTGGCTCTCTGGTCTGTCTTAGCCTCATGGAAATGTTTCCTTGTTAGCTA-GAATAAAGTCATGAAGCTGGAGATGGCCTCATCTTACTGGATCATAAAGTGGGGA---AGCAGA-GAAAAATTGGGACCATTGCTGGATGCTCATTATACCCCTAGTAGAG-C--------TGAGACACTGGGTGTC--TCAGCACTCAAAGGTGCTACTTCCTTCTCTGGCTGCCTGTGGCTCaaaaaaaaaaaaaaaaagaaaaagaaaagaaaaaaaaaGAGACACCAGACAGATGCTTGTGGGGCCCAGGAATGTCTCTGCATCTACC-ATTTGTAGGCATCCATGAGTCAATCAACCTGGT------CACTTGGAAGTCATTCAGAACTCATTGTGGAGGCCTTTGCAAGGGCACACCTTCAGATAAGGATAGATATTTGCTCACCCAAACAGCTAATACTATTAAAACAGCCTTT----TTTCCTTctacagtgaacattataactgattgtgaaagcctgaataact---tccctct-aaaatggaagaaaggggaagaa--tctgtttctatttttgcctcttccattc--tagtggactgg----aaattctagccagtgc-aaagagatgtggaaaagaaataaaagtatgaatatcaggaaggaagttgtgcaaatagccttatttgcaggtgatatgattaactgaatagaaaatcctaaggaaactgcaagaaaaaagcttgaatta------------tgcaacattacacaataccaagttaatatataaaaatcaattgcattcctatatacaaatgccaaatagttgcaaa i canFam3.chr6 C 0 C 0 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=2391188.000000 s hg38.chr7_KI270899v1_alt 66935 462 + 190869 catcacaggacaccaggtcaacatataaagataggttgtatttctatatactgctgatgactaatttaaaatgaagtcaaaaatactatctataatagt------aaaatcaaatacttagggataaatttcacaatatatgtg-aaaacctctacaccaaaaattat--------ctga-------gagatat--atctctaaa---tataccatgtct-------------------------------aattcttcacaaattgatctaatcattcaatgaaatctcaattggagtccctgtggac------ttttcctctaaattaacaggatgatttagaagttcatagagaa-gtgaaggtctaagggcagccacagccatc-tggaaaggaacggcaccatcagaagagttgtcaa--------------------------------atcttgcaccagtaaggccataaagaaatagctcactggcatagagcagagattacagaaataggctgacaggcaccatcccatgattttcaacaagcaggccaa s gorGor5.CYUI01015914v1 27826 458 - 432965 catcacaggacaccaggtcaacatataaagataggttgtatttctatatactgctgatgactaatttaaaatgaagt-aaaaatactatctataatagt------aaaatcaaatacttagggataaatttcacaatatatgtg-aaaacctctacaccaaaaattat--------ctga-------gagatat--atctctaaa---tataccatgtct-------------------------------aattcttcacaaattgatctaatcattcaat-aaatctc-attggagtccctgtggac------ttttcctctaaattaacaggatgatttagaagttcatagagaa-gtgaa-gtctaagggcagccacagccatc-tggaaaggaacggcaccatcagaagagttgtcaa--------------------------------atcttgcaccagtaaggccataaagaaatagctcactggcatagagcagagagtccagaaataggctgacaggcaccatcccatgattttcaacaagcaaaccaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 91531 460 + 85365473 ---------------------------------ggttgtatttctatacactactaatgactaatttaaaatgaagtgaaaaatactatctgtaatagt------aaaatcaaatacttagggataaatttcacaatatatgtg-aaaacctctacaccaaaaattat--------ctga-------gagatgt--atctctaaa---tataccatgtct-------------------------------aattcttcacaaattgatctaatcattcaatgaaatctcaattggagtccccgtggac------ttttcctctaaattaacaggatgatttagaagttcatagagac-gtgaaggtctaagggcagccatagccatc-tggagaggaacggcaccatcagaagagttgtcaagattgatgacggagctgcagggttcgtggcagatcttgcagcagtaaggccataaagaaataggtcactggaatagagcagagtgtccagaaataggctgacaggcaccatcccatgattttcaacaag-gggccaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33932256 461 + 185818997 ----------------------------------gttgtatttctatatactactgatgactaatttaaaatgatgttaaaaatactatctataatagt------aaaatcaaatacttaaggataaatttcactatatatgtgcaaaacctctacaccaaaaattat--------ctga-------gagatac--atctctaaa---tataccatgtct-------------------------------acttcttcacaagttgatctaatcattccatgaaatctcagttggagtccctgtggac------ttttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggcagccacagccatc-tgggaaggactagcaccatccgaagagttggcaagattggtgacggagctgctgtgttcatggcagatcttgcagcagtaaggccataaagaaataggtcactggaatagagcagagagtccagaagtaggctgacaggcactatcctatggttttcaacacgtgggccaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33548195 461 + 192294377 ----------------------------------gttgtatttctatatactactgatgactaatttaaaatgatgttaaaaatactatctataatagt------aaaatcaaatacttaaggataaatttcactatatatgtgcaaaacctctacaccaaaaattaT--------CTGA-------GAGATAC--ATCTCTAAA---TATACCatgtct-------------------------------acttcttcacaagttgatctaatcattccatgaaatctcaattggagtccctgtggac------ttttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggcagccacagccatc-tgggaaggaccagcaccatccgaagagttggcaagattggtgacggagctgctgtgttcatggcagatcttgcagcagtaaggccataaagaaataggtcactggaatagagcagagagtccagaagtaggctgatgggcactatcctatggttttcaacacgtgggccaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4309508 461 - 9440265 ----------------------------------gttgtatttctatatactactgatgactaatttaaaatgatgttaaaaatactatctataatagt------aaaatcaaatacttaaggataaatttcactatatatgtgcaaaacctctacaccaaaaattaT--------CTGA-------GAGATAC--ATCTCTAAA---TATACCatgtct-------------------------------acttcttcacaagttgatctaatcattccatgaaatctcaattggagtccctgtggac------ttttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggcagccacagccatc-tgggaaggaccagcaccatccgaagagttggcaagattggtgacggagctgctgtgttcatggcagatcttgcagcagtaaggccataaagaaataggtcactggaatagagcagagagtccagaagtaggctgacaggcactatcctatggttttcaacacgtgggccaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16899192 464 - 21915920 ----------------------------------gttgtatttctatatactactgatgactaatttaaaatgatgttaaaaatactatctataatagt------aaaatcaaatacttaaggataaatttcactatatatgtgcaaaacctctacaccaaaaattat--------ctga-------gagatac--atctctaaattttataccatgtct-------------------------------acttcttcacaagttgatctaatcattccatgaaatctcaattggagtccctgtggac------tcttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggcagccacagccatc-tgggaaggaccagcaccatccgaagagttggcaagattggtgacggagctgctgtgttcatggcagatcttgcagcagtaaggccataaagaaataggtcactggaatagagcagagagtccagaagtaggctgacaggcactatcctatggttttcaacacgtgggccaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 38977 461 - 21531802 ----------------------------------attgtatttctatatactactgatgactaatttaaaatgaagttaaaaatactatctataatagt------aaaatcaaatacttggggataaatttcacaatatatgtgcaaaacctctacaccaaaaattaT--------CTGA-------GGGATAC--ATCTCTAAA---TATACCatgtct-------------------------------acttcttcacaagttgatctaatcattccacgaactctcagttggagtccctgtggac------ttttcctctaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggcagccacagccatc-tgggaaggaccagcaccatccgaagagttggcaaaattggtcacggagctgccgtgttcatggcagatctcgcagcagtaaggccataaagaaataggtcactggaatagggcagagagtccagaagtaggctgacaggcaccatcccatggttttcaacatgcgggccaa i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 63063 461 - 2515279 ----------------------------------gttgtatttctatatactactgatgactaatttaaaatgatgttaaaaatactatctataatagt------aaaatcaaatacttaaggataaatttcactatatatgtgcaaaacctctacaccaaaaattat--------ctga-------gagatac--atctctaaa---tataccatgtct-------------------------------acttcttcacaagttgatctaatcattccatgaaatctcaattggagtccctgtggac------ttttcctgtaaattaacaagatgatttagaagttcatagagaa-gtgaaggtctaagggcagccacagccatc-tgggaaggaccagcaccatccgaagaattggcaagattggtgacggagctgctgtgttcatggcagatcttgcagcagtaaggccataaagaaataggtcactggaatagagcagagagtccagaagtaggctgacaggcactatcctatggttttcaacacgtgggccaa i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 219354 461 + 6586416 ----------------------------------gttgtgtttctatatactactgatgactcatttaaaatgaagttaaaaatactatctataatagt------aaaatcaaatacttagggataaatttcacaatacatgtgcaaaacctctacaccaaaaaTCCT--------CTGA-------GAGATAC--CTCTCTAAA---CATACCatgtct-------------------------------acttcttcacaagttgatctaatcgttccatgaaatctcagttggagtccctgtggac------ttttcctctaaattaacaaggtggtttagaagttcatagagaa-gtgaaggtctaagggcagccacagccgtc-tgggcaggaccagcaccatccgaagagctggtaagggtggtgacggagctgccgtgttcatggcagatctcgcagcagtaaggccatgaagaaataggtcaccggaatagagcagagagtccggaagtaggctgacaggcaccgtcccatggttttcaacacacgggccaa i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146584802 434 - 204313951 ----------------------------------------------tatactactga---ctaatttaaaataaaattttaaatgttatctataatagt------gaaatcaaata----ggaataaatttaacaatatatgtgcaaaacctctacaacaaaaattat--------ctga-------gagatat--atttctaaa---gata-tatttct-------------------------------aattcttctcaaattgagctaatccttcaatgaaatctcaattggagtccccgtggac------tttttctataaattaacgtgatgatttagaagttcatagagaaggtgaaggtctaagagtagtcacagcaatc-tggaaagaaatggcattgtcagaagagttgttaagactgatgacagagctccagtgttcatggcagatcttgtaacattatagccatagataaataggtcactggaatagagcagagagtccagaaata--------agcaccatcccattatttttgacaagtggcccaa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 421898 434 - 2125214 ----------------------------------------------tatactactgatgcctaatttaaaataaaaattaaaatgctatctataatagt------gaaatcaaata----ggaataaatttaacaaaatatttgcaaaacctctacaacaaaaattat--------ctga-------gagatat--atttctaaa---tataccgtgtct-------------------------------aattcttcacaaattgagctaatcattcaatgaaatctcaattggagtccccgtggac------tttttctgtaaattaacatgatgatgtagaagttcatagagaaggtgaaggtctaagagtagccacagcaatc-tggaaagaaatggtatcgtcagaagagttgtcaaggccgatgacggagctgcagtgttcatggcggatcttgtagcagtatggcc----gtaaataggtcactggaatagagcagagagtccagaaata--------ggcaccatcccatgatttttgacaagcagcccaa i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2164711 397 - 8137123 -----------------------------------------------------ctgctgaataattttaaaggaaattagaaata----ccacaatagtgtc-aaaaaatcaaatatttagggataaattggacaatatctgcacaacacttctatactaaacattac--------aaaacattgctgagataa--agagagaaa---tatatcatatct-tgattggaagactcatattattgggatatcaattcttcccgaattgatctaggtagtcaatgaaatctcaattgaaattccagaaggctactttttcccctataacttgaccagatagtttag-cgttcacatggcaggtaaaggtgtgagaatagccaaagacacc-ttgaaagaaagagca--gtcaagggacttgccag-------------------------------------------------------------agctttct--------gtacagagctgaggtgtatacgg------------ctgtcggtgtcagcaaa------ac i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60978672 458 - 77573801 ------------------------------------------------------------------taaaatg-----taaaatgtcatttataatagtgtcaaaaatatcaaatacctatgtatatatttaacaaatcctgtgcaaaacctctacaccaaaatctataaacattcatga-------aagatatcaaaaaggaaa---tatttcgtgtttttgattgaaggatttatgttattagaatgc-catttctcccaaattgacctgtttattcgataaaatcccaattgaaaacccagaaaac------ttt--ctataaattgccaagataattttacaattcataaggaaggcaaaggtataagaatcaccaaagcaatcttaaaaaaaactgatgaagtcaggtgacttaccaaaatttactgtaaagctgcagtatttgtgacaga-cttgcatcagtaaaactatagatga---------tagaacagag--gagaggacagaaataggctgacagattctatcaaatgatttttgacaaggaagctac i canFam3.chr6 C 0 I 28 e aotNan1.NW_018514293v1 44886 450 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1185139.000000 s hg38.chr7_KI270899v1_alt 67397 252 + 190869 aaccacagggggaaacatggtactgaaataactggatatcaggccaggcgtaggggggctcatgcctgtagtcccaggactttgggatgccaaggtgggaggattgcttgggtccagaagtttgagacgagtgtgggcaacgtcataagactctgtgtctctac-----acagagatgtaggccaggcacggaggtgcacactgaggcaggaggatcccttgagcccaggggttttaggctgcagtaagctgtgatc s gorGor5.CYUI01015914v1 28284 252 - 432965 aaccacagggggaaacatggtactgaaataactggatatcaggccaggcgtagtggggctcatgcctgtagtcccaggactttgggatgccaaggtgggaggattgcttgggcccagaagtttgagaccagcgtgggcaacgtcataagactctgtgtctctac-----acagagatgtaggccaggcacggaggtgcacactgaggcaggaggatcccttgagcccaggggttttaggctgcagtaagctgtgatc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 91991 249 + 85365473 aaccacaggggaaaa-atggtactgaaataactgggtatcaggccaggcgtagtggggctcgtgcctgtagtcccaggactttgggatgccaaggtgggaggattgcttgggcccagaagtttgagacc-gcgtgggcaacgtcataagactctgtgtctctac-----acagagacataggccaggcatggaggtgcacactgaggcaggaggatccc-tgagcccaggagttcgaggctgcagtaagccatgatc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33932717 243 + 185818997 agccgcagggggaaaaatggatccgaaataactggatatcaggccaggcacagtggggctcatgcctgtagtcccagaagttc---------aagtgggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctgtgtctttac-----acagagacataggccgggcatggaggtgcacacggaggcaggaggatcccttgagcccgggagtttgaggctgcaataagccgtgatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33548656 243 + 192294377 agccgcagggggaaaaatggatccgaaataactggatatcaggccaggcacagtggggctcatgcctgtagtcccagcagttc---------aagtgggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctgtgtctttac-----acagagacataggccgggcatggaggtgcacacggaggcaggaggatcccttgagcccgggagtttgaggctgcaataagccgtgatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4309969 243 - 9440265 agccgcagggggaaaaatggatccgaaataactggatatcaggccaggcacagtggggctcatgcctgtagtcccagcagttc---------aagtgggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctgtgtctttac-----acagggacataggccgggcatggaggtgcacacggaggcaggaggatcccttgagcccgggagtttgaggctgcaataagccgtgatc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16899656 243 - 21915920 agccgcagggggaaaaatggatctgaaataactggatatcaggccaggcacagtagggctcatgcctgtagtcccagcagttc---------aagtgggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctatgtctttac-----acagagacataggctgggcatggaggtgcacacggaggcaagaggatcccttgagcccgggagtttgaggctacaataagccgtgatc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 39438 252 - 21531802 agctgcagggggaaaaatggagccgaaataactgggtatcaggccaggcacagtggggctcatgcctgtggtcccagcagttcgggatgccaaggtgggaggattgcttgggcccagaagtttgggaccagcgtgggcaacgtcataagactctgtgtctttac-----acagagacataggccaggcatggaggtgcacacggagacagggggatcccttgagcccaggagtttgaggctgcagtaagctgtgatc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 63524 243 - 2515279 agccgcagggggaaaaatggatctgaaataactggatatcaggccaggcacagtggggctcatgcctgtagtcgcagcagttc---------aagtgggaggattgcttgggcccaaaagtttgggaccagtgtgggcaacgtcataagactctatgtctttac-----acagagacataggccgggcatggagatgcacatggaggcaggaggatcccttgagcccgggagtttgaggctgcaataagccgtgatc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 219815 251 + 6586416 agccgca-ggggaaagatggagccgaaataactgggtatcaggccaggcacagtggggctcacgcctgtggtcccagcagttcgggatgccaaggtgggaggattgcttgggcccagaagtttgggaccagcgtgggcaacgtcataagactctgtgtctccac-----acagagacataggccgggcgtggaggtgcacacggaggcaggaggatcccttgagcctgggagtctgaggctgcagtaagccgtgatc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146585236 256 - 204313951 aactgcagggggaaaagtggtactaaaataactggatatcaggccaggcatggtggggctcatacctgtagtcccagcaatttagaatgccaacgtgggaagattgctt-ggcccagaagtttgagaccagtgtggaaaacatcaaaagactctgtgtctctacaaaaaataaaaaaataggccaggcatggaggtgcacaatgaggcaggaggatcccttgagcccaggagtttgagacttcggtaagttgtgatt i calJac3.chr2 C 0 I 13 s cebCap1.NW_016107703v1 422332 256 - 2125214 aagcgcagaggggaaaatggtactaaaataactagatagcaggccaagcatggtggggctcatacttatagtcccagcactttggaatgccaacctgggaatcttgctt-agcccagaagtttgagaccagtgtgggcaacatcataagactctgtgtctctacaaaaaataaaaaaataggccaggcatggaggtgcacactgaggcaggaggatcccttgaacccaggagtttgaggctatggtaagccgtgatt i cebCap1.NW_016107703v1 C 0 I 13 s otoGar3.GL873611 2165108 91 - 8137123 acccataaaggaagagactg--ctgggata------------------------------------------------------------------gagagga------gggtctagag-------------atgg----------------ctgagtgaccgc-----ccagtgattttgacaagg------ggccaacacagt---------------------------------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979130 28 - 77573801 I e aotNan1.NW_018514293v1 44886 450 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=346787.000000 s hg38.chr7_KI270899v1_alt 67649 61 + 190869 gcagcttgggcgatagagtgagatcctgtctctaaaatataaaatatataaataaataaaa s gorGor5.CYUI01015914v1 28536 61 - 432965 gcagcttgggcgatagagtgagatcctgtctctaaaatataaaatatataaataaataaaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92240 61 + 85365473 gcagcttgcgtgatagagtgagatcctgtctctaaaatataaaatatacaaataaataaaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33932960 60 + 185818997 gcagcttgggtgacagagtgagatcctgtctctaaaatataaaatatataaataaaaaaa- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33548899 60 + 192294377 gcagcttgggtgacagagtgagatcctgtctctaaaatataaaatatataaataaaaaaa- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310212 60 - 9440265 gcagcttgggtgacagagtgagatcctgtctctaaaatataaaatatataaataaaaaaa- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16899899 60 - 21915920 gcagcttgggtgacagagtgagatgctgtctctaaaatataaaatatataaataaaaaaa- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 39690 60 - 21531802 acagcttgggcaatagagtgagatcctgtctctaaaatataaaatatataaataaaaaaa- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 63767 60 - 2515279 gcagcttgggtgacagagtgagatgctgtctctaaaatataaaatatataaataaaaaag- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220066 60 + 6586416 gcagcttgggtgatagagtgagatcctgtctctaaaatataaaatatataaataaaaaga- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146585505 59 - 204313951 gcagcctgggcgacagagt--gatcctgtctttaaaatataagacatatggataaataaaa i calJac3.chr2 I 13 C 0 s cebCap1.NW_016107703v1 422601 61 - 2125214 gcagcctgggcaacagagtgagatcatgtctctaaaatataaaacatatggataaataaaa i cebCap1.NW_016107703v1 I 13 C 0 s aotNan1.NW_018514293v1 45336 61 + 376347 gcagcctgggccacagagtgggatcctgtctctaaaatataaaacagatggataaataaaa i aotNan1.NW_018514293v1 I 450 C 0 s otoGar3.GL873611 2165199 26 - 8137123 gcagcatgggtgatggtgctaga----------------------------------aag- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979130 28 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1621135.000000 s hg38.chr7_KI270899v1_alt 67710 283 + 190869 gaaaactggatatccacatgaaaagaaa----aaagaatcttgactcctccctctcaTACCTTCGAAACTGAGAGGTTAGGCAAGGGTTTCATAGAGAAGA---------CACAAGCCATAAACTAGAAGATTGATAAACTagagtataacttac-aagggaaacgagagtgacttcatgctggagaaacctggccagcac-ac--tctgccaggtagccgaggtcaacatcagcag---tgagccgggccgaggcagg--acccctgatgtggtgggatgagaa--gcgcctcacc-tctgctctt-c s gorGor5.CYUI01015914v1 28597 280 - 432965 caaaactggat-tccacatgaaaagaaa----aaagaatcttgactcctccttctcataccTTCGAAACTGAGAGGTTAGGCAAGGGTTTCATAGAGAAGA---------CACAAGCCA-AAACTAGAAGATTGATAAACTagagtataacttac-aagggaaacgagagtgacttcatgctggagaaacctggccagcac-ac--tctgccaggtagccgaggtcgacatcagcag---tgagccgggccgaggcagg--acccctgatgtggt-ggatgagaa--gcgcctcacc-tctgctctt-c i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92301 283 + 85365473 caaaactggatatctacatgaaaagaaa----aaagaatcttgactcctccttctcataccTTCGAAACTGAGAGGTTAGGCAAGGGTTTCATAGAGAAGA---------CACAAGCCATAAAGTAGAAGATTGATAAACTGgagtacagcttac-gagggaaacgagagtgacttcatgctggagaaacctggccagcac-gc--tctgccaggtagccgaggttggcatcagcag---tgagccgggccgaggcggg--ccccccgacatggtgggatgagaa--gcgcctcacc-tctgctctt-c i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933020 263 + 185818997 ----gctggatatccacatggacagaaa----aaagaatcttgacTCCCCCTTCTCATACCTTCGAAACTGAGAGGTTAGGCAAGGGTCTCATAGAGAAGA---------CACAAGCCATAAACTAGAAGATTGATAGACTGgagtataacgtat-gagggcaacgagagtgacttcacgctggagaaagctg----------------gccaggtagccgaggtcaacatcagcag---tgagccgggccgaggcgg----cccctgacgtggtgggatgggaa--gcgcctca-c-tctgctctt-c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33548959 263 + 192294377 ----gctggatatccacatggacagaaa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGGTTAGGCAAGGGTCTCATAGAGAAGA---------CACAAGCCATAAACTAGAAGATTGATAGATTGGAGTATAACGTAT-GAgggcaacgagagtgacttcacgctggagaaagctg----------------gccaggtagccgaggtcaacatcagcag---tgagccgggccgaggcgg----cccctgacgtggtgggatgggaa--gcgcctca-c-tctgctctt-c i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310272 263 - 9440265 ----gctggatatccacatggacagaaa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGGTTAGGCAAGGGTTTCATAGAGAAGA---------CACAAGCCATAAACTAGAAGATTGATAGACTGGAGTATAACGTAT-GAgggcaacgagagtgacttcacgctggagaaagctg----------------gccaggtagccgaggtcaacatcagcag---tgagccgggccgaggcgg----cccctgacgtggtgggatgggaa--gcgcctca-c-tctgctctt-c i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16899959 263 - 21915920 ----gctggatatccacatggacagaaa----aaagaatcttgacTCCCCCTTCTCATACCTTCGAAACTGAGAGGTTAGGCAAGGGTTTCATAGAGAAGA---------CACAAGCCATAAACTAGAAGATTGATAGACTGGAGTATAACGTAT-GAgggcaacgagagtgacttcacgctggagaaagctg----------------gccaggtagccgaggtcaacatcagcag---tgagccgggccgagacgg----cccctgacatggtgggatgggaa--gcgtcttg-c-tctgctctt-c i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 39750 262 - 21531802 ----cctggatatccacatggacag-aa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGGTTAGGCAAGGGTTTTATAGAGAAGA---------CACAAGCCATAAACTAGAAGATTGATAAATTAGAGTGTAACGTAT-GAgggcaacgagagtgacttcaagctggagaaacctg----------------gcctggtagccgaggtcaacatcggcag---tgagccgggccgaggtgg----cccctgacgtggtgggatgggaa--gcgcctct-c-tcggctctt-c i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 63827 262 - 2515279 -----ctggatatccacatggacagaaa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGGTTAGGCAAGGGTTTCATAGAGAAGA---------CACAAGCCATAAACTAGAAGATTGATAGACTGgagtataacgtat-gagggcaacgagagtgacttcacgctggagaaagctg----------------gccaggtagccgaggtcaacatcagcag---tgagccgggccgaggcgg----cccctgacatggtgggatgggaa--gcgtcttg-c-tctgctctt-c i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220126 264 + 6586416 ---ccctggatatccacatggacagaaa----aaagaatcttgactcccccttctcataccTTCGAAACTGAGAGTTTAGGCCAGGGTTTCATAGAGAAGA---------CACAAGCCATAAACTAGAAGACTGATAAACTGCAGTATAACGTAT-GAGGGCAACGAGAGTGACTTCACGCTGGAGAAACCCG----------------GCCAGGTCGCCGAGGTCAACATCGGCAG---TGAGCCGGGCCGAGGCGG----CCCCTGACCTGGTGGGATGGGAA--GCGCCTCA-C-CCTGCTCTT-C i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146585564 287 - 204313951 caaaactggatatccacatgaaaagaaaatttaaaaaatcttgacacctccttctcaTACCTTTGAACCTGAGAGATTAGGCGAAGGTTTCATAGAGACGA---------CACAATCCATAAACTAGAAGATTGATAAACCAGAGCAGAACGTAC-GAGGCGaacaacggtgacttcacgctggagaaacctggtacgccc-ac--tctgccaggtagccaagctcagcatcagcag---tgagccaggccaaagccag-cacccctgatgtggtgggacgagaa--gtgcctcacc-tctcttctt-- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 422662 284 - 2125214 caaaactggatatccacatgaaaagaaaattaaaagaatcttgactcctccttctcataccTTTGAACCTGAGAGATTAGGCAAAGGTTTCACAGAGACGA---------CACAAGCCGTAAACTAGAAGATTGATAAACTGGAGTAGAACGTAT-GAGGCGAACGACGgtgacttcacgctggagaaacctggtaagccc-ac--tctgccagatagctgagctcagcgtcagcag---tgagttaggctgaagccgg-cgtccctgatgtggtgggatgagaa--gtgcctcacc-tc---tctt-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 45397 285 + 376347 caaaaCTGGATATCCACACGGAAAGAAAATTAAAAGAATCTTGACTCCTCCTTCTCATACCTTTGAACCTGAGAGATGAGGCGAAGGTTTCATAGAGAAGA---------CACAAGCCATAAACTAGAAGATTGATAAACCGGAGTAGAACGTAT-GAGGTGA---ACGgtgacttcacgctggagaaccctggtgagcgc-ac--tctgccaggtagccgagctcagcgtcggcag---tgagccgggctgaagccgg-cgccccccatgtggtgggatgagaa--gtacctcacc-tctcttcttc- i aotNan1.NW_018514293v1 C 0 I 15 s otoGar3.GL873611 2165225 263 - 8137123 ----acctttcatccacatggac---------agagaaccctggtccctacttcTCCCAGCTTCCCAGCTAAGAGGTTAGGCAAAGATTTCACAGCAAAGACTC-AAAAGCAAAAACTGTAAAACAGAAGATGGATAAACTGGAGTGTAACGTGT-GATGAGaacaagagtgactttgcagaggagagagctgacaagccc-ac-gtcggccgtgtagccatggtca-catcagcag---tgag------------------tctctg-caggacatgaccagag--gcatccagcc-cttgtggt--- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60979158 297 - 77573801 GAAAACTGAA--TCCACATTAAGAGATAATGAAGAGGGCCTTGATGACTCCTTT------CTTCTTAACTGAGgggttaggcaaagacttcataaagaaggcacaaaaagcacaaactgtaaagtagaagtttggtagattGCagtgtagtgcagaaagggggaaaagtgtcactttga---ggagaaatttgacaaacgctacctccatccaggtgatcaaggtcaacattaggagtgttgagtcatgttgacataaggcacccttggtatgatgtgatgtgaatggcaccttaccatgtgatctt-c i canFam3.chr6 I 28 C 0 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=68661.000000 s hg38.chr7_KI270899v1_alt 67993 13 + 190869 ctccaaggagccc s gorGor5.CYUI01015914v1 28877 13 - 432965 ctccaaggagccc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92584 13 + 85365473 ctccaaggagccc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933283 13 + 185818997 ctccatgaagccc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549222 13 + 192294377 ctccatgaagccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310535 13 - 9440265 ctccaagaagccc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900222 13 - 21915920 ctccatgaagccc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40012 13 - 21531802 ctctatgaagccc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64089 13 - 2515279 ctccatgaagccc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220390 13 + 6586416 CTCCATGAAGCCC i colAng1.NW_012117710v1 C 0 I 151 s calJac3.chr2 146585851 13 - 204313951 ctccatgaggccc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 422946 13 - 2125214 ctccatgaggctc i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2165488 13 - 8137123 cttctataagctt i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60979455 10 - 77573801 --ccaaaaaccc- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 45682 15 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=18798.000000 s hg38.chr7_KI270899v1_alt 68006 4 + 190869 acag s gorGor5.CYUI01015914v1 28890 4 - 432965 acag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92597 4 + 85365473 acag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933296 4 + 185818997 acag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549235 4 + 192294377 acag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310548 4 - 9440265 acag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900235 4 - 21915920 acag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40025 4 - 21531802 acag i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64102 4 - 2515279 acag i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220554 4 + 6586416 acag i colAng1.NW_012117710v1 I 151 C 0 s calJac3.chr2 146585864 3 - 204313951 aca- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 422959 3 - 2125214 aca- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2165501 4 - 8137123 acag i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60979465 4 - 77573801 ataa i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 45682 15 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=3179184.000000 s hg38.chr7_KI270899v1_alt 68010 469 + 190869 --ccggaatctgatcatgaaaaaaagacttcacacgaatcccggcagacagacact-cccccagatgcctgagcccagcttctcagaactttcaagatcacagaaaacaaggaaggtctgagaaactgtcacggcccagaggaccccaaggagatgtgacaagcaaatgtcacacgggatcctggataggatcccgg--cccacaaaacggccacccga--gaac--------aaaccaaatgaaccgtgggctttagtcaatgattatgtagcaacgtttgttcgctaattctgacaaatgtaccattataatgtaaggcattaataataagcaaactg--tg--tgaagtatatgggaacccggcactatctttataacaattctgtaaactcgaaatggctctaaaat-aaaaaaacttcattt-taaaaaaCCAGCCACAGGGGAA--GGAGGGAGATTGATAAATTGGACT------------------------------------tcaagaaaatg-gaagt s gorGor5.CYUI01015914v1 28894 470 - 432965 --ccggaatctgatcatgaaaaaaagacttcacacaaatcccggcagacagacact-cccccaaat-cctgagcccagcttctcataactttcaagatcacagaaaacaaggaaggtctgagaaagtgtcatggcccagaggaccctagggagacatgacaagcaaatgtcacaagggatcctggatgggatcccgggccccacaaaacggccacccga--gaac--------aaaccaaatgaactgtgggctttagtcaatgattatgtagcaacgtttgttcgctaattctgacaaatgtaccattataatgtaaggcattaataataaggaaactg--tg--tgaagtatatgggaacccggcactatctttataacaattctgtaaact-gaaatggctctaaaataaaaaaaacttcattt-taaaaaaCCAGCCACAGGGGAA--GGAGGGAGATTGATAAATTGGACT------------------------------------TCAAgaaaatg-gaagt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 92601 466 + 85365473 --ccggaatctgatcatgaagaaaagacttcatacgaatcccaacagacagacactccccccaaacgcctgagcccagattctcagaactttcaagatcacagaaaacaaggaaggtctgggaaactgtcacgg---------ctctagggagacgtgatgagcaaatgtcacacgggatcctggatgggatcctgg--cccagaaaacggccacctga--gaacacgga-ggaaaccaaatgaactgtgggctttagtcaatgattatgtagcaacgtttgttcactaattctgacaaatgtactgttctaatgtaaggcatcaataataaggaaaccg--tg--tgaagtatatgggaacccggcactatctttataacaattctgtaaactcaaaatggctctaaaat--aaaaaacttcattt-t-aaaaaCCAGCCACAGGGGAA--GGAGGGAGATTGATAAATTGGACT------------------------------------tcaagaaaatg-gaagt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933300 476 + 185818997 --ccagaatctggatatgaaaaaccaccttcatacaaatcccaacagacagacact-cccccaaatacctgagcccaacttctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcacagccaagagaggcctagggagatgtgatgagcaaatgtcacacgggatcctggacaggatcctgg--cccggaaaacggccacctgag-gaacacgga-ggaaaccaaatgaactgtgggcttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaaccg--ta--tgaagtatatgggaacccggcactctctttataacaattctgtgaactcgaaatggctctaaaat---aaaaacttcattt-taaaaaaCCAGCCACAGGGGAA--GGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549239 476 + 192294377 --ccagaatctggatatgaaaaaccaccttcatacaaatcccaacagacagacact-cccccaaatacctgagcccaacttctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcacagccaagagaggcctagggagatgtgacgagcaaatgtcacacgggatcctggacaggatcctgg--cccggaaaacggccacctgag-gaacacgga-ggaaaccaaatgaactgtgggcttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaaccg--ta--tgaagtatatgggaacccggcactctctttataacaattctgtgaactcgaaatggctctaaaat---aaaaacttcattt-taaaaaaCCAGCCACAGGGGAA--GGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4310552 476 - 9440265 --ccagaatctggatatgaaaaaccaccttcatacaaatcccaacagacagactct-cccccaaatacctgagcccaacttctcagaactttcaagatcatagaaaacaggaaaggtctgagaaactgtcacagccaagagaggcctagggagatgtgacgagcaaatgtcacacgggatcctggacaggatcctgg--cccggaaaacggccacctgag-gaacacgga-ggaaaccaaatgaactgtgggcttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaaccg--ta--tgaagtatatgggaacccggcactctctttataacaattctgtgaactcgaaatggctctaaaat---aaaaacttcattt-taaaaaaCCAGCCACAGGGGAA--GGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900239 476 - 21915920 --ccagaatctggatatgaaaaaccaccttcatacaaatcccaacagacagacact-cccccaaatacctgagcccaacttctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcagagccaagagaggcctagggagacgtgacgaacaaatgtcacacgggatcctggacaggatcctgg--cccagaaaacggccacctgag-gaacacgga-ggaaaccaaatgaactgtgggcttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaaccg--ta--tgaagtatatgggaacccggcactctctttataacaattctgtgaactcgaaatgactctaaaat---aaaaacttcattt-taaaaaaCCAGCCACAGGGGAA--GGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40029 476 - 21531802 --tcagaatctggacatgaaaaacagccttcatacgaatcccaacagacagacact-cccccaaatacctgagcccaacttctcagaactttcaagattgtagaaaacagggaaggtctgagaaactgtcacagccaagagaggcctagggagacgtgacgagcaaatgtcacacgggatcctggacgggatcctgg--cccggaaaacggccacccgag-gaacacaga-ggaaaccaaatgaactgtgggcttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtaccgtactgatgtaaggcactaataataaggaaaccg--ta--tgaagtatatgggaactcggcactctctttataacaattctgtgaactcgaaatggctctaaaat---aaaaacttcattt-taaaaaaCCAGTCACAGGGGAA--GGAGGGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64106 476 - 2515279 --ccagaatctggatatgaaaaaccaccttcatacaaatcccaacagacagacact-cccccaaatacctgagcccaacttctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcagagccaagagaggcctagggagacgtgacgagcaaatgtcacacgggatcctggacaggatcctgg--cccagaaaacggccacctgag-gaacacgga-ggaaaccaaatgaactgtgggcttgagttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgtactgatgtaaggcattaataataaggaaaccg--ta--tgaagtatatgggaacccggcactctctttataacaattctgtgaactcgaaatggctctaaaat---aaaaacttcattt-taaaaaaCCAGCCACAGGGGAA--GGAGAGAGATTGATAAACTGGACT------------------------------------tcaagaaaatgagaagt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 220558 477 + 6586416 --ccggaatctggacatgaaaaacagccttcacacgaatcccaacagacagatact-cccccaaatacctgagcccagcttctcagaactttcaagatcgtagaaaacagggaaggtctgagaaactgtcacagccaagagaggccttgggagacgtgacgagcacttgtcatgcgggatcctggacaggatcctgg--cccagaaaacggccacccgag-gaacatgga-ggaaaccaaacgaactgtgggcttgcgttaatgattatgtagcaacgtttgttcactaattctggcaaatgtactgaactgatgtaaggcattaataataaggaaaccg--tg--tgaagtatatgggaacccggcactctctttataacaattctgtgaactcaaaatggctgtaaaat--aaaaaacttcattt-tacaaaaCCAGCCACAGGAGAA--GGAGGGAGATTGATAAACTGGACT------------------------------------TCAAGAAAATGAGAAGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146585867 440 - 204313951 --ccagaatctgatcattagaaaaagactttgcaggaatcccaacagacagacact-cccccaaatacctgagcccaacttctcagaactttcaagatcatagaaaacagtgaaggtctgagaaactgtcacagccaggaggagcctagggagatgtgatgaccaaatgtcacatgggatcctggattggattctgg--cacagaaa------------------------ggaaatcaaataaactgtgggctttagctaatgattatataacaatatgtgttcattaattctgacaaatataccatgctaatgtgaggtattagtaatcaggaaattg--tg--tgaagtatatggga----------------ataacaattctgtaaatttgaaacgtctctaaaat-taaaaaacttcattcaaaaaaaATCGGCCACAGGGGAA---GAGGGATATTGGTAAATTGGACT------------------------------------tcaaggaaatgaaaagc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 422962 476 - 2125214 --ccggaatctgatcacaagaaaaagacttcataggaatcccaacagacagacact-cccctgaatgcctgagcccaccttctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcacagccaggaggagcctagggagatgtgacgaccaaatgtcatgtgggatcctggatgggatcctgg--cacagaaaatggccatctgag-gaacagggg-ggaaatcaaataaaccgcgggctttagctaatgattatatagcaatatgtgttcattaattctgacaaatataccatgctaatgtaaggtattaataatcaggaaatcg--tg--tgaattatatgggaactc-tcactatctttataacaattctgtaaatttgaaacatctctaaaat-taaaaaacttcattt-aaaaaaaCCAGCCACAGGGGAA---GAAGGATGTCGGTAAATTGGACT------------------------------------TCAAGgaaatgaaaagc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 45697 462 + 376347 --ccggaatctg-ccacaagaacatgacttcgtaggaatcccaacagacagacact-cccccgaatgcctgagcccaacttctcagaactttcaagatcatagaaaacagggaaggtctgagaaactgtcacagccaggaggagcctagggagatgtgacgaccagatgtcacgtgggatcctgaacgggatcctgg--cacagaaaatggccatctgag-gaacaggga-ggaaatcaaataaaccgtgggctctggctaatgattatacagcaatatgtgttcattaattctgacacata-------------ttaggtattaataatcgggaaatcg--tg--tgaagtctatgggaactc-tcactatctttataacaattctgtaaatctgaaacgtctctaaaat-taaaGAACCTCATTC-AGAAAAGCCAGACACAGGGGAA---GAGGGATATCGGTAAATTGGACT------------------------------------TCAAGGAAATGAAGAGC i aotNan1.NW_018514293v1 I 15 C 0 s otoGar3.GL873611 2165505 512 - 8137123 --ccccagtctcatcatgacaaa--gacatcacacaaaccccaacagg-ggacatt-ctcccaaacagctaagcataacttttcaacactatcaagatcacagaaaataaggagagtctgagaaactgtcacaaccaagaggagcctgaagcaacatggtgactaagtgtcctgcggagtcttggttgggatcctgg--gatagaaaaaggccaccagagagaaaatgag-gggattggaataaactgtgggctttagttaatgattatgtgccaatgttagttcattaattctaacaaacctgccacactaacgtaagacattagtaacagagaacctg--gggatgaagtctatggaaactctgcactatctttaaaactattctataaacctgaagcttttctaaaat---acaaagtttatttttacaaaagcagccataag-gag--ggaaggagattggtaaattggactttatcaaagtttaaaatgactcatcaaaaaactttctcaagaaaatgaaaagt i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60979469 473 - 77573801 tgccag--tctgatcatgaaaaa--gacataccgcaaatctcaggtgaacgata-t-ctccaaaatacttgagtactactgttcaaaactctcaagatcataaaaagtagagaacatctgagaacctatcacagccaaaaggagcctaaggagacatgaagagtaattgccatggggcatcttgactgggatcctgc--aacagaaaaaggccactaggt-aaaaactaatagaatatgaataaactacagaatttagttaataattatgtattaatattagttcattcattctgacaaacatcccaaactat--taagatgttaataataggagaactgaatg--tggggcacctggaaactt---tctgttcccataataattctgtaaacctgaaactattctaaaat--ttaaaaattcattt-ttaaaaaGCTGTAGAAGTGGTGGTGGGGGGAGATGGACAAATTGAACC------------------------------------TTATCAAAATTAAAAT- i canFam3.chr6 C 0 I 2554 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=910057.000000 s hg38.chr7_KI270899v1_alt 68479 160 + 190869 c---------attgggtgaaaatacacacaacagggacacctgatgaaagacctccgtgaagaatgtgt--------------aagcaactctggagacccagcaatcaacagactactgcccaattctaaaaaacgggcaa-agacttgagcaaacagtttggaagatacacaaatagctgat s gorGor5.CYUI01015914v1 29364 159 - 432965 c---------attgggtgaaaatacacacaacagggacacctgatgaaagacctccatgaagaatgtgt--------------aagcaactctggagacccagcaatcaacagactactgcccaattctaaaaaacgggcaa-agacttgagcaaacactttggaagata-acaaatagctgat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93067 160 + 85365473 c---------attgggtgaaaatgcacacaacagggacacctgatgaaagacctgcatgaagaatgtac--------------aagcaactctggaaacccagcagtcaacagactactgcccaattctaaaacacaggcaa-agacttgagcaaacactttggaagatacacaaatagctgat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33933776 159 + 185818997 c---------gttgggtgaaaatgcacacagcaggtacacctgatgaaagacttgcatgaagaatctac--------------cagcagctctggaaacccaacaacaaacagatt-ctacctgattctaaaaaacggacaacagccttgggcaaacacttcaaaagatacacaaaca-ctgac i rheMac8.chr3 C 0 I 79 s macFas5.chr3 33549715 159 + 192294377 c---------gttgggtgaaaatgcacacagcaggtacacctgatgaaagacttgcatgaagaatctac--------------cagcagctctggaaacccaacaacaaacagatt-ctacctgattctaaaaaacggacaacagccttgggcaaacacttcaaaagatacacaaaca-ctgac i macFas5.chr3 C 0 I 79 s macNem1.NW_012019910v1 4311028 159 - 9440265 c---------gttgggtgaaaatgcacacagcaggtacacctgatgaaagacttgcatgaagaatctac--------------cagcagctctggaaacccaacaacaaacagatt-ctacctgattctaaaaaatggacaacagccttgggcaaacacttcaaaagatacacaaaca-ctgat i macNem1.NW_012019910v1 C 0 I 119 s cerAty1.NW_012002954v1 16900715 159 - 21915920 c---------gttgggtgaaaatgcacacagcaggtacacctgatgaaagacttgcatgaagaatctac--------------cagcagctctggaaacccaacaacaaacagatt-ctacctgattctaaaaaacggacaacagccttgggcaaacacttcaaaagatacacaaaca-ctgac i cerAty1.NW_012002954v1 C 0 I 79 s chlSab2.chr28 40505 159 - 21531802 c---------gttgggtgaaaatgcacacagcaggtacacctgatgaaagacttgcatgaagaatgtac--------------cagcagctctggaaacccaccaacaaacagatt-ctacctgattctaaaaaatggacaacagccttgggcaaacacttcggaagatacacaaaca-ctgac i chlSab2.chr28 C 0 I 39 s manLeu1.NW_012101810v1 64582 159 - 2515279 c---------gttgggtgaaaatgcacacagcaggtacacctgatgaaagacttgcatgaagaatctac--------------cagcagctctggaaacccaacaacaaacagatt-ctacccgattctaaaaaacggacaacagccttgggcaaacacttcaaaagatacacaaaca-ctgac i manLeu1.NW_012101810v1 C 0 I 79 s colAng1.NW_012117710v1 221035 159 + 6586416 C---------GTtgggtgaaaatgcacacagcaggtacacctgatgaaagacttgcatgaagaatgtac--------------cagcagctctggaaacccaacaacaaacagatt-ctacctgattctaaaaaacggaaaacagccttgggt-aacacttcggaagatacacaaacagctgac i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146586307 166 - 204313951 c---------gttggatgaaaatgcacacaacaggtattcctgatgaaagacttgcattaagaatacactt-------attcttaataactatgggaacccagcaataaac--agtactacctaattctaaaaaatgggcaaaagactcaagcaaacactttggaagatacacaaatagttgat i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 423438 175 - 2125214 c---------atagggtgaaaatgcacacaacaggtattcctgatgaaagacttgcattaagaatacacttattcttaattcttaataactctggaaaaccagcaataaacagagtactatctaattctaaaaaatgggcaaaagactcgagccaacactttggaagatacacaaatagctgat i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 46159 175 + 376347 C---------ATTGGGTAAAAATGCACACAACAGGTATTCCTGATGAAAGACTTGCATTGAGAATACACttatccttaattcctaataactctggaaacccagcaatagacagagtactatctaattctaaataatgggcaaaagactcgagcaaacactttggaagatacacaaatagctgat i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2166017 158 - 8137123 caagctacagattgggtgaaaatatgcacatcggacaacccaga-gaaaggcttgtactaagactctac--------------aaacaactctggaaactcaacaacaaaaagata---gcctagtctgaaaaagtggtc--------tgagcaagcacttcagggaatgctcaaatagttgat i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979942 2554 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=228151.000000 s hg38.chr7_KI270899v1_alt 68639 34 + 190869 gagtttgaga-aaagctgctcagcctcgtagtgat s gorGor5.CYUI01015914v1 29523 34 - 432965 gagtttgaga-aaagctgctcagccttgtagtgat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93227 34 + 85365473 gagtttgaga-aaaggtgctcagcctcgtagtgat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934014 34 + 185818997 GAGTTTGAgg-aaaggtgctcagcctcgtagtgat i rheMac8.chr3 I 79 C 0 s macFas5.chr3 33549953 34 + 192294377 GAGTTTGAGG-AAAGGTGCTCAGCCTCGTAGTGAT i macFas5.chr3 I 79 C 0 s macNem1.NW_012019910v1 4311306 34 - 9440265 GAGTTTGAGG-AAAGGTGCTCAGCCTCGTAGTGAT i macNem1.NW_012019910v1 I 119 C 0 s cerAty1.NW_012002954v1 16900953 34 - 21915920 GAGTTTGAGG-AAAGGTGCTCAGCCTCATAGTGAT i cerAty1.NW_012002954v1 I 79 C 0 s chlSab2.chr28 40703 34 - 21531802 GAGTTTGAGG-GAAGGTGCACAGCCTCGTAGTGAT i chlSab2.chr28 I 39 C 0 s manLeu1.NW_012101810v1 64820 34 - 2515279 GAGTTTGAGG-AAAGGTGCTCAGCCTCGTAGTGAT i manLeu1.NW_012101810v1 I 79 C 0 s colAng1.NW_012117710v1 221194 33 + 6586416 gagtttgagg--aaggtgctcagcctcgtagtgat i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146586473 34 - 204313951 gagtttgaga-aaaggtgttcagcctgatagtgat i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 423613 34 - 2125214 gagtttgaga-aaaggtgttcagcctggtagggat i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 46334 34 + 376347 gagtttggga-aaaggcgctcagcCTGGTAGTGAT i aotNan1.NW_018514293v1 C 0 I 72 s otoGar3.GL873611 2166175 35 - 8137123 aagtttgagaaaaagaggttcaacttcttagttct i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979942 2554 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=35028.000000 s hg38.chr7_KI270899v1_alt 68673 5 + 190869 cagga s gorGor5.CYUI01015914v1 29557 5 - 432965 cagga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93261 5 + 85365473 cagga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934048 5 + 185818997 cagga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549987 5 + 192294377 CAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311340 5 - 9440265 CAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900987 5 - 21915920 CAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40737 5 - 21531802 CAGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64854 5 - 2515279 CAGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221227 5 + 6586416 caggA i colAng1.NW_012117710v1 C 0 I 221 s calJac3.chr2 146586507 5 - 204313951 cagga i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 423647 5 - 2125214 cagga i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2166210 5 - 8137123 ctgga i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979942 2554 - 77573801 I e aotNan1.NW_018514293v1 46368 72 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=397848.000000 s hg38.chr7_KI270899v1_alt 68678 100 + 190869 ----------------agtgcaactgaaaatctcagtgggacgccctgcacgcccgccaggatgc----aggcggaaagaggctgacaacacgacagt-gaggcttatgccaagcaaccgg s gorGor5.CYUI01015914v1 29562 98 - 432965 ----------------agtgcaactgaaaatctcagtgggacgccctgcacgcccgccagggtgc----aggcggaa--aggctgacaacacgacagt-gaggcttatgccaagcaactgg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93266 97 + 85365473 ----------------aatgcaactgaaaatctcagtgggacgccctgcacgcccgccagggtgg----aggtggaa--aggctgacaaca-gacagt-gaggcttatgccgagcaactgg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934053 98 + 185818997 ----------------cgtggaactggaaatatccgtggcagcccctgcacgcccgccggggtgg----aagcggaa--aggctgacaacacgacagt-gaggcttatgctggggaactgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33549992 98 + 192294377 ----------------CGTGGAACTGGAAATATCCGTGGCAGCCCCTGCACGCCCGCCGGGGTGG----AGGCGGAA--AGGCCGACAACACGACAGT-GAGGCTTATGCTGGGGAACTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311345 98 - 9440265 ----------------CGTGGAACTGGAAATATCCGTGGCAGCCCCTGCACGCCCGCCGGGGTGG----AGGCGGAA--AGGCCGACAACACGACAGT-GAGGCTTATGCTGGGGAACTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16900992 98 - 21915920 ----------------CGTGGAACTGGAAATATCCGTGGCAGCCCCTGCACGCCCGCCGGGGTGG----AGGCGGAA--AGGCCGACAACAGGACAGT-GAGGCTTATGCTGGGGAACTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40742 98 - 21531802 ----------------CGTGGAACTGGAAATATCCGTGGCAGCCCCTGCATGCCCGCCGGGGTGG----AGGCGGAA--AGGCCGACAACACGACAGT-GAGGCTTATGCCAGGGAACTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64859 98 - 2515279 ----------------CGTGGAACTGGAAATATCCGTGGCAGCCCCTGCACGCCCGCCGGGGTGG----AGGCGGAA--AGGCCAACAACACGACAGT-GAGGCTTACGCTGGGGAACTGG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146586512 98 - 204313951 ----------------agcgcaactgagcgtctcagtgggatgccctgcactcccaccagggtgg----agatggaa--aggctgacaacacaacaat-gaggcttgtaccctgcatctgg i calJac3.chr2 C 0 I 1 s cebCap1.NW_016107703v1 423652 98 - 2125214 ----------------agcgcaactgagcatctcagtgggatgccctgcactcccaccagggtgg----agacggaa--aggctgacaacacaatggt-gaggcttgtaccgtgcatctgg i cebCap1.NW_016107703v1 C 0 I 1 s otoGar3.GL873611 2166215 119 - 8137123 aatgcagagaaatggaaatgcagcagaaaatctcagacggaagctctccacgcccatcagaatggctaagatctaaa--aggctcaaagcaccaaggtgggggactgtgtggtgcatctgg i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 221232 221 + 6586416 I e canFam3.chr6 60979942 2554 - 77573801 I e aotNan1.NW_018514293v1 46368 72 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1368941.000000 s hg38.chr7_KI270899v1_alt 68778 280 + 190869 -atcct------catcgcctctggggagagcctggaatgtggccaccacttaggaccatggcttggaaatatcttaaatccaacgtatttctacATGCTAGTGATGCTGCTCATCAAGGGGGTGAGCACTC-ATGGGCTGGGGATGC-TACAGGGTCCTCAGTGCCTGCCCATTTCACAGGACAGGAGACTGAGGTCTAGAGGGAGGCA-ACAGCCAAGCACGCCCTGGATCCAACGCCTCGCCCAAGCCACCACGGCTGcctcctcctctggcccctccatctccccca s gorGor5.CYUI01015914v1 29660 277 - 432965 -atcct------c-tcgcctctgggg-gagcctggaatgtggccaccacttaggaccatggcttggaaatatcttaaatccaacgtatttctacATGCTAGTGATGCTGCTCATC-AGGGGGTGAGCACTC-ATGGGCTGGGGATGC-TACAGGGTCCTCAGTGCCTGCCCATTTCACAGGACAGGAGACTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGACGCCCTGGATCCAATGCCTCGCCCAAGCCACCACGGCTGcctcctcctctggcccctccatctccccca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93363 280 + 85365473 -atcct------catcgcctctggggagagcctggagtgtggccaccacttaggatgatggctaggaaatatcttaAATCCAATGTATTTCCCCATGCTAGTGATGCTGCTCATCATGGGGGTGAGCAGTC-ATGGGCTGGGGATGC-TACAGGGTCCTCGGTAGCTGCCCATTTCACAGGACAGGAGACTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGACGCCCTGGATCCAGCGCCTCGCCCAAGCCACCACGGCTGcctcctcctctggcccctccatctccccca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934151 275 + 185818997 -atcct------catcgcctctggg--ggacctggaatgtggcctccacttaggacaatggcttggAAATGCCTTAAATTCCATGTATTTCTACATCCTAGTGATGCTGCTCACCATGGGGGTAACCACTC-CTGAGCTGGGGATGC-CACCGGGTCCTCAGTGCCCGTTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGATGCCCTGGATCCAATGCCTCACACAAGGCACCGTGGCTGCCTGCTTCTCCGGCCCCCCCATCTTCC--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550090 275 + 192294377 -ATCCT------CATCGCCTCTGGG--GGACCTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATCCTAGTGATGCTGCTCACCATGGGGGTAACCACTC-CTGAGCTGGGGATGC-CACCGGGTCCTCGGTGCCCGTTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGATGCCCTGGATCCAATGCCTCACACAAGGCACCGTGGCTGCCTGCTTCTCCGGCCCCCCCATCTTCC--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311443 275 - 9440265 -ATCCT------CATCGCCTCTGGG--GGACCTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATCCTAGTGATGCTGCTCACCATGGGGGTAACCACTC-CTGAGCTGGGGATGC-CACCGGGTCCTCGGTGCCCATTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGATGCCCTGGATCCAACGCCTCACACAAGGCACCGTGGCTGCCTGCTTCTCCAGCCCCCCCATCTTCC--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901090 275 - 21915920 -ATCCT------CATCGCCTCTGGG--GGACCTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATCCTAGTGATGCTGCTCACCATGGGGGTAAGCACTC-CTGAGCTGGGGATGC-CACCGGGTCCTCGGTGCCCGTTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGATGCCCTGGATCCAGCGCCTCACACAAGGCACCGTGGCTGCCTCCTTCTCCGGCCCCCCCATCTTCC--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 40840 274 - 21531802 -ATCCT------CGTTGCCTCTGGG--GGGCCTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATCCTAGTGATGCTGCTCACCATGGGGGTAAGCACTC-CTGAGCTGGGGATGC-CACGGGGTCCTCGGTGCCCGTTCATTTCATGCGACAGGAGACTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGATGCCCTGGATCCAATGCCTCACACAAGGAACCGTGGCTGCCTCCTTCTCCGG-CCCCCCATCTTCC--- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 64957 274 - 2515279 -ATCCT------CATCGCCTCTGGG--GGACCTGGAATGTGGCCTCCACTTAGGACAATGGCTTGGAAATGCCTTAAATTCCATGTATTTCTACATCCTAGTGATGCTGCTCACCATGGGGGTAAGCACTC-CTGAGCTGGGG-TGC-CACCGGGTCCTCGGTGCCTGTTCATTTCATGTGACAGGAGACTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGATGCCCTGGATCCAACGCCTCACACAAGGCACCGTGGCTGCCTCCTTCTCCGGCCCCCCCATCTTCC--- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146586611 276 - 204313951 -atcct------catcgcctctgaagagagcctcaaatgtgactggcacttaggacaatggcttggaaatgtcttaaatccaacgtatttctaAATTCTAGTGA---TGCTCATCATGGGGGTGGGCACTCAAAGGACTGAGGACGCTTACAGGGTCCTCAGTGCCTGCCCATTTCACAGGACAGGAGGCTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGACGACCTGGGTACCACACCTCATCCAAGCCACCATGGCTGcctcctcctcatgcccctctatctcct--- i calJac3.chr2 I 1 I 3 s cebCap1.NW_016107703v1 423751 263 - 2125214 -atcct------catcgcctctgaagagagccttgaatgtggccgccacttaggacaatggcttggaaatgtcttaaatccaacatatttctaTATCCTAGTGA---TGCTCATTGTTGGGGTGGGGACTCAACAGACTGAGGATGC-TACAGGGTCCTCGGTGCCTGCCCATTTCACAGGACAGGAGGCTGAGGTCTAGAGGGAGGCA-ACAGCCAAGGACAACCTGGATCCCACACCTCACCCAAGcca------------cctcctcatgcccctccatctcct--- i cebCap1.NW_016107703v1 I 1 I 3 s aotNan1.NW_018514293v1 46440 273 + 376347 -ATCCT------CACCGCCTCTGAAGAGAGCCTCGAATGTGGCCACCACTTAGGACAATGGCTTGGAAATGTCTTAAATCCAA-GTATTTCTAACTCCTAGTGA---TGCTCATCGTGGGGCAGGGCACTCAACAGACTGAGGACGC-TACAGGGTCCTCGGTGCCTGCCCACTTCACAGGACGGGAGGCTGAGGCCTAGAGGGAGGCA-ACAGCCAAGGACGACCTGGATCCCACACCTCACCCAAGCCACCACGGCTGCC-cctcctcatgcccctccacctcct--- i aotNan1.NW_018514293v1 I 72 I 3 s otoGar3.GL873611 2166334 240 - 8137123 aatgctggagcacatcacagctaa---gaatatagaatgttgcagccacctaggacaagagcatggaaattctctagatccattgtatttcaatatcccagtaa---tgccCATGGGGAGCAGAAGTTCCC-AGGGACTGAGGAAGC-TGCAGAGTCCTTGGGTTCTTCCCACTCCACAGG-CAGGAGACTGAGGTCCAGAGGAAGGTGTACAGCCATGGCTGCCCTGGGTCCA-----------------------CTGCCTCCTCCTCCC------------------ i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 221232 221 + 6586416 I e canFam3.chr6 60979942 2554 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=67859.000000 s hg38.chr7_KI270899v1_alt 69058 14 + 190869 ctcctccttctccc s gorGor5.CYUI01015914v1 29937 14 - 432965 ctccttcttctccc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93643 14 + 85365473 ctccttcttctccc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934426 14 + 185818997 CTCCTTCTTCTCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550365 14 + 192294377 CTCCTTCTTCTCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311718 14 - 9440265 CTCCTTCTTCTCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901365 14 - 21915920 CTCCTTCTTCTCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41114 14 - 21531802 CTCCTTGTTCTCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65231 14 - 2515279 CTCCTTTTTCTCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221453 14 + 6586416 ctccttcttctccc i colAng1.NW_012117710v1 I 221 C 0 s calJac3.chr2 146586890 8 - 204313951 ------cttctctg i calJac3.chr2 I 3 C 0 s cebCap1.NW_016107703v1 424017 8 - 2125214 ------cttctcca i cebCap1.NW_016107703v1 I 3 C 0 s aotNan1.NW_018514293v1 46716 8 + 376347 ------cttctcct i aotNan1.NW_018514293v1 I 3 I 176 s otoGar3.GL873611 2166574 10 - 8137123 CTCCTCCTTT---- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979942 2554 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=764951.000000 s hg38.chr7_KI270899v1_alt 69072 176 + 190869 ccttgtcccccttctccttctcccac--ccctcctcctcctactc------cctcctcctcatccattgtcctccttgtcc---------------tcctt---------------atccccctccttgtcattctcctcttcctcctagtcctccttctcctcctccttctcc---tcctcttcgttctcttccttgtcctc-----------------ctcattctcctcct s gorGor5.CYUI01015914v1 29951 160 - 432965 ccttgttccccttctccttct-ccac--ccctcctcctcct-ctc---cctcctcctcctcatccattgtcctccttgtcc---------------tcct-------------------accctccttgtcattctcctcttcctccttctcctccttctcc----------------cctcctcattctcttccttgtcctc-----------------cttattctcctcct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93657 185 + 85365473 ccttgtcgcccttctccgtct-ccca--ccctcctactcct-ctccctcctcctcctcctcattcgtcgttctcctcatcc---------------tccttgtccctctcttcctcatccccctccttgtcattctcctcttcctcctcgtcctccttctcc---------------ccctcctcattctcttccttctccct---------------gactcattctcctcct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934440 204 + 185818997 CCTTGTCCCCCTTCTCCCTCTCCCAC--Ccctcctcctcct-ctc---cctcctcctcctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattctcctcctcctcctagtcctccttctcctcctccttatccctcttctccctgttctcttccttgtcctcattctcctcctccctgactcattctccttct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550379 204 + 192294377 CCTTGTCCCCCTTCTCCCTCTCCCAC--Ccctcctcctcct-ctc---cctcctcctcctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattctcctcctcctcctagtcctccttctcctcctccttatccctctcctccctgttctcttccttgtcctcattctcctcctccctgactcattctccttct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4311732 204 - 9440265 CCTTGTCCCCCTTCTCCCTCTCCCAC--Ccctcctcctcct-ctc---cctcctcctcctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattctcctcctcctcctagtcctccttctcctcctccttatccctctcctccctgttctcttccttgtcctcattctcctcctccctgactcattctccttct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901379 204 - 21915920 CCTTGTCCCCCTTGTCCCTCTCCCAC--Ccctcctcctcct-ctc---cctcctcctcctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattctcctcctcctcctagtcctccttctcctcctccttatccctctcctccctgttctcttccttgtcctcattctcctccttcccgactcattctccttct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41128 200 - 21531802 CCTTGTCCCCCTTCTCCCTCTCCCAC--CCCTCCTCCTCCT-CTC---CCTCCTCCTCCTCATCCATTCTCCTCCTTGTCC---------------CTCT---------CTTCCTCATCCCCC----TGTCATTCTCCTCCTCCTCTTAGTCCTCCTTCTCCTCCTCCTTATCCCTGTCCTCCCCATTCTCTTCCTTGTCCTCATTCTCCTCCTCCCCGACTCATTCTCCTTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65245 201 - 2515279 CCTTGTCCCCCGTCTCCCTCTCCCAC--Ccctcctcctcct-ctc---cctcctcctcctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattcttctcctcctcctagtcctc---ctcctcctccttatccctctcctccctgttctcttccttgtcctcattctcctcctccccgactcattctccttct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221467 192 + 6586416 ccttgtcccccttctccctctccca-----ctccccctcct-ctc---cctcctcctcctcatccgttctcctccttgtcc---------------ctct---------cttcctcatccccctccttgtcattcttctcctcctcctagtcctccttctc---------atctccctcctccccattctcttccttgtcctcattctcctcctccccgactcattctccttct i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146586898 188 - 204313951 ccttgtctcccctctccttctcccactgccctcctcctctt-cct---ct------tcctcatccattctc---cttgtctgcttcttcatcctcgccct---------cttcctcatccccctcctagtcattctcctcct-ctcctaatcctccttctcttcctcttct------ccctcctcattctcatccttgtcctc-----------------ctcgtcctcttcct i calJac3.chr2 C 0 I 4 s cebCap1.NW_016107703v1 424025 197 - 2125214 ccttgtcccccttctccttctcccactaccctcttcctctt-cct---cttcctcctcctcatccattctccttcttgtctgcttcctcaccctcaccct---------cttcctcatccccctccttgtcattctcctcct-ctcctagtcctccttctcctcctcttct------cactcctcattctcgtccttgtcctc-----------------ctcgtcctcttcct i cebCap1.NW_016107703v1 C 0 I 39 s otoGar3.GL873611 2166584 67 - 8137123 ----------------------------CCTTTTTACTTCT-CTC---------------------------TTCATGTCC---------------CCCC---------CATCCCTATACCcctccccctctttcttttacttcttc--------------------------------------------------------------------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979942 2554 - 77573801 I e aotNan1.NW_018514293v1 46724 176 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=8196.000000 s hg38.chr7_KI270899v1_alt 69248 3 + 190869 tct s gorGor5.CYUI01015914v1 30111 3 - 432965 tct i gorGor5.CYUI01015914v1 C 0 I 291 s nomLeu3.chr20 93842 3 + 85365473 tct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934644 3 + 185818997 tca i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33550583 3 + 192294377 tca i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4311936 3 - 9440265 tca i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16901583 3 - 21915920 tca i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 41328 3 - 21531802 TCA i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 65446 3 - 2515279 tca i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 221659 3 + 6586416 tca i colAng1.NW_012117710v1 C 0 I 1 e otoGar3.GL873611 2166651 0 - 8137123 C e canFam3.chr6 60979942 2554 - 77573801 I e aotNan1.NW_018514293v1 46724 176 + 376347 I e cebCap1.NW_016107703v1 424222 39 - 2125214 I e calJac3.chr2 146587086 4 - 204313951 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=72193.000000 s hg38.chr7_KI270899v1_alt 69251 61 + 190869 -ccccgattcctcctccttctccccgactcctcctccttca---------------------------------------------------cctcctccttgtcctc---------------ctccc s gorGor5.CYUI01015914v1 30405 61 - 432965 -ccccgactcctcctccttctccccgactcctcctccttca---------------------------------------------------cctcctccttgtcctc---------------ctccc i gorGor5.CYUI01015914v1 I 291 C 0 s nomLeu3.chr20 93845 47 + 85365473 -ccccaactcctccccctt-----------------cttca---------------------------------------------------cctcctcctcgtcctc------------cttctccc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934648 74 + 185818997 -ctcctccttgtcctccttctccct--ctcttcctcctcat---------------------------------------------------cctcctccttgtcctcttcttcctcctcctcatccc i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33550587 74 + 192294377 -ctcctccttgtcctccttctccct--ctcttcctcctcat---------------------------------------------------cctcctccttgtcctcttcttcctcctcctcatccc i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4311940 74 - 9440265 -ctcctccttgtcctccttctccct--ctcttcctcctcat---------------------------------------------------cctcctccttgtcctcttcttcctcctcctcatccc i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16901587 122 - 21915920 -ctcctc---gtcctccttctccct--ctcttcctcctcatcctcctccttgtcctcttcttcctcctcctcatccctgtcctcctcctcatcctcctccttgtcctcttcttcctcctcctcatccc i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 41332 31 - 21531802 -CTCCTCCTTGCcctccttctccct--ctcctcc---------------------------------------------------------------------------------------------- i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 65450 74 - 2515279 -ctcctccttgtcctccttctccct--ctcttcctcctcat---------------------------------------------------cctcctccttgtcctcttcttcctcctcctcatccc i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 221663 31 + 6586416 -ctcctccttgttctccttctccct--ctcctcc---------------------------------------------------------------------------------------------- i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chr2 146587090 44 - 204313951 -CTCCCCCTAATTctccttcgccac--ctcttccttgttct---------------------------------------------------tctcct------------------------------ i calJac3.chr2 I 4 C 0 s otoGar3.GL873611 2166651 21 - 8137123 cctcccccttgtccttccttc----------------------------------------------------------------------------------------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979942 2554 - 77573801 I e aotNan1.NW_018514293v1 46724 176 + 376347 I e cebCap1.NW_016107703v1 424222 39 - 2125214 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=300021.000000 s hg38.chr7_KI270899v1_alt 69312 94 + 190869 tctcctcctcctc---------------------ctccttgtcttcttcttcctcctcctcatccccctcttcctcttcctaattctcctcctctgcctcctccttgtcctctcc s gorGor5.CYUI01015914v1 30466 100 - 432965 tctcctgctcctcatcctc---------------ctccttgtcttcttcttcctcctcctcatcctcctcctcctcttcctaattctcctcctctgcctcctccttgtcctctcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93892 100 + 85365473 tctcctcctccccatcctc---------------ctccttgtcctcttcttcctcctgttcatccccctcctcctcttcctaattctcctcctctacctcctccttgtcctctgc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934722 79 + 185818997 tgtcctcctcctcatcctc---------------ctccttgtcctcttcttcctcctcctcatccctctcctcc---tcctAATTCTCC------------------TCGTCTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550661 79 + 192294377 tgtcctcctcctcatcctc---------------ctccttgtcctcttcttcctcctcctcatccctctcctcc---tcctAATTCTCC------------------TCGTCTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312014 79 - 9440265 tgtcctcctcctcatcctc---------------ctccttgtcctcttcttcctcctcctcatccctctcctcc---tcctAATTCTCC------------------TCGTCTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901709 79 - 21915920 tgtcctcctcctcatcctc---------------ctccttgtcctcttcttcctcctcctcatccctctcctcc---tcctAATTCTCC------------------TCGTCTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41363 71 - 21531802 --------tcctcatcctc---------------ctccttgtcctcttcttcctcctcctcatccctctcctcc---tcctAATTCTCC------------------TCATCTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65524 79 - 2515279 tgtcctcgtcctcatcctc---------------ctccttgtcctcttcttcctcctcctcatccctctcctcc---tcctAATTCTCC------------------TCGTCTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221694 71 + 6586416 --------tcctcatcctc---------------ttccttgtccccttcctcctcctagtcatccccctcctcc---tcctaattctcc------------------tcctctcc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587134 64 - 204313951 ------aattcacctcctt---------------gtccttgccttcc---------tcctcattctcctccactgcatcctccttgtcc------------------tcacc--- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 424261 94 - 2125214 tctcctaattctcctccttgtccgaagcctcctcgtccttgccttcctcttcctcttcctcattctcctccgccacctcctccttgtcc------------------tcGCC--- i cebCap1.NW_016107703v1 I 39 I 15 s otoGar3.GL873611 2166672 64 - 8137123 ---------ccccttcctc---------------ttcc-------ctccttcctcctcttcattttcctcctcccttcccctgctctcc------------------tcctcc-- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979942 2554 - 77573801 I e aotNan1.NW_018514293v1 46724 176 + 376347 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=115315.000000 s hg38.chr7_KI270899v1_alt 69406 26 + 190869 ctcccccttgtcctcctcgtcttcct s gorGor5.CYUI01015914v1 30566 26 - 432965 ctcccccttgtcctcctcgtcttcct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 93992 26 + 85365473 ctcccccttgtcctcctcgtcttcct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934801 26 + 185818997 CTCCTGCTTGTCCTCCTTGTCTTCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550740 26 + 192294377 CTCCCGCTTGTCCTCCTTGTCTTCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312093 26 - 9440265 CTCCCGCTTGTCCTCCTTGTCTTCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901788 26 - 21915920 CTCCCGCTTGTCCTCCTTGTCTTCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41434 26 - 21531802 CTCCCGCTTGTCCTCCTTGTCTTCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65603 26 - 2515279 CTCCCGCTTGTCCTCCTTGTCTTCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221765 26 + 6586416 ctcccccttgtcctcctcgtcttcct i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587198 25 - 204313951 tccccccttatcctcctcatctttc- i calJac3.chr2 C 0 C 0 s otoGar3.GL873611 2166736 9 - 8137123 -----------------tgccttcct i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979942 2554 - 77573801 I e aotNan1.NW_018514293v1 46724 176 + 376347 I e cebCap1.NW_016107703v1 424355 15 - 2125214 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=438860.000000 s hg38.chr7_KI270899v1_alt 69432 63 + 190869 tttcttcctcctcttcTGTCCCAGGGCTTTCAAACTCTGGCTCTCCA----------ACGACATGGAAGAGTT s gorGor5.CYUI01015914v1 30592 63 - 432965 tttcttcctccccttctGTCCCAGGGCTTTCAAACTCTGGCTCTCTA----------ACGACATGGAAGAGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94018 63 + 85365473 tttcttcctcctcttcTGTCCCAGGGCTTTCAAACTCTGGCTCTCTA----------ACGACATGGAAGAGTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934827 63 + 185818997 TTTCTTCATCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTCTCCA----------ACGACATGGAAGAGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550766 63 + 192294377 TTTCTTCATCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTCTCCA----------ACGACATGGAAGAGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312119 63 - 9440265 TTTCTTCATCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTCTCCA----------ACGACATGGAAGAGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901814 63 - 21915920 TTTCTTCATCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTCTCCA----------ACGACATGGAAGAGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41460 63 - 21531802 TTTCTTCGTCCTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTCCCCA----------ACGACATGGAAGAGTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65629 63 - 2515279 TTTCTTCATCCTCTTCTGTCCCACTGCTTTCAAACTCTGGCTCTCCA----------ACGACACGGAAGAGTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221791 63 + 6586416 TTTCTTCGTCTTCTTCTGTCCCAGTGCTTTCAAACTCTGGCTCTCCA----------ACGACATGGAGGAGTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587223 63 - 204313951 tttcttcctcctcttccATCCCAATGCTTTCAAACACTGGCTCTCTA----------ATGGCATAGAAGAGTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 424370 63 - 2125214 TTTCTTCCTCCTCTTCCATCCCAATGCTTTCAAACACTGTCTCTCTA----------ATGACATGGAAGAGTT i cebCap1.NW_016107703v1 I 15 C 0 s aotNan1.NW_018514293v1 46900 62 + 376347 tttcttcctcctcttccgtccCATTGCTTTCAAACACTGGCTCTCCA----------ATGGCAT-GAAGAGTT i aotNan1.NW_018514293v1 I 176 C 0 s otoGar3.GL873611 2166745 73 - 8137123 cccccttctcctccCCTGTCCCAGAGCTTTCAAGCTCAGGCTCCCCAGAGCCTACTGATGACACAGAGGAATT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60979942 2554 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=3295140.000000 s hg38.chr7_KI270899v1_alt 69495 426 + 190869 AAAAGGAGGAACGCCGGCTCAGC-CAAGCCCCGGAGACTCCTACTTGATATGGGCAGTTTAAAGCCACTTTCCCTTTAAATTTTTCTGTGACAA---CTCTTTTCATGGAGAAT-GGAAAGACTCTCGTTAAGTGTTGCCGTtcagaagtgttggtggtcgttgctaacatgagatccaacaaggtaaatgccagaagccatctgcaAGGGGTAATACCTTATTCTGCTTTTGCATAAGTGATGCTGCAT--CCCTTTATCTCTCTGCTGC-GGCCTTCAGTGCTGATGGCCTGTGCCACCCAGTGACTGGTTAAATCAGCTTGAGGAAGAGCTCTTTTGAGCCTCTGTCCTGTTTAGCAGAG-GAAACTTCAAAGTCCCAGCATCCTGGTCATGGAATGCTATGT-TAACCCTTTCCAAAGTTTGAGACTGAGAT s gorGor5.CYUI01015914v1 30655 424 - 432965 AAAAGGAGGAACGCCGGCTCAGC-CAAGCCCCGGAGACTCCTACTTGATATGGGCAGTTTAAAGCTGCTTTCCCTTTAAATTTTTCTGTGACAA---CTCTTTTCATGGAGAAT-GAAAAGACTC--GTTAAGTGTTGCCCTtcagaagtgttggcggtcgttgctaacatgagatccaacaaggtaaatgccagaagccatctgcaAGGGGTAATATCTTATTCTGCTTTTGCATAAATGATGCTGCAT--CCCTTTATCTCTCTGCTGCCGGCCTTCAGTGCTGATGGCCTGTGCCACCCAATGACTG-TTAAATCAGCTTGAGGAAGAGCTCTTTTGAGGCTCTGTCCTGTTTAGCAGGG-GAAACTTCAAAGTCCCAGCATCCTGGTCATGGAATGCTATGT-TAACCCTTTCCAAAGTTTGAGACTGAGAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94081 420 + 85365473 AAAAGGAGA------TGCTCAGC-CAAGCCCC-GAGACTCCTACTTGATATGGGCAGTTTGAAACCACTTTCCCGTGACATTTTTCTGTGACAA---CTCTTTTCATGGAGAAT-GAAAAGACTCTCGTTAAGCGTTGCTGTTCAGAAGTGTTGGCGGTCGTTGCTAACACAAGATCCAACAAGGTAAATGCCAGAAGCCATCTGCAAGGGGTAATATCTTATTCTGCTTTTGCATAAATGATGCTGCAT--CCCTTTATCTCTCTGCTGCCGGCCTTCAGTGCTGACGGCCTGTGCTACCCAATGACTGGTTCCATCATCTTGAGGAAGGGCTCTTTTGAGGCTCTGTCCTGTTTAGCAGGG-GAAACTTCAAAGTCTCAGCAGCCTGGTCATGGAATGCTATGT-TAGCTCTTTCCAAAGTTTGAGACTGAGAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33934890 427 + 185818997 AAACGGAGGAACGCCAGCTCAGC-CAAGCCCCAGAGACTCCTACTTGATGTGGGCAGTTTAAAACCACTTTTCCACTAAATTTTTCTGTGACAA---CTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTtcagaagtgttggcggtcgttgctaacatgagatccaacaaggtaaatgccaggagccatctgcaAGGGGTAATACCTCATTCTGCTTTTGCCTAAATGATGCTGCAT--CCCTTTATCTCTCTGCTGCCGGCCTTCGGTGCTGAGGGCCTCTGCCACCCAGTGACTGGTTAAATCAGCTTGGGGAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGCATCCTGGTCATGGAATGCTATGT-TAGCTCTTTCCAAAGTTTGAGACTGAGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33550829 427 + 192294377 AAACGGAGGAACGCCAGCTCAGC-CAAGCCCCAGAGACTCCTACTTGATATGGGCAGTTTAAAACCACTTTTCCATTAAATTTTTCTGTGACAA---CTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTTCAGAAGTGTTGGCGGTCGTTGCTAACATGAGATCCAACAAGGTAAATGCCAGGAGCCATCTGCAAGGGGTAATACCTCATTCTGCTTTTGCCTAAATGATGCTGCAT--CCCTTTATCTCTCTGCTGCCGGCCTTCGGTGCTGAGGGCCTCTGCCACCCAGTGACTGGTTAAATCAGCTTGGGGAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGCATCCTGGTCATGGAATGCTATGT-TAGCTCTTTCCAAAGTTTGAGACTGAGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312182 427 - 9440265 AAACGGAGGAACGCCAGCTCAGC-CAAGCCCCAGAGACTCCTACTTGATATGGGCAGTTTAAAACCACTTTTCCATTAAATTTTTCTGTGACAA---CTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTtcagaagtgttggcggtcgttgctaacatgagatccaacaaggtaaatgccaggagccatctgcaAGGGGTAATACCTCATTCTGCTTTTGCCTAAATGATGCTGCAT--CCCTTTATCTCTCTGCTGCCGGCCTTCGGTGCTGAGGGCCTCTGCCACCCAGTGACTGGTTAAATCAGCTTGGGGAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGCATCCTGGTCATGGAATGCTATGT-TAGCTCTTTCCAAAGTTTGAGACTGAGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16901877 427 - 21915920 AAATGGAAGAACGCCAGCTCAGC-CAAGCCCCAGAGACTCCTACTTGATATGGGCAGTTTAAAACCACTTTTCCATTAAATTTTTCTGTGACAA---CTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTtcagaagtgttggcggtcgttgctaacatgagatccaacaaggtaaatgccaggagccatctgcaAGGGGTAATATCTCATTCTGCTTTTGCCTAAATGATGCTGCAT--CCCTTTATCTCTCTGCTGCCGGCCTTCGGTGCTGAGGGCCTCTGCCACCCAGTGACTAGTTAAATCAGCTTGGGGAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGCATCCTGGTCATGGAATGCTACGT-TAGCTCTTTCCAAAGTTTGAGACTGAGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41523 411 - 21531802 AAACGGAGGAACGCCAGCTCAGC-CAAGCCCCAGAGACTCCTACTAGATATGGGCAGTTTAAAACCACTTTTCCATTAAATTTTTCTGTGACAA---CTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTTCAGAAGTGTTGGCGGTCGTTGCTAACACGAGATCCAACAAGGTAAATGCCAGGAGCCATCTGCAAGGGGTAATACCTCACGCTGCTTTTGCCTAAATGATGCTGCAT--CCCTTTATCTCTCTGCTGCCGGCCTTCAGTGCTGGGGGCCTGTGCCGCCCAGTGACTGGTTAAATCAGCTTGGGGAAGGGCT----------------CTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGCATCCTGGTCATGGAATGCTATGT-TAGCTCTTTCCGAGGTTTGAGACTGAGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 65692 427 - 2515279 AAACGGAGGAACGCCAGCTCAGC-CAAGCCCCAGAGACTCCTACTTGATATGGGCAGTTTAAAATCACTTTTCCATTAAATTTCTCTGTGACAA---CTCTTTTCGTGGAGAAT-GAAAAGACTCTCGTTAAGTGTTGCTGTtcagaagtgttggcggttgttgctaacacgagatccaacaaggtaaatgccaggagccatctgcaAGGGGTAATACCTCATTCTGCTTTTGCCTAAATGATGCTGCAT--CCCTTTATCTCTCTGCTGCCGGCCTTCGGTGCTGAGGGCCTCTGCCACCCAGTGACTGGTTAAATCAGCTTGGGGAAGAGCTCTGTTAAGGCTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGCATCCTGGTCATGGAATGCTATGT-TAGCTCTTTCCAAAGTTTGAGACTGAGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 221854 427 + 6586416 AAACGGAGGAACGCCGGCTCAGC-CAAGCCCCGGAGACTCCTACTTGATATGGGCAGTTTAAAACCACTTTTCCATTAAATTTTTCTGTGACAA---CTCTTTTCATGGAGAAT-GGAAAGACTCTCATTAAGTGTTGCTGTTCAGAAGTGTTGGCGGTCGTTGCTAACACGAGATCCAACAAGGTAGATGACAGGAGCCACCTGCAAGGGGTAATACCTCATTCTGCTTTTGTCTAAATGATGCTGTAT--CCCTTTACCTCTCTGCTGCCGCCCTTTGGTGCTGGGGGCCTGTGCCACCCAGTGACCGGTTAAATCAGCTTGGGGAAGAGCTCTGCTGAGACTCTGTCCTGCTTAGCAGGG-GAAACTTCAGAGTCTCAGCATCCTGGTCATGGAATGCTATGT-TAGCTCTGTCCGAGGTTTGAGACTGAGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587286 426 - 204313951 AAAAGGAGGAACA--GGCTCATC-CAAGCCCCAAAGACACCTACTTGATATGGGCAGCTTAAAACCGCTTTCCCATTAAATTTTTCTGTGACAA---CTCTTTTCATGGAGAAT-GAAAAGACTCTTGTGAAGTGTTGCTGTTAGGAAGTGTTGGCGGTCGTTGCTAACATGAAATCCAACAAGGTAAATGCCAGGAGCCATCTGCAGGCAGTAATATCTTATTCTGCTTTTGCATAAATGATGCTGTGT--CCTTTTATTTCTCTGCTGCTTGCCTTCAGTGCTGATGGCCTGTGCCCCCCAGTGACTTGTTAAATCAGCTTGGGGAATAGCTCTTTTGAGGCTCTGTCCTGTTTAGCAGGGGGAGACTTCAAAGTCTCAGCATCCTGGTCATGGAAGGCTACAT-CAGCTCTTTCCAAAGTTTGAGACTGAGAT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 424433 426 - 2125214 AAAAGAAGGAACG--GACTAAGC-CAAGCCCCAGAGACTCCTACTTGATATGGGCAGCTTAAAACCGCTTTCCCATTAAATTTTTCTGTGACAA---CTCTTTTCACGGAGAAT-GAAAAGACTGTCATTAAGTGTTGCTGTtcggcagtgttggcggtcgttgctaacatgagatccaacaaggtaaatgccaggagccatctgcaGCCACTAATATCTTACTCTGCTTTTGCATAAATGATGCTGCGT--CCCTTTATCTCTCTGCTGCCGGCCTTCAGTGCTGATGGCCTGTGCCACCCAGTGACTGGTTAAATCAGCTTGGGGAAGAGCTCTTTTGAGGCTCTGTTCTGTTTAGCAGGGAGAGACTTCAAAGTCTAAGCATCCTGGTCATGGAAGGCTATGT-CAGCTCTTTCCAAAGTTTGAGACTGAGAT i cebCap1.NW_016107703v1 C 0 I 8702 s aotNan1.NW_018514293v1 46962 425 + 376347 AAAAGGAGGAACA--GGCTCAGC-CAAGCCCCAGAGACTCCCACTTGATGTGGGCAGCTTAAAACCGTTTTCCCACTAGATTTTTCTGTGACAG---CTCTTTTCATGGAGAAT-GAAAAGACTCTTGTTGCGTGTTGCTGTTGGGAAGTGTTGGCTGTCGTTGCTAACATGAGATCCAACAAGGTAAACGCCGGGAGCCACCCGCAGGCACTAATACCTTATTCTGCTTTTGCATAAACGATGCTGCGT--CCCTTTATCTCCCTGCTGCCGGCCTTCAGTGCTGCCGGCCTGGGCCACCCAGTGACTGGTGAAATCAGCTTGGGGAA-AGCTCTTTTGAGGCTCTGTCCTGTTTAGCAGGGGGAGACTTCAAAGTCTCAGCATCCCGATCATGGAAGGCTACGT-CAGCTCTTTCCAAACTTCGAGACTGAGAT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2166818 427 - 8137123 AAAAGGAGGAATACAAACTCAGC-CAAGCCCTGGAGACTCCTGCTTGATATGGGCAGCTTAAAACTACTTTTCCTTTACATTTTTCTGTGACAA---CTCTTTTCGTGAAGAATCAAAAAGACTCTCATTAAGTCTTGCTGTTCAGAAGTGTCAGCCGGGGTTGCTAACATGAGATTCAGCAA-GCAAATGCCAGGAGCCATCTGCGAGGGGTAATATTTCATTCCGCTTTTGCATAAATGATGCTAC-C--CCCTTTATCTCTGGGCTGCCTGCCTTCAGTGCTGACAGCCTGTCCTGCCCAATGACTAGTACAGTCAGCCCGGGGAAGGGCTTCATTACGGCTCTGTTGTATTTAACAAGGGGTAACTTCAAAGTCCCAGCATCCCTTTCGAGAAATGCAAAGT-TAGCTCTTTCCGAAGTTGGACACTGATGT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60982496 429 - 77573801 AAAAGCAGGAGTCTAGGCTCAGCATAAGACCTAGAGATCCCTGCTTGATATGGACAGTTTAACACTCCTTTCCCATTCAATTTTTCTATGGCACTATTTTTTTTTGTGATGAAT-CAAAAGACTCTTGTTCAGTCTTGCTGTTCAGAAGTGTTGGCTGAGATGACGAACATGAGATTCAGTGAGGAAAATGCCAGAATCCATCTGTGAGGGCTAATAGCTCATTCTGTTTTTGCATAAGTGATGCTGTGTCCCCCTTCATCTCCCTGCTGCCTGCTGCCAGTGCTGATAGCAGGTCCCCCTCGGTGACT----AAATCAAC-TGAGCGAGAGCCCTATCATGGC-ATGGCATGCTTAGCAGGGCGAAACTTCAAAGTCCTAGCATCCTAGTCATAGAATGCAAAGTATAGTTCTTTCCCAAGTTTTAGAGTGAAGC i canFam3.chr6 I 2554 C 0 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=119963.000000 s hg38.chr7_KI270899v1_alt 69921 14 + 190869 GGGCAGACCATTTT s gorGor5.CYUI01015914v1 31079 14 - 432965 GGGCAGACCATTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94501 14 + 85365473 GGGCAGACCATTTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935317 14 + 185818997 GGGCAGACCATTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551256 14 + 192294377 GGGCAGACCATTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312609 14 - 9440265 GGGCAGACCATTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902304 14 - 21915920 GGGCAGACCATTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41934 14 - 21531802 GGGCAGAGCATTTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66119 14 - 2515279 GGGCAGACCATTTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 222281 14 + 6586416 GGGCAGACCATTTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587712 14 - 204313951 GGGCAGACCATTTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 433561 14 - 2125214 gggcagACCATTTT i cebCap1.NW_016107703v1 I 8702 C 0 s aotNan1.NW_018514293v1 47387 14 + 376347 GGGCAGACCGTTTT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2167245 14 - 8137123 GGGCAGGGTGCTGT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60982925 14 - 77573801 AGGCAGGCCATTTT i canFam3.chr6 C 0 I 400 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=50453.000000 s hg38.chr7_KI270899v1_alt 69935 7 + 190869 AAAG--ACA s gorGor5.CYUI01015914v1 31093 7 - 432965 AAAG--ACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94515 7 + 85365473 AAAG--ACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935331 7 + 185818997 AAAG--ACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551270 7 + 192294377 AAAG--ACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312623 7 - 9440265 AAAG--ACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902318 7 - 21915920 AAAG--ACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41948 7 - 21531802 AAAG--ACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66133 7 - 2515279 AAAG--ACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 222295 7 + 6586416 AAAG--ACA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146587726 7 - 204313951 AAAG--ACA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 433575 7 - 2125214 AAAG--ACA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 47401 7 + 376347 AAAG--ACA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2167259 9 - 8137123 AAAGTTGCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60982939 400 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1028974.000000 s hg38.chr7_KI270899v1_alt 69942 143 + 190869 CACTGCATCCAGCCTCCCATGACAGAGCCTCAT------GGGAAGGGTGGTGAGCAGAGTCGT---GGGGATATTCTATCCTGAGCCTTCCATGTTGGGGCTTCTCGGAGACAGGGGAGGACCACAGCCTCAGTGACTGGCCATTGGCCAAA s gorGor5.CYUI01015914v1 31100 143 - 432965 CACTGCATCCAGCCTCCCATGACAGAGCCTCAT------GGGAAGGGTGGTGAGCAGGGTAGT---GGGGATATTCTATCCTGAGCCTTCCATGTTGGGGCTTCTCGGAGACAGGGGAGGATCACAGCCTCACTGACTGGCCATTGGCCAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94522 142 + 85365473 CACTGCATCTAGCCTCCCATGACAGAGCCTCAT------GGGAAGGGTGGTGAGCAGGGTCGT----GGGATATTCTATCCTGAGCCTTCCACGTTGGGGCTTCTTGGAGACAGGGGAGGACCACGGCCTCAGTGACTGGCCATTGGCCAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935338 149 + 185818997 CACTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGT---GGGGATTTTCTATCCTGAGCCTTCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATTGGCCAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551277 149 + 192294377 CGCTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGT---GGGGATTTTCTATCCTGAGCCTTCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATTGGCCAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312630 149 - 9440265 CGCTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGT---GGGGATTTTCTATCCTGAGCCTTCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATTGGCCAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902325 149 - 21915920 CGCTGCATCTAGCCTCCCATGACAGAACCTCATGGGAAGGGGAAGGGTGGTGAGCAGGGTCGT---GGGGATTTTCTATCCTGAGCCTTCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATTGGCCAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 41955 149 - 21531802 CGCTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTTGT---GAGGATTTTCTATCCTGGGCCTTCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCGCAGCCTCAGTGACTGGCCATTGGCCAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66140 149 - 2515279 CGCTGCATCTAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGT---GGGGATTTTCTATCCTGAGCCTTCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATTGGCCAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 222302 149 + 6586416 GGCTGCATCCAGCCTCCCATGACAGAGCCTCGTGGGAAGGGGAAGGGTGGTGAGCAGGGTCGT---GGGGATTTTCTATCCTGAGCCTTCCATGTTGGGGCTTCTTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATTGGCCAAA i colAng1.NW_012117710v1 C 0 I 24 s calJac3.chr2 146587733 138 - 204313951 CATAGCATCTAGGCTCC-----CTGAGCCTCAT------GGGAAGGGTGGTGAGCGGGGTCAT---GGGAATTTTCTATCCTGAGCCTTCCATGTCAGGACTTCCTGGAACCAGGGGAGGGCCATAGCCTCAGTGACTGGCCATTGGCCAGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 433582 138 - 2125214 CACGGCATCTAGGCTCC-----CTGAGCCTCAT------GGGAAGGGTGGTGAGCGGGGTCAT---GGGAATTTTCTATCCTGAGCCTTCCATGTCAGGGCTTCCTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCACTGGCCAGA i cebCap1.NW_016107703v1 C 0 I 12 s aotNan1.NW_018514293v1 47408 138 + 376347 CATGGCATCTAGGCTCC-----CTGAGCCTCAT------GGGAAGGGTGGTGAGCGGGGTCGT---GGGAATTTTCTATCCTGAGCCTTCCACGTCAGGACTTCCTGGAGACAGGGGAGGGCCACAGCCTCAGTGACTGGCCATTGGCCAGA i aotNan1.NW_018514293v1 C 0 I 12 s otoGar3.GL873611 2167268 142 - 8137123 TGCTGACTCCAAGCCTTCTTGATTGGCCTTGGT------AGGGAAGGCAGTGAACAAGGCCTT---GGGGAATTTCTAGACTGAGCCTCTCACTTCATGATTTCTTGGAGATAGGGAAAGGCTGCA-CCACAGTGACTGGATATTGGCCAGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60983339 136 - 77573801 CACCAAATCTAAGTCTCCTTGACA---------------GGAAGGAGCAACGAGCAGAGTCCTCTTGGAGGATTTCTACAGAAACCCTTCCACTTCATGGTTGCTTGGGGTCAGGG-AAGACTGCATGCACAGTGACTAGCTGTTGGCTAAA i canFam3.chr6 I 400 C 0 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=53121.000000 s hg38.chr7_KI270899v1_alt 70085 24 + 190869 -TACACTCATTAAAGT--GCCCTCTTC s gorGor5.CYUI01015914v1 31243 22 - 432965 -TACACTCATTAAAAT--GCCCT--TC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94664 21 + 85365473 -TACAC-CATTAAAAT--GCCCT--TC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935487 21 + 185818997 --ATACTCATTAAAAT--GCCCT--TC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551426 21 + 192294377 --ATACTCATTAAAAT--GCCCT--TC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312779 21 - 9440265 --ATACTCATTAAAAT--GCCCT--TC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902474 21 - 21915920 --ATACTCATTAAAAT--GCCCT--TC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42104 21 - 21531802 --ATACTCATTAAAAT--GCCCT--TC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66289 21 - 2515279 --ATACTCATTAAAAT--GCCCT--TC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146587871 14 - 204313951 --------GTTGGAGCCAGCCC----- i calJac3.chr2 C 0 C 0 s otoGar3.GL873611 2167410 22 - 8137123 -TATACTCATCAGAAG--GCTCT--TG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60983475 23 - 77573801 AACCACTCATAAGAAG--GCCCT--TC i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 222451 24 + 6586416 I e aotNan1.NW_018514293v1 47546 12 + 376347 I e cebCap1.NW_016107703v1 433720 12 - 2125214 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=5005.000000 s hg38.chr7_KI270899v1_alt 70109 1 + 190869 T s gorGor5.CYUI01015914v1 31265 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94685 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935508 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551447 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312800 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902495 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42125 1 - 21531802 T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66310 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 s otoGar3.GL873611 2167432 1 - 8137123 T i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60983498 1 - 77573801 T i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 222451 24 + 6586416 I e aotNan1.NW_018514293v1 47546 12 + 376347 I e cebCap1.NW_016107703v1 433720 12 - 2125214 I e calJac3.chr2 146587885 0 - 204313951 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=6600.000000 s hg38.chr7_KI270899v1_alt 70110 1 + 190869 C s gorGor5.CYUI01015914v1 31266 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94686 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935509 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551448 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312801 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902496 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42126 1 - 21531802 C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66311 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 C 0 s aotNan1.NW_018514293v1 47558 1 + 376347 C i aotNan1.NW_018514293v1 I 12 C 0 s otoGar3.GL873611 2167433 1 - 8137123 C i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60983499 1 - 77573801 C i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 222451 24 + 6586416 I e cebCap1.NW_016107703v1 433720 12 - 2125214 I e calJac3.chr2 146587885 0 - 204313951 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=25668.000000 s hg38.chr7_KI270899v1_alt 70111 11 + 190869 CAGGGCTGG-----------------GG- s gorGor5.CYUI01015914v1 31267 11 - 432965 CAGGGCTGG-----------------GG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94687 11 + 85365473 CAGGACTGG-----------------GG- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935510 27 + 185818997 CAGAGCTGGGGCCA-GCCCAGGTTGAGG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551449 27 + 192294377 CAGAGCTGGGGCCA-GCCCAGGTTGAGG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312802 27 - 9440265 CAGAGCTGGGGCCA-GCCCAGGTTGAGG- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902497 27 - 21915920 CAGAGCTGGGGCCA-GCCCAGGTTGAGG- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42127 27 - 21531802 CAGAGCTGGGGGCA-GCCCAGGTTGAGG- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66312 27 - 2515279 CAGAGCTGGGGCCA-GCCCAGGTTGAGG- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 222475 13 + 6586416 ---------------GCCCAGGTTGAGG- i colAng1.NW_012117710v1 I 24 C 0 s calJac3.chr2 146587885 9 - 204313951 -------------------AGGCCAAGG- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 433732 11 - 2125214 -----------------CAAGACTGAGG- i cebCap1.NW_016107703v1 I 12 C 0 s aotNan1.NW_018514293v1 47559 10 + 376347 ------------------CAGGCTGAGG- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2167434 28 - 8137123 AAGAGCTGGAGCCACGCCCAGGCTGAGG- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60983500 11 - 77573801 ------------------AAGAGTGGGGG i canFam3.chr6 C 0 I 6 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=4153625.000000 s hg38.chr7_KI270899v1_alt 70122 656 + 190869 ACCTGACTCTCTCAGTCTGTGGGGCCCAGCCCACCTGCTCCTCCCTAATGGCTCCTGCTGGATGGGGAACAGCCTGGCACCAGGTGAACCATCACTGACTCTCCCTGGGGAGAGACGAGGGAGGAGGGGGCATGTC---CAAGA-GGCCAAGGTACAAGCCCAGTGCCCTGCAGGTCTTCCAACATTTCCAGCCGTAATGGCCATGATCACCATGGTCTGGACTTTCTGAAGAAAGTCTTTTCAC-AGGCTCGGCCTGGCTGGAATCTGACCTGTGAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCATCTGCCATGCCTGGAAGAGTTGGACTGGGGAG--GCACAGGGCCTGCCTGGCGTCAGGTGCTGAGGAAGGGATGATAAATGCACCCCC---TCTGTTTTGTCCGTTTCTCACGGCCTCTCTGGCCA---------------------CCCCGTCCGCCTGTGTCTGTCCTGCCCAGCCCTTCTCTGACGAGC--GTGTCTTGGCGCTTTGTCTCTGCTCACCCTGGGCTCATCAGTGTAAACAGCAGGAGG--------------TTCCACCCCAGGCGAGGTGTGCCATTGTGACCGAAGGTCTCAGGGAACAGAACTGAGTCTGGGTAGGTTGAGCTGGGAGTTTCATAGCTGTAGGAAGCTGCGATCGCAGCTTCATGATGCAGACAGAA s gorGor5.CYUI01015914v1 31278 655 - 432965 ACCTGACTCTCTCAGTCTGTGGGGCCCAGCCCACCTGCTCCTCCCTAATGGCTCCTGCTGGATGGGGAACAGCCTGGCACCAGGTGAACCATCACTGACTCTCCCTGGGGAGAGACGAGGGAGGAGGGGGCATGTC---CAAGA-GGCCAAGGTACAAGCCCAGTGCCCTGCAGGTCTTCCAACATTTCCAGCCGTAATGGCCATGATCACCATGGTCTGGACTTTCTGAAGAAAGTCTTTTCAC-AGGCTCGGCCTGGCTGGAACCTGACCTGTGAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCATCTGCCATGCCTGGAAGAGTCGGACTGGGGAG--GCACAGGGCCTGCCTGGCGTCAGGCGCTGAGGAAGGGATGATAAATGCACCCCC---TCTGTTTTGTCCATTTCTCACGGCCTCTCTGGCCA---------------------CCCTGTCCGCCTGTGTCTGTCCTGCCCAGCCCTTCTCTGACGAGC--GTGTCTTGGTGCTTTGTCTCTGCTCACCC-GGGCTCATCGCTGTAAACAGCAGGAGG--------------TTCCACCCCAGGCGAGGTGTGCCGTTGTGACCGAAGGTCTCAGGGAACAGAACTGAGTCTGGGTGGGTTGAGCTGGGAGTTTCATAGCTGTAGGAAGCTGCGATCGCAGCTTCATGATGCAGACAGAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 94698 655 + 85365473 ACCTGACCCTCCCCGTCTGCGGGGCACAGCCCACCTGCTCCTCCCTAATGGCTCCTGCTGGACGGGGAACAGCCTGGCACCAGGTGAATCATCACTGACTCTCCTTGGGGAGACACGAGGGAGGCGGCGGCATGTC---CAAGA-GCCCTAGGTAAGAACCCAGTGCCCTGCAGGTCTTCCAACGTTTCCAGCCATAACGGCCATGATCACCATGGTCTGGACTTTCTGAAGAAAGTCTTTTCAC-AGGCTCGGCCT-GCTGGAATCTGACCTGGGAAGACTTTGGGTCAGTC-GCAGGAATTATCAGGCATCTGCCAGGCCTGGGAGAGTTGGACTCGGGAG--GCACAGGGCCTGCCTGGCGTCAGGTGCTGAGGAAGGGATGATAAATGCACCCCC---TCTGTTTTGTCCCTTTCTCACGGCCTCTCTGGCCA---------------------CGCTGTCCGCCTGTGTCTGTCCCGCCCAGCCCTTCTCTGATGAGC--CTGTCTTGGTGCTTTGTCTCTGCTCACCCTGGGCTCGTCGCTCTAAACAGCAGGAGG--------------TTCCACCCCAGGCGAGGCGTGCCGTTGCGACCGAAGGTCTCAGGGAACAGAACTGAGTCTGAGTGGGTTGAGCTGGGAGTTTCGTAGCTGTAGGAAGCTGAGATCGCAGCTTCATGATGCAGAGAGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33935537 645 + 185818997 ACCTGACCCTCTGAGTCTGCGGG-----GCCCACCTGCTCCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GTCCAAGGTAAGAGCCCACGGCCCTGCAGGTCTTCCAACATTTCCAGCCGTAATGGCCACGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTCGGCTTGGCTGGAATCTGACCTGTGAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGCTGGACTCGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCTGAGGAAGGGATGATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACGGCCTCTCTGGCCA---------------------CCCTGTCCACCTGTGTCTGTCCTACCCAGCCCTTCTCTGATGAGC---CGTCCTGGTGCTTTGTCTCTGCTCA---TGGGCTCGCGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAGCCTCATGGTGTGGAGAGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33551476 645 + 192294377 ACCTGACCCTCTGAGTCTGCGGG-----GCCCACCTGCTCCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCAGGTCTTCCAACATTTCCAGCCGTAATGGCCACGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTCGGCTTGGCTGGAATCTGACCTGTGAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGCTGGACTCGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCTGAGGAAGGGATGATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACGGCCTCTCTGGCCA---------------------CCCTGTCCACCTGTGTCTGTCCTACCCAGCCCTTCTCTGATGAGC---CGTCCTGGTGCTCTGTCTCTGCTCA---TGGGCTCGCGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAGCCTCATGGTGTGGAGAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4312829 645 - 9440265 ACCTGACCCTCTGAGTCTGCAGG-----GCCCACCTGCTCCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCAGGTCTTCCAACATTTCCAGCCGTAATGGCCACGACCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTCGGCTTGGCTGGAATCTGACCTGTGAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCATGCCTGGAAGAGCTGGACTCGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCTGAGGAAGGGATGATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACGGCCTCTCTGGCCA---------------------CCCTGTCCACCTGTGTCTGTCCTACCCAGCCCTTCTCTGATGAGC---CGTCCTGGTGCTTTGTCTCTGCTCA---TGGGCTCACGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAGCCTCATGGTGTGGAGAGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16902524 645 - 21915920 ATCTGACCCTCTGAGTCTGCGGG-----GCCCACCTGCTTCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGATGAGGGAGGAGGGCGCATGTC---TGAGA-GACCAAGGTAAGAGCCCACGGCCCTGCGGGTCTTCCAACATTTCCAGCCATAATGGCCACGATCACCACGATCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTCGGCTTGGCTGGAATCTGACCTGTGAAGCCTTTGGGTCAGTT-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGCTGGACTCGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCTGAGGAAGGGATGATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACAGCCTCTCTGGCCA---------------------CCCTGTCCGCCTGTGTCTGTCCTACCCAGCCCTTCTCTGATGAGC---CGTCCTGGTGCTTTGTCTCTGCTCA---TGGGCTCGCGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCAAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAGCCTCATGGTGTGGAGAGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42154 644 - 21531802 ACCTGACCCTCTGAGTCTGTGGG-----GCCCACCTGCTCCTCCTCAGTGGCTCCTGCTGGACAGGGAACAGTCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCGGGTCTTCCAACATTTCCAGCCGTAATGGCCATGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTCGGCTTGGCTGGAATCTGACCTGGGAAGCCTTTGGGTCAGTC-GCAGGAATTACCAAGCACCTGCCACGCCTGGAAGAGCTGGACTCGGGAG--GCACAGGGCCTGCCTGGTGTCAGGTGCTGAGGAAGGGATG--AAATGCA--CCC---TCTGTTTTGTCGCTTTCTCACGGCCTCTCTGG-CA---------------------CCCTGTCTGCCTGTGTCTGTCCTACCCAGCCCTTCTCTGACGAGC---CGTCCTGGTGCTTTGTCTCTGCTCACCCTGGGCTCACGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGCGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGGTGAGCTGCGAGTTTCGAAGCTGCAGGAAGCTGGGATCGCAGCCTCATGGTGTGGAGAGAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66339 645 - 2515279 ACCTGACCCTCTGAGTCTGCGGG-----GCCCACCTGCTCCTCCTCAATGGCTCCTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGACTCTCCTCAGGGAGAGACGAGGGAGGAGGGCGCATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCGGGTCTTCCAACATTTCCAGCCGTAATGGCCATGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGGCTCGGCTTGGCTGGAATCTGACCTGTGAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGTTGGACTTGGGGG--GCACAGGGCCTGCCTGGTGTCAGGTGCTGAGGAAGGGATGATAAATGCA-CCCC---TCTGTTTTGTCCCTTTCTGACGGCCTCTCTGGCCA---------------------CCCTGTCCGCCTGTGTTTGTCCTACCCAGCCCTTCTCTGATGAGC---CATCCTGGTGCTTTGTCTCTGCTCA---TGGGCTCGCGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGTGAGCTGTGCCATTGTGACCGAAGGTCTCAGGGAGCAGAA-TAAGTCTGTGTGGGTTGAGCTGGGAGTTTCGAAGCTGCAGGAAGCTGGGCTTGCAGCCTCATGGTGTGGAGAGAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 222488 645 + 6586416 ACCTGACCCTCTGAGTCTGCGGG-----GCCCACCTGCTCCTCCTCAATGGCTCTTGCTGGACAGGGAACAGCCTGGCACCAGGTGAACCATCCCTGA--CTCCTCAGGGAGGGACGAGGGAGGAGGGCGTATGTC---TGAGA-GGCCAAGGTAAGAGCCCACGGCCCTGCAGGTCTTCCTGCATTTCCAGCCGTAATGGCCACGATCACCACGGTCTGGACTGTCTGAAGAAGGTCTTTTCAC-AGACTCGGCTTGGCTGGAATATGACCTGTGAAGCCTTTGGGTCAGTC-GCAGGAATTATCAAGCACCTGCCACGCCTGGAAGAGTTGGACTCGGGAG--GCACAGGGCCTGCCTGGTGTCAGGTGCTGAGGAAGGGATGATAAATGCA-CCCC---TCTGTTTTGTCGCTTTCTCACGGCCTCTCTGGCCG---------------------CCCTGGCCGCCTGTGTCTGTCCTACCCAGCCCTTCTCTGACGAGC---CATCCTGGTGCTTTGTCTCTGCTCA-CCTGGGCTCGAGGCTGTAAACAGCAGGAGG--------------TTCCATCCCAGGCGAGCTGTGCCATGGTGACTGAAGGTCTCAGGGAGCAGAA-TAAGTCTGGGTGGGTTGAGCTGGGAGTTTCCAAGCTGCAGGAAGCTGGGATCGCAGCCTCATGGTGCAGAGAGAA i colAng1.NW_012117710v1 C 0 I 18 s calJac3.chr2 146587894 642 - 204313951 ACCTGACCCTCCGAGTCTGCGGGGCCCAGCCCACCTGCTCCTCCCTAATGACTCCTGGTGGACAGCGAACAGCCTGGCACCAGGTGAACCATCACTGACTCTCCTTGGAGAGAGATGAGGGTGGAGGGGGCATGTC---TGAGA-GGCCAAGGAAAGTGCCCGGGGCCCTGCAGGTCTTCCAGCTTTTCCAGCCAT-----CCAAGATCACTACTGTCTGGACTTTCTGAAAAAGGTATTTTGGT-AGGCTTGGCTTGGCTGGAGTGTGACCTGTGAAGTCTTTGGGTCAGTC-GGAGAAATTATCAACCAT---------CTGGAAGAGCCGGACTCAGGAG--GCACAGGGCCTGCCTGGCGTCAGGTGCTGAAGAAGGGATGATAAATGCACCCGC---TCTGTTTTTTCCCTCTCTCACGGCCTCTCT-GCCA---------------------CCCTGTCCACCTGTGTGTGTCCTACCCAGCCCTTCTCTGATGAGCCTGTGTCTTGATGCCTTGTCTCTGCTCACCCTGGGCTCGTGGCTGTAAACCACAGGAGG--------------TTCCATCCCAGGCAAGG-GTGCCTTTGTGACCGAAGGCCTCAGGGAACAGAATTGAGTCTGGGTGGATTGAGCTGGGAGTTTCATAGCTGTAGGAAGCTGGGATTGCAGCCTCATGATGCAGAGAGAA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 433743 640 - 2125214 ACCTGACCGTCCGAGTCTGCGGGGCCCAGCCCACCTGCTCCTCCCTAATGACTCCTGCTGGACAGTGAACAGCCTGGCACCAGGTGAACAATCACTGACTCTCCTTGGAGAGAGAAGAGGGAGGAAGGGACACGTC---TGAAA-GGCCAAGGAAAGCGCCCGAAGCCCT-CAGGTCTTCCAGCATTTCCAGCCAT-----CCATGATCACTACTGTCTGGACTTTCTGAAAAAGGTCTTTTTGC-AGGCTTGGCTTGGCTGGAGTGTGACCTGTGAAGCCTTTGGGTCAGTC-GCAGAAATTATCAAGCAT---------CTGGAAGAGCTGGACTCGGGAG--GCTCAGGGCTTGCCTGGCGTCAGGTGCTGAGGAAAGGATGATAAGTGCACCCGC---TCTG-TTTTTCCCTCTCTCACGGCCTCTCC-GCCA---------------------CCCTGTCCACCTGTGTCTATCCTACCCAGCCCTTCTCTGATGAGCCTGTGTCTTGATGCCTTGTCTCTGCTCACCCTGGGCTAGTGGCTGTAAACCGCAGGAGG--------------TTCCATCCCAGGTGAGG-GTGCCGTTGTGACCGAAGGCCTCAGGGAACAGAATTGAGTCTGGGTGGATTGAGCTTGGAGTTTCATAGCTGTAGGAAGCTGGGATTGCAGCCTCATGATGCGGAGAGAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 47569 631 + 376347 ACCTGACCCTCCGAGTCTGCGGGGCCCAGCCCACCTGCTCCTCCCTAATGACTCCTGCTGGACGGCGAACAGCCTGGCACCAGGAGAACCATCGCTGACTCTCCTTGGAGAGAGACGAGGGAGGAGGGGGCATGGCATGTCTGA-GGCCAAGGAAAGCGCCCAGGGCCCTGCAGGTCTTCCAGCATTTCCAGCCAT-----CCATGATCACTACTGTCTGGACTTTCTGAAAAAGGTCTTTTCGC-AGGCTTGGCTTGGCTGGAGTGTGACCTGTGAAGGCTTTGGGTCAGTC-GCAGAAATTATCAAGCGT---------CTGGAAGAGCTGGACTCGTGAG--GCA--------------CGTCAGGTGCTGAGGAAAGGAGGGTAAACGCACCCGC---TCTGTTTTTCCCCTCTCTCATGGCCTCTCC-GCCA---------------------CCCCGTCCACCCGTGTCTGTCCTGCCCAGCCCTTCTCTGATGAGCCTGTGTCTGGATGTCTTGTTTCTGCTCACCCTGGGCTCGTGGCTGTAAACCGCAGGGGG--------------TTCCATCCCAGGCGAGG-GTGCCATTGTGACCGAAGGCCTCAGGGAACAGAATTAAGTCTGGGTGGATTGAGCTGGGAGTTTCATAGCTGTAGGAAGCTGGGATTGCAGCCTCATGATGCAGAGAGAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2167462 651 - 8137123 A-ATGACCTT--GAGTCAGCAGGGCCCAGCTTACCTGTTCCTCTCTGACTGCTCCCGC-------------------CACCGTGGGGACCATCACTGATTCTTTTCCTGG-GAGATGAGGG----------ATGCC---AGAAATTGCCAAGGTAAGAGTTCAGACCCCTGCGTGGTTTTGAGCATTTCCAGCCTTGCTGGTAACAATCACAAGCATCCAGACCTTCTGAGAAAGGTCCTTTCACAAGGTTAGGCTTGGC-GAGATCTGACCCATGTAGTCTTTGGGTCGGTCAACAGAAATTATTAAGCACCTGCCAGGCCCAGATGAGC-AGACTCAGGAGAAGCACAGGGCACACCGGGC--CAGGTGC------AAGGTCCCTCCAGGGA-CCCTGTGTCTGTCTTG-CCCTTGTTCATGTCCTCTCCAGCCATTCTATCCACTTGAGTTTGTGTCCTGTCTGCCCATGTCTGTCC--CCAAATCCTGCTCTGATGAGCCTTTGTCTTGGTGCTCTGTCTCTGTGTGTCCTCAGCTTGTGGGTGTGGGTTGCAGTAGGTGGACACTGGAGGTTTCCATCCTAGG--AGATACACTGCTCT-CCCATGGGTCTCAGGGAGCAGAACTGAGCCTGGGAGGGCTGAGCTAGGAGTTTAGTAGCTGGAGGAAGCTGGACTCTCAGCCTCATGATGCAGAGCCTA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60983511 6 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=85755.000000 s hg38.chr7_KI270899v1_alt 70778 20 + 190869 GGCCTTGTCTCAGCTCAGTG- s gorGor5.CYUI01015914v1 31933 20 - 432965 GGCCTTGTCTCAGCTCAGTG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 95353 19 + 85365473 GGCCTTGTCTCAGCTCAGT-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936182 18 + 185818997 -GCCTTCTCTCAGCTCCGT-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33552121 18 + 192294377 -GCCTTCTCTCAGCTCCGT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4313474 18 - 9440265 -GCCTTCTCTCAGCTCCGT-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16903169 18 - 21915920 -GCCTTCTCTCAGCTCCGT-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42798 18 - 21531802 -GCCTTCTCTCAGCTCCGT-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 66984 18 - 2515279 -GCCTTCTCTCAGCTCCGT-- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146588536 18 - 204313951 -GGCCTGTCTCAGCTCAGT-- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 434383 18 - 2125214 -GGCCTGTCTCAGCTCAGT-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48200 18 + 376347 -GGCCTGTCTCAGCTCAGT-- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168113 20 - 8137123 AGCCTTACCTCAGTTCAAT-T i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 223133 18 + 6586416 I e canFam3.chr6 60983511 6 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=2787472.000000 s hg38.chr7_KI270899v1_alt 70798 454 + 190869 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATTGTACCGCTGCCTCTC---------------CCAGTAGCA-GCTCCCAGGAGGCAGTACAGTCACGGGGCCCCGCTGGTAGAAGCCTGAAAAGTCCATCGGGAAAACCTCAAAGGC---------CA-CCAGT--CCTCGAGGTAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGGAGG--GGCAAACGGCACCAGGGGTGGGAGAGGTCAAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCACGAGACGACAGCTCACACCAGCTGCCCAGAGGCACAGCCCCTCTGCCAGGCTTCAGCAGGGCACGGCTTGATCTCAAGGCCCTCTCTTCTCGTCCCAC-CGCCCCTCCCTCCTGTGACAGGAGGACCAGCAGTTCCACTCTGAGCCCGGCTGAGGCCCGACCTCCTCCACCTCAGCCCTGAGAATCTTCTCCAGCTGGGATGG s gorGor5.CYUI01015914v1 31953 453 - 432965 GGGGAAGCCCCTTGTCGACTCTAGACAGC-GGGGATTGTACCGCTGCCTCTC---------------CCAGCAGCA-GCTCCCAGGAGGCAGTGCAGTCACGGGGCCCCGCTGGTAGAAGC-TGAATAGTCCATCGGGAAAACCTCAAAGGC---------CA-CCAGT--CCTCGAGGTAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGAAGG--GGCAAACCGCACCAGGGGTGGGGGAGGTCAAGGCAGAGCGTCTGCCCCATCCTAGACCAGCTGCACGAGACGACAGCTCACACCAGCTGCCCAGAGGCACAGCCCCTCTGCCAGGCTTCAGCAGGGCACGGCTTGATCTCAAGGCCCTCTCTTCCCGTCCCAC-CGCCCCTCCCTCCTGTGACAGGAGGACCAGCAGTTCCACTCTGAGCCTGGCTGAGGCCCGACCTCCTCCACCTCAGCCCTGAGAATCTTCTCCAGCTGGGATGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 95372 455 + 85365473 GGGGAGGCCCCTTGCTGACTCTAGGCAGG-GGGGACTGTACCGCTGCCTCTC---------------CCAGCAGCAGGCTCCCAGGAGGCAGTGCAGTCACGGGGCCCCGCTGGCAGAAGCCTGAAAAGTCCATCGGGAAAACCTCAAAGGC---------CA-CCAGT--CCTCCAGGTAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGGAGG--GGCAAACGACACCAGGGGTGGGAGAGGTCAAGGCAGAGCCTCTGCCCCATTCTAGACCAGCTGCACGAGACGACAGCTCACACCAGCTGCTCAGAGGCACAGCCCCTCTGCCAGGCTTCAGCAGGCCACAGCTTGACCTCAAGGCCCTCTCTTCCCATCCCAC-CGCCCCTCCCTTCTGTGACAGGAGGACCAGCAGGTCCACTCTGAGCCCAGCTGAGGCCCGACCTCCTCCACCTCAGCCCTGAGAATCTTCTCCAGCTGGGATGG i nomLeu3.chr20 C 0 I 240 s rheMac8.chr3 33936200 455 + 185818997 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCGTTCCACTGCCTCTC---------------CCAGCAGCAGGCTCCCAGGAGGCAGTGCCGTCACGGGGCCCCGCTGGCAGAAGCCTGAAAAGTCCATCAGGGAAACCTCCAAGGTAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCAAACGGCACCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAACTGCATGAGACAACAGCTCACATCAGCTGCCCAGAGGCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCTGCTTGCTCTCAAGACCCTCTCTTCCCATCTCAG--GGCCCTCCCTTCTGTGACAGGAGGACTAGCAGGTGTGCTCTGAGCCTGGCTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAATCTTCTCCAGC-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33552139 455 + 192294377 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCGTTCCACTGCCTCTC---------------CCAGCAGCAGGCTCCCAGGAGGCAGTGCCGTCATGGGGCCCCGCTGGCAGAAGCCTGAAAAGTCCATCAGGGAAACCTCCAAGGTAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCAAACGGCACCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACATCAGCTGCCCAGAGGCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCTGCTTGCTCTCAAGACCCTCTCTTCCCATCTCAG--GGCCCTCCCTTCTGTGACAGGAGGACTAGCAGGTGTGCTCTGAGCCTGGCTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAATCTTCTCCAGC-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4313492 455 - 9440265 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCGTTCCACTGCCTCTC---------------CCAGCAGCAGGCTCCCAGGAGGCAGTGCCGTCACGGGGCCCCGCTGGCAGAAGCCTGAAAAGTCCATCAGGGAAACCTCCAAGGTAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCAAACGGCATCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACATCAGCTGCCCAGAGGCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCTGCTTGCTCTCAAGACCCTCTCTTCCCATCTCAG--GGCCCTCCCTTCTGTGACAGGAGGACTAGCAGGTGTGCTCTGAGCCTGGCTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAATCTTCTCCAGC-------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16903187 455 - 21915920 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCGTTCCACTGCCTCTC---------------CCAGCAGCAGGCTCCCAGGAGGCAGCGCCGTCACGGGGCCCCGCTGGCAGAAGCCTGAAAAGTCCATCAGGGAAACCTCCAAGATAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCGAATGGCACCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACATCAGCTGCCCAGAGGCATGGCCCCCCTGCCAGGCTTTAGTAGGTCTCTGCTTGCTCTCAAGACCCTCTCTTCCCATCTCAG--GGCCCTCCCTTCTGTGACAGGAGGACTAGCAGGTGTGCTCTGAGCCTGGCTGAGGCCCGACCTCCTCCACCTTAACCCTGAGAATCTTCTCCAGC-------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 42816 455 - 21531802 GGGGAAGCCCCTTGTTGACTCTAGGCAGG-GGGGATCGTTCCGCTGCCTCTC---------------CCAGCAGCAGGCTCCCAGGAAGCAGTGCCATCACGGGGCCCCGCTGGCAGAAGCCTGAAAAGTCCATCAGGGAAACCTCCAAGGTAGTGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGGCGG--CGCGAACGGCACCCAGTGTAGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACACCAGCTGCCCAGAGGCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCCGCTTGCTCTCAAGACCCTCTCTTCCCATCTCAG--GGCCCTCCCTTCTGTGACAGGAGGACCAGCAGGTGTGCTCTGAGCCCGGCTGAGGCCCAACCTCCTCCACCTCAAACCTGAGAATCTTCTCCAGC-------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67002 455 - 2515279 GGGGAAGCCCCTTGTCGACTCTAGGCAGG-GGGGATCATTCCACTGCCTCTC---------------CCAGCAGCAGGCTCCCAGGAGGCAGTGCCGTCACGGGGCCCCGCTGGCAGAAGCCTGAAAAGTCCATCAGGGAAACCTCCAAGGTAGTGTCTAACA-CCCGT--CCTCGAGGCAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCGAATGGCACCCAGTGTGGGAGAGGTCGAGGCAGAGCCTCTGCCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACGCCAGCTGCCCAGAGGCATGGCCCCCCTGCCAGGCTTTAGCAGGTCTCCGCTTGCTCTCAAGACCCTCTCTTCCCATCTCAG--GGCCCTCCCTTCTGTGACAGGAGGACCAGCAGGTGTGCTCTGAGCCCGGCTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAATCTTCTCCAGC-------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 223151 428 + 6586416 GGGGAAGCCCCTTGTTGACTCTAGGCAGG-GGGGAGGGTACCGCCGCCTCTC---------------CCAGCAGCAGGCTCCCAGGAGGCAGTGCCGTCACGGGGCCCCGCTGGCAGAAGCCTGAAAAGTCCATCAGGGAAACCTCCAAGGTAATGTCTAACA-CCAGT--CCTCGAGGCAGCTGCTGCTCCAGCT-GTGCTCACCTGGAGTGGAGG--CGCCAACGGCACCTGGTGTGGGAGAGGTCGAGGCCGAGCCTCTGCCCCATCCTAGACCGGCTGCACGAGACAACAGCTCACATCAGCTGCCCAGAGGCACGGCTCCCC-ACCAGCCTTCAGCAGGCCT-----------------CCTCTCTTCCCATCCCAG-CACCCCTCCCCTCTGTGACAGGAGGACCAGCAGGTGCGCT----------CTGAGGCCCGACCTCCTCCACCTCAACCCTGAGAACCTTCTCCAGC-------- i colAng1.NW_012117710v1 I 18 C 0 s calJac3.chr2 146588554 453 - 204313951 GGGGAAGCCCCTCGTTGACTCTGGGCAGGCAGGGATTGTACCACTGCCTTTC---------------CCAGCAGCATGCTCCCAGGAAGCAGTGCAGTCACGGGGCCTTGCTAGGAAAAGCCTGAAAAGTTCATCAGGGAGATCTCAAAGGCAGTGTCTAATG-CCAGT--CCTCAAGGCAGCTGCTGCTCCAGCT-GGGC-CACTGGG---TGAGA--AGTGAGTGGCATCAGGTATGGGAGTGGTCGAGTCCGAGCCTCTGGCCCATCCTAGACCA---GCATGAGACAACAGCTTACACCAGCTGCCCAGAGGCACAGCTCCTCTGTCAGGCTTCAGCAGGCCATGGCTTGACCTCAAAGCCCTCTCCTCCCCAGCCTG------CTCCCTTCTGTGACAGAAGGACCAGCAGGTCTGCTCCCAGCCTGGCTGAGGCCTGACCTCCCCCACCTCTACCCTGAGAATCTTCACCAGCTGGGATGG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 434401 465 - 2125214 AGGGAAGCCCCTCGTTGACCCTGGGCAGGCAGGGATTGTACCACTGCCTTTC---------------CCAGCAGCAGGCTCCCAGGAAGCAGTGCAGTCATGGTGCCCTGCTGGGAGAAGCCTGAAAAATCCATCAGGGAGACCTCAAAGGCAGTGTCTAATG-CCAGT--CCTCAAGGCAGCTGCTTCTCCAGCT-AGGC-CACCAGGAGAGGAGG--AGCGAGTGGCATCAGGTGTGGGAGTGGTCGAGGCCAAGCCTCTGGCCCATCCTAGACCAGCTGCATGAGACAACAGCTCACACCAGCTGCCCAGAGGCACAGCTCCTCTGCCAGGCTTCAGCAGGCCATGGCTTGATCTCAAAGCCCTCTCCTCCCCAGCCCGCTGCCCCTCCCTTCTGTGACAGGAGGACCAGCAGGTCTGCTCCCAGCCCGGCTGAGGCCCGACCTCCCCCATCTCCACCCTGACAATCTTCACCAGCTGGGATGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48218 465 + 376347 GGGGAAGCCCCTCGTTGACTCTGGGCAGGCAGGGACTGTAGCACTGTCTTTC---------------CCAGCAGCAGGCTCCCAGGAAGCAGTGCAGCCACGGGGCCCCGCTGGGAGAAGCCTGAAAAGTCCATCAGGGAGACCTCAAAGGCAGCGTCCAATG-CCAGC--CCTCAAGGCAGCTGCTGCTCCAGCT-GGGC-CACCGGGAGAGGTGA--AGCGAGTGGCATCAGGTGTGAGAGTGGTCGAGGCCGAGCCTCTGGCCCATCCTAGACCAGCTGCACGAGACAACAGCTAACACCAGCTGCCCAGAGGCACAGCTCCTCTGCCAGGCTTCGGCAGGCCACGGCTTGATCTCAAAGCCCTCTCCTCCCCAGCCCGCTGCCCCTCCCTTCCGTGACAGGAGGACCAGCAGGTCTGCTCCCAGCCCGGCTGAGGCCCGACGTCCCCCACCTCCACCCTGAGAATCGTCACCAGCTGGCAGGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168133 404 - 8137123 GAGGAAGCTCCTGGGTGATTCTGGGGCTG-GAGGAATCTACAGGGACTTTTCCTGAGCAGCCCCTGGCCAGCTGCAGCCTCCCAGAATACAGTGCAGTCCTGTGGCCCTACT------------CAGAACCCATCAGGAATACCTCAAAGGCAGAATCTCACAGCTAGTTCCCTAGAGGCACCTGCTTTTCCAGCTGGGGCTCATCAAGAAAGGAGGAAAGGGAAAGGCACCAGTCGTGGGAGAGGCTGAGACAG-GTTTCTG------------CCAACTG----------------------------CAGAGGTGCAACCCCTCTGCCGGGCTTTAGTGGGGCGAGGTTTAATCTCAAAGCCCTGTCCTGACAGTCTGG--TCTCTCCTCATCTGTGAGAGG-TGACCAGCAGGTCTACTCTGAG--------------------------CTCAGCCCTGAGGATTTTCTTCAGCAAGGCTGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60983511 6 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=274085.000000 s hg38.chr7_KI270899v1_alt 71252 121 + 190869 ctgttgccctgttgtcctgttgccctgttgccctgttgttctgttgtcctcttgtcctgttgtcctgttgtcTTGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGTTCCCGCGCCAGCC s gorGor5.CYUI01015914v1 32406 121 - 432965 ctgttgtcctgttgtcctgttgccctgttgttctgttgtcctcttgtcctgttgtcctgttgtcctgttgtcTTGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGTTCCCGCGCCAGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 96067 121 + 85365473 ctgttgtcctgttgtcctgttgccctattgtcctgttgtcctgttgtcctgttgtcctgttgtcctgttgtcctgCCCTCCCAGCTCCTGACCTCACAGGGGCTTTGCTCCCATGCCAGCC i nomLeu3.chr20 I 240 C 0 s rheMac8.chr3 33936655 48 + 185818997 -------------------------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACATCAGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33552594 48 + 192294377 -------------------------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACACCAGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4313947 48 - 9440265 -------------------------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACACCAGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16903642 48 - 21915920 -------------------------------------------------------------------------TGCCCTCCCAGCTCCTGACCATACAGGGGCTTTGCTCCCACACCAGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 43271 48 - 21531802 -------------------------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACACCAGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67457 48 - 2515279 -------------------------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACAGGGGCTTTGCTCCCACACCAGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 223579 48 + 6586416 -------------------------------------------------------------------------TGCCCTCCCAGCTCCTGACCACACACGGGCTTTGCTCCCACACCAGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589007 57 - 204313951 ----------------------------------------------------------------CTGTTGCTCTGTCCTCCCAGCTCCTGACCACACTGGGTCTTTGCTCCCATGCCAATC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 434866 57 - 2125214 ----------------------------------------------------------------CTGTTGCTCTGGCCTCCCAGCTCCTGACCACACTGGGGCTTTGCTCCCACACCAGTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48683 57 + 376347 ----------------------------------------------------------------CTGTTGCTATGTCCTCCCAGCTCCTGACCACACTGGGGCTTTCCCCCCATGCCAGTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168537 43 - 8137123 ---------------------------------------------------------------------ATGCTGCCCT--------CTGATCACATA-GAGCTTTGCTCCCAGGCCAGTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60983511 6 - 77573801 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=760812.000000 s hg38.chr7_KI270899v1_alt 71373 160 + 190869 TCTTTGGGGAAAGTGGGGGAGGGGGGCCCTGCTCCAGGCTCTGG-GACATT-------------------------------------------TGGCTTGGGCTGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGGTTCCCACCAG-ATGTGGGCATGGTCAGCTACATCA-GGcccccaaaggtgtgcaca-tcctaat s gorGor5.CYUI01015914v1 32527 160 - 432965 TCTTTGGGGAAAGTGGGGGAGGGGGGCCCTGCTCCAGGCTCTGG-GACATT-------------------------------------------TGGCTTGGGCTGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGGTTCCCACCAG-ATGTGGGCATGGTCAGCTACATCA-GGcccccaaaggtgtgcaca-tcctaat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 96188 160 + 85365473 TCTTTGGGGAAAGTTGGGGAGGGGGGCCCTGCTCCAGGCTCTGG-GACCTT-------------------------------------------TGGCTTGGGCTGTAACCTGCATCCAAGGAGAAGAAACACTGAAGGTGGGCTCCCACCAG-ATGTGGGCACggtcagcaacatca-ggcccccaaaggtgtgcaca-tcctagt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936703 123 + 185818997 TCTTTGGGGAAAGTGCAGGGAGGGG--CCTGCTTCAGGCTCTGG-GACATG-------------------------------------------TGGCTTGGGCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGGTTCCCACC-------------------------------------AGGTGTGCACA-CCCTAAT i rheMac8.chr3 C 0 I 11 s macFas5.chr3 33552642 123 + 192294377 TCTTTGGGGAAAGTGCAGGGAGGGG--CCTGCTTCAGGCTCTGG-GACATG-------------------------------------------TGGCTTGGGCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGGTTCCCACC-------------------------------------aggtgtgcaca-ccctaat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4313995 123 - 9440265 TCTTTGGGGAAAGTGCAGGGAGGGG--CCTGCTTCAGGCTCTGG-GACATG-------------------------------------------TGGCTTGGGCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGGTTCCCACC-------------------------------------AGGTGTGCACA-CCCTAAT i macNem1.NW_012019910v1 C 0 I 11 s cerAty1.NW_012002954v1 16903690 123 - 21915920 TCTTTGGGGAAAGTGCAGGGAGGGG--CCTGCTTCAGGCTCTGG-GACATG-------------------------------------------TGGCTTGGGCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGGTTCCCACC-------------------------------------AGGTGTGCACA-CCCTAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 43319 123 - 21531802 TCTTTGGGGAAAGTGCGGAGAGGGG--CCTGCTCCAGGCTCTGG-GACATG-------------------------------------------TGGCTTGGGCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGGTTCCCACC-------------------------------------aggtgtgcaca-ccctaat i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67505 123 - 2515279 TCTTTGGGGAAAGTGCAGGGAGGGG--CCTGCTTCAGGCTCTGG-GACATG-------------------------------------------TGGCTTGGGCCGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGGTGGGTTCCCACC-------------------------------------AGGTGTGCACA-CCCTAAT i manLeu1.NW_012101810v1 C 0 I 11 s colAng1.NW_012117710v1 223627 165 + 6586416 TCTTTGGGGAAAGTGTGGGGAGGGG--CCTGCTCCAGGCTCTGG-GACATGTGGGGAAAGTGGGGGAGGGGCCTGCTCCAGGCTCTGGGACATTTGGCTTCGGCTGTAGCCTGTGTCCAAGG-GAAGAAACCCTGAAGGTGGGTTCCCACC-------------------------------------AGGTGTGCACA-CCCTAAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589064 159 - 204313951 TCTTTGGGAAAAGTGGGAAGAGAAT-CCCTGCTCCAGGCTGTGG-GACATT-------------------------------------------TGGCTTGGGTGGTAGCCTGTGTCCAAGGAGAAGAAGCCCTGAAGATGGGTTCCCACCAG-ACATGGGCATGGTCAGCTACATCA-GGTccccaaaggtatgcact-tcctaat i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 434923 159 - 2125214 TCTTTGGGAAAAGTAGGAAGAGGGA-CCCTGCTCCAGGCTGTGG-GACATT-------------------------------------------TGGCTTGGGCTGTAGCCTGTGTCCAAGGAGAAGAAACCCTGAAGATGGATTCCCACCAG-ACATGGGCATGGTCAGCTACATCA-GGcccccaaaggtgtgcacg-gcctaat i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48740 157 + 376347 TCTTTGGGAAAAGTGGGAAGAGGGA--CCTGCTCCAGGGTGTGG-GACTTT-------------------------------------------TGGCTTGGGCTGTGGCCTGTGTCCAAGGAG-AGAAACCCTGAAGATGGGCTCCCACCAG-ACGTGGGCATGGTCAGCTCCGTCA-GGcccccaaaggtgtgcacg-tcctaat i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168580 114 - 8137123 TCTTTAGGGGAAGAGGGAAGGCAGGGCTCTGATCCAGGATCT------ATA------------------------------------------------------------------------------------AATGTGAGATCCCATCAG-ATGTGGGTATGGTCACCCTaacaa-gggtccccaaagggtataga-tcctaat i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60983517 163 - 77573801 TCTTTTAGGAACATGGGGGAAAGGG-CCCTACTCCAGGCCCCGGTGACATT-------------------------------------------TGGCTTGGGCTCTAGCCTATGTCCAAGGAAGAAGCACACATAGGGTGGGTTCACATCAGAACATGGGtgcagtaggctgaatcagggcccccaatgttgcccatatccctaat i canFam3.chr6 I 6 C 0 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=24037.000000 s hg38.chr7_KI270899v1_alt 71533 13 + 190869 cccacgaacccgt- s gorGor5.CYUI01015914v1 32687 13 - 432965 cccacgaacccgt- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 96348 13 + 85365473 cccacgaacccgc- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33552765 11 + 192294377 -ccatgcccctg-- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16903813 11 - 21915920 -CCACGCCCCTG-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 43442 11 - 21531802 -ccacgcccccg-- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 223792 11 + 6586416 -CCACGCCCCCG-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589223 12 - 204313951 cccaagaacctg-- i calJac3.chr2 C 0 I 1 s cebCap1.NW_016107703v1 435082 12 - 2125214 cccaagaacctg-- i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 48897 12 + 376347 cccaggaacctg-- i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 2168694 12 - 8137123 cccaagaaccca-- i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 60983680 13 - 77573801 ggcaagaacctg-t i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 67628 11 - 2515279 I e macNem1.NW_012019910v1 4314118 11 - 9440265 I e rheMac8.chr3 33936826 11 + 185818997 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=412972.000000 s hg38.chr7_KI270899v1_alt 71546 70 + 190869 gggcacgttaccttacatgcaagaggggctctatggatggagtcgggataagtgtctaga-gattgggagg- s gorGor5.CYUI01015914v1 32700 69 - 432965 gggcacgttaccttacatgcaagaggg-ctctatggatggagtcgggataagtgtctaga-gattgggagg- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 96361 70 + 85365473 gggtatgttaccttacatgcaagaggggctctgtggatggagtcgggataagtgtctaga-gattgggagg- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936837 70 + 185818997 GGGTACGTTGCCTTCCAAGCAAGAGGCGCTCTGTGGACGGAGTCGGGACAGATGTCTAGA-GATTAGGAGG- i rheMac8.chr3 I 11 I 10 s macFas5.chr3 33552776 70 + 192294377 gggtacgttgccttccaagcaagaggcgctctgtggacggagtcgggacaaatgtctaga-gattaggagg- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314129 70 - 9440265 GGGTACGTTGCCTTCCAAGCAAGAGGCGCTGTGTGGACGGAGTCGGGACAAATGTCTAGA-GATTAGGAGG- i macNem1.NW_012019910v1 I 11 I 10 s cerAty1.NW_012002954v1 16903824 70 - 21915920 GGGTACGTTGCCTTCCAAGCAAGAGGCGCTCTGTGGACGGAGTCGGGACAAATGTCTAGA-GATTAGGAGG- i cerAty1.NW_012002954v1 C 0 I 10 s chlSab2.chr28 43453 69 - 21531802 gggtacgttgccttccaagcaagaggcgctctgtggacggagtcgggacaagtgtctaga-gattaggag-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67639 70 - 2515279 GGGTACGTTGCCTTCCAAGCAAGAGGCGCTCTGTGGACAGAGTCGGGACAAATGTCTAGA-GATTAGGAGG- i manLeu1.NW_012101810v1 I 11 I 10 s colAng1.NW_012117710v1 223803 70 + 6586416 GGGTACATTGCCTTCCAAGCAAGAGGCGCTCTGTGGACAGAGTCGGGACAAGTGTCTAGA-GATTAGGAGG- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589236 70 - 204313951 gggtatgtcaccttacacgcaagaggcgttctgtggatgtagttaggataagtgtcaaga-ggtagggagg- i calJac3.chr2 I 1 C 0 s cebCap1.NW_016107703v1 435095 70 - 2125214 gggtatggtaccttacatgcaagaggcattctgtggatgtagttaggataagtgtcgaga-ggcagggagg- i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 48910 61 + 376347 aggtgtattaccttacacgcaggaggcactct---------gttaggataagtgtcgaga-ggcagggagg- i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2168707 69 - 8137123 -aagctattaccttacatgcaagaggtattttgtagaggtggttaagataagtatcttga-aatggagaga- i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 60983693 62 - 77573801 --------gaccttata-gcaagaggca-tccgtagatgtgatgaagataagcatctgaactacttgggggt i canFam3.chr6 C 0 C 0 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=-7544.000000 s hg38.chr7_KI270899v1_alt 71616 31 + 190869 ttgttctgggtcatccagatgacttatgaga s gorGor5.CYUI01015914v1 32769 31 - 432965 ttgttctgggtcatccagatgacttacgaga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 96431 14 + 85365473 ttgtgct------tccggtt----------- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33552846 10 + 192294377 -tgctcgggct-------------------- i macFas5.chr3 C 0 C 0 s chlSab2.chr28 43522 11 - 21531802 ttgctcggggt-------------------- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 223873 5 + 6586416 -TGCTC------------------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589306 20 - 204313951 ttgttcctgatgatctgggt----------- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 435165 20 - 2125214 ttgttcctgatgatctgggt----------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48971 20 + 376347 ttgtacctgatcatctgggt----------- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168776 20 - 8137123 ttattctgggttgtctgggt----------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60983755 10 - 77573801 gtgtgtgtgg--------------------- i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 67709 10 - 2515279 I e cerAty1.NW_012002954v1 16903894 10 - 21915920 I e macNem1.NW_012019910v1 4314199 10 - 9440265 I e rheMac8.chr3 33936907 10 + 185818997 I e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1890143.000000 s hg38.chr7_KI270899v1_alt 71647 300 + 190869 gggcccttatgagag-ggagacagcaagctca---cagagagggccatggaacaacagcagctcagacacagcaga-ggccgcacagctgtc----------------------------------------------------------------------------------------------------ctgggt--------------------------------gccgagtag----ctgcagaggtcggag-------------------gaggtgcagagcaggtgtt---ctgc-----------------------------------------------agcctccagagggaccagccctgctgactccctggctttggctcagtgaaactcatttcggacttctgagctccagctctgcaagagaagaaatctgtgctattttaaaccactaaatttgtggtttctgt-----ttcagcag----------cagtgggagaGGGCGAAATGC s gorGor5.CYUI01015914v1 32800 299 - 432965 gggcccttatgagac-ggaggcagcaagctca---cagagagggccacggaacaacagcagctcagacacagcaga-ggccacacagctgtc----------------------------------------------------------------------------------------------------ctgggt--------------------------------gccgagtag----ctgcagaggtcggag-------------------gaggtgcagagcaggtgtt---ctgc-----------------------------------------------agcctccagagggaccagccccgctgactcactggctttggctcagtgaaactcatttcggacttctgacctccagctctgcaagagaagaaatctgtgctattttaaaccactaaatttgtggtttctgt-----t-cagcag----------cagtgggagaGGGCGAAATGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 96445 295 + 85365473 gggcccttatgagag-ggaggcagcaagctca---CCAAGC--ACCATGG---AACAGCAGCTCAGACACGGCAGA-GGCCGCGCAGCTGTC----------------------------------------------------------------------------------------------------CTGTGT--------------------------------GCCGAGCAG----CTGcagaggtcggag-------------------ggggtgcagagcaggtgtt---ctgc-----------------------------------------------agcctccagagggaccaaccctgctgactccctggctttggctcagtgaaactcatttcggacttctcaccttcagcactacaagagaagaaatctgtgctattttaaaccactacatttgtggtttctgt-----ttcagcag----------cagtgggagaGGGCAAACTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33936917 298 + 185818997 GGGCCCGTATGAGAG-GGAGGCAGCAAGCTCA-----GAGAGGGCCATGGGACAACAGCAGCTCAGAC--AGCAGA-GGCCGTGTAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcag----ctgcagaggccggcg-------------------gaggcacggagcaggtgttctcctgc-----------------------------------------------agcctccagtgggaccagccctgccgacaccctggctttggcccagtgaaactcatttcggacttctgacctccagcaccacaagagaagaaatctgtgctggtttgaaccactaaattagtggtatctgt-----ttcagcag----------cagtgggagaGGGC-AAATGC i rheMac8.chr3 I 10 C 0 s macFas5.chr3 33552856 298 + 192294377 gggcccgtatgagag-ggaggcagcaagctca-----gagagggccatgggacaacagcagctcagac--agcaga-ggccgtgtagctgtc----------------------------------------------------------------------------------------------------ctgggt--------------------------------gccgagcag----ctgcagaggccggcg-------------------gaggcacggagcaggtgttctcctgc-----------------------------------------------agcctccagtgggaccagccctgccgacaccctggctttggcccagtgaaactcatttcggacttctgacctccagcaccacaagagaagaaatctgtgctggtttgaaccactaaattagtggtatctgt-----ttcagcag----------cagtgggagaGGGC-AAATGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314209 298 - 9440265 GGGCCCGTATGAGAG-GGAGGCAGCAAGCTCA-----GAGAGGGCCATGGGACAACAGCAGCTCAGAC--AGCAGA-GGCCGTGTAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcag----ctgcagaggccggcg-------------------gaggcacggagcaggtgttctcctgc-----------------------------------------------agcctccagtgggaccagccctgctgacaccctggctttggcccagtgaaactcatttcggacttctgacctccagcaccacaagagaagaaatctgtgctggtttgaaccactaaattagtgttatctgt-----ttcagcag----------cagtgggagaGGGC-AAATGC i macNem1.NW_012019910v1 I 10 C 0 s cerAty1.NW_012002954v1 16903904 298 - 21915920 GGGCCCGTATGAGAG-GGAGGCAGCAAGCTCA-----GAGAGGGCCATGGGACAACAGCAGCTCAGAC--AGCAGA-GGCCGTGTAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcag----ctgcagaggccggcg-------------------gaggcacggagcaggtgttctcctgc-----------------------------------------------agccttcagtgggaccagccctgccaacaccctggctttggcccagtgaaactcatttcggacttctgacctccagcaccacaagagaagaaatctgtgctggtttaaaccactaaattagtggtatctgt-----ttcagcag----------cagtgggagaGGGC-AAATGC i cerAty1.NW_012002954v1 I 10 C 0 s chlSab2.chr28 43533 299 - 21531802 gggcccgtatgagag-ggaggcagcaagttca-----gaga-ggccacgggacaacagcagctcagacaaagcaga-ggaagtgcagctgtc----------------------------------------------------------------------------------------------------ctgggt--------------------------------gccgagcag----ctgcagaggccggca-------------------gaggcacagagcaggtgttttcctgc-----------------------------------------------agcctccagagggaccagccctgccggcaccctggctttggcccagtgaaactcatttcggacttctgacctccagcatcacaagagaagaaatctgtgccagtttaaaccactaaatttgtggcatctgt-----ttcagcag----------cagtgggagaGGGC-AAATGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 67719 298 - 2515279 GGGCCCGTATGAGAG-GGAGGCAGCAAGCTCA-----GAGAGGGCCATGGGACAACAGCAGCTCAGAC--AGCAGA-GGCCGTGTAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcag----ctgcagaggccggtg-------------------gaggcacggagcaggtgttctcctgc-----------------------------------------------agtctccagtgggaccagccctgccgacatcctggctttggcccagtgaaacttatttcggacttctgacctccagcaccacaagagaagaaatctgtgctggtttaaaccactaaattagtggtatctgt-----ttcagcag----------cagtgggagaGGGC-AAATGC i manLeu1.NW_012101810v1 I 10 C 0 s colAng1.NW_012117710v1 223878 299 + 6586416 GGGCCCGTATGAGAG-GGAGGCAGCAAGTTCA-----GAGA-GGCCATGGGACAACAGCAGCTCAGACAGAGCAGA-GGCCGTGCAGCTGTC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCTgagcag----ctgcagaggccggcg-------------------gaggcatggagcaggtgttctcctgc-----------------------------------------------agcctccagagggaccagccctgctgacgccctggctttggcccagtgaaactcattttggacttctgacctccagcaccacaagagaagaaatctgcgctggtttaaaccactgaatttgtggtaactgt-----ttcagcag----------cagtgggagaGGGC-AAATGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589326 303 - 204313951 gggtccaTATGAGAG-AGAGGCAACAAGCTCA---CAGGGAGGGCAATGGGGCAACAGCAGCTCAGACAGAGCAGA-GGCCGCACAGCTGGC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCCAAGCAG----CTGTAGAGGCCAGAG-------------------GCGGTGCAGAGCATGTGTtttcctag-----------------------------------------------agcctccagaggcatcagccctgctgactacctggatttggcccagtgaaactcattttgggcttctgacctccagcactgcaagagaagaaatctgtgctattttaaaccactaggcttgtggtatctgt-----ttcagcag----------tagtgggagaGGGCAAAATGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 435185 303 - 2125214 gggTTTGTATGAGAA-GGGGGCAGCAAGCTCA---CAGGGAGGGCAATGGGACAACAGCAGCTCAGACAGAGCAGA-GGCAGCACAGCTGGC----------------------------------------------------------------------------------------------------CTAGGT--------------------------------CCCAAGCAG----ctgtagaggccagag-------------------gcagcgcagagcaggtgtcctcctac-----------------------------------------------agcctccagaggcaccagccctgctgactccctggatttggcccagtgaaactcattttgggcttctgacctccagcactgcaagagaagaaatctgtgcacttttaaaccactaggcttgtggtatctgt-----ttcagcag----------cagtggaagaGGGCAAAATTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 48991 300 + 376347 gggtccgtgtgagag-ggaggcggcaagctca---cagggagggcgatgggg---cagcagCTCAGACAGGGCAGA-GGCCGCACAGCTGGC----------------------------------------------------------------------------------------------------CTGGGT--------------------------------GCcgagcag----ctgtagaggccggag-------------------atggcgcagagcaggtgttctcctgt-----------------------------------------------ggccttcagaggcgccagtcctgctgactccctggatttggcccagtgaaactcattttgggcttctgacctccagcactgcaagagaagaagtctgtgctattttaaaccactaagcttgtggtatctgt-----ttcagcag----------cagtgggagaGGGCGAAATGC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2168796 493 - 8137123 gggtcctt---agagtggaggctgcaagctca---aagagaaggtgataagacaatag-agcagagac--agaaga-tgccacacagctggcttcagaggggagggaggTACAGGGAAGCTTCTAGAACAGGCATCCTCAAACTACGGCCTGCGGGCCACATGCGGCCTACTGAGGACATTTATCCGGCCTGCTGGGTGTTTTTGCCACCGCTGCCTGTCCTGCTTAGCAGCCGACTGG----CCCCAGGGCCCGCagtctggccctctgacggtctgagggacagtg-aactggcctcctgtttaaaaagtttgaggacccctgTGAAGCTGAAGGAAGCACAGGGCagagctctctggggaacaagctctgcaggtcccgtgaacttagcccggtaaaactcatctcggactcctggccgccagcactgtaagaggataaatctgtgttgttcggagcttctgagctgg-gtgatttgc-----tccagtag----------ccatgggaG-GGGCGGAATGT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60983765 316 - 77573801 gggtcttcataag-g-ggagccatgaagataaaaacagagaaggtgatgtgacaccataagcagagac--agaagatggctttgaatatgga----------------------------------------------------------------------------------------------------gtaagg--------------------------------ggcaaccagaagcctctagatgctggaa-------------------gtg--ccaggacaatc--tctcctgg-----------------------------------------------aatgtccagagggaccagtcctgttggtcccttgatttcagccctgtgaaactggcct-agactttggatctctgaaacctcaagataataattctgtgctgttttaagccactgactttgtggtTCCTGTGACCCTGTAGCAGAGAATGGACACAGAGGCAGGGAG--AGATGC i canFam3.chr6 C 0 C 0 e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=163155.000000 s hg38.chr7_KI270899v1_alt 71947 30 + 190869 TCTCCAGCTTGGC-ACCCGCAGCCCAGCTCA--- s gorGor5.CYUI01015914v1 33099 30 - 432965 TCTCCAGCTTGGC-ACCCACAGCCCAGCTCA--- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33937215 30 + 185818997 TCTCCAGCTTGGC-ACCTGCAGCCCAGCTCG--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33553154 30 + 192294377 TCTCCAGCTTGGC-ACCTGCAGCCCAGCTCG--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4314507 30 - 9440265 TCTCCAGCTTGGC-ACCTGCAGCCCAGCTCG--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16904202 30 - 21915920 TCTCCAGCTTGGC-ACCCGCAGCCCAGTTCA--- i cerAty1.NW_012002954v1 C 0 I 2791 s chlSab2.chr28 43832 30 - 21531802 TCTCCAGCTTGGC-ACCCGCAGCCCAGCTCA--- i chlSab2.chr28 C 0 I 2577 s manLeu1.NW_012101810v1 68017 30 - 2515279 TCTCCAGCTTGGC-ACCCGCAGCCCAGTTCA--- i manLeu1.NW_012101810v1 C 0 I 2539 s colAng1.NW_012117710v1 224177 30 + 6586416 TCTCCAGCTTGGC-ACCTGCAGCCCAGCTCA--- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146589629 30 - 204313951 TCTCCAGCTTGGC-CCCCACAGCCCAGCTTG--- i calJac3.chr2 C 0 I 2351 s cebCap1.NW_016107703v1 435488 30 - 2125214 TCTCCAGCTTGGC-ACCCACAACCCAGCTCG--- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 49291 30 + 376347 TCTCCAGCTCGGC-ACCCACAGCCCAGCTCG--- i aotNan1.NW_018514293v1 C 0 I 2322 s otoGar3.GL873611 2169289 15 - 8137123 ----------------TCTCAGTCCAGCTTG--- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60984081 33 - 77573801 -TCTGGGCTTGACTACCCCTCATCCAACCCTCAG i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=33176.000000 s hg38.chr7_KI270899v1_alt 71977 4 + 190869 AAGG s gorGor5.CYUI01015914v1 33129 4 - 432965 AAGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33937245 4 + 185818997 AAGG i rheMac8.chr3 C 0 I 2177 s macFas5.chr3 33553184 4 + 192294377 AAGG i macFas5.chr3 C 0 I 2566 s macNem1.NW_012019910v1 4314537 4 - 9440265 AAGG i macNem1.NW_012019910v1 C 0 I 2224 s cerAty1.NW_012002954v1 16907023 4 - 21915920 aagg i cerAty1.NW_012002954v1 I 2791 C 0 s chlSab2.chr28 46439 4 - 21531802 AAGG i chlSab2.chr28 I 2577 C 0 s manLeu1.NW_012101810v1 70586 4 - 2515279 aagg i manLeu1.NW_012101810v1 I 2539 C 0 s colAng1.NW_012117710v1 224207 4 + 6586416 AAGG i colAng1.NW_012117710v1 C 0 I 3119 s calJac3.chr2 146592010 4 - 204313951 AAGG i calJac3.chr2 I 2351 C 0 s cebCap1.NW_016107703v1 435518 4 - 2125214 AAGG i cebCap1.NW_016107703v1 C 0 I 2338 s aotNan1.NW_018514293v1 51643 4 + 376347 AAGG i aotNan1.NW_018514293v1 I 2322 C 0 s otoGar3.GL873611 2169304 4 - 8137123 AAGG i otoGar3.GL873611 C 0 I 3924 s canFam3.chr6 60984114 4 - 77573801 GAGG i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=12975.000000 s hg38.chr7_KI270899v1_alt 71981 6 + 190869 CAGGGA s gorGor5.CYUI01015914v1 33133 6 - 432965 CAGGGA i gorGor5.CYUI01015914v1 C 0 C 0 s cerAty1.NW_012002954v1 16907027 6 - 21915920 cagggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46443 6 - 21531802 CAGGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70590 6 - 2515279 cagggg i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146592014 6 - 204313951 CAGGAG i calJac3.chr2 C 0 C 0 s aotNan1.NW_018514293v1 51647 6 + 376347 CAGGGG i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 60984118 6 - 77573801 CAGGAA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 224211 3119 + 6586416 I e otoGar3.GL873611 2169308 3924 - 8137123 I e macNem1.NW_012019910v1 4314541 2224 - 9440265 I e macFas5.chr3 33553188 2566 + 192294377 I e rheMac8.chr3 33937249 2177 + 185818997 I e cebCap1.NW_016107703v1 435522 2338 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=32424.000000 s hg38.chr7_KI270899v1_alt 71987 12 + 190869 -CTGTGGTTGCTT s gorGor5.CYUI01015914v1 33139 12 - 432965 -CTGTGGTTGCTT i gorGor5.CYUI01015914v1 C 0 C 0 s cerAty1.NW_012002954v1 16907033 12 - 21915920 -ctgtggttgctt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46449 12 - 21531802 -CTGTGGTTGCTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70596 12 - 2515279 -ctgtggttgctt i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146592020 12 - 204313951 -CTGTGGTTGCTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 437860 12 - 2125214 -ctgtggttgctt i cebCap1.NW_016107703v1 I 2338 C 0 s aotNan1.NW_018514293v1 51653 12 + 376347 -CTGTGGTTGCTT i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 60984124 13 - 77573801 CTAATGACTAATT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 224211 3119 + 6586416 I e otoGar3.GL873611 2169308 3924 - 8137123 I e macNem1.NW_012019910v1 4314541 2224 - 9440265 I e macFas5.chr3 33553188 2566 + 192294377 I e rheMac8.chr3 33937249 2177 + 185818997 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=52232.000000 s hg38.chr7_KI270899v1_alt 71999 21 + 190869 Tgcaaatgagggaggctgggt s gorGor5.CYUI01015914v1 33151 21 - 432965 Tgcaaatgagggaggctgggt i gorGor5.CYUI01015914v1 C 0 C 0 s cerAty1.NW_012002954v1 16907045 21 - 21915920 cacagatgagggaggctgggt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46461 21 - 21531802 CGCAGATGAGGGAGGCTGGGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70608 21 - 2515279 cacagatcagggaggctaggt i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146592032 21 - 204313951 TGCAGACATGAGAGGCTGGGT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 437872 21 - 2125214 tgcagatgtgagaggctgggt i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 51665 21 + 376347 TGCGGACGTGAGAGGCTGggt i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173232 21 - 8137123 TACAAGTGAGGGAGGCTGGGT i otoGar3.GL873611 I 3924 C 0 s canFam3.chr6 60984137 21 - 77573801 TGTCCCTGGAGGTCAGTGGGT i canFam3.chr6 C 0 I 2550 e colAng1.NW_012117710v1 224211 3119 + 6586416 I e macNem1.NW_012019910v1 4314541 2224 - 9440265 I e macFas5.chr3 33553188 2566 + 192294377 I e rheMac8.chr3 33937249 2177 + 185818997 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=136615.000000 s hg38.chr7_KI270899v1_alt 72020 60 + 190869 ccctgccctcaccgggcttaccatctaggtttggagaggagtgacgt-AAGGTGAAGTCAG s gorGor5.CYUI01015914v1 33172 60 - 432965 ccctgccctcaccgggcttaccatctaggtatggagaggagtaacgt-aaggtgaagtcag i gorGor5.CYUI01015914v1 C 0 C 0 s cerAty1.NW_012002954v1 16907066 60 - 21915920 ccctgccctcaccaggcttaccatctaggtacggagcagagtaatgt-aaggcgaagtcag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46482 60 - 21531802 CCCTGCCCTCACTGGGCTTACCATCTAGGTACGGAGTGGAGTAACAT-AAGGTGAAGTCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70629 60 - 2515279 ccctgccctcaccaggcttaccgtctaggtacggagcagagtaatgt-aaggcgaagtcag i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146592053 61 - 204313951 CCCTGTTTTCACCAGGCTTACCATCCAGACATGGAGAGGAGCAACGTAAAGGTGAAGTCAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 437893 61 - 2125214 ccctgccctcactgggcttaccatccagacatggagaggagaaacataaaggtgaagtcag i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 51686 61 + 376347 ccctgccctcactgggcttaccagccagacatggagaggagcaacgcaaagctgaaatcag i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173253 60 - 8137123 CCCTCCCCTCAGGGGCCTTAAAATCAGGGACTGGGGAAGAGTAATAA-AAAGCAGAGTCAG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 224211 3119 + 6586416 I e canFam3.chr6 60984158 2550 - 77573801 I e macNem1.NW_012019910v1 4314541 2224 - 9440265 I e macFas5.chr3 33553188 2566 + 192294377 I e rheMac8.chr3 33937249 2177 + 185818997 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=498335.000000 s hg38.chr7_KI270899v1_alt 72080 213 + 190869 AAAAGAATCATAAGAAAAGAGAGTCCACACCCTGGAAGGATCTGAGGCAGAAGGAAGCTCTTGCTGAACCACCTGAGAGGAGGCGGTCTGGCCTGAGCACCCTGGGGGGCCTGCGCCCCCACTTCGAGGCCCCTCTGGAAGGTGCTTGGCTCTCCGGATGACCCCAGCACTGGGGAGACCCGCTGTGCTTTCCAGGCAGCACAGACACCTCGG s gorGor5.CYUI01015914v1 33232 212 - 432965 aaaagaatcagaagaAAAGA-AGTCCACACCCTGGAAGGATCTGAGGCAGAAGGAAGCTCTTGCTGAACCACCTGAGAGGAGGCGGTCTGGCCTGGGCACCCTGGGGGGCCTGCGCCCCCACTTCAAGGCCCCCCTGGAAGGTGCTTGGCTCTCCGGATGACCCCAGCACTGGGGAGACCCGCTGTGCTTTCCAGGCAGCACAGACACCTCGG i gorGor5.CYUI01015914v1 C 0 C 0 s cerAty1.NW_012002954v1 16907126 203 - 21915920 aaaagaatcataagaGAAGAAAGTCCACACCCCAGAAGGATCTGAGGCAGAAGGAAGCTCTTGCCAAACCACCTGAGAGGA--------GGCCTGGGCACCCTGGGGGG-CGGTGCCCCCACTTCAAGGTCCCCC-AGAAGGTGCTTGGCTCTCCAGATGACCCCAGCGCTGGGGAGACCCGCTGTGCTTTCCCGGCAACATGGACACCCCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46542 203 - 21531802 AAAAGAATCATAAGAAAAGAAAGTCCACACCCCGGAAGGATCTGAGGCAGAAGGAAGGTCTTACCAAACTACCTGAGAGGA--------GGCCTGGGCACCCTGGGGGG-CGGTGCCCCCACTTCAAGGCCCCCC-AGAAGGTGCTTGGCTCTCCAGATGACCCCAGCGCTGGGGAGACCCGCTGTGCTTTCCCGGCAGCACGCACCCCTCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70689 203 - 2515279 aaaagaatcataagaaaagaaagtccaCACCCCAGAAGGATCTGAGGCAGAAGGAAGCTCTTGCCAAACCACCTGAGAGGA--------GGCCTGGGCACCCTGGGGGG-CGGTGCCCCCACTTCAAGGTCTCCC-GGAAGGTGCTTGGCTCTCCAGATGACCCCAGCGCTGGGGAGACCCGCTGTGCTTTCCCGGCAGCATGGACACCCCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 227330 203 + 6586416 aaaaaaatcataagaaaagacagtccataCCCCGGAAGGATCTGAAGCAAAAGGAAGCTCTTGCCAAACCACCTGAGAGGA--------GGCCTGGGCACCCTGGGGGG-CAGTGCCCCCACTTCAAGGTCCCCC-GGAAGGTGCTTGGCTCTCCAGATGACCCCCGCGCTAGGGAGACCCGCTGTGCCTTCCCGGCAGCACGGACACCTCAG i colAng1.NW_012117710v1 I 3119 C 0 s calJac3.chr2 146592114 211 - 204313951 AAAAGAATCAAAAGTGAAGAAAGTGCACACCCTGGGAGCACCTGAGGCAGAAGGGGGCTCTTCCTGAGCCACCAGAGAAGAGGCAGTCTGGCCTGGGCACCCTAGGGGGCTGGCACCCCCACATCAAGGCTCCCCTGGAAGGCTCTTGGCTCTCCAAATGA-CCCAGCACTGGGGAGA-CCACTGTGCTTTCCAGGCAGCAAAGACACCTCAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 437954 212 - 2125214 aaaagaatcataagcaaagaaagtacacaCCCTGGGAGCATCCAAGGCAGAAGGGGGCTCTTCCTGAACCACCGGAGAAGAGGCAGTCTGGCCTGGGCAACCTGGGGGGCTGGCACCTCCTCATCAAGGCTCCCCTGGAAGACTCTTGGCTCTCCAGATGACCCCAGCACTGGGGAGA-CCACTGTGCTTTCCAGGCAGCAAAGACACCTCAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 51747 184 + 376347 aaaagaaccataAGCAAAGAAAGCGCACACCCCGGGAGCCTCCAAGGCGGGAGGGGGCTCTCCCTGAACCACCGGAGAAGAGGCAGTCTGGCCTGGGCGCCC--GGGGGCCGGCGCCCCCACATCAAGGCTCCCCTGGAAGGCTCTTGGCTCTCCGGATGACCCCAGCACTGGGG---------------------------AGACACCTCAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173313 106 - 8137123 CAAAGAAACATAAGAAAAGAGAGTGCCCATGCTGGGAGCACCTGCGGCAGAAAGGA-CTCTGCCTGAACCATAC-AACGGA--------GGCTGGGGAAGCCTGGGGTG------------CTTCTAG------------------------------------------------------------------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60984158 2550 - 77573801 I e macNem1.NW_012019910v1 4314541 2224 - 9440265 I e macFas5.chr3 33553188 2566 + 192294377 I e rheMac8.chr3 33937249 2177 + 185818997 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=2186229.000000 s hg38.chr7_KI270899v1_alt 72293 433 + 190869 TGTAGGTGTTGTGGTGCCACAGGGAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGACGGGCTGCTGGCTGGAACAAACCCCACCTCT--------------ATCTGAGCCACCAACCATCTGAACCGGTATTCTCTCTATCTGACAAATATTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATGCACAATGCCTCAGGACGCCTTGAGGAAGGAGCAGCGTGTTGCTGCTGAGGGTGAACACACGTGGTCTCTGAGGAGAGGCGACAGATCTCCCTGGGCGTCAGTCATCCTGGG-------ACTGGGTGTCGTGGAAGAAGGTGACACCAGGCAGAAACCAAGAGCAGGGGAGCTGCAGGCCGGTATCAGAGCCCG------------TATCAGAGCAG---AGTGGCCCCTGAGC-GGGGAGGCAGCTGGAGCT--CACTGTTGGAGGAGGGCCCGGCACCTGCACCTG s gorGor5.CYUI01015914v1 33444 433 - 432965 TGTAGGTGTTGTGGTGCCACAGGGAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGACGGGCTGCTGGCTGGAACAAACCCCACCTCT--------------ATCTGAGCCACCAACCATCTGAACCGGTATTCTCTCTATCTGACAAATATTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATGCACAGTGCCTCAGGACGCCTTGAGGAAGGAGCAGCGTGTTGCTGCCGAGGGTGAACACACGTGGTCTCTGCGGAGAGGCGACAGATCTCCCTGGGCGTCAGTCATCCTGGG-------ACTGGGTGTCGTGGAAGAAGGTGACACCAGGCAGAAACCAAGAGCAGGGGAGCTGCAGGCCGGCATCAGAGCCCA------------TATCAGAGCAG---AGTGGCCCCTGAGC-GGGGAGGGAGCCGGAGCT--GACTGTTGGAGGAGGGCCCGGCACCTGCACCTG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33939426 441 + 185818997 TGTGGGTGTTTTGGTGCCACGGGGAAGGGTGTTTCTTTCAGCCTAGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCTGTCAACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTC---CTTTACATCCCAGAAATG-------ATGAAAATACACAGTTCCTCAGGACACCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCGTCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCGGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCCGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG-------ACCTGCATGTG i rheMac8.chr3 I 2177 C 0 s macFas5.chr3 33555754 441 + 192294377 TGTGGGTGTTTTGGTGCCACGGGGAAGGGTGTTTCTTTCAGCCTAGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCTGTCAACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTC---CTTTACATCCCAGAAATG-------ATGAAAATACACAGTTCCTCAGGACACCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCGTCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCAGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCCGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG-------ACCTGCATGTG i macFas5.chr3 I 2566 C 0 s macNem1.NW_012019910v1 4316765 444 - 9440265 TGTGGGTGTTTTGGTGCCACGGGGAAGGGTGTTTCTTTCAGCCTAGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCTGTCAACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATACACAGTTCCTCAGGACGCCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCGTCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCGGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCTGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG-------ACCTGCATGTG i macNem1.NW_012019910v1 I 2224 C 0 s cerAty1.NW_012002954v1 16907329 444 - 21915920 TGTGGGTGTTTTGGTGCCACGGGGAAGGGTGTTTCTTCCAGCCTGGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCCGTCAACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATACACAGTTCCTCAGGACGCCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCATCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCGGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCCGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG-------ACCTGCATGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 46745 442 - 21531802 TGTGGGTGTTGTGGTGCCACAGGGAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGATGGGCTGCTGGCTGGAACCAACCTCATCTCT--------------ACCTGAGCCGTCAACCACCGGAACCGGCATTCTCTCTGTCTGACAGGTCTTCCTTTTTCTTTACATCCCAGAAATG-------GTGAAAATACACAGTTCCTCAGGACGCCCTGACAGAGAAGCAGCGTGCTGCTGCTGAGGGTGAACTCACATGGCCTC--AGAGGAGGCGGTGGATCTCCCTGGGCATCCGTCACCCTGGGACTGGGAACTGGGTGTCATGGAAGAAGGTGACACCGGGCAGACAGCAACAGTGGGGGAGCTGCAGGCCGGTATCAGGGCCTGTATCAGAGCCCGTGTCAGAGCAG---AGTGGCCTCCGAGC--GGGAGGGAGCTGGAGCT--CACTGCTGGAGGAGG-------ACCTGCATGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 70892 444 - 2515279 TGTGGGTGTTTTAGTGCCACGGGGAAGGGTGTTTCTTCCAGCCTGGCTCTCAGGACGGGCTGCTGGCTGGAACCAACCCCATCTCT--------------ATCTGAGCCATCAACCGCCTGAACAGGCATTCTCTATGTCTGACAAGTCTTCCTCCTTCTTTACATCCCAGAAATG-------GTGAAAATACACAGTTCCTCAGGATGCCCTGAGGGAGGAGCAGCGTGCTGCTGCCGAGGGTGAACACACGTGGTCTCTGAGGGGAGGTGGTGGATCTCCCTGGGCATCCGTCATCCTGGGACTGGGGACTGGGTGTCGTGGAAGAAGGTGACACTGGGCAGACACCAAGAGCAGGGGAGCTGCAGGCCGGTATCAGAGCCTGTATCAGAACCCATGTCAGAGCAG---AGTGGCCCCCGAGC--GGGAGGGAGCCGGAGCT--CACTGCTGGAGGAGG-------ACCTGCATGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 227533 430 + 6586416 TGTGGGTGCTGTGGTGCCACGGGGAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGACGGGCTGCTGGCTGGAGCCAACCCCATCTCT--------------ATCTGAGCTGTCAGCCGCCTGAACCGGCATTCTCTCTATCTGACAAGTCTTCCTCCTTCTTTACATCCCAGAAACGGTGAAAAGTGAAAATGCACAGTTCCTCAGGACGCCCTGATGGAGGA-------GCCGCTGCCG-GGGTGAACGCATGTGGTCTCTGAGGGGAGGTGAAGGATCTCCCTGGGCATCCGTCATCCTGGG-------ACTGGGTGTCGTGGGAGAAGCTGACACCGGGCAGACACCAAGAGC-GGGGAGCTGCAGGCCGGTATCAGAGCCTG------------TGTCAGAGCAG---AGCGGCCCCCGAGC--GGGAGGGAGCCAGAGCT--CACTGCTGGAGGAGGGCCCGGCACCTGCATATG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146592325 443 - 204313951 TCA-GGTGCTGTGGT--CACAGGAAAGGGTGTTTCTTCCAGCCTGGTTCTCAGGATGGGGTGCTCATTGGAACCAAACCTACCTCGCTCAATTTTGTTCAATTTGAGCCATCAACCACCTGAACTGGTATTCTCTCTATCTAAAAAATATTCCTTTTCCTTTACATCCCAGAAGTG-------GTGAAACTGCACAATTCCTCAGGACACCTTGAGGGAGAAGCAGCATGTTTCTGCC-ACAGTGAACACACGTGGTCTATGAGGAGCGGCCATGGATCCCCCTGGGTGTCAGTCATCCTGGG-------ACCGGACGTCATGGAAGAAGGTGACACCAGGCAGACACCAAGAGCAGGGGAGCTGCCGTCCAGTATCAGAGCCTG------------TATCAGAGCAG---AGCAGCCCCTGAGA-GGGGAAGGAGCTGGAGCT--CACTGCTGGAGGAGCGCCCAGCACCTCCTCATG i calJac3.chr2 C 0 I 7 s cebCap1.NW_016107703v1 438166 445 - 2125214 TGAGGGTGCTGTGGTGCCACAGGAAAGGGTGTTTCTTCCAGCCTGGCTCTCAGGACGGGGTGCTGGTTGGAACCAACCCCACCTCGCTCAATTTCGTTCAATTTGAGCCATCAGCCACCTGAACTGGTGTTCTCACTATCTGAAAAATATTTCTTTTGCTTTATATCCCAGAAATG-------GTGAAACTGCACAATTCCTCAGGACACCTTGAGGGAGGAGCAGCGTGTTGCTGCC-ACGGTGAACACACATGGTCTATGAGGAGTGGCCATGGATCCCCTTGAGTGTCGGTCATCCTGGG-------ACTGGATGTCATGGAAGAAGGTGACACCAGGCAGACCCCAAGAGCAGGGGAGCTGCCATCCAGTATCAGAGCCTG------------TATCAGAGCAG---AGCAGCCCCTGAGC--AGGAGGGAGCTGGAGCT--CACTGCTGGAGGAGGGCCCAGCACTTCCTCATG i cebCap1.NW_016107703v1 C 0 I 7 s aotNan1.NW_018514293v1 51931 444 + 376347 CGACGGTGCCGTGGTGCCACGGGAAAGGGTGTTTCTTCCGGCCTGGTTCTCAGGACGGGGTGCTGGTTGGAACCAACACCACCTCGCTCAATTTTGCTCAATTTGAGCCATCAGCCACCTGAACTGGTATTCTCTCTATCTGAAAAATATTCCTTTTTCTTTATATCCCAGAAATG-------GTGACACTGCACGATTCCTCAGGACACCTTCAGGGAGGAGCAGCGTGTTGCTGTC-ATGGTGAGCACACGTGGTCTCTGAAGAGCGGCCATGGATCCCCTTGGGTGTCGGTCATCCTGGG-------ACTGGATGTCATGGAAGAAGGTGACACCAGGCAGACACCAAGAGCA-GGGAGCTGCCGTCCGGTGTCAGAGCCTG------------TATCAGAGCAG---AGCGGCCCCTGAGC--AGGACGGAGCCGGAGAT--CAGTGCTGGAGGAGGGCCCAGCACCTCCTCATG i aotNan1.NW_018514293v1 C 0 I 19 s otoGar3.GL873611 2173419 364 - 8137123 --TGGACGT----------CAGTGAGGGGGTTTCCTTCCAGCCTGCTTCCTGGGACAGAGTGCTGGCTGGAACCAGTTCCACCTCT--------------GTCTGAGCCGTTAACCACCTGAGCTGGTGTTC----TGTCTGAAAAGTACTCTTCCTTCCTTCTATCACAGTAGTG-------GTGAGAACGCATAGTTTCTCAGGATGCCTTCAGGAAGGAGAAG----------------------------------------GAGGTAGGAGCTTCCTTTAGG-----------CCAGG-------ACTGGATGGCATTG----AGGTGACAGCAGG-GGATGCTGAGAGCAGGGGAGCCACACTGAGGTGCTGGACACAA---------CCTTATCCGAGTGGCCAGGTGGCCCTCGATTCAGGGTGGGTGTCGGGGCCCACACTGTGGGAGGAGGATCCAGTGCCTG------ i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60984158 2550 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=39116.000000 s hg38.chr7_KI270899v1_alt 72726 11 + 190869 AGGACATGAGT s gorGor5.CYUI01015914v1 33877 11 - 432965 AGGACATGAGT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33939867 11 + 185818997 AGGACGTGAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33556195 11 + 192294377 AGGACGTGAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4317209 11 - 9440265 AGGACGTGAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16907773 11 - 21915920 AGGACGTGAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 47187 11 - 21531802 AGGACATGAGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 71336 11 - 2515279 AGGACATGAGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 227963 11 + 6586416 AGGACGTGAGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146592775 11 - 204313951 AGGCCATGTTT i calJac3.chr2 I 7 I 1 s cebCap1.NW_016107703v1 438618 11 - 2125214 AAGCAATGTTT i cebCap1.NW_016107703v1 I 7 I 1 e otoGar3.GL873611 2173783 0 - 8137123 C e canFam3.chr6 60984158 2550 - 77573801 I e aotNan1.NW_018514293v1 52375 19 + 376347 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=561808.000000 s hg38.chr7_KI270899v1_alt 72737 126 + 190869 CTGAGGCCTGCGGAGAAGCCAG-GTGAGACACCGCTGTGCTTCTCTGGGCCACGGCCCCTCACGGCTGCATCCAGTCACCAGAGTTCCTCTGTGCCTCACCCACCCTTGATCATAGAAGACAGCCTG s gorGor5.CYUI01015914v1 33888 126 - 432965 CTGAGGCCTGCGGAGAAGCCAG-GTGAGACACCGCTGTGCTTCTCTGGGCCACGGCCCCTCACGGCTGCATCCAGTCACCAGAGTTCCTCTGTGCCTCACCCACCCTTGATCATAGAAGACAGCCTG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33939878 124 + 185818997 CTGAGGCCTGCAGAGAAGCCAG-GTGAGACACTGCTGTGCTTCTCTGGGCCACGGCCCCTCATGGCTGCATCCCATCACCAGAGCTC--CTGTGCCTCACCCACCCATGATCATAGAAGACAGTCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33556206 124 + 192294377 CTGAGGCCTGCAGAGAAGCCAG-GTGAGACACTGCTGTGCTTCTCTGGGCCACGGCCCCTCATGGCTGCATCCCATCACCAGAGCTC--CTGTGCCTCACCCACCCATGATCATAGAAGACAGTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4317220 124 - 9440265 CTGAGGCCTGCAGAGAAGCCAG-GTGAGACACTGCTGTGCTTCTCTGGGCCATGGCCCCTCATGGCTGCATCCCATCACCAGAGCTC--CTGTGCCTCACCTACCCATGATCATAGAAGACAGTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16907784 124 - 21915920 CTGAGGCCTGCAGAGAAGCCAG-GTGAGACACTGCTGTGCTTCTCTGGGCCACGGCCCCTCATGGCTGCATCCCGTCACCAGAGCTC--CTGTGCCTCACCCACCCATGATCATAGAAGACAGTCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 47198 124 - 21531802 CTGAGGCCTGCAGAAAAGCCAG-GTGAGACACTGCTGTGCTTCTCTGGGCCACGGCCCCTCATGGCTGCATCCCGTCACCGGAGCTC--CTGTGCCTCACCCACCCTTGATCATAGAAGACAGTCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 71347 124 - 2515279 CTGAGGCCTGCAGAGAAGCCAG-GTGAGACACTGCTGTGCTTCTCTGGGCCACGGCCCCTCATGGCTGCATCCCGTCACCAGAGCTC--CTGTGCCTCACCCACCCATGATTATAGAAGACAGTCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 227974 95 + 6586416 CTG-------------AGCCGG-GTGAGACACTGCTGTGGTTCTCTGGGCCA----------------CATCCGGTCACTTGAGCTC--CTGTGCCTCACCCACCTGTGATCACAGAAGACAGTCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146592787 127 - 204313951 CTGAGGCCTGCAGAAAAGCCAGCGTGAGACACCACTGTGTGTCTCTGGGCCATGGCCCCTCACTGCTGCATCTTGTCACCAGAGCTCCTCTGTACCTCACACACCCTCTATCACAGAAGATAGTCTG i calJac3.chr2 I 1 C 0 s cebCap1.NW_016107703v1 438630 127 - 2125214 CTGAGGCCTGCAGCAAAGCCAGCATGAGACACTGCTGTGCATCCTTGGGCCACAGCCCCTCACTGCTGCATCCTGTCACCAGAGCTCCTCTGTGCCTCACCCACCCTCTATCACAGAAGACAGTCTG i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 52394 127 + 376347 CTGAGGCCTGCGGAAAAGCCAGCATGAGCCACTGCTGTGCGTCCCTGGGCCACGGCCCCTCACTGCTGCATCCTGTCACCAGAGCTCCTCTGTGCCTCACCCACCCTCTATCACAGAAGACAGTCTG i aotNan1.NW_018514293v1 I 19 C 0 s otoGar3.GL873611 2173783 4 - 8137123 ------------------------------------------------------------------------------------------TGGG--------------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60984158 2550 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=6165035.000000 s hg38.chr7_KI270899v1_alt 72863 1139 + 190869 CATGTCCTCAGC-TCTGTCCTCCAACCGGCTGCCCG-----------------GGAGGCCTCCCTGGCTGCTCCCCAAACTGCACGTGCCCTGAGTCAGCCCTGGGG----CCTCATGGA--CTCCCCTGTTCACGCATCCCGGCAGCGCGCAAACCATCCCTGTCGGCTCCCAGTGAAATGCTACAGGATCTCAGGGCAGCTGCAC-CCCGCAGGTTCAGAAGGGA----TGGGATTCTGTGTCCTTTTCCTTCTTGCTTCAGACCTTCACCTGGGGCT---CTAAC----ACCGAAAGTCTGTGCCAGACAGAGGCATCCACAG--CGACA-------------GGAGCCTGGGCCAGGGCGGCCAT-CCCTGCTGCAGAGACAAAT-GTCAGTGTCCATGGAATCAGTTCGGTGCGGTGAGCGGCAGGTCTGATATGAAAGCTACTCGCACTTCCCGTCTGGGCAAGAGCAGGAACTCGGCAGGCAGAGAGCTGGT-GGAGCTTTCCATGGGAAAACCAGAACCTTCAAAGAGCCCGGCCTCCCTCTGATCAGCCCCTTCTTTCTGATCAGATGCATTATTGACGAGGCAGCCTCCTCCACCTGCCTCTCATCAGAGCAGCTCGTTTCCCACCGTGGTAATTTATACTTGTGATTTTGGCCTTGATCAATAAAGGCAACGGAGAAGACGCACCCGTTCATTTCCTACAGGAGGGGCGGAAACACA----CAGGCCTCTGTGCAGAGCTT-T-CCTGGGCTCTTCTGAAGGCAAGCAAACCCATCAAAGGGAAGATCTGCACGCTGAA--AGGTCAGCAGTTCCCTTTTCCCCATGGGATTTGTGTTAGCAACTTTGCGAGTGGAAGATGCATTTGGAACTGCCAGTCCCTTACAGCCCTCACATGGGAGGTGCAATGTTCATCCTGTCACTATTTTAAAACTCGTCTCAGGGTTGGGAGTA----ACTGAAACCGTTTTGGGCTTAATTTTGCATGAGGACGTAGCAGAGCATGACAGAAGGGAAAAAG-AGAAAATGCTGGCAAAGGAGAAATGGCCCTAAGAGGGAAGCCGGATCCCTAGCTGGGTCGGAGTAG-------------------ATGAGCGGGGAATGAGGGG-----CTGGAGGAT-------GCAGCTCCG---AGCGTGCAGGGGT-GGTGTGCTCTCGGGAG-GGAGCTGCTGT-----GGAGCTACTAAGGAGGGAGGCTGAGGGGTG s gorGor5.CYUI01015914v1 34014 1139 - 432965 CATGTCCTCAGC-TCTGTCCTCCAACCGGCTGCCCG-----------------GGAGGCCTCCCTGGCTGCTCCCCAAACTGCACGTGCCCTGAGTCAGCCCTGGGG----CCTCATGGA--CTCCCCTGTTCATGCATCCCGGCAGCGCGCAAACCATCCCTGTCGGCTCCCAGTGAAATGCTACAGGATCTCAGGGCAGCTGCAC-CCCACGGGTTCAGAAGGGA----TGGGATTCTGTGTCCTTTTCCTTCTTGCTTCAGACCTTCACCTGGGGCT---CTAAC----ACCGAAAGTCTGTGCCAGACAGAGGCATCCACAG--CGACA-------------GGAGCCTGGGTCAGGGCGGCCAT-CCCTGCTGCAGAGACAAAT-GTCAGTGTCCATGGAATCAGTTCGGTGCGGTGAGCGGCAGGTCTGATATGAAAGCTACTCGCACTTCCCGTCTGGGCAAGAGCAGGAACTCGGCAGGCAGAGAGCTGGT-GGAGCTTTCCATGGGAAAACCAGAACCTTCAAAGAGCCCGGCCTCCCTCTGATCAGCCCCTTCTTTCTGATCAGATGCATTATTGACGAGGCAGCCTCCTCCACCTGCCTCTCATCAGAGCAGCTCGTTTCCCACCATGGTAATTTATACTTGTGATTTTGGCCTTGATCAATAAAGGCAACGGAGAAGACGCACCCGTTCATTTCCTACAGGAGGGGCGGAAACACA----CAGGCCTCTGTGCAGAGCTT-C-CCTGGGCTCTTCTGAAGGCAAGCAAACCCATCAAAGGGAAGATCTGCACACTGAA--AGGTCAGCAGTTCCCTTTTCCCCGTGGGATCTGTGTTAGCAAGTTTGCGAGTGGAAAATGCATTTGGAACTGCCAGTCCCTTACAGCCCTCACATGGGAAGTGCGATGTTAATCCTGTCACTATTTTAAAACTTGTCTCAGGGTTGGGAGTA----ACTGAAATCGTTTTGGGCTTAATTTTGCATGAGGACGTAGCAGAGCATGACAGAAGGGAAAAAG-AGAAAATGCTGGCAAAGGAGAAACGGCCCTAAGAGGGAAGCCGGATCCCTAGCTGGGTCGGAGTAG-------------------ATGAGCGGGGAATGAGGGG-----CTGGAGGAT-------GCAGCTCCG---AGCGTGCAGGGGT-GGTGTGCTCTCGGGAG-GGAGCTGCTGC-----GGAGCTACCAAGGAGGGAGGCTGAGGGGTG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33940002 1099 + 185818997 CATGTCCTCAGC-TCTGTCCTCCAACCGGCTGCCCA-----------------GGAGGCCTCCCTGGCTGCTCCCCAAACTGCACATGCCCTGAGTCAGCCCTGGGG----CCTCATGGACCCTCCTCTGTTCACGCATCCCAGCAGTGCGCAAACCGTCCCTGTCGGCTCCCACTGACATGCTACAGGATCTCAGGGCAGCCCCGC-CTGGCAGGTTCAGCAGGGA----TGGGATTCTGTGTCCTTTTCCTTCTTGCTTCCGACCTTTACCTGAAGCT---CTAAC----ACCAAGAG--TGTGCCAGACAGAGGCGTCCACAG--TGACA-------------GGAGCCTGGGCAAGGGCGGCCATCCCCTGCTGCAGAGACGGAC-ATCAGTGTCCATGGAAACAACGCGGCGCGGGGAGCGGCAGGTCTGGTGTGAAAGCTACTCACACTTCCCGCCTGGGCAAGAGCAGGAACTCGGCAGGCAGAGAGCTGGT-GGAGCTTTCCAC-GGAAAACCACAACCTTCGAAGAGCCCGGCCTCCTTCTGACGAGCCACTTCTTTCCAATCAGATGCACTATTGACGAGGCAGCCTCCGCTGCCTGTCTCTCATCAGAGCA-------------CCTGGTAATTTATACTTGTGGTTTCCGCCTTGATCAATAAACACAATGGAGAAGACACACC--GTCGATTTCTACAGGAGGGGCAGAAGCACA----CAGGCCTGTGTGCAGAGCTT-CATTTGGGCTCTTCGGAAGGGAAGTAAACCCAGCAGAGGAAATGTCGGCCCGCTGAA--AGGGCAGCAGTTTCCCTTTCGCTGTGGGATTTGTGTTAGCAAGTTTGCAAGTGGAAAATGCATTTGGAACTGCCAGTCCCCTACAGCCCTCACA-GGGAGGTGCAATGTTAATCCTGTCACTATTTTAAAACTTGTCTCAGAGTTGGGAGTA----ACTGAAATCGTTTGGAGCTTAATTTTGCATGAGGACATAGCAAAGCATGACAGAAGGGAAAA---AGAAAATGCTGGCAAAGGAGAAACTGCCCTAAGAGGGCAGCCGGATCCTCAGCTGGGTCAGAGCAG-------------------ATGAGCCGAGACTGAGG--------------------------------------ACACAGGGGT-GGTGTGGTCTCGGGAG-GGACCTGCTGC-----GGAACCACTAAGGAGGGAGGCTGAGGGGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33556330 1099 + 192294377 CATGTCCTCAGC-TCTGTCCTCCAACCGGCTGCCCA-----------------GGAGGCCTCCCTGGCTGCTCCCCAAACTGCACATGCCCTGAGTCAGCCCTGGGG----CCTCATGGACCCTCCTCTGTTCACGCATCCCAGCAGCGCGCAAACTGTCCCTGTCGGCTCCCACTGACATGCTACAGGATCTCAGGGCAGCCCCGC-CTGGCAGGTTCAGCAGGGA----TGGGATTCTGTGTCCTTTTCCTTCTTGCTTCCGACCTTTACCTGAAGCT---CTAAC----ACCAAGAG--TGTGCCAGACAGAGGCGTCCACAG--TGACA-------------GGAGCCTGGGCAAGGGCGGCCATCCCCTGCTGCAGAGACGGAC-ATCAGTGTCCATGGAAACAACGCGGCGCGGGGAGCGGCAGGTCTGGTGTGAAAGCTACTCACACTTCCCGCCTGGGCAAGAGCAGGAACTCGGCAGGCAGAGAGCTGGT-GGAGCTTTCCAC-GGAAAACCACAACCTTCGAAGAGCCCGGCCTCCCTCTGACGAGCCACTTCTTTCCAATCAGATGCACTATTGACGAGGCAGCCTCCGCTGCCTGTCTCTCATCAGAGCA-------------CCTGGTAATTTATACTTGTGGTTTCCGCCTTGATCAATAAACACAATGGAGAAGACACACC--GTCGATTTCTACAGGAGGGGCAGAAGCACA----CAGGCCTGTGTGCAGAGCTT-CATTTGGGCTCTTCGGAAGGGAAGTAAACCCAGCAGAGGAAATGTCGGCCCGCTGAA--AGGGCAGCAGTTTCCCTTTAGCTGTGGGATTTGTGTTAGCAAGTTTGCAAGTGGAAAATGCATTTGGAACTGCCAGTCCCCTACAGCCCTCACA-GGGAGGTGCAATGTTAATCCTGTCACTATTTTAAAACTTGTCTCAGAGTTGGGAGTA----ACTGAAATCGTTTGGAGCTTAATTTTGCATGAGGACATAGCAAAGCATGACAGAAGGGAAAA---AGAAAATGCTGGCAAAGGAGAAACTGCCCTAAGAGGGCAGCCGGATCCTCAGCTGGGTCAGAGCAG-------------------ATGAGCCGAGACTGAGG--------------------------------------ACGCAGGGGT-GGTGTGGTCTCGGGAG-GGACCTGCTGC-----GGAACCACTAAGGAGGGAGGCTGAGGGGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4317344 1099 - 9440265 CATGTCCTCAGC-TCTGTCCTCCAACCGGCTGCCCA-----------------GGAGGCCTCCCTGGCTGCTCCCCAAACTGCACATGCCCTGAGTCAGCCCTGGGG----CCTCATGGACCCTCCTCTGTTCACGCATCCCAGCAGCACGCAAACTGTCCCTGTCGGCTCCCACTGACATGCTACAGGATCTCAGGGCAGCCCCGC-CTGGCAGGTTCAGCAGGAA----TGGGATTCTGTGTCCTTTTCCTTCTTGCTTCCGACCTTTACCTGAAGCT---CTAAC----ACCAAGAG--TGTGCCAGACAGAGGCGTCCACAG--TGACA-------------GGAGCCTGGGCAAGGGCGGCCATCCCCTGCTGCAGAGACGGAC-ATCAGTGTCCATGGAAACAACGCGGCGCGGGGAGCGGCAGGTCTGGTGTGAAAGCTACTCACACTTCCCGCCTGGGCAAGAGCAGGAACTTGGCAGGCAGAGAGCTGGT-GGAGCTTTCCAC-AGAAAACCACAACCTTCGAAGAGCCCGGCCTCCCTCTGACGAGCCACTTCTTTCCAATCAGATGCACTATTGACGAGGCAGCCTCTGCTGCCTGTCTCTCATCAGAGCA-------------CCTGGTAATTTATACTTGTGGTTTCCGCCTTGATCAATAAACACAATGGAGAAGACACACC--GTCGATTTCTACAGGAGGGGCAGAAGCACA----CAGGCCTGTGTGCAGAGCTT-CATTTGGGCTCTTCGGAAGGGAAGTAAACCCAGCAGAGGAAATGTCGGCCCGCTGAA--AGGGCAGCAGTTTCCCTTTCCCCGTGGGATTTGTGTTAGCAAGTTTGCAAGTGGAAAATGCATTTGGAACTGCCAGTCCCCTACAGCCCTCACA-GGGAGGTGCAATGTTAATCCTGTCACTATTTTAAAACTTGTCTCAGAGTTGGGAGTA----ACTGAAATCGTTTGGAGCTTAATTTTGCATGAGGACATAGCAAAGCATGACAGAAGGGAAAA---AGAAAATGCTGGCAAAGGAGAAACTGCCCTAAGAGGGCAGCCGGATCCTCAGCTGGGTCAGAGCAG-------------------ATGAGCCGAGACTGAGG--------------------------------------ACGCAGGGGT-GGTGTGGTCTCGGGAG-GGACCTGCTGC-----GGAACCACTAAGGAGGGAGGCTGAGGGGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16907908 1099 - 21915920 CATGTCCTCAGC-TCTGTCCTCCAACCGGCTGCCCA-----------------GGAGGCCTCCCTGGCTGCTCCCCAAACTGCACATGCCCTGAGTCAGCCCTGGGG----CCTCATGGACCCTCCTCTGCTCACGCATCCCAGCAGCGCGCAGACTGTCCCTGTCGGCTCCCACTGACATGCTACAGGATCTCAGGGTAGCCCCGC-CTGGCAGGTTCAGCAGGGA----TGGGATTCTGTGTCCTTTTCCTTCTTGCTTCCGACCTTTACCTGAAGCT---CTAAC----ACCAAGAG--TGTGCCAGACAGAGGCGTCCACAG--TGACA-------------GGAGCCTGGGCAAGGGCGGCCATCCCCTGCTGCAGAGACGGAC-ATCAGTGTCCATGGAAACAATGCGGCGCGGGGAGCGGCAGGTCTGGTGTGAAAGATACTCGCACTTGCCGCCTGGGCAAGAGCAGGAACTCGGCAGACAGAGAGCTGGT-GGAGCTTTCCAC-GGAAAACCACAACCTTCGAAGAGCCCGGCCTCCCTCTGACGAGCCGCTTCTTTCCAATCAGATGCACTATTGACGAGGCAGCCTCCACTGCCTGTCTCTCATCAGAGCA-------------CCTGGTAATTTATACTTGTGGTTTCCACCTTGATCAATAAACACAATGGAGAAGACACACC--GTCGATTTCTACAGGAGGGGCAGAAGCACA----CAGGCCTGTGTGCAGAGCTT-CATTTGGGCTCTTCGGAAGGGAAGTAAACCCAGCAGAGGAAATGTCGGCCCGCTGAA--AGGGCAGCAGTTTCCCTTTCCCCGTGGGATTTGTGTTAGCAAGTTTGCAAGTGGAAAATGCATTTGGAACTGCCAGTCCCCTACAGCCCTCACA-GGGAGGTGCAATGTTAATCCTGTCACTATTTTAAAACTTGTCTCAGAGTTGGGAGTA----ACTGAAATCGTTTGGAGCTTAATTTTGCATGAGGACATAGCAAAGCATGACAGAAGGGAAAA---AGAAAATGCTGGCAAAGGAGAAACTGCCCTAAGAGGGCAGCCGGATCCTTGGCTGGGTCAGAGCAG-------------------ATGAGCCGGGACTGAGG--------------------------------------ACGCAGGGGT-GGTGTGGTCTCAGGAG-GGACCTGCTGC-----GGAACCACTAAGGAGGTAGGCTGAGGGGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 47322 1118 - 21531802 CATGTCCTCAGC-TCTGTCCTCCAACCGGCTGCCCAGCTCTGTCCTCCAACCGGCTGCCCTCCCTGGCTGCTCCCCAAACTGCACATGCCCTGAGTCAGCCCTGGGG----CCTCATGGACCCTCCCCTGCTCATGTATCCCAGCAGCACGCAAACTGTCCCTGTTGGCTCCCACTGAAATGCTACAAGATCTCCGGGCAGCTCCGC-CTGGCAGGTTCAGAAGGGA----TGGGGTTCTGCGCCCTTTTCCTTCTTGCTTCCGACCTTCACCTGGGGCT---TTAAC----ACCAAGAG--TGTGCCAGACACAGGTGTCCACAG--CGACA-------------GGAGCCTGGGCAAGGGCGGCTGTCCCCTGCTGCAGAGAGGGAC-GTCAGTGTCCATGGAAACACCGCGGCGCGAGGAGCGGCAGGTCTGGTGTGAAAGCTACTCGCACTTCCCGCCTGGGCAAGAGTGGGAACTCGGCAGGCAGAGAGCTGGT-GGAGCTTTCCAC-GGAAAACCACCACCTTCAAAGAGCCCGGCCTCCCTCTGACGAGCCACTTCTTTCCAATCAGATGCATTATTGACGAGGCAGCCTCCTCTGCCTGTCTCTCAACAGAGCA-------------CCTGGTAATTTATACTTGTGGTTTCGGCCTTGATCAATAAACGCAACAGAGAGGACACACC--GTCGATTTCTACAGGAGGGGCAGAAGCACA----CAGGCCTGTGTGCAGAGCTT-CATTTGGGCTCTTCGGAAGGGAAGCAAACCCAGCAGAGGAAATGTCGGCCCGCTGAA--AGGGCAGCAGTTTCCCTTTCCCCGTGGGATTTGTGTTAGCAAGTTTGCAAGTGGAAAATGCATTTGGAACTGCCAGTCCCCCACAGCCCTCACA-GGGAGGTGCAATGTTAATCCTGTCACTATTTTAAAACTTGTCTCAGAGTTAAGAGTA----ACTGAAATCGTCTGGGGCTTAATTTTGCATGAGGCCATAGCAAAGCATGACAGAAGGGAAAAAG-AGAAAATGCTGGCAAAGGAGAAACGGCCCTAAGAGGGCAGCCGGATCGCTGGCTGGGTCAGAGCAG-------------------ATGAGCCGGGACTGAGG--------------------------------------ACGCAGCAGT-GGTGTGGTCTCGGGAG-GGACCTGCTGC-----AGAACGACTAAGGAGGGAGGCTGAGGGGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 71471 1099 - 2515279 CATGTCCTCAGC-TCTGTCCTCCAACCGGCTGCCCA-----------------GGAGGCCTCCCTGGCTGCTCCCCAAACTGCACATGCCCTGAGTCAGCCCTGGGG----CCTCATGGACCCTCCTCTGCTCACGCATCCCAGCAGCGCGCAGACTGTCCCTGTTGGCTCCCACTGACATGCTACAGGATCTCAGGGCAGCCCTGC-CTGGCAGGTTCAGCAGGGA----TGGGATTCTGTGTCCTTTTCCTTCTTGCTTCCGACCTTTACCTGAAGCT---CTAAC----ACCAAGAG--TGTGCCAGACAGAGGCGTCCACAG--TGACA-------------GGAGCCTGGGCAAGGGCGGCCATCCCCTGCTGCAGAGACGGAC-ATCAGTGTCCATGGAAACAACGCGGCACGGGGAGCGGCAGGTCTGGTGTGAAAGATACTTGCACTTGTCACCTGGGCAAGAGCAGGAACTCGGCAGGCAGAGAGCTGGT-GGAGCTTCCCAC-GGAAAATCACAACCTTCGAAGAGCCCGGCCTCCCTCTGATGAGCCGCTTCTTTCCAATCAGATGTACTATTGACGAGGCAGCCTCCACTGCCTGTCTCTCATCAGAGCA-------------CCTGGTAATTTATACTTGTGGTTTCCACCTTGATCAATAAACACAATGGAGAAGACACACC--GTCGATTTCTACAGGAGGGGCAGAAGCACA----CAGGCCTGTGTGCAGAGCTT-CATTTGGGCTCTTCGGAAGGGAAGTAAACCCAGCAGAGGAAATGTCGGCCCGCTGAA--AGGGCAGCAGTTTCCCTTTCCCCGTGGGATTTGTGTTAGCAAGTTTGCAAGTGGAAGATGCATTTGGAACTGCCAGTCCCCTACAGCCCTCACA-GGGAGGTGCAATGTTAATCCTGTCACTATTTTAAAACTTGTCTCAGAGTTGGGAGTA----ACTGAAATCGTTTGGAGCTTAATTTTGCATGAGGACATAGCAAAGCATGACAGAAGGGAAAA---AGAAAATGCTGGCAAAGGAGAAACTGCCCTAAGAGGGCAGCCGGATCCTCGGCTGGGTCAGAGCAG-------------------ATGAGCCGGGACTGAGG--------------------------------------ACGCAGGGGT-GGTGTGGTCTCGGGAG-GGACCTGATGC-----GGAACCACTAAGGAGGTAGGCTGAGGGGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 228069 1101 + 6586416 CATGTCCTCAGC-TCTGTCCTCCAACCGGCTGCCCA-----------------GGAGGCCTCCCTGGCTGCTCCCCAAACTGCACATGCCCTGAGTCAGCCCTGGGG----CCTCATGGACCCTCCCCAGCTCACGCATCCCAGCGGCGCGCGAACTGTCCCTGTCGGCTCCCACTGAAATGCTACAGGATCTCAGGGCAGCTCCAC-CTGGCAGGTTCGGGAGGGA----TGGGGTTCTGTGTCCTTTTCCTTCTTGCTCACGACCTTCACCTGGGGCT---CTAAC----ACCAAGAG--TGTGCCAGACAGAGGCGTCCACCG--CGACA-------------GGAGCCTGGGCAAGGGCGGCCGTCCCCTGCTGCAGAGACGGAC-GTCAGTGTCCATGGAAACAATGCAGCACGGGGAGCGGCAGGTCTGGTACGAAAGCCACTCGCACTTCCCGCCTGGGCAAGAGCAGGAACTCGGCAGGCAGAGAGCTGGT-GGAGCTTTCCAC-GGAAAACCACAGCCTTCGAAGAGCCCGGCCTCCCTCTGACAAGCCGCTTCTTTCCCATCAGATGCACTATTGACGAGGCAGCCTCCTCCGCCTGTCTCTCATCAGAACA-------------CCTGGTCATTTATACTTGTGGTTTCGGCCTTGATCAATAAACGCAACGGAGACGACACACC--GTCGATTTCTATAGGAGGGGCAGAAACGCA----CAGGCCTGAGTGCAGAGCTT-CGTTTGAGCTCTTCGGAAAGGAAGCAGACCCAGCAGAGGAAACGTCGGCCCACAGAA--AGGTCGGCAGTTTCCCTTTCCCCGTGGGATTTGTGTTAGCAAGTTTGCAACTGGAAAATGCGTTTGGAACTGCCAGTCCCCTGAAGCCCTCACA-GGGAGGTGCAATGTTAATCCTGTCGCTATTTTAAAACTTGTCTCAGAGTTGGGAGTA----ACTGAAATCGTTTGGGGCTTAATTTTGCAGGAGGACATAGCAAAGCGTGACAGAAGGGAAAAAG-AGAAAATGCCGGCAAAGGAGAAACGGCCCTAAGAGGGCAGCCAGATCGCTGGCCGGGCCAGAGCAG-------------------AGGAGCCGGGACTGAGG--------------------------------------ACTCAGTGGT-GGTGTGTTCTCGGGGG-GGACCCGCTGC-----GGAACCACTAAGGAGGGAGGCTGAGGGGCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146592914 1137 - 204313951 CAGACCCTCAGC-TCTGTCCTCCAACCAGCTGCCCA-----------------GGAGGCCTCCCTAGCTGCTCCCAAAACTGCACATGCCCCGAGTCAGCCCCGGGG----CTTCATGGACTCCCTGC-GCTCACGCACCACAGCAGTGTGCAAACCCTCCCTGTCAGCTCTCACTGAAGTGCTACAGGATCTCAGGGCAGCTTCAC-CATGCAGGTTCAGAAGGGA----TGGGATTCTGTGTCCTTTTCTGTCTTGCTTCAGACCTGCACCTGGGGCT---CTAAC----ACCAAAAGTCTGTGCCAGGCAGAGGCATC--CAG--AGACA-------------GGAGCCTGGGCGAGGGCGGTCAT-CACCACTGCAGAGATGAAT-GTCAGCGTCCATGGAAACCATTTGGTGCGGTGAGCGGCAGGTCTGATATAAAGGCTGCTTGTACTTCCCGTCTGGGCAAGAGCAGGAACTTGGCAAGCAGAGAGCTGGT-GGAGGTTTCCAAGGGAAAACCAGAACCTTCAAAGAGCCCAGCCTCCCTCTGATCAGCCCCTTCTTTCCAATCAGATGCATCATTAATGAAGCAGCCTCCTCCACCTGTCTTTCATCAGAGCAGCTCGCTTCCCACCATGGTAATTTATACTTGTGATTTTGGTCTTGATCGATAAAGGCAACGGAGAAGACTTGCCCATTCAATTTCGACAGGAGGGGCAGAAATGCA----CAGGCCTCTGTGCAGAGCTTCCATTTGCGCTCTTTTGAAGGGAAGCAAATCCATCAGAGGAAATATCTGCATGCTGAA--AGGTCAGCAGTTTCCTTTTCCCCGTGGGATTTGTGTTAGCAAGTTTGCAAGTGGAAA-TGCATTTGGAACTGCCAGTCCCTTACAGCCCTCACATGGGAGGTGCGATGTTATTCCTGTCACTATTTTAAAACCTGTCTCAGGGTTGGGAATA----ACTGAAATCGTTTTGGGCTTAATTTTGCATGAGGACATAGCAGAGCATGACAGAAGGAAAAAAG-AGAAAACGCTGGCAAAGGATAAGTGGCCCGAAGAGGGAAGCCGGAACCCTGGCTGGGTCAGAGTAG-------------------GTGAGCAGGGAACGAGGAG-----CTGAAGGGT-------GCAGCTCCG---AGCGTGT-GGGGT-GGTATACTCTCAGGAG-GGG-TTGCTGT-----GGAATGACAAATGAGGGAAGTTGAGGGGTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 438757 1137 - 2125214 CATGTCCTCAGC-TCTGT-CTCCAACCAGCTGCCCA-----------------GGAGGCTTCCCTGGCTGCTCCCAAAACTGCACATGCCCTGAGTCAGCCCCGGGG----CCTCATGGGCTCCCTGCTGCTCACACACCATGGCAGTGTGCAAACCCTCCCTGTCAGCTCTCACTGAAATGTTACAGAATCTCAGGGCAACTCCAC-CACGCAGGTTCAGAAGGGT----TGGGATTCTGTGTCCTTTTAATTCTTGCTTCAGACCTGCACCTGGGGCT---CTAAC----ACCAAAAGTCTGTGCCAGGCAGAGGCATCCACAG--AGACA-------------AGAGACTGGGTGAGGGTGGCTAT-CGCCACTGCAGAGACAAAT-GTCAGCGTCCATGGAAACCATTCGG-GTGGCGAGCGGCAGGTCTGATATAAAGGCTGCTTGTACTTCCTGTCTGGGCAAGAGCAGGAACTTGGCAGGCAGAGAGCTGGT-GAAGTTTTCCGTGGGAAAACCAGAACCTTCAAGGAGCCCAGCCTCCCTCTGATCAGCCCCTTCTTTCCAATCAGATGCATTATGAATGAGGCAGCCTCCTCCACCTGTCTTTCATCAGAGCAGCTGGCTTCCCACCGTGGTAATTTATACTTGTGATTTTGGCCTTGATTGATAAAGGCAACGGAGAAGACTTGCCCGTTCAATTTTGACAGGAGGGGCAGAAATGCA----CAGGCCTCTGTGCAGAGCTT-CATTTGCGCTCTTTTGAAGGGAAGCAAATCCATCAGAGGAAATATCTGCACGCTGAA--AGGTCAGCAGTTTCCTTTTCCCCTTGAGATTTGTGTTAGCAAGTTTGCAAGTGGAAAGTGCATTTGGAACTGCCAGTCCCTTACAGCCCTCACATGGGAGGTGCGATGTTATTCCTGTCACTATTTTAAAACTTGTCTCAGGGTTGGGAGTA----ACTGAAATCGTTTTGGGCTTAATTTTGCATGAGGACATAGCAGAGCATGAT-GGAGGAAAAAAG-AGAAAATGCTGGCAAAGGAGCAGTGGCCCGAAGAGGGAAGCTGGAACCCTGGCTGGGTCAGAGTAG-------------------GTGAGCAGGGAATAAGGAG-----CTGGAGGGT-------GCAGCTCCG---AGCGTGT-GGGGT-AGTGTACTCTCAGGAG-GGG-CTGCTGT-----GAAATGACTAAGGAGGGAAGCTGACGGGTG i cebCap1.NW_016107703v1 C 0 I 17 s aotNan1.NW_018514293v1 52521 1059 + 376347 CACGTCCTCAGC-TCTGTCCTCCAACCAGCTGCCCA-----------------GGAGGCCTCCCTGGCTGCTCCCAAAACTGCACATGCCCTGAGTCAGCCCCGGGG----CCTCATGGACTCCCCGCTGCTCACGCACCAGGGCAGTGTGCAAACCCTCCCTGTGAGCTCTCACTGAAATGCTACAGGATCTCAGGGCAGCTCCAC-CACGCAGGCTCAGAAGGGA----TAGGATTCTGTGTCCTTCTACTTCTCGCTTCAGACCCGCACCCGGGGCT---CTAAC----GCCA---------------------------CAG--AGACA-------------GGAGCCTGG----------------------GCAGAGATGAAC-GTCGGCGTCCATGGAAACCGTTCAG-GTGGTGAGCGGCAGGTCTGATATAAAGGCCGCTTGTACTTCCCGTCTGGGCGAGAGCAGGAACTTGGCAGGCAGAGAGCTGGT-GAAGTTTTCCATGGGAAAACCAGAACCTTCAAAGAGCCCAGCCTCCCTCTGATCAGCCCCTTCTTTCCAATCAGATGCATCATTAATGAGGCAGCCTCCTCCACCTGTCTTTCCTCAGAGCAGCCGGCTTCCAACCGTGGTAATTTATACTTGTGATTTTGGCCTTGATCGATAAAGGCAACGGAGAAGACTTGCCCGTTCGATTTCGACAGGAGGGGCAGAAATGCA----CAGGCCTCTGTGCAGAGCTT-CATT--CGCTCTTTTGAAGGGAAGCAAATCCATCAGAGGAAATATCCGCACGCCGAA--AGGTCAGCAGTTTCCTTTTCCCCGTGGGATTTGTGTTAGCAAGTTTGCAAGTGG------------------------------AGCCCTCACGTGGGAGGTGCGATGTTATTCCTGTCACTATTTTAAAACTTGTCTCAGGGTTGGGAGTA----ACTGAAATCGTTTTGGGCTTAATTTTGCATGAGGACATAGCAGAGCATGACAGAAGGAAAAAAG-AGAAAATGCTGGCAAAGGAGAAGTGGCCCGAAGAGGGAAGCCGGAACCCCAGCTGGGTCAGAGTAG-------------------GGGAGCGGGGAATAAGGAG-----CCGGAGGGT-------GCAGCTCCG---AGCGTGT-GGGGT-GCGGTTCTCTCAGGAG-AGG-CTGCTGC-----GGAATGACTGGGGAGGGAAGTTAAGGGGTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2173787 1072 - 8137123 ---GTCGTCAG----------------------CCA-----------------G------------------------------CCTTCCCTGAGTCAGCCCCAGGGCTTCCTTCGTAGGCTGTGCCCTGTGCATGTGCCACTGCAATGTGCAAATTTCCCCTGTGGGATTCCGCCGAAATGTCACAGGATCCTGTGGCAGCTCCAC-CAGACAGGTTCAGAAAGGA----TGGGATTTTGTGT-CTTTTCCTTCTTGTTTCAGGTCTACATCTGAGGCT---CCAGC----ACCAAAAGACTGTGCCAGGCACA-GTGTCCCCAG--AGACA------------GGGAGCCTGGGCAAGGGCACCTAC----AGCCTTGGAGATGGA--ACTGGTGTCCCCCGAGAAGATTCAGCACAGAG---TGCAGGCCTGACA-------------------CTGATTCAGATAGGTCTGGAA----------------------GGAGATTTCCCT-GGGATGCCAGAACTTTCCAAGAGGCCAGCTTCCCTCTGATCAGGC-CTTCTCCCCAGCTGGATGCATTATTGACGAGGAGCCCCTCCCCATCTAACCCCCGCGAGAGCGTCTCATTTCCCTCCATGATAATTTATACTTGTAATTTTGGCCTTGGTCAATAAAGGCAACAGA---GATTTACCCGTTCAATTTCAGCAGGAGGGGCAGAGACTCACAGGCAGGCATCCGTGCCGAGCTT-GCTTTGGACTCCTCTAAAGGGAAGCAGAGCCATCAGAGGAAATATTTGCACACTGAAATAGGTCAGCAATTTCCTTGTCCCTGTGGGAT-TGTGTTAGCAAGTTTGCAAGTGGAAAATGCATTTGGAACTGCCAGTGCCTTACAACCCTCAAATGGGAAGTGGGATGTTAATCCTGCCGCTATTTTAAAACTGGTCTCGGGGTTGGGAGTA----ATTGAAATCGTTTGGGGCTTAATTTTGCATGAGGATGAGGCAAAGTGTGGCAGGACAGGAAG---AGGAATCACTGGCAAAGGACAAGTGGCCC-AAGAGGGTGGC-GGGGCCCCAGTCTGGTCAGGGCAGCATCACACTAGGCAGATGTGGGAGCCAGGAGCTAGAGGGGACACTCGAGTGTAGGAGCAGCAGCTTGGGACAGCTCTCCAGAGC-TGAGTGCTGTCGGGAG-GA--TGGCTGT-----GGACAGGCTGACCTGGAAGGCAAAGGAGTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60986708 1066 - 77573801 CATTCCCTTAGCTTCCGCCCTCCCACCAGTGGTTTA-----------------GGAGGCCTTCCTACCTGCC----------------CCTTGGTTGAGCCTTTGCA----CA-------------------AACGAATCTC--CAACAACCGCACATGCCCTG-GGGCCCTCACAGCAGCCTTCCTG--CCTAATTGCAGCTCCACACCAGCAGGCT--GCAGGGAAGTGTGGGATCTGGCGTCCTTTCCCATCTTGTTTCCAACCTACATCTGGGACTGACCTGATGGCAACCAAAGGTCTGTG-AGGACAGAGATACCTACAGGATGAGATGAGGAGATTCAGGAAGCCTGAGCAAGAGAGGGCAT-CACAGTCAAAGAGACAAATAACCAACTTCCATGAACAC-------TACAGCGAGCGACCTGTC--------------ACCACACTGGCTCTTAGGGCG-GAGCAGG-ACCTGGCAGCGAGTGAGCTGATAGGAGGTGTCCAC-AGGAACACA--------GAAGGGACCAACGTCCTCCTGTCTAGCTCAT--CTCCTGACTGGATGCATTACTGG------GGCCTCCCCCCTGCACCCTTTATGACGGCATCTGGCTTCCCGCCTCAGTAATTGAAATTTGAAATTT-GGCCTTGATCAATAAAGGCAGCGGAGAAGAGAAACACATTAAATTTTCCCA-GAAGGGCAGACACAAG----CAGAGATCTCTGCAGAGCTT-TATTTGGACCCTTCT-AAGGGAAGCAAACCCATCAGAGGAAAT----------------AGATGAGCGATTTCCCTTTCCCTGTGGGATTGACGCTAGTAAGTTTGTAAATGGAAAAGGCAGTCGCCGCCACCAGT-CTTTACAGCCCCCGACTGCGAAGTGGGATGCTCGTCCTGTTGCTATCTTAAAACCTGTCTCAGGGGTGGGAGTACCTGCCTGAAATTGGCTTGGACTTAATTTTGCATGACGATGTAGTGAAGTGTGTCAGGAGGAGACACGAAGAAAATGCTGGCAAAGGCAAAGAGGCCGTAAGAGGG-ACCCAGAGCCAGTCTGGGCTCAGAGAAGC------------------ATAAACCGCAGGGCGGGCG---------------------GCAGAAGCC------AGACGGGAGTGGGTGTGAGTGCGGGTGTGGACGTGCTACTCAGAGAGACCAC-----AGGGAAGCAGAAGCAGG i canFam3.chr6 I 2550 C 0 e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=182957.000000 s hg38.chr7_KI270899v1_alt 74002 46 + 190869 GGAGAAAGCCCA-GGGCTGTAATC-------GTAGCC----CCTGGAGCCTGATTTAA s gorGor5.CYUI01015914v1 35153 46 - 432965 GGAGAAAGCCCA-GGGCTGTAATC-------GTAGCC----CCTGGAGCCTGATTTAA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941101 46 + 185818997 GGAGAAAGCCCA-GGGCTGTAATC-------GTAGCC----CCTGGAGCCTGATTTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33557429 46 + 192294377 GGAGAAAGCCCA-GGGCTGTAATC-------GTAGCC----CCTGGAGCCTGATTTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4318443 46 - 9440265 GGAGAAAGCCCA-GGGCTGTAATC-------GTAGCC----CCTGGAGCCTGATTTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16909007 46 - 21915920 GGAGAAAGCCCA-GGGCTGTAATC-------GTAGCC----CCTGGAGCCTGATTTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 48440 46 - 21531802 GGAGAAAGCCCA-GGGCTGTAATC-------GTAGCT----CCTGGAGCCTGATTTAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 72570 46 - 2515279 GGAGAAAGCCCA-GGGCTGTAATC-------GTAGCC----CCTGGAGCCTGATTTAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 229170 46 + 6586416 GGAGAAAGCCCA-GGGCTGTCATC-------GTAGCC----CCTGGAGCCTGATTTAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146594051 26 - 204313951 ---------------------ATT-------GTAGCC----TCTGGAGCCTGATGTAG i calJac3.chr2 C 0 I 3 s aotNan1.NW_018514293v1 53580 25 + 376347 ---------------------ATC-------GTAGCC-----CCGGAGCCTGATGTAG i aotNan1.NW_018514293v1 C 0 I 3 s otoGar3.GL873611 2174859 45 - 8137123 --AGAGGGATCACTGGCTGCCATC-------GTGGCT----CCTGGGGTCTGACTGGG i otoGar3.GL873611 C 0 I 3 s canFam3.chr6 60987774 54 - 77573801 AGAGGAGGCACA-AGGCCGTGATTACACAGGGTAGACGTGGCCTTGAGGCTGTTC--- i canFam3.chr6 C 0 C 0 e cebCap1.NW_016107703v1 439894 17 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1092262.000000 s hg38.chr7_KI270899v1_alt 74048 217 + 190869 AAGACTGGAGGAGGCAAAACCTTTCCT-GGGTGACATCCATCCAGGGCATGA---CCCTGCGGCCTCCGTGTCTGCTGTGGGCGAGGCTGTCCCTGCAGCCAGCCCTGCCCCCATC-----CCTTCCCTT---CTAGGGATGTTGGAGTGTG-GGGCAGCCCAGCT----TCTGCCCACAGCACAGATGAGGAACTGAGGATGCAGGGGCCCGTGGGGGACGGCACACGGTCAG s gorGor5.CYUI01015914v1 35199 217 - 432965 AGGACTGGAGGAGGCAAAACCTTTCCT-GGGTGACATCCATCCAGGGCATGA---CCCTGCGGCCTCCGTGTCTGCTGTGGGCGAGGCTGTGCCTGCAGCCAGCCCTGCCCCCATC-----CCTTCCCTT---CTAGGGATGTTGGAGTGTG-GGGCAGCCCGGCT----TCTGCCCACAGCACAGATGGGGAACTGAGGATGCAGGGGCCCGTGGGGGACGGCACACGGTCAG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941147 218 + 185818997 AAGACTGGAGGAGGCAAAACCTTTTCT-AGGTGACATCCACCCAGAGCGTGA---CCCTGTGGCCTCAGTGTCTGC--TGGGCACGGCTCTGCCTGCAGCCAGCCCTGCCACCATC-----CCTTCCCTT---CTAGAGGTGTCCGAGTGTG-GGGCAGCCAGGCTGCTGTCTGCCCACAGCACAGAGGAGGAACTGAGGACGCA-GGGCCCGTGCGGGACGGCACGCGGTCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33557475 218 + 192294377 AAGACTGGAGGAGGCAAAACCTTTTCT-AGGTGACATCCACCCAGAGCGTGA---CCCTGTGGCCTCAGTGTCTGC--TGGGCACGGCTCTGCCTGCAGCCAGCCCTGCCACCATC-----CCTTCCCTT---CTAGAGGTGTCCGAGTGTG-GGGCAGCCAGGCTGCTGTCTGCCCACAGCACAGAGGAGGAACTGAGGACGCA-GGGCCCGTGCGGGACGGCACGCGGTCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4318489 218 - 9440265 AAGACTGGAGGAGGCAAAACCTTTTCT-AGGTGACATCCACCCAGAGCGTGA---CCCTGTGGCCTCAGTGTCTGC--TGGGCACGGCTGTGCCTGCAGCCAGCCCTGCCACCATC-----CCTTCCCTT---CTAGGGGTGTCCGAGTGTG-GGGCAGCCAGGCTGCTGTCTGCCCACAGCACAGAGGAGGAACTGAGGACGCA-GGGCCCGTGCGGGACGGCACGCGGTCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16909053 218 - 21915920 AAGACTGGAGGAGGCAAAACCTTTTCT-AGGTGACATCCACCCAGAGCGTGA---CCCTGTGGCCTCAGTGTCTGC--TGGGCACGGCTCTGCCTACAGCCAGCCCCGCCACCATC-----CCTTCCCTT---CTAGGGGTGTCCGAGTGTG-GGGCAGCCAGGCTGCTGTCTGCCCACAGCACAGAGGAGGAACTGAGGACGCA-GGGCCCATGCGGGATGGCACGCAGTCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 48486 218 - 21531802 AAGACTGGAGGAGGCAAAACCTTTTCT-AGGTGACATCCACCCAGAGCGTGA---CCCTGTGGCCTCAGTGTCTGC--TGGGCACGGCTCTGCCTGCAGCCAGCCCCGCCACCATC-----CCTTCCCTT---CCAGGGGTGTCCAAGCGTG-GGGCAGCCAGGCTGCTGTCTGCCCACAGCACAGAGGAGGAACTGAGGACGCA-GGGCCCGTGGGGGACGGCACGTTGTCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 72616 218 - 2515279 AAGACTGGAGGAGGCAAAACCTTTTCT-AGGTGACATCCACCCAGAGCGTGA---CCCTGTGGCCTCAGTGTCTGC--TGGGCACGGCTCTGCCTGCAGCCAGCCCCGCCACCATC-----CCTTCCCTT---CTAGGGGTGTCCGAGTGTG-GGGCAGCCAGGCTGCTGTCTGCCCACAGCACAGAGGAGGAACTGAGGACGCA-GGGCCCGTGCGGGACGGCACGCAGTCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 229216 223 + 6586416 AAGCCTGGAGGAGGCAAAACGTTTTCT-AGGTGACATCCACCCAGAGCGTGA---CCCTGTGGCCTCAGTGTCTGC--TGGGCCCGGCTCTGCCTGCAGCCAGCCCCGCCGCCATCCCTTTCCTTCCCTT---CCCGGCGTGTCTGAGCGTG-GGGCCGCCGGGCTGCTGTCTGCCCACAGCACAGAGGAGGAACTGAGGACGCA-GGGCCCGTGGGGGACGGCACGCGGTCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146594080 216 - 204313951 AAGCCTGGAGGAGGCAAAACCTTTGCT-GGGTGACATCCATCCAAAGTGTGA---CCCTATGGCTTCAGGATCTGC--TGGACGTGGCTCTGCATGTAGCTAGCCCCACCCTCATC-----CCTTCCCTT---CTACTTACGTCAGAGAGTGCAGGCAGCTGGGCT----TCTGCCCACAGCACAGATGAGGAACTGAGGATACAGGGGCCTGTGGGGGAAGGCACGCAGTCAC i calJac3.chr2 I 3 C 0 s cebCap1.NW_016107703v1 439911 215 - 2125214 AAGCCTGGAAGAGGCAAAACCTTTGCT-GGGTGACATCTATCCAGAGCGTGA---CCCTACGGCCTCAGGGTCTGC--TGGACATGGCTCTGCATGTAGCTAGCCCCGCCCTCATC-----CCTTCCCTT---CTACGGATGTCAGACTGTGCAGGCAGCTGGGCT----TCTGCCCACAGCA-AGATGAGGAACCGAGGATACAGGGGCCTGTGGGGGAAGACACACAGTCAC i cebCap1.NW_016107703v1 I 17 C 0 s aotNan1.NW_018514293v1 53608 215 + 376347 AAGCCTGGAGGAGGCAAACCCTCTGCT-GGGTGACATCCCTCCACAGCGCGA---CCCTGCGGCCACAGGGTCTGC--TGGACACGGCTCTGCGTGTAGCCAGCGCCGCCCCCATC-----CCTTCCCTT---CTACGGATGTCAGAGTGTGCAGGCAGCTGGGCT----TCTGCCCACAGCACAGACGGGGAACTGAGGATGCA-GGGCCTGCAGGGGAAGGCGCACAGTCAC i aotNan1.NW_018514293v1 I 3 C 0 s otoGar3.GL873611 2174907 185 - 8137123 GGGCCCCAAGGAGGCAAAAC-TTTTCT-GGGTGAGTGCCATGTAAAGTGTGA----CCTATGGCCTTGGTGCTTGC--TCTGTGAG--TCTGCATGTGGCCAGCTAC-CCTCCCTG-----CCTTCCCTTCTCCTCGGGACCTGGGAGAGTG-GA------------------GACCACAGAGCAGAGGAGGAACTAG--------GGGCTT------GACGGCATGTGGTCAG i otoGar3.GL873611 I 3 C 0 s canFam3.chr6 60987828 138 - 77573801 --------------------CTTTGCTCAGGTGACATTTGCCCTGCGTGTGATCTCTCTGTGGC-TCGG----CAC--AAGGCCGGGCACTGCCCGC--------------CCATT-----CGTTCCCTT---CTCCCCATGAC-------G------------------CCTGCC------ACGGATGAGGAACCACGGAAGTGAGGGC----AGAGGTCG------------ i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=332812.000000 s hg38.chr7_KI270899v1_alt 74265 59 + 190869 CCCAGAATTAGGACCTAAGGTTGGCCCTATGGGTTCCTGCAGCACAGACGTGCAGCATG-- s gorGor5.CYUI01015914v1 35416 59 - 432965 CCCAGAATTAGGACCTAAGGTTGGCCCTAGGGGTTCCTGCAGCACAGACGTGCAGCATG-- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941365 59 + 185818997 CCCAGAATTAGGACCTAAGGTTGACCCTACAGGTTCCCACAGCACACACATGCAGCACG-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33557693 59 + 192294377 CCCAGAATTAGGACCTAAGGTTGACCCTACAGGTTCCCACAGcacacacatgcagcacg-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4318707 59 - 9440265 CCCAGAATTAGGACCTAAGGTTGACCCTACAGGTTCCCACAGCACACACATGCAGCACG-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16909271 59 - 21915920 CCCAGAATTAGGACCTAAGGTTGACCCTACAGGTTCCCACAGCACACACATGCAGCACG-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 48704 59 - 21531802 CCCAGAATTAGGACCTAAGGTTGACCCTACAGGTTCCCACAGCACACACATGCAGCACG-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 72834 59 - 2515279 CCCAGAATTAGGACCTAAGGTTGACCCTACAGGTTCCCACAGCACACACATGCAGCACG-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 229439 59 + 6586416 CCCAGAATTAGGACCTAAGGTTGGCCCTACCGGTTCCCGCAGCGCAGacacgcagcacg-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146594296 59 - 204313951 CCCAGAATTAGGACCCAAGGTTGACCCTACAGGTTCCTGCAGCAAAGACGTGCAGcatg-- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 440126 59 - 2125214 CCCAGAATTAGGACCCAAGGTTGACCCTACAGGTTCCTGCAGCAAAGACGTGCAGCATG-- i cebCap1.NW_016107703v1 C 0 I 566 s aotNan1.NW_018514293v1 53823 59 + 376347 CCCAGAATTAGGGCCCAAGGTTGGCTCTACACGTGCCCGCAGCAAAGATGTGCAGCATG-- i aotNan1.NW_018514293v1 C 0 I 236 s canFam3.chr6 60987966 59 - 77573801 -TCTGGGATAAAACCCAAGGTCAACGCTACGGTTTCCcacagcacactcacac-gcgtgca i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2175092 0 - 8137123 C e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=209546.000000 s hg38.chr7_KI270899v1_alt 74324 60 + 190869 T--------------------------GCA---CCCACATGTACA----------------CACAATCAGGCATAGCCACAGAGAATCAcaccctcccacgcaca s gorGor5.CYUI01015914v1 35475 60 - 432965 T--------------------------Gca---cccacatgtaca----------------cacaaccaggcatagccacagagaatcacaccctcccacgcaca i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941424 74 + 185818997 T--------------------------GCA---TGCACATGTACACAGAGGCACATGCACACACAATCATGCCTAGCCAT--AGATTCACACCCTCCCACTCACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33557752 74 + 192294377 t--------------------------gca---tgcacatgtacacagaggcacatgcacacacaatcatgcctagccat--agattcacaccctcccactcaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4318766 74 - 9440265 T--------------------------GCA---TGCACATGTACACAGAGGCACATGCACACACAATCATGCCTAGCCAT--GGAATCAcaccctcccactccca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16909330 74 - 21915920 T--------------------------GCA---TGCACATGTACACAGAGGCACATGCACACACAATCATGCCTAGCCAC--AGAATCAcaccctcccactcaca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 48763 99 - 21531802 TGCACGCATGCACATGTACACAGAGGCGCA---TGCACATGTACACAGAGGCACATGCACGCACAATCG-GCCTAGCCAC--AGAATCACACCCTCCCACTGACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 72893 74 - 2515279 T--------------------------GCA---TGCACATGTACACAGAGGCACATGCACACACAATCATGCCTAGCCAC--AGAATCAcaccctcccactcaca i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 229498 73 + 6586416 t--------------------------gca---cgcacatgtacacagaggcacacgcacacacagtca-gcctagccac--agaatcacaccctcccactcaca i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146594355 79 - 204313951 --------------------------cacacaccacacatatacacagatgcacaggcacacacaatcatgcatagccatacagaatcacaccttcccactcaca i calJac3.chr2 C 0 I 4 s canFam3.chr6 60988025 59 - 77573801 --------------------------cgcg---cacacacttaca------------cacacccaagcatgcccacacgc--agaaacacac---cacgctcaca i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2175092 0 - 8137123 C e aotNan1.NW_018514293v1 53882 236 + 376347 I e cebCap1.NW_016107703v1 440185 566 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=95183.000000 s hg38.chr7_KI270899v1_alt 74384 23 + 190869 cccacacc----------------------------cacacacc-ctc-ccac s gorGor5.CYUI01015914v1 35535 23 - 432965 cccacacc----------------------------cacacacc-ctc-ccac i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941498 23 + 185818997 CTCACACC----------------------------CACACACC-CTC-CCGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33557826 23 + 192294377 ctcacacc----------------------------cacacacc-ctc-ccgc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4318840 23 - 9440265 ctcacacc----------------------------cacacacc-ctc-ccgc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16909404 23 - 21915920 ctcacacc----------------------------cacacacc-ctc-ccgc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 48862 21 - 21531802 CCCACACC------------------------------CACACC-CTC-CCAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 72967 23 - 2515279 ctcacacc----------------------------cacacacc-ctc-ccgc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 229571 23 + 6586416 ctcacacc----------------------------cacacacc-ctc-ccac i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146594438 52 - 204313951 cacacaccctcccactcacactcaggatcaccctcacacacaccaccc-ccac i calJac3.chr2 I 4 C 0 s cebCap1.NW_016107703v1 440751 23 - 2125214 cccacacc----------------------------cacacacc-ctc-ccac i cebCap1.NW_016107703v1 I 566 C 0 s canFam3.chr6 60988084 24 - 77573801 ctcacatt----------------------------catgccct-ctcttcac i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2175092 0 - 8137123 C e aotNan1.NW_018514293v1 53882 236 + 376347 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=28820.000000 s hg38.chr7_KI270899v1_alt 74407 8 + 190869 aggcacac s gorGor5.CYUI01015914v1 35558 8 - 432965 aggcacac i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941521 8 + 185818997 AAGCACAT i rheMac8.chr3 C 0 I 41 s macFas5.chr3 33557849 8 + 192294377 aagcacat i macFas5.chr3 C 0 I 41 s macNem1.NW_012019910v1 4318863 8 - 9440265 aagcacat i macNem1.NW_012019910v1 C 0 I 41 s cerAty1.NW_012002954v1 16909427 8 - 21915920 aagcacat i cerAty1.NW_012002954v1 C 0 I 41 s chlSab2.chr28 48883 3 - 21531802 AGG----- i chlSab2.chr28 C 0 I 36 s manLeu1.NW_012101810v1 72990 8 - 2515279 aagcacat i manLeu1.NW_012101810v1 C 0 I 41 s colAng1.NW_012117710v1 229594 8 + 6586416 gggcacac i colAng1.NW_012117710v1 C 0 I 723 s calJac3.chr2 146594490 8 - 204313951 aggcacac i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 440774 7 - 2125214 aggcacg- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2175092 8 - 8137123 AGGCACGT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60988108 8 - 77573801 aggcacac i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 53882 236 + 376347 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=73016.000000 s hg38.chr7_KI270899v1_alt 74415 18 + 190869 gcgcaccctcacactcat s gorGor5.CYUI01015914v1 35566 18 - 432965 gcgcaccctcacactcat i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941570 18 + 185818997 GTGCACACCCACACTCAT i rheMac8.chr3 I 41 C 0 s macFas5.chr3 33557898 18 + 192294377 gtgcacacccacactcat i macFas5.chr3 I 41 C 0 s macNem1.NW_012019910v1 4318912 18 - 9440265 gtgcacacccacactcat i macNem1.NW_012019910v1 I 41 C 0 s cerAty1.NW_012002954v1 16909476 18 - 21915920 gtgcacacccacactcat i cerAty1.NW_012002954v1 I 41 C 0 s chlSab2.chr28 48922 18 - 21531802 GTGCACACTCACACTCAT i chlSab2.chr28 I 36 C 0 s manLeu1.NW_012101810v1 73039 18 - 2515279 gggcacacccacactcat i manLeu1.NW_012101810v1 I 41 C 0 s calJac3.chr2 146594498 18 - 204313951 gcccacacccacacccat i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 440781 18 - 2125214 gtgcatactcacactcat i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2175100 18 - 8137123 GGCCAGCCCCACACTCTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60988116 18 - 77573801 acagtcactcacacgcaT i canFam3.chr6 C 0 I 85 e colAng1.NW_012117710v1 229602 723 + 6586416 I e aotNan1.NW_018514293v1 53882 236 + 376347 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=105820.000000 s hg38.chr7_KI270899v1_alt 74433 42 + 190869 ggtctcgccctcccacaggcacacctacactcacccacgcct s gorGor5.CYUI01015914v1 35584 42 - 432965 ggtctcgccctcacacaggcacacccacactcacacacgcct i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941588 42 + 185818997 GGTCACGCCCTCCCACAGGCACAACCACACCCACACACGCCC i rheMac8.chr3 C 0 I 28 s macFas5.chr3 33557916 42 + 192294377 ggtcacgccctcccacaggcacaaccacacccacacacgccc i macFas5.chr3 C 0 I 28 s macNem1.NW_012019910v1 4318930 42 - 9440265 ggtcacgccctcccacaggcacaaccacacccacacacgccc i macNem1.NW_012019910v1 C 0 I 28 s cerAty1.NW_012002954v1 16909494 42 - 21915920 ggtcacgccctcccacaggcacaaccacacccacacacgccc i cerAty1.NW_012002954v1 C 0 I 28 s chlSab2.chr28 48940 19 - 21531802 GGTCATGCCCTCCCACAGG----------------------- i chlSab2.chr28 C 0 I 23 s manLeu1.NW_012101810v1 73057 42 - 2515279 ggtcacaccctcccacaggcacaaccacatccacacacgccc i manLeu1.NW_012101810v1 C 0 I 28 s calJac3.chr2 146594516 35 - 204313951 a--cacaccctcccacaggcacatgcacacacccaca----- i calJac3.chr2 C 0 I 3 s cebCap1.NW_016107703v1 440799 42 - 2125214 ggtcacactctcccacaggcacagccacactcacacacaccc i cebCap1.NW_016107703v1 C 0 I 4 s otoGar3.GL873611 2175118 22 - 8137123 ACACCCACCCTCACACGTGCTC-------------------- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 229602 723 + 6586416 I e canFam3.chr6 60988134 85 - 77573801 I e aotNan1.NW_018514293v1 53882 236 + 376347 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=21996.000000 s hg38.chr7_KI270899v1_alt 74475 3 + 190869 aca s gorGor5.CYUI01015914v1 35626 3 - 432965 aca i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941658 3 + 185818997 ACA i rheMac8.chr3 I 28 C 0 s macFas5.chr3 33557986 3 + 192294377 aca i macFas5.chr3 I 28 C 0 s macNem1.NW_012019910v1 4319000 3 - 9440265 aca i macNem1.NW_012019910v1 I 28 C 0 s cerAty1.NW_012002954v1 16909564 3 - 21915920 aca i cerAty1.NW_012002954v1 I 28 C 0 s chlSab2.chr28 48982 3 - 21531802 ACA i chlSab2.chr28 I 23 C 0 s manLeu1.NW_012101810v1 73127 3 - 2515279 aca i manLeu1.NW_012101810v1 I 28 C 0 s colAng1.NW_012117710v1 230325 3 + 6586416 aca i colAng1.NW_012117710v1 I 723 C 0 s calJac3.chr2 146594554 3 - 204313951 aca i calJac3.chr2 I 3 I 490 s cebCap1.NW_016107703v1 440845 3 - 2125214 aca i cebCap1.NW_016107703v1 I 4 C 0 s aotNan1.NW_018514293v1 54118 3 + 376347 ACA i aotNan1.NW_018514293v1 I 236 C 0 s otoGar3.GL873611 2175140 3 - 8137123 ACA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60988134 85 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=2907643.000000 s hg38.chr7_KI270899v1_alt 74478 569 + 190869 ggcacacaagcacacactccTTTCCCC---C-CACAATCCCTGCACACCCGTGGGCACCTATGCTCTCGTGTGGTCTGGATCTGCCCTCTGTG------TGCACAGCCTGTGCCTGGCCCAGCGTGAGTGACTC--GTGGATGCT--CTGCAGGTGAGACCTGAGGT------------------GAGTGTCCTGGCACCGCCCGGGCCTGGCTATCGGGA-------AGCTCCGCCCAGACGGCCGCCTCCTCCCTGGCGCGGGCCTCTTCCCTAGGAGGAGCTCGTTAGCTTGTTTTTCCATCGGTATTCTTTGTCCCCAGTCACCCGGACCTGGGGCTGGGCACTG-CCAGGGGC-AAATGTGCCATGTGGAGAGGCCAA-GCGGGGGACAGGGGCGGCTTGTCCGCCAGGTGGCACCGAGGCGGCTGCGTGTGGGGCAGTGTTCCCACTCTCGTCACCAGCCCGCACTTCCCGCTGCCTCTGAGTATTCTGTGGGGGCTGCCCCGGCTGCAGCCCCAGGTGTAGCCTGCTG-GAAATCTCACGGTGTCCAGGCCCCATCCCTAACCGGCCCGGGGCATCCCTGATTTCGTGCTCACCGAGAGGGGCC--------T s gorGor5.CYUI01015914v1 35629 569 - 432965 ggcacacaagcacacACTCCTTTCCCC---C-CACAATCCCTGCACACTCATGGGCACCTATGCTCTCGTGTGGTCTGGATCTGCCCTCTGTG------TGCACAGCCTGTGCCTGGCCCAGTGTGAGTGACTC--GTGGATGCT--CTGCAGGTGAGACCTGAGGT------------------GAGTGTCCTGGCACCGCCCGGGCCTGGCTATCAGGA-------AGCTCTGCCCAGACAGCCGCCTCCTCCCTGATGCGGGCCTCTTCCCTAGGAGAAGCTCGTTAACTTGTTTTTCCATCAGTATTCTTTGTCCCCAGTCACCCAGACCTGGGGCTGGACACTG-CCAGGGGC-AAATGTGCCATGTGGAGAGGCCAA-GCGGGGGACAGGGGCAGCTTGTCCGCCAGGTGGCACCTAGGCAGCTGCGTGTGGGGCAGTGTTCCCACTCTCGTCACCAGCCCGCACTTCCCGCTGCCTCTGAGTATTCTATGGGGGCTGCCCCGGCTGCAGCCCCAGGTGTAGCCTGCTG-GAAATCTCACGGTGTCCAGGCCCCATCCCTAACCGGCCCAGGGCATCCCTGATTTCACGCTCACCGAGAGGGGCC--------T i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33941661 565 + 185818997 GGCACAAGAGCACACACTCCTTTCCCC---C-CACACTCCCTGCACACCCATGGGCACCTGTGCTCTCCTGTGGTCTGGATCTGCCCTCTGTG------CGCACAGCCTGCACCTGGCCCCGTGTGAGTGACTCATGTGGATGCT--CTGCAGGTGAGACCCAAGGT------------------GGGTATCCTGGCACTGCCC-GGCCTGGCTGTCAGGA-------AGCTCTG-CCAGACAGCCGCCTCCTCCCTGATGCAGGCTTCTTCCCAAGGATGAGCTCACTGATGTG-TTTTCCACCAGTATTCGGTGTCCCCAGTCACCCAGGCCTGGGGCTGGACAGTG-CCAGGGGC-AGATGTGCCATGTGGAGAGGCCAG-GCAGGG--CAGGGGCAGCTTGTCCGCCGGGTGGCACCTAGACAGCTGTGTGGGGCGCAGTGTTCCCACTCTCATCACCAGCCTTCACTTCCAACTGCCTCTGAGTATTCTGTGGCGGCTGCTCTGGCTGGGGCCTCAGGTGTAGCCTGCTG-AAAATCTCATGGTGTCCAGGCCCCATCCCCAACTGGCCCAGGGCAACCCTGATTTCCTACTCACCG-GAGGGGCC--------T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33557989 565 + 192294377 ggcacaagagcacacacTCCTTTCCCC---C-CACACTCCCTGCACACCCATGGGCACCTGTGCTCTCCTGTGGTCTGGATCTGCCCTCTGTG------CGCACAGCCTGCACCTGGCCCCGTGTGAGTGACTCATGTGGATGCT--CTGCAGGTGAGACCCAAGGT------------------GGGTATCCTGGCACTGCCC-GGCCTGGCTGTCAGGA-------AGCTCTG-CCAGACAGCCGCCTCCTCCCTGATGCAGGCTTCTTCCCAAGGATGAGCTCACTGATGTG-TTTTCCACCAGTATTCGGTGTCCCCAGTCACCCAGGCCTGGGGCTGGACAGTG-CCAGGGGC-AGATGTGCCATGTGGAGAGGCCAG-GCAGGG--CAGGGGCAGCTTGTCCGCCGGGTGGCACCTAGACAGCTGTGTGGGGCGCAGTGTTCCCACTCTCATCACCAGCCCTCACTTCCAACTGCCTCTGAGTATTCTGTGGCGGCTGCTCTGGCTGGGGCCTCAGGTGTAGCCTGCTG-AAAATCTCATGGTGTCCAGGCCCCATCCCCAACTGGCCCAGGGCAACCCTGATTTCCTACTCACCG-GAGGGGCC--------T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4319003 566 - 9440265 ggcacaAGAGCACACACTCCTTTCCCC---C-CACACTCCCTGCACACCCATGGGCACCTGTGCTCTCCTGTGGTCTGGATCTGCCCTCTGTG------CGCACAGCCTGCACCTGGCCCCGTGTGAGTGACTCATGTGGATGCT--CTGCAGGTGAGACCCAAGGT------------------GGGTGTCCTGGCACTGCCC-GGCCTGGCTGTCAGGA-------AGCTCTG-CCAGACAGCCGCCTCCTCCCTGATGCAGGCTTCTTCCCAAGGATGAGCTCACTGATGTG-TTTTCCACCAGTATTCGGTGTCCCCAGTCACCCAGGCCTGGGGCTGGACAGTG-CCAGGGGC-AGATGTGCCATGTGGAGAGGCCAG-GCAGGG--CAGGGGCAGCTTGTCCGCCGGGTGGCACCTAGACAGCTGTGTGGGGCGCAGTGTTCCCACTCTCATCACCAGCCCTCACTTCCAACTGCCTCTGAGTATTCTGTGGCGGCTGCTCTGGCTGGGGCCTCAGGTGTAGCCTGCTGAAAAATCTCATGGTGTCCAAGCCCCATCCCCAACTGGCCCAGGGCAACCCTGATTTCCTACTCACCG-GAGGGGCC--------T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16909567 565 - 21915920 ggcacaAGAGCACACACTCCTTTCCCC---C-CACACTCCCTGCACACCCATGGGCACCTGTGCTCTCCTGTGGTCTGGATCTGCCCTCTGTG------CGCACAGCCTGCGCCTGGCCCCGTGTGAGTGACTCATGTGGATGCT--CTGCAGGTGAGACCCAAGGT------------------GGGTGTCCTGGCACTGCCC-GGCCTGGCTGTCAGGA-------AGCTCTG-CCAGACAGCCGCCTCCTCCCTGATGCAGGCTTCTTCCCAAGGATGAGCTCACTGATGTG-TTTTCCACCAGTATTCAGTGTCCCCAGTCACCCAGGCCTGGGGCTGGACAGTG-CCAGGGGC-AGATGTGCCATGTGGAGAGGCCAC-GCAGGG--CAGGGGCAGCTTGTCCGCCGGGTGGCACCTAGACAGCTGTGTGGGGCGCAGTGTTCCCACTCTCGTCACCAGCCCTCACTTCCAACTGCCTCTGAGTATTCTGTGGCGGCTGCTCTGGCTGGGGCCTCAGGTGTAGCCTGCTG-AAAATCTCATGGTGTCCAGGCCCCATCCCCAACTGGCCCAGGGCAATCCTGATTTCTTACTCACCG-GAGGGGCC--------T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 48985 564 - 21531802 GGCACACGAGCACACACTCCTTTCCCC---C-CACACTCCCTGTACACCCATGGGCACCTGTGCTCTCATGTGGTCTGGATCTGCCCTCTGCG------CACACAGCCTGCGCCTGGCCCCGTGTGAGTGACTCATGTGAACACT--CTGCAGGTTACACCCAAGGT------------------GGGTGTCCTGGCACTGCCC-AGCCTGGCTGTCAGGA-------AGCTCTG-CCAGACAGCCGCCCCCTCC--GATGCAGGCCTCTTCCCAAGGATGAGCTCACTGAGGTG-TTTTCCACCAGCATTCTGTGTCCCCAGTCACCCAGGCCTGGGGCtggacagtg-ccaggggc-agatgtgccatgtggagaggccag-gcaggg--caggggcagtTTGTCCACCGGGTGGCACCTAGACAGCTGTGTGGGGTGCAGTGTTCCCACTCTCATCACCAGCCCTCACTTCCAACTGCCTCTGAGTATTCTGTGGGGGCTGCTCTGGCTGGGGCCTCAGGTGTAGCTTGCTG-AAAATCTCATGGTGTCCAGGCCCCATCCCCAACTGGCCCAGGGCAACCCTGATTTCACGCTCACCGAGAGGGGCC--------T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 73130 565 - 2515279 ggcacaAGAGCACACACTCCTTTCCCC---C-CACACTCCCTGCACACCCATGGGCACCTGTGCTCTCCTGTGGTCTGGATCTGCCCTCTGTG------CGCACAGCCTGCGCCTGGCCCCGTGTGAGTGACTCGTGTGGATGCT--CTGCAGGTGAGACCCGAGGT------------------GGGTGTCCTGGCACTGCCC-AGCCTGGCTGTCAGGA-------AGCTCTG-CCAGACAGCCGCCTCCTCCCTGATGCAGGCTTCTTCCCAAGGATGAGCTCACTGATGTG-TTTTCCACCAGTATTCGGTGTCCCCAGTCACCCAGGCCTGGGGCTGGACAGTG-CCAGGGGC-AGATGTGCCATGTGGAGAGGCCAG-GCAGGG--CAGGGGCAGCTTGTCCGCCAGGTGGCACCTAGACAGCTGTGTGGAGCGCAGTGTTCCCACTCTCGTCACCAGCCCTCACTTCCAACTGCCTCTGAGTATTCTGTGGCGGCTGCTCTGGCTGGGGCCTCAGGTGTAGCCTGCTG-AAAATCTCATGGTGTCCAGGCCCCATCCCCAGCTGGCCCAGGGCAACCCTGATTTCATACTCACCG-GAGGGGCC--------T i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 230328 516 + 6586416 ggcacaTGAGCACACACTCCTTTCCCC---C-CACACTCCCTGCACACCCATGGGCACCTGTGCTCGCGTGTGGTCTGGATCTGCCCTCGGTG------CGCACAGCCTGCGCCTGGCCCTGTGCGAGTGACTTGTGTGGACGCT--CTGCAGGTGAGACCCGAGGT------------------GGGTGTCCTGGCACTGCCC-GGCCTGGCTGTCAGGA-------AGCTCTG-CCAGACAGCCGCCTCCTCCCTGATGCAGGCCTCT----------------------------------------------TCCCTAGTCACCCAGGCCTGGAGCTGGACAGTG-CCA-GGGC-AGCTGTGCCATGTGGAGAGGCCAG-GCAGGG--CAGGGGCAGCTTGTCGGCCGGGTGGCACCTAGACAGCTGTGTGG---GCAGTGTTCCCACTCTCGTCACCAGCCCTCACTTCCAACGGCCTCTGAGTATTCTGTGGGGGCTGCCCTGGCTGGGGCCTCAGGTGTTGCCTGCTG-AACATCTCATGGTGTCCAGGCCCCATCCCCAACGGGCTCAGGGCGTCCCTGATTTCACGCTCACCG-GAGGGGCC--------T i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146595047 560 - 204313951 GGCACATGAGCACACATTCCTTTCCCC---CACACACTCCCTGCACACCCATGGGCACCTGTGCCATCGTGTGATCTGGATCTGCCCTCTGTG------CACACACCCTGTGCCTGGCCCAGTGTGAGTGACTCGTGTAGATGTT--CTGCAGGTGAGACCTGAGGT------------------GGGTGTTCTGGCACTGCCTGGGCCTGGCTACCAGGA-------AGCTCTGCCCTGACAGCCACCTCCTCCCCGTTGCCGGCCTCTTCCCTTGGAGGAGCTCATTAACGTTTTTCTCCACCAGTATACTGTGTCCCCAGTCACCCAGGCCTGGGGCTGGACACTG-CCAGGGGC-AAATGTGCCATATGGCGAAGCCAA-GTGGAGG-CAGAGGCAGCTTGTCCGCTGGGTAGCACCTACGCAGCTGCATGTGGGGCAGTGTTCCCACTCTCCTCACCAGCCTGCACTTCCTGCTGC--CTGAGTATTCTATGGGGGCTGCTCTGGCTGCAGCCCTGG-------CTGCTG-GAAACCTCATGGTGTCCA-GCCCCAT-CCTGGCTGGCCCAGGGCATCCCTGATTTCCTGCTTACTGAGAGGGGCC--------T i calJac3.chr2 I 490 C 0 s cebCap1.NW_016107703v1 440848 562 - 2125214 ggcacatgagcacacactccttcccccccacacacacTCCCTGCATACTCACAGGCACCTGTGCCTTCGTGTGATCTGGATCTGCCCTCTGTG------TGCACACCCTGTGCCTGGCCCAGCGTGAGTGACTCGTG--GATGCT--CTGCAGGTGAGACCTGAGGT------------------GGGTGTCCTGGCACTGCCTGGGCCTGGCTACCAGGA-------AGCTCTGCCCAGGCAGCTGCCTCCTCCCTGTTGCAGGCCTCTTCCCTAGGAGAAGCTCATTAATGTGTTTCTCTACCAGTATACTGTGTCCCCAGTCACCCAGGCCT-GGGCTGGACACTG-CCAGGGGC-AAATGTGCCATACGGCAAGGCCAAGGTGGGGG-CAGAGGCAGCTCGTCCGCCGGGTAGCACCTACGCAGCTGCATGTGGGGAAGTGTTCCCACTCTCCCCACAAGCCCGCACTTCCTCCTGC--TTGAGTATTCTATGGGGGCTGCTCTGGCTGCGGCCCTGG-------CTGCTG-GAAACCTCATGGTGTCCA-GCCCCATCCCTGGCTGGCCCAGGGCATCTCTGATTTCCGGCTCACTGAGAGGGACC--------T i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 54121 560 + 376347 GGCACATGAGCACACACTCCTTCCCCC---C-CACACTCCCTGCACACCCACGGGCACCTGTGCTGTCATGTGATCTGGATCTGCCCTCTGTG------CGCACACCCTGTGCCTGGCCCAGTGTGAGTGACTCGTGTGGCTTCT--CTGCAGGTGACACCTGAGGT------------------GGGCGTCCTGTCACTGCCTGGGTCTGGCTACCAGGA-------AGCTCTGCCCAGACGGCTGCCTCCTCCCTGTTGCGGGCCTCTTCCCTGGGAGGAGCCCATTCACGTGTTTCTCCACCAGTATACTGTGTCCCCAGTCACCCAGGCCTGGGGCTGGACGCTG-CCAGGGGC-AAATGTGCCGTACGGCGAGGCCAA-GAGGGGG-CAGAGGCAGCTCGTCCACTAAGTAGCACCCACGCAGCTGCACGTGGGGCAGCGTTCCCACTCTCCTCACCAGCCCGCACTTCCCGCCGC--CCGAGTATTCGATGGGGGCTGCTCTGGCTGCGGCCCCAG-------CTGCTG-GAAACCTCGTGGTGTCCA-GCCCCATCCCCGGCTGGCCCAGGGCATCCCTGATTTCCTGCTCACTGAGAGGGGCC--------T i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2175143 502 - 8137123 ----------------------------------------------------------------------CGGAACTGGGTCTATCCCCTGTGGGCCCTGGCACAGCCTGTG-CTGGCCTC-----ACTGGCTCACGTGGATTCTTGCTGTGGGGGCGGGCTGAGGTAGGCAACCGGGCCACCTGGGGTGTCCTGGCACAGCCA-GGCCTGGCTTCCAGGAAGGCCACAGCTCTGCCCAGAGAGATGCCTCCTCCCCGGTGT-GGCCTCTTTCCCAGCAAGAGCTCGTTAACTTGTTTTTCCA-CAGTATTCTTTGTCCCT-GTCA-CCGGTCCTGGGGCTGGACACTGCCCAGGGGCAAAATATGCCAGGAAGAAGAGGCAG-AGGGAGGGCAGTGGCAGCACAGTCACCAGGCGGTGCCT----------GTGTGGGCCAGAGTTCCTGCTCTTGTCACCAGCTGTCACTTCCTGTCACCTTGGAGTGTCCTGTG--AGCTGCTTTGGGTACAGCC-CATGTTCAGCCTGCTT-GGAA----------------------CCCTGGCCGGGCCAGGGCATCCTCAATTTCAGGTTCACTGGGAGAGGCTGTACAGGGT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60988134 85 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1281172.000000 s hg38.chr7_KI270899v1_alt 75047 244 + 190869 CCCT-CGGCCTGCCCAGCTAAGAGCCTTGCAGGAGCCCTTCTCCAGCCTCACACTGCCAGCCC-CTTTGAATTGCAGC-ACTCAGGTCCCC-AGGAAAGGTG-TTTTTA-----TCCAGTTAGCTGTTTTTTATACTTATGAAAAAGCTCCGTCGCTTGGAGCAAAGCAGAGTTGATTTTCAGATGTGATTTCTGCAGGCAGAGCAATGTCTGGTTCCT-----------GCTG--TT-----TCTTCTGAT--GGGCGCGGCGGTG------ACT-GAG-G s gorGor5.CYUI01015914v1 36198 244 - 432965 CCCT-CGGCCTGCCCAGCTAAGAGCCTTGCAGGAGCCCTTCTCCAGCCTCACACTGCCAGCCC-CTTTGAATTGCAGC-ACTCAGGTCCCC-AGGAAAGGTG-TTTTTA-----TCCAGTTAGCTGTTTTTTATACTTATGAAAAAGCTCCGTCACTTGGAGCAAAGCAGAGTTGATTTTCAGCTGTGATTTCTGCAGGCAGAGCAATGTCTGGTTCCT-----------GCTG--TT-----TTTTCTGAT--GGGCGCGGCGGTG------ACT-GAG-G i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33942226 247 + 185818997 CCCCGCCGCCTGCCCAGCCAAGAGCCTTGTAGGAGCCCCTCTCCAGCCTCACACTACCAGCCC-CTTCAAATTGCAGC-GCTCAGGTCCTT-AGGAAAGGTGTTTTTTA-----TCAAGTTAGCTACTTTTTATACTTATGAAGAAGTTCCATGACATGGAGCAAAGGAGAGTTGATTTTCAGCTGTGATTTCTGCCTGCAGAGCAATGTCTAGTTCCT-----------GCTG-TTT-----TTTTCTGAT--GGGCGCTGCAGTG------ACT-GGG-G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33558554 247 + 192294377 CCCCGCCGCCTGCCCAGCCAAGAGCCTTGTAGGAGCCCCTCTCCAGCCTCACACTACCAGCCC-CTTCAAATTGCAGC-GCTCAGGTCCTT-AGGAAAGGTGTTTTTTA-----TCAAGTTAGCTACTTTTTATACTTATGAAGAAGTTCCATGACATGGAGCAAAGGAGAGTTGATTTTCAGCTGTGATTTCTGCCTGCAGAGCAATGTCTAGTTCCT-----------GCTG-TTT-----TTTTCTGAT--GGGCGCTGCAGTG------ACT-GGG-G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4319569 247 - 9440265 CCCCGCCACCTGCCCAGCCAAGAGCCTTGTAGGAGCCCCTCTCCAGCCTCACACTACCAGCCC-CTTCAAATTGCAGC-GCTCAGGTCCTT-AGGAAAGGTGTTTTTTA-----TCAAGTTAGCTACTTTTTATACTTATGAAGAAGTTCCATGACATGGAGCAAAGGAGAGTTGATTTTCAGCTGTGATTTCTGCCTGCAGAGCAATGTCTAGTTCCT-----------GCTG-TTT-----TTTTCTGAT--GGGCGCTGCAGTG------ACT-GGG-G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16910132 247 - 21915920 CCCCGCCGCCTGCCCAGCCAAGAGCCTTGTAGGAGCCCCTCTCCAGCCTCACACTACCAGCCC-CTTCAAATTGCAGC-ACTCAGGTCCCT-AGGAAAGGTGTTTTTTA-----TCAAGTTAACTACTTTTTATACTTATGAAGAAGTTCCATGACATGGAGCAAAGGAGAGTTGATTTTCAGCTGTGATTTCTGCCTGCAGAGCAATGTCTAGTTCCT-----------GCTG-TTT-----TTTTCTGAT--GGGCGCTGCAGTG------ACT-GGG-G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 49549 247 - 21531802 CTCCGATGCCTGCCCAGCCAAGAGCCTTGCAGGAGCCCCTCTCCAGCCTCACACTACCAGCCC-CTTCAAATTGCAGC-ACTCAGGTCCTC-AGGAAAGGTG-TTTTTA-----TCAAGTTAACTATTTTTTATACTTATGAAGAAGTTCCACGATGTGGAACAAAGTAGAGTTGATTTTCAGCTGTGATTTCTGCCTGCAGAGCAATGTCTAGTTCCT-----------GCTG-TTT-----TTTTCTGAT--GGGCGCTGCAGTG------ACTAGGG-G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 73695 248 - 2515279 CCCCGCCGCCTGCCCAGCCAAGAGCCTTGTAGGAGCCCCTCTCCAGCCTCACACTACCAGCCC-CTTCAAATTGCAGC-GCTCAGGTCCTT-AGGAAAGGTGTTTTTTA-----TCAAGTTAACTACTTTTTATACTTATGAAGAAGTTCCATGACATGGAGCAAAGGCGAGTTGATTTTCAGCTGTGATTTCTGCCTGCAGAGCAATGTCTAGTTCCT-----------GCTGTTTT-----TTTTCTGAT--GGGCGCTGCAGTG------ACT-GGG-G i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 230844 245 + 6586416 CCCCGCTGCCTGCCCAGCCAACAGCCTTGCAGGAGCCCCTCTCCAGCCTCACACTACCAGCCC-CTTCAAATTGCACC-ACTCAGGGCCCC-AGGAAAGGTG-TTTTTA-----TCAAGTTAGCTACTTTTTATACTTACGAAGAAGTTCCATCACATGGAGCACAGTAGAGTTGATTTTCAGCTGTGATTTCTGCCTGCAGAGCAATGTCTAGTTCCT-----------GCTG--GT-----TTTTCTGAC--GGGCGCTGCAGTG------ACT-GGG-G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146595607 242 - 204313951 CCCCGAGATCTGCCCAGCTGAGAGCCTTGCAGGGGCCC-TCATCAGCCTCACACTACCAGCCC-CCTCAGATTGCAGC-ACTCAGGTCCCC-AGGAAAGGTG-TTTTTA-----TCAAGTTAGCTATTGTTTATACTTATGAAAACGTTCCATCACAAGCAGCA-ATTAGACTTGATTTTCAGCTGTGATTTCTGCCTGCAGAACAATGTCTAGTTCCT-----------GCTG--TT-----TTTTCTGAG--GGACACCGTGGTG------ACT-GTG-- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 441410 242 - 2125214 CCCCAAGATCTGCCCAGCTCAGGGCCTTGCAGAGGCCC-TCACCAGCCTCACACTACCAGCAC-CCTCAGATTGCAGC-ACTCAGGTCCCC-AGGAAAGGTG-TTTTTA-----TCAAGTTAGCTATTGTTTATACTTATGAAAACGTTCCATCACACGCAGCA-ATTAGAGTTGATTTTCAGCTGTGATTTCTGCCTGCAAAACAATGTCTAGTTCCT-----------GCTG--TT-----TTTTCTGAT--GGGCACTGCATCA------ACT-GTG-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 54681 243 + 376347 CCCTGGGACCTGCGCAGCTGAGAGCCTTGCAGGGGCCC-TCACCAGCCTCACACTACCCGCCC-CCTCAGATTGCAGC-ACTCAGGTCCCC-AGGAAAGGTG-TTTTTA-----TCAAGTTAGCTAGTGTTTATACTTATGAAAACGTTCCATCACACGCAGCA-ATTAGAGTTGATTTTCAGCTGTGATTTCTGCCTGCAGAACAATTTCTGGTTCCT-----------GCTG--CT-----TTTTCTGAT--GGGCACCACGGTG------GCT-GTGG- i aotNan1.NW_018514293v1 C 0 I 88 s otoGar3.GL873611 2175645 216 - 8137123 GCCC-CCACTGGGCCAGCTCGGAGCCCTGCAGGGTCCC-----------AACACTACCAACA--CTTCAAATTACAGCTGCTGAGATCCCCGAGGAAGGGCA-TTTTTA-----CTGAGCTA------------------------GTTCTATGACATGGAGGAAATTAGAACTGACTTTCAGCTGTGA----------AAGAGAGCCGTCTAGTTCCTTAGCAAC---AGCTG-CCTCTGCGTCTCCTGACAGGGGCACTGCTGGT------CCC-TCG-G i otoGar3.GL873611 C 0 I 10 s canFam3.chr6 60988219 260 - 77573801 CCCCGAGCCTGGTCCGTCCGAGGCCCTCAGAGGTGCCC----------TGCCTCTTGCAGCCCATTTCAAATTATAGCTGCTGCGATCCCC-AAGAAGCCAGGATTTTAAAAAGCGGAGCTGCCTATTTTTCACGATTATGTAACACTTCCGTAGCACAGAGCAAATCGGAGCCGGTGTTCAGCGGCGTCTTCTCCCTGCGGAAAGATGCCCCGTCCCCCAGCACCTGTCACTG--TT-----TCTTCTGAC--GGGGATCATGCTGGATGGCACT-GGA-G i canFam3.chr6 I 85 I 5 e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=176728.000000 s hg38.chr7_KI270899v1_alt 75291 45 + 190869 GTGTCCTGCGAGCC--G-TCGGTGAGCGCTCAGCTGTCCTGGTCTGCA s gorGor5.CYUI01015914v1 36442 45 - 432965 GTGTCCTGCGAGCC--G-TCGGTGAGCGCTCAGCTGTCCTGGTCTGCA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33942473 43 + 185818997 --GTCCCGTGTGCC--G-TCGGTGGGGGCTTAGCTGGCCTGGTCTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33558801 43 + 192294377 --GTCCCGTGTGCC--G-TCGGTGGGGGCTTAGCTGGCCTGGTCTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4319816 43 - 9440265 --GTCCCGTGTGCC--G-TCGGTGGGGGCTTAGCTGGCCTGGTCTGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16910379 43 - 21915920 --GTCCCGCGTGCC--G-TCGGTGGGGGCTTAGCTGGCCTGGTCTGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 49796 43 - 21531802 --GTCCCGCGTGCC--G-TTGGTGGGGGCTTAGCTGGCCTGGTCTGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 73943 43 - 2515279 --GTCCCGCGTGCC--G-TCGGTGGGGGCTTAGCTGGCCTGGTCTGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 231089 43 + 6586416 --GTCCCGCGTGCC--G-TCTGTGGGGGCTTAGCTGGCCTGGTCTGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146595849 47 - 204313951 GTGTCCTGCATGCTTAG-TTGGTGAGTGATTAGCTGTCCTGGACGGCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 441652 47 - 2125214 GTGTCCTGCTTGCTTAA-TTGGTGAGTGCTTAGCTGTCCTGGACAGCA i cebCap1.NW_016107703v1 C 0 I 18 s otoGar3.GL873611 2175871 46 - 8137123 CCATCCTCTAGGTG--GATCAGGGGCCAGTTAGCTGTCCTAGATTGCA i otoGar3.GL873611 I 10 C 0 s canFam3.chr6 60988484 45 - 77573801 CTGCCCAGCACGGC--T-GCAGGCTGTCCCCAGACGGCCAGGCGAGCA i canFam3.chr6 I 5 C 0 e aotNan1.NW_018514293v1 54924 88 + 376347 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=68803.000000 s hg38.chr7_KI270899v1_alt 75336 18 + 190869 ---------AGTTCCT----------ACTGACATCAC s gorGor5.CYUI01015914v1 36487 18 - 432965 ---------AGTTCCT----------ACTGACATCAC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33942516 18 + 185818997 ---------AGTTCCT----------ACTGACATCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33558844 18 + 192294377 ---------AGTTCCT----------ACTGACATCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4319859 18 - 9440265 ---------AGTTCCT----------ACTGACATCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16910422 18 - 21915920 ---------AGTTCCT----------ACTGACATCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 49839 18 - 21531802 ---------AGTTCCT----------ACTGATATCAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 73986 18 - 2515279 ---------AGTTCCT----------ACTGACATCAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 231132 18 + 6586416 ---------AGTTCCT----------ACTGACGTCAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146595896 17 - 204313951 ----------TCCCCT----------CTTGACCTCGT i calJac3.chr2 C 0 C 0 s otoGar3.GL873611 2175917 18 - 8137123 ---------AGTTCCC----------ACTGGCATCAT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60988529 37 - 77573801 CGTGCAGGCTGCTCCCGGCGCCGCCAGCTGACATCAG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 54924 88 + 376347 I e cebCap1.NW_016107703v1 441699 18 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=119632.000000 s hg38.chr7_KI270899v1_alt 75354 25 + 190869 AACCTGCTGCTTCTCTCTGTCCTTA s gorGor5.CYUI01015914v1 36505 25 - 432965 GACCTGCTGCTTCTCTCTGTCCTTA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33942534 25 + 185818997 AACCTGCTCCTTCTCTCTGTCCTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33558862 25 + 192294377 AACCTGCTCCTTCTCTCTGTCCTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4319877 25 - 9440265 AACCTGCTCCTTCTCTCTGTCCTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16910440 25 - 21915920 AACCTGCTCCTTCTCTCTGTCCTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 49857 25 - 21531802 AACCTGCTCCTTCTCTCTGTCCTTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 74004 25 - 2515279 AACCTGCTCCTTCTCTCTGTCCTTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 231150 25 + 6586416 AACCTGCTCCTTCTCTCTGTCCTTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146595913 25 - 204313951 GACCTGCTGCTTCTCTCTCTCTCCT i calJac3.chr2 C 0 I 2 s cebCap1.NW_016107703v1 441717 25 - 2125214 AACCTGCTGCTTCTCTCTCTCTCCT i cebCap1.NW_016107703v1 I 18 I 2 s otoGar3.GL873611 2175935 25 - 8137123 GACCTGCCACTTCTCCCCTTCCCTA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60988566 14 - 77573801 GATCCG----TTCTCCCT------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 54924 88 + 376347 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=742600.000000 s hg38.chr7_KI270899v1_alt 75379 134 + 190869 AGGGTCAGAAGATGGAGAAAAGGTTCATGTTTCCACCCCTGTATTCTGTTAGGTTC-GGGTTTTTGAGAGAGGC----TTGTGGGGAAGGGGCCGTGTCCCCACTCCTTCCTTTCTTCTTGTACACATATTTACATCCA---- s gorGor5.CYUI01015914v1 36530 134 - 432965 AGGGTCAGAAGATGGAGAAAAGGTTCATGTTTCCACCCCTGTATTCTGTTAGGTTC-GGGTTTTTGAGAGAGGC----TTGTGGGGAAGGTGCCGTGTCCCCACTCCTTCCTTTCTTCTTGTACACATATTTACATCCA---- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33942559 133 + 185818997 AGGGTCAGAAGATGGGGAAA-GGTTCATGTTTCCACTTCTGTATTCTGTTACGTTC-AGGCTTTTGGGGGAGGC----TTGTGGGGAAGGGGCTGTGTCCCCACTCCTTCCTTTCTTCTTATGTATATATTTACATCCA---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33558887 133 + 192294377 AGGGTCAGAAGATGGGGAAA-GGTTCATGTTTCCACTTCTGTATTCTGTTACGTTC-AGGCTTTTGGGGGAGGC----TCGTGGGGAAGGGGCTGTGTCCCCACTCCTTCCTTTCTTCTTATGTATATATTTACATCCA---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4319902 133 - 9440265 AGGGTCAGAAGATGGGGAAA-GGTTCATGTTTCCACTTCTGTATTCTGTTACGTTC-AGGCTTTTGGGGGAGGC----TTGTGGGGAAGGGGCTGTGTCCCCACTCCTTCCTTTCTTCTTATGTATATATTTACATCCA---- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16910465 133 - 21915920 AGGGTCAGAAGATGGGGAAA-GGTTCATGTTTCCACCTCTGTATTCTGTTACGTTC-AGGCTTTTGGGGGAGGC----TTGTGGGGAAGGGGCTGTGTCCCCACTCCTTCCTTTCTTCTTATGTATATATTTACATCCA---- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 49882 134 - 21531802 AGGGTCAGAAGATGGAGAAACGGTTCATGTTTCCACCCCTGTATTCTGTTAGGTTC-AGGCTTTTGGGGGAGGC----TTGTGGGAAAGGGGCTGTGTCCCCACTCCTTCCTTTCTTCTTATGCATATATTTACATCCA---- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 74029 133 - 2515279 AGGGTCAGAAGATGGGGAAA-GGTTCATGTTTCCACCTCTGTATTCTGTTACGTTC-AGGCTTTTGGGGGAGGC----TTGTGGGGAAGGGGCTGTGTCCCCACTCCTTCCTTTCTTCTTATGTATATATTTACATCCA---- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 231175 133 + 6586416 AGTGTCAGAAGATGGAGAAA-GGTTCACGTTTCCACCCCTGTATTCTGTTAGGTTG-AGGTTTTTGGGGGAGGC----TTGTGGGGAAGGGGCTGTGTCCCCACTCCTTCCTTTCTTCTTATGCATATATTTACATCCA---- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146595940 132 - 204313951 AGGGTCAGAAGATGGAGAAA-GGTTCAT-TTTCCACACCTGTATTCTGTGAGGTTC-AGGTTTTTGGGAGAGGC----TTGTGGGGAAGGGGCTGTGCCCCCTCTCCTTCCTTTCTTTATATATGTATGTTTACATCTA---- i calJac3.chr2 I 2 C 0 s cebCap1.NW_016107703v1 441744 132 - 2125214 AGAGTCAGAAGATGGAGAAA-GGTTAAT-TTTCCACACCTGTATTCTGTGAGGTTC-GGGTTTTTGGGGGAAGC----TTGTGGGGAAGGGGCTGTGCCCCCTCTTCTTCCTTTCTTCTTACACGTATGTTTACAACCA---- i cebCap1.NW_016107703v1 I 2 C 0 s aotNan1.NW_018514293v1 55012 112 + 376347 AGGGTCGGAAGATGGAGAAA-GGTTCAT-TTTCCACACC---------------------TTCCTGGGGAAGGC----TGGTGGGGAAGGAGCCACGCCCCCTCTCCTTCCTTTCTTCTTATACGTATGTTTACATCCA---- i aotNan1.NW_018514293v1 I 88 C 0 s otoGar3.GL873611 2175960 131 - 8137123 AGGCTCAGAAAATGGAGAAA-GGTTAAT-TTTCCAACTCTGTATTCGGTTGGGTTTGGGGCTTATGGGGGAAGAAAAGTGGTGGGGTAGAAA--GTGTCTCTG----TTCCTTCCTTCTTACATGGATATTTATGttca---- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60988580 114 - 77573801 -GAGTCAGAAAGCGGGGGAAAGGCTCA--GTTCCATACCTGTCATCTGTTGGGCTC-AG---TTTTGGGGAGAA----TTGT-----------------CTCCCTCCCTCCCTTCACC-TACATGTACACTTACACTCAGCCA i canFam3.chr6 C 0 I 1252 e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=-2577.000000 s hg38.chr7_KI270899v1_alt 75513 2 + 190869 CT s gorGor5.CYUI01015914v1 36664 2 - 432965 CT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33942692 2 + 185818997 CT i rheMac8.chr3 C 0 I 9 s macFas5.chr3 33559020 2 + 192294377 CT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4320035 2 - 9440265 CT i macNem1.NW_012019910v1 C 0 I 9 s cerAty1.NW_012002954v1 16910598 2 - 21915920 CT i cerAty1.NW_012002954v1 C 0 I 9 s chlSab2.chr28 50016 2 - 21531802 CT i chlSab2.chr28 C 0 I 9 s manLeu1.NW_012101810v1 74162 2 - 2515279 CT i manLeu1.NW_012101810v1 C 0 I 9 s colAng1.NW_012117710v1 231308 2 + 6586416 CT i colAng1.NW_012117710v1 C 0 I 9 s calJac3.chr2 146596072 1 - 204313951 C- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 441876 1 - 2125214 C- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55124 1 + 376347 C- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2176091 2 - 8137123 tt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60988694 1252 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=2334.000000 s hg38.chr7_KI270899v1_alt 75515 21 + 190869 GATTGAGTGATTTACAATCAC s gorGor5.CYUI01015914v1 36666 10 - 432965 G-----------TGTCATCAC i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33559022 7 + 192294377 --------------CCGTCAC i macFas5.chr3 C 0 I 2 s calJac3.chr2 146596073 11 - 204313951 ----------TCCATCATCAC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 441877 11 - 2125214 ----------TCCATCATCAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55125 11 + 376347 ----------TCTGTCATCAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2176093 7 - 8137123 --------------cagtcac i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 231310 9 + 6586416 I e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 50018 9 - 21531802 I e manLeu1.NW_012101810v1 74164 9 - 2515279 I e cerAty1.NW_012002954v1 16910600 9 - 21915920 I e macNem1.NW_012019910v1 4320037 9 - 9440265 I e rheMac8.chr3 33942694 9 + 185818997 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=3134632.000000 s hg38.chr7_KI270899v1_alt 75536 602 + 190869 TCAACATGATTGACGGAACTTCTGGCAC-TGCGGAA--GCTGTGCTAAGGCCTGGGCATTCATGG--GACATGGAGCGTGCAAGAGCTGAAGTTTTAATGACTTGCTTGCAGAAAAAGATCAAGTTTTACAACAGAAAATTATGGGGCATAATTTCTATTGTGG-----------------CAAGGGACCAGG--GCCGTCTCCTGGA-----GGAAATCTGGA------------------------------GAGAACATGC------------------------------------------------------------------------------------------CACAG-----------CCAGGCCGGCGTA-GAGAGAGGCTCTGGCAGG--GGCCCCTCCCAACCCACCCCTGCATGCGTGGGGCTTCTGCTCAGCAACAGGGGCGCAGCTCCACTTTCAAAGTGTGAGGGGCAGGGGCTCAGGTCTCGGATGCCTTC--------------------------------ACCACCTGCCTGAGTCGGGCATCGGGCAGGGAGCGTGCGGGGGCCTCTGCCTCTGCTGGCCCAGATGATTCCCTGGCCCTCCTCAAGTGCAGCTCCCATTAAATAGATAGAGCCGGGCTCTGAGCCACGAATTGGGCCAAGCATCCCAAGGGGGTGGAACCGAGTCAGGAGTCAAGACCAGAGGCCAGGAACTGCCCACGCCCATGTT-CCTTCCACAGG--------GCCAGCCTGTCCGGTGGCAACACTAATACCATCCC s gorGor5.CYUI01015914v1 36676 601 - 432965 TCAACATGATTGACGGAACTTCTGGCAC-TGCGGAA--GCTGTGCTAAGGCCTGGGCATTCATGG--GACATGGAGCGTGCAA-AGCTGAAGTTTTAATGACTTGCTTGCAGGAAAAGATGAAGTTTTACAACAGAGAATTATGTGGCATAATTTCTATTGTGG-----------------CAAGGGACCAGG--GCCGTCTCCTGGA-----GGAAATCTGGA------------------------------GAGAACATGC------------------------------------------------------------------------------------------CACAG-----------CCAGGCCAGCGTA-GAGAGAGGCTCTGGCAGG--GGCCCCTCCCAACCCACCCCTGCATGCCTGGGGCTTCTGCTCAGCAACAGGGGCGCAGCTCCACTTTCAAAGTGTGAGGGGCAGGGGCTCAGGTGTTGGATGCCTTC--------------------------------ACCACCTGCCTGAGTCGGGCATCGGGCAGGGAGCGTGCCGGGGCCTCTGCCTCTGCTGGCCCAGATGATTCCCTGGCCCTCCTCAAGTGCAGCTCCCATTAAATAGATAGAGCCGAGCTCTGAGCCACGAATTGGGCCAAGCATCCCAAGGGGGTGGAACCGAGTCAGGAGTCAAGACCAGAGGCCAGGAACTGCCCACGCCCATGTT-CCTTCCACAGG--------GCCAGCCTGTCCGGTGGCAACACTAATACCATCCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33942703 628 + 185818997 TCAACATGATTCACGGAAC-TCTGTCAC-CACAGAA--GCTGTGCTAAGGCCTGGGCATTCGTGT--GACATGGAGCCTGCAAGATCTGAAGTCTTAATGAGCTGCTTGCAGGAAAAGATCAAGTTTCACAATCGAGAATTATGGGGCATGATTTCTGCTGTGG-----------------CAAGGGGCCAGG--GCCGTCTCCTGGA-----GGAAATCTGGA------------------------------GAGAACATGC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCAGCGTA-CGCAGAGGCGCTGGCAGG--GGCCCCTCCCAACCTGCCCCTGCATGTGCGGGGCTTC-GCTCAGGAACAGGGGCACAGCTCCACTTCCAAAATGCGAGGGGTAGGGGCCCCAGTGTTGGACGCCTTCCGAGCCCTGGAGCCTTGGGAGGGGCTCACAAGCCCACCTGCCTGAGTCGGGCGTTGGGCGGGTAGAGTGTCAGGGCCTCTGCCCCTGCTGGCCCAGATAATTCCCTGGCCCTCCTCAAGTGCAGCTCCCATGA---AGATAGACCCAGACTCTGAGCCACGCATCGGGCCAAGCATCCCAAGGTGGTGGAACCCAGTCAGGAGTCAAGACCAGAGGCC-GGAACTGCCCACACCCATGTT-CCTTCCACAGG--------GCCCGCCTGGCCAGTGGCGACACTGATACCATCCC i rheMac8.chr3 I 9 C 0 s macFas5.chr3 33559031 628 + 192294377 TCAACATGATTCACGGAAC-TCTGTCAC-CACAGAA--GCTGTGCTAAGGCCTGGGCATTCGTGT--GACATGGAGCCTGCAAGATCTGAAGTCTTAATGAGCTGCTTGCAGGAAAAGATCAAGTTTCACAATCGAGAATTATGGGGCATGATTTCTGCTGTGG-----------------CAAGGGGCCAGG--GCCGTCTCCTGGA-----GGAAATCTGGA------------------------------GAGAACATGC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCAGCGTA-CGCAGAGGCGCTGGCAGG--GGCCCCTCCCAACCTGCCCCTGCATGTGCGGGGCTTC-GCTCAGGAACAGGGGCACAGCTCCACTTCCAAAATGCGAGGGGTAGGGGCCCCAGTGTTGGACGCCTTCCGAGCCCTGGAGCCCTGGGAGGGGCTCACAAGCCCACCTGCCTGAGTCGGGCGTTGGGCGGGTAGAGTGTCAGGGCCTCTGCCCCTGCTGGCCCAGATAATTCCCTGGCCCTCCTCAAGTGCAGCTCCCATGA---AGATAGACCCAGACTCTGAGCCACGCATCGGGCCAAGCATCCCAAGGTGGTGGAACCCAGTCAGGAGTCAAGACCAGAGGCC-GGAACTGCCCACACCCATGTT-CCTTCCACAGG--------GCCCGCCTGGCCAGTGGCGACACTGATACCATCCC i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 4320046 628 - 9440265 TCAACATGATTCACGGAAC-TCTGTCAC-CACAGAA--GCTGTGCTAAGGCCTGGGCATTCGTGT--GACATGGAGCCTGCAAGATCTGAAGTCTTAATGAGCTGCTTGCAGGAAAAGATCAAGTTTCACAATCGAGAATTATGGGGCATGATTTCTGCTGTGG-----------------CAAGGGGCCAGG--GCCGTCTCCTGGA-----GGAAATCTGGA------------------------------GAGAACATGC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCAGCGTA-CGCAGAGGCGCTGGCAGG--GGCCCCTCCCAACCTGCCCCTGCATGTGCGGGGCTTC-GCTCAGGAACAGGGGCACAGCTCCACTTCCAAAATGCGAGGGGTAGGGGCCCCGGTGTTGGACGCCTTCCGAGCCCTGGAGCCCTGGGAGGGGCTCACAAGCCCACCTGCCTGAGTCGGGCGTTGGGTGGGTAGAGTGTCAGGGCCTCTGCCCCTGCTGGCCCAGATAATTCCCTGGCCCTCCTCAAGTGCAGCTCCCATGG---AGATAGACCCAGACTCTGAGCCACGCATCGGGCCAAGCATCCCAAGGTGGTGGAACCCAGTCAGGAGTCAAGACCAGAGGCC-GGAACTGCCCACACCCATGTT-CCTTCCACAGG--------GCCCGCCTGGCCAGTGGCGACACTGATACCATCCC i macNem1.NW_012019910v1 I 9 C 0 s cerAty1.NW_012002954v1 16910609 627 - 21915920 TCAACATGATTCACGGAAC-TCTGTCAC-CACAGAA--GCTGTGCTAAGGCCTGGGCATTCATGT--GACATGGAGCCTGCAAGATCTGAAGTCTTAATGAGTTGCTTGCAGGAAAAGATCAAGTTTCACAATCGAGAATTATGGGGCATGATTTCTGCTGTGG-----------------CAAGGGGCCAGG--GCCGTCTCCTGGA-----GGAAATCTGGA------------------------------GAGAACATAC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCAGTGTA-GGCAGAGGCACTGGCAGG--GGCCCCTCCCAACCTGCCCCTGCATGTGCGGGGCTTC-GCTCAGGAAC-GGGGCACAGCTCCACTTCCAAAATGCGAGGGGCAGGGGCCCAGGTGTTGGACGCCTTCCGAGCCCTGGAGCCCTGGGAGGGGCTCACAAGCCCACCTGCCTGAGTCGGGCGTCGGGCGGGCAGAGTATCAGGGCATCTGCCCCTGCTGGCCCAGATAATTCCCTGGCCCTCCTCAAGTGCAGCTCCCATGA---AGATAGACCCAGACTCTGAGCCACGCATCGGGCCAAGCATCCCAAGGTGGTGGAACCCAGTCAGGAGTCAAGACCAGAGGCC-GGAACTGCCCACACCCATGTT-CCTTCCACAGG--------GCCCGCCTGGCCAGTGGCGACACTGATACCATCCC i cerAty1.NW_012002954v1 I 9 C 0 s chlSab2.chr28 50027 627 - 21531802 TCAACATGATTCACAGAAC-TCTGTCAC-CACAGAAGGGCTGTGCTAAGGCCTGGGCATTCGTGT--GACATGGAGCCTGCAAGATCTGAAGTCTTAATGAGCTGCTTGCAGGAAAAGATCAAGTTTCACAATCGAGAATTATGGGGCATGATTTCTGCTGTGG-----------------CAAGGGGCCAGG--GCTGTCTCCTGGA-----GGAAATCTGGA------------------------------GAGAACATGC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCAGCGTA-GGCAGAGGCGCTGGCAGG--GGCCCCTCCCAACCTGCCCCTGCATGTGCGGGGCTTC-GCTCAGGAACACGGGCACAGCTCCACTTCCAAAATGCGAGGGGCAGGGGCCCAGGTGTTGGACGCCTTCTGAGCCCTGGAGCCCTGGGAGGGGCTCGAAAGCCCACCTGCCTGAGTTGGGCGTTGGGCGGGCAGAGTGTCAGGGCCTCTGCCTCTGCTGGCCCAGATAATTCCCCAGC---CCTCAAGTGCAGCTCCCATGA---AGATAGACCCAGATTCTGAGCCACACATCAGGCCAAGCATCCCAAGGTGGTGGAACCCAGTCAGGAGTCAAGACCAGAGGCC-GGAACCGCCCACACCCATGTT-CCTTCCACATG--------GCCCGCCTGACCAGTGGCGACACTGATGCCATCCC i chlSab2.chr28 I 9 C 0 s manLeu1.NW_012101810v1 74173 628 - 2515279 TCAACATGATTCACGGAAC-TCTGTCAC-CACAGAA--GCTGTGCTAAGGCCTGGGCATTCGTGT--GACATGGAGCCTGCAAGATCTGAAGTCTTAATGAGCTGCTTGCAGGAAAAGATCAAGTTTCACAATCGAGAATTATGGGGCATGATTTCTGCTGTGG-----------------CAAGGGGCCAGG--GCCGTCTCCTGGA-----GGAAATCTGGA------------------------------GAGAACATGC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCAGCGTA-GGCAGAGGCGCTGGCAGG--GGCCCCTCCCAACCTGCTCCTGCATGTGCGGGGCTTC-GCTCAGGAACAGGGGCACAGCTCCATTTCCAAAATGCGAGGGGCAGGGGCCCAGGTGTTGGACGCCTTCCGAGCCCTGGAGCCCTGGGAGGGGCTCACAAGCCCACCTGCCTGAGTCGGGCGTCGGGCGGGCAGAGTGTCAGGACCTCTGCCCCTGCTGGCCCAGATAATTCCCTGGCCCTCCTCAAGTGCAGCTCCCATGA---AGATAGACCCAGACTCTGAGCCATGCATCGGGCCAAGCATCCCAAGGTGGTGGAACCCAGTCAGGAGTCAAGACCAGAGGCC-GGAACTGCCCACACCCATGTT-CCTTCCACAGG--------GCCCGCCTGGCCAGTGGCGACACTGATACCATCCC i manLeu1.NW_012101810v1 I 9 C 0 s colAng1.NW_012117710v1 231319 628 + 6586416 TCAACATGATTCACGGAGC-CCTGTCAC-CGCAGAA--GCTGTGTTAAGGCCTGGGCATTCGTGT--GACATGGAGCCTGCAAGATCTGAAGTCTTAATGAGCTGCTTGCAGGAAAAGATCAAGTTTCACAGTCGAGAATTATGGGGCATGATTTCTGCTGTGG-----------------CAAGGGGCCAGG--GCCGTCTCCCGGA-----GGAAATCTGGA------------------------------GAGAACATGC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCGGCGCA-GGGAGAGGTGCTGGCAGG--GGCCCCTCCCAACCTGCCCCTGCATGTGCGGGGCTTT-GCTCAGGAACGCGGGCACAGCTCCGCTTCCAAAATGCGAGGGGCAGCGGCCCAGGTGTTGGACGCCTTCCGAGCCCTGGAGCCCTGGGAGGGGCTCGCAAGCCCACCTGCCTGAGTCGGGCGTCGGGCGGGCAGAGTGCCAGGGCCTCTGCCCCTGCTGGCCCAGATAATTCCCTGGCCCTCCTCAAATGCAGCTCCCATGA---AGATAGACCCAGACTCTGAGCCACAAATTGGGCCAAGCATCCCAGGGTGGTGGAACCGAGTCAGGGGTCAAGACAGGAGGCC-GGAACCGCCCACGCCCAAGTT-CCTTCCACAGG--------GCCCACCTGGCCAGTGGCGACATGGATGCCATCCC i colAng1.NW_012117710v1 I 9 C 0 s calJac3.chr2 146596084 614 - 204313951 CCAACATGATTTGCTGAGCTTCGGTAAC-TGCAGAA--GCTGTGCTAAGCCCTGGGCATTCATAT--GACATGGAACCTGCAGGATCTGAACTTTTAATAAGTTGCTTGCAGGAAAAGATCAGGCTTTATAATAGAGAATTATGAAGCATAATTTATATTGTGA-----------------TGAGGGGCCAGG--GCCGTCTCCTGGA-----GGAAATCTGGA------------------------------GACAACATGC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCAGCGTAGGGGAGAGACTCTGGTAGG--GGTCCCTCACACCTGGCCCCTGCATGTGTGGGCTTCT-GCTCAGCAACACTGACACAGCTCCATTTCCAGAGTGTGAGGGGCAAGGGCCCTGGTGTTGGATGCC-----------------CTGGGAGAGGCTCTGTAGCCCACCTGCCTGAGTCGGGCATCAGGCAGGGAGAGTGTTGGGGCCTCTGTCCCTGCTGGCCCAGATCATTCCCTGGTCCTCCTCAAGTGCAGCTCCCATTA---AGATAGAGCCAGAATCAG-TCCACGAATTGGGCCAAGCATTCCAAGGTGATAGAACAGAGTCAGGAGTCAATACTGGTGGCCAGGAACTGCCCGCTGCTGTGTTAAAATCCGCAGG--------ACCAGGCTGTCCGGTGGCAGCACTAATACCACCCC i calJac3.chr2 C 0 M 1056 s cebCap1.NW_016107703v1 441888 604 - 2125214 CCAATGTGATTTGCTGAGCCTTGGTCAC-TGCAGAA--GCTGTGCTAAGTCCTGGGCATTCATGT--GACATGGAGCCTGCAGGATCTGAAGTTTTAATAAGTTGCTTGCAGGAAAAGATCAGGTTTTACAATAGAGAATTATGAAGCACAATTCATATTGTGG-----------------CAAGGGGCCAGG--GCCATCTCCTGGA-----GGAAATCTGGA------------------------------GACAACGTGC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCAGCATAAAGGAGAGGCTCTGGCAGG--GGTCTCTCCCACCTGGCCCCTGCATGTGTGGGCTTCT-GCTCAGCAACACTGGCACAGCTCCATCTCCAGAGTGTGAGGGGCAAGGGCCCTGGTGTTGGATGCC-----------------CTGGGAGAGGCTCTGTAGCCCACCTACCTAAGTCAGGCATCAGGCAGGGAGAGTGTCGGGGCCTCTGCCCCTGCTGGCCCAGATCATTCCCTGGCTCTCCTCAAGTGCAGCTCCCATTA---GGATAGAGCCAGAATCAG-TCCACAAATCGGGCCAAGCGTCCCAAGGTGAT---------TCAGGAGTCAATAGCGGTGGCCAGGAACTGCCCACTGCTGTGTT-CCTTCCACAGG--------ACCAGCCTGTCTGGTGGCAGCACTAGTAGCACCCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55136 613 + 376347 CCAACGTGATTTGCTGAGCCTCGGTCAC-TGCAGAA--GCTGTGCTAAGCCCTGGGCATTCATGT--GACACGGAGCCTGCAGGATCTGAAGTTTTAATAAGTTGCTTGCAGGAAAAGATCAGGTTTTACAACAGAGGATCATGAAGCATAATTTATATTGTGG-----------------CAAGGGGCCAGG--GCCGTCTCCTGGA-----GGAAATCTGGA------------------------------GACAACATGC------------------------------------------------------------------------------------------CATAG-----------CCAGGCCAGCGTAGGGGAGAGGCTCTGGCAGG--GGTCCCTCCCAGCCGGCCCCTGCGTGTGTGGGCTTCT-GCTCAGCAACACTGGCGCAGCTCCATTTCCAGAGTGTGAGGGGCAAGGGCCCTGGTGTTGGATGCT-----------------CTGGGAGGGGCTGTGTAGCCCACCTGCCTGAATCGGGCATCAGGCAGGGAGAGCGTTGGGGCCTCTGCCCCTGCGGGCCGAGATCATTCCCTGGCCCTCCTCAAGTGCAGCTCCCATTA---AGATAGAGCCAGAATCAG-TCCACGAATCGGGCCAAGTGTCGCAAGGTGATAGAACAGAGTCAGGAGTCAATACCGGTGGCCAGGAACTGCCCACTGCTGTGTT-CATTCCGCAAG--------GCCAGCCTGTCCGGTGGCAGCTCTAATACCACCCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2176100 712 - 8137123 -cggcatgattcactgagcttctactatgcacaaaa--gctgtgccaggtgctgCG-ATTCAAGGTAGACGTGGAGCCTGCA-GATCAGAAGTCTTAATGAGTTGCTTGCAGGAATTGATCTGGTTTCACCACAGAGAATTATGTGGGATACTTTACACcatgggccctcaaactttttaaacaggggccagttcactgtccctcagaccgttggagagctggactgcagGCCTGGGACAAGTTGGTTGCTAAGCAGAACAGGCAGCGGCGGCCAAAACACctggcgggccggataaatgtccttagcgtgctgcatgtggcccacgggctgtagtttgaggacccctgCTTTACACAGTGGCAAGGGACCCAGGCTAGAAT--GAGGGAGCCTCTGGCAGGACAGCCCCTCCCTACCTGTCCCTGCATTCTCGAGGCTCTTTCCCAGCAAAGTTGGCACAGCTGTGTTTCCAA----------------------------GATGCCTCCAGAGCCCTGTG--CCTGGGAGTGGCTCTCCAACCCACCTGCTTCCTTCGGGCCTTAGCCAAGGAGAGTGTCAGGGC-TCGGCCCCTGCTGGTCATGAGCAGCAGCTG------CTGGCAGATGGCTCCTGTCC---ATATAAAGCTGGACTCAG--CCTCGAGCCAGGCCAAGTGTCCCTGGGAG----------------------------------GGAA----------CCATGTT-CACTTAGTGGGACACTAGCACTAGCTTGTCTAGCAAAGACTTTAATACCAACTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60988694 1252 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=466478.000000 s hg38.chr7_KI270899v1_alt 76138 97 + 190869 ATG--AAGCCTGTGAAAATTAAAGGGAATGGTGCATGTTTAGAGGCCACACACAGCAAGTAACCAATGAACACCCACCCTTCATGCTTGGTTTTCATCA s gorGor5.CYUI01015914v1 37277 97 - 432965 ATG--AACCCTGTGAAAATTAAAGGGAATGGTGCATGTTCAGAGGCCACACGCAGCAAGTAGCCTATGAACACCCACCCTTTATGCTTGCTTTTCACCA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943331 99 + 185818997 ATGGAAGCTCTGTGAAAATTAAAGGGAATGGTGCATGTTTGGAGGCCACGTGCAGCAAGTGACCAGTAAACACCCACCATTTATGCTTGGTTTTCATCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33559659 99 + 192294377 ATGGAAGCTCTGTGAAAATTAAAGGGAATGGTGCATGTTTGGAGGCCACGTGCAGCAAGTGACCAGTAAACACCCACCATTTATGCTTGGTTTTCATCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4320674 99 - 9440265 ATGGAAGCTCTGTGAAAATTAAAGGGAATGGTGCATGTTTGGAGGCCACGTGCAGCAAGTGACCGGTAAACACCCACCATTTATGCTTGGTTTTCATCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16911236 99 - 21915920 ATGGAAGCTCTGTGAAAATTAAAGGGAATGGTGCATGTTTGGAGGCCACGTGCAGCAAGTGACCGGTAAACACCCACCATTTATGCTTGGTTTTCATCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 50654 99 - 21531802 ATGGAAGCTCTGTGAAAATTAAAGGGAATGGTGCATGTTTGGAGGCCACGTGCAGCAAGTGACCGGTAAACACCCACCATTTATGCTTGGTTTTCATCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 74801 99 - 2515279 ATGGAAGCTCTGTGAAAATTAAAGGGAATGGTGCATGTTTGGAGGCCACGTGCAGCAAGTGACCGGTAAACACCCACCATTTATGCTTGGTTTTCATCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 231947 99 + 6586416 ACGGAAGCTCTGTGAAAATTAAAGGCAATGGTGCATGCTTGGAGGCCACGTGCAGCAAGTGACCAGCAAACACCCACCATTTGTGTTTGGTTTTCATCA i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 442492 99 - 2125214 ATGGAATCTCTGTGAAAATTAAAGGGAATGGTACATGTCTAGAGGCCACGTGCAGCAAGTGATCTATAAACACTCACCCTTTATGCTTGGTTTTAATAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55749 99 + 376347 ATGGAATCTCTGTGAAAATTAAAGGGAATTGTACATGTCTAGAGGCCACGTGCAGCAAATGATCTATAAACGTTCACCCTTTATGCTTGGTTTTAATAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2176812 98 - 8137123 CTGGAATGTTCATCCAAATTCAAGGAGCTGACGCATGTTTAGAGTCTGCTTAGAGCAAGTGGTCCATAAATGTCCTCC-TTTATTCTTGGTTTTCATCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60988694 1252 - 77573801 I e calJac3.chr2 146596698 1056 - 204313951 M e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=6168.000000 s hg38.chr7_KI270899v1_alt 76235 3 + 190869 CTG s gorGor5.CYUI01015914v1 37374 3 - 432965 TTG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943430 3 + 185818997 CTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33559758 3 + 192294377 CTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4320773 3 - 9440265 CTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16911335 3 - 21915920 CTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 50753 2 - 21531802 CT- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 74900 3 - 2515279 CTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 232046 2 + 6586416 CT- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 57717440 3 + 204313951 CTG i calJac3.chr2 n 0 C 0 s cebCap1.NW_016107703v1 442591 3 - 2125214 TTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55848 3 + 376347 TTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2176910 3 - 8137123 TTG i otoGar3.GL873611 C 0 I 6 e canFam3.chr6 60988694 1252 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=89052.000000 s hg38.chr7_KI270899v1_alt 76238 12 + 190869 GGCCAGCAGGGG s gorGor5.CYUI01015914v1 37377 12 - 432965 GGCCAGCAGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943433 12 + 185818997 GGCCAGCAGGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33559761 12 + 192294377 GGCCAGCAGGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4320776 12 - 9440265 GGCCAGCAGGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16911338 12 - 21915920 GGCCAGCAGGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 50755 12 - 21531802 GGCCAGCAGGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 74903 12 - 2515279 GGCCAGCAGGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 232048 12 + 6586416 GGCCAGCAGGGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 57717443 12 + 204313951 GGCCAGCAGGGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 442594 12 - 2125214 GGCCAGCAGGGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55851 12 + 376347 GGCCAGCAGGGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 5960457 12 + 8137123 GACCAGCAGGGG i otoGar3.GL873611 n 6 C 0 e canFam3.chr6 60988694 1252 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=4909.000000 s hg38.chr7_KI270899v1_alt 76250 1 + 190869 C s gorGor5.CYUI01015914v1 37389 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943445 1 + 185818997 C i rheMac8.chr3 C 0 I 407 s macFas5.chr3 158734919 1 - 192294377 C i macFas5.chr3 n 0 C 0 s macNem1.NW_012019910v1 4320788 1 - 9440265 C i macNem1.NW_012019910v1 C 0 I 460 s cerAty1.NW_012002954v1 16911350 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 I 415 s chlSab2.chr28 50767 1 - 21531802 C i chlSab2.chr28 C 0 I 222 s manLeu1.NW_012101810v1 74915 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 I 865 s colAng1.NW_012117710v1 232060 1 + 6586416 C i colAng1.NW_012117710v1 C 0 I 407 s calJac3.chr2 57717455 1 + 204313951 C i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 442606 1 - 2125214 T i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55863 1 + 376347 T i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 5960469 1 + 8137123 C i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60988694 1252 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=655124.000000 s hg38.chr7_KI270899v1_alt 76251 137 + 190869 GGAGGCCCCAGCACTCTCCCTGCCTGATGCCCGACTCAGGCAGGTGGGCTTGAGAGCCCCTCCCGGGGCTCCAGGG---CTCTGAAGGCATCCAACACCTGGGCCCCTGCCCCTCACATTTTGGAAGTGGAGCTGTGCCC s gorGor5.CYUI01015914v1 37390 137 - 432965 GGAGGCCCCAGCACTCTCCCTGCCCGATGCCCGACTCAGGCAGGTGGGCTTGAGAGCCCCTCCCGGGGCTCCAGGG---CTCTGAAGGCGTCCAACACCTGGGCCCCTGCCCCTCACATTTTGGAAGTGGAGCTGTGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 151875868 137 - 185818997 AGAGGCCCTGACACTCTACCCGCCCAACGCCCGACTCAGGCAGGTGGGCTTGTGAGCCCCTCCCAAGGCTCCAGGG---CTCGGAAGGCGTCCAACACTGGGGCCCCTACCCCTCGCATTTTGGAAGTGGAGCTGTGCCC i rheMac8.chr3 n 407 C 0 s macFas5.chr3 158734920 137 - 192294377 AGAGGCCCTGACACTCTACCCGCCCAACGCCCGACTCAGGCAGGTGGGCTTGTGAGCCCCTCCCAGGGCTCCAGGG---CTCGGAAGGCGTCCAACACTGGGGCCCCTACCCCTCGCATTTTGGAAGTGGAGCTGTGCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 5119793 137 + 9440265 AGAGGCCCTGACACTCTACCCACCCAACGCCCGACTCAGGCAGGTGGGCTTGTGAGCCCCTCCCAGGGCTCCAGGG---CTCGGAAGGCGTCCAACACCGGGGCCCCTACCCCTCGCATTTTGGAAGTGGAGCTGTGCCC i macNem1.NW_012019910v1 n 460 C 0 s cerAty1.NW_012002954v1 5004886 137 + 21915920 AGATGCCCTGATACTCTGCCCGCCCGACGCCCGACTCAGGCAGGTGGGCTTGTGAGCCCCTCCCAGGGCTCCAGGG---CTCGGAAGGCGTCCAACACCTGGGCCCCTGCCCCTCGCATTTTGGAAGTGGAGCTGTGCCC i cerAty1.NW_012002954v1 n 415 T 29577 s chlSab2.chr28 21481347 137 + 21531802 AGAGGCCCTGACACTCTGCCCGCCCAACGCCCAACTCAGGCAGGTGGGCTTTCGAGCCCCTCCCAGGGCTCCAGGG---CTCAGAAGGCGTCCAACACCTGGGCCCCTGCCCCTCGCATTTTGGAAGTGGAGCTGTGCCC i chlSab2.chr28 n 222 C 0 s manLeu1.NW_012101810v1 2440680 137 + 2515279 AGAGGTCCTGACACTCTGCCCGCCCGACGCCCGACTCAGGCAGGTGGGCTTGTGAGCCCCTCCCAGGGCTCCAGGG---CTCGGAAGGCGTCCAACACCTGGGCCCCTGCCCCTCGCATTTTGGAAATGGAGCTGTGCCC i manLeu1.NW_012101810v1 n 865 C 0 s colAng1.NW_012117710v1 6354671 137 - 6586416 AGAGGCCCTGGCACTCTGCCCGCCCGACGCCCGACTCAGGCAGGTGGGCTTGCGAGCCCCTCCCAGGGCTCCAGGG---CTCGGAAGGCGTCCAACACCTGGGCCGCTGCCCCTCGCATTTTGGAAGCGGAGCTGTGCCC i colAng1.NW_012117710v1 n 407 C 0 s calJac3.chr2 57717456 120 + 204313951 AGAGGCCCCAACACTCTCCCTGCCTGATGCCCGACTCAGGCAGGTG--------------------GGCTACAGAGCCTCTCCCAGGGCATCCAACACCAGGGCCCTTGCCCCTCACACTCTGGAAATGGAGCTGTGTCA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 442607 111 - 2125214 GGAGGCCCTGACACTCTCCCTGCCCGATGCCCAACTCAGGTAGGTG--------------------GGTTCCGGGG---CTCTGAAGGCAT------CCTGGGCCCCTGCCCCTCACATTTTGGAAATGGAACTGTGCCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55864 95 + 376347 GGAGGCCCCGACACTCTCCCTGCCCAATGCCCGACTCAGG---------------------------------------CTCTGAAGGCAT------CCTGGGCCCCTGTCCCTCACACTTTGGAAATGGAGCTGTGCCA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 5960470 106 + 8137123 -CGAGCCCTGACACTCTCCTTGGCTAAGGCCCGAAGGAAGCAGGTGGGTTGGAGAGCCACTCCCAGG--CACAGGG---CTCTGGAGGCATC----------------------------TTGGAAACACAGCTGTGCCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60988694 1252 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=53370.000000 s hg38.chr7_KI270899v1_alt 76388 15 + 190869 GTGCTGCTGAGCGAA s gorGor5.CYUI01015914v1 37527 15 - 432965 GTGCTGCTGAGCGAA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 151876005 15 - 185818997 CTGTTCCTGAGCGAA i rheMac8.chr3 C 0 T 26888 s macFas5.chr3 158735057 15 - 192294377 CTGTTCCTGAGCGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 5119930 15 + 9440265 CTGTTCCTGAGCGAA i macNem1.NW_012019910v1 C 0 n 0 s chlSab2.chr28 21481484 15 + 21531802 GTGTTCCTGAGCGAA i chlSab2.chr28 C 0 T 26193 s manLeu1.NW_012101810v1 2440817 15 + 2515279 CTGTTCCTGAGCGAA i manLeu1.NW_012101810v1 C 0 T 26742 s colAng1.NW_012117710v1 6354808 14 - 6586416 GCGTTCCTGAGCAA- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 57717576 15 + 204313951 GTGTTGCTGAGCAGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 442718 15 - 2125214 GTGCTGCTGAGCAAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55959 15 + 376347 GTGCTGCTGAGCAAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 5960576 15 + 8137123 ACTTTGCTGGGAAAG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60988694 1252 - 77573801 I e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=10909.000000 s hg38.chr7_KI270899v1_alt 76403 5 + 190869 AGCCC s gorGor5.CYUI01015914v1 37542 5 - 432965 AGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 158735072 4 - 192294377 -GCCC i macFas5.chr3 C 0 T 26903 s colAng1.NW_012117710v1 6354822 5 - 6586416 AGCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 57717591 5 + 204313951 AGCCC i calJac3.chr2 C 0 n 0 s cebCap1.NW_016107703v1 442733 5 - 2125214 AGCCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55974 5 + 376347 AGCCT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 5960591 5 + 8137123 AGCCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e rheMac8.chr3 151876020 26888 - 185818997 T e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=1500.000000 s hg38.chr7_KI270899v1_alt 76408 1 + 190869 C s gorGor5.CYUI01015914v1 37547 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s colAng1.NW_012117710v1 6354827 1 - 6586416 C i colAng1.NW_012117710v1 C 0 T 26162 s cebCap1.NW_016107703v1 442738 1 - 2125214 C i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55979 1 + 376347 C i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 5960596 1 + 8137123 C i otoGar3.GL873611 C 0 T 54880 e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e calJac3.chr2 57717596 0 + 204313951 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=182.000000 s hg38.chr7_KI270899v1_alt 76409 2 + 190869 AT s gorGor5.CYUI01015914v1 37548 2 - 432965 AT i gorGor5.CYUI01015914v1 C 0 C 0 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e otoGar3.GL873611 5960597 54880 + 8137123 T e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e aotNan1.NW_018514293v1 55980 0 + 376347 C e cebCap1.NW_016107703v1 442739 0 - 2125214 C e calJac3.chr2 57717596 0 + 204313951 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=89976.000000 s hg38.chr7_KI270899v1_alt 76411 161 + 190869 CCAGCTCTCCGAGAACCAGACGAGGGGCAAGGGAGATGAAGTCTTCCTGGAAACTTGGACTCCAGCTG-GTGTGGGGGTCAGAGCA-GCAGGCTGAGCCTTCAGGGGGCCTCCGGCAGGCTCCCAAGGCTGCGCTGTGCGTCTCTTCCACCACACGCACTGGG s gorGor5.CYUI01015914v1 37550 161 - 432965 CCAGCTCTCCGAGAACCAGATGAGGGGCAAGGGAGATGAAGTCTTCCTGGAAACTTGGACTCCAGCTG-GTGTGGGGGTCAGAGCA-GCAGGCTGAGCCTTCAGGGGGCCTCCGGCAGGCTCCCAAGGCTGCACTGTGCGTCTCTTCCACCACACGCACTGGG i gorGor5.CYUI01015914v1 C 0 C 0 s cebCap1.NW_016107703v1 442739 156 - 2125214 ------ATCCAAGAGCCAGATGAAGGGCTAGGGAGATGATGTCTTCCTAGAGACTTGGACTCCAGGTG-GCGTGGGGGTCAGGGCAGGCAGGCTGAGCCTTGAGGGCACCTCTAGCAGGCTCCTAAGGCTGCAGTGTGCGTCTCTTCCACCACACACACTGGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 55980 156 + 376347 ------ATCCAAGAACCATATGAAGGGGGAGGGAGATGACATCTTCCTAGAGACTTGGACTCCAGGTG-GCATGGGGGTCAGGGCAGGCAGGCTGAGCCTTGAGGGGGCCTCCAGCAGGCTCCTAAGGCTGCAGTGTGCGTCTCTTCCACCACACACACTGGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2176919 141 - 8137123 CCGGCTCTCAGAATAACAGGATGGGGGTAAAGGAGATGAGCTCCTCCTTGGGATTTGGTCTCTAGGTGTGAATGGGGGTC--------CTAGCTGACCCTACGGGG--------------TCCTGAGGTCACTGTGTGCATCTCTGCCCCCATGTGCACTGGG i otoGar3.GL873611 I 6 I 823 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e calJac3.chr2 57717596 0 + 204313951 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=131455.000000 s hg38.chr7_KI270899v1_alt 76572 291 + 190869 GCATGAGGCCAAGGGCATCGTCTGCAGAGCGAGAGGGAAACTGGGGTGGCAGGGCTTGCGGGCGCAGGACAGCGCCAAGGGGCTTTCGTCTCCCAGCATTAGGACGACCTTGTCCTCTGCCCCTGTCTGGGGGCCGCTGGGTCCCTCCTCACAGGAGCGAGGCAGGCAGCTCTGGTGCAGGGCCGGCCAACAGGCCTCAGATCTGGAGTCACAGACCCAAGGACGAGGACAAGGGCCCCACACACCTCCAAGCAGGCCCTGAGGTACTGACGGGCAGGCAGGACCCTCTGT s gorGor5.CYUI01015914v1 37711 291 - 432965 TCGTGAGGCCAAGGGCATCGTCTGCAGAGCGAGAGGGAAACTGGGGTGGCAGGGCTTGCGGGCGCAGGACAGCGCCAAGTGGCTTTCGTCTCCCAGCATTAGGACGACCTTGTCCTCTTCCCCTGTCTGGGGGGTACTGGGTCCCTCCTCACAGGAGCGAGGCAGGCAGCTCTGGTGCAGGGCCGGCCAACAGGCCTCAGATCTGGAATCACAGACCCAAGGACGAGGACAAGGGCCCCACACACCTCCAAGCAGGCCCTGAGGTAGTGACGGGCAGGCAGGACCCTCTCT i gorGor5.CYUI01015914v1 C 0 C 0 s cebCap1.NW_016107703v1 442895 267 - 2125214 GCATGGAGCCAAGGGCATCGTCTGCAGAGTGAGAAGGAAACTGGGGTGACAGGGCTTGTGGGCACAGGA------------------------CAGCATTAGAACGACCTTGTCCTCTGCCTCTGTCTAGGGACCGCTGGGTCCCTCCTGACAGGAACGAGGCAGGCAGCTCTGGTGCAGGGCCTGCCAACAGGCCTCAGATGTGGAGTCACAGACCCCAGGATGAAGACAAGGGCCCCAGGAACCTCCAAGCAAGCCCTGAGCCAGTGACGGGCAGGCAGGACCCTCTCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 56136 281 + 376347 GCGTGGAGCCAAGTGCACCGTCTGCAGAGCGAGAGGGAAACTGGGGTGACAGGGCTTGTGGGCACAGGATA----------GCTTTCATCTCCCAACTTTAGAACGACCTTGTCCTCTGCCTCTGTCTAGGGACCACTGGGTCCCTCCTGACAGGAGCGAGGCAGGCAGCTCTGGTGCAGGGCCTGCCAACAGGCCTCAGATGTGGAGTCCCAGACCCCAGGATGAGGACAAGGGCCCCAGGAACCTCCAAGCAAGCCCTGAGCCAGTGACAGGCAGGCAGGACCCGCTCT i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e otoGar3.GL873611 2177060 823 - 8137123 I e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e calJac3.chr2 57717596 0 + 204313951 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=52625.000000 s hg38.chr7_KI270899v1_alt 76863 124 + 190869 GACCCTTCCTCACTCCTCACCCAGAGAAGCCAGGAGAGCGGGATGCCGAGGGACTGGAACAGAGAAGGCCTCTTGCAGGGGCT-CATGGACAGGAAAACAGAGGAGCCTGCCAGGGCCATGGCCA s gorGor5.CYUI01015914v1 38002 124 - 432965 GACCCTTCCTCACTCCTCACCCAGAGAAGCCAGGAGAGCGGGATGCCGAGGGACTGGAACAGAGAAGGCCTCTCACAGGGGCT-CATGGACAGGAAAACAGAGGAGCCTGCCAGGGCCACGGCCA i gorGor5.CYUI01015914v1 C 0 C 0 s cebCap1.NW_016107703v1 443162 125 - 2125214 GACCCTTCCCCACTCCTCACCCTGAGGACCCAGGAGAGCTGGATGCAGAGGGACTGGAACAGAGAAGGCCTCCCACTAGAGCCTCATGGACAGGAAAACAGAGGAGCCTGCCAGGGCCATGGACA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 56417 71 + 376347 GACCTTTCCCCACTCCTCAATCAGAGGACC------------------------------------------------------CATGGACAGGAAAACAGAGGGGCCTGCCGGGGCCATGGACA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2177883 115 - 8137123 GACCCTTCCCCAGTTCT--------ATAGCTGGGAGAGCTGGAT-CAGAGGGGCTGGATCAGAGAAGGTCTGCCCTGGGCACA-CATGGATGGGAAGACAGATGTGTCGGTTGTGGCCCAGGGGA i otoGar3.GL873611 I 823 C 0 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e calJac3.chr2 57717596 0 + 204313951 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1433 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10443 0 - 29993 C a score=73971.000000 s hg38.chr7_KI270899v1_alt 76987 75 + 190869 CTGGCAGGACAAGTGCCCACTGGAGCCAAGGCC-TGGGCAGGGGAGAGGTCTGCAGAGCAGAGCCCGGCCCTGGGT s panTro5.chr7_NW_015973523v1_random 10443 75 - 29993 CTGGCAGGACAAGTGCCCACTGGAGCCAAGGCC-CGGGCAGGGGAGAGGTCTGCAGAGCAGAGCCCGGCCCTGGGT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1433 75 + 9642 CTGGCAGGACAAGTGCCCACTGGAGCCAAGGCC-CGGGCAGGGGAGAGGTCTGCAGAGCAGAGCCCGGCCCTGGGT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38126 75 - 432965 CTGGCAGGACAAGTGCCCACTGGAGCCAAGGCC-CGGGCAGGGGAGAGGTCTGCAGAGCAGAGCCTGGCCCTGGGT i gorGor5.CYUI01015914v1 C 0 C 0 s cebCap1.NW_016107703v1 443287 65 - 2125214 CTGGAAGGACAAGTGCCCAATGGAGCCAAGGCCTCGGGCAGGGCAGATGTCTGAGACACAGAACC----------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 56488 65 + 376347 CTGGAAGGACGAGTGCCCACTGGCACCAAGGCCTTGGGCAGGGCAGATGTCTGAGACACAGAACC----------- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2177998 60 - 8137123 TCAGAAAGGCATGTGCCCCCT----CCAAATGC-AAAGCTGGTGAGG----------GCAGAGCCTAGCCTTGAT- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e calJac3.chr2 57717596 0 + 204313951 I e nomLeu3.chr20 96740 0 + 85365473 C a score=32524.000000 s hg38.chr7_KI270899v1_alt 77062 92 + 190869 TCCCACAGA-----GGCGGCTCGCACAGTGGCTGATTTGCCACTCGTTCACT---CAGTTTAGTGAGCAGCACGTGAAATGCTAAATCCGTGTGGGCTCA s gorGor5.CYUI01015914v1 38201 92 - 432965 TCCCACAGA-----GGCGGCTCACACAGTGGCTGATTTGCCACTCGTTCACT---CAGTTTAGTGAGCAGCACGTGAAATGCTAAATCCGTGTGGGCTCA i gorGor5.CYUI01015914v1 C 0 C 0 s cebCap1.NW_016107703v1 443352 72 - 2125214 -------------------------CAGTGGCTGATTCACAATTGGTTCACT---CAGCTTAGTTAGTGGTACATGAAATGCTAAATTCATGTGGGCTCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 56553 72 + 376347 -------------------------CAGTGGCCGATTAACAATTGGTTCACT---CAGCTTAGTTAGCGGTACATGAAATGCTAAATTCATGCGGGCTCA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2178058 98 - 8137123 TCCTACAGAAACAGGCCAGCTCCTGTGCTCATGGATGGGTCATGTGTTCACTTGACAGACGGATATATTTTACACGAAA--CTAAATTCACAAGGGCTCA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e calJac3.chr2 57717596 0 + 204313951 I e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1508 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10518 0 - 29993 C a score=14970.000000 s hg38.chr7_KI270899v1_alt 77154 23 + 190869 GGAGC-AGCCTCAGATGAGGAGA-A- s gorGor5.CYUI01015914v1 38293 23 - 432965 GGAGC-AGCCTCAGATGAGGAGA-A- i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chr2 146597754 25 - 204313951 GGAGCAAGCATTAGATGAGGAAAGG- i calJac3.chr2 M 1056 I 1 s cebCap1.NW_016107703v1 443424 23 - 2125214 GGAGC-AGCCTTAGATGAGGAAA-G- i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 56625 23 + 376347 GGAGC-AGCCTTAGATGACGAAG-G- i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 2178156 23 - 8137123 AGAAC-AGCCCTAG-TCAGGAAA-AC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e nomLeu3.chr20 96740 0 + 85365473 C e panPan2.chrUn_NW_014023765v1 1508 0 + 9642 C e panTro5.chr7_NW_015973523v1_random 10518 0 - 29993 C a score=24922.000000 s hg38.chr7_KI270899v1_alt 77177 14 + 190869 TCCCACAGTTCGTC s panTro5.chr7_NW_015973523v1_random 10518 14 - 29993 TCCCACAGTTCGTC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1508 14 + 9642 TCCCACAGTTCGTC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38316 14 - 432965 TCCCACAGTTCGTC i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chr2 146597780 14 - 204313951 CCCCACAGTTCCTC i calJac3.chr2 I 1 C 0 s cebCap1.NW_016107703v1 443448 14 - 2125214 CCCCACAGAGCCTC i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 56649 14 + 376347 CCCCACAGCTCCTC i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2178179 14 - 8137123 CTCCAGGGTTCATC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e canFam3.chr6 60988694 1252 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e nomLeu3.chr20 96740 0 + 85365473 C a score=128771.000000 s hg38.chr7_KI270899v1_alt 77191 76 + 190869 GGTGAAGCC-CCCACCCCAAATCTCCCACAGTCCTGCTCATGCCCAGGGCGGCAGGTGTCCTTTCTAATGGGTGAGA s panTro5.chr7_NW_015973523v1_random 10532 76 - 29993 AGCGAAGCC-CCCACCCCAAATCTCCCACAGTCCTGCTCATGCCCAGGGCGGCAGGTGTCCTTTCTAATGGGTGAGA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1522 76 + 9642 AGCGAAGCC-CCCACCCCAAATCTCCCACAGTCCTGCTCATGCCCAGGGCGGCAGGTGTCCTTTCTAATGGGTGAGA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38330 76 - 432965 GGTGAAGCC-CCCACCCCAAATCTCCCACAGTCCTGCTCATGCCCAGGGCGGCAGGTGTCCTTTCTAATGGGTGAGA i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chr2 146597794 75 - 204313951 AGTGAAGCCATCCATCCCAAATC-TCCAAAGTCCCTCCCATGCCT-GGGCAGCAAGTGTCCTTTCTAATGGGTAAGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 443462 75 - 2125214 AGTGAAGCC-TCCACCCCAAATCTTCTGCAGTCCCTCCCATGCCC-GGGCAGCAGGTGTCCTTTCTAATGGGTAAGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 56663 75 + 376347 AGTGAAGCC-TCCGCCCCAAATCTTCTGCAGTCCCTCCCATGCCC-GGGCAGCAGGTGTCCTTTCCAATGGGTAGGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2178193 36 - 8137123 AGTAGAGAC-CCCA---------------------------GCTCTGGG------------TCTGTACTGGG-AAGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60989946 70 - 77573801 GGTAAAGCC-CCCA------AACTCTCATAATCCTGCTCCTGCCCCGGGCTATGGATGCCCCTTGTTACTGGTAAGA i canFam3.chr6 I 1252 I 1401 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e nomLeu3.chr20 96740 0 + 85365473 C a score=78267.000000 s hg38.chr7_KI270899v1_alt 77267 52 + 190869 G-----------CCAGGAGCTGGGGGCTGCGTGCGCTGT------------GGcccctcacccat-gggggcc---ttc s panTro5.chr7_NW_015973523v1_random 10608 52 - 29993 G-----------CCAGGAGCTGGGGGCTGCGTGCGCTGT------------GGcccctcacccat-gggggcc---ttc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1598 52 + 9642 G-----------CCAGGAGCTGGGGGCTGCGTGCGCTGT------------GGcccctcacccat-gggggcc---ttc i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38406 52 - 432965 G-----------CCAGGAGCTGGGGGCTGCGTGCGCTGT------------GGccgctcacccgt-gagggcc---ttc i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chr2 146597869 60 - 204313951 GC----TCCTCCCCAGGAGCTGGGGACTGTGTGCACTGT------------GGcttctcacccgtggggggcc---ttc i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 443537 59 - 2125214 GC----CCCTCCCTGAGAGCTGGGGGCTGTGTGCACTGT------------GGcccctcacctgt-ggggtcc---ttc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 56738 59 + 376347 GC----CCCTCCCCGGGAGCTGGGGGCTGCGTGCACTGT------------GGcccctcacccgt-ggggtcc---ttc i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2178229 78 - 8137123 GCTCTTTCCTCCTCAAGGGCTGGGCGCAAAGTGCTTCACTCAGCATGAATAGctccctcactagc-acgggctacactc i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e canFam3.chr6 60990016 1401 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e macFas5.chr3 158735076 26903 - 192294377 T e rheMac8.chr3 151876020 26888 - 185818997 T e nomLeu3.chr20 96740 0 + 85365473 C a score=164211.000000 s hg38.chr7_KI270899v1_alt 77319 73 + 190869 caggaccccagcagatgcctgaaac--cggggagtgcccgaccctggaga----gtgtcttttcctatacacacatatc s panTro5.chr7_NW_015973523v1_random 10660 73 - 29993 caggaccccagcagatgcctgaaac--cggggagtgcccgaccctggaga----gtgtctcttcctatacacacatatc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1650 73 + 9642 caggaccccagcagatgcctgaaac--cggggagtgcccgaccctggaga----gtgtcttttcctatacacacgtatc i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38458 73 - 432965 caggaccccagcagatgcctgaaac--cggggagtgcccgaccctggaga----gtgtcttttcctatacacacatatc i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33559773 69 + 192294377 CAGGACCCCAGCAGAGGCCTGAAAC--TGGGCAGTGCCAAACCTCAGA--------GCCTTTTCCGACACATACATATC i macFas5.chr3 C 0 C 0 s calJac3.chr2 146597929 73 - 204313951 caggactcctgcagatgcctgaaac--tgaagagtgctaaaccccagaga----gtgtcttttcctgcacatacatacT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 443596 73 - 2125214 caggactccagcagatgcctgaaac--tagacagtgctaaaccccagaga----gtgtcttttcctacacatacatacc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 56797 73 + 376347 caggactccagcaaatgcctgaaac--tggagagtgctaaaccccagaga----gtggcttttcctgcacgtatatacc i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2178307 79 - 8137123 cgagacccctgcggctgcctggaactgtggagggtctcaaaccctatgtatactgtgtcttttcctatccctacctatc i otoGar3.GL873611 C 0 I 1465 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e canFam3.chr6 60990016 1401 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e rheMac8.chr3 151876020 26888 - 185818997 T e nomLeu3.chr20 96740 0 + 85365473 C a score=333428.000000 s hg38.chr7_KI270899v1_alt 77392 186 + 190869 caCCtgt-gtgggtg------------------cgtagctgagtgtgtatgtacacc--tgtg--------tgtgaaaatatctgtgtttgcattggtgtgtgtgtccatga-------gtttctgtgtctgtgtgg------------------------------------------------------------gtgtgtgtgcccatgag----tgtgagtgtgtgaatgtgtgtgggtgtgtaggtgagtgtgga----tgtgtgtgtgcgagtgtgaa----------------------------------------------------tgtgtg s panTro5.chr7_NW_015973523v1_random 10733 203 - 29993 caCCtgt-gtgggtgtgtgaatgtgtgtgggtgcgtagctgagtgtgtatgtacacc--tgtg--------tgtgaaaatatctgtgtttgcattggtgtgtgtgtccatga-------gtttctgtgtctgtgtgg-------------------------------------------------------------tgtgtgtgcccatgag----tgtgagcgtgtgaatgtgtgtgggtgtgtaggtgagtgtgga----tgtgtgtgtgcaagtgtgaa----------------------------------------------------tgtgtg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1723 204 + 9642 caCCtgt-gtgggtgtgtgaatgtgtgtgggtgcgtagctgagtgtgtatgtacacc--tgtg--------tgtgaaaatatctgtgtttgcattggtgtgtgtgtccatga-------gtttctgtgtctgtgtgg------------------------------------------------------------gtgtgtgtgcccatgag----tgtgagtgtgtgaatgtgtatgggtgtgtaggtgagtgtgga----tgtgtgtgtgcgagtgtgaa----------------------------------------------------tgtgtg i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38531 204 - 432965 caCCtgt-gtgggtgtgtgaatgtgtgtgggtgcgtagctgagtgtgtatgtacacc--tgtg--------tgtgaaaatatctgtgtttgcattggtgtgtgtgtccatga-------gtttctgtgtctgtgtgg------------------------------------------------------------gtgtgtgtgcccatgag----tgtgagtgtgtgaatgtgtgtgggtgtgtaggtgagtgtgga----tgtgtgtgtgcgagtgtgaa----------------------------------------------------tgtgtg i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33559842 318 + 192294377 CACCtgt-gtgggtgtgtggatgtgtgtgggtgtgtag----gtgtgtgtgtacacctgtgtg--------tgtgaaaatatctgtgtttgtatttgtgtgtgtgtccgtg-----------tctgtgactctgtgggggtgtgggtgtgcaggtgtgtgtgtacacgtgtgtgtctgtgaaaatatctgtgtatttgtgtgtgtgtccataagtgtctgtgtctgtgtggatgtgtgtgggtgtgtaggtgtatgtgtacacctgtgtgtgagtatgtgtgaaaatatctgtgtttgtatttgtgtgtgtgtctgtgtcagtgtctgtgtgggtgtgcgtg i macFas5.chr3 C 0 C 0 s calJac3.chr2 146598002 215 - 204313951 CACCtgt-gtgggtgtttgaatatgtgtgggtgtgtaggtga--gtgtgtgtacatc--tgtgtgtgactgtgtgaaaatgtc--tgttcgcattggtgtatgtgtccatattgtatgagtgtctgtgtctgtgtgg------------------------------------------------------------gtatgtgtacccatgag----tatgagtgtgtgaatatgtgtgggtgtgtaggtgaatgtgga----tgtgcatgtgcaagtgtgaa----------------------------------------------------tgtgtg i calJac3.chr2 C 0 I 1 s cebCap1.NW_016107703v1 443669 215 - 2125214 caCCtgt-gtgggtgtgtgaatgtgtgtgggtgtgtaggtgaatatgtatgtacatc--tgtgtgtgactgtgtgaaaatgtctgtgtttgcatgggtgtatgtttccatattgt----gtgtctgtgtctgtgtgg------------------------------------------------------------gtgtgtgtgcccatgag----tatgagtgtgtgaatgcgtgtgggtgtgtaggtgagtgtaac----tatgcatgtgcaagggtgaa----------------------------------------------------tatgtg i cebCap1.NW_016107703v1 C 0 I 70 s aotNan1.NW_018514293v1 56870 197 + 376347 caCCtgtggtatgtatgtgtatgtgtgtgggtgt----gtgaatgtgtgtgtacatc--tgtgtgtgac--tgtgaaaatgtctgtgtttgcattggtgtctgtgtccatatt------gtgtatgtgtctgtg------------------------------------------------------------------tgtgtgccc----g----tgtgtgtgtgtgaaggtatgtgggtgtgt-ggtgagtgtgga----tgtgcatgtgcaaggctgaa----------------------------------------------------tgtgtg i aotNan1.NW_018514293v1 C 0 I 1 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e rheMac8.chr3 151876020 26888 - 185818997 T e nomLeu3.chr20 96740 0 + 85365473 C a score=6041.000000 s hg38.chr7_KI270899v1_alt 77578 4 + 190869 cccc s panTro5.chr7_NW_015973523v1_random 10936 4 - 29993 cccc i panTro5.chr7_NW_015973523v1_random C 0 I 1 s panPan2.chrUn_NW_014023765v1 1927 4 + 9642 cccc i panPan2.chrUn_NW_014023765v1 C 0 I 1 s gorGor5.CYUI01015914v1 38735 4 - 432965 cccc i gorGor5.CYUI01015914v1 C 0 I 1 s macFas5.chr3 33560160 4 + 192294377 ccca i macFas5.chr3 C 0 I 19 s calJac3.chr2 146598218 4 - 204313951 CCCT i calJac3.chr2 I 1 C 0 s aotNan1.NW_018514293v1 57068 4 + 376347 ccct i aotNan1.NW_018514293v1 I 1 C 0 e colAng1.NW_012117710v1 6354828 26162 - 6586416 T e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e rheMac8.chr3 151876020 26888 - 185818997 T e cebCap1.NW_016107703v1 443884 70 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=4494.000000 s hg38.chr7_KI270899v1_alt 77582 2 + 190869 gt s panTro5.chr7_NW_015973523v1_random 10941 2 - 29993 gt i panTro5.chr7_NW_015973523v1_random I 1 C 0 s panPan2.chrUn_NW_014023765v1 1932 2 + 9642 gt i panPan2.chrUn_NW_014023765v1 I 1 C 0 s gorGor5.CYUI01015914v1 38740 2 - 432965 gt i gorGor5.CYUI01015914v1 I 1 C 0 s macFas5.chr3 33560183 2 + 192294377 gc i macFas5.chr3 I 19 C 0 s colAng1.NW_012117710v1 232468 2 + 6586416 gt i colAng1.NW_012117710v1 I 407 C 0 s calJac3.chr2 146598222 2 - 204313951 GT i calJac3.chr2 C 0 C 0 s aotNan1.NW_018514293v1 57072 2 + 376347 gt i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cerAty1.NW_012002954v1 5005023 29577 + 21915920 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e rheMac8.chr3 151876020 26888 - 185818997 T e cebCap1.NW_016107703v1 443884 70 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=71832.000000 s hg38.chr7_KI270899v1_alt 77584 21 + 190869 gggtgtataggagagtgtgtc s panTro5.chr7_NW_015973523v1_random 10943 21 - 29993 gggtgtgtaggagagtgtgtc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1934 21 + 9642 gggtgtgtaggagagtgtgtc i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38742 21 - 432965 gggtgtgtaggagagtgtgtc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943853 21 + 185818997 gggtgtgtaggtgagtgtgtc i rheMac8.chr3 I 407 I 2 s macFas5.chr3 33560185 21 + 192294377 gggtgtgtaggtgagtgtgtc i macFas5.chr3 C 0 I 2 s cerAty1.NW_012002954v1 16911766 21 - 21915920 gggtgtgtaggtgagtgtgtc i cerAty1.NW_012002954v1 I 415 I 2 s colAng1.NW_012117710v1 232470 21 + 6586416 gggtgtgtaggtgagtgtgtc i colAng1.NW_012117710v1 C 0 I 2 s calJac3.chr2 146598224 21 - 204313951 GGACATGTAGGTGAGTGCATA i calJac3.chr2 C 0 C 0 s aotNan1.NW_018514293v1 57074 21 + 376347 gggcatgtaggtgagtgcata i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e chlSab2.chr28 21481499 26193 + 21531802 T e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e cebCap1.NW_016107703v1 443884 70 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=88348.000000 s hg38.chr7_KI270899v1_alt 77605 24 + 190869 tgtgtg----cg--tgtgcaaatatgtctg s panTro5.chr7_NW_015973523v1_random 10964 26 - 29993 tgtgtg----tgagtgtgcaaatatgtctg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1955 26 + 9642 tgtgtg----tgagtgtgcaaatatgtctg i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38763 26 - 432965 tgtgtg----tgagtgtgcaaatatgtctg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943876 24 + 185818997 --tgtg----tgagtttgcaggtatgtctg i rheMac8.chr3 I 2 C 0 s macFas5.chr3 33560208 24 + 192294377 --tgtg----tgagtttgcaggtatgtctg i macFas5.chr3 I 2 C 0 s cerAty1.NW_012002954v1 16911789 24 - 21915920 --tgtg----tgagtttgcaggtatgtctg i cerAty1.NW_012002954v1 I 2 C 0 s chlSab2.chr28 50990 24 - 21531802 --tgtg----tgagtttgcagatatgtctg i chlSab2.chr28 I 222 C 0 s colAng1.NW_012117710v1 232493 24 + 6586416 --tgtg----tgagtttgcaggtatgtctg i colAng1.NW_012117710v1 I 2 C 0 s calJac3.chr2 146598245 28 - 204313951 --TGTCAgtgtgtgtgtgcaaatatgtctg i calJac3.chr2 C 0 C 0 s aotNan1.NW_018514293v1 57095 24 + 376347 --tgtc----tgagtgtgcaaatgtatcta i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e macNem1.NW_012019910v1 5119945 0 + 9440265 I e cebCap1.NW_016107703v1 443884 70 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=11939.000000 s hg38.chr7_KI270899v1_alt 77629 4 + 190869 tgtt s panTro5.chr7_NW_015973523v1_random 10990 4 - 29993 tgtt i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1981 4 + 9642 tgtt i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38789 4 - 432965 tgtt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943900 2 + 185818997 --tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33560232 2 + 192294377 --tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4321249 4 - 9440265 tgtt i macNem1.NW_012019910v1 I 460 C 0 s cerAty1.NW_012002954v1 16911813 2 - 21915920 --tt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 51014 4 - 21531802 tgtt i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 232517 4 + 6586416 tgtg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146598273 4 - 204313951 tatc i calJac3.chr2 C 0 C 0 s aotNan1.NW_018514293v1 57119 4 + 376347 tatt i aotNan1.NW_018514293v1 C 0 I 13 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e cebCap1.NW_016107703v1 443884 70 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=23638.000000 s hg38.chr7_KI270899v1_alt 77633 6 + 190869 tgtact s panTro5.chr7_NW_015973523v1_random 10994 6 - 29993 tgtact i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1985 6 + 9642 tgtact i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38793 6 - 432965 tgtact i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943902 6 + 185818997 tgtgtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33560234 6 + 192294377 tgtgtt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4321253 6 - 9440265 tgtgtt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16911815 6 - 21915920 tgtgtt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 51018 6 - 21531802 tgtgtt i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 232521 6 + 6586416 tgtgtt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146598277 6 - 204313951 tgtatt i calJac3.chr2 C 0 C 0 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e aotNan1.NW_018514293v1 57123 13 + 376347 I e cebCap1.NW_016107703v1 443884 70 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=13158.000000 s hg38.chr7_KI270899v1_alt 77639 7 + 190869 gat------gtaa s panTro5.chr7_NW_015973523v1_random 11000 7 - 29993 gat------gtaa i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1991 7 + 9642 gat------gtaa i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38799 7 - 432965 gat------gtaa i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943908 7 + 185818997 gat------gtgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33560240 7 + 192294377 gat------gtgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4321259 7 - 9440265 gat------gtgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16911821 7 - 21915920 gat------gtgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 51024 7 - 21531802 gat------gtgt i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 232527 5 + 6586416 ga--------tgt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146598283 13 - 204313951 ggtgcgtgggtgt i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 443954 7 - 2125214 ggt------gtgt i cebCap1.NW_016107703v1 I 70 C 0 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e aotNan1.NW_018514293v1 57123 13 + 376347 I e nomLeu3.chr20 96740 0 + 85365473 C a score=526344.000000 s hg38.chr7_KI270899v1_alt 77646 102 + 190869 gtgtccatgagtgtgtgagtgcttctgtgtaggtgtgtggtgtgaatgcatgtctgtgtg--tgcctgtgtgtgtgtgtgtccatgagtgtgtgaatgtgtacc s panTro5.chr7_NW_015973523v1_random 11007 100 - 29993 gtgtccatgagtgtgtgagtgcttctgtgtaggtgtgtggtgtgaatgcatgtctgtgtg--tgcctgtgtgtgtgtgt--ccatgagtgtgtgaatgtgtatc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 1998 102 + 9642 gtgtccatgagtgtgtgagtgcttctgtgtaggtgtgtggtgtgaatgcatgtctgtgtg--tgcctgtgtgtgtgtgtgtccatgagtgtgtgaatgtgtatc i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38806 102 - 432965 gtgtccatgagtgtgtgagtgcttctgtgtagttgtgtggtgtgaatgcgtgtctgtgtg--tgcctgtgtgtgtgtgtgtccatgagtgtatgaatgtgtatc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33943915 102 + 185818997 gtgtccatgagtatgtgagtgcttctgcgtaggtgtgtggtgtgaatgtatgtctgtgtg--cctgtgtggatgtgggtgtccatgagtgtgtgaatgtgtgtc i rheMac8.chr3 C 0 I 30 s macFas5.chr3 33560247 102 + 192294377 gtgtccatgagtatgtgagtgcttctgcgtaggtgtgtggtgtgaatgtatgtctgtgtg--cctgtgtggatgtgggtgtccacgagtgtgtgaatgtgtgtc i macFas5.chr3 C 0 I 30 s macNem1.NW_012019910v1 4321266 102 - 9440265 gtgtccatgagtatgtgagtgcttctgcgtaggtgtgtggtgtgaatgtatgtctgtgtg--cctgtgtgggtgtgggtgtccatgagtgtgtgaatgtgtgtc i macNem1.NW_012019910v1 C 0 I 30 s cerAty1.NW_012002954v1 16911828 102 - 21915920 gtgtccatgagtatgtgagtgcttctgcgtaggtgtgtggtgtgaatgtatgtctgtgtg--cctgtgtgggtgtgggtgtccatgagtgtgtgaatgtgtgtc i cerAty1.NW_012002954v1 C 0 I 12 s chlSab2.chr28 51031 102 - 21531802 gtgtccatgagtatgtgagtgcttctgcataggtgtgtggtgtgaatgtatgcctgtgtg--cctgtgtgggtgtgggtgtccatgagtgtgtgaatgtgtgtc i chlSab2.chr28 C 0 I 12 s colAng1.NW_012117710v1 232532 98 + 6586416 gtgtccatgagtatgtgagtgcttctgcgtaggtgtgtggtgtgaatgt----ctgtgtg--cccgtgtgggtgtgggtgtccatgagtgtgtgagtgtgtgtc i colAng1.NW_012117710v1 C 0 I 10 s calJac3.chr2 146598296 101 - 204313951 gtgtccatgagtgtgtgagtgc--ttgtgtaggtgtgtgatgtgaatgtgcatctgtgtgtctgtctttgtgggtgtgtgtCCATGAGT-TGTGACTGTGCATC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 443961 95 - 2125214 gtgtccatgagcgtgtgagtgcctctgtgtaggtgtgtggtgtgaatgtgcatgtgtatg--------tgtgggtgtgtgtccatgagt-tgtgactgtgcatc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 57136 63 + 376347 gtgtccatgagtgtg-gagtgcttctgtgtaggtgtgtggggtgaatgtgcatctgtgtg----------------------catg------------------ i aotNan1.NW_018514293v1 I 13 C 0 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e manLeu1.NW_012101810v1 2440832 26742 + 2515279 T e nomLeu3.chr20 96740 0 + 85365473 C a score=5558821.000000 s hg38.chr7_KI270899v1_alt 77748 844 + 190869 ------------------tgtgtcagtgtgtgagtgtgtcaatatgggtgggtgtgtcctccgtgagtgtgtgcgtgagtgaatggtgtctgtgtgCAGGTCCTCACCATGGGCCGTGTCTCGAGCACATGTGCCCCTGCCTCGGTGGACCGCAC-GGCCGGCTGGGAGACACAGCCCAGGTGCAGGGCACTCCACCTTTCAGGGCAGGCCTTGCTCGCAGCAGGTTTTCTCCCAAATCTTTGTCTCTCATCTTATCT-GGGCGGAAGGTTTTACCAAT---GAGAAGCAGAAAGGCATTCTTTTCCTCCTTGCTGCCTGCTGACAAGAGGCA----------------GCCAGCCGACCACTTGAAAGGGAGCCGGTACAGTTAGGCTGGGAGGGAAACTTGGATCACAGCCTGGAGATGGTGCGGTGTCCAGCCACTCTGCCGGGAGCTGG-----GCACTGTGTCTGACACACCGTTGCTGCTGGCCACTTCTAGTATTATTATTTCTGCTCTTTCCTTTCCTTCATCATATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTGCCTGTCCTGGAAAGTTGTCTCAGAAGGCCCTGTCCCGGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTGAATGGTGGGGTGTGGTCCGCTTGGCTCTGAGCAGAGCGCCTCCATGACAACGCCACAGTGTGCAGGGAAATGGGGGTGGGTGTGGGGGAAGCTGGGGGGTACCCCCACTCCTACTACCTTGAGCTCAGACCACCCTCTGCAACTTCCCTGGGGA--CCCCCACGGCCACGGGCCCTGGTCCAGTGGTGGGCTCTGCTCAGCCCAAGGGCTTTTGGATTAGAGTGTTACCAGCTTCCTGAGCCCATCC s panTro5.chr7_NW_015973523v1_random 11107 844 - 29993 ------------------tgtgtcagtgtgtgagtgtgtcaatatgggtgggtgtgtcctccgtgagtgtgtgtgtgagtgaatggtgtctgtgtgCAGGTCCTCACCATGGGCCGTGTCTCGAGCACATGTGCCCCTGCCTCGGTGGACCACAC-GGCCTGCTGGGAGACACAGCCCAGGTGCAGGGCACTCCACCTTCCACGGCAGGCCTTGCTCTCAGCAGGTTTTCTCCCAAATCTTTGTCTCTGATCTTATCT-GGGCGGAAGGTTTTACCAAT---GAGAAGCAGAAAGGCATTCTTTTCCTCCTTGCTGCCTGCTGACAAGAGGCA----------------GCCAGCCGACCACTTGAAAGGGAGCCGGTACAGTCAGGCTGGGAGGGAAACTTGGATCACAGCCTGGAGATGGTGCAGTGTCCAGCCACTCTGCCGGGAGCTGG-----GCACTGTGTCTGACACACCGTTGCTGCTGGCCACTTCTAGTATTATTATTTCTGCTCTTTCCTTTCCTTCGTCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTGCCTGTCCTGGAAAGTTGCCTCAGAAGGCCCTGTCCCAGTGGAAATTGCTGGTGGCTCTGGGTGTCTGGGCCTGAATGGTGGGGTGTGGTCCGCTTTGCTCTGAGCAGAGCCCCTCCATGACAATGCCACAGTGTGCAGGGAAATGGGGGTGGGTGTGGGGGAAGCTGGGGGGTACCCCCACTCCTACTACCTTGAGCTCAGACCACCCTCTGCAACTTCCCTGGGGA--CCCCCACGGCCATGGGCCCTGGTCCAGTGGTGGGCTCTGCTCAGCCCAAGGGCTTTTGGATTAGAGTGTTACCAGCTTCCTGAGCCCATCC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 2100 844 + 9642 ------------------tgtgtcagtgtgtgagtgtgtcaatatgggtgggtgtgtcctccgtgagtgtgtgtgtgagtgaatggtgtctgtgtgCAGGTCCTCACCATGGGCCGTGTCTTGAGCACATGTGCCCCTGCCTCGGTGGACCGCAC-GGCCTGCTGGGAGACACAGCCCAGGTGCAGGGCACTCCACCTTCCAGGGCAGGCCTTGCTCTCAGCAGGTTTTCTCCCAAATCTTTGTCTCTGATCTTATCT-GGGCGGAAGGTTTTACCAAT---GAGAAGCAGAAAGGCATTCTTTTCCTCCTTGCTGCCTGCTGACAAGAGGCA----------------GCCAGCCGACCACTTGAAAGGGAGCCGGTACAGTCAGGCTGGGAGGGAAACTTGGATCACAGCCTGGAGATGGTGCGGTGTCCAGCCACTCTGCCGGGAGCTGG-----GCACTGTGTCTGACACACCGTTGCTGCTGGCCACTTCTAGTATTATTATTTCTGCTCTTTCCTTTCCTTCATCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTGCCTGTCCTGGAAAGTTGCCTCAGAAGGCCCTGTCCCAGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTGAATGGTGGGGTGTGGTCCGCTTTGCTCTGAGCAGAGCCCCTCCATGACAATGCCACAGTGTGCAGGGAAATGGGGGTGGGTGTGGGGGAAGCTGGGGGGTACCCCCACTCCTACTACCTTGAGCTCAGACCACCCTCTGCAACTTCCCTGGGGA--CCCCCACGGCCATGGGCCCTGGTCCAGTGGTGGGCTCTGCTCAGCCCAAGGGCTTTCGGATTAGAGTGTTACCAGCTTCCTGAGCCCATCC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 38908 842 - 432965 ------------------tgtgtcagtgtgtgagtgtgtcaatatgggtgggtgtgtcctccgtgagtgtgtgtgtgagtgaatggtgtctgtgtgCGGGTCCTCACCATGGGTGGTGTCTCGAGCACATGTGCCCCTGCCTCGGCGGACCGCAC-GGCCTGCTGGGAGACACAGCCCAGGTGCAGGGCACTCCACCTTCCAGGGCAGGCCTTGCTCTCAGCAGGTTTTCTCCCAAATCTTTGTCTCTGATCTTATCT-GGGCGGAAGGTTGTACTGAT---GAGAAGCAGAAAGGCGTTCTTTTCCTCCTTGCTGCCTGCTGACAAGAGGCA----------------GCCAGCCGATCACTTGAAAGGGAGCCGGTACAGTCAGGCTGGGAGGGAAACTTGGATCACAGCCTGGAGATGGTGCGGTGTCCAGCCACTCTGCTGGGAGCTGG-----GCACTGTGTCTGACACACCGTTGCTGCTGGCCACTTCTAGTATTATTATTTCTGCTCTTTCCTTTCCTTCATCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTGCCTGTCCTGGAAAGTTGTCTCAGAAGGCCCTGTCCCGGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTGAATGGTGGGGTGTGGTCTGCTTTGCTCTGAGCAGAGCCCCTCCATGACAATGCCACAGTGTGCAGGGAAATGGGGGTGGGTGTGGGGGAAGCTGGGGGGTACCCCCACTCCTACTACCTTGAGCTCAGACCACCCTCTGCAACTTCCCTGGGA----CCCCACGGCCATGGGCCCTGGTCCAGTGGTGGGCTCTGCTCAGCCCAAGGGCTTTTGGATCAGAGTGTTACCAGCTTCCTGAGCCCATCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33944047 859 + 185818997 ------------------tgtgtccatgtgtgagtgtgtcagtatgggtgggtgtgtcctctgtgaacatgtgtgggagtgaatggtgtctgtgGGAGGGTCGTCACCATGGGCCGTGTCTCGAGCACATGTGGCCCTGCCTCGGTGGACCCCACGGGCCTGCTGGGAGACACAGCCCAGGTGCAAGGCATTCCACCGTCCAGGGCAGGCCTTGCTCTCAGCAGGTTTTCTCCCAGATCTTTGTCTCTGACCTTACCTGGGGTGGAAGGTTTTACCCAA---GAGAAGCAGAAAGGCGTTCCTTTCCTCCTTGCTGCCCGCCAGCAAGAGGCACTCGTTGCTCGTGGCAGCCAGCCAACCACTTGAAAGGGAGCTGGTACAGTCAGGCT-GGGGGGAAACTTGGATTACAGCCTCGAGACGGTGCAGGGTCCAGTCACTCTGCCTGGAGCTAG-----GCACCGTGTCTGACGCACCGTTGCTGCTGGCCACTTCTAGGATTATTTTTTCCGCTCTTTCCTTTCCTTCATCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTCCCTGTCCTGGAAAGTCATCTCAGAAGGTCCTGTCCCAGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTAAACGGTGGGGTGTGGTCTGCTTTGCTCTGAGCAGAGCCCCTCCATGACAATGCCACAGCGTGCAGGGAAATGGGGGTGGGGGTGGGGGAAGCTGAGGGGTATCCCCACGCCTACTGCCTTGAGCTCAGACCGCTCTCTGCAACTTCTCTGGGGA--CCCCCACGGCCATGGGCCCTGGTCCAGT-GTGGGCTCTG-TCAGCCCAAGGGCTTCTGGATCAGAGTGTTACCAGCTTCCTGAGCCCATCC i rheMac8.chr3 I 30 C 0 s macFas5.chr3 33560379 859 + 192294377 ------------------tgtgtccatgtgtgagtgtgtcagtatgggtgggtgtgtcctctgtgaacatgtgtgggagtgaatggtgtctgtgGGAGGGTCGTCACCATGGGCCGTGTCTCGAGCACATGTGGCCCTGCCTCGGTGGACCCCACGGGCCTGCTGGGAGACACAGCCCAGGTGCAGGGCATTCCACCGTCCAGAGCAGGCCTTGCTCTCAGCAGGTTTTCTCCCAGATCTTTGTCTCTGACCTTACCTGGGGTGGAAGGTTTTACCCAA---GAGAAGCAGAAAGGCGTTCCTTTCCTCCTTGCTGCCCGCCAGCAAGAGGCACTCGTTGCTCGTGGCAGCCAGCCAACCACTTGAAAGGGAGCTGGTACAGTCGGGCT-GGGGGGAAACTTGGATTACAGCCTCGAGACGGTGCAGGGTCCAGTCACTCTGCCTGGAGCTAG-----GCACCGTGTCTGACGCACCGTTGCTGCTGGCCACTTCTAGGATTATTATTTCCGCTCTTTCCTTTCCTTCATCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTCCCTGTCCTGGAAAGTCATCTCAGAAGGTCCTGTCCCAGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTAAACGGTGGGGTGTGGTCTGCTTTGCTCTGAGCAGAGCCCCTCCATGACAATGCCACAGCGTGCAGGGAAATGGGAGTGGGGGTGGGGGAAGCTGAGGGGTATCCCCACGCCTACTGCCTTGAGCTCAGACCGCTCTCTGCAACTTCTCTGGGGA--CCCCCACGGCCATGGGCCCTGGTCCAGT-GTGGGCTCTG-TCAGCCCAAGGGCTTCTGGATCAGAGTGTTACCAGCTTCCTGAGCCCATCC i macFas5.chr3 I 30 C 0 s macNem1.NW_012019910v1 4321398 859 - 9440265 ------------------tgtgtccatgtgtgagtgtgtcagtatgggtgggtgtgtcctctgtgaacatgtgtgggagtgaatggtgtctgtgGGAGGGTCGTCACCATGGGCCGTGTCTCGAGCACATGTGGCCCTGCCTCGGTGGACCCCACGGGCCTGCTGGGAGACACAGCCCAGGTGCAGGGCATTCCACCGTCCAGGGCAGGCCTTGCTCTCAGCAGGTTTTCTCCCAGATCTTTGTCTCTGACCTTACCTGGGGTGGAAGGTTTTACCCAA---GAGAAGCAGAAAGGCGTTCCTTTCCTCCTTGCTGCCCGCCAGCAAGAGGCACTCGTTGCTTGTGGCAGCCAGCCGACCACTTGAAAGGGAGCTGGTACAGTCGGGCT-GGGGGGAAACTTGGATTACAGCCTTGAGACGGTGCAGGGTCCAGTCACTCTGCCTGGAGCTAG-----GCACCGTGTCTGACGCACCGTTGCTGCTGGCCACTTCTAGGATTATTATTTCCGCTCTTTCCTTTCCTTCATCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTCCCTGTCCCGGAAAGTCATCTCAGAAGGTCCTGTCCCAGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTAAACGGTGGGGTGTGGTCTGCTTTGCTCTGAGCAGAGCCCCTCCATGACAATGCCACAGCGTGCAGGGAAATGGGGGTGGGGGTGGGGGAAGCTGAGGGGTATCCCCACGCCTACTGCCTTGAGCTCAGACCGCTCTCTGCAACTTCTCTGGGGA--CCCCCATGGCCATGGGCCCTGGTCCAGT-GTGGGCTCTG-TCAGCCCAAGGGCTTCTGGATCAGAGTGTTACTAGCTTCCTGAGCCCATCC i macNem1.NW_012019910v1 I 30 C 0 s cerAty1.NW_012002954v1 16911942 860 - 21915920 ------------------tgtgtccatgtgtgagtgtgtcagtatgggtgggtgtgtcctctgtgaacatgtgtgggagtgaatggtgtctgtgGGAGGGTCGTCACCATGGGCCGTGTCTCGAGCACATGTGGCCCTGCCTCGGTGGACCCCACGGGCCTGCTGGGAGACACAGCCCAGGTGCAGGGCATTCCACCGTCCAGGGCAGGCCTTGCTCTCAGCAGGTTTTCTCCCAGATCTTTGTCTCTGACCTTACCTGGGGTGGAAGGTTTTACCCAT---GAGAAGCAGAAAGGCGTTCCTTTCCTCCTTGCTGCCCGCCAGCAAGAGGCACTCGTTGCTCGTGGCAGCCAGCCGACCACTTGAAAGGGAGCTGGTACAGTCGGGCTGGGGGGGAAACTTGGATTACAGCCTCGAGACGGTGCAGGGTCCGGTCACTCTCCCTGGAGCTAG-----GCACCGTGTCTGACGCACCGTTGCTGCTGGCCACTTCTAGGATTATTATTTCCACTCTTTCCTTTCCTTCATCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTGCCTGTCCTGGAAAGTCATCTCAGAAGGTCCTGTCCCAGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTAAACGGTGGGGTGTGGTCTGCTTTGCTCTGAGCAGAACTCCTCCATGACAATGCCATAGCGTGCAGGGAAATGGGGGTGGGGGTGGGGGAAGCTCAGGGGTATCCCCATGCCTACTGCCTTGAGCTCAGACCACTCTCTGCAACTTCTCTGGGGA--CCCCCACGGCCATGGGCCCTGGTCCAGT-GTGGGCTCTG-TCAGCCCAAGGGCTTCTGGATCAGAGTGTTACCAGCTTCCTGAGCCCATCC i cerAty1.NW_012002954v1 I 12 C 0 s chlSab2.chr28 51145 853 - 21531802 ------------------tgtgtccatgtgtgagtgtgtcagtatgagtgggtgtg---tctgtgaacatgtgt--gagtgaatggtgtctgtgGGAGGGTCCTCATCCTGGGCTGTGTCTCGAGCACATGTGGCCCTGCCTCGGTGGACCCCACGGGTCTGCTGGGAGACACAGCCCAGGTGCAGGGCATTCCACCGTCCAGGGCAGGCCTTACTCTCAGCAGGTTTTCTCCCAGATCTTTGTCTCTGACCTTACCTGGGGTGGAAGGTTT--ACCAT---GAGAAGCAGAAAGGCGTTCCCTTCCTCCTTGCTGCCCGCCGGCAAGAGGCACCCATTGCTCATGGCAGCCAGCCGACCACTTGAAAGGGAGCTGGTACGGTCGGGCGAGGGGGGAAACTTGGATTACAGCCTCGAGACGGTGTGGGGTCCAGTCACTCTGCCTGGAGCTGG-----GCACTGTGTCTGACGCACCGTTGCTGCTGGCCACTTCTAGGATTATTATTTCCGCTCTTTCCTTTCCTTCATCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTGCCTGTCCTGGAAAGTCGTCTCAGAAGGCCCTGTCCCAGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTGAACGGTGGGGTGTGGTCTGCTTTGCTCTGAGCAGAGCCCCTCCATGACGATGCCACAGTGTGCAGGGAAAAGGGGGTGGGGGTGGGAGAAGCTGAGGGGCATCCCCACGCCTACTGTCTTGAGCTCAGACCGCTCTCTGCAACTTCCCTGGGGA--CCCCCATGGCCATGGGCCCTGGTCCAGC-GTGGGCTCTG-TCAGCCCAAGGGCTTCTGGATCACAGTGTCACCAGCTTCCTGAGCCTATCC i chlSab2.chr28 I 12 C 0 s manLeu1.NW_012101810v1 75781 860 - 2515279 ------------------tgtgtccatgtgtgagtgtgtcagtatgggtgggtgtgtcctctgtgaacatgtgtgggagtgaatggtgtctgtgGGAGGGTCGTCACCATGGGCCGTGTCTCGAGCACATGTGGCCCTGCCTCGGTGGACCCCACGGGCCTGCTGGGAGACACAGCACAGGTGCAGGGCATTCCACCGTCCAGGGCAGGCCTTGCTCTCAGCAGGTTTTCTCCCAGATCTTTGTCTCTGACCTTACCTGGGGTGGAAGGTTTTACCCAT---GAGAAGCAGAAAGGCGTTCCTTTCCTCCTTGCTGCCCGCCAGCAAGAGGCACTCGTTGCTCGTGGCAGCCAGCCGACCACTTGAAAGGGAGCTGGTACAGTCGGGTTGAGGGGGAAACTTGGATTACAGCCTCGAGACGGTGCAGGGTCCAGTCACTCTGCCTGGAGCTAG-----GCACCGTGTCTGACGCACCGTTGCTGCTGGCCACTTCTAGGATTATTATTTCCGCTCTTTCCTTTCCTTCATCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTGCCTGTCCTGGAAAGTCATCTCAGAAGGTCCTGTCCCAGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTAAACGGTGGGGTGTGGTCTGCTTTGCTCTGAGCAAAACCCCTCCATGACAATGCCACAGCATGCAGGGAAATGGGGGTGGGGGTGGGGGAAGCTGAGGGGTATCCCCACACCTACTGCCTTGAGCTCAGACCGCTCTCTGCAACTTCTCTGGGGA--CCCCCACGGCCATGGGCCCTGGTCCAGT-GTGGGCTCTG-TCAGCCCAAGGGCTTCTGGATCAGAGTGTTACCAGCTTCCTGAGCCCATCC i manLeu1.NW_012101810v1 I 865 C 0 s colAng1.NW_012117710v1 232640 853 + 6586416 ------------------tgtgtgtccgtgtgagtgtgtcagtacgggtgggtgtgtcctctgtgggcgtgtgtgtgagtgaatggtgtctgtgGGAGGGTCCGCACCATGGGCCGTGTCTCCAGCACAGGTGGCCCTGCCTCGGTGGACCCCA-AGGCCTGCTGGGAGACACAGCCCAGGTGCAGGGTGTTCCCCCATCCGGGGCAGGCCTTGCTCTCAGCAGGTTTTCTACCAGATCTTTGTCTCTGACCTTACCTGGGGTGGAAGGTTTTGCCCAT---GAGAAGCAGAAAGG-GTTCCTTTCCTCCTTGCTG-CTGCCGACAGGAGGCACTCATTGCTCGTGGCGGCCAGCCGACCACTTGAAAAGGAGCTGGTACGGTCGGGCTGTGGGGGAGACTTGGATTACAGCCTCGAGACGGTGCAGAGTCCGGTCACTCTGCCTGGAGCTGG-----GCACTGTGTCTGATGCACCGTTGCTGCCGGCCACTTCTAGGATTATTATTTCCACTCTTTCCTTTCCTTCATCACATGCTCCTGGAAGGGGCTCAGAGGTGTCCCCACCTTGCCTGTCCTGGAAAGTCGTCTCAGCAGGTCCAGTCCCAGTGGAAAGTGCTGGTGGCTCTGGGTGTCTGGCCCTGAACGGTGGGGTGTGGTCTGCTTTGCTCTGAGCAGAG---CTCCACGACAATGCCACAGCATGCAGGGAAATGGGGGTGGGGGTGGGGGAGGCTGAGGGGCATCCCCACGCCTACTGCCTTGAGCTCAGACCACTCTCTGCAACTTCCCTGGGGA--CCCCCACGGCCATGGGCCCTGGTCCAGT-GTGGGCTCTG-TCAGCCCAAGGGCTTCTGGATCAGA-TATTACCAGCTTCCTGAACCCATCC i colAng1.NW_012117710v1 I 10 C 0 s calJac3.chr2 146598397 771 - 204313951 CGTGTCGGTGTG--GGTGTATGTCCATGAGT--GTGTGTCAGTATAGGTGGGTGCATCCTCCAAGAGC------ATGAGTGAATGGTGTCTGTGTGCGGGTCCTCATCATGGGCCATGTGTTGAGCACCTGTGCCCTTGCCTTGGTGGACCCCATGGGGCCGCTGGGAGACACAGCCCGGGTGCAGGGCATCCCAGCCCCCAGGGCAAGCTTTGCTCTCAGCACATTTTCTCCCAAATCTTTGTGTCTGATCTTATCTGGGGCTAAAGGTTTTGCCAGTGAGGAGAAGAAGAAAGGCATTTCTTTCCTTCTTGCTGCCTGCGGACAAGATGCACTCCTTGCTGATGGCAGCCAGCCCACCCCTTGAAAGGGAGCTGGC----------TGGGA----------------------------GTGCAGTGTCCAGCCACTCTGCCTGGC-CTGGAGCTTGCAC--TGTCTGACACACAGTTGCTGCTGCCCA---------------------------------------------CTCTTGGAAGGGGCTCAAAG-----------------GTCCTGGGAAGTTGTCTAGGAAGGCCCTGTCACAATGGGAAGTGCCAGTGGCTCTGGGTGTCTGGGCCTGAATGGTGGGGTGTGCTCTG-TTCGCTCTGAGAAGAGCCCCTCCACATCAATGCCACAGTGTGCAGGGAAATGGGGGTGGGCGTAGGGGAAGCTGGGGGGAACCCCCACTCTTACTGCCTTGAGCTCAGACCACCCTCTGCAGCTTCTCTGGGGA---CCCCACAGCCGTGGGTCCTGGTCCAGTGGAGGGTTCTGCTCAGCCCAAGGCCTTTTGGATCAG--TGTAACCAGCTTCCTAAGCCCATCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 444056 783 - 2125214 tgtgttggtgtgtaggtgtatgtccatgagc--atgtgtcagtatgggtgggtgtgtcctccatgagc--gtgtgtgagtgaatggtgtctgtgtACGGGTCCTCACCATGGGCCATGTCTTGAGAACCTGTGCCCTTGCCTCGGTGAACCCCGCAGGGCCACTGAGAGAGACAGCCTGGGTGCAGGGCATCCCAGCCTCCAGGGCAAGCCTTGCTCTCAGCACATTTTCTCCCAAATCTTTGTCTCTGATCTTATCTAGGGCCGAAGGTTTTGCCAGT---GAGAAGCAGAAAGGCATTCCTTTCCTCCTTGCTGCCTGCTGACAAGATGCACTCCTTGCTGATGGCAGCCAGCCCACCCCTTGAAAGGGAGCTGGCAAGGTCAGGTTGGGA----------------------------GTGCAGTGTCCAGCCACTCTGCCTGGAGCTGG-----GCAC--TGTCTGACACACAGTTGCTGCTGTCCT---------------------------------------------CTCTTGGAAGGGGCTCAGAG-----------------GTCCTGGGAAGTTGTCTAGGAAGGCCCTGTCACAATGGGAAGTGCCGGTGGCCCTGGGTGTCTGGGCCTGAATGGTGGGGTGTGCTCTG-TTTGCTCTGAACAGAGCCCCTCCACGTCAATGCCACAGTGTGCAGGGAAATGGGGGTGGGTGTAGGGGAAGCTGGGGGGCACCCCCACTCTTACTGCCTTGAGCTCAGACCACCCTCTGCAGCTTCCCTGGGAAGCCCCCCAGAGCCATGGGTCCTGGTCCAGTGGAGGGTTCTGCTCAGCACAAGGCCTTTTGGATCAG--TGTTACCAGCTTCCTGAGCCCATCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 57199 726 + 376347 --------------ggtgcgtgtccatgagt--gtgcgtcaccgtgggtgggtgtgtcctccatgagcgtgtgtgtgagtgAACGGCGTCTGTGTGCGGGTCCTCACCATGGACCGTGTCCCGAGCAGCTGTGCACCTGCCTTGGTGGACCCCGCGGGGCCCCTGGGAGACACAGCCCCGGTGCAGCGCATCCCAGCCTCCAGGGCGGGCCTTGCTCTCAGCACATTTTCTCCCAAATCTTTGTCTCTGATCTTATCTGGGGCCAAAGGTTTTGCCAGT---GAGAAGCAGAAAGGTATTCCTTTC---------------------------CTCCTTACTGATGGTAGCCAGCCCACCCCTTGAAAGGGAGCTGGCAAGGTCAGGCTGGGA----------------------------GCGCAGTGTCCAGCCACTCTGCCCGGAGCTGG-----GCAC--TGTCTGACACACGGTTGCTGCTGTCCA---------------------------------------------CTCTTGGAAGGGGCT--GAG-----------------GTCCTGGGAAGTTGTCTAGGAAGGCCCTGTCACAATGGGAAGTGCTGGTGGCTCTGGGTGTCTGGGCCTGAATGGTGGGGTGTGCTCTG-TTTGCTCTGAGCAGAGCCC----------------CAGTGTACAGGGAAATGGGGGTGGGCGTAGGGGAAGCTGGGGGGCACCCCCACTCTTACTGCCTCGAGCTCGGACCGCCCTCTGCAGCTTCGCTGGGAACCCCCGCCGAGTCGTGGGTCCTGGTCCAGTGGAGGGTTCTGCTCAGCCCAAGGCCTTTTGGATCAG--TGTTACCAGCTTCCTGAGCCCATCC i aotNan1.NW_018514293v1 C 0 I 39 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C a score=349871.000000 s hg38.chr7_KI270899v1_alt 78592 74 + 190869 CCACCGCCTGACCTCGGCCTTGGCCTCCTGAACTCATTCT--------------------CAGCCTCCTGAGCTCGTCC---------------------------------------TCAGCCCCCTGAGCC s panTro5.chr7_NW_015973523v1_random 11951 74 - 29993 CCACCGCCTGACCTCGGCCTTGGACTCCTGAACTCATTCT--------------------CAGCCTCCTGAGCTCGTCC---------------------------------------TCAGCCCCCTGAGCC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 2944 74 + 9642 CCACCGCCTGACCTCGGCCTTGGCCTCCTGAACTCATTCT--------------------CAGCCTCCTGAGCTCGTCC---------------------------------------TCAGCCCCCTGAGCC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 39750 74 - 432965 TCACCGCCTGACCTCGGCCTTGGCCTCCTGAACTCATTCT--------------------CAGCCTCCTGAACTCATTC---------------------------------------TCAGCCCCCTGAGCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33944906 74 + 185818997 TCACCTCCTGAGCTCGGCCTCAGCCTCGTGAGCTCCTCCC--------------------CAACCTCTCGAGCTTCTCC---------------------------------------CCAGCCTCCCGACCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561238 74 + 192294377 TCACCTCCTGAGCTCGGCCTCAGCCTCGTGAGCTCCTCCC--------------------CAACCTCTCGAGCTTCTCC---------------------------------------CCAGCCTCCCGACCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322257 74 - 9440265 TCACCTCCTGAGCTCGGCCTCAGCCTCGTGAGCTCCTCCC--------------------CAACCTCTCGAGCTTCTCC---------------------------------------CCAGCCTCCCGACCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16912802 74 - 21915920 TCACCTCCTGAGCTCGGCCTCGGCCTCGTGAGCTCCTCCC--------------------CAACCTCTCGAGCTTCTCC---------------------------------------CCAGCCTCCCGAGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 51998 113 - 21531802 TCACCTCCTGAACTTGGCCTCGGCCTCCTGAGCCAGTCCT--------------------CAGCCTCCTCAGCTTCTCTTCCACCTCCTGAGCCCATCCTCACCGCCTGGGTTCAGCCTCGGCCTCCTGAGCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76641 74 - 2515279 TCACCTCCTGAGCTCGGCCTCGGCCTCGTGAGCTCCTCCC--------------------CAACCTCTCGAGCTTCTCT---------------------------------------CCAGCCTCCTGAGCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 233493 74 + 6586416 TCACTGCCTGAGCTCGGCCTCGGCCTCCTGAGCTCATTCT--------------------CGGCCTCCTGAGCCCATCC---------------------------------------CCAGCCTTCTGAGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146599168 94 - 204313951 TTGTCTCTTGGGCTCAGATTCGGCCTCCTGAGCTCATCCCCACCCTCCCGAGCTCAGACTCAGCCTTCTGAGGTCATCC---------------------------------------TGAGCCTCCTGAGCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 444839 74 - 2125214 TTACCTCCTGAGCTCGGATTCTGCCTCCTGAGCTCATCCC--------------------CAGGCTTCTAAGTTTCTCC---------------------------------------TCAGCCTCCTGAGCC i cebCap1.NW_016107703v1 C 0 I 21 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e aotNan1.NW_018514293v1 57925 39 + 376347 I e nomLeu3.chr20 96740 0 + 85365473 C a score=117257.000000 s hg38.chr7_KI270899v1_alt 78666 27 + 190869 CATCCTCA--------------------TCCTCCTGAGCTCCTCCCC s panTro5.chr7_NW_015973523v1_random 12025 27 - 29993 CATCCTCA--------------------TCCTCCTGAGCTCCTCCCC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3018 27 + 9642 CATCCTCA--------------------TCCTCCTGAGCTCCTCCCC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 39824 27 - 432965 CAtcctca--------------------tcctcctgagctcctcccc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33944980 27 + 185818997 TCTCCTCA--------------------GCCTTCTGAGCTTCTCCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561312 27 + 192294377 TCTCCTCA--------------------GCCTTCTGAGCTTCTCCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322331 27 - 9440265 TCTCCTCA--------------------GCCTTCTGAGCTTCTCCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16912876 27 - 21915920 TCTCCTCA--------------------GCCTTCTGAGCTTCTCCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52111 27 - 21531802 CATTCTCA--------------------GCCTCCTGagctcctcccc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76715 27 - 2515279 TCTCCTCA--------------------GCCTTCTGAGCTTCTCCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 233567 27 + 6586416 AGTCCTCA--------------------TTCTCCCCAGTTCCTCTTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146599262 47 - 204313951 CATCCTCACCCTCTTGAGCTTGGACTTGGCCTCCTGAGCTCATCCCC i calJac3.chr2 C 0 I 460 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e aotNan1.NW_018514293v1 57925 39 + 376347 I e cebCap1.NW_016107703v1 444913 21 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=127136.000000 s hg38.chr7_KI270899v1_alt 78693 25 + 190869 AGCCTCCTGAGCTCCTCCTCAGCCC s panTro5.chr7_NW_015973523v1_random 12052 25 - 29993 AGCCTCCTGAGCTCCTCCTCAGCCC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3045 25 + 9642 AGCCTCCTGACCTCCTCCTCAGCCC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 39851 25 - 432965 agcctcctgagctcctcctcagccc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33945007 25 + 185818997 AGCCTCCTGAGCCCATCCCCAGCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561339 25 + 192294377 AGCCTCCTGAGCCCATCCCCAGCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322358 25 - 9440265 AGCCTCCTGAGCCCATCCCCAGCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16912903 25 - 21915920 AGCCTCCTGAGCCCATCCCCAGCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52138 25 - 21531802 aacctcccaagctcctccccaacct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76742 25 - 2515279 AGCCTCCTGAGCCCATCCCCAGCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 233594 25 + 6586416 AGTCTCCTGAGCCCGTCCCCAGCCC i colAng1.NW_012117710v1 C 0 I 28 s calJac3.chr2 146599769 25 - 204313951 AGCCTCCTGAGCTCCTCCCCACCCT i calJac3.chr2 I 460 C 0 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e aotNan1.NW_018514293v1 57925 39 + 376347 I e cebCap1.NW_016107703v1 444913 21 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=12435.000000 s hg38.chr7_KI270899v1_alt 78718 3 + 190869 CCT s panTro5.chr7_NW_015973523v1_random 12077 3 - 29993 CCT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3070 3 + 9642 CCT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 39876 3 - 432965 cct i gorGor5.CYUI01015914v1 C 0 I 198 s rheMac8.chr3 33945032 3 + 185818997 CCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561364 3 + 192294377 CCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322383 3 - 9440265 CCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16912928 3 - 21915920 CCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52163 3 - 21531802 ccc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76767 3 - 2515279 CCT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146599794 3 - 204313951 CCT i calJac3.chr2 C 0 C 0 e colAng1.NW_012117710v1 233619 28 + 6586416 I e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e aotNan1.NW_018514293v1 57925 39 + 376347 I e cebCap1.NW_016107703v1 444913 21 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=165733.000000 s hg38.chr7_KI270899v1_alt 78721 106 + 190869 GAGCCTGTCCCCGGCTTCCTGAGCTCCTCCCCAGCATCCAGAGCCTGTCCCCAGG---------------------CCCTGAGCCCATCCTCAATCTCCTGAGCTCTTCTTCAGCCTCCTGAGCGGG s panTro5.chr7_NW_015973523v1_random 12080 89 - 29993 GAGCCTGTCCCCGGCTTCCTGAGCTCCTCCCCAGCATCCAGAGCCTGTCCCCAGG---------------------CCCTGAGCCCATCCTCAATCTCCTGAGCTCTTCT----------------- i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3073 89 + 9642 GAGCCTGTCCCCGGCTTCCTGAGCTCCTCCCCAGCATCCAGATCCTGTCCCCAGG---------------------CCCTGAGCCCATCCTCAATCTCCTGAGCTCTTCT----------------- i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 40077 89 - 432965 GAGCCTGTCCCCGGCTTCCTGAGCTCCTCCCCAGCATCCAGAGCCTGTCCCCAGG---------------------CCCTGAGCCCATCCTCAATCTCCTGAGCTCTTCT----------------- i gorGor5.CYUI01015914v1 I 198 C 0 s rheMac8.chr3 33945035 70 + 185818997 GAGC--------------------TTCTCCCCAGCCTCCTGAGCCAGTCCTCATT--------------------CTCCCCAGTTCCTCTTCAGCCTCCTGAGCCCGTCC----------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561367 70 + 192294377 GAGC--------------------TTCTCCCCAGCCTCCTGAGCCAGTTCTCATT--------------------CTCCCCAGTTCCTCTTCAGCCTCCTGAGCCCGTCC----------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322386 70 - 9440265 GAGC--------------------TTCTCCCCAGCCTCCTGAGCCAGTCCTCATT--------------------CTCCCCAGTTCCTCTTCAGCCTCCTGAGCCCGTCC----------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16912931 70 - 21915920 GAAC--------------------TTCTCCCCAGCCTCCTGAGCCAGTCCTCATT--------------------CTCCCCAGTTCCTCTTCAGCCTCCTGAGCCCGTCC----------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52166 110 - 21531802 aagctcctccccaacctccCAAGCTTCTCCTCAGCCTCCCGAGCTTCTCCCCAGCCTCCTGAGCCAGTCCTCATTCTCCCCAGGTCCTCTTCAGCCTCCTGAACCGGTCC----------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76770 55 - 2515279 GAGCCAGTCCTCATTCTCCCTAGTTCCTCTTCAGCCTCCTGAGCCCGTCCCCAGC------------------------------------------------------------------------ i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146599797 106 - 204313951 GAGCCTGTCCTCAGCCTCCTGAACTCCTCCTCCACCTCCAGATCCCATCCTCACT-TTCTGAGCTTGGACTTGGCCTCCTGATCTCTTCCTCAGCCTCCTGAGCTTG-------------------- i calJac3.chr2 C 0 I 19 e colAng1.NW_012117710v1 233619 28 + 6586416 I e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e aotNan1.NW_018514293v1 57925 39 + 376347 I e cebCap1.NW_016107703v1 444913 21 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=41551.000000 s hg38.chr7_KI270899v1_alt 78827 20 + 190869 TCCTCAGCCTCCTGAGCGAG s panTro5.chr7_NW_015973523v1_random 12169 17 - 29993 ---TCAGCCTCCTGAGCGAG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3162 17 + 9642 ---TCAGCCTCCTGAGCGAG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 40166 17 - 432965 ---TCAGCCTCCTGAGCGAG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33945105 15 + 185818997 ---CCAGC--CCTAAGCCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561437 15 + 192294377 ---CCAGC--CCTAAGCCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322456 15 - 9440265 ---CCAGC--CCTAAGCCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16913001 15 - 21915920 ---CCAGC--CCTAAGCCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52276 15 - 21531802 ---CCAGC--CCTAAGCCCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76825 10 - 2515279 ----------CCTAAGCCCA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146599922 20 - 204313951 TCCTCAATCTCCTGAGCCTG i calJac3.chr2 I 19 C 0 s aotNan1.NW_018514293v1 57964 20 + 376347 TCCTCAGCCTCCTGAGCACG i aotNan1.NW_018514293v1 I 39 C 0 e colAng1.NW_012117710v1 233619 28 + 6586416 I e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e cebCap1.NW_016107703v1 444913 21 - 2125214 I e nomLeu3.chr20 96740 0 + 85365473 C a score=78336.000000 s hg38.chr7_KI270899v1_alt 78847 20 + 190869 TCCTCAGCCTCCCAAGCCTG s panTro5.chr7_NW_015973523v1_random 12186 20 - 29993 TCCTCAGCCTCCCAAGCCTG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3179 20 + 9642 TCCTCAGCCTCCCAAGCCTG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 40183 20 - 432965 TCCTCAGCCTCCCAAGCCTG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33945120 20 + 185818997 TCCTCATTCTCCTGCACTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561452 20 + 192294377 TCCTCATTCTCCTGCACTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322471 20 - 9440265 TTCTCATTCTCCTGCACTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16913016 20 - 21915920 TCCTCATTCTCCTGCACTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52291 20 - 21531802 TCCTCATTCTCCTGCGCTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76835 20 - 2515279 TCCTCATTCTCCTGCACTCT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146599942 20 - 204313951 TCCTCAGCTTCCTGAGCTCC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 444934 20 - 2125214 TCCTCAATCTCCTAAGCCTG i cebCap1.NW_016107703v1 I 21 C 0 s aotNan1.NW_018514293v1 57984 19 + 376347 TTCCCAGCC-CCCGAGCCCA i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 233619 28 + 6586416 I e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C a score=498892.000000 s hg38.chr7_KI270899v1_alt 78867 65 + 190869 TCCTCGGCCTTCTGAGCTCCTCCCTGCCCTCCTGACCTTGTTCCTGGCCTCCTAAGTTCATCTTA s panTro5.chr7_NW_015973523v1_random 12206 65 - 29993 TCCTCAGCCTTCTGAGCTCCTCCCTGCCCTCCTGACCTTGTTCCTGGCCTCCTAAGTTCATCTTA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3199 65 + 9642 TCCTCAGCCTTCTGAGCTCCTCCCTGCCCTCCTGACCTTGTTCCTGGCCTCCTAAGTTCATCTTA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 40203 65 - 432965 TCCTCAGCCTTCTGAGCTCCTCCCTGCCCTCCTGACCTTGTTCCTGGCCTCCTAAGTTCATCTTA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33945140 65 + 185818997 TCCTTGGCCTCCTGAGCTCCTCTCCACCGTCCTGACCTTGTTCCTGGCCTCCCAAGTTCATCTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561472 65 + 192294377 TCCTTGGCCTCCTGAGCTCCTCTCCACCGTCCTGACCTTGTTCCTGGCCTCCCAAGTTCATCTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322491 65 - 9440265 TCCTTGGCCTCCTGAGCTCCTCTCCACCGTCCTGACCTTGTTCCTGGCCTCCCAAGTTCATCTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16913036 65 - 21915920 TCCTTGGCCTCCTGAGCTCCCCTCCACCGTCCTGACCTTGTTCCTGGCCTCCCAAGTTCATCTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52311 65 - 21531802 TCCTCGGCCTCCTGAGCTCCTCTCCACCATCCTGACCTTGTTCCTGGCCTCCCAAGTTCATCTTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76855 65 - 2515279 TCCTTGGCCTCCTGAGCTCCTCTCCACCGTCCTGACCTTGTTCCTGGCCTCCCAAGTTCATCTTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 233647 65 + 6586416 TCCTTGGCCTCCTGAGCTCCTCTCCACCGTCCTGACCTTGTTCCTGGCCTCCCAAGTTCATCTTA i colAng1.NW_012117710v1 I 28 C 0 s calJac3.chr2 146599962 65 - 204313951 TCCTCAGCCTCCTGAGCTCCCCCCCACCATCCTGACCTTGTCCCTGGCCTCCTAAGTTTATCTTA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 444954 65 - 2125214 TCCTCAGCCTCCTGAGCTCCTCCCCACTGTCCTGACCTTGTCCCTGGCCTCCTAAGTTTATGTTA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 58003 65 + 376347 TCCTCAGCCTCCTGAGCTCCTCCCCACCGTCCTGACCTTGTCCCTGGGCTCCTAAGTTTATCTTA i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2178386 1465 - 8137123 I e canFam3.chr6 60990016 1401 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C a score=136981.000000 s hg38.chr7_KI270899v1_alt 78932 17 + 190869 GCTCAAGGAGAAGGTCT s panTro5.chr7_NW_015973523v1_random 12271 17 - 29993 GCTCAAGGAGAAGGTCT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3264 17 + 9642 GCTCAAGGAGAAGGTCT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 40268 17 - 432965 GCTCAAGGAGAAGGTCT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33945205 17 + 185818997 GCTCAAGGAAAAGCTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561537 17 + 192294377 GCTCAAGGAGAAGCTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322556 17 - 9440265 GCTCAAGGAGAAGCTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16913101 17 - 21915920 GCTCAAGGAGAAGGTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52376 17 - 21531802 GCTCAAGGAGAAGGTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76920 17 - 2515279 GCTCAAGGAGAAGGTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 233712 17 + 6586416 GCTCAAGGAGAAGGTCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146600027 17 - 204313951 GCTCAAGGATCAGGTCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 445019 17 - 2125214 GCTCAAGGAGCAGGTCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 58068 17 + 376347 GCTCAAGGAGCAGGTCT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2179851 15 - 8137123 GCTCAGGG--CAGGCCT i otoGar3.GL873611 I 1465 C 0 e canFam3.chr6 60990016 1401 - 77573801 I e nomLeu3.chr20 96740 0 + 85365473 C a score=1660688.000000 s hg38.chr7_KI270899v1_alt 78949 215 + 190869 TGGCTCCTCCTGCCTCCAGCAGCCCCTGGACTAGATGCCTAGTTTATCAGCAACCCAGATCTGAGCCTCCTATCTCAGACCCTGGACCATGGAGCTGTGGGCACCAGGGAAAGC------TCTGGGGCCTGCTTGGCTT-AGATAGGACCATCGGCCCCAGTGCTGAGCCTGGCTTAGGGCCACCCAGGGACGTGTGCTCTTCATCACTTCCTTCAAGCCAG s panTro5.chr7_NW_015973523v1_random 12288 215 - 29993 TGGCTCCTCCTGCCTCCAGCAGCCCCTGGACTAGATGCCTAGTTTATCAGCAACCCAGATCTGAGCCTCCTATGTCAGACCCTGGACCATGGAGCTGTGGGCACCAGGGAAAGC------TCTGGGGCCTGCTTGGCTT-AGATAGGACCATCGGCCCCAGTGCTGAGCCTGGCTTAGGGCCACCAAGGGACGTGTGCTCTTCATCACTTCCTTCAAGCCAG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3281 215 + 9642 TGGCTCCTCCTGCCTCCAGCAGCCCCTGGACTAGATGCCTAGTTTATCAGCAACCCAGATCTGAGCCTCCTATCTCAGACCCTGGACCATGGAGCTGTGGGCACCAGGGAAAGC------TCTGGGGCCTGCTTGGCTT-AGATAGGACCATCGGCCCCAGTGCTGAGCCTGGCTTAGGGCCACCCAGGGACGTGTGCTCTTCATCACTTCCTTCAAGCCAG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 40285 215 - 432965 TGGCTCCTCCTGTCTCCATCAGCCCCTGGACTAGATGCCTAGTTTATCAGCAACCCAGATCTGAGCCTCCTATCTCAGACCCTGGACCATGGAGCTGTGGGCACCAGGGAAAGC------TCTGGGGCCTGCTTGGCTT-AGATAGGACCATCAGCCCCAGTGCTGAGCCTGGCTTAGGGCCACCCAGGGACGTGTGCTCTTCATCACTTCCTTCAAGCCAG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33945222 212 + 185818997 CGG---CTCCTGCCTCCAGCAG-CCCTGGACTAGATGCCTGGTTTATCAGCAACCCAGATCTGAGCCTCCTATCTCAGACCCTGAACCACAGAGCTGTGGGTACCAGGGGAAGC------TCTGGGGCCTGCTTGGCTTAAGATAGGACCGTCGGCCCCAGTGCTAAGCCTGGCTTGGGGCCACCCAGGGGCGTGTGCCCTTCCTCACTTCCTTCAAGCCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561554 212 + 192294377 CGG---CTCCTGCCTCCAGCAG-CCCTGGACTAGATGCCTGGTTTATCAGCAACCCAGATCTGAGCCTCCTATCTCAGACCCTGAACCACAGAGCTGTGGGTACCAGGGGAAGC------TCTGGGGCCTGCTTGGCTTAAGATAGGACCGTCGGCCCCAGTGCTAAGCCTGGCTTGGGGCCACCCAGGGGCGTGTGCCCTTCCTCACTTCCTTCAAGCCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322573 212 - 9440265 CGG---CTCCTGCCTCCAGCAG-CCCTGGACTAGATGCCTGGTTTATCAGCAACCCAGATCTGAGCCTCCTATCTCAGACCCTGAACCACAGAGCTGTGGGTACCAGGGGAAGC------TCTGGGGCCTGCTTGGCTTAAGATAGGACCGTCGGCCCCAGTGCTAAGCCTGGCTTGGGGCCACCCAGGGGCGTGTGCCCTTCCTCACTTCCTTCAAGCCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16913118 212 - 21915920 CGG---CTCCTGCCTCCAGCAG-CCCTGGACTAGATGCCTGGTTTATCAGCAACCCAGATCTGAGCCTCCTATCTCAGACCCTGAACCACAGAGCTGTGGGTACCAGGGGAAGC------TCTGGAGCCTGCTTGGCTTAAGATAGGACCGTCGGCCCCAGTGCTAAGCCTGGCTTGGGGCCACCCAGGGGCGTGTGCCCTCCCTCACTTCCTTCAAGGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52393 212 - 21531802 CGG---CTCCTGCCTCCAGCAG-CCCTGGACTAGATGCCTGGTTTATCAGCAACCCAGATCTGAGCCTCCTATCTGAGACCCTGAACCACGGAGCTGTGGGTACCATGGGAAGC------TCTGGGGCCTGCTTGGCTTAAGATAGGACCGTCGGCCCCAGTGCTAAGCCTGGCTGGCGGCCACCCAGGGGCGTGTGCCCTTCCTCACTTCCTTCAAGCCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 76937 212 - 2515279 CGG---CTCCTGCCTCCAGCAG-CCCTGGACTAGATGCCTGGTTTATCAGCAACCCAGATCTGAGCCTCCTATCTCAGACCCTGAACCACAGAACTGTGGGTACCAGGGGAAGC------TCTGGGGCCTGCTTGGCTTAAGATAGGACGGTCGGCCCCAGTGCTAAGCCTGGCTTGGGGCCACCCAGGGGCGTGTGCCCTTCCTCACTTCCTTCAAGCCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 233729 207 + 6586416 CGG---CTCCTGCCTCCGGCAG-CCCTGGACTAGATGCCTGGTTTATCAGGACCCCACATCTGAGCCTCGTATCTCAGACCCTG-ACCACGGAGCTGTGGGTACCAGGGGAAGC------TCTGGGGCCTGCTTGGCTTAAGATAGGACCGTCGGCCTCAGTGCTAAGCCTG----GGGGCCACCCAGGGGCGTGTGCCCTTCCTCACTTCCTGCAAGCCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146600044 216 - 204313951 TGGCTCCTCCTGTCTCCAGCAGCTCCTGGACTAGATGACTGGTTTATCAGTAACCCAGATCTGAGCCTCCTATCTCACACCCTGGACCACAGAGCTGTGGGCACCCAGGAAAGC------TCTGGGGCCTGCTTGGCTTAAGGTAGAACCATGGGTCCAAGTGCTGAGCTTGGCTTGGGGCCACTTAGGGACATGTGCTTTTCATCACTTCCTTCAAACAAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 445036 216 - 2125214 TGGCTTCTCCTGCCTCCAGCAGCTCCTGGACTAGATGCCTGGTTTATCAGAAACCCGGTTCTGAGCCTCCTATCTCACACCCTGGACCACAGAGCTGTGGGCACTGGGGCAAGC------TCTCGGGCCTGCTTGGCTTAAGGTGGAACCATGGGTCCCAGTGCTGAGCTTAGCTTGGGGCCACTCAGGGATGTGTGCTCTTCATCACTTTCTTCAAGCAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 58085 216 + 376347 TGGCTTCTCCTGCCTCCAGCAGCTCCTGGACTAGATGCCTGGTTTATCAGTAACCCAGTTCTGAGCCTCCTATCTCACACCCTGGACCACAGAGCTGTGGGCACCGGGGAAAGC------CCTGGGGCCTGCTTGGCTTAAGGGGGAACCATGGGTCCTAGTGCTGAGCTTGGCTCGGGGCCACTCAGGGATGTGTGCTCTTCATCACTTCCTTCAAGCAAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2179866 212 - 8137123 GGGCTCCTCCTGACGCTGG-AGCCCTTGGATAGCCCTTCTGGGT------GAGCTTGGAGCTGAGCCTC-TGGCTCTGACCCTGAAACACGGAGCTGTGG--CCTAGGGAAAGCCTGGGGCCTTGGGCCTGCTGTGCTCAGGGTTGGACCTCTTGCCCCAGACCTGAGCCCAGACTTGAGGCACTCAGGGACATGTGCTGTCTACTGCTTCCTTCCAGCAAG i otoGar3.GL873611 C 0 I 111 s canFam3.chr6 60991417 180 - 77573801 TGGCTCCTCTGGGCTGCCCGAGCCCTCAGACTGGAGACCTGGTGAGTCAGTG---CAGCGCTGCTTCTCCTCC-------------CCAC-GAGCTGTGGACACCAGGGGAAGC------ATCGGGACC--CTTGGCCT-GGCTGGGTCAAGT-------GTGATCATCCAGGCCCTGAGCTA---------GGGCCCTCTCTGCCACTTCCCTCGGGCAAG i canFam3.chr6 I 1401 C 0 e nomLeu3.chr20 96740 0 + 85365473 C a score=834850.000000 s hg38.chr7_KI270899v1_alt 79164 106 + 190869 TATCGCAG-----TGTCAGGAAGACCCGCTCTGTCCTGGTCACA------GCGGTTCCCTCCTGCA-GGACCCTCAGAGCCACAGGGCAGCAGAGA---GACCTGAGCAGATG---GTC-----------CTGGT s panTro5.chr7_NW_015973523v1_random 12503 106 - 29993 TATCGCAG-----TGTCAGGAAGACCCGCTCTGTCCTGGTCACA------GCTGTTCCCTCCTGCA-GGACCCTCAGAGCCACAGGGCAGCAGAGA---GACCTGAGCAGATG---GTC-----------CTGGT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3496 106 + 9642 TATCGCAG-----TGTCAGGAAGACCCACTCTGTCCTGGTCACA------GCTGTTCCCTCCTGCA-GGACCCTCAGAGCCACAGGGCAGCAGAGA---GACCTGAGCAGATG---GTC-----------CTGGT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 40500 106 - 432965 TATCGCAG-----TGTCAGGAAGACCCGCTCTGTCCTGGTCACA------GCTGTTCCCTCCTGCA-GGACCCTCAGAGCCACAGGGCAGCAGAGA---GACCTGAGCAGGTG---GTC-----------CTGGT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33945434 106 + 185818997 CATCGCAG-----TGTCGGGAAGACCTGCTCTGTCCTGGTCATA------GCTGCCCCTTCCCGCA-GGACCCTCAGAGACACAGGGCAGCAGAGA---GACCTGAGCAGGTG---GTC-----------CTGGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561766 106 + 192294377 CATCGCAG-----TGTCGGGAAGACCTGCTCTGTCCTGGTCACA------GCTGCCCCTTCCCGCA-GGACCCTCAGAGACACAGGGCAGCAGAGA---GACCTGAGCAGGTG---GTC-----------CTGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322785 106 - 9440265 CATCGCAG-----TGTCGGGAAGACCTGCTCTGTCCTGGTCACA------GCTGCCCCTTCCCGCA-GGACCCTCAGAGACACAGGGCAGCAGAGA---GACCTGAGCAGGTG---GTC-----------CTGGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16913330 106 - 21915920 CATCGCAG-----TGTTGGGAAGACCTGCTCTGTCCTGGTCACA------GCTGCCCCCTCCCGCA-GGACCCTCAGAGACACAGGGCAGCAGAGA---GACCCGAGCGGGTG---GTC-----------CTGGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52605 106 - 21531802 CATCGCAG-----TGTCAGGAAGATCTGCTCTGTCCTGGCCACA------GCTGCCCCCTCCCCCA-GGACCCGCAGAGACACAGGGCAGCAGAGA---GACCTGAGCAGGTG---GTC-----------CTGGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 77149 106 - 2515279 CATCGCAG-----TGTTGGGAAGATCTGCTCTGTCCTGGTCACA------GCTGCCCCCTCCCGCA-GGACCCTCAGAGACACAGGGCAGCAGAGA---GACCTGAGCAGGTG---GTC-----------CTGGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 233936 106 + 6586416 CATCGCAG-----TGTCGGGAAGACCGGCTCTGTCCTGGTCACA------GCTGCCCCCTCCCGCA-GGACCCTCAGAGACACAGGGCAGCAGAGA---GACCTGAGCAGGTG---GTC-----------CTGGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146600260 112 - 204313951 CATCGCAG-----TGTCAGGAAGACCAGCTCTGTCCTGGTCACAGTCCCTGCTGCCCCCTCCTGCA-GGACCCTCACAGCCACAGGGCAGCAGAGA---GACCTGAGCAGGCG---GTC-----------CTAGT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 445252 112 - 2125214 CATAGCAG-----TGTCAGAAAAACGGGCTCTGTCCTGGTCACAGTCCCTGCTGCCCCCTCCTGCA-GGACCCTCAGAGCCACAGGGCAGCAGAGA---GAACTGAGCAGGTG---GTC-----------CTGGT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 58301 112 + 376347 CATAGCAG-----TGTCAGAAAGACCGGCTCTGTCCTGGTCACAGTCCCTGCTGCCCCCTCCTGCA-GGACCCTCAGAGCCACAGGGCAGCAGAGA---GACCTGGGCAGGCG---GCC-----------CTGGT i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 60991597 128 - 77573801 CAAGGCTGGACGCCACCGAGAAGGTCAGCTGGGTCCC-GCCAAA------GCCACCACCCTGTCCATGGACCCTCGGAGCTACAGGGCAGCAGAGAGGTGACCTGAGGAGGGGCCAGTCCCTGGGCGCCGCTGGC i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2180078 111 - 8137123 I e nomLeu3.chr20 96740 0 + 85365473 C a score=4949315.000000 s hg38.chr7_KI270899v1_alt 79270 587 + 190869 TCCACGGGGCTCCCCTATGTCACCCTGGACCCAGTAATTAGACTCTTCGGGTAGAAAGCTCCAAGGATCAG--------TGAGGTCTTGGGGGGT-AAAGAGGCGCACACAATGATTGCTTTATCTCCCTCAAATATGCAGAAAATGAACTC---------------CATCAGCACACA---CGGGCCGCAGGGCTTTGTGGGTCCCCAGGGCCCCCTCTGAATTAC-ACTTTTGTTTTCCTGTGGG-AGCA---------GCTTGTGCTCATTAGGGGAAGGCCAGGTGCCCGTTCATCT-------------------------------GGTCAGCCCCCAT----------GCAGCCTGTTGGAGCAATGGGCAGGTGGCCAGGAGTTTGCCCCAC--ATGTT---TCTTTCTGAGTCTTTTGTCCAGCTGAGAACTTTCTACTTGATCTGTGCAGGATATCTGAGCAAGGCTGACCACTGCCCAGGCCC-TGCATCTGGGCCCACAG-AG---------------------------------GCCCC---GAGCTCCA---CCCGTGGTGTCCCTTTTAGCTTAAAGCTGTGATCCCTCCCCTCTGCCATTGCTGGCAGATTTCCAGCCAAGGCCCAGACAAATTTCTATCAGGGGGTTTGAATGGGGTGTGCCTGGAGCAGAGTTTTGAGCAGGACCTGAGGAAG s panTro5.chr7_NW_015973523v1_random 12609 617 - 29993 TCCACGGGAATCCCCTATGTCACCCTGGACCCAGTAATTAGACTCTTCGGGTAGAAAGCTCCAAGGATCAG--------TGAGGTCTTGGGGGGT-AAAGAGGCGCACACAATGATTGCTTTATCTCCCTCAAATATGCAGAAAATGAACTC---------------CATCAGCATACA---CGGGCCGCAGGGCTTTGTGGGTCCCCAGGGCCCCCTCTGAATTAC-ACTTTTGCTTTCCTGTGGG-AGCA---------GCTTGTGCTCATTAGGGGAAGGCCAGGTGCCAGTTCATCT-------------------------------GGTCAGCCCCCAT----------GCAGCCTGTTGGAGCAATGGGCAGGTGGCCACGAGTTTGCCCCAC--GTGTT---TCTTTCTGAGTCTTCTGTCCAGCTGAGAACTTTCTACTTGATCTGTGCAGGATATCTGAGCAAGGCTGAGCACTGCCCAGGCCC-TGCATCTGGGCCCACAG-AGGCCTCGCTGC--CCCAGATGCCACATCCCCAGTGCCCC---GAGCTCCA---CCCGTGGTGTCCCTTTTAGCTTAAAGCTGTGAT-CCTTCCCTCTGCCATTGCTGGCAGATTTCCAGCCAAGGCCCAGACAAATTTCTATCAGGGGGTTTGAATGGGGTGTGCCTGGAGCAGAGTTTTGAGCAGGACCTGAGGAAG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 3602 618 + 9642 TCCACGGGGCTCCCCTATGTCACCCTGGACCCAGTAATTAGACTCTTCGGGTAGAAAGCTCCAAGGATCAG--------TGAGATCTTGGGGGGT-AAAGAGGCGCACACAATGATTGCTTTATCTCCCTCAAATATGCAGAAAATGAACTC---------------CATCAGCACACA---CGGGCCGCAGGGCTTTGTGGGTCCCCAGGGCCCCCTCTGAATTAC-ACTTTTGCTTTCCTGTGGG-AGCA---------GCTTGTGCTCATTAGGGGAAGGCCAGGTGCCAGTTCATCT-------------------------------GGTCAGCCCCCAT----------GCAGCCTGTTGGCGCAATGGGCAGGTGGCCACGAGTTGGCCCCAC--GTGTT---TCTTTCTGAGTCTTTTGTCCAGCTGAGAACTTTCTACTTGATCTGTGCAGGATATCTAAGCAAGGCTGACCACTGCCCAGGCCC-TGCATCTGGGCCCACAG-AGGCCTCGCTGC--CCCAGATGCCACATCCCCAGTGCCCC---GAGCTCCA---CCCGTGGTGTCCCTTTTAGCTTAAAGCTGTGATCCTTCCCCTCTGCCATTGCTGGCAGATTTCCAGCCAAGGCCCAGACAAATTTCTATCAGGGGGTTTGAATGGGGTGTGCCTGGAGCAGAGTTTTGAGCAGGACCTGAGGAAG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 40606 618 - 432965 TCCACGGGGCTCCCCTATGTCACCCTGGACCCAGTAATTAGACTCTTCGGGTAGAAAGCTCCAAGGATCAG--------TGAGGTCTTGGGCGGT-AAAGAGGCACACACAATGATGGCTTTATCTCCCTCAAATATGCGGAAAATGAACTC---------------CATCAGCACACA---TGGGCCGCAGGGCTTTGTGGGTCCCCAGGGCCCCCTCTGAATTAC-ACTTTTGCTTTCCTGTGGG-AGCA---------GCTTGTGCTCATTAGGGGAAGGCCAGGTGCCAGTTCATCT-------------------------------GGTCAGCCCCCAT----------GCAGCCTGTTGGAGCAATGGGCAGGTGGCCAGGAGTTTGCCCCAC--GTGTT---TCTTTCTGAGTCTTTTGTCCAGCTGAGAACTTTCTACTTGATCTGTGCAGGATATCTGAGCAAGGCTGACCACTGCCCAGGCCC-TGCATCTGGGCCCACAG-AGGCCTCGCTGC--CCCAGATGCCACATCCCCAGTGCCCT---GAGCTCCA---CCCGTGGTGTCCCTTTTAGCTTAAAGCTGTGATCCTTCCCCTCTGCCATTGCTGGCAGATTTCCAGCCAAGGCCCAGACAAATTTCTATCAGGGGGCTTGAATGGGGTGTGCCTGGAGCAGAGTTTTGGGCAGGACCTGAGGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 96740 617 + 85365473 TCCACGGGGCTCCCCTATGTCACCCTGGACCCAGTAATTAGACTCTTCGGGTGGAAAGTTCCAAGGATCAG--------TGAGGTCTTGGGGGGT-AAAGAGGTGAACACAATGATTGCTTTATCTCCCTCAAATATACAGAAAGTGAACTC---------------CATCAGCACACA---TGGGCCGCAGGGCTTTGTGGGATCCCAGGGCCCCCTCTGAATTGG-GCTTTTGCTTTCCTGTGGG-AGCA---------GCTTGTGCTCACTGGGGGAAGGCCAGGTGCCAGTTCATCT-------------------------------GGTCAGCCCCCAT----------GCAGCCTGTTGGAGCAATGGGCAGGTGGCCAGGAGTTTGCCCCAC--GTGTT---TCTTTCTGAGTCTATTGTCCAGCTGAGAACTTTCTACTTGATCTGTGCAGGATCTCTGAGCAAGGCTGACCACTGCCCAGGCCC-TGCATCTGGGCCCACAG-AGGCCTCGCTGC--CGCAGACGCCGCATCCCCAGTGCCCC---AAGCTCCA---CCCGTGGTGTCCCTTTTAGCTTAAAGCTGTGATCCTTCCCCTCTGCCATTGCTGGCAGATTTCCAGCCAAGGCCCAGACAAATTTCCATC-GGGGGCTTGAATGAGGCTTGCCTGGAGCAGAGATCTGAGCAGAACCTGAGGAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33945540 607 + 185818997 TCCACGGGGCTCCCC-ATGTCAACCTGGACCCAGTAATTAGACTCCTCAGGTGGAAAGCCCCAAGGATCAG--------TGAGGTCTCGCGGGGT-GAAGAGGTGAACACCATGATTGCCTTATCTCCCTCAAATACTCGGAGAGTGAACTC---------------CTTCAGCACACA---TGGGCTGCAGGGCTTTGTGGGCCCCCAGGG-CCCCTCTGAATTAG-GCTTTTGCTCTGCCGTGGGTAGCA---------GCTAGTGCTCAGTAGGGGAAGACCAGGTGCCAGTTCATCT-------------------------------GGTCAGTCCCTGT----------GCAGCCTGTTGGCGCAATGGGCAGGTGGCCAGGAGTTTG-CCCAC--GTGTT---TCTTTCTGAGTCTTTTGTCCAGCGGGGAATTT-CTACTTTATCTGTGCGGGGTCTCTGAGCAAGGCTGACCACGGCCCAGGCCC-TGAGTCTGGGCCCACAG-AGGCCTCGCTGC--CCCAGATGCCACATCTCCAGTGCCCT---GAGCTCCA---CCCCTGGTGTCCA-TTTAGCTGAAAGCTGTGATCCTTCCCCTCTGCCATTGCTGGCAGAATTCTGGCCAAGGCC----CACATTTCCAGC-AGGGGCTTGAATGAGGCTTGCCTGGAGC--AGTTTTGAGCAGGACCTGAGGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33561872 607 + 192294377 TCCACGGGGCTCCCC-ATGTCAACCTGGACCCAGTAATTAGACTCCTCAGGTGGAAAGCCCCAAGGATCAG--------TGTGGTCTCGCGGGGT-GAAGAGGTGAACACCATGATTGCCTTATCTCCCTCAAATACTCGGAGAGTGAACTC---------------CTTCAGCACACA---TGGGCTGCAGGGCTTTGTGGGCCCCCAGGG-CCCCTCTGAATTAG-GCTTTTGCTCTGCCGTGGGTAGCA---------GCTAGTGCTCAGTAGGGGAAGACCAGGTGCCAGTTCATCT-------------------------------GGTCAGTCCCTGT----------GCAGCCTGTTGGCGCAATGGGCAGGTGGCCAGGAGTTTG-CCCAC--GTGTT---TCTTTCTGAGTCTTTTGTCCAGCGGGGAATTT-CTACTTTATCTGTGCGGGGTCTCTGAGCAAGGCTGACCACGGCCCAGGCCC-TGAGTCTGGGCCCACAG-AGGCCTCGCTGC--CCCAGATGCCACATCTCCAGTGCCCT---GAGCTCCA---CCCCTGGTGTCCA-TTTAGCTGAAAGCTGTGATCCTTCCCCTCTGCCATTGCTGGCAGAATTCTGGCCAAGGCC----CACATTTCCAGC-AGGGGCTTGAATGAGGCTTGCCTGGAGC--AGTTTTGAGCAGGACCTGAGGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4322891 607 - 9440265 TCCACGGGGCTCCCC-ATGTCAACCTGGACCCAGTAATTAGACTCCTCAGGTGGAAAGCCCCAAGGATCAG--------TGAGGTCTCGCGGGGT-GAAGAGGTGAACACCATGATTGCCTTATCTCCCTCAAATACTCGGAGAGTGAACTC---------------CTTCAGCACACA---TGGGCTGCAGGGCTTTGTGGGCCCCCAGGG-CCCCTCTGAATTAG-GCTTTTGCTCTGCCGTGGGTAGCA---------GCTAGTGCTCAGTAGGGGAAGACCAGGTGCCAGTTCATCT-------------------------------GGTCAGTCCCTGT----------GCAGCCTGTTGGCGCAATGGGCAGGTGGCCAGGAGTTTG-CCCAC--GTGTT---TCTTTCTGAGTCTTTTGTCCAGCGGGGAATTT-CTACTTTATCTGTGCGGGGTCTCTGAGCAAGGCTGACCACGGCCCAGGCCC-TGAGTCTGGGCCCACAG-AGGCCTCGCTGC--CCCAGATGCCACATCTCCAGTGCCCT---GAGCTCCA---CCCCTGGTGTCCA-TTTAGCTGAAAGCTGTGatccttcccctctgccattgctggcagaattctggccaaggcc----cACATTTCCAGC-AGGGGCTTGAATGAGGCTTGCCTGGAGC--AGTTTTGAGCAGGACCTGAGGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16913436 607 - 21915920 TCCACGGGGCTCCCC-ATGTCAACCTGGACCCAGTAATTAGACTCCTCAGGTGGAAAGCCCCAAGGATCAG--------TGAGGTCTCGCGGGGT-GAAGAGGTGAACACCATGATTGCCTTATCTCCCTGAAATATTCGGAGAGTGAACTT---------------CTTCAGCACACA---TGGGCTGCAGGGCTTTGTGAGCCCCCAGGG-CCCCTCTGAATTAG-GCTTTTGCTCTGCCGCGGGTAGCA---------GCTAGTGCTCAGTAGGGGAAGACCAGGTGCCAGTTCATCT-------------------------------GGTCAGTCCCTGT----------GCAGCCTGTTGGCGCAATGGGCAGGTGGCCAGGAGTTTG-CGCAC--GTGTT---TCTTTCTGAGTCTTTTGTCCAGCGGGGAATTT-CTACTTTATCTGTGCGGGGTCTCTGAGCAAGGCTGACCACGGCCCAGGCCC-TGAGTCTGGGCCCACAG-AGGCCTCGCTGC--CCCAGATGCCACATCTCCAGTGCCCT---GGGCTCCA---CCCCTGGTGTCCA-TTTAGCTGAAAGCTGTGatccttcccctctgccattgctggcagaattctggccaaggcc----cACATTTCCAGC-AGGGGCTTGAATGAGGCTTGCCTGGAGC--AGTTTTGAGCAGGACCTGAGGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 52711 609 - 21531802 TCCACGGGGTGCCCC-ATGTCAACCTGGACCCAGTAATTAGACTCCTCAGGTGGAAAGCCCCAAGGATCAG--------TGAGGTCTCGCGGGGT-GAAGAGGCGAATACCATGACTCCCTTATCTCCCTCAAAAACTCGGAGAGTGAACTC---------------CTTCAGCACACA---TGGGCTGCAGGGCTTTGTGGGCCCCCAGGG-ACCCTCTGAATTAC-GCTTTTGCTCTGCCGTGGGGAGCA---------GCTCGTGCTCAGTA-GGGAAGGCCAGGTGCCCGTTTATCT-------------------------------GCTCAGTCCCCGT----------GCAGCCTGTTGGCGCAATGGGCAGGTGGCCAGGAGTTTGCCCCAC--GTGTT---TCTTTCTGAGTGTTTTGTCCAGCGGGGAATTT-CTACTTTATCTGTGCGGGGTCTCTAAGCAAGGCTGACCACTGCCCAGGCCC-TGAGTCTGGGCCCATAG-AGGCCTCGCTGC--CCCAGATGCCACATTCCCAGTGCCCC---GAGCTCCA---TCCGTGGTGTCCG-TTTAGCTGAAAGCTGTGATCCTTCCCCTCTGCCACTACTGGCAGAATTCTGGCCAAAGCC----CGCATTTCCAGC-AGGGGCTTGAATGAGGCTTGCCTGGAGCAGAGTTTTGAGCAGGACCTGAGGAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 77255 607 - 2515279 TCCACGGGGCTCCCC-ATGTCAACTTGGACCCAGTAATTAGACTCCTCAGGTGGAAAGCCCCAAGGATCAG--------TGAGGTCTCGCGGGGT-GAAGAGGTGAACACCATGATTGCCTTATCTCCCTCCAATACTCGGAGAGTGAACTC---------------CTTCAGCACACA---TGGGCTGCAGGGCTTTGTGGGCCCCCAGGG-ACCCTCTGAATTAG-GCTTTTGCTCTGCCGTGGGTAGCA---------GCTAGTGCTCAGTAGGGGAAGACCAGGTGCCAGTTCATCT-------------------------------GGTCAGTCCCTGT----------GCAGCCTGTTGGCGCAATGGGCAGATGGCCAGGAGTTTG-CCCAC--GTGTT---TCTTTCTGAGTCTTTTGTCCAGCGGGGAATTT-CTACTTTATCTGTGCGGGGTCTCTGAGCAAGGCTGACCACGGCCCAGACCC-TGAGTCTGGGCCCACAG-AGGCCTCGCTGC--CCCAGATGCCACATCTCCAGTGCCCT---GGGCTCCA---CCCCTGGTGTCCA-TTTAGCTGAAAGCTGTGATCCTTCCCCTCTGCCATTGCTGGCAGAATTCTGGCCAAGGCC----CACATTTCCAGC-AGGGGCTTGAATGAGGCTTGCCTGGAGC--AGTTTTGAGCAGGACCTGAGGAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 234042 626 + 6586416 TCCACGGGGCGCCCC-ATGTCAACCTGGACCCAGTAATTAGACTCCTCGAGTGGAAAGCCCCATGGACCAG--------TGAGGTCTCGCGGGGT-GAAGAGGCGAACACCATGATTGCCTTATCTCCCTCAGATACTCGGAGAGTGAATGCCTTCAGCACACATGGCTTCAGCACACA---TGGGCTGCAGGGCTTCGTGGGCCCCCAGGG-CCCCTCTGAATTGG-GCTTTTGCTCTGCCGTGGGGAGCA---------GCTCGTGCTCAGTA-GGGAAGGCCAGGCGCCCGTTCATCT-------------------------------GCTCAGTCCCCGT----------GCAGCCTGTTGGCGCAATGGGCAGGTGGCCAGGAGTTTGCCCCAC--GTGTT---TCTTTCTGAGTCTTTTGTCCAGCGGGGAACTTGCTACTTTATCTGTGCAGGATCTCTGAGCAAGGCTGACCACGGCCCGGGCCC-TGAGTCTGGGCCCACAG-AGGCCTCGCTGC--CCCAGATGCCACATCCCCAGTGCCCCGAGGAGCTCCA---CCCGTGGTGTCCG-TTTAGCTGAAAGCTGTGATCCTTCCCCTCTGCCACTGCCGGCAGAATTCTGGCCAAGGCC----TACATTTCCAGC-AGGGGCTTGAATGAGGCTTGCCTGGAGC--AGTTTTGAGCAGGACCTGAGGAAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146600372 625 - 204313951 CCCACAGGGCTCCCCTATGTCAACCTGGACCCAGTAATTAGACTCTTCAGGTGGAAAACCCCAAGGATCAC--------TGAGGTCTTGGGGGAT-AAAGAGGCAAACGCAATGATTGCTTTATCTCCCTGAAATATACAGAAAGTGAACTC---------------CATCAGCACACA---CAGGCCACA-GGTTTTGCAGGTCCCCAGGGGCCCCTTTGAATTAG-GC-TTTGCTTTGCTGTGGGGAGCAGCTTGTGCTGCTTGTGCTCATTAGGGGAAGGCCAAGTGCCAGTTCATT--------------------------------GGTTAGCCCCCCT----------GCAGCTTATTGGAGCAATGGGCAGGTGGTCAGGAGTTTGCCCCAC--GTGTT---TCTCTCTGAGTCTTCTGTCCCACTGAGAACTTTGTACTTGATCTGTGCAGGATCTCCGAGCAAGGCTGACCATGGCCCAGGCCC-TGAGTCTGGGCCCACAG-AGGCCTGGCCAC--CCCAGATGCTGCATCCCCAGGGCCCC---AAGTTCCA---CCTATGGTGTCCCTTTTAGCTTAAAGCTAGGATCCTTCCCCTCAGCTATTGTTGGCAGAATTCCAGCCAAGACCCAGACAAATTCCCAGCAAGAGGCTTGAGTGAGGCTTGCCTGGAACAGAGTTTTGAGTAGTGCCTGAGAAAG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 445364 612 - 2125214 CCCACAGGGCTCCCCTATGTCAACCTGGACCTAGTAATTAAACTCTTCAGGTGGAAAACCCCAAGGATCAG--------TGAGGTCTTGGGGGAT-AAAGAGGCAAACGCAATGATTGTTTTATCTCCCTGAAATATACAGAAAGTGAACTC---------------CATCAGCACACA---CGGGACGCA-GGCTTTGCGGGTCTCCAGGGGCCCCTCTGAATTAG-GC-TTTGCTTTGCTGTGGGGAGCA---------GCTTGTGCTCACTAGGGGAAGGCCAGGTGCCAGTTCATC--------------------------------GGTCAGCCCCCCT----------GCAGCTTATTGGAGCAATGGGCAGGTGGCCAGAAGTTTGCCCCAC--GTGCT---TCTTTCTGAGTCTTCTGTCCCACTGAGAATTTTCTACTTGATCTGTGCAGGATCTCTAAGCAAGGCTGACCACTGCCCAGGCCC-TGAGTCTGGGCCCAGAG-AGGCCTGGCCAC--CCCAGATGCTGTA-CCCCAGGG-CCC---GAGTTCCA---CCTATGGTGTCCCTTTTAGCTTAAAGCTGGGCTCCTTCCCCTCAGCTATTGCTGGCAGAATTCCGGCCAAGGCCCAGACAAATTCCCAGCAGGAGGCTTGAGTGAGGATTGCCTGGAAC--AGTTTTGAGCAGTACCTGAGGAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 58413 616 + 376347 CCCACAGGGCTCCCCTATGTCAACCTGGACCCAGTAATTAGACTCCTCAGGTGGAAAACCCCAAGGATCAG--------TGAGGTCTTGGGGGAT-AAAGAGGCGAACGCAATGATTGCTTTATCTCCCTGAAATATACAGAAAGTGAACTC---------------CATCAGCACACA---CGGGCCGCA-GGCTTTGCGGGTCCCCAGGGGCCCCTCTGAATCAG-GC-TTGGCTTCGCTGTGGGGAGCA---------GCTTGTGCTCATTAGGGGAAGGCCAGGTGCCAGTTCATC--------------------------------GGTCAGCCCCCCT----------GCAGCTTATTGGAGCGATGGGCAGGTGGCCAGGAGTTTGCCCCAC--GTGTT---TCTTTCTGAGTCTTCTGTCCCACTGAGAACTTCGTACTTGATCTGTGCAGGATCTCTGAGCAAGGCTGACCACTGCCCAGGCCC-GGAGTCTGGGCCCACAG-AGGCCTGGCCGC--CCCAGACGCTGCATCCCCAAGGCCCC---GAGTTCCA---CCTGTGGTGTCCCGTTTAGCTTAAAGCTGGGATCCTTCCCCTCTGCTATTGCTGGCAGGATTCCGGCCAAGGCCCAGACAAATTCCCAGCAGGAGGCTTGACTGAGGCTTGCCTGGAACAGAGTTTTGAGTAGTGCCTGAGGAGG i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 60991725 639 - 77573801 TCCACTGGGCTCTCC-ACATCAGCCTGGACCGAGGAATTAGATTCTTCCTACAAAAGCCTTGGGGGATTGGCTGGCACTTGATGTCTTGGGAGATAAAAGGGGCAAATGCTGCTAATTATTTGTTTTCCTCAAATA--CAGAGAATGAGACC---------------TACCCACACACAGAGTGGGCTGCAGAGCTT---ATGTCC-------CCCCACCAAGTAGGTGCTTCTATTTTGCTGTGGGGAGCA---------GGTTGGGCTCATCAGAGGGTGGCCAATCTCTGGCTCTGCTGACCTAAACCCTGGAGGGCTCTCAGGACCAGGGTCAGACCCCACCAACCCCACAACGGCCTGCGGGAGCAGTGGGCAGG-GGCCAGGGGTCTG-CTCACTGGTGTTACCTCCTTCTGAGCCCTCTGTCCACTCGAGAACTTTCCGTGTGTCTGATGCAGAATCCCACATCCCTTGGGGTTCTGACCCAGGCCCTTGTAGCCAGGCCCACGGCAGCCCGTGCTGCCTCCCAGAGGCCC---------TGTCCG---CTGCGCCAAGGCCCCTGAGGTCACCTTC--TTGGAGACTAG----------CACTTCCATTGCTGATGGAA-ACTGGCCACTGAC-------AAGTCCGGCAGGAGCCCAGACT--GGCTTTTTGGGAGCAGAAGTTTGCGTGGGAGCTGGTGAGG i canFam3.chr6 C 0 I 168 e otoGar3.GL873611 2180078 111 - 8137123 I a score=3600355.000000 s hg38.chr7_KI270899v1_alt 79857 451 + 190869 AACAGGGT-CCCCCACAACACGGGTGCTGGGAGATGCTTCCTCTAGGCTGCATCCTGATGGGGCCCCACTGGGGATGCTCCAGCCAGCGGGCACTTCAAAAGGTCCCTCCGCTGCTCTGCTGAGGACAGTGATGATTCCTCAGCGTGACCACTCAGGTCCTTCCTTTTCCCCAGTGCCCAGAGCCATGTGCTG-CCTGGGGATTCTGCTCTGTTACTTGGGACCCACCAGTGCCCATGGCAAGAGCTGCAGG--CTCAGTGCAGCATCGGCCTTGGGACCTCGAGGGAGTGCTCAGCCACCCACCAGGTGACC-CACCTGCCCCAGGGCCATCAGGCCACCAATGGTGGGGAGAGAAGGTGAC-------AGAGGATGCAGGTGGCTGTCTGGGCCGTGTCTGCCTGGGGTGTGGAAGATGTCAGGGAACACAGGCCCCAGTCGGATGGAGACTCAGCTCCTA s panTro5.chr7_NW_015973523v1_random 13226 451 - 29993 CACAGGGT-CCCCCACAACACGGGTGCTGGGAGGTGCTTCCTCTAGGCTGCATCCTGATGGGGCCCCAGTGGGGATGCTCCAGCCAGCGGGCACTTCAAAAGGTCCCTCTGCTGCTCTGCTGAGGACAGTGATGATTCCTCAGCGTGACCACTCAGGTCCTTCCTTTTCCCCAGTGCCCAGAGCCGTGTGCTG-CCTGGGGATTCTGCTCTGTTACTTGGGACCCACCAGTGCCCATGGCAAGAGCTGCAGG--CTCAGTGCAGCATCGGCCTTGGGACCTCGAGGGAGGGCTCAGCCACCCACCAGGTGACC-CACCTGCCCCAGGGCCATCAGGCCACCAATGGTGGGGAGAGAAGGTGAC-------AGAGGATGCAGGTGGCTGTCTGGGCCGTGTCTGCCTGGGGTGTGGGAGATGTCAGGGAACACAGGCCCCAGTCGGATGCAGACTCAGCTCCTA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 4220 451 + 9642 CACAGGGT-CCCCCACAACACAGCTGCTGGGAGATGCTTCCTCTAGGCTGCATCCTGATGGGGCCCCAATGGGGATGCTCCAGCCAGCGGGCACTTCAAAAGGTCCCTCCGCTGCTCTGCTGAGGACAGTGATGATTCCTCAGCGTGACCACTCAGGTCCTTCCTTTTCCCCAGTGCCCAGAGCCGTGTGCTG-CCTGGGGATTCTGCTCTGTTACTTGGGACCCACCAGTGCCCATGGCAAGAGCTGCAGG--CTCAGTGCAGCATCGGCCTTGGGACCTCGAGGGAGGGCTCAGCCACCCACCAGGTGACC-CACCTGCCCCAGGGCCATCAGGCCACCAATGGTGGGGAGAGAAGGTGAC-------AGAGGATGCAGGTGGCTGTCTGGGCCGTGTCTGCCTGGGGTGTGGGAGATGTCAGGGAACACAGGCCCCAGTCGGATGCAGACTCAGCTCCTA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 41224 447 - 432965 CACAGGGT-CCCCCACAACACGGGTGCTGGGAGATGCTTCCTCTAGGCCGCATCCTGATGGGATCCCACTGGGGATGCTCCAGCCA----GCACTTCAGAAGGTCCCTCCGCTGCTCTGCTGAGGAAAGTGATGATTCCTCAGCGTGACCACTCAGGTCCTTCCTTTTCCCCAGTGCCCAGAGCCGTGTGCTG-CCTGGGGATTCTGCTCTGTTACTTGGGACCCACCAGTGCCCATGGCAGGAGCTGCAGG--CTCAGTGCAGCATCGGCCTTGGGACCTCGAGGGAGTGCTCAGCCACCCACCAGGTGACC-CACCTGCCCCAGGGCCATCAGGCCACCAATGGTGGGGAGAGAAGGTGAC-------AGAGGATGCAGTTGGCTGTCTGGGCCGTGTCTGCCTGGGGTGTGGGAGATGTCAGGGAACACAGGCCCCAGTCGGATGCAGACTCAGCTCCTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 97357 448 + 85365473 CACAGGGTCCCCCCACAACACGGGTGCTGGGAGATGCTTCCTCTGGGCTGCATCCTGATGGGGCCCCACT-GGGATGCTCAGGCCAGCGGGCACTTCGAAAGGTCCCTCCGCTGCTCTGCTGAGGACAGTGATGATTCCTCAGAGTGACCACTCGGGTCCTTCCTTTTCCCCAGTGCCCAGAGCCATGTGCTG-CCTGGGGATTCTGCTCGGTTACTTGGGACCCACCAGTGCCCATGGCAGGAGCTGCAGG--CTCAGTGCAGCATGGGCCTTGGGACCTCGAGGGAGTGTTCAACCACCCATGAGGTGACC-CACCTTCCCCAGGGCCATCAGGCCACCAATGGTGGGGAG---AGGTGAC-------AGAGGATGCAGGTGGCTGTCTGGGCCGTGTCTGCCTGGGGTGTGGGAGATGTCAGGGAACACAGGCCCCAGTCGGATGCAGACTCCGCTCCTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33946147 444 + 185818997 CACAGGGC-CCCCCACAACACGGGTGCTGGGAGATGCTTCCTCTGGGCGGTGTCCTGATGGGGCCC---TGGGGATGCTCTGGCCAGCGGGCACTTCGGAAGGTCCCTCTGCTGCTCTGCTGAGGAC-GTGACGATTCCTCAGCGTGGCCACTCAGGTCCTTCCCTTTCTCCAGTGCCCAGAGCCGTGTGCTG-TCT-GGGATTCTGCTCTGTTACTTGGGAGCCACCAGTGCCCACGGCAGGAGCTGCAGG--CCCAGGGTAGCATGGGCCTTGGGACCTTGAGGAAGTGCTCAGTCACCCACAAGCTGACC-CACCTGTCCCAGGGCCATCAAGCCACCAACGGCGGGGAGAGAAGGTGAC---------AGGATGCAGGTGGCTGTCTGGGCCGTGTCTGCCTGGGGTGTAGGAGATGTCAGGGAACACAGGCCCCACTCGGACGCAGACTCAGCTCCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33562479 444 + 192294377 CACAGGGC-CACCCACAACACGGGTGCTGGGAGATGCTTCCTCTGGGCGGTGTCCTGATGGGGCCC---TGGGGATGCTCTGGCCAGCGGGCACTTCGGAAGGTCCCTCTGCTGCTCTGCTGAGGAC-GTGACGATTCCTCAGTGTGGCCACTCAGGTCCTTCCCTTTCTCCAGTGCCCAGAGCCGTGTGCTG-TCT-GGGATTCTGCTCTGTTACTTGGGAGCCACCAGTGCCCACGGCAGGAGCTGCAGG--CCCAGGGTAGCATGGGCCTTGGGACCTTGAGGAAGTGCTCAGTCACCCACAAGCTGACC-CACCTGTCCCAGGGCCATCAAGCCACCAACGGCGGGGAGAGAAGGTGAC---------AGGATGCAGGTGGCTGTCAGGGCCGTGTCTGCCTGGGGTGTAGGAGATGTCAGGGAACACAGGCCCCACTCGGACGCAGACTCAGCTCCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4323498 444 - 9440265 CACAGGGC-CCCCCACAACACGGGTGCTGGGAGATGCTTCCTCTGGGCGGTGTCCTGATGGGGCCC---TGGGGATGCTCTGGCCAGCGGGCACTTCGGAAGGTCCCTCTGCTGCTCTGCTGAGGAC-GTGATGATTCCTCAGCGTGGCCACTCAGGTCCTTCCCTTTCTCCAGTGCCCAGAGCCGTGTGCTG-TCT-GGGATTCTGCTCTGTTACTTGGGAGCCACCAGTGCCCACGGCAGGAGCTGCAGG--CCCAGGGTAGCATGGGCCTTGGGACCTTGAGGAAGTGCTCAGTCACCCACAAGCTGACC-CACCTGTCCCAGGGCCATCAAGCCACCAACGGCGGGGAGAGAAGGTGAC---------AGGATGCAGGTGGCTGTCTGGGCCGTGTCTGCCTGGGGTGTAGGAGATGTCAGGGAACACAGGCCCCACTCGGACGCAGACTCAGCTCCTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16914043 444 - 21915920 CACAGGGC-CCCCCACGACACGGGTGCCAGGAGATGCTTCCTCTGGGCAGTGTCCTGATGGGGCCC---TGGGGATGCTCTGGCCAGCGGGCACTTCGGAAGGTCCCTCTGCTGCTCTGCTGAGGAC-GTGACGATTCCTCAGCATGGCCACTCAGGTCCTTCCCTTTCTCCAGTGCCCAGAGCCATGTGCTG-CCT-GGGATTCTGCTCTGTTACTTGGGAGCCACCAGTGCCCACGGCAGGAGCTGCAGG--CCCAGGGTAGCATGGGCCTTGGGACCTTGAGGAAGTGCTCAGTCACCCACAAGCTGACC-CACCTGTCCCAGGGCCATCAAGCCACCAATGGCGGGGAGAGAAGGTGAC---------AGGATGCAGGTGGCTGTCTGGGCCGTGTCTGCTTGGGGTGTAGGAGATGTCAGGGAACACAGGCCCCACTCAGACGCAGACTCAGCTCCTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 53320 438 - 21531802 CACAGGGC-CCCCCACGACATGGGTGCTGGGAGATGCTTCCTCTGGGCTGCATCCTGATGGGGCCC---CGGGGATGCTCTGGCCAGC-GGCACTTCGGAAGGTCCCTCTGCTGCTCTGCTGAGGAC-GTGACGATTCCTCAGCATGGCCACTCAGGTGCTTCCCTTTCTCCAGTGCCCAGAGCCGTGTGCTG-CCT-GGGATTCTGCTCTGTTACTTGGGAGCCACCAGTGCCCACGGCAGGAGCTGCAGG--CCCAGGGCAGCATGGGCCTTGGGACTTTGAGGAAGTGCTCAGTCACCCACAAGCTGACC-CACCTGTCCCAGGGCCATCAAGCCACCAATGGCGGGG-----AGGTGAC---------AGGATGCAGGTGGCTGTCTGGGCCGTGTCTCCCTGGGGTGTGGGAGATGTCAGGGAACACAGGCCCCACTCGGACGCAGACTCAGGTCCTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 77862 444 - 2515279 CACAGGGC-CCCCCACGACACGGGTGCCGGGAGATGCTTCCTCTGGGCAGTGTCCTGATGGGGCCC---TGGGGATGCTCTGGCCAGCGGGCACTTCGGAAGGTCCCTCTGCTGCTCTGCTGAGGAC-GTGACGATTCCTCAGCATGGCCACTCAGGTCCTTCCCTTTCTCCAGTGCCCAGAGCCGTGTGCTG-CCT-GGGATTCTGCTCTGTTACTTGGGAGCCACCAGTGCCCACGGCAGGAGCTGCAGG--CCCAGGGTAGCATGGGCCTTGGGACCTTGAGGAAGTGCTCAGTCACCCACAAGCTGACC-CACCTGTCCCAGGGCCATCAAGCCACCAATGGCGGGGAGAGAAGGTGAC---------AGGATGCAGGTGGCTGTCTGGGCCGTGTCTGCCTGGGGTGTAGGAGATGTCAGGGAACACAGGCCCCACTCGGACGCAGACTCAGCTCCTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 234668 444 + 6586416 CTCAGGGC-CCCCCACGACACAGGTGCTGGTAGATGCTTCCTCCGGGCAGCATCCTGATGGGGCCC---TGGGGATGCTCCGGCCAGC-GGCACTTCGGAAGGTCCCTCTGCTGCTCTGCCGAGGACAGTGGCAATGCCTCAGCATGGCCACTCAGGTCCTTCCCTTTCTCCAGTGCCCAGGGCTGTGTGCTG-CCT-GGGATTCTGCTCTGTTACTTGGGAGCCACCAGTGCCCATGGCAGGAGCTGCAGG--CCCAGGGCAGCATGGGCCTTGGGACCTTGAGGAAGTGCTCAGTCACCCACAAGCTGACC-CACCTGTCCCAGGGCCACCAAGCCACCAATGGCGGGGAGAGAAGGTGAC---------AGGATGCAGGTGGCTGTCTGGGCCGTGTCAGCCTGGGGTGTGGGAGATGTCAGGGAACACAGGCCCCACTCGGACGCAGACTCAGCTCCTA i colAng1.NW_012117710v1 C 0 I 35 s calJac3.chr2 146600997 447 - 204313951 CACAGGGT-CCCCCAGGACAGGGGTGTGGGGAGACACTTCCTCTGGGCTGCATCCTGATGGGGCACCACTGGGGATACTCCAGCCAGCAGGCACTTCAAAAGGTCCCTCTGCT-CTCTGCTAAGGACAATGATGATTTCTTAATGTGACCACTCAGGTCCTTCCCTTTCCCCAGTGCCCAGAGCCATGTGCTG-CCTAGGGATTCCGCT--ATTACTTGGGACCCCCCAGTGGCCACATCAGGAGCTGCAGGCTCTCAGTGCAGCATGGGCCTTGGGACCCCGAGA-----------CACCCACAAGGTGACCTTACCTGCCCCAGGGCCTTCAAGCCACCAGTGGTGGAGAAAGAAGGTGGCTGGCGACAGAAGATGCAGGTGGCTGTCTGAGCTGTGTCTGCCTGGGGTGTGGGAGATGTCAGGGAACACATACCCCAATGGGACTCAGACTCAACTCCCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 445976 446 - 2125214 CACAGGGT-CCCCTAGGACAGGGGCGCTGGGAGACGCTTCCTCTGGGTTGCATCCTGATGGGGCACCACTGGGGATACTCCAGCCAGCGGGCACTTCAAAAGGTCCCTCTGCT-CTCTGTTAAGGACAATGATGATTTCTTAATGTGACCACTTAGGTCCTTCCCTTTCCCCAGTGCCCAGAGCCGTGTACTG-CCTAGGGATTCCACT--ATTACTTGGGACCCTCCAGTGGCCACATCAGGAGCTGCAGGCTCTCAGTGCAGCATGGGCCTTGGGACCCCGAGA-----------CACCCACAAGGTGACC-CACCTGCCCCAGGGCCTTCAAGCCACCAGTGGTGGGGAAAGAAGGTGGCTGGCGACAGAAGATGCAGGTGGCTGTCTGGGCTGTGTCTGCCTGGGGTGTGGGAGATGTCAGGGAACACGTGCCCCAATCGGACGCAGACTCAACTCCCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 59029 433 + 376347 CACAGGGA-CACCCAGGACAGGGGCGCGGGGAGATGCTTCCTCTGGGCTGCATCCTGATGGGGCACCACTGGGGATGCTCCAGCCAGCGGGCACTTCAGAAGGCCCCTCTGCTGCTCTGCTGAAGACAACGATGATTCCTCAATGTGACCACTCAGGTCCTTCCCTTTCCCCCGTGCCCAGAGCCGTGTGCTGCCCCAGGGATTCCGCT--GTTACTTGGGACCCCCCAGTGGCCACAGCAGGAGCTGCAGGCTCTCAGTGCAGCATGGGCCTTGGGACCCCGAGA-----------CACCCACAAGGTGACC-CACCTGCCCCAGGGCCTTCAAGCCACCAGTGATGGGGAAGGAAGGTGGCTGGTGACAGGAGATGCAGGTGGCTGT---------------CTGGGGTGTGGGAGATGTCAGGGAACACATGCCCCAATCGGACGCAGACTCAACTCCCA i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I a score=24428.000000 s hg38.chr7_KI270899v1_alt 80308 5 + 190869 GTTGC s panTro5.chr7_NW_015973523v1_random 13677 5 - 29993 GTTGC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 4671 5 + 9642 GTTGC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 41671 5 - 432965 GTTGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 97805 5 + 85365473 GCTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33946591 5 + 185818997 GACGC i rheMac8.chr3 C 0 I 30 s macFas5.chr3 33562923 5 + 192294377 GACGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4323942 5 - 9440265 GACGC i macNem1.NW_012019910v1 C 0 I 30 s cerAty1.NW_012002954v1 16914487 5 - 21915920 GATGC i cerAty1.NW_012002954v1 C 0 I 30 s chlSab2.chr28 53758 5 - 21531802 GATGT i chlSab2.chr28 C 0 I 30 s manLeu1.NW_012101810v1 78306 5 - 2515279 GATGC i manLeu1.NW_012101810v1 C 0 I 30 s calJac3.chr2 146601444 5 - 204313951 GTTGC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 446422 5 - 2125214 GTTGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 59462 5 + 376347 GTTGC i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 235112 35 + 6586416 I e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I a score=123055.000000 s hg38.chr7_KI270899v1_alt 80313 57 + 190869 TTTCGTGCTGATGGAGTGGTGGCCATGGACGGCACTGACACCCAGAACA-GGATGTGT s panTro5.chr7_NW_015973523v1_random 13682 57 - 29993 TTTCGTGCTGATGGAGTGGTGGCCATGGACGGCACTGACACCCAGAACA-GGATGTGT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 4676 57 + 9642 TTTCGTGCTGATGGAGTGATGGCCATGGACGGCACTGACACCCAGAACA-GGATGTGT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 41676 57 - 432965 TTTCGTGCTGATGGAGTGGTGGCCATGGACGGCACTGACACCCAGAACA-CGATGTGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 97810 57 + 85365473 TTTTGTGCTGATGGAGTGGTGACCATGGACGGCACTGACACCCAGCACA-GGACGTGT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33562928 30 + 192294377 ------------------GTGGC---------CGCTGTCCACCAGAGCCTCTCTGTG- i macFas5.chr3 C 0 C 0 s calJac3.chr2 146601449 57 - 204313951 TTTCGTTCTAATAGAGTGGTGGCCATGAACAGCTCTGACACCCAGAACA-GGACATGT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 446427 57 - 2125214 TTTCGTTCTGATGGAGTGGTGGCCATGGACAGCTCTGACACCCAGAACA-GGACATGT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 59467 57 + 376347 TTTCGTTCTGATGGAGTGGTGGCCATGGACAGCTCTGACACCCAGAACA-GGACATGT i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 235112 35 + 6586416 I e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I e chlSab2.chr28 53763 30 - 21531802 I e manLeu1.NW_012101810v1 78311 30 - 2515279 I e cerAty1.NW_012002954v1 16914492 30 - 21915920 I e macNem1.NW_012019910v1 4323947 30 - 9440265 I e rheMac8.chr3 33946596 30 + 185818997 I a score=2775139.000000 s hg38.chr7_KI270899v1_alt 80370 384 + 190869 GGCCC----------------------------GTGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGACCCCAGCATCTGAGCCCGCCTGTCGCTGGTGGGGGAGAGGGTACCGCAGGTGTCTAAC-GGGGGCAGAGGGTAGACAACAGCTCCCTCCAGAAGTCACTGCCCATCCAAGTCACGAAGCTTCCCATCAGTCCCCTGCTGCCATTATAACGGGCTTTgctcaaaacaatgccttcgccctctcccagctctggaggtgagcggtctggaacaggcctcactgggctaaaaccaaggtatcagccaggcctggcctcctggaggctccagcagcgtcccctgttccactcctagaggcccccacgttcAGCCAGTGTTCCTGGACCCTCCAGCGGCTGCCTTCCTAGTCACGTGGGCTcccc---ct-- s panTro5.chr7_NW_015973523v1_random 13739 384 - 29993 GGCCT-----------------------------TGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGACCCCAGCATCTGAGCCCGCCTGTCGCTGGTGGGGGAGAGGGTACCGCAGGTGTCTAAC-GGGGGCAGAGGGTAGACAACAGCTCCCTCCAGAAGTCACTGCCCATCCAAGTCACGAAGCTTCCCATCAGTCCCCTGCTGCCATTATAACGGGCATTgctcaaaacaatgccttcgccctctccgagctctggaggtgagcggtctggagcaggcctcactgggctaaaaccaaggtatcagccaggcctggcctcctggaggctccagctgcgtcccctgttccactcctagaggcccccacgttcAGCCAGTGTTCCTGGGCCCTCCAGCAGCTGCCTTCCTAGTCACGTGGGCTCCCC--ACT-- i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 4733 384 + 9642 GGCCT-----------------------------TGC---------------------------------------------------------------------------------------------------------------CTGGGGCACCCAGACCCCAGCATCTGAGCCCGCCTGTCGCTGGTGGGGGAGAGGGTACCGCAGGTGTCTAAC-GGGGGCAGAGGGTAGACAACAGCTCCCTCCAGAAGTCACTGCCCATCCAAGTCACGAAGCTGCCCATCAGTCCCCTGCTGCCATTATAACGGGCATTgctcaaaacaatgccttcgccctctcccagctctggaggtgagcggtctggaacaggcctcactgggctaaaaccaaggtatcagccaggcctggcctcctggaggctccagctgcgtcccctgttccactcctagaggcccccacgttcagccagtgttcctggaccctccagcggctgccttcctagtcacgtgggctcccc--act-- i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 41733 384 - 432965 GGCCT----------------------------GTGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGACCCCAGCATCTGAGCCCGCCTGTCACTGGTGGGGGAGAGGGTACCACAGGTGTCTAAC-GGGGGCAGAGGGTAGACAACAGCTCCCTCCAGAAGTCACTGCCCATCCAAGTCACGAAGCTTCCCatcagtcccctgctgccattgtaacgggcattgctcaaaacaatgccttcgccctctcccagctctggaggtgagcggtctggaacaggcctcactgggctaaaaccaaggtatcagccaggcctggcctcctggaggctccagcagcgtcccctgttccactcctagagacccccacgttcagccagtgttcctggaccctccagcggctgccttcctagtcacgtgggctcccc---ct-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 97867 382 + 85365473 GGCCGCTGTCCACCAGAGCCTGTCTGCGGAGCCGTGC---------------------------------------------------------------------------------------------------------------CTGAGGCACACAGACCCCAGCATCTGAG-CCGCCTGTTGCTGGTGGGGG------------------------------AGAGGGTAGACAACAGCTCCCTCCAGAAGTCACTGCCCATCCAAGTCACGAAGCTTCCCGTCAGTCCCCTGCTGCCATTGTAACCGGCATTgctcaaaacaatgccttcgccctctcccagctctggaggtgagcggtctggaacgggcctcactggactaaaaccaagctatcagccaggcctggccgcctgcaggctccagcagcgtcccctgttccactcctagaggcccccacgttcAGCGCGTGTTCCTGGACCCTCCAGCGGCTGCCTTCCTAGTCACGTGGGCTCCCT---CT-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33946626 379 + 185818997 GGCCC----------------------------GTGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGAGCCCAGCATGTGAGCCCACCTGTCGCTGGT---GGAGAGGGTACCGCAGGTGTCTAATGGGGGGCAGAGGGTGGATAATAGCTCCCTCCGGAAGTCACTGCCCGTCCAAGTCACGAAGCTT-CCGTCAGTCCCCTGCTGCCATTGTAACAGGCATTGTTCAAAGCAGTGCCTTTGCCCtctcccggctctggaggtgacacgtctgcaatgggcctcactgggctaaaacccaggtgtcagccaggccaggcctcctggaggctccggcagggtcctctggtccactcctagaggcccccgcattcagtgagcgttcctggaccctGCAGTGGCTGCCTTCCTAGTCACGTGGGCCCCCC------- i rheMac8.chr3 I 30 I 51 s macFas5.chr3 33562958 381 + 192294377 GGCCC----------------------------GTGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGAGCCCAGCATGTGAGCCCACCTGTCGCTGGT---GGAGAGGGTACCGCAGGTGTCTAATGGGGGGCAGAGGGTGGATAATAGCTCCCTCCGGAAGTCACTGCCCGTCCAAGTCACGAAGCTT-CCGTCAGTCCCCTGCTGCCATTGTAACAGGCATTGTTCAAAGCAGTGCCTTTGCCCtctcccggctctggaggtgacacatctgcaacgggcctcactgggctaaaacccaggtgtcagccaggccaggcctcctggaggctccggcagggtcccctggtccactcctagaggcccccgcattcagtgagcgttcctggaccctccAGTGGCTGCCTTCCTAGTCACGTGGGCCCCCCCT----- i macFas5.chr3 C 0 I 49 s macNem1.NW_012019910v1 4323977 350 - 9440265 GGCCC----------------------------GTGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGAGCCCAGCATGTGAGCCCACCTGTCGCTGGT---GGAGAGGGTACCGCAGGTGTCTAATGGGGGGCAGAGGGTGGATAATAGCTCCCTCCGGAAGTCACTGCCCGTCCAAGTCACGAAGCTT-CCGtcagtcccctgctgccattgtaacaggcattgttcaaagcagtgcctttgccctctcccggctctggaggtgacacgtctgcaacgggcctcactgggctaaaacccaggtgtcagccaggccaggcctcctggaggctccggcagggtcccctggtccactcctagaggcccccgcattcagtgagcgttcctggaccctccagt------------------------------------ i macNem1.NW_012019910v1 I 30 I 30 s cerAty1.NW_012002954v1 16914522 379 - 21915920 GGCCC----------------------------GTGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGAGCCCAGCATGTGAGCCCACCTGTCGCTGGA---GGAGAGGGTACTGCAGGTGTCTAATGGGGGGCAGAGGGTGGATAATAGCTCCCTCCGGAAGTCACTGCCCGTCCAAGTCACGAAGCTT-CCGtcagtcccctgctgccattgtaacaggcattgctcaaagcagtgcctttgccctctcccggctctggaggtgacacgtctgcaacgggcctcactgggctaaaacccaggtgtcagccaggccaggcctcctggaggctccggcagggtcccctggtccactcctagaggcccccgcattcagtgagcattcctggaccctccagtggctgccttcctagtcacgtgggcccccc------- i cerAty1.NW_012002954v1 I 30 I 51 s chlSab2.chr28 53793 372 - 21531802 GGCCC----------------------------GTGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGAGCCCAGCATGTGAGCCTGCCTGTCCCTGGT---GGAGAGGGTACCGCAGGTGTCTAAT-GGGGGCAGAGGGTGGATAATAGCTCCCTCCTGAAGTCACTGCCCGTCCAAGTCACGAAGCTT-CCGtcagtcccctgttgccattgtaacaggcattgctcgaaataatgcctttgccctctcctggctctggaggggacacgtctgcaacgggcctcgctgggctaaaacccaggggtcagccaggccaggccacctggaggctctggcagggtcccatggtccactcctagaggtccccgcgttcagtgagtgttcctggaccctccAGCGGCTGCCTTCCTAGTCACGTGGG------------- i chlSab2.chr28 I 30 I 6 s manLeu1.NW_012101810v1 78341 379 - 2515279 GGCCC----------------------------GTGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGAGCCCAGCATGTGAGCCCACCTGTCGCTGGT---GGAGAGGGTACTGCAGGTGTCTAATGGGGGGCAGAGGGTGGATAATAGCTCCCTCCGGAAGTCACTGCCCGTCCAAGTCACGAAGCTT-CCGTCAGTCCCCTGCTGCCATTGTAACAGGCATTGCTCAAAGCAGTGCCTTTGCCCtctcccggctctggaggtgacacgtctgcaacgggcctcactgggctaaaacccaggtgtcagccaggccaggcctcctggaggctccggcagggtcccctggtccactcctagaggcccccgcattcagtgagcgttcctggaccctccagtggctgccttcctagtcacgtggggccccc------- i manLeu1.NW_012101810v1 I 30 I 51 s colAng1.NW_012117710v1 235147 378 + 6586416 GGCCC----------------------------GTGC---------------------------------------------------------------------------------------------------------------CTGGGGCACACAGAGCCCAGCATGTGAGCCCGCCTGTTGCTGGT---GGAGAGGGTACCGCAGGTGTCTAAT-GGGGGCAGAGGGTGGATAATAGCTCCCTCCAGAAGTCACTGCCCGTCCAAGTCACGAAGCTT-CGGTCAGTCCCCTGCTGCCATTGTAACAGGCATTGCTCGAAACAATGCCTTAGCCCTCTCCTGgctctggaggtgacacgtctgcaatgggcctcactgggctaaaacccaggtgtcagccaggccaggcctcctggaggctccagcagggtcccctggtccactcctagaggaccccgcgttcagtgagtgttcctggaccctccAGGGGCTGCCTTCCCAGTCACGTGGGCCCCCT------- i colAng1.NW_012117710v1 I 35 I 109 s calJac3.chr2 146601506 472 - 204313951 GGCCA----------------------------CTACATGCCTGGTTTATCAGTAACCCAGATCTGAGCCTCCTATCTCACACCCTGGACCACAGAGCTGTGGGCACCCGGGAAAGCTCTAGGGCCTGGTTTATCTATCTAAGCCTCTCTGTGG-----AGACCCCAGCATCTGAGCCCGTCTGTCGCTGGTGGGGGAGAGGGTACCGCAGGTGTCTAAC-GGAGGCAGAGGATAGACAATG----------GAACTCACTACCCATCCAAGTCACAAAGCTT-CCATCAGCCCCCTACTGCAATTGTAACAGGCATTGCCCAAAACAA-------GCTCtctcacagctctggaggggagaggtctggagtgtgcctcactgggctaaaaccaaggtgtcagacaggctgggcctcctggaggctccaacagagacccctgttccactcctagaggcccccacgtccAGCGAGTTTTCCTGGACCCTTCAGCCGCTGCCTTCCTAGTCACATGGGCTCCCC-----CT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 446484 382 - 2125214 GGCCA----------------------------CTGC-------------------------------------------------------------------------------------------------CTACCCCAGCCTCTCTGTGG-----AGACCCCAGCATCTGAGGCCCTCTGTCGCTGGTGGGGGAGAAGGTACCGCAGGTGTCTAAC-GGAGGCAGAGGATAGACAATA----------GAACTCACTATCCATCCAAGTCACAAAGCTT-CCATCAGCCACCTGCTGCAATTGTAACAGGCATTgcccaaaacaagccctttgctctctcacagctctggaggtgagaggtctggaacgggcctcactgggctaaaaccaaggtgtcagacaggctgggcctcctggaggcactagcagagacccctgttccactcctagaggcccccacattcAGCGAGTTTTCCTGGACCCTCCAGCCGCTGCCTTTCTAGTCACGTGGGCTCCCC-----CT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 59524 382 + 376347 GGCCA----------------------------CTGT-------------------------------------------------------------------------------------------------CTACACAAGCCTCTCTGTGG-----AGACCGCAGCATCTGAGCCCCTCTGTCGCTGGTGGGGGAGAGGGTACCGCAGGTGTCTAAT-GGAGGCAGAGGATAGACAATA----------GAACTCACTACCCATCCGAGTCACAAAGCTT-CCATCAGCCCCCTGCTGCAATTGTAACAGGCgttgcccaaaacaagcccttcgctctctcacagctctggaggtgagaggtctggaacaggcctcgctgggctaaaaccaaggtgtcagacaggctgggcctcctggaggctccggcagagaCCCACGTTCCACTCCTAGAGGCCCGCACATCCAGCGAGTTGTCCTGGACCCTCCAGCCGCTGCCTTCCTAGTCATGTGGGCTCCCC-----CT i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I a score=354542.000000 s hg38.chr7_KI270899v1_alt 80754 45 + 190869 gccgtcagatccctctcgggacatgtcattgccccggcctcactc s panTro5.chr7_NW_015973523v1_random 14123 45 - 29993 GCAGTCAGATCCCTCTCGGGACACGTCATTGCCCCAGCCTCACTC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5117 45 + 9642 gcagtcagatccctcttgggacacgtcattgccccggcctcactc i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42117 31 - 432965 gcagtcagatccctctcgggacacg--------------tcactc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98249 45 + 85365473 GCAGTCAGAtccctcttaggacacatcattgcccgggcctcactc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947056 45 + 185818997 GCAGTCAGATCCCTCTCGGGACAGGTCATTGCCTGGGCCTCACTC i rheMac8.chr3 I 51 C 0 s macFas5.chr3 33563388 45 + 192294377 GCAGTCAGATCCCTCTCGGGACAGGTCATTGCCTGGGCCTCACTC i macFas5.chr3 I 49 C 0 s macNem1.NW_012019910v1 4324357 45 - 9440265 gcagttagatccctctcgggacaggtcattgcctgggcctcactc i macNem1.NW_012019910v1 I 30 C 0 s cerAty1.NW_012002954v1 16914952 45 - 21915920 gcagtcagatccctctcgggacaggtcattgcctgggcctcactc i cerAty1.NW_012002954v1 I 51 C 0 s chlSab2.chr28 54171 45 - 21531802 GCAGTCAGATCCCTCTCGGGACAGGTCATTGCCTGGGCCTCACTC i chlSab2.chr28 I 6 C 0 s manLeu1.NW_012101810v1 78771 45 - 2515279 gcagtcagatccctctcgggacaggtcattgcctgggcctcactc i manLeu1.NW_012101810v1 I 51 C 0 s colAng1.NW_012117710v1 235634 45 + 6586416 GCCGTCAGATCCCTCTCAGGACAGGTCACTGCCCAGGCCTCACTC i colAng1.NW_012117710v1 I 109 C 0 s calJac3.chr2 146601978 45 - 204313951 GCAGTCAGATCCCTCTCAGGACACGTCATTGCCCTGGGTTCACTC i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 446866 45 - 2125214 GCAGTCAGATCCCTCTCAGGACACATCATTGTCCTGGGCTTACTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 59906 45 + 376347 GCAGTCAGATCCCTCTCAGGACACGTCACTGCCCTGGGCTCACTC i aotNan1.NW_018514293v1 C 0 I 1054 e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I a score=253170.000000 s hg38.chr7_KI270899v1_alt 80799 36 + 190869 aatactgcaggatgctctccccatccccaagccctt s panTro5.chr7_NW_015973523v1_random 14168 36 - 29993 AATACTGCAGGATGCTCTCCCCATCCCCAAGCCCTT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5162 36 + 9642 aatactgcaggatgctctccccatccccaagccctt i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42148 36 - 432965 aatactgcaggatgctctccccatccccaagccctt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98294 36 + 85365473 aatactgcaggacgctctccccatccccaagccctt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947101 36 + 185818997 AATCCTGCAGGACGCTCTCCCCATCCCCAAGCCCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33563433 36 + 192294377 AATCCTGCAGGACGCTCTCCCCATCCCCAAGCCCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4324402 36 - 9440265 aatcctgcaggacgctctccccatccccaagccctt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16914997 36 - 21915920 aatcctgcaggacgctctccccatccccaagccctt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 54216 36 - 21531802 AATCCTGCAGGACGCTCTCCCCATCCCCAAGCCCTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 78816 36 - 2515279 aatcctgcaggacgctctccccatccccaagccctt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 235679 36 + 6586416 AATTCTGCAGGACGCTCTCCCCATCCCCAAGCCCTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602023 28 - 204313951 CACATTGCAGGACA--------ATCCCCAAGCCCTT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 446911 28 - 2125214 CACACTGCAGGACG--------ATCCCCAAGCCCTT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I e aotNan1.NW_018514293v1 59951 1054 + 376347 I a score=1490890.000000 s hg38.chr7_KI270899v1_alt 80835 176 + 190869 aatttatccacatctgcacagatcccaaggattctgatgtggacatctccagggccatcaacctcctaccacaGCATTCCCTGGCCTCAAGGGCGGACCAGCTCAGCATTGGAAACGCCAGGGTCCGGGCCGGCCTCATGGCCTCCAGGCACCCTCTCCCATCCACTCTCCATCA-G s panTro5.chr7_NW_015973523v1_random 14204 176 - 29993 AATTTATCCACATCTGCACAGATCCCAAGGATTCTGACGTGGACATCTCCAGGGCCATCAACCTCCTACCACAGCATTCCCTGTCCTCAAGGGCGGACCAGCTCAGCGTGGGAAACGCCAGGGTCCGGGCCGGCCTCATGGCCTCCAGGCACCCTCTCCCATCCATTCTCCATCA-G i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5198 176 + 9642 aatttatccacatctgcacagatcccaaggattctgacgtggacatctccagggccatcaacctcctaccacaGCATTCCCTGTCCTCAAGGGCGGACCAGCTCAGCGTGGGAAACGCCAGGGTCCGGGCCGGCCTCATGGCCTCCAGGCACCCTCTCCCATCCATTCTCCATCA-G i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42184 175 - 432965 aatttatccacatctgcacagatcccaaggattctgacgtggacatctccagggccatcaccctcctaccacaGCATTCCCTGGCCTCAAGGGCTG-CCAGCTCAGCGTGGGAAACGCCAGGGTCCCGGCCGGCCTCATGGCCTCCAGGCACCCTCTCCCATCCATTCTCCATCA-G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98330 176 + 85365473 aatttacccacatctgcacagatcccAAGGGTTCTGACGCGGACATCTCCAGGGTCACCACCCTCCTACCACAGCACCCCCTGGCCTCGAGGGCTGACCAGCTCAGTGTGGGAGACGCCAGGGTCCGGGGCGGCCTTGTGGCCTCCAGGCACCCTCTCTCATCCGTTCTCCATCA-G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947137 175 + 185818997 TATGTATCC-CATCTGCACGGATCCCAAGGATTCCGACGTGGACATCTCCAGGGCCATCACCCTCCTACCACAGCATCCCCTGGCCTCAAGGGCTGACCGGCTCAGTGTGGGAGACACCAGGGTCCGGGCCGGCCTTGTGGCCTCCAGGCACCCTCTCCCATCAATTCTCCATCA-G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33563469 175 + 192294377 TATGTATCC-CATCTGCACGGATCCCAAGGATTCCGACGTGGACATCTCCAGGGCCATCACCCTCCTACCACAGCATCCCCTGGCCTCAAGGGCTGACCGGCTCAGTGTGGGAGACACCAGGGTCCGGGCCGGCCTTGTGGCCTCCAGGCACCCTCTCCCATCAATTCTCCATCA-G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4324438 175 - 9440265 aatgtatcc-catctgcacgaatcccaaggattccgacgtggacatctccagggccatcaccctcctaccacaGCATCCCCTGGCCTCAAGGGCTGACCGGCTCAGTGTGGGAGACACCAGGGTCCGGGCCAGCCTTGTGGCCTCCAGGCACCCTCTCCCATCAATTCTCCATCA-G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16915033 174 - 21915920 aatgtatcc-catctgcacggatcccaaggattccgacgtggacatctccagggccatcaccctcctaccacaGCATCCCCTGGCCTCAAGGGCTGACCAGCTCAGTGTGGGAGACACCAGGGTCCGGGCCGGCCTTGTGGCCTCCAGGCA-CCTCTCCCATCAATTCTCCATCA-G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 54252 175 - 21531802 AATGTATCC-AGTCTGCACAGATCCCAAGGATTCCGACATGGACATCTCCAGGGCCATCACCCTCCTACCACAGCATCCCCTGGCCTCGAGGGCTGACCGGCTCAGTGTGAGAGACACCAGGGTCCGGGCCGGCCTTGTGGCCTCCAGGCACCCTCTCCCATCCATTCTCCATCA-G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 78852 175 - 2515279 aatgtatcc-catctgcacggatcccaaggattccgacgtggacatctccagggccatcaccctcctaccacaGCATCCCCTGGCCTCAAGGGCTGACCGGCTCAGTGTGGGAGACACCAGGGTCCGGGCCGGCCTTGTGGCCTCCAGGCACCCTTTCCCATCAGTTCTCCATCA-G i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 235715 176 + 6586416 ACTGTACCCacatctgcacggatcccaaggattccgacgtggacatctccagggccatcaccctcctaccacaGCATCCCCTGGCCTCGAGGGCTGACCGGCTCAGTGTGGCAGACACCAGGGTCTGGGCCGGCCTTGTGGCCTCCAGACACCCTCTCCCATCCATTCTCCACCA-G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602051 175 - 204313951 AATTTATCCACATCTGCACAGATCCCAATGATTCTGACGTGGACATCGCCAGGGCCATCACCCTCCTACCACAGCATCCTCCGACCTCAGGGGCTGACCAGCTCAGTGTGGGAGACACCAGGGTCTGGGCAGGCCTCATGGCCTCCAGGCACCCTCTCCTATCCATTCTCCATCA-- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 446939 175 - 2125214 AATTTATCCGCAACTGcacagatcccaaggattctgacgtggacatctccagggccatcaccctcctaccacaGCATCCCCCAGCCTCAGGGGCTGACCAGCTCAGTGTGGGAGACACCGGGGTCTGGGCGGGCCTCATGGCCTCCAGGCACCCTCTCTTATACATTCTCCATCA-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 61005 176 + 376347 aatTTATCCACATCTGCACAGATCCCAAGGATTCTGACGTGGACATGTCCAGGGCCATCACCCTCCTACCACAGCATCCCCCAGCCTCGGGGGCTGACCAGCTCAGTGTGGGAGACACCAGGGTCTGGGCGGGCCTCATGGCCTCCAGGCACCCGCTCCCATCCATTCTCCATCAC- i aotNan1.NW_018514293v1 I 1054 I 17 e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I a score=119295.000000 s hg38.chr7_KI270899v1_alt 81011 19 + 190869 GCACCAGGCAAATCTCAAT s panTro5.chr7_NW_015973523v1_random 14380 19 - 29993 GCACCAGGCAAATCTCAAT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5374 19 + 9642 GCACCAGGCAAATCTCAAT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42359 19 - 432965 GCACCATGCAAATCTCAAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98506 19 + 85365473 GCACCAGACAAATCTCAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947312 19 + 185818997 GCGCCAGGCTAATCTCAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33563644 19 + 192294377 GCGCCAGGCTAATCTCAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4324613 19 - 9440265 GCGCCAGGCTAATCTCAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16915207 19 - 21915920 GCGCCAGGCAAATCTCAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 54427 19 - 21531802 GCGCCAGGCAAATCTCAAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79027 19 - 2515279 GCGCCAGGCAAATCTCAAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 235891 19 + 6586416 GCGCCAGGCAAATCTCAAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602226 19 - 204313951 CTGCCAGCCAAGCCTCAAT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 447114 19 - 2125214 CTGTCAGCCAAGCCTTAAT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I e aotNan1.NW_018514293v1 61181 17 + 376347 I a score=2135333.000000 s hg38.chr7_KI270899v1_alt 81030 253 + 190869 CCCCAAATCCC-TCTGGCGCCATGGCCGTAAAGAGAAAACCCAGCCTGGGTGTGGCCCCCACCTCCGCGGCTGCAGCCCTGCCCTCCCCGAAGGCCGCTCCCCCTCCTGCTGCCGAGCCCAGGTCATGGCCTCAGCTCCAGCTTCTCACCGTTCCCAGGTTTTGCAAACTCTCTTGGGCCCTGTGTCTCACCTGCTTCTCCTAATTCTTACGTGGAGTCATGGAGGGTCCCCATATTGGGTTTTAGGGTTCAGA s panTro5.chr7_NW_015973523v1_random 14399 253 - 29993 CCCCAAATCCC-TTTGGCGCCGTGGCCGTAAAGAGAAAACCCAGCCTGGGCGTGGCCCCCACCTCCGCGGCTGCAGCCCTGCCCTCCTCGAAGGCCGCTCCCCCTCCTGCTGCCGAGCCCAGGTCACGGCCTCAGCTCCAGCTTCTCACCGTTCCCAGGTTTTGCAAACTCTCTTGGGCCCTGTGTCTCACCTGCTTCTCCTAATTCTTACGTGGAGTCATGGAGGGTCCCCATACTGGGTTTTAGGGTTCAGA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5393 252 + 9642 CCCCAAATCCC-TTTGGCGCCGTGGCCGTAAAGAGAAAACCCAGCCTGGG-GTGGCCCCCACCTCCGCGGCTGCAGCCCTGCCCTCCCCGAAGGCCGCTTCCCCTCCTGCTGCTGAGCCCAGGTCATGGCCTCAGCTCCAGCTTCTCACCGTTCCCAGGTTTTGCAAACTCTCTTGGGCCCTGTGTCTCACCTGCTTCTCCTAATTCTTACGTGGAGTCATGGAGGGTCCCCATACTGGGTTTTAGGGTTCAGA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42378 253 - 432965 CCCCAAATCCC-TTTGGCGCCGAGGCCATAAAGAGAAAACCCAGCCTGGGCGTGGCCCCCACCTCCGCGGCTGCAGCCCTGCCCTCCCCAAAGGCCGCTCCCCCTCCTGCTGCCGAGCCCAGGTCATGGCCTCAGCTCCAGCCTCTCACCGTTCCCAGGTTTTGCAAACTCTCTTGGGCCCTGTGTCTCACCTGCTTCTCCTAATTCTTACGTGGAGTCATGGAGGGTCCCCATATTGGGTTTTAGGGTTCAGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98525 252 + 85365473 CCCCAAATCCC-TTTGGCACCGTGGCCGTAAAGACAAAACCCAGCCTGGGCGTGGCCCCCACCTCCGCGGCTGCAGCCCTGCCCTCCCTGCAGGCCGCT-CCCCTCCTGCTGCCAAGCCCAGGTCATGGCCTCAGCTCCAGCTTCTCACCGTTCCCAGGTTTTGCAAACTCTCCTGGGCCCCGTGTCTCACCTGCTTCTCCTAATTCTTACGTGGAGTCACGGAGGGTCCCCATATTGGGTTTTAGGGTTCAGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947331 254 + 185818997 CCCCAAATCCCTTTTGGTGCCATTGCCGTAAAGATAAAACCCAGGCTGGGCGTGGTCCCCACCTCCGCAGCTGCAGCTCTGCCCTCCCCGCCGGCCATTCCCCTTCCTGCTGCCAAGCCCGGGTCATGGCCTCAGCCCCAGCTTCTCACCATTCCCAGATTTAGTGGACTCTCTGGGGCCCTGTGTCTCACCTGCTTCTCCTAATTCTTATGTGGAGTCATGGAGGATCCCCATATTGGGTTTTAGGGTTCAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33563663 254 + 192294377 CCCCAAATCCCTTTTGGTGCCATTGCCGTAAAGATAAAACCCAGGCTGGGCGTGGTCCCCACCTCCGCAGCTGCAGCTCTGCCCTCCCCACCGGCCATTCCCCTTCCTGCTGCCAAGCCTGGGTCATGGCCTCAGCCCCAGCTTCTCACCATTCCCAGATTTAGTGGACTCTCTGGGGCCCTGTGTCTCACCTGCTTCTCCTAATTCTTATGTGGAGTCATGGAGGATCCCCATATTGGGTTTTAGGGTTCAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4324632 254 - 9440265 CCCCAAATCCCTTTTGATGCCATTGCCGTAAAGATAAAACCCAGGCTGGGCGTGGTCCCCACCTCCGCAGCTGCAGCTCTGCCCTCCCCGCCGGCCATTCCCCTTCCTGCTGCCAAGCCTGGGTCATGGCCTCAGCCCCAGCTTCTCACCATTCCCAGATTTAGTGGACTCTCTGGGGCCCTGTGTCTCACCTGCTTCTCCTAATTCTTATGTGGAGTCATGGAGGATCCCCATATTGGGTTTTAGGGTTCAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16915226 254 - 21915920 CCCTAAATCCCTTTTGGCGCCGTTGCCGTAAAGATAAAACCCAGGCTGGGTGTGGTCCCCACCTCCGCAGCTGCAGCTCTGCCCTCCCCGCCGGCCATTCCCCTTCCTGCTGCCAAGCCCGGGTCATGGCCTCAGCCCCAGCTTCTCACCATTCCCAGATTTAGCGGACTCTCTGGGGCCCTGTGTCTCACCTGCTTCTCCTAATTCTTATGTGGAGTCATGGAGGATCCCCATATTGGGTTTTAGGGTTCAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 54446 253 - 21531802 CCCCAAATCCC-TTTGGCGCCATTGCCGTAAAGATAAAACCCAGTCTGGGCGTGGTCCCCACCTCCGCAGTTGCAGCCCTGCCCTCCCCACCGGCCGTTCCCCTTCCTGCTGCCAAGCCCGGGTCATGGCCTCAGCCCCAGCTTCTCACCATTCCCAGATTTAGCAGACTCTCTGGGGCCCTGTGTCTCACCTGCTTCCCCTAATTCTTACGTGGAGTCATGGAGGATCCCCATGTTGGGTTTTAGGGTTCAGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79046 254 - 2515279 CCCTAAATCCCTTTTGGCGCCGTTGCCGTAAAGATAAAACCCAGACTGGGTGTGGTCCCCACCTCCGCAGCTGCAGCTCTGCCCTCCCCGCCGGCCATTCCCCTTCCTGCTGCCAAGCCCAGGTCATGGCCTCAGCCCCAGCTTCTCACCATTCCCAGATTTAGCGGACTCTCTGGGGCCCTGTGTCTCACCTGCTTCTCCTAATTCTTATGTGGAGTCATGGAGGATCCCCATATTGGGTTTTAGGGTTCAGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 235910 253 + 6586416 CCCCAAATCCC-TTTGGCGCCGTTGCCGTAAAGATAAAACCCAGCCTGGGCGTGGTCCCCACCTCCGCAGCTGCAGCCCTGCCCTCCCCGCCGGCCGTTCCCCTTCCTGCTGCCAAGCCCGGGTCATGGCCTCAGCCCCAGCTTCTCCCCACTCCCAGATTTAGCGGACTCTCTGGGGCCTGGTGTCTCACCTACTTCCCCTAATTCTTACGTGGAGTCATGGAGGATCCCCATGTTGGGTTTTAGGGTTCAGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602245 253 - 204313951 CCCAAAATCCC-TTTGGTGCTGTTGCCATAAAGAGAAAACCCAGCCTGGGCGTGGCCACCACCTCCGCAGCTGCAGCCCTGCCCGCCCTGCGGGCCACTCCCCTTCCTGCTGCCAAGCCGGGGTCATGGCCTCAGCTCCAGCTTCTCACTGTTCCCAGGTTTGGCAAACTCTCTTGAGCCCTGTGTCCAACCTGCTTCTCCTAATTCTTACTTGGAGTCATGGAGGGTTCCCACAATGGGTTTTAGGATTCAGA i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 447133 253 - 2125214 CCCAAAATCCC-TTTGGTGCCGTTGCCATAAAGAGAAAACCCAGCCTGGGCATGGCCACCACCTCCGCAGCTGCAGCCCTGCCCGCCCTGCAGGCCACTCCCCTTCCTGCTGCCAAGCCGAGGTCATGGCTTCAGTTCCAGCTTCTCACTGTTCCCAGGTTTGGTAAACTCTCTTGGGCCCTGTGTCCCACCTGCTTCTCCTAATTCTTACATGGAGTCATGGAGGGTCCCCACAATGGGTTTTAGGATTCAGA i cebCap1.NW_016107703v1 C 0 I 433 s aotNan1.NW_018514293v1 61198 241 + 376347 CCCAAAATCCC-GTTGGTGCCATTGCCATAAAGAGAAAACCCGGGCTGGGTGTGGCCACCCCCTCCGCAGCTGCAgccctgcccgccctgccggccactccccttcctgcTGCCAAGCCGGGGTCATGGCCTCAGCTCCAGCTTCTCACTGTTTCCAGGTT------------TTGGGCCCTGTGTCCCACCTGCTTCTGCTAATTCTTACGTGGAGTCACGGACGGTCCCCACAATGGGTTTTAGGATTCAGA i aotNan1.NW_018514293v1 I 17 C 0 e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I a score=56890.000000 s hg38.chr7_KI270899v1_alt 81283 9 + 190869 AGCAAACCC s panTro5.chr7_NW_015973523v1_random 14652 9 - 29993 AGCAAACCC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5645 9 + 9642 AGCAAACCC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42631 9 - 432965 AGCAAACCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98777 9 + 85365473 AGCAAACCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947585 9 + 185818997 ATCAAACCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33563917 9 + 192294377 ATCAAACCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4324886 9 - 9440265 ATCAAACCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16915480 9 - 21915920 ATCAAACCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 54699 9 - 21531802 ATCAAACCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79300 9 - 2515279 ATCAAACCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 236163 9 + 6586416 ATCAAACCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602498 8 - 204313951 -GCCAATCC i calJac3.chr2 C 0 I 3 s aotNan1.NW_018514293v1 61439 8 + 376347 -GCCAATCC i aotNan1.NW_018514293v1 C 0 I 140 e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=252242.000000 s hg38.chr7_KI270899v1_alt 81292 37 + 190869 AACCCAGCAGGCTCCTCTCCTAGGAAGACCCCATCAG s panTro5.chr7_NW_015973523v1_random 14661 37 - 29993 AACCCAGCAGGCTCCTCTCCTAGGAAGACCCCTTCAG i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5654 37 + 9642 AACCCAGCAGGCTCCTCTCCTAGGAAGACCCCATCAG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42640 37 - 432965 AACCCAGCAGGCTCCTCTCCTAGGAAGACCCCATCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98786 37 + 85365473 AACCCCGCAGGCTCCTCTCCTGGGAAGACCCCATCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947594 37 + 185818997 AACCCAGCAGGCTCCTCTCCTGGGAAGACCCCATCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33563926 37 + 192294377 AACCCAGCAGGCTCCTCTCCTGGGAAGACCCCATCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4324895 37 - 9440265 AACCCAGCAGGCTCCTCTCCTGGGAAGACCCCATCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16915489 37 - 21915920 AACCCAGCAGGCTCCTCTCCTGGGAAGACCCCATCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 54708 37 - 21531802 AACCCAGCAGGTTCCTCTCCTGGGAAGACCCCATCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79309 37 - 2515279 AACCCAGCAGGCTCCTCTCCTGGGAAGACCCCATCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 236172 37 + 6586416 AACCCAGCAGGCTCCTCTCCTGGGAAGACCCCATCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602509 37 - 204313951 AATGCAGCAGACCCCTCTCCTGGGAAAACCACTTTAG i calJac3.chr2 I 3 C 0 e otoGar3.GL873611 2180078 111 - 8137123 I e canFam3.chr6 60992364 168 - 77573801 I e aotNan1.NW_018514293v1 61447 140 + 376347 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=425842.000000 s hg38.chr7_KI270899v1_alt 81329 69 + 190869 GGACCCCTCCCTTTCCACTGCTCTGTGAGCCTGCAGGGCCCAAGGTGGC----------------CCTGATCTGACAGCATCTCT s panTro5.chr7_NW_015973523v1_random 14698 69 - 29993 GGACCCCTCCCTTTCCACTGCTCTGTGAGCCTGCAGGGCCCAAGGTGGC----------------CCTGATCTGACAGCATCTCT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5691 69 + 9642 GGACCCCTCCCTTTCCACTGCTCTGTGAGCCTGCAGGGCCCAAGGTGGC----------------CCTGATCTGACAGCATCTCT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42677 69 - 432965 GGACTCCTCCCTTTCCACTGCTCTGTGAGCCTGCAGGGCCCAAGGTGGC----------------CCTGATCTGACAGCATCTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98823 69 + 85365473 GGACCCCTCCCTTCCCACTGCTCTGCGAGCCTGCAGGGCCCACGGTGGC----------------CCTGATCTGACAGCATCTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947631 69 + 185818997 GGACCCCTCCCTTCCCACTGCTCTGTGAGCCTGCAGGGCCCACCGTGGC----------------CCTGATCTGACAGTGTCTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33563963 69 + 192294377 GGACCCCTCCCTTCCCACTGCTCTGTGAGCCTGCAGGGCCCACCGTGGC----------------CCTGATCTGACAGTGTCTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4324932 69 - 9440265 GGACCCCTCCCTTCCCACTGCTCTGTGAGCCTGCAGGGCCCACCGTGGC----------------CCTGATCTGACAGTGTCTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16915526 69 - 21915920 GGACCCCTCCCTTCCCACTGCTCTGTGAGCCTGCAGGGCCCACCGTGGC----------------CCTGATCTGACAGTGTCTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 54745 69 - 21531802 GGACCCCTCCCTTCCCACTACTCTTCGAGGCTGCAGGGCCCACCGTGGC----------------CCTGATCTGACAGCGTCTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79346 69 - 2515279 GGACCCCTCCCTTCCCACTGCTCTGTGAGCCTGCAGGGCCCACCGTGGC----------------CCTGATCTGACAGTGTCTCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 236209 69 + 6586416 GGACCCCTCCCTTCCCCCTGCTCTGCGAGGCAGCAGGGCCCACCGTGGC----------------CCTGATCTGACAGCGTCTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602546 42 - 204313951 GTATACCTCCCAT---------------------------CACAGTGGC----------------ACTGATCAGATAGTGCCTCA i calJac3.chr2 C 0 C 0 s otoGar3.GL873611 2180189 82 - 8137123 GAGCCCATCCCCTCCCCCTACTCTGTGAGCCTGCAGCATCCAAGGTGGCCAAGTGCATGCCCTGGCTTGGACTGACAGCCTC--- i otoGar3.GL873611 I 111 C 0 e canFam3.chr6 60992364 168 - 77573801 I e aotNan1.NW_018514293v1 61447 140 + 376347 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=336200.000000 s hg38.chr7_KI270899v1_alt 81398 55 + 190869 GTGTGGTAGGGAGGGAGCTGCGGGTGAGCAGCCAGTAGCACTCGTCTCACGCCCT s panTro5.chr7_NW_015973523v1_random 14767 55 - 29993 GTGTGGTGGGGAGGGAGCTGCGGGTGACCAGCCAGCAGCACTCGTCTCACGCCCT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5760 55 + 9642 GTGTGGTGGGGAGGGAGCTGCGGGTGACCAGCCAGCAGCACTCGTCTCACGCCCT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42746 55 - 432965 GCGTGGTGGGGAGGGAGCTGCGGGTGAGCAGCCAGCAGCACTCGTCTCACGCCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98892 55 + 85365473 GCCTGGTGCGGAGGGAGCCGTGTGTGAGCAGCCAGCAGCACTCATCTCACGCCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947700 55 + 185818997 GCCTGGTGGGGAGAGTGCCGCAGGGGAGCAGCCAGCAGCACATATCTCACGACCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33564032 55 + 192294377 GCCTGGTGGGGAGGGTGCCGCAGGGGAGCAGCCAGCAGCACATATCTCACGACCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4325001 55 - 9440265 GCCTGGTGGGGAGGGTGCCGCAGGGGAGCAGCCAGCAGCACATATCTCACGACCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16915595 55 - 21915920 GCCTGGTGGGGAGGGTGCCGCAGTGGAGCAGCCAGCAGCACACATCTCACGACCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 54814 55 - 21531802 GCCTGGTGGGGAGGGTGCCACAGGGGAGCAGCCAGCAGCACACATCTCACAACCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79415 55 - 2515279 GCCTGGTGGGGAGGGTGCCGCAGGGGAGCAGCCAGCAGCACACATCTCACGACCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 236278 55 + 6586416 GCCTGGTGGGGAGGGTGCTGCGGGGGAGCAGCCAGCAGTACACATCTCACGACCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602588 55 - 204313951 GCCTGGTGGGAAGGGTGCCATGGGTGGGCAGCCAGTAGCACTCGCCTCTTGCCTT i calJac3.chr2 C 0 I 3 s saiBol1.JH378296 312098 50 - 2409723 GTGAGGTAGCGGAGGAGCTGT-----ACCAGTCAGTAGCACTTGGCTCTCGCCTC i saiBol1.JH378296 N 0 I 3 s otoGar3.GL873611 2180271 46 - 8137123 --------AGGAGGAGGACTCAGCC-ATCAGACTGTGGCCCTTGCCTCATGCTCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60992364 168 - 77573801 I e aotNan1.NW_018514293v1 61447 140 + 376347 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=315228.000000 s hg38.chr7_KI270899v1_alt 81453 43 + 190869 CCCCAAGGCCATGTGTGTCTATGTCCACGTGTGTCTGTAGGTG s panTro5.chr7_NW_015973523v1_random 14822 43 - 29993 CCCCAAGGCcatgtgtgtctatgtccatgtgtgtctgtaggtg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5815 43 + 9642 CCCCAAGGCCATGTGTGTCTATGTCCACGTGTGTCTGTAGGTG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42801 43 - 432965 CCCCAAGGCCATGtgtgtctatgtccacgtgtgtctgtaggtg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98947 43 + 85365473 CCCCAAGGCGATGTGTGTCTGTGTCCACGTGTGTCTGTAGGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947755 43 + 185818997 CCCCAAGGCGATGTGTGTCGACGTCCACGAGTGTCTGCAGGTG i rheMac8.chr3 C 0 I 4 s macFas5.chr3 33564087 43 + 192294377 CCCCAAGGCGATGTGTGTCGACGTCCACGAGTGTCTGCAGGTG i macFas5.chr3 C 0 I 4 s macNem1.NW_012019910v1 4325056 43 - 9440265 CCCCAAGGCGATGTGTGTCGACGTCCACGAGTGTCtgcaggtg i macNem1.NW_012019910v1 C 0 I 4 s cerAty1.NW_012002954v1 16915650 43 - 21915920 CCCCAAGGTGATGTGTGTCGACGTCCACGAGTGTCTGCAGGTG i cerAty1.NW_012002954v1 C 0 I 303 s chlSab2.chr28 54869 43 - 21531802 CCCCAAGACGATGTGTGTCGATGTCCACGTGTGTCTGCAGGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79470 43 - 2515279 CCCCAAGGTGATGTGTGTCGACGTCCACGAGTGTCTGCAGGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 236333 43 + 6586416 CCCCAAGGTGATGCGTGTTGATGTCCACGTGTGTCTGCAGGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602646 43 - 204313951 CCCCAGTAGGATGGGCATCTCTGTCCAtgtgtgtctgcagata i calJac3.chr2 I 3 I 4 s saiBol1.JH378296 312151 43 - 2409723 CCTCTGCGGGATGTGTATCTCTGTCCACATGTGTCTTCAGgtg i saiBol1.JH378296 I 3 I 4 s aotNan1.NW_018514293v1 61587 41 + 376347 CCCCGGGGGGATGTGCATCTCTGTCCACGTGTGTCTGCAGG-- i aotNan1.NW_018514293v1 I 140 C 0 s otoGar3.GL873611 2180317 35 - 8137123 GACCAAGGGCGTGCATCTATCTGTCTGTGTCTGTC-------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60992364 168 - 77573801 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=13434.000000 s hg38.chr7_KI270899v1_alt 81496 2 + 190869 TG s panTro5.chr7_NW_015973523v1_random 14865 2 - 29993 tg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5858 2 + 9642 TG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42844 2 - 432965 tg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98990 2 + 85365473 TG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947802 2 + 185818997 TG i rheMac8.chr3 I 4 C 0 s macFas5.chr3 33564134 2 + 192294377 TG i macFas5.chr3 I 4 C 0 s macNem1.NW_012019910v1 4325103 2 - 9440265 tg i macNem1.NW_012019910v1 I 4 C 0 s chlSab2.chr28 54912 2 - 21531802 TG i chlSab2.chr28 C 0 I 873 s manLeu1.NW_012101810v1 79513 2 - 2515279 CG i manLeu1.NW_012101810v1 C 0 I 4 s colAng1.NW_012117710v1 236376 2 + 6586416 TG i colAng1.NW_012117710v1 C 0 I 365 s calJac3.chr2 146602693 2 - 204313951 tg i calJac3.chr2 I 4 C 0 s saiBol1.JH378296 312198 2 - 2409723 tg i saiBol1.JH378296 I 4 C 0 e otoGar3.GL873611 2180352 0 - 8137123 C e canFam3.chr6 60992364 168 - 77573801 I e cerAty1.NW_012002954v1 16915693 303 - 21915920 I e aotNan1.NW_018514293v1 61628 0 + 376347 C e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=66154.000000 s hg38.chr7_KI270899v1_alt 81498 11 + 190869 AGCGTGTCTGC s panTro5.chr7_NW_015973523v1_random 14867 11 - 29993 agcgtgtctgc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5860 11 + 9642 AGCGTGTCTGC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42846 11 - 432965 agcgtgtctgc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 98992 11 + 85365473 AGCGTGTCTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947804 11 + 185818997 AGCGTGTCTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33564136 11 + 192294377 AGCGTGTCTGC i macFas5.chr3 C 0 I 150 s macNem1.NW_012019910v1 4325105 11 - 9440265 agcgtgtctgc i macNem1.NW_012019910v1 C 0 C 0 s manLeu1.NW_012101810v1 79519 11 - 2515279 AGCGTGTCTGC i manLeu1.NW_012101810v1 I 4 C 0 s calJac3.chr2 146602695 11 - 204313951 agcatgtctgc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312200 11 - 2409723 agcatgtctgc i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2180352 11 - 8137123 AGTGTGTCTGC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 236378 365 + 6586416 I e canFam3.chr6 60992364 168 - 77573801 I e chlSab2.chr28 54914 873 - 21531802 I e cerAty1.NW_012002954v1 16915693 303 - 21915920 I e aotNan1.NW_018514293v1 61628 0 + 376347 C e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=4664.000000 s hg38.chr7_KI270899v1_alt 81509 1 + 190869 A s panTro5.chr7_NW_015973523v1_random 14878 1 - 29993 a i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5871 1 + 9642 A i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42857 1 - 432965 a i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99003 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33947815 1 + 185818997 A i rheMac8.chr3 C 0 I 279 s macFas5.chr3 33564297 1 + 192294377 A i macFas5.chr3 I 150 C 0 s macNem1.NW_012019910v1 4325116 1 - 9440265 a i macNem1.NW_012019910v1 C 0 I 279 s manLeu1.NW_012101810v1 79530 1 - 2515279 A i manLeu1.NW_012101810v1 C 0 I 85 s calJac3.chr2 146602706 1 - 204313951 a i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312211 1 - 2409723 a i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2180363 1 - 8137123 G i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 236378 365 + 6586416 I e canFam3.chr6 60992364 168 - 77573801 I e chlSab2.chr28 54914 873 - 21531802 I e cerAty1.NW_012002954v1 16915693 303 - 21915920 I e aotNan1.NW_018514293v1 61628 0 + 376347 C e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=25446.000000 s hg38.chr7_KI270899v1_alt 81510 13 + 190869 CATGTACATCTGG s panTro5.chr7_NW_015973523v1_random 14879 13 - 29993 catgtacatctgg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5872 13 + 9642 CATGTACATCTGG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42858 13 - 432965 catgtacatctgg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99004 13 + 85365473 TATGTACATCTCG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33564298 13 + 192294377 TGTGTGCATCTCG i macFas5.chr3 C 0 C 0 s calJac3.chr2 146602707 13 - 204313951 catgtgtgtctta i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312212 13 - 2409723 catgcatgtctta i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 61628 11 + 376347 --TGCGCGTCTCA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2180364 13 - 8137123 TATGCTCCTCCCC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 236378 365 + 6586416 I e canFam3.chr6 60992364 168 - 77573801 I e chlSab2.chr28 54914 873 - 21531802 I e manLeu1.NW_012101810v1 79531 85 - 2515279 I e cerAty1.NW_012002954v1 16915693 303 - 21915920 I e macNem1.NW_012019910v1 4325117 279 - 9440265 I e rheMac8.chr3 33947816 279 + 185818997 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=9195.000000 s hg38.chr7_KI270899v1_alt 81523 2 + 190869 GT s panTro5.chr7_NW_015973523v1_random 14892 2 - 29993 gt i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5885 2 + 9642 GT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42871 2 - 432965 gt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99017 2 + 85365473 GT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33564311 2 + 192294377 GT i macFas5.chr3 C 0 C 0 s manLeu1.NW_012101810v1 79616 2 - 2515279 GT i manLeu1.NW_012101810v1 I 85 C 0 s calJac3.chr2 146602720 2 - 204313951 gt i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312225 2 - 2409723 gt i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 61639 2 + 376347 GT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2180377 2 - 8137123 AT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 236378 365 + 6586416 I e canFam3.chr6 60992364 168 - 77573801 I e chlSab2.chr28 54914 873 - 21531802 I e cerAty1.NW_012002954v1 16915693 303 - 21915920 I e macNem1.NW_012019910v1 4325117 279 - 9440265 I e rheMac8.chr3 33947816 279 + 185818997 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=28105.000000 s hg38.chr7_KI270899v1_alt 81525 7 + 190869 GTAGATA s panTro5.chr7_NW_015973523v1_random 14894 7 - 29993 gtagaca i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5887 7 + 9642 GTAGATA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42873 7 - 432965 gtagata i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99019 7 + 85365473 GTAGATA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33564313 7 + 192294377 GTAGATA i macFas5.chr3 C 0 I 34 s manLeu1.NW_012101810v1 79618 7 - 2515279 GTAGATA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146602722 7 - 204313951 gcagata i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312227 7 - 2409723 gtagata i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 61641 7 + 376347 GTAGATA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2180379 6 - 8137123 GCAGgt- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60992532 7 - 77573801 GCAtgta i canFam3.chr6 I 168 C 0 e colAng1.NW_012117710v1 236378 365 + 6586416 I e chlSab2.chr28 54914 873 - 21531802 I e cerAty1.NW_012002954v1 16915693 303 - 21915920 I e macNem1.NW_012019910v1 4325117 279 - 9440265 I e rheMac8.chr3 33947816 279 + 185818997 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=25913.000000 s hg38.chr7_KI270899v1_alt 81532 4 + 190869 TGTG s panTro5.chr7_NW_015973523v1_random 14901 4 - 29993 tgtg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5894 4 + 9642 TGTG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42880 4 - 432965 tgtg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99026 4 + 85365473 TGTG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33564354 4 + 192294377 TGTG i macFas5.chr3 I 34 C 0 s cerAty1.NW_012002954v1 16915996 4 - 21915920 tgtg i cerAty1.NW_012002954v1 I 303 C 0 s manLeu1.NW_012101810v1 79625 4 - 2515279 TGTG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146602729 4 - 204313951 cgtg i calJac3.chr2 C 0 I 22 s saiBol1.JH378296 312234 4 - 2409723 tgtg i saiBol1.JH378296 C 0 I 20 s aotNan1.NW_018514293v1 61648 4 + 376347 CGtg i aotNan1.NW_018514293v1 C 0 I 2 s otoGar3.GL873611 2180385 3 - 8137123 -gtg i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60992539 4 - 77573801 tgtg i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 236378 365 + 6586416 I e chlSab2.chr28 54914 873 - 21531802 I e macNem1.NW_012019910v1 4325117 279 - 9440265 I e rheMac8.chr3 33947816 279 + 185818997 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=12828.000000 s hg38.chr7_KI270899v1_alt 81536 23 + 190869 --------TGTGTC----------------------------------------------------CGTGTGTCTGT-----GTGT--GT s panTro5.chr7_NW_015973523v1_random 14905 23 - 29993 --------tgtgtc----------------------------------------------------cgtgtgtctgt-----gtgt--gt i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5898 23 + 9642 --------TGTGTC----------------------------------------------------CATGTGTCTGT-----GTGT--GT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42884 23 - 432965 --------tgtgtc----------------------------------------------------catgtgtctgt-----gtgt--gt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99030 13 + 85365473 --------TGTGTC----------------------------------------------------C---------------GTGT--GT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33564358 21 + 192294377 --------TCTGTC----------------------------------------------------TGTGTGTCTGT-----ATGT---- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16916000 21 - 21915920 --------tctgtc----------------------------------------------------tgtgtgtctgt-----gtgt---- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 79629 23 - 2515279 --------TGTGCC----------------------------------------------------TGTGTGTGTGT-----GTGTGT-- i manLeu1.NW_012101810v1 C 0 I 152 s colAng1.NW_012117710v1 236743 21 + 6586416 --------tgtgtc----------------------------------------------------catgtgtctgt-----gtgt---- i colAng1.NW_012117710v1 I 365 C 0 s calJac3.chr2 146602755 69 - 204313951 --------tgtgtctggatgtctgcctgtttgtgtgcctggatatgtgCATCTCAATGTAGA----tgtgtgtctgt-----gtgt---- i calJac3.chr2 I 22 C 0 s saiBol1.JH378296 312258 71 - 2409723 --------tgtgtctggacttctgcatgtgtgtgtg--tggatatgtgcatcttgatgtagatatttgtgtgtccct-----gtgt---- i saiBol1.JH378296 I 20 C 0 s aotNan1.NW_018514293v1 61654 15 + 376347 ------------------------------------------------------------------tccgtgtctct-----gtct---- i aotNan1.NW_018514293v1 I 2 C 0 s otoGar3.GL873611 2180388 26 - 8137123 --------tgtgtc----------------------------------------------------tgtgtgtctgtgtccagtgt---- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60992543 27 - 77573801 tctctgcgtgtgtc----------------------------------------------------ggcctgtaagt-----gt------ i canFam3.chr6 C 0 C 0 e chlSab2.chr28 54914 873 - 21531802 I e macNem1.NW_012019910v1 4325117 279 - 9440265 I e rheMac8.chr3 33947816 279 + 185818997 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=156181.000000 s hg38.chr7_KI270899v1_alt 81559 46 + 190869 CTATGTCCCTGTGTGTC------TGTCTGCATGTGTATATGCGTGTCTACAT s panTro5.chr7_NW_015973523v1_random 14928 46 - 29993 ctatgtccctgtgtgtc------tgtctgcatgtgtatatgcgtgtctacat i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5921 46 + 9642 CTATGTCCCTGTGTGTC------TGTCTGCATGTGTATATGCGTGTCTACAT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42907 46 - 432965 ctatgtccctgtgtgtc------tgtctgcatgtgtatatgcgtgtctacat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99043 42 + 85365473 CTATGTTCCTGTG----------TGTCTGCGTGTGCATATGTGTGTCTACAC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33564379 48 + 192294377 CTGTGTCCATGTGTGTCTG--TGTGTCCGCATGTGTACATGCACATCTGC-- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16916021 50 - 21915920 ctgtgtccatgtgtgtctg--tgtgtccgcatgtgtacatgcatatctgcat i cerAty1.NW_012002954v1 C 0 C 0 s colAng1.NW_012117710v1 236764 50 + 6586416 ctgtgtccatgtgtgtctg--tctgtctgCATGTGTCCATGCACGTCTGCAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602824 52 - 204313951 ctatgtccatgtgtgtctgtgtgtgtctgcatgtgtatatgtgtgCCTACAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312329 48 - 2409723 ctatgtccatgtgtgtc----tgtgtctgcgtgtgtatatgtgcgcccacat i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 61669 34 + 376347 ctg------------------tgcgtctgcgtgtgtgtatgtgtgcctacgt i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2180414 48 - 8137123 gtgtgtctgtatgtgtctt--tgtgtctgcgtgtaactgtgtgtctttct-- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60992570 44 - 77573801 ccgtgtctctgtatctc----tgtgt----atgtatccatgtgtctctgtct i canFam3.chr6 C 0 C 0 e chlSab2.chr28 54914 873 - 21531802 I e manLeu1.NW_012101810v1 79652 152 - 2515279 I e macNem1.NW_012019910v1 4325117 279 - 9440265 I e rheMac8.chr3 33947816 279 + 185818997 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=139249.000000 s hg38.chr7_KI270899v1_alt 81605 22 + 190869 ATGTGTCTCCATGTCAGTGT--GT s panTro5.chr7_NW_015973523v1_random 14974 22 - 29993 atgtgtctccgtgtcagtgt--gt i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5967 22 + 9642 ATGTGTCTCCATGTCAGTGT--GT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42953 22 - 432965 atgtgtctccgtgtcagtgt--gt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99085 20 + 85365473 ATGTGTCTCCGTGTCG--GT--GT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33948095 22 + 185818997 atgtgtctctgtgtcactgt--gt i rheMac8.chr3 I 279 C 0 s macFas5.chr3 33564427 22 + 192294377 ATGTGTCTCTGTGTCACTGT--GT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4325396 22 - 9440265 atgtgtctctgtgtcactgt--gt i macNem1.NW_012019910v1 I 279 C 0 s cerAty1.NW_012002954v1 16916071 20 - 21915920 --gtgtctctgtgtcactgt--gt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 55787 22 - 21531802 ATGTGTCTCTGTGTCACTGT--GT i chlSab2.chr28 I 873 C 0 s manLeu1.NW_012101810v1 79804 22 - 2515279 ATGTGTCTCTGTGTCACTGT--GT i manLeu1.NW_012101810v1 I 152 C 0 s colAng1.NW_012117710v1 236814 20 + 6586416 --GTGTCTCTGTGTCACTGT--GT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602876 20 - 204313951 ATATGTCTCCATGTCAGTGT---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312377 16 - 2409723 gtc--tctccatgtc--tgt---- i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 61703 22 + 376347 atatgtctccatgtcaatgtgt-- i aotNan1.NW_018514293v1 C 0 I 26 s otoGar3.GL873611 2180462 22 - 8137123 ctgtgtctgtgtatatctgt--at i otoGar3.GL873611 C 0 I 2 s canFam3.chr6 60992614 22 - 77573801 atatctctgtgtgtctgtct--gt i canFam3.chr6 C 0 C 0 e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=234917.000000 s hg38.chr7_KI270899v1_alt 81627 37 + 190869 GTCTCTATGCATATGTACA----TGTGCTTCTGTGTGCATG s panTro5.chr7_NW_015973523v1_random 14996 37 - 29993 gtctctgtgcatatgtaca----tgtgcttctgtgtgcatg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 5989 37 + 9642 GTCTCTGTGCATATGTACA----TGTGCTTCTGTGTACATG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 42975 37 - 432965 gtctctgtgcatatgtaca----tgtgcttctgtgtgcatg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99105 37 + 85365473 GTCTCTGTGCATATGTACA----TGTGTTTCTGCGTGCATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33948117 37 + 185818997 gtcactgtgtatatgtgca----tgtgcttctgtgtgcgtg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33564449 37 + 192294377 GTCACTGTATATATGTGCA----TGTGCTTCTGTGTGCGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4325418 37 - 9440265 gccactgtgtatatgtgca----tgtgcttctgtgtgcatg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16916091 37 - 21915920 gtcactgtgtatatgtgca----tgtgcttctgtgtgcgtg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 55809 37 - 21531802 GTCACTGTGTATATGTACA----TGTGCTTCTGTGTGCGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79826 37 - 2515279 GTCACTGTGTATATGTGCA----TGTGCTTCTGTGTGCGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 236834 37 + 6586416 GTCACTGTGTACATGTACA----TGTGCTTCTGTGTGTGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602896 25 - 204313951 GTTTCTTTGTAAATGTCCA----TGTGTC------------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312393 25 - 2409723 gtgtctgtgtaaacgtcca----tgtgtc------------ i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2180486 41 - 8137123 ctctctgtgcctgtgtataactctgtgtctctgtgtctgtg i otoGar3.GL873611 I 2 I 10 s canFam3.chr6 60992636 25 - 77573801 gtctctgtgtatgtatccg----tgtgtg------------ i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 61725 26 + 376347 I e cebCap1.NW_016107703v1 447386 433 - 2125214 I a score=39576.000000 s hg38.chr7_KI270899v1_alt 81664 3 + 190869 TCC s panTro5.chr7_NW_015973523v1_random 15033 3 - 29993 tcc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 6026 3 + 9642 TCC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 43012 3 - 432965 tcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99142 3 + 85365473 TCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33948154 3 + 185818997 tcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33564486 3 + 192294377 TCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4325455 3 - 9440265 tcc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16916128 3 - 21915920 tcc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 55846 3 - 21531802 TCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79863 3 - 2515279 TCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 236871 3 + 6586416 TCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146602921 3 - 204313951 TCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312418 3 - 2409723 tcc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 447819 3 - 2125214 tcc i cebCap1.NW_016107703v1 I 433 C 0 s otoGar3.GL873611 2180537 3 - 8137123 TCC i otoGar3.GL873611 I 10 I 2 s canFam3.chr6 60992661 3 - 77573801 tcc i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 61725 26 + 376347 I a score=3377904.000000 s hg38.chr7_KI270899v1_alt 81667 304 + 190869 ATGTGTTTCTATGTGTCT------GTCTGCATGTGTCTA-AGGCTCACAGGAC----AGAAGCCACAGCCCCA------------------CTTCTGTCAGGGCCATGG-GGAGGTCAGTGTTCTGGAAAACACGTCCCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-TCTGCCCCCACAGTTGGGGAGCACAGGCGCCCACAGCTCAGACCCACAGCTGTGACTCACCCACCTGCTGGTCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACAGAGAAGGAGCCCACAAGCAGGCAGGGTCCCAGGCAGGGTCTC s panTro5.chr7_NW_015973523v1_random 15036 304 - 29993 atgtgTTTCTATGTGTCT------GTCTGCATGTGTCTA-AGGCTCACAGGAC----AGAAGCCACAGCCCCA------------------CTTCTGTCAGGGCCATGG-GGAGGTCAGTGTTCTGGAAAACACGTCCCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-TCTGCCCCCACAGTTGGGGAGCACAGGCGCCCACAGCTCAGACCCACAGCTGTGACTCACCCACCTGCTGGTCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACAGAGAAGGAGCCCACAAGTAGGCAGGGTCCCAGGCAGGGTCTC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 6029 304 + 9642 ATGTGTTTCTATGTGTCT------GTCTGCGTGTGTCTA-AGGCTCACAGGAC----AGAAGCCACAGCCCCA------------------CTTCTGCCAGGGCCATGG-GGAGGTCAGTGTTCTGGAAAACACGTCCCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-TCTGCCCCCACAGTTGGGGAGCACAGGCGCCCACAGCTCAGACCCACAGCTGTGACTCACCCACCTGCTGGTCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACAGAGAAGGAGCCCACAAGCAGGCAGGGTCCCAGGCAGGGTCTC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 43015 303 - 432965 atgtgtttctgtgtgtct------gtctgCATGTGTCTA-AGGCTCACAGGAC----AGAAGCCACAGCCCCA------------------CTTCTATCAGGGCCATGG-GGAGGTCAGTGTTCTGGAAAACACGTCCCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-TCTGCCCCCACAG-TGGGGAGCACAGGCGCCCACAGCTCAGACCCACAGCTGTGACTCACCCACCTGCTGGTCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACAGAGAAGGAGCCCACAAGCAGGCAGGGTCCCAGGCAGGGTCTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99145 304 + 85365473 ATGTGTCTGTGTGTGTCT------GCCTGCATGTGTCTA-AGGCTCACAGGAC----AGAAGCCACAGCCCCC------------------CTTCTGTCAGGGCCATGG-GGAGGTCAGTGTCCTGGAAAACACGTCCCCCACGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-TCCGCCCCCACAGTTGGGGAGCACAGGCACCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGTCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACGGAGAAGGAGCCCACAAGCAGGCAGGGTCCCAGGCAGGGTCTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33948157 302 + 185818997 atgtgtctctgtgtatct------ttctgcctgtgtCTA-AGGTTCACAGGAC----AGAAGCCAGAGCCCCA------------------CTTCTCTCAGGGTCACGG-GGAGGTCAGTGTCCTGGAAAACACGTCCCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-CCTGTCCCCACAGCTGGGGAGCACAGGCGCCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGCCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACAG-GGAGGAGCCCACGGG-AGGCAGGGTCCCAGGCAGGGTCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33564489 302 + 192294377 ATGTGTCTCTGTGTGTCT------TTCTGCCTGTGTCTA-AGGTTCACAGGAC----AGAAGCCAGAGCCCCA------------------CTTCTCTCAGGGTCACGG-GGAGGTCAGTGTCCTGGAAAACACGTCCCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-CCTGTCCCCACAGCTGGGGAGCACAGGCGCCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGCCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACAG-GGAGGAGCCCACGGG-AGGCAGGGTCCCAGGCAGGGTCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4325458 302 - 9440265 atgtgTCTCTGTGTGTCT------TTCTGCCTGTGTCTA-AGGTTCACAGGAC----AGAAGCCAGAGCCCCA------------------CTTCTCTCAGGGTCACGG-GGAGGTCAGTGTCCTGGAAAACACGTCCCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-CCTGTCCCCACAGCTGGGGAGCACAGGCGCCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGCCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACAG-GGAGGAGCCCACGGG-AGGCAGGGTCCCAGGCAGGGTCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16916131 302 - 21915920 atgtgTCTCTGTGTGTCT------TTCTGCCTGTGTCTA-AAGTTCACAGGAC----AGAAGCCAGAGCCCCA------------------CTTCTCTCAGGGTCACAG-GGAGGTCAGTGTCCTGGAAAACACGTCCCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-CCTGTACCCACAGCTGGGGAGCACAGGCGCCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGCCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACAG-GGAGGAGCCCACGGG-AGGCAGGGTCCCAGGCAGGGTCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 55849 301 - 21531802 ATGTGTCTCTGTGTGTCT------GTCTGCCTGTGTCTA-AAGTTCATAGGAC----AGAAGCCAGAGCCCCA------------------CTTCTGTCAGGGTCACGG-GGAGGTCAGTGTCCTGGAAAACACATCCCCCAGGGGTGTCTGACTCACAGAACCACTTCCTCATGCCCTC-CCCGTCCCCACAGCTGGGGAGCACAGGCGCCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGCCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGGGGACAG-GGAGGAGCTCATGGG-AGGCAGGGTCCCAGGCAGGGTCT- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 79866 302 - 2515279 ATGTGTCTCTGTGTGTCT------TTCTGCCTGTGTCTA-AAATTCACAGGAC----AGAAGCCAGAGCCCCA------------------CTTCTCTCAGGGTCACGG-GGAGGTCAGTGTGCTGGAAAACATGTCCCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-CCTGTCCCCACAGCTGGGGAGCACAGGCGCCCACAGCTCAGACCCGCAGTTGTGACTCACCCACCTGCTGGCCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGAGGACAG-GGAGGAGCCCACGGG-AGGCAGGGTCCCAGGCAGGGTCTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 236874 302 + 6586416 ATGTGTCTCTGTGTGTCT------GTCTGCCTGTGTCTA-AGGTTCACAGGAC----AGAAGCCAGAGCCCCA------------------CTTCTGTCAGGGTCACGG-GGAGGTCAGTGTCCTGGAAAACACGTCCCCCAGGGGCCTCTGACTCACGGAACCACTTCCTCATGCCCTC-CCCGTCCCCACAGCTGGGGAGCACAGGCGCCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGCCTCCAGCTGGGCCACTGCCCAGGAAGGGTAGCTGGGGACAG-GGAGGGGCCCACAGG-AGGCAGGGTCCCAGGCAGGGTCTT i colAng1.NW_012117710v1 C 0 I 8 s calJac3.chr2 146602924 304 - 204313951 ATGTG-TTCTGTGTGTCT------GTCTGCATGTGTCTA-AGGCTCACAGGGC----AGAAGTTACAGCCCCA------------------CTTCCGTCAGGGCCATGGAGGGAGTCATCGTCCTGGAAAACACATATCCCAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-TCCGCCCCCATAGTTGGGGAGTACAGGCGCCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGTCTCCAGCTGAGCCACTGCCCAGGAAGGGCAGCCGAGGACAGGGAGGGAGCCCATGAGCAGGTAGGGTCCCAGGCAGGGTCGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312421 305 - 2409723 atgtgtttctgtgtgcct------gtctgcatgtGTCTG-AGGCTCACAGGGC----AGAAGTCACAACCCCA------------------CTTCTGTCAGGACCATGGAGGGAGTCATCGTCCTGGAAACCATACACCCCAAGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-TCCACCCCCACAGTTGGGGAGCACAGGCGCCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGTCTCCAGCTGAACCACTGCCCAGGAAGGGCAGCCAAGGACAGGGAGGGAGCCCATGAGGAGGAAGGGTCCCAGGCAGGGTCAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 447822 305 - 2125214 atgtgtttctgtgtgtct------gtctgCATGTGTCAA-AGACTCACAGGGC----AGAAGTCACAGCCCCA------------------CTTCTGTCAGGGCCGTGGAGGGAGTCATCGTCCTGGAAAACACATACCCTAGGGGTCTCTGACTCACAGAACCACTTCCTCATGCCCTC-TCCGCCCCCACAGTTGGGGAGCACAGGCGCCCACAGCTCAGACCCGCAGCTGTGACTCACCCACCTGCTGGTCTCCAGCTGAGCCACTGCCCAGGAAGGGCAGCCGAGGACAGGGAGGGAGCCCATGAGGAGGTAGGGTCCCAGGCAGGGTAGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 61751 305 + 376347 atgtgtttctgtgtgtct------gtctgcatgtgtctA-AGGCTCACAGGAC----AGAAGTCACAGCCCCA------------------CTTCTGTCAGGGCCGTGGTGGGAGTCATCGTCCTGGAAAACACACACCGCAGGGGTCTCTGACTCACAGAACCACTTCCTCCTGCCCTC-TCCACCCCCGCAGCTGGGGAGCACAGGCGCCCACAGCTCAGAACCGCAGCTGTGACTCACCCACCTCCTGGCCTCCAGCTGAACCACTGCCCAGGAAGGGCAGCCGAGGACAGGGAGGGAGCCCATGAGGAGGTAGGGTCCCAGGCAGGGTCGC i aotNan1.NW_018514293v1 I 26 C 0 s otoGar3.GL873611 2180542 316 - 8137123 ACGTGTGACTGTGTGTGTGTATAGGTCTGTGTGTGTCTCTTGGCTCACAGGACACTTAGAGGCCACAGCCCTACACCTTTTCCTGTCTAGCCTTCTTTTGGGGCCATGG-GGAGGTCAGTGTCCTGGAGGACATGTCCCTT-GGCACCTCTGAGTCACTGAGCCACTTCCT----CCTTC-CCCCGCCCCGCAG-TGGGAAGCCCAGGCGCCCACAGCTCCAGCCCACAGA-GTGACTCACCCACCTGCC-ACCTCCAGCTGCACTGCTTCCTGGGAAGGGCAGCTGAGGACAG-AGGGGA---CATAAAGAGGCAGGATC-----TGGGGTCTC i otoGar3.GL873611 I 2 C 0 s canFam3.chr6 60992664 299 - 77573801 ------atctgtgtgtgt------gtCTAC----------TTGCTCACGGGACAGTCAGAAGCCACAGCCCAT-GTCCTCCTCCGTCTGGCCTGCTGTCGGGGCCACAG-GGAGGTCAGTGTCCTGGAAAACGAGCCCCACA-GGACCTGTGACTCA--GAGCCACTTCCTCCTGCCCCCGCCCGCCCCCGTAGCTGG--AACACAGGCACCCACAACTC-GAGCCACAGCC-TGACTCACCCACCTGCTAGTCTCGAGCTGGATCAGGTCCTGGGAAGGGCAGTGGAGGACATGGGGAGGAGCCGCGAGGAGGC-GGGTCC----CAAGGTCTC i canFam3.chr6 C 0 C 0 a score=77492.000000 s hg38.chr7_KI270899v1_alt 81971 20 + 190869 TCTGGGCC-TGCACACAGCCT s panTro5.chr7_NW_015973523v1_random 15340 20 - 29993 TCTGGGCC-TGCACACAGCCT i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 6333 20 + 9642 TCTGGGCC-TGCACACAGCCT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 43318 20 - 432965 TCTGGGCC-TGCACACAGCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99449 20 + 85365473 TCTGGGCC-TGTACACAGCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33948459 20 + 185818997 TTTGGGCC-TGCACCCAGCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33564791 20 + 192294377 TTTGGGCC-TGCACCCAGCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4325760 20 - 9440265 TTTGGGCC-TGCACCCAGCTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16916433 20 - 21915920 TCTGGGCC-TGCACCCAGCTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 56150 10 - 21531802 -----------TACCCAGTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 80168 20 - 2515279 TCTGGGCC-TGCACCCAGCTT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146603228 11 - 204313951 ----------TCACCCAGCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312726 11 - 2409723 ----------TCACCCCGCCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 448127 10 - 2125214 -----------CACCCAGCCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 62056 11 + 376347 ----------TCACCCAGGCT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2180858 21 - 8137123 TCTGGACCTTGGGTATAGCCT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60992963 20 - 77573801 TCAGGGCT-TTAGCAATGCCC i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 237176 8 + 6586416 I a score=1875454.000000 s hg38.chr7_KI270899v1_alt 81991 225 + 190869 GCTGACTGGCCCTGGGCAG-CCCTTTTCTCACAGGACAGGAGGCCTCCAAAACCCTTTGTGCCCAAGGCCCAAGAGCACTGGGAAAGGCCTGTGAGGCTGGGCGGCCACGCAGGCCTCTCACCCCCGGCCAGTGCTGGCCAACAAGTGAGC--------CAGATGGCATTTCACTGGG-------TCTTGATCTCCACATGTCCAAGTCTGCAAACACTGCTTCACATCTGCTTCTCCTGA s panTro5.chr7_NW_015973523v1_random 15360 225 - 29993 GCTGAGTGGCCCTGGGCAG-CCCTTTTCTCACAGGACAGGAGGCCTCCAAAACCCTTTGTGCCCGAGGCCCAAGAGCACTGGGAAAGGCCTGTGAGGCTGGGCGGCCACGCGGGCCTCTCACCCCCAGCCAGTGCTGGCCAACAAGTGAGC--------CAGATGGCATTTCATTGGG-------TCTTGATCTCCACATGTCCAAGTCTGCAAACACTGCTTCACATCTGCTTCTCCTGA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 6353 225 + 9642 GCTGAGTGGCCCTGGGCAG-CCCTTTTCTCACAGGACAGGAGGCCTCCAAAACCCTTTGTGCCCGAGGCCCAAGAGCACTGGGAAAGGCCTGTGAGGCTGGGCGGCCACGCAGGCCTCTCGCCCCCGGCCAGTGCTGGCCAACAAGTGAGC--------CAGATGGCATTTCATTGGG-------TCTTGATCTCCACATGTCCAAGTCTGCAAACACTGCTTCACATCTGCTTCTCCTGA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 43338 225 - 432965 GCTGAGTGGCCCTGGGCAG-CCCTTTTCTCACAGGACAGGAGGCCTCCAAAACCCTTTGTGCCCGAGGCCCAAGAGCGCTGGGAAAGGCCTGTGAGGCTGGGCGGCCACGCAGGCCTCTCACCCCCGGCCAGTGCTGGCCAACAAGTGAGC--------CAGATGGCATTTCACTGGG-------TCTTGATCTCCACGTGTCCAAGTCTGCAAACACTGCTTCACATCTGCTTCTCCTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99469 221 + 85365473 GCTGAGTGGCCCTGGGCAG-CCCTTTCCTCACAGGACCAGAGGCCTCCAAAACCCTTTGTGCCCGAGGCCCAAGAGCACCGGGAAGGGCCTGTTAGGCTGGGCAGCCACGCAGGCCTCTCA-CCCCGGCCAGTGCT-GCCAACAAGGGAGC--------CAGATGGCATTTCACTGGG-------TCTTGATCTGCACGTGTCCGAGTCTGCAAACG--GCTTCACATCTGTCTCTCCTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33948479 223 + 185818997 GCTCAGTGGCACTGGGCAG-CCCTTTTCTCACAGGACGGGAGGCCTCCAAAACCCTTTGTGCCCGAAGCCCAAGACCACTGGGAAGGGCCTGTGA-GTGGGGCAGCCACGCAGGCCTCTCA-CCCTGGCCGGTGCTGACCCCCCAGTGAGC--------GAGACGGCATTTCACTGGG-------TCTCGATCTGCACACGTCCAAGTTTGCAAACACGGCTTCGCATCTGTTTCTCCCGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33564811 223 + 192294377 GCTCAGTGGCACTGGGCAG-CCCTTTTCTCACAGGACGGGAGGCCTCCAAAACCCTTTGTGCCCGAAGCCCAAGACCACTGGGAAGGGCCTGTGA-GTGGGGCAGCCACGCAGGCCTCTCA-CCCTGGCCGGTGCTGACCCCCCAGTGAGC--------GAGACGGCATTTCACTGGG-------TCTCGATCTGCACACGTCCGAGTTTGCAAACACGGCTTCGCATCTGTTTCTCCCGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4325780 223 - 9440265 GCTCAGTGGCACTGGGCAG-CCCTTTTCTCACGGGACGGGAGGCCTCCAAAACCCTTTGTGCCCGAAGCCCAAGACCACTGGGAAGGGCCTGTGA-GTGGGGCAGCCACGCAGGCCTCTCA-CCCTGGCCGGTGCTGACCCCCCAGTGAGC--------GAGACGGCATTTCACTGGG-------TCTCGATCTGCACACGTCCGAGTTTGCAAACACGGCTTCACATCTGTTTCTCCCGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16916453 223 - 21915920 GCTCAGTGGCACTGGGCAG-CCCTTTTCTCACAGGACGGGAGGCCTCTAAAACCCTTTGTGCCCGAGGCCCAAGACCACTGGGAAGGGCCTGTGA-GTGGGGCAGCCATGCAGGCCTCTCA-CCCTGGCCGGTGCTGACCCCCGAGTGAGC--------GAGACGGCATTTCACTGGG-------TCTCGATTTGCACACGTCCGAGTTTGCAAACACGGCTTCGCATCTGTTTCTCCCGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 56160 223 - 21531802 GCTCAGTGGCCCTGGGCAG-CCCTTTTCTCACAGGACGGGAAGCCTCCAAAACCCTTTGTGCCCAAGGCCCAAGACCACTGGGAAGGGCCTGTGA-GTGGGGCAGCCACACAGGCCTCTCA-CCCTGGCCGGTGCTGGCCCCCAAGTGAGC--------GAGAAGGCCTTTCACTGGG-------TCTTGATCTGCACACGTCCGAGTTTGCAAACACGGCTTCGCATCTGTTTCTCCTGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 80188 223 - 2515279 GCTCAGTGGCACTGGGCAG-CCCTTTTCTCACAGGACGGGAGGCCTCCAAAACCCTTTGTGCCCGAGGCCCAAGACCACTGGGAAGGGCCTGTGA-GTGGGGCAGCCATGCAGGCCTCTCA-CCCTGGCCGGTGCTGACCCCCGAGTGAGC--------GAGACGGCATTTCACTGGG-------TCTCGATTTGCACACATCCGAGTTTGCAAACACGGCTTCGCATCTGTTTCTCCCGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 237184 199 + 6586416 GCTCAGTGGCCCTGGGCAG-CCCTTTTCTCACAGG-------------------------GCCGGAGGCCCAAGACCACTGGGAAGGGCCTGTGAGGCGGGGCAGCCACGCAGGCCTCTCA-CCCTGGCCAGTGCTGGCCCCCGAGTGAGC--------GAGACGGCGTTTCACTCGG-------TCTTGATCTGCACACGTCCGAGTTTGCAAACACGGCTTCGCGTCTGTTTCTCCTGA i colAng1.NW_012117710v1 I 8 C 0 s calJac3.chr2 146603239 229 - 204313951 GCTGAGTGGCCCTGGGCAA-CCCTTCTCTCACAGGATGGGAAGACTCCAAAACCCATTGTGCCGGAGTCCCGAGATCTTTGGGACGGGTCTGTGAGGCTCGGCAGCCACGCAGGCCTCTCATCCCCGGCCGGTGCTGGCCAACGAGTGAGC--------CAGATGGTGTTTCACTGTGGTCT---TCTTGATCTGCGCGTGTCTGAGTTGGCAAACCTTGCTTCAcatctgtttctccaga i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312737 226 - 2409723 GCTGGGCAGCCCTGGGCAA-CCCTTCTGTCACAGGATGGGAAGACTCCAAAACCCTTTGTGCCGGAAGCCAGAGATCGTTGGGACGGGCCTGTGAGGCTGGGCAGCCGCCTGGGCCTCTCACCCCTGGCCAGGGCTGGctaatgagtgagc--------cagatggcgtttcactgtgg------tcttgatctgcatgtgtctgagttggcaaaccttacttcgcatctgtttctccagg i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 448137 226 - 2125214 GCTGAGCGGCCCTGGGCAA-CCCTTCTCTCACAGGATGGGAAGACTCCAAAACCCTTTGTGCCAGAGGCCCGAGATCATTGGGATGGGCCTGTAAGCCTGGGCAGCCACGCAGGCCTCTCACCCCTGGCCAGTGCTGGCCAACGAGTGAGC--------CAGATGGCGATTCACTGTGG------TCTTGATCTGCGCATGTCTGAGTTGGCAAACCTTGCTTCACATCTGTTTCTCCAGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 62067 177 + 376347 GCTGAGCGGCCCTGGGCAA-CCGTTTTCTCACAGGATGGGAAGACTCCAAAACCCTCTGTGCCAGAGGCCCGAGATCATCGGGATGGGCCTGTGAGGCTGGGCAGCCACGCAGGCCTCTCGCCCCCGGCCAGTGCTGGCCAACCAGTGAGC--------CACATGGCGTTTCA-------------------------------------------------------CTGTTTCTCCAGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2180879 224 - 8137123 GCTGAGTGGC-CTGGGCAGCCCCTTCCCTCACTGGACT-GAGGCCTTC-AAATTCTTTCTGCCTGAGGCT-GAGACTTCTGGGAAGGACCTGTGAGGCTGGGAGATC----------CTAA-CCCCAGCCCGGGCT-GTCGGTATGTGAGTGCTGACCACTGACCACATTTCTCTGTGGTCTTGGTCTTGGGCTGCATTTA-CCAAGTTTGCAAACATTACtttgtatctgtttctccttg i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60992983 94 - 77573801 ---------------------------------------------------TCTCTTTCTGCCCAAGGCCCAGG-----CGGAGAGGG---GTGA----------------------------------------------------------------CTGGTGG-----CTCCCGG-------ACCTGATGCGCACAGAGC------------CACGGCTTTATATCCGAGGCTCCTGG i canFam3.chr6 C 0 C 0 a score=988891.000000 s hg38.chr7_KI270899v1_alt 82216 102 + 190869 GG-GAGAtgccccttca----------------tgtctcggggtctttttctcattcttactgatttatagaaattccttacacattcctgaggcctacccttcgttagttatgtcccc s panTro5.chr7_NW_015973523v1_random 15585 102 - 29993 GG-GAGAtgccccttca----------------tgtctcggggtcttttccccattcttactgatttatagaaattccttacacattcctgaggcctacccttcgttagttatgtcccc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 6578 102 + 9642 GG-GAGAtgccccttaa----------------tgtcttggggtcttttccccattcttactgatttatagaaattccttacacattcctgaggcctacccttcgttagttatgtcccc i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 43563 102 - 432965 GG-GAGAtgccccttca----------------tgtctcggggtctttttcccattcttactgatttatagaaattccttacgcattcctgaggcctacccttcgttagttatgtcccc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99690 102 + 85365473 GG-GAGATGCCCCTTCA----------------CGTCTCAGGGTCTTTTTCCCAttcttactgattaatagaaattccttacatagtcctgaggcctaccctttgttagttatgtcccc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33948702 102 + 185818997 GG-GAGATGCCCCTTCA----------------CGTCTCGGGGTCTTTTCCCCAttcttactgatttgtagaaattccttacatattcccgaggtctacctttcgttagttatgtcccc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33565034 102 + 192294377 GG-GAGATGCCCCTTCA----------------CGTCTCGGGGTCTTTTCCCCAttcttactgatttgtagaaattccttacatattcccgaggtctacctttcgttagttatgtcccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4326003 102 - 9440265 GG-GAGATGCCCCTTCA----------------CGTCtcggggtcttttccccattcttactgatttgtagaaattccttacatattcccgaggtctacctttcgttagttatgtcccc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16916676 102 - 21915920 GG-GAGATGCCCCTTCA----------------CGTTTCTGGGTCTTTTTCCCAttcttactgatttgtagaaattccttacatattcccgaggtctacctttcgttagttatgtcccc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 56383 102 - 21531802 GG-GAGATGCCCCTTCA----------------CATCTCAGGGTCTTTTTCCCAttcttactgatttgtagaaattccttacacattcccgaggtctacctttcgttagttatgtcccc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 80411 102 - 2515279 GG-GAGATGCCCCTTCA----------------CGTCTCTGGGTCTTTTTCCCAttcttactgatttgtagaaattccttacatattcccgaggtctacctctcattagttatgtcccc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 237383 102 + 6586416 GG-GAGACGCCCCTTCA----------------CGTCTGggggtctttttcccattctgactggtttatagaaatcccttacagattcccgaggtccacctttcgtcagctgtgtcccc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146603468 99 - 204313951 gg-gaaatgccccttca----------------tgtctcagggtctttttcccattcttcctgatt--tagaaattccttacatattcccgaggcccaccctttgttagttatgt-tgc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 312963 101 - 2409723 gg-gaaatgccccttca----------------tgtctcagggtctttttcccattcttcctgatttctagaaattccttacatattcctgaggcccaccctttgtttgttatgt-cgc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 448363 101 - 2125214 GG-GAAAtgccccttca----------------tgtctcagggtcttttttccattcttcctgatttatagaaattccttacatattcctgaggcccaccctttgttagttatgt-cac i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 62244 89 + 376347 GG-GAAATGCCCCTTCA----------------CGTCCCAAGGGC--TGTCCCGTCCCTCCTGATTTATAGAAAGTCC-TGCGTATCCCTGAGGCCCAGCCTttgttaa---------- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2181103 119 - 8137123 ggcaaaatgcctcttcagtcttccgcctggttttctatcagggtcttttacccgttcttactgatttatagaaattctttacatattcctgaggctaaccctttgttagttacgtactt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993077 0 - 77573801 C a score=6072963.000000 s hg38.chr7_KI270899v1_alt 82318 597 + 190869 ggtgag-tatcctctca-tttttagcttctctttcatttt-ctttgaggtta-tttttgaccaatag----tttttt--aaatgt--actcacattttatcagactcctattttatagccagggcttcttacaatgtatttaagaaatccttccctacagccaaggtcataaattgtccacctacattttccagacaaacttttaaaggaaaactctt-acataagttcttgccccatgtgggg----ctttgtgtatgttgggaaacagggatcttatttctttt-tccatatggaaaatcattttcccacaccCAGTGATTGCTCTGTTCTTGCGGGAAGGGAAACTCCACA-GGAGAACAGGGCAGCAGGGCCCCA-----------AGG-AAGGACGAGTGAG-GCCCAGCCCAGCTGCCTGCC------------------CCAGGAGTTGTGAAA--CTCCAGGATGAATTCAGCATGGAA------CAACTTTAATCCATTCTAATCTGAGGATAAAACTCAGAGAAGTCTTTGCTCC---------------------AGGTGAGGGTGCAGTTTGCACAATTAGCTAAATGCTGTCAGTACCAGGCTT--TGG-GATTTTCTGTTCTCCTTTCAGAGAAAAGGGCAGGGCAGGAAA-TGCGGGCACCAAAC s panTro5.chr7_NW_015973523v1_random 15687 597 - 29993 ggtgag-tatcttctca-tttttagcttctctttcatttt-ctttgaggtta-tttttgaccaatag----tttttt--aaatgt--gctcacattttatcagactcctattttatagccagggcttcttacagtgtatttaagaaatcgttccctacagccaaggtcataaattgtccacctacattttccagacaaacttttaaaggaaaactctt-acataagttcttgccccatctgggg----ctttgtgtatgttgggaaacagggatcttatttctttt-tccatatggaaaatcattttcccacacccagtgattgCTCTGTTCTTGCGGGAAGGGAAACTCCACA-GGAGAACAGGGCAGCAGGGCCCCA-----------AGG-AAGGACGAGTGAG-GCCCAGCCCAGCTGCCTGCC------------------CCAGGAGTTGTGAAA--CTCCAGGATGAATTCAGCATGGAA------CAACTTTAATCCATTCTAATCTGAGGATAAAACTCAGAGAAGTCTTTGTTCC---------------------AGGTGAGGGTGCAGTTTGCACAACTAGCTAAATGCTGTCAGTACCAGGCTT--TGG-GATTTTCTGTTCTCCTTTCAGAGAAAAGGGCAGGGCCGGAAA-TGTGGGCACCAAAC i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 6680 597 + 9642 ggtgag-tatcttctca-tttttagcttctctttcatttt-ctttgaggtta-tttttgaccaaaag----tttttt--aaatgt--actcacattttatcagactcctattttatagccagggcttcttacagtgtatttaagaaatccttccctacagccaaggtcataaattgtccacctacattttccagacaaacttttaaaggaaaactctt-acataagttcttgccccatctgggg----ctttgtgtatgttgggaaacagggatcttatttctttt-tccatatggaaaatcattttcccacacccagtgattgCTCTGTTCTTGCGGGAAGGGAAACTCCACA-GGAGAACAGGGCAGCAGGGCCCCA-----------AGG-AAGGACGAGTGAG-GCCCAGCCCAGCTGCCTGCC------------------CCAGGAGTTGTGAAA--CTCCAGGATGAATTCAGCATGGAA------CAACTTTAATCCATTCTAATCTGAGGATAAAACTCAGAGAAGTCTTTGTTCC---------------------AGGTGAGGGTGCAGTTTGCACAACTAGCTAAATGCTGTCAGTACCAGGCTT--TGG-GATTTTCTGTTCTCCTTTCAGAGAAAAGGGCAGGGCAGGAAA-TGTGGGCACCAAAC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 43665 596 - 432965 ggtgag-tatcttctca-tttttagcttctctttcattttcctttgaggtta-tttttgaccaatag-----ttttt--aaatgttaactcacattttatcagactcctattttatag-cagggcttcttacagtatatttaagaaatccttccctacagccaa-gtcataaattgtccacctacattttccagacaaacttttaaaggaaaactctt-acataagttcttgccccatctgggg----ctttgtgtatgtt-ggaaacagggatcttatttctttt-tccatatggaaaatcattttcccacaccCAGTGATTGCTCTGTTCTTGCGGGAAGGGAAACTCCACA-GGAGAACAGGGCAGCAGGGCCCCA-----------AGG-AAGGACGAGTGAG-GCCCAGCCCAGCTGCCTGCC------------------CCAGGAGTTGTGAAA--CTCCAGGATGAATTCAGCATGGAA------CAACTTTAATCCATTCTAATCTGAGGATAAAACTCAGAGAAGTCTTTGCTCC---------------------AGGTGAGGGTGCAGTTTGCACAATTAGCTAAATGCTGTCAGTACCAGGCTT--TGG-GGTTTTCTGTTCTCCTTTCACAGAAAAGGGCAGGGCAGGAAA-TGCGGGCACCAAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 99792 597 + 85365473 ggtgag-tatcttgtca-tttttagcttctctttcatttt-ctttgaggtta-tttttgaccaatag----tttttt--aaatgt--actcacatttgatcagactcctgttttatagccagggcttcttacagtgtatttaagaaatccttccctacagccaaggtcataaattgtccacctacattttccagacaaacttttaaagaaaaactctt-acgtaagttcttgccccatctgggg----ctttgtgtatgttgggaaacagggatcttatttctttt-tccatatggaaaatcattttcccacaccCAGTGATTGCTCTGTTCTTGCAGGAAGGGAAACTCCACA-GGAGAACAGGGCTGCAGGGCCCCA-----------AGG-AAGGACGAGTGAG-GCCCAGCCCAGATGCCCGCC------------------CCAGGAGTTGTGAAA--CTCCAGGATGAATTCAGCATGGAA------CGACTTTAATCCATTCTAATCTGAGGATAAGACTCAGAGAAGTCTTTGCTCC---------------------AGGTGAGGGTTCAGCTTGCATAATTAGCTAAATGCTGTCAGTACCAGGCTT--TGG-GGTTTTCTGTTCTCCTTTCACAGAACAGGGCAGGGCAGGAAA-CGCAGGCACCAAAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33948804 601 + 185818997 ggtgag-tatcttctca-tttttagcttctctttcacttt-ctttgaggtta--ttttgaccaatag-ttttttttt--taatgt--actcacagtttatcagactcctatttcatagccagggcttcctatagtgtatttaagaaacccttccctat-gccaagctcataaattgtccacctacactttccagccaaagttttaaaggaaaactctg-acataagttcttgccccgtctggggctggctttgtgtatgttgggaaatagggatctcatttctttt-tccacacggaaaatcattttcccacaccCAGTGACTGCTCTGTTCTTGTGGGAAGGGAAACCCCACA-GGAGAACAGGGCGGCAGGGCCCAA-----------GGG-AAGGACGAGTGAG-GGCCAGCCCAGATG-CTGCC------------------CCAGGAGTTGTGAAA--CTCTAGGATGAGTTCAGCCTGGAA------TGACTTTAATCCACTCTAATCTGAGGATAAAACTCGGAGAAGTCTTTGCTTC---------------------AGGTGAGTGTGCAGTTTGCACGATTAGCCAAATGCCGTCAGTACCAGGCTT--TGG-GGTTTTCTGTTCTCCTCTCACAGAAAAGGGTATGGCAGGCAA-TGCGGGCACCAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33565136 601 + 192294377 ggtgag-tatcttctca-tttttagcttctctttcacttt-ctttgaggtta--ttttgaccaatag-ttttttttt--taatgt--actcacagtttatcagactcctatttcatagccagggcttcctatagtgtatttaagaaacccttccctat-gccaagctcataaattgtccacctacactttccagccaaagttttaaaggaaaactctg-acataagttcttgccccgtctggggctggctttgtgtatgttgggaaatagggatctcatttctttt-tccacacggaaaatcattttcccacaccCAGTGACTGCTCTGTTCTTGTGGGAAGGGAAACCCCACA-GGAGAACAGGGCGGCAGGGCCCAA-----------GGG-AAGGACGAGTGAG-GCCCAGCCCAGATG-CTGCC------------------CCAGGAGTTGTGAAA--CTCTAGGATGAGTTCAGCCTGGAA------TGACTTTAATCCACTCTAATCTGAGGATAAAACTCGGAGAAGTCTTTGCTTC---------------------AGGTGAGTGTGCAGTTTGCACGATTAGCCAAATGCCGTCAGTACCAGGCTT--TGG-GGTTTTCTGTTCTCCTCTCACAGAAAAGGGTATGGCAGGCAA-TGCGGGCACCAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4326105 602 - 9440265 ggtgag-tatcttctca-tttttagcttctctttcacttt-ctttgaggtta--ttttgaccaatagtttttttttt--taatgt--actcacagtttatcagactcctatttcatagccagggcttcctatagtgtatttaagaaacccttccctat-gccaagctcataaattgtccacctacattttccagccaaagttttaaaggaaaactctg-acataagttcttgccccgtctggggctggctttgtgtatgttgggaaatagggatctcatttctttt-tccacacggaaaatcattttcccacaccCAGTGACTGCTCTGTTCTTGTGGGAAGGGAAACCCCACA-GGAGAACAGGGCGGCAGGGCCCAA-----------GGG-AAGGACGAGTGAG-GCCCAGCCCAGATG-CTGCC------------------CCAGGAGTTGTGAAA--CTCTAGGATGAGTTCAGCCTGGAA------TGACTTTAATCCACTCTAATCTGAGGATAAAACTCGGAGAAGTCTTTGCTTC---------------------AGGTGAGTGTGCAGTTTGCACGATTAGCCAAATGCCGTCAGTACCAGGCTT--TGG-GGTTTTCTGTTCTCCTCTCACAGAAAAGGGTATGGCAGGCAA-TGCGGGCACCAAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16916778 601 - 21915920 ggtgag-tatcttctca-tttttagcttctctttcacttt-ctttgaggtta--ttttgaccaatag-ttttttttt--taatgt--actcacagtttatcagactcctatttcatagccagggcttcctatagtgtatttaagaaacccttccctat-gccaaggtcataaattgtccacctacattttccagacaaagttttaaaggaaagctctg-acataagttctcgccccgtctggggctggctttgtgtatgttgggaaatagggatctcatttctttt-tccacatggaaaatcattttcccacaccCAGTGACTGCTCTGTTCTTGTGGGAAGGGAAACCCCACA-GGAGAACAGGGCGGCAGGGCCCAA-----------GGG-AAGGACGAGCGAG-ACCCAGCCCAGATG-CTGCC------------------CCAGGAGTTGTGAAA--CTCTAGGATGAGTTCAGCCTGGAA------TGACTTTAATCCACTCTAATCTCAGGATAAAACTCGGAGAAGTCTTTGCTTC---------------------AGGTGAGTGTGCAGTTTGCACGATTAGCCAAATGCCGTCAGTACCAGGCTT--TGG-GGTTTTCTGTTCTCCTCTCACAGAAAAGGGTATGGCAGGCAA-TGTGGGCACCAAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 56485 590 - 21531802 ggtgag-tatcttctca-ttttcagcttctctttcacctt-ctttgaggtta--ttttgaccaatag---ttttttt--taaagt--actcacattttatcagactcctatttcatagccagggcttcctatagtgtatttaagaaacccttccctat-gccaagatcataaattgtccacctacattttccagacaaggttttaaagaaaaactctg-acagaagttcttgccccgtctggggctgtctttgtgtatgttgtgaaatagggatctcatttctttt-tccacacggaaaatcattttcccacaccCAATGACTGCTCTGTTCTTGCGGCAAGGGAAACCCCACA-GGAGAACAGGACAGCAGGGCCCAA-----------GGG-AAGGACGAGTGAG-GCCCAGCCCAGACGCCTGCC------------------CCAGGAGTTGTGAAA--CTGTAGGATGAATTCAGCCTGGAA------TGACTTTAATCCACTCTAATCTGAGGATAAAACTCGGAGAAGTCTTTGCTCC---------------------AGGTGAGTGTGCAGTTTGCACGATTAGCTAAATGCTGTCAGTACCAGGCTT--TGG-GGTTTTCCGTTCTCCTCTC----------GTACGGCAGGCAA-TGTGGGCACCAAAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 80513 602 - 2515279 agtgag-tatcttctca-tttttagcttctctttcacttt-ctttgaggtta--ttttgaccaatagtttttttttt--taatgt--actcacagtttatcagactcctatttcatagccagggcttcctatagtgtatttaagaaacccttccctat-gccaaggtcataaattgtccacctacattttccagacaaagttttaaaggaaaactctg-acataagttcttgccccgtctggggctggctttgtgtatgttgggaaatagggatctcatttctttt-tccacacggaaaatcattttcccacaccCAGTGACTGCTCTGTTCTTGTGGGAAGGGAAACCCCACA-GGAGAACAGGGCGGCAGGGCCCAA-----------GGG-AAGGACGAGCGAG-GCCCAGCCCAGATG-CTGCC------------------CCAGGAGTTGTGAAA--CTCTAGGATGAGTTCAGCCTGGAA------TGACTTTAATCCACTCTAATCTGAGGATAAAACTCGGAGAAGTCTTTGCTTC---------------------AGGTGAGTGTGCAGTTTGCACGATTAGCCAAATGCCGTCAGTACCAGGCTT--TGG-GGTTTTCTGTTCTCCTCTCACAGAAAAGGGTATGGCAGGCAA-TGTGGGCACCAAAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 237485 601 + 6586416 ggtgag-tatcttctca-cttttagcctccctttcacttt-ctttgaggtta--ttttgaccaacag--tttttttt--taatgt--actcacattttatcagactcctatttcatagccagggcttcctatagtgtatttaagaaacccttccctgt-gccaaggtcataaattgtccacctacattttccagacaaagttttaaaggaaaactctg-acagaagttcttgccccgtctggggctggctttgtgtacgttgggaaatagggatctcatttctttt-tccatacggaaaatcattttcccacaccCAGTGACTGCTCTGTTCTTGTGGGAAGGGAAACCCCACT-GGAGAACAGGGCAGCAGGGCCCCG-----------GGG-AAGGACGAGCGAG-GCCCAGCCCAGACGCTTGCC------------------CCAGGAGTTGTGAAA--CTCCGGGATGAATTCAGCCTGGAA------TGACTTTAATCCACTCGAATCTGAGGATCAAACTCGGAGAAGTCTTTGCTCC---------------------CGGTGAGTGTGCAGTTTGCACAATGAGCTAAATGCCGTCAGTACCAGGCTT--TGG-GGTTTTCTGTTCTCCTCTCACAGAAAAGGGTACGGCAGGCAA-TGCGAGCCCCAAAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146603567 600 - 204313951 ggtgag-tatcttctca-tttttagcttctctttcatttt-ccttgaggtta-tttttgacaaacag---ttttttt--aaaagt--gctcaaattttaccagactcctatttcatagctagggcttcttacatcgtatttaagaaatccttccctat-gccaagctcataaaatgtccacttacattttccacagaaacttttaaaggaaaactctt-acataagttcttgatccatctgggactgactttgtgtatgttgggaaatagggatcctatttctttt-tccatatggaaaactgttttcccacccccagtggttgCTCTGTTCTTGTGGGAAGGGAAACTCCACC-AGAGAACAGGGCGGCAGGGCCCGA-----------GGGAAAGGATGAGCAAG-GCCCAGCCCAGAGCCCCGTC------------------CCGGGAGTTGCAACA--CTCTAGGATGAATTCAGCATGAAA------TGACTTGAATCCATCCTAATCTGAGGATAAAACGCAGAGACGTCTTTGCCCC---------------------GGGTGAGTGTGCAGTTTGCACAATTAGCTAAATGCTGTCACGACCAGAC----TGA-GGTTTTCTTTTATCCTTTCACAGAAAAGGGCAGGGCAGGCAG-GGTGGGGAGCAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 313064 602 - 2409723 ggtgagttatcttctca-tttttagcttctctttcatttt-cctcgaggtta-tttttgactaacag---ttttttttaaaaagc--gctcaaattttatcagactcctatttcacagctagggcttcttacatcatatttaagaaatccttccctac-gccgagatcataaaatgtccacttacattttcaacagaaacttttaaaggaaaactctt-acataagttcttgatccatctgggactgacgttgtgtatgttgggaaatggggatcctattccattt-tccatatggaaaactgtttccccgcccccagtggttgCTCTGTTCTTGTGGGAAGGGAAACTCCACC-AGAGAACAGGGTGGCAAGGCCCGA-----------GGG-AAGGATGAGTGAG-GCCCGGCCTAGAGCCCCGTC------------------CCACAAGTTGCAACA--CTCCAGGATGAATTCAACACAGAA------TGACTTGAATCCATCCTAATCTGAGGATAAAATGCAGAGATGTCTTCGCTCC---------------------GGGTGAGTGTGCAGTTTGCACAATTAGCTAAATGCTGTCAGTACCAGAC----TGA-GGTTTTCTTTCATCCTTTCACATAAAAGGGCAGGGCAGGCAG-TGTGGGCGGCAAAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 448464 602 - 2125214 ggtgaa-tatcttctcattttttagcttctccttcatttt-ccttgaggtta-tttttgactaacag---ttttttt--aaaagt--gctcaaattttatcagactcctgtttcatagctagggcttcttacgtcgtgtttgagaaatccttccctat-gccaagatcataaaatgtccacttacgttttccacagaaacttttaaaggaaaactcttaacataagttcttgatccaactgggactgaccttgtgtatgttgggaaatagggatcctatttctttt-tccatgtggaaaactgttttcccacccccagtggttgCTCTGTTCTTGTGGGAAGGGAAACTCCACC-GGAGAACAGAGTGGCAGGGCCCGA-----------GGGAAAGGATGAGCGAG-GCCCGGCCCAGAGCCCCATC------------------TCGGGAGTTGCAACA--CTCCAGGAAGAATTCAGCATGAAA------TGACTTGAATCCATCCTAATCTAAGGATAAAACGCAGAGACGTCTTCACTCT---------------------GGGTGAGTGTGCAGTTTGCATAATTAGCTAAATGCCGTCAGTACCAAAC----TGA-GGTTTTCTTTTATCCTTTCACAGAAAAGGGCAGGGCAGGCAG-TGTGGGCAGCAAAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 62333 592 + 376347 -------catctcctca-tttttagcttctctttcatttt-ccttgaggtta-tttctgactaacag---tttttttt-taaagt--gctcagattttatcagactcctatttcatagccagggcttcttacgtcgtatttaagaaatccttccctac-gccaagatcataaaatgtccacttacattttccatagaaacttttaaagggaaactctt-acagaagttgttgatccatctgggactgactttgtgtatgttgggaaatagggatcctatttctttt-tccatatggaaagctgttttcccaccgccaGTGGCTGTTCTGTTCTTGTGGGAAGGGAAACTC--CC-GGAGAACAGGGCAGCAGGGCCCGA-----------GGG-AAGGATGAGCGAG-GCCTGGCCCAGAGCCCCGTC------------------CCGGGAGTTGCAACA--CTCCAGGATGAATTCAGCACGAAA------CGACCTGAATCCATCCTAATCTGAGGGTAAAACTCAGAGACGCCTTCGCTCC---------------------GGGTGAGTGTGCAGTTTGCACAATTAGCTAAATGCTGTCGGTACCAGAC----TGA-CCTTTTCTTTTATCCTTTCACAGAAAAGGGCAGGGCAGGCAG-TGTGGGGAGCAAAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2181222 603 - 8137123 agtgaa-tatcttccca-tttctagcctcactttcacttt-ctttaaggtgattttttgatta--ag-----ttttt--tgaaac--attcaaattgtatc--actcct-----aaaagtagagcttc-----------ttaagaaatgcct-cctac-tctgaggccttaaattgttcacctacatgttctaggcaaagtttttaagacaaactctc-ccacaaggccttgatccatttgtgactgattttgtgtatgttgggaagtagggatcttatttcttttctccatatgaaaaaccattt-CCTACACCCGGTGATTACTCTGT--GTGTGGG-AGGGAAACCCCACA-GGAGAACAGGGCAGCAGGGCCCCA-----------GAG-AAGGACAAACCAGCGCCCAGCCCAGACGCCCACCCTGGGCAGGGCCCTGAGTCTGGGAGTTATGAAATTTTCCAGAATGAATTCAATGTGGGA-----TTGATTCCAATCCACCCTAATCTGAAGAATAAATGCTGAGAAGCCCTCACTTCC-------------------GGGGTGAGTGTGCAGTCTGCATAATCAGCTGAATGCCATGGACACTAGACCTGGGGG-GAGATTCTGTTATCCTTTCACTGAAAAGCCCAGGGCAGGCAGCTGTGGGCATCAAGT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60993077 605 - 77573801 TGTGAG-CAtc---tca-cctttaatttcttccccagttt-ctttatggtga--ttttcattgacag-----gtttt--taatgc--attcaaaa-gtattggtctcttattttataggtagagctctttagagcttacttaagaagttctt----ac-tccaaggtcccaaataattca--gacactttctaggcaaagttcttaagaacaccctga-attttagtcctggatccatgtggagcagattctgtgtgtgttgcgaagagagcaccccgcttccttt---------------------CCCACACCCTGTGATTGCTCTGTTTTTGCAGGAAGGAAAACCACACATGAAAAAAAGAGCAATTGGATCCCAAAACACCCTTGGAG-ATGGACAAAGGGC-TCCCAGCCCATATGTACACC------------------CTGGGCGATGTGAAATTCTCCAAAACAAAACCGGAGTGGGATTGGGTTGATTTCAATACACTGTAATCTGAAGAATAAACAC-GAGAAGCCCTTTCTTCCGGGGACGGGGGTGGGGGGGGTGGGGAGTGTGCAGTTTTCACAATCAGCTGCATGCCATGGATGCCAGATTT--TGGTGGTTTTTCTATTTCCTTCCATTGACAAGGTCAGGGTAGGAGC-TGAAGAAAGC---- i canFam3.chr6 C 0 C 0 a score=574034.000000 s hg38.chr7_KI270899v1_alt 82915 81 + 190869 TGAA-GTGGGTGTGCAC--GTGTGTGCTTCGCTATGGGTGTGACTGTATGTGTCTCCA------------TATGTGTGTCTGTGTGGACATTCAAG s panTro5.chr7_NW_015973523v1_random 16284 93 - 29993 TGAA-gtgggtgtgcat--gtgtgtgcttcgctatgggtgtgactgtgtgtgtctccatatgtgtgtctgtatgtgtgtctgtgtggacattcaag i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7277 93 + 9642 TGAA-GTGGGTGTGCAT--GTGTGTGCTTCGCTATGGgtgtgactgtgtgtgtctccgtatgtgtgtctgtatgtgtgtctgtGTGGACATTCAAG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44261 81 - 432965 TGAA-gtgggtgtgcgt--gtgtgtgcttcgctatgggtgtgactgtgtgtgtctccg------------tatgtgtgtctgtgtggacattcaag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100389 81 + 85365473 TGAA-GGGGGTGTGCAT--GTGTGTGCTTCGCTATGGGTGTGACTGTGTGTGTCTCCA------------TATGTGTGTCTGTGTGGACATTCAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949405 68 + 185818997 TGAA-GGGGGTGTGCAT--GTGTGTGCTTCTCTACG-------------GTGTGTCTG------------TATATATGTCTGTGTGTACATTCAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33565737 68 + 192294377 TGAA-GGGGGTGTGCAT--GTGTGTGCTTCTCTACG-------------GTGTGTCTG------------TATATATGTCTGTGTGTACATTCAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4326707 68 - 9440265 TGAA-GGGGGTGTGCAT--GTGTGTGCTTCTCTACG-------------GTGTGTCTG------------TATATATGTCTGTGTGTACATTCAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917379 69 - 21915920 TGAAGGGGGGTGTGCAT--GTGTGTGCTTCTCTACG-------------GTGTGTCTG------------TATGTGTGTCTGTGTGTACATTCAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57075 68 - 21531802 TGAA-GGGGGTGTGCAT--GTGTGTTCTTCTCTATG-------------GTGTGTCTG------------TATGTATGTCTGTGTGTACATTCAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81115 68 - 2515279 TGAA-GGGGGTGTGCAT--GTGTGTGCTTCTCTATG-------------GTGTGTCTG------------TATGTGTGTCTGTGTGTACATTCAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238086 68 + 6586416 TGAA-GGGGgtgtgcat--gtgtgtgcttctctatg-------------gtgtgtctg------------tgtgtgtgtctgtgtgtacattcaag i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604167 79 - 204313951 GGAA-GGCAgtgtacat--gtgtgtgtttctctgtgggtgtgactat--atgtgcctg------------tatgcatgtctgtgtgAACATTCAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 313666 77 - 2409723 AGAA-GGTGgtgtgcatgcgtgtgtgtttctctgtgggtgtgactat--atgtgtctg------------tatgtgtgtc----tggacattcaag i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 449066 81 - 2125214 GGAA-GGCGgtgtgcgtgtgtgtgtgtttctctgtgggtgtgactat--atgtgtctg------------tatgtgtgtctgtgtggacattcaag i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 62925 79 + 376347 GGAA-GGCGgtgtgcat--gtgtgtgtttctctgtgggtgtgactgt--gtgtgtctg------------tatgcatgtctgtgtggacattcaag i aotNan1.NW_018514293v1 C 0 I 221 s otoGar3.GL873611 2181825 65 - 8137123 TGAACAGGGAAGTGCAt--gtgtgtgc------------aagaacgcatgtgtacttc------------tctatgggtctgtctgggcat----- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C a score=234410.000000 s hg38.chr7_KI270899v1_alt 82996 43 + 190869 CATGTGTATGTGTCTTTCTGTGTCT---GCATGTGCACACGTGT--GT s panTro5.chr7_NW_015973523v1_random 16377 43 - 29993 catgtgtatgtgtctttctgtgtct---gcatgtgcacacgtgt--gt i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7370 43 + 9642 CATGTGTATGTGTCTTTCTGTGTCT---GCATGTGCACACGTGT--GT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44342 43 - 432965 catgtgtatgtgtctttctgtgtct---gcatgtgcacacgtgt--gt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100470 33 + 85365473 CATGTGTG--------TCTGTGTCT---GCATGTACACAC--GT--GT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949473 43 + 185818997 CCTGTGTATGTGTCTTTCTGTGTCT---GCATGTGCACGCATGT--GT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33565805 43 + 192294377 CCTGTGTATGTGTCTTTCTGTGTCT---GCATGTGCACGCATGT--GT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4326775 39 - 9440265 CCTG----TGTGTCTTTCTGTGTCT---GCATGTGCACGCATGT--GT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917448 43 - 21915920 CCTGTGTATGTGTCTTTCTGTGTCT---GCATGTGCACACATGT--GT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57143 39 - 21531802 CCTG----TGTGTCTTTCTGTGTCT---GCATGTGCACGCATGT--GT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81183 35 - 2515279 CCTG----TGTATGTGTCTG----T---GCATGTGCACGCATGT--GT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238154 43 + 6586416 cctgtgtttgtgtctttctgtatct---gcatgtgcacgcatgt--gt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604246 45 - 204313951 -ATGTATATGTGACTTTCTGTGTACGAAGAATGTGCACACATGTGT-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 313743 40 - 2409723 -atgtatatatgactttctgtgtat---gcatgtgcacacgtgt---- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 449147 40 - 2125214 -atgtatatgtgactttctgtgtat---gcatgtgcacacgtgt---- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2181890 10 - 8137123 ------------------------------------acgtgtgt--gt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I a score=169653.000000 s hg38.chr7_KI270899v1_alt 83039 24 + 190869 CTACGTGTGTGTGCATGTGTGCCT s panTro5.chr7_NW_015973523v1_random 16420 24 - 29993 ctacgtgtgtgtgcatgtgtgcct i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7413 24 + 9642 CTACGTGTGTGTGCATGTGTGCCT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44385 24 - 432965 ctacgtgtgtgtgcatgtgtgctg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100503 24 + 85365473 CTACATGTGTGTGCATGTGTGCCT i nomLeu3.chr20 C 0 I 4 s rheMac8.chr3 33949516 24 + 185818997 CTACGtgtgtgtgcatgtgtgcct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33565848 24 + 192294377 CTACGTGTGCGTGCATGTGTGCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4326814 24 - 9440265 CTACGTGTGTGTGCATGTGTGCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917491 24 - 21915920 CTACGTGTGTGTACATGTGTGCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57182 24 - 21531802 CTACGTGTGTGTGCATGTGTGCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81218 24 - 2515279 CTACATGTGTGTGCATGTGTGCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238197 24 + 6586416 ctatgtgtgtgtgcatgtgtgcct i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604291 16 - 204313951 CTATGTTCA--------TGTGCCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 449187 24 - 2125214 ctatgtgcatgtccctgtgtgcct i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2181900 20 - 8137123 ----ttatgtgggcatttgagctt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C a score=34762.000000 s hg38.chr7_KI270899v1_alt 83063 4 + 190869 GTGT s panTro5.chr7_NW_015973523v1_random 16444 4 - 29993 gtgt i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7437 4 + 9642 GTGT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44409 4 - 432965 gtgt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33949540 4 + 185818997 gtgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33565872 4 + 192294377 GTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4326838 4 - 9440265 GTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917515 4 - 21915920 GTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57206 4 - 21531802 GTGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81242 4 - 2515279 GTGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238221 4 + 6586416 gtgt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604307 4 - 204313951 GTGT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 449211 4 - 2125214 gtgt i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2181920 4 - 8137123 gtgt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e nomLeu3.chr20 100527 4 + 85365473 I a score=62185.000000 s hg38.chr7_KI270899v1_alt 83067 23 + 190869 ATATCTGTATAGCTGTGTGTGCA s panTro5.chr7_NW_015973523v1_random 16448 23 - 29993 atgtctgtatagctgtgtgtgca i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7441 23 + 9642 ATATCTGTATAGCTGTGTGTGCA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44413 23 - 432965 atatctgtatagctgtgtgtgca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100531 21 + 85365473 ATATCTGTACAGC--TGTGTGCA i nomLeu3.chr20 I 4 C 0 s rheMac8.chr3 33949544 11 + 185818997 --------ata----tgtgtgca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33565876 11 + 192294377 --------ATA----TGTGTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4326842 11 - 9440265 --------ATA----TGTGTGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917519 11 - 21915920 --------ATA----TGTGTGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57210 15 - 21531802 --------ATATCTGTGTGTGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81246 11 - 2515279 --------ATA----TGTGTGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238225 11 + 6586416 --------atc----tgtgtgtg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604311 23 - 204313951 ATATCtgtatgtctgtgtgtgca i calJac3.chr2 C 0 C 0 s cebCap1.NW_016107703v1 449215 23 - 2125214 atatctgtatgtctgtgtgtgca i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2181924 9 - 8137123 --------------gtgcataca i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C a score=59741.000000 s hg38.chr7_KI270899v1_alt 83090 9 + 190869 TGTGTGTCT s panTro5.chr7_NW_015973523v1_random 16471 9 - 29993 tgtgtgtct i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7464 9 + 9642 TGTGTGTCT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44436 9 - 432965 tgtgtgtct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100552 9 + 85365473 TGTGTGTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949555 9 + 185818997 tgtgtgtct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33565887 9 + 192294377 TGTGTGTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4326853 9 - 9440265 TGTGTGTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917530 9 - 21915920 TGTGTGTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57225 9 - 21531802 TGTGTGTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81257 9 - 2515279 TGTGTGTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238236 9 + 6586416 catgtgtct i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 449238 9 - 2125214 tatgtgtct i cebCap1.NW_016107703v1 C 0 I 101 s otoGar3.GL873611 2181933 6 - 8137123 tgtgca--- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e calJac3.chr2 146604334 0 - 204313951 C a score=281547.000000 s hg38.chr7_KI270899v1_alt 83099 65 + 190869 CTGTATG--TGTGCCTGTATGTCTATATGCATCTCTGTGTGCACATGCATCTCTATACATGTGTGCC s panTro5.chr7_NW_015973523v1_random 16480 65 - 29993 ctgtatg--tgtgcctgtatgtctatatgcatctctgtgtgcacatgcatctctatacatgtgtgcc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7473 65 + 9642 CTGTATG--TGTGCCTGTATGTCTATATGCATCTCTGTGTGCACATGAATCTCTATACATGTGTGCC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44445 65 - 432965 ctgtatg--tgtgcctgtatgtctatatgcatctctgtgtgcacatgcatctctatacatgtgtgcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100561 63 + 85365473 CTGTATG--TGTGCCTGTGTGTCTATATGCATCTCTGTGTGCACATGCATCTCTATAC--GTGTGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949564 57 + 185818997 c--------tgtgtctgtgtgtc--tatgtgtctgtgtgtGCACACACATCCCTATACATGTGTGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33565896 63 + 192294377 CTG--TA--TGTGTCTGTGTGTCTATATGTGTCTGTGTGTGCACACACATCCCTATACATGTGTGTC i macFas5.chr3 C 0 I 172 s macNem1.NW_012019910v1 4326862 60 - 9440265 CTG--TA--TGTGTCTGTGTGTCTATATGTGTCTGTGTGTGCACACACACCCCTATACATGTGT--- i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16917539 65 - 21915920 CTG--TATGTGTGCCTGTGTGTCTATATGTGTCTCTGTGTGCACACACATCCCTATACATGTGTGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57234 63 - 21531802 CTG--TG--TTTGACTGTGTGTCTATATGTGTCTCTGTGTGCACACGCATCTCTATACATGTGTGTC i chlSab2.chr28 C 0 I 24 s manLeu1.NW_012101810v1 81266 65 - 2515279 CTGTATG--TGTGCCTGTGTGTCTATATGTGTCTCTGTGTGCACACACATCCCTATACATGTGTGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238245 65 + 6586416 ctgtatg--tgtgcctgtgtgtctatatgtgtctctgtgtgcacacacatctctacatatgtgtgta i colAng1.NW_012117710v1 C 0 I 2 s otoGar3.GL873611 2181939 29 - 8137123 ----------gtgcacgtgtgcatatataca------cgtgcaca---------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=12384.000000 s hg38.chr7_KI270899v1_alt 83164 8 + 190869 CGTGTGCA s panTro5.chr7_NW_015973523v1_random 16545 8 - 29993 cctgtgca i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7538 8 + 9642 CGTGTGCA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44510 2 - 432965 ------ca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100624 8 + 85365473 TCTGTGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949621 8 + 185818997 TCTGTGCA i rheMac8.chr3 C 0 I 189 s macFas5.chr3 33566131 8 + 192294377 TGTGTGCA i macFas5.chr3 I 172 I 2 s macNem1.NW_012019910v1 4326923 8 - 9440265 TGTGTGCA i macNem1.NW_012019910v1 I 1 I 189 s cerAty1.NW_012002954v1 16917604 6 - 21915920 TCTGTG-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57321 6 - 21531802 TCTGTG-- i chlSab2.chr28 I 24 C 0 s manLeu1.NW_012101810v1 81331 6 - 2515279 TCTGTG-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238312 6 + 6586416 tgtgtg-- i colAng1.NW_012117710v1 I 2 C 0 s otoGar3.GL873611 2181968 8 - 8137123 cgtgtgcc i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=11986.000000 s hg38.chr7_KI270899v1_alt 83172 7 + 190869 TGTGCAC s panTro5.chr7_NW_015973523v1_random 16553 7 - 29993 tgtgcac i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7546 7 + 9642 TGTGCAC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44512 7 - 432965 tgtacac i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100632 7 + 85365473 TGTGCAC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33566141 5 + 192294377 TGTCT-- i macFas5.chr3 I 2 I 14 s cerAty1.NW_012002954v1 16917610 5 - 21915920 TGTGC-- i cerAty1.NW_012002954v1 C 0 I 2 s chlSab2.chr28 57327 7 - 21531802 TGTGCAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81337 7 - 2515279 TGTGCAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238318 7 + 6586416 tgcacac i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2181976 4 - 8137123 tgtg--- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e macNem1.NW_012019910v1 4326931 189 - 9440265 I e rheMac8.chr3 33949629 189 + 185818997 I e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=185244.000000 s hg38.chr7_KI270899v1_alt 83179 46 + 190869 GTGTG--------TTCATATGTGTATGTGTGTGCACATGCATGTCTGTATGTGT s panTro5.chr7_NW_015973523v1_random 16560 44 - 29993 gtgtg--------ttcatatgtgtatgtgtgtgcacacgcatgtctgtatgt-- i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7553 44 + 9642 GTGTG--------TTCATATGTGTATGTGTGTGCACACGCATGTCTGTGTGT-- i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44519 46 - 432965 gtgtg--------ttcgtatgtgtatgtgtgtgcacatgcacgtctgtatgtgt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100639 40 + 85365473 GTGCA--------TTCA------TATGTGTGTGCACATGCATGTCTGTATGTGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949818 46 + 185818997 GTGTG--------TCCATATGTGTGTATATGTGCACATGCATGTCTGTATGTGT i rheMac8.chr3 I 189 C 0 s macFas5.chr3 33566160 46 + 192294377 GTGTG--------TCCATATGTGTGTATATGTGCACATGCATGTCTGTATGTGT i macFas5.chr3 I 14 C 0 s macNem1.NW_012019910v1 4327120 46 - 9440265 GTGTG--------TCCATATGTGTGCATATGTGCACATGCATGTCTGTATGTGT i macNem1.NW_012019910v1 I 189 C 0 s cerAty1.NW_012002954v1 16917617 44 - 21915920 --ATG--------TTTGTATGTGTATGTGTGTGCACATGCATGTCTGTATGTGT i cerAty1.NW_012002954v1 I 2 I 278 s chlSab2.chr28 57334 52 - 21531802 --ACGCATCTCTATACATATGTGTCTGTGCATGCACATGTGTTTGTGTATGTGT i chlSab2.chr28 C 0 I 18 s manLeu1.NW_012101810v1 81344 44 - 2515279 --GTG--------TTTGTATGTGTATGTGTGTGCACATGCATGTCTGTATGTGT i manLeu1.NW_012101810v1 C 0 I 285 s colAng1.NW_012117710v1 238325 44 + 6586416 atgtg--------ttcatatgtgt--atgtgtgcacacgcatgtctgtatgtgt i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2181980 17 - 8137123 ---------------------------tgtatgcacatacatgt---------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=211681.000000 s hg38.chr7_KI270899v1_alt 83225 72 + 190869 GTGCGTGTGTTTCTGCATGTACATGTGCACATGCCTTCATATGCATATGTAGCTGTACCTGTGCATGTCCGT s panTro5.chr7_NW_015973523v1_random 16604 68 - 29993 ----gtgtgtttctgtatgtacatgtgcacatgtcttcatatgcatatgtagctgtgcctgtgcatgtccgt i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7597 68 + 9642 ----GTGTGTTTCTGTATGTACATGTGCACATGTCTTCATATGCATATGTAGCTGTGCCTGTGCATGTCCGT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44565 72 - 432965 gtgcatgtgtttctgtatgtgtgtgtgcacatgtcttcatatgcatatgtagctgtgcctgtgcatgtccgt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100679 70 + 85365473 GTGCACGTGTTTCTGTATGTGTGTGTGCAC--GTCTCTATATGTGTATGTATCTGTGCATGTGCATGTCTGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949864 68 + 185818997 GTGCATGTGTTTC----TATGTGTGTGCACATGTCTCCATATGTGTATGTAGCTGTGCATGTACATGTCTGT i rheMac8.chr3 C 0 I 20 s macFas5.chr3 33566206 68 + 192294377 GTGCATGTGTTTC----TATGTGTGTGCACATGTCTCCATATGTGTATGTAGCTGTGCATGTACATGTCTGT i macFas5.chr3 C 0 I 16 s macNem1.NW_012019910v1 4327166 68 - 9440265 GTGCATGTGTTTC----TATGTGTGTGCACATGTCTCCATATGTGTATGTAGCTGTGCATGTACATGTCTGT i macNem1.NW_012019910v1 C 0 I 20 s chlSab2.chr28 57404 72 - 21531802 ATGTGTGTGTTTCTGTATGTATGTGTGCACGTATCTCCATATGTGTATGTAGCTGTGCATGTGCATGCCTGT i chlSab2.chr28 I 18 C 0 s colAng1.NW_012117710v1 238369 64 + 6586416 ------gtgtttctg--tatgtatatgtgcatgtctccatatgtgtacgtagctgtgcatgtacatgcctgt i colAng1.NW_012117710v1 C 0 I 35 e otoGar3.GL873611 2181997 0 - 8137123 C e canFam3.chr6 60993682 0 - 77573801 C e manLeu1.NW_012101810v1 81388 285 - 2515279 I e cerAty1.NW_012002954v1 16917661 278 - 21915920 I e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=8415.000000 s hg38.chr7_KI270899v1_alt 83297 5 + 190869 GTCTA s panTro5.chr7_NW_015973523v1_random 16672 5 - 29993 gtcta i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7665 5 + 9642 GTCTA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44637 5 - 432965 gtcta i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100749 5 + 85365473 GTCTA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33566290 5 + 192294377 ATCTA i macFas5.chr3 I 16 C 0 s chlSab2.chr28 57476 5 - 21531802 GTCTG i chlSab2.chr28 C 0 I 27 e colAng1.NW_012117710v1 238433 35 + 6586416 I e otoGar3.GL873611 2181997 0 - 8137123 C e canFam3.chr6 60993682 0 - 77573801 C e manLeu1.NW_012101810v1 81388 285 - 2515279 I e cerAty1.NW_012002954v1 16917661 278 - 21915920 I e macNem1.NW_012019910v1 4327234 20 - 9440265 I e rheMac8.chr3 33949932 20 + 185818997 I e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=9710.000000 s hg38.chr7_KI270899v1_alt 83302 9 + 190869 TATGTGCA----C s panTro5.chr7_NW_015973523v1_random 16677 9 - 29993 tatgtgca----c i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7670 9 + 9642 TATGTGCA----C i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44642 13 - 432965 tatgtgcacatgc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100754 9 + 85365473 TATGTGCA----C i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33566295 9 + 192294377 TATATGCA----C i macFas5.chr3 C 0 C 0 s otoGar3.GL873611 2181997 4 - 8137123 -----aca----c i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 238433 35 + 6586416 I e canFam3.chr6 60993682 0 - 77573801 C e chlSab2.chr28 57481 27 - 21531802 I e manLeu1.NW_012101810v1 81388 285 - 2515279 I e cerAty1.NW_012002954v1 16917661 278 - 21915920 I e macNem1.NW_012019910v1 4327234 20 - 9440265 I e rheMac8.chr3 33949932 20 + 185818997 I e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=4360.000000 s hg38.chr7_KI270899v1_alt 83311 4 + 190869 ATAC s panTro5.chr7_NW_015973523v1_random 16686 4 - 29993 atgc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7679 4 + 9642 ATGC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44655 4 - 432965 atgc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100763 4 + 85365473 ATGT i nomLeu3.chr20 C 0 I 183 s rheMac8.chr3 33949952 4 + 185818997 ATAT i rheMac8.chr3 I 20 C 0 s macNem1.NW_012019910v1 4327254 4 - 9440265 ATAT i macNem1.NW_012019910v1 I 20 C 0 s otoGar3.GL873611 2182001 4 - 8137123 gagc i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 238433 35 + 6586416 I e canFam3.chr6 60993682 0 - 77573801 C e chlSab2.chr28 57481 27 - 21531802 I e manLeu1.NW_012101810v1 81388 285 - 2515279 I e cerAty1.NW_012002954v1 16917661 278 - 21915920 I e macFas5.chr3 33566304 0 + 192294377 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=7896.000000 s hg38.chr7_KI270899v1_alt 83315 3 + 190869 ATG s panTro5.chr7_NW_015973523v1_random 16690 3 - 29993 atg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7683 3 + 9642 ATG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44659 3 - 432965 atg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100950 3 + 85365473 ATG i nomLeu3.chr20 I 183 C 0 s rheMac8.chr3 33949956 3 + 185818997 ATG i rheMac8.chr3 C 0 I 2 s macNem1.NW_012019910v1 4327258 3 - 9440265 ATG i macNem1.NW_012019910v1 C 0 I 2 s otoGar3.GL873611 2182005 3 - 8137123 atg i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 238433 35 + 6586416 I e canFam3.chr6 60993682 0 - 77573801 C e chlSab2.chr28 57481 27 - 21531802 I e manLeu1.NW_012101810v1 81388 285 - 2515279 I e cerAty1.NW_012002954v1 16917661 278 - 21915920 I e macFas5.chr3 33566304 0 + 192294377 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=7425.000000 s hg38.chr7_KI270899v1_alt 83318 2 + 190869 CA s panTro5.chr7_NW_015973523v1_random 16693 2 - 29993 ca i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7686 2 + 9642 CA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44662 2 - 432965 ca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100953 2 + 85365473 CA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949961 2 + 185818997 CA i rheMac8.chr3 I 2 C 0 s macFas5.chr3 33566304 1 + 192294377 -A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327263 2 - 9440265 CA i macNem1.NW_012019910v1 I 2 C 0 s manLeu1.NW_012101810v1 81673 2 - 2515279 CA i manLeu1.NW_012101810v1 I 285 C 0 s otoGar3.GL873611 2182008 2 - 8137123 ca i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 238433 35 + 6586416 I e canFam3.chr6 60993682 0 - 77573801 C e chlSab2.chr28 57481 27 - 21531802 I e cerAty1.NW_012002954v1 16917661 278 - 21915920 I e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=18612.000000 s hg38.chr7_KI270899v1_alt 83320 3 + 190869 TGT s panTro5.chr7_NW_015973523v1_random 16695 3 - 29993 tgt i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7688 3 + 9642 TGT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44664 3 - 432965 tgt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100955 3 + 85365473 TGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949963 3 + 185818997 TGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33566305 3 + 192294377 TGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327265 3 - 9440265 TGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917939 3 - 21915920 TGT i cerAty1.NW_012002954v1 I 278 C 0 s manLeu1.NW_012101810v1 81675 3 - 2515279 TGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238468 3 + 6586416 tgt i colAng1.NW_012117710v1 I 35 C 0 s otoGar3.GL873611 2182010 3 - 8137123 tgt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e chlSab2.chr28 57481 27 - 21531802 I e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=97651.000000 s hg38.chr7_KI270899v1_alt 83323 18 + 190869 ATGTGTGCACGTGTGTCT s panTro5.chr7_NW_015973523v1_random 16698 18 - 29993 atgtgtgcacgtgtgtct i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7691 18 + 9642 ATGTGTGCATGTGTGTCT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44667 18 - 432965 atgtgtgcacgtgtgtct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100958 18 + 85365473 ATGTGTGCACGTGTGTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949966 18 + 185818997 ATGCATGCATGTGTGTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33566308 18 + 192294377 ATGCATGCATGTGTGTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327268 18 - 9440265 ATGCATGCATGTGTGTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917942 18 - 21915920 ATGCATGCATGTGTGTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57508 18 - 21531802 ACGTATGCATGCATGTCT i chlSab2.chr28 I 27 C 0 s manLeu1.NW_012101810v1 81678 18 - 2515279 ATGCATGCATGTGTGTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238471 18 + 6586416 atgcatgcatgtgtgtct i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2182013 17 - 8137123 gtgcgtgCA-GAGCTTAT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e saiBol1.JH378296 313783 0 - 2409723 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=163239.000000 s hg38.chr7_KI270899v1_alt 83341 31 + 190869 CTGCA----TGTGTGTGTATGTGTCTGTGTATAAG s panTro5.chr7_NW_015973523v1_random 16716 31 - 29993 ctgca----tgtgtgtgtgtgtgtctgtgtataag i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7709 31 + 9642 CTGCA----TGTGTGTGTATGTGTCTGTGTATAAG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44685 31 - 432965 ctgca----tgtgtgtgtatgtgtctgtgtataag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 100976 35 + 85365473 GTGCATGTGTGTGTGTGTATGTGTCTGTGTATAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33949984 35 + 185818997 GTGCATGTGTATGTGTATACATGTCTGTGTGTATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33566326 35 + 192294377 GTGCATGTGTATGTGTATACATGTCTGTGTGTATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327286 35 - 9440265 GTGCATGTGTATGTGTATACATGTCTGTGTGTATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917960 35 - 21915920 GTGCATGTGTATGTGTATACGTGTCTGTGTGTATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57526 35 - 21531802 GTGCATGTGTACTTGTGTACGTGTCTGTGTGTATG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81696 35 - 2515279 GTGCATGTGTATGTGTATACGTGTCTGTGTGTATG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238489 35 + 6586416 gtgcatgtgtatgtgtatacgtgtctgtgtgtacg i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 313783 31 - 2409723 ctgcatgtgcctgtgtatatttgtatgtctc---- i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2182030 31 - 8137123 CTGCAtgtgtgtgtgtatgtgtgtgagcacg---- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e cebCap1.NW_016107703v1 449247 101 - 2125214 I e calJac3.chr2 146604334 0 - 204313951 C a score=226535.000000 s hg38.chr7_KI270899v1_alt 83372 32 + 190869 TACGTGTCTACATGTCTGTATGTAGGTGCCTG s panTro5.chr7_NW_015973523v1_random 16747 32 - 29993 tacgtgtctacatgtctgtatgtaggtgcctg i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7740 32 + 9642 TACGTGTCTACATGTCTGTATGTAGGTGCCTG i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44716 32 - 432965 tacgtgtctacatgtctgtatgtaggtgcctg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 101011 32 + 85365473 TACGTGTCTACATGTCTGTATGTAGGTGCCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33950019 32 + 185818997 TACGTGTCTATATGTCTGTATGTAAATGCCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33566361 32 + 192294377 TACGTATCTATATGTCTGTATGTAAGTGCCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327321 32 - 9440265 TACGTGTCTATATGTCTGTATGTAAATGCCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16917995 32 - 21915920 TACGTGTCTATATGTCTGTATGTAAGTGCCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57561 32 - 21531802 TATGTGTCTATATGTCTGTATGTAAGCACCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81731 32 - 2515279 TACGTGTCTATATGTCTGTATGTAAATGCCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238524 28 + 6586416 tatgtgtctata----tgtatgtaagtgcctg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604334 32 - 204313951 tatgtgtctacatgtctatatgtatgtgcctg i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 313814 32 - 2409723 tgtgtgcatacgtgtctacatgtatgtgcctg i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2182061 16 - 8137123 ----------------tgtgtatgcatgcctg i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60993682 0 - 77573801 C e aotNan1.NW_018514293v1 63004 221 + 376347 I e cebCap1.NW_016107703v1 449247 101 - 2125214 I a score=510573.000000 s hg38.chr7_KI270899v1_alt 83404 89 + 190869 TGTGTACATGAGTGTATGTGTCT----------CTGG--GTGTGTGT----GGTACATGAGCAGGTATAGGTTTGTGCATGTGTATGAGTGTCTGC-----ATGTCTGTA s panTro5.chr7_NW_015973523v1_random 16779 89 - 29993 tgtgtacatgagtgtatgtgtct----------ctgg--gtgtgtgt----ggtacatgagcaggtataggtatgtgcatgtgtatgagtgtctgc-----atgtctgta i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7772 89 + 9642 TGTGTACATGAGTGTATGTGTCT----------CTGG--GTGTGTGT----GGTACATGAGCAGGTATAGGTATGTGCATGTGTATGAGTGTCTGC-----ATGTCTGTA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44748 89 - 432965 tgtgtacatgagtgtatgtgtct----------ctgg--gtgtgtgt----ggtacatgagcaggtataggtatgtgcatgtgtatgagtgtctgc-----atgtctgta i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 101043 85 + 85365473 TGTGTACATGAGTGTATGTGTCT----------CTGG--GTGTGTGT----GGCACATGAGCAGGTATAGGTGTGTGCATGTGTGTGAGTGCC---------TGTCTGTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33950051 79 + 185818997 TGTGTACATGAGTGTGTGTGTCT----------CTGG--GTGTGTGT----GGTACAAGAGCAGGTATAGGTATG------TGTATGAG----TGC-----ATGTCTGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33566393 75 + 192294377 TGTGTACATGA----GTGTGTCT----------CTGG--GTGTGTGT----GGTACAAGAGCAGGTATAGGTATG------TGTATGAG----TGC-----ATGTCTGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327353 79 - 9440265 TGTGTACATGAGTGTGTGTGTCT----------CTGG--GTGTGTGT----GGTACAAGAGCAGGTATAGGTATG------TGTATGAG----TGC-----ATGTCTGTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16918027 79 - 21915920 TGTGTACATGAGTGTGTGTGTCT----------CTGG--GTGTGTGT----GGTACAAGAGCAAGTATAGGTATG------TGTATGAG----TGC-----ATGTCTGTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57593 85 - 21531802 TGTGTACATGAGTGTGTGTGTCT----------CTGG--GTGTGTGT----GGTACAAGAGCAGGTGTAGGTATGTGCATATGTATGAG----TGC-----ATGTCTGTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81763 89 - 2515279 TGTGTACATGAGTGTGTGTGTCTCTGGGTGTCACTGG--GTGTGTGT----GGTACAAGAGCAAGTATAGGTATG------TGTATGAG----TGC-----ATGTCTGTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238552 90 + 6586416 tgtgtacatgagtg-gtgtgtct----------ctgggtgtgtgtgt----ggtacaagagcaggtataggtgtgtgcatgtgtatgagtgtctgc-----atgtctgta i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604366 84 - 204313951 tgtgtacatgagtgtatgtatct----------ttgt--gtg----t-----atacacgtgtaggtataggtatgtgcatgtgtacgagtgtctgc-----atgtctgta i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 313846 76 - 2409723 ggtgtacatgagtgtatatgtct----------gtgt--gtgtacat-----atacacatgcaggtgtaggtatgtgcatgtgtacgg-----------------ctgtg i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2182077 72 - 8137123 cttgtccatgtgtatacatgtgt----------gcat--gtgtgtg---------catgtacatgtacaaatgtg-------ccatgcttatctgc-----atgt----- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60993682 98 - 77573801 TGTGTGTTTCTGTGCATGTGTGC----------CTGG--GTGTCTGGCGTGGGCACAGAtgtgcgtgtgcgtgtgtgtgtgtgtgtgtgtgtgCGCGCCCGGTGTCTGCA i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 63004 221 + 376347 I e cebCap1.NW_016107703v1 449247 101 - 2125214 I a score=50790.000000 s hg38.chr7_KI270899v1_alt 83493 10 + 190869 TGTGTGTGCC s panTro5.chr7_NW_015973523v1_random 16868 10 - 29993 tgtgtgtgcc i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 7861 10 + 9642 TGTGTGTGCC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44837 10 - 432965 tgtgtgtgca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 101128 10 + 85365473 TGTGAGTGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33950130 8 + 185818997 TGT--GTGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33566468 8 + 192294377 TGT--GTGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327432 8 - 9440265 TGT--GTGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16918106 8 - 21915920 TGT--GTGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57678 8 - 21531802 TGT--GTGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81852 8 - 2515279 TGT--GTGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238642 8 + 6586416 tgt--gtgcc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604450 10 - 204313951 tgtgtgtggc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 313922 10 - 2409723 tgtgtgtgcg i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 63225 10 + 376347 tgtgtgtgcg i aotNan1.NW_018514293v1 I 221 I 8 s canFam3.chr6 60993780 10 - 77573801 TGTGCTCGCC i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2182149 0 - 8137123 C e cebCap1.NW_016107703v1 449247 101 - 2125214 I a score=158209.000000 s hg38.chr7_KI270899v1_alt 83503 37 + 190869 ----TGTGTGTGTGTGTGTATGTGT----CTG----TGTGTCTGTGGTT s panTro5.chr7_NW_015973523v1_random 16878 35 - 29993 ----tgtgtgtgtgtgtg--tgtgt----ctg----tgtgtctgtggtt i panTro5.chr7_NW_015973523v1_random C 0 I 2686 s panPan2.chrUn_NW_014023765v1 7871 33 + 9642 ----TGTGTGTGTGTG----TGTGT----CTG----TGTGTCTGTGGTT i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44847 21 - 432965 --------------------tgtgt----ctg----tgtggctgtggtt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 101138 37 + 85365473 ----TGTGTGCGTGTGTGTGTGTGT----ATG----TGTGTCTGTGGTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33950138 25 + 185818997 ----TGTG------------TGTGC----GTG----TGTGTCTGTGATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33566476 25 + 192294377 ----TGTG------------TGTGC----GTG----TGTGTCTGTGATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327440 25 - 9440265 ----TGTG------------TGTGC----GTG----TGTGTCTGTGATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16918114 29 - 21915920 ----TGTG------------TGTGC----GTGTGTATGTGTCTGTGATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57686 25 - 21531802 ----TGTG------------TGTGC----GTA----TGTGTCTGTGATT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81860 29 - 2515279 ----TGTG------------TGTGCGTGTGTA----TGTGTCTGTGATT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238650 29 + 6586416 ----tgtg------------tgtgc----gtgcgtacgtgtctgtgatt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604460 31 - 204313951 ----tgtgtgtgtg------tgtgt----gtg----tgcatctgtgtat i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 313932 31 - 2409723 ----tgtgcatgtg------tgtgt----gca----tgtatctgtgtat i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 449348 31 - 2125214 ----tgtgagtgtg------tgtgt----gca----tgtatctgtgtat i cebCap1.NW_016107703v1 I 101 C 0 s aotNan1.NW_018514293v1 63243 31 + 376347 ----tgtgcgtctg------tgtgt----gca----tgtgtctgtgtgt i aotNan1.NW_018514293v1 I 8 C 0 s otoGar3.GL873611 2182149 28 - 8137123 -----gtgtatg--------tgtgc----atg----tgcgtctgtgtgC i otoGar3.GL873611 C 0 I 8 s canFam3.chr6 60993790 29 - 77573801 TCCGAGTG------------TGTGC----ATA----CATGTCTCTGTCT i canFam3.chr6 C 0 C 0 a score=544785.000000 s hg38.chr7_KI270899v1_alt 83540 67 + 190869 GTGTGATGGGCTGACTTGGTGCTGTGAGGATA-AAGATGTGCTTCTCCAGGCCCTATGAGGCCCAACC s panPan2.chrUn_NW_014023765v1 7904 67 + 9642 GTGTGATGGGCTGACTTGGTGCTGTGAGGATA-AAGATGTGCTTCTCCAGGCCCTATGAGACCCCACC i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44868 67 - 432965 gtgtgATGGGCTGACTTGGTGCTGTGAGGATA-AAGATGTGCTTCTCCAGGCCCTATGAGGCCCCACC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 101175 67 + 85365473 GTGTGATGGGCTGACTTGCTGCTGTGAGGATA-AAGATGTGCTTCTCCAGGCCCTATGAGGCCCCACC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33950163 67 + 185818997 GTGTGATGGGCTCACTCGGTGCTGTAAGGATA-GGTCTGTGCTCCTCCAGGCCCTATGAGGCCCCACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33566501 67 + 192294377 GTGTGATGGGCTCACTCGGTGCTGTAAGGATA-GGTCTGTGCTCCTCCAGGCCCTATGAGGCCCCACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327465 67 - 9440265 GTGTGATGGGCTCACTCGGTGCTGTAAGGATA-GGTCTGTGCTCCTCCAGGCCCTATGAGGCCCCACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16918143 67 - 21915920 GTGTGATGGGCTCACTCGGTGCTGTGAGGATA-GGCCTGTGCTCCTCCAGGCCCTATGAGGCCCCACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57711 68 - 21531802 GTGTGATGGGCTGACTTGGTGCTGTGAGGGTAGGGCCTGCGCTCCTCCAGGCACTATGAGGCCCCACC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81889 67 - 2515279 GTGTGATGGGCTCACTCGGTGCTGTGAGGATA-GGCCTGTGCTCCTCCAGGCCCTATGAGGCCCCACC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238679 67 + 6586416 gtgtgATGGGCTGACTCGGTGCTGTGAGGATA-GGCCTGTGCTCCTCCAGGCCCTATGAGGCTCCACC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604491 67 - 204313951 gtgCGATGCCCTGACTTGGTGCTGTGAGGATA-ATAATGCACTTCTCCAGGGCTTATGAAGCCCCTTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 313963 67 - 2409723 gtgCGGTGCGCTGACTTGGTGCCGTGAGGTTA-AGGATGCACTTCTCCAGGGCCTATGAGGCCCCTTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 449379 66 - 2125214 gtgCGATGCGCTGACTTGGTGCTGTGAGG-TA-AGGATGCACTTCTCCAGGGCCTATGAGGCCCCTTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 63274 67 + 376347 gtgtgATGCACTGACTTGGTGCTGTGAGGATA-CGGATGTGCTTCTCCAGGGTCTATGAGGCCCCTTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2182185 65 - 8137123 GGGTGATGGGCTGAGCTGGCATAACGAGGATC-AGCGTGTGCTGCTCCAGGGCCCAGGAGGCCCTC-- i otoGar3.GL873611 I 8 C 0 s canFam3.chr6 60993819 49 - 77573801 --------GACAGAGCTGCTG----------G-TAGATTTTCCACTCCAGACCCAGCTAGGCCCCTTC i canFam3.chr6 C 0 C 0 e panTro5.chr7_NW_015973523v1_random 16913 2686 - 29993 I a score=14044430.000000 s hg38.chr7_KI270899v1_alt 83607 1458 + 190869 -CCCTGAGCATA----GGGAGACCTGCCCTCACAT-TTTGTGTGGAGAACAGCAGGTGAGGGTGGGCA-CTGGAGTGCAGAT-GGC--GGGAGGGCGGCCTCAGCCTGTGGAGTCTGCAGAGGGGATGGGGGTGTGTGCTCCCAGAGCTGTGCT-CTTTTCCTTTTGGAGGCAGATTCCGTATCCTAAGCTGGAGTTCAGTTCTGA--------------GGCTT-----TGGGTCCAAAACCT---CAGTTGTAGGGTCAGGAGCAGGGGCACCAGGTCTGGGGACAGAACGTCGGCAGGTGGC-TCCTGTCTCGTGC-AGATGTGGTGCCTGCCTCACCCCATTCTCTGCCAGGACCCT--GCAGGTTCGGATGCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTGTCCTCCCAGGCA-CGCCCCACCTCCAGCCCTG------GGCTCACCCCAACCA-----------TCACT-----TCAGGCAGGAGAGTCCCCATTTGTGGCTACTAG------------TTCATTCATTCATTCAGAAGGGCCCTGG---CCATCAGCCA-CCCTCAGAGCGGAGTGCAGCTCCACCACTT-CGGCCAGGTGACCCTAGTCATGTTCA---------------------------------------------------TGAATCT-CCCAGCCTCTGATCCCACCTCTCTCAGTGGGGCAACAGCACCCGGTGTGCAGGGTGGCGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGTTCCTGGGTCCT-GGGCATC-TGAACTGGCTGCACTCGGAAACCCCAGTGCAAAT-GGGGCAGAGCAACAGTGCGTCTGTGGCAATGGTCCTGGGAGCAACGGTACGTCTGTGGCAACGGTCCTGGG--CCCACAGCACGGTCCCAGGCATTCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGCGGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTAGAATTAAACCTGGCATTTGAATGCAATCATGAAGAGAGGGGAGCTCCTCTGTCAGCC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATGTTAATTCCCCTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGGGGGAGCACGCAGTTTTCTATAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTGTGACCA-AGTGGGTG-AAAATAGCAAGTCATTAAAAACGAGCATCTTGAATGCCCATCTTTCAATAACGTAGACGGAAAGTGCTGGAATGAAGAGATTA-------------GGGAATTAATTGTATTGAGGATCCTCTCACTAGCAGACCCCAGGGCAGGAAAAGTGTCTGGCCACCTGCCAGGACCATACAATGGGATTAT------------------------------------------------GTGGGCCCCAAGAGAAGGAACCTGGCTGGACACCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGATTTTTGGAACCTGAAAGCAC-TGA-GGTCTTAAATCA s panTro5.chr7_NW_015973523v1_random 19599 1453 - 29993 -CCCTGAGCATA----GGGAGACCTGCCCTCACAT-TTTGTGTGGAGAACAGCAGGTGAGGGTGGGCA-CTGGAGTGCAGAT-GGC--GGGAGGGTGGCCTCAGCCTGTGGAGTCTGCAGAGGGGATGGGGGTGTCTGCTCCCAGAGCTGTGCT-CTTTTCCTTTTGGAGGCAGATTCCGTATCCCAAGCTGGAGTTCAGTTCTGA--------------GGCTT-----TGGGTCCAAAACCTTCTCACTTGTAGGGTCAGGAGCAGGGGCACCAGGTCTGGGGACAGAACGTCGGCAGGTGGC-TCCTGTCTCGTGC-AGATGTGGTGCCTGCCTCACCCCATTCTCTGCCAGGACCCT--GCAGGTTCGGATGCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTGTCCTCCCAGGCA-CGCCCCACCTCCAGCCCTG------GGCTCACCCCAACCA-----------TCACT-----TCAGGCAGGAGAGTCCCCATTTGTGGCTACTAG------------TTCATTCATTCATTTAGAAGGGCCCCGG---CCATCAGCCA-CCCTCAGAGCGGAGTGCAgctccaccactt-cggccaggtgaccctagtcacgttca---------------------------------------------------tgaatct-cccagcctctgatcccacctctctcagtggggcaacagcacccggtgcgcagggtGGCGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAACTGGCTGCACTCGGAAACCCCAGTGCAAAT-GGGGCAGAGCAACAGTGCGTCTGTGGCAATGGTCCTGGGAGCAACGGTACGTCTGTGGCAACGGTCCTGGG--CCCACAGCACAGTCCCAGGCATTCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAG-CCCTCTCCACACTCAGAGGAGGCGGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTAGAATTAAACCTGGCATTTGAATGCAATCATGAAGAGA-GGGAGCTCCTCTGTCAGCCAAGCAGGACACGATGAAAATCCAATTAAGTTGT-CGTG-TAATT-CCCTGCCTGCCTGGGCTCATTGCTGGATGA-GGAGTGGGAGCACGCAGTTTTC-ATAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTGTGA-CA-AGTGGGTG-AAAATAGCAAGTCATTAAAAACGAGCATCTTGAATGCCCATCTTTCAATAACGTAGACGGAAAGTGCTGGAATGAAGAGATTA--------------GGAATTAATTGTATTGAGGATCCTCTCACTAGCAGACCCCAGGGCAGGAAAAGTGTCTGGCCACCTGCCAGGACCATACAATGGGATTAT------------------------------------------------GTGGG-CCCAAGAGAAGGAACCTGGCTGGACAGCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGATTTTTGGAACCTGAAGCAACATGA-GGTCTTAAATCA i panTro5.chr7_NW_015973523v1_random I 2686 C 0 s panPan2.chrUn_NW_014023765v1 7971 1461 + 9642 -CCCTGAGCATA----GGGAGACCTGCCCTCACAT-TTTGTGTGGAGAACAGCAGGTGAGGGTGGGCA-CTGGAGTGCAGAT-GGC--GGGAGGGTGGCCTCAGCCTGTGGAGTCTGCAGAGGGGATGGGGGTGTCTGCTCCCAGAGCTGTGCT-CTTTTCCTTTTGGAGGCAGATTCCGTATCCCAAGCTGGAGTTCAGTTCTGA--------------GGCTT-----TGGGTCCAAAACCTTCTCACTTGTAGGGTCAGGAGCAGGGGCACCAGGTCTGGGGACAGAACGTCGGCAGGTGGC-TCCTGTCTCGTGC-AGATGTGGTGCCTGCCTCACCCCATTCTCTGCCAGGACCCT--GCAGGTTCGGATGCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTGTCCTCCCAGGCA-CGCCCCACCTCCAGCCCTG------GGCTCACCCCAACCA-----------TCACT-----TCAGGCAGGAGAGTCCCCATTTGTGGCTACTAG------------TTCATTCATTCATTTAGAAGGGCCCCGG---CCATCAGCCA-CCCTCAGAGCGGAGTGCAgctccaccactt-cggccaggtgaccctagtcacgttca---------------------------------------------------tgaatct-cccagcctctgatcccacctctctcagtggggcaacagcacccggtgcacagggtGGCGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCTGGGGCATC-TGAACTGGCTGCACTCGGAAA-CCCAGTGCAAAT-GGGGCAGAGCAACAGTGCGTCTGTGGCAATGGTCCTGGGAGCAACGGTGCGTTTGTGGCAATGGTCCTGGG--CCCACAGCACAGTCCCAGGCGTTCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGCGGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTAGAATTAAACCTGGCATTTGAATGCAATCATGAAGAGACGGGAGCTCCTCTGTCAGCC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATGTTAATTCCCCTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGTGGGAGCACGCAGTTTTCCATAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTGTGACCA-AGTGGGTG-AAAATTGCAAGTCATTAAAAACGAGCATCTTGAATGCCCATCTTTCAATAACGTAGACGGAAAGTGCTGGAATGAAGAGATTA-------------GGGAATTAATTGTATTGAGGATCCTCTCACTAGCAGACCCCAGGGCAGGAAAAGTGTCTGGCCACCTGCCAGGACCATACAATGGGATTAT------------------------------------------------GTGGGCCCCAAGAGAAGGAACCTGGCTGGACAGCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGATTTTTGGAACCTGAAAGCAC-TGA-GGTCTTAAATCA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 44935 1458 - 432965 -CCCTGAGCATA----GGGAGACCTGCCCTCACAT-TTTGTGTGGAGAACAGCAGGTGAGGGTGGGCA-CTGGAGTGCAGAT-GGC--GGGAGGGCGGCCTCAGCCTGTGGAGTCTGCAGAGGGGATGGGGGTGTCTGCTCCCAGAGCTGTGCT-CTTTTCCTTTTGGAGGCAGATTCCATATCCTAAGCTGGAGTTCAGTTCTGA--------------GGCTT-----TGGGTCCAAAACCTTCTCAGTTGTAGGGTCAGGAGCAGGGGCACCAGGTCTGCGGACAGAACGTCGGCAGGTGGC-TCCTGCCTCATGC-AGATGTGGGGCCTGACTCA-CCCATTCTCTGCCAGGACCCT--GCAGGTTCGGATGCACATCAGGGACTGTGGCT-CCACCTTCCCTGCTCCTAACTCTTCTGTCCTCCCAGGCA-CGCCCCACCTCCAGCTCTG------GGCTCA-CCCAACCA-----------TCACT-----TCAGGCAGGAGAGTCCCCATTTGTGGCTACTAG------------TTCATTCATTCATTCAGAAGGGCCCCGG---CCATCAGCCA-CCCTCTGGGTGGAGTGCAGCTCCACCACTT-CGACCAGGTGACCCTAGTCACGTTCA---------------------------------------------------TGAATCT-CCCAGCCTCTGATCCCACCTCTCTCAGTGGGGCAACAGCACCCAGTGCGCAGGGTGGCGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAACTGGCAGCACTCAGAAATCCCAGTGCAAAT-GGGGCAGAGCAATGGTGCATCTGTGGCAACGGTCCTGGGAGCAACGGTGCGTCTGTGGCAATGGTCCTGGG--CCCACAGCACAGTCCCGGGCATTCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGCGGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTAGAATTAAACCTGGCATTTGAATGCAATCGTGAAGAGAGGGGAGCTCCTCTGTCAGCC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATGTTAATTCCCCTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGGGGGAGCACGCGGTTTTCTATAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTGTGACCA-AGTGGGTG-AAAATAGCAAGTCATTAAAAACGAGCATCTTGAATGCCCATCTTTCAATAACGTAGACGGAAAGTGCTGGAATGAAGAGATTT-------------GGGAATTAATTGTATTGAGGATCCTCTCACTAGCAGACCCCAGGGCAGGAAAAGTGTCTGGCCACCTGCCAGGACCATACAATGGGATTAT------------------------------------------------GTGGGCCCCAAGAGAAGGAACCTGGCTGGACACCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGATTTTTGGAACCTGAAAGCAC-TGA-GGTCTTAAATCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 101242 1423 + 85365473 -CCCTGAGCATA----GGGAGATCTGCCCTCATGT-TTTGTGTGGAGAACAGTGGGTGAGGGTGGGCA-CTGGAGTGCAGGT-GGC--AG--GGGTGGCCTCAGCCTGTGGGGTCTGCAGAGGGGAT-GGGGCATCGGCTCC--AAGTCGTGCT-CTTTTCCCTTCGGAGGCAGATTCCACTCCCTAAGCTGGAGTTCAGTTCTGA--------------GGCTT-----TGGGTCCAAAACCTTCTCCACTGTAGGGTCAGGAACA-GGGCTCCAGGTCTGGGGACAGAACGTCGGCAGCTGGC-TCCTGTCTCGTGC-AGATGTGGTGCCTGCCTCACCCCATTCTCTGCCAGGACACT--GCAGGTTCGGA-GCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTGTCCTCCCAGGCA-CCCCCTACCTCCAGCCCTG------GGCTCACCCCAACCA-----------TCACT-----TCCGGCAGGAGAGTCCCCATTTGTGG-TACTAG------------TTCATTCATTCATTCAGAAGGTCCCTGG---CCATCAGCCA-GCCTCAGGGCGGACTGCAGCTCCACCACTTCCGGCCAGGTGATCCTAGTCACGTTCA---------------------------------------------------TGAATCT-CCCAGCCTCTGATCCCACCTCTCTCAGTAGGGCAACAGCACCCAGTGCGCAGGGTGGCGGCCAAGGGTGGCCGTGGAGTG-----------------------------------AG--GCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAACCGGCTGCACTCGGAAACCCCAGGGCAAAT-CGGGCAGAGCAACAGTG--------------------------------CGTCTGCGGCAACGGTCCTGGG--CCCACGGCACAGTACTGGGCATTCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGCAGAGAGGCTGGAAGTGTCTCTTAATTAACTGTTTACTGCAAAATGCCTTTCACCTTCCAAGCTGCAGTCTTAGAATTAAACCCAGCATTCGAATGCAATCATGAAGACAGGGGAGCTCCTCTGTCAGCC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCTGGATGAGGCAGAGGGAGCACGCAGTTTTCTGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTAACAATAAAACCCAACAGAGCAGTGACCA-AATGGGTG-AAAATAGCAAGTCATTAAAAACAAGCATCTTGAATGCCCATCTTTCAATAATGTAGACGGAAAGTGCTGGAATAAAGAGATTA-------------GGGAATTAATTGTATTGAGGATCCTCTCACTAACAGACCCCAGGGCAGGAAAAGTTTCTGGCCACCTGCCAGGATCATACGATGGGATTAC------------------------------------------------GTGGGCCCCAAGAGAAGGGACCTGGCTGGACACCC---CTGTTGGTTCAGCAGG-GAAACCAGCCCAGATTTTTGGAACCTGAAAGCAC-TGA-GGCCTTAAATCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33950230 1411 + 185818997 -CCCTGAGCGTA----GGGAGACCTGCCCTCACAT-TGTGTGTGGAGAACAGTGGGTGGGGGAGGGCA-CTGGAGTGCAGATCGGC--GGGGGGGCGGCCTTAGCCCATGGTGTCTGCAGAGGGGATGGGGGCATCTGCTCCCGGAACCACACT-CTTTTTCCTTCGGAGGCAGATTCCATATCCTCAGCTGGAGTTCAGTGCTGA--------------GGCTT-----TAAGTCCAAAAC---CTCAGTTGTAGGGTCAGGAGCAGGGGCTCCAGGTCTGGGGCCAGAACGTCGGCAGGTGGC-TCCCGTCTCGTGC-AGATGTGGTGCCTGCATCACCCCATTCTCTGCCAGGACCCT--GCAGGTTCAGATGCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTGCCCTCCCAGGCA-CCCCCCACCTCCAGTCCTG------GGCTCACCCCAGCCA-----------TCACT-----TCAGGCAGGAGAGTCCC------------------------------CATTCATTCATTCAGAAAGGCTCTGG---CCATCCGCCA-GGCTCAGGGCAGAGTGCAGCTCTACCACTTCCAGCCAGGTGATCCTAGTCGCGTTCA---------------------------------------------------TGAATCT-CCCAGCCTCAGATCCTACCTCTCTCAGTGAGGCAACAGCACCTGGTACCCAGGGTGGTGGCCCAGGGTGGCCATGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAATTGGCTGCACTCAGAAAATCCAGTGCAAAT-GGGGCAGAGCAGCAGTG--------------------------------CGTTTGCGGCAATGGTCCTGGG--TCCACAGCACAGTCCCGGGCATCCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGTGGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTCGAATTAAACCTGGCATTTGAATGCAATAATGAAGAGAGGGGAGCTCCTCTGTCAGCC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGAGGGAGCACGCAGTTTTCAGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTGTGACCA-AATGGGTGCAAAATAGCGAGTCACTAAAAACGAGCATCGTGAATGCCCGTCTTTCAATACCAGAGACGGAAAGTGCTGGAATAAAGAGATTA-------------AGGAATTAATTGTATTTAGGATGCTCTCACTAGCAGACCCCAGTGCAGGAAAAGTTCCTGGCCACCTGCCAGGACCACACAATGGGATTAT------------------------------------------------GTGGGCCCCAGGAGAAGGAACCTGGCTGGACACCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGACGTTTGGAACCTGAAAGCAC-TGA-GGTCTTAAGTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33566568 1411 + 192294377 -CCCTGAGCGTA----GGGAGACCTGCCCTCACAT-TGTGTGTGGAGAACAGTGGGTGGGGGCGGGCA-CTGGAGTGCAGATCGGC--GGGGGGGCGGCCTTAGCCCATGGTGTCTGCAGAGGGGATGGGGGCATCTGCTCCCGGAACCACACT-CTTTTTCCTTCGGAGGCAGATTCCATATCCTCAGCTGGAGTTCAGTGCTGA--------------GGCTT-----TAAGTCCAAAAC---CTCAGTTGTAGGGTCAGGAGCAGGGGCTCCAGGTCTGGGGCCAGAACGTCGGCAGGTGGC-TCCCGTCTCGTGC-AGATGTGGTGCCTGCATCACCCCATTCTCTGCCAGGACCCT--GCAGGTTCAGATGCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTGCCCTCCCAGGCA-CCCCCCACCTCCAGTCCTG------GGCTCACCCCAGCCA-----------TCACT-----TCAGGCAGGAGAGTCCC------------------------------CATTCATTCATTCAGAAAggctctgg---ccatccgcca-ggctcagggcagagtgcagctctaccacttccagccaggtgatcctagtcgcgttca---------------------------------------------------tgaatct-cccagcctcagatcctacctctctcagtgaggcaacagcacctggtacccagggtggtGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAATTGGCTGCACTCAGAAAATCCAGTGCAAAT-GGGGCAGAGCAACAGTG--------------------------------CGTTTGCGGCAATGGTCCTGGG--TCCACAGCACAGTCCAGGGCATCCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGTGGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTCGAATTAAACCTGGCATTTGAATGCAATAATGAAGAGAGGGGAGCTCCTCTGTCAGCC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGAGGGAGCACGCAGTTTTCAGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTGTGACCA-AATGGGTGCAAAATAGCGAGTCACTAAAAACGAGCATCGTGAATGCCCGTCTTTCAATACCAGAGACGGAAAGTGCTGGAATAAAGAGATTA-------------AGGAATTAATTGTATTTAGGATGCTCTCACTAGCAGACCCCAGTGCAGGAAAAGTTCCTGGCCACCTGCCAGGACCACACAATGGGATTAT------------------------------------------------GTGGGCCCCAGGAGAAGGAACCTGGCTGGACACCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGACGTTTGGAACCTGAAAGCAC-TGA-GGTCTTAAGTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4327532 1410 - 9440265 -CCCTGAGCGTA----GGGAGACCTGCCCTCACAT-TGTGTGTGGAGAACAGTGGGTAGGAGCGGGCA-CTGGAGTGCAGATCGGC--GGGGGGGCGGCCTTAGCCCATGGTGTCTGCAGAGGGGATGGGGGCATCTGCTCCCGGAACCACACT-CTTTTTCCTTCGGAGGCAGATTCCATATCCTCAGCTGGAGTTCAGTGCTGA--------------GGCTT-----TAAGTCCAAAAC---CTCAGTTGTAGGGTCAGGAGCAGGGGCTCCAGGTCTGGGGCCAGAACGTCGGCAGGTGGC-TCCCGTCTCGTGC-AGATGTGGTGCCTGCATCACCCCATTCTCTGCCAGGACCCT--GCAGGTTCAGATGCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTGCCCTCCCAGGCA-CCCCCCACCTCCAGTCCTG------GGCTCACCCCAGCCA-----------TCACT-----TCAGGCAGGAGAGTCCC------------------------------CATTCATTCATTCAGAAAggctctgg---ccatccgcca-ggctcagggcagagtgcagctctaccacttccagccaggtgatcctagtcgcgttca---------------------------------------------------tgaatct-cccagcctcagatcctacctctctcagtgaggcaacagcacctggtacccagggtggtGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAATTGGCTGCACTCAGAAAATCCAGTGCAAAT-GGGGCAGAGCAACAGTG--------------------------------CGTTTGCGGCAATGGTCCTGGG--TCCACAGCACAGTCCTGGGCATCCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGTAGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTCGAATTAAACCTGGCATTTGAATGCAATAATGAAGAGAGGGGAGCTCCTCTGTCAGCC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGAGGGAGCACGCAGTTTTCAGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTGTGACCA-AATGGGTGCAAAATAGCGAGTCACTAAAAACGAGCATCGTGAATGCCCGTCTTTCAATACCAGAGACGGAAAGTGCTGGAATAAAGAGATTA-------------AGGAATTAATTGTATTTAGGATGCTCTCACTAGCAGACCCCAGTGCAGGAAAAGTTCCTGGCCACCTGCCAGGACCACAC-ATGGGATTAT------------------------------------------------GTGGGCCCCAGGAGAAGGAACCTGGCTGGACACCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGACATTTGGAACCTGAAAGCAC-TGA-GGTCTTAAGTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16918210 1414 - 21915920 -CCCTGAGCGTA----GGGAGACCTGCCCTCACAT-TGTGTGTGGAGAACAGTGGGTGGGGGCGGGCA-CTGGAGTGCAGATCGGC--GGGGGGGCGGCCTTAGCCCATGGTGTCTGCAGAGGGGATGGGGGCATCTGCTCCCGGAGCCACACT-CTTTTTCCTTCGGAGGCAGATTCCATATCCTCAGCTGGAGTTCAGTGCTGA--------------GGCTT-----TGAGTCCAAAACCTTCTCAGTTGTAGGGTCAGGAGCAGGGGCTCCAGGTCTGGGGCCAGAACGTCGGCAGGTGGC-TCCCGTCTCGTGC-AGATGTGGTGCCTGCATCACCCCATTCTCTGCCAGGACCCT--GCAGGTTCAGATGCATATCAGAGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTGCCCTCCCAGGCA-CCCCCCACCTCCAGTCCTG------GGCTCACCCCAGCCA-----------TCACT-----TCAGGCAGGAGAGTCCC------------------------------CATTCATTCATTCAGAAAGGCTCTGG---CCATCTGCCA-GGCTCAGGGCAGAGTGCAGCTCTACCACTTCCAGCCAGGTGATCCTAGTCGCATTCA---------------------------------------------------TGAATCT-CCCAGCCTCAGATCCTACCTCTCTCAGTGAGGCAACAGCACCCGGTACCCAGGGTGGTGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAATTGGCTGCACTCAGAAAATCCAGTGCAAAT-GGGGCAGAGCAACAGTG--------------------------------CGTTTGCGGCAATGGTCCTGGG--TCCACAGCACAGTCCCGGGCATCCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGTGGAGAGGCTGGAAGTGTCTCTTAATCAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTCGAATTAAGCCTGGCATTTGAATGCAATAATGAAGAGAGGGGAGCTCCTCTGTCAACC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGAGGGAGCACGCAGTTTTCAGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTGTGACCA-AATGGGTGCAAAACAGCGAGTCACTAAAAACGAGCATCGTGAATGCCCGTCTTTCAATACCAGAGACGGAAAGTGCTGGAATAAAGAGATTA-------------GGGAATTAATTGTATTTAGGATGCTCTCACTAGCAGACCCCAGTGCAGGAAAAGTTCCTGGCCACCTGCCAGGACCACACAATGGGATTAT------------------------------------------------GTGGGCCCCAGGAGAAGGAACCTGGCTGGACATCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGATGTTTGGAACCTGAAAGCAC-TGA-GGTCTTAAGTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 57779 1411 - 21531802 -CCCTGAGTGTA----GGGAGACCTGCCCTCACAT-TGTGTGTGGAGAACAGTGGGTGAGGGCAGGCA-CTGGAGTGCAGATTGAC---AGGGGACAGCCTCAGCCTGTGGTGTCTGCAGAGGGCATGGGGGCATCTGCTCCCAGAGCCACGCT-CTTTTCCCTTCGGAGGCAGATTCCATATCCTCAGCTGGAGTTCAGCTCTGA--------------GGCTT-----TGAGTCCAAAACCTTCTCAGTTGTAGGGTCAGGAGCAGGGGATCCAGGTCTGGGGCTAGAACGTCGGCAAGTGGC-TCCCATCTCGTGC-AGATGTGGGGCCTGCGTCACCCCATGCTCTGCCAGGACCCT--CCAGGTTCAGATGCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTACCCTCCCAGGCA-CCCCCAACCTCCAGTCCTG------GGCTCACCCCAGCCA-----------TCACT-----TCAGGCAGGAGAGTCCC------------------------------CATTCATTCATTCAGAAGGGCCCCGG---CCATCCGCCA-GCCTCAGGGCGGAGTGCAGCTCCACCACTTCCAGTCAGGTGATCCTAGTCGCCTTCA---------------------------------------------------TGAATCT-CCCAGCCTCGGATCCCACCTCTCTCAGTGGGGCAACAGCACCCGGTACCCAGG--GGTGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAATTCGCTGCACTCAGGAAATCCAGTGCAAAT-GGGGCAGAGCAGCAGTG--------------------------------TGTTTGCAGCAATGGTCCTGGG--CCCACAGCACAATCCAGGGCATCCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGCAGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGTGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTCGAATTAAACCTGGCATTTGAATGCAATAATGAAGAGAGGGGAGCTCCTCTGTCAGCC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGAGGGAGCACGCAGTTTTCTGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCACTGACAATAAAACCCAACAGAGCTGCGACCA-AATGGGTGCAAAAAAGCGAGTCATTAAAAACGAGCATCGTGAATGCCCGTCTTTCAATAACAGAGACGGAAAGTGCTGGAATAAAGAGATTA-------------GGGAATTAATTGTATTTAGGATGCTCTCACTAGCAGACCCCAGGGCAGGAAAAGTTCCTGGCCACCTGCCAGGACCACACAATGGGATTAT------------------------------------------------GTGGGCCCCAGGAGAAGGAACCTGGCTGGACACCA---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGATGTTTGGAACCTGAAAGCAC-TGA-GGTCTTAAGTCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 81956 1416 - 2515279 -CCCTGAGCGTA----GGGAGACCTGCCCTCACAT-TGTGTGTGGAGAACAGTGGGTGGGGGCGGGCA-CTGGAGTGCAGATCGGCGGGGGGGGGCGGCCTTAGCCCATGGTGTCTGCAGAGGGGATGGGGGCATCTGCTCCCGGAGCCACACT-CTTTTTCCTTCGGAGGCAGATTCCATATCCTCAGCTGGAGTTCAGTGCTGA--------------GGCTT-----TGAGTCCAAAACCTTCTCAGTTGTAGGGTCAGGAGCAGGGGCTCCAGGTCTGGGGCCAGAACGTCGGCAGGTGGC-TCCCGTCTCGTGC-AGATGTGGTGCCTGCATCACCCCATTCTCTGCCAGGACCCT--GCAGGTTCAGATGCACATCAGGGACTGTAGCTCCCACCTTCCCTGCTCCTAACTCTTCTGCCCTCCCAGGCA-CCCCCCACCTCCAGTCCTG------GGCTCACCCCAGCCA-----------TCACT-----TCAGGCAGGAGAGTCCC------------------------------CATTCATTCATTCAGAAAGGCTCTGG---CCATCCGCCA-GGCTCAGGGCAGAGTGCAGCTCTACCACTTCCAGCCAGGTGATCCTAGTCGCATTCA---------------------------------------------------TGAATCT-CCCAGCCTCAGATCCTACCTCTCTCAGTGAGGCAACAGCACCCAGTACCCAGGGTGGTGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAATTGGCTGCACTCAGAAAATCCAGTGCAAAT-GGGGCAGAGCAACAGTG--------------------------------CGTTTGCGGCAATGGTCCTGGG--TCCACAGCACAGTCCCGGGCATCCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACGCTCAGAGGAGGTGGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTCGAATTAAACCTGGCATTTGAATGCAATAATGAAGAGAGGGGAGCTCCTCTGTCAACC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGAGGGGGCACGCAGTTTTCAGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTGTGACCA-AATGGGTGCAAAACAGCGAGTCACTAAAAACGAACATCGTGAATGCCCGTCTTTCAATACCAGAGACAGAAAGTGCTGGAATAAAGAGATTA-------------GGGAATTAATTGTATTTAGGATGCTCTCACTAGCAGACCCCAGTGCAGGAAAAGTTCCTGGCCGCCTGCCAGGACCACACAATGGGATTAC------------------------------------------------GTGGGCCCCAGGAGAAGGAACCTGGCTGGACACCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGATGTTTGGAACCTGAAAGCAC-TGA-GGTCTTAAGTCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 238746 1397 + 6586416 -CCCTGAGTGTATGTGAGGAGACCTGCCCTCACAT-TGTGTGTGGAGAACAGTGGGTGAGGGCAGGCA-CTGGGGTGCAGATCGGC----AGGGGCGGCCT----------------------------------------------------------------------CAGATTCCATATCCTAAGCTGGAGTTCAGTTCTGA--------------GGCTT-----TGAGTCCAAAACCTTCTCAGTTGTAGGGTCAGGAGCAGGGGCTCCAGGTCTGGGGCCAGAACGTCGGCAGGTGGC-TCCCGTCTCGTGC-AGATGTGGTGCCTGTGTCACCCCATTCTCTGCCAGGACCCT--GCAGGTTCAGACGCAGATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACTCTTCTGCCCTCCCAGGCA-CCCCCCACCTCCAGTCCTG------GGCTCACCCCAGCCA-----------TCACT-----TCAGGCAGGAGAGTCCC------------------------------CATTCATTCATTCAGAAGGGCCCCGG---CCCTCTGCCA-GCCTCAGGGCGGAGTGCAGCTCCACCACTTCCAGC--------------------CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTG-----------------------------TCAGTGAGGCAACGGCACCTGGTACGCAGGGTGGCGGCCCAGGGTGGCCGTGGAGTG-----------------------------------AG--TCACTG----------------------------------------------------------GGGAGGGCTCCTGGGTCCT-GGGCATC-TGAATTGGCTGCATTCAGAAAATCCAGTGCAAAT-GGGGCAGAGCAGCAGTG--------------------------------CGTTTGCGGCAATGGTCCTGGG--CCCACAGCACAGTCCCGGGCATCCACTGAGTTCTCAATTAAATCAAAACCCCCTTCCACAGAAAGCCCCTCTCCACACTCAGAGGAGGCGGAGAGGCTGGAAGTATTTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTCCAAGCTGCAGTCTTCGAATTAAACCTGGCATTTGAATGCAATAATGAAGAGAGGAGAGCTCCTCTGTCAGCC-AGCAGGACACGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCTGGATGAGGGAGAGGGAGCACGCAGTTTTCTGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCGGACAATAAAACCCAACAGAGCTGTGACCA-AATGGGCGCAAAATAGCGAGTCCTTAAAAACGAGCATTGTGAATGCCCATCTTTCAATA-CAGAGACGGAAAGTGCTGGAATAAAGAGATTA-------------GGGAATTAATTGTATTTAGGATGCTCTCACTAGCAGACCCCAGGGCAGGAAAAGTCTCTGGCCACCTGCCAGGACCACACAGTGGGATTATGTGGGCCCTAGGAGAAGGAACCTGGCTGGACACTCCTGTTGGGATTACGTGGGCCCCAGGAGAAGGAACCTGGCCGGACACCC---CTGTTGGTTCAGCAAG-G-AACCAGCCCAGGTTTTTGGAACCTGAAAGCAC-TGA-GGTCTTAAGTCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146604558 1522 - 204313951 -CCCTGAGTGTA----GGGAGACCTGCCCTCACAT-TTTGTGTGGAGGAGAGTGGGTGAGTGTGGGTG-TTGGAGTGCAGAT------CAGGGGACAGCCTCGGCCTGCGGTGTCTGCAGAAGGGATGGGGGCATATGCTCCCAGAGCCACACT-C-TTTTCCTTTGGAGGTAGATTCCATATCCCAAGCCAGAGCTCAGTTCTGA--------------GGCTT-----CAGATCCAAAACCTTCTCCATTGTAGGGTCAGGAGCAGGAGGTCCAGGTCTGAGGACATGTCAGGGACAGG-GGC-TTCCGTCTTGTGC-AGCTGTGGTGCCCACCTC--CCTATTCCCT-CCAGGACCCT--ACGGGTACAGATGCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACCCTTCTGCCCTCCCAGGCATTCCCCTGCCTCCAGCCCTG------GACTTACCCCAGCCA-----------TCACT-----TCAGGCAGGAGAGTCCTCATTTCTGGGcactcattcagtcattccttcattcattcattGAAAAGGAACCCGG---CCACCAGCCA-GCCTCAGGGCGGAGTGCCCCTCTAC-ACTTCCAGCCAGGTGATCCTAATCACATTCA---------------------------------------------------TGCATCT-CCCAGCCTCTGATCCCACCTCTCTCGGT-GGGCAACAGCACCCGATGCACAGGGTGGCAGCCCAAGGTGGCCGTAGAATGTTcacacagacacgcatacagacacatatagtcacac--ccacagagaaacacacacatgtacacCGCCTTCCATTTGCTCCCCACACTGCCTGCCCTGCCCTGGGAAGGCTCCTGGGTCCT-GGGCATC-TGGATTGGTTGCACTTGGAAACCCCAGTGCAAAC-AGGGCAGAGCGCTGGTG--------------------------------TGTCTGTAGCAATGATCCTGGG--TCCACAGCACAGTCC-AGACATTCACTCAGTTCTC----AAATCAAAAACTCCTTACACAGAAAGCCTCTCTCCACACTCAGAGAAGGCGGAGAGGCTGGAAGTGTCTCCTAATGAATTGTTTACTGTGAAATGCCTTTCACCTTTCAAGCTGCAGTCTCAGAATTAAACCTGGCATTTGAATGCAATAATGAAGAGAGGGGAGCTCCTCTATCAGCC-AGAAGGACATGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGACTGCCTGGGCTCATTGCTGGTTGAGGGAGAGGGAGCATGCAGTTTTCTGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCACTGACAATAAAACCCAACAGAGCTGTGAGCA-AATGGGTGCAAAATAGCAAGTCATTAAAAATGAGCATCTTGAATGCCCATCTTTCAATAATGTAGACAGAAAGTGCTGGAATAAAGAGATTA-------------GGAAATTAATTGTATTTAGGATCCTCTCACTAGCAGACCCCAGGGCAGGGAGAGTCTCTGGCTGCCTGTCAGGACCATACAATGGGATTAT------------------------------------------------GTGGGCCCCAGGAGAAGCAACCTGGCTGGACACCC---CTGTTCAGTCATCAAG-G-AACCAGCCTGGATTTTAGGAACTTGAAAACAC-TGA-GGTCTTAAGTCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 314030 1412 - 2409723 -CCCTGAGTGGA----GGGAGACCTGCCCTCACAT-TTTGTGTGGAGGAGAGTGGGTGAGTTTGTGTG-TTGGAGTGCAGAT------CAGGGT-CAGCCTCGGCCTGCAGGGTCTGCAGAAGGGGTGGGGACATATGCTCCCAGAGCCACACT-C--TTTCCTTTGGAGGTAAATTCCATATTCCAAGCCAGAGCTCAGTTCTGA--------------GGCTT-----CAGATCCAAAATCTTCTCAGTTGTAGGGTCAGGAGCAGGGGGTCCAGGTCTGAGGACAGGTCA-GGACAGG-GGC-TTCTGTCTTGTTC-CGCCGTGGCACCCGCCTC--CCTATTCCCTCCCAGGACCCT--ACGGGTACAGATGCACATCAGGGACTGTGGCTCCCACCTTCCCCGATCCTACCCCTTCTGCCCTCCCAGGCAACCCCCTGCCTCCAGCCCTG------GGCTTACCCCAACCA-----------TCGCT-----TCAGGCAGGAGAGTCCCCATTTCTGGAcactcattca--------ttcattcattcattGAAAAGGAACCCGG---CCACTAGCCG-GCCTCAGGGTGGAGTGCCCCTCTACTACTTCCAGCCAGGTGATCCTAGTCACATTCA---------------------------------------------------TGCATCT-CCCAGCCTCTGATTCCACCTCTCTCAGTGGGGCAACAGCACCCAATGCACAG-------------GGTGGCCGTAGAGTG-----------------------------------AC--TCACTG----------------------------------------------------------GGGAAGGCTCCTGGGTCCT-GGGCATC-TGAATCGGTTGCACTCAGAAACCCCTGTGCAAAC-AGGATGGAGCGCTGGTG--------------------------------TGTCTGTGGCAATGATCCCGGG--CCCACAGCACAGTCC-AGACATTCACTCACTTCTCAATTAAATAAAAAACTCCTTACACAGAAAGCTTCTCTCCACACTCAGAGAAGGCGGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTTCAAGCTGCAGTCTCAGAATTAAACCTGGCATTTGAATGCAATAATGAAGAGAGGGGAGCTCCTCTATCAGCC-AGAAGGACATGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTAGGCTCATCGCTGGTTGAGGAAAAGGGAGCATGCCGTTTTCTGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCACTGACAATAAAACCCAACAGAGCTGTGACCA-AATGGGTGCAAAATAGCAAGTCATTAAAAATGAGCATCTTGAATGCCCATCTTTCAATAACGTAGACAGAAAGTGCTGGAATAAAGAGATTA-------------AGGAATTAATTGTATTTAGGATCCTCTCACTAGGAGACCCCAGGGCAGGAAGAGTCTCTGGCTGCCTGCCAGGACCATATGATGGGACTAT------------------------------------------------GTGGGCCCCAGGAGAAGCAACCTGGCTGGACACCC---CTGTTCGTTCATCAGG-G-AAGCAGCCTGGATGTTTGGAACTTGAAAACGC-TGA-GGTCTTAAGTCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 449445 1436 - 2125214 -CCCTGAGTGTA----GGGAGACCTTCCCTCACAT-TTTGTGTGGAGGACAGTGGGTGAGTGTGGGTG-TTGGAGTGCAGAT------CAGGGGACGGCCTCAGCCTATGGTGTCTGCAGAAGGGGTGGGGGCATAGGCTTCCAGAGCCACACT-CTTTTCCCTTTGGAGGTAGATTTTATATCCCAAGCCAGAGCTCAGTTCTGA--------------GGCTT-----CAGATCCAAAACCTTCTCAGTTGTAGGGTCAGGAGCAGGGGATCCAGGTCTGAGGACAGGTCA-GGACAGG-GGC-TTCTGTCTTGTTC-AGCTGTGGTGCCCTCCTC--CCTATTCCCTCCCAGGACCCT--ACGGGTACAGATGCACATCAGGGACTGTGGCTCCCACCTTCCCTGCTCCTAACCCTTCTGCCCTCCCAGGCAACCCCCTGCCTCCAGCCCTG------GGCTTACCCCAACCA-----------TCACT-----TCAGGCAAGAGAGTCCCTATTTCTGGGCACtcattcattcattcattcattcattcattGAAAAGGAACCCGG---CCACCAGCCG-GCCTCAGGGCGGAGTGTCCCTCTACCACTTCCAGCCAGGTGATCCTAGTCACATTCA---------------------------------------------------TCCTTCT-CCCAGCCTCTGATCCCACCTCTCTCAGTGGGGCAACAGCACGCAATGCGCAGGGTGGCAGCCCACAGTGGCTGTAGAGTG-----------------------------------AC--TCACTG----------------------------------------------------------GGGAAGGCTCCTGGGTCCT-GGGCATC-TGAATTGGTTGCACTTGAAAGCCCCAGTGCAAAC-AGGGGAGAGCACTCATG--------------------------------TGTCTGTGGCAATGATCCTGGG--CCCACAACACAGTCC-AGACATTCACTCAGTTCTCAATTAAATCAAAAACTCCTTACACAGAAAGCCTCTCTCCACACTCAGAGAAGGCGGAGAGGCTGGAAGTGTCTCTTAATGAACTGTTTACTGCGAAATGCCTTTCACCTTTCAAGCTGCAGTCTCAGAATTAAACCTGGCATTTGAATGCAATAATGAAGAGAGGGGAGCTCCTCTATCAGCC-AGAAGGACATGATGAAAATCCAATTAAGTTGTGAATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCTGGTTGAGGGAGAAGGAACATGCAGTTTTCTGTAGTTTATCTGCACAGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACTCAACAGAGCTGTGACCA-AATGGGTGCAAAATGGCAAGTCATTAAAAATGGGCATCTGGAATGCCCATTTTTTAATAACGTAGACAGAAAGTGCTGGAATAAAGAGATTA-------------GGGAATTAATTGTATTTAGGATCCTCTCACTAGCAGACCCCAAGGCAGGGAGAGTCTCTGGCTGCCTGCCAGGACCATACAGTGGGATTAT------------------------------------------------GTGGGCCCCAGGAGAAGCAACCTGGCTGGACACCC---CTGTTCATTCATCAAG-G-AACCAACCTGGATTTTTGGAACTTGAAAACAC-TGA-GGTCTTAAGTCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 63341 1371 + 376347 -CCCTGAGTGTA----GGGAGACCTGCCCTCACAT-TTTGTGTGGAGGAGAGTGGGTGAGTATGGGTA-TTGGAGTGCAGAT------CAGGGGACGGCCTCAGCCTGTGGTGTCTGCAGAAGGGATGGGGGCATATGCTCCCAGAGCCACATT-CTTTTTCCTTTGGAGGTAGATTCCATATCCCAAGCCAGAGCTCAGTCCTGA--------------GGCTT-----CAGAATCAAAAGCTTCCCAGGTGTGGGGTCAGGAGCAGGGGGTCCAGGTCTGAAGACAGGTCA-GGACAGG-GGC-TTCCGTCTTGTGC-AGCTGTAGGG----CCTC--CCTATTCCCTCCCAGGACCCT--ATGGGTACAGATGCACATCAAGGACTGTGcctcccaccttccctgctcctaa--------ccctcccaggctcccccctgcctccAGCCCTG------GGCTTACCCTAACCG-----------TCACT-----TCAGGCAGGAGAGTCCTCATTTCTGGGcactcattca--------ttcattcattcattAAAAAGGAACCCGG---CCAGCAGCCG-GCCTCAGGGCGGAGTGCCCCTCTACCACTTCCAGCCAGGTGATCCTAGTCACATTCA---------------------------------------------------TGCATCT-CCCAGCCTCTGATCCCACCTCTCTCGGTGGGGCAACAGCACACGATGTGCAGGGTGGCAGCCCACGGTGGCCGTAGAGTG-----------------------------------AC--TCACTG----------------------------------------------------------GGGAAGCTTCCCGGGTCCC-GGGCATC-TGGATTGGTTGCACTTGGAAACCCCAGTGCAAAC-AGGGCAGAGCACTGGTG--------------------------------TGTCTGTGGCAATGATCCTGGG--CCCACAGCACAGTCC-AGATATTCACTCAGTTCTCAATTAAATCAAAAACCCCTTGCACAGAAAGCCCCTCTC--CACTCAGAGAAGGCAGAGAGGCTGGAAGTGTCTGTTAATGAACTGTTTACTGCGAAACGCCTTTCACCTTTCAAGCTGCAGTCTCAGAATTAAACCTGGCATTTGAATGCAATAATGAAG-------------------AGCC-AGAAGGACATGATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCATTGCCGGTTGAGGGAGAGGGAGCGTGCGGTTTTCTGTAGTTTATCTGCACGGCCCAGAGGCAGGTGTTTTACCCGCTGACAATAAAACCCAACAGAGCTG------------------------AAGTCATTAAAAACGAGCATCT-GAATGCCCATCTTTCAATAACGTCGACAGAAAGTGCTGGAATAAAGAGATTA-------------GGGAATTAATTGTATTTAGGATTCTCTCACTAGCAGACCCCAGGGCAGGGAGAGTCTCTGGCTGCCTGCCAGGACCATACAATGGGACCAT------------------------------------------------GTGGGCCCCAGGAGAAGCGACCTGCCTGGACACCC---CTGTTCATTCATCAAG-G-AACCAGCCTGGATTTTTGGAACTTGAAAACAC-TGA-GGTCTTAAGTCA i aotNan1.NW_018514293v1 C 0 I 1074 s otoGar3.GL873611 2182250 1234 - 8137123 -CCATGAGTGTA----GG--TTCCTGCCC-CACAC-TTTGTGTGGAGGGGAGTGGGTAAGGGTGGGAT-GTGGAGTGCAGAT-GGC----AGGGGCAGCCTTGGCTTGTGGTATCTGCTGAGGGGACAGGGGTGTCTGCTGTCAAGGCCACACT-ATTTTCCCTTTGGAGATGAATTCTCTATCATAAGCCAGAGTTCAGTTCTGAGGAAGCTCACCCTGGGCTT-----TGGGCTCAAAA--TTGTCTGTTTTAGGGC--AGGTCGAGAGCTCCAGGTCTGGGGATAGAACATTTGCAGGCAGCTTCCTGTCTCATGC-AGGTGCAGGGGT--CCTCACCTTGTCCTTTCCCAG-----------GGTCCAGGTACACATTAGTGACTGTGGCTCCCATCTGCT--------------------------GGCT-CC----------------------------------------------------------------------------------------------------------CATTA---------------------------------------------GGAGTCTAGGGCCACCACTTCCAGCTAGGGGTTCTCTGCCACGTTCC---------------------------------------------------TGGATCTCCCCAGCCTCTGATCTCTCCTTTCTCTATTGGACAATAGCACCTGCTACATGGGGCGG--------------CTTGGGGGC-----------------------------------A-------TG----------------------------------------------------------TGG--------TGGGTCCT-GGGCATCTTGCTTTTACTCTACTCAGAAACCCCAAGAAGAATCAAAGGAGAGCA--GGCA--------------------------------GGTCTGAGGCAGTGGTCTCAGG--CCCCCAGT-----------CATTCACTT-GCTCTTAATTAAATCAGAA-CCCCTCCCTCAAAAAGTCCCTCTCCACACTCAGAGGAGGCAGAGAGGCTGGAAGAGCCTCTTAATGCACTATTTACTATGAATCGCCTTTCACCTTCTAAGCTGCAGTCTTGGAATTAAACCTGGCATTTGAATGCAGTAATGAAGAGAGGGGAGCTCCTCTGTCAGCC-AGCAGGACACTATGAAAATCCAATTAAGTTGTGCATTTTAATTCCCTTGCCTGCCTGGGCTCAGTCCTGGATGAAGGC-ATGGAACGTGCACTTCTCTGCAGTTTATCTGCACAG-CCAGAGGCAGGTGTTTTACCCACTGATGATAAAACCCCACAAAGCTGTGACCA-AACAGGAGCAAAATGGCAAGTCATTAAAAATGAACATCCTTAATGCTGATCTTTCAATAATTCAGACAGAAAGTGCTGGAACAAAGAGATTAGTTTGCATGAAAAGGGAATCAGTTGTTTTTAGGATCTTCT------------------------------CCGGCCACCTGGCAGAATGGTACAAAGGAATTAT------------------------------------------------TTGGTCCCCAAGAGAAGGAACTTGGCTGGACCACCAATATGTTGGTTCAGCAAATG-AATGAGCCTGGATCTTTGGAATCTGAAAACAC-CAAGGGCCTCAAGTCC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 60993868 1245 - 77573801 TCCATGAGTGTG----GAGATGCCAGGCCCCACATCTGTGTGCCCCGGGGAGTGGGTGAGGGTGGGGAGCCAGAGGGCAGAC---C--CGGGGG---GCCTCA--------------CAG--------GGAGCATCTGCTCCCAGAGACATGCTATTTTTCCCTTTGGAGGCAGATCCCATCTCCCAAGCTCTGG---------GG--------------GGCTTCACACTGAGTCCAGAACCTTCTCTGTTTTAGAGGCAAGAGCA--GGTTCCAGGCCTGGGCAATGAGCA-------------GCCTGTTTGCTGCGAGGTGTAGTGTCTGCCCT-TCCTGTCTTCTCCCCAGCTCCTCAGCAAGCTCGGGTGTCCATCAGA-ACTGCGGCTCCCCC---TCCTGCT--------TGCCTCTCTTCCAGGCACCCTCTCCCCTCCAGGACAGCATCACAGCCCAGTCCACCCACTCGGCCTCCTCCACTGTTGCTCAGGCAGGAAAGCCCA-------GGGCACTATCCCT--------TCCTTTCCTTCCTTT--------CCTGGACTCCACCTTCTATGGCTCAGA----AGGGGTCCTCTGCCTTTTCCAGCCGG----------------CCA---------------------------------------------------TAGACAC-----------------------------------ACAGCACGGGCCACATAG--------------GCAGCCTTGGGAGC-----------------------------------AGGTCCCCCA----------------------------------------------------------GGGAGGG----GGTGTCCA----CGTC-TGGGC------------GATACCTCAGAGTGAAT-GAGGAGGAGAGAAGGAA--------------------------------TGTCTGAGTTAACAGGTGTGGGCACCCACAGCAGAATCCTGG---TCCCCAGAGC----------AGCTGAAACCCCTCGCCCCGAAGGCCCCTCTGCACACGC-------------AGGCTGGAAGTGCTTCTTAACGAACCG-CAACTGC-AAACGCCTTTCA-CTTCCAACCT-CAGCCTTGGAATTCAAGCTGGTATTTGAA-GCAGCCATGCAGAGAGGGGAG---CTCTGGTAGCC-AGCAGGACGCTAACAAAGTCAGATTAAGTCATGCATGTGGGCTCCCTCGCCTGCCTGGCTCAGCTGCTG---GAGGGAGGGGGA---TGGAGCTTTCTGTAGTTTGTCTGCACAGTCTA---------ATTTTAT-------TGATAAAGCTCCACAGAACTGTGACCATAATGGGTGCGCCA-AGCACGTTGTTACAGATGAGGATCTTGAACACCCATCTTTGGCTGGTATGGACAGAAGGTGAAGG-CTGAAGAGGTTCGTCTGTACAAAAGGGGAATTAACTTCATTTAGGAGGTTCTCACTGATAGATCCCAGGGCAGGGGACACTTTTGGCCACCGAGCAGGACTGTCCCA------CAC------------------------------------------------GTGG-TCCCAAGAGAAGGAAACCAACTGGACACCC---C----------------T-AATTAGTTTG--TCTTTAGAATCTGAAGGCAC-CAA-AGCCTCGAGTCA i canFam3.chr6 C 0 C 0 a score=93995.000000 s hg38.chr7_KI270899v1_alt 85065 9 + 190869 TGAAACTGG s panTro5.chr7_NW_015973523v1_random 21052 9 - 29993 TGAAACTGA i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 9432 9 + 9642 TGAAACTGA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 46393 9 - 432965 TGAAACTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 102665 9 + 85365473 TGAGACTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33951641 9 + 185818997 TGAGACTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33567979 9 + 192294377 TGAGACTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4328942 9 - 9440265 TGAGACTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16919624 9 - 21915920 TGAGACTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59190 9 - 21531802 TGAGACTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 83372 9 - 2515279 TGAGACTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240143 9 + 6586416 TGAGACTGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146606080 9 - 204313951 TGAGACTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 315442 9 - 2409723 CGAGACTGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 450881 9 - 2125214 CGAGACTGG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2183484 9 - 8137123 TGAGACCAG i otoGar3.GL873611 C 0 I 714 s canFam3.chr6 60995113 9 - 77573801 AGAGACTAG i canFam3.chr6 C 0 I 4818 e aotNan1.NW_018514293v1 64712 1074 + 376347 I a score=12000.000000 s hg38.chr7_KI270899v1_alt 85074 1 + 190869 G s panTro5.chr7_NW_015973523v1_random 21061 1 - 29993 G i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 9441 1 + 9642 G i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 46402 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 102674 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33951650 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33567988 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4328951 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16919633 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59199 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 83381 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240152 1 + 6586416 G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146606089 1 - 204313951 G i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 315451 1 - 2409723 G i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 450890 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 I 1101 s otoGar3.GL873611 2184207 1 - 8137123 g i otoGar3.GL873611 I 714 C 0 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 64712 1074 + 376347 I a score=-7465.000000 s hg38.chr7_KI270899v1_alt 85075 1 + 190869 -C s panTro5.chr7_NW_015973523v1_random 21062 1 - 29993 -C i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 9442 1 + 9642 -C i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 46403 1 - 432965 -C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 102675 1 + 85365473 -C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33951651 1 + 185818997 -G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33567989 1 + 192294377 -G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4328952 1 - 9440265 -G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16919634 1 - 21915920 -G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59200 1 - 21531802 -G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 83382 1 - 2515279 -G i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240153 1 + 6586416 -G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146606090 1 - 204313951 -G i calJac3.chr2 C 0 I 1075 s saiBol1.JH378296 315452 1 - 2409723 -G i saiBol1.JH378296 C 0 I 1059 s otoGar3.GL873611 2184208 1 - 8137123 t- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 64712 1074 + 376347 I e cebCap1.NW_016107703v1 450891 1101 - 2125214 I a score=297063.000000 s hg38.chr7_KI270899v1_alt 85076 40 + 190869 TTGAAAGAAAAGCACAAAAAT-AAGAAAATAAAAGAGAAAG------- s panTro5.chr7_NW_015973523v1_random 21063 40 - 29993 TTGAAAGAAAGGCACAAAAAT-GAGAAAATAAAAGAGAAAG------- i panTro5.chr7_NW_015973523v1_random C 0 C 0 s panPan2.chrUn_NW_014023765v1 9443 40 + 9642 TTGAAAGAAAGGCACAAAAAT-GAGAAAATAAAAGAGAAAG------- i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 46404 40 - 432965 TTGAAAGAAAGGCACAAAAAT-AAGAAAATAAAAGAGAAAG------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 102676 40 + 85365473 TTGAAAGAAAGGCACGAAAAT-AAGAAAATAAAAGAGGAAG------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33951652 39 + 185818997 TTGAAAGAAAGGCACAAAAAT--AGAAAATAAAAGAGAAAG------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33567990 39 + 192294377 TTGAAAGAAAGGCACAAAAAT--AGAAAATAAAAGAGAAAG------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4328953 39 - 9440265 TTGAAAGAAAGGCACAAAAAT--AGAAAATAAAAGAGAAAG------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16919635 39 - 21915920 TTGAAAGAAAGGCACAAAAAT--AGAAAATAAAAGAGAAAG------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59201 35 - 21531802 TT----GAAAGGCACAAAAAT--AGAAAATAAAAGAGAAAG------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 83383 39 - 2515279 TTGAAAGAAAGGCACAAAAAT--AGAAAATAAAAGAGAAAG------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240154 39 + 6586416 TTGAAAGAAAGGCACAAAAAT--agaaaataaaagagaaag------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146607166 40 - 204313951 TTGAAAGAAAGGCACAAAAAT-aagaaaagaaaagagaaag------- i calJac3.chr2 I 1075 C 0 s saiBol1.JH378296 316512 40 - 2409723 TTgaaagaaaggcacaaaaat-aagaaaaaaaatgagaaag------- i saiBol1.JH378296 I 1059 C 0 s otoGar3.GL873611 2184209 48 - 8137123 tggaaagaaaGTTACAAAAGGAAAGAGGATGAAAGGGAGACACAAAGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 64712 1074 + 376347 I e cebCap1.NW_016107703v1 450891 1101 - 2125214 I a score=1103347.000000 s hg38.chr7_KI270899v1_alt 85116 110 + 190869 -AAAGAAAAGAGAAGGGAAGAAAGCCAGGGCCC-TCGTAAG-------GTTCTTGGTCTTCCGGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTGGAA-CTCGATGAGAAAACAGA s panTro5.chr7_NW_015973523v1_random 21103 108 - 29993 -AAAGAAAAGAGAAGGGAAGAAAGCCAGGGCCC-TCGTAAG-------GTTCTTGGTCTTCCGGGGAGAACAGG-AAATCCACCTCGGTTC--TTCTTGGAATCTCGATGAGAAAACAGA i panTro5.chr7_NW_015973523v1_random C 0 N 0 s panPan2.chrUn_NW_014023765v1 9483 110 + 9642 -AAAGAAAAGAGAAGGGAAGAAAGCCAGGGCCC-TCGTAAG-------GTTCTTGGTCTTCCGGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTGGAA-CTCGATGAGAAAACAGA i panPan2.chrUn_NW_014023765v1 C 0 C 0 s gorGor5.CYUI01015914v1 46444 110 - 432965 -AAAGAAAAGAGAAGGGAAGAAAGCCAGGGCCC-TCGTAAG-------GTTCTTGGTCTTCCGGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTGGAA-CTCGATGAGAAAACAGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 102716 109 + 85365473 -AAAGAAAAGAGAAGGG-AGAAAGCCAGGGCCC-TCGTAAG-------GTTCTTGGTCTCCCGGGAAGAACGGGGAAACCCACCTCAGTTCATTTCTTAGAA-TTCAATGAGAAAACAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33951691 110 + 185818997 -AAAGAAAAGAGAAGGGAAGAAAGCCAACGCCC-TCGCAAG-------GTTCTTGGTCTTCCAGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTAGAA-CTTAATGAGAAAACAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33568029 110 + 192294377 -AAAGAAAAGAGAAGGGAAGAAAGCCAACGCCC-TCGCAAG-------GTTCTTGGTCTTCCAGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTAGAA-CTTAATGAGAAAACAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4328992 110 - 9440265 -AAAGAAAAGAGAAGGGAAGAAAGCCAACGCCC-TCGCAAG-------GTTCTTGGTCTTCCAGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTAGAA-CTTAATGAGAAAACAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16919674 110 - 21915920 -AAAGAAAAGAGAAGGGAAGAAAGCCAACGCCC-TCGCAAG-------GTTCTTGGCCTTCCGGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTAGAA-CTTAATGAGAAAACAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59236 110 - 21531802 -AAAGAAAAGAGAAGGGAAGAAAGCCAACACCC-TCACAAG-------GTTCTTGGTCTTCTGGGGAGAACAGGAAAATCCACCTCAGTTCATTTCTTAGAA-CTTAATGAGAAAACAGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 83422 110 - 2515279 -AAAGAAAAGAGAAGGGAAGAAAGCCAACGCCC-TCGCAAG-------GTTCTTGGTCTTCCGGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTAGAA-CTTAATGAGAAAACAGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240193 106 + 6586416 ------aaagagaagggaagaaagCCAAGGCCCTTCGCAAG-------GTTCTTGGTCTTCCTGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTAGAA-CTTCTTGAGAAAACAGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146607206 109 - 204313951 -aaagaaaagagaagggaagaaaGCCAAGGCCC-T-GTATG-------GTTCTTGGTCTCCCTGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTAGAA-CTTGATGAGAAAACAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 316552 110 - 2409723 -gaagaaaagagaagggaagaaagCCAGGGCCC-CGGTATG-------GTTCTTGGTCTCCCTGGGAGAACAGGAAAATCCACCTTGGTTCATTTCTTAGAA-CTCGATGAGAAAACAGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 451992 110 - 2125214 -aaagaaaagagaagcgaagaaaGCCAAGACCC-TTGTATG-------GTTCTTGGTCTTCCTGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTCAGAA-TTTCATGAGAAAACAGA i cebCap1.NW_016107703v1 I 1101 C 0 s aotNan1.NW_018514293v1 65786 110 + 376347 -aaagaaaagagaaaggaagaaaGCCAAGGCCC-CTGTGTG-------GGTCTTGGTCTCCCTGGGAGAACAGGAAAATCCACCTCGGTTCATTTCTTACAA-CTTGATGAGAAAACAGA i aotNan1.NW_018514293v1 I 1074 C 0 s otoGar3.GL873611 2184257 115 - 8137123 AAGGGGAGGAGGAAGAGAGGGGAGTCAAGCCTC-CCCTCTGCCACCCAGATGTTGGCGTTCCTAGGGGAACAGGCAAATCCACATCAGTTCACTTCTCAGAA-CT---TGAGCCAAAAGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I a score=468187.000000 s hg38.chr7_KI270899v1_alt 85226 49 + 190869 GGTACTGTCTTCACTTGAATTAATTTTTACATTTAAAATCTGATAGTAA s panPan2.chrUn_NW_014023765v1 9593 49 + 9642 GGTACTGTCTTCACTTGAATTAATTTTTACATTTAAAATCTGATAGTAA i panPan2.chrUn_NW_014023765v1 C 0 N 0 s gorGor5.CYUI01015914v1 46554 49 - 432965 GGTACTGTCTTCACTTGAATTAATTTTTACATTTAAAATCTGATAGTAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 102825 48 + 85365473 GGTTCCGTTTTCACTTG-ATTAATTTTTACATTTAAAATCTGATAGTAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33951801 49 + 185818997 GGTACTGTCCTCACTTGAATTAATTTTTACATTTAAAATCTGATAGTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33568139 49 + 192294377 GGTACTGTCCTCACTTGAATTAATTTTTACATTTAAAATCTGATAGTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4329102 49 - 9440265 GGTACTGTCCTCACTTGAATTAATTTTTACATTTAAAATCTGATAGTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16919784 49 - 21915920 GGTACTGTCCTCACTTGAATTAATTTTTACATTTAAAATCTGATAGTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59346 49 - 21531802 GGTACTGTCCTCACTTGAATTAATTTTTACATTTAAAATCTGATAGTAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 83532 49 - 2515279 GGCACTGTCCTCACTTGAATTAATTTTTACATTTAAAATCTGATAGTAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240299 49 + 6586416 GGTACTGTCCTCCCTTGGATTAATTTTTACACTTAAAATCTGATAGTAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146607315 49 - 204313951 AGTACTGTCCTCACTTGAGTTAATTTTTAGATTTAAAATTTGATCGTAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 316662 49 - 2409723 GGTACTGTCCTCACGTGAATCAATTTTTAGATCTAAAATCCAATAGTAA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 452102 49 - 2125214 GGTACTGTCCTCACTTGAATTAATTTTTAGATTTAAAATCTGACAGTAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 65896 49 + 376347 GGTACCGTCCTCACTTGAATTAATTTTTAGATTTAAAATCCGATAGTGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2184372 49 - 8137123 GGTACTGTCCTCACTTGAATTAATTTTCAGATTGAACATCTGAGAGCAA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I a score=1847936.000000 s hg38.chr7_KI270899v1_alt 85275 309 + 190869 GAAGGAAAGGGTACGTTAGAACTGCAAGAAAATATATGCAGTAACTACAGATTTTATCATCCAGTAACCTGGGACTCTGAGGGCAGGACAT---------------------G-CCTAGGACAGCAGGGT---ACGAGCACC-CTGCAGAGCGGGCTGCCTCCTGAAGGGC-CACCCACACC-----------------------AGGCACGG---------CGGGGGTGGTCAGGATCCTGTG----CCCTCACTCCTTCTCATTCCCTGGGAACTGGCAGGAACATCGCTGCTCTGGGCC-AGTGCTGGCCTGGCTCCTCACGAACGCAACACTGCCAGCTCTGCG-------CCCCTCAGA--CTGCTGGAAGCATCCC-- s gorGor5.CYUI01015914v1 46603 309 - 432965 GAAGGAAAGGGTACGTTAGAACTGCAAGAAAATATATGCAGTAACTACAGATTTTATCATCCAGTAACCTGAGACTCTGAGGGCAGGACAT---------------------G-CCTAGGACAGCAGGGT---ACGAGCACC-CTGCAGAGCGGGCTGCCTCCTGAAGGGC-CACCCACACC-----------------------AGGCACGG---------TGGGGGTGGTCAGGAGCCTGTG----CCCTCACTCCTTCTCATTCCCTGGGAACTGGCAGGACCATCGCCGCTCTGGGCC-GGTGCTGGCCCGGCTCCTCACGAACGCAACACTGCCAGCTCTGCG-------CCCCTCAGA--CTGCTGGAAGCATCCC-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 102873 308 + 85365473 GAAGAAAAGGGTATGTTAGAACTGCAAGAAAATATACGTAGTAACTACAGATGTTATCATCCAGTAACCTGGGACTTTGAGGGCAGGACAT---------------------G-CCCAGGACAGCAGTGT---ACGAGCACC-CTACAGAGTGGGCTGCC-CCTGAAGGGC-CACCCACACC-----------------------AGGCAC------------GGGGGCGGTCAGCAGCCTGTG----CCCTCACTCCTCCTCCTTCCCTGGGAACTGGCAGGACCATCGCTGCTCTGGGCTGGGTGCTGGCCTGGCTCCTCACGAACACAACACTGCCAGCTCTGCG-------CCCCTCAGACTCTGCTGGAAGCGTCCC-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33951850 287 + 185818997 GAAGGAAAGGTTATGCTAGAACTGCAAGAAAATATATGTAGTAACTACAGATTTTATCATCCAGTACCCTGGGGCTTTGAGGGCAGGACAC---------------------A-CCTAGGACAGCAGGGT---ACGAACACC-CCGCAGAGCGAGCTGCCTCCAGAACGGC-CACCCACACC-----------------------AGGCAC-------------------------AGCTTGTG----CCCCCACTCCTCCTCGTTCCCTGGGAACTGGCAGGCCCATCGCTGCTCTGGGCCAGGTGCTGGCCTGGCTCCACATGAA---------GGCAGCTCTGCG-------TCCCTCAGACTCTGCTGGAAGCATCCC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33568188 287 + 192294377 GAAGGAAAGGGTATGTTAGAACTGCAAGAAAATATATGTAGTAACTACAGATTTTATCATCCAGTACCCTGGGGCTTTGAGGGCAGGACAC---------------------A-CCTAGGACAGCAGGGT---ACGAGCACC-CCGCAGAGCGAGCTGCCTCCAGAACGGC-CACCCACACC-----------------------AGGCAC-------------------------AGCTTGTG----CCCCCACTCCTCCTCGTTCCCTGGGAACTGGCAGGCCCATCGCTGCTCTGGGCCAGGTGCTGGCCTGGTTCCTCATGAA---------GGCAGCTCTGCG-------TCCCTCAGACTCTGCTGGAAGCGTCCC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4329151 287 - 9440265 GAAGGAAAGGGTATGTTAGAACTGCAAGAAAATATATGTAGTAACTACAGATTTTATCATCCAGTACCCTGGGGCTTTGAGGGCAGGACAC---------------------A-CCTAGGACAGCAGGGT---ACGAGCACC-CCGCAGAGCGAGCTGCCTCCAGAACGGC-CACCCACACC-----------------------AGGCAC-------------------------GGCTTGTG----CCCCCACTCCTCCTCGTTCCCTGGGAACTGGCAGGCCCATCGCTGCTCTGGGCCAGGTGCTGGCCTGGCTCCTCATGAA---------GGCAGCTCTGCG-------TCCCTCAGACTCTGCTGGAAGCGTCCC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16919833 287 - 21915920 GAAGGAAAGGGTATGTTAGAACTGCAAGAGAATATATGTAGTAACTACAGATTTTATCATCCAGTACCCTGGGGCTTTGAGGGCAGGACAC---------------------A-CCTAGGACAGCACGGT---ACGAGCACC-CTGCAGAGCGAGCTGCCTCCAGAACGGC-CACCTACACC-----------------------AGGCAC-------------------------GGCTTGTG----CCCCCACTCCTCCTCGTTCCCCGGGAACTGGCAGGCGCATTGCTGCTCTGGGCCAGGTGCTGGCCTGGCTCCTCAAGAA---------AGCAGCTCTGCG-------TCCCTCAGACTCTGCTGGAAGCGTCCC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59395 285 - 21531802 GAAGGAAAGGGTATGTTAGAACTGCACGAAAATGTATGTAGTAACTACAGATTTTATCATCCAGTACCCTGGGGCTTTGAGGGCAGGACGC---------------------G-CCTAGGACAGCAGGGT---ACGAGCACC-CTGCAGAGCCAGTTGCCTCCTGAACGGC-CACCCACACC-----------------------AGGCAT-------------------------GGCTTGTA----CCCCCACTCCTCCTCGTTCCCTGGGAACTGGCAGGCCCATCGCTGCTCTGGGCCAGGTGCTGGCCTGGCTTCTCATGAA---------GGCAA--CTGCG-------CCCCTCAGACTCCGCTGCAAGCGTCCG-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 83581 287 - 2515279 GAAGGAAAGGGTATGTTAGAACTGCAAGAAAATATATGTAGTAACTACAGATTTTATCATCCAGTACCCTGGGGCTTTGAGGGCAGGACAC---------------------A-CCTAGGACAGCAGGGT---ACGAGCACC-CTGCAGAGCAAGCTGCCTCCAGAACGGC-CACCCACACC-----------------------AGGCAC-------------------------GGCTTGTG----CCCCTACTCCTCCTCGTTCCCTGGGAACTGGCAGGCCCATCGCTGCTCTGGGCCAGGTGCTGGCCTGGCTCCTCCTGAA---------AGCAGCTCTGCG-------TCCCTCAGACTCTGCTGGAAGCGTCCC-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240348 298 + 6586416 GAGGGAAAGGGTATGTTAGAACTGCACGAAAATATATGTAGTAACTACAGATTTTATCATCCAGTACCCTGGGGCTTTGAGGGCAGGACGCGCCTAGGACAGCAGAGTACGAG-CCTAGGACAGCAGGGT---ACGAGCACC-CTGCAGAGTGAGCTGCGTTCTGGACGGC-CACCCACACC-----------------------AGGCAC-------------------------GGCTTGTG----CCCCCACCCCTCCTCGTTCCTTGGGAACTGGCCGGCCCATCGCTGCCCTGGGCCAGGTGCTGGCCTGGCTCCTCATGAA---------GGCAGCTCTGCG-------CCCCTCAGACTCTGCTG------------ i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146607364 300 - 204313951 AAAGGAAAGGGTATGTTAGAACTGCAAGAAAATATACTTAGTAACTACCGATTTTATCATTTAGTAACCTGAGACTTTGAGGGCAGGACGT---------------------G-CCTAGGACAGC-----------AGCATCTCTGCAGAGCAAGCTGCCTCCTGAAGGGTGCACCCACACC-----------------------AGGTGG--------------GGGCGGTCAGGGGCCTGTGCCCTCCCTCATGCCTCCTCATTTCCTGGGAAATGACAGGACCATCACT-----GGGCCGGGTGCTGGCCTGGCTTCTCATAAATGCAACACTGTCAGCTCTGCA-------CCCCTCAGACCCTGCTGGAATCCTCCA-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 316711 327 - 2409723 AAAGGAAAGGGTATGTTAGAACTGCAGGAAAATATACTTAGTAACTACCGATTTTATCATTTAGTAACCTGAGACTTTGAGGGCAGGACGT---------------------G-CCTAGGACAGCAGCAT---GTGAGCATCTCTGCAGAGCAAGCTGCCTCCTGAAGGGTACACCCACACCAGGTTTTAGCCTCCCGAGTAGCTAGGTGG--------------GGGCAGTCAGGGGCCTGTG----CCCTCACGCCTCGTCATTCCCTGGGAAATGACAGGACCATCGCT-----GGGCCAGGTGCTGGCCTGGCTCCTCATAAATGCAACACCGTCAGCTCTGCA-------CCCCTCAGACTCTGCTGAAATCCTCCA-- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 452151 295 - 2125214 AAAGGAAAGGGTATGTTA---------GAAAATATACTTAGTAACTATCAATTTTATCATTTAGTAACCTGAGACTTTGAGGGCAGGACGT---------------------G-CCTAGGACAGCAGCGT---TTGAGCATCTCTGCAGAGCAAGCTGCCTCCTGAAGGGTGCACCCACACC-----------------------AGGCGG--------------TGGCGGTCAGGGGCCTGTG----CCTTCACGCCTCCTCATTCCCTGGGAAATGACACGACCATCGCC-----AGGTCGGGTGCTGGCCTGGCTCCTCATAAATGCAACACTGTCAGCGCTGCA-------CCCCTCAGACTCTGCTGGAATCCTCCA-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 65945 283 + 376347 AAAGGAAAGGCTATGTTAGAACTGCAGGAAAA--------------ACCGATTTTCTCATTTAGTCACCTGAGACTTAGAGGGCAGGACGT---------------------G-CCCAGGGCAGCAGCGT---GCGAGCACCTCTGCAGAGCAAGCTGCCTCCCGAAGGGTGCCGCCACACC-----------------------AGGCGG--------------GGGCAGTCAGGGGCC-----------TCACGCCTCCTCGTTCCCTGGGAAGTTACAAGACCATCACC-----GGGCCGGGCGCCGGCCTGGCTCCTCATAAATGCAACGCTGTCAGCTCTGCA-------GCCCTCAGACTCTGCTGGAACCCTGCA-- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2184421 323 - 8137123 AATGAAAAGAGTATGCTATAACTGAAAGATAATATATTTAGTAACCATAGATCTTATCACCTAATAACATGAGACTTTTAGGGCAAAACAT---------------------GTCCTAAGTAACCAATTTATGATGAACATTCTTCCTGAGAGAGCTGTCCCTGGAAGGATGTGCCTGCTGT-----------------------AGGCACAGCTGGAATCACTGGGGACCTCAGGCTCCTGTG----GCTTCA---CTCATCATTCCCTGGG-ATTGGCAGGACCACTGCTGCCCTGGGCCAAGTATGGACCTGACACCTCATTAA---------TGCAACACTGTGGATGTTTTCCCTCAAACCTTGCTAGAAATACCCACA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I a score=1135607.000000 s hg38.chr7_KI270899v1_alt 85584 146 + 190869 GTAGATCAGAGGATTCTGATCCCTGCCTCCAG--GGATGGGGTGTC-CACGGCACGTCTCCAGGTATGAACACACACAATTTGGCATGAACACATGCCTTTGGCGTTCTCTGGGACTAGACTGGGCAGATTAACAAGGTACCTTTAAAc s panTro5.chrUn_NW_015974889v1 4374 146 + 17818 GTAGATCAGAGGATTCTGATCCCTGCCTCCAG--GGATGGGGTGTC-CACGGCACGTCTCCAGGTATGAACACACACAATTTGGCATGAACACATGCCTTTGGCGTTCTCTGGGACTAGACTGGGCAGATTAACAAGGTACCTTTAAAc i panTro5.chrUn_NW_015974889v1 N 0 C 0 s gorGor5.CYUI01015914v1 46912 144 - 432965 GTAGATCAGAGAATTCTGATCCCTGACTCC-G--GGAT-GGGTGTC-CACGGCACGTCTCCAGGTATGAACACACACAATTTGGCATGAACACATGCCTTTGGCGTTCTCTGGGACTAGACTGGGCAGATTAACAAGGTACCTTTAAAc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 103181 130 + 85365473 GTAG----GAGAATTCTGATCCCTGCCTCCAG--GGATGGGGTGTC-CACGGCACGACTCCAGGTATGAACACACACAATTTAGCGTGAACACATGCCTTTAGCGTTCTCTAGGACTGGACTGGGCAGAT------------TTCAAAc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33952137 144 + 185818997 GCAGATAAGAGAATTCTGATCTCCGCCTCCAG--GGATGGGGTGTC-CACGGCATGTCTGCAGGTATGA--ACACACAGTTTGGCATGAACACGTGCCTTTAGCGTTCTCTGGGACTAGACTGCGCAGATTAACAAGGTACCTTAAAAc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33568475 144 + 192294377 GCAGATAAGAGAATTCTGATCTCCGCCTCCAG--GGATGGGGTGTC-CACGGCATGTCTGCAGGTATGA--ACACACAGTTTGGCATGAACACGTGCCTTTAGCGTTCTCTGGGACTAGACTGGGCAGATTAACAAGGTACCTTAAAAc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4329438 144 - 9440265 GCAGATAAGAGAATTCTGATCTCCGCCTCCAG--GGATGGGGTGTC-CACGGCATGTCTGCAGGTATGA--ACACACAGTTTGGCATGAACACGTGCCTTTAGCGTTCTCTGGGACTAGACTGGGCAGATTAACAAGGTACCTTAAAAc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16920120 144 - 21915920 GCAGATAAGAGAATTCTGATCTCCGCCTCCAG--GGATGGGGTGTC-CACGGCATGTCTCCAGGTATGA--ACACACAGTTTGGCATGAACACGTGCCTTTAGCGTTCTCTGGGACTAGACTGGGCAGATTAACAAGGTACCTTAAAAc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59680 144 - 21531802 GCAGATAAGAGAATTCTGATCTCCACCTCCAG--GGATGGGGTGTC-CACCGCACGTCTCCAGGTACCA--ACACACAGTTTGGCATCAACACGTGCCTTTAGCGTTCTCTGGGACTAGACTGGGCAGATTAACAAGGTACCTTACAAc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 83868 144 - 2515279 GCAGGTAAGAGAATTCTGATCTCTGCCTCCAG--GGATGGGGTGTC-CACGGCATGTCTCCAGGTATGA--ACACACAGTTTGGCATGAAGACGTGCCTTTAGCGTTCTCTGGGACTAGACTGGGCAGATTAACAAGGTACCTTAAAAc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240646 136 + 6586416 --------GAGAATTCTGATCTCCGCCTCCAA--GGATGGGGTGTC-CACGGCACGTCTCCAGGTATGA--ACACACAGTTTGGCATGAACACGTGCCTTTCGCGTTTGCTGGGACTAGACTGGGCAGATTAACAAGGTGCCTTAAAAc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146607664 138 - 204313951 GTAGATGAGAGAATTCTGATCCCTGCCTCCAG--GGATGGAGCGTC-TACGGCATGTCTCCAGCTATGAGCACACACAACTTGGCACGAACAC--------AGCATTCTCTGGGGCTAGATTGGGCATATTAACAAAGTACCTTAGAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317038 136 - 2409723 GT--ATGAGAGAATTCTGATCCTTGACTCCAG--GGATGGGGTGTC-TACAGCGTGTCTACAGCTATGAGCACACACAACTTGGCATGAACAC--------AGCATTCTCTGGGACTAGATTGGGCATATTAACAAAGTAGCTTAAAAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 452446 138 - 2125214 GTAGATGAGAGAATTCTGATCCCTGCTTCCAG--GGATGGAGTGTC-TAGGGCGTGTCTCCAGCTATGAGCACACACAACTTGGTGTGAACAC--------AGCATTCTCTGGGACTAGATTGGGCATATTAACAAAGTGCCTTAAAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66228 138 + 376347 GTAGATGAGAGAATTCTGATCCCTGCCTCCAG--GGATGGAGTGTC-TATGGCGTGTCTGCAGCTATGAGCACACACAACTCGGCGTGAACAC--------AGTGTTCTCTGGAACTAGATTGGGCATATTAACAAGGTACCTTAAAAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2184744 145 - 8137123 ACAGATTTGAGAATTCTGATCCCTGCCCAGAGGAGGTAGGATTGTCTCAGGGCATGTTCCTAGGTTT----CTGGGTAGTTTGGCATGAACATACACTTGTAGAGTTCTCTGGGACTAGATTGGGTAGATTGGCCAGGTACTTTAAAAC i otoGar3.GL873611 C 0 I 816 e canFam3.chr6 60995122 4818 - 77573801 I a score=561649.000000 s hg38.chr7_KI270899v1_alt 85730 79 + 190869 aggggtgcccaacccca--agtgtggacaggtactggtccgtggcctgtcaggaactgggccgcaca----------------------gcc----------tcccgtcggat s panTro5.chrUn_NW_015974889v1 4520 79 + 17818 aggggtgcccaacccca--agtgtggacaggtactggtccgtggcctgtcaggaactgggccgcaca----------------------gcc----------tcccgtcggat i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47056 79 - 432965 aggggtgcccaacccca--accgtggacaggtactggtccgtggcctgttagggaccgggccgcaca----------------------gcc----------tcccgttatat i gorGor5.CYUI01015914v1 C 0 I 25 s nomLeu3.chr20 103311 79 + 85365473 aggggtgcccaacccca--accgcagacaggtactggtccatggcctgttaggaacggggccgcaca----------------------gcC----------TCCCGTCGCAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33952281 79 + 185818997 aggggtgcccaaccctg--accgtggacaggtactggcccgtggcctgttagggatggggccgcaca----------------------gcc----------tcccgtcggat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33568619 79 + 192294377 aggggtgcccaaccccg--actgtggacaggtactggcccgtggcctgttagggatggggccgcaca----------------------gcc----------tcccgtcggat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4329582 79 - 9440265 aggggtgcccaacccca--accgtggacaggtactggcccgtggcctgttagggatggggccgcaca----------------------gcc----------tcccgtgggat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16920264 79 - 21915920 aggggtgcccaacccca--accgtggacaggtactggcccgtggcctgttagggacggggccgcaca----------------------gcc----------tcccgtcggat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59824 79 - 21531802 aggggtgcccaacccca--accgtggacaggtactggcccgtggcctgttagggactgggccgcaca----------------------gcc----------tcccgtcagat i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 84012 79 - 2515279 aggggtgcccaacccca--accgtggacaggtactggcccgcggcctgttaggaacggggccgcaca----------------------gcc----------tccggtcagat i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240782 79 + 6586416 aggggtgcccaacccca--accgtggacaggtactggcccgtggcctgttagggagggggccgcaca----------------------gcc----------tcccgtcggat i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146607802 103 - 204313951 agggatgcccaaccctaagacctcagcctaatactggtccgtggcctgttaggaacaggactgcacagcagcaggtgagcgtgagttttgcc----------tcccatcagat i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317174 113 - 2409723 agggatgcctaaccctaagaccacagcctaatactggtccgtggtctattaagaaagggaccgcacagcagcaggtgagtgtgagctccgccccatcccccacccccccagat i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 452584 103 - 2125214 agggatgcccaaccctaagaccgcagcctaatactggtctgtggcccattaggaacgggaccgcacagcagcaggtgagcatgagctccgcc----------tcccgtcagat i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66366 102 + 376347 agggatgtccaagcctaggaccgcagcctagtactggtccgtggcctgttaggaatgggact-cacagcagcaggtgagcgtgagctctgcc----------tcccgtcagat i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2184889 816 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I a score=20410.000000 s hg38.chr7_KI270899v1_alt 85809 3 + 190869 cgg s panTro5.chrUn_NW_015974889v1 4599 3 + 17818 cag i panTro5.chrUn_NW_015974889v1 C 0 C 0 s nomLeu3.chr20 103390 3 + 85365473 CAG i nomLeu3.chr20 C 0 M 454 s rheMac8.chr3 33952360 3 + 185818997 cag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33568698 3 + 192294377 cag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4329661 3 - 9440265 cag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16920343 3 - 21915920 cag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59903 3 - 21531802 cag i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 84091 3 - 2515279 cag i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240861 3 + 6586416 cag i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146607905 3 - 204313951 cag i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317287 3 - 2409723 cat i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 452687 3 - 2125214 cag i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66468 3 + 376347 tag i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2184889 816 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e gorGor5.CYUI01015914v1 47135 25 - 432965 I a score=188045.000000 s hg38.chr7_KI270899v1_alt 85812 29 + 190869 cggcggcattcgat-ctcataggagcatga s panTro5.chrUn_NW_015974889v1 4602 30 + 17818 cggcggcattcgattctcataggagcatga i panTro5.chrUn_NW_015974889v1 C 0 C 0 s rheMac8.chr3 33952363 30 + 185818997 cggcggcattagattctcacaggagcatga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33568701 30 + 192294377 cggcggcattagattctcacaggagcatga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4329664 30 - 9440265 cggcggcattagattctcacaggagcatga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16920346 30 - 21915920 cggcggcattagattctcacaggagcataa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59906 30 - 21531802 cggcggcattagattctcacaggagcatga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 84094 30 - 2515279 cggcggcattagattctcacaggagcatga i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240864 30 + 6586416 cagcggcattagattctcacaggagcatga i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146607908 30 - 204313951 cgatggcattagattctcacaggagcctga i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317290 30 - 2409723 tggtggcattagattctcacaggagcctga i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 452690 30 - 2125214 tgatggcattagattctcacaggagcctga i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66471 30 + 376347 cgggggcattagattctcacaggagcctga i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2184889 816 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e nomLeu3.chr20 103393 454 + 85365473 M e gorGor5.CYUI01015914v1 47135 25 - 432965 I a score=933800.000000 s hg38.chr7_KI270899v1_alt 85841 158 + 190869 accctgtcgtgagctgtgcgtgtgagagggatccaggttgcgtgctccttatgagaatctaactaatgcctgagcatacgaggtggaacagtttcatcccaaaaccatccccccaaccccaccctcatcccacagtacgtgggaaaattgtctcccat s panTro5.chrUn_NW_015974889v1 4632 158 + 17818 accctgtcgtgagctgtgcgtgtgagagggatccaggttgcgtgctccttatgagaatctaactaatgcctgaggatatgaggtggaacagtttcaacccaaaaccatccccccaaccccaccctcatcccacagtccgtggaaaaattgtctcccac i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47160 156 - 432965 accctgttgtgagctgtgcgtgt--gagggatccaggttacgtgctccttatgagaatctaactaatgcctgaggatacgaggtggaacagtttcatcccaaaaccatccccccaaccccaccctcatcccacagtctgtggaaaaattgtttcccat i gorGor5.CYUI01015914v1 I 25 C 0 s rheMac8.chr3 33952393 155 + 185818997 accctactgtgaactgtgcacac--gagggatcccagttgcgcatcccttatgagaatctaactaatgcctgagggtatgaggtggaggagtttcatctc-aaaccatccccccaaccccaccctcatcccacagtccgtgcaaaaattgtcttcccc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33568731 155 + 192294377 accctactgtgaactgtgcacac--gagggatcccagttgcgcatcccttatgagaatctaactaatgcctgagggtatgaggtggaggagtttcatctc-aaaccatccccccaaccccaccctcatcccacagtccgtgcaaaaattgtcttccac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4329694 155 - 9440265 accctactgtgaactgtgcacac--gagggatcccagttgcgcatcccttatgagaatctaactaatgcctgagggtatgaggtggaggagtttcatctc-aaaccatccccccaaccccaccctcatcccacagtccgtgcaaaaattgtcttccac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16920376 155 - 21915920 accctactgtgaactgtgcacac--gagggatcccagttgcgcatcccttatgagaatctaactagtgcctgagggtatgaggtggaggagtttcatcac-aaaccatccccccaaccccaccctcatcccacagtccgtgcaaaaattgtgttccac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 59936 155 - 21531802 accctactgtgaactgtgcacac--gagggatcccgactgcgcgtcccttatgagaatctaactaatgcctgagggtgtgaggtggagcagtttcatccc-aaaccatccccccaaccccaccctcatcccacagtccgtgcaaaaattgtcttccac i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 84124 155 - 2515279 accctactgtgaactgtgcacag--gagggatcccagttgcgcatcccttatgagaatctaactaatgcctgagggtatgaggtggaggagtttcatccc-aaaccatccccccaaccccaccctcatcccacagtccctgcaaaaattgtgttccac i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 240894 155 + 6586416 accctactgtgaactgtgcacac--gagggatcccggttgcgcatcccttatgagagtctaactaatgcctgacggtatgaggtggagcagtttcatccc-caaccatccccccaaccccagcctcatcccacagtccgtggaaaaactgtgttccac i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146607938 150 - 204313951 accctattgtgaactgtgcatgt--gagggatctagattgcacattccttataagactctaa----tgcctgatagtatgaggtggaacagtttcatgccaaaaccattaccccaaccccactcttatcccccagtc--tggaaaaattgtcttctgt i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317320 141 - 2409723 accctgttgtgaactgtgcatgt--gagggatctaggatgcatgttccttgtaaca-------------ctgatgatatgagatagaacagtttcatgccaaaaccatt-ccttgaccccactctcatccccagttc-gtggaaaaattgtcttctgt i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 452720 152 - 2125214 acactattgtgaactgtgcatgt--gagggatctaggatgcatgttccttataagactctaa----tgcctgctgatatgaagtggaacagtttcatgccaaaaccattcccccagccccactctcatcccccagtctgtggaaaaattgtcttctgt i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66501 152 + 376347 accccgtcgtgaactgtgcatgt--gaggggcctaggttgcgcgtcccttataagactctga----tgcctgatgacacgaggtggaaccgtttcatgccagaaccattcccccgaccccactcttaccccccagtcagtggaaaaactgtcttccgt i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2184889 816 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e nomLeu3.chr20 103393 454 + 85365473 M a score=568806.000000 s hg38.chr7_KI270899v1_alt 85999 77 + 190869 gaaactggtaccaaaatggttggggacggctgCCTTAAAACACAAGGTTGATTT----------------------------------------------------------------ATAGTAAAGGAGCAACAGGCACC s panTro5.chrUn_NW_015974889v1 4790 73 + 17818 gaaactggtaccaaaatggttggggacggctgCCTTAAAACACAAGGTTGAT--------------------------------------------------------------------AGTAAAGGAGCAACAGGCACT i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47316 77 - 432965 gaaactggtaccaaaacggttggggacggctgCCTTAAAACACAAGGTTGATTT----------------------------------------------------------------ATAGTAAAGGAGCAACAGGCACT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 103847 75 + 85365473 GAAACT-GTACCAAAATGGTTGGGGATGGCTG-CTTAAAACACAAGATTGATTT----------------------------------------------------------------ACAGTAAAGGAGCAACAGGCACT i nomLeu3.chr20 M 454 C 0 s rheMac8.chr3 33952548 77 + 185818997 aaaactgatgccaaaatggttggggatggctgCCTTAAAACACAAGACCGATTT----------------------------------------------------------------ATACTAAAGGAGCAACATGCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33568886 77 + 192294377 gaaactgatgccaaaatggttggggatggctgCCTTAAAACACAAGACCGATTT----------------------------------------------------------------ATACTAAAGGAGCAACATGCACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4329849 77 - 9440265 gaaactgatgccaaaatggttggggatggctgCCTTAAAACACAAGACCGATTT----------------------------------------------------------------ATACTAAAGGAGCAACATGCACT i macNem1.NW_012019910v1 C 0 I 461 s cerAty1.NW_012002954v1 16920531 77 - 21915920 gaaactgatgccaaaatggttggggatggctgCCTTAAAACACAAGACCGATTT----------------------------------------------------------------ATACTAAAGGAGCAACATGCACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 60091 77 - 21531802 gaaacgggcgccaaaatggttggggacggctgCCTTAAAACACAAGACCGATTT----------------------------------------------------------------ATACTAAAGGAGCAACATGCACT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 84279 77 - 2515279 gaaactgatgccaaaatggttggggatggctgCCTTAAAACACAAGACCGATTT----------------------------------------------------------------ATACTAAAGGAGCAACATGCACT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 241049 77 + 6586416 gaaactggtgccaaaatggttggggacggctgCCTTAAAACACAAGACCGATTT----------------------------------------------------------------ATACTAAAGGAGCAACAGGCACT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146608088 123 - 204313951 gaaactggtgccaaaatgtttggggatggctACCTTAAAACACAAGATCGATTTATACTAAAGGAGCAGCATGCACTGAAATTGACATACAGATTGATTT------------------ATACTAAAGGAGCAACATGCACT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317461 123 - 2409723 gaaactggtgccaaaatggttggggatggctACCTTAAAACACAAGATTGATTTATACTCAAAGAGCAGCATGCACTGAAATTGACACACAGATTGATTT------------------ATACTAAAGGAGCAACATGCACT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 452872 123 - 2125214 gaaactggtgccaaaatggttggggatggctACCTTAAAACACAAGATTGATTTATACTAAAGGAGTAGCATGC------------------ACTGAAATTGATACACAGATTAATTTATGCTAATGGAGCAAGATGCACT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66653 77 + 376347 gaaactggtgccaaaatggttggggacggctACGTTAAAACACAAGAGTGATTT----------------------------------------------------------------ATCCTAAAGGCACAGCGTGCACT i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2184889 816 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I a score=319905.000000 s hg38.chr7_KI270899v1_alt 86076 44 + 190869 GAAATTCACACTCAGGAGAGGAGCCGTGCGAGCTAAAGGAACAC s panTro5.chrUn_NW_015974889v1 4863 44 + 17818 GAAATTCACACCCAGGAGAGGAGCCGTGCGAGCTAAAGGAACAC i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47393 44 - 432965 GAAATTCACACCCAGGAGAGGAGCCGTGCGAGCTAAAGGAACAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 103922 42 + 85365473 GAAATTCACAC-CAGGAGAAGAGCCCTGTGA-CTAAAGGAACAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33952625 44 + 185818997 GATATTTACACACAGGAGAGGAGCCACGTGACCTAAAGGAACAC i rheMac8.chr3 C 0 I 474 s macFas5.chr3 33568963 44 + 192294377 GATATTTACACACAGGAGAGGAGCCACGTGACCTAAAGGAACAC i macFas5.chr3 C 0 I 474 s macNem1.NW_012019910v1 4330387 44 - 9440265 GAAATTTACACACAGGAGAGAAGCCACATGACCTAAAGGAAAAT i macNem1.NW_012019910v1 I 461 C 0 s cerAty1.NW_012002954v1 16920608 44 - 21915920 GATATTTACACACAGGAGAGGAGCCACGTGACCTAAAGGAACAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 60168 44 - 21531802 GAAATTTACACACAGGAGAGGAGCCACCTGACCTAAAGGAACAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 84356 44 - 2515279 GATATTTACACACAGGAGAGGAGCCACGTGACCTAAAGGAACAC i manLeu1.NW_012101810v1 C 0 I 407 s colAng1.NW_012117710v1 241126 44 + 6586416 GAAATTTACACACAGGGGAGGAGCCACCTGACCTAAAGGAACAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146608211 44 - 204313951 GAAATTCACATACAGGAGTGGAGCCATGTGACCTGAAGGAACAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317584 44 - 2409723 GAAAATCACATACAGGAGTGGAACCATGTGACCTGAAGGAACAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 452995 43 - 2125214 AAAATTCACATACAGGAG-GGAGCCATGTGACCTGAAGGAACAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66730 44 + 376347 GAGATTCACACACAGGAGTGGAGCCGTGTGACCTGAAGGAACAG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2184889 816 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I a score=37601.000000 s hg38.chr7_KI270899v1_alt 86120 6 + 190869 -AGTCCG s panTro5.chrUn_NW_015974889v1 4907 6 + 17818 -AGTCCG i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47437 6 - 432965 -AGTCCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 103964 6 + 85365473 -AGTCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33953143 6 + 185818997 -GGTCCA i rheMac8.chr3 I 474 C 0 s macFas5.chr3 33569481 6 + 192294377 -GGTCCA i macFas5.chr3 I 474 C 0 s macNem1.NW_012019910v1 4330431 6 - 9440265 -GGTCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16920652 6 - 21915920 -AGTCCG i cerAty1.NW_012002954v1 C 0 I 673 s chlSab2.chr28 60212 6 - 21531802 -GGTCCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 84807 6 - 2515279 -GGTCCA i manLeu1.NW_012101810v1 I 407 C 0 s colAng1.NW_012117710v1 241170 6 + 6586416 -GGTCCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146608255 7 - 204313951 AGTTCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317628 7 - 2409723 AGTTCCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 453038 7 - 2125214 AGTTCCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66774 7 + 376347 CGTTCCG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2184889 816 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I a score=6597.000000 s hg38.chr7_KI270899v1_alt 86126 5 + 190869 -TTCCC s panTro5.chrUn_NW_015974889v1 4913 5 + 17818 -TTCCC i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47443 5 - 432965 -TTCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 103970 5 + 85365473 -TTCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33953149 4 + 185818997 -TTCC- i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33569487 4 + 192294377 -TTCC- i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4330437 4 - 9440265 -TTCC- i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16921331 4 - 21915920 -TTCC- i cerAty1.NW_012002954v1 I 673 I 1 s chlSab2.chr28 60218 4 - 21531802 -TCCC- i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 84813 4 - 2515279 -TTCC- i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 241176 4 + 6586416 -TTCC- i colAng1.NW_012117710v1 C 0 I 274 s calJac3.chr2 146608262 5 - 204313951 TTTCA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317635 5 - 2409723 TTTCA- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 453045 5 - 2125214 TTTCA- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66781 5 + 376347 TGTCT- i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2184889 816 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I a score=66906.000000 s hg38.chr7_KI270899v1_alt 86131 7 + 190869 GTCCTGC s panTro5.chrUn_NW_015974889v1 4918 7 + 17818 GTCCTGC i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47448 7 - 432965 GTCCTGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 103975 7 + 85365473 GTCCTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33953154 7 + 185818997 GTCCTGC i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33569492 7 + 192294377 GTCCTGC i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4330442 7 - 9440265 GTCCTGC i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16921336 7 - 21915920 GTCCCGC i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 60223 7 - 21531802 GTCCTGC i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 84818 7 - 2515279 GTCCTGC i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 241454 7 + 6586416 GTCCTGC i colAng1.NW_012117710v1 I 274 C 0 s calJac3.chr2 146608267 7 - 204313951 GTCCTGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317640 7 - 2409723 GTCCTGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 453050 7 - 2125214 GTCCTGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66786 7 + 376347 GTCCTGC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2184889 816 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I a score=58800.000000 s hg38.chr7_KI270899v1_alt 86138 6 + 190869 AGGAAG s panTro5.chrUn_NW_015974889v1 4925 6 + 17818 AGGAAG i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47455 6 - 432965 AGGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 103982 6 + 85365473 AGGAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33953161 6 + 185818997 AGGAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33569499 6 + 192294377 AGGAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4330449 6 - 9440265 AGGAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16921343 6 - 21915920 AGGAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 60230 6 - 21531802 AGGAAG i chlSab2.chr28 C 0 I 409 s manLeu1.NW_012101810v1 84825 6 - 2515279 AGGAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 241461 6 + 6586416 AGGAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146608274 6 - 204313951 AGGAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 317647 6 - 2409723 AGGAAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 453057 6 - 2125214 AGGAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 66793 6 + 376347 AGGAAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2185705 6 - 8137123 AAGAAG i otoGar3.GL873611 I 816 C 0 e canFam3.chr6 60995122 4818 - 77573801 I a score=1495390.000000 s hg38.chr7_KI270899v1_alt 86144 160 + 190869 CCATCAGCGCTTCTCAAACGTGACGCGGTTCTCACCTAGTCCAGCGGCTATTTCTCCTCCCACTTTCCTGGAGGAACACCG-CTGCTAGGCCCTAGGTTTCTGACAGCTCAGCCACTTAAAAGTAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC s panTro5.chrUn_NW_015974889v1 4931 160 + 17818 CAATCAGCGCTTCTCAAACGTGACGCAGTTCTCACCTAGTCCAGCGGCTATTTCTCCTCCCACTTTCCTGCAGGAACACCG-CTGCTAGGCCCTAGGTTTCTGACAGCTCAGCCACTTAAAAGTAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47461 160 - 432965 CAATCAGTGCTTCTCAAACATGACGCAGTTCTCACCTAGTCCAGCGGCTATTTCTCCTCCTGCTTTCCTGGAGGAACACCG-CTGCTAGGCCCTAGGTTTCTGACAGCTCAGCCACTTAAAAGTAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 103988 160 + 85365473 CAATCAGCGCTTCTTAAAGGTGACGCAGTTCTCACCTAGTCCAGGGGCTATTTCTCCTCCCACTTTCCTGGAGGAACACCG-CTGCTGGGCTCTAGGTTTCTGACAGCTCAGCCACTTAAAAGTAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTGTGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33953167 160 + 185818997 CAATCAGTGCTTCTTAAATTTGATGCCGTTCTCACCTAGTCCAGTGGCTATTTCTCCTCCTACTTTCCTGGAAGAACACCA-CTGCTAGGCTCTAGGTTTCTGACAGCTCAGCCACTTTAAAGCAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33569505 160 + 192294377 CAATCAGTGCTTCTTAAATTTGATGCCGTTCTCACCTAGTCCAGTGGCTATTTCTCCTCCTACTTTCCTGGAAGAACACCA-CTGCTAGGCTCTAGGTTTCTGACAGCTCAGCCACTTTAAAGCAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4330455 160 - 9440265 CAATCAGTGCTTCTTAAATTTGATGCCGTTCTCACCTAGTCCAGTGGCTATTTCTCCTCCTACTTTCCTGGAAGAACACCA-CTGCTAGGCTCTAGGTTTCTGACAGCTCAGCCACTTTAAAGCAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16921349 160 - 21915920 CAATCAGTGCTTCTTAAATTTCATGCCGTTCTCACCTAGTCCAGTGGCTATTTCTCCTCTTACTTTCCTGGAAGACCACCA-CTGCTAGGCTCTAGGTTTCTGACAGCTCAGCCACTTTAAAGTAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 60645 160 - 21531802 CAATCAGTGCTTCTTAAATTTGATGCCGTTCTCACCTAGTCCAGTGGCTATTTCTCCTCCCACTTTCCTGGAAGAACACCA-CTGCTAGGCTCTAGGTTTCTGACAGCTCAGCTACTTTAAAGTAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC i chlSab2.chr28 I 409 C 0 s manLeu1.NW_012101810v1 84831 160 - 2515279 CAATCAGTGCTTCTTAAATTTGATGCAGTTCTCACCTAGTCCAGTGGCTATTTCTCCTCCTACTTTCCTGGAAGAACACCA-CTGCTAGGCTCTAGGTTTCTGACAGCTCAGCCACTTTAAAGTAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 241467 160 + 6586416 CAATCAGTGCTTCTTAAATTTGATGCCGTTCTCACCCAGTCCAGTGGCTATTTCTCCTCCCACTCTCCTGGAAGAACACTG-CTGCTAGGCTCTAGGTTTCTGACAGTTCAGCCACTTTAAAGTAGGAAATCCAGCTGCCTAGGACC--CATCTTGGTCTGTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146608280 160 - 204313951 CAATCAGTGCTTCTTAAATTTGATGCAGTTCTCACCTAGTCCAGTGGCTATTTCTCCTCCCACTTTCTTGGAGGAACACCG-CTGCTAGGCTCTAGGTTTCTGACAGCTCAGTCATGTAAAAGTAGGAAATCCAACTGCCTAGGACC--CCTCTTGGTCTGTC i calJac3.chr2 C 0 I 2 s saiBol1.JH378296 317653 157 - 2409723 ---TCAGTGCTTCTCAAATTTGATGCAGCTCTCACCTAGTCCAGTGGCTATTTCTCCTCTCACTTTCCTGGAGGAACAACA-CTATGAGGCTCTAGGTTTCTGACAGCTCAGCCACTTAAAAGTAGGAAATCCAACTGCCTAGGACC--CCTCTCGGTCTGTC i saiBol1.JH378296 C 0 I 2 s cebCap1.NW_016107703v1 453063 160 - 2125214 CAATCAGTGCTTCTTAAATTTGATGCAGTTCTCACCTAGTCCAGTGGCTATTTCTCCTCTCATTTTCCTGGAGGAACACCA-CTGCTAGGCTCTAGGTTTCTGACAGCTCAGCCATGTAAAAGTAGGAAATCCAACTGCTTAGGACC--CCCCTTGGTCTGTC i cebCap1.NW_016107703v1 C 0 I 2 s aotNan1.NW_018514293v1 66799 159 + 376347 CAATCAGCGCTTCTTAAATCTGACGCAGTTCTCACCTAGTCCCGTGGCCGTTTCCCCTCCCACTTCCCTGGAGGAACAGCG-CCGCCAGGCTGCAGGGTTCTCACAGCTCAGCC-CGTAAAAGTAGGAAGTCCAACTGCCTGGGACC--CCTCTTGGTCTGTC i aotNan1.NW_018514293v1 C 0 I 19 s otoGar3.GL873611 2185711 161 - 8137123 CAAGCAGGGTTTCCTAAATTTGATGCAATTCTTACCCAGTTCAGTGGCTATTTCTCCTCTCAATTTAAGGAAGAAGCCCTAGCTCCTAGGCTCTAAGTTTCTGATA-CTCA-CCACTTGACAGTGGgaagtctgacggtctaggacctttattttggtctgtc i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I a score=164317.000000 s hg38.chr7_KI270899v1_alt 86304 23 + 190869 CTTCACTCA--GTGTGACCTGGAGA--- s panTro5.chrUn_NW_015974889v1 5091 23 + 17818 CTTCACTCA--GTGTGACCTGGAGG--- i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47621 23 - 432965 CTTCACTCA--GTGTGACCTGGAGG--- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 104148 23 + 85365473 CTTCACTCA--GTGTGACCTGGAGG--- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33953327 23 + 185818997 CTTCACTCA--GTGTGACCTGGAGG--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33569665 23 + 192294377 CTTCACTCA--GTGTGACCTGGAGG--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4330615 23 - 9440265 CTTCACTCA--GTGTGACCTGGAGG--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16921509 23 - 21915920 CTTCACTCA--GTGTGACCTGGAGG--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 60805 23 - 21531802 CTTCACTCA--GTGTGACCTGGAGG--- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 84991 23 - 2515279 CTTCACTCA--GTGTGACCTGGAGG--- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 241627 23 + 6586416 GTTCACTCA--GTGTGACCTGCGGG--- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146608442 22 - 204313951 -CTCCATCA--ATGTGACCTGGAGC--- i calJac3.chr2 I 2 I 5 s saiBol1.JH378296 317812 22 - 2409723 -CTCCGTCA--GTGTGACCCGGAGC--- i saiBol1.JH378296 I 2 I 5 s cebCap1.NW_016107703v1 453225 22 - 2125214 -CTCCATCA--GTGTGACCTGGAGC--- i cebCap1.NW_016107703v1 I 2 I 5 s otoGar3.GL873611 2185872 28 - 8137123 attcacttactatgtgatctggagtagg i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 66958 19 + 376347 I a score=3367991.000000 s hg38.chr7_KI270899v1_alt 86327 397 + 190869 ----------TTCCT---------TCGCCTTGTTATGTGAATGTTACGATCTCACACCCAGAATGCAGCAAACATGAAAACCTGTCATTATGAATGTGGATTCC---------TCCACagaatagacgcctaaatcatggtatacggtctaattaaatggaatattaaaatgaatgagctagaatttataaatcaacatagataatctaagaacaAATTAAATACagggacaccagcaagatggagaactaggaagccccagggagtcctcgttcccccaccgagacactgg-ttagcaataatctatggacagaacagccagtgtgagaaccccagaatccgattaggaggttgcagcaccccctgtgagtgcaaagcccagaagggccacatctgagcagataagaaaaaaa-gtcacagcattt s panTro5.chrUn_NW_015974889v1 5114 397 + 17818 ----------TTCCT---------TCGCCTAGTTATGTGAATGTTACGGTCTCACACCCAGAATGCAGCAAACATGAAAACCTGTCGTTATGAATGTGGATTCC---------TCCACagaatagatgcctaaatcatggtatacggtctaattaaatggaatattaaaatgaatgagctagaatttgtaaatcaacatagataatctaagaacaAATTAAATACagggacaccagcaagatggagaactaggaagccccaaggagtcctcgttcccccaccgagacactgg-ttagcaataatctatggacagaacagccggtgtgagaaccccagaatccgattaggaggttgcagcaccccctgtgagtgcaaagcccagaagggccacatctgagcagataagaaaaaaa-gtcacagcattt i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 47644 395 - 432965 ----------TTCCT---------TCGCCTTGTTATGTGAATGTTACGATCTCACACCCAGAATGCAGCAAACATGAAAACCTGTCATTATGAATGTGGATTCC---------TCCACAGAATAGATGCCTAAATCATGGTATACGGTCTAATTAAAT-GAATATTAAAATGAATGAGCTAGAATTTATAAATCAACGTA-ATAATCTAAGAGCAAATTAAATACagggacaccagcaagatggagaactaggaagccccagggagtcctcgttcccccaccgagacactgg-ttaggaataatctatggacagaacagccggtgtgagaaccccagaatccgattaggaggttgcagcaccccctgtgagtgcaaagcccagaagggccacatctgagcagataagaaaaaaa-gtcacagcattt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 104171 395 + 85365473 ----------TTCCT---------TCGCCTTGTTACGTGAATGTTAGGATCTCACACCCAGAGTGCAGCAAACATTAAAACCTGGCATTATGAATGTGGAttcc---------tccacaggatagattcctaaatcatggtgtacgatctaattaaatggaatattaaaatgaatgagctagaatttataaatcaacatagataatctaagaacaAATTAAATACagggacaccagcaagatggagaactaggaagccccagggagccctcgttcccccaccgagacactgg-ttagcaataatctatgggcagaacagccggtgtgagaa-ctcagaatccaattaggaggttgcagcaccccc-gtgagtgcaaagcccagaagggccacatctgagcagataagaaaaaaa-gtcacagcattt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33953350 398 + 185818997 ----------TTCCT---------TCGTCTTATTATGTGAAGGTTATGATCTCACACCCAGAGTGCAGCAAACATTAAAACCTGGCATTATGAATGTGGATTCT---------TCCACAGAACAGATTCCTAAATCATGGTATACTATCTAATTAAATGGAATATTAAAATGAATGAGCTAGAATTTATAAATTAACATAGATAATCTAAGAACAAATTAAATACagggacaccagcaagattgtgaactaggaagccccagggagccctcgttccccgacctagacactgg-ttagtaataatctatgggcagaacagccggtgtaagaactccagaatccaattaggaagttgcagcacccgctgtgagtgcaaaacccagaagcgctacatctgagcaggtaagaaaaaaatgtcactgcattt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33569688 398 + 192294377 ----------TTCCT---------TCGTCTTATTATGTGAAGGTTATGATCTCACACCCAGAGTGCAGCAAACATTAAAACCTGGCATTATGAATGTGGATTCT---------TCCACagaacagattcctaaatcatggtatactatctaattaaatggaatattaaaatgaatgagctagaatttataaattaacatagataatctaagaacaAATTAAATACagggacaccagcaagattgtgaactaggaagccccagggagccctcgttccccgacctagacactgg-ttagtaataatctatgggcagaacagccggtgtaagaactccagaatccaattaggaagttgcagcacccgctgtgagtgcaaaacccagaagcgctacatctgagcaggtaagaaaaaaatgtcactgcattt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4330638 398 - 9440265 ----------TTCCT---------TCGTCTTATTATGTGAAGGTTATGATCTCACACCCAGAGTGCAGCAAACATTAAAACCTGGCATTATGAATATGGATTCT---------TCCACAGAACAGATTCCTAAATCATGGTATACTATCTAATTAAATGGAATATTAAAATGAATGAGCTAGAATTTATAAATTAACATAGATAATCTAAGAACAAATTAAATACagggacaccagcaagattgtgaactaggaagccccagggagccctcgttccctgacctagatactgg-ttagtaataatctatgggcagaacagccagtgtaagaactccagaatccaattaggaagttgcagcacccgctgtgagtgcaaaacccagaagcgctacatctgagcgggtaagaaaaaaatgtcactgcattt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16921532 398 - 21915920 ----------TTCCT---------TCGTCTTATTATGCGAAGGTTACGATCTCACACCCAGAGTGCAGCAAACATTAAAACCTGGCATTATGAATGTGGATTCT---------TCCACAGAACAGATTCCTAAATCATGGTATACTATCTAATTAAATGGAATAGTAAAATGAATGAGCTAGAATTTATAAATTAACATAGATAATCTATGAACAAATTAAATACagggacaccagcaagattgtgaactaggaagccccagggagccctcgttccccgacctagacactgg-ttagtaataatctatgggcagaacagccggtgtaagaactccagaatccaattaggaagttgcagcacccgctgtgagtgcaaaacccagaagcgccacatctaagcaggtaagaaaaaaatgtcactgcattt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 60828 398 - 21531802 ----------TTCCT---------TCGTCTTATTATGTGAAGGTTACCATCTCACACCCAGAGCGCAGCAAACATTAAAACCTGGCATTACGAATGTGGATTCT---------TCCACagaacagattcctaaatcatggtatactatctaattaaatggaatattaaaatgaatgagctagaatttataaattaacatagataatctaagaacaAATTAAATACagggacaccagcaagatcgtgaactaggaagcccaagggagccctcgttccccgacctagacactgg-ttagtaataatctatgggcagaacagccggtgtaagaactccagaatccaattaggaggttgcagcacccactgtgtgtaaaaaacccagaagtgccacatctgagcaggtaagaaaaaaaagtcactgcattt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 85014 398 - 2515279 ----------TTCCT---------TCATCTTATTATGTGAAGGTTACGATCTCACACCCAGAGTGCAGCAAACATTAAAACCTGGCATTATGAATGTGGATTCT---------TCCACAGAACAGATTCCTAAATCATGGTATACTATCTAATTAAATGGAATATTAAAATGAATGAGCTAGAATTTATAAATTAACATAGATAATCTAAGAACAAATTAAATACagggacaccagcaagattgtgaactaggaagccccagggagccctcgttccccgacctagacactgg-ttagtaataatctatgggcagaacagccggcgtaagaactccagaatccaattaggaagttgcagcaccagctgtgagtgcaaaacccagaagcgccacatctaagcaggtaagaaaaaaatgtcactgcattt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 241650 397 + 6586416 ----------TTCCT---------TCGTCTTATTATGTGAAGGCGACGATCTCACACCCAGAGTGCAGCAAACATGAAAACCTGGCATTACAAAGGTGGATTCT---------TCCACAGAACAGATTCCTAAATCATGGTATACTATCTAATTAAATGGAATATTAAAATGAATGGGCTAGAATTTATAAATTAACATAGACAATCTAAGAACAAATTAAATACaggggcaccagcaagatcatgaactaggaagccccagggagccctcgttccccaacctagacagtgg-ttagtaataatctacaagcagaacagccggtgtgagaactccagaattcaattaggaggttgcagcaccccctgtgagtgcaaaatccagaagcgccacatctgagcaggtaagaaaaaaa-gtcgctgtgttt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146608469 405 - 204313951 ----------TCACC---------TTGTCTCATTATGTGAAGGCTACCATCTCACACCCAGAGTGCAGCAAAAATTAAAACCTGGCATTATCAATGTGGTTCTTGCATTATcatccacagaagagatacctaaatcatagtatactatatgattaaatgggatattaaaatgaatgagctagaatttgtaaatcaaaatagataatccaagaacaAATTAAACACagggacatcagcaagatggtgaactaggaagccacagggagccctcattcccccaggtagacactgg-ttaacaataattcatggacaaaacagcctgggtgagaactacagaatccagttaggaggctgcagcaccc-ctgtgagtgcaaagcccagaagaacgatgtctgagcaggtatgaaaaaaa-gtcactgtattt i calJac3.chr2 I 5 C 0 s saiBol1.JH378296 317839 403 - 2409723 ----------TCACC---------TTGTCTCATTATGTGAAGGCTACCATCTCACACTCAGAGTGCAGCAATAATTAAAATCTGGCATTATCAATGTGGTTCTTGCATTATcatccacggaagagatacctaaatcatggtatactatctgattaaatgggatattaaaatgaatgagccagaatttataaatcaacatagataatctaagaacaAATTAAACACagggacatgagcaagatggtgaactaggaagccccagggagccctcgttcccccatgtagacactgg--taacaataattcatggacaata-attctgggtgagaactccagaatacagttaggaggctgcagcaccc-ctgtgagtgcacagcccagaacagcgacgtctgagcaggtatgaagaAAA-TTCACTGCATTT i saiBol1.JH378296 I 5 C 0 s cebCap1.NW_016107703v1 453252 404 - 2125214 ----------TCACC---------TTGTCTTATTATGTGAAGGCTACCATCTCACACTCAGAGTGCAACAAAAGTTAAAACCTGGCATTATCAATGTGGTTCTTGCATTATCATCCACAGAAGAGATACTTAAATCATGGTATACTATCTGATTAAATGGGATATTAAAATGAATGAGCTAGAATTTATAAATCAACATAGATAATCTAAGAACAAATTAAACAAagggacatcagcaagatggtgaactaagaagccccagggagccctcgttcccccacatagacactgg-ttaacaataa-tcatggacaaaacagcctgggtgagaactccagaatccagttaggaggctgcagcaccc-ctgtgtatgcaaagcccagaagaacgatgtctgagcaggtatgaaaaaaa-gtcactgcattt i cebCap1.NW_016107703v1 I 5 C 0 s aotNan1.NW_018514293v1 66977 403 + 376347 ----------TCACC---------TTGTCTCGTTATGTGAAGGCTACAATCTCACACCCAGAGCGCAGCAAAAATTAAAACCTGCCATTGTCAATGTGGTTCTT-CATTATCGTCCCCAGAAGAGATACGTAAATCACGGCACGCTATCTGATTAAACGGGATATTAGAGTGAATGAGCTAGAATTTATGAATCAACAAAGATAATCTAAGAAGAAATTAAACGCagggacatcggcaagacggtgacctgagaagccccaaggagcccccattcccccacgtagacactgg-ttcacaataactcatgcacaaagcagcctgggtgagaactccagaatccagtgagga-gctgcagcaccc-ctgtgagtgcaaagcccaggagagcgatgtctgagcaggtatgaagaAAA-GTCACTGCATTT i aotNan1.NW_018514293v1 I 19 I 100 s otoGar3.GL873611 2185900 397 - 8137123 gtcctttacctccctatgctgaggttatctccttatgtgaaaGTAAC-ATGTCACACTGTGAGTGTAGCAAAAATAAAACCCTGACATTATCAGTGTGGATTCA---------TTCACAGAGTAGATACCTAAATAATAGTACACTTTCTAATTACATAAAATACTAAAATGAATTAGCTAGTATTTATGAATCAACATAGCTTTTCTAAAAACAA---AAATAAATAgacatca-caagatcatgaagtaggaagc----------cttcatttcc--atgtaaacactggtttaacagcaaaatacagaccaaatagcctttgtgagaactcggaaattcaattaagaagtgatagcactctgtgtgagtgtgaatcccagaagagccacatcaaagcaggtaggaaaa----ttcattgtatct i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I a score=1538808.000000 s hg38.chr7_KI270899v1_alt 86724 236 + 190869 tgtgccctggtgcctactgctccctggca---tgataggagccctcaatgccctcaatgcttggctgctctctagagagggaga-gtgaagagtggaacatgcatccaatgttctcgcttttcagggggctg----cccatgggactggtatctgcctcacctgactcagagcactga-gggaaacttgcagagcttgaatgtcaggtaaggggctgctgagagcaaagacgagcatcttcgctc-------------------------------------------------------------------------- s panTro5.chrUn_NW_015974889v1 5511 237 + 17818 tgtgccctggtgcctactgctccctggca---tgataggagccctcaatgccctcaatgcttggctgctctctagagagggaga-gtgaagagtggaacatgcatccaatgttctcgcttttcagggggctg----cccatgggactggtatctgcctcacctgactcagagcactgagggggaacttgcagagcttgaatgtcaggtgaggggctgctgagagcaaagacaagcaccttcgctc-------------------------------------------------------------------------- i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 48039 235 - 432965 tgtgccctcgtgcctactgctccctggca---tgataggagccctcaatgccctcaatgcttggctgctccctagagagggaga-gtgaagagtggaacatgcatccaatgttctcgcttttcagggggctg-----ccatgggactggtatctgcctcacctgactcagagcactga-ggggaacttgcagagcttgaatgtcaggtgaggggctgctgagagcaaagacgagcaccttcgctc-------------------------------------------------------------------------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 104566 227 + 85365473 tgtgccctcatgccaactgctccctggca---cgataggagccctcaatgcc---------tggcttctctctagagagggaga-gagaagagtggaacatgcatccagtgttctcgcttttcagggagctg----cccatgggactggtatctgcctcacctgactcagagcactga-ggggaacttgcagagcttgaatgtcgggtgaggggctgctgagagcaaagacgagcaccttcgttc-------------------------------------------------------------------------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33953748 217 + 185818997 tgtgcacttgtgcctactgctccctggca---tgagaggagccctcaatgcc---------tggcttctctctagagagggaga-gagaagagtggaaca---------tgttctcccttttcagggggctt----cccatgggact-gtatctgcctcacctgactcagagcactga-ggggaacttgcagagtttgaatgtcgggtgaggggctgctgagagcaaagatgagcgctttcgttc-------------------------------------------------------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33570086 217 + 192294377 tgtgcacttgtgcctactgctccctggca---tgagaggagccctcaatgcc---------tggcttctctctagagagggaga-gagaagagtggaaca---------tgttctcgcttttcagggggctt----cccatgggact-gtatctgcctcacctgactcagagcactga-ggggaacttgcagagtttgaatgtcgggtgaggggctgctgagagcaaagatgagCGCTTTCGTTC-------------------------------------------------------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4331036 217 - 9440265 tgtgcacttgtgcctactgctccctggca---tgagaggagccctcaatgcc---------tggcttctctctagagagggaga-gagaagagtggaaca---------tgttctcgcttttcagggggctt----cccatgggact-gtatctgcctcacctgactcagagcactga-ggggaacttgcagagtttgaatgtcgggtgaggggctgctgagagcaaagatgagctctttcgttc-------------------------------------------------------------------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16921930 217 - 21915920 tgtgcacttgtgcctactgctccctggca---tgagaggagccctcaatgcc---------tggcttctctctagagagggaga-gagaagagtggaaca---------tgttctcgcttttcagggggctt----cccatgggact-gtatctgcctcatctgactcagagcactga-GGGGAACTTGCAGAGTTTGAATGTCGGGTGAGGGGCTGCTGAGAGCAAAGATGAGCGCTTTCGTTC-------------------------------------------------------------------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 61226 217 - 21531802 tgtgcacttgtgcctactgctccctggca---tgagaggagccctcaatgtc---------tggcttctctctagagaaggaga-gagaagagtggaaca---------tgttctcgcttttcagggggctg----cccatgggact-gtatctgcctcacctgactcagagcactga-ggggaacttgcagagtttgaatgtcgggtaaggggctgctgagagcaaagatgagCGCTTTCGTTC-------------------------------------------------------------------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 85412 217 - 2515279 tgtgcacttgtgcctactgctccctggca---tgagaggagccctcaatgcc---------tggcttctctctagagagggaga-gagaagagtggaaca---------tgttctcgcttttcagggggctt----cccatgggact-gtatctgcctcatctgactcagagcactga-ggggaacttgcagagtttgaatgtcaggtgaggggctgctgagagcaaagatgagcgctttcgttc-------------------------------------------------------------------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 242047 216 + 6586416 tgtgcccttgtgcctactgctccctggca---tgagaggagccctcaatgcc---------tggcttctctctagagagggaga-gagaagagtggaaca---------tgttctcgcttttcagggggctg----cccac-ggact-gtatctgcctcacctgactcagagcactga-ggggaacttgcagagtttgaatgtcaggtgaggggctgctgagagcaaagatgagcgctttcattc-------------------------------------------------------------------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146608874 215 - 204313951 ----------------gtcctctctggca---tgataggaaacctcaatgtc---------tggcttctctctaaagaggggaa-gagaagcgtggaacatgcatccagtgttctggcttttcagggggcttccttcccatgggatgggtatctgtctcacatgactcagagaactca-tgggaacttgcagagcttgaacattgggttaggggttgctgagagcaaagatgagcaccttcagtc-------------------------------------------------------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 318242 215 - 2409723 ----------------GTCCTCTCTGGCG---TGATAGGaaatctcaatgcc---------tagcttctctctaaagagtggga-gagaagagtggaacatgcatccagtgtcctggcttttcagggggcttccttcccatgggatgggtatctgtctcacaggattcagagagctca-cggggacttgtggagcttgaatgtcggggtaggggctgctaagagcgaagatgagcaccttcagtc-------------------------------------------------------------------------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 453656 215 - 2125214 ----------------gtcctctctggca---tgataggaaacctcaatgcc---------tggcttctctctaaagaggggaa-gagaagagtggaacatgcatccaatgttctggcttttcagggggctttcttcccatgggatgggtatctgtctcacatgactcagagaactca-tgggaacttgcagagcttgaacgtcgggttaggggctgctgagagcaaagatgagcacattcagtc-------------------------------------------------------------------------- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2186297 295 - 8137123 tgtgttcttaagcttcttcttcctttgcacagcaacagaaacttccaacttc---------taggttttctctgaagaggggcaggagaagagttggacgtgcatttcatggtctggattttcagggggctt----cccatgggactAGCATGCATAT-ACCCAACTCA----------GATGAACTTGCATAGTCTGAATGTCAGGTTGGGATCTGCTGAGAACAAAGATGAACACTGTCATTTCtttctttctttttttttttagagacagagtctcactttgtcaccattggtagagtgccatggtgtcatagctc i otoGar3.GL873611 C 0 I 214 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=1939872.000000 s hg38.chr7_KI270899v1_alt 86960 244 + 190869 agcacaaagGATCCTGCGGAGCC----ACAGACACCAGAGGACAGA--------GGCCTCCTGAAAAA--------CATGGGCAAAACTCT----AACTGGGAAACTACTtacac----aagcccaaagaagatgcatccccagaaaagg-ctgagaag-ttccagaatctctacctgggctgattagtgaaagtacaaagcaagttaacaaagactgcgggaagc-acaatgt-atttgaaatgcccaaatatcaatacaaggtcacaaggcata s panTro5.chrUn_NW_015974889v1 5748 244 + 17818 agcacaaagGATCCTGCGGAGCC----ACAGACACCAGAGGACAGA--------GGCCTTCTGAAAAA--------CACGGGCAAAACTCT----AACTGGGAAACTACTtacac----aagcccaaagaagatgcatccccagaaaagg-ctgagaag-ttccagaatctctacctgggctgattagtgaaagtacaaagcaagttaacaaagactgcgggaagc-acaatgt-atttgaaatgcccaaatatgaatacaaggtcacaaggcata i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 48274 244 - 432965 agcacaaagGATCCTGCGGAGCC----ACAGACACCAGAGGACAGA--------GGCCTCCTGAAAAA--------CACGGGCAAAACTCT----AACTGGGAAACTACTtacac----aagcccaaagaagatgcatccccagaaaagg-ctgagaag-ctccagaatctctacctgggctgattagtgaaggtacaaagcaagttaacaaagactgcgggaagc-acaatgt-atttgaaatgcccaaatatcaatacaaggtcacaaggcata i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 104793 244 + 85365473 agcacaaagGAGCCTGCGGAGCC----ACAGACACCAGAGGACAGA--------GGCCTCCTGAAAAA--------CAGGGGCAAAACTCC----AACCGGGAAATTACTtacac----aagcccaaagaagatgcatccccagaaaagg-ctgagaag-ttccagaatctctacctgggctgattagtgaaggtacaaagcaagttaacaaagaccgcaggaagt-ccaattt-atttgaaatgctcaaatatcaatacaagatcacaaggcata i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33953965 246 + 185818997 agcacaaagGAGCCTGCAGAGCC----ACAGACACCAGAAGACCGA--------GGCCTCCTGAAAAC--------CAGGGGCAAAATTCT----CACTGGGAAGTTACTTACAC----AAGCCCAAAGAAgatgcatccccagaaaagg-ctgagaagtttccagaatctctacctgggctgattagtgaaggtacaaagccagttaatgaagacagcgagaagtggcaattt-atttgaaatgcgaaaatatcaatacaagatcacaaggcata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33570303 246 + 192294377 AGCACAAAGGAGCCTGCAGAGCC----ACAGACACCAGAAGACCGA--------GGCCTCCTGAAAAC--------TAGGGGCAAAATTCT----CACTGGGAAGTTACTTACAC----AAGCCCAAagaagatgcatccccagaaaagg-ctgagaagtttccagaatctctacctgggctgattagtgaaggtacaaagccagttaatgaagacagcgagaagtggcaattt-atttgaaatgcgaaaatatcaatacaagatcacaaggcata i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4331253 246 - 9440265 agcacaaagGAGCCTGCAGAGCC----ACAGACACCAGAAGACCGA--------GGCCTCCTGAAAAC--------CAGGGGCAAAATTCT----CACTGGGAAGTTACTTACAC----AAGCCCAAagaagatgcatccccagaaaagg-ctgagaagtttccagaatctctacctgggctgattagtgaaggtacaaagccagttaatgaagacagcgagaagtggcaattt-atttgaaatgcgaaaatatcaatacaagatcacaaggcata i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16922147 246 - 21915920 AGCACAAAGGAGCCTGCAGAGCC----ACAGACACCAGAAGACCGA--------GGCCTCCTGAAAAT--------CAGGGGCAAAATTCT----CACTGGGAAGTTACTTACAC----AAGCCCAAAGAAGATGcatccccagaaaagg-ctgagaagtttccagaatctctacctgggctgattagtgaaggtacaaagccagttaatgaagactgcgagaagtggcaattt-atttgaaatgcgaaaatatcaatataagatcacaaggcata i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 61443 246 - 21531802 AGCACAAAGGAGCCTGCAGAGCC----ACAGACACCAGAGGACTGA--------GGCCTCCTGAAAAT--------CAGGGGCAAAACTCT----AACTGGGAAGTTACTtacac----aagcccaaagaagatgcatccccagaaaagg-ctgagaagtttccagaatctctacctgggctgatcagtgaaggtacaaagccagttaacaaagactgcgagaagtggcaattt-atttgaaatgccaaaatatcaatacaagatcacaaggcgta i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 85629 246 - 2515279 agcacaaagGAGCCTGCAGAGCC----ACAGACACCAGAAGACCGA--------GGCCTCCTGAAAAT--------CAGGGGCAAAATTCT----CACTGGGAAGTTACTTACAC----AAGCCCAAAGAAgatgcatccccagaaaagg-ctgagaagtttccagaatctctacctgggctgattagtgaaggtacaaagccagttaatgaagactgcgagaagtggcaattt-atttgaaatgcgaaaatatgaatataagatcacaaggcata i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 242263 243 + 6586416 agcacaaagGAGCCTGCAGAGCC----GAAGACACCAGAGGACCGA--------GGCCTCCTGAAAAT--------CAGAGGCAAAACTCT----CACGGGGAAGTTACTTACAC----AAGCCCA---AAgatgcatccccagaaaagg-ctgacaagtttccagaatctctacctgggctgatcagtgaaggtacaaagccagttaacgaagaccacgagaagcgacaattt-atttgaaatgcccaaatatcaatacaagatcacaaggcgta i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146609089 246 - 204313951 agcacaaagGAAGCTGCAGGGTC----ACAGACACCAGAGGACAGA--------GGCCTCCTAAAAAA--------CAGGGGCACAACTCT----Aactgggaaattccttacac----aagcccaaagaagatgcatccccagaaaagg-ctgagaagttcccagaatctctacccacactgattagtgaaggtacaaagccggttaacaaagactatgggaagtggcaattt-atttggaatgcccaaatattaatacaagatcacaaggcata i calJac3.chr2 C 0 I 2 s saiBol1.JH378296 318457 246 - 2409723 agcacaaagGAAGCTGCAGGGTC----ACAGACACCAGAGGACAGA--------GGCCTCCTGAAAAA--------CAGGGGCAAAACTCT----Aactgggaaattccttacac----aagcccaaagaagatgcatccccagaaaagg-ctgagaagttcccagaatctctacccgcaccaattagtgaaggtacaaagcctgttaacaaagactatgggaagtggcaattt-atttggaatgcctaaatattaatacaagatcacaaggcata i saiBol1.JH378296 C 0 I 6 s cebCap1.NW_016107703v1 453871 246 - 2125214 agcacaaagGAAGCTGCAGGGTC----ACAGACACCAGAGGATAGA--------GGCCTCCTGAAAAA--------CAGGGGAAAAACTCT----AACTGGGAAATTCCTTACAC----AAGCCCAAagaagatgcatccccagaaaacg-ctgagaagttcccagaatctctacccgtgctgattagtgaaggtacaaagccagttaacaaaaactataggaagcggcaattt-atttgaaatgcccaaatattgatacaagatcacaaggcata i cebCap1.NW_016107703v1 C 0 I 4298 s otoGar3.GL873611 2186806 276 - 8137123 AGCACAAAGGACACTACAGTGCCTTAGAAAGATACCAGGGGAGTAAGAGATTATGGGCTCTTAAAAAAAAAAAACCCAAGGGCAAATCTCTAACCAACTGGGAAATTATATACACAATGAAGTACAAAGAAGATGCAGCCCCAGACaaggtttaagaggttcccagaatatctgcctgggttgattaatgaaggtacagagctagcccataaagagtgtgagaggtgacaattcaagttaaaacacccaaatattaataaaacatcacaaagcata i otoGar3.GL873611 I 214 C 0 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=2575025.000000 s hg38.chr7_KI270899v1_alt 87204 445 + 190869 caaagaaacaggaaaccaaggcccagtcaaaggaacaaaatatatctcaggaaatgaccgtaaagacacaga--gat----gaattaactgatcattcaaggtaaccttcttaaagatgcccagtgagctaaacaagaacagagacaa---ctgaacgaattcagaat--acgacttatgaac-aaaatg-agataacaacagagatagaaat-tataaaaactgaacaaaacagaaattcggaaactgaagaataactgaattttaa-gatcaatagaggagttcaacagc-aga-cttgatcatg--gagaaagaa--ccatcaaatttgaagaaaaattatctgaaattattgagtgagaggag------ggaaaaaaagcat-aaagaaagtaatgagagcctgtgagacttacgggaaaacatcaggcagaacAATG-GAGGTTTT-Ttaccccagagacgct--gtgggtt s panTro5.chrUn_NW_015974889v1 5992 451 + 17818 caaagaaacaggaaaccaaggcccagtgaaaggaacaaaatatatctcaggaaatgaccgtaaagacacaga--gat----gaattaactgatcattcaaggtaaccatcttaaagatgcccagtgagctaaacaagaacagagacaaaacatgaacgaattctgaat--acgacttatgaacaaaaatgaagatatcaacagagatagaattatataaaatccgaac-aaacagaaattcgcgaactg-agaa-aactgaattttaa--ataaataga-gagttcaacagcaagatcttgatcacgacgagaaagaattccatcaaa-ttgaag-aaaattatctgaaattattgagtg-gaggag------gg--aaaaagcataaaagaaagtaatgagagcctgtgagacttacggg-aaccatcaggcagaacaatatGAGGTGTTATTTACCCAGAGACGCCTAGTGGGTT i panTro5.chrUn_NW_015974889v1 C 0 I 10 s gorGor5.CYUI01015914v1 48518 446 - 432965 caaagaaacaggaaaccaaggcccagtcaaaggaacaaaatatatctctggaaatgaccataaagacacaga--gat----gaattaactgatcattcaaggtaaccatcttaaagatgcccagtgagctaaacaagaacagagacaa---ctgaacgaattcagaat--acgacttatgaacaaaaatg-agatatcaacagagatagaaat-tataaaaaccgaacaaaacagaaattcggaaactgaagaataactgaattttaa-aatcaatagaggagttcaacagc-aga-cttgatcacg--gagaaagaa--ccatcaaatttgaagaaaaattatctgaaattattgagtgagaggag------ggaaaaaaagcat-aaagaaagaaatgagagcctgtgagacttacgggaaaccatcaggcagaacAATG-GAGGTTTT-Ttaccccagagacgct--gtgggtt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 105037 441 + 85365473 caaagaaacaggaaaccaaggcccagtcaaatgaacaacatatatctctggaaatgacc-taaagaaacaga--gat----gaattaactgaccattcaagataaccatcttaaagatgcccagtgagctaaacgagaacatagacaa---ctgaacgaattcagaat--atgacttatgaacaaaaatgagaatatcaacagag--agaaat-tatacaaagagaacaaaacagaaactctgaaactgaagaataatcaaattttaaaaatcagtagaggagttcaacagc-aga-cttgatcaag--aagaaagaa--tcatcaaagttgaagaaaaattatctgaaattattgagtgagaggag------ga-aaaaaagcat-aaggaaagtactgagagcctacgagacttacaggaaaccatcgagcagaatgacg-gaggt----atgcctcagagatgtt--gtgggtt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33954211 439 + 185818997 caaagaaacgggaagccaaggcccagtcaaaggaacaaaata-atctctggaaatgaccctaaagaaacaga--gat----gaattaactgaccattcaagataaccatcttaaagacgcccagtgagctaaatgagaacacagacaa---ctaatcactttcagaat--atgatttatgaacaaaaacaagaatatcaacagagatagaaat-tataaaaagagaacaaaacagaaattctgaaactgaagaataattgaattttaaaactcagtagaggagttcaacagc-aga-cttggtcaag--aagaaagaa--tcatcaaatttgaagaaaagttatctgaaattattgagtgagaggag------aaaaaaaaagaat-----taagtagtgagagcctacgagacttacaggaaaccatcaagcagaaTAATG-TGGG-----TAacctcagaaatgtt--aagggtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33570549 439 + 192294377 caaagaaacgggaagccaaggcccagtcaaaggaacaaaata-atctctggaaatgaccctaaagaaacaga--gat----gaattaactgaccattcaagataaccatcttaaagacgcccagtgagctaaatgagaacacagacaa---ctaatcactttcagaat--atgatttatgaacaaaaacaagaatatcaacagagatagaaat-tataaaaagagaacaaaacagaaattctgaaactgaagaataattgaattttaaaactcagtagaggagttcaacagc-aga-cttggtcaag--aagaaagaa--tcatcaaatttgaagaaaagttatctgaaattattgagtgagaggag------aaaaaaaaagaat-----taagtagtgagagcctacgagacttacaggaaaccatcaagcagaaTAATG-TGGG-----TAacctcagaaatgtt--aagggtt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4331499 439 - 9440265 caaagaaacgggaagccaaggcccagtcaaaggaacaaaata-atctctggaaatgaccctaaagaaacaga--gat----gaattaactgaccattcaagataaccatcttaaagacgcccagtgagctaaatgagaacacagacaa---ctaatcactttcagaat--atgatttatgaacaaaaacgagaatatcaacagagatagaaat-tataaaaagagaacaaaacagaaattctgaaactgaagaataattgaattttaaaactcagtagaggagttcaacagc-aga-cttggtcaag--aagaaagaa--tcatcaaatttgaagaaaagttatctgaaattattgagtgagaggag------aaaaaaaaagaat-----taagtagtgagagcctacgagacttacaggaaatcatcaagcagaaTAATG-TGGG-----TAacctcagaaatgtt--aagggtt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16922393 439 - 21915920 caaagaaacgggaagccaaggcccagtcaaaggaacaaaata-atctctggaaatgaccctaaagaaacaga--gat----gaattaactgaccattcaagataaccatcttaaagacgcccagtgagctaaatgagaacacagacaa---ctaatcactttcagaat--atgatttatgaacaaaaacgagaatatcaacagagatagaaat-tataaaaagagaacaaaacagaaattctgaaactgaagaataattgaattttaaaactcagtagaggagtccaacagc-aga-cttgatcaag--aagaaagaa--tcatcaaatttgaagaaaaattatctgaaattattgagtgagaggag------aaaaaaaaagaat-----taagtagtgagagcctacgagacttacaggaaaccatcaagcagaaTAATG-TGGG-----TAacctcagagatgtt--aagggtt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 61689 438 - 21531802 caaagaaacgggaagccaaggtccagtcaaggtaacaaaata-atctctggaaatgaccctaaagaaacaga--gat----gaattaactgaccattccggataaccatcttaaagatgcccagtgagctaaatgagaacatagacaa---ctaatcacattcagaat--ataatttatgaacaaaaacaagaatatcaacagagatagaaat-tataaaaagagaacaaaacagaaattctgaaaccgaagaataattgaattttaaaactcaatagaggagttcaacagc-aga-cttggtcaag--aagaaagaa--tcatcaaatttgaagaaaaattatctgaaattattgaatgagaggag-------aaaaaaaagaat-----taagtaatgagagcctatgagacttacaggaaaccatcaagcagaaTAATG-TGGG-----TAacttcagagatgtt--aagggtt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 85875 439 - 2515279 caaagaaacgggaagccaaggcccagtcaaaggaacaaaata-atctctggaaatgaccctaaagaaacaga--gat----gaattaactgaccattcaagataaccatcttaaagacgcccagtgagctaaatgagaacacagacaa---ctaatcactttcagaat--atgatttatgaacaaaaacgagaatatcaacagagatagaaat-tataaaaagagaacaaaacagaaattctgaaactgaagaataattgaattttaaaactcagtagaggagttcaacagc-aga-cttgatcaag--aagaaagaa--tcctcaaatttgaagaaaaattatctgaaattattgagtgagaggag------aaaaaaaaagaat-----taagtagtgagagcctacaagacttacaggaaaccatcaagcagaaTAATG-TGGG-----TAacctcagagatgtt--aagggtt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 242506 438 + 6586416 caaagaaacgggaagccaaggcccagtcaaaggaacaaaatc-atctctggaaatggccctaaagagacaga--gac----gaattaactgaccgttcaagataaccatcttaaagacgcccagtgagctaaatgagaacacagacaa---ctaatcacattcagaat--ctgatttacgaacaaaaacgagaatatcaacagagatagaaat-tataaaaagagaacaaaacagaaattctgaaaccgaagaataattgaactttaaaactcaatagaggagttcaacagc-aga-cttggtcaag--aagaaagaa--tcatcaaatttgaagaaaaattatctgaaattaatgagtgagaggag-------aaaaaaaataat-----taagtagtaagagtctacgagacttacaggaaaccgtcacgcagaaTAATG-TGGG-----TAacctcagagatgtt--aagggtt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146609337 443 - 204313951 aaaaaaaacaggaaaccatggcccagtcaaaggaacaaaataaatctccataaatgaccctaaagaaacaga--gatcaatgaattaactgaacattcacgataaccatcttaaaaatgctc-atgagctaaatgagaacatagacaa---ctatgtgaattcagaaa--atgatttatgaacaaaaatgagaatatctgcagagacagaaat-tat--gaagagaacaaaacagaaattctgaaactgaagaataattgaattttaaaaatcaatagaggagttcaacagc-aga-cttgatc-tg--aagaaagaa--tcagcaaagttgaagaaaaagtgtctgaaattattaagtgggaggag---------aaaaaataattaggaaaagtaatgaaagcctatgatacttgcagaaaaccatcaagtagaataatg-caggt----atacctcagagatatt--gtgggtt i calJac3.chr2 I 2 C 0 s saiBol1.JH378296 318709 438 - 2409723 aaaaaaaaaaggaaagcatggcccagtcaaaggaacaaaatacatctctgaaaatgaccctaaagaaacaga--gatctacgaattatctgagcatttcagataaccatcttaaaaatgctc-gtgagctaaatgagaacatagacaa---ctacatgaatcccaaaa--atgatttatgaacaaaaataagaatatctacagagac--aaat-tactaaaagagaacaaaac--aaattctgaaactgaagaataattgaattttaaaaatcaatagaggagttcaacagc-aga-cttaa----g--aaggaagaa--tcagcaaagttgaagaaaaatcatctgaaattattgagtgggaggag---------aaaaaataattaagaaaagtcatgagcacctacaagacttgcaggaaaccatcaagcagaaTAATG-caggt----atacctcagatatatt--gtgggtt i saiBol1.JH378296 I 6 C 0 s otoGar3.GL873611 2187082 421 - 8137123 caaagaaacatggaaacatggctcaatcaaaggaataaaataaatctctagaaatgacacttatgaaacagatctat----gaagtatttgacaattcaaaataaccatcttaaggatattca---agctaaaagagaagactgataa---ttaagtgaatttagaaaagatgactgatgaacaaaatgagaattatcaacagagatagaaat-cataaaaa-agaactaaaaagaaattctggaactgaagaa-----------------------------tcttacagt-tga-atcaa-gaag--aagaaaaaa--atagcaagtttgaa-acagatcatttgaagttattgagtgagaggaagcaaacagaaaacaagaatgaagacagttcaagagagactaagggacttacaggaaaccatcaagctaacgaaTG-cagtc----aaaccttggagatatt--gcagggt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I a score=33858.000000 s hg38.chr7_KI270899v1_alt 87649 5 + 190869 tgatc s gorGor5.CYUI01015914v1 48964 5 - 432965 tgatc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 105478 5 + 85365473 tgatc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33954650 5 + 185818997 tgatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33570988 5 + 192294377 tgatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4331938 5 - 9440265 tgatc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16922832 5 - 21915920 tgatc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 62127 5 - 21531802 tgatc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 86314 5 - 2515279 tgatc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 242944 5 + 6586416 tgatc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146609780 5 - 204313951 tgatc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 319147 5 - 2409723 tgatc i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2187503 5 - 8137123 tggtt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e panTro5.chrUn_NW_015974889v1 6443 10 + 17818 I a score=1080054.000000 s hg38.chr7_KI270899v1_alt 87654 186 + 190869 ccaggccactgccata-atgtgaata-ccacagc-aaggtgagtca-caaa----atat-tttggtttcc--cggcgcatataaaagtaatg-attatactata-ctgtagcctgttaattgtgcaatagcattat-gtat------aaaaaagtatatacc--ttaatgaaa-atactttc---tttggctaaaaatgctaatgat-catct s panTro5.chrUn_NW_015974889v1 6453 199 + 17818 ccaggccactgcaatatatgtgaatacccacagctaaggtgagtcagcaaaaattatct-tttggtttcctgcggcgcatataaaagtaatgaattatactatacctgtag-ctgttaattgtgca--tgcattatagtat-------aaaaagtatatacctataaataaaagatactttc---tttgctaaaaaatgtaaatgatccatct i panTro5.chrUn_NW_015974889v1 I 10 I 15 s gorGor5.CYUI01015914v1 48969 185 - 432965 ccaggccactgccgta-atgcgaata-ccacaac-aaggtgagtca-caaa----atat-tttggtttcc--cggcgcatataaaagtaatg-attatactata-ctgtagtctg-taattgtgcaatagcattat-gtat------aaaaaagtatatacc--tcaatgaaa-atactttc---tttggctaaaaatgctaatgat-catct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 105483 188 + 85365473 ccagaccactgccata-atgtgaata-tcgcaac-aaagtgaatca-caaa----atat-tttggcttcc--cggcacacgtaagagtaatg-attatactata-ctgtagcctgttaattgtgcaatagcattat-gtct----aaaaaaaagtatatacc--ttaattaaa-gtactttt---tttggctaaaaatgctgatgat-catct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33954655 193 + 185818997 ccagaccactgccata-atgtgaata-tcacagc-aaagtgaatca-caca----atat-tttggtttcc--tggcgcatataaaagtgatg-attatactata-ctgtagtctgttaattgtgcaatagcgttat-gtct--aaaaaaaaaagtatatacc--ttaattaaa-atccttttttgttttgctgaaaatgctaatgat-catct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33570993 195 + 192294377 ccagaccattgccata-atgtgaata-tcacagc-aaagtgaatca-caca----atat-tttggtttcc--tggcgcatataaaagtgatg-attatactata-ctgtagtctgttaattgtgcaatagcgttat-gtctaaaaaaaaaaaagtatatacc--ttaattaaa-atccttttttgttttgctgaaaatgctaatgat-catct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4331943 194 - 9440265 ccagaccattgccata-atgtgaata-tcacagc-aaagtgaatca-caca----atat-tttggtttcc--tggcgcatataaaagtgatg-attatactata-ctgtagtctgttaattgtgcaatagcgttat-gtct-aaaaaaaaaaagtatatacc--ttaattaaa-atccttttttgttttgctgaaaatgctaattat-catct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16922837 190 - 21915920 ccagaccattgccata-atgtgaata-tcacagc-aaagtgaatca-caca----atat-tttggtttcc--tggtgcatat-aaagtgatg-attatactata-ctgtagtctgttaattgtgcaatagcgttat-gtct----aaaaaaaagtatatacc--ttaattaaa-atccttttctgttttgctgaaaatgctaatgat-catct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 62132 192 - 21531802 ccagaccattgccata-atgtgaata-tcacaac-aaagtgaatca-caga----atat-tttggtttcg--tggcacatataaaagtaatg-attatactata-ttgtagtctgttaattgtgcaatagcgtcgt-gtct---taaaaaaaagtatatacc--ttaattaaa-atccttttttgttttgctgaaaatgctaatgat-catct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 86319 192 - 2515279 ccagaccattgccata-atgtgaata-tcacagc-aaagtgaatca-caca----atat-tttggtttcc--tggcgcatataaaagtgatg-attatactata-ctgtagtctgttaattgtgcaatagcgttat-gtct---aaaaaaaaagtatatacc--ttaattaaa-atccttttttgttttgctgaaaatgctaatgat-catct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 242949 191 + 6586416 ccagaccattgccata-atgtgacta-tcacagc-aaagtgaatca-caaa----atat-tttggtttcc--tggcgcatataaaagtgatg-attatactata-ctgtagtctgttaattgtgcaatagcgttgt-gtct----aaaaaaaagtatatacc--ttaattaaa-atccttttttgttttgctgaagacgctaatgat-catct i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146609785 185 - 204313951 ccaggccactgctatc-atgtgaata-tcac--a-acagtgaatca-caaa----atat-tttggtttcc--cagtgcacataaaagtaatg-actatactata-ctgtagtctgttaattgtgcaatagcattat-gtct-----aaaaaatgtatatgcc--ttaattaaa-atactttg---ttttgctaaaaatgctaatgat-tgtct i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 319152 185 - 2409723 ccaggccactgctatc-atgtgaatg-tcacaaa-aaagtgaatca-caaa----atat-tctggtttcc--cagtgcacataaaaataatg-actacactata-atgtagtc--ttaattgtgcaataacattat-gtct-----aaaaaatgtatatacc--ttaattaaa-atattttg---ttttgctaaagacgctaatgac-cgtct i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2187508 187 - 8137123 atggacc--tgtaaaa-aggctcata-ccacaat-aaaacaagtca-tgta----atttgtttgatttcc--cagtgcacatacaaattata-tttatactgtc-ttgtaacctattaa-tgtgcaatagcattat-gtct--aaaaatataaacatatata--ttaattaaaaatact------ttttgctaaaaatggtaacaatccatct i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I a score=101280.000000 s hg38.chr7_KI270899v1_alt 87840 15 + 190869 aagccttcaacaagt s gorGor5.CYUI01015914v1 49154 15 - 432965 gggccttcaacaagt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 105671 15 + 85365473 gagccttcaacaagt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33954848 15 + 185818997 gagccttcaacaagt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33571188 15 + 192294377 gagccttcaacaagt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4332137 15 - 9440265 gagccttcaacaagt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16923027 15 - 21915920 gagccttcaacaagt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 62324 15 - 21531802 gagccttcaacaagt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 86511 15 - 2515279 gagccttcaacaagt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 243140 15 + 6586416 gagccttcaacaagt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146609970 15 - 204313951 gagccttcaacaagt i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 319337 15 - 2409723 gagccttcaacaagt i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2187695 15 - 8137123 gagccttaagtgagt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e panTro5.chrUn_NW_015974889v1 6652 15 + 17818 I a score=74143.000000 s hg38.chr7_KI270899v1_alt 87855 11 + 190869 cataatttttt s panTro5.chrUn_NW_015974889v1 6667 11 + 17818 cataatttttt i panTro5.chrUn_NW_015974889v1 I 15 C 0 s gorGor5.CYUI01015914v1 49169 11 - 432965 cataatttttt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 105686 11 + 85365473 cataatttctt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33954863 11 + 185818997 catactttttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33571203 11 + 192294377 catactttttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4332152 11 - 9440265 catactttttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16923042 11 - 21915920 catactttttc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 62339 11 - 21531802 cgtactttttt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 86526 11 - 2515279 catactttttt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 243155 11 + 6586416 catactttttt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146609985 11 - 204313951 tataatttttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 319352 11 - 2409723 tataatttttt i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2187710 11 - 8137123 cataatttttt i otoGar3.GL873611 C 0 I 9492 e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I a score=992213.000000 s hg38.chr7_KI270899v1_alt 87866 184 + 190869 ca--tgatgggggctc-ttacctcagtgttgatgt-ctgctaac-tgatcagcgtggcagttgctgaagactggggtaa-ccgtgacaatttcttaagacaacaatgaattttgc-tctt---caatggactcttt------cctt--cacaaaagacttatctgcggtatgt-aatgtcgtttca-cagcattttactcacag s panTro5.chrUn_NW_015974889v1 6678 202 + 17818 caatagatgggggctctttaccctcatgttgatgtactgctaacgtgataggcgtggcagttgctgaagactggggtaatccgtgacaatttcttaagacaacaatgaattttgc-tcttgcagaatggactcattgtgctatctttacacaaaagacttatctgcggtatgtgaatgtcgttcaa-cagcatttcacccacag i panTro5.chrUn_NW_015974889v1 C 0 I 49 s gorGor5.CYUI01015914v1 49180 184 - 432965 ca--tgatgggggctc-ttacctcagtgttgatgt-ctgctaac-tgatcagcgtggcagttgctgaagaccggggtaa-ccgtgacaatttcttaag-caacaatgaattttgc-tctt---caatggactcttt------cttt--cacaaaagacttatctgcggaatgt-aatgtcgtttcaccagcattttacccacag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 105697 166 + 85365473 cc--tgatgggggctc-ttagctcagtgttgacgt-ctgctaac-tgatcagtgtggcagttgctgaagactggggtaa-tcgtgacaatttcttaagacaacaatgaattttgc-tctt---cagtggactcttt-----------------------tatctgcagtatgt-aat---gtttca-cagcattttacccacag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33954874 185 + 185818997 ca--tgatgggggctc-ttacctcagtgttgatgt-ctgctcac-tgatcagcgtggtagttgctgaagactggggtaa-ctgtgagaatttcttaagacaacagtgaattttgcctcat---cagcggactcttt------cttt--cccagaggacttatctgcactatgt-aatgtggtttca-cagcatttgacccacag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33571214 185 + 192294377 ca--tgatgggggctc-ttacctcagtgttgatgt-ctgctcac-tgatcagcgtggtagttgctgaagactggggtaa-ctgtgagaatttcttaagacaacagtgaattttgcctcat---cagcggactcttt------cttt--cccagaggacttatctgcactatgt-aatgtggtttca-cagcatttgacccacag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4332163 185 - 9440265 ca--tgatgggggctc-ttacctcagtgttgatgt-ctgctcac-tgatcagcgtggtagttgctgaagactggggtaa-ctgtgagaatttcttaagacaacagtgaattttgcctcat---cagcgtactcttt------cttt--cccagaggacttatctgcactatgt-aatgtggtttca-cagcatttgacccacag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16923053 185 - 21915920 ca--tgatgggggctc-ttacctcagtgttgatgt-ctgctcac-tgatcagcgtggtagttgctgaagactggggtaa-ctgtgagaatttcttaagacaacagtgaattttgcctcat---cagcagactcttt------cttt--cccagaggacttatctgcactatgt-aatgtggtttca-cagcatttgacccacag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 62350 185 - 21531802 ca--tgatgggggctc-ttacctcagtgttgatgt-ctgctcac-tgatcagcatggtagttgctgaagactggggtga-ctgtgagaatttcttaagacaacagtgaattttgcgtcat---cagtggactcttt------cttt--cccagaggacttatctgcactatgc-aatgtggtttca-cagcatttgacccacag i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 86537 185 - 2515279 ca--tgatgggggctc-ttacctcagtgttgatgt-ctgctcac-tgatcagcgtggtagttgctgaagactggggtaa-ctgtgagaatttcttaagacaacagtgaattttgcctcat---cagcggactcttt------cttt--cccggaggacttatctgcactatgt-aatgtggtttca-cagcatttgacccacag i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 243166 185 + 6586416 ca--tgatgggggctc-gtacctcagtgttgatgt-ctgctcac-tgatccgcgtggtagttgctgaagactggggtga-ctgtgagaatttcctaagacaacagtgaattttgcctcat---cagcggactcttg------cttt--cccagaggacttatctgcactatgt-aatgtggtttca-cagcgtttgacccacag i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146609996 176 - 204313951 ca--tgat-ggggctc-tttcctcagtgttgatgt-ctgctaac-tgatcagtgtagtagttgctgaagactggggtaa-ctg--------tcttaagacaacaatgaattttgtctcat---caattgactcttg------cttt--cataaaagacttatctgcagtatgt-aatgttgtttca-tcgcattttacccacag i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 319363 174 - 2409723 cg--tggt-ggggccc-tttcctcagcgtcgatgt-ctgctaac-tgattggtgtggtagttgctgaagacgggggtaa-ctg--------cctta--ttaacaatgaattttgcctcat---caattgactcttg------cttt--catggaagacttatctgcagtatgt-catgttgtttca-tagcatttgacccacag i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I a score=135980.000000 s hg38.chr7_KI270899v1_alt 88050 24 + 190869 tagaacctctttcaaatttggagc s gorGor5.CYUI01015914v1 49364 24 - 432965 tagaacctctttcaaatttggagc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 105863 24 + 85365473 tagaacttctttcaaatttgcagc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33955059 24 + 185818997 tagaacttctttcaaatttggagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33571399 24 + 192294377 tagaacttctttcaaatttggagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4332348 24 - 9440265 tagaacttctttcaaatttggagc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16923238 24 - 21915920 tagaacttctttcaaatttggagc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 62535 24 - 21531802 tagaacttctttcaaatttgaagc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 86722 24 - 2515279 tagaacttctttcaaatttggagc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 243351 24 + 6586416 tagaacttctttcaaatttggagc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146610172 24 - 204313951 tggaacttctttcaaaattggagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 319537 24 - 2409723 tggaacttctttcaaaattggagc i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e panTro5.chrUn_NW_015974889v1 6880 49 + 17818 I a score=2570251.000000 s hg38.chr7_KI270899v1_alt 88074 465 + 190869 cagtcctctcaaaccctgctgctgcttta-------------tgtaatattctgaataccttgttgtcacttcaagaatgtt-----tgtctctaccagga-gtagattccatctcaaaaaacaactttctttgctcat--tcgt-aaggagaaactcctcattcattaaagttttaccctgag-attgcagcaattcagccacatcgtcaggctcctcttctcattccagttgtctca--ccgtttcc-a-ccatctgcagttcctgcctcc-attaaagtcttgaaccactcagagtca--cctgtg-agggctgggattaaatccctgcagactcct-gttcatgttgat--attttgcctcctcccatga-aacagg-aacgttcttaatggcatgtagagtggtgaactactt-ccag-aaggc--attccattcgctttg-ttcggatccagcagagcaatcactatctacggcagctatagccttaagaaatgtatttc s panTro5.chrUn_NW_015974889v1 6929 474 + 17818 cagtcctctcaaaccctgctgctgctttat------------tgtaa-atttcgaatatccttgtgtcattccaag-atgtt-----tgtctctacacggaggtagattccatctcaaaaaac-acctcctttgctcatcatcgt-taggagaaactcctcattcattaaagtttaaccctgagaattgcagcaa-tcag-cacatcgtaggtctcctcttctcatt-cag-tgtctcatcccgtttccaa-gcatctgcagttcctgcctccaattaaagtcttgaacaactcagagtcaacgctgtgaagggttgggattaaatccctgcagactcctggttcatgttgattcattttg-ctcctcccatgagaacaggaaatgttcttaatggca-gtagagtggtgaa-tacttcccagaaaggc--attcca-tcactttgtttcggatccagcagagcaatcactatctacggcagctatagccttaagaaatgtatttc i panTro5.chrUn_NW_015974889v1 I 49 C 0 s gorGor5.CYUI01015914v1 49388 467 - 432965 caatcctctcaaaccctgctgctgcttta-------------tgtaatattctgaataccttgttgtcacttcaagaatgtt-----tgtctctaccagga-gtagattccatctcaaaaaacacctttttttgctcat--tcat-aaggagaaactcctcattcattaaagttttaccctgag-attgcagcaattcacccacatcgtcaggctcttcttctcattccagttgtctca--ccgtttccaacgcatctgcagttcctgcctcc-attaaaggcttgaaccactcagagtca--cctgtg-agggttgggattaaatccctgcagactcct-gttcatgttggt--attttgccttctcccatga-aacagg-aacgttcttaatggcacgtagagtggtgaactactt-ccag-aaggc--attccattcgctttg-ttcggatccagcagagcaatcactatctacggcagctatagccttcagaaatgtatttc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 105887 462 + 85365473 caatcctctcaaaccctgctgctgcttta-------------tgtaatattctgaatcact---tgtcacttcaagaatgtt-----tgtctctacaagga-gtagattccatctcaaaaaacaactttctttactcgt--tcat-aaggagaaactcctcattcattaaagctttaccctgag-attgcagcaattcagccacatcttcagtctcctcttctcattccagttctctca--ccgtttccaccgcatctgcagttccttcctcc-attaaagtcttg-accacccaaagtca--cctgtg--aggttgggattaaatccctccagactcct-gttcatgttgat--agtttgcctcctcccatga-aacagg-aatgttcttaatggcatctagagttgtgaattactt-ccag-aaggc--attccatttgctttg-tccagatccatcagagccatcactatctacggcagctatagccttaagaaatgtatttt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33955083 462 + 185818997 caatcctctgaaaccctgctactgcttta-------------cgcaatgttctgaatcacttcttgtcgcttcaagaatgtt-----tatctctaccagga-gtagattccatcg-aaaaaacaactttctttgcttat--tcat-aaggagaaactc----ttcatgaaagttttatcctgag-attgcagcaattctgccacatcttcaggctcctcttctctttctagttctctca--ctgttcccaccgcatctgcagctccttcctcc-atgaaagtcttgaaccactcaaagtca--cctgtg-agggttgggattaaatccctccagactcct-gttcatgttgat--attttgccttctcccatga-aacagg-aatgttcttaatggcatctagagtggtgaattcctt-ccag-gaggc--attccattcgctttg-tccagatccatcacagcaatcactatctgtggcagctgtagccttaagaaatgtgtttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33571423 462 + 192294377 caatcctctgaaaccctgctactgcttta-------------cgcaatgttctgaatcacttcttgtcgcttcaagaatgtt-----tatctctaccagga-gtagattccatcg-aaaaaacaactttctttgctcat--tcat-aaggagaaactc----ttcatgaaagttttatcctgag-attgcagcaattctgccacatcttcaggctcctcttctctttctagttctctca--ccgttcccaccacatctgcagctccttcctcc-atgaaagtcttgaaccactcaaagtca--cctgtg-agggttgggattaaatccctccagactcct-gttcatgttgat--attttgccttctcccatga-aacagg-aatgttcttaatggcatctagagtggtgaattcctt-ccag-gaggc--attccattcgctttg-tccagatccatcacagcaatcactatctgtggcagctgtagccttaagaaatgtgtttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4332372 462 - 9440265 caatcctctgaaaccctgctactgcttta-------------cgcaatgttctgaatcacttcttgtcgcttcaagaatgtt-----tatctctaccagga-gtagattccatcg-aaaaaacaactttctttgctcat--tcat-aaggagaaactc----ttcatgaaagttttatcctgag-attgcagcaattctgccacatcttcaggctcctcttctctttctagttctctca--ctgttcccaccgcatctgcagctccttcctcc-atgaaagtcttgaaccactcaaagtca--cctgtg-agggttgggattaaatccctccagactcct-gttcatgttgat--attttgccttctcccatga-aacagg-aatgttcttaatggcatctagagtggtgaattcctt-ccag-gaggc--attccattcgctttg-tccagatccatcacagcaatcactatctatggcagctgtagccttaagaaatgtgtttc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16923262 462 - 21915920 caatcctctgaaaccctgctactgcttta-------------cgcaatgttctgaatcacttcttgttgcttcaagaatgtt-----tatctctaccagga-gtagattccatcg-aaaaaacaactttctttgctcat--tcat-aaggagaaactc----ttcatgaaagttttatcctgag-attgcagcaattctgccacatcttcaggctcctcttctctttctagttctctca--ccgttcccaccgcatctgcagctccttcctcc-atgaaagtcctgaaccactcaaagtca--cctgtg-agggctgggattaaatccctccagactcct-gttcatgttgat--attttgcctcctcccatga-aacagg-aatgttcttaatggcatctagagtggtgaattcctt-ccag-gaggc--attccattcgctttg-tccagatccatcacagcaatcactatctatggcagctgtagccttaagaaatgtgtttc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 62559 466 - 21531802 caatcctctgaaaccctgctactgcttta-------------cgcaatgttctgaatcacttcgtgtcgctttaagaatgtt-----tatctctaccagaa-gtagattccattg-aaaaaacaactttctttgctcat--tcat-aaggagaaactcttcattcatgaaagttttatcctgag-attgcagcaattccaccacatcttcaggctcctcttctctttctagttctctca--ccgttcccaccacatctgcagctccttcctcc-atgaaagtcttgaaccactcaaagtca--cctgtg-agggttgggattaaatccctccagactcct-gttcatgttgat--attttgcctcctcccatga-aacagg-aatgttcttaatggcatctagagtggtgaattcctt-ccag-aaggc--attccattcgctttg-tccagatccatcacagcaatcactatctatggcagctgtagccttaagaaatgtgtttc i chlSab2.chr28 C 0 I 3455 s manLeu1.NW_012101810v1 86746 462 - 2515279 caatcctctgaaaccctgctactgcttta-------------cgcaatgttctgaatcacttcttgtcacttcaagaatgtt-----tatctctaccagga-gtagattccatcg-aaaaaacaactttctttgctcat--tcat-aaggagaaactc----ttcatgaaagttttatcctgag-attgcagcaattctgccacatcttcaggctcctcttctctttctagttctctca--ccgttcccaccgcatctgcagctccttcctcc-atgaaagtcttgaaccactcaaagtca--cctgtg-agggctgggattaaatccctccagactcct-gttcatgttgat--attttgcctcctcccatga-aacaga-aatgttcttaatggcatctagagtggtgaattcctt-ccag-aaggc--attccattcgctttg-tccagatccatcacagcaatcactatctatggcagctgtagccttaagaaatgtgtttc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 243375 467 + 6586416 caatcctccgaaaccctgctactgcttta-------------cgcagtgttctgaatcacttcttgtcgcttcaagaatgtt-----tatctcaaccgggg-gtagattccatcg-aaaaagcaactttctttactcat--tcat-aaggagaaactcttcattcatgaaagttttatcctggg-attgcaacaattccgccacatcgtcaggctcctcttctctttctagttctctca--ccgttcccactgcctctgcagctccttcctcc-atgaaagtcttgaaccactcaaagtca--cctgtg-agggtggggattaaatccctccagactcct-gttcatgttgac--attttgcctcctcccatga-aacagg-aatgttcttaatggcatctagagtggtgaattcctt-ccag-aaggcatattccattcgctttg-tccagatccctcacagcaatcactatctat-gcagctgtagccttaagaaatatgtttc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146610196 479 - 204313951 caatcctctcaaaccctgctgctgctttatcaactaaatttatgtaatattctgaatcacttgttgtcacttcaagaatgtttatagtatctctaccagga-atagattccatctcaataaacagctttcttg-----t--ttattgaggaaaaactccttactcattaaagtttgatcatgag-agtacagtaattcaaccacattttcaggctcctcttctaattctcattctctca--ccatttccaccacatctgcagttccttcctcc-atttaagtcctgaaccactccaagtca--cccatg-agggttggaattaaattcctccaaattctg-gttcatgttgat--attttgccttcttccatga-aacagg-aatgtttttaatggcatttagggtggtgaattactt-ctag-aaggc--attccattcgctttg-ttcagatccatcagagcaatcgctatct--gacagctgtagccttaagaaatttatttc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 319561 467 - 2409723 caatattcttaaatcctgctgctgctttatcaactcaatttatgtaatattctgattcac---ttgtcacttcaagaatgtttatagtatctctaccagga-atagattccatctcgataaacagcttcctcggctcat--tcat--aggagaaactcctcattcgttaacgtttgatctt--g-agttcagcaattcagccacgtcttcaggctcctcttc---ttctagttccctcg--ccgttt---ccacatttgcagctccttcctgc-atttaagtcttgaaccgctccaagtca--cccatg-atggttggaattaaattcttccaaactccg-gttcatgttaat--attttgcctacttccatga-aacggg-aatgtttttaatggcatttagggtcgtcaattactt-ccag-aaggc--attccattcgctttg-tccaaatccatcagagcaatca----ct--gacagctgtagccgtaagaaatgtatttc i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I a score=12012.000000 s hg38.chr7_KI270899v1_alt 88539 2 + 190869 tt s panTro5.chrUn_NW_015974889v1 7403 2 + 17818 tt i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 49855 2 - 432965 tt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 106349 2 + 85365473 tt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33955545 2 + 185818997 tt i rheMac8.chr3 C 0 I 3464 s macFas5.chr3 33571885 2 + 192294377 tt i macFas5.chr3 C 0 I 3462 s macNem1.NW_012019910v1 4332834 2 - 9440265 tt i macNem1.NW_012019910v1 C 0 I 4010 s cerAty1.NW_012002954v1 16923724 2 - 21915920 tt i cerAty1.NW_012002954v1 C 0 I 3911 s manLeu1.NW_012101810v1 87208 2 - 2515279 tt i manLeu1.NW_012101810v1 C 0 I 3455 s colAng1.NW_012117710v1 243842 2 + 6586416 tt i colAng1.NW_012117710v1 C 0 I 3753 s calJac3.chr2 146610675 2 - 204313951 tt i calJac3.chr2 C 0 I 13397 s saiBol1.JH378296 320028 2 - 2409723 tt i saiBol1.JH378296 C 0 I 3093 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I a score=52659.000000 s hg38.chr7_KI270899v1_alt 88541 137 + 190869 tc---tttttttttgagacggagt-cttgctctgtcacccaggctggagt---gcagtggagc-aatct--ccactcactgcaagctctgcctcctgggttca-cgccattctc-ctgcctcagcctcccgagtagctgggact-acagg s panTro5.chrUn_NW_015974889v1 7405 144 + 17818 tc---ttttttttggagacggagtgcttgctctgccgccca-gctggagtgcagcagtggagcgaatctgctcactcactgcaagctctggcctcccggttcaccgccattctcgctgcctcg--ctcccgagtagctgggactgacagg i panTro5.chrUn_NW_015974889v1 C 0 I 37 s gorGor5.CYUI01015914v1 49857 138 - 432965 tc--ttttttttttgagacggagt-cttgctctgtcacccaggctggagt---gcagtggtgc-gatct--cagctcactgcaagctccacctcccgggttca-cgccattctc-ctgcctcagcctcccgactagctgggact-acagg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 106351 140 + 85365473 ttttttttttttttgaaacggagt-ctcgctctgtcacccaggctggagt---gcagtggcac-aatct--cagctcactgcaagctccgcctcccaggttca-caccattctc-ctgcctcagtctcccgagtagctgggact-acagg i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I a score=6918.000000 s hg38.chr7_KI270899v1_alt 88678 29 + 190869 cgcccgccatcacgcccggctaatatttt s gorGor5.CYUI01015914v1 49995 29 - 432965 cacccgccaccacgcccagctaatttttt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 106491 29 + 85365473 cgcccgccaccatgcccagctaatttttt i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I e panTro5.chrUn_NW_015974889v1 7549 37 + 17818 I a score=198702.000000 s hg38.chr7_KI270899v1_alt 88707 486 + 190869 gtatttttagtagagacggggtttcac-cgtgtgagccaggatggtctcgatctcctgacctc---gtgatc--cacccgc-ctcggcctc-ccaaagtgct-gggattacaggcgtgagccactg-tgcccagccagaaatgtacttcttaaat-aataagatg--aaagtcaaaatt-actccttgatct-atgggc-tgcaaatggatattgtgttagcaggc-atgaaaaca-atattaattt--agt-acatcttcatcagagctcttgggtgac-cagctgcatt-ataaataaccagtaatatttt--gaaagacatttttttcctgtgca-tagttc-tcaacagggggcttaaaatattcagtaaaccgtgcta-------taacaaatgtgctgtcatcaaagctttatgtgccatttatagagtgcaaacagagta-gatgcg-gcataattcttaagggccttagaatgttc-aatatggtaaataagcattggc-ttcgacttaaaatcac s panTro5.chrUn_NW_015974889v1 7586 520 + 17818 ttatattaagtagagatgggttttcacgcgtgtgagccaggatggtctcgatctcctgaccataaagtgatccgcacccgcgctcggcatcaccaaagtgctggggattacaggcgtgag-cactgatgcccagccagaaatgtacttcttaaataaataaaacgatatagtaaaaattaactccttgatctgatggtcatgcaaataagtgt--ggttagcaggcaatgaaaatagatattaattttaggtaacatcttca-cagagactttgggtgacgcagctgcattaataaataaccagtatcattttgagaaagacattttttcctgttgcattagttcttcaacagggggcttaaaatatgcagtaaaccgtgctcattaaattaacaaatgtgctgtcatcaaagctttatgtgccatttatagagtgcaaacagagtaggatgtgtccataattcttacagggcctagaatgttcaaatatggtaaatagataagcgctttcgacttaaaatcac i panTro5.chrUn_NW_015974889v1 I 37 I 31 s gorGor5.CYUI01015914v1 50024 487 - 432965 gtatttttagtagagtcagggtttcac-cgtgttagccaggatggtctcgatctcctgacctc---gtgatc--cgcccgc-ctcggcctc-ccaaagtgct-gggattacaggcgtgagccaccg-tgcccagccagaaacgtacttcttaaat-aataaaactg-aaagtcaaaatt-actccttgatct-gtgggc-tgcaaatggatattgtgttagcaggc-atgaaaaca-atattaattt--agt-gcatcttcatcagagctcttgggtgac-cagctgcatt-ataaataaccggtaatatttt--gaaagacatttttttcctgtgca-tagttc-tcaacagggggcttaaaatattcagtaaaccatgcta-------taacaaatgtgctgtcatcaaagctttatgtgccatttatagagtgcaaacagagta-gatgtg-gcataattcttaagggccttagaatgttc-aatatggtaaataagcattggc-ttcgacttaaaatcac i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 106520 486 + 85365473 gtatttttagtagagacggggtttcac-tgtgttagccaggatggtctcgatctcctgacctc---gtgatc--tgcccac-ctcggcctc-ccaaagtgct-gggattacaggtgtgagccaccg-cgcctgcccagaagtatacttcttaaat-aataaaactg-aaagtcaaaatt-actccttgatct-atgggc-tgcaaatggatattgtgttagcaggc-atgaaaaca-atattaattt--agt-acatctccatcagagctcttgggtgac-cagctgcatt-ataaatgaccagtaatatttt--gaaagacatttttttcctgtgca-taggtc-tcaacagggggcttaaaatattcagtaaaccgtgcta-------taacaaatgtgctgtcatcaaagctttatgtgccatttatagagtgcaagcagagca-gatctg-gca-aattcttaagggccttagaatgttc-aatatggtgaataagcattggc-ttcgacttaaaatcgc i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I a score=6982.000000 s hg38.chr7_KI270899v1_alt 89193 28 + 190869 caactgcgttagtaattaacaagacagt s gorGor5.CYUI01015914v1 50511 28 - 432965 caactgcattagtaattaacaagacagt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 107006 27 + 85365473 -cactgcgttagtaattaacaagacagt i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I e panTro5.chrUn_NW_015974889v1 8106 31 + 17818 I a score=577655.000000 s hg38.chr7_KI270899v1_alt 89221 1400 + 190869 cagtc-tgtcctttgcagaattgatgccaggtat-taacgtctc---ctc-ttcagctctaaaagttc-gagatggcatcttatttcaatagaatg-ctgtttcatcta-cattgcaaatctgttgtttagtgtagcc-gccttcatcaagcagctcagcta-gatcttccggagaac--ttgctg-aagcctctacattagcatttg-ctgcttc-accttgtgcttttatgttatggaaatggcttcttttc-ttaagcatcatgaac-agctaacttcaaacttttctcct-gtggtttc---ctta-cctctct-cagccttcacagaat-tgaag-agcgttaagac--cttgc----tctggattgggctttggcttaa-tggaatattgtggttgattagatcttctacacagaccactacaactatcttcgtatcagc-aacaaggctgttttactttcttatttatg-tgtccactagaagagca--cttttaattttcttaaata-acttttcctttgcatttataacatggctaactacttgga-gcaagaggcctagctttcagcctatcttggttattgacaca--ccttcctcactaagctcactaacgtca-cttcc-agcttttgacctaaagtgagagatgtgtgactcttgctttcacttgaacacttaggtcattgtag--ggctattaacctaatttcaatattattgtgtctcaggtaataggga-ggctcaaggagagggagaa--aggtgaaggaatggccagctggtgga-gcagtc-agaacatacataacatttat-cgattcag-ttcacca-tctg--atatggtatgggcaaggcg--catggcactccaaaacaattgtaatagtaacattaaagatcaccaatcacaggtcactataacatatataacaataaa-gaaaatta-------------------------aaattattattataaattgtactaaaatgtgacaca-gagacaagaagtgagc-ac-atgctgttggaaaaatggcactg-gtggacttg-ctgga-tgcag-agttg-ccgcagactttccatttgcaaaacaaaaacacaatgtcagttgt-gcacgg-tggctcatgcctgtaatccca-gcactttgggaggccgaggcaggcagattgtgtgagtccgggagtttgagaccggcctgggcaaca--tggcaaaacactgtctctac-aaaaaataaaaaaaaatcagccaagcgtggtggtgcacac--ctgcagtcccagct-ac-ttgggaggctgaggtg--ggaggatt--tcc--ggagc---ctggtaggtggaggttacagtgagccaagatcat--gc--cac--tgcacgccagcctgggagacagagc-aagacctcatctcaa-------------aaaaacaaacaaacaaaaaaacccacaatgtctgtgaagtgcaat-aaagc-aaagcacaataataaaagatatgcctgTG s panTro5.chrUn_NW_015974889v1 8137 1457 + 17818 cagtcatgtcctttgcagaattgatgcca-gtatgtaacgtcttgcgctctttcagctctaaaagtcgagagatggcatctatttccaatagaatgcctgtttcatctaccattgcaaatctgttgttt-gtgtagccggccttcatcaagca-ctcagctatgatcttc--gagaatcactgctgaaagcctctacattag-atttgcctgcttcaaccttgtgcttttatgttatggaaatggcttcttttcattaagcatcatgaacaagctaacttcaaac-tttctcctggtggtttcgcatttagcctctctacagccttcacagaatatgaagaagcgttaagaccgcttgc----tctggattggctcttggcttaagtggaatattgtgg-tgattagatcttctacacagaccagca-aactatctctgtatcagcgaacaaggctgttttactttcttatttatgttgtccactagaagagcattctttttaatttcttaaatagacttttcttgtgcatttataacatggct-actacttggaggcaagaaagctagctttca-cctatcttggttattgacacaacccttcctaactaagctcactaaggtcatcttcctagcttttgacataaggtgaga-atgtgtgact-ttgctttcacttgaacacttaggtcattgtaggaggctattaacctaatttcaatataatt-tgtctcaggtgatagggagggctcaagaagagggaggaacaggtgaa-gaatggc--actggtggaggcagtcaagaaattacataactattatccgattcagtttcaccactctgaaatatggtatgggcaaggcggctatggcactccaaaacaattgtaatagtaacattaaagatcaccaatcacaggtcactataacatatataacaataaatgaaaatta-------------------------aaat--ttattattaattgtac-aacatg-gactcatgagataa-aagtgagcgacaatgctgtt-gaaaaatggcactgtgtggacttgtctggagtgcagaagttgcccacagac-ttccatctgcaaaac-aaaacacaa-GTCAGTTGTggcacggttgggtcatgcctgtaatcccaggcactttggga-gccgaggca-gcagatt-tgggagtccaggagtttgagacc-gcctgggcaacaatcggcaaaacactgtctcttcaaaaaaataaaattaaatcagccaagcgt-gtggtgcacacaactgcagtcccagctgacattgggaggtcgaggtggtggaggattaatcctatgagcttactggtaggtggaggttacagtgagccaagatcataagctgcactttgctaaccagcctggg-gacagagcaaagaacccgtcatca-------------aaaaac-aacaaacaaaaaCCGCCACAATGTCTGTGAAGTGCAATAAAAGCAAAAGCAAAATAATAAAAGATATGGCTGTG i panTro5.chrUn_NW_015974889v1 I 31 I 21 s gorGor5.CYUI01015914v1 50539 1400 - 432965 cagtc-tgtcctttgcagaatcgatgccaggtat-taacgtctc---ctc-ttcagctctaaaagttc-gagatggcatcttatttccatagaaag-ctgtttcatcta-cattgcaaatctgttgtttagtgtagcc-gccttcatcaagcagctcagcta-gatcttccggagaac--ttgctg-aagcctctacattagcatttg-ctgcttc-accttgtgcttttatgttatggaaatggcttcttttc-ttaagcatcatgaac-agctaacttcaaacttttctcct-gtggtttc---ctta-cttctct-cagccttcacagaat-tgaag-agcgttaagac--cttgc----tctggattgggctttggcttaa-tggaatattgtggttgattagatcttctacacagaccactaaaactatcttcatatcagc-aacaaggctgttttactttcttatttatg-tgtccactagaagagca--cttttaattttcttaaata-acttttcctttgcatttataacatggctaactacttgga-gcaagagacctagctttcagcctatcttggttattgacaca--ccttcctcactaagctcactaaggtca-cttcc-agcttttgacctaaagtgagagatgtgtgactcttgctttcacttgaacacttaggtcattgtag--ggctattaacctaatttcaatattattgtgtctcaggtaataggga-ggctcaaggagagggagaa--aggtgaaggaatggccagctggtgga-gcagtc-agaacatacataacatttat-cgattcag-ttcacca-tctg--atatggtatgggcaaggtg--catggcactccaaaacaattgtaatagtaacattaaagatcaccaatcacaggtcactataacatatataacaataat-gaaaatta-------------------------aaattattattataaattgtactaaaatgtgacaca-gagacaagaagtgagc-ac-atgctgttggaaaaatggcactg-gtggacttg-ctgga-agcac-agttg-ccacagactttccatttgcaaaacaaaaacacaatgtcagttgt-gcacgg-tggctcatgcctgtaatccca-gcactttgggaggccgaggcaggcagaatgtgtgagttcaggagtttgagaccggcctgggcaaca--tggcaaaacactgtctctac-aaaagataaaaaaaaatcagccaagcatggtggtgcacac--ctgcagtcccagct-ac-ttgggaggctgaggtg--ggaggatt--tcc--tgagc---ctggtaggtggaggttacagtgagccaagatcat--gc--cac--tgcatgccagcctgggagacagagc-aagacctcatctcaa-------------aaaaacaagcaaacaaaaaaacccacaatgtctgtgaagtgcaat-aaagc-aaagcacaataataaaagatatgcctgTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 107033 1434 + 85365473 cagtc-tgtcctttgaagaattgatgccaggtat-taacatctc---ctc-tttagctctaaaagtcc-gacatggcatcttatttcaatagaagg-ctgtttcatcta-cattgcaaatctgttgtttggtgtagct-gccttcatcaagtagctcagcta-gatcttccggagaac--tcgctg-aagcctctgcattagcatttg-ctgcttc-accttgagcttttatgttatggaaatggcttcttttc-ttaagcatcataaac-agctaacttcaaacttttctcct-gtggtttc---ctca-cctctct-cagccttcacagaat-tgaag-agagttaagac--cttgctctgtctggattgggctttggcttaa-tggaacattgtggttgattagatcttctacacagaccactaaaactatcttcatatcagc-aacaaggctgttttactttcttatttatg-tgtccactagaagagca--cttttaattttcttaaata-acttttcctttgcatttataacatggctaactacttggt-gcaagaggcctagctttcagcctctcttggttattgacaca--ccttcctcactaagctcactaagatca-cttcc-agcttttgaccgaaa--gagagatgcgtgactcttgctttcacttgaacacttaggtcattgtag--ggctattaacctaacttcaatatcattgtgtctcaggtaataggga-ggctcaaggagagggagaa--aggtgaaggaacggccagctggtgga-gcagtc-agaacatacataacatttat-cagttcag-ttcaccg-tctt--atatggtatgggcaaggtg--cgtggcactccaaaacaactgtaatagtaacgttaaagatcaccaatcacaggtcactataacatatataacaataat-gaaaattattttcattattgttatatatgtaccaaattattgttataaa-tgtaccaaaatgtgacaca-gagacaagaagtgagc-at-gtgctgttggaaaaatggcactg-gtggacttg-ctgga-tgcag-agttg-ccacaaactttccatttgcaaaacaaaaacacaatgtcagttgt-gcacgg-tggctca----tgtaatccca-gcactttgggaggctgaggcaggcagattgtgtgagtccaggagtttgagaccagcctgggcaaca--tggcaaaacactgtctctac-aaaaaataaaa-aaaattagccaagcatggtggtgcacac--ctgcagtcccagct-ac-ttgggaggctgaagtg--ggaggatt--gcc--tgagc---ctggtaggtgtaggttacagtgagccgagatcat--ga--cac--tgcacaccagcctgggagacagagc-aagacctcatctcaaaaaaaacaaaaacaaaaacaaaacaaaacaaaaacccacaatgtctgtgaagtgcaat-aaagc-aaagcacaataataaaagatatgcctttg i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I a score=3778.000000 s hg38.chr7_KI270899v1_alt 90621 15 + 190869 Cacacattatgggag s gorGor5.CYUI01015914v1 51939 15 - 432965 Cacacattatgggag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 108467 15 + 85365473 cacatactatgggag i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I e panTro5.chrUn_NW_015974889v1 9594 21 + 17818 I a score=106206.000000 s hg38.chr7_KI270899v1_alt 90636 253 + 190869 ttccagaatagagagagaaagaggtgaaggc-ctatt-tgaagaaa-tcatggctgaaaacttcccaaatttgagc-aaaagaatggacataagagttca-agaaattcaactaga-ataaatccaaagagacccattatcatcaaa--ctgtcag-aagtcaaagacaaaataagaatcttgaaaacagcaa-gagaaaagc-aactcatcagtgcaagggagctcc-cataagattata-agtgggtttctgagcagaaacttt s panTro5.chrUn_NW_015974889v1 9615 260 + 17818 ttccagaatagagagagaaagaggtgaaggcgctattatgaagaaattcattgctgaaaaacttcccaatttgagcaaaaagaatggaca-ataagctcatagaaattcaactagatataaatccaaagagacgcattatcatcaacttctgtcagtaagtcaaag-caaaataagaatcttgaaacaggcaaggagaaaagcaaactcatca-tacaa-ggagctccgcataagattatatagtgtgtttctgagca-aaac-tt i panTro5.chrUn_NW_015974889v1 I 21 C 0 s gorGor5.CYUI01015914v1 51954 253 - 432965 ttccagaatagagagagaaagaggtgaaggc-ctatt-tgaagaaa-tcatggctgaaaacttcccaaatttgagc-aaaagaatggacataagagttca-agaaattcaacgaga-ataaatccaaagagacccattatcatcaaa--ctgtcag-aagtcaaggacaaaataagaatcttgaaaacagcaa-gagaaaagc-aactcatcagtacaagggagctcc-cataagattata-agtgggtttctgagcagaaacttt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 108482 253 + 85365473 ttccagaatagagagagaaagaggtgaaggc-ctatt-tgaagaaa-tcatggctgaaaacttcccaaacttgagc-aaaagaatggacgtaagagttca-agaaattcaactaga-aaaaatccaaagaggcccattatcatcaaa--ctgtcag-aagtcaagggcaaaatgagaatcttgaaaacagcaa-gagaaaagc-aactcatcagtacaagggagttcc-cataagattata-agtgggtttctgagcagaaacttt i nomLeu3.chr20 C 0 M 806 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I a score=158424.000000 s hg38.chr7_KI270899v1_alt 90889 788 + 190869 gta-ggccagaagggagtagaatga-tatattcaaagtgctatcagagt--aaaaacagtcagccaagaacactatatccagc--aaaattatccttcaaaaatcatcccaaataaacaaaagctgagagaattcaacacc--acgagatatttc-ctacaaga--aatgctaaaaggagttcttcgagttgaa-ataaaaggaca--ctagacagcaatcccaaactac--atgaaaatatgaaactctc----tagaaaaggtaaatatataga-caaatgtagaatcctgtact-atca---taatgt---tagtatataaatcactttta--attcttgtatagaatttaaaagatg-aaaacatttaaaaataat-catagaactctgttaatggttacacaatataaaagagataatt--tgcgacgtcaatagccaa-gtgtaggggagtgaaggtgtaaaagagtacagtttttg-agtgcaattgaggttaaactgctatcagtttaaaatggatc-attataactttaagatattttatgtaatcccaaggtgaatataaagaaaatatttatagaagacatacaaaaggaaataagaa-atcaaagca-tgtcactataa-tttttttttttttttgagacagagtct-tgctc-tgtcacccaggctggagc-gcagtggtgcaatctcggctcactgcaacctctgcttcccaggttcaagtgattctc-ctgcctcagcctcctgagtagctgggattaca-ggtgtg-caccaccatgcccggctaatttttg-tatttttagtagagatgggttttcac s panTro5.chrUn_NW_015974889v1 9875 812 + 17818 gtagggccagaagggagtagaatgattatattcaaagtgcta--aga-t--aaaaactgtcagcc-agaacactatatccagcaaaaaattatccttcaaaaatcatcgcaaataacaaaaggctga-agaattcaacacccggcgagataattctctacaagagtaatgct-aaaggagtt-tttgagttgaagataaaaggacatcttagacagcaatcccaaac-actaatgaaaa-ataaaactctcgtaagaaaaaaggtaaatatatagagcaaatgtagaatcctgtactaatcaatgaaatgtttataatatataaatcacttttaacatgcttg-atagaatttaaaagatgaaaaacattttaaaataatccatagaa-tctgtc-atgg-tacaaaatataaaagagataactactgcgacatcaataggcaaggtgta-gggaatgaagatgtaaaagagtacagtttttgcagtgcaattgaggttaaac-gctatcagttt-aaatggatcaattacaaatttaagat-ttttatgtaatcctatggtgaata-aaagaaaatatttatagaagacatacaaaaggaaataagaatatcaaagcattatcactataa-tttttttttttttttgagacagagtctgcgctcttctcacccaggctggagcaagagtggtgcaatctcggctcactgcaacctctgcttcccaggttcaagtgattctctctacctcagcctcctgagtagctgggattacgtggtgtgccgccagcatgcctg--caatttttgatatttttagtagagatgggttttcac i panTro5.chrUn_NW_015974889v1 C 0 I 686 s gorGor5.CYUI01015914v1 52207 791 - 432965 ata-ggccagaagggagtagaatga-tatattcaaagtgctaccagagtaaaaaaactgtcagccaagaacactatatccagc--aaaattatccttcaaaaatcatcccaaataaacaaaagctgagaaaattcaacacc--acgagatatttc-ctacaaga--aatgctaaaaagagttctttgagttgaa-ataaaaggaca--ctagacagcaatcccaaactac--atgaaaatataaaactctc----tagaaaaggtaaatatataga-caaatgtagaatcctgtact-atta---taatat---tagtatataaatctctttta--attcttgtatagaatttaaaagatg-aaaacattttaaaataat-catagaactctgtcaatggttacacaatataaaagagataatc--tgcgacatcaatagccaa-gtgtaggggagagaagatgtaaaagagtaaagtttttg-agtgcaattgaggttaaactgctatcagtttaaaatggatc-attataactttaagatattttatgtaatcccatggtgaatataaagaaaatatttatagaagacatacaaaaggaaataagaa-attaaagca-tgtcactataattttttttttttttttgcgacagagtct-tgctc-tgtcacccaggctggagc-gtagtggtgcaatctcggctcactgcaacctctgcttcccaggttcaagtgattctc-ctgcctcagcctcctgagtagctgggattaca-ggtgtg-caccagcatgcctggctaatttttg-tatttttagtagagatgggttttcac i gorGor5.CYUI01015914v1 C 0 C 0 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I e nomLeu3.chr20 108735 806 + 85365473 M a score=4779.000000 s hg38.chr7_KI270899v1_alt 91677 52 + 190869 catgttggtcaggctggtctcaaactcctgacctcgtgatctgcctgcctca s gorGor5.CYUI01015914v1 52998 52 - 432965 catgttggtcaggctgttctcaaactcctgacctcgtgatctgcctgcctca i gorGor5.CYUI01015914v1 C 0 C 0 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I e nomLeu3.chr20 108735 806 + 85365473 M e panTro5.chrUn_NW_015974889v1 10687 686 + 17818 I a score=65675.000000 s hg38.chr7_KI270899v1_alt 91729 272 + 190869 gcctcccaaagtgctgggattacaggtgtgagccaccacacctggcctataaaaaattttgaaagtacaaaggaaaggagtaaggaggaaaaatggagacaaaatagccataaaacatacagtaaacaattaacaaattggcagtagtaagtcttccttaccagtaatttcttcaaatgtaaattaattaaactccctaatcaaaagac--agattgagttgattaaaaatgaaaagaaaaaaaaaaagaagatccaactatatgctgtctaca s gorGor5.CYUI01015914v1 53050 270 - 432965 gcctcccaaagtgctgggattacaggtgtgagccaccacacctggcctataaaaaattttgaaagtacaaaggaaaggagtaaggaggaaaaagggagacaaaatagctgtaaaacatacagaaaacaattaacaaattggcagtagtaagtcttccttaccagtaatttctttaaatgtaaattaattaaactccctaatcaaaagac--agattgagttgattaaaaatgaaaag--aaaaaaaaacaagatccaactatatgctgtctaca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 109543 266 + 85365473 gcctcccagagtgttgtgattacaggtgtgagccactgcacctggcctataaaaaattttaaaagtacaaaggaaaggagtaagaaggaaaaa-ggagacaaaatagcgataaaacatacagaaaacaattaacaaattggccatagtaagtcttccttaccagtaatttctttaaatgtaaatgaattaaacttcctaatcaaaagacatagattgaattgattaaaaataaaaag-------aaaacaagatccaactatatgctgtctaca i nomLeu3.chr20 M 806 C 0 e colAng1.NW_012117710v1 243844 3753 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e chlSab2.chr28 63025 3455 - 21531802 I e manLeu1.NW_012101810v1 87210 3455 - 2515279 I e cerAty1.NW_012002954v1 16923726 3911 - 21915920 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e macFas5.chr3 33571887 3462 + 192294377 I e rheMac8.chr3 33955547 3464 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 320030 3093 - 2409723 I e cebCap1.NW_016107703v1 454117 4298 - 2125214 I e calJac3.chr2 146610677 13397 - 204313951 I e panTro5.chrUn_NW_015974889v1 10687 686 + 17818 I a score=824178.000000 s hg38.chr7_KI270899v1_alt 92001 197 + 190869 agaaataaacaggaacacaacaatggtaagagacctcaatactcgcctttcaacaatggatagaagaaacagatagaagaccagtaaggaagcaaaggacttgaacagcactatagaccaattggacctaacggacgtatatagaacactctacacaacaacagcagaatatataatacattcttcccaagggcacg s gorGor5.CYUI01015914v1 53320 197 - 432965 agaaataaacaggaacacaacaatggtaagagacctcaatactcgcctttcaacaatggatagaagaaacagatagaagaccagtaaggaaacaaaggacttgaacagcactatagaccaattggacctaacggacgtatatagaacactctacacaacaacagcagaatatataatacattcttcccaagggcacg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 109809 197 + 85365473 ataaataaacaggaacacaacaatggtaggagacctcaatactctccttccaacaatggatagaagaaccagatagaagatcagtaaggaaacaaaggactcaaacagcactatagaccaactggacctaacagacgtatatcgaacactccacccaacagcagcagaatatataatacattcttcccaagggcaca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33959011 197 + 185818997 agaaataaacaggaacacagtaatggtcagagacctcaatactctcctttcaacaatggatagaagaaccgggcagaagatcagtagagaaacaaaggacttgaacagcactgtagatcaatcggatctaacagacgcatgtagaacactctactcagcaagagcagaatatataatacgtccttcccaagggcacg i rheMac8.chr3 I 3464 C 0 s macFas5.chr3 33575349 197 + 192294377 agaaataaacaggaacacagtaatggtcagagacctcaatactctcctttcaacaatggatagaagaaccgggcagaagatcagtagggaaacaaaggacttgaacagcactgtagatcaatcggatctaacagacgcatgtagaacactctactcagcaagagcagaatatataatacgtccttcccaagggcacg i macFas5.chr3 I 3462 C 0 s cerAty1.NW_012002954v1 16927637 197 - 21915920 agaaataaacaggaacacagtaatggtcagagacctcaatactcttctttcaacaatggatagaagaactgggcagaagatcagtagggaaacaaaggacttgaacagcactgtagatcaatcggatctaacagacgcatgtagaacactctactcagcaagagcggaatatataatacgtccttcccaagggcacg i cerAty1.NW_012002954v1 I 3911 C 0 s chlSab2.chr28 66480 196 - 21531802 agaaataaa-aggaacacagtaatggtcagagacctcaatactctcctttcaacaacggatagaagaaccggacagaaaatcagcagggaaacaaaggacctgaacagcactgtagatcaaccgaacctcacagatgcgtgtagaacactctacgcagcaagagcggaatatgtaatacgtccttcgcaagggcacg i chlSab2.chr28 I 3455 C 0 s manLeu1.NW_012101810v1 90665 197 - 2515279 agaaataaacaggaacacagtaatggtcagagacctcaatactctcctttcaacaatggatagaagaactgggcagaagatcagtagggaaacaaaggacttgaacagcactgtagatcaatcggatctaacagacgcatgtagaacactctactcagcaagagcggaatacataatacgtccttcccaagggcacg i manLeu1.NW_012101810v1 I 3455 C 0 s colAng1.NW_012117710v1 247597 197 + 6586416 agaaataaacaggaacacagtaatggtcagagacctcaatactctcctttcaacaatggatagaagaaccggacagaagatcactagggaaacaaaggacttgaacagcactgtagatcaaccggacctaacagacgcgtgtagaacactctactcagcaagagcagaatttataatatgtccttccccagggcacg i colAng1.NW_012117710v1 I 3753 C 0 s saiBol1.JH378296 323123 195 - 2409723 agaaataaagaggaacacgacagtggtaaaagacctccatactctactttcaacaatggatataagaaccagacagaatatcagtaaggaaacgaaggacttgaacggcactgtagatcaactggagct--cagacatgtatagaatgctctacccaacaacagcagaatatataatacattcttcccaaaggtgca i saiBol1.JH378296 I 3093 C 0 s cebCap1.NW_016107703v1 458415 195 - 2125214 agaaataaagaggaacacaacagtggtaaaagacctcaatactctactttcaacaatggatagaagacccagacagaatatcagtaaggaaacgaaggacttgaacagcactatagatcgattggagct--cacacatgcatagaacactctacccaacaacagcagaatatataatacattcttcccaaaggtgca i cebCap1.NW_016107703v1 I 4298 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e calJac3.chr2 146610677 13397 - 204313951 I e panTro5.chrUn_NW_015974889v1 10687 686 + 17818 I a score=381078.000000 s hg38.chr7_KI270899v1_alt 92198 78 + 190869 tggaatatcttccaagagagaccatatgatcggccacgaaacaagtcttaacaaatgtaag-agtttgaaattatagaa s panTro5.chrUn_NW_015974889v1 11373 78 + 17818 tggaatatcttccaagagagaccatatgatcggccatgaaataagtcttaacaaatgtaag-agtttgaaattatagaa i panTro5.chrUn_NW_015974889v1 I 686 C 0 s gorGor5.CYUI01015914v1 53517 78 - 432965 tggaatatcttccaagagagaccatatgatcggccacgaaacaagtcttaacaaatgtaag-agtttgaaattatagaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 110006 79 + 85365473 tggagtatcttccaagagagaccatatgatcagccacaaaacaagtcttaacaaatgtaagaagtttgaaattatggaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33959208 79 + 185818997 tggaatatcctccaagacagaccataagacaggccacaaaacaagtctcaacaaatgtaagaagtttgaaattatagac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33575546 79 + 192294377 tggaatatcctccaagacagaccataagacaggccacaaaacaagtctcaacaaatgtaagaagtttgaaattatagac i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16927834 79 - 21915920 tggaatatcctccaagacagaccataagacaggccacaaaacaagtctcaacaaatgtaagaagtttgaaattatagac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 66676 79 - 21531802 tggaatatcctccaacacagaccataaggcaggccacaaaacaagtctcaacaaatgtaagaagtttgaaattatagac i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 90862 79 - 2515279 tggaatatcctccaagacagaccataagacaggccacaaaacaagtctcaacaaatgtaagaagtttgaaattatagac i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 247794 79 + 6586416 tggaatatcctccaagacagaccgtaagacaggccacaaaacaagtctcaacaaatgtgagaagtttgaaatgatagac i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 323318 79 - 2409723 tggagtatcttctaagacagaccatatgataggccacgaaacaagttttaacaaatttaagacatttcaggttatagaa i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 458610 79 - 2125214 tggagtatcttccaagacagaccatgtgataggctacaaaacaagttttaacaaatttaatacatttgagtgtatagaa i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e macNem1.NW_012019910v1 4332836 4010 - 9440265 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e calJac3.chr2 146610677 13397 - 204313951 I a score=4361851.000000 s hg38.chr7_KI270899v1_alt 92276 703 + 190869 aatatatgttctgatcacaaaggaatgaaactagaaatcaacagcagaaggaaaacgggaaacttcac-aattagtgaatatttaaaaacagactctt----aagaaaccaaaggatcaaggaagataccacagggaaaaatagagaatatctcaagacaaatgaaaacaaaaacgcaacataccaaaacttataggatgcaatgagagcagtattaagagggaaattcatagaggtgaaaacttacatttaaaaagaagatggatctcaaataaacaacctaactttacatctcaaggaactagaaaaagaagaacaagttaaacatgaattagcagaaagaaggaaatggtaatgattagaacagagataaacacaata----atagaaaac-aatagaaaaatcaacaaactgaagagctggatttttgaaaagatcaacaaaattaacagaaactcttagctagattagctaag--aaaaaaagagggaagactcaattaaatcagaaatgaaagaggccccttacaactgatgccacataaataaaaaatattgtaagagaatgtcatgaacaatggctatataccaacaaattgggtaatctggaagaaattgaaaaattcctagaaatatacaacctaccaagattgaatcatgaacaaataattatctgaaaagacctataactagtaa-aagattgaattagtcatc s panTro5.chrUn_NW_015974889v1 11451 707 + 17818 aatatatgttctgatcacaaagaaatgaaactagaaatcaacagcagaaggaaaactggaaacttcac-aattagtgaatatttaaaaacagaatctt----aagaaaccaaaggatcaaggaagataccacagggaaaaatagagaatatctcaagacaaatgaaaacaaaaacgcaacataccaaaacttataggatgcaatgagagcagtattaagagggaaattcatagcggtgaaaacttacatttaaaaagaagatggatctcaaataaacaacctaactttacatctcaaggaactagaaaaagaagaacaagttaaacacgaattagcagaaagaaggaaatggtaatgattagaacagagataaacacaatagagaatagaaaac-aatagaaaaatcaacaaactgaagagctggatttttgaaaagatcaacaaaattaacagaaactcttagctagattagctaag--aaaaaaagagagaagactcaattaaatcagaaatgaaagaggcccctcacaactgatgccacataaataaaaaatattataagagaatgtcatgaacaacggctatacaccaacaaattgggtaatctggaagaaatggaaaaattcctagaaatatacgacctaccaagattgaatcatgaacaaacaattatctgaaaagacctataactagtaa-gagattgaattagtcatc i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 53595 708 - 432965 aatatatgttctaatcacaaaggaatgaaactagaaatcaacagcagaaggaaaactggaaacttcac-aattagtgaatatttaaaaacagactctt----aagaaaccaaaggatcaaggaagataccacagggaaaaatagagaatatctcaagacaaatgaaaacaaaaacgcaacataccaaaacttataggatgcaatgagagcagtattaagagggaaattcatagcggtgaaaacttacgtttaaaaagaagatagatctcaaataaacaacctaactttacatctcaaggaactggaaaaagaagaacaagttaaacacaaattagcagaaagaaggaaacggtaatgattagaacagagataaacacaatagagaatagaaaac-aatagaaaaatcaacaaactgaagagctggatttttgaaaagatcaacaaaattaacagaaactcttagctagattagctaag-aaaaaaaagagagaagactcaattaaatcagaaatgaaagaggccccttacaactgatgccacataaataaaaaatattataagagaatgtcatgaacaacggctatacagcaacaaattgggtaatctggaagaaatggaaaaattcctagaaatatacgacctaccaagattgaatcatgaacaaataattatctgaaaagacctataactagtaa-gagattgaattagtcatc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 110085 704 + 85365473 aatatatgttctgatcacaaaggaatgaaagtagaaatcaatagcagaaggaaaactggaagcttcac-aattagtgaaaatttaaaaacagactctt----aagaaaccaaaggatcaaggaagataccacagggaaaaatagagaatatcttaagacaaatgaaaacaaaaatgcaacataccaaaacttgcaggatgcaatgagagcagtataaagagggaaatttatagcggtgaaaacttacatttaaaaagaagatggatctcaaataaacaacctaactttatatctcaaggaactaggaaaagaagaacaagttaaacacgaattagcagaaagaaggaaatggtaatgattagaacagagataaacacaatagagaatagaaaac-aatagaaaaatcaacaaactgaagagctggatttttgaaaagatcaacaaaattgacagaaactcttagctagat----taag--aaaaaaagagagaagactcaattaaatcagaaatgaaagaggccccttaccactgatgccacataaataaaaaatattataagagaatatcatgaacaacggctatacaccaatgaattgggtagtctggaagaaatggataaattcctagaaatatacgacctaccaagattgaatcaggaacaaataattatctgaaaagatctataactagcaaggagattgaattagtcatc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33959287 698 + 185818997 aatatatgttctgatcacaaaggaatgaaactagaaatcaatagcagaaggaaaactggaaacttcacaaattagtgaaaatttaaaaacaaactctt----aagaaaccaaaggatcaaggaagatatcacagggaaaaatagagactatcttaagacaaatgaaagcaaaaaggcaacataccaaaacttataggatgcaatgagagcagtatcacgagggaaatttatagcggtgaaaacttacatttaaaaagaagatggatctcaaataaacaacctaacgttatatctcaagaaactagaaaaagaagaacaagttaaacacgaattagcagaaaaaaggaaatggtgatgattagaacagagataaacacaatagagagtagaaaac-aatagaaaaatcgacaaactgaagagttggattcttgaaaag------aaaattgacagaaactcttagtcagat----taag---aaaaaagagagaagcttcaattaaatcagaaatgaaagaggccccttacaactgatgccacataaataaaaaatattataagagaataccatgaatgatggctatacaccaacgaattgggtaatctggaagaaatggataagttcctagaaatatacaacctaccaagattgaatcatgaacaaataattatcagaaaagacctgtaactagtaaggagattgaattagtcatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33575625 698 + 192294377 aatatatgttctgatcacaaaggaatgaaactagaaatcaatagcagaaggaaaactggaaacttcacaaattagtgaaaatttaaaaacaaactctt----aagaaaccaaaggatcaaggaagatatcacagggaaaaatagagactatcttaagacaaatgaaagcaaaaatgcaacataccaaaacttataggatgcaatgagagcagtatcacgagggaaatttatagcggtgaaaacttacatttaaaaagaagatggatctcaaataaacaacctaacgttatatctcaagaaactagaaaaagaagaacaagttaaacacgaattagcagaaaaaaggaaatggtgatgattagaacagagataaacacaatagagagtagaaaac-aatagaaaaatcgacaaactgaagagttggattcttgaaaag------aaaattgacagaaactcttagccagat----taag---aaaaaagagagaagcttcaattaaatcagaaatgaaagaggccccttacaactgatgccacataaataaaaaatattataagagaataccatgaatgatggctatacaccaacgaattgggtaatctggaagaaatggataagttcctagaaatatacaacctacaaagattgaatcatgaacaaataattatcagaaaagacctgtaactagtaaggagattgaattagtcatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4336846 698 - 9440265 aatatatgttctgatcacaaaggaatgaaactagaaatcaatagcagaaggaaaactggaaacttcacaaattagtgaaaatttaaaaacaaactctt----aagaaaccaaaggatcaaggaagatatcacagggaaaaatagagactatcttaagacaaatgaaagcaaaaatgcaacataccaaaacttataggatgcaatgagagcagtatcacgagggaaatttatagcggtgaaaacttatatttaaaaagaagatggatctcaaataaacaacctaacgttatatctcaagaaactagaaaaagaagaacaagttaaacacgaattagcagaaaaaaggaaatggtgatgattagaacagagataaacacaatagagagtagaaaac-aatagaaaaatcgacaaactgaagagttggattcttgaaaag------aaaattgacagaaactcttagccagat----taag---aaaaaagagagaagcttcaattaaatcagaaatgaaagaggccccttacaactgatgccacataaataaaaaatattataagagaataccatgaatgatggctatacaccaacgaattgggtaatctggaagaaatggataagttcctagaaatatacaacctaccaagattgaatcatgaacaaataattatcagaaaagacctgtaactagtaaggagattgaattagtcatc i macNem1.NW_012019910v1 I 4010 C 0 s cerAty1.NW_012002954v1 16927913 698 - 21915920 aatatatgttctgatcacaaaggaatgaaactagaaatcaatagcagaaggaaaaccggaaacttcacaaattagtgaaaatttaaaaacaaactctt----aagaaaccaaaggatcaaggaagatatcacagggaaaaatagagactatcttaagacaaatgaaagcaaaaatgcaacataccaaaacttataggatgcaatgagagcagtatcatgagggaaatttatagcggtgaaaacttacatttaaaaagaagatggatctcaaataaacaacctaacgttatatctcaagaaactagaaaaagaagaacaagttaaacacgaattagcagaaaaaaggaaatggtgatgattagaacagagataaacacaatagagagtagaaaac-aatagaaaaatcgacaaactgaagagttggattcttgaaaag------aaaattgacagaaactcttagccagat----taag---aaaaaagagagaagcttcaattaaatcagaaatgaaagaggccccttacaactgatgccacataaataaaaaatattataagagaataccatgaacaatggctatacaccaacgaactgggtaatctggaagaaatggataagttcctagaaatatacaacctaccaagattgaatcatgaacaaataattatcagaaaagacgtgtaactagtaaggagattgaattagtcatc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 66755 698 - 21531802 aatacatgttctgatcacaaaggaatgaaactaggaatcaacagcagaaggaaaactggaaacttcacaaattagtgataatttaaaaacaaatgctt----aagaaaccaaaggatcaaggaagatatcacagggaaaaatagagtctatcttaagacaaatgaaaacaaaaatgcaacataccaaaacttacaggatgcaatgagagcagtatcacgagggaaatttatagtggtgaaaacctatgtttaaaaagaagatggatctcaaataaacaacctaacgttatatctcaaggaactagaaaaagaagaacaagttaaacatgaattagcagaaagaaggaaatggtgatgattagaacagagataaacacaatagagagtagaaagc-aatagaaaaatcgacaaactgaagagttggatttttgaaaag------aaaattgacacaaactcttagccagat----taag--aaaaaaagagagaagctgcaatt-aatcagaactgaaagaggccccttacaactgatgccacataaataaaaaatattatgagagaatatcatgaacgacggctatacaccaacgaactgggtaatctggaagaaatggataaatctctagaaatatacaacctaccaagattgaatcaggaacaaataattatctgaaaagacctgtaacgagtaaggagattgaattcgtcatc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 90941 698 - 2515279 aatatatgttctgatcacaaaggaatgaaactagaaatcaatagcagaaggaaaaccggaaacttcacaaattagtgaaaatttaaaaacaaactctt----aagaaaccaaaggatcaaggaagatatcacagggaaaaatagagactatcttaagacaaatgaaagcaaaaatgcaacataccaaaacttataggatgcaatgagagcagtatcacgagggaaatttatagcggtgaaaacttacatttaaaaagaagatggatctcaaataaacaacctaacattatatctcaagaaactagaaaaagaagaacaagttaaacacgaattagcagaaaaaaggaaatggtgatgattagaacagagataaacacaatagagagtagaaaac-aatagaaaaatcgacaaactgaagagttggattcttgaaaag------aaaattgacagaaactcttagccagat----taag---aaaaaagagagaagcttcaattaaatcagaaatgaaagaggccccttacaactgatgccacataaataaaaaatattataagagaataccatgaacaatggctatacaccaacgaactgggtaatctggaagaaatggataagttcctagaaatatacaacctaccaagattgcatcatgaacaaataattatcagaaaagacctgtaactagttaggagattgaattagtcatc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 247873 698 + 6586416 aatatatgttctgatcacaaaggaatgaaactagaaatcaatagcagaaggaaaactggaaacttcacaaattagtgaacatttaaaaacaaacactt----aagaaaccaaaggatcaaggaagatatcacaggcaaaaatagagactatcttaagacaaatgaaaacaaaaaggcaacacaccgaaacttacaggatacagtgagagcagtatcacgagggaaatttatagtggcgaaaacttacatttaaaaacaagatggatctcaaataaacaacctaacattacatctccaggaactagaaaaagaagaacaagttaaacacgaattagcagacagaggcaaatggtgatgattagaacagagataaacacaatacagagtagaaaac-aatagaaaaatcgacaaactgaagaggtgaatttttgaaaag------aaaattgacagaaactcttagccagat----taag---aaaaaagacagaagcttcaattaaatcagaaatgacagaggccccttacaactgatgccacataaataaaaaatattataagagaatatcatgaacgatggctatacaccaacgaattgggtaatctggaagaaatggataaatccctagaaatagacaacctaccgagattgaatcaggaacaaataattatctgaaaagacctgtaactagtaaggagattgaattagtcatc i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 323397 685 - 2409723 aatatattttctgatcacaaaggaatgaaactagaaatcgatagcggaagggaaactggaaacttaacaaattagtgaaaatttaaaaacacactcgt-aaaaaaaaaacaatggatcacagaagatatcacagagaaaaatagataatatcttaagacaaatgaaaacaaaaacgcaacataccaaaacctacaggatgcaatgagagcagtattaagagggaagtttatagtggtgaaaacttacacttaaaaagaggaggaatctcaaataaacaacctaacttcatagctcaaggaactggaaaaagaagaacaa-ttaaacacaaattagcagaaagaaggaagtggtaatgattacaacagagataaacacaatagagaatagaaa---aatagaaaaaccaacaaactgaagagctggctttttgaaaagatcaacaaaactgacaggaactcttagctagat----taagaaaaaaaaagaggcaagactcaattaaatc--aaatgaaagaggcccattacaactgatgccacatacataaaaaatattat--gataataccatgatcaatgtctatacaccaacaaattg------------------gataagttcctagaaatatacaacctaccaagattgaatcataaaaaaataattatctggaaagacctctaaccagcaaggaaacagaattagtcatc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 458689 689 - 2125214 aatatattttctgatcacaaaggaatgaaactagaaatcaatagcagaagggaaactgcaaacttcaaaaattagtgaaaatttaaaaacacactcttaaaaaaaaaaacaaaggatcaaggaagatatcacagagaaaaatagagactatcttaagacaaatgaaaacaaaaatgcaacataccaaaacttacaggatgcaatgagagcagtattaagagggaagtttatagtggtgaaagcttacacttaaaaagaagaggaatctcaggtaaacaacctaacttcatagctcaaggaactggaaaaagaagaacaa-ttaaacacaaattagcagaaagaaggaagtggtaataattacagcagagataaacacaatagagaatagaaaagtaatagaaaaaccaacaaactgaagagctggctttttgaaaagatcaacaaaattgatgggaacttttagctagat----taag--aaaaaaagagacaagactcaattaaatcagaaatgaaagaggcccattacaactgatgcgacataaataaaaaacattataagagaataccatgatcaatgtctatacacc-acaaattg------------------gataaattcctagaaatatacaacctaccaagactgaatca-gaaaaaataattatctggaaagacctataactagcaaggaaatagaattagtcatc i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e calJac3.chr2 146610677 13397 - 204313951 I a score=3178498.000000 s hg38.chr7_KI270899v1_alt 92979 449 + 190869 aaaaatctcccaaaaaagaaaagcccaggacc----agatggctttaccggagaattctaccaaggatttaaataattaacagcaatcctcctcacattcttctgaaaagctaaacaagaggaacacttccaacctcaatgtataaggccagcattatcctgataccaagcccagacaagaaagctacaggaaaagaaaactacagaccgattttcccgataact--gctgatgccaaatccccaacaaaatactagcaaactgtattccgtagcacatt-aaaggattatactccctga-ccaagtgggatttactcctggaatggaaggatggctcaaaatatgaacatcaatcaagataatctgccacactgtcataatgaaggacaaaaactacacgactgtctcaattgat-agagaaaaaggacttgagaaaatccaacaccctgttatgag s panTro5.chrUn_NW_015974889v1 12158 437 + 17818 aaaaatctcccaaaaaagaaaagcccaggacc----agatggctttactggagaattctaccaaggatttaaataattaacagcaatcctcctcacattcttctgaaaagctaaacaagaggaacacttccaacctcaatgtataaggccagcattatcctgataccaagcccagacaagaaagctacaggaaaagaaaactacagaccaatttccccgataact--gttgatgccaaatccccaacaaaatactagcaaactatattccgtagcacatt-aaaggattacactcactga-ccaagtgggattt------------gaaggatggctcaaaatatgaacatcaatcaagataatctgccacactgtcataatgaaggacaaaaactacaggactgtctcaattgat-agagaaaaaggacttgagaaaattcaacaccctgttatgag i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 54303 448 - 432965 aaaaatctccc-aaaaagaaaagcccaggacc----agatggctttaccggagaattctatcaaggatttaaataattaacagcaatcctcctcacattcttctgaaaagctaaacaagaggaatacttccaacctcaatgtataaggccagcattatcctgataccaagcccagacaagaaagctacaggaaaagaaaactacagaccgatttccccgataact--gttgatgccaaatccccaacaaaatactagcaaaccatattccgtagcacatt-aaaggattatactccctga-ccaagtgggatttactcctggaatggaaggatggctcaaaatatgaacatcaatcaagataatctgccacactgtcataatgaaggacaaaaactacacgactgtctcaattgat-agagaaaaaggacttgagaaaattcaacaccctgttatgag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 110789 449 + 85365473 aaaaatcccccaaaaaggaaaagcccaagaac----agatggctttactggagaattctaccaagcatttaaataattaacagcaatcctcctcacactcttctgaaaagctaaacaagaggaacacttccagcctcaatgtatgaggccagcattatcctgacaccaagcccagacaagaaagctacaggaaaagaaagctacagaccgatttccctgataact--gttgatgccaaatccccaacaaaatactagccaaccatattctgcagcacattaaaaggattatacaccctga-ccaagtgggatttactcctggaatggaaggatggctcaacatatgaatgtcaatcaagataatctaccacattatcataatgaaggacaaaaactacacgaccgtctcaattgat-agagaaaaagggcttgagaaaattcaacaccctgtt-tgag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33959985 449 + 185818997 aaaaatcttccaataaagaaaagcccaggact----agatggctttactggagaattctaccaaacatttaaataactaacagcaatcctcctcatactcttctgaaaagctaaacaagaggaatacttcgaacctcattgtatgaggccagcattatcctgacgccaaacccagacaataatgctacaggaaaagaaaactacagaccgatttccccggtaact--gttgatgccaaatcctcaaccaaatactagtaaaccatagtccacagcacactaaaaggattctacaccctga-ccaagtgggatttattcctggagtggaaggagggctcaacatatgaatgtcaatcaagataatccaccacagtatcataatgaaggac-aaaactatgcgaccgtctcaactggt-agagaaaaaggacttgagaaaattcaacaccctgttatggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33576323 449 + 192294377 aaaaatcttccaataaagaaaagcccaggact----agatggctttactggagaattctaccaaacatttaaataactaacagcaatcctcctcacactcttctgaaaagctaaacaagaggaacacttcgaaccttattgtatgaggccagcattatcctgacgccaaacccagacaataaagctacaggaaaagaaaactacagaccgatttccccggtaact--gttgatgccaaatcctcaaccaaatactagtaaaccatagtccacagcacactaaaaggattctacaccctga-ccaagtgggatttattcctggagtggaaggagggctcaacatatgaatgtcaatcaagataatccaccacagtatcataatgaaggac-aaaactatgcgaccgtctcaactggt-agagaaaaaggacttgagaaaattcaacaccctgttatggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4337544 449 - 9440265 aaaaatcttccaataaagaaaagcccaggact----agatggctttactggagaattctaccaaacatttaaataactaacagcaatcctcctcacactcttctgaaaagctaaacaagaggaacacttcgaacctcattgtatgaggccagcattatcctgacgccaaacccagacaataaagctacaggaaaagaaaactacagaccgatttccccggtaact--gttgatgccaaatcctcaaccaaatactagtaaaccatagtccacagcacactaaaaggattctacaccctga-ccaagtgggatttattcctggagtggaaggagggctcaacatatgaatgtcaatcaagataatccaccacagtatcataatgaaggac-aaaactatgcgaccgtctcaactggt-agagaaaaaggacttgagaaaattcaacaccctgttatggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16928611 450 - 21915920 aaaaatcttccaataaagaaaagcccaggact----agatggctttactggagaattctaccaaacatttaaataattaacagcaatcctcctcacactcttctgaaaagctaaacaagaggaacacttcgaacctcattgtatgaggccagcattatcctgacgccaaacccagacaataaagctacaggaaaagaaaactacagaccgatttccccggtaact--gttgatgccaaatcctcaaccaaatactagtaaaccatagtccacagcacactaaaaggattctacaccctga-ccaagtgggatttattcctggagtggaaggagggctcaacatatgaatgtcaatcaagataatccaccacagtatcataatgaaggac-aaaactatgcgaccgtctcaactgataagagaaaaaggactcgagaaaattcaacaccctgttatggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 67453 449 - 21531802 aaaaatcttccaataaagaaaagcccaggacc----ggatggctttactggagaattctaccaaacatttaaataattaaccgcaatcctcctcacactcttctgaaaagctaaacaaaagcaccacttcgaacctccttgtatgaggccagcattatcctgacgccaaacccagacaataaagctacaggaaaagaaaactacagaccgatttccccggtaact--gttgatgccaaatcctcaaccaaatactagcaaaccatagtccacagcacacgaaaaggattctacaccctga-ccaagtgggatttattcctggagtggaaggatggctcaacatatgaatgtcaatcaagataatccaccacagtatcataacgaaggac-aaaactacgcgaccgtctcaaccgat-agagaaaaaggacttgagaaaattcaacaccctgttatggg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 91639 449 - 2515279 aaaaatcttccaataaagaaaagcccaggact----agatggctttactggagaattctaccaaacatttaaataattaacagcaatcctcctcacacttttctcaaaagctaaacaagaggaacacttcgaacctcattgtatgaggccagcattatcctgacgccaaacccagacaataaagctacaggaaaagaaaactacagaccgatttccccggtaact--gttgatgccaaatcctcaaccaaatactagtaaaccatagtccacagcacactaaaaggattctacaccctga-ccaagtgggatttattcctggagtggaaggagggctcaacatatgaatgtcaatcaagataatccaccacagtatcataatgaaggac-aaaactatgcgaccgtctcaactgat-agagaaaaaggacttgagaaaattcaacaccctgttatggg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 248571 449 + 6586416 aaaaatcttccaataaagaaaagcccaggacc----ggatggctttactggagaattctaccaaacatttaaataattaacagcaatcgtcctcacactcttctgaaaagctaaacaagaagaacacttcaaacctcattgtatgaggccagcattatcctgatgccaaacccagacaataaagctacaggaaaagaaaactacagaccgatttccccggtaact--gttgatgccaaatcctcaacccaatgctagtaaaccgtagtccacagcacactaaaaggattctacaccctga-ccaagtgggatttattcctggagtggaaggatggcttaacatatgaatgtcaatcaagataatccaccacagtatcataacaaaggac-aaaactacgcgaccgtcccaactgac-agagaaaaaggacttgagaaaattcaacaccctgttatggg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146624074 454 - 204313951 aaaaatctcccaaaaagtgaaagcccaggaccagatagatggctttactggagaattctaccaaacatttaaataatgaatggcaatcctcctcaaactcttctaaaaagctaaacaagaggaacacttccaacctcaatgtatgaggccagcattatcctgataccaacaccagacaataaagctacaggaaaagaaaactacagaccaatttcctcgataact--gttgatgcaaaatcctcagcaaaatactagcaaaccatattccacagcacatcaaaaggatgatacaccctaa-ccaaaagggatttattactggaatggaaggatggctcaacatacaaaagtcaacctagataatgaaccacattatcataatgaaagacaaaaactatacaaccttctcagttgac-agagaaaaggcacttgagaaaattcaacaccctgtgatgag i calJac3.chr2 I 13397 C 0 s saiBol1.JH378296 324082 450 - 2409723 aaaaatctcgcaaaaaatgaaagcccaagaccagatagatggctttactgcagaattctaccaaacatttacataatgaacggcaaatctcctcaaactcttctgaaaagctaaacaaaaggaacacttccaacctcattgtatgaggccagcattatcctgataccgacaccagacaataaagctacag-----gaaaactacagaccaattttcctgataact--gttgatgcaaaatcctcaacaaaatgctggcaaaccatattccatggcacatcgaaaggatgatacaccctgacccaagagggatttattactgcaatggaaggatggctcaacgtatgaaagtcaacctggataatgaaccacattatcataacgaaggacaaaaactacacaaccttctcagtcgac-agagaaaaaggacttgagaaaattcaacgccctgtgatgag i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 459378 456 - 2125214 aaaaatctcgcgaaaaatgaaagcccagaaccaggtagacggctttactggagaattctaccaaacatttaaataatgaacggcaatcctcctcaaactcttctgaaaagctaaacaaaaggaacacttccaacctcattgtatgaggccagtgttatcctgacaccaacaccagaaaataaagctacaggaaaagaaaactacagaccaatttccctgataactaagttgatgcaaaatcctcaacaaaatactagcaaaccatattccatagcacatcaaaaggatgatacaccctga-ccaagagggatttattactggaatggaaggatggctcaacatacaaaagtcaacctagataatgaaccacattatcataataaaggacaaaaactacacaaccttctcggttgac-agagaaaaaggacttgagaaaattcaacaccctgtgatgag i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 60995122 4818 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=5556680.000000 s hg38.chr7_KI270899v1_alt 93428 737 + 190869 aaaaactGTAACTC--TGCATGGTTGCGTCCTGTTTGCACCCTGAAGTTCTCCAGACCTACT----TTCCCAAAGGACCCAACAGATTCAAGCCTCATCTGCAGGAGAATCGAGTCTCTTCCATCTCCGCG-GGCCT-GGGCAGGTCTGTTTCCTCTCTGGGTCTGCCATTCCCTTCTGACCAGGGATAGAGATCAGCCTGGAAAGCTGTAAGCTGCACCTGC------------CTGAGGAACCTAG--GTGTGCCCTTTCCCTGTGACCCTTCCCTGAG-------GGTGTTCCAAAGGCACATGGCAAGG--CTGCTTCACCCCAGTCATTCACGGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTGATCCAACAGGCTTGAACACACACCCTCCTTAACTTCCCTCCTTTCTCTGCATTGGAAACTAGGGGAGAGTTATTTGCCTAATTATGCACGTTGTTTAGTGCCTTTGAGCATCAACATTTAGTGTTATGCTCCTGAGAGGCCAAGTGCTTTACAGCATTTTCTTCAGTATTATATTCCATGTTAATTGCAAGCAGGCCTATTAAAG-GCAGGGCTGACTTCACAAACAGCCAGCAAAAGCACAGAG-GGGCCGCACTTGCAGGCAGCAGGCCTCAGGCTCATTAAGGAGACCCAGAAAGCTGAGGACTCC--TTGCCCT---------TGAAAGGCCCTGTGTACAGCCAGCATGCCGGAAAGAGCCTCGGAGCTCCGTGGATTTCAAGGCAAA s panTro5.chrUn_NW_015974889v1 12595 739 + 17818 aaaaactgtaaacCGATGCATGGTTGTGTCCTGTTTGCACCCTGAAGTTCTCCAGACCTACT----TTCCCAAAGGACCCAACAGATTCAAGCCTCATCTGCAGGAGAATCGAGTCTCTTCCATCTCCGCG-GGCCT-GGGCAGGTCTGTTCCCTCTCTGGGTCTGCCGTTCCCTTCTGACCAGGAATAGAGATCAGCCTAGAAAGCTGTAAGCTGCACCTGC------------CTGAGGAACTGAG--GTGTGCCCTTTCCCTGTGACCCTTCCCTGAG-------GGTGTTCCAAAGGCACATGGCAAGG--CTGCTTCACCCCAGTCATTCACGGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCAAGCATCACTGATCCAACAGGCTTGAACACACACCCTCCTTAACTTCCCTCCTTTCTCTGCATTGGAAACTAGGGGAGAGTTATTTGCCTAATTATGCAGGTTGTTTAGTGCCTTTGCGCATCAACATTTAGTGCTATGCTCCTGAGAGGCCAAGTGCTTTACAGCATTTTCTTCAGTATTATATTCCATGTTAATTGCAAGCAGGCCTATTAAAG-GCAGGGCTGACTTCACAAACAGCCAGCAAAAGCACAGAG-GGGCCGCACTTGGAGGCAGCAGGCCTCAGGCTCATTAAGCAGGCCCAGAAAGCTGAGGACTCC--TTGCCCT---------TGAAAGGCCCTGTGTACAGCCAGCATGCCGGAAAGAGCCTCGGAGCTCCGTGGATTTCAAGGCAAA i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 54751 737 - 432965 aaaaactGTAACTC--TGCATGGTTGTGTCCTGTTTGCATCCTGAAGTTCTCCAGACCTACT----TTCCCAAAGGACACAACAGATTCAAGCCTCATCTGCAGGAGAATCGAGTCTCTTCCCTCTCCGCG-GGCCT-GGGCAGGTCTGTTCCCTCTCTGGGTCTGCCATTCCCTTCTGACAAGGGATAGAGATCAGCCTGGAAAGCTGTAAGCTGCACCTGC------------CTGAGGAACTGAG--GTGTGCCCTTTCCCTGTGACCCTTCCCTGAG-------GGTGTTCCAAAGGCACATGGCAAGG--CTGCTTCACCCCAGTCATTCACGGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTGATCCAACAGGCTTGAACACACACCCTCCTTAACTTCCCTCCTTTCTCTGCATTGGAAACTAGGGGAGAGTTATTTGCCTAATTATGCACGTTGTTTAGTGCCTTTGCGCATCAACATTTAGTGTTATGCTCCTGAGAGGCCAAGTGCTTTACAGCATTTTCTTCAGTATTACATTCCATGTTAATTGCAAGCAGGCCTATTAAAG-GCAGGGCTGACTTCACAAACAGCCAGCAAAAGCACAGAG-GGGCCGCACTTGGAGGCAGCAGGCCTCAGGCTCATTAAGGAGGCCCAGAAAGCTGAGGACTCC--TTGCCCT---------TGAAAGGCCCTGTGTACAGCCAGCATGCCGGAAAGAGCCTCGGAGCTCCATGGATTTCAAGGCAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 111238 742 + 85365473 aaaaactGTAACTC--TGCATGGTTGTGCCCTGTTTGCATCCTGAAGTTCTCCAGACCTACT----TTCACAAAGGACCCAACAGACTCAAGCTTCATCTGCAGGAGAATCAAGTCTCTTCCATCTCCgtg-ggcct-gggcaggtctgttccctctctgggtctgccattcccttctgaccagggatagagatcagcctggaaatctgtaaggtGCACCTGC------------CTGAGGAACTGAG--GTGTGCCCTTTCCCTGTGACCCTTCCCTGAG-------GGTGTTCCAAAGGCACATGGCAAGG--CTGCTTCAACCTAGTCATTCACAGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTCATCCAACAGGCTTGA--ACACACCCTCCTTAACTTCCCTCCTTTCTCTGCATTGGAAACTAGGGGAGAGTTATTTGCCTAATTATGCACGTTGTTTAGTGCCTTTGCACATCAACATTTAGTGTTATGCTCCTGAGAAGCCAAGTGCTTTGCAGCATTTTCTTTAGTATTATATTCCATGTTAATTGCAAGCAGGCCTATTAAAG-GCAGGGCTGATTTCACAAACAGCCAGCAAAAGCACAGAG-GGGCCCCACTTGGAGGTATCAGGCCTCAGGCTCATTAAGGAGGCCAAGAAAACTGAGGACTCC--TTGCCCTTGAA-AGGCTGAAAGGCCCTGTGTACAGCCAGCATGCCGGAGAGAGCCTCGGAGCTTCGTGGA-TTCAAGGCAAA i nomLeu3.chr20 C 0 I 127 s rheMac8.chr3 33960434 747 + 185818997 aaaaactGTAACTC--TGCATGGTTGTGTCCTGTTTGCATCCTGAAGTTCTCCAGACCTACT----TTCCTAAAGGACCCAAGAGATTCAAGCCTCACCTGCAGGAGAACCGAGGCTCTTCCATCTCTGCA-GGCCT-GGGCAGGTCTGTTCCCTGTCTGGGCCTGCCGTTCCCTTCTGTCCGGGGATAAAGATCAGCCTGGAAAGCTGTAAGCTGCACCTGC------------CTAAGGAACTGAAGTGTGTGCCCTTTCCCTGTGACCCTTTACTGAG-------CGTGTTCCAAAGGCACATGGCAAGG--CTGCTTCACCCCAGTCATTCGCGGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTGATCCGACAGGCTTGG--ACACACCCTCCTTAACTTGCCGCCTTTCTCCGCCTTGTAAACTAGGGGAGAGTTATTTGCCTAATTATGCACGTTATTTAGTGCCTTTGTGCACCAACATTTAGTGTTATGATCCCGAGAGGCCAAGTGCTTTACAGCGTTTTCTTCAGTATTAGATTCCATGTTAGTAGCAAGCAGGCCTATTAAAG-GCAGGGCTGACTTCACCGACAGCCCGCAAAAGCACAGAGGGGGCCCCGCTTGGAGGCAGCAGGCCTCAGGCTCATTAATGAGGCCCAGAAAGCTGAGGACTCC--TTGCCCTTGAAGAGGCCAAAGGGCCCTGTATACAGCCCGCACGCCGGAGAGAGCCTCAGAGCTTCGTGGATCTCAAGGCAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33576772 747 + 192294377 aaaaactGTAACTC--TGCATGGTTGTGTCCTGTTTGCATCCTGAAGTTCTCCAGACCTACT----TTCCTAAAGGACCCAAGAGATTCAAGCCTCACCTGCAGGAGAACCGAGGCTCTTCCATCTCTGCA-GGCCT-GGGCAGGTCTGTTCCCTGTCTGGGCCTGCCGTTCCCTTCTGTCCGGGGATAAAGATCAGCCTGGAAAGCTGTAAGCTGCACCTGC------------CTAAGGAACTGAAGTGTGTGCCCTTTCCCTGTGACCCTTTACTGAG-------CGTGTTCCAAAGGCACATGGCAAGG--CTGCTTCACCCCAGTCATTCGCGGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTGATCCGACAGGCTTGG--ACACACCCTCCTTAACTTGCCGCCTTTCTCCGCCTTGTAAACTAGGGGAGAGTTATTTGCCTAATTATGCACGTTATTTAGTGCCTTTGTGCACCAACATTTAGTGTTATGATCCTGAGAGGCCAAGTGCTTTACAGCGTTTTCTTCAGTATTAGATTCCATGTTAGTAGCAAGCAGGCCTATTAAAG-GCAGGGCTGACTTCACCGACAGCCCGCAAAAGCACAGAGGGGGCCCCGCTTGGAGGCAGCAGGCCTCAGGCTCATTAATGAGGCCCAGAAAGCTGAGGACTCC--TTGCCCTTGAAGAGGCCAAAGGGCCCTGTATACAGCCCGCACGCCGGAGAGAGCCTCAGAGCTTCGTGGATCTCAAGGCAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4337993 747 - 9440265 aaaaactGTAACTC--TGCATGGTTGTGTCCTGTTTGCATCCTGAAGTTCTCCAGACCTACT----TTCCTAAAGGACCCAAGAGATTCAAGCCTCACCTGCAGGAGAACCGAGGCTCTTCCATCTCTGTA-GGCCT-GGGCAGGTCTGTTCCCTGTCTGGGCCTGCCGTTCCCTTCTGTCTGGGGATAAAGATCAGCCTGGAAAGCTGTAAGCTGCACCTGC------------CTAAGGAACTGAAGTGTGTGCCCTTTCCCTGTGACCCTTTACTGAG-------CGTGTTCCAAAGGCACATGGCAAGG--CTGCTTCACCCCAGTCATTCGCGGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTGATCCGACAGGCTTGG--ACACACCCTCCTTAACTTGCCGCCTTTCTCCGCCTTGTAAACTAGGGGAGAGTTATTTGCCTAATTATGCACGTTATTTAGTGCCTTTGTGCACCAACATTTAGTGTTATGATCCTGAGAGGCCAAGTGCTTTACAGCGTTTTCTTCAGTATTAGATTCCATGTTAGTAGCAAGCAGGCCTATTAAAG-GCAGGGCTGACTTCACCGACAGCCCGCAAAAGCACAGAGGGGGCCCCGCTTGGAGGCAGCAGGCCTCAGGCTCATTAATGAGGCCCAGAAAGCTGAGGACTCC--TTGCCCTTGAAGAGGCCAAAGGGCCCTGTATACAGCCCGCACGCCGGAGAGAGCCTCAGAGCTTCGTGGATCTCAAGGCAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16929061 747 - 21915920 aaaaactGTAACTC--TGCATGGTTGTGTCCTGTTTGCATCCTGAAGTTCTCCAGACCTACT----TTCCTAAAGGACCCAAGCGATTCAAGCCTCACCTGCAGGAGAACCAAGGCTCTTCCATCTCCGCA-GGTCT-GGGCAGGTCTGTTCCCTGTCTGGGCCTGCCGTTCCCTTCTGTCCGGGGATAAAGTTCAGCCTGGAAAGCTGTAAGCTGCACCTGC------------CTAACGAACTGAAGTGTGTGCCCTTTCCCTGTGACCCTTTACTGAG-------CGTGTTCCAAAGGCACATGGCAAGG--CTGCTTCACCCCAGTCATCCGCGGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTGATCCGACAGGCTTGG--ACACACCCTCCTTAACTTGCCGCCTTTCTCCGCCTTGTAAACTAGGGGAGAGTTATTTGCCTAATTATGCACGTTGTTTAGTGCCTTTGTGCACCAACATTTAGTGTTATGATCCTGAGAGGCCAAGTGCTTTACAGCGTTTTCTTCAGTATTAGATTCCATGTTAGTAGCAAGCAGGCCTATTAAAG-GCAGGGCTGACTTCACCGACAGCCCGCAAAAGCACAGAGAGGGCCCCGCTTGGAGGCAGCAGGCCTCAGGCTCATTAAGGAGGCCCAGAAAGCTGAGGACTCC--TTGCCCTTGAAGAGGCCAAAGGGCCCTGTATACAGGCTGCACGCCGGAGAGAGCCTCAGAGCTTCATGGATCTCAAGGCAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 67902 744 - 21531802 aaaaactGTAACTC--TGCATGGTTGTGTCCTGTTTGCATCCTGAAGTTCTCCAGACCTACT----TTTC-AAAGGACCCAAGAGATTCAAGCCTCACCTGCAGGAGAACCGAGGCTCTTCCATCTCCGCG-GGCCT-GGGCAGGTCTGTTCCCTGTCTGGGCCTGCCGTTCCCTTCTGTCCGGGGATAGAGATCAGCCTGGAAAGCTGTAAGCTGCATCTGC------------CTAAGGAACTGAG--GTGTGCCCTTTCCCTGTGACCCTTCGCTGAG-------CGTGTTCCAAAGGCACATGGCAAGG--CTGCTTCACCCCAGTCATTCGCGGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTGATCCGACAGGCTTGG--ACACACCCTCCTTAACTTGCCGCCTTTCTCTGCCGTGGAAACTAGGGGAGAGTTATTTGCCTAATTATGCGCGTTGTTTAGTGCCTTTGTGCACCAACATTTAGTGTTATGATCCTGAGAGACCAAGTACTTTACAGCATTTTCTTCAGCATTAGATTCCATGTTAGTAGCAAGCAGGACTATTAAAG-GCAAGACTGACTTCACTGACAGCCTGCAAAAGCACAGAGGGGGCCCCGCTGGGAGGCAGCAGGCCTCAGGCTCATTAAGGAGGCCCAGAAAGCTGAGGACTCC--TTGCCCTTGAAGAGGCCAAAGGGCCCTGTATACGGCCCGCGTGCCAGAGAGAGCCTCAGAGCTTCATGGATCTCAAGGCAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 92088 747 - 2515279 aaaaactGTAACTC--TGCATGGTTGTGTCCTGTTTGCATCCTGAAGTTCTCCAGACCTACT----TTCCTAAAGGACTCAAGCGATTCAAGCCTTACCTGCAGGAGAACCGAGACTCTTCCATCTCCGCA-GGCCT-GGGCAGGTCTGTTCCCTGTCTGGGCCTGCCGTTCCCTTCTGTCCGGGGATAAAGTTCAGCCTGGAAAGCTGTAAGCTGCACCTGC------------CTAACGAACTGAAGTGTGTGCCCTTTCCCTGTGACCCTTTACTGAG-------CGTGTTCCAAAGGCACATGGCAAGG--GTGCTTCACCCCAGTCATTCGCGGGACCCTGGGCCCTAGGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTGATCCGACAGGCCTGG--ACACACCCTCCTTAACTTGCCACCTTTCTCCGCCTTGTAAACTAGGGGAGAGTTATTTGCCTAATTATGCACGTTGTTTAGTGCCTTTGTGCACCAACATTTAGTGTTATGATCCTGAGAGGCCAAGTGCTTTACAGCGTTTTCTTCAGTATTAGATTCCATGTTAGTAGCAAGCAGGCCTATTAAAG-GCAGAGCTGACTTCACCGACAGCCCGCAAAAGCACAGAGGGGGCCCCGCTTGGAGGCAGCAGGCCTCAGGCTCATTAAGGAGGCCCAGAAAGCTGAGGACTCC--TTGCCCTTGAAGAGGCCAAAGGGCCCTGTATACAGCCCGCACGCCGGAGAGAGCCTCAGAGCTTCGTGGATCTCAAGGCAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 249020 744 + 6586416 gaaaactGTAACTC--TGCATAGCTGTGTCCTGTTTGCATCCTGAAGTTCTCCAGACCCACT----TTCC-AAAGGACCCAAGAGATTCAAGCCTCACCTGCAGGAGAACCGAGGCTCTTCCATCTCCGCC-GGCCT-GGGCAGGTCTGTTCCCTGTCTGGGCCTGCCGTTCCCTTCTGTCCGGGGATAGAGATCAGCCTGGAAAGCCGTGAGCTGCACCTGC------------CTAAGGAACTGAA--GTGTGCCCTTTCCTTGTGACCCTTCACTGGG-------TGTGCTCCAAAGGCACATGGCAAGG--CTGCTTCACCCCAGTCATTCCCAGGACCCTGGGCCCTAAGAAGCCAGCTCCAGGCCTCTCCCTAGCATCACTGATCCGACAGGCTTGG--ACACACCCTCCTTAACTTGCCGCCTTTCTCTGCCATGGAAACTAGGGGAGAGTTATTTGCCTAATTATGCACGTTGCTTAGTGCCTTTGTGCACCAACATTTAGTGTTATGATCCTGAGAGGCCAAGTGCTTGACAGCGTTTTCTTCAGCATTAGATTCCATGTTAGTAGCCAGCAGGCCTATCAAAG-GCAAGGCTGACTTCACCGACAGCCCGCAATAGCACAGAGGGGGCCCCACTTGGAGGCAGCAGGCCTCAGGCTCATTAGGGAGGCCCAGAAAGCTGAGGACTCC--TTGCCCTTGAAGAGGCTGAAGGACACTGCATGCAGCCAGCGCGCCGGAGAGAGCCTCGGAGCTTCGTGGCTCTCAAGGCAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146624528 719 - 204313951 aaaaactGTAACTC--TGCATCATTTAATCCTGTTTGCATCCTGAACTTCTCCAGACTTACT----TTCCAAAAGGACCCAAAAGATTCAAGCCTCATCTGTAGGAGAATCAAGGGTCTTCCATCTCCACG-GGCCTGGGGCAGGTCTGTCCCCTCTCTGGGCCTGCTGTTCCC--------AGGGATAGAGATCAGCCTGGAAAGCTGTAAGCTGCACCTGC------------CTAAGGAACTGAA--GTGTGACATTTTCCTGTGACCCTTCCCTGAG-------AGTATTCCAAAGGCACATGACAAGG--CTGCTTTG-CCCAGTCATTCACAGGATGCTGGGTCCTAGGAAGCCAGCCCCAGGGCTCTCCCTAGCATCATGGAGCCAACAGGCTTGA--ACACACCCTCCTTAACTTCCCTCCTTTCTCTACATTGGAAACTAGGGGAGAGTTATTTGCCTAATTATGCA----------TGCATTCGTG------CATTTAGTGTTCTGCTCCTGAGAGGCCAAGTGCTTTACAGGATTTTCTTCAGTATTATATTCCATGTTAATTGCAAGCAGGCCTACTAAAG-GCAGGACTGACTTCATGAACAGCCAGCAAAAGCACAGAGTGGACTTCACTGGGTGGTAGCAGACCTTGGGCTTATTAAGGAGGCCCAGAAAGCTGAGGACTCC--TTCCCCCTGAAGAGGCTGAAAGGCCC-ATGTACAGCCAGCCTGCCATAGAAAGCCTCAGAGC-TCACGGATTTCAAGGCAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 324532 734 - 2409723 aaaaacGGTAACTC--GGCATCGTTTTATCCCGTTTGCACCCTGAACTTCTCCAGACTTACT----TTCCAAAAGAACCCAACAGATTCAAGCCTCATCTGCAGGAGAATCGAGGGTCTTCCATCTCCGTG-GGCCTGGGGCAGGTCCATCCCCTCTCTGGGCCTGCTGTTCCC--------TGGGATAGAGATCAGCCTGGAAAGCTGTGAGCTGCACCTGC------------CTAAAGAACTGAA--GTGTGACCTTTTCCTGTGACCTTTCCCTGAG-------AGTATTCCAAGGGCACACGGCAAGG--CTGCTTTG-CCCAGTCATTCACAGGACCCTGGGCCCTAGGAAGCCAGCCCCAGGGATCTCCCTAGCATCACAGAGCCAACAGGCTTGA--ACATACCCTCCTTAACTTCCCTCCTTTCTCTACGTTGGAAACTAGGGGAGAGTTATTTGCCTAAGTGTGCACGCGATTTAGTGCCTCTGTGCATCAACATTTAGTGTTCTGCTCCTGAGAGGCCGAGTGCTTTACAGGATTTTCTTCAGTATTATATTTCATGTTAATTGCGAGCAGGCCTACTAAAG-GCAGGACTGACTTCACCAA-AGCCAACAAAAGCACAGAGTGGGCCTCACTGGGTCACAGCAGGCCTTGGGCTCATTAAGGAGGCCCAGAAAGCTGAGGACTCC--TTCCCCCTGAAGAGGCTGAAAGGCCC-ATGTACAGCAAGCCTGCCATAGAAAGCTTCCGAGCTTCATGGATTTCAAGGCAG- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 459834 734 - 2125214 aaaaactGTAACTC--TGCATCGTTTTATCATGTTTGCATCCTGAACTTCTCCAGACTTACT----TTCCAAAAGGACCCAATAGATTCAAGCCTCATCTGCAGGAGGATTGAGGGTCTTCCATCTCCGCG-GGCCTAGGGCAGGTCTGTCCCCTCTCTGGGTCTGCTGTTCCC--------AGGGATAGAGATCAGCCTGGAAAGCTGTAAGCTGCACCTGC------------CTAAGGAACTGAA--GTGTGACCTTTTCCTGTGACCCTTCCCTGAG-------AGTATTCCAAAGGCACATGGCAAGG--CTGCTTTG-CCCAGTCATCCAGAAGACCCTGGGCCCTACGAAGCCAGCCCCAGGACTCTCCCTAGCATCACAGAACCAACAGGCTTGA--ACACACCCTCCTTAACTTCCCTCCTTTCTCTACATTGT--ACTAGGGGAGAGTTACTTGCCTAATTATGCATGTTATTTAGTGCCTTTGTGCATCAACATTTAGTGCTCTGCTCCTGAGAGGCCAAGTGCTTTACAGGATTTTCTTCAGTATTATATTCCACGTTCATTGCAAGCAGGCCCGCTAAAG-GCAGGACTGACTTCACAAACAGCCAGCAAAAGCACAGAGTGGGCCTCACTGGGTCGCAGCAGGCCTTGGACTCATTAAGGAGGCCCAGAAAGCTGAGGACTCC--TTCCCCCCGAAGAGGCTGAAAGGCCC-ATGTACAGCCAGCCTGCCATAGGAAGCCTCAGAGCTTCATGGATTTCAAGGCAGA i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 60999940 696 - 77573801 AACAATTATCACTC--TGCATCATTTTGTCCTGCTTGTATACTAACCTTCTCCAGATCcactgaggttgcaagaggaccca---gatttgagtcttggctgtaggaaaattagagcctttccatcgctgtgtggtctcaggcaagtctgatcccactcccagcctgaccttcctttctgcacaggaagaatgaCCAGTCAAGGTACCTG--AGCCCCACCTGCACAGTGCTCCCATTAAAAGGCTGAA--GTATGTCCCTTCACTG---CTCCTGCCCAAGACTCTGAAGTATTCCAAAAGCATGCTGAAGAATTCTGCATCACCCCAGCCATTCACGGGGCCCTTCGGCCCAGGAAGTC----------CTCCGTTCAGCACAG--GGCCCAACAGG-TTGA--ACAC-CCCTCC--AACTTCCCTCCATCCTCTGCATCACAAACTAGGGGAGAGTTTTTTGCCCAATTATGCACATTATTTAGTGCTTCTGTGAGTAAACATTTAGTGGGATGCTTTTGATAGGCAAAGTGTATCACAGTCTTGTCGTCAGCCTTATATTGGATGTCAATTATAAGCAGGTCCATTAATGTGCAGGGGT---------AGGAGGTGGCTAAAGAAT-------------------GCCAGCAGG------------------GGCCTAGGGAGCCAGACACTCACGTGGCCCT---------TCCAGTGCCCTGTGAAAACAGAGTGTGGCAAAGACAGCCTGGGGGCTTTGTGGACTTCAAGGCAAA i canFam3.chr6 I 4818 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=1121130.000000 s hg38.chr7_KI270899v1_alt 94165 187 + 190869 AGGGAGCCAAACATGCACGGATGCCTCTTTCCTGTGCCTGGGGGTTTGTTTCTTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGAATTTCAATTGCACCATTGCTTAGTCACTCAACAGTCATCTGTCACTCACCAAAGCCACAG---------------------------------------AGTGGGGCCTGAGGGTCA-CTGGTGTCATGGATACACTTGCT-- s panTro5.chrUn_NW_015974889v1 13334 187 + 17818 AGGGAGCCAAACATGCACGGATGCCTCTTTCCTGTGCCTGGGGGTTTGTTTCTTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGAATTTCAATTGCACCATTGCTTAGTCACTCAACAGTCATCTGTCACTCACCAAAGTCGCAG---------------------------------------AGTGGGGCCTGAGGGTCA-CTGGTGTCATGGATACACTTGCT-- i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 55488 186 - 432965 AAGGAGCCAAACATGCACGGATGCCTCTTTCCTGTGCCT-GGGGTTCATTTCTTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGAATTTCAATTGCACCATTGCTTAGTCACTCAACAGTCATCTGTCACTCACCAAAGCCACAG---------------------------------------AGTGGGGCCTGAGGGTCA-CTGGTGTCATGGATACACTTGCT-- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33961181 185 + 185818997 AGGGAGCCACACATGCCTGGATGCCCCTTTCCTGTGCCCAGGGGTTTATTTCTTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGGATTTCCATTGCACCATCGCTCAGTCACTCAGCAGTCACCTGTCACTCACCAGAGCCACAG----------------------------------------GGGGGGCC-GAGGGTTA-CCGGTGCCATGGATACACTTGCA-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33577519 186 + 192294377 AGGGAGCCACACATGCCTGGATGCCCCTTTCCTGTGCCCAGGGGTTTATTTCTTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGGATTTCCATTGCACCATCGCTCAGTCACTCAGCAGTCACCTGTCACTCACCAAAGCCACAG---------------------------------------AGGGGGGCC-GAGGGTTA-CCGGTGCCATGGATACACTTGCG-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4338740 186 - 9440265 AGGGAGCCACACATGCCTGGATGCCCCTTTCCTGTGCCCAGGGGTTTATTTCTTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGGATTTCCATTGCACCATCGCTCAGTCACTCAGCAGTCACCTGTCACTCACCAAAGCCACAG---------------------------------------AGGGGGGCC-GAGGGTTA-CCGGTGCCATGGATACACTTGCG-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16929808 186 - 21915920 AGGGAACCACACATGCCTGGATGCCCCTTTCCTGTGCCCAGGGGTTTATTTCTTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGGATTTCCATTGCACCATCGCTCAGTCACTCAGCAGTCACCTGTCACTCACCAAAGCCACAG---------------------------------------AGGGGGGCC-GAGGGTCA-CCGGTGCCATGGATACACTTGCG-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 68646 187 - 21531802 GGGGAGCCACACATGTCTGGATGCCCCTTTCCTGTGCCCAGGGGTTTGTTTCTTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGGATTTCCATTGCACCATCGCTCAGTCACTCAGCAGTCACCCGTCACTCACCAAAGCCACAG---------------------------------------AGGGCGGCC-GAGGGTCACCCGGTGCCGTGGATACACTTGCA-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 92835 186 - 2515279 AGGGAGCCACACATGCCTGGATGCCCCTTTCCTGTGCCCAGGGGTTTATTTCTTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGGATTTCCATTGCACCATCGCTCAGTCACTCAGCAGTCACCTGTCACTCACCAAAGCCATAG---------------------------------------AGGGGGGCC-GAGGGTCA-CCGGTGCCGGGGATACACTTGCG-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 249764 217 + 6586416 AGGGAGCCACACACGCCTGGATGCCCCTTTCCTGTGCCCATGGCTTTGTTTATTCAGGAAATTCCAAATGGG-TCTCATTCCCTGGCATTT--------CCATCGTTCAGTCACTCAGCAGTCACCTGTCACTCACCAAAGCCACAGAGGGCGGCCAGAGGGACCTGTCACTCACCAAAGCCACAGAGGGGGGCC-GAGGGTCA-CCGGTGCCATGGATACACTTGTG-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146625247 186 - 204313951 AGGAGGCCAAATATACATGGATGTCCCTCTCCTGTGACCAGGGGTTTACTTCTTAAGGAAACTCCAAATGGG-TCTGATCCCCTGGCATTTCATTTGCACCATGGCTTAGTCAC-GAACAGTCATCTGTCACTCACCAAAGCCACAG---------------------------------------AGTGGGGCCTGAGGGTCG-CTGGTGTCATGGATACACCTGCt-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 325266 187 - 2409723 AGGAGGCTGAATAGACATGGATGTCCCCCTCCTGTGTCCAGGGTTTTACTTCTTAAGGAAACTCCAGATGGG-TCTGATCCCCTGGCATTTCATTTGCACCATTGCTCAGTCACTGAGCAGTCACCTGTCACTCACAAAAGCCACAG---------------------------------------AGTGGGGCCTGAGGGTCG-CTGGTGTCATGGCTATACCTGCt-- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 460568 187 - 2125214 AGGAGGCCGAATATACATGGATGTCCCTCTCCTGTGTCCAGGGGTTTACTTCTTAAGGAAACTCCAAATGGG-TCTGATCCCCTGGCATTTCATTTGCACCACTGTTCAGTCACTGAACAGTCATCTGTCACTCACCAAAGCCACAG---------------------------------------AGTGGGGCCTGAGGGTCG-CTGGCGCCATGGATACACCTGCT-- i cebCap1.NW_016107703v1 C 0 I 122 s canFam3.chr6 61000636 161 - 77573801 AGGGAACCAAAGGTGCATAGAGG------------------------ATCTCT----AATGCTCTAGATGGGATTTAATTCTCTAGAATTTCAATTGTGCCAACATTTAAGCACTCAACAGCCAGCTGTCACTT-CTAAAGTCACAG---------------------------------------AGTGGGTCTTGTGGGCCA-CAGACATCATTGACACAGTTTGGTG i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e nomLeu3.chr20 111980 127 + 85365473 I a score=17641.000000 s hg38.chr7_KI270899v1_alt 94352 3 + 190869 GAT s panTro5.chrUn_NW_015974889v1 13521 3 + 17818 GAT i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 55674 3 - 432965 GAT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33961366 3 + 185818997 GAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33577705 3 + 192294377 GAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4338926 3 - 9440265 GAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16929994 3 - 21915920 GAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 68833 3 - 21531802 GAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 93021 3 - 2515279 GAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 249981 3 + 6586416 GAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146625433 3 - 204313951 aat i calJac3.chr2 C 0 I 89 s saiBol1.JH378296 325453 3 - 2409723 aat i saiBol1.JH378296 C 0 I 63 s canFam3.chr6 61000797 3 - 77573801 GGT i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 460755 122 - 2125214 I e nomLeu3.chr20 111980 127 + 85365473 I a score=1288424.000000 s hg38.chr7_KI270899v1_alt 94355 307 + 190869 TTGTGACCCAAGTCAGGTCTGGATTACAAAGGGCTTTGAATGAATGACTGAGGTTTTGAGGCCAGATGATAGAGAAAGGCAGCCATGGGGGATTTT--GGAGAGAGGCCAGGGTGAGCGGTGGGAAGACCAGGCAGGAGAGTCCAAGGGCATCCGTGGAAGCGCACCTGGGGTGGAGAGGACTCGTGGTCCAGATGAGGCACCACTGAGCCGCGTTGGGAGAAGCCTGCAGATGGGAGGTCACTTGGCTGTGAGCAGATCCACGCCTGGG-AGGTGGCAGAAGCC-AGATGGGATACCATAAAAATCCACA s panTro5.chrUn_NW_015974889v1 13524 307 + 17818 TTGTGACCCATGTCAGGTCTGGATTACAAAGGGCTTTGAATGAATGACTGAGGTTTTGAGGCCAGATGATAGAGAAAGGCAGCCATGGGGGATTTT--GGAGAGAGGCCAGGGTGAATGGTGGGAAGACCAGGCAGGAGAGTCCAAGGGCATCCATGGAAGGGCACCTGGGGTGGAGAGGACTCGTGGTCCAGATGAGGCACCACTGAGCCGCGTTGGCAGAAGCCTGCAGATGGGAGGTCACTTGGCTGTGAGCAGATCCACACCTGGG-AGGTGGCAGAAGCC-AGATGGGATACCATAAAAATCCACA i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 55677 307 - 432965 TTGTGACCCAAGTCAGGTCTGGATTACAAAGGGCTTTGAATGAATGACTGAGGTTTTGAGGCCAGACGATAGAGAAAGGCAGCCATGGGGGATTTT--GGAGAGAGGCCAGGGTGAGCGGTGGGAAGACCAGGCAGGAGAGTCCAAGGGCATCCGTGGAAGGGCACCTGGGGTGGAGAGGACTCGTGGTCCAGATGAGGCACCACTGAGCCGCGTTGGGAGAAGCCTGCAGGTGGGAGGTCACTTGGCTGTGAGCAGATCCACGCCTGGG-AGGTGGCAGAAGCC-AGATGGGATACCATAAAAATCCACA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33961369 307 + 185818997 TTGTGACCCAAGTCAGGTCTGGATTACAAAGGGCCTTGAATGAATGACTGAGGTTTTGGGGCCAGATGGTAGAGAAAGGCAGCCATGGGGGATTTT--GGAGAGAGGCCAGGGTGAACGGTGGGCAGACCAGGCAGGACAGTCCAAGGGCATCCGTGGAAAGGCGCCTGGGGTAGAGAGGACCCCTGGTCCCGATGAGGTGCCGCCGAGCCGCGTTGGGAGAAGCCGGCAGATGGGAGGTCACCTGGCTGTGATCAGGTCCACGCCTGGG-AGGTGGCAGAAGCC-AGATGGAAAACAATAAAAATCCACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33577708 307 + 192294377 TTGTGACCCAAGTCAGGTCTGGATTACAAAGGGCCTTGAATGAATGACTGAGGTTTTGGGGCCAGATGGTAGAGAAAGGCAGCCATGGGGGATTTT--GGAGAGAGGCCAGGGTGAACGGTGGGCAGACCAGGCAGGACAGTCCAAGGGCATCCGTGGAAAGGCGCCTGGGGTAGAGAGGACCCCTGGTCCCGATGAGGTGCCGCCGAGCCGCGTTGGGAGAAGCCGGCAGATGGGAGGTCACCTGGCTGTGATCAGGTCCACGCCTGGG-AGGTGGCAGAAGCC-AGATGGAAAACAATAAAAATCCACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4338929 307 - 9440265 TTGTGACCCAAGTCAGGTCTGGATTACAAAGGACCTTGAATGAATGACTGAGGTTTTGGGGCCAGATGGTAGAGAAAGGCAGCCATGGGGGATTTT--GGAGAGAGGCCAGGGTGAACGGTGGGCAGACCAGGCAGGACAGTCCAAGGGCATCCGTGGAAAGGCGCCTGGGGTAGAGAGGACCCCTGGTCCCGATGAGGTGCCGCCGAGCCGCGTTGGGAGAAGCCGGCAGATGGGAGGTCACCTGGCTGTGATCAGGTCCACGCCTGGG-AGGTGGCAGAAGCC-AGATGGAAAACAATAAAAATCCACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16929997 307 - 21915920 TTGTGACCCAAGTCAGGTCTGGATTACAAAGGGCCTTGAATGAATGACTGAGGTTTGGAGGCCAGATGGTAGAGAAAGGCAGCCATGGGGGATTTT--GGAGAGAGGCCAGGGTGAACGGTGGGCAGACCAGGCAGGACAGTCCAAGGGCATCCGTGGAAAGGCGCCTGGGGTAGAGAGGACCCCTGGTCCCGATGAGGTGCCCCCGAGCCGCATTGGGAGAAGCCAGCAGATAGGAGGTCACCTGGCTGTGATCAGGTCCACGCCTGGG-AGGTGGCAGAAGCC-AGATGGAAAACAATAAAAATCCACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 68836 307 - 21531802 TTGTGACCCAAGTCAGGTCTGGATTACAAAGGGCCTTGAATAAATGACTGAGGTTTTGGGGCCAGATGGTAGAGAAAGGCAGCCATGGGGGACTTT--GGAGAGAGGCCAGGGTGAACGGTGGGCAGACCAGGCAGGACAGTCCAAGGGCACCCGTGGAAAGGCGCCTGGGGTAGAGAGGACCCGTGGTCCCGATGAGGTGCCACCGAGCCGCGTTGGGAGAAGCTGGCAGATGGGAGGTCACCTGGCTGTGAGCAGGTCCACGCCTGGG-AGGTGGCAGAAGCC-AGATGGAAAACAATAAAAATCCACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 93024 307 - 2515279 TTGTGACCCAAGTCAGGTCTGGATTACAAAGGGCCTTGAATGAATGACTGAGGTTTTGGGGCCAGATGGTAGAGAAAGGCAGCCATGGGGGATTTT--GGAGAGAGGCCAGGGTGAACGGTGGGCAGACCAGGCAGGACAGTCCAAGAGCATCCGTGGAAAGGCGCCTGGGGTAGAGAGGACCCCTGGTCACCATGAGGTGCCCCCGAGCCACGTTGGGAGAAGCCGGCAGATGGGAGGTCACCTGGCTGTGATCAGGTCCATGCCTGGG-AGGTGGCAGAAGCC-AGATGGAAAACAATAAAAATCCACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 249984 307 + 6586416 TTGTGACCCAAGTCAGGTCTGGATTACAAAGGGCCTTGAATGAATGACTGAGGGTTTGGGGCCAGATGGTAGAGAAAGACAGCCATGGGGGATTTT--TGAGAGAGGCCAGGGTGAACGGTGGGCAGACCAGGCAGGACCGTCCAAGGGCATCCGTGGAAAGGCACCTGGTGTAGAGAGGACCCGTGGTCCCGATGAGGTGCCGCTGAGCTGCGTTGGGAGAAGCCGGCAGATGGGAGGTCACTTGGCTGTGAGCAGGTCCACGCCTGGG-AGATGGCAGAAGCC-AGATGGAAAACAATAAAAATCCACA i colAng1.NW_012117710v1 C 0 C 0 s canFam3.chr6 61000800 292 - 77573801 TTGTGGGGACAACTGGATCTAGATTACAAAGGTTTTTTAATTATTCACTGAGGTTTGGGGGTCAGACAGTGGAGAAACAGAGTCATGGAGAGTTTCAGAGAGAGAGATCTGCATGAATGGTGGAAAGACCAGATAGGTGATGCC-AGTACAACACTGTAAAGGTACCTGGAAATCCAAGGACCTGTGGTCTAGAAGG--------TGAGCTGAGTGGAGA--------CATGTGACCTGCATCTTGGCCATGTGCAGACCCAAACCTGGGAAGGTGGCAGAGGCCGGGATTCGAAACAATAAAAATCCC-- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 325456 63 - 2409723 I e cebCap1.NW_016107703v1 460755 122 - 2125214 I e calJac3.chr2 146625436 89 - 204313951 I e nomLeu3.chr20 111980 127 + 85365473 I a score=161729.000000 s hg38.chr7_KI270899v1_alt 94662 49 + 190869 TTTAATTTTTCCACTGGTGTGTGCGCTTCTGGAACTCcccacacagcag s panTro5.chrUn_NW_015974889v1 13831 37 + 17818 TTTAATTTTTCCATTGGTGAGTGCGCTTCTGGAACTC------------ i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 55984 49 - 432965 TTTAATTTTTCCATTGGTGTGTGCGCTTCTGGAACTCcccacacagcag i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33961676 35 + 185818997 TTTAATGCTTCCATTGGT--GTGCGTATCTGGAATTC------------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578015 35 + 192294377 TTTAATGCTTCCATTGGT--GTGCGTTTCTGGAATTC------------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339236 35 - 9440265 TTTAATGCTTCCATTGGT--GTGCGTTTCTGGAATTC------------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930304 35 - 21915920 TTTAATGCTTCCATTGGT--GTGCATTTCTGGAATTC------------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69143 35 - 21531802 TTTAATGCTTCCATTGGT--GTGCGTTTCTGGAATTC------------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 93331 35 - 2515279 TTTAATGCTTCCATTGGT--GTGCGTTTCTGGAATTC------------ i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 250291 35 + 6586416 TTTAATGTTTCCATTGGT--GTGCGTTTCTGGAATTC------------ i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146625525 35 - 204313951 ttttatttttCCCTCAGT--GTGCGCTTCTGGAATTC------------ i calJac3.chr2 I 89 C 0 s saiBol1.JH378296 325519 35 - 2409723 ttttatttttCCATTGGT--GTGCACTTCTGGAATTC------------ i saiBol1.JH378296 I 63 C 0 s canFam3.chr6 61001092 28 - 77573801 TTTTATTTTTCCACAGAA--AT-------TGAAATTC------------ i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 460755 122 - 2125214 I e nomLeu3.chr20 111980 127 + 85365473 I a score=3072319.000000 s hg38.chr7_KI270899v1_alt 94711 486 + 190869 cccacacagcagcTTAGGAGTGGGTCCATATTCCGAC----TACTTCATCTCTGGTGTAA------TCATGACACTCTCTGGCTACCCCAGGAGGGCATGCACCAACATGGCGCTgggcataaatttgagactgagctgccttaggttcgagtccagctctgagccagccagctgtcct-cagcagtgctctggacccctctgccctt---c-agttcctcatttataaggtgggagtaatGGAAGCATATCTGAAGCGTGAAGCCGGGGCCTTGTCTGCTCTGAGCT--CCCTCAGGATGTTCCAGGCATGTAATG-GG-GAGAGCAGAGGCTGAGA-CCTGAGAGCCAATCACATG-TTTCCCATCAAGAAGTTTCGACA-CAGATTCtaagtctgaggaaaaaggcaagactacggttcagcaacaaactggggacttcaataacacactttcgttatgag-tagaacaagtagg-caaaagatcaacaaagaaatgtcaga-ttgga s panTro5.chrUn_NW_015974889v1 13868 486 + 17818 CCCACACAGCAGCTTAGGAGTGGGTCCATATTCCGAC----TACTTCATCTCTGGTGTAA------TCATGACACTCTCTGGCTACCCCAGGAGGGCATGCACCAACATGGAGCTgggcataaatttgagactgagctgccttaggttcgagtccagctctgagccagccagctgtcct-cagcagtgctctggacccctctgccctt---c-agttcctcatttataaggtgggagtaatGGAAGCATATCTGAAGCGTGAAGCCGGGGCCTTGTCTGCTCTGAGCT--CCCTCAGGATGTTCCAGGCATGTAATG-GA-GAGAGCAGAGGCTGAGA-CCTGAGAGCCAATCACATG-TTTCCCATCAAGAAGTTTTGACA-CAGATTCtaagtctgaggaaaaaggcaagactacagttcagcaacaaactggggacttcaataacacactttcgttatgag-tagaacaagtagg-caaaagatcaacaaagaaatgtgaga-ttgga i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 56033 487 - 432965 cccacacagcagcTTAGGAGTGTGTCCATATTCCGAC----TACTTCATCTCTGGTGTAA------TCATGACACTCTCTGGCTACCCCAGGAGGGCATGCACCAACATGGCGCTgggcataaatttgagactgagctgccttaggttcgagtccagctctgagccagccagctgtcct-cagcagtgctcgggacccctctgccctt---c-agttcctcatttataaggtgggagtcatGGAAGCATATCTGAAGCGTGAAGCCAGGGCCTTGTCTGCTCTGAGCT---CCTCCGGATGTTCCAGGCATGTAATG-GG-GAGAGCAGAGGCTGAGA-CCTGAGAGCCAATCACATG-TTTCCCATCAAGAAGTTTCGACACCAGATTCtaagtctgaggaaaaaggcaagactacagttcagcaacaaactggggacttcaataacacacttttgttatgag-tagaacaagtaggccaaaagatcaacaaagaaatgtcaga-ttgga i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33961711 486 + 185818997 CCCACACAGCAGCTTAGGAGTGGGTCCGTATTCCGAC----TACTTCGTCTCTGGTGTAA------TCATGACACTTTCTGGCTACCCCAGCAGGGCACGGACCCACCTGGAGCTgggcataaatctgagacagagttgttttaggttcaagtccagctctgagccagccagctgtcct-cagcagtgctcttgacccctctgccctt---c-agttcctcatttataacgtgggagtaatGGAAGCATATCTGAAGCATGAAGCCAGGGCCTCACCCGCTCTGAGCT--CTCTCAGGACGTTCCAGGCGTGTGAGG-GGAGAAAGCAGAGGCCTAGA-CCTGAGAGCCAATCCCATG-TTTCCCATCAAGAAGTTTCGACG-CCAATTCCAAGTCTGAGGAAAAAGGCAAGACTataattccgcagtaaagcggggacttcaataacacactttgattacggg-tagaacaagtaag-caaaagatcaacaaggaaatgtcaga--tgga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578050 486 + 192294377 CCCACACAGCAGCTTAGGAGTGGGTCCGTATTCCGAC----TACTTCGTCTCTGGTGTAA------TCATGACACTTTCTGGCTACCCCAGCAGGGCACGGACCCACCTGGAGCTgggcataaatctgagaccgagttgttttaggttcaagtccagctctgagccagccagctgtcct-cagcagtgctcttgacccctctgccctt---c-agttcctcatttataacgtgggagtaatGGAAGCATATCTGAAGCATGAAGCCAGGGCCTCACCCGCTCTGAGCT--CTCTCAGGACGTTCCAGGCGTGTGAGG-GGAGAGAGCAGAGGCCTAGA-CCTGAGAGCCAATCCCATG-TTTCCCATCAAGAAGTTTCGACG-CCAATTCCAAGTCTGAGGAAAAAGGCAAGACTataattccgcagtaaagcggggacttcaataacacactttgattacggg-tagaacaagtaag-caaaagatcaacaaggaaatgtcaga--tgga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339271 486 - 9440265 CCCACACAGCAGCTTAGGAGTGGGTCCGTATTCCGAC----TACTTCGTCTCTGGTGTAA------TCATGACACTTTCTGGCTACCCCAGCAGGGCACGGACCCACCTGGAGCTgggcataaatctgagaccgagttgttttaggttcaagtccagctctgagccagccagctgtcct-cagcagtgctcttgacccctctgccctt---c-agttcctcatttataacgtgggagtaatGGAAGCATATCTGAAGCATGAAGCCAGGGCCTCACCCGCTCTGAGCT--CTCTCAGGACGTTCCAGGCGTGTGAGG-GGAGAGAGCAGAGGCCTAGA-CCTGAGAGCCAATCCCATG-TTTCCCATCAAGAAGTTTCGACG-CCAATTCCAAGTCTGAGGAAAAAGGCAAGACTataattccgcagtaaagcggggacttcaataacacactttgattacggg-tagaacaagtaag-caaaagatcaacaaggaaatgtcaga--tgga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930339 489 - 21915920 CCCACACAGCAGCTTAGGAGTGGGTCCGTATTCCGAC----TACTTCGTCTCTGGTGTAA------TCACGACACTTTCTGGCTACCCCAGCAGGGCACGGACCCACCTGGAGCTgggcataaatctgagaccgagttgtcttaggttcaagtccagctctgagccagccagctgtcct-cagcagtgctcttgacccctctgcccttcagc-agttcctcatttataacgtgggagtaatGGAAGCATATCTGAAGCATGAAGCCAGGGCCTCGCCTGCTCTGAGCT--CTCTCAGGACGTTCCAGGCGTGTAAGG-GGAGAGAGCAGAGGCCTAGA-CCTGAGAGCCAATCCCATG-TTTCCCATCAAGAAGTTTCGACG-CCAATTCCAAGTCTGAGGAAAAAGGCAAGACTacaattccgcagtaaatcagggacttcaataacacactttgattacggg-tagaacaagtaag-caaaagatcaacaaggaaatgtcaga--tgga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69178 486 - 21531802 CCCACACAGCAGCTTAGGAGTGGGTCCGTATTCCAAC----TACTTCGTCTCTGGTGTAA------TCATGACACCCTCTGGCTACCCCAGAAGGGCACGGACCCACCTGGAGTTgggcataaatctgagactgagctgtcttaagttcgagtccagctctgagccagccagctgtcct-cggcagtgctcttggcccctctgccctt---c-agttcctcatttataacgtgggagtaatGGAAGCATATCTGAAGCATGAAGTCAGGGCCTCGCCCGCTCTGAGCT--CTCTCAGGACGTTCCAGGCATGTGAGG-GGAGAGAGCAGAGGCCAAGA-CCTGAGAGCCAATCACATA-TTTCCCATCAAGAAGTTTCAACG-CCAATTCtaagtctgaggaaaaaggcaagactacaattccacaacaaatcggggacttcaataccacgctttgattacggg-tagaacaagtaag-caaaagatcaacaaggaaatgtcaga--tgga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 93366 486 - 2515279 CCCACATAGCAGCTTAGGAGTGGGTCCGTATTCCGAC----TACTTCGTCTCTGGTGTAA------TCAGGACACTTTCTGGCTACCCCAGCAGGGCACGGACCCACCTGGAGCTgggcataaatctgagaccgagttgtcttaggttcaagtccagctctgagccagccagctgtcct-cagcagtgctcttgacccctctgccctt---c-agttcctcatttataaggtgggagtaatGGAAGCATATCTGAAGCATGAAGCCAGGGCCTCGCCCGCTCTGAGCT--CTCTCAGGACGTTCCAGGCGTGTGAGG-GGAGAAAGCAGAGGCCTAGA-CCTGAGAGCCAATCCCATG-TTTCCCATCAAGAAGTTTCGACG-CCAATTCCAAGTCTGAGGAAAAAGGCAAGACTacaattccgcagtaaatcggggacttcaataacacactttgattacggg-tagaacaagtaag-caaaagatcaacaaggaaatgtcaga--tgga i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 250326 486 + 6586416 CCCACACAGCAGCTTAGGAGTGGGTCTGTATTCCGAC----TACTTCGTCTCTGGTGTAC------TCACGACACCCTCTGGCTACCCCAGGAGGGCATGGACCCACCTGGAGCTgggcataaatctgagaccaagttgtcttaggttcgagtccagctctgagccagccagctgtcct-cagcagtgctcttgacccctctgccctt---c-agtttctcatttataacgtggaagtaatGGAAGCATATCTGAAGCATGAAGCCAGGGCCTCGCCCGCTCTGAGCT--CTCTCAGGACATTCCAGGCGTGTGAGG-GGGGAGAGCAGAGGCCGAGA-CCTGAGAGCCAATCACACG-TTTCCCATCAAGAAGTTTCGACG-CCAATTCtaagcctgaggaaaaaggcaagactacaattctgcaataaatcgggcacttcaataacacactttcattatggg-tagaacaagtaag-caaaagatcaacaaggaaatgtcaga--tgga i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146625560 458 - 204313951 CCCACACAGCAGCTTAGGAATGGGTTTATATTCTGAC----TACTCCATCTCTGGTGTAA------TCACGGCACCCTCtggctaccccaggagggcatggaccaatcaggagctgggcataaatttgagatagagctgccttaggttacagtctagctctgagccagcca-----------gcagtgttcttgacccctctgccctt---c-agttcttcatttataaagtgggagtaatggaAGCACATCTGAAGCGTGAAGGCAGGCCTTCGCCTGCTCTGAGCT--CCCTCAGGATGTTTCAGGCACGTGATGCAGGGAGAGCAGAAACCAGGA-CCTGAGAGCCAATCACATG-TCTCCCGTCAAGAAGCTTAGGCT-CAGATTCTAagttggaggaaaaaagcaggactgcaattcagcaataaactggggacttcaatagc---------------------acaagtagg-caaaaggtcaatcaggaaatatcaga-ttgga i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 325554 477 - 2409723 CCCACACAGCAGCTCAGGAGTGGGTTTATATTCCGAT----TACTCCATCTCTGGTGTAA------TCATGATACCCTCtggctaccccgggagggcatggaccaaccaggagctgggcataaatttgagacggagctgccttaggttacagtatagctctgagtcagcca-----------acagtgttcttgacccctctgccctt---c-agttcttcatttgtaaggtgggaattatggaagcacATCTGAAGCATGAAGCCAGGCCTTTGCCTGCTCTGAGCT--CCCTCGAGATGTTTCAGGCATGTCATGCAGAGAGAGCAGAAGCCAGGA-CCTGAGAGCCAATCATGCG-TTTCCCATGAAGAAGCTTAGACT-CAGATTCTAAGTTGGAGGAAAaaggcaggactacaattcagcaataaa-tggggacttcaatagcacactttcgttgtggg-tagaacaagtagg-caaaaggtcaatcgggaaatgtgaga-ttgga i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 460877 478 - 2125214 CCCACACAGCAGCTTAGGAGTGGATTTATATTCCGAC----TACTCCATCTCTGGTGTAA------TCACGACACCCTCTGGCTACCCCAGGAGGGCATGGACCAACCGGGAGCTGGGCATAAATTTGAGACGGAGCTGCCTTAGGTTACAGTCTAGCTCTGAGCCAGCCA-----------GCAGTGTTcctgacccctctgctctt---c-agttcttcatttataaggtgggagtaatggaagcacATCTGAAGCATGAAGCCAGGCTTTCACCTGCTCTGAGCT--CCCTCAGGGTGTTTCAGGCATGTGATGCAGGGAGAGCGGAAGCCAGGA-CCTGAGAGCCAATCACATG-TTTCCCATCAAGAAGCTTAGACT-CAGATTCTAAGTTGGAGGAAAaaggcaggactacaattcagcaataaactggggacttcaatagcacacttttgttatgag-tagaacaagcatg-caaaaggtcaatcaggaaatgtcaga-ttgga i cebCap1.NW_016107703v1 I 122 I 1867 s canFam3.chr6 61001120 476 - 77573801 CTTACACAGCAGCTTAGGAACAGGCCAACATTCCGACTGAGTGCCTTAT-TCTGGTGTGGGAATGTTCATGACACCATCTAAGTACCGCAAGAGGACATCTAGAAATgtggtgctgagcacaaattctagactctagtgcctga-----aaatccagttctgaaccagccaggtgtcttggggcaatcttcccaggtcctctgtaggt---ctatttcctcacttacagagtacaaatactaggagcatatctaAAACATGAAGCCCA------ACGCATTATAAGCTTCCACTCAGTGGATGTCAGGTATCAGATG-G--GAGAAGAGAGGCCATTAGCTTGAGAGCAAAGTAAGTATTTTTCCATCAAGGAGCTCAGACA-TGGACTCTAAGTCTGATGAAAAAGGCACAA---------------ACACTGTGgacttcaatgacacactttcactgcaagacagaggaactggg-ccaaaggtcaacaaggaaatgcaggatttgga i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e nomLeu3.chr20 111980 127 + 85365473 I a score=81874.000000 s hg38.chr7_KI270899v1_alt 95197 24 + 190869 -----tcagt-------------tggccggcatctgcagagc s panTro5.chrUn_NW_015974889v1 14354 24 + 17818 -----tcaGT-------------TGGCCGGCATCTGCAGAGC i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 56520 24 - 432965 -----tcaGT-------------TGGCCGGCATCTGCAGAGC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33962197 24 + 185818997 -----acagt-------------ctgcccacatctgcagagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578536 24 + 192294377 -----acagt-------------ctgcccacatctgcagagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339757 24 - 9440265 -----acagt-------------ctgcccacatctgcagagc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930828 24 - 21915920 -----acagt-------------ctgcccacatctgcagagc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69664 24 - 21531802 -----acaGT-------------CTGCCCACATCTGCAGAGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 93852 24 - 2515279 -----acaGT-------------CTGCCCACATCTGCAGAGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 250812 13 + 6586416 -----acaGT-------------CTGCCCAT----------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146626018 19 - 204313951 -----accat-------------ctgcccacatctgc----- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 326031 19 - 2409723 -----accat-------------ctacccacatctgc----- i saiBol1.JH378296 C 0 C 0 s canFam3.chr6 61001596 42 - 77573801 acaacacggtaagtcgccttgagctgtgtgcatctgcagagc i canFam3.chr6 C 0 I 1039 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e nomLeu3.chr20 111980 127 + 85365473 I a score=9176.000000 s hg38.chr7_KI270899v1_alt 95221 3 + 190869 atg s panTro5.chrUn_NW_015974889v1 14378 3 + 17818 ATG i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 56544 3 - 432965 ATG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33962221 3 + 185818997 atg i rheMac8.chr3 C 0 I 2 s macFas5.chr3 33578560 3 + 192294377 atg i macFas5.chr3 C 0 I 2 s macNem1.NW_012019910v1 4339781 3 - 9440265 atg i macNem1.NW_012019910v1 C 0 I 2 s cerAty1.NW_012002954v1 16930852 3 - 21915920 atg i cerAty1.NW_012002954v1 C 0 I 2 s chlSab2.chr28 69688 3 - 21531802 ACG i chlSab2.chr28 C 0 I 23 s manLeu1.NW_012101810v1 93876 3 - 2515279 ATG i manLeu1.NW_012101810v1 C 0 I 2 e colAng1.NW_012117710v1 250825 0 + 6586416 C e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326050 0 - 2409723 C e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626037 0 - 204313951 C e nomLeu3.chr20 111980 127 + 85365473 I a score=32563.000000 s hg38.chr7_KI270899v1_alt 95224 8 + 190869 agagcacg s panTro5.chrUn_NW_015974889v1 14381 8 + 17818 AGAGCACG i panTro5.chrUn_NW_015974889v1 C 0 I 4 s gorGor5.CYUI01015914v1 56547 8 - 432965 AGAGCACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112107 8 + 85365473 AGAGCACA i nomLeu3.chr20 I 127 C 0 s rheMac8.chr3 33962226 8 + 185818997 ggcacaca i rheMac8.chr3 I 2 I 2 s macFas5.chr3 33578565 8 + 192294377 ggcacaca i macFas5.chr3 I 2 I 2 s macNem1.NW_012019910v1 4339786 8 - 9440265 ggcacaca i macNem1.NW_012019910v1 I 2 I 2 s cerAty1.NW_012002954v1 16930857 8 - 21915920 ggcgcaca i cerAty1.NW_012002954v1 I 2 I 2 s chlSab2.chr28 69714 8 - 21531802 AGAGCATG i chlSab2.chr28 I 23 I 4 s manLeu1.NW_012101810v1 93881 8 - 2515279 GGCGCACA i manLeu1.NW_012101810v1 I 2 C 0 s colAng1.NW_012117710v1 250825 7 + 6586416 -GAGCACG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146626037 8 - 204313951 agaacatg i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 326050 8 - 2409723 ggaacacg i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I a score=2910.000000 s hg38.chr7_KI270899v1_alt 95232 3 + 190869 cca s gorGor5.CYUI01015914v1 56555 3 - 432965 CCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112115 3 + 85365473 CCA i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146626045 3 - 204313951 cca i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 326058 3 - 2409723 cca i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 250832 0 + 6586416 C e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e chlSab2.chr28 69722 4 - 21531802 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e cerAty1.NW_012002954v1 16930865 2 - 21915920 I e macNem1.NW_012019910v1 4339794 2 - 9440265 I e macFas5.chr3 33578573 2 + 192294377 I e rheMac8.chr3 33962234 2 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e panTro5.chrUn_NW_015974889v1 14389 4 + 17818 I a score=54264.000000 s hg38.chr7_KI270899v1_alt 95235 16 + 190869 -ccagcaaccacagagc s panTro5.chrUn_NW_015974889v1 14393 13 + 17818 -CCAGCAACCACTT--- i panTro5.chrUn_NW_015974889v1 I 4 C 0 s gorGor5.CYUI01015914v1 56558 16 - 432965 -CCAGCAACCGCAGAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112118 16 + 85365473 -CCGGCAACTGCAAAGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962236 16 + 185818997 -ccagcaaccacagagc i rheMac8.chr3 I 2 C 0 s macFas5.chr3 33578575 16 + 192294377 -ccagcaaccacagagc i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 4339796 16 - 9440265 -ccagcaaccacagagc i macNem1.NW_012019910v1 I 2 C 0 s cerAty1.NW_012002954v1 16930867 16 - 21915920 -ccagcaaccgcagagc i cerAty1.NW_012002954v1 I 2 C 0 s chlSab2.chr28 69726 16 - 21531802 -CCAGCAACCGCAGAGC i chlSab2.chr28 I 4 C 0 s colAng1.NW_012117710v1 250832 5 + 6586416 ------------AGAGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146626048 17 - 204313951 cctggcaacagcagagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 326061 17 - 2409723 cctggcaacagcagagc i saiBol1.JH378296 C 0 I 1807 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I a score=4360.000000 s hg38.chr7_KI270899v1_alt 95251 4 + 190869 acgc s nomLeu3.chr20 112134 4 + 85365473 ATGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962252 4 + 185818997 acat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578591 4 + 192294377 aagt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339812 4 - 9440265 acgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930883 4 - 21915920 actc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69742 4 - 21531802 ACGT i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 250837 4 + 6586416 ACAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146626065 4 - 204313951 atac i calJac3.chr2 C 0 I 1801 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e panTro5.chrUn_NW_015974889v1 14406 0 + 17818 C e gorGor5.CYUI01015914v1 56574 0 - 432965 C a score=12250.000000 s hg38.chr7_KI270899v1_alt 95255 5 + 190869 caccc s nomLeu3.chr20 112138 5 + 85365473 CACCC i nomLeu3.chr20 C 0 T 45 s rheMac8.chr3 33962256 5 + 185818997 caccc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578595 5 + 192294377 caccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339816 5 - 9440265 caccc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930887 5 - 21915920 caccc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69746 5 - 21531802 CACCC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 250841 5 + 6586416 AACCC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14406 0 + 17818 C e gorGor5.CYUI01015914v1 56574 0 - 432965 C a score=39440.000000 s hg38.chr7_KI270899v1_alt 95260 15 + 190869 cgcaaccgcagagca s panTro5.chrUn_NW_015974889v1 14406 10 + 17818 -----CCGCAGAGCA i panTro5.chrUn_NW_015974889v1 C 0 C 0 s nomLeu3.chr20 112098 15 + 85365473 CGCAACCGCAGAGCA i nomLeu3.chr20 T 45 C 0 s rheMac8.chr3 33962261 15 + 185818997 agcaacagcagagca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578600 15 + 192294377 agcaacagcagagca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339821 15 - 9440265 agcaacagcagagca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930892 15 - 21915920 agcaaccgcagagca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69751 15 - 21531802 AGCAACGGCAGAGCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 250846 15 + 6586416 AGCAACGGCAGAGCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e gorGor5.CYUI01015914v1 56574 0 - 432965 C a score=37365.000000 s hg38.chr7_KI270899v1_alt 95275 18 + 190869 cTCCACCCAGCAACCGCA s panTro5.chrUn_NW_015974889v1 14416 18 + 17818 CTCCACCCAGCAACCGCA i panTro5.chrUn_NW_015974889v1 C 0 T 53 s gorGor5.CYUI01015914v1 56574 18 - 432965 CTCCACCCAGCAACCGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112113 11 + 85365473 -------CACCACCGGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962276 15 + 185818997 caTCACCCAGCAACC--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578615 15 + 192294377 caTCACCCAGCAACC--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339836 15 - 9440265 caTCACCCAGCAACC--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930907 18 - 21915920 cTCCACCCAGCAACCGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69766 18 - 21531802 CGTCACCCAGCAACCACA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 250861 18 + 6586416 TGTCACCCAGCAACCACA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=43315.000000 s hg38.chr7_KI270899v1_alt 95293 20 + 190869 TCCGCAGAGCACTCC--ACCCA s gorGor5.CYUI01015914v1 56592 22 - 432965 TCCGCAGAGCACTCCCAGCCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112124 20 + 85365473 ACTGCAAAGCATGCC--ACCCA i nomLeu3.chr20 C 0 T 45 s rheMac8.chr3 33962291 17 + 185818997 ---GCAGAGCGCTCC--ACCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578630 17 + 192294377 ---GCACAGCGCTCC--ACCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339851 17 - 9440265 ---GCAGAGCGCTCC--ACCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930925 20 - 21915920 CCTGCAGAGCACTCC--ACCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69784 20 - 21531802 ACCGCAGAGCACTCC--ACCCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 250879 20 + 6586416 ATTGCAGAGCACATC--ACCCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=32804.000000 s hg38.chr7_KI270899v1_alt 95313 15 + 190869 GCAA------CC----------GCA-GAGCAC s gorGor5.CYUI01015914v1 56614 26 - 432965 GCAA------CCCGCATCCGCAGCATGAGCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112099 15 + 85365473 GCAA------CC----------GCA-GAGCAC i nomLeu3.chr20 T 45 C 0 s rheMac8.chr3 33962308 15 + 185818997 GCAA------CT----------GCA-GAGCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578647 15 + 192294377 GCAA------CT----------GCA-GAGCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339868 15 - 9440265 GCAA------CT----------GCA-GAGCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930945 21 - 21915920 GCAACCGCACCT----------GCA-GAGCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69804 15 - 21531802 GCAA------CT----------GCA-GAGCAC i chlSab2.chr28 C 0 I 117 s colAng1.NW_012117710v1 250899 15 + 6586416 GCAA------TG----------GCA-GAGCAT i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=17086.000000 s hg38.chr7_KI270899v1_alt 95328 12 + 190869 TCCACCCAGCAA s gorGor5.CYUI01015914v1 56640 9 - 432965 TCCACCCA---A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112114 11 + 85365473 ACCACCGG-CAA i nomLeu3.chr20 C 0 I 46 s rheMac8.chr3 33962323 12 + 185818997 TCCACCCAGCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578662 12 + 192294377 TCCACCCAGCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339883 12 - 9440265 TCCACCCAGCAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930966 12 - 21915920 TCCACCCAACAA i cerAty1.NW_012002954v1 C 0 C 0 s colAng1.NW_012117710v1 250914 12 + 6586416 GTCACCCAGCAA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e chlSab2.chr28 69819 117 - 21531802 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=2844.000000 s hg38.chr7_KI270899v1_alt 95340 7 + 190869 CTGCATC s gorGor5.CYUI01015914v1 56649 7 - 432965 CCGCATC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112171 7 + 85365473 CCGCATC i nomLeu3.chr20 I 46 C 0 s rheMac8.chr3 33962335 7 + 185818997 CCGCACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578674 7 + 192294377 CCGCACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339895 7 - 9440265 CCGCACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16930978 1 - 21915920 C------ i cerAty1.NW_012002954v1 C 0 I 236 s colAng1.NW_012117710v1 250926 1 + 6586416 C------ i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e chlSab2.chr28 69819 117 - 21531802 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=37294.000000 s hg38.chr7_KI270899v1_alt 95347 13 + 190869 CGCAGAGCACTCC s gorGor5.CYUI01015914v1 56656 13 - 432965 CGCAGAGCACTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112178 13 + 85365473 TGCAGAGGACTAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962342 13 + 185818997 TGCAGAGCACTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578681 13 + 192294377 TGCAGAGCACTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339902 13 - 9440265 TGCAGAGCACTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931215 13 - 21915920 CGCAGAGCACTCC i cerAty1.NW_012002954v1 I 236 C 0 s chlSab2.chr28 69936 13 - 21531802 cacagagcactcc i chlSab2.chr28 I 117 C 0 s colAng1.NW_012117710v1 250927 13 + 6586416 CGCAGAGCGCTCC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 93889 0 - 2515279 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=50639.000000 s hg38.chr7_KI270899v1_alt 95360 19 + 190869 ACCCAGCAACC------ACAGAGCA s gorGor5.CYUI01015914v1 56669 11 - 432965 ACCCAGCAACC-------------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112191 25 + 85365473 ACCCAGCAACTGCATGCACAGAGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962355 19 + 185818997 ACCCAGCAACC------GCAGAGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578694 19 + 192294377 ACCCAGCAACC------GCAGAGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339915 19 - 9440265 ACCCACCAACC------GCGGAGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931228 19 - 21915920 ACCCAGCAACC------GCAGAGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69949 19 - 21531802 acccagcaacc------acagagca i chlSab2.chr28 C 0 T 97 s manLeu1.NW_012101810v1 93889 19 - 2515279 ACCCAGCAACC------GCAGAGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 250940 16 + 6586416 ACCCAG---CC------GCAGAGCG i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=12969.000000 s hg38.chr7_KI270899v1_alt 95379 19 + 190869 GTCCACCCAG-----------------------------CAACCGCAT s gorGor5.CYUI01015914v1 56680 3 - 432965 ---------------------------------------------CAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112216 19 + 85365473 CACCACCCAG-----------------------------CAACCGCAT i nomLeu3.chr20 C 0 T 110 s rheMac8.chr3 33962374 19 + 185818997 CTCCACCCAG-----------------------------CAACCGCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578713 19 + 192294377 CTCCACCCAG-----------------------------CAACCGCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339934 19 - 9440265 CTCCACCCAG-----------------------------CAACCGCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931247 15 - 21915920 CTCCACCCAA-----------------------------CAACC---- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69871 43 - 21531802 -GTCACCCAGCAACGGCAGAGCACATCACCCAGCAACCACAACC---- i chlSab2.chr28 T 97 C 0 s manLeu1.NW_012101810v1 93908 15 - 2515279 GGTCACCCAG-----------------------------CAACC---- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 250956 15 + 6586416 CTCCACCCAG-----------------------------CAACG---- i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=44862.000000 s hg38.chr7_KI270899v1_alt 95398 14 + 190869 CTGCAGAGCACTCC s gorGor5.CYUI01015914v1 56683 14 - 432965 CCGCAGAGCACTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112125 14 + 85365473 CTGCAAAGCATGCC i nomLeu3.chr20 T 110 C 0 s rheMac8.chr3 33962393 14 + 185818997 CTGCAAAGCACTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578732 14 + 192294377 CTGCAGAGCACTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339953 14 - 9440265 CTGCAGAGCACTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931262 12 - 21915920 --ACAGAGGACTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69914 12 - 21531802 --Gcagagcactcc i chlSab2.chr28 C 0 T 225 s manLeu1.NW_012101810v1 93923 12 - 2515279 --GCAGAGCACTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 250971 12 + 6586416 --GCAGAGCACTCC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=8595.000000 s hg38.chr7_KI270899v1_alt 95412 2 + 190869 AC s gorGor5.CYUI01015914v1 56697 2 - 432965 AC i gorGor5.CYUI01015914v1 C 0 T 28 s nomLeu3.chr20 112139 2 + 85365473 AC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962407 2 + 185818997 AC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578746 2 + 192294377 AC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339967 2 - 9440265 AC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931274 2 - 21915920 AC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69701 2 - 21531802 AC i chlSab2.chr28 T 225 C 0 s manLeu1.NW_012101810v1 93935 2 - 2515279 AC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 250983 2 + 6586416 AC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=162506.000000 s hg38.chr7_KI270899v1_alt 95414 61 + 190869 CCAGCAACC-----GCA----------------------------------------------------GAGCACTCCACCCAGCAACCGCATCTGCAGAGCACTCCACCC-AGCAACC s gorGor5.CYUI01015914v1 56671 67 - 432965 CCAGCAACCCATCCGCA----------------------------------------------------GAGCACTCCACCCAGCAACCACATCTGCAGAGCACTCCACCCCAGCAACC i gorGor5.CYUI01015914v1 T 28 I 113 s nomLeu3.chr20 112141 61 + 85365473 CCAGCAACT-----GCA----------------------------------------------------GAGCACGCCACCCAGCAACCGCATCTGCAGAGGACTACACCC-AGCAACT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962409 55 + 185818997 CCACCAACC-----GCA----------------------------------------------------GAGCACTCCACCCAGTAACT------GCAGAGAACTCCACCC-AACAACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578748 55 + 192294377 CCACCAACC-----GCA----------------------------------------------------GAGCACTCCACCCAGTAACT------GCAGAGAACTCCACCC-AACAACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4339969 107 - 9440265 CCACCAACC-----GCAGAGCACTCCACCCAGCAACCGCACCTGCAGAGCACTCCACCCACCAACCGCGGAGCACTCCACCCAGTAACA------GCAGAGAACTCCACCC-AACAACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931276 55 - 21915920 CCACCAACC-----GCA----------------------------------------------------GAGCACTCCACCCAACAACC------GCAGAGCACTCCACCC-AGCAACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69703 55 - 21531802 CCAGCAACG-----GCA----------------------------------------------------GAGCATGTCACCCAGCAACC------GCAGAGCACGTCACCC-AGCAACG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 93937 61 - 2515279 CCAGCAACC-----GCA----------------------------------------------------GAGCACTCCACCCAGCAACCGCACCTGCAGAGCACTCCACCC-ACCAACC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 250985 61 + 6586416 CCAGCAACC-----GCA----------------------------------------------------GAGCACTCCACCCAGCAACCGCACCTGCAGGGCACTCCACCC-AGCAACC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=-38297.000000 s hg38.chr7_KI270899v1_alt 95475 5 + 190869 --------------------------------------GCA------GA s gorGor5.CYUI01015914v1 56851 11 - 432965 --------------------------------------GCAtccacaga i gorGor5.CYUI01015914v1 I 113 C 0 s nomLeu3.chr20 112202 5 + 85365473 --------------------------------------GCATG------ i nomLeu3.chr20 C 0 I 151 s rheMac8.chr3 33962464 28 + 185818997 ACGGAGCACTCCACCCACCA------------ATGGCAGA--------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578803 5 + 192294377 ACG-----------------------------------GA--------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340076 28 - 9440265 GCGGAG------------CACTCCACCCACCAATGGCAGA--------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931331 28 - 21915920 GCAGGG------------CACTCCACCCAGCAACCACAGA--------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69758 5 - 21531802 GCA-----------------------------------GA--------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 93998 5 - 2515279 GCG-----------------------------------GA--------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 251046 5 + 6586416 ACA-----------------------------------GA--------- i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=46332.000000 s hg38.chr7_KI270899v1_alt 95480 12 + 190869 GCACTCCACCCA s gorGor5.CYUI01015914v1 56862 12 - 432965 gcactccaccca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112358 12 + 85365473 GCACTCCACCCA i nomLeu3.chr20 I 151 C 0 s rheMac8.chr3 33962492 12 + 185818997 GCACTCTACCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578808 12 + 192294377 GCACTCCACCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340104 12 - 9440265 GCACTCCACCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931359 12 - 21915920 GCACTCCACCCA i cerAty1.NW_012002954v1 C 0 I 6 s chlSab2.chr28 69763 12 - 21531802 GCACGTCACCCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 94003 12 - 2515279 GCACTCCACCCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 251051 12 + 6586416 GCCCTCCACCCA i colAng1.NW_012117710v1 C 0 I 98 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=16731.000000 s hg38.chr7_KI270899v1_alt 95492 7 + 190869 GCAACCA s gorGor5.CYUI01015914v1 56874 7 - 432965 gcaaccc i gorGor5.CYUI01015914v1 C 0 I 2 s nomLeu3.chr20 112370 7 + 85365473 GCAACCA i nomLeu3.chr20 C 0 I 6 s rheMac8.chr3 33962504 7 + 185818997 GTAACCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578820 7 + 192294377 CCAATGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340116 7 - 9440265 GTAACCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931377 7 - 21915920 GCAACCG i cerAty1.NW_012002954v1 I 6 C 0 s chlSab2.chr28 69775 7 - 21531802 GCAACCA i chlSab2.chr28 C 0 I 231 s manLeu1.NW_012101810v1 94015 7 - 2515279 CTAACCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 251161 7 + 6586416 GCAACCG i colAng1.NW_012117710v1 I 98 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=43056.000000 s hg38.chr7_KI270899v1_alt 95499 12 + 190869 CAGAGCAGTCCA s gorGor5.CYUI01015914v1 56883 12 - 432965 cagagcactcca i gorGor5.CYUI01015914v1 I 2 T 196 s nomLeu3.chr20 112383 12 + 85365473 CAGAGCACTACA i nomLeu3.chr20 I 6 C 0 s rheMac8.chr3 33962511 12 + 185818997 CAGAGCACTCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578827 12 + 192294377 CAGAGCACTCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340123 12 - 9440265 CAGAGCACTCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931384 12 - 21915920 CAGAGCACTCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70013 12 - 21531802 CAGAGCCCTCCA i chlSab2.chr28 I 231 C 0 s manLeu1.NW_012101810v1 94022 12 - 2515279 CGGAGCACTCCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 251168 12 + 6586416 CAGACCACTCCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=2552.000000 s hg38.chr7_KI270899v1_alt 95511 1 + 190869 T s nomLeu3.chr20 112395 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962523 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578839 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340135 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931396 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70025 1 - 21531802 C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 94034 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 251180 1 + 6586416 C i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T e gorGor5.CYUI01015914v1 56895 196 - 432965 T a score=27460.000000 s hg38.chr7_KI270899v1_alt 95512 8 + 190869 CCA------GCAAC s gorGor5.CYUI01015914v1 56699 8 - 432965 CCA------GCAAC i gorGor5.CYUI01015914v1 T 196 C 0 s nomLeu3.chr20 112396 8 + 85365473 CCA------GCAAC i nomLeu3.chr20 C 0 T 306 s rheMac8.chr3 33962524 8 + 185818997 CCA------GCAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578840 8 + 192294377 CCA------GTAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340136 8 - 9440265 CCA------GCAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931397 8 - 21915920 CCA------GCAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70026 14 - 21531802 CCAGCAACCGCAAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 94035 8 - 2515279 CCA------GTAAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 251181 8 + 6586416 CCA------GCAAC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=-12115.000000 s hg38.chr7_KI270899v1_alt 95520 7 + 190869 CGCATC------T s gorGor5.CYUI01015914v1 56707 7 - 432965 CACATC------T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112098 7 + 85365473 CGCAAC------C i nomLeu3.chr20 T 306 C 0 s rheMac8.chr3 33962532 1 + 185818997 -----C------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578848 1 + 192294377 -----C------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340144 1 - 9440265 -----C------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931405 1 - 21915920 -----C------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70040 1 - 21531802 -----C------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 94043 1 - 2515279 -----C------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 251189 7 + 6586416 -----CGCACCT- i colAng1.NW_012117710v1 C 0 T 268 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=56417.000000 s hg38.chr7_KI270899v1_alt 95527 18 + 190869 GCAGAGCACTCCACCC-AG s gorGor5.CYUI01015914v1 56714 19 - 432965 GCAGAGCACTCCACCCCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112105 17 + 85365473 GCAGAGCACACCACC--GG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962533 18 + 185818997 ACGGAGCACTCCACCC-AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578849 18 + 192294377 GCAGAGCACTCCACCC-AG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340145 18 - 9440265 ACGGAGCACTCCACCC-AA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931406 18 - 21915920 GCAGAGCACTCCACCC-AG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70041 18 - 21531802 GCAGAGCACTCCACCA-AG i chlSab2.chr28 C 0 T 277 s manLeu1.NW_012101810v1 94044 18 - 2515279 GCAGAGAACTCCACCC-AG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 250928 18 + 6586416 GCAGAGCGCTCCACCC-AG i colAng1.NW_012117710v1 T 268 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=23919.000000 s hg38.chr7_KI270899v1_alt 95545 9 + 190869 CAACC-------GCAG s gorGor5.CYUI01015914v1 56733 16 - 432965 CAACCACCATCCGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112122 9 + 85365473 CAACT-------GCAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962551 9 + 185818997 CAACC-------GCGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578867 9 + 192294377 CAACC-------ACGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340163 9 - 9440265 CAACC-------GCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931424 9 - 21915920 CAACC-------GCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69782 9 - 21531802 CAACC-------GCAG i chlSab2.chr28 T 277 C 0 s manLeu1.NW_012101810v1 94062 9 - 2515279 TAACC-------GCAG i manLeu1.NW_012101810v1 C 0 M 975 s colAng1.NW_012117710v1 250946 6 + 6586416 ---CC-------GCAG i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=67565.000000 s hg38.chr7_KI270899v1_alt 95554 27 + 190869 AGCACTCCACCCAGCAACCG-----------------------------CAGAGCA s gorGor5.CYUI01015914v1 56749 27 - 432965 AGCACTCCACCCAGCAACCG-----------------------------CAGAGCA i gorGor5.CYUI01015914v1 C 0 T 202 s nomLeu3.chr20 112131 27 + 85365473 AGCATGCCACCCAGCAACTG-----------------------------CAGAGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962560 33 + 185818997 AGCACTCCACCCAACAACCG-----------------------AAACCACAGAGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578876 27 + 192294377 AGCACTCCACCCAACAACCG-----------------------------CGGAGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340172 33 - 9440265 AGCACTCCACCCAACAACCG-----------------------AAACCACAGAGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931433 56 - 21915920 AGCACTCCACCCAACAACCGTGGAGCACTCCACCCAACAACCGCAACCGCAGAGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69791 27 - 21531802 AGCACTCCACCCAGCAACTG-----------------------------CAGAGCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 250952 27 + 6586416 AGCGCTCCACCCAGCAACGG-----------------------------CAGAGCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=46858.000000 s hg38.chr7_KI270899v1_alt 95581 18 + 190869 CTCCACCCAGCAACCG------CA s gorGor5.CYUI01015914v1 56574 18 - 432965 CTCCACCCAGCAACCG------CA i gorGor5.CYUI01015914v1 T 202 C 0 s nomLeu3.chr20 112158 18 + 85365473 CGCCACCCAGCAACCG------CA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962593 18 + 185818997 CCCCACCCAACAACCG------CA i rheMac8.chr3 C 0 I 17 s macFas5.chr3 33578903 24 + 192294377 CTCCACCCAACAACCGAAACCACA i macFas5.chr3 C 0 I 17 s macNem1.NW_012019910v1 4340205 18 - 9440265 CCCCACCCAACAACCG------CA i macNem1.NW_012019910v1 C 0 I 17 s cerAty1.NW_012002954v1 16931489 18 - 21915920 CTCCACCCAGCAACCG------CA i cerAty1.NW_012002954v1 C 0 I 17 s chlSab2.chr28 69818 16 - 21531802 CTCCACCCAGCAACCA-------- i chlSab2.chr28 C 0 I 2 s colAng1.NW_012117710v1 250979 18 + 6586416 CTCCACCCAGCAACCG------CA i colAng1.NW_012117710v1 C 0 I 66 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=22509.000000 s hg38.chr7_KI270899v1_alt 95599 11 + 190869 TCCGCAGAGCA s gorGor5.CYUI01015914v1 56592 11 - 432965 TCCGCAGAGCA i gorGor5.CYUI01015914v1 C 0 T 29 s nomLeu3.chr20 112176 11 + 85365473 TCTGCAGAGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962628 11 + 185818997 ACCGCAGAGCA i rheMac8.chr3 I 17 C 0 s macFas5.chr3 33578944 11 + 192294377 ACCGCAGAGCA i macFas5.chr3 I 17 C 0 s macNem1.NW_012019910v1 4340240 11 - 9440265 ACTGCAGAGCA i macNem1.NW_012019910v1 I 17 C 0 s cerAty1.NW_012002954v1 16931524 11 - 21915920 ACCACAGAGCA i cerAty1.NW_012002954v1 I 17 C 0 s chlSab2.chr28 69836 11 - 21531802 ACCGCAGAGCA i chlSab2.chr28 I 2 C 0 e colAng1.NW_012117710v1 250997 66 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=21245.000000 s hg38.chr7_KI270899v1_alt 95610 15 + 190869 CTCCACCCAGCAACC s gorGor5.CYUI01015914v1 56574 15 - 432965 CTCCACCCAGCAACC i gorGor5.CYUI01015914v1 T 29 C 0 s nomLeu3.chr20 112187 15 + 85365473 CTACACCCAGCAACT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962639 13 + 185818997 CTCCACCCAGCAA-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578955 13 + 192294377 CTCCACCCAGTAA-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340251 13 - 9440265 CTCCACCCGGCAA-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931535 13 - 21915920 CTCCACCCAACAA-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69847 13 - 21531802 TGTCACCCAGCAA-- i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 250997 66 + 6586416 I e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=28024.000000 s hg38.chr7_KI270899v1_alt 95625 14 + 190869 GCATCCGCAGAGCA s gorGor5.CYUI01015914v1 56589 14 - 432965 GCATCCGCAGAGCA i gorGor5.CYUI01015914v1 C 0 T 29 s nomLeu3.chr20 112202 14 + 85365473 GCATGCACAGAGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962652 10 + 185818997 ----CCGCAGAGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578968 10 + 192294377 ----CCGCAGAGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340264 10 - 9440265 ----CCGCAGAGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931548 10 - 21915920 ----CCGCGGAGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69860 10 - 21531802 ----CGGCAGAGCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251063 14 + 6586416 GCACCTGCAGAGCA i colAng1.NW_012117710v1 I 66 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=93048.000000 s hg38.chr7_KI270899v1_alt 95639 43 + 190869 CTCCACCCAGCAACCGCATCCGCAGAGCACTCC--ACCCAGCAAC s gorGor5.CYUI01015914v1 56574 45 - 432965 CTCCACCCAGCAACCGCATCCGCAGAGCACTCCCAGCCCAGCAAC i gorGor5.CYUI01015914v1 T 29 C 0 s nomLeu3.chr20 112216 43 + 85365473 CACCACCCAGCAACCGCATCTGCAGAGCACTAC--ACCCAGCAAC i nomLeu3.chr20 C 0 T 161 s rheMac8.chr3 33962662 43 + 185818997 CTCCACCCATCAACCGCAACCGCCGAGCACTCC--ACCCAACAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33578978 37 + 192294377 CTCCACCCG------GCAACCGCAGAGCACTCC--ACCCATCAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340274 43 - 9440265 CTCCACCCATCAACCGCAACCGCCGAGCACTCC--ACCCAACAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931558 43 - 21915920 CTACACCCAACAACCGCAACCGCAGAGCACCCC--ACCCACCAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69870 37 - 21531802 CGTCACCCA------GCAACGGCAGAGCACATC--ACCCAGCAAC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251077 37 + 6586416 CTCCACCCA------GCAACCGCAGAGCCCTCC--ACCCAGCAAC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=7551.000000 s hg38.chr7_KI270899v1_alt 95682 4 + 190869 C-GCA s gorGor5.CYUI01015914v1 56619 5 - 432965 CCGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112098 4 + 85365473 -CGCA i nomLeu3.chr20 T 161 C 0 s rheMac8.chr3 33962705 4 + 185818997 -CGCA i rheMac8.chr3 C 0 I 18 s macFas5.chr3 33579015 4 + 192294377 -CGCA i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4340317 4 - 9440265 -CGCA i macNem1.NW_012019910v1 C 0 I 18 s cerAty1.NW_012002954v1 16931601 4 - 21915920 -CGCA i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 69907 4 - 21531802 -CACA i chlSab2.chr28 C 0 I 1 s colAng1.NW_012117710v1 251114 4 + 6586416 -TGCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=-331.000000 s hg38.chr7_KI270899v1_alt 95686 1 + 190869 T s gorGor5.CYUI01015914v1 56624 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112102 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 251118 1 + 6586416 C i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e chlSab2.chr28 69911 1 - 21531802 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e cerAty1.NW_012002954v1 16931605 1 - 21915920 I e macNem1.NW_012019910v1 4340321 18 - 9440265 I e macFas5.chr3 33579019 1 + 192294377 I e rheMac8.chr3 33962709 18 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=50880.000000 s hg38.chr7_KI270899v1_alt 95687 19 + 190869 CCGCAG----AGCACTCCACCCA s gorGor5.CYUI01015914v1 56625 23 - 432965 CCGCAGCATGAGCACTCCACCCA i gorGor5.CYUI01015914v1 C 0 I 26 s nomLeu3.chr20 112103 18 + 85365473 CCGCAG----AGCACACCACCG- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962727 19 + 185818997 CCGTAG----AGCACTCCACCCA i rheMac8.chr3 I 18 C 0 s macFas5.chr3 33579020 19 + 192294377 CCGCCG----AGCACTCCACCCA i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4340339 19 - 9440265 CCGCAG----AGCACTCCACCCA i macNem1.NW_012019910v1 I 18 C 0 s cerAty1.NW_012002954v1 16931606 19 - 21915920 CCGCAG----AGCACTCCACCCA i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 69912 19 - 21531802 CCGcag----agcactccaccca i chlSab2.chr28 I 1 C 0 s colAng1.NW_012117710v1 251119 19 + 6586416 CTGCAG----AGCACTCCACCCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=14250.000000 s hg38.chr7_KI270899v1_alt 95706 7 + 190869 GCAACCG s gorGor5.CYUI01015914v1 56674 6 - 432965 GCAACC- i gorGor5.CYUI01015914v1 I 26 C 0 s nomLeu3.chr20 112121 7 + 85365473 GCAACTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962746 7 + 185818997 ACAACCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579039 7 + 192294377 ACAACCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340358 7 - 9440265 GTAACCG i macNem1.NW_012019910v1 C 0 I 115 s cerAty1.NW_012002954v1 16931625 7 - 21915920 ACAACCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69931 7 - 21531802 gcaacca i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251138 7 + 6586416 GCAACCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T a score=37217.000000 s hg38.chr7_KI270899v1_alt 95713 24 + 190869 CAGAGCACTCCACCCAGCAACCGC s nomLeu3.chr20 112128 24 + 85365473 CAAAGCATGCCACCCAGCAACTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962753 24 + 185818997 CAGAGCACTCCACCCAGCAACCGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579046 24 + 192294377 CAGAGCACTGCACCCAGCAACCGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340480 24 - 9440265 CAGAGCACTGCACCCAGCAACCGC i macNem1.NW_012019910v1 I 115 C 0 s cerAty1.NW_012002954v1 16931632 24 - 21915920 CAGAGCACTCCACCCAACAACCGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69938 1 - 21531802 -----------------------c i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251145 24 + 6586416 CAGAGCACTCCACCCAGCAACCGC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14434 53 + 17818 T e gorGor5.CYUI01015914v1 56680 0 - 432965 C a score=44483.000000 s hg38.chr7_KI270899v1_alt 95737 29 + 190869 AGAGCACTCCACCCAGCAACC------GCATCCGC s panTro5.chrUn_NW_015974889v1 14381 29 + 17818 AGAGCACGCCATCCAGCAACC------ACTTCCGC i panTro5.chrUn_NW_015974889v1 T 53 T 29 s gorGor5.CYUI01015914v1 56680 7 - 432965 ----------------------------CATCCGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112152 29 + 85365473 AGAGCACGCCACCCAGCAACC------GCATCTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962777 23 + 185818997 AGGGCACTCCACCCAGCAACC------AC------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579070 23 + 192294377 AGAGCACTCCACCCAACAACC------GC------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340504 23 - 9440265 AGAGCACTCCACCCAACAACC------AC------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931656 23 - 21915920 AGAGCACTCCACCCAGCAACC------GC------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69939 23 - 21531802 agagcactccacccagcaacc------ac------ i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251169 29 + 6586416 AGACCACTCCACCCAGCAACCGCACCTGC------ i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=34376.000000 s hg38.chr7_KI270899v1_alt 95766 18 + 190869 AGAGCACTCCACCCAG----------------------------------------------CA s panTro5.chrUn_NW_015974889v1 14381 18 + 17818 AGAGCACGCCATCCAG----------------------------------------------CA i panTro5.chrUn_NW_015974889v1 T 29 C 0 s gorGor5.CYUI01015914v1 56687 18 - 432965 AGAGCACTCCACCCAG----------------------------------------------CA i gorGor5.CYUI01015914v1 C 0 T 57 s nomLeu3.chr20 112181 18 + 85365473 AGAGGACTACACCCAG----------------------------------------------CA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962800 18 + 185818997 AGAGCACTCCACCCAA----------------------------------------------CA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579093 64 + 192294377 AGAGCACTCCACCCAGCAACCGCAGGGCACTCCACCCAGCAACCACAGAGCACTCCACCCAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340527 18 - 9440265 AGAGCACTCCACCCAG----------------------------------------------CA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931679 16 - 21915920 AGACCACTCCACCCAA------------------------------------------------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69962 18 - 21531802 agagcactccacCCAG----------------------------------------------CA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251198 16 + 6586416 AGAGCACTCCACNNNN------------------------------------------------ i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=32251.000000 s hg38.chr7_KI270899v1_alt 95784 19 + 190869 ACCGCATCCGCA----------------------------------------------GAGCACT s panTro5.chrUn_NW_015974889v1 14399 19 + 17818 ACCACTTCCGCA----------------------------------------------GAGCACT i panTro5.chrUn_NW_015974889v1 C 0 T 29 s gorGor5.CYUI01015914v1 56648 19 - 432965 ACCGCATCCGCA----------------------------------------------GAGCACT i gorGor5.CYUI01015914v1 T 57 C 0 s nomLeu3.chr20 112199 19 + 85365473 ACTGCATGCACA----------------------------------------------GAGCACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962818 19 + 185818997 ACCGCAACCGCA----------------------------------------------GAGCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579157 19 + 192294377 ACCGCAACCGCA----------------------------------------------GAGCACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340545 19 - 9440265 AACACAACCGCA----------------------------------------------GAGCACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931695 15 - 21915920 ----CAACCGCA----------------------------------------------GAGCACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69980 19 - 21531802 ACCGCAACCGCA----------------------------------------------GAGCACG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251214 53 + 6586416 ------------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCACT i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=61194.000000 s hg38.chr7_KI270899v1_alt 95803 40 + 190869 CCACCCA------GCAACCGCATCCGCAGAGCACTCCACCCA----GCAA s panTro5.chrUn_NW_015974889v1 14389 40 + 17818 CCATCCA------GCAACCACTTCCGCAGAGCACTCCACCCA----GCAA i panTro5.chrUn_NW_015974889v1 T 29 C 0 s gorGor5.CYUI01015914v1 56667 39 - 432965 CCACCCA------GCAACC-CATCCGCAGAGCACTCCACCCA----GCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112218 40 + 85365473 CCACCCA------GCAACCGCATCTGCAGAGCACTACACCCA----GCAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962837 30 + 185818997 CCACCCA------GCAACC------GCAGAGCACTCCACCCA-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579176 30 + 192294377 CCACCCA------GCAACC------GCAGAGCACTCCACCCA-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340564 30 - 9440265 CCACCCA------ACAACC------GCAGAGCACTCCACCCA-------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931710 36 - 21915920 CCACCCAACAACCACAACC------GCAGAGCACTCCACCCA-------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 69999 34 - 21531802 TCACCCA------GAAACC------ACAGAGCCCTCCACCCAGCAA---- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251267 11 + 6586416 CCACCCA------GCAA--------------------------------- i colAng1.NW_012117710v1 C 0 T 90 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=59303.000000 s hg38.chr7_KI270899v1_alt 95843 35 + 190869 CCGCATCCGCAGAGCACTCCA-CCCA------GCAACCG-CAT s panTro5.chrUn_NW_015974889v1 14429 35 + 17818 CCGCATCCGCAGAGCACTCCA-CCCA------GCAACCG-CAT i panTro5.chrUn_NW_015974889v1 C 0 T 83 s gorGor5.CYUI01015914v1 56706 37 - 432965 CCACATCTGCAGAGCACTCCACCCCA------GCAACCACCAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112258 35 + 85365473 CTGCATGCACAGAGCACTCCA-CCCA------GCAACCG-CAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962867 27 + 185818997 --ACAACCGCAGAGCACTCCA-CCCA------ACAA------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579206 27 + 192294377 --ACAACCGCAGAGCACTCCA-CCCA------ACAA------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340594 27 - 9440265 --GCAACCGCAGAGCACTCCA-CCCA------GCAA------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931746 33 - 21915920 --CCAACCGCAGAGCACTCCA-CCCAGTAACCGCAA------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70033 29 - 21531802 CCGCAACCGCAGAGCACTCCA-CCAA------GCAA------- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251188 25 + 6586416 CCGCACCTGCAGAGCACTCCA-CNNN----------------- i colAng1.NW_012117710v1 T 90 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=9366.000000 s hg38.chr7_KI270899v1_alt 95878 4 + 190869 CCGC s gorGor5.CYUI01015914v1 56743 4 - 432965 CCGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112293 4 + 85365473 CCGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962894 4 + 185818997 CCGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579233 4 + 192294377 CCGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340621 4 - 9440265 CCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931779 4 - 21915920 CTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70062 4 - 21531802 CCGC i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 251213 0 + 6586416 C e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14464 83 + 17818 T a score=57468.000000 s hg38.chr7_KI270899v1_alt 95882 29 + 190869 A-----------------------------------------------GAGCACTCCACCCAGCAACCGCATCCGC s panTro5.chrUn_NW_015974889v1 14381 29 + 17818 A-----------------------------------------------GAGCACGCCATCCAGCAACCACTTCCGC i panTro5.chrUn_NW_015974889v1 T 83 I 63 s gorGor5.CYUI01015914v1 56747 24 - 432965 A-----------------------------------------------GAGCACTCCACCCAGCAACCGCA----- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112297 29 + 85365473 A-----------------------------------------------GAGCACTCTACCCAGCAACCGCATCTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962898 29 + 185818997 G-----------------------------------------------GAGCACTCCACCCAACAACCGCAACCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579237 29 + 192294377 G-----------------------------------------------GAGCACTCCACCCAACAACCGCAACCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340625 29 - 9440265 A-----------------------------------------------GAGCACTCCACCCAACAACCGCAACCGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931783 23 - 21915920 A-----------------------------------------------GAACACTCCACCCAACAACCG------C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70066 23 - 21531802 A-----------------------------------------------GAGCACTCCACCCAGCAACCA------C i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251213 69 + 6586416 -NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCACTCCACCCAGCAACCA------C i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=12784.000000 s hg38.chr7_KI270899v1_alt 95911 4 + 190869 AGAG s gorGor5.CYUI01015914v1 56771 3 - 432965 -GAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112326 4 + 85365473 AGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962927 4 + 185818997 AGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579266 4 + 192294377 AGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340654 4 - 9440265 AGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931806 4 - 21915920 AGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70089 4 - 21531802 AGAG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251282 4 + 6586416 AGAG i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14410 63 + 17818 I a score=158539.000000 s hg38.chr7_KI270899v1_alt 95915 79 + 190869 CACTCCA-CCCAGCAACC-GCAT-CCGCAGAGCACT-CCACCCAGCAACCGCATCCGCAGAGCACTCCACCCAGCA-ACCGCAT s panTro5.chrUn_NW_015974889v1 14473 70 + 17818 CACTCCA-CCCAGCAACGAGTATCCCACAGAGCACT-CCA-CCAGCAG--GCA-CCGCAG----CT----CCAGCAGACCGCAT i panTro5.chrUn_NW_015974889v1 I 63 C 0 s gorGor5.CYUI01015914v1 56774 81 - 432965 CACTCCA-CCCAGCAACCGGCAT-CCGCAGAGCGCTCCCACCCAGCAACCGCATCCGCAGAGCACTCCACCCAGCA-ACCGCAt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112330 79 + 85365473 CACTACA-CCCAGCAACT-GCAT-GCACAGAGCACT-CCACCCAGCAACCACATCTGCAGAGCACTACACCCAGCA-ACCGCAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33962931 74 + 185818997 CACTCCACCCCACCAA--------CCACAGAGCACT-CCACCCAGTAACCGCAACCACAGAGCACTCCATCCAACG-ACTGCAG i rheMac8.chr3 C 0 I 17 s macFas5.chr3 33579270 73 + 192294377 CACTCCA-CCCACCAA--------CCACAGAGCACT-CCACCCAGTAACCGCAACCACAGAGCACTCCATCCAACG-ACTGCAG i macFas5.chr3 C 0 I 17 s macNem1.NW_012019910v1 4340658 73 - 9440265 CACTCCA-CCCAGCAA--------CCGCAGAGCACT-CCACCCAACAACCGCAACCGCAGAGCACTCCACCCAGCA-ACCGCAG i macNem1.NW_012019910v1 C 0 I 17 s cerAty1.NW_012002954v1 16931810 73 - 21915920 CATGTCA-CCCAGCAA--------CCGCAGAGTACT-CCACCCAGCAACCACATCTGCAGAGCATTCCACCCAACA-ACCGCGG i cerAty1.NW_012002954v1 C 0 I 17 s chlSab2.chr28 70093 69 - 21531802 CACTCCA-CCCAGCAA--------CCACAGAGCCCT-CCACCCAGCAACCGCAACCACAGAGCACTCCACCCAGCA-ACC---- i chlSab2.chr28 C 0 I 4 s colAng1.NW_012117710v1 251286 44 + 6586416 CACTCCA-CCCAGCAA--------CCGCAGACCACT-CCACCCAGCAACCGCAC------------------------------ i colAng1.NW_012117710v1 C 0 T 52 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=9000.000000 s hg38.chr7_KI270899v1_alt 95994 2 + 190869 CC s panTro5.chrUn_NW_015974889v1 14543 2 + 17818 CC i panTro5.chrUn_NW_015974889v1 C 0 I 12 s gorGor5.CYUI01015914v1 56855 2 - 432965 cc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112409 2 + 85365473 CC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33963022 2 + 185818997 CC i rheMac8.chr3 I 17 C 0 s macFas5.chr3 33579360 2 + 192294377 CC i macFas5.chr3 I 17 C 0 s macNem1.NW_012019910v1 4340748 2 - 9440265 CC i macNem1.NW_012019910v1 I 17 C 0 s cerAty1.NW_012002954v1 16931900 2 - 21915920 CC i cerAty1.NW_012002954v1 I 17 C 0 s chlSab2.chr28 70166 2 - 21531802 CC i chlSab2.chr28 I 4 C 0 s colAng1.NW_012117710v1 251278 2 + 6586416 CC i colAng1.NW_012117710v1 T 52 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=42564.000000 s hg38.chr7_KI270899v1_alt 95996 14 + 190869 GCAGAGCACTCCAC s gorGor5.CYUI01015914v1 56857 14 - 432965 acagagcactccac i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112411 14 + 85365473 ACAGAGCACTCCAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33963024 14 + 185818997 GCAGAGTACTCCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579362 14 + 192294377 GCAGAGTACTCCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340750 14 - 9440265 GCGGAGCACTCCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931902 14 - 21915920 GCGGAGCACTCCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70168 14 - 21531802 ACAGAGCACTCCAC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251280 14 + 6586416 ACAGAGCACTCCAC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14545 12 + 17818 I a score=36927.000000 s hg38.chr7_KI270899v1_alt 96010 9 + 190869 CCAGCAACC s panTro5.chrUn_NW_015974889v1 14557 9 + 17818 CCAGCAACC i panTro5.chrUn_NW_015974889v1 I 12 C 0 s gorGor5.CYUI01015914v1 56871 9 - 432965 ccagcaacc i gorGor5.CYUI01015914v1 C 0 I 3 s nomLeu3.chr20 112425 9 + 85365473 CCAGCAACT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33963038 9 + 185818997 CCAGCAACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579376 9 + 192294377 CCAGCAACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340764 9 - 9440265 CCAACAACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931916 9 - 21915920 CCAGCAACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70182 9 - 21531802 CCAGCAACC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251294 9 + 6586416 CCAGCAACC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=1290.000000 s hg38.chr7_KI270899v1_alt 96019 7 + 190869 GCATCCG s panTro5.chrUn_NW_015974889v1 14566 2 + 17818 G-----A i panTro5.chrUn_NW_015974889v1 C 0 C 0 s nomLeu3.chr20 112434 7 + 85365473 GCATCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33963047 7 + 185818997 ACATCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579385 7 + 192294377 ACATCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340773 7 - 9440265 GCAACCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931925 1 - 21915920 ------G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70191 7 - 21531802 GCATCCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251303 1 + 6586416 ------G i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e gorGor5.CYUI01015914v1 56880 3 - 432965 I a score=305110.000000 s hg38.chr7_KI270899v1_alt 96026 141 + 190869 CAGAGCACTCCACCCAGCAACCGCATCCGCAGAGCACTCCACCCAGCA-AC--CGCATCCGCAGAGCACTCCACCCAGCAACCGCATCCGCAGAGCACTCCAC-----------------------CCAGCA-ACC-----------------GCATCC------GCAGAGCACTCCACCCAGCAACCGCA s panTro5.chrUn_NW_015974889v1 14568 124 + 17818 CAGAGCACTCCACCCAGCAACCGC-TCTGCAGAGCACTCCACCCAGCAGACCGCGCATCTGCG--------CACCCAGCA--------CGCAGA--ACTCCAC-----------------------ACTGCAGACG-----------------GCATCT------GCAGAG-ACTCCACCCAGC-ACGGCA i panTro5.chrUn_NW_015974889v1 C 0 I 1 s gorGor5.CYUI01015914v1 56883 128 - 432965 cagagcactcca-ccagCAACCGCATCCGCAGAGCACTCCACCCAGCA-AC--------CGCAGAGCGCTCCACCCAGCAACCGCATCCGCAGAGCACTCCAC-----------------------CCAGCA------------------------TCT------GCAGAGCACTCCACCCAGCAACCGCA i gorGor5.CYUI01015914v1 I 3 C 0 s nomLeu3.chr20 112441 141 + 85365473 CAGAGCACTACATCCAGCAACCGCATCCGCAGAGCACTCTACCCAGCA-AC--CGCATCTGCAGAGCACTCTACCCAGCAACTGCATCTGCAGAGCACTCTAC-----------------------CCAGCA-ACT-----------------Gcatct------gcagagcactacacccagcaactgca i nomLeu3.chr20 C 0 T 29 s rheMac8.chr3 33963054 141 + 185818997 CAGAGCACTCCACCCA------ACAACCGCGGAGCACTCCACCCAGCA-AC--------CACAGAGCACTCCACCCAGCAACTGCACCTGAAGAGCACTCCAT-----------------------GCAGCA-ACTGCAGAGCACTCCACCCAGCAATA------GCAGAGCACTCCATCCGGCAA----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579392 141 + 192294377 CAGAGCACTCCACCCA------ACAACCGCGGAGCACTCCACCCAGCA-AC--------CACAGAGCACTCCACCCAGCAACTGCACCTGAAGAGCACTCCAT-----------------------GCAGCA-ACTGCAGAGCACTCCACCCAGCAACA------GCAGAGCACTCCATCCGGCAA----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340780 170 - 9440265 CAGAGCACTCCACCCA------CCAACCACAGAGCACTCCACCCACCA-AC--------CACAGAGCACTCCACCCAGTAACCGCAACCACAGAGCACTCCATCCAACGACTGCAGAGCATGTCACCCAGCA-ACCGCAGAGTACTCCACCCAGCAACCACATCTGCAGAGCACTCCACCCAACAA----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16931926 130 - 21915920 CAGAGCACTCCACCCAGCAACTGCAACTGCAGAGCACTCCACGCAGCA-AC--------CGCAGAGCACTCCACCCACCAACTGCAACTGCAGAGCACTCCAC-----------------------CCAGCA-ACC-----------------GCAACT------GCAGAGCACTCCACCCGGCAA----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70198 118 - 21531802 CAGAGCACTCCACCCA------GCAACCACAGAGCACTCCACCCAGCA-AC--------CACAGAGCACTCCACCCAGCAACCGC------AGAGCACTCCAC-----------------------CCAGCA-ACC-----------------GCATCC------ACAGAGCACTCCACCCAGAAA----- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251304 124 + 6586416 CAGACCACTCCACCCAGCAACCGCACCTGCAGAGCACTCCACCCAGCA-AC--------CGCAGAGCACTCCACCCAGCAACCGC------AGACCACTCCAC-----------------------CCAGCA-ACC-----------------GCACCT------GCAGAGCACTCCACCCAGCAA----- i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=68299.000000 s hg38.chr7_KI270899v1_alt 96167 29 + 190869 TCCGCAGAGCACTCCACCCAGCAA-CCGCA s panTro5.chrUn_NW_015974889v1 14693 29 + 17818 TCAGTAGAGCACACCA-CCAGCAACCCGCA i panTro5.chrUn_NW_015974889v1 I 1 C 0 s gorGor5.CYUI01015914v1 57011 24 - 432965 TCCGCAGAGCACTCCACCCAGCAA------ i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112553 29 + 85365473 tctgcagagcactacacccagcaa-ctgca i nomLeu3.chr20 T 29 T 203 s rheMac8.chr3 33963195 28 + 185818997 -CCGCAGAGCACTCCACCCAGCAA-CCGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579533 28 + 192294377 -CCGCAGAGCACTCCACCCAGCAA-CCGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340950 22 - 9440265 -CCGCGGAGCACTCCACCCAGC-------A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16932056 28 - 21915920 -CCGCAAAGCACTCCACCCAGCAA-CCGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70316 28 - 21531802 -CCACAGAGCACTCCACCCAGCAA-CCGCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251428 22 + 6586416 -CTGCAGAGCACTCCACCCAGC-------A i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=424521.000000 s hg38.chr7_KI270899v1_alt 96196 185 + 190869 TCCGCAGAGCACTCCACCCAGCAACCGCATCCGCAGAGCACTCCACCCAGCAACC-----------------GCAT------CCG----CAGA-GCACT-CCACCCAGCAACCGCATCCGCAGAGCACTCCACCCAGCAACCGCATCCGCAGAGCACTCCA--CCCAG--CAACC-----------------------GCATCCGCAGA-GCACTCCAC-CCAGCA-ACC----GCATCCGCAGAGCA s panTro5.chrUn_NW_015974889v1 14722 183 + 17818 TCCGCAGAGGACT-CAGCCACCAACCGCATC--CAGAGCACTCCATCCAGCAACC-----------------GCAT------CTGGCATCAGAGGCACT-CCACCCAGCA-------CTGCAGAGAACTCCACCCAGCAACGCTAT-CGCAGAG-ACTCCAACCGCAG--CAACG-----------------------GCATCTGCAGACACACTCCACGCCAGCATACC----GCATCCGTAGAGCA i panTro5.chrUn_NW_015974889v1 C 0 I 6 s gorGor5.CYUI01015914v1 57035 176 - 432965 -CCGCAGAGCACTCCACCCAGCAACCGCATCCGCAGAGCACTCCACCCAA----------------------GCAT------CTG----CAGA-GCACTCCCACCCAGCAACCACATCCGCAGAGCACTCCACCCAGCAAC------CGCAGAGCACTCCA--CCCAGGCAAACC-----------------------GCATCCGCAGA-GCACT-----ACCGCA-ACCCTCAGCAACCGCAGAGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112379 185 + 85365473 TCTGCAGAGCACTACACCCAGCAACCGCATCCACAGAGCACTCCACCCAGCAACT-----------------GCAT------CCA----CAGA-GCACT-ACATCCAGCAACCGCATCCGCAGAGCACTCTACCCAGCAACCGCATCTGCAGAGCACTCTA--CCCAG--CAACT-----------------------GCATCTGCAGA-GCACTCTAC-CCAGCA-ACT----Gcatctgcagagca i nomLeu3.chr20 T 203 C 0 s rheMac8.chr3 33963223 207 + 185818997 ACCACAGAGCACTCCACCCAGCAACTGCAACTGCAGAGCACTCCACGCAGCAACCGCACAGCACTCCACCCAGCAA------CCA----CAGA-GCCCT-CCACCCAGCAA------CTGCAGAGCACTCCACCCAGCAACTGCAACTGCAGAGCACTCCA--CGCAG--CAACCGCACAGCACTCCACCCA------GCAACCACAGA-GCCCTCCAC-CCAGCA-A----------CTGCAGAGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579561 207 + 192294377 ACCACAGAGCACTCCACCCAGCAACTGCAACTGCAGAGCACTCCACGCAGCAACCGCACAGCACTCCACCCAGCAA------CCA----CAGA-GCCCT-CCACCCAGCAA------CTGCAGAGCACTCCACCCAGCAACTGCAACTGCAGAGCACTCCA--CGCAG--CAACCGCACAGCACTCCACCCA------GCAACCACAGA-GCCCTCCAC-CCAGCA-A----------CTGCAGAGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4340972 190 - 9440265 ACCACAGAGCACTCCACCCAGCAACTGCACCTGAAGAGCACTCCATGCAGCAACTGCAGAGCACTCCACCCGGCAA------CCG----CAGA-GCACT-CCACCCGGCAA------CCGCAGAGCACTCCACCCAGCAACCGTAACCACAGAGCACTCCA--CCCAG--CAACT-----------------------GCAACTGCAGA-GCACTCCAC-GCAGCA-A----------CCACACGGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16932084 219 - 21915920 ACTGCAGAGCACTCCACCCAGCAACTGCAACTGCAGAGCACTCCATCCAGCCACTGCAGAGCACTCCACCCAGCAACTGCACCTG----CAGA-GCTCT-CCACGCAGCAA------CCGCACAGCACTCCACTCAGCAACTG------CAGAGCACTCCA--CCCAG--CAACTGCAGAGCACTCCACCCAGCAACCGCAACCGCAGA-GCACTCCAC-CCAGCA-ACT----GCACCTGCACAGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70344 179 - 21531802 ACCACAGAGGACTCCACCCAGCAACCACAACCACAGAGGACTCCACCCAGCAACC-----------------ACAA------CCA----CAGA-GCACT-CCACCCAGCAA------CCACAGAGCACTCCACCCAGCAACCGCATCCACAAAGCACTCCA--CCCAG--CAACC-----------------------ACATCCACAGA-GCACTCCAC-CCAGCA-ACC----GCATCCACAGAGCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251450 161 + 6586416 ACTGCAGAGCCCTCCACCCAGCAACCGCACCTGCAGAGCACTCCACCCAGCAACC-----------------TCAC------CTG----CAGA-GCACT-CCACCCAGCAA------CCACAGAGCACTCCACCCAGCAACCA------CAGAGCCCTCCA--CCCA-------------------------------GCAACCGCAGA-GCACTCCAC-CCAGCA-A----------CCGCAGAGCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=46871.000000 s hg38.chr7_KI270899v1_alt 96381 18 + 190869 CTCCACCCAGCAA------CCGCA s gorGor5.CYUI01015914v1 57211 24 - 432965 CTCCACCCAGCAACCGCATCCGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112564 18 + 85365473 ctacacccagcaa------ctgca i nomLeu3.chr20 C 0 T 81 s rheMac8.chr3 33963430 24 + 185818997 CTCCACCCAGCAACTGCACCTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579768 24 + 192294377 CTCCACCCAGCAACTGCACCTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4341162 18 - 9440265 CTCCACCCAGCAA------CCACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16932303 18 - 21915920 CTCCACCCAGCCA------CCGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70523 18 - 21531802 CTCCACCCAGCAA------CCGCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251611 18 + 6586416 CTCCACCCAGCAA------CCGCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14905 6 + 17818 I a score=28740.000000 s hg38.chr7_KI270899v1_alt 96399 9 + 190869 GAGCACTCC s gorGor5.CYUI01015914v1 57235 9 - 432965 GAGCACTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112501 9 + 85365473 GAGCACTCT i nomLeu3.chr20 T 81 C 0 s rheMac8.chr3 33963454 9 + 185818997 GAGCACTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579792 9 + 192294377 GAGCACTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4341180 9 - 9440265 GAGCCCTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16932321 9 - 21915920 GAGCACTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70541 9 - 21531802 GAGCACTCC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251629 9 + 6586416 GAGCACTCC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 14905 6 + 17818 I a score=29754.000000 s hg38.chr7_KI270899v1_alt 96408 8 + 190869 ACCCAGCA s panTro5.chrUn_NW_015974889v1 14911 8 + 17818 acccagca i panTro5.chrUn_NW_015974889v1 I 6 I 1 s gorGor5.CYUI01015914v1 57244 8 - 432965 ACCCAGCA i gorGor5.CYUI01015914v1 C 0 I 2 s nomLeu3.chr20 112510 8 + 85365473 ACCCAGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33963463 8 + 185818997 ACCCAGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579801 8 + 192294377 ACCCAGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4341189 8 - 9440265 ATCCAGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16932330 8 - 21915920 TCCCAGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70550 8 - 21531802 ACCcagaa i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 251638 8 + 6586416 ACCCAGCA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=3276.000000 s hg38.chr7_KI270899v1_alt 96416 1 + 190869 A s panTro5.chrUn_NW_015974889v1 14920 1 + 17818 a i panTro5.chrUn_NW_015974889v1 I 1 C 0 s nomLeu3.chr20 112518 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33963471 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579809 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4341197 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16932338 1 - 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70558 1 - 21531802 a i chlSab2.chr28 C 0 T 110 s colAng1.NW_012117710v1 251646 1 + 6586416 A i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e gorGor5.CYUI01015914v1 57252 2 - 432965 I a score=14503.000000 s hg38.chr7_KI270899v1_alt 96417 7 + 190869 CCGCATC s panTro5.chrUn_NW_015974889v1 14921 7 + 17818 ccgcatc i panTro5.chrUn_NW_015974889v1 C 0 C 0 s nomLeu3.chr20 112519 7 + 85365473 CTGCATC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33963472 7 + 185818997 CTGCACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579810 7 + 192294377 CTGCACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4341198 1 - 9440265 ------C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16932339 7 - 21915920 CTGCACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70449 7 - 21531802 CCGCATC i chlSab2.chr28 T 110 C 0 s colAng1.NW_012117710v1 251647 7 + 6586416 CTGCACC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e gorGor5.CYUI01015914v1 57252 2 - 432965 I a score=85983.000000 s hg38.chr7_KI270899v1_alt 96424 28 + 190869 TGCAGAACACTCCacccagcaa------ccacat s panTro5.chrUn_NW_015974889v1 14928 22 + 17818 cgcagcgcactccacccagcaa------------ i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 57254 28 - 432965 TGCAGAGCACTCCacccagcaa------ccacat i gorGor5.CYUI01015914v1 I 2 C 0 s nomLeu3.chr20 112526 28 + 85365473 TGCAGAGCACTCTACCCAGCAA------CTGcat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33963479 28 + 185818997 TGCAGAGCACTCCACCCAGCAA------CTGCAG i rheMac8.chr3 C 0 I 17 s macFas5.chr3 33579817 28 + 192294377 TGCAGAGCACTCCACCCAGCAA------CCGCAG i macFas5.chr3 C 0 I 17 s macNem1.NW_012019910v1 4341199 34 - 9440265 TGCAGAGCACTCCACCCAGCAACTGCACCTGCAG i macNem1.NW_012019910v1 C 0 I 17 s cerAty1.NW_012002954v1 16932346 28 - 21915920 TGCAGAGCACTCCACGCAGCAA------CCGCAC i cerAty1.NW_012002954v1 C 0 I 17 s chlSab2.chr28 70456 28 - 21531802 CACAAAGCACTCCACCCAGCAA------CCACAT i chlSab2.chr28 C 0 I 75 s colAng1.NW_012117710v1 251654 28 + 6586416 TGCAGAGCACTCCACCCAGCAA------CTGcac i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 94071 975 - 2515279 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=93071.000000 s hg38.chr7_KI270899v1_alt 96452 27 + 190869 ccgcagagcactccacccagcaa------ccgc s panTro5.chrUn_NW_015974889v1 14950 8 + 17818 ccgcagag------------------------- i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 57282 27 - 432965 ccgcagagcactccacccagcaa------ccac i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112554 27 + 85365473 ctgcagagcactacacccagcaa------ctgc i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 33963524 27 + 185818997 CCGCagagcactccacccagcaa------ccac i rheMac8.chr3 I 17 C 0 s macFas5.chr3 33579862 27 + 192294377 CCGCagagcactccacccagcaa------ccac i macFas5.chr3 I 17 C 0 s macNem1.NW_012019910v1 4341250 27 - 9440265 CCGCagagcactccacccagcaa------ccac i macNem1.NW_012019910v1 I 17 C 0 s cerAty1.NW_012002954v1 16932391 27 - 21915920 ctgcagagcactccacccagcaa------ccac i cerAty1.NW_012002954v1 I 17 C 0 s chlSab2.chr28 70559 27 - 21531802 ccacagagcactccacccagcac------ctgc i chlSab2.chr28 I 75 C 0 s manLeu1.NW_012101810v1 95076 27 - 2515279 CCGCagagcactccacccagcaa------ccac i manLeu1.NW_012101810v1 M 975 C 0 s colAng1.NW_012117710v1 251682 33 + 6586416 ctgcagagcactccacccagcaactgcacctgc i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=3276.000000 s hg38.chr7_KI270899v1_alt 96479 1 + 190869 a s gorGor5.CYUI01015914v1 57309 1 - 432965 a i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33963551 1 + 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579889 1 + 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4341277 1 - 9440265 a i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16932418 1 - 21915920 a i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70586 1 - 21531802 a i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 95103 1 - 2515279 a i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 251715 1 + 6586416 a i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e nomLeu3.chr20 112581 1 + 85365473 I e panTro5.chrUn_NW_015974889v1 14958 0 + 17818 C a score=4657496.000000 s hg38.chr7_KI270899v1_alt 96480 1118 + 190869 gagcacacacacttct-caagtgtgctggagcttgctccaggaagaac-cacatgttgggccacagagaaagtc-tcaataaatttcaaaggactgaaatcatacaaagtgggctccataaccacaatggaattaagttagaaatcaataacagaaggaaatttgagaaattcacca--aaatg-tgtaaaataaacaacacactg-ttatataaccaacagatcaaagaagaaatcacaacggaaattagaaaatactttg-agatgaaaggcattacaagaaaacc-acagaccaatatccttaagaatataaatgcaaaaatcctc-cacaaaatactagcaaatcaaatccagcaacatataaaaag-aattatgtgcaaaaccagatgagatttatcccaggaacacaaggttgatttgatatccaaaagccaatc-aatgtaatacagcatattaa-tggattcatacaaaaccactcttagaagaaaacataggaggaaa-tccttatggcctgagtttggcaatgatttcttcaatatggcaccaaaagcacaagtgat-------aaaagaaa--------agagagataaatgacactt-cactaaaattaaaaacttctgtgctacaaccaatgccattaagaaagtgcaaag-ataacccacataaaaggagaaaatattaggaaatcttctagagtaatcccctcttatctgcaggcaatacatctcaaggcccccagtagatggctgagacc-acagagattaccaaacactgtatatactgt-tttttcccatatatgtatacctgtgataaagtttaatttataaattaggcacaggaagagattatcaaggataactataat-aaaa--ttgaac-aatgataaaaatat-gccgtaataagacttatgtga-atgtgac-ctctctatcgctctctctctcaataccttaatgtactgtactcacccctctaaatacctta-ttgtactgttctcacccctctttgttgtcatcatgtgagatgacggaattgcctccgggaggaggtgaggtgaggtgaggtgaatcacgcag-gcattgtgacattgtcttaggatgctg-ttgaccttccgatgaatgatc-ggaaggaggatc--accaagc s panTro5.chrUn_NW_015974889v1 14958 1102 + 17818 ----acacacacttccacaagtgtgctggaacttgcgcccagaagaacgcacatgtt-ggccacagagaaagtcttcaataaatttc-aaggactgaaatcatacaaagt-ggctccataa--accatgga--taagt---agatcaataacagaaggaaatttgagaaattcaacggcaaatgatgtaaaataaacaacacactgtttatataacaaacagatcaaagaagaaatcacaacgg-aattagaaaatactttgaagatgaaagacattacaagaaaaccgacaga-cgatttccttaag-atataaatgcaaaaatcctcgcac-aaatactagcaaatc-aatccagcaacatataaaaagaaattatgtgc-aaaccagatgagatttatcccaggaacacaaggttgatttgatatccaaa--ccaatcaaatgtaatacagc-tattaattggatTCATAC--AACCactcttagaagaaaacatagaggaaaattccttatggcctgagtttggcaatgatttcttc-atatggcac---aagcacaagtgat-------aaaagaaa--------aaagagataaatgacacttccactaaaattaacaa-ttatgtgctacaacc-atgccattaagaaagtgcaaagaataacccacataaaaaggagaaata-tagcaaatcct-tagagtaatgccctcttatctgcaggcaatacatctcaaggcccccagtaagaggctgagaccgacagagattacc-aacactgtatatactgtctttttcccatatatatatacctgtgataaagtttaatttataaatta-gcacagaaagat-taatcaagagatactataat-aaaaatttgaacaaatgataaaaatatagccgtaataagac-tatgtgagatgtgactctctctat--ctctctttctcaatacc-tattgtactgtactcacgcctct-aataccttatttgtactgttct-acctcctttggttgtgatcatgtgagatgacggaattgcctccggga-gaggtgagtgaaggtgaggtgaatcacgcaacgcattgtgaca-tgtctttagatgctgtttgaccttccgatgaatgatc--gaaggaggatcaaaccaagc i panTro5.chrUn_NW_015974889v1 C 0 I 13 s gorGor5.CYUI01015914v1 57310 1115 - 432965 gagcacacacacttct-caagtgtgctggagcttgctccaggaagaac-cacatgttgggccacagagaaagtc-tcaataaatttcaaaggactgaaatcatacaaagtgggctccataaccacaatggaattaagttagaaatcaataacagaaggaaatttgagaaattcacca--aaatg-tgtaaaataaacaacacactg-ttatataaccaacagatcaaagaagaaatcacaacggaaattagaaaatactttg-agatgaaaggcattacgagaaaacc-acggaccaatatccttaagaatataaatgcaaaaatcctc-cac-aaatactagcaaatcaaatccagcaacatataaaaag-aattatgtgcaaaaccagataagatttatcccaggaacacaaggttgatttgatatccaaaagccaatc-aatgtaatacagcatattaa-tggattcatacaaaaccactcttagaagaaaacacaggaggaaa-tccttatggcctgagtttggcaatgatttcttcaatatggcaccaaaagcacaagtgat-------aaaagaaa--------aaagagataaatgacactt-cactaaaattaaaaacttctgtgctacaaccaatgccattaagaaagtgcaaag-ataacccacataaaaggagaaaatattagcaaatcttctagagtaat-ccctcttatctgcaggcaatacatctcaaggcccccagtagatggctgagacc-acagagattaccaaacactgtatatactgt-tttttcccatatatatatacctgtgataaagtttaatttataaattaggcacaggaagagattatcaaggataactataat-aaaa--ttgaac-aatgataaaaatat-gccgtaataagacttatgtga-atgtgac-ctctctctctctctctctctcaataccttattgtactgtactcacccctctaaata-ctta-ttgtactgttctcacccctctttgttgtgatcatgtgagatgacggaattgcctccgggaggaggtgaggtgaggtgaggtgaatcacacag-gcattgtgacattgtcttaggatgctg-ttgaccttccgacgaatgatc-ggaaggaggatc--accaagc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 112582 1091 + 85365473 gagcacacacacttct-cgagtgtgctggaacttgctccaggaagaac-cacatgttgggccacagagaaagtc-tcaataaatttcaaaggactgaaatcatacaaagtgggctccaaaaccacaatggaattaagttagaaatcaataacagaaggaaatttgagaaattcacca--aaatg-tgtaaaataaacaacaccatg-ttatataaccaacagatcaaataagaaatcacaacggaaattagaaaatactttg-agatgaaaggcattacaagaaaacc-acagaccaatatccttaagaatgtaaatgcaaaaatcctc-cacaaaatactagcaaatcgaatccagcaacatacaaaaag-aattatgtgcaaaaccagatgagagttatcccaggaacacaaggttgatttgacatccaaacgccaatc-aaggtaatgcagcatattaa-tggattcatacaaaaccactcttagaagaaaacacaggaggaaa-ccctcatgacctgagtttggcaatgatttcttcaatatggcaccaaaagcacaagtgat-------aaaagaaa--------aaagagacaaattacactt-cactaaaattaaaaacttctgtactacaaccaatgccattaagaaagtgcaaag-ataacccacataaagtgagaaaatattagcaaatcatctacagtaatcccctcttatctgcaggcaatacatctcaaggcccccaatagatggctgagatc-acagagattaccacaccctgtatatactg--tttttcccatatatacatacctgtgataaagtttaatttataaattaggcacaggaagagagtatcaaggataactataat-aaaa--ttgaac-aatgataaaaatat-gccatagtaagacttatgtga-atgtgac-ctctctctgtctctctctct---------------------------ctctcaatacctta-ctgtactgtactcatccctcctcgttgtgttcatgtgagatgatggaattgcctccgggaggaggtgaggtgaggtgaggtgaatcacgcag-gcattgtgacgttgccttaggatgctg-ttgaccttctgacgaatgatcggaaaggaggatc--acccagt i nomLeu3.chr20 I 1 C 0 s rheMac8.chr3 33963552 1098 + 185818997 gggcacacacact----ttagtgtgctggggtttgctccaggagggac-cacatgttgggccacagagaaagta-tcaataaacttaaaaggactgaaatcatacaaagtaggctccataaccacaacagaattaagttagaaatcaataacagaaggaaatttgagaaattcacca--aaatg-tgtaaaataaacaacacactg-ttatataaccaacagatcaaaaaagaaatcacaatggaacttagaaaatactttg-agatgaaaggcattgcaagaaaact-acagaccaatatccttaagaatataaatgcaaaaatcctc-cacaaaatactagtaaatcaaatccagcaacatataaaaag-aattctgtacaaaaccagatgagatttatcccaggaacacaaggttgatttgacatccaaatgccaatc-catgtaatacagcatgttga-tggaTTCCTACAGAACCactcttacaagaaaacataggaggaaa-tcctcatggcctgaatttggcaatgatttcttca-------accaaaagcacaaatgat----aaaaaaaaaaa--------aaagagataaattatactt-cattagaattaaaaac-----tgctgcaaccaatgccattaagaaagtgcaaag-atagcccacatcgagggggaaaatattagcaaatcatctacagtaatcccctcttagctgcaggtgacacatctc-aggcccccagtagatggctgagacc-acagagattaccaaacactgtgtatactg--ttttttccatatatacatacctgtgataaagtttaatttataaagtaggcacaggaagagattgtcaaggataactataataaaaa--ttgaac-actgataaaaatat-gccataacaagatttatgtga-atgtgac---ctct----ttctctctctcaataccttagtgtactgtactcacccatctaaatacctta-ttatatggtactcacccctctttgttgtgatgatgtgagatgatggactggcctccaggaggaggtgagaggaggtgaggtgaatgacgctg-gcactgtgacgttgccttaggatgctg-ttgaccttctgacgaatg-tc-agaaggaggatc--accaagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33579890 1103 + 192294377 gggcacacacact----ttagtgtgctggggtttgctccaggagggac-cacatgttgggccacagagaaagta-tcaataaacttaaaaggactgaaatcatacaaagtaggctccataaccacaacagaattaagttagaaatcaataacagaaggaaatttgagaaattcacca--aaatg-tgtaaaataaacaacacactg-ttatataaccaacagatcaaaaaagaaatcacaatggaacttagaaaatactttg-agatgaaaggcattgcaagaaaact-acagaccaatatccttaagaatataaatgcaaaaatcctc-cacaaaatactagtaaatcaaatccagcaacatataaaaag-aattctgtgcaaaaccagatgagatttatcccaggaacacaaggttgatttgacatccaaatgccaatc-catgtaatacagcatgttga-tggaTTCctacaaaaccactcttataagaaaacataggaggaaa-tcctcatggcctgaatttggcaatgatttcttca-------accaaaagcacaaatgat-aaaaaaaaaaaaaa--------aaagagataagttatactt-cattagaattaaaaac-----tgctgcaaccaatgccattaagaaagtgcaaag-atagcccacatcgagggggaaaatattagcaaatcatctacagtaatcccctcttagctgcaggcgacacatctc-aggcccccagtagatggctgagacc-acagagattaccaaacactgtgtatactg--ttttttccatatatacatacctgtgataaagtttaatttataaagtaggcacaggaagagattatcaaggataactataataaaaa--ttgaac-actgataaaaatat-gccataacaagatttatgtga-atgtgac-ctctct----ttctctctctcaataccttagtgtactgtactcacccatctaaatacctta-ttatatggtactcacccctctttgttgtgatgatgtgagatgatggactggcctccaggaggaggtgagaggaggtgaggtgaatgacgctg-gcactgtgacgttgccttaggatgctg-ttgaccttctgacgaatg-tc-agaaggaggatc--accaagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4341278 1101 - 9440265 gggcacacacact----ttagtgtgctggggtttgctccaggagggac-cacatgttgggccacagagaaagta-tcaataaacttaaaaggactgaaatcatacaaagtaggctccataaccacaacagaattaagttagaaatcaataacagaaggaaatttgagaaattcacca--aaatg-tgtaaaataaacaacacactg-ttatataaccaacagatcaaaaaagaaatcacaatggaacttagaaaatactttg-agatgaaaggcattgcaagaaaact-acagaccaatatccttaagaatataaatgcaaaaatcctc-cacaaaatactagtaaatcaaatccagcaacatataaaaag-aattctgtgcaaaaccagatgagatttatcccaggaacacaaggttgatttgacatccaaatgccaatc-catgtaatacagcatgttga-tggaTTCctacaaaaccactcttacaagaaaacataggaggaaa-tcctcatggcctgaatttggcaatgatttcttca-------accaaaagcacaaatgat---aaaaaaaaaaaa--------aaagagataaattatactt-cattagaattaaaaac-----tgctgcaaccaatgccattaagaaagtgcaaag-atagcccacatcgagggggaaaatattagcaaatcatctacagtaatcccctcttagctgcaggtgacacatctc-aggcccccagtagatggctgagacc-acagagattaccaaacactgtgtatactg--ttttttccatatatacatacctgtgataaagtttaatttataaagtaggcacaggaagagattatcaaggataactataataaaaa--ttgaac-actgataaaaatat-gccataacaagatttatgtga-atgtgac-ctctct----ttctctctctcaataccttagtgtactgtactcacccatctaaatacctta-ttatatggtactcacccctctttgttgtgatgatgtgagatgatggactggcctccaggaggaggtgagaggaggtgaggtgaatgacgctg-gcactgtgacgttgccttaggatgctg-ttgaccttctgacgaatg-tc-agaaggaggatc--accaagc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16932419 1104 - 21915920 gggcacacacact----tcagtgtgctggggtttgctccaggagggac-cacatgttgggccacagagaaagtc-tcaataaacttaaaaggactgaaatcatacaaagtaggctccataaccacaatggaattaagttagaaatcaataacagaaggaaatttgagaaattcacca--aaatg-tgtaaaataaacaacacactg-ttatataaccaacagatcaaaaaagaaatcacaacggaacttagaaaatactttg-agatgaaaggcattgcaagaaaact-acagaccaatatccttaagaatataaatgcaaaaatcctc-cacaaaatactagcaaatcaaatccagcaacatataaaaag-aattctgtgcaaaaccagatgagatttatcccaggaacacaaggttgatttgacatccaaatgccaatc-catgtaatacagcatgttga-tggaTTCctacaaaaccactcttacaagaaaacataggaggaaa-tcctcatggcctgaatttggcaatgatttcttca-------accaaaagcacaaatgattaaaaaaaaaaagag--------agagagataaattatactt-cattagaattaaaaac-----tgctgcaaccaatgccattaagaaagtgcaaag-acagcccacatcgagggggaaaatattagcaaatcatctacagtaatccccacttagctgcagacgacacatctc-aggcccccagtagatggctgagacc-acagagattaccaaacactgtgtatactg--ttttttccatatatacatacctgtgataaagtttaatttataaagtaggcacaggaagagattatcaaggataactataataaaaa--ttgaac-actgataaaaatat-gccgtaacaagatttatgtga-atgtgac-ctctct----ttctctctctcaataccttagtgtactgcactcacccatctaaatacctta-ttatatggtactcacccctctttgttgtgatgatgtgagatgatggactggcctccaggaggaggtgagaggaggtgaggtgaatgatgctg-gcactgtgacgttgccttaggatgctg-ttgaccttctgacgaatg-tc-agaaggaggatc--accaagc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 70587 1108 - 21531802 gagcacacacact----tgagtgtgctggggtttgctccaggagggac-cacatgttgggccacagagaaagtc-tcaataaatttaaaa-gactgaaatcatacaaagtgggctccataaccacaatggaattaagttagaaatcaataacagaaggaaatttgagaagttcacca--aaatg-tgtaaaataaacaacacactg-ttatataaccaacagatcaaaaaagaaatcacaacggaaattagaaaatactttg-agatgaaaggcgttgcaagaaaact-acagaccaatatccttaagaatataaacgcaaaaatcctc-cacaaaatactagcaaatcacatccagcaacatagaaaaag-aattctgtgcaaaaccagatgagatttatcccaggaacacaaggctgatttgacatccaaaagccaatc-catgtaatacagcatgttga-tggaTTCctacaaaaccactcttagaagaaaacataggaggaaa-tcctcatggcctgagtttggcaatgatttcttca-------accaaaagcattaatgattttttttaaaaagag--------agagagataaattatactt-cattagaattaaaaacttctgtgctgcaacccatgccattaagaaagtgcaaag-atagcccacatcaagggggaaaatattagcaaatcatctacagtaatctcctcatagctgcaggcgacacatctc-aggcccccagtagatggctgagacc-acagagattaccaaacactgtgcatactg--ctttttccatatacacatacctgcgataaagtttaatttataaagtaggcacaggaagagatgatcaaggataactataat-aaaa--ttgaac-aatgataaaaatat-gccataacaagatttatgtga-atgtgac-ctctct----ttctctctctcaataccttagtgtactgtacacgcccctctaaatacctta-ttatacggtactcacccctctttgttgtgatgatgtgagatgacggaatggcctccgggaggaggtgagacgaggtgaggtgaatgacgctg-gcactgtgacgttgccttaggatgctg-tcgaccttctgatgaatgatc-agaagaagggtc--accaagc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 95104 1101 - 2515279 gggcacacacact----tcagtgtgctggggtttgctccaggagggac-cacgtgttgggccacagagaaagtc-tcaataaacttaaaaggactgaaatcatacaaagtaggctccataaccacaatggaattaagttagaaatcaataacagaaggaaatttgagaaattcacca--aaatg-tgtaaaataaacaacacactg-ttatataaccaacagatcaaaaaagaaatcacaacggaacttagaaaatactttg-agatgaaaggcattgcaagaaaact-acagaccaatatccttaagaatataaatgcaaaaatcctc-cacaaaatactagcaaatcaaatccagcaacatataaaaag-aattctgtgcaaaaccagatgagatttatcccaggaacacaaggttgatttgacatccaaacgccaatc-catgtaatacagcatgttga-tggaTTCctacaaaaccactcttacaagaaaacataggaggaaa-tcctcatggcctgaatttggcaatgatttcttca-------accaaaagcacaaatgatttttt---aaaaaaa--------agatagatgaattatactt-cattagaattaaaaac-----tgctgcaaccaatgccattaagaaagtgcaaag-acagcccacatcgagggggaaaatattagcaaatcatctacagtaatcccctcttagctgcaggcgacacatctc-aggcccccagtagatggctgagacc-acacagattaccaaacactgtgtatactg--ttttttccatatatacatacctgtgataaagtttaatttataaagtaggcacaggaagagattatcaaggataactataataaaaa--ttgaac-actgataaaaatat-gtcgtaacaagatttatgtga-atgtgac-ctctct----ttctctctctcaataccttagtgtactgtactcacccatctaaatacctta-ttatatggtactcacccctttttgttgtgatgatgtgagatgacggactggcctccaggaggaggtgagaggaggtgaggtgaatgacgctg-gcactgtgacgttgccttaggatgccg-ttgaccttctgacgaatg-tc-agaaggaggatc--accaagc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 251716 1116 + 6586416 gagcacacacact----tgagtgtgctggggcttgctccaggagggac-cacatgttgggccacagagaaagtc-tcaataaatttaaaaggactgaaatcatacaaagtgggctccataaccacaatggaatcaagttagaaatcaataacagaaggaaatttgagaaattcacca--aaatg-tgtaaaataaacaacacact--ttatataaccaacagatcaaaaaagaaatcacagtggaaattagaaaatacttta-agatgaaaggcattgcaagaaaact-accgaccaatattcttaagaatataaatgcaaaaatcctc-cataaaatactagcaaatcaaatccagcaacatataaaaag-aattctgtgcaaaaccagatgagatttatcccaggaacacaaggttgatttgacatccaaaagccaatc-catgtaatacagcatattgg-tggaTTCctacaaaaccactcttagaagaaaacataggaggaaa-tcctcatggcctgagtttggcaatgatttcttca-------accaaaagcacaaatgataaaaaaaaaaaaaaaagagagagagagagataaattatactt-cattagaattaaaagcttctgtgctgcaaccaatgccattaagaaagtgcaaag-atagcccacatcaaggaggaaaatattagcaaatcatctacagtaatcccctcttagctgcaggcgacacatctc-aggcccccaggagatggctgagacc-accgagattaccaaacactgtgtatactg--ttttttccatatatacatacctgcgataaagtttaatttataaagtaggcacaggaagagattatcaaggataactataac-aaaa--ttgaac-aatgataaaaatat-gccataacaagacttatatga-atatgac-ctctct----ttctctctctcaataccttagtgtactgtactcacccctctaaatacctta-ttatacggtactcacccctctttgttgtaatgatgtgagatgatggaattgcctccgggaggaggtgagaggaggtgaggtgaatgacgctg-gcactgtgacgttgccttgggatgctg-ttgaccttctgacgaatgatc-ggaaggaggatc--accaagc i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=31644.000000 s hg38.chr7_KI270899v1_alt 97598 9 + 190869 catgatgag s gorGor5.CYUI01015914v1 58425 9 - 432965 catgatgag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 113673 9 + 85365473 catgatgag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33964650 9 + 185818997 cacaatgag i rheMac8.chr3 C 0 I 2 s macFas5.chr3 33580993 9 + 192294377 cacaatgag i macFas5.chr3 C 0 I 2 s macNem1.NW_012019910v1 4342379 9 - 9440265 cacaatgag i macNem1.NW_012019910v1 C 0 I 2 s cerAty1.NW_012002954v1 16933523 9 - 21915920 cacaatgag i cerAty1.NW_012002954v1 C 0 I 1745 s chlSab2.chr28 71695 9 - 21531802 cacaataag i chlSab2.chr28 C 0 I 2 s manLeu1.NW_012101810v1 96205 9 - 2515279 cacaatgag i manLeu1.NW_012101810v1 C 0 I 2 s colAng1.NW_012117710v1 252832 9 + 6586416 cacgatgag i colAng1.NW_012117710v1 C 0 I 2 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 16060 13 + 17818 I a score=30285.000000 s hg38.chr7_KI270899v1_alt 97607 7 + 190869 caatggc s gorGor5.CYUI01015914v1 58434 7 - 432965 caatggc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 113682 7 + 85365473 caatggc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33964661 7 + 185818997 caatggc i rheMac8.chr3 I 2 C 0 s macFas5.chr3 33581004 7 + 192294377 caatggc i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 4342390 7 - 9440265 caatggc i macNem1.NW_012019910v1 I 2 C 0 s cerAty1.NW_012002954v1 16935277 7 - 21915920 caatggc i cerAty1.NW_012002954v1 I 1745 C 0 s chlSab2.chr28 71706 7 - 21531802 caatggc i chlSab2.chr28 I 2 C 0 s manLeu1.NW_012101810v1 96216 7 - 2515279 caatggc i manLeu1.NW_012101810v1 I 2 C 0 s colAng1.NW_012117710v1 252843 7 + 6586416 caatggc i colAng1.NW_012117710v1 I 2 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I e panTro5.chrUn_NW_015974889v1 16060 13 + 17818 I a score=304367.000000 s hg38.chr7_KI270899v1_alt 97614 73 + 190869 tggatgtcaggagcagac-agtgt---aac---gactaaggaaggagcagtctatacagtgtggatacagtggacaaa----gg s panTro5.chrUn_NW_015974889v1 16073 79 + 17818 tggatgtcaggagcagac-agtgtgggaatcgagactaaggaaggagcagtctatacagtgtggatacactggacaaa----gg i panTro5.chrUn_NW_015974889v1 I 13 C 0 s gorGor5.CYUI01015914v1 58441 73 - 432965 tggatgtcaggagcagac-agtgt---aat---gactaaggaaggagcagtctatacagtgtggatacactggacaaa----gg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 113689 73 + 85365473 tggatgtcaggagcagct-ggtgt---aat---gactaaggaaggagcagtctatacagtgtggatacactggacaaa----gg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33964668 71 + 185818997 tggatgtcaggagcaggc-ggtgt---aat---gactaaggaagaagcagtctatacagtgtggatacactggacaca------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33581011 71 + 192294377 tggatgtcaggagcaggc-ggtgt---aat---gactaaggaagaagcagtctatacagtgtggatacactggacaca------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4342397 71 - 9440265 tggatgtcaggagcaggc-ggtgt---aat---gactaaggaagaagcagtctatacagtgtggatacactggacaca------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16935284 72 - 21915920 tggatgtcaggagcaggcaggtgt---aat---gactaaggaagaagcagtctatacagtgtggatacactggacaca------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 71713 71 - 21531802 tggatgtcaggagcaggt-ggtgt---aat---gactaaggaagaagcagtctatacagtgtggatacactggacaca------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 96223 73 - 2515279 tggatgtcaggagtagac-ggtgt---aat---gactaaagaagaagcagtctatacaatgtggatacactggacacagg---- i manLeu1.NW_012101810v1 C 0 I 12 s colAng1.NW_012117710v1 252850 73 + 6586416 tggatgtcaggagcaggc-ggtgt---aat---gactgaggaaggagcagtctgtacagtgtgggtgcactggacaca--gg-- i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=38677.000000 s hg38.chr7_KI270899v1_alt 97687 18 + 190869 gatggttcacagctggga s panTro5.chrUn_NW_015974889v1 16152 18 + 17818 gatggttcacagctggga i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 58514 18 - 432965 gatggttcacagctggga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 113762 18 + 85365473 gatggttcactcccggga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33964739 15 + 185818997 ---ggctgacacccaggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33581082 15 + 192294377 ---ggctcacacccaggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4342468 15 - 9440265 ---ggctcacacccaggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16935356 15 - 21915920 ---ggctcacaccgaggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 71784 15 - 21531802 ---ggctcacacctgggg i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 252923 17 + 6586416 gatggctcacaccgggg- i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e manLeu1.NW_012101810v1 96296 12 - 2515279 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=3587191.000000 s hg38.chr7_KI270899v1_alt 97705 824 + 190869 gggatagcttgggctggagcaaggtctcactgtgctactcagaacaatgcacagttccatgtcgtattttcaagccatggctgaccacaggtaactgaaactgtggaaaccaggacaccaggtaaatgggacctgctgtatctgataagggactcatatccagaatatgtaaggaacacttaaaactcaaataaaataagggttattaaccccattttaaaatgggcaaaggatttgaataggcacttctcaaaagaagatgtacgaatggccagtaagtgcaagaaaagatgctcaacatcattagttattaggaagaagcaaatcaagaccacagggcgatgctacctcatacactaggagggtgatcctcaaaaagacagaaaatagtcttgacaaggacttaagaaacaggaaccttctttgggaaagaaaatagtgcagacaaaaacaatgaaaaggcgctgaaaatgagttcaacatagagtgaccacatggcccagcaatccc-cccctaggtgtgcgtcccagataattaaaaccatacatccagccaggctaaggggctcatgcctgtaatcccagcacttttggaggccgaggcaggcagatcacgaggtcaggagttcgagaccagcctgaccaacatgaagaaa-ccccatctctactaaaaatac-taaattatctgggcgtgatggcacatgcctgcagtcccagctactcgggaggctgaggcagaagaatcgcttgaac--------ccaggaggcaggggttgcagtgagccgaaatcgcaccactgcattccagcctgggcgacagagcgagactgt s panTro5.chrUn_NW_015974889v1 16170 824 + 17818 gggatagcttgggctggcgcaaggtctcactgtgctactcagaacaatgcacagttccgtgtcgtattttcaagccatggctgaccacaggtaactgaaactgtggaaaccaagacaccaggtaaatgggacctgctgtatctgataagggactcatatccagaatatgtaaggaacacttaaaactcaaataaaataagggttattaaccccattttaaaatgggcaaaggatttgaataggcacttctcaaaagaagacgtacgaatggccagtaactgcaagaaaagatgctcaacatcattagttattaggaagaagcaaatcaagaccacagggagatgccacctcatacactaggagggtgattctcaaaaagacagaaaatagtcttgacaaggacttaagaaataggaaccttctttgggaaagaaaatagtgcagacaaaaacaatgaaaaggcgctgaaaatgagttcaacatagagtgaccacatggcccagcaatccc-ctcctaggtgtgcgtcccagataattaaaaccatacatccagccaggctaaggggctcatgcctgtaatcccagcacttttggaggccgaggcaggcagatcacgaggtcaggagttcgagaccagcctgaccaacatgaagaaa-ccccatctctactaaaaatac-aaaattatctgggcgtgatggcacatgcctgcagtcccagctactcgggaggctgaggcagaagaatcgcttgaac--------ccaggaggcaggggttgcagtgagccgaaatcgcaccactgcattccagcctgggcgacagagcgagactgt i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 58532 821 - 432965 gggatagcttgggctggcgcaaggtctcactgtgctactcagaacaatgcacagttccatgttgcattttcaagccatggctga-cacaggtaactgaaactgtggaaaccaagacaccaggtaaatgggacctgctgtatctgataagggactcatatccagaatatgtaaggaacacttaaaactcaaataaaataagggttattaaccccatttaaaaatgggcaaaggatttcaataggcacttctcaaaagaagatgtacgaatggccagtaagtgcatgaaaagatgctcaacattattagttattaggaagaagcaaatcaagaccacagggagatgctacctcatacactaggagggtgatcctcagaaagacagaaaatagtcttgacaaggacttaagaaataggaaccttctttgggaaagaaaatagtgcagacaaaaacaacgaaaaggcgctgaaaatgagttcaacatagagtgaccacatggcccagcaatccc-ctcctaggtgtgcgt-ccagataattaaaaccatacatccagccaggctaaggggctcatgcctgtcatcccagcacttttggaggccgaggcaggcagatcacgaggtcaggagtttgagaccagcctgaccaacatgaagaaa-ccccatctctactaaaaatac-aaaattatctgggcatgatggcacatgcctgcagtcccagctactcgggaggatgaggcagaagaatcgcttgaa---------ccgggaggcaggggttgcggtgagccgaagtctcaccactgcattccagcctgggcgacagagcgagactgt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 113780 805 + 85365473 gggatagcttgggctggca--------------------cagaacgatgcacagttccatgtcgtattttcaagccatggctgaccacaggtaactgaaactgaggaaaccaagacaccaggtaagtggggcctgctgtatctgataagggactcatatccagaatatgtaaggaacacttaaaactcaaataaaataagggctattaaccccattttaaaataggcaaaggatttgaacaggcgcttctcaaaagaagatgcacgaatggccagtaagtgcatggaaagatgcccaacattattagttattaggaagaagcaaatcaagaccacagggagatgccgcctcttacactaggagggtaatcctcaaaaagacagaaaatagtcttgacaaggacttaagaaataggaaccttctttgggaaagaaaatagtgcagacaaaaacaaggaaaaggcgctgaaaatgagtccaacatagagcgaccaaatggctcagcaatcccactcctaggtgtgcgtcccagataattaaaaccatacatccagccaggctaaggggctcatgcctgtaatcccagcattttgggaggccgaggcgggcagatcatgaggtcaggagttcgagaccagcctgaccaatgtggagaaa-ccccgtctctactaaaaatac-aaaattatctgggcatgatgacacatgcctgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaac--------ccgtgaggcagaggttgcagtcagccgaaattacaccactgcattccagcctgggcgacagagcgagactgt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33964754 832 + 185818997 ggaacagcctgggctggcacaagatctcactgtgctactcggaacaatgcacagttccgtgtcatattttcaggccacggctgaccacaggtaactgaaactgaggaaaccaagacaccagataagtggggcctgctgtatctgataagggactcatatacagaatatgtaaggaacacttaaaactcaaataaaataagggcaaacaaccccatgttgaaatgggaaaaggatttgaatgggcgcttctcaaaagaagatgcatgaatagccagtgagggcgggaaaagatgctcagcgttattagttactaggaagaagcaaatcgagaccacagggagatcccgcctcacacgccaggagggtaatcctcaaaaagacagaaactggtgttgacaaggactcgagaaataggaaccttctctgggaaagaaaatagtgcagacagaaacaatgaaaaggcactgaaaattagttcaac--agagtgaccgtatggtccagcaatcccactcctagatgtgtgtaccagataattaaaatcatacatcgggccaggcgtaggggctcacgcctgtaatcccagaatactgggaggcagaggtgagcggatcacaaggtcaggagttcgagactagcctggccaacatggagaaa-ccccacctctactaaaaatacaaaaattagtcaggcgtagtggtgggtgcctgtaatcccagctactcgggaggccaaggcagaagaatcgcttgaacgcaggaggcagaggagcagaggttgcagtgagccgaaatcacaccgctgcattccagcctgggtgacagagcaagactgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33581097 832 + 192294377 ggaacagcctgggctggcacaagatctcactgtgctactcggaacaatgcacagttccgtgtcatattttcaggccacggctgaccacaggtaactgaaactgaggaaaccaagacaccagataagtggggcctgctgtatctgataagggactcatatacagaatatgtaaggaacacttaaaactcaaataaaataagggcaaacaaccccatgttgaaatgggaaaaggatttgaatgggcgcttctcaaaagaagatgcatgaatagccagtgagggcgggaaaagatgctcagcgttattagttactaggaagaagcaaatcgagaccacagggagatcccgcctcacacgccaggagggtaatcctcaaaaagacagaaactggtgttgacaaggactcgagaaataggaaccttctctgggaaagaaaatagtgcagacagaaacaatgaaaaggcactgaaaattagttcaac--agagtgaccgtatggtccagcaatcccactcctagatgtgtgtaccagataattaaaatcatacatcgggccaggcgtaggggctcacgcctgtaatcccagaatactgggaggcagaggtgagcggatcacaaggtcaggagttcgagactagcctggccaacatggagaaa-ccccacctctactaaaaatacaaaaattagtcaggcgtagtggtgggtgcctgtaatcccagctactcgggaggccaaggcagaagaatcgcttgaacgcaggaggcagaggagcagaggttgcagtgagccgaaatcacaccgctgcattccagcctgggtgacagagcaagactgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4342483 832 - 9440265 ggaacagcctgggctggcacaagatctcactgtgctactcggaacaatgcacagttctgtgtcatattttcaggccatggctgaccacaggtaactgaaactgaggaaaccaagacaccagataagtggggcctgctgtatctgataagggactcatatacagaatatgtaaggaacacttaaaactcaaataaaataagggcaaacaaccccatgttgaaatgggaaaaggatttgaatgggtgcttctcaaaagaagatgcatgaatagccagtgagggcgggaaaagatgctcagcgttattagttactaggaagaagcaaatcgagaccacagggagatcccgcctcacacgccaggagggtaatcctcaaaaagacagaaactggtgttgacaaggactcgagaaataggaaccttctctgggaaagaaaatagtgcagacagaaacaatggaaaggcactgaaaattagttcaat--agagtgaccgtatggtccagcaatcccactcctagatgtgtgtaccagataattaaaatcatacatcgggccaggcgtaggggctcacgcctgtaatcccagaatactgggaggcagagatgagcggatcacaaggtcaggagttcgagactagcctggccaacatggagaaa-ccccacctctactaaaaatacaaaaattagtcaggcgtagtggtgggtgcctgtaatcccagctactcgggaggccaaggcagaagaatcgcttgaacgcaggaggcagaggagcagaggttgcagtgagccaaaatcacaccgctgcattccagcctgggtgacagagcaagactgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16935371 832 - 21915920 ggaacagcctgggctggcacaagatctcactgtgctactcggaacaatgcacagttctgtgtcatattttcaggccacggctgaccacaggtaactgaaactgaggaaaccaagacaccagataagtggggcctgctgtatctgataagggactcatatacagaatatgtaaggaacacttaaaactcaaataaaataagggcaaaaaaccccatgttgaaatgggaaaaggatttgaatgggcgcttctcaaaagaagatgcatgaatggccagtgagggcgggaaaagatgctcagcgttattagttactaggaagaagcaaatcgagaccacagggagatgccgcctcacacgccaggagggtaatcctcaaaaagacagaaactggtgttgacaaggactcgagaaataggaaccttctctgggaaagaaaatagtgcagacagaaacaatgaaaaggcactgaaaattagttcaac--agagtgaccgtatggtccagcaatcccactcctagatgtgtgtaccagataattaaaatcatacatcgggccaggcgtaggggctcacgcctgtaatcccagaatactgggaggcagaggtgagcagatcacgaggtcaggagttcgagactagcctggccaacatggagaaa-ccccacctctactaaaaatacaaaaattagtcaggcgttgtggtgggtgcctgtaatcccagctactcgggaggccaaggcagaagaatcgcttgaacgcaggaggcagaggggcagaggttgcagtgagccaaaatcacaccgctgcattccagcctgggcgacagagcaagactgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 71799 810 - 21531802 ggaatagtctgggctggcacaagatctc-ctgtgctactcggaa-----cacagttccgtgtcgtattttcaggccacagctgaccacaggtaactgaaactgaggaaaccaagacaccagataagtggggcctgctgtatctgataattgactcatatacaggatatgtaaggaacacttaaaactcaaataaaataagggcaaacaaccccatgttgaaatgggaaaaggacttgaatgggcgcttctcaaaagaagatgcgtgaatggccagcgagggcgtgaaaagacgctcagcgttatt-----------agaagcaaatcgagaccacagggagatgccgcctcacacgcccggagggtaatcctcaaaaagacagaaactggtgttgacaagcactcgagaaataggaaccttctctgggaaagaaaatagtgcagacagaaacaatgaaaaggcgctgaaaatgagttcaacatagagtgaccccatggtccagaaatcccactcctagaagtatgtaccagataattaaaaccatacattgggccaggtgtaggggctcatgcctgtaatcccagagcactgggaggccgaggcgagcggatcacgaggtcaggagttcgagatcagcctggccaatgtggtgaaacccccgtctctactaaaagtacaaaaattagtcaggtgtggcagtgggcgcctgtaatcccagctactcgggaggccgaggcagaagaatcacttgaac--------ccgggaggcagaggttgcagtgagctgaaatcacaccactgcattccagcccgggcgacagagcaagactgt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 96308 811 - 2515279 ggaacagcctgggctggcacaagatctcactgtgctactcggaacaatgcacagttctgtgtcatattttcaggccacggctgaccacaggtaactgaaactgaggaaaccaagacaccagataagtggggcctgctgtatctgataagggactcatatacagaatatgtaaggaacacttaaaactcaaataaaataagggcaaacaaccccatgttgaaatgggaaaaggatttgaatgggcacttctcaaaagaagatgcatgaatggccagtgagggcgggaaaagatgctcagcattattagttactaggaagaagcaaatcgagaccacagggagatgccgcctcacacgccaggagggtaatcctcaaaaagacagaaactggtgttgacaaggactcgagaaataggaaccttctctgggaaagaaaatagtgcagacagaaacaatgaaaaggcactgaaaattagttcaac--agagtgaccgtatggtccagcaatcccactcctagatgtgtgtaccagataattaaaatcatacatcgggccaggcgtaggggctcatgtctgtaatcccagaatactgggaggcagaggtgagcggatcatgaggtcaggagttcgagactagcctggccaacatggagaaa-ccccgcctctactaaaaatacaaaaattagtcaggcgtagtggtgggtgcctgtaatcccagctactcgggaggccaaggcagaagaatc---------------------gagcagaggttgcagtgagccaaaatcacaccgctgcattccagcctgggtgacagagcaagactgt i manLeu1.NW_012101810v1 I 12 C 0 s colAng1.NW_012117710v1 252940 826 + 6586416 ggaatagtctgggctggcacaagatcgcactgcgctactcggaacaatgcacagttccgtgtcgtattttcaggccacggttgaccacaggtaactgaaactgaggaaaccaagacaccagatacgtggggcctgctgtatttggtaagggactcatatacagaatatgtgaggaacacttaaaactcaaataaaataagggcagacaaccccatgttgaaatgggaaaaggatttgaatgggcgcttctcaaaagaagatgcgtgaatggccagcgagggcgtgaaaagatgctcggcattattagttactaggaagaagcaaatcgagaccacagggagatgccgcctcacacgccaggagggtaatcctcaaaaagacagaaactggtgtcaacaaggacttgagaaataggaaccttctctgggaaagaaaatagtgcagaaagaaacaatgaaaaggcactgaaaatgagttcagcacagagtgaccctacggtctagcagtccctctcctagatgtgtgtaccagagaattaaaaccatacatcgggccaggcgtaggggctcacgcctgtaatcccagaacactgggaagccgaggcgagcggatcacgaggtcaggagttcgagaccagcctggctaacgtggtgaaa-ccccgtctctactaaaagtacaaaaattagtcgggcatggtggtgggcgcctgtaatcccagctactcaggaggccaaggcagaagaatcacttaaac--------ccgggaggcagaggttgcagtgagccgaaatcacaccgctgcattccggcccgggcgacagagcaagactgt i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61001638 1039 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=120274.000000 s hg38.chr7_KI270899v1_alt 98529 34 + 190869 ctca---------aaacaaacaaacaaacaaca------aaaaagtaca s panTro5.chrUn_NW_015974889v1 16994 34 + 17818 ccca---------aaacaaacaaacaaacaaca------aaaaagtaca i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 59353 34 - 432965 ctca---------aaacaaacaaacaaacaaca------aaaaagtaca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 114585 43 + 85365473 ctcaaaaacaaacaaacaaacaaacaaacaGCA------AAAAAGTACA i nomLeu3.chr20 C 0 I 307 s rheMac8.chr3 33965586 38 + 185818997 ctc----------caacaaacaaacaaacaacaacaac-aaaaaccaaa i rheMac8.chr3 C 0 I 29 s macFas5.chr3 33581929 38 + 192294377 ctc----------caacaaacaaacaaacaacaacaac-aaaaaccaaa i macFas5.chr3 C 0 I 30 s macNem1.NW_012019910v1 4343315 38 - 9440265 ctc----------caacaaacaaacaaacaacaacaac-aaaaaccaaa i macNem1.NW_012019910v1 C 0 I 31 s cerAty1.NW_012002954v1 16936203 38 - 21915920 ctc----------caacaaacaaacaaacaacaacaac-aaaaaccaaa i cerAty1.NW_012002954v1 C 0 I 28 s chlSab2.chr28 72609 38 - 21531802 ctc----------caacaaacaaacaaacaacaaaaaa-aaaaaccaaa i chlSab2.chr28 C 0 I 23 s manLeu1.NW_012101810v1 97119 38 - 2515279 ctc----------caacaaacaaacaaacaacaacaac-aaaaaccaaa i manLeu1.NW_012101810v1 C 0 I 29 s colAng1.NW_012117710v1 253766 39 + 6586416 ctc----------caacaaacaaacaaacaacaacaacaaaaaaccaaa i colAng1.NW_012117710v1 C 0 I 23 s canFam3.chr6 61002677 34 - 77573801 ctca---------gtacatgcacaagaacagtg------aaagcacata i canFam3.chr6 I 1039 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=1587139.000000 s hg38.chr7_KI270899v1_alt 98563 343 + 190869 tccaaataaaaacttgaacacaaacgtttgtagcagcaccactcataaagccaaacaatggaaacagccccgatacacgtgactggcgaatggctacagaagatgtggtgtatccgtacaacaggatgttatttggccatgaaaaagaatgaagtacttat-----aaaaaaaaagaaaaagaaaaaagaaatgaagtgctgacacaggctacaaggtggatgagcctgaaaacattatgcgaagtgaaagaagccagtcgcaaaagaccacgcactatatgtttacattttga-gaaacgtgcagaac--------ccatagatacagaaagaggatttgtggttctttagggctg s panTro5.chrUn_NW_015974889v1 17028 348 + 17818 tccaaataaaaacttgaacacaaacgtttgtagcagcaccactcataaagccaaacaatggaaacagccccgatacacgtgactggcgaatggctacagaagatgtggtgtatccgtacaacaggatgttatttggccatgaaaaagaatgaagaacttataaaaaaaaaaaaaagaaaaagaaaaaagaaatgaagtgctgacacaggctacaaggtgcatgagcctgaaaacattatgcgaagtgaaagaagccagtcgcaaaagaccacgcactatatgtttacattttga-gaaatgtgcagaac--------ccatagatacagaaagtggatttgtggttctttagggctg i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 59387 336 - 432965 tccaaataaaaacttgaacacaaacgtttgtagcagcaccactcataaagccaaacaatggaaacagccccgatacacgtgactggcgaatggctacagaagatgtggtgtatccgtacaacaggatgttatttggccatg-aaaagaatgaagtacttat-----------aaaaaaaaagaaaaaagaaatgaagtgctgacacaggctacaaggtggatgagcctgaaaacattatgcgaagtgaaagaagccagttgcaaaagaccacgcactatatgtttacattttga-gaaatgtgcagaac--------ccatagatacagaaagtggatttgtggttctttagggctg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 114935 330 + 85365473 tccaaatgaaaacttgaacacaaatgtttgtagcagcaatactcataaagccaaacaatgaaaacagccccgatacacgtgactggcgaatggctacagaagatgtggtgtatccatacaacagggtgttatttggccatgagaaagaacgaaatacttat------------------taaaaaaaaaaaatgaagtgctgacacatgctacaaggtggatgagcctaaaaacattattctaagtgaaagaaggcagtcacgaaatgccacgtactgtatgtttacattttga-gaaacgtgcagaac--------ccatagatacagaaagtggatttgtggttctttagggctg i nomLeu3.chr20 I 307 C 0 s rheMac8.chr3 33965653 337 + 185818997 tcccaataaaaacttgaacacaaatgcttgtagcagcaccacacctaaagccagacaatggaaactaccccaatacacgcaactggtgagtggctacataagatgtggtg-gtctgcacaacacgatattacttggccatgaaaaataatgaagtacttat----------taaaaaaagagaaaaaagaaacgaagtgctgacacatgctacaaggtggatgagcctgaaaacattatgccaagtgaaagaagctagtcacaaaagaccatgtcatatatgtttacactttga-gaaatgtgcagaac--------ccatagacacaggaagaagatttgtggttctttaggtctg i rheMac8.chr3 I 29 C 0 s macFas5.chr3 33581997 337 + 192294377 tcccaataaaaacttgaacacaaatgcttgtagcagcaccactcctaaagccagacaatggaaactaccccaatacacgcaactggtgagtggctacataagatgtggtg-gtctgcacaacacgatattacttggccatgaaaaataatgaagtacttat----------taaaaaaagagaaaaaagaaacgaagtgctgacacatgctacaaggtggatgagcctgaaaacattatgccaagtgaaagaagctagtcacaaaagaccatgtcatatatgtttacactttga-gaaatgtgcagaac--------ccatagacacaggaagaagatttgtggttctttaggtctg i macFas5.chr3 I 30 C 0 s macNem1.NW_012019910v1 4343384 337 - 9440265 tcccaataaaaacttgaacacaaatgcttgtagcagcaccactcctaaagccagacaatggaaactaccccaatacacgcaactggtgagtggctacataagatgtggtg-gtctgcacaacacgatattacttggccatgaaaaataatgaagtacttat----------taaaaaaagagaaaaaagaaacgaagtgctgacacatgctacaaggtggatgagcctgaaaacattatgccaagtgaaagaagctagtcacaaaagaccatgtcatatatgtttacactttga-gaaatgtgcagaac--------ccatagacacaggaagaagatttgtggttctttaggtctg i macNem1.NW_012019910v1 I 31 C 0 s cerAty1.NW_012002954v1 16936269 338 - 21915920 tcccaataaaaacttgaacacaaatgtttgtagcagcaccactcctaaagccagacaatggaaactaccccaatacacgcaactggtgagtggctacataagatgtggtgtgtctgcacaacacgatattacttggccatgaaaaataatgaagtacttat----------taaaaaaagagaaaaaagaaacgaagtgctgacacatgctataaggtggatgagcctgaaaacattacgccaagtgaaagaagctagtcacaaaagaccatgtcatatatgtttacactttga-gaaatgtgcagaac--------ccatagagacaggaagaagatttgtggttctttaggtctg i cerAty1.NW_012002954v1 I 28 C 0 s chlSab2.chr28 72670 331 - 21531802 tccaaataaaaacttgaacacaaatgtttgtagcagcaccactcctaaagccagacaatggaaactaccccaatacacgcaactggcgagcggctacataagatgtggcgtgcccgcacaacaggatattacttggccatgaaaaagaatgaagtacttat----------aaaaagaagagaaaaaagaaacgaagtgctgac-------acaaggtggatgagcctgaaaacattatgccaagtgaaagaagctactcacaaaagaccatgtcatatatgtttacactttga-gaaatgtgcagaac--------ccatagacacagaaagaagatttgtggttctttagggctg i chlSab2.chr28 I 23 C 0 s manLeu1.NW_012101810v1 97186 338 - 2515279 tcccaataaaaacttgaacacaaatgtttgtagcagcaccactcctaaagccagacaatggaaactactccaatacacgcaactggtgagtggctacataagatgtggtgtgtctgcacaacatgatattacttggccgtgaaaaataatgaagtacttat----------taaaaaaagagaaaaaagaaacgaagtgctgacacatgctacaaggtggatgagcctgaaaacattatgccaagtgaaagaagctagtcacaaaggaccatgtcatatatgtttacactttga-gaaatgtgcagaac--------ccatagacacagaaagaagatttgtggttctttaggtctg i manLeu1.NW_012101810v1 I 29 C 0 s colAng1.NW_012117710v1 253828 336 + 6586416 tccaaataaaaacttgaacacaaatgtttatagcagcaccactcctagagccaaacaatggaaacgaccccaatgcatataactggcgagcggctacataagatgtggtgtgtccgcacaacaggatattatttagccatgaaaaagaatgaagtacttat------------aacaaaaagataaaagaaatgaagtactgacacatgctacaaggtggatgagcctgaaaatattatgccaagtgaaagaagctagtcacaaaagaccatgtaatgtatgtttacactttga-gaaacgtgcagaac--------ccacagacacagaaagaagatttgtggttctttagcgctg i colAng1.NW_012117710v1 I 23 C 0 s canFam3.chr6 61002711 354 - 77573801 tttgaataacaacctgcatacagatgtttatagtagcactgtccatgaagcagagaaataaaggcaactcagtatctatcaactgatgaatggataagcaaaatatggtacagccatataatagaatattccttggccattaaaaggaattcagtacttac---agaaagaaagaaggaaaggcaagagatgtgaaaggctgggatctgctacagcatggacagaccctaaaacaccatgctcagtggaagaggccaatcgtagaagaccatgtatgacatgtttacatgtagatgaaatatccagaacaggcaaatccatagacacaaaatgtagattagtggttgcctagggttt i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 326078 1807 - 2409723 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=20509.000000 s hg38.chr7_KI270899v1_alt 98906 3 + 190869 ggg s panTro5.chrUn_NW_015974889v1 17376 3 + 17818 ggg i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 59723 3 - 432965 ggg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 115265 3 + 85365473 ggg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33965990 3 + 185818997 ggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33582334 3 + 192294377 ggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4343721 3 - 9440265 ggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16936607 3 - 21915920 ggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 73001 3 - 21531802 ggg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 97524 3 - 2515279 ggg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 254164 3 + 6586416 ggg i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 327885 3 - 2409723 gga i saiBol1.JH378296 I 1807 C 0 s canFam3.chr6 61003065 3 - 77573801 gga i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 461355 1867 - 2125214 I e calJac3.chr2 146626069 1801 - 204313951 I a score=42594.000000 s hg38.chr7_KI270899v1_alt 98909 7 + 190869 gtggggg s panTro5.chrUn_NW_015974889v1 17379 7 + 17818 gtggggg i panTro5.chrUn_NW_015974889v1 C 0 C 0 s gorGor5.CYUI01015914v1 59726 7 - 432965 gtggggg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 115268 7 + 85365473 gtggggg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33965993 7 + 185818997 ctggggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33582337 7 + 192294377 ctggggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4343724 7 - 9440265 ctggggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16936610 7 - 21915920 ctggggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 73004 7 - 21531802 gtcgggg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 97527 7 - 2515279 ctgggag i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 254167 7 + 6586416 gtggggg i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 327888 7 - 2409723 gtAGGGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 463222 7 - 2125214 gtGGGGG i cebCap1.NW_016107703v1 I 1867 C 0 s canFam3.chr6 61003068 7 - 77573801 ggagggg i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e calJac3.chr2 146626069 1801 - 204313951 I a score=1358725.000000 s hg38.chr7_KI270899v1_alt 98916 190 + 190869 cagggctggtggctgagagtagctaaagggtgtggagttt-----ctttttgaggtggtgaaaattttctaaaattgactgtagtaatggctgtagaactctgtgaatatactgaaaaccattgtacactttaaatgggtgaattgcatggtatgtgaattataacccagtaaagctgttTAAAAaatagtgggg s panTro5.chrUn_NW_015974889v1 17386 190 + 17818 cagggctggtggctgagagtagctaaagggtgtggagttt-----ctttttgaggtggtgaaaattttctaaaattgactgtagtaatggctgtagaactctgtgaatatactgaaaaccattgtacactttaaatgggtgaattgcatggtatgtgaattataacccagtaaagctgtttaaaaaATAGTGGGG i panTro5.chrUn_NW_015974889v1 C 0 N 0 s gorGor5.CYUI01015914v1 59733 189 - 432965 cagtgctggtggctgagagtagctaaaggg-gtggagttt-----ctttttgaggtggtgaaaattttctaaaattgactgtagtaatggctgtagaactctgtgaatatactaaaaaccattgtacactttaaatgggtgaattgcatggtatgtgaattataacccagtaaagctatttaaaaaATAgtgggg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 115275 190 + 85365473 cagtgctggtggctgagagtatctaaaacgtatggagttt-----ctttttgaggtggtgaaaattttctaaaattgactgtagtaacggctgtagaagtctgtgaatatactaaaaaccactgtacactttaaatgggtgaattgcatggtatgtgaattataacccaataaagctgtttaaaaaATAGTGGGg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33966000 188 + 185818997 tagtgctggtgcctgtgagtagctaaagggtacggagttt-----ctttttgaggtggtgaaaatttttaaaaattgcctgtagtaatggctgtagaactc--tgaatatactgaaaacaactgtacactttaaatgggtgaaatgcatggcatgtgacttataacccaataaagctatttaaaaaATAGtggga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33582344 188 + 192294377 tagtgctggtgcctgtgagtagctaaagggtacggagttt-----ctttttgaggtggtgaaaatttttaaaaattgcctgtagtaatggctgtagaactc--tgaatatactgaaaacaactgtacactttaaatgggtgaaatgcatggcatgtgaattataacccaataaagctgtttaaaaaATAGTGGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4343731 188 - 9440265 tagtgctggtgcctgtgagtagctaaagggtacggagttt-----ctttttgaggtggtgaaaatttttaaaaattgcctgtagtaatggctgtagaactc--tgaatatactgaaaacaactgtacactttaaatgggtgaaatgcatggcatgtgaattataacccaataaagctgtttaaaaaATAGTGGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16936617 188 - 21915920 tagtgccggtgcctgtgagtagctaaagggtacggagttt-----ctttttgaggtggcaaaaatttttaaaaattgcctgtagtaatggctgtagaactc--tgaatatactgaaaacaactgtacactttaaatgggtgaaatgcatggcatgtgaattataacccaataaagctgtttaaaaaATAGtggga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 73011 188 - 21531802 tagtgctggtgcctgtgagtagctaaagggtatggagttt-----ctttttgaggtggtgaaaatttttaaaaattgcctgcagtaatggctgtagaactc--tgaatatactgaaaacgactgtacactttaaatgggtgaaatgcatggcatgtgaattataacccgataaagctgtttaaaaaACAGTGGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 97534 188 - 2515279 tagtgccggtgcctgtgagtagctaaagggtacggagttt-----ctttttgaggtggcgaaaatttttaaaaattgcctgtagtaatggctgtagaactc--tgaatatactgaaaacaactgtacactttaaatgggtgaaatgcatggcatgtgaattataacccaataaagctgtttaaaaaATAGtggga i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 254174 188 + 6586416 tagtgccggtgcctgtgagtagctaaagggtatggaattt-----ctttttgaggtggtgaaaatttttaaaaattgcctgtagtaatggctgtagaactc--tgaatatactaaaaaccactgtacactttaaatgggtgaaatgcatggcgtgtgaattataacccaataaagctgtttaaaaaATAGtggga i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146627870 189 - 204313951 CAGTGCTGGTGGCTGGGAATAgctaacagatatggagttt-----ctctttgaggtggtgaaaattttctaaaaatttctgtagtaatggtcgtagaactctgtgaatatcctaaaagccattgtacactttaaatgggtgaattgcatggtatgtgaattataacccactaaagctgttt-aaaTATAGTGGGG i calJac3.chr2 I 1801 C 0 s saiBol1.JH378296 327895 189 - 2409723 TAGCACTGGTGGCTgggagtagctaacgagtatggagttt-----ctcttcgaggtggtgaaaattttctaaaattcactgtagtaatggtcgtagaactctgtgaatacactaaaagccattgtacactttaaatgggtgaattgcacagtatgtgaattataacccagtaaagctgttt-aaaTATAGTGGGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 463229 189 - 2125214 TAGCACTGGTGGCTAggagtagctaacaggtatggagttt-----ctctttgaggtggtgaaaattttctaaaattgactttagtaatggtcatagaactctgtgaatatactagaagccattgtacactttaaatgggtgaattgcacggtatgtgaattataacccagtaaagctgctt-aaaTATAGTGGGG i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61003075 125 - 77573801 -cttgctgggggcagggagtagctaaaaggtttgaaggtgaagaaaatgttgaggtgaagaaaatgttctaaaa----ctgtggtgattgttgcacatatctgtgagtgcactaa-----attgtgcactttaaa------------------------------------------------------------ i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=705288.000000 s hg38.chr7_KI270899v1_alt 99106 120 + 190869 ggcgggtggagggaatgaagagaaggtggttaatgggtacgaataaacggtttggtaggaggggtgagttctagtgttgataacacagtgaggggattatagttaacaacaacatactgt s gorGor5.CYUI01015914v1 59922 120 - 432965 ggcgggtggagggaatgaagagaaggtggttaatgggtacgaataaacggtttggtaggacgggtgagttctagtgttgatagcacagtgaagggattatagttaacaacaacatactgc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 115465 118 + 85365473 ggcgggtggggcgaatgaagagaaggtggttaatgggtacgaataaacagttcggtaggaggggtgagttccagtgtcgatagcacagtgacgggattacagttaacaacagcatact-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33966188 120 + 185818997 agcatgtggagggaatgaagagaaggtggttaacgggtacgaataaatagtttggtaggaggggtgggttctagtgttgacagcacagtgaggggattatagttaacaacaacatactgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33582532 120 + 192294377 AGCATGTggagggaatgaagagaaggtggttaacgggtacgaataaatagtttggtaggaggggtgggttctagtgttgacagcacagtgaggggattatagttaacaacaacatactgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4343919 120 - 9440265 AGCATGTggagggaatgaagagaaggtggttaacgggtacgaataaatagtttggtaggaggggtgggttctagtgttgacagcacagtgaggggattatagttaacaacaacatactgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16936805 120 - 21915920 agcatgtggagggaatgaagagaaggtggttaacaggtacgaataaatagtttggtaggaggggtaggttctagtgttgacagcacagtgaggggattatagttaacaacaacatactgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 73199 120 - 21531802 AGCGTGTggagggaatgaagagaaggtggttaacgggtacgaataacccgtttggtaggaggggtgggttctggtgttgacagcacagtgaggggattatagttaacaacaacatactgt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 97722 120 - 2515279 agcatgtggagggaatgaagagaaggtggttaacaggtatgaataaatagtttggtaggaggggtgggttctagtgttgacagcacagtgaggggattatagttaacaacaacatactgt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 254362 120 + 6586416 agcgtgtggagggaatgaagagacggtggttaatgggtacgaataaacagtttggtaggaggggtgggttctagtgttgacggcacagtgaggggattatagttaacaacaacatactgt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146628059 119 - 204313951 GACAggtagagggaatgaggagaagttgg-taatgggtacaaataaatgatttggtaggaggagtgagttctagtgttgccagcaaaatgaggggactatagttaacagcaacgtactgt i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 328084 120 - 2409723 GACAGGTggagggaaggaagagaagttggttgatgagtacgaataaactatttggtaggaggagtgagttctagtgttgccagcacaatgagggaactgtagttaacagcaacacactgt i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 463418 120 - 2125214 GACAAGTggagggaatgaagagaagttggttaatgggtacgaataaaccatttggtaggaggagtgagttctagtgttaccagcacaatgaggggactgtagttaatagcaacatactgt i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61003200 28 - 77573801 ---------tgggaa-----------------------atggatgaattgtgtggt------------------------------------------------------------ctgt i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=756423.000000 s hg38.chr7_KI270899v1_alt 99226 138 + 190869 atattttgaaatagcgagaagaaaagatttgaaatgttcccaacatgaagaaaggatagacgttcgaggtgatgaacgtcctaaataccccaattccatcattacacatgg--catgcgcgtatccaaatatctcatg---------------------------------------------------------------------------------ca s gorGor5.CYUI01015914v1 60042 138 - 432965 atattttgaaatagcgagaagaaaagatttgaaatgttcccaacatgaagaaaggatagacgttcgaggtgatgaacgtcctaaataccccaattccatcattacacatgg--catgtgcgtatcaaaatatctcatg---------------------------------------------------------------------------------ca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 115583 138 + 85365473 atgtttcgaaataacgagaagaaaatatttgaaatgttcccaacatgaagaaaggacagacgttcaaggtgatggacaccctaaataccccgattccattattacgcatgg--catgcgcgtatcagaatatcacatg---------------------------------------------------------------------------------ca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33966308 138 + 185818997 atgtttcaaaatagcgagaagaaaagatttgaaatgttcccagcatgaaggaaggacagacatttgcggtgatgaacatcctaaataccccgattccatcgctacacaggg--catgtgcatgtcaaaataccacatg---------------------------------------------------------------------------------ca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33582652 138 + 192294377 atgtttcaaaatagcgagaagaaaagatttgaaatgttcccagcatgaaggaaggacagacgtttgcggtgatggacatcctaaataccccgattccatcgctacacaggg--catgtgcatgtcaaaataccacatg---------------------------------------------------------------------------------ca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4344039 138 - 9440265 atgtttcaaaatagcgagaagaaaagatttgaaatgttcccagcatgaaggaaggacagacgtttgcggtgatggacatcctaaataccccgattccatcgctacacaggg--catgtgcatgtcaaaataccacatg---------------------------------------------------------------------------------ca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16936925 135 - 21915920 atgtttcaaaatagtg---agaaaagatttgaaatgttcccagcatgaaggaaggacagacattcgcggtgatggacgtcctaaataccccgattccatcgctacacaggg--catgtgcatgtcaaaatatcacatg---------------------------------------------------------------------------------ca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 73319 219 - 21531802 atgtttcaaaatagcgagaagaaaagatttgaaatgttcccagcgtgaacgaaggacagacgttcgcggtgatggacgtcctaaataccccgattccatcattacacaggg--catgcgcatgtcaaaatatcacaggcaccctataaatatgtaacatgttatgcatcgataaacaattaaaaaTACAAGCATCGCATAGTGTCTTCCTTCCAAATATCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 97842 138 - 2515279 atgtttcaaaatagtgagaagaaaagatttgaaatgttcccagcatgaaggaaggacagacgttcgcggtgatggacgtcctaaataccccgattccatcgctacacaggg--catgtgcatgtcaaaatatcacatg---------------------------------------------------------------------------------ca i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 254482 139 + 6586416 atgtttcaaaatagcgagaagaaaagatttgaaatgttcccagcatgaaggaaggtcagacgttcgcggtgatggacgtcctaaata-cccgattccatcactacacagggtatatgcgcgtatcaaaatatcacgtg---------------------------------------------------------------------------------ca i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146628178 137 - 204313951 atgtttcaaaatagcaagaagaaaacatttgaaatgttaccaacatgaataaaagat-gatgttcgaggtgatggagatcctaaataccccgattccatcattacgcattg--catgagagtatcaatgtatcacatg---------------------------------------------------------------------------------ca i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 328204 137 - 2409723 atgtttcaaaatggcaagaagaaaagatttgaaatgttcccaacatgaagaaaggag-gacgttcgaggtgatggagatcctaaataccccgattccatcactacacatcg--cgcaggcatatccatctatcacatg---------------------------------------------------------------------------------ca i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 463538 137 - 2125214 atgtttcaaagtggcaagaagaaaagatgtgaaatgttcccaacatgaagaaaggat-gtcgttcgaggtgatggagatcctaaataccccgattccatcactacacattg--catggccatatcaatgtatcacatg---------------------------------------------------------------------------------ca i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e canFam3.chr6 61003228 0 - 77573801 C e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=3832048.000000 s hg38.chr7_KI270899v1_alt 99364 661 + 190869 ccccataaatatgtaaaatgttatgcatcaataaacaaTTAAaggtataagcg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ttgcagagtgtcttccttccaaataatacagtatg-aaaagggaaaaagagcaactttacagtggagaaaactggaaacctctgcctcagc-cacatcgccgaggttgacatcaccggtgacaagtcacgcagacagcaaggacgttg----gtgtgatgctgtgggaaggtcactttcca----------tcctccccacaacccgtgaccccaaactaatcacaggaaaaaga-tcagacaagtcccaaatgagggacattccacaaaatacccaaccagtcctcctcaaaactgtcaggatcactaaaaataaggaaagtctgagaatctgtcacagct---gcgagggccctaaggagacatgagggccaactgtaacatcatactttgg-----attctgaggtagaaaatggatattaagggaaaactgagg--gaatgtgaataaagtatggactttagttcctactac--tg-tatcgacatgggctaattcactgtgacaaa-ggtacagtataatgtgacagggtaagagtaggggaacctgggtgtggagtatacagg---aactctgtgctatcatcacaatttttctttatatctaacaatgttctaaaat--gaagtttattttaaaaaT s gorGor5.CYUI01015914v1 60180 655 - 432965 cctcataaatatgtaaaatgttatgcatcaataaacaaTTAAaagtataagca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ttgcatagtgtcttccttccaaataatacagtatg-aaa-gggaaaaagagcaactttacagtggagaaaactggaaacctctgcctcagc-cacatcgccgaggttgacatcaccggtgaccagccacgcagacagcaaggaccttg----gtgtgatgctgtgg-aaggtcactttcca----------tc-tccccacaacccgtgaccc-aaactaatcacaggaaaaagaatcagacaagtcccaaatgagggacattctacaaaatacccaaccagtcctcctcaaaactgtcgagatcaccaaaaataaggaaagtctgagaatctgtcacagct---acgagggccctaaggagacatgagggccaactgtaacatcatactttgg-----attctgaggtagaaaatggatattaagggaaaactgagg--gaatctgaataaagtatggactttagttcctactac--tg-tatcgacatgggctaattcactgtgacaaa-ggtacagtataatgtgacagggtaagagtaggggaacctgggtgtggagtatacagg-----ctctgtgctatcatcacaatttttctttatatctaacaatgttctaaa-t--gaagtttattttaaaaaT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 115721 666 + 85365473 ccccataaatatgtaaaatgttatgcatcaataaacaattaaaaaTATAAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTgcatagtgtcttccttccaaataatatggtatg-aaaagggaaaaagagcaactttacagtggagaaaactggaaacctctgcctcagc-cacatcgccgaggttgacatcactggtgacaagtcaggcagacagcaaggaccttg----gtgtgatgctacgggaacggcactttcca----------tcctccccacaacccatgaccccaaactaatcttaggaaaaaga-tcaggcaagtcccaaatgagggacattctacaaaatacccaaccattcctcctcaaaactgtcaagatcaccaaaaatagggaaagtctgagaatctgtcacagct---atgagggccctaaggagacatgaggaccaactgtaacatcatactttgg-----actctgaggtagaaaatggatattaagggaaaactgggg--gaatctgaataaagtatggactttagttcctactactata-tatcaacatgggctaattcactgtgacaaa-aatacaataaaatgtgacatggtaagagtaggggaacctgggtgtggagtataaaggaagaactctgtgctatcatcacaatttttctttatatctaacaatgttctaaaat--gaagtttattttaaaaaT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33966446 742 + 185818997 ccctataaatatgtaaaatgttatgcatcaataaacaattaaaaaTATAAGCATTGCATAGTGTCTTCCTTCCAAATACTACT-------------------------------------------------CTATAAATATGAAAAATGTTATGCATCAATAAACAATTAAaaatataagca--------------------------------------------------ttgcatagtgtcttccttccaaataccatagtatg-aaaagggaaaaag-gtaattttacagtggagaaaactggaaacctctgcctcagc-cgcatcaccgaggttgacgtcaccactgacaagccacgcaggcagcaaggaccttg----gtgtgaggccgtgggaagggtgctttcca----------tcctccctacagcctgtgaccccgaactcatcacaggaaagagg-tcagacaagtcccaaatgagggacattctacaaaatactcaaccagtcctcctcaaaactgtcaagatctccaacaataaggaaagtctgagactctgtcacagttacaacgagggccctaaggagactcgaggaccaactctaacatcatcctttggatgggattctgaggtag-aaatggatattaagggaaaactgtgg--aaatctgaataaggtatggactttagttcctcctac--ta-tatcaacatgggctaattcactgtgaccaa-ggtacaatataatgtaacacggtaacagtaggggaacctcggtgtggagtgcacagg---aactctgtgctatcatcaccatttttctgtatatctaacactgctctaaaat--gaagtttatttt------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33582790 742 + 192294377 ccctataaatatgtaaaatgttatgcatcaataaacaattaaaaaTATAAGCATTGCATAGTGTCTTCCTTCCAAATACTACCCTATAAATATGAAAAATGTTATGCATCAATAAACAATTAAaaatataagc-------------------------------------------------a--------------------------------------------------ttgcatagtgtcttccttccaaataccatagtatg-aaaagggaaaaag-gtaactttacagtggagaaaactggaaacctctgcctcagc-cgcatcaccgaggttgacgtcaccactgacaagccacgcaggcagcaaggaccttg----gtgtgaggccgtgggaagggtgctttcca----------tcctccctacagcctgtgaccccgaactcatcacaggaaagagg-tcagacaagtcccaaatgagggacattctacaaaatactcaaccagtcctcctcaaaactgtcaagatctccaacaataaggaaagtctgagactctgtcacagttacaacgagggccctaaggagactcgaggaccaactctaacatcatcctttggatgggattctgaggtag-aaatggatattaagggaaaactgtgg--aaatctgaataaggtatggactttagttcctcctac--ta-tatcaacatgggctaattcactgtgaccaa-ggtacaatataatgtaacacggtaacagtaggggaacctcggtgtggagtgcacagg---aactctgtgctatcatcaccatttttctgtatatctaacactgctctaaaat--gaagtttatttt------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4344177 661 - 9440265 ccctataaatatgtaaaatgttatgcatcaataaacaattaaaaaTATAAGC----------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------TTgcatagtgtcttccttccaaataccatagtatg-aaaagggaaaaag-gtaactttacagtggagaaaactggaaacctctgcctcagc-cacatcaccgaggttgacgtcaccactgacaagccacgcaggcagcaaggaccttg----gtgtgaggccatgggaagggtgctttcca----------tcctccctacagcctgtgaccccgaactcatcacaggaaagagg-tcagacaagtcccaaatgagggacattctacaaaatactcaaccagtcctcctcaaaactgtcaagatctccaacaataaggaaagtctgagactctgtcacagttacaacgagggccctaaggagactcgaggaccaactctaacatcatcctttggatgggattctgaggtag-aaatggatattaagggaaaactgtgg--aaatctgaataaggtatggactttagttcctcctac--ta-tatcaacatgggctaattcactgtgaccaa-ggtacaatataatgtaacacggtaacagtaggggaacctcggtgtggagtgcacagg---aactctgtgctatcatcaccatttttctgtatatttaacactgctctaaaat--gaagtttatttt------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16937060 737 - 21915920 ccctataaatatgtaaaatgttatgcatcaataaacaattaaaaaTATAAGCATTGCATAGTGTCTTCCTTCCAAATACTACC---------------------------------------------------------------------------------------------------CTATAAATATGAAAAATGTTATGCATCAATAAACAATTAAaaatataagcattgcatagtgtcttccttccaaataccatagtatg-aaaaggggaaaag-gtaactttacagtggagaaaactggaaacctctgcctcagc-cgcatcaccgaggttgacgtcaccgctgacaagccacgcaggca-----gaccttg----gtgtgaggcagtgggaagggtgctttcca----------tcctccccacagcctgtgaccccgaactcatcacaggaaagagg-tcagacaagtcccaaatgagggacattctacaaaatactcaaccagtcctcctcaaaactgtcaagatctccaacaataaggaaagtctgagactctgtcacagttacaacaagggccctaaggagacgcgaggaccaactctaacatcatcctttggatgggattctgaggtag-aaatggatattaagggaaaactgcag--aaatctgaataaggtatggactttagttcctcctac--ta-tatcaacatgggctaattcactgtgaccaa-ggtacaatataatgtaacacagtaacagtaggggaacctcagtgtggaatgcacagg---aactctgtgctatcatcaccatttttctgtatatctaacactgctctaaaat--gaagtttatttt------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 73538 657 - 21531802 CCCTATAAATATGTAACATGTTATGCATCAATAAACAATTAAAAATACAAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTgcatagtgtcttccttccaaataccatagtatg-gaaagggaaaaag-gtaactttacagtggaggaaactagaagcctctgcctcagc-tgcatcgccgaggttgacgtcagcgctgacgagccacgcaggcagcaaggaccttg----gtgtgaggccgtgggaaggg-gctttcca----------tgctccccacagcctgtgaccccgaactcatcataggaaagagg-tcagacaagtcccaaatgagggacattctacaaaatacccaaccagtcctcctcaaaactgtcaagatctccaacaatgaggaaagtctgaggctctgtcacagct---acgagggccctaaggagacgcgaggaccaactctaacatcgtcctttggatggaattctgaggtag-aaatggatattaagggaaaactgagg--aaatctgaataaggtacggactttagttcctcctac--ta-tatcaacatgggctaattcactgtgaccaa-ggtacaacataatgtaacacggtaacagtaggggaacctcggtgtggagtgcacagg---aactctgtgctatcatcaccatttttctgtatatctaacactgttctaaaat--gaactttatttt------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 97980 738 - 2515279 ccctataaatatgtaaaatgttatgcatcaataaacaattaaaaaTATAAGCATTGCATAGTGTCTTCCTTCCAAATACTACC---------------------------------------------------------------------------------------------------CTATAAATATGAAAAATGTTATGCATCAATAAACAATTAAaaatataagcattgcatagtgtcttccttccaaataccatagtatg-aaaaagggaaaag-gtaactttacagtggagaaaactggaaacctctgcctcagc-cgcatcaccgaggttgacgtcaccgctgacaagccacgcaggca-----gaccttg----gtgtgaggccatgggaagggtgctttcca----------tcctccccacagcctgtgaccccgaactcatcacaggaaagagg-tcagacaagtcccaaatgagggacattctacaaaatactcaaccagtcctcctcaaaactgtcaagatctccaacaataaggaaagtctgagactctgtcacagttacaacgagggccctaaggagacgcgaggaccaactctaacatcatcctttggatgggattctgaggtag-aaatggatattaagggaaaactgcag--aaatctgaataaggtatggactttagttcctcctac--tattatcaacatgggctaattcactgtgaccaa-ggtacaatataatgtaacacggtaacagtaggggaacctcggtgtggagtgcacagg---aactctgtgctatcatcaccatttttctgtatatctaacactgctctaaaat--gaagtttatttt------ i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 254621 658 + 6586416 ccctataaatacgtaaaatgttatgcatcaataagcaattaaaaatataagca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ttgcatagtgtcttccttccaaatgccatcgtatg-gaaagggaaaaag-gtaactttatagtggagaaaactgggaacctctgcctcagc-cgcagcaccaaggttgacgtcgccgctgacatgccacgcaggcagcaaggaccttg----gtgtgatgccatgggaagggtgctttcca----------tcctctccacggcctgtggccccaaactcatcataggaaagagg-tcagacaggtctcaaatgagggacattctacaaaatacccaaccagtcctcctcaaaactgtcaagatctccaacaataaggaaagtctgagactctgtcacagct---acaagggccctaaggagacacgaggaccgactctaacatcatcctttggatgggattctgaggtag-aaatggatgttaagggaaaactgagg--aaatctgaataaggtacgggctttagttcctcctac--ta-tatcaacatgggctaattcactgtggccaa-ggtacaatctaatgtaacacggtaagaataggggaacctcggtgtggagtgcacagg---aactctgtcctatcatcaccacttttctgtatatctaactctgctctaaaat--ggactttatttt------ i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146628315 669 - 204313951 ccccataagtatgtaaaatattatgcatcaataaacaattaaaaaTATAAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTgcatagtgtcttccttccaaagaatatagcatg-aaaggaaaaaata-gtaactttacagtggagagaactggaaatctctgcctcactcaacctcgccgaggttgacatcactggtaacaagtcatgcagacagcaaggaccttg----atgtgatgcagtgggaagggtgctttccatctgtgcccctcctcccaacaacacatgaccccaagctaatc--agaaaaaaga-tcagacacatcccaaatgagggacattctacaaaataaccaacaagttctcctcaaaactgtcaagatcaccaaaaacaagggaagtctgagaatctgtcacagct---ataggggccctaaggaaatatgaggaccaactacaacatcatactt--aatgggattctgaggaag-aaaaggacattaatggaaaactgagg--aaatctgaaaaaagtatgggttttagttcctactac--ag-tatcaacatgggctaattcactgtgacaaa-gttccaatataatgtgacatggtgagaacaggggaacgttggtgtggagtgtagagg---aacac--tgctaccatcacaatttttttgtaaatgtaaaactattctaaaat--gaagcttattttaaaaaT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 328341 656 - 2409723 ccgcataagtatgtaaaatattatgcatcaataaacaaTTAAaagtataagca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ttgcatagtgtcttccttccaaagaagagagcatg-aaaagggaaaata-gtaactttgcagtggagagaactggaaatctctgcctcaag-----tcgctgaggttgacgtcaccagtgacaagtcacgcagacagcaaggaccttg----atgtgatgcagtgggaagggtgctttccatctgtgcccttcctcccaacaacacgtgaccccaagctaatc--agaaaaaaga-tcagacacatcccaaatgagggacattctccaaaatacccgactagttctcctgaaaactgtcaagatcaccaaaaacaagg--agtctgaga--ctgttacagct---aggggggccctaaggaaac---aggaccaactacaacatcacactt--aatgggattctgaagaac-gaaaggacattaagggtaaactgagg--aaatctgaacaaagtatgggttttagttcctactac--ag-tatcaacatgggctaattcactgtgacaaa-ggtccaatataatgtgacatggtgagagcaggggaacgttggtgcggagtgtagagg---aaggctgtgctaccgtcacaatttttctgtaaatgtaaaactattctcaaat--gaagcttattt---aaaa i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 463675 628 - 2125214 ctgcataagtatgtaaaatattatgcatcaataaacaattaaaaaTATAAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTgcatagtgtcttccttccaaagaatatagcatgaaaaggaaaaaata-gtaactttacagtggagagaactggaaatctctgcctcacc-----tcgccgaggttgacatcaccggtgacaagtcacgcaggaagcaaggaccttg-------------------------------------------tcctcccaacaacacgtgacctcaagctaatc--agaaaaaaga-tcagacacatcccaaatgagggacattctacaaaatacccgaccagttctcttcaaaactgtcaagatcaccaaaaacaagcaaagtctgagaatctgtcacagct---atgggagccctaaggaaacatgaggaccaactacaacatcatactt--aatgggattctgaggaag-aaaaggacattaagggaaaactgagg--aaatctgaacaaagtatgggctttagttcctactac--ag-tatcaacatgggctaattcactgtgacaaa-ggtccaatataatgtgacatggtgagagcagggaaacattggtgtggagtgtagagg---aacgctgtgctaccatcacaatttttctgtaaatgtaaaactattctaaaat--gaagcttattttaaaaaT i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61003228 645 - 77573801 ctcaataaagctgtg------------------------taaaaaTAAAGGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTgcataatgactgcctcccaaaaagtacagtata-aaaggggggaatgaatagcttcacagtggagaactcagacagacatgacctcagt-caagtggccaaggtc-atgtccagagtgatgagtcatgttgatagcaaagaccctgcctgatagggcgcagtgagaatgctgcttcacttctgtggtctgcctcccaaaaatccaca--cccagcataatcctaagaagaaca-tcagacaaattctgactgaggtacagt---caaaatacctgacca-tcttcctttaaactgtgacgattaccaaaaa-gtgggaagtctgagaatctgtcacagcc---aagagacctctaaggagatatgatgactaactggaaggtggtagtttggatag-atcttgggatagaaaaaggacattaaggaaaaagcaaggaaaaatctgaatgaagtgtggacttcagttaataatag--ta-tatcaatactggttaactaattatgaaaaacgggccattctaaagtaagatattaataatagaggagcctggatgtgaagtacatgag---aagtgattgtcatca-------ttttctctaaatctaaagatactaaaaaattagaattctctttaaaaaAT i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2187721 9492 - 8137123 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=564153.000000 s hg38.chr7_KI270899v1_alt 100025 77 + 190869 --AAAAAATAAAGACAGGGGTCCTTGATATCAATAAACCCCATGAAAATACATTCATTAATAATCAGGGAAGCACCTCC s gorGor5.CYUI01015914v1 60835 77 - 432965 --AAAAAATAAAGACAGGGGTCCTTGATATCAATAAACCCCATGAAAATACATTCATTAATAATCAGGGAAGCACCTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116387 77 + 85365473 --AAAAAATAAAGACAGGGCTCCCTGATATCAATAAACCCCATGAAAATACACTCATTAATAATAAAGGAAGCACCTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33967188 76 + 185818997 ---aaaaaTAAAGACAAGGCTCCTTGATATCAATAAACCCCATGAAAATACATTCATGAATAATCAGGGAAGCACCTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33583532 76 + 192294377 ---aaaaaTAAAGACAAGGCTCCTTGATATCAATAAACCCCATGAAAATACATTCATGAATAATCAGGGAAGCACCTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4344838 76 - 9440265 ---aaaaaTAAAGACAAGGCTCCTTGATATCAATAAACCCCATGAAAATACATTCATGAATAATCAGGGAAGCACCTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16937797 76 - 21915920 ---aaaaaTAAAGACAAGGCTCCTTGATATCAATAAACCCCATGAAAATACATTCATGAATAATCAGGGAAGCACCTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 74195 76 - 21531802 ---aaaaaTAAAAACAAGGCTTCTTGATATCAATAAACCCCATGAAAATACATTCATGAAAAATCAGGGAAGCACCTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 98718 76 - 2515279 ---aaaaaTAAAGTCAAGGCTCCTTGATATCAATAAACCCCATGAAAATACATTCATGAATAATCAGGGAAGCACCTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 255279 76 + 6586416 ---aaaaaTAAAGACAAAGCTCCTTGATATCAATAAACTCCATGAAAATACATTCATGAATAATCAGGGAAGCACCTCC i colAng1.NW_012117710v1 C 0 I 110 s calJac3.chr2 146628984 76 - 204313951 --AAAAAATGAAGATGGGG-TCTTTGATATCAATAAACCCCATGAAAATACATTCATTAATAGTGAGGGAGGCACCACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 328997 76 - 2409723 --aaaAAATGAAGATGGGG-TCCTTGATATCAATAAACCCCATGAAAATACATTCATTAATAATGAGGGAAGCACCTCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 464303 76 - 2125214 --AAAAAGTGAAGATGGGG-TCCTTGATATCAATAAACCCCATGAAACTACATTCATTAATAATGAGGGAAGCACCTCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2197213 74 - 8137123 --aaaaaaaaaaGTCAGGGCCCCCTGATATCAATAAACCCTGTGAAAATGCACTTATTAATGATCAAGGAAGGACC--- i otoGar3.GL873611 I 9492 C 0 s canFam3.chr6 61003873 78 - 77573801 TTTTAAAATAAATGCAGGGCTCTCTGATATCAATAAGCCTCATGAAAATGAATTCATTAATAATCAGGAAAAATCCTC- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=8763.000000 s hg38.chr7_KI270899v1_alt 100102 5 + 190869 C-------------------CCAG s gorGor5.CYUI01015914v1 60912 4 - 432965 C-------------------C-AG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116464 5 + 85365473 C-------------------CCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33967264 5 + 185818997 C-------------------CCAG i rheMac8.chr3 C 0 I 10 s macFas5.chr3 33583608 5 + 192294377 C-------------------CCAG i macFas5.chr3 C 0 I 27 s macNem1.NW_012019910v1 4344914 5 - 9440265 C-------------------CCAG i macNem1.NW_012019910v1 C 0 I 10 s cerAty1.NW_012002954v1 16937873 5 - 21915920 C-------------------CCAG i cerAty1.NW_012002954v1 C 0 I 700 s chlSab2.chr28 74271 5 - 21531802 C-------------------CCAG i chlSab2.chr28 C 0 I 462 s manLeu1.NW_012101810v1 98794 5 - 2515279 C-------------------CCAG i manLeu1.NW_012101810v1 C 0 I 496 s calJac3.chr2 146629060 24 - 204313951 TGCACATTCACACCTGTGAACAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 329073 5 - 2409723 T-------------------CAAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 464379 5 - 2125214 C-------------------CCAG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2197287 5 - 8137123 C-------------------CCAA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e canFam3.chr6 61003951 0 - 77573801 C e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=8829.000000 s hg38.chr7_KI270899v1_alt 100107 14 + 190869 CA-------CA-TGTGCATATG s gorGor5.CYUI01015914v1 60916 14 - 432965 CA-------CA-TGTGCATATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116469 14 + 85365473 CA-------CA-TGTGCATATG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33583640 15 + 192294377 CA-------CAGTGCGCACATG i macFas5.chr3 I 27 I 1 s calJac3.chr2 146629084 21 - 204313951 CACTCAACCCA-AGCACACATG i calJac3.chr2 C 0 I 1 s saiBol1.JH378296 329078 14 - 2409723 TA-------CA-AGTGCACACG i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 464384 14 - 2125214 TA-------CA-AGTGCACATG i cebCap1.NW_016107703v1 C 0 I 551 s otoGar3.GL873611 2197292 9 - 8137123 CA-------CA-TGTGT----- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61003951 6 - 77573801 ---------AA-TGTG------ i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 98799 496 - 2515279 I e cerAty1.NW_012002954v1 16937878 700 - 21915920 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=-2181.000000 s hg38.chr7_KI270899v1_alt 100121 23 + 190869 acacccatgcacaca--ctcaa----------------------------gca s gorGor5.CYUI01015914v1 60930 28 - 432965 ACACCCAGGCACACA--CTCAA-----------------------CTCAAGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116483 20 + 85365473 acacccaggcacaca--ctcaa------------------------------- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33583656 51 + 192294377 ACACACACGCACATA--CCCAATCCATGCATGCACACATGCGCAACCCAAaca i macFas5.chr3 I 1 C 0 s calJac3.chr2 146629106 30 - 204313951 ACACTTGTGCACACACACTCAA-----------------------CCCAAGCA i calJac3.chr2 I 1 C 0 s saiBol1.JH378296 329093 26 - 2409723 ACACCTGTGcacaca----caa-----------------------cccaagca i saiBol1.JH378296 I 1 C 0 s otoGar3.GL873611 2197301 3 - 8137123 --------GCA------------------------------------------ i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61003957 18 - 77573801 -CCTGCATGCACACA--GACA-------------------------------- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 98799 496 - 2515279 I e cerAty1.NW_012002954v1 16937878 700 - 21915920 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 464398 551 - 2125214 I a score=-2194.000000 s hg38.chr7_KI270899v1_alt 100144 4 + 190869 c--acg s gorGor5.CYUI01015914v1 60958 4 - 432965 C--ATG i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33583707 4 + 192294377 c--gtg i macFas5.chr3 C 0 C 0 s calJac3.chr2 146629136 3 - 204313951 T---TG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 329119 6 - 2409723 cacatg i saiBol1.JH378296 C 0 C 0 s canFam3.chr6 61003975 4 - 77573801 --CACG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e otoGar3.GL873611 2197304 0 - 8137123 C e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 98799 496 - 2515279 I e cerAty1.NW_012002954v1 16937878 700 - 21915920 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 464398 551 - 2125214 I e nomLeu3.chr20 116503 0 + 85365473 C a score=28852.000000 s hg38.chr7_KI270899v1_alt 100148 59 + 190869 tgcacatg---------acacccaggca------cacactcaacccaagcacat--------gtgcacatgcacac-------------------ctgtgc s gorGor5.CYUI01015914v1 60962 59 - 432965 TGCACATG---------ACACCCAGGCA------CACACTCAACCcaagcatgt--------gcatacatgcacac-------------------tcatgc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116503 31 + 85365473 -------------------------------------------cccaagcacgt--------gcatacatgcacac-------------------tcatgc i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33583711 87 + 192294377 cacacatgcacacatgcacacatgcaca------caCACTCAATCCAAGCACGT--------GCACATGCACACACACGCACATACCCAATCCATGCATGC i macFas5.chr3 C 0 C 0 s calJac3.chr2 146629139 60 - 204313951 CATACATG--------CACACCCATGCA------TACACTCAACCCAAGcacac--------gtacacatgcacac-------------------ccatgc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 329125 74 - 2409723 cacacacg--------cacacccatgcacacctgtgcacacaacccaagcacacatgcacatgcacacatgcacac-------------------ccatgc i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e otoGar3.GL873611 2197304 0 - 8137123 C e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 98799 496 - 2515279 I e cerAty1.NW_012002954v1 16937878 700 - 21915920 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 464398 551 - 2125214 I a score=36135.000000 s hg38.chr7_KI270899v1_alt 100207 28 + 190869 aca--------cacactcaACCCAAGCATGCATGCA s gorGor5.CYUI01015914v1 61021 28 - 432965 aca--------cacacccaatccaagcatgcatgca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116534 28 + 85365473 aca--------cacacccaATCCAAGCATGCATGCA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33583798 28 + 192294377 ACA--------CATGCTCAACCCAAGCACGTGCACA i macFas5.chr3 C 0 C 0 s calJac3.chr2 146629199 28 - 204313951 aca--------catgctcaaccgaagcacacatgca i calJac3.chr2 C 0 I 342 s saiBol1.JH378296 329199 36 - 2409723 acacacctgtgcacacacaacccaagcacacatgca i saiBol1.JH378296 C 0 I 10 s cebCap1.NW_016107703v1 464949 28 - 2125214 ACA--------CACACCCAATCCAAGGATGCATGCC i cebCap1.NW_016107703v1 I 551 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e otoGar3.GL873611 2197304 0 - 8137123 C e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 98799 496 - 2515279 I e cerAty1.NW_012002954v1 16937878 700 - 21915920 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=77083.000000 s hg38.chr7_KI270899v1_alt 100235 109 + 190869 TGTGTGCATCTGTGCCCA--------------CAGTCAACCCAAACACGTGTGCACCT-TACACCCATG-ACACACCCA---ACCTGagcacatgcacacatgctcaacacaagcacgtgcacacatg s gorGor5.CYUI01015914v1 61049 108 - 432965 tgtgtgcatCTGTGCC-A--------------CAGTCAACCCAAACACGTGTGCACAT-TACACCCATG-ACACACCCA---ACCTGAGCACATGCACACATGCTCAACACAAGCACGTGCACACATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116562 105 + 85365473 TGTGTGCATCTGTGCCCA--------------CAGTCAACCCAAACACGTGTGCACAT-TACACCCATG---ACACCCA---ACCCAAG--CATGTACGCACGCTCAACCCAAGCCCGTGCACCCATG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33583826 109 + 192294377 CATACACACTTGCACACA--------------CACTCAACCCAAGCACGTGCACACATGCACACACACGCACATACCCA---ATCCATG--CATGCACACATGCGCAACCCAAACACGTGCACACATG i macFas5.chr3 C 0 I 2 s calJac3.chr2 146629569 86 - 204313951 TGTGTGCATCCAAGCCCA------------CACACTCAACCCAAACACGTG-GCACAT-TATACCCATGTACACATGCA---ACCTGAGTacatgcaca-------------------------catg i calJac3.chr2 I 342 C 0 s saiBol1.JH378296 329245 87 - 2409723 tgcacacatgcatgcccatgcacacacacGTGCACTCAACCCAATcacatg------------cacatgcactcatgcacacacgcatgcccatgcaca----------------------------- i saiBol1.JH378296 I 10 C 0 s cebCap1.NW_016107703v1 464977 110 - 2125214 TGTGTGCATCCATGCCCA------------CACACTCAACCCAAACACGTG-GCACAT-TATACCCATGTACACATGTA---ACCTGAGcacatgcacacatgctcaacac-agcatgtgcacacatg i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e otoGar3.GL873611 2197304 0 - 8137123 C e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 98799 496 - 2515279 I e cerAty1.NW_012002954v1 16937878 700 - 21915920 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=113305.000000 s hg38.chr7_KI270899v1_alt 100344 184 + 190869 catacccatgcacacacaatgcaa--------gcacatgcacT--------TCTGTGCACACACA----TGATGCAAACACATATGCATTGCATGCCCATGCCCATGCAGTCAACCCAAACACGTGTGCACAT----------GCACATACTCAACCTGAGCACATGCACCCATGTACACATGTGcacacacac--tcaacccaagcacacatgca s gorGor5.CYUI01015914v1 61157 184 - 432965 CATACCCATGCACACACAATGCAA--------GCACATGCACT--------TCTGTGCACACACA----TGATGCAAACACATATGCATTGCATGCCCATGCCCGTGCAGTCAACCCAAACACGTGTGCACAT----------GCACATACTCAACCTGAacacatgcacccatgcacacatgtgcacacacac--tcaacccaagcacacgtgca i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33583937 183 + 192294377 CACATGCACACACACTCAATCCGA--------GCACGTGCAC------------ATGCACACACA----CG-------CACATACCCAATCCATGCATGCACACATGC--TCAACCCAAGCACGTGCACACATACACACTTGCACACACACTCAACCCAAGCACGTGCACACATGCACACACACGCACATACCCAATCCATGCATGCACACATGCA i macFas5.chr3 I 2 C 0 s calJac3.chr2 146629655 180 - 204313951 catacccatgcacacacaatccaa--------gcacatgcacacatgcatatctgtgcacacaca------------atgcacacaca-tgaatgtggatgcccacgcattcaacccaaacatgtgttcacag----------gcatacat--agcccaaacacatgtactcatgtacacat-tgcacacatac--tcaACCCAAGCACAAGTGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 329332 194 - 2409723 cacacctgtgcacacacagcccaagcacacatgcacacgcactcatgcacacctgtgcacacacaacccaagcacacatgcacattcg-cacacatgcacacCTGTGCACTCAACCCAAGCACACATGCACAT----------GCACTAAT---Gcacatgcaaacacatacatacacacctgtgcgca--------caacccaagcacacatgca i saiBol1.JH378296 C 0 I 773 s cebCap1.NW_016107703v1 465087 180 - 2125214 catacccatgcacacacaatccaa--------gcacacgcacacatgcatatctgtgcacacaca------------atgcacacaca-TGAATGTGGATGCCCACACATTCAACCCAAACATGTATTTACAT----------GCACACAT--AGCCCAAACACATGCACTCATGTATGCAG-TGCACACATAC--TCAACCCAAGCACATGTGTG i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e otoGar3.GL873611 2197304 0 - 8137123 C e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 98799 496 - 2515279 I e cerAty1.NW_012002954v1 16937878 700 - 21915920 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e nomLeu3.chr20 116667 0 + 85365473 C a score=136459.000000 s hg38.chr7_KI270899v1_alt 100528 185 + 190869 ca----------tgatacccatgcacacacacT--ATGCAAGCACTTC-------------TGCACATA-------TGTGCATGTACACATGCACTCCATCCAAGCACATGTGCACATAGACACC--CATGCATGCTCAACTAGAGCACATAAGCAGATACATACATGTGCACACA--CACACA-ACCCAGGTATGCATGCACATGCACGTCCATCTGCACA s gorGor5.CYUI01015914v1 61341 183 - 432965 ca----------tgatacccatgcacacacacT--ATGCAAGCACTTC-------------TGCACATA-------TGTGCATGTACACATGCACTCCATCCAAGCACATGTGCACA--GACACC--CACGCATGCTCAACTCGAGCACATAAGCAGATACATACGTGCACACACA--CCCTCA-ACCCAGGTATGCATGCACATGCACGTCCATCTGCACA i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33584120 198 + 192294377 CAACCCAAACACGTGCACACATGCACACACACTCAATCCAAGCACTGCACATGCACACACATGCACATACCCAATCCATGCATGCACACATG--CTCAACCCAAGCACGTGCACACATGCACACTTGCACACACATTCAACTCAAGCACA-------GTGCACACATGCACACACA--CGCACATACCCA---ATCCATGCATGCACACATG---------- i macFas5.chr3 C 0 C 0 s calJac3.chr2 146629835 181 - 204313951 ------------TGACACCCATGCACACACACA--GTGCAAGCCCATG-------------TGCACATA-------TGTGCATGTACACAAGCACTCGACCTGAGCACATGTGCACACGGACGCC--AACGCACACTCAATCCAAGCACATAAGCAGATG----CATCTGCAAACAAACATGCA-ACCCAAGCATGCATGCACATGCACGCCCATCTGCACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 330299 175 - 2409723 CA----------TGACACCCATGCAAGCACACA--GTCCAAGCCCATG-------------TACACATA-------TGTGCATGTACACAAGCCCTCGACCTGAGCACACGTGCACATGGACACC--CATGCACACTCAATCCGAGCACATAAGCAGA------CACGTGCACACA------CA-ACCCAAGCATGTGTGCACATGCATGCCCATCAGCACA i saiBol1.JH378296 I 773 C 0 s cebCap1.NW_016107703v1 465267 181 - 2125214 CA----------TGACACCCATGCAAACACACA--GTGCAAGACCATG-------------TGCACATA-------TGTGCATGTACACAAGCACTCAACCTGAGCACATGTGCACATGGACACC--CATGCACACTCAATCCGAGCACATAAGCAGATA----CATGTGCACACA--CACGCA-ACCCAAGCATGCATGCACATGCATGCCCATCTGCACA i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e otoGar3.GL873611 2197304 0 - 8137123 C e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 98799 496 - 2515279 I e cerAty1.NW_012002954v1 16937878 700 - 21915920 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e nomLeu3.chr20 116667 0 + 85365473 C a score=46538.000000 s hg38.chr7_KI270899v1_alt 100713 25 + 190869 CTCAACCCAAGCATGTGcacacaca s gorGor5.CYUI01015914v1 61524 25 - 432965 CTCAACCCAAGCATGTGCACACACG i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33584318 25 + 192294377 CTCAACCCAAACACGTGCACACATG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16938578 25 - 21915920 CTCAACCCAAACACGTGCACACATG i cerAty1.NW_012002954v1 I 700 C 0 s manLeu1.NW_012101810v1 99295 25 - 2515279 CTCAACCCAAACACGTGCACACATG i manLeu1.NW_012101810v1 I 496 C 0 s calJac3.chr2 146630016 25 - 204313951 TTCAATCCAAGcacatgcatacata i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 330474 25 - 2409723 TTCAATCCAAGcacatgcatacata i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 465448 24 - 2125214 TTCAATTCAAGCACATGTATA-ATa i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e otoGar3.GL873611 2197304 0 - 8137123 C e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e nomLeu3.chr20 116667 0 + 85365473 C a score=11416.000000 s hg38.chr7_KI270899v1_alt 100738 10 + 190869 cacacttgta s gorGor5.CYUI01015914v1 61549 10 - 432965 CACACTTGTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116667 10 + 85365473 CACACTTGTA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33584343 8 + 192294377 CACACTTG-- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16938603 8 - 21915920 CACACTTG-- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 99320 8 - 2515279 CACACTTG-- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146630041 10 - 204313951 cagactcaca i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 330499 10 - 2409723 cagactcatg i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 465472 10 - 2125214 cagactcacg i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 255355 110 + 6586416 I e otoGar3.GL873611 2197304 0 - 8137123 C e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=67600.000000 s hg38.chr7_KI270899v1_alt 100748 37 + 190869 -------------------------------------------------------------ca----------cacacactcaacccaagcacaTGTGCAGTTGCACG s gorGor5.CYUI01015914v1 61559 37 - 432965 -------------------------------------------------------------CA----------CACACACTCAACCCAAGCACATGTGCAGTTGCACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116677 20 + 85365473 -------------------------------------------------------------CA----------CACACACTGAACCCAAGC----------------- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33584351 37 + 192294377 -------------------------------------------------------------CA----------CACACACTCAATCCAAGCACACATGTAGTTGCACG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16938611 37 - 21915920 -------------------------------------------------------------CA----------CACACACTCAATCCAAGCACACATGCAGTTGCACG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 99328 37 - 2515279 -------------------------------------------------------------CA----------CACACACTCAATCCAAGCACACATGCAGTTGCACG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 255465 37 + 6586416 -------------------------------------------------------------ca----------caCACACTCAATCCAAGCACACGTGCAGTTGCACG i colAng1.NW_012117710v1 I 110 C 0 s calJac3.chr2 146630051 101 - 204313951 tgcagacccaacccaagcatgcacacatgctcaatccaagta-------tgtgtacacatgcaccctcgtgcacacacactcaacccaaccacacatacacttgcacg i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 330509 74 - 2409723 cacacaccc--------------------------------aacccaagcatgcacacatgcacactcatg--cacacactcaaccctaccacacgtgcacttgcaca i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 465482 66 - 2125214 cacacaccc--------------------------------aacccaagcatgcacacatgca----------cacatgctcaacccaaccacaggtgcacttgcaca i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2197304 0 - 8137123 C e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=43707.000000 s hg38.chr7_KI270899v1_alt 100785 14 + 190869 AATGTGCATACAC--A s gorGor5.CYUI01015914v1 61596 16 - 432965 AATGTGCACACACTCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116697 12 + 85365473 -ATGGGCACACAG--- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33584388 14 + 192294377 AATGTGCACACAC--A i macFas5.chr3 C 0 I 21 s cerAty1.NW_012002954v1 16938648 14 - 21915920 AATGTGCACACAC--A i cerAty1.NW_012002954v1 C 0 I 55 s manLeu1.NW_012101810v1 99365 14 - 2515279 AATGTGCACACAC--A i manLeu1.NW_012101810v1 C 0 I 55 s colAng1.NW_012117710v1 255502 14 + 6586416 AATGTGCACACAC--A i colAng1.NW_012117710v1 C 0 I 4 s calJac3.chr2 146630152 14 - 204313951 aatgtgcacacac--a i calJac3.chr2 C 0 I 2 s saiBol1.JH378296 330583 12 - 2409723 aacgtg--cacac--a i saiBol1.JH378296 C 0 I 2 s cebCap1.NW_016107703v1 465548 14 - 2125214 aacgtgcacacac--a i cebCap1.NW_016107703v1 C 0 I 4 s otoGar3.GL873611 2197304 14 - 8137123 GATGTGCACAAAT--A i otoGar3.GL873611 C 0 I 1 e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=11363.000000 s hg38.chr7_KI270899v1_alt 100799 7 + 190869 ACCCAAG s gorGor5.CYUI01015914v1 61612 7 - 432965 ACCCAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116709 1 + 85365473 ------G i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33584423 7 + 192294377 ACCCAAA i macFas5.chr3 I 21 I 26 s colAng1.NW_012117710v1 255520 7 + 6586416 ACCCAAG i colAng1.NW_012117710v1 I 4 C 0 s calJac3.chr2 146630168 7 - 204313951 gcccaag i calJac3.chr2 I 2 C 0 s saiBol1.JH378296 330597 7 - 2409723 gcccaag i saiBol1.JH378296 I 2 C 0 s cebCap1.NW_016107703v1 465566 7 - 2125214 GCCCAAG i cebCap1.NW_016107703v1 I 4 C 0 s otoGar3.GL873611 2197319 7 - 8137123 ATGCATG i otoGar3.GL873611 I 1 C 0 e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 99379 55 - 2515279 I e cerAty1.NW_012002954v1 16938662 55 - 21915920 I e macNem1.NW_012019910v1 4344919 10 - 9440265 I e rheMac8.chr3 33967269 10 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=4190.000000 s hg38.chr7_KI270899v1_alt 100806 1 + 190869 C s gorGor5.CYUI01015914v1 61619 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116710 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33967279 1 + 185818997 C i rheMac8.chr3 I 10 C 0 s macFas5.chr3 33584456 1 + 192294377 T i macFas5.chr3 I 26 C 0 s macNem1.NW_012019910v1 4344929 1 - 9440265 C i macNem1.NW_012019910v1 I 10 C 0 s colAng1.NW_012117710v1 255527 1 + 6586416 C i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146630175 1 - 204313951 c i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 330604 1 - 2409723 c i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 465573 1 - 2125214 C i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2197326 1 - 8137123 C i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 99379 55 - 2515279 I e cerAty1.NW_012002954v1 16938662 55 - 21915920 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=273.000000 s hg38.chr7_KI270899v1_alt 100807 1 + 190869 A s gorGor5.CYUI01015914v1 61620 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116711 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 255528 0 + 6586416 C e otoGar3.GL873611 2197327 0 - 8137123 C e canFam3.chr6 61003979 0 - 77573801 C e chlSab2.chr28 74276 462 - 21531802 I e manLeu1.NW_012101810v1 99379 55 - 2515279 I e cerAty1.NW_012002954v1 16938662 55 - 21915920 I e macNem1.NW_012019910v1 4344930 0 - 9440265 C e macFas5.chr3 33584457 0 + 192294377 C e rheMac8.chr3 33967280 0 + 185818997 C e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 330605 0 - 2409723 C e cebCap1.NW_016107703v1 465574 0 - 2125214 C e calJac3.chr2 146630176 0 - 204313951 C a score=25607.000000 s hg38.chr7_KI270899v1_alt 100808 9 + 190869 C--------------------------ACACTCAA s gorGor5.CYUI01015914v1 61621 35 - 432965 CGTGCACACAGGCACACCCATGCATGCATACTCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116712 21 + 85365473 C--------------ACCCACGCATACATACTCAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33967280 10 + 185818997 -------------------------ACACACTCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33584457 10 + 192294377 -------------------------ACATACTCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4344930 10 - 9440265 -------------------------ACACACTCAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16938717 10 - 21915920 -------------------------ACATACTCAT i cerAty1.NW_012002954v1 I 55 C 0 s manLeu1.NW_012101810v1 99434 10 - 2515279 -------------------------ACATACTCAT i manLeu1.NW_012101810v1 I 55 C 0 s colAng1.NW_012117710v1 255528 10 + 6586416 -------------------------ACACACTCAA i colAng1.NW_012117710v1 C 0 I 43 s calJac3.chr2 146630176 10 - 204313951 -------------------------acacactcaa i calJac3.chr2 C 0 I 43 s saiBol1.JH378296 330605 10 - 2409723 -------------------------acacactcaa i saiBol1.JH378296 C 0 I 41 s cebCap1.NW_016107703v1 465574 10 - 2125214 -------------------------ACCTACTCAA i cebCap1.NW_016107703v1 C 0 I 42 s otoGar3.GL873611 2197327 12 - 8137123 -----------------------GCACACGCTTTA i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61003979 9 - 77573801 --------------------------CACACTTAA i canFam3.chr6 C 0 C 0 e chlSab2.chr28 74276 462 - 21531802 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=83266.000000 s hg38.chr7_KI270899v1_alt 100817 11 + 190869 CCCAAGCACAG-- s gorGor5.CYUI01015914v1 61656 11 - 432965 CCCAAGCACAG-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116733 11 + 85365473 CCCAAGCACAG-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33967290 11 + 185818997 CCCAAGCACAG-- i rheMac8.chr3 C 0 I 831 s macFas5.chr3 33584467 11 + 192294377 CCCAAGCATTG-- i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4344940 11 - 9440265 CCCAAGCACAG-- i macNem1.NW_012019910v1 C 0 I 882 s cerAty1.NW_012002954v1 16938727 11 - 21915920 CCCAAGCATAG-- i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 74738 11 - 21531802 CCCAAGCATAG-- i chlSab2.chr28 I 462 I 1 s manLeu1.NW_012101810v1 99444 11 - 2515279 CCCAAGCATAG-- i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 255581 11 + 6586416 CCCAAGCATAG-- i colAng1.NW_012117710v1 I 43 I 1 s calJac3.chr2 146630229 11 - 204313951 CCCAAGCATAG-- i calJac3.chr2 I 43 I 1 s saiBol1.JH378296 330656 11 - 2409723 CCCAAGCATAG-- i saiBol1.JH378296 I 41 I 1 s cebCap1.NW_016107703v1 465626 11 - 2125214 CCCAAGCATAG-- i cebCap1.NW_016107703v1 I 42 I 1 s otoGar3.GL873611 2197340 11 - 8137123 CCCAAGCACAG-- i otoGar3.GL873611 I 1 I 1 s canFam3.chr6 61003988 11 - 77573801 --CATACATACAC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=-10878.000000 s hg38.chr7_KI270899v1_alt 100828 2 + 190869 -CT s gorGor5.CYUI01015914v1 61667 2 - 432965 -CT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116744 2 + 85365473 -CT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33584479 1 + 192294377 -C- i macFas5.chr3 I 1 C 0 s cerAty1.NW_012002954v1 16938739 1 - 21915920 -C- i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 74750 1 - 21531802 -T- i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 99456 1 - 2515279 -C- i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 255593 1 + 6586416 -T- i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chr2 146630241 1 - 204313951 -T- i calJac3.chr2 I 1 C 0 s saiBol1.JH378296 330668 1 - 2409723 -T- i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 465638 1 - 2125214 -T- i cebCap1.NW_016107703v1 I 1 C 0 s otoGar3.GL873611 2197352 1 - 8137123 -T- i otoGar3.GL873611 I 1 I 1 s canFam3.chr6 61003999 2 - 77573801 TT- i canFam3.chr6 C 0 C 0 e macNem1.NW_012019910v1 4344951 882 - 9440265 I e rheMac8.chr3 33967301 831 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=3421512.000000 s hg38.chr7_KI270899v1_alt 100830 439 + 190869 ----CACCAGGGACAGAG-GCCCAGGAACAGACTCTGACAAAACAATGAAGAGAATCCAAAAAGCAATTACACTGCCAAGTATTACGCAAACACAATTATTGGAATTGCTAGTCAAAAACGGTTAATAGAATAATTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCTGACATGTGCATATACTATCTAAATAAT-ACTCTTTCCTCTGA--TTTAGTCTCTCATTAAAATCAGATTTCATTGGGAGAAATTATACA-TTTGCACCATCATTG---GGAAGAAGAAGCCATGTTCACTCAC----CCACTGATGAAAATAGGAGATTATTAGAGGAAGTAAAATGGGAATATATTTTCCTGGCCTTCCCTGGCACAGTGTGATCTGTCCCTGTAATAAACCACCGCTTCCTCCTAGCCTGCCACTCGGGAGGTGAGGGAAGCCAGTTAA s gorGor5.CYUI01015914v1 61669 444 - 432965 ----CACCAGGGACAGAG-GCCCAGGAACAGACTCTGACAAAACAATGAAGAGAATCCAAAAAGCAATTACACTGCCAAGTATTACGCAAACACAATTATTGGAATTGCTAGTCAAAAACGGTTAATAGAATAATTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCTGACATGTGCATATACTATCTAAATAATTACTCTTTCCTCTGA--TTTAGTCTCTCATTAAAATCAGATTTCATTGGGAGAAATTATACA-TTTGCACCATCATTG---GGAAGAACAAGCCATGTTCACTCACTCACCCACTGATGAAAATAGGAGATTATTAGAGGAAGTAAAATGGGAATATATTTTCCTGGCATTCCCTGGCACAGTGTGATCTGTCCCTGTAATAAACCACCGCTTCCTCCTAGCCTGCCACTCGGGAGGTGAGGGAAGCCAGTTAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 116746 438 + 85365473 ----CACCAGGGAGAGAG-GCCCAGAAACGGGCTCTGACAAAACAATGAAGAGAATCCAAAAAGCAATTACACTGCCAAGTATTACACGAATACAATTATTGGAATTGCTAGTCAAAAACGGTTAATAGAATAATTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCTGACATGTGC--ATACTATCTAAATAATTACTCTTTCCTCTGA--TTTAGTCTCTCATTAAAATCAGATTTCATTGGGAGAAATTGTACA-TTTGCACCATCATTG---GGAAGAACAAGCCATGTTCATTCAC----CCACTGATGAAAATGAGAGATTATTAGAGGAGGTAAAATGGGAATATATTTTCCTGGCATTCCCTGGTGCAGTGTGATCTGTCCCTGTAATAAGCCACCGCTTCCTCCTAGCCTGCCACTCGGGAGGGGAGGGAAGCCAGATAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33968132 438 + 185818997 ----CACCAGGGAGAGAG-GCCCAGGAACAGACTCTGACAAAACAATGAACAAAATCCAAAAAGCAATTACACTGCCAAGTATTATGCTAACACAATTGTTGGAATTGCTAGTCAAAAACAGTTAATAGAATAATTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCGGACATGTGC--ATACTATCTAAATAATTACCCTTTCCTCTGA--TTTAGTCTCTCATTAAAACCAGATTTCATTGGGAGAAATTATACA-TTTGCACCATCATTG---GGAAGAACAAGCCATGTTCATTCAC----CCACCGATGAAAATGGGAGATTATTAGAGGAGGCAAAATGGGAATATATTTTCCTGGCATTCCCTGGTGCAGTGTGATCTGTCCCTGTAATAAAGCACTGCTTCCTCCTAGCCTGCCACTCAGGAGGTGAGGGAAACCAGTTCA i rheMac8.chr3 I 831 C 0 s macFas5.chr3 33584480 438 + 192294377 ----CACCAGGGAGAGAG-GCCCAGGAACAGACTCTGACAAAACAATGAACAAAATCCAAAAAGCAATTACACTGCCAAGTATTATGCTAACACAATTATTGGAATTGCTAGTCAAAAACAGTTAATAGAATAATTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCGGACATGTGC--ATACTATCTAAATAATTACCCTTTCCTCTGA--TTTAGTCTCTCACTAAAACCAGATTTCATTGGGAGAAATTATACA-TTTGCACCATCATTG---GGAAGAACAAGCCATGTTCATTCAC----CCACCGATGAAAATGGGAGATTATTAGAGGAGGCAAAATGGGAATATATTTTCCTGGCATTCCCTGGTGCAGTGTGATCTGTCCCTGTAATAAAGCACTGCTTCCTCCTAGCCTGCCACTCAGGAGGTGAGGGAAACCAGTTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4345833 438 - 9440265 ----CACCAGGGAGAGAG-GCCCAGGAACAGACTCTGACAAAACAATGAACAAAATCCAAAAAGCAATTACACTGCCAAGTATTATGCTAACACAATTATTGGAATTGCTAGTCAAAAACAGTTAATAGAATAATTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCGGACATGTGC--ATACTATCTAAATAATTACTCTTTCCTCTGA--TTTAGTCTCTCATTAAAACCAGATTTCATTGGGAGAAATTATACA-TTTGCACCATCATTG---GGAAGAACAAGCCATGTTCATTCAC----CCACCGATGAAAATGGGAGATTATTAGAGGAGGCAAAATGGGAATATATTTTCCTGGCATTCCCTGGTGCAGTGTGATCTGTCCCTGTAATAAAGCACTGCTTCCTCCTAGCCTGCCACTCAGGAGGTGAGGGAAACCAGTTCA i macNem1.NW_012019910v1 I 882 C 0 s cerAty1.NW_012002954v1 16938740 438 - 21915920 ----CACCAGGGAGAGAG-GCCCAGGAACAGACTCTGACAAAACAATGAACAAAATCCAAAAAGCAATTACACTGCCAAGTATTATGCTAACACAATTATTGGAATTGCTAGTCAAAAACAGTTAATAGAATAATTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCGGACATGTGC--ATACTATCTAAATAATTACCCTTTCCTCTGA--TTTAGTCTCTCATTAAAACCAGATTTCATTGGGAGAAATTATACA-TTTGCACCATCATTG---GGAAGAACAAGCCATGTTCATTCAC----CCACCGATGAAAATGGGAGATTATTAGAGGAGGCAAAATGGGAATATATTTTCCTGGCATTCCCTGGTGCAGGGTGATCTGTCCCTGTAATAAAGCACTGCTTCCTCCTAGCCTGCCACTCAGGAGGCGAGGGAAACCAGTTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 74751 438 - 21531802 ----CACCAGGGAGAGAG-GCCCAGGAACGGACTCTGACAAAACAATGAACAAAATCCAAAAAGCAATTACACTGTCAAGTATTATGCTAATACAATTATTGGAATTGCTAGTCAAGAACAGTTAATAGAATAATTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCGGACATGTGC--ATACTATCTAAATAATTACCCTTTCCTCTGA--TTTAGTCTCTCATTAAAATCAGATTTCATTGGGAGAAATTATACA-TTTGCACCACCATTG---GGAAGAACAAGCCATGTTCATTCAC----CCACCGATGAAAATGGGAGATTATTAGAGGAGGCAAAATGGGAATATATTTTCCTGACATTCCCTGCTGCAGTGTGATCTGTGCCTGTAATAAAGCACTGCTTCCCCCTAGCCTGCCACTCAGGAGACGAGGGAAACCAGTTCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 99457 438 - 2515279 ----CACCAGGGAGAGAG-GCCCAGGAACAGACTCTGACAAAACAATGAACAAAATCCAAAAAGCAATTACACTGCCAAGTATTATGCTAACACAATTATTGGAATTGCTAGTCAAAAACAGTTAATAGAATAATTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCGGACATGTGC--ATACTATCTAAATAATTACCCTTTCCTCTGA--TTTAGTCTCTCATTAAAACCAGATTTCATTGGGAGAAATTATACA-TTTGCACCATCATTG---GGAAGAACAAGCCATGTTCATTCAC----CCACCGATGAAAATGGGAGATTATTAGAGGAGGCAAAATGGGAATATATTTTCCTGGCATTCTCTGGTGCAGTGTGATCTGTCCCTGTAATAAAGCACTGCTTCCTCCTAGCCTGCCACTCAGGAGGCGAGGGAAACCAGTTCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 255594 438 + 6586416 ----CACCAGGGAGAGAA-GCCCAGGAATGGACTCTGACAAAACAATGAACAAAATCCAAAAAGCAATTACACTGCCAAGTATTATCCTAATACAATTATTGGAATTGGTAGTCAAAAACAGTTAATAGAATAACTAAGATAGATTGACCTAAAAGCTGATTTTAAATTAACCTGACATGTGC--ATGCTATCTAAATAATTACCCTTTCCTCTGA--TTTAGTCTCTCATTAAAATCAGATTTCATTGGGAGAAATTACACA-TTTGCACCATCATTG---GGAAGAACAAGCCATGTTCATTCAC----CCACCGATGAAAATGGGAGATTATTAGAGGAGGTAAAATGGGAATATATTTTCCTGGCATTCCCTGGTGCAGTGTGATCTGTCCCTGTAATAAAGCACTGCTTCCTCCTAGCCTGCCATTCAGGAGGCGAGGGAAACCAGTTAA i colAng1.NW_012117710v1 C 0 M 990 s calJac3.chr2 146630242 438 - 204313951 ----TACCAGGGAGAGAG-GTCCAGAAACAGACTCTGACATAACAATAAACAGAATCCAATAAGCAATTACACTCCCAAGTGTGATGCTAATACAATTATTGGAATTGCTAGTCAAAAGCAGTTAATAGAATAATTAAGATAGATTGACCTCAAAGCTGATTTTAAATTAACCTGACATGGGC--ATACTATCTAAAAAATTACTCTTTCCTCTGA--TTTAGTCTCTCATTAAAATCAGATTTCATTGGGAGAAATTATACA-TTTGCAACATCATTG---GGAGGAACAAGCCATGTTCATTCAC----CCACTTATGAAAATGTAAGATTATTAGAGGAGGTAAAATGGGAATACATTTTCCTGGCATTCCCAGGTGCAGTGTGATCTGTCCCTGTAGTAAACCACCACTTCCTCCTAGCCTGCCACTCAGGAGGTGATGGAAACCAGTTAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 330669 430 - 2409723 ----CACCAGGGAGAGAG-GTCCAGGAACAGACACTGATGTAACAATGAACAGAATCCAAAAAGCAATTACACTCACAAGTGTTATGCTAATACAATGATCGGAATTGCTA-TCAAAAGCAGTTAATAGAA----TAAGATAGATTGACCTCAAAGCTGATTTTAAATTAAACTGACATGTGC--ATACTATCTAAAAAATTACTCTTTCCTCTGA--TTTAGTCTCTCATTAAAATCAGATTTCATTGGGAGAAATTATACA-TTTGCACCATCCTTGGGAGGAGGAACAAGCCATGTTCATTCAG----CCACTGATGAAAAT---AGACTACTAGAGGAGGTAAAATGGGAATACATTTTCCTGGCATTCCTAGGTGCAGTGTGATCGGTCCCTGTAATAAACCACCACTTCCTCCTAGCTTGTCACTC---AGGTGAGGGAACCCAGTTAA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 465639 435 - 2125214 ----TAGCAGGGAGAGAG-GTACAGGAATGGACTCTGACATAACAATGAACAGAATCCAAAAAGCAATTACACTCCCAAGTGTTATGCTAATACAATGATTGGAATTGCTAGTCAAAAGCAGTTAATAGAATAA-TAAGATAGATTGACCTCAAAGCTGATTCTAAATTAACCTGAC--GTGC--ATACTATCTAAAAAGTTACTCTTTCCTCTGA--TTCAGTCTCTAATTAAAATCAGATTTCACTGGGAGAAAGTATACA-TTTGCACCATCCTTG---GGAGGAACAAGCCATGTTCATTCAG----CCACTGATGAAAATAGAAGATTATTAGAGGAGGTAAAATGGGAATACACTTTCCTGGCATTCCCAGGTGCAGTGTGATCTGTCCCTGTAATAAACCACCACTTCCTCCTAGCCTGTCACTCAGGAGATGATGGAACCCAGTTAA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2197354 417 - 8137123 ----GCCCCAGAAGAGAA-GCCCAAGA---GTCTCTGGCATCATAATGAACAGAATCCAA-AAGCAATTACACTGCCAGGTATTATGCTAATACAATTATTGAAATTGCAAGTCAAAAACAGTTAATGGAATAATTAAGATAGATTGACCTAAAAGCTGATGTTAAATTAACCTGACATGTGA--ATCCTATCTAAATAATTACTCTCTCCTATGATTTTTAGTCTCTCATTAGAATCAGTTTTCACTGGGAAGAGTGATACATTTTGCACCATGATTG---GGAAGAACAAGCCCTGCTGA-TCAC----CCAC----------------TTATCAGAAGGGGTCGAAGTGGAAGGAATTTTCT--GCCTTCCCAGGTGCAGTGTGGTGTGTCACCGTGATAAACCAC-ACTCTGTCCTACCCTGCCACTCAGGAAACGACTGAAATCTGTTTA i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61004001 429 - 77573801 AATACAGCACAGAGAGAGAGCCCAGGAGCTGACTCCAGCATCACAAGGAACAGAATCCAAAAAGTAATTACACTGCCAAGTGTTATGCTAATACAATTATTGAAATTACCAGTCAAAAGCAGTTAATGAAATAATTAAGACAGATAGACCTAAAACTTGATTTAAAATTAACCTGACACGTGC--ATACTATCTAAATAATGACTCTCTCCTGTGA--TCTAGCCTCTCATTAAAATCAGATTTCTTTGGGAGAAATTATACATTTTGCACCATGATTG---GGAAGAACAAATCACATTCACTGCC----CCACTAATGAATGTGGAGGA------------GCTAAACGAAAGCGAATGTGCCCAGCCTTCCCTGGTATGGCGCCATCTGCCACTGTAACCAACTACCG-TCCCTCCCA--TTTTCCCTCAGCAAATGCTAGGAGCCCATTAA i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=1854981.000000 s hg38.chr7_KI270899v1_alt 101269 394 + 190869 GATGGCCTCAACTAAGGACCCCAAACCACTAGTGTC--TGTGTGTGTCTGTGAA----GCTCGCTCACGGGGGAAG-------------------GGCCCGTGGG---------------GTGGGCAAGAGCAAGGAAGAGAAATGAGCACTTG---GAGACGCCAGGCAACCAGGAAGACCCAGAGGAAACTCGGTACGTCTGCATTGAACACG--TCTTCATGGGTGAGAAAACTGCAGCCAAGGAAGGAGAGGGATTGTTT-CCAGGCAAACAGCAAGCGCTGGCAGAG---AG--GCAG--G--------GACAGAGGCT------------GTTTTCGGCATC--------------------------------------------CAGCAT---CTCTGTTCAGCTCATGATTCCCTGCCACACCCCAGA----------------TAAAATGAACCCCTGTGGGGGTTTG---TCTGTGCACGCG----------------TCCAGGGCCTATCCTGGTCTGTGTGAACA------GACTGGCCCTG s gorGor5.CYUI01015914v1 62113 395 - 432965 GATGGCCTCAACTAAGGACCC-AAACCACTAGTGTC--TGTGTGTGTCTGTGAA----GCTCGCTCACGGGGGAAG-------------------GGCCCGTGGG---------------CTGGGCAAG-GCAAGGAAGAGAAATGAGCACTTG---GAGACACCAGGCAACCAAGAAGACCCAGAGGAAACTCGGTACGTCTGCATCGAACACG--TCTTCATGGGTGAGAAAACTGCAGCCAAGGAAGGAGAGGGATTGTTTTCCAGGCAAACAGCAAGCCCTGGCAGAG---AGAGGCAG--G--------GACAGAGGCT------------GTTTTCAGCATC--------------------------------------------CAGCAT---CTCTGTTCAGCTCATGATTTCCTGCCACACCCCAGA----------------TAAAATGAACCCCTGTGGGGGTTTG---TCTGTGCACGCG----------------TCCAGGGCCTATCCTGGTCTGTGTGAACA------GACCAGCCCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 117184 379 + 85365473 GATGGCCTCAACCAAGGACCCCAAACCACTAGTGTC--TGTGTGTGTCTGTGAA----GCTCGCTCACGGGGGAAG-------------------GGCCCGTGGG---------------GGGG------GCAAGGAAGAGAAATGAGCACTTG---GAGACAGCAGGCAACCAAGAAGACCCAGAGAAAACTCGGTACGTCTGCATCCAACAAG--CCTTCATGGGTGAGAAAACTGCAGCCAAGGAAGGAGAGGGATTGTTT-CCAGGCAAACAGCAAGCCCTGGCAGAG---AG--GCAG--G--------GACAGAGGCT------------GTTTTCAGCATC--------------------------------------------CAGCAT---CTCCGTTCAGCTCATGATTTCCTGCCACACCCCAGA----------------TAAAATGAACCCCTGTGGGGGTTTG---TCTGTGCAC-------------------------GCCTATCCCGGTCCGTGTGAACA------GACTGGCCCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33968570 398 + 185818997 GAGGGCCTCAACCAAGGACCCCAAACCACTAGTGTCTGTGTGTGTGTCTGTGAAGCTCGCTCGCTCACCGGGGAAG-------------------GGCCCGCGGG---------------GTGG------GCAAGGAAGAG-AATGAGCACTTG---GAGAGGCCAGGCAGCCAAGAAGACCCAGAGGAAACTCGGTATGTCTGCACCGAACACG--TCTTCATGGGTGAGAAAACTGCAGCCAAGGAAGGAGAGCGATTGTTT-CCAGGCAAACCGCAAGCCCTGGCAGAA---AGAGGCAG--C--------GACAGAGGCT------------GTTTTCAGCATC--------------------------------------------CAGCGTCTCCTCCTTTCGGCTCACAATTTCCTGCCACACCCCAGA----------------TAAAATGAACCCCTGTGGGGGTTTG---TCTGTGCACACG----------------GCCAGGGCCGATCCCGGTCTGTGTGAACA------GACTGGCTCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33584918 389 + 192294377 GAGGGCCTCAACCAAGGACCCCAAACCACTAGTGTCTGTGTGTGTGTCTGTGAAGCTCGCTCGCTCACCGGGGAAG-------------------GGCCCGCGGG---------------GTGG------GCAAGGAAGAG-AATGAGCACTTG---GAGAGGCCAGGCAGCCAAGAAGACCCAGAGGAAACTCGGTATGTCTGCACCGAACACG--TCTTCATGGGTGAGAAAACTGCAGCCAAGGAAGGAGAGCGATTGTTT-CCAGGCAAACCGCAAGCCC------------GAGGCAG--G--------GACAGAGGCT------------GTTTTCAGCATC--------------------------------------------CAGCGTCTCCTCCTTTCGGCTCACAATTTCCTGCCACACCCCAGA----------------TAAAATGAACCCCTGTGGGGGTTTG---TCTGTGCACACG----------------GCCAGGGCCGATCCCGGTCTGTGTGAACA------GACTGGCTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4346271 398 - 9440265 GAGGGCCTCAACCAAGGACCCCAAACCACTAGTGTCTGTGTGTGTGTCTGTGAAGCTCGCTCGCTCACCGGGGAAG-------------------GGCCCGCGGG---------------GTGG------GCAAGGAAGAG-AATGAGCACTTG---GAGAGGCCAGGCAGCCAAGAAGACCCAGAGGAAACTCGGTATGTCTGCACCGAACACG--TCTTCATGGGTGAGAAAACTGCAGCCAAGGAAGGAGAGCGATTGTTT-CCAGGCAAACCGCAAGCCCTGGCAGAA---AGAGGCAG--C--------GACAGAGGCT------------GTTTTCAGCATC--------------------------------------------CAGCGTCTCCTCCTTTCGGCTCACAATTTCCTGCCACACCCCAGA----------------TAAAATGAACCCCTGTGGGGGTTTG---TCTGTGCACACG----------------GCCAGGGCTGATCCCGGTCTGTGTGAACA------GACTGGCTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16939178 398 - 21915920 GAGGGCCTCAACCAAGGACCCCAAACCACTAGTGTCTGTGTGTGTGTCCGTGAAGCTCGCTCGCTCACCGGGGAAG-------------------GGCCCGCGGG---------------GTGG------GCAAGGAAGAG-AATGAGCACTTG---GAGAGGCCAGGCAGCCAAGAAGACCCAGAGGAAACTCGGTATGTCTGCACCGAACACG--TCTTCATGGGTGAGAAAACTGCAGCCAAGGAAGGAGAGCGATTGTTT-CCAGGCAAACCGCAAGCCCTGGCAGAG---AGAGGCAG--G--------GACAGAGGCT------------GTTTTCAGCATC--------------------------------------------CAGCGTCTCCTCCTTTCGGCTCACAATTTCTTGCCACACCCCAGA----------------TAAAATGAACCCCTGTGGGGGTTTG---TCTGTGCACACG----------------GCCAGGGCCGATCCCGGTCTGTGTGAACA------GACTGGCTCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 75189 398 - 21531802 GAGGGCCTCAACCAAGGACCCCAAACCACTGGTGTCTGTGTGTGTGTCTGTGAAGCTCGCTCGCTCACCGGGGAAG-------------------GGCCCGCGGG---------------GTGG------GCAAGGAAGAG-AATGAGCACTTG---GAGAGGCCAGGCAGCCAAGAAGACCCAGAGGAAACTCGGTATGTCTGCACCGAACACG--TCTTCATGGGTGAGAAAACCGCAGCCAAGGAAGGAGAGCGATCGTTT-CCAGGCGAACCGCAAGCCCTGGCAGAG---AGAGGCTG--G--------GACAGAGGCT------------GTTCTCAGCATC--------------------------------------------GAGCGTCTCCTCCTTTCGGCTCACAATTTCCTGCCACACCCCAGA----------------TCAAATGAACCCCTGTGGGGGTTTG---TCTGTGCCCACG----------------GCCAGGGCCGATCCCGGTCTGTGTGAACA------GACTGGCTCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 99895 397 - 2515279 GAGGGCCTCAACCAAGGACCCCAAACCACTAgtgtgtgtgtgtgtgtctgtgAAGCTCGCTCGCTCACCCGGGAAG-------------------GGCCCGCGGG---------------GTGG------GCAAGGAAGAG-AATGAGCACTTG---GAGAGGCCAGGCAGCCAAGAAGACCCAGAGGAAACTCGGTATGTCTGCACCGAACACG--TTTTCATGGGTGAGAAAATTGCAGCCAAGGAAGGAGAGCGAT-GTTT-CCAGGCAAACCGCAAGCCCTGGCAGAG---AGAGGCAG--G--------GACAGAGGCT------------GTTTTCAGCATC--------------------------------------------CAGCGTCTCCTCCTTTCGGCTCACAATTTCTTGCCACACCCCAGA----------------TAAAATGAACCCCTGTGGGGGTTTG---TCTGTGCACACG----------------GCCAGGGCCGATCCCGGTCTGTGTGAACA------GACTGGCTCTG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146630680 390 - 204313951 AATGGCCTCAATTGAGGACCCCAAACCACTAGTGTCTGTGTGGGTATCTGTGCT----GCTCCCTCATGGGGGAAG-------------------GGTTCATGGG---------------GTGA------GCAAGGAAGAGAAATGAGCACTTG---GAGACACCAGGCAACCCAGAAGACCTAGAGGAAACTCAGTGAGTCTGCATCGAACACA--TCttcatcggtgagaaaactgaagccaaggaaggagagggattgttt-tgaggcaaacagcaaaacttctcagat---agtggcagaag--------gacggaggct------------gtt-tcagcacc--------------------------------------------caccgtcttctc-tttcagctcaagatttctTGCCACACCCCAGA----------------TAAAATAAATCCCTGTGGAGGTTTG---TCTGTGCACACA-----------------C----GACTATCCCAGTCAGTGTGGACA------GATTGGCCCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 331099 388 - 2409723 AATGGCATCAGCTGAGGACCCCAAACCACTAGCGTCTGTGTGGGCATCTGTGCT----GCTCCCTCCTGGGGTAAG-------------------GGCTCATGGG---------------GTGA------CCAAGGAAGAGAAATGAGCACTTG---GAGACACCAGGCAACCCAG-AGACCTAGAGGAAACTCGGTGAGTCTGCATCGGACACA--TGTTCACGGGTGAAAAAAAC-AAGCCAAGGAAGGAGAGGGATTGTTT-TGAGGCAAACAGCAAAACTTCTTGGGT---AGTGGCAGAAG--------GACAGAGGCT------------GTT-TCAGCATC--------------------------------------------CACCACCTTCTC-TTTCAGCTCAAGATTTCTTGCCACACCCCAGA----------------TAAAACAAGTCCCTGTGGAAGTT-------TGTGCACACG-----------------CCAGGGCCTACCCCAGTCAGTGTAGACA------GACTGGCCCTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 466074 437 - 2125214 AATGGCCTCAACTGAGGACCCCAAACCACTAGGGTCTGTGTGGGTATCTGTGCT----GCTCCCTCACGGGGTAAG-------------------GGTTCATAGG---------------GTGA------GCAAGGAAGAGAAACGAGCACTTG---GAGACACCAGGCAACCCAGAAGACCTAGAGGAAACTCAGTGAGTCTGCATCAGACACA--TCTTCATGGGTGA-AAAACTGAAGCCAAGGAAGGAGAGGGATTGTTT-TGAGGCAAACAGCAAAACTTCTCAGGT---AGTGGCAGAAG--------GACAGAGGCT------------GTt-tcagcatccaccatcttctctttcagcatccaccatcttctctttcagcattcaccatCTTCTC-TTTCAGCTCAAGATTTCTTGCCACACCCCAGA----------------TAGAACAAATCCCTGTGGAGGTTTC---TCTGTGCACACT-----------------CCAGGGCCTATCCCAGTCGGTGTGGACA------GACTGGACCTG i cebCap1.NW_016107703v1 C 0 I 5 s otoGar3.GL873611 2197771 348 - 8137123 AAATTTGTCAGCCAAGGACCCCAA---ACTGACGCTTGTGTGGGTGTCTGTGAC----GTTCCCCC--CAGGGAAG-----------------------CCAGGG---------------CCAG------TCAGGGAGGAG--GCGTGAACCTGGCTGAGACACTACACGGT---GAAGACCC----------------------------------------------------CTGAGACCCAGGAAGG-GAGGGGCTGCTT-TGAAGTGAACACCAAGCCTGGGCACAGGCCAGTGTTAA--GTGTTTTCTGCGGAAGCCT------------CTTCCCAGC--T--------------------------------------------CAGCACCTCCTCCTTTCAGGACATGGTTTCCTG-----CCCTAGA----------------TGAAATGACCACCTGGGAGGATT-----CCTGTCCACATGCGTGTGGTTGGATTATACCAAGG-TTGTCCTAGCT--TGTGGGCA------GACTGTCCCTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61004430 438 - 77573801 AATTGTATCAGTGAAGGACCCTAAGATACTGG---------GTGTGCACCTGAA----GCTCTTCCTAAAGGGAAGTTGGGCAGAGGTGACCTGTGGCACTGGGGTCTTACAGATGTTCTGTGG------AAGAGGAAGAAAAATGTGTACCTC---TCTCACGTAGGCAGTT-------CCTACA------TTGATGTGCATGCATCCAGCTCATTTCTCTAGAGGTGAGGAAACC-CAGCCAAGAAGAGAATGGGCTTGTTG-GAAACTTATTCCCAAGCTT--GTGGCT---AG-GGCAG--G--------AGCAGCAGCTCTGTGGGTTATGCTTTCCTGC--T--------------------------------------------CAGTACCTCCT--TTTACCCTCGTGATTTCCCACCAGAACTCATAGTGAGGTGTGTTGGTCTACAGTGTACCGCTGGCATACCCCAGCTCCTGGGGCCTTG----------------CCCCAGGTTTGGCCCAGTCTAGGTGAACAGTTTTTGCTTGTCCCTG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 256032 990 + 6586416 M e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=10318.000000 s hg38.chr7_KI270899v1_alt 101663 10 + 190869 --CATCCCAGCA s gorGor5.CYUI01015914v1 62508 10 - 432965 --CATCCCAGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 117563 10 + 85365473 --CATCCCCGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33968968 10 + 185818997 --CCTCCCCGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33585307 10 + 192294377 --CCTCCCCGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4346669 10 - 9440265 --CCTCCCCGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16939576 10 - 21915920 --CCTCCCCACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 75587 10 - 21531802 --CCTCCCTGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 100292 10 - 2515279 --CCTCCCCGCA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146631070 5 - 204313951 ----TCCAT--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 331487 5 - 2409723 ----TCCGG--- i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2198119 10 - 8137123 --TGTCCCTGCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61004868 10 - 77573801 TATCTCCAGG-- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 256032 990 + 6586416 M e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 466511 5 - 2125214 I a score=670734.000000 s hg38.chr7_KI270899v1_alt 101673 163 + 190869 CAGA-----------------------AGCCTG-----GGCTGAGCACCAAAGGCCCCC------AACTGCGGGAGGCAGGTCCTGGTCACTGCTCCCTCCAC-GGCCATG-GCTCCAGTGTGCAGATCTCAGCTAGTGTCTAAAACACGAAGGCACTGGGTCACTACAGCTATGGGCCTCC------------TTGTTCAT-TGAAACCCT s gorGor5.CYUI01015914v1 62518 160 - 432965 CAGA-----------------------AGCCTG-----GGCTGAGCACCAAAGGCCCC--------ACTGCGGGAGGCAGGTCCTCGTCACTGCTCCCTCCAC-GGCCATG-G-TCCAGTGTGCAGATCTCAGCTAGTGTCTAAAACACGAGGGCACTGGGTCACTACAGCTATGGGCCTCC------------TTGTTCAC-TGAAACCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 117573 162 + 85365473 CAGA-----------------------AGCCTG-----GGCTGAGCACCAAAGGCCCCC-------ACTGTGGGAGGCAGGTCCTGGCCACTGCTCCCTCCAC-GGCCATG-GCTCCAGGGTGCAGACCTCAGCTGGTGTCTAAAACACGAGGGCACTGGGTCACTACAGCTATGGGCCTCC------------TTGTTCAT-TGAAACCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33968978 161 + 185818997 CAGA-----------------------AGCCTG-----GGCTGAGCACCAGAGGCCCCG-------ACTGTGGGAGGCAGGTCCTGGCCACTGCTCCCTCCAC-GGCCACG-GCTCCAGCATGCAGATCTCAGCTGGTGTCTGAAACACGCGGGCACTAGGTCAGCACAGCTAAGGGCCTCC-------------TGTTCAT-CCAAACCCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33585317 161 + 192294377 CAGA-----------------------AGCCTG-----GGCTGAGCACCAGAGGCCCCG-------ACTGTGGGAGGCAGGTCCTGGCCACTGCTCCCTCCAC-GGCCATG-GCTCCAGCATGCAGATCTCAGCTGGTGTCTGAAACACGCGGGCACTAGGTCAGCACAGCTAAGGGCCTCC-------------TGTTCAT-CCAAACCCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4346679 161 - 9440265 CAGA-----------------------AGCCTG-----GGCTGAGCACCAGAGGCCCCG-------ACTGTGGGAGGCAGGTCCTGGCCACTGCTCCCTCCAC-GGCCATG-GCTCCAGCATGCAGATCTCAGCTGGTGTCTGAAACACGCGGGCACTAGGTCAGCACAGCTAAGGGCCTCC-------------TGTTCAT-CCAAACCCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16939586 161 - 21915920 CAGA-----------------------AGCCTG-----GGCTGAGCACCAGAGGCCCCG-------ACTGTGGGAGGCAGGTCCTGGCCACTGCTCCCTCCAC-GGCCATG-GCTCCAGCATGCAGATCTCAGCTGGTGTCTGAAACACGCGGGCACTAGGTCACCACAGCTAAGGGCCTCC-------------TGTTCAT-CCAAACCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 75597 161 - 21531802 CAGA-----------------------AGCCTG-----GGCTGAGCACCAGAGGCCCCC-------AATGTGGGAGGCAGGTCCTGGCCACGGCTCCCTCCAC-GGCCATG-GCTCCAGCGTGCAGATCTCAGCTGGTGTCTGAAACACGCGGGCACTAGGTCACCACAGCTGAGGGCCTCC-------------TGTTCAT-CCAAACCCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 100302 161 - 2515279 CAGA-----------------------AGCCTG-----GGCTGAGCATCAGAGGCCCCG-------ACTGTGGGAGGCAGGTCCTGGCCACTGCTCCCTCCAC-GGCCATG-GCTCCAGCATGCAGATCTCAGCTGGTGTCTGACACACGCGGGCACTAGGTCACCACAGCTAAGGGCCTCC-------------TGTTCAT-CCAAACCCG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146631075 127 - 204313951 AAGA-----------------------AGCCTG-----GG----------AATGCCCC--------ACTGCAGAAGACTGCAGTGGGCCACTGCTTCCTCCAA-GGCC-------------------------CTGGTATCTAAAACACAGAGGCACTGGGTCACCACAGCTAACAGCCTCC------------TTGTTGAT-TTACACCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 331492 127 - 2409723 CAGA-----------------------AGCCTG-----GG----------AATGCCCC--------ACTGCAGAAGGCAGGTCCTGGTCCCTGCTTCCTCCAA-GGCC-------------------------CTGATATCTAAAACACGGGGGCACTGGGTCACCACAGCTAACGGCCTCC------------TTGTTGAT-TTACACCCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 466516 127 - 2125214 CAGA-----------------------GGCCTG-----GG----------AATGCCCC--------ACTGCAGAAGGCAGGTCCTGGTCACTGCTTCCTCCAA-GGCC-------------------------CTGGTATCTAAAACACAGGGGCACTGGGTCACCACAGCTAACGGTCTCC------------TTGTTGAT-TTACACCCT i cebCap1.NW_016107703v1 I 5 C 0 s otoGar3.GL873611 2198129 192 - 8137123 AAGAACTCTGTGGTGCCATGTGTGCACAGGCTG-----GGAGGACCTCAGAACGCCCTCCCCTTCCCCTGCCAGAGGCAGGTCCTGGCCACCCCTCTCTCTGA-GGCCAGGTGCTT---------GATCACAGCTGG-ATTTGGAACAAAGGGCCA--GAGTCAGCACCGCTAAGGGCTCCCTGCttttttttttttttttt-taaaaCAC- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61004878 135 - 77573801 CAGC-----------------------TGCCTGCAATTGGCCGACCTCAG----------------ATTCTGTGTGGTGGCT----GCCGCCCCTCCCTCCAAGGGCCATG-TTCCTGGCAGGAAGACCTCAGCTAGTATCTGGGGCAT--GGGCACTTGGT------------------CC------------TCGTTCACAATAAGCCC- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 256032 990 + 6586416 M e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=113637.000000 s hg38.chr7_KI270899v1_alt 101836 15 + 190869 TGGAGTTACCTCGTT s panTro5.chr7_NW_015973501v1_random 0 15 - 19153 TGGAGTTACCTCGTT i panTro5.chr7_NW_015973501v1_random N 0 C 0 s gorGor5.CYUI01015914v1 62678 15 - 432965 TGGAGTTACCTCGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 117735 15 + 85365473 TGGAGTTACCTCGGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33969139 15 + 185818997 TGGAGTTACCTCGGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33585478 15 + 192294377 TGGAGTTACCTCGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4346840 15 - 9440265 TGGAGTTACCTCAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16939747 15 - 21915920 TGGAGTTACCTCAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 75758 15 - 21531802 TGGAGTTACCTCGGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 100463 15 - 2515279 TGGAGTTACCTCAGT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146631202 15 - 204313951 TAGAGTTACCTGGAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 331619 15 - 2409723 TAGAGTTACCTGGAT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 466643 15 - 2125214 TAGAATTACCTGGAT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198321 15 - 8137123 TCGAGTTACCTTGAT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61005013 15 - 77573801 TGGAGTTACCTTGAT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 256032 990 + 6586416 M e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=1536745.000000 s hg38.chr7_KI270899v1_alt 101851 188 + 190869 AACAC-TTTTTAAATGGATA-GCCACTTCACATTTTT-TAAGATAAAGAA-TTT--CCCCA----------------------------TTAAAATTATTGAGATTCAGTAATAACACATTATTAGGATAAGCAGG-ACATGTAAGATGCTACAAAATGATCTATTACTTGGAGGATTTTAAAACCCTAATGAGAAAAA-CGCTCACTACCATTTATTCGTTCT s panTro5.chr7_NW_015973501v1_random 15 188 - 19153 AACAC-TTTTTAAATGGATA-GCCACTTCACATTTTT-TAAGATAAAGAA-TTT--CCCCA----------------------------TTAAAATTATTGAGATTCAGTAATAACACATTATTAGGATAAGCAGG-ACATGTAAGATGCTACAAAATGATCTATTACTTGGAGGATTTTAAAACCCTAATGAGAAAAA-CGCTCACTACCATTTATTCGTTCT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 62693 188 - 432965 AACAC-TTTTTAAATGGATA-GCCACTTCACATTTTT-TAAGATAAAGAA-TTT--CCCCA----------------------------TTAAAATTATTGAGATTCAGTAATAACACATTATTAGGATAAGCAGG-ACACGTAAGATGCTACAAAATGATCTATTACTTGGAGGATTTTAAAACCCTAATGAGAAAAA-CACTCACTACCATTTATTCGTTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 117750 189 + 85365473 AACAT-TTTTTAAATGGATA-GCCACTTCACATTTTTACAAGATAAAGAA-TTT--CCCCA----------------------------TTAAAATTATTCAGATTCAGTAATAACACATTATTAAGATAAGCAGG-ACATGCAAGATGCTACAAAATGATCTATTACTTGGAGGATTTTAAAACCCTAATGAGAAAAA-CACACACTACCATTTATTCGTTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33969154 189 + 185818997 AACAT-TTTTAAAATGGATA-GCCACGTCACATTTTTATAAGATAAAGAA-TTT-CCCCCA----------------------------CTAAAATTATTCAGGTTCAATAATAACACATTATTAGGATAAGCAGG-ACATGAAAAATGCTACAAAATGGTCTGTTACTTGGAGGA-TTTAAAACCCTAATGAGAAAAA-CACTCACTACCATTTATTCATTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33585493 189 + 192294377 AACAT-TTTTAAAATGGATA-GCCACGTCACATTTTTATAAGATAAAGAA-TTT-CCCCCA----------------------------CTAAAATTATTCAGGTTCAATAATAACACATTATTAGGATAAGCAGG-ACATGAAAAATGCTACAAAATGGTCTGTTACTTGGAGGA-TTTAAAACCCTAATGAGAAAAA-CACTCACTACCATTTATTCATTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4346855 189 - 9440265 AACAT-TTTTAAAATGGATA-GCCACGTCACATTTTTATAAGATAAAGAA-TTT-CCCCCA----------------------------CTAAAATTATTCAGGTTCAATAATAACACATTATTAGGATAAGCAGG-ACATGAAAAATGCTACAAAATGGTCTGTTACTTGGAGGA-TTTAAAACCCTAATGAGAAAAA-CACTCACTACCATTTATTCATTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16939762 189 - 21915920 AACAT-TTTTTAAATGGATA-GCCACGTCACATTTTTATAAGATAAAGAA-TTT-CCCCCA----------------------------CTAAAATTATTCAGGTTCAATAATAACACATTATTAGGATAAGCAGG-ACATGAAAAATGCTACAAAATGGTCTGTTACTTGGAGGA-TTTAAAACCCTAATGAGAAAAA-CACTCACTACCATTTATTCATTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 75773 189 - 21531802 AACAT-GTTTTAAATGGATA-GCCACATCACATTTTTGTAAGATACAGAA-TTT-CCCCCA----------------------------CTAAAATTATTCAGGTTCAGTAATAACACATTATTAGGATAAGCAGG-ACATGCAAGATGCTACAAAATGGTCTGTTACTTGGAGGA-TTTAAAACCCTAATGAGAAAAA-CACTCACTACCATTTATTCGTTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 100478 189 - 2515279 AACAT-TTTTTAAATGGATA-GCCACGTCACATTTTTATAAGATAAAGAA-TTT-CCCCCA----------------------------CTAAAATTATTCAGGTTCAATAATAACACATTATTAGGATAAGCAGG-ACATGAAAAATGCTACAAAATGGTCTGTTACTTGGAGGA-TTTAAAACCCTAATGAGAAAAA-CACTCACTACCATTTATTCATTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 257028 187 + 6586416 AACAT-TTTTTAAATGGATA---CATGTCACATTTTTATAAGATAAAGAA-TTT-CCCCCA----------------------------CTAAAATTATTCAGGTTCAGTAATAACACATTATTAGGATAAGCAGG-ACGTGCAAGATGCTACAAAATGATCTGTTACTTGGAGGA-TTGAAAACCCTAACAAGAAAAA-CACTCACTACCATTTATTCGTTCT i colAng1.NW_012117710v1 M 990 C 0 s calJac3.chr2 146631217 187 - 204313951 AACAG-TTTTTAAGTGGATA-GCAACTTCACATTTTCATAAGGAAAAGAATTTT-CCCTCA----------------------------TTAAAATTATCCAGATCCAGTAATAACACATTGTTAGTAAAAGCAGG-AAATGCAAGATGCTACAGAATGACCTATTACCTGGAGGATTTTAAAATCCTAATGAGAAAAA-----CACTGCCAGTTGTTCATTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 331634 190 - 2409723 AATAT-TTTTTAAATGGATA-GCCACTTCACATTTTTATAAGGAAAAGAA-TTT-CCCTCA----------------------------TTAAAATTATCCAGATCCGTTAATACCACATTGTTAGTATAAGCAGA-AAATGCAAGATGCTACAGAATGATCTATTACCTGGAGGATTTTAAAATCCTAACGAGAAAAA-CACTCACTACCTTTTGTTCATTCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 466658 190 - 2125214 AACAT-TTTTTAAATCGATA-GCCACTTCACATTTTTATAAGGAAAAGAA-TTT-CCCTCA----------------------------TTAAAATTATCCAGATCCAGTAATAACACATTGTTAGTATAAGCAGG-AAATGCAAGATGCTACAGAATGATCTGTTACCTGGGGGATTTTAAAATCCTAACGAGAAAAA-CACTCACTACCGTTTGTTCATTCT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198336 216 - 8137123 AAAAC-TTTAGAAATGGATA-TCCATTTGGCATTTTTGTAAGATAAAGAA-TTTTTCCCCATTCTTTATTATCCCCTGAATAATTTCCCTTAGAATTATTCAGATTCGGTAAAAACATATCATTAACATGAGCAGGAAAACGCAAGAGGCTACAAAATGATCTATTACTTGGAGGGTTTTTAAATCCTAATGGGGAACA-----TTCTATCGCCTGCTCATTCT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61005028 187 - 77573801 AATATCTTTTAAAATGGGTCCTCTGCTCGGCATTTTTATGAGACAAAGTA-TTT--CCCCC----------------------------TTAAAATTATTCAAATTCAGTAAT-----ATTATTAGGAGAGTGGGA-AAACACAGGCTGCTACAAAATGGTCTATTACTGAGAGAGTTTTAACATTCTAACGAGGAAAACCCCTCTCTGTCATGTTTTCATCCT i canFam3.chr6 C 0 I 7098 e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=1816246.000000 s hg38.chr7_KI270899v1_alt 102039 262 + 190869 CTTAGCCTTCAGCACCATTAGTCTGAGGAGCAGCATAGGGCTGGGGCTGGCTGCATCCACACTCACCCCTCTGATTGCTCCAGAACCTTTTCTTCA---AAGAGAAATCTCTGCACTCTGCAGGGACGGTAAGTGGCGACCCTTAGGTAGCTG----------AAAGC-ACGGGGAAA--AGAGCAGGAAGAGGTGGGAACATGGAGATGGAGAACACAGGGAGCGGCACGCTCAACGCAGGTGGAGTCTGTGT--CCCCTCCAGCGATAGCCAGAACCA s panTro5.chr7_NW_015973501v1_random 203 262 - 19153 CTTAGCCTTCAGCACCATTAGTCTGAGGAGCAGCATAGGGCTGGGGCTGGCTGCATCCACACTCACCCCTCTGATTGCTCCAGAACCTTTTCTTCA---AAGAGAAATCTCTGCACTCTGCAGGGACGGTAAGTGGCGACCCTTAGGTAGCTG----------AAAGC-ACGGGGAAA--AGAGCAGGAAGAGGTGGGAACATGGAGATGGAGAACACAGGGAGCAGCACGCTCAACGCAGGTGGAGTCTGTGT--CCCCTCCAGCGATAGCCAGAACCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 62881 264 - 432965 CTCAGCCTTCAGCACCATTAGTCTGAGGAGCAGCATAGGGCTGGGGCTGGCTGCATCCACACTCACCCCTCTGATTGCTCCAGAACCTTTTCTTCA---AAGAGAAATCTCTGCACTCTGCAGGGACGGTAAGTGGCGACCCTTAGGTAGCTG----------AAGGC-ATGGGGAAAAGAGAGCAGGAAGAGGTGGGAACATGGAGATGGAGAACATAGGCAGCAGCACGCTCAACGCAGGTGGAGTCTGTGT--CCCCTCCAGCGATAGCCAGAACCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 117939 263 + 85365473 CTTAGCCTTCAGCACCATTAGTCTGAGGAGCAGCGTGGGACTGGGGCTGGCTGCATCCATCCTCATCCCTCTGATTGCCCCAGAACCTTTTCTTCA---AAGAGAAATCTCTGCACTCTGCAGGGATGGTAAGTGGCGACCCTTAGGTAGCTG----------AAAGCAAAGGGGAAA--AGAGCAGGAAGAGGTGGGAACACGGAGATGGAGAACACAGGCAGCAGCACGCTCAACGCAGGTGCAGTCTGTGT--CCCCTCCAGCGACAGCCGGAACCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33969343 251 + 185818997 CTTAGCCTTCAGCACCATTACTCTGAGGGGCAGCATGGGACTGGGGCTGGCTGCACCCACACGCATCCCTCCGATTGCTCCAGAACCTTTTCTTCA---AAGAGAAATCTCTGCGCTCTGCAGGGACGGTAAGCGGCGACCCTTAGGTAGCTG----------AAAGC-GCGG-------------GGACGGGGTGGGAACACAGAGATGGAGAAC--AGGCAGCAGCACGCTCCACACAGGTGGAGTCTGTGTTCCCCCTCCAGCAACAGCCAGAACca i rheMac8.chr3 C 0 I 269 s macFas5.chr3 33585682 251 + 192294377 CTTAGCCTTCAGCACCATTACTCTGAGGGGCAGCATGGGACTGGGGCTGGCTGCACCCACACGCATCCCTCCGATTGCTCCAGAACCTTTTCTTCA---AAGAGAAATCTCTGCGCTCTGCAGGGACGGTAAGCGGCGACCCTTAGGTAGCTG----------AAAGC-GCGG-------------GGACGGGGTGGGAACACAGAGATGGAGAAC--AGGCAGCAGCACGCTCCACACAGGTGGAGTCTGTGTTCCCCCTCCAGCAACAGCCAGAACca i macFas5.chr3 C 0 I 269 s macNem1.NW_012019910v1 4347044 251 - 9440265 CTTAGCCTTCAGCACCATTACTCTGAGGGGCAGCATGGGACTGGGGCTGGCTGCACCCACACGCATCCCTCCGATTGCTCCAGAACCTTTTCTTCA---AAGAGAAATCTCTGCGCTCTGCAGGGACGGTAAGCGGCGACCCTTAGGTAGCTG----------AAAGC-GCGG-------------GGACAGGGTGGGAACACAGAGATGGAGAAT--GGGCAGCAGCATGCTCCACGCAGGTGGAGTCTGTGTTCCCCCTCCAGCAACAGCCAGAACca i macNem1.NW_012019910v1 C 0 I 269 s cerAty1.NW_012002954v1 16939951 251 - 21915920 CTTAGCCTTCAGCACCATTACTCTGAGGGGCAGCATGGGACTGGGGCTGGCTGCACCCACACGCATCCCTCTGATTGCTCCAGAACCTTTTCTTCA---AAGAGAAATCTCTGCGCTCTGCAGGGACGGTAAGCGGCGACCCTTAGGTAGCTG----------AAAGC-GGGG-------------GGACGGGGTGGGAACACAGAGATGGAGAAC--GGGCAGCAGCACGTTCCATGCAGGTGGAGTCTGTGTTCCCCCTCCAGCAACAGCCAGAACca i cerAty1.NW_012002954v1 C 0 I 286 s chlSab2.chr28 75962 263 - 21531802 CTGAGCCTTCAGCACCATTGCTCTGAGGGGCAGCATGGGACTGGGG-TGGCTGCACCCACACGCATCCCTCCGATTGCTCCAGAACCTTTTCTTCA---AAGAGCAATCTCTGCGCTCTGCAGGGACGGTAAGCGGTGACCCTTACGTAGCTG----------AAAGC-GCGGGGAAAGGAGAGCAGGACGAGGTGGGAACACAGAGATGGAGAAC--AGGCAGCAGCACGCTCCACGCAGGTGGAGTCTGTGTTCCCCCTCCAGCAACAGCCAGAACca i chlSab2.chr28 C 0 I 285 s manLeu1.NW_012101810v1 100667 251 - 2515279 CTTAGCCTTCAGCACCATTACTCTGAGGGGCAGCATGGGACTGGGGCTGGCTGCACCCACAGGCATCCCTCCGATTGCTCCAGAACCTTTTCTTCA---AAGAGAAATCTCTGAGCTCTGCAGGGACGGTAAGCGGTGACCCTTAGGTAGCTG----------AAAGT-GCGG-------------GGACGGGGTGGGAACACAGAGATGGAGAAC--GGGCAGCAGCACGTTCCACGTAGGTGGAGTCTGTGTTCCCCCTCCAGCAACAGCCAGAACca i manLeu1.NW_012101810v1 C 0 I 269 s colAng1.NW_012117710v1 257215 264 + 6586416 CTTAGCCTTCAGCACCATTACTCTGAGGGGCAGCATGGGACTGGGGCTGGCTGCACCCACGCTCATCCCTCCGATTGCTCCAGAACGTTTTCTTCA---AAGAGAAATCTCTGCGCTCTGCAGGGACGGTAAGCGGCGACCCTTAGGTAGCTG----------AAAGC-GCAGGGAAAGGAGAGCAGGACGAGGTGGGAACACAGAGATGGAGAAC--AGGCAGCGGCACGCTCCACGCAGGTGGAGTCTGTGTTCCCCCTCTGGCAACAGCCAGAACca i colAng1.NW_012117710v1 C 0 I 285 s calJac3.chr2 146631404 274 - 204313951 CTGAGCCTTCAGCAACATTAGTCTGAGGAGTAGTATGGGACTGCAGCTGACTGCATCCACACTCATCCCTCTGACTGCTGTAGACCCTCTTCTTCA---AAGGGAAATCTCTGCACTCTGCAGGGACAGTAAGTGGTGACCCTTAGGTAGCTGTGAGATCCT-GAAAC-ACGAGGAAAAGAGAGAAGGAATTGGCGGGAACATGGAGATGGAGAATGCAGGCAACAGCACGCTCAGTGCAGGTGGAGTCTGTGTT-CCCCTCCAGCGACAGCCAGAACCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 331824 274 - 2409723 CTTACCCTTCAGCACCTTCAGTCTGAGGAGCAGCGTGGGACTGCAGCTGGCTGCATCCCCTCTCATCCCTCCGATTGCTCTAGGGCATTTTCATCA---AAGGGAAATCTCTGCGCTCTGCAGGGACAGCACGTGGTGACCCTTAGGCAGCTGTGAGATCCT-GATAC-ACGAGGAAAAGAGAGCAGGAATTGGTGGTAACACGGAGATGGAGAACGCAGGTAATGGCACGCTCAGCACGGGCGGAGTCTGTGTT-CCCCTCCAGCAACAGCCAGAACCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 466848 274 - 2125214 CTTAGCCTTCAGCACTGTTAGTCTGAGGAGCAGTATGGGACTGCAGCTGGCTGCATCCGCACTCATCCCTCTGATAGCTCTAGAACCCTTTCTTCA---AAGGGAAATCTCTGCGCTCTGCAGGGACAGTAAGCAGTGACCCTTAGGTAGCTGTGAGATCCT-GAAAC-ATGAGGAAAAGAGAGCAGGAATTTGTGGTAACATGGAAATGGAGAACACAGGCAACGGCACGCTCAGCACAGGCAAAGTCTGTGTT-CCCCTCCAGCGACAGCCAGAACCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198552 220 - 8137123 CTTAG----------------TCTGAGGAGAAGCCTGAAGTGGGAACTGGCCACATCTTTATTTATCCCTCTAACTTCTCCAGAACTTTTTCCCCAAAGAAGAAAAATCTCTGTGCTCCACGGAGATGGTAAGTGGTGGCCACCAGGTAACTGTGAGATTGTGAAAGC-AAGAGAAAAACAGAGGAGGAAGAGGAGAGAATGGAGATGAGGAAAACCCAGGC-----------------------------TGTT--------------AATCTGGGCCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=9513.000000 s hg38.chr7_KI270899v1_alt 102301 4 + 190869 GGAC s panTro5.chr7_NW_015973501v1_random 465 4 - 19153 GGAC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 63145 4 - 432965 GGAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 118202 4 + 85365473 GGAC i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146631678 4 - 204313951 GGAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 332098 4 - 2409723 GGAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 467122 4 - 2125214 GGAC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198772 4 - 8137123 GGCC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 257479 285 + 6586416 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 76225 285 - 21531802 I e manLeu1.NW_012101810v1 100918 269 - 2515279 I e cerAty1.NW_012002954v1 16940202 286 - 21915920 I e macNem1.NW_012019910v1 4347295 269 - 9440265 I e macFas5.chr3 33585933 269 + 192294377 I e rheMac8.chr3 33969594 269 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=505049.000000 s hg38.chr7_KI270899v1_alt 102305 75 + 190869 CACCAGGGATCCGACATCACTGGCCCCATCCCGTAGGGTGGGCTGTGGG--CAGGGAACAGCTGAATCGCCA-GGCCA s panTro5.chr7_NW_015973501v1_random 469 75 - 19153 CACCAGGGATCCGACATCACTGGCCCCATCCCGTAGGGTGGGCTGTGGG--CAGGGAACAGCTGAATCGCCA-GGCCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 63149 75 - 432965 CACCAGGGATCCGACATCACTGGCCCCATCCCGTAGGGTGGGCTGTGGG--CAGGGAACAGCTGAATCGCCA-GGCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 118206 75 + 85365473 CACCAGGGATCCGACATCGCTGGCCCCATCCCGTAGGGTCGGCTGTGGG--CAGGGAACAGCTGAATCGCCA-CGCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 151849132 75 - 185818997 CACCAGGGATCCGACATCACTGGCCCCATCCCGTAGGGTGGGCTGTGGG--CAGGGAACAGCAAAATCGCCA-CGcca i rheMac8.chr3 T 26888 C 0 s macFas5.chr3 158708173 75 - 192294377 CACCAGGGATCCGACATCACTGGCCCCATCCCGTAGAGTGGGCTGTGGG--CAGGGAACAGCAAAATCGCCA-CGcca i macFas5.chr3 T 26903 C 0 s cerAty1.NW_012002954v1 4975446 75 + 21915920 CACCAGGGATCTGACATCACTGGCCCCATCCCATAGGGTGGGCTGTGGG--CAGGGAACAGCAAAATCGCCA-CGcca i cerAty1.NW_012002954v1 T 29577 n 286 s chlSab2.chr28 21455306 75 + 21531802 CACCAGGGATCCGACATCACCGGCCCCATCCCGTAGGGTGGGCTGTGGG--CAGGGAACAGCAAAATCGCCA-CGcca i chlSab2.chr28 T 26193 C 0 s manLeu1.NW_012101810v1 2414090 75 + 2515279 CACCAGGGATCTGACATCACTGGCCCCATCCCATAGGGTGGGCTGTGGG--CAGGGAACAGCAAAATCGCCA-CGcca i manLeu1.NW_012101810v1 T 26742 C 0 s colAng1.NW_012117710v1 6328666 75 - 6586416 CACCAGGGATCCGACATCACTGACCCCATCCCGTAGGGTGGGCTGTGGG--CAGGGAACAGCAAAATTGCCA-CGcca i colAng1.NW_012117710v1 T 26162 C 0 s calJac3.chr2 146631682 75 - 204313951 CATCAGAAATCTGACATCATTGGCCCCATCACATAGGGTGGGCTGTGGG--CAGGGAATAACCAAATCACCA-CACCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 332102 77 - 2409723 CATCAGGGATCCAGCATCATTGGCCCCATCACACGGGGTGGGCTCTGGGGACAGGGAACAGCCGAATCACCA-CGCCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 467126 75 - 2125214 CATCAGGGATCCGACGTCATTGGCCCCATCACATAGGGTGGGCTGTGGG--CAGGGAATAGCCAAATCGCCA-CGCCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198776 72 - 8137123 CACCAGGGAGCTGATGCCACCGCCTTGTTTCCTGGGGGAAGG----GGA--CAGAGGATAGCCAAACTGTCAGGGCCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e macNem1.NW_012019910v1 4347295 269 - 9440265 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=7800.000000 s hg38.chr7_KI270899v1_alt 102380 1 + 190869 C s panTro5.chr7_NW_015973501v1_random 544 1 - 19153 C i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 63224 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 118281 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 151849207 1 - 185818997 c i rheMac8.chr3 C 0 n 0 s macFas5.chr3 158708248 1 - 192294377 c i macFas5.chr3 C 0 C 0 s chlSab2.chr28 21455381 1 + 21531802 c i chlSab2.chr28 C 0 n 0 s manLeu1.NW_012101810v1 2414165 1 + 2515279 c i manLeu1.NW_012101810v1 C 0 n 0 s colAng1.NW_012117710v1 6328741 1 - 6586416 c i colAng1.NW_012117710v1 C 0 n 0 s calJac3.chr2 146631757 1 - 204313951 C i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 332179 1 - 2409723 C i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 467201 1 - 2125214 C i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198848 1 - 8137123 C i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e cerAty1.NW_012002954v1 4975521 286 + 21915920 I e macNem1.NW_012019910v1 4347295 269 - 9440265 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=37502.000000 s hg38.chr7_KI270899v1_alt 102381 24 + 190869 TCTCAGACCCTTGGCAGACACAAG s panTro5.chr7_NW_015973501v1_random 545 24 - 19153 TCTCAGACCCTTGGCAGACACAAG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 63225 24 - 432965 TCTCAGACCCTTGGCAGACACAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 118282 24 + 85365473 TCTCAGACCCTTGGCAGACACAAG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 158708249 19 - 192294377 acaaagac-----gtggacacaag i macFas5.chr3 C 0 n 0 s calJac3.chr2 146631758 24 - 204313951 TTTCAGACCCTTGGCAGACACAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 332180 24 - 2409723 TTTCAGACCCTCAGCAGACACAGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 467202 24 - 2125214 TTTCAGACCCTCAGCAGACACAGG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198849 11 - 8137123 -----------TGTCATGCAGT-- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 6328742 0 - 6586416 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 21455382 0 + 21531802 I e manLeu1.NW_012101810v1 2414166 0 + 2515279 I e cerAty1.NW_012002954v1 4975521 286 + 21915920 I e macNem1.NW_012019910v1 4347295 269 - 9440265 I e rheMac8.chr3 151849208 0 - 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=30118.000000 s hg38.chr7_KI270899v1_alt 102405 22 + 190869 GAATAACAGCTGTGGCCGCCGC s panTro5.chr7_NW_015973501v1_random 569 22 - 19153 GAATAACAGCTGTGGCCGCCGC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 63249 22 - 432965 GAATAACAGCTGTGGCTGCCGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 118306 22 + 85365473 GAATAACAGCTGTGGCTGCCGC i nomLeu3.chr20 C 0 C 0 s calJac3.chr2 146631782 22 - 204313951 GAATAACAGTTCTGTCTGCTGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 332204 22 - 2409723 GAATAATGGCTGTGTCTGCCAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 467226 22 - 2125214 GAATAACAGCTGTGTCTGCCAC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198860 3 - 8137123 GAA------------------- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 6328742 0 - 6586416 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 21455382 0 + 21531802 I e manLeu1.NW_012101810v1 2414166 0 + 2515279 I e cerAty1.NW_012002954v1 4975521 286 + 21915920 I e macNem1.NW_012019910v1 4347295 269 - 9440265 I e macFas5.chr3 158708268 0 - 192294377 I e rheMac8.chr3 151849208 0 - 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=69605.000000 s hg38.chr7_KI270899v1_alt 102427 16 + 190869 TGTGGCCGCAGTCCCA s panTro5.chr7_NW_015973501v1_random 591 16 - 19153 TGTGGCCGCAGTCCCG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 63271 16 - 432965 TGTGGCCGCAGTCCCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 118328 16 + 85365473 TGTGACCGCAGTTCCG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33969863 16 + 185818997 TGTGGCTGCAGCTCCC i rheMac8.chr3 I 269 C 0 s macFas5.chr3 33586202 16 + 192294377 TGTGGCTGCAGCTCCC i macFas5.chr3 I 269 C 0 s macNem1.NW_012019910v1 4347564 16 - 9440265 TGTGGCTGCAGCTCCC i macNem1.NW_012019910v1 I 269 C 0 s manLeu1.NW_012101810v1 101187 16 - 2515279 TGTGGCTGCAGCTCCC i manLeu1.NW_012101810v1 I 269 C 0 s calJac3.chr2 146631804 16 - 204313951 TGTGACCACAGTTCCG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 332226 16 - 2409723 TGTGACCACAGTTCCG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 467248 16 - 2125214 TGTGACCGCAGTTCCG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198863 14 - 8137123 --TGAGTGCAGTTCCA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 6328742 0 - 6586416 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 21455382 0 + 21531802 I e cerAty1.NW_012002954v1 4975521 286 + 21915920 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=5657044.000000 s hg38.chr7_KI270899v1_alt 102443 851 + 190869 AAGTTTGGAGAGAAATAGCAGCAAGTAGCAGCACCACTGTCCGTCAGCTT------------------------------GAGTGCTTCTCGGACAAAGGAAGACAGTTCTCCTGTTTCCCAAAGACTTGCAAAGGCTGTGTGTTCCTCAGGCAGCTACTGC-GCCATCGGCCTCTGA-GTGATAAGGAAAGGAACCAGGGCTCAAACCTACTCCTGAGTGAGTCAAAGC-AACTCCGCACTCCCTGCCAGCACTGAGGGTGACCCCCGAGCCCTGCTCAGGAG-CTGTGGGGCCCGAGATCTCCCCTCCGCCCCGTGGGCAGGGGAAGGGCAGCAAAGGCTCTCTGCCACGCCTGTGTTCGGGCTCCAGAACTCTTGGCCTGGTGTCTGGAAGATGGGATTGCTGCCTTGGACAAGCCTCTCCTCCTTGCTTTTCCCTTTTTCTCACAGTGGGGTTTAAGCTAAGGTCCTATTCCTAGATCACTAATAATGATAGCAGGTGCcatttatgaa-caccta-ctgtatcccagtgctgctctcagtgctgtacctgtattctctcatctcat--tctctcaagggccc--------agtaaggtagccacttc-attagccatcttttactaaagagcagactaggcacagagac----ggtaggtcactttctgaaggtcacacagcgaatgcaggtgagaaccaggctgtccacgaaggaagtctgacccctgattgggctgtaatcactgtgctgtgcAGACACCCTCTCCATCAAGACCCTTCTGTGTTGCA-CCCCCCACCCCCACCCCCTTCTCTGCTTGGAAATGAAGTA-GCTTTCAGGGGACTCTTATGAGGCTCCCGCCTCCCCAGGCTGG-CCCCACACAGCCCCAAGACAGGAG s panTro5.chr7_NW_015973501v1_random 607 851 - 19153 AAGTTTGGAGAGAAATAGCAGCAAGTAGCAGCACCACTGTCCGTCAGCTT------------------------------GAGTGCTTCTCGGACAAAGGAAGACAGTTCTCCTGTTTCCCAAAGACTTGCAAAGGCTGCGTGTTCCTCAGGCAGCTACTGC-GCCATCGGCCTCTGA-GTGATAAGGAAAGGAACCAGGGCTCAAACCTACTCCTGAGTGAGTCAAAGC-AACTCCGCACTCCCTGCCAGCACTGAGGGTGACCCCCGAGCCCTGCTCAGGAG-CTGTGGGGCCCGAGATCTCCCCTCCGCCCCGTGGGCAGGGAAAGGGCAGCAAAGGCTCTCTGCCACGCCTGTGTTCGGGCTCCAGAACTCTTGGCCTGGTGTCTGGAAGATGGGATTGCTGCCTTGGACAAGCCTCTCCTCCTTGCTTTTCCCTTTTTCCCACAGTGGGGTTTAAGCTAAGGTCCTATTCCTAGATCATCAATAATGATAGCAGGTGCcatttatgaa-caccta-ctgtatcccagtgctgctctcagtgctgtacctgtattctctcatctcat--tctctcaagggccc--------agtaaggtagccacttc-attagccatcttttactaaagagcagactaggcacagagac----ggtaggtcactttctgaaggtcacacagcgaatgcaggtgagaaccaggctgtccacgaaggaagtctgacccctgattgggctgtaatcactgtgctgtgcAGACACCCTCTCCATCAAGACCCTTCTGTGTTGCA-CCCCCCACCCCCACCCCCTTCTCTACTTGGAAATGAAGTA-GCTTTCAGGGGACTCTTATGAGGCTCCCACCTCCCCAGGCTGG-CCCCACACAGCCCCAAGACAGGAG i panTro5.chr7_NW_015973501v1_random C 0 I 1 s gorGor5.CYUI01015914v1 63287 850 - 432965 AAGTTTGGAGAGAAATAGCAGCAAGTAGCAGCACCACTGTCCGTCAACTT------------------------------GAGTGCTTCTCAGACAAAGGAAAACAGTTCTCCTGGTTCCCAAAGACTTGCAAAGGCTGTGTGTTCCTCAGGCAGCTACTGCGGCCATCGGCCTCTGA-GTGATAAGGAAAGGAACCAGGGCTCAAACCTACTCCTGAGTGAGTCAAAGCAAACTCCGCACTCCCTGCCAGCACTGAGGGTGACCCCCGAGCCCTGCTCAGGTG-CTGTGGGGCCCGTGATCTCCCCTCCGCCCCGTGGGCCGGGAAAGGGCAGCAAAGGCTCTCTGCCACGCCTGTGTTCGGGCTCCAGAACTCTTGGCCTGGCGTCTGGAAGATGGGATTGCTGCCTTGGACAAGCC-CTCCTCCTTGCTTTT-CCTTTTTCCCACAGTGGGGTTTAAGCTAAGGCCCTATT-CTAGATCACCAATAATGATAGCAGGTGCcatttatgaa-caccta-ctgtatcccagtgctgctctcggtgctgtacctgtattctctcacctcat--tctctcaagggccc--------agtaaggtagccacttc-actagccatcttttactaaagagcagactaggcacagagat----ggtaggtcactttctgaaggtcacacagcgaatgcaggtgagaaccaggctgtccacgaaggaagtctgacccctgattgggctgtaatcactgtgctgtgcAGACACCCTCTCCATCAAGA-CCTTCTGTGTTGCA-CCCCCCACCCCCA-CCCCTTCTCTACTTGGAAATGAAGTAGGCTTTCAGGGGACTCTTATCAGGCTCCCACCTCCCCAGGCTGGCCCCCACACAGCCCCAAGACAGGAG i gorGor5.CYUI01015914v1 C 0 I 1 s nomLeu3.chr20 118344 779 + 85365473 AAGTTTGGAGAGAAATAGCAGCAAG---------------------------------------------------------------------------------------------ATCAAAGACTTGCAAAGGCTGTGCGTTCTTCAGGCAGCTACTGT-GCCGTCAGCCTCTGA-GTGATAAGGAAAGGAACCTGGGCTCAGTCCTATTCCTGAGTGAGTCAAAGC-AACTCCACACTCCCTGCCAGCACCGAGGGTGA-CCCCAAGCCCTGCTCAGGGG-CTGTGGGGGCTGAGATCTCCCCTCCCCACCGTGGGCAGCGAAAGGGCAGCAAAGGCTCTCTGCCACGCCTGTGTTCGGGCTCCAGAACTCTTGGCCTGGTGTCTGGAAGATGGGATTGCTGCTTTGGACAAGCCCCTCCTCCTTGCTTTTCCCTTTTTCCCACAGTGGGGTTTAAGCTAAGGTCCTATTCCTAGATCACTAACaatgatagcaggcaccatttatgaa-cacctg-ctgtatcccagtgctgccctcagtgctgtacctatattctctcacctcat--tctctcaagggccc--------agtaaggtagccacttc-attagccatcgtttattaaagagcagactaggcacagagat----ggtaggtcgctttctgaaggtcacacagcgaatgcaggtgaaaaccaggctgtccacaaaggaagtctggcccctgattgggctgtaatcactgtgctCTGCAGA-ACCCTC-CCATCAAGACCCTTCTGTGTTGCG-CCCCCCAC------CCCCTTCTCTACTTGGAAATGAAGTA-GCTTTCAGGGGACTCTTATCAGGCTCCCGCCTCCCCAGGCTGG-CCCCACACAGCCCCAAGACAGGAG i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 33969879 819 + 185818997 AAGTTTGAAGAGAAATAGCAGCAAGTGGTGGCACCACTGTCCATCAGCTT------------------------------GAGTGCTTCTCGGAGAAAGGAAGACAGTTCTCTTGGTGCCCAAAGAC-----AAGGCTGTGTGTTCTTCAGGCAGCTACTGT-GCCATCGGCCTCCGA-GTGATAAGGAAAGGAACCTGGGCTCAATCCTATTCCTGA--------------------------CTGCCAGTGCTGAGGATGACCCCCGTGCCCTGCTCAGGGGTCCGTGGGG-CCGAGAGCTCCCCTTCCGGCTGTGGGCATTGAAAGGGCAGCAAAGGCTCTGTGCCACACCTGTGTTCGGGCTCCAGAGCCCTTGGCCTGGTGTCTGGAAGATGGGACTGCTGCCTTGGACAAGTCCCTCCTCCCTGGTTTTCCCTGTTTCCCAGAGTGGGGTTGAAGTTAAGGTCC-ATTCCGATATCACTAATaatgatagcaggtgccacttatgag-catttc-ctgtgtcccggtgctgctctccgtgccgcacctgtattctctcacctcgc--tctctcaagggccc--------agtaagacagccacttc-attagccatcttgtattgaagagcagacta-gcacagagac----ggtagtttgctttcagcaggtcacacagcaaatacaggtgaaaaccaggctgtccacgaaggaagtctgacCACTGATTGGGCCATGATCTCTGTGCTGTGCAGACACCATCTCCATCAAGACCCTTCTGTGTTGTG-CCCGCCACCCCCACCCCCTTCTCTACTTGGAAATGAAGTA-GCTTTCAGGGGACTCTTACCAGGTTCCTGCCTCCCCATGCTGG-CCCCACAAAGCCCCAAGATAGGAG i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33586218 818 + 192294377 AAGTTTGAAGAGAAATAGCAGCAAGTGGTGGCACCACTGTCCATCAGCTT------------------------------GAGTGCTTCTCGGAGAAAGGAAGACAGTTCTCTTGGTGCCCAAAGAC-----AAGGCTGTGTGTTCTTCAGGCAGCTACTGT-GCCATCGGCCTCCGA-GTGATAAGGAAAGGAACCTGGGCTCAATCCTATTCCTGA--------------------------CTGCCAGTGCTGAGGATGACCCCCGTGCCCTGCTCAGGTG-CCGTGGGG-CCAAGAGCTCCCCTTCCGGCTGTGGGCATTGAAAGGGCAGCAAAGGCTCTGTGCCACGCCTGTGTTCGGGCTCCAGAGCCCTTGGCCTGGTGTCTGGAAGATGGGACTGCTGCCTTGGACAAGTCCCTCCTCCCTGGTTTTCCCTGTTTCCCAGAGTGGGGTTGAAGTTAAGGTCC-ATTCCGATATCACTAATAATGATAGCAGGTGCcacttatgag-cacttc-ctgtgtcccggtgctgctctctgtgccgcacctgtattctctcacctcgc--tctctcaagggccc--------agtaagacagccacttc-attagccatcttgtattgaagagcagacta-gcacagagac----ggtagtttgctttcagcaggtcacacagcaaatacaggtgaaaaccaggctgtccacgaaggaagtctgaccactgattgggccatgatcactgtgctgtgcAGACACCATCTCCATCAAGACCCTTCTGTGTTGTG-CCCGCCACCCCCACCCCCTTCTCTACTTGGAAATGAAGTA-GCTTTCAGGGGACTCTTACCAGGTTCCTGCCTCCCCATGCTGG-CCCCACAAAGCCCCAAGATAGGAG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4347580 818 - 9440265 AAGTTTGAAGAGAAATAGCAGCAAGTGGTGGCACCACTGTCCATCAGATT------------------------------GAGTGCTTCTCGGAGAAAGGAAGACAGTTCTCTTGGTGCCCAAAGAC-----AAGGCTGTGTGTTCTTCAGGCAGCTACTGT-GCCATCGGCCTCCGA-GTGATAAGGAAAGGAACCTGGGCTCAATCCTATTCCTGA--------------------------CTGCCAGTGCTGAGGATGACCCCCGTGCCCTGCTCAGGTG-CCGTGGGG-CCGAGAGCTCCCCTTCCGGCTGTGGGCATTGAAAGGGCAGCAAAGGCTCTGTGCCACGCCTGTGTTCGGGCTCCAGAGCCCTTGGCCTGGTGTCTGGAAGATGGGACTGCTGCCTTGGACAAGTCCCTCCTCCCTGGTTTTCCCTGTTTCCCAGAGTGGGGTTGAAGTTAAGGTCC-ATTCCGATATCACTAATAATGATAGCAGGTGCcacttatgag-cacttc-ctgtgtcccggtgctgctctccgtgccgcacctgtattctctcacctcgc--tctctcaagggccc--------agtaagacagccacttc-attagccatcttgtattgaagagcagacta-gcacagagac----ggtagtttgctttcagcaggtcacacagcaaatacaggtgaaaaccaggctgtccacgaaggaagtctgaccactgattgggccgtgatcactgtgctgtgcAGACACCATCTCCATCAAGACCCTTCTGTGTTGTG-CCCGCCACCCCCACCCCCTTCTCTACTTGGAAATGAAGTA-GCTTTCAGGGGACTCTTACCAGGTTCCTGCCTCCCCATGCTGG-CCCCACAAAGCCCCAAGATAGGAG i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16940488 818 - 21915920 AAGTTTGAAGAGAAATAGCAGCAAGTGGTGGCACCACTGTCTATCAGCTT------------------------------GAGTGCTTCTCGGAGAAAGGAAGACAGTTCTCTTGGTGCCCAAAGAC-----AAGGCTGTGTGTTCTTCAGGCAGCTACTGT-GCCATCGGCCTCCAA-GTGATAAGGAAAGGAACCTGGGCTCAATCCTATTCCTGA--------------------------CTGCCAGCGCTGAGGATGACCCCCGTGCCCTGCTCAGGTG-CCGTGGGG-CCGAGAGCTCCCCTTCTGGCTGTGGGCATTGAAAGGGCAGCAAAGGCTCTGTGCCACACCTGTGTTCGGGCTCCAGAGCCCTTGGCCTGGTGTCTGGAAGATGGGACTGCTGCCTTGGACAAGTCCCTCCTCCCTGGTTTTCCCTGTTTCCCAGAGTGTGGTTGAAGTTAAGGTCC-ATTCCGATATCACTAATAATGATAGCAGGTGCcatttatgag-cacttc-ctgtgtcccagtgctgctctccgtgccgcacctatattctctcacctcgc--tctctcaagggccc--------agtaaggcagccacttc-attagccatcttgtattgaagagcagacta-gcacagagac----aatagtttgctttcagcaggtcacacagcaaatacaggtgaaaaccaggctgtccacgaaggaagtctgaccactgattgggccgtgatcactgtgctgtgcAGACACCCTCTCCATCAAGACCCTTCTGTGCTGCG-CCCGCCACCCCCACCCCCTTCTCTATTTGGAAATGAAGTA-GCTTTCAGGGGACTCTTACCAGGTTCCTGCCTCCCCATGCTGG-CCCCACAAAGCCCCAAGATAGGAG i cerAty1.NW_012002954v1 I 286 I 1 s chlSab2.chr28 76510 817 - 21531802 AAGTTTGAAGAGAAATAGCAGCAAGTGGTGGCACCACTATCCATCAGCTT------------------------------GAGTGCTTCTCGGAGAAAGGAAGACAGTTCTCTTGGTGCCCAAAGAC-----AAGGCTGTGTGTTCTTCACGCAGCTACTGC-GCCATCGGCCTCCGA-GTGATAAGGAAAGGAAACTGGGCTCAATCCTATTCCTGA--------------------------CTGCCAGCGCTGAGGGTGACCCCCGAGCCCTGCTCAGGTG-CCGTGGGG-CCGAGTGCTCCCCTTCCCGCCGTGGGCATTGAAAGGGCAGCAAAGGCTCTGTGCCACGCCCATGTTCGGGCTCCAGAGCCCTTGGCCTGGTGTCTGGAAGATGGGACTGCTGCCTTGGACAAGTCCCTCCTCCCTGG-TTTCCCCGTTTCCCACAGTGGGGTTGAAGTTAAGGTCC-ATTCCCAGATCACTAATaatgatagcaggtgccatttatgag-cacctc-ctgtgtcccggtgctgcgctccctgccgcacctgtattctctcacctggc--tctctcaagggtgc--------agtaaggtagccacttc-attagccgtcttgtattaaagagcagacta-gcacagagac----ggcagtttgctttcggcaggtcacacagcaaatacaggtgaaaaccaggctgtccacaaaggaagtctgaccactgattgggccgtgatcactgtgctgtgcAGACACCCTCTCCATCAAGACCCTTCTGTGTTGCG-CCCGCCACCCCCACCCCCTTCTTTACTTGGAAATGAAGTA-GCTTTCAGGGGACTCTTACCAGGTTCCTGCCTCCCCAGGCTGG-CCCCACACAGCCCCAAGATAGGAG i chlSab2.chr28 I 285 I 1 s manLeu1.NW_012101810v1 101203 818 - 2515279 AAGTTTGAAGAGAAATAGCAGCAAGTGGTGGCACCACTGTCCATCAGCTT------------------------------GAGTGCTTCTCGGAGAAAGGAAGACAGTTCTCTTGGTGCCCAAAGAC-----AAGGCTGTGTGTTCTTCAGGCAGCTACTGT-GCCATCGGCCTCCAA-GTGATAAGGAAAGGAACCTGGGCTCAATCCTATTCCTGA--------------------------CTGCCAGCGCTGAGGATGACCCCCGTGCCCTGCTCAGGTG-CCGTGGGG-CCGAGAGCTCCCTTTCCGGCTGTGGGCATTGAAAGGGCAGCAAAGGCTCTGTGCCACGCCTGTGTTCGGGCTCCAGAGCCCTTGGCCTGGTGTCTGGAAGATGGGACTGCTGCCTTGGACAAGTCCCTCCTCCCTGGTTTTCCCTGTTTCCCAGAGTGGGGTTGAAGTTAAGGTCC-ATTCCGATATCACTAATAATGATAGCAGGTGCcatttatgag-cacttc-ctgtgttccagtgctgctctccgtgccgcacctatattctctcacctcgc--tctctcaagggacc--------agtaaggcaaccacttc-attagccatcttgtattgaagagcagacta-gcacagagac----aatagtttgctttcagcaggtcacacagcaaatacaggtgaaaaccaggctgtccacgaaggaagtctgaccactgattgggccgtgatcactgtgctgtgcAGACACCCTCTCCATCAAGACCCTTCTGTGTTGCG-CCCGCCACCCCCACCCCCTTCTCTATTTGGAAATGAAGTA-GCTTTCAGGGGACTCTTACCAGGTTCCTGCCTCCCCATGCTGG-CCCCACAAAGCCCCAAGATAGGAG i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 257764 792 + 6586416 AAGTTTGAAGAGAAATAGCAGCAAGTGGTGGCACCACTGTCCATCAGCTT------------------------------GAGTGCTTCTGGGAGAAAGGAAGGCAGTTCTCT---TGTCCAAAGAC-----AAGGCTGTGTGTTCTTCAGGCAGCTACTGT-GCCATCGGCCTCCGA-GTGATAAGGAAAGGAACCTGGGCTCAATCCTATTCCTGA--------------------------CTGCCAGCGCTGAGGGTGAGCCCCGAGCCCTGCTCAGGTG-TCGTGGGG-CCGA-------------------GGGCATTGGAAGGGCAGCAAAGGCTCTGTGCTACGCCCGTGTTCGGGCTCCAGAGCCCTTGGCCTGGTGTCTGGAAGAT-GGACTGCTGCCTTGGACAAGTCCCTCCGTCCTGGTTTTCC--GTTTCCCACAGTG-GGTTGAAGTTAAGGTCC-ATTCCCAGATCACTAATAATGATAGCAGGTGCcatttatgag-cacctc-ctgtgtcccggtgctgctctctgtgccgtgcctgtattctctcacttcgc--tctctcaagggccc--------agtgaggtggccacttc-attagccatcttgtattaaagagcagacta-gcacagagac----ggtagtttgctttcggcaggtcacacagcaaatacaggtgaaaaccaggctgtccacgaaggaagtctgactgctgattaggccgtgatcactgtgctgtgcAGACACCCTCTCCATCAAGACCCTTCTGTGCTGTG-TCCCCCACCCCCAACCCCTTCTCTACTTGGAAACGAAGTA-GCTTTCAGGGGACTCTTACCAGGTTCCCGCCTCCCCAGGCTGG-CCCCACACAGCCCCAAGATAGGAG i colAng1.NW_012117710v1 I 285 I 1 s calJac3.chr2 146631820 815 - 204313951 AAGTTTGAAGAGAAAT---AGTAAGTGGTGGCACGGCTGTCTGTCAACTT------------------------------GAATGTTTCTCAAATAAAGGAAGACAGTTCCTTTGGCTCCCAAAGACTTACAAAGGCTGTATGTTCTTCAGGCAGCTACTAT-GCCATCAGACACTGA-GTGGTAAGGAAAGGAACCTGAGCCCAATCCCATTCTTGAGCGAGTCAGAGC-AACTCCACATTCCCTGCCAGCCCTGAGGGGGACCCCCAAGCACTGCTCCGGTG-CTGTGGGGGCTGAGATCTCCCCTCCCCACTGTGGGCATTG-AAGGGCAGCAAAGGCTCTCTGCCATGCTTGTGTTTGGGCACCAGACCTCTTGGCCTGGTGTCTGGAAGATGGGATTATTGCCTTGGACCAGTCCTTCCTCCTTGGTTTTCCCTTTTTCCCACAATGGGGTTAAAGCTCAGGTCCTCTTCCTAGCTCCATaataatgacagcaggcaccatttacaaa-cacctctccatatcccagttctgctcccagtgctgtacctgtattctttcacatcat--tctctcaagggccc--------agtaaggtagccacttc-attaaccatcttttataaaagagcaggctaggcacagagat----ggtagataacttcctgaaggtcaca-aatgaatgcaggtaagaaccaggctgtgcaccaagtaagtctgagccctgatcaggctttaatcactgtgctgtgcAGATGTCCT----ATCAAGGCCCGTCTGTTTGGTG-TCCCCCATTCCCACCTCCCTCTCTACTTGGAAATGAAGTC-ACTTTCAGGGGACTTTTGTGGGGTTCCTGCCTCCCCA----GG------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 332242 815 - 2409723 AAGTTCGAAGAGAAATAGCAGCAAGTGGTGGCACAG----CTGTCAACTT------------------------------GAATGCTTCTCAGAGAAAGGAAGACAGTTCCTTTGGCTCCCAAAGACTTGCAAGGGCTGTGTGTTCTTCAGGCAGCTACTGT-GCTGTCAGACTCTGA-GTGGTAAGGAAAGGAACCTGGGCCCAATCCCACTCTTGAGTGAGTCACAGC-AACTCCGCATTCCCTGCCAGTGCTGAGGGGGACCCCCAAGCACTGCTCAGGTC-CTCTGAGGGCCAAGATCTTCCCTTGCCACCATGGGCATTG-AAAGGCAGCAAAGGCTCTCTGCCACGCTTGTGTTTGGACACCAGACCTCTTGGCCTGGTGTCTGGAACATGGGATGATTGCCTTGGACCAGTCCCTCCTCCTTGGTTTTTCCTTTTTTCCACAGTGGGGTTAAAGCTAAGGTCCTCTTCCTAGATCAACAGTaatgacagcaggcgccatttacaaa-cacccctccatatcccagttctgctcccagtgctgtgcctgtattctctcacgtcat--tctctcaagggcac--------agtaagtcagccacttc-atgaaccatcttttatgaaagaacagactaggcacagagat----ggtaggtagcttcctgaaggtcacacagtgaatgcaggtgagaaccaggctgtgcaccaaggaagtctgagccctgatcagg-tgtaatcaccatgctgtgcAGACGCCCTCTCCATCGAAGCCCTTCTGTGTGGTG---CCCCATCCCCACCTCCCTCTCTGCTTGGAAATGAAGTC-ACTTTCA-GAAACTTTTGTGGGGCTCCTGCCTCCCCA----GG------------------------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 467264 828 - 2125214 AAGTTTGAAGAGAAATAGCAGCAAGTGGTGGCACGGCTGTCTGTCAACTT------------------------------GAATGCTTCTCAGAGAAAGGATGACAGTTCCTTCGGCTCCCAAAGACTTGGAAAGGCTGTGTATTATTCAGGCAGCTACTGT-GCCATCAGACTCTGA-GTGGTAAGGAAAGGAACCTGGACCCAATCCCATTCTTGAGTGAGTCAGATC-AACTCCGCATTCCCTGCCAGCACTGAGGGGGACACCTAAGCACTGTTCAGGTG-CTGTGGGGGCCGAGATCTCCCTTCCCAACCATGGGCATTG-AAGGGCAGCAAAGGCTCTCCGCCACGCTTGTGTTCGGGCATCAGGCCTCTTGGCCTGGTGTCTGGAACATGGGATTATTGCCTTGGGCCAGTCCCTCCTCCTTGGTTTTCCCTTTTTCCCACA-TGGAGTTAAAGCTAAGGTCCTCTTCCTAGATCAATAATAATTACAGCAGGcaccatttacaaa-cacctctccatatcccagttctgctcccagtgctgtacctgtattctctcacgtccttctctctcaagggccc--------agtaaggtagccacttc-attaaccatcttttatgaaagagcagactaggcacagagatggtaggtaggtagcttcctgaaggtcacacagtgaatgcaggtgagaaccaggctgtgcaccaaggaagtctgagccctgaccgggctttaatcaccatgctgtgcAGATGCTCTCTCCATCAAGGCCCTTCTGTGTGGTGCCCCCTCATCCCCACCTCCCTCTCTACTTGGAAATGAAGTC-GCTTTCA-GAAACTTTTGCGGGGTTCCTGCCTCCCCA----GG------------------------- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2198877 807 - 8137123 AGGGTTGACGGGAAATAACAGGAAGTGGAGGCCCCACTCTCAGTCTACTGGAAAGGATCCTGCGGTGAGATAAGGAGACAGAGCACTTCCCAGAAAAAGGAAGACCCTTCTCTTGGTCCTCAGAGACTTGGGAATACTGTGTGTTCCTCAGGCAGGTTCTGA-GCCATCAGCCTTTGAGGTGATAATGGAGAGAACCAG------------TTTCTGA------------------------------CAGTGTTGA-GATGACTACTGTCTGCTGCTCTGGGG-CTCTGGGGGCCACG--TCCCCATTTTCACCAT-GGCACTGG---------ACAGGCTGTGTGCCACAGTCGTGCTTG--CAGCAAAGCTCTTGACATGGTGGCTGGAAGGCAAAACTGCTACCTCGGACATGTCCTTTTTCTTTGGTTTTCCATTTTTGT-ACAAGAAGATGTAAGCCAAGGTCCTACTGTCAGATCaataata-----agcagctgctatttattaaccacgta-ccgtattccagttctactctcagtgccatatgtatattctcttgcacaat--tctctcaatagcccccaaaggtaaaaagataactacttctattagccatcttttattaaagaacagactaggcacagagat----gttaggtagctttctgagggtcacacagctaatctaagttagaaccagaccatgtgccaagacagtctggccccc-actgggctttaaacaccatggcatgcAGACACAGT--CCATTAAGACTCTTCTGTGTGGGG-CCCTCC--------------------CTGGAAGTAAAGTA-GCTTCCAGGAGACACTTACAGGGTTCCTGCCTCCCTGGGCTGG-CCCCACACAGCCCTAAGATAGAAG i otoGar3.GL873611 C 0 I 150 e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=72155.000000 s hg38.chr7_KI270899v1_alt 103294 15 + 190869 CCCCCAGTGGC-------------------------GCCT s panTro5.chr7_NW_015973501v1_random 1459 15 - 19153 CCCCCAGTGGC-------------------------GCCT i panTro5.chr7_NW_015973501v1_random I 1 C 0 s gorGor5.CYUI01015914v1 64138 15 - 432965 CCCCCAGTGGC-------------------------GCCT i gorGor5.CYUI01015914v1 I 1 C 0 s nomLeu3.chr20 119124 15 + 85365473 CCCCCAGTGGC-------------------------GCCT i nomLeu3.chr20 I 1 C 0 s rheMac8.chr3 33970699 15 + 185818997 CCCCGAGTGGT-------------------------GCCT i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33587037 15 + 192294377 CCCCGAGTGGT-------------------------GCCA i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4348399 15 - 9440265 CCCCGAGTGGT-------------------------GCCT i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16941307 15 - 21915920 CCCCGAGTGGC-------------------------GCCT i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 77328 15 - 21531802 CCCCAAGTGGT-------------------------GCCT i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 102022 15 - 2515279 CCCCGAGTGGC-------------------------GCCT i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 258557 15 + 6586416 CCCCGAGTGGC-------------------------GCCT i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chr2 146632635 7 - 204313951 --------GGC-------------------------ACCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 333057 7 - 2409723 --------GGC-------------------------ACCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 468092 7 - 2125214 --------GGC-------------------------ATCT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2199834 40 - 8137123 ctcccagtagctgggactacaggcccccaccacaatgcct i otoGar3.GL873611 I 150 I 123 e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=4586862.000000 s hg38.chr7_KI270899v1_alt 103309 612 + 190869 TGGTGGGCTTCTTGAGGGTTGCCTTAATCTTCCCCAGCCACCCACGGGAGACACCTGAGGTTTGTGGCTTGTGCCACGCGGCTCCAGGG---CCTCCAGCACCCACCTGCAGACAC-GGCTTCAGCCGGCCCATGCTCCTTCTGTTTCTTTCGCTAGCTTGTTTAGGTTTCATTCACAAACAGTAAAGCCCAT----------TCATGtgacagttgtatacagtcatgtaacatctaccacagtcaagatgtgg-aacatttcattctcctaaaaagtgttc----tcctgcccctttag--attccctcctccagctcccagccccaggcagacagtgatctgattcctgtccctgtaactttgcctttcctggaagctcataga-----catggaacagtactcta----------------tctcttccacttaacttgatgatttcaagacttat-ccatgtcgtgtaggc-ttaatattttgttcattttttattaatgggtagtatctcataatatgcatgcaccgtaggttaccaacttgcctgttgatgggcatttgggctgtttgcagtttggatgtattacaaataacattggtgtgagcacttgtgtccacgtctttgtgtggacatatgttttcattttc-------------ctg s panTro5.chr7_NW_015973501v1_random 1474 612 - 19153 TGGTGGGCTTCTTGAGGGTTGCCTTAATCTTCCCCAGCCACCCACGGGAGACACCTGAGGTTTGTGGCTTGTGCCACGCGGCTCCAGGG---CCTCCAGCACCCACCTGCAGACAC-GGCTTCAGCCGGCCCATGCTCCTTCTGTTTCTTTCCCTAGCTTGTTTAGGTTTCATTCACAAACAGTAAAGCCCAT----------TCATGtgacaattgtatacagtcatgtaacatctaccacagtcaagatgtgg-aacatttcattctcctaaaaagtgttc----tcctgcccctttag--attccctcctccagctcccagccccaggcagacagtgatctgattcctgtctctgtaactttacctttcctggaagctcataga-----catggaacagtactcta----------------tctcttccacttaacttgacgatttcaagactcat-ccatgtcgtgtaggc-ttaatattttgttcattttttattaatgggtagtatctcataatatgcatgtaccgtaggttaccaacttgcctgttgatgggcatttgggctgtttgcagtttggatgtattacaaataacattggtgtgagcacttgtgtccacgtctttgtgtggacatatgttttcattttc-------------ctg i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 64153 612 - 432965 TGGTGGGCTTCTTGAGGGTTGCCTTAATCTTCCCCAGCCACCCACGGGAGACACCTGAGGTTTGTGGCTTGTGCCACGCGGCTCCAGGG---CCTCCAGCACCCACCTGCAGACAC-GGCTTCAGCCGGCCCATGCTCCTTCTGTTTCTTTCCCTAGCTTGTTTAGGTTTCATTCACAAACAGTAAAG-CCAT----------TCATGtgacagttgtatacagtcatgtaacatctaccacagtcaagacgtggaaacatttcattctcctaaaaagtgttc----tcctg-cccttcag--attccctcctccagctcccagccccaggcagacagtgatctgattcctgtccctgtaactttgcctttcctggaagctcataga-----catggaacagtactcta----------------tctcttccacttaacttgatgatttcaagactcatcccatgtcgtgtaggc-ttaatattttgttcattttttattaatgggtagtatctcataatacacatgtaccgtaggttaccaacttgcctgttgatgggcatttgggctgtttgcagtttggatgtattacaaataacattggtgtgagcacttgtgtccacgtctttgtgtggacatatgttttcattttc-------------ccg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 119139 612 + 85365473 TGGTGGGCTTCTTGAGGGTTGCCTTAATCTTCCCCAGGCACCCACAGGACACACCTGAGGTTTGTGGCCCATGTAACGTGGCTCTGGGA---CCTCCAGCACCCACCTGCAGACAC-GGCTTCAGCTGGCCCATGCTGCTTCTGTTTCTTTCCCCAGCTTGTTTAATTTTCATTCACAAACAGTAAAGCCCAT----------TCATGtgacagttgtatacagtcatgtaacatttaccagagtcaagatgtgg-aacatttcattctcctaaaaagtgttc----tcctgccccttcag--gttccctcctccagctccaagccccaggcagacagtgatctgattcctgttcctgtaactttgcctttcctggaagctcacaga-----catggaacggtactcta----------------tctcttccacttaacttgatgatttcaagactcat-ccatgccgtgtgggc-ttaatattttgttcattttttattaatgggtagtatctcacaatatgcatgtaccataggttatcaacttgcctgttgatgggcatttgggctgtttgcagtttggatgtattacaaataacattggtgtgggcacttgtgtccacgtctttgtgtggacatacgttttcgttttc-------------ctg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33970714 623 + 185818997 TGGTGGGCTCCTTGAGGGTTGCCTCAATCAT-CCCAGGCACCCATAGGAGACATCTGAGGTTTGGGGTTTGTGCCACGCAACTCTGGGGCCTCCTCCGGCACCCACCTGCAGACAC-GGCTTCAGCCGGCCCATGCTCCTTCTGTTTCTTTCCCCAGCTTGCTTAGGTTTCATTCACAAACAGTAAAGCCCAT----------TCATGGgacagttgtatacagtcatgtaatatccaccacagtcaagatgtgt-aatatttcattctcctaacaagtgttc----tcatgcctcttcag--attccctcctccagctcccagccccaggcagacagtgatcggattcctgttcctgtgactttgcctttcctgggagcgcataga-----catggaagagtattctatctcttct-------ctctcttccacttaacttgatgatttccagactctt-ccatgtcgtgtgggc-ttaatattttgttcattttttatcaatgggtagaatctcataatatacatgaaccacaggttatcagtttgcctgttgatgggcatttgggctgtttgcagtttggatgtgttacaaataatgccggtgagagtacttgtgtccacgtctttgtgtggacatatgctttcattttc-------------ctg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33587052 623 + 192294377 TGGTGGGCTCCTTGAGGGTTGCCTCAATCAT-CCCAGGCACCCATAGGAGACATCTGAGGTTTGGGGTTTGTGCCACGCAACTCTGGGGCCTCCTCCGGCACCCACCTGCAGACAC-GGCTTCAGCCGGCCCATGCTCCTTCTGTTTCTTTCCCCAGCTTGCTTAGGTTTCATTCACAAACAGTAAAGCCCAT----------TCATGGgacagttgtatacagtcatggaatatccaccacagtcaagatgtgt-aatatttcattctcctaacaagtgttc----tcatgcctcttcag--attccctcctccagctcccagccccaggcagacagtgatcggattcctgttcctgtgactttgcctttcctgggagcgcataga-----catggaagagtattctatctcttct-------ctctcttccacttaacttgatgatttccagactctt-ccatgtcgtgtgggc-ttaatattttgttcattttttatcaatgggtagaatctcataatatacatgaaccacaggttatcagtttgcctgttgatgggcatttgggctgtttgcagtttggatgtgttacaaataatgccggtgagagtacttgtgtccacgtctttgtgtggacatatgctttcattttc-------------ctg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4348414 623 - 9440265 TGGTGGGCTCCTTGAGGGTTGCCTCAATCAT-CCCAGGCACCCATAGGAGACATCTGAGGTTTGGGGTTTGTGCCACGCAACTCTGGGGCCTCCTCCGGCACCCACCTGCAGACAC-GGCTTCAGCCGGCCCATGCTCCTTCTGTTTCTTTCCCCAGCTTGCTTAGGTTTCATTCACAAACAGTAAAGCCCAT----------TCATGGgacagttgtatacagtcatgtaatatccaccacagtcaagatgtgt-aatatttcattctcctaacaagtgttc----tcatgcctcttcag--attccctcctccagctcccagccccaggcagacagtgatcggattcctgttcctgtgactttgcctttcctggaagcgcataga-----catggaagagtattctatctcttct-------ctctcttccacttaacttgatgatttccagactctt-ccatgtcgtgtgggc-ttaatattttgttcattttttatcaatgggtagaatctcataatatacatgaaccacaggttatcagtttgcctgttgatgggcatttgggctgtttgcagtttggatgtgttacaaataatgccggtgagagtacttgtgtccacgtctttgtgtggacatatgctttcattttc-------------ctg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16941322 620 - 21915920 TGGTGGGCTCCTTGAGGGTTGCCTCAATCAT-CCCAGGCATCCATAGGAGACACTTGAGGTTTGGGGTTTGTGCCACGCAACTCTGGGG---CCTCCGGCACCCACCTGCAGACAC-GGCTTCAGCCGGCCCAAGCTCCTTCTGTTTCTTTCCCCAGCTTGCTTAGGTTTCATTCACAAACAGTAAAGCCCAT----------TCATGGgacagttgtatacagtcatgtaatatccaccacagtcaagatgtgt-aatatttcattctcctaacaagtgttc----tcatgcctgttcag--attccctcctccagctcccagccccaggcagacagtgatcggattcctgttcctgtgactttgcctttcctggaagcgcataga-----catggaagagtattctatctcttct-------atctcttccacttaacttgatgatttccagactctt-ccatgtcgtgtgggc-ttaatattttgttcattttttatcaatgggtagaatctcataatatacatgaaccacaggttatcagtttgcctgttgatgggcatttgggctgtttgcagtttggatgtgttacaaataatgctggtgagagtacttgtgtccacgtctttgtgtggacatatgctttcattttc-------------ctg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 77343 619 - 21531802 TGGTGGGCTCCTTGAGGGTTGCCTCAATCAT-CCCAGGCACCCATAGGAGACACCTGAGGTTTGGGGTTTGTGCCACGCAACTCTGGGG---CCTCCAGCACCCACCTGCAGACAT-GGCTTCAGCCGGCCCATGCTCCTTGTGTTTCTTTCCCCAGCTTGCTTAGGTTTCATTCACAAACAGTAAAGCCCAT----------TCATGGgacagttgtatacagtcatgtaacatccaccacagtcaagatgtgg-aatatttcattctcctaacaagtgttc----tcatgcctcttcag--attccctcctccagctcccagccccaggcagacagtgatctgattcctattcctgcgactttccctttcctgaaagctcataga-----catggaacggtattctagctcttct-------atctcttctgcttaacttgatgatttccagactctt-ccatgtcgtgtgggc-ttaatatttcgttcgttttttatcaatgggtagaatctcataatatgcatgaaccacaggttatcagtttgcctgttgatgggcatttgggctgtttgcagtttggatgtgttacaaataacgct-gtgagagtacttgtgtccacgtctttgtgtggacatatgctttcattttc-------------ctg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 102037 620 - 2515279 TGGTGGGCTCCTTGAGGGTTGCCTCAATCAT-CCCAGGCACCCATAGGAGACACCTGAGGTTTGGGGTTTGTGCCACGCAACTCTGGGG---CCTCCGGCACCCACCTGCAGACAT-GGCTTCAGCTGGCCCAAGCTCCTTCTGTTTCTTTCCCCAGCTTGCTTAGGTTTCATTCACAAACAGTAAAGCCCAT----------TCATGGgacagttgtatacagtcatgtaatatccaccacagtcaagatgtgt-aatatttcattctcctaacaagtgttc----tcatgcctcttcag--attccctcctccagctcccagccccaggcagacagtgatcggattcctgttcctgtgactttgcctttcctggaagcgcataga-----catggaagagtattctatctcttct-------atctcttccacttgacttgatgatttccagactctt-ccatgtcgtgtgggc-ttaatattttgttcattttttatcaatgggtagaatctcataatatacatgaaccacaggttatcagtttgcctgttgatgggcatttgggctgtttgcagtttggatgtgttacaaataatgctggtgagagtacttgtgtccacgtctttgtgtggatatatgctttcattttc-------------ctg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 258572 613 + 6586416 TGGTGGACTCCTTGAGGGTTGCCTTAATCGT-CCCAGGCACCTATAGGAGACACCTGAGGTTTGGGGTTTGTGCCACGTGGCTCTGGGG---CCTCCGGCACCCACCATCAGACAG-GGTTTCAGCCGGCCCATGCTCCTTCTGTTTCTTTCCCCAGCTTGCTTAGGTTTCATTCACAAACAGTAAAGCCCAG----------TCttgtgaccattg--tacagtcatgtaatatccaccacagtcaagatatgg-aatatttcattctcctaaaaagtgttc----tcacacctcttcag--attccctcctccagctcccagccccaggcagacagtgatctgattcctattcctgcaactttgcctttcctggaagctcataga-----catggaacagtattct--cttttct-------atctctgccacttaact---cgatttccagactcat-ccatgtcatgtgggc-ttaatattttgttcattctttattaatgggtagaatctcataatatgcacgaaccacaggttatcaacttgcctgttgatgggcatttgggctgtttgcagtttggatgtgttacaaataacgctggtgagaggacttgtgtccacgtctttgtgtggacatacgctttcattttc-------------ctg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146632642 596 - 204313951 TGGTGGGCTTCTTGAGGGTTGCCTTAATCATCCCCAGG-------------CACCTGCTGTTTGTGGGTTGTGCCACACAGCTCCGTGG---CCTCCAGCACCCACCTGCAGACAT-AGCTTCAG-TGGCCCATGCTCCTTCAGTTTCTTTCCCCAGCTGGTTTAGGTTTAATTCAAAAACAGTCAAACCCAT----------TCATGtgacagttgtatacagtcatgaaacatctaccacagtcaagatgtga-aacatttcattctcctgaaaagtgttctccttcctgccccttcag--attccctcctgcagctcccagccccaggtaggcagtgatctgattcctgtccctgtaacttcgcctttcctggaagctcataga-----catggaagagtgttcta----------------tctcttccacttaactcaatgatttcaagattcat-ccatgtcatgtgggc-ttaatattttgttcattttttattaatgggtactataccataatatggatgtatcataggttatcaacttgcctgttgatgggcatttgggct-cttgtggtttggctgtattacaaat---attggtgtaagcatttgtgtccacatctttgtgtggacat--gttttcattttc-------------tca i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 333064 600 - 2409723 TGGTGGGCTTCTTGA-GGTTGCCTCGATCATCCCCAGGCACCCACGGGAGACACCCACTGTTTGTGGGTTGTGCCACACAGCTCCATGG---CCTCCAGCACCCACCTGTAGACAT-GGCTTCAG-TGGCCCATGCTCCTTCAGTTTCTTTCCCCGGCTTGTTTAGGTTTGATTCACCAACAGTAAAGCCCAT----------TCATGtgacagttgtatacagtcatgaaacatctaccacagtcgaggtgtgg-aacatttcattctcctaaaaagtgttctccttcctgctccttcag--attccctcctgcagctcccagccccaggtagacagtgatctgattcctgtccctgtaactttgcctttcctggaagctcataga-----catggagtggtgttcta----------------tctcttccacttaactcaatgatttcaa------------gtcatgtgggc-ttaatattttgttcattttttattaatgggtagtatcccataatatggatggaccataggttatcaacttgcctgttgacgggcatttgggct-cttgcagtttggatgtattacaaatatcattggtgtggggacttgtgtccacatctttgtgtggatat--gttttcattttc-------------tca i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 468099 609 - 2125214 TGGTGGGCTTCTTGA-GGTTGCCTTAATCATCCCCAGGCACCCACGGGAGACACCTGCTCTTTGTGGGTTGTGCCACACAGCTCCAT-G---CGTCCAACACCCACCTGCAGGCAT-GGCTTCAG-TGGCCCATGCTCCTTCAGTTTCTTTCCGCAGCTTGTTTAGGTTTAATTCACCAACAGTAAAGCCCAT----------TCATGtgacagttgtatacagtcatgaaacatctaccacagtcaagatgtgg-aacatttcactctcctaaaaagcgttctccttcctgctccttcag--attccctcctgcagctcccagccccaggtagacagtgatctgattcctgtccctgtaacttcacctttcctggaagctcataga-----cacggaacagtgttcta----------------tctctt-cacttaactcaatgatttcaagattcat-ccatgtcatgtgggc-ttaatattttgttcattttttattaatgggtagtatcccataatatggatgtaccatggcttatcaacttgcctgttgatgggcatttgggct-cttgcggtttggatgtattataaatatcattggtgtgagcacttgtgtccacatctttgtgtggacat--gttttcattttc-------------tca i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2199997 644 - 8137123 TGGTGAGCTTCTTGAGGGCTGCCTTAGTAACCCTGAGGCACCCATGGGGGACACCTG-GGTTTGTTGCTTGGGTCATACAGCTCTGGGG---CCTCTTCCATCTACCTGCTGACTTAGGGTTCAGCCAGCCTGTAATTTTTCTGTTTTGTTCCCCATC----TTTGTTTtaattcacatgcaataaaattcacaattggtgagcaatttgccaattgtatacagtaaagtaacg---actttgcttgagatacag-aacatttcattaccctaaaaa-tcttc----tccagcctcttcaaatattccttcttctagttcctagtcccacacaggcaatcgtatggtttctgtc---atagctttgcctttcctgaaagttctcagaaagggtattgtagagtattccctgtattttgtatttagtttctttcacttaacac-atgatttcaagattcac-ccttgctgaggtggcgttaacattttgttc-ttttttattaatgagtattat--tatctcatgaatctatcacagtttatcagttttcctcttggtggacatttgagttgtttgtagtttagatttatcatgaataactttagcatcagcatttgtgtataggtctttgtgtggacatatgttttcattttctgttttttcttttctg i otoGar3.GL873611 I 123 I 256 e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=1164957.000000 s hg38.chr7_KI270899v1_alt 103921 154 + 190869 gggtaaatatttaggattggaattgctgggtcatgtggtaagtgaatgttttacctc-ttagatagtgtcagtccattttcca-aag-----tatttccatttaaaattccaaccaaattt-catgcattccaatttaaattgtatgtaaattcccattgtt s panTro5.chr7_NW_015973501v1_random 2086 154 - 19153 gggtaaatatttaggattggaattgctgggtcatgtggtaagtgaatgttttacctc-ttagacagtgtcagtccattttcca-aat-----tatttccatttaaaattccaaccaaattt-catgcattccaatttaaattgtatgtaaattcccattgtt i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 64765 154 - 432965 gggtaaatatttaggattggaattgctgggtcatgtggtaagtgaatgttttacctc-ttagatagtgtcagtccattttcca-aag-----tatttccatttacaattccaaccaaattt-catgcattccaatttaaatggtatgtaaattcccattgtt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 119751 154 + 85365473 gggtaaatatttaggattggaattgctgggtcatgtggtaagtgaatgttttacttc-tcagatagtgtcagtccattttccc-aag-----tatttccatttaaaattccaaccaaattt-catgcattccaatttaaattgtatgtaaattcccattgtt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33971337 155 + 185818997 gggtaaatatttagggttggaattgctgggtcttgtggtaagtgaatgttttacttc-tcagatagtgtcagtccattttccc-aag-----tatttccatttaaaattccagcgaaatttacatgttttccaaggtaaattgtatgtaaattcccattgtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33587675 155 + 192294377 gggtaaatatttagggttggaattgctgggtcttgtggtaagtgaatgttttacttc-tcagatagtgtcagtccattttccc-aag-----tatttccatttaaaattccagcgaaatttacatgttttccaaggtaaattgtatgtaaattcccattgtt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4349037 155 - 9440265 gggtaaatatttagggttggaattgctgggtcttgtggtaagcgaatgttttacttc-tcagatagtgtcagtccattttccc-aag-----tatttccatttaaaattccagctaaatttacatgttttccaaggtaaattgtatgtaaattcccattgtt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16941942 155 - 21915920 gggtaaatatttagggttggaattgctgggtcttgtggtaagtgaatgttttacttc-tcagatagtgtcagtccattttccc-aag-----tatttccatttaaaattccagctaaatttacatgttttccaaggtaaattgtatgtaaattcccattgtt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 77962 155 - 21531802 gggtaaatatttagggttggaattgctgggtcttgtggtaagtgaatgttttacttc-tcagacagtgtcagtcgatttcccc-aag-----tatttccatttaaaattccagctaaatttacatgctttccaaggtaaattgtatgtaaattcccattgtt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 102657 154 - 2515279 gggtaaatatttagggttggaattgctgggtcttgtggtaagtgaatgttttacttc-tcagatagtgtcagtccattttccc-aag-----tatttccatttaaaattccagc-aaatttacatgttttccaaggtaaattgtatgtaaattcccattgtt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 259185 155 + 6586416 gggtaaatatttagggttggaattgctgggtctcgtggtaagtgaatgttttacttc-tcagatagtgtcagtccatttcccc-aag-----tatttccatttaaaattccAGCTAAATTTACATGCTTTCCAAGGTAAATTGTATGTAAATTCCCATTGTT i colAng1.NW_012117710v1 C 0 I 3329 s calJac3.chr2 146633238 151 - 204313951 gggtaaataattaggattggaattgctgagtcacgtggta----gatgttttatttc-tcagatagtgtcagtccattttccc-aag-----tatttccatttaaatttccaacaaaatttacatacattcacatttaaattgtaagcaaattcccaatgtt i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 333664 148 - 2409723 gggtaaataattaggattggaattgctgagtcatgtggta----aatgttttacttc-tcagatagt----gtccattttccctaag-----tatttccatttaaatttccaacaaaatttacatatattcccatttaagttgtacataaattcccattgtt i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 468708 150 - 2125214 gggtaaataattagaattggaattgctgagtcatgtggta----aatgttttacttc-tcagatagtgtcagtccatttccc--aag-----tatttccatttaaatttccaacaaaatttacatacattcccatttaagttgtatgtaaattcccattgtt i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2200897 141 - 8137123 gggtaaatatttaggattgggattgctgaatcacatgataagtggatgttttattttatcatatagtgtcattctattttcca-aagtattatatttctattt-----------taaatttgcagaca---------gaaatgtatgcaagttcctgttgct i otoGar3.GL873611 I 256 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=1754831.000000 s hg38.chr7_KI270899v1_alt 104075 277 + 190869 ctatatccttgtcaacacttagtattgtcaatctttttaacttt-------------------------agactgcttttaatgtgt---actcctctgatggcaagtgacgttgatcattttttcatgtgcctatgggtcatatatct-tttttgtcatgtatttgtccaagtccttttcaatttttaactgcagttttcaaattattgatttataagatatcttcatatattctgagtacaagcccattgtcagatgtggattttgtaaaattattctgccagtttgtagtctgcttttgcatt s panTro5.chr7_NW_015973501v1_random 2240 277 - 19153 ctatatccttgtcaacacttagtattgtcaatctttttaacttt-------------------------agactgcttttaatgtgt---actcttctgatggcaagtgatgttgatcattttttcatgtgcctatgggtcatatatct-tttttatcatgtattcgtccaagtccttttcaatttttaactgcagttttcaaattattgatttataagatatcttcatatattctgagtacaagcccattgtcagatgtgaattttgtaaaattattctgccagtttgtagtctgcttttgcatt i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 64919 277 - 432965 ctatatccttgtcaacacttagtattgtcaatctttttaacttt-------------------------agactgcttttaatgtgt---actcctctgatggcaagtgatgttgatcattttttcatgtgcctatgggtcatatatct-tttttgtcatgtatttgtccaagtccttttcaatttttaactgcagttttcaaattattgatttataagatatcttcatatattctgagtacaagcccattgtcagatgtggattttgtaaaattattctgccagtttgtagtctgcttttgcatt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 119905 276 + 85365473 ctatatccttgtcaacacttagtattgtcgatctttttaacttt-------------------------agactggttttaatgtgt---acttctctgatggcaagtgatgttgatcattttttcatgtgcctatgggtcatatatct-tttttgtcatgtatttgtccaagtcttttgcaatttttaattgcagttttcaaattattgatttataagatatc-tcatatattctgagtacaagcccattgtcagaagtggattttgtaaaattattctgtgagtttgtagtctgcttttgcatt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33971492 276 + 185818997 ctatatccttgccaacacttagtattgccaatctttttaacttt-------------------------agaccagttttcgtgtgt---gcttctctgatggcaagtgatgctggtcattttgtcatgtgcctgtgggtcatatatct-tttttgtcctgcatgtgtccaagtcctttgcaatttttaattgcagttttcaaattattgatttataagatatcttcatatattctgagtacaagtgcattatcagatgtgtattttgt-aaattattctgccagtttgtagtccacttttgcatt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33587830 276 + 192294377 ctatatccttgccaacacttagtattgccaatctttttaacttt-------------------------agaccagttttcgtgtgt---gcttctctgatggcaagtgatgctggtcattttgtcatgtgcctgtgggtcatatatct-tttttgtcctgcatgtgtccaagtcctttgcaatttttaattgcagttttcaaattattgatttataagatatcttcgtatattctgagtacaagtgcattatcagatgtgtattttgt-aaattattctgccagtttgtagtccacttttgcatt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4349192 276 - 9440265 ctatatccttgccaacacttagtattgccaatctttttaacttt-------------------------agaccagttttcatgtgt---gcttctctgatggcaagtgatgctggtcattttgtcatgtgcctgtgggtcatatatct-tttttgtcctgcatgtgtccaagtcctttgcaatttttaattgcagttttcaaattattgatttataagatatcttcatatattctgagtacaagtgcattatcagatgtgtattttgt-aaattattctgccagtttgtagtccgcttttgcatt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16942097 276 - 21915920 ctatatccttgccaacacttagtattgccaatctttttaacttt-------------------------agaccggttttcgtgtgt---gcttctctgatggcaagtgatgttggtcattttgtcatgtgcctgtgggtcatatatct-tttttgtcctgcatgtgtccaagtcctttgcaatttttaattgcagttttcaaattattgatttataagatatcttcatatattctgagtacaagcgcattgtcagatgtgtattttgt-aaattattctgccagtttgtagtccgcttttgcatt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 78117 276 - 21531802 ctatatccttgccaacacttagtattgccaatctttttaacttt-------------------------agacttgttttcatgtgt---gcttctctgatggcaagtgatgctggtcattttttcatgtgcctgtgggtcacatatct-tttttgtcctgcatgtgtccaagtcctttgcaatttttaattgcggttttcaaattattgatttataagatatcttcatatattctgagtacaagcgcattgtcagatgtgtattttgt-aaattattctgccagtttgtagttagcttttgcatt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 102811 276 - 2515279 ctatatccttgccaacacttagtattgccaatctttttaacttt-------------------------agaccggttttcatgtgt---gcttctctgatggcaagtgatgctggtcattttgtcatgtgcctgtgggtcatatatct-tttttgtcctgcatgtgtccaagtcctttgcaatttttaattgcagttttcaaattattgatttataagatatcttcatatattctgagtacaagcgcattgtcagatgtgtattttgt-aaattattctgccagtttgtagtccacttttgcatt i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chr2 146633389 262 - 204313951 ctgtatccttgtcaacacctaatattgtcaatcttgttaatttt-------------------------agcctagttttaatgtgt---acttctctgatggcaagtgatgttgatcattttttcatgtgcc------------atc--tttttgtcatgtattcgttcaagtcctttgccatttttgaatgca-tcttcaaagtattgatttataagatatctttacatattctgagtagaag-ccattgtcatttatgcattttgtaaaattattctactagtctgtagcctgcttttgcatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 333812 265 - 2409723 ct-tatccctgtcaacacttagtattgtcaatcctgttaaattt-------------------------agactgctttaaacgtgtaccacctctctgatggaaaatgatgttgatcattttttcatatgcc------------atc--tttttgttatgtatttgtttaagtcctttgccatttttcattgca-ttttcaaagtactgatttataagatatcttcacatattctgagtacaagcccattgtcagatatgcattttgtaaaattattcctccagtccgtagtctgcttttgcatt i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 468858 263 - 2125214 ctgtatccctgtcaacacttagtattgtcagtcttgttaacttt-------------------------agactgatttaaatgtgt---acctctctgatggcaagtgatgttgatcgtttcctcatatgcc------------atc--tttttgttatgtattttttcaagtccgttgtcatttttgatcaca-ttttcaaagtactgatttatacgatatcttcacatattctgagtacaggcccattgtcagatatgcattttgtaaaattattctgccagtctgtagtctgcttttgcatt i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2201038 290 - 8137123 ctgtttccttgccaacacttagtattgtccatcttttgaactttaaacattcaaaagtggtgtgtaataagactggttttaatatgc---atggttctgatgagtcaggatgttgatcatttttt-atgtgcttattggtcatttatatatctttgcaatttacatgttcaagtgctttg------------gtcatttttgaattattgatttagaagagatctttatatattctggatataagccctttgtcagatgtatattttgcagaattattctgccaatctgtagtttacttttgcatt i otoGar3.GL873611 C 0 I 2988 e colAng1.NW_012117710v1 259340 3329 + 6586416 I e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=3442662.000000 s hg38.chr7_KI270899v1_alt 104352 577 + 190869 cccttaactctg----tttaattttgagc-aaccttttcaattttgctgaatttgttttatcattttttatcatctgtgc-tttcacatcttgtttctaaaaaatgtttattctagcccaagtcataaaaattcttctgtatgttttcttctagaactttaaaagttctaata---attttcagtccatgatccatctcaagataattttgcatgtggtgggaggtaaggcttgaaggtt---a-ttttgtttttccatgtagatatcaacttatcctggcaccatttattgaaacagctagttctgaaagaattaaatttttacctttaccagcaatcaaggga--ctatataaatgtgggtct-ttctgacttccccttcggctcagttggcctctgtgtc-tttcctgatgccaaaaccacactgtcgtgattaccatacctgtatagtaatttttgaaatcaagtagcgtgggccccacaaccttgttcttatttttcaaagttgtttctggatattttaacccttttgtctttccatgtaaatcttagcatcagctgtctcatttcttcaaaaggaccATAAGTGGCAC s panTro5.chr7_NW_015973501v1_random 2517 576 - 19153 cccttaactctg----tttaattttgagc-aaccttttcaattttgctgaatttgttttatcattttttatcatctgtgc-tttcacatcttgtttctaaaaaatgtttattctagcccaagtcataaaaattcttctgtatgttttcttctagaactttaaaa-ttctaata---attttcagtccatgatccatctcaagataattttgcatgtggtgggaggtaaggcttgaaggtt---a-ttttgtttttccatatagatatcaacttattctggcaccatttattgaaacagctagttctgaaagaattaaatttttaccttcaccagcaatcaaagga--ctatataaatgtgggtct-ttctgacttccccttcagctcaattggcctctgtgtc-tttcctgatgccaaaaccacactgtcgtgattaccatacctgtatagtaatttttgaaatcaagtagcgtgggccccacaaccttgttcttatttttcaaagttgtttctggatattttaacccttttgtctttccatgtaaatcttagcatcagctgtctcatttcttcaaaaggaccATAAGTGGCAC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 65196 573 - 432965 -ccttaactctg----tttaattttgagc-aaccttttcaattttgctgaatttgttttatcattttttatcatctgtgc-tttcacatcttgtttct-aaaaatgtttattccagccgaagtcataaaaattc-tccgtatgttttcttctagaactttaaaagttctaata---attttcagtccatgatccatctcaagataattttgcatgtggtgggaggtaaggcttgaaggtt---a-ttttgtttttccatatagatatcaacttattctggca-catttattgaaacagctagttctgaaggaattaaatttatacctttaccagcaatcaaggga--ctatataaatgtgggtct-ttctgacttccccttcggctcaatcggcctctatgtcttttcctgatgccaaaaccacactgtcgtgattaccatacctgtatagtaatttttgaaatcaagtagcgtgggcccca-aaacttgttcttatttttcaaagttgtttctggatattttaacccttttgtttttccatgtaaatcttagcatcagctgtctcatttcttcaaaaggaccATAAGTGGCAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 120181 570 + 85365473 cccttaactctg----tttaattttgagcaaaccttttccattttgctgaatttgcttcctcattttttatcatctgtgc-tttcatatcttgtttctaaaaaatgtttattctagctcaagtcataaaaattcttccctatgttttcttctagaatttcaaaagtcttagca-------------catgatccatctcaaggtaattttgcatgtggtgggaggtaaggcttgaaggtc---a-ttttgtttttccatgtagatatcaacttgttctggcaccatttatagaaacagctagttctgaaggaattaaatttatacctttaccagcaatcaagggactctatataaatgtgggtct-ttttgacttccccttcggctcaattggcctctatgtc-tttcctgatgccaaaaccacactgtcgtgattaccatacctgtatagtaatttttgaagtcaagtagtgtgggccccacaagcttgttcttatttttcaaagttgtttctggatattttaagcctgttgtctttccacgtaaatcgtagcatcagctgtctcatttcttcaaaaggaccataagtggcat i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 33971768 582 + 185818997 tccttaactctgtatttttaattttgagaaaaccttttcaattttgctgaatttactttatcattttt-atcatctgtgcttttcacatcttgttcctaaaaaatgtttattctagcccaagtcataaaaatccttccctatgttttcttctagaactttaaaagtcttagcactaattttcagtccatgatccatctcaagataattttgcatatggtgggaggtaaggcctgaaggtc---a-tt---ttgtttcatgtagatatcaacttgttctagcaccatttattgaagcagctagttctgaaggaattaaatttatacctttaccagcaatcaaagga--ctatataaatgtgggtct-ttctgacttccccttcagctcagttggcctctgcatc-ttccctgatgctgaaaccacacggtcgtgattaccatacctgcagaggaatttttgaaatcaggtagtgtgggccccacagccttgttcttatttttcaaagttgtttctggatattttaagcattttgtctttccacataaatcttagcatcagctgtctcatctattcaaaaggaccataagtggcac i rheMac8.chr3 C 0 I 289 s macFas5.chr3 33588106 581 + 192294377 tccttaactctgtatttttaattttgagaaaaccttttcaattttgctgaatttactttatcattttt-atcatctgtgcttttcacatcttgttcctaaaaaatgtttattctagcccaagtcataaaaatccttccctatgttttcttctagaactttaaaagtcttagcactaattttcagtccatgatccatctcaagataattttgcatatggtgggaggtaaggcctgaaggtc---a--t---ttttttcatgtagatatcaacttgttctagcaccatttattgaagcagctagttctgaaggaattaaatttatacctttaccagcaatcaaagga--ctatataaatgtgggtct-ttctgacttccccttcagctcagttggcctctgcatc-ttccctgatgctgaaaccacacggtcgtgattaccatacctgcagaggaatttttgaaatcaggtagtgtgggccccacagccttgttcttatttttcaaagttgtttctggatattttaagcattttgtctttccacataaatcttagcatcagctgtctcatctattcaaaaggaccATAAGTGGCAC i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4349468 582 - 9440265 tccttaactctgtatttttaattttgagaaaaccttttcaattttgctgaatttactttatcattttt-atcatctgtgcttttcacatcttgttcctaaaaaatgtttattctagcccaagtcataaaaatccttccctatgttttcttctagaactttaaaagtcttagcactaattttcagtccatgatccatctcaagataattttgcatatggtgggaggtaaggcctgaaggtc---a-tt---ttttttcatgtagatatcaacttgttctagcaccatttattgaagcagctagttctgaaggaattaaatttatacctttaccagcaatcaaagga--ctatataaatgtgggtct-ttctgacttccccttcagctcagttggcctctgcatc-ttccctgatgctgaaaccacacggtcgtgattaccatacctgcagaggaatttttgaaatcaggtagtgtgggccccacagccttgttcttatttttcaaagttgtttctggatattttaagcattttgtctttccacataaatcttagcatcagctgtctcatctattcaaaaggaccataagtggcac i macNem1.NW_012019910v1 C 0 I 292 s cerAty1.NW_012002954v1 16942373 581 - 21915920 tccttaactctgtatttttaattttgagaaaaccttttcaattttgctgaatttactttatcattttt-atcatctgtgcttttcacatcttgtgtctaaaaaatgtttattctag-ccaagtcataaaaatccttccctgtgttttcttctagaactttaaaagtcttagcactaattttcagtccatgatccatctcaagataattttgcatatggtgggaggtaaggcctgaaggtc---a-tt---ttttttcatgtagatatcaacttgttctagcaccgtttattgaagcagctagttctgaaggaattaaatgtatacctttaccagcaatcaaggga--ctatataaatgtgggtct-ttctgacttccccttcagctcagttggcctctgagtc-ttccctgatgctgaaaccacacggtcgtgattaccatacctgcagaggaatttttgaaatcaggtagtgtgggccccacagccttgttcttatttttcaaagttgtttctggatattttaagcattttgtctttccacataaatcttagcatcagctgtctcatctattcaaaaggaccataagtggcac i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 78393 584 - 21531802 tccttaactctgtatttttaattttgagaaaaccttttcaattttgctgaatttactttatcatttttcatcatctgtgcttttcacatcttgtttctaaaaaatgtttattctagcctaagtcataaaaatccttccctatgttttcttctagaattttaaaagtcttagcactaattttcagtccatgatccatctcaaggtaattttgcatgtggtgggaggtaaggcctgaaggtc---attt---ttttttcacatagatatcaacttgttctagcaccgtttattgaagcagctagttctgaaggaattaaatttatacctttaccagcaatcaaggga--ctatataaatgtgggtct-ttttgacttctccttcagctcagttggcctctgagtc-ttccctgatgccgaaaccacacggtcgtgattaccatacctgcagaggaatttttgaaatcaggtagtgtgggccccacagccttgttcttatttttcaaagttgcttctggatattttaagcattttgtctttccacataaatcttagcatcagctGTCTCATTTATTCTAAAGGACCATAAGTGGCAC i chlSab2.chr28 C 0 I 3914 s manLeu1.NW_012101810v1 103087 581 - 2515279 tccttaactctgtatttttaattttgagaaaaccttttcaattttgctgaatttactttatcattttt-atcatctgtgcttttcacatcttgtttctaaaaaatgtttattctagcccaagtcataaaaatccttccctgtgttttcttctagaactttaaaagtcttagcactaattttcagtccatgatcca-ctcaagataattttgcatatggtgggaggtaaggcctgaaggtc---a-tt---ttttttcatgtagatatcaacttgttctagcaccgtttattgaagcagctagttctgaaggaattaaatttatacctttaccagcaatcaaggga--ctacataaatgtgggtct-ttctgacttccccttcagctcagttggcctctgagtc-ttccctgatgctgaaaccacacggtcgtgattaccatacctgcagaggaatttttaaaatcaggtagtgtgggccccacagccttgttcttatttttcaaagttgtttctggatattttaagcattttgtctttccacataaatcttagcatcagctgtctcatctattcaaaaggaccataagtggcac i manLeu1.NW_012101810v1 C 0 I 1 s calJac3.chr2 146633651 581 - 204313951 tccttaactctgtgtttttaattttgagaaaacattttcaattttgcagaattcactttatca-tttt--ttatctgtgcttttcacatc--atttctaaaaaatgtttattctagcccaagtcataaaaattcttccctatgttttattctagaactttaaaagtcttaacactaattttcagtccataatccatcttaagataattttgtatgtgaggggaggtaaagtttgaaggta-att-tt---tttttccatgtagatatcaacttgtgctagaaccagttattgaaaaaactagttgtaaaaaaattaagtttatacctttgccaacaatcaagtga--ctatgtaagtgtggatatttttggacttccccttcagctcaattgatctctatctc-cttcctgatgtgaaaaccacattgccgtgattactatagctatagagtgatttctgaaatcaaatagtgtgggccccacaacctacttattatttttcaaagttgtttctggctattttaagccttttgtctttccacataaatcttagcaccagctgtcccatttcttcaaaaggaccATGAATGTCAC i calJac3.chr2 C 0 I 1 s saiBol1.JH378296 334077 583 - 2409723 ttcttaactctgtgtttttaattttgagcaaactttttcaattttgctgaattcactttttcattttt--ttatctgtgcttttcacatcttgtttctaaaaaatgtttattctagcccaagtcataaaaagtcttccctatgttttattctagaactttaaaagtcttagcaccaactttcagtccatgatccatctcaagataattttgcatgtgagggaaggtaaggcttgaaagtatttt-tt---tttttccatgtggatatcaacttgtgctagcaccatttattgaaaaagttcgttctgaaagaattaagtttatacctttacgaacaatcaagtga--ctatataaatgtgggtctcttttgatgtccccttcagctcaattggtctctgtctc-tttcctgatgcaaaaaccacactgtcatgatgactatacctgtagagggatttttgaaatcaggtagtgtgggccccacaacctagttcttatttttcaaagttgtttctggcttttttaagccttttatctttccacataaatcttagcatccgctgtcccatttcttcaaaaggaccatga--gtcac i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 469121 580 - 2125214 ttcttaactctgtgtttttaattttgagcaaactttttcaattttgccgaattcactttttcattttt--ttatctgtgcttttcacatcttgtttctaaaaaatgtttattctagcccaagtcataaaaattcttccc--tgttttattctagaactttaaaagtcttagcaccaattttcagtccacgatccatctcaagacaattttgcatgtgaggggaggtaaggcttgaaagta---t-tt---tttttccttgtcgatatcaacttgtgctagcagcatttattgaaaaagttagttctgaaagaattaagtttataactttatgaacaatcaagtgg--ctatataaatgtgggtctcttttgacgtccccttcagctcaattggtctctgtctc-tttcctgataccaaaaccacactgttgtgattactatacctgtagagcgatttttgagatgaagtagtgtgggccccacagcctagttcttatttttcaaagttgtttctggctattttaagccttttgttttttcacataaatcctagcatcagctgtcccatttcttcaaaaggaccatgagtgtcac i cebCap1.NW_016107703v1 C 0 I 1 e colAng1.NW_012117710v1 259340 3329 + 6586416 I e otoGar3.GL873611 2201328 2988 - 8137123 I e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=55328.000000 s hg38.chr7_KI270899v1_alt 104929 20 + 190869 GGTAGTAT-ATTGATGAGCAA s panTro5.chr7_NW_015973501v1_random 3093 20 - 19153 AGTAGTAT-ATTGATGAGCAA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 65769 21 - 432965 GGTAGTATGACTGATGAGCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 120752 20 + 85365473 ggtagtac-actgatgagcaa i nomLeu3.chr20 I 1 C 0 s macFas5.chr3 33588688 13 + 192294377 GGTA--------GGTGAGCAA i macFas5.chr3 I 1 C 0 s cerAty1.NW_012002954v1 16942955 20 - 21915920 ggtaggat-actggtgagcaa i cerAty1.NW_012002954v1 I 1 C 0 s manLeu1.NW_012101810v1 103669 20 - 2515279 ggtaggat-actggtgagcaa i manLeu1.NW_012101810v1 I 1 C 0 s calJac3.chr2 146634233 20 - 204313951 AATAGTAT-ACTGGTGAGCAA i calJac3.chr2 I 1 C 0 s saiBol1.JH378296 334661 20 - 2409723 ggtagtat-actggtgagcaa i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 469702 20 - 2125214 ggtagtat-actggtgagcaa i cebCap1.NW_016107703v1 I 1 C 0 e colAng1.NW_012117710v1 259340 3329 + 6586416 I e otoGar3.GL873611 2201328 2988 - 8137123 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 78977 3914 - 21531802 I e macNem1.NW_012019910v1 4350050 292 - 9440265 I e rheMac8.chr3 33972350 289 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=6006.000000 s hg38.chr7_KI270899v1_alt 104949 1 + 190869 a s panTro5.chr7_NW_015973501v1_random 3113 1 - 19153 A i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 65790 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 120772 1 + 85365473 a i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33972639 1 + 185818997 a i rheMac8.chr3 I 289 C 0 s macFas5.chr3 33588701 1 + 192294377 A i macFas5.chr3 C 0 I 275 s macNem1.NW_012019910v1 4350342 1 - 9440265 a i macNem1.NW_012019910v1 I 292 C 0 s cerAty1.NW_012002954v1 16942975 1 - 21915920 a i cerAty1.NW_012002954v1 C 0 I 270 s manLeu1.NW_012101810v1 103689 1 - 2515279 a i manLeu1.NW_012101810v1 C 0 I 243 s calJac3.chr2 146634253 1 - 204313951 A i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 334681 1 - 2409723 a i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 469722 1 - 2125214 a i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 259340 3329 + 6586416 I e otoGar3.GL873611 2201328 2988 - 8137123 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 78977 3914 - 21531802 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=6600.000000 s hg38.chr7_KI270899v1_alt 104950 1 + 190869 g s panTro5.chr7_NW_015973501v1_random 3114 1 - 19153 G i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 65791 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 120773 1 + 85365473 g i nomLeu3.chr20 C 0 I 4505 s rheMac8.chr3 33972640 1 + 185818997 g i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33588977 1 + 192294377 g i macFas5.chr3 I 275 C 0 s macNem1.NW_012019910v1 4350343 1 - 9440265 g i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16943246 1 - 21915920 g i cerAty1.NW_012002954v1 I 270 C 0 s manLeu1.NW_012101810v1 103933 1 - 2515279 g i manLeu1.NW_012101810v1 I 243 C 0 s calJac3.chr2 146634254 1 - 204313951 G i calJac3.chr2 C 0 I 15820 s saiBol1.JH378296 334682 1 - 2409723 g i saiBol1.JH378296 C 0 I 3636 s cebCap1.NW_016107703v1 469723 1 - 2125214 g i cebCap1.NW_016107703v1 C 0 I 3375 e colAng1.NW_012117710v1 259340 3329 + 6586416 I e otoGar3.GL873611 2201328 2988 - 8137123 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 78977 3914 - 21531802 I e aotNan1.NW_018514293v1 67380 100 + 376347 I a score=5854859.000000 s hg38.chr7_KI270899v1_alt 104951 2596 + 190869 acatacaatcgatttttctatgaaagttaaatgctgcaacttggctaaactaattttatttgtactaatagtttGGtttttatggtggtaaaattcacatattataaaattcactattttcacaattttgaagtgcacaattcagtggcatccagtgcgttcaccacgttgtcggc-----------------cccaggacattcgcatcaccaagaaaggagacaccacatcaatcgaggt-gtcactctctgttcctcccttcccccagctcctgtcaccactaacctgc-gttctgcctctttagatctgcccatttcgtataactggaatcatataacatgcggccctttgtgtccgtcttctttcactcatcatgttttcagtttcaaggttcatccatattgtggcatgttagggcttcattcctgtttgtggttg----------------aTGAGTAGACCACGCTTTCTCAGTGCCTATGCtagttgtttgtaagtttcttaagatacttcctcatacatgattcatgatatctgcataaagaggcagttc-ttcttctccctttccagtgtttatgctttAACTTTAATGTCAtttaaagctacctgtgtctctgttcttcaagtgcaattttggaagacagcatgtgtgtgggtcttgttttcatatctattctgacaacctctgcgttttacctgaaatctttggtccactcatatttaaataagtattgacatggttatgtctgggtctgtaattttatgcctcgctctc--tatacataccctccagttcccccctttgtttctcatttcttaac-tttttttagggttacgtgaatatttactgattgatttttctcctCATTATATTTTGTGAATATACGTGAATATTTATTGATTGATCTTTCTCCTTATTAAGCTTTTtcagcatggtatcacctcagtagtagagcataatcagtcctagactaatttaggccccacccaaaaaagcttaaaatcaagcctcaaatatatcaaattgtttccaagtaaagtaacttcatccctgaaaagttt-taaaataattttaggagtgcaaaactatccaggatctaacaaggaaaagtacatgatgtctagcatacagtaaaaaatcaccaagtatgcaaagaggcaggaaaacacatcatgtaat---gaggaatatcaacaaattgaaactaattcacaaatggcacagatgagggcattcctagacacagatgaactgtagttattatcactctattccacatgataacgttaagcagagatatgaaaaacattaaaaagtcccaattctaacttttagagatgaaaccatttctgagataaagaaaattcactggatgagatgatgagattagacagacactacaaaaggaaagattaatgaacttaaaggtatataatagaaaccatccaaagtgaaacacagacagaaaatagaccccttcaaaaggagcagaaagctaattggggggcaacttcaattggcctaaaattcatacatttagagtcccagaaagaaaacaaagaaaaaaaaaca-gaaaaaaaaggaggacataatgactgaaatcttttgaaatttgctttttaaaagctacatatcccagtccaaaaagtatgaagtacgaagaaggcacatcttaaccaaactgcttaaactgggtaagaacgagacaatcttaacagcaggcagaagaaaagagacgtgctgggtacagaggaacaaagacaaggatgacgacaggtttctccttgaaaatgaggcgagc-tagaggacagtggaacaagctctgcaaagtactgccgggaaaagcctgttgatttgtgattctgtacctggcaacaaaggtagaaacagggtgagatatcaag-tttttcagacatataaaagctaaaatattaatcataccag-cagataagcactaagagatattaaagaaagtcctttggacaagaggaaaatgacattataggagacccgatagaagcacaggaaggaaaagcatgttttgctgggtatagaacatgtagagaaataaaatatgtgcccacaaggacatgaaggagggcagggaatggaagtgtgctg--ctgtaaggttattaaaccatcatgatgtagtgtaatattatttgaagataga-ttatgataagttgaaggtgcacactataaaccctaaaatgtatacacacacacgcacacatacatatgtacagacagagttatggggaataagccaaca-gaagtgattaaatgggatgattaaaaaatacccagtccagaagaaggctggctaagagg-aacaggaaac-aaaaagtagacaggataaataaaatgcaaatagcaagatggtggtttaagtccaaccattatcaa-cagtgatggtagatgaaaatgatctataaccattggtctaattcagtggcagtttgtcagacttaataacaaagcaagacccaactaa-ttgctgcctacccaaaacccac-tttaaatata-aattcacaaatacatg-aaaactaatgggattttaaaagatacactgtactaacactagtcaaaaaaaaaaaaagcgggaacagctatattaatattgaa-----------------caa s panTro5.chr7_NW_015973501v1_random 3115 2566 - 19153 ACATACAATCGATTTTTCTATGAAAGTTAAATGCTGCAACTTGGCTAAACTAATTTTATTTGTACTAATAGTTTGGtttttatggtggtaaaattcacatatcataaaattcattattttcacaattttgaagtgcacaattcagtggcatccagtgcgttcaccacattgtcggc-----------------tccaggacattcgcattaccacgaaaggagacaccacatcaatcaaggt-gtcactctctgttcctcccttcccccagctcctggcaccactaatccgt-gttctgcctctttagatctgcccatttcgtataactggaatcacataacatgcggccctttgtgtccgtcttctttcactcatcatgttttcaatttcaaggttcatccatattgtggcatgttagggcttcattcctgtttgtggttg----------------aTGAGTAGACCACACTTTCTCAGTGCCTATGCtagttgtttgtaagtttcttaagatacttcctcatacatgattcatgatatctgcataaagaggcagttcgttcttctccttttccaatgtttatgctttAACTTTAATGTCAtttaaagctacctgtgtctctgttcttcaagtgcaattttggaagacagcatgtgtgtgggtcttgttttcatatctattctgacaacctctgcattttacctgaaatctttggtccactcgtatttaaataagtattgacatggttatgtttgggtctgtaattttatgccttgctctc--tatacatatcctccagtt-tcccctttgtttctcatttcttaacttttttttagggttatgtgaatatttagtgattgatttttctcctcattatattttgtgaatatacgtgaatatttattgattgattttTCTCCTTATTAAGCTTTTtcagcatggtatcacctcagtagtagagcataatcagtcctagactaatttaggccccacccaaaaaagcttaaaatcaagcctcaaatatatcaaattgtttccaagtaaagtaacttcatccctgaaaagttt-taaaataattttaggagtgcaaaactatccaggatctaacaaggaaaagtacatgatgtctagcatacagtaaaaaatcaccaagtatgcaaagaggcaggaaaacacatcatgtcat---gaggaatatcaacaaattgaaactaattcacaaatggcacagatgagggcattcctagacacagatgaactgtagttattatcactctattccacatgataacgttaagtagagatatgaaagacattaaaaagtctgaattctaacttttagagatgaaaccatttctgagataaagaaaattcactggatgagatgatgagattagacagacactacaaaaggaaagattaatgaacttaaaggtatataatagaaaccatccaaagtgaaacacagacagaaaatagaccccttcaaaaggagcagaaagctaattggggggcaacttcaattggcctaaaattcatacatttagagtcccagaaagaaaacaaagaaaaaaaaaca-gaaaaaaaaggaagacataatgactgaaatcttttgaaatttgctttttaaaagctacatatcccagtccaaaaagtatgaagtacgaagaaggcacatcttaa-caaactgcttaaactggg-aagaacgag-caatctt-acagcaggcagaagaaaagagacgtgctgggtacaga-gaacaaagacaaggatgac-acaggtttctccttgaaaatgag--gagcttagaggacagtag-acaagctctgc-aagtactgcc-ggaaaagcctgttgatt--tgattc-gtacctggcaacaaaggtagaaaca-ggtgagatatcaagttttttcagacatataaaagataaaatattaatcataccagacagataa-cactaagagatattaaagaaag---tttggacaaga-gaaaatgacattataggaga-ccgatagaagcacaggaaggaaaagcaTG-TTtgc--ggtatagaacatgtagagaaataaaatatgtgcccacaaggacatgaaggagggcagggaatgg-agtgt-ctgccctgtaa-gtta-taaaccatcatgatgtagtgtaatattatttgaagatagatttatg-taagttgaaggtgcacactataaacc--aaaatgtatacacacacacgcacacatacatatgtacaaacagagttatggggaataagtcaacaggaagtgattaaatgggat-at--aaaaatacccagtccagaagaaggttggctaagaggcaacaggaaacaaaaaagtagacaggataaataaaacgcaaatagcaagat--tggtgtaagtccaaccattatcaaccagtgatggtagatgaaaatgatctataaccattggtctaattcagtggcagttc-tcagacttaataataaagcaagacccaactaatttgct-ccta-ccaaaacccacttttaaatatataattcaaaaatacatg-aaaacaattggcattttaaaagatacactgta-taa-actagtc--aaaaaaaaaaggggggaacagctata-taatattgaa-----------------caa i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 65792 2561 - 432965 ACATACAATCGATTTTTCTATGAAAGTTAAATGCTGCAACTTGG-TAAACTAATTTTATTTGAACTAATAGTTTGGtttttatggtggtaaaattcacatattataaaattcactattttcacaattttgaagtgcacaattcagtggcatctagtgcgttcaccatgttgccggc-----------------tccaagacattcgcatcaccacgaaaggagacaccacagcaatcaaggt-gtcactctctgttcctcccttcccccagctcctggcaccactaatctgcagctctgcctctttagatctgcccatttcgtataactggaatcatgtaacatgcgg-cctttgtgtccg---------------------------------------------------atgttagggcttcattcctgtttgtggttgagtagtattccatcatatgagtagaccacaccttCTCAGTGCCTATGCtagttgtctgtaactttcttaagatacttcctcatacatgattcatgatatctgcataaagaggcagttc-ttcttctccctttccaatgtttatgctttAACTTTAATGTCATTTAAAGCTACC-GTgtctctgttcttcaagtgcaattttggaagacagcatgtgtgtgggtcttgttttcatatccattctgacaacctctgcgttttacctgaactctttggtccactcgtatttaagtaagtattgacatggttgtgtttggctctgtaattttatgcctcgctctc--tatacatatcctccagtt-tcccctttgtttctcatttcttaacttttttttagggttatgtgaatatttagtgattgatttttctcctcgttatattttgtgaatatacgtgaatatttattgattgattttTCTCCTTATTAAGCTTTTtcagcacggtatcacctcagtagtagagcataatcagtcctagactaatttaggccccacccaaaaaagcttaaaatcaagcctcaaatatatcaaattgtttccaagtaaagtaacttcatcccagaaaagtttaaaaaataattttaggagtgcaaaactatccaggatctaacaaggaaaagtacatgatgtctagcatacagtaaaaaatcaccaagtatgcaaagaggcaggaaaacacatcatgtaat---gaggaatatcaacaaattgaaactaattcacaaatggcacagatgagggcattcctagacacagatgaactgtagttattatcactctattccacatgataacg-taagtagacatatgaaagacattaaaaagtcccaattctaacttttagagatgaaacaatttctgagataaagaaaattcactggatgagatgatgagattagacagacactacaaaaggaaagattaatgaacttaaaggtatataatagaaaccatccaaagtgaaacacagacagaaaatagaccccttcaaaaggagcaaag---taattggggggcaacttcaattggcct-aaattcatacttttagagtcccacaaagaaaacaaagaaaaaaaca----gaaaaaaaggaagacataatga-tgaaatcttttgaaatttgctttttaaaagctacatatcccagtccaaaaagtatgaagtacgaagaaggcacatcttaaccaaactgcttaaactgggtaagaacgagacaattta-acagcaggcagaagaaaagagacgtgctgggtacagaggaacaaagacaaggatgacgacaggtttctccttgaaaatgaggcgagc-tggaggacagtggaacaagctctgcaaagtactgccgggaaaagcctgttgatttgtgattctgtacctggcaacaaaggtagaaacagggtgagatatcaag--ttttcagacatataaaagctaaaatattaatcataccag-cagataagcactaagagatattaaagaaagtcctttggacaagaggaaaatgacattataggagacccaatagaagcacaggaaggaaaagcatgttttgctgggtatagaacatgtagagaaataaaatatgtg-ccacaaggacatgaagga-ggcagggaatggaagtgtgctg--ctgtaaggttattaaaccatcatgatgtagtgtaatattatttgaagataga-ttatgataagttgaaggtgcacactataaaccc-taaatgtatacacgcacacgcacacatacatacgtacaaacagagttatggggaataagccaaca-gaagtgattaaatgggatgattaaaaaatacccagtccagaagaaggttggctaagagg-aacaggaaac-aaaaagtagacaggataaataaaacacaaatagcaagatggtggtttaagtccaaccattatcaa-cagtgatggtagatgaaaatgatctataaccattggtccaattcagcggcagtttgtcagactgaataataaagcaagacccaactaa-ttgctgcctacccaaaacccac-tttaaatacg-aattcacaaatacatgaaaaactaatgggattttaaaagatacactgtactaacactagtc---aaaaaaaaaagcgggaacagctatagtaatattgaacaaggtggatttcagagcaa i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33972641 2623 + 185818997 acatacaatcgatttttctatggaagttaaatcctgcaacttggctaaagtaa-tttatttgtactaatagtttGGTTTCTGTGGTggtaaaattcacgtattataaaattcactattttcacaatttggaagtgcacaattcagtggcatctagttcgttcacaatgttgtcggccgtaaccactgtcttgttctgggccattggcatcaccatgaaaggagacaccacatcaatcaagggaggaactctctctttctcccttcccctggctcctggcaccactaatctgc-gttctgcctctttagatttgcccatttcatagacctggaatcatataacctgtggccctttctgtcagtcttctttcactcatcatgttttcgatttcaaggttcatccatattgtggcatgttagtgcttcattcctgttcactgctgagtaatattccatcatgtgagtcgaccacactttCTCAGTGCCTATGCTAAttgtttgtaggtttcttaagatatttcctcatacgtgattcatgatatctgcataaagaggcagttc-ttcttcttcctttcccatgtttatgttttAATTGTAAttttatttaaagttacctgtgtctctgtctttaaagtgcagttttggaagatagcatgtgtgtgggtcttattttcatatctattctgacaacttccaccttttagctgaaatctttggtccactaatatttaaataagtattgacatggttatgtttgggtctgtaattttatgccttgttctctatatacatatcctccagttttcccctttgttcttcatttc------ttgttttaggattatgtgaatatttg--gatggatttttctcctcattatggtttgtgaatACGTGTGAATACTTATTGATTGATTTTTCTCTTTATTCAGCTTTAtcagcatggtgtcagcccagtagtggagcataatcagtccgagactaatttaggccccacccgataaagcttaaaatcaagcctcaaatgtatcaaattgtttccaagtaaaggaacttcatcccataaaagttt-taaaataattttaggagtgcaaaactatccaggatctaacaaggaaaagtacgtgatgtctagcatacagtaaaaaattaccaagtatgcaaagaggcaggaaaacatatcatgtcatgaggaggaatatcaacaactgaaaactgactcacaaatggcacagatgcaggaattcatagataaagatggactgtagttattatcactctgctccacatgataatgttaagtagagatatgaaagacattaaaaagccccaagtcaaacttttagagatgaaaccatttttgagataaaggaaattcactggatgagattatgagattagagagacactacaaaaggaaagatcaatgaacttgaaggtgtgtaatagaaaccatccaaagtgaaacacagacagaaaacagaccccttcgaaagcagcaggaagctagttgggaggcaacttcaattggcctaaaattcatacatttagagtcccagaaagaaaacaaagaagaaaaaaag-agaaaaaaaggaagataaaatgatcgaaatcttttcaaatttgtttttttaaagctacatctcccaatccaaaaagtacgaagtatgaagaaggcacatcttaatcaaattgcttaaattgggtgagaatgagacaatcttaacagcaggcagaagacaagagacatgctaggtacagaggaacaaagacaaggatgatggcaggtttctccttgaaaatgaggcgagc-tagaggacagtggaacaagctctgcaaagtcctgccgggagaagcttgttgattcatgattccatacctggcaacaaaggtagaaacagggtgagatatcaac-tttttcagacacataaaagctaaaatatgaatcataccag-cagataagcactaagagatgttaaagaaagtcctctggacaagaggaaaatgacattataggagacctgatagaagcacaggaaggcatagcatgttttgctgggtatagaacatacagagaaataaaacgtgtgcccacaaggacatgaaggagggcggggaatggaagtgtgctt--ctgtaaggttattaaactgtcatgacatggtataatattatttgaagataga-ctgcgataagtggaaggtgcacactataaaccctaaaatgtatgcacgtacacacacacttacatatgcacaaacagagttatggggaataagccaaca-aaagtgactaagtgggataatttaaaaatacccagtccagaagaagattggctaagagg-aacaggaaac-aaaaagtaggcaggataaataaaacacaaatagcaagatggtggtttaaatccaaccattatcaa-cagtaccattagatgaaaatgatctataatcattggtctaattcaacggcagtttgtcagattgaataagaaagcaagacccaacgaa-ttgctgcctacccaaaatccac-tttaaatgta-aattcacaaattcatg-aaaactaacgggattttaaaagctacactgtgctaacgctagtc----agaaaaaaagctggagcagctatattaatattgga-----------------caa i rheMac8.chr3 C 0 I 1270 s macFas5.chr3 33588978 2623 + 192294377 acatacaatcgatttttctatggaagttaaatcctgcaacttggctaaagtaa-tttatttgtactaatagtttggtttctgtggTggtaaaattcacgtattataaaattcactattttcacaatttggaagtgcacaattcagtggcatctagttcgttcacaatgttgtcggccgtaaccactgtcttgttctgggccattggcatcaccatgaaaggagacaccacatcaatcaagggaggaactctctctttctcccttcccctggctcctggcaccactaatctgc-gttctgcctctttagatttgcccatttcatagacctggaatcatataacctgtggccctttctgtcagtcttctttcactcatcatgttttcgatttcaaggttcatccatattgtggcatgttagtgcttcattcctgttcactgctgagtaatattccatcatgtgagtcgaccacactttctcagtgcctatgctaattgtttgtaggtttcttaagatatttcctcatacgtgattcatgatatctgcataaagaggcagttc-ttcttcttcctttcccatgtttatgttttAATTGTAAttttatttaaagttacctgtgtctctgtctttaaagtgcagttttggaagatagcatgtgtgtgggtcttattttcatatctattctgacaacttccaccttttagctgaaatctttggtccactaatatttaaataaggattgacatggttatgtttgggtctgtaattttatgccttgttctctatatacatatcctccagttttcccctttgttcttcatttc------tttttttaggattatgtgaatatttg--gatggatttttctcctcattatggtttgtgaatACGTGTGAATACTTATTGATTGATTTTTCTCTTTATTCAGCTTTAtcagcatggtgtcagcccagtagtggagcataatcagtccgagactaatttaggccccacccgataaagcttaaaatcaagcctcaaatgtatcaaattgtttccaagtaaaggaacttcatcccataaaagttt-taaaataattttaggagtgcaaaactatccaggatctaacaaggaaaagtacgtgatgtctagcatacagtaaaaaattaccaagtatgcaaagaggcaggaaaacatatcatgtcatgaggaggaatatcaacaactgaaaactgactcacaaatggcacagatgcaggaattcatagataaagatggactgtagttattatcactctgctccacatgataatgttaagtagagatatgaaagacattaaaaagccccaagtcaaacttttagagatgaaaccatttttgagataaaggaaattcactggatgagattatgagattagagagacactacaaaaggaaagatcaatgaacttgaaggtgtgtaatagaaaccatccaaagtgaaacacagacagaaaacagaccccttcgaaagcagcaggaagctagttgggaggcaacttcaattggcctaaaattcatacatttagagtcccagaaagaaaacaaagaagaaaaaaag-agaaaaaaaggaagataaaatgatcgaaatcttttcaaatttgtttttttaaagctacatatcccaatccaaaaagtacgaagtatgaagaaggcacatcttaatcaaattgcttaaattgggtgagaatgagacaatcttaacagcaggcagaagacaagagacatgctaggtacagaggaacaaagacaaggatgatggcaggtttctccttgaaaatgaggcgagc-tagaggacagtggaacaagctctgcaaagtcctgccgggagaagcttgttgattcatgattccatacctggcaacaaaggtagaaacagggtgagatatcaac-tttttcagacacataaaagctaaaatatgaatcataccag-cagataagcactaagagatgttaaagaaagtcctctggacaagaggaaaatgacattataggagacctgatagaagcacaggaaggcatagcatgttttgctgggtatagaacatacagagaaataaaacgtgtgcccacaaggacatgaaggagggcggggaatggaagtgtgctt--ctgtaaggttattaaactgtcatgacgtggtataatattatttgaagataga-ctgcgataagtggaaggtgcacactataaaccctaaaatgtatgcacgtacacacacacttacatatgcacaaacagagttatggggaataagccaaca-aaagtgactaagtgggataatttaaaaatacccagtccagaagaagattggctaagagc-aacaggaaac-aaaaagtaggcaggataaataaaacacaaatagcaagatggtggtttaaatccaaccattatcaa-cagtaccattagatgaaaatgatctataatcattggtctaattcaacggcagtttgtcagattgaataagaaagcaagacccaacgaa-ttgctgcctacccaaaatccac-tttaaatgta-aattcacaaatacatg-aaaactaacgggattttaaaagctacactgtgctaacgctagtc----agaaaaaaagctggagcagctatattaatattgga-----------------caa i macFas5.chr3 C 0 I 17 s macNem1.NW_012019910v1 4350344 2613 - 9440265 acatacaatcgatttttctatggaagttaaatcctgcaacttggctaaactaa-tttatttgtactaatagtttggtttctgtggTggtaaaattcacgtattataaaattcactattttcacaatttggaagtgcacaattcagtggcatctagttcgttcacaatgttgttggccataaccactgtcttgttctgggccattggcatcaccatgaaaggagacaccacatcaatcaagggaggaactctctctttctcccttcccctggctcctggcaccactaatctgc-gttctgcctctttagatttgcccatttcatagacctggaatcatataacctgtggccctttctgtcagtcttctttcactcatcatgttttcgatttcaaggttcatccatattgtggcatgttagtgcttcattcctgttcactgctgagtaatattccatcatgtgagtcgaccacactttctcagtgcctatgctaattgtttgtaggtttcttaagatatttcctcatacgtgattcatgatatctgcataaagaggcagttc-ttcttcttcctttcccatgtttatgttttaattGTAAttttatttaaagttacctgtgtctctgtctttaaagtgcagttttggaagatagcatgtgtgtgggtcttattttcatatctattctgacaacttccaccttttagctgaaatctttggtccactaatatttaaataagtattgacatggttatgtttgggtctgtaattttatgccttgttctctatatacatatcctccagttttcccctttgttcttcatttc------tttttttaggattatgtgaatattta--gatggatttttctcctcattatggtttgtgaatACGTGTGAATACTTATTGATTGATTTTTCTCTTTATTCAGCTTTAtcagcatggtgtcagcccagtaatggagcataatcagtccgagactaatttaggccccacccgataaagcttaaaatcaagcctcaaatgtatcaaattgtttccaagtaaaggaacttcatcccataaaagttt-taaaataattttaggagtgcaaaactatccaggatctaacaaggaaaagtacgtgatgtctagcatacagtaaaaaattaccaagtatgcaaagaggcaggaaaacatatcatgtcatgaggaggaatatcaacaactgaaaactgactcacaaatggcacagatgcaggaattcatagataaagatggactgtagttattatcactctgctccacatgataatgttaagtagagatatgaaagacattaaaaagccccaagtcaaacttttagagatgaaaccatttttgagataaaggaaattcactggatgagattatgagattagagagacactacaaaaggaaagatcaatgaacttgaaggtgtgtaatagaaaccatccaaagtgaaacacagacagaaaacagaccccttcgaaagcagcaggaagctagttgggaggcaacttcaattggcctaaaattcatacatttagagtcccagaaagaaaacaaaga-----------agaaaaaaaggaagataaaatgatcgaaatcttttcaaatttgttttttaaaagctacatatcccaatccaaaaagtacgaagtatgaagaaggcacatcttaatcaaattgcttaaattgggtgagaatgagacaatcttaacagcaggcagaagacaagagacatgctaggtacagaggaacaaagacaaggatgatggcaggtttctccttgaaaatgaggcgagc-tagaggacagtggaacaagctctgcaaagtcctgccgggagaagcttgttgattcatgattccatacctggcaacaaaggtagaaacagggtgagatatcaac-tttttcagacatataaaagctaaaatattaatcataccag-cagataagcactaagagatgttaaagaaagtcctctggacaagaggaaaatgacattataggagacCCGATAGAAGCACAGGAAGGCatagcatgttttgctgggtatagaacatacagagaaataaaacgtgtgcccacaaggacatgaaggagggcggggaatggaagtgtgctt--ctgtaaggttattaaactgtcatgacgtggtataatattatttgaagataga-ttgcgataagtggaaggtgcacactataaaccctaaaatgtatgcacgtacacacacacttacatatgcacaaacagagttatggggaataagccaaca-aaagtgactaagtgggataatttaaaaatacccagtccagaagaagattggctaagagg-aacaggaaac-aaaaagtaggcaggataaataaaacacaaatagcaagatggtggtttaaatccaaccattatcaa-cagtaccgttagatgaaaatgatctataatcattggtctaattcaacggcagtttgtcagattgaataagaaagcaagacccaatgaa-ttgctgcctacctaaaatccac-tttaaatgta-aattcacaaatacatg-aaaactaacgggattttaaaagctacactgtgctaacgctagtc----agaaaaaaagctggagcagctatattaatattgga-----------------caa i macNem1.NW_012019910v1 C 0 I 1174 s cerAty1.NW_012002954v1 16943247 2621 - 21915920 acatacaatcgatttttctatggaagttaaatcctgcaacttggctaaactaa-tttatttgtactaatagtttggtttctgtggTggtaaaattcacgtattataaaattcactattttcacaatttggaagtgcacaattcagtggcatctagtgcgttcacaacgttgtcggccgtaaccactgtctggttctgggtcattggcatcaccatgaaaggacataccacatgaatcaagggaggaactctctcttcctcccttcccccggctcctggcaccactaatctgt-gttctgcctctttagatttgcccatttcatagacctggaatcatataacctgtggccctttctgtcagtcttctttcactcatcatgttttcgatttcaaggttcatcggtattgtggcatgttagtgcttcattcctgttcactgctgagtaatattccatcatgtgagtcgaccacactttCTCAGTGCCTATGCTAAttgtttgtaggtttcttaagatatttcctcatacgtgattcatgatatctgcataaagaggtag----ttcttcttcctttcccatgtttatgttttAATTGTAAttttatttaaagttacctgtgtctctgtctttaaagtgcagttttggaagatagcatgtgtgtgggtcttattttcatatctattctgacaacttccgccttttagctgaaatctttggtccactaatatttaaataagtattgacatggttatgtttgggtctgtaattttatgccttgttctctatatacatatcctccagttttcccctttgttcctcatttc------tttttttaggattatgtgaatatttA--GATGGATTTTTCTCCTCATTATGGTTTGTGAATACGTGTGAATACTTATTGATTGATTTTTCTCTTTATTCAGCTTTATCAGCGTGGTGTCAGctcagtagtggagcataatcagtccgagactaatttaggccccacccgataaagcttaaaatcaagcctcaaatgtatcaaattgtttccaagtaaaggaacttcatcccataaaagttt-taaaataattttaggagtgcaaaactatccaggatctaacaaggaaaagtacgtgatgtctagcatacagtaaaaaattaccaagtatgcaaagaggcaggaaaacatatcatgtcatgaggaggaatatcaacaactgaaaactgactcacaaatggcacagatgcaggaattcatagataaagatggactgtagttattatcactctgctccacatgataatgttaagtagagatatgaaagacattaaaaagccccaagtcaaacttttagagatgaaatcatttctgagataaaggaaattcactggatgagattatgagattagacagacactacaaaaggaaagatcaatgaacttgaaggtgtataatagaaaccatccaaagtgaaacacagacagaaaacagaccccttcgaaagcagcaggaagctagttgggaggcaactttaattgacctaaaattcatacatttagagtcccagaaagaaaacaaagaaaaaaaaaaacagaaaaaaaggaagataaaatgatcgaaatcttttcaaatttgttttttaaaagctacatatcccaatccaaaaagtatgaagtatgaagaaggcacatcttaatcaaattgcttaaattgggtgagaatgagacaatcttaacagcaggcagaagacaacagacgtgctaggtacagaggaacaaagacaaggatgatggcaggtttctccttgaaaatgaggcgagc-tagaggacagtggaacaagctctgcaaagtcctgccgggagaagcttgttgattcatgattccatacctggcagcaaaggtagaaacagggtgagatatcaac-tttttcagacatataaaagctaaaatattaatcataccag-cagataagcactaagagatgttaaagaaagtcctctggacaagaggaaaatgacattataggAGACCCGATAGAAGCACAGGAAGGCATAGCatgttttgctgggtatagaacatacagaaaaataaaacatgtgcccacaaggacatgaaggagggcggggaatggaagtgtgctt--ctgtaaggttattaaactgtcatgacgtggtataatattatttgaagataga-ttgcgataagtggaaggtgcacactataaaccctaaaatgtatgcacgtacacacacacttacatatgcacaaacagagttatggggaataagccaaca-aaagtgactaagtgggataatttaaaaatacccagtccagaagaagattggctaagagg-aacaggaaac-aaaaagtaggcaggataaataaaacacaaatagcaagatggtggtttaaatccaaccattatcaa-cagtactgttagacgaaaatgatctataatcattggtctaattcaacggcagtttgtgggattgaataagaaagcaagacccaacgaa-ttgctgcctacccaaaatccac-tttaaatgta-aattcacaaatacatg-aaaactaacggaattttaaaagctacactgtgctaacgctagtc----agaaaaaaagctggagcagctatattaatattgga-----------------caa i cerAty1.NW_012002954v1 C 0 I 989 s manLeu1.NW_012101810v1 103934 2621 - 2515279 acatacaattgatttttctatggaagttaaatcctgcaacttggctaaactaa-tttatttgtactaatagtttGGTTTCTGTGGTggtaaaattcacgtattataaaattcactatattcacaatttggaagtgcacaattcagtggcatctagtgcattcacaacattgtcggccgtaaccactgtccggttctgggccattggcatcaccatgaaaggagacaccacatcaatcaagggaggaactctctcttcctcccttcccccggctcctggcaccactaatctgc-gttctgcctctttagatttgcccatttcatagacctggaatcatataacctgtggccctttctgtcagtcttctttcactcatcatgttttcgatttcaaggttcatccgtattgtggcatgttagtgcttcattcctgttcactgctgagtaatattccatcatgtgagtcgaccacactttCTCAGTGCCTATGCTAATTGTTTGTAGGTTTCTTAAGATATTTCCTCATATGTGATTCATGATATCTGCATAAAGAGGCAG----TTCTTCTTCCTTTCCCATGTTTATGTTTTAATTGTAattttatttaaagttacctgtgtctccatctttaaagtgcagttttggaagatagcatgtgtgtgggtcttattttcatatctattctgacaacttccgcctttgagctgaaatctttggtccactaatatttaaataagtattgacatggttatgtttgagtttgtaattttatgctttgttctctatatacatatcctccagttttcccctttgttcctcatttc------tttttttaggattatgtgaatatttA--GATGGATTTTTCTCCTCATTATGGTTTGTGAATACGTGTGAATACTTATTGATTGATTTTTCTCTTTATTCAGCTTTATCAGCGTGGTGTCAGctcagtattggagcataatcagtccgagactaatttaggccccacccgataaagcttaaaatcaagcctcaaatgtatcaaattgtttccaagtaaaggaacttcatcccataaaagttt-taaaataattttaggagtgcaaaactatccaggatctaacaaggaaaagtacgtgatgtctagcatacagtaaaaaattaccaagtatgcaaagaggcaggaaaacatatcatgtcatgaggaggaatatcaacaactgaaaactgactcacaaatggcacagatgcaggaattcatagataaagatggactgtagttattatcactctgctccacatgataatgttaagtagagatatgaaagacattaaaaagccctaagtcaaacttttagagatgaaaccatttctgagataaaggaaattcactggatgagattatgagattagacagacactacaaaaggaaagatcaatgaacttgaaggtgtgtaatagaaaccatccaaagtgaaacacagacagaaaacagatcccttcgaaagcagcaggaagctagttgggaggcaactttaattggcctaaaattcgtacatttagagtcccagaaagaaaacaaagaaaaaaaaaaacagaaaaaaaggaagataaaatgatcgaaatcttttcaaatttgttttttaaaaactacatatcccaatccaaaaagtatgaagtatgaagaaggcacatcttaatcaaattgcttaaattgggtgagaatgagacaatcttaacagcaggcagaagacaagagacgtgctgggtacagaggaacaaagacaaggatgatggcaggtttctccttgaaaatgaggcgagc-tagaggacagtggaacaagctctgcaaagtcctgccgggagaagcttgttgattcatgattccatacctggcagcaaaggtagaaacagggtgagatatcaac-tttttcagacatataaaagctaaaatattaatcataccag-cagataagcactaagagatgttaaagaaagtcctctggacaagaggaaaatgacattataggagacccgatagaagcacaggaaggcatagcatgttttgctgggtatagaacatacagaaaaataaaacgtgtgcccacaaggacatgaaggagggcggggaatggaagtgtgctt--ctgtaaggttattaaactgtcatgacgtggtataatattatttgaagataga-ttgtgataagtggaaggtgcacactataaaccctaaaatgtatgcacgtacacacacacttacatatgcacaaacagagttatggggaataagccaaca-aaagtgactaagtgggataatttaaaaatacccagtccagaagaagattggctaagagg-aacaggaaac-aaaaagtaggcaggataaataaaacacaaatagcaagatggtggtttaaatccaaccattatcaa-cagtactgttagacgaaaatgatctataatcattggtctaattcaacggcagtttgtcagattgaataagaaagcaagacccaacgaa-ttgctgcctacccaaaatccac-tttaaatgta-aattcacaaatacatg-aaaactaacgggattttaaaagctacactgtgctaacgctagtc----agaaaaaaagctggagcagctatattgatattgga-----------------caa i manLeu1.NW_012101810v1 C 0 I 786 e colAng1.NW_012117710v1 259340 3329 + 6586416 I e otoGar3.GL873611 2201328 2988 - 8137123 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 78977 3914 - 21531802 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 334683 3636 - 2409723 I e cebCap1.NW_016107703v1 469724 3375 - 2125214 I e calJac3.chr2 146634255 15820 - 204313951 I e nomLeu3.chr20 120774 4505 + 85365473 I a score=10926.000000 s hg38.chr7_KI270899v1_alt 107547 29 + 190869 tgaacacaaccagcattataaagaaggtc s panTro5.chr7_NW_015973501v1_random 5681 26 - 19153 T-AACACAACCAGCA-TATAAAGAA-GTC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 68353 29 - 432965 tgaacacaaccagcattataaagaaggtc i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33591618 29 + 192294377 tgaacacaaccagcattatgaagaagatc i macFas5.chr3 I 17 C 0 e colAng1.NW_012117710v1 259340 3329 + 6586416 I e otoGar3.GL873611 2201328 2988 - 8137123 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 78977 3914 - 21531802 I e manLeu1.NW_012101810v1 106555 786 - 2515279 I e cerAty1.NW_012002954v1 16945868 989 - 21915920 I e macNem1.NW_012019910v1 4352957 1174 - 9440265 I e rheMac8.chr3 33975264 1270 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 334683 3636 - 2409723 I e cebCap1.NW_016107703v1 469724 3375 - 2125214 I e calJac3.chr2 146634255 15820 - 204313951 I e nomLeu3.chr20 120774 4505 + 85365473 I a score=4562.000000 s hg38.chr7_KI270899v1_alt 107576 8 + 190869 attttgta s panTro5.chr7_NW_015973501v1_random 5707 8 - 19153 ATTTTGTA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 68382 8 - 432965 attttgta i gorGor5.CYUI01015914v1 C 0 I 454 s macFas5.chr3 33591647 8 + 192294377 gttttgta i macFas5.chr3 C 0 I 1216 s otoGar3.GL873611 2204316 8 - 8137123 acttcaga i otoGar3.GL873611 I 2988 C 0 e colAng1.NW_012117710v1 259340 3329 + 6586416 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 78977 3914 - 21531802 I e manLeu1.NW_012101810v1 106555 786 - 2515279 I e cerAty1.NW_012002954v1 16945868 989 - 21915920 I e macNem1.NW_012019910v1 4352957 1174 - 9440265 I e rheMac8.chr3 33975264 1270 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 334683 3636 - 2409723 I e cebCap1.NW_016107703v1 469724 3375 - 2125214 I e calJac3.chr2 146634255 15820 - 204313951 I e nomLeu3.chr20 120774 4505 + 85365473 I a score=-491.000000 s hg38.chr7_KI270899v1_alt 107584 3 + 190869 -CCA s panTro5.chr7_NW_015973501v1_random 5715 3 - 19153 -CCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s otoGar3.GL873611 2204324 3 - 8137123 tct- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 259340 3329 + 6586416 I e canFam3.chr6 61005215 7098 - 77573801 I e chlSab2.chr28 78977 3914 - 21531802 I e manLeu1.NW_012101810v1 106555 786 - 2515279 I e cerAty1.NW_012002954v1 16945868 989 - 21915920 I e macNem1.NW_012019910v1 4352957 1174 - 9440265 I e macFas5.chr3 33591655 1216 + 192294377 I e rheMac8.chr3 33975264 1270 + 185818997 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e saiBol1.JH378296 334683 3636 - 2409723 I e cebCap1.NW_016107703v1 469724 3375 - 2125214 I e calJac3.chr2 146634255 15820 - 204313951 I e nomLeu3.chr20 120774 4505 + 85365473 I e gorGor5.CYUI01015914v1 68390 454 - 432965 I a score=16500.000000 s hg38.chr7_KI270899v1_alt 107587 3 + 190869 gcc s panTro5.chr7_NW_015973501v1_random 5718 3 - 19153 gcc i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 68844 3 - 432965 gcc i gorGor5.CYUI01015914v1 I 454 C 0 s rheMac8.chr3 33976534 3 + 185818997 gcc i rheMac8.chr3 I 1270 C 0 s macFas5.chr3 33592871 3 + 192294377 gcc i macFas5.chr3 I 1216 C 0 s cerAty1.NW_012002954v1 16946857 3 - 21915920 gcc i cerAty1.NW_012002954v1 I 989 C 0 s chlSab2.chr28 82891 3 - 21531802 gcc i chlSab2.chr28 I 3914 C 0 s manLeu1.NW_012101810v1 107341 3 - 2515279 gcc i manLeu1.NW_012101810v1 I 786 C 0 s colAng1.NW_012117710v1 262669 3 + 6586416 gcc i colAng1.NW_012117710v1 I 3329 C 0 s saiBol1.JH378296 338319 3 - 2409723 gcc i saiBol1.JH378296 I 3636 C 0 s otoGar3.GL873611 2204327 3 - 8137123 gcc i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e macNem1.NW_012019910v1 4352957 1174 - 9440265 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 469724 3375 - 2125214 I e calJac3.chr2 146634255 15820 - 204313951 I e nomLeu3.chr20 120774 4505 + 85365473 I a score=16676.000000 s hg38.chr7_KI270899v1_alt 107590 3 + 190869 ttt s panTro5.chr7_NW_015973501v1_random 5721 3 - 19153 ttt i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 68847 3 - 432965 ttt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33976537 3 + 185818997 ttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33592874 3 + 192294377 ttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354131 3 - 9440265 ttt i macNem1.NW_012019910v1 I 1174 C 0 s cerAty1.NW_012002954v1 16946860 3 - 21915920 ttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 82894 3 - 21531802 ttt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107344 3 - 2515279 ttt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 262672 3 + 6586416 ttt i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 338322 3 - 2409723 ttt i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2204330 3 - 8137123 tct i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 469724 3375 - 2125214 I e calJac3.chr2 146634255 15820 - 204313951 I e nomLeu3.chr20 120774 4505 + 85365473 I a score=381673.000000 s hg38.chr7_KI270899v1_alt 107593 75 + 190869 agctgggcttcttttatctgctttgagtgtgtgcagttcagggccagtcgg-aaacatgagt--agag---------tccgccaagt s panTro5.chr7_NW_015973501v1_random 5724 74 - 19153 agct-ggcttctttta-ctgctttgggtgtgtgcagttcaggggcagtcggaaaacatgagt--agag---------tctgccaagt i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 68850 75 - 432965 agctgggcttcttttatctgctttgggtgtgtgcagttcagggcctgtcgg-aaacatgagt--agag---------tctgccaagt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33976540 73 + 185818997 agctgggcttctttcatctgctttgtgtgtgtgcagttcagggccagtcgg-aaacatgagt--agag---------tctg--aagt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33592877 73 + 192294377 agctgggcttctttcatctgctttgtgtgtgtgcagttcagggccagtcgg-aaacatgagt--agag---------tctg--aagt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354134 73 - 9440265 agctgggcttctttcatctgctttgtgtgtgtgcagttcagggccagtcgg-aaacatgagt--agag---------tctg--aagt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16946863 73 - 21915920 agctgggcttctttcatctgctttgtgtgtgtgcagttcagggccagtcgg-aaacatgagt--agag---------tctg--aagt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 82897 72 - 21531802 agctgggcttctttcatctgctttgtgtgtgtgcggttcagggccagtcgg--aacatgagt--aaag---------tctg--aagt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107347 73 - 2515279 agctgggcttctttcatctgctttgtgtgtgtgcagttcagggccagtcgg-aaacatgagt--agag---------tctg--aagt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 262675 73 + 6586416 agctgggcttctttcatctgctttgtgtgtgtgcagttcagggccagttgg-aaacatgagt--agag---------tctg--aagt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650075 82 - 204313951 agctggatgtctttcatctgttTTGTGTGTGTGCAGCTCAGGGCCAGTCAG-AAGCATgagt--ttgaagtttcccctttg--caat i calJac3.chr2 I 15820 I 2 s saiBol1.JH378296 338325 82 - 2409723 agctggatatctttgatctgttttgtgcgtgtgcagcccagggccagccgg-aaacacgagt--tgtaagtttcccctttg--caat i saiBol1.JH378296 C 0 I 2 s otoGar3.GL873611 2204333 75 - 8137123 ggctgggctgctttcacctgctccttgtgtgcgtggttcagggtcagccca-agagatgggtgcagag---------ttGG--AGGT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67380 100 + 376347 I e cebCap1.NW_016107703v1 469724 3375 - 2125214 I e nomLeu3.chr20 120774 4505 + 85365473 I a score=1035507.000000 s hg38.chr7_KI270899v1_alt 107668 144 + 190869 ttccc----------------cttctggacgct--ccccccctccactggccacagcttccccaatttcgtcctgctcctgttccaggccatgaagactgtggtcttccctgaggaccccca-----gc-tcctca-----tgccctaactacatag-tgctcaggctaacagc s panTro5.chr7_NW_015973501v1_random 5798 139 - 19153 ttccc----------------cttctggacgct---cccccttccactggccacaacttcccc-atttcgttctgctcctgttccagg-catgaagactgt-gtgttccctgagga--ccca-----gc-tcctca-----tgccctaactacatagttgcccaggctaacagc i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 68925 145 - 432965 ttccc----------------cttctggacgctccccccccctccactggccacagcttccccaatttcattctgctcctgttccaggccatgaagactgtggccttccctgagga-cccca-----gc-tcctca-----tgccctaactacatag-tgcccaggctaacagc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33976613 160 + 185818997 ttcccctttgtaatccgtccccttctggatgct--ccccctctccagtggccacagcttccccaatttcattctgttcctcttccaggccatgaagactgtagtcttccctgaggaccccca-----gc-tcctca-----tatcctaactacacag-ggcccaggataacagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33592950 160 + 192294377 ttcccctttgtaatccgtccccttctggatgct--ccccctctccagtggccacagcttccccaatttcattctgttcctcttccaggccaggaagactgtagtcttccctgaggaccccca-----gc-tcctca-----tatcctaactacacag-ggcccaggataacagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354207 160 - 9440265 ttcccctttgtaatccgtccccttctggatgct--ccccctctccagtggccacagcttccccaatttcattttgttcctcttccaggccatgaagactgtagtcttccctgaggaccccca-----gc-tcctca-----tatcctaactacacag-ggcccaggataacagc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16946936 160 - 21915920 ttcccctttgtaatccttcctcttctggatgct--ccccctctccagtgaccacagcttccccaatttcattctgttcctcttccaggccatgaagactgtagtcttccctgaggaccccca-----gc-tcctca-----taccctaactacacag-ggcccaggataacagc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 82969 160 - 21531802 ttcccctttgtaatccttccccttctggatgct--ccccctctccagtggccacagcttccccaatttcgttctgttcctcttccaggccatgaagactgtggtcttccccgaggaccccca-----gc-tcctca-----tgccctaactacacag-ggcccaggataacagc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107420 160 - 2515279 ttcccctttgtaatccttccccttctggatgct--ccccctctccagtgaccacagcttccccaatttcattctgttcctcttccaggccatgaaggctgtagtcttccctgaggaccccca-----gc-tcctca-----taccctaactacacag-ggcccaggacaacagc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 262748 160 + 6586416 ttcccttttgtaaaacttccccttctggatgct--tcccctctctggtggccacagcttccccaatttcattctgctcctcttccaggccatgaagattgtggtcttccctgaggaccccca-----gc-tcctca-----tgccctaactacacag-ggcccaggctaacagc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650159 145 - 204313951 ttccc----------------cttctggacgct--ccccctctccagggaccacagcttccccaatttgattctgctcctgttccaggcaatgaagaccgtggtcttctctgaggacccctt-----gcttcctca-----tgtgctaactacacag-ggcccaggctaacagc i calJac3.chr2 I 2 C 0 s saiBol1.JH378296 338409 150 - 2409723 ttccc----------------cttctggatgct--ccccctctccagggaccacagcttccccaattccattctgctcctgttccaggccatgaagactgtggtcttccccgaggaccccctcccccacttcctca-----tgccctaactacacag-gacccaggctaacagc i saiBol1.JH378296 I 2 C 0 s cebCap1.NW_016107703v1 473099 146 - 2125214 ttccc----------------cttctggacgct--ccccctctccagggaccacagcttccccaatttcattctgctcctgttccaggccatgaagactgtggtcttccccgaggacctccc----cgcttcctca-----tgccctaactacacag-gacccaggctaacagc i cebCap1.NW_016107703v1 I 3375 C 0 s aotNan1.NW_018514293v1 67480 143 + 376347 TTCCC----------------CTTCTGGACGCT--CCCCATCTCCAGGGACCACAGCTTCCCCAATTTCATTCCGCTCCTGTTCCAGGCCATGAAGACTGTGGTCTTCCCCGAGGACCCCCC-----GCTTCCTCA-----CGCCCTAACTACAC---GGCCCAGGCTGACAGC i aotNan1.NW_018514293v1 I 100 I 34 s otoGar3.GL873611 2204408 141 - 8137123 -TCCCCTTTGCAGTCCTCTGCCTTGTGCACGCC--CCTACCCTTCAGGGCCTACAGCTTCCT--GTCTCCTGTGGATGCT-TCTCAGGCCATGAAGAC--------------------CCCA-----CC-TCCTCACGCACTGCCCTGACTGCAGGT-GGCCCAGGCGAACAGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e nomLeu3.chr20 120774 4505 + 85365473 I a score=177013.000000 s hg38.chr7_KI270899v1_alt 107812 32 + 190869 --------cacggtcaaagagaacgtgcttcctgcaactc s panTro5.chr7_NW_015973501v1_random 5937 30 - 19153 --------cacggtc-aagagaat-tgcttcctgcaactc i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69070 32 - 432965 --------cacggtcaaagagaacgtgcttcctgcaactc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33976773 32 + 185818997 --------tgcagtcaatgagaacgtgcttcctgcaaccc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593110 32 + 192294377 --------tgcagtcaatgagaacgtgcttcctgcaaccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354367 32 - 9440265 --------tgcagtcaatgagaacgtgcttcctgcaaccc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947096 32 - 21915920 --------cacagtcaatgagaacatgcttcctgcaaccc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83129 32 - 21531802 --------cacagtcaatgagaacatgcttcctgcaaccc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107580 32 - 2515279 --------cacagtcaatgagaacgtgcttcctgcaaccc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 262908 32 + 6586416 --------cacagtcaatgagaacgtgcttcctgcaaccc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650304 32 - 204313951 --------cacaggcagaaaaaacgttcatcctgcaactc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 338559 32 - 2409723 --------cacaggcagtgagaacctgcatcctgcaactc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473245 32 - 2125214 --------cacaggcagtgagaacgtgtgtcctacaactc i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2204549 40 - 8137123 CAAAAAaaaagagacagagagaattcacttcgtgctgctc i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e aotNan1.NW_018514293v1 67623 34 + 376347 I e nomLeu3.chr20 120774 4505 + 85365473 I a score=26410.000000 s hg38.chr7_KI270899v1_alt 107844 4 + 190869 cttt s panTro5.chr7_NW_015973501v1_random 5967 4 - 19153 cttt i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69102 4 - 432965 cttt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33976805 4 + 185818997 cttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593142 4 + 192294377 cttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354399 4 - 9440265 cttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947128 4 - 21915920 cttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83161 4 - 21531802 cttt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107612 4 - 2515279 cttt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 262940 4 + 6586416 cttt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650336 4 - 204313951 tgtt i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 338591 4 - 2409723 catt i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473277 4 - 2125214 catt i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 67657 4 + 376347 CGTT i aotNan1.NW_018514293v1 I 34 C 0 s otoGar3.GL873611 2204589 4 - 8137123 cctt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61005215 7098 - 77573801 I e nomLeu3.chr20 120774 4505 + 85365473 I a score=103645.000000 s hg38.chr7_KI270899v1_alt 107848 16 + 190869 atcccccgt-gtacacc----- s panTro5.chr7_NW_015973501v1_random 5971 15 - 19153 atcccccgt-gtaca-c----- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69106 16 - 432965 atcccccgt-gtacacc----- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33976809 16 + 185818997 atcccccgt-gtgcacc----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593146 16 + 192294377 atcccccgt-gtgcacc----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354403 16 - 9440265 atcccccgt-gtgcacc----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947132 16 - 21915920 atcccccgt-gtgcaac----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83165 16 - 21531802 atcccccgt-gtgcacc----- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107616 16 - 2515279 atcccccgt-gtgcaac----- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 262944 16 + 6586416 atcccccgt-gtgcacc----- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650340 16 - 204313951 ttcacccat-gtgcacc----- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 338595 16 - 2409723 atcccctgt-gcgcacc----- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473281 16 - 2125214 atcccccat-gtgcact----- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 67661 17 + 376347 ATCCCCCATGGTGCACT----- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2204593 16 - 8137123 ctcggaggt-gtgtgcc----- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61012313 21 - 77573801 ATCCTCCTT-GAACAACTCCCC i canFam3.chr6 I 7098 C 0 e nomLeu3.chr20 120774 4505 + 85365473 I a score=379340.000000 s hg38.chr7_KI270899v1_alt 107864 48 + 190869 -ccagg--t-ccgtct--tg-ctgttcactctccaacgcccacaagcagcctgtt s panTro5.chr7_NW_015973501v1_random 5986 48 - 19153 -ccagg--t-ccgtct--tg-ctgttcactctccaacacccacaagcatcctgtt i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69122 49 - 432965 -ccggg--tcccgtct--tg-ctgttcactctccaacgcccacaagcagcctgtt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125279 48 + 85365473 -CCAGG--T-CCGTCT--TG-Ctgttcactatccaacacccacaagcagcctgtt i nomLeu3.chr20 I 4505 C 0 s rheMac8.chr3 33976825 47 + 185818997 -ccagg--t-ccatct--tg-ctgttcactctccaacgcccac-agtagcctgtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593162 47 + 192294377 -ccagg--t-ccatct--tg-ctgttcactctccaacgcccac-agtagcctgtt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354419 47 - 9440265 -ccagg--t-ccatct--tg-ctgttcactctccaacgcccac-agtagcctgtt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947148 48 - 21915920 -ccagg--t-ccatct--tg-ctgttcactctccaatacccacaagtagcctgtt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83181 48 - 21531802 -ccagg--t-ccgtct--tg-ctgttcactctccaacgcccacaagcagcctgtt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107632 48 - 2515279 -ccagg--t-ccatct--tg-ctgttcactctccaatgcccacaagtagcctgtg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 262960 48 + 6586416 -ccagg--t-ccgtct--tg-ctgttcactctccaacgcccacaagcagcctgtt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650356 48 - 204313951 -ccagg--c-ctgtct--tg-ctgttcactatccaatgcccaccagtggcctgtc i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 338611 47 - 2409723 -ccagg--c-ctgtct--tg-ctgttcgttctccagtgcccaccagcggcctgt- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473297 48 - 2125214 -ccagg--c-ctgtct--tg-ctgttcattctccaatgcccaccagcggcctgtc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 67678 50 + 376347 -CCCAGGCC-CTGTCT--TGCCTGTTCACTCTCCGATGCCTACCAGCGGCTGTT- i aotNan1.NW_018514293v1 C 0 I 23 s otoGar3.GL873611 2204609 48 - 8137123 -ccgag--t-ctgcctgctg-ctgttc--tcttccatgccttcaagcagctcctt i otoGar3.GL873611 C 0 I 5 s canFam3.chr6 61012334 49 - 77573801 CCCGAA--C-TGCTGC--TG-CTGCTCTCTCCCCAGCCCTCAAAAGGCTCCTGTT i canFam3.chr6 C 0 C 0 a score=244175.000000 s hg38.chr7_KI270899v1_alt 107912 25 + 190869 tgcattgtgtacagattttgaagct s panTro5.chr7_NW_015973501v1_random 6034 25 - 19153 tgcattgtgtacagattttgaagct i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69171 25 - 432965 tgcattgtgtacagattttgaagct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125327 25 + 85365473 tgcattgtgtacagattttgaagct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33976872 25 + 185818997 tgcattgtgtacagattttgaagct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593209 25 + 192294377 tgcattgtgtacagattttgaagct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354466 25 - 9440265 tgcattgtgtacagattttgaagct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947196 25 - 21915920 tgcattgtgtacagattttgaagct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83229 25 - 21531802 tgcattgtgtacagattttgaagct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107680 25 - 2515279 tgcattgtgtacagattttgaagct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263008 25 + 6586416 tgcattgtgtacagattttgaagct i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650404 25 - 204313951 tgcactgtgtacaggttttgaagct i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 338658 21 - 2409723 ----ctgtgtacagattttgaagct i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473345 25 - 2125214 tgaattgtgtacagattttgaagct i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2204662 25 - 8137123 tgcattgtgtacagattttgtagct i otoGar3.GL873611 I 5 C 0 s canFam3.chr6 61012383 25 - 77573801 TGCCTTCTCTACAGATTTCCTAGTT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 67728 23 + 376347 I a score=1947717.000000 s hg38.chr7_KI270899v1_alt 107937 191 + 190869 -gttttctgtaagggagtgggtttggtgtgatcttacaaaatcctt--acaggaa-gcagaaCCAGCAATTACCCATCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGTGTAGGCTTCGTCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA-GAAACTTGAGAAAC s panTro5.chr7_NW_015973501v1_random 6059 189 - 19153 -gttttctgtaaggga--gggtttggcgtgatgttacaaaatcctt--acaggaa-gcagaaCCAGCAATTACCCATCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGTGTAGGCTTCGTCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA-GAAACTTGAGAAAC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69196 191 - 432965 -gttttctgtaagggagtgggtttggtgtgatcttacaaaatcctt--acaggaa-gcagaaCCAGCAATTACCCATCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGTGTAGGCTTCGTCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA-GAAACTTGAGAAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125352 191 + 85365473 -gttttctgtgagggagtgggtttggcgtgatcttacaaaatcctc--acaggaa-gcagaaCCAGCAATTACCCATCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGTGTATGCTTCGTCTGTTGCAAAGGTCGCAGTGGCTTCACT-CCAA-GAGACTTGAGAAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33976897 191 + 185818997 -gttttctgtgagggagtgggtttggtgtgatcttacaaaaccctc--acaggaa-gcagaaCCAGCAATTACCCGTCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGCGTATGCTTCGTCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA-GAAACTTGAGACAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593234 191 + 192294377 -gttttctgtgagggagtgggtttggtgtgatcttacaaaaccctc--acaggaa-gcagaaCCAGCAATTACCCGTCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGCGTATGCTTCGTCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA-GAAACTTGAGACAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354491 191 - 9440265 -gttttctgtgagggagtgggtttggtgtgatcttacaaaaccctc--acaggaa-gcagaaCCAGCAATTACCCGTCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGCGTATGCTTCGTCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA-GAAACTTGAGACAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947221 191 - 21915920 -gttttctgtgagggagtgggtttggtgtgatcttacaaaaccctc--acaggaa-gcagaaCCAGCAATTACCCGTCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGCGTATGCTTCGTCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA-GAAACTTGAGACAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83254 191 - 21531802 -gttttctgtgagggagtgggtttggtgtgatcttacaaaaccctc--acaggaa-gcagaaCCAGCAATTACCCATCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGCATATGCTTCGTCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA-GAAACTTGAGACAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107705 191 - 2515279 -gttttctgtgagggagtgggtttggtgtgatcttacaaaaccctc--acaggaa-gcagaaCCAGCAATTACCCGTCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGCGTATGCTTCGTCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA-GAAACTTGAGACAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263033 191 + 6586416 -gttttctgtgagggagtgggtttggtgtgatcttacaaaaccctt--acaggaa-gcagaaCCAGCAATTACCCGTCCACTTTTAGAACTGCCTTGTGCATGAACCT-TTTGTCCTTTGAGTC-ACACT---TGGAAAAAGTGTACGCTTCGTCTGCTGCAAAGGTCACGGTGGCTTCACT-CCAA-GAAACTTGAGACAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650429 187 - 204313951 -g-tttcagtgagtgactgagtttggtttaatcttacaaaatcctt--acaggaa-gcagaaCCAGCAATTACCCATCCACTTTTAGAACTGCCTTGGGCATGAACCT-TTTGTCC-TTGAGTC-ACACT---TGGAAAAAGTGTATGTTT-ATCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA--AAACTTGAGAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 338679 188 - 2409723 -gttttcagcgagggagtgggtttggtgtaatcttacaaaatcctt--acaggaa-gcagaaCCAGCAATTACCCATCCACTTTTAGAACTGCCTTGTGGGTGAACCT-TTTGTCC-TTGAGTC-ACACT---TGGAAAAAGTGTATGTTT-AGCTGTTGCAAAGGTCACGGTGGCTTCACT-CTCA--AAACTTGAGAAAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473370 188 - 2125214 -gttttcagtgagggagtgggtttggtgtaatcttacaaaatcctt--acaggaa-gcagaaCCAGCAATTACCCATCCACTTTTAGAACTGCCTTGTGGGTGAACCT-TTTGTCC-TTGAGTC-ACACT---TGGAAAAAGTGTATGTTT-ATCTGTTGCAAAGGTCATGGTGGCTTCACT-CCAA--AAACTTGAGAAAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 67751 196 + 376347 -GTTTTCAGTGAGTGAGTGGGTTTGGTGTAATCTTACAAAATTCCTTAACAGGAAGGCAGAACTAGCAATTACCGA-CCGCTTTTAGAACTGCCTTGTAC-TGAACCTCTTTGTCC-TTGAGTCAACACTAACTTGGAAAAGTGTATGTTTAATCTGTTGCAAGGGTCATGGTGGCTTCACTCCCAA--AAACTTGAGAAAC i aotNan1.NW_018514293v1 I 23 I 478 s otoGar3.GL873611 2204687 191 - 8137123 -gttttctatgagggagtgagtttggtgtgatcttacaaaatcatt--acaggaa-atggaaCCAGCAATTACCCATCCACTTTTAGAACTGCTTTGTGCATGAACCT-TACTTTCTTTGAGTC-ACACT---GGAAATAAGTGTATGTTTTGTCT-TTACAAAGGTCATGGTGGCTTCACT-GCAAAGAAACTTGAAAAAC i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61012408 188 - 77573801 GTTTTTCTGTGAAGAACGGAGTGTGGCGTGATCTTACAAAATCATT--ACAGGAA-GCACAGGCAGCAATTACCCATCCACTTTTAG-GCCGCCTTCTGCAGGAACCT-CACATCCTTTGAGTC-ACGCT---GGGGGAAAGCGTACGTGTCATCTGCTCCGGAGGTCACGATGGTTTCCCT-GCGT-GGG---TGAGAAAC i canFam3.chr6 C 0 C 0 a score=307532.000000 s hg38.chr7_KI270899v1_alt 108128 39 + 190869 AGTTATTGTTTTAAACAGGGCACAACTGCAGTGTCCTGA s panTro5.chr7_NW_015973501v1_random 6248 39 - 19153 AGTTATTGTTTTAAACAGGGCACAACTGCAGTGTCCTGA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69387 39 - 432965 AGTTATTGTTTTAAACAGGGCACAACTGCAGTGTCCTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125543 39 + 85365473 AGTTATTGTTTCAAACAGGGCACAACTGCAGTGTCCTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33977088 39 + 185818997 AGTTATTGTTTTAAACAGGGCACAACTGCAGTGTCCTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593425 39 + 192294377 AGTTATTGTTTTAAACAGGGCACAACTGCAGTGTCCTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354682 39 - 9440265 AGTTATTGTTTTAAACAGGGCACAACTGCAGTGTCCTGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947412 39 - 21915920 AGTTATTGTTTTAAACAGGGCACAACTGCAGTGTCCTGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83445 39 - 21531802 AGTTATTGTTTTAAACAGGGCACAACTGCAGTGTCCTGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107896 39 - 2515279 AGTTATTGTTTTAAACAGGGCACAACTGCAGTGTCCTGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263224 39 + 6586416 AGTTATTGTTTTAAACAGGGCACAACCGCAGTGTCCTGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650616 39 - 204313951 AGTCATTTTCTTAAGCAAAGTACAATGGCAGCATCATGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 338867 39 - 2409723 AGTCATTTTCTTAAGCAGGGCACAATGGCAGCATCGTGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473558 39 - 2125214 AGTCATTTTCTTAAGCAGGGCACAATGGCAGCATTGTGA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2204879 39 - 8137123 GATTATTGTCTTAAATAGAGCTTGACTGCAGGGTAGTGA i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61012596 36 - 77573801 ACACAGTGTCTCGTCGGGGACAC---TGCAGCCCCATGA i canFam3.chr6 C 0 I 1729 e aotNan1.NW_018514293v1 67947 478 + 376347 I a score=1009572.000000 s hg38.chr7_KI270899v1_alt 108167 222 + 190869 GGAGCCCT-GCATGGCCATGGAGTTTGCTGGATGAGGGATATGGACGGGCTCCTGC----AGCGAGA-----ACA-------------------------------------------------------------gagacagagagggagagggagagacaaagag-gagacagagagggagagggagagacaaagaggagacagagagggagaggg----agagacaaagaggagacagagatacaggcagagagaa------------------gtgggagagacaga-ggagagagAATATCTGGCAAACACA s panTro5.chr7_NW_015973501v1_random 6287 283 - 19153 GGAGCCCT-GCATGGCCATGGAGTTTGCTGGATGCAGGATATGGACGGGCTCCTGC----AGCgaga-----acagagacagagagggagagggagagacaaagagggacagagagggagagggagagacaaagaggagacagagagggagagggagagacaaagag-gagacagagagggagagggagagacaaagaggagacagagagggagaggg----agagacaaagaggagacagagatacaggcagagagaa------------------gtgggagagacaga-ggagagagaaCATCTGGCAAACGCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69426 191 - 432965 GGAGCCCT-GCATGGCCATGGAGTTTGCTGGATGAGGGATATGGACGGGCTCCTGC----AGCgaga-----aca-------------------------------------------------------------gagacagagagggagagggagagacaaagag-gagacagagag-------------------------------ggagaggg----agagacaaagaggagacagagatacaggcagagagaa------------------gtgggagagacaga-ggagagagaaCATCTGGCAAACGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125582 160 + 85365473 GGAGCCCT-GCACGGCCATGGAGTCTGCTGGATGAGGGATATGGATGGGCTCCTGC----AGAGAGG-----ACA-------------------------------------------------------------GAGATACAGAG---------------------------------------------------------------GCAGATGG----AGAGACAAAGAGGAGACAGAGATACAGGCAGAGAGAA------------------GT-GGAGAGACAGAGGGAGACAGAACATCTGGCAAACCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33977127 160 + 185818997 AGAGCCCT-GCCCAGCCATGGAGTTTGCTGGATGTGGGACATGGACGGGCTCCTGC----agagaga-----aca-------------------------------------------------------------gagatagaaag---------------------------------------------------------------ggacaggg----agagacaaagaggagacggagatagaggcagacagaa------------------gt-tgagagatagaaggagagagaacaTCTGGCAAACCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593464 160 + 192294377 AGAGCCCT-GCCCAGCCATGGAGTTTGCTGGATGTGGGACATGGACGGGCTCCTGC----agagaga-----aca-------------------------------------------------------------gagatagaaag---------------------------------------------------------------ggacaggg----agagacaaagaggagacggagatagaggcagacagaa------------------gt-tgagagatagaaggagagagaacaTCTGGCAAACCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354721 160 - 9440265 AGAGCCCT-GCCCAGCCATGGAGTTTGCTGGATGTGGGACATGGACGGGCTCCTGC----agagaga-----aca-------------------------------------------------------------gagatagaaag---------------------------------------------------------------ggacaggg----agagacaaagaggagacggagatagaggcagacagaa------------------gt-tgagagatagaaggagagaGAACATCTGGCAAACCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947451 160 - 21915920 AGAGCCCT-GCCCAGCCATGGAGTTTGCTGGATGTGGGACATGGACGGGCTCCTGC----agagaga-----aca-------------------------------------------------------------gagatagaaag---------------------------------------------------------------ggacaggg----agagacaaagaggagacggagatagaggcagacagaa------------------gt-tgagagatagaaggagagaGAACATCTGGCAAACCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83484 160 - 21531802 AGAGCCCT-GCCCGGCCATGGAGTTTGCTGGATGAGGGACATGGATGGGCTCCTGC----agagaga-----aca-------------------------------------------------------------gagctagagag---------------------------------------------------------------ggacaggg----agagacaaagaggagacggagatagaggcagacagaa------------------gt-tgagagacagagggagagGGAACATCTGGCAAACCCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 107935 160 - 2515279 AGAGCCCT-GCCCAGCCATGGAGTTTGCTGGATGTGGGACATGGACGGGCTCCTGC----agagaga-----aca-------------------------------------------------------------gagatagaaag---------------------------------------------------------------ggacaggg----agagacaaagaggagacggagatagaggcagacagaa------------------gt-tgagagatagaaggagagaGAACATCTGGCAAACCCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263263 159 + 6586416 AGAGCCCT-GCCTGGCCATGGAGTTTGCTGGATGAGGGACATGGATGGGCTCCTGC----agagaga-----acg-------------------------------------------------------------gagatagagag---------------------------------------------------------------ggacaggg----agagacaaagaggagatggagatagaggcaggcagag------------------gt-tgagagacagagggagaga-AACATCTGGCAAACCCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650655 156 - 204313951 AGAGCCCT-GCATGGCCGTGGAGTTTGCTGGATGAGGGACATGGATGGGCTACTGC----agagaga-----aca-------------------------------------------------------------gagat----ag---------------------------------------------------------------ggagaggg----agacacaaagtggagatggagatggaggcagagagaa------------------gt-caggagacagagggagagagaATATCTGGCAAACACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 338906 127 - 2409723 AGAGCCCT-GCATGGCCGTGGAGTTTGCTGGATGAGGGACGTGGATGGGCTACTGC----AGAGAGA-----ACA-------------------------------------------------------------GA------------------------------------------------------------------------------------------------GAGACGGAGATGGAGGCAGAGTGAA------------------GT-CGGGAGACA----GAGAGACAACATCCGGCAAACCCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473597 160 - 2125214 AGAGCCCT-GCATGGCCGTGGAGTTTGCTGGATGAGGGACGCGGACGGGCTACTGC----agagaga-----aca-------------------------------------------------------------gagatagacag---------------------------------------------------------------ggagaggg----agacacaaagcagagacggagatggaggcagagagaa------------------gt-cgggagacagacggagagagaACATCTGGCAAACCCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2204918 223 - 8137123 AGAACCCTGGAATAGCCATGGGGTTTGCTAGAGGAAGAATGAGAAGTGGCTACTACCCAAagagagagggagaaa-------------------------------------------------------------gagagagagagagggagatacggaggaagggagagacacacag-------------------------------agacagagacacagacacagaga-gagtcagagatacagacacagagaaagacagggaggagagatggg-agagatatagagagagggagagagaCTGACACACACA i otoGar3.GL873611 C 0 I 4436 e canFam3.chr6 61012632 1729 - 77573801 I e aotNan1.NW_018514293v1 67947 478 + 376347 I a score=399258.000000 s hg38.chr7_KI270899v1_alt 108389 51 + 190869 TTCCACTTTCGGATTCCTGCTCTGGACATGGAGGCCTGCTCTTCTCCATAA s panTro5.chr7_NW_015973501v1_random 6570 51 - 19153 TTCCACTTTCGGATTCCTGCTCTGGACATGGAGGCCTGCTCTTCTCCATAA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69617 51 - 432965 TTCCACTTTCGGATTCCTGCTCTGGACATGGAGGCCTGCTCTTCTCCATAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125742 51 + 85365473 TTCCACGTTCAGATTCCTGCTCTGGACACGGAGGCCTGCTCTTCTCCATAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33977287 51 + 185818997 TTCCACTTTCAGATTCCTGTTCTGGACATGGAGGCCTGCTTTTCTCCATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593624 51 + 192294377 TTCCACTTTCAGATTCCTGTTCTGGACATGGAGGCCTGCTTTTCTCCATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354881 51 - 9440265 TTCCACTTTCAGATTCCTGTTCTGGACATGGAGGCCTGCTTTTCTCCATAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947611 51 - 21915920 ATCCACTTTCAGATTCCTGTTCTGGACATGGAGGCCTGCTTTTCTCCATAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83644 51 - 21531802 TTCCACTTTCAGATTCCTGCTCTGGACATGGAGGCCTGCTTTTCTCCATAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 108095 51 - 2515279 TTCCACTTTCAGATTCCTGTTCTGGACATGGAGGCCTGCTTTTCTCCATAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263422 51 + 6586416 TTCCACTTTCAGATTCCTGCTCTGGACATGGAGGCCTGCCTTTCTCCATAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650811 51 - 204313951 TTTCACCTTCAGATTCCTGCTCTGGACATGGAGGACTGCTCTTCTCCATAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339033 51 - 2409723 TTCCAACTTCAGATTCCTGCTCTGGACATGGAGACCTGCTCTTCTCCATAA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473757 51 - 2125214 TTCCACCTTCAGATCCCTGCTCTGGACCTGGAGACCTGCTCTTCTCCATAA i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2205141 4436 - 8137123 I e canFam3.chr6 61012632 1729 - 77573801 I e aotNan1.NW_018514293v1 67947 478 + 376347 I a score=26400.000000 s hg38.chr7_KI270899v1_alt 108440 4 + 190869 GCCC s panTro5.chr7_NW_015973501v1_random 6621 4 - 19153 GCCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69668 4 - 432965 GCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125793 4 + 85365473 GCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33977338 4 + 185818997 GCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593675 4 + 192294377 GCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354932 4 - 9440265 GCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947662 4 - 21915920 GCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83695 4 - 21531802 GCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 108146 4 - 2515279 GCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263473 4 + 6586416 GCCC i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 473808 4 - 2125214 GCCC i cebCap1.NW_016107703v1 C 0 I 32 e otoGar3.GL873611 2205141 4436 - 8137123 I e canFam3.chr6 61012632 1729 - 77573801 I e aotNan1.NW_018514293v1 67947 478 + 376347 I e saiBol1.JH378296 339084 0 - 2409723 C e calJac3.chr2 146650862 0 - 204313951 C a score=287089.000000 s hg38.chr7_KI270899v1_alt 108444 68 + 190869 TCTCCCTTCCTTCAACGTCCTC-GGGAAAAAGCG-AAGCAGACCCTTTTCCCTCCCTCGCCCTCCTTGC-C s panTro5.chr7_NW_015973501v1_random 6625 68 - 19153 TCTCCCTTCCTTCAACGTCCTC-GGGAAAAAGCG-AAGCAGACCCTTTTCCCTCCCTCACCCTCCTTGC-C i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69672 70 - 432965 TCTCCCTTCCTTCAACGTCCTCAGGGAAAAAGCGAAAGCAGACCCTTTTCCCTCCCTCGCCCTCCTTGC-C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125797 68 + 85365473 CCTCCCTTCCTTCAACGTCTTC-AGGAAAAAGCG-AAGCAGATCCTTTTCCCTCCCTCGCCCTCCTTGC-C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33977342 67 + 185818997 TCTCCCTTCCTTCAGTGTCCTC-AGCAAAAAGCA-AAGCAGACCCTTTTCCCTACCCCGCCCTCCTTGC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593679 67 + 192294377 TCTCCCTTCCTTCAGTGTCCTC-AGCAAAAAGCA-AAGCAGACCCTTTTCCCTACCCCGCCCTCCTTGC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4354936 67 - 9440265 TCTCCCTTCCTTCAGTGTCCTC-AGCAAAAAGCA-AAGCAGACCCTTTTCCCTACCCCGCCCTCCTTGC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947666 67 - 21915920 TCTCCCTTCCTTCAATGTCCTC-AGCAAAAAGTG-AAGCAGACCCTTTTCCCTACCCCGCCCTCCTTGC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 83699 68 - 21531802 TCTTCCTTCCTTCAATGTCCTC-AGGAAAAAGCG-AAGCAGACCCTTTTCCCTCCCCCGCCCTCCTTGCC- i chlSab2.chr28 C 0 I 16 s manLeu1.NW_012101810v1 108150 67 - 2515279 TCTCCCTTCCTTCAATGTCCTC-AGCAAAAAGTG-AAGCAGACCCTTTTCCCTACCCCGCCCTCCTTGC-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263477 67 + 6586416 TCTCCCTTCCTTCAACGTCCTC-AGGAAAAAGCG-AAGCAGATCCTTTTCCCTCCCCGACCCTCCTTGC-- i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2205141 4436 - 8137123 I e canFam3.chr6 61012632 1729 - 77573801 I e aotNan1.NW_018514293v1 67947 478 + 376347 I e saiBol1.JH378296 339084 0 - 2409723 C e cebCap1.NW_016107703v1 473812 32 - 2125214 I e calJac3.chr2 146650862 0 - 204313951 C a score=46312.000000 s hg38.chr7_KI270899v1_alt 108512 26 + 190869 CTCCACAGGGGCTCTTTCCCATAACC s panTro5.chr7_NW_015973501v1_random 6693 26 - 19153 CTCCACAGGGGCTCTTTCCCATAACC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69742 26 - 432965 CTCCACAGGGGCTCTTTCCCATAACC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125865 26 + 85365473 CTCCACGGGGGCCCTTTCCCGTAACC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33977409 17 + 185818997 CTTCGCAGAGACTCTTT--------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593746 17 + 192294377 CTTCGCAGAGACTCTTT--------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355003 17 - 9440265 CTTCGCAGAGACTCTTT--------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947733 17 - 21915920 CTTCGCAGAGACTCTTT--------- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 108217 17 - 2515279 CTTCGCAGAGACTCTTT--------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263544 17 + 6586416 CTTTGCAGAGGCTCTTT--------- i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2205141 4436 - 8137123 I e canFam3.chr6 61012632 1729 - 77573801 I e chlSab2.chr28 83767 16 - 21531802 I e aotNan1.NW_018514293v1 67947 478 + 376347 I e saiBol1.JH378296 339084 0 - 2409723 C e cebCap1.NW_016107703v1 473812 32 - 2125214 I e calJac3.chr2 146650862 0 - 204313951 C a score=168144.000000 s hg38.chr7_KI270899v1_alt 108538 33 + 190869 TGCTGGCTGGTCTCTGTGGCTGAGTTCTGCCCA s panTro5.chr7_NW_015973501v1_random 6719 33 - 19153 TGCTGGCTGGTCTCTGTGGCTGAGTTCTGCCCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69768 33 - 432965 TGCTGGCTGGTCTCTGTGGCTGAGTTCTGCCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125891 33 + 85365473 TGCTGACTGGTCTCTGTGGCTGAGTTCTGCCCA i nomLeu3.chr20 C 0 I 57 s rheMac8.chr3 33977426 33 + 185818997 TGCTGACTGGTCTCTGTGGCTGAGCTCTGCCCA i rheMac8.chr3 C 0 I 96 s macFas5.chr3 33593763 33 + 192294377 TGCTGACTGGTCTCTGTGGCTGAGCTCTGCCCA i macFas5.chr3 C 0 I 96 s macNem1.NW_012019910v1 4355020 33 - 9440265 TGCTGACTGGTCTCTGTGGCTGAGTTCTGCCCA i macNem1.NW_012019910v1 C 0 I 96 s cerAty1.NW_012002954v1 16947750 33 - 21915920 TGCTGACTGGTCTCTGTGGCTGAGCTCTGCCCA i cerAty1.NW_012002954v1 C 0 I 100 s chlSab2.chr28 83783 33 - 21531802 TGCTGACTGGTCTCTGTGGCTGAGCTCTGCCCA i chlSab2.chr28 I 16 I 95 s manLeu1.NW_012101810v1 108234 33 - 2515279 TGCTGACTGGTCTCTGTGGCTGAGCTCTGCCCA i manLeu1.NW_012101810v1 C 0 I 96 s colAng1.NW_012117710v1 263561 33 + 6586416 TGCTGACTGGTCTCTGTGGCTGAGCTCTGCCCA i colAng1.NW_012117710v1 C 0 I 54 e otoGar3.GL873611 2205141 4436 - 8137123 I e canFam3.chr6 61012632 1729 - 77573801 I e aotNan1.NW_018514293v1 67947 478 + 376347 I e saiBol1.JH378296 339084 0 - 2409723 C e cebCap1.NW_016107703v1 473812 32 - 2125214 I e calJac3.chr2 146650862 0 - 204313951 C a score=16092.000000 s hg38.chr7_KI270899v1_alt 108571 4 + 190869 TCCA s panTro5.chr7_NW_015973501v1_random 6752 4 - 19153 TCCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69801 4 - 432965 TCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125981 4 + 85365473 TCCA i nomLeu3.chr20 I 57 C 0 s rheMac8.chr3 33977555 4 + 185818997 TCCA i rheMac8.chr3 I 96 C 0 s macFas5.chr3 33593892 4 + 192294377 TCCA i macFas5.chr3 I 96 C 0 s macNem1.NW_012019910v1 4355149 4 - 9440265 TCCA i macNem1.NW_012019910v1 I 96 C 0 s chlSab2.chr28 83911 4 - 21531802 TCCA i chlSab2.chr28 I 95 C 0 s manLeu1.NW_012101810v1 108363 4 - 2515279 TCCA i manLeu1.NW_012101810v1 I 96 C 0 s colAng1.NW_012117710v1 263648 4 + 6586416 TCCG i colAng1.NW_012117710v1 I 54 C 0 e otoGar3.GL873611 2205141 4436 - 8137123 I e canFam3.chr6 61012632 1729 - 77573801 I e cerAty1.NW_012002954v1 16947783 100 - 21915920 I e aotNan1.NW_018514293v1 67947 478 + 376347 I e saiBol1.JH378296 339084 0 - 2409723 C e cebCap1.NW_016107703v1 473812 32 - 2125214 I e calJac3.chr2 146650862 0 - 204313951 C a score=1421145.000000 s hg38.chr7_KI270899v1_alt 108575 325 + 190869 GGAATGGACTCA--------------------------------------------CCAGTGTCCCGGTCCAGCCCCATCTCCCCTCCACACTCAGGAGCTCCTCGGGTGAACTCGGTGCTAGCCAGGCACTCAGCACCAGGCTCGCAGGCTTCTTCCCAACACCTCCAGCCTGTGCCCCACCTGCACCCACACCCATCATTCTGCTCCGGGCTCTGCCCCGAGG-CCCCCAGTTCCCTGAGCTCGCCCATTCTCTGGCCTTCACCCACACTATGGCCTCTGCCTGGCCTCCCTCAGCCGTGTGGACGCCTCCTCTCAGCATCTAGGATCTAGGCCCATCTCCACGCCGTCTCAAAGACGCTGGGCTGCT s panTro5.chr7_NW_015973501v1_random 6756 325 - 19153 GGAATGGACTCA--------------------------------------------CCAGTGTCCCAGTCCAGCCCCATCTCCCCTCCACACTCAGGAGCTCCTCGGGTGAACTCGGTGCTGGCCAGGCACTCAGCACCAGCCTCGCAGGCTTCTTCCCAAGACCTCCAGCCTGTGCCCCACCTGCACCCACACCCATCATTCTGCTCCGGGCTCTGCCCAGAGG-CCCCCAGTTCCCTGAGCTCGCCCATTCTCTGGCCTTCACCCACACTATGGCCTCTGCCTGGCCTGCCTCAGCCGTGTGGATGCCTCCTCTCAGCATCTAGGATCTAGGCCCATCTCCACGCCGCCTCAAAGATGCTGGGCTGCT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 69805 362 - 432965 GGAATGGACTCACCAGTGTCCGGGAATGGGCTCGCTGGCATCCAGGAACGGGCTTCCCAGTGTCCCGGTCGAGCCCCATCTCCCCTCCACACTCAGGAGCTCCTCGGGTGAACTCGGTGCTGGCCAGGCACTCAGCACCAGCCTCGCAGGCTTCTTCCCAACACCTCCAGCCTGTGCCCCACCTGCACCCACACCCATCATTCTGCTCCGGGCTCTGCCCAGAGG-CCCCCAGTTCCCTGAGCTCGCCCATTCTCTGGCCTTCACCCACACTATGGCCTCTGCCTGGCCTGCCTCAGCCGTGTGGACGCCTCCTCTCAGC-------ATCTAGGCCCATCTCCACGCCGTCTCAAAGACGCTGGGCTGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 125985 363 + 85365473 GGAATGGACTCACCAGTGTCCGGGAATGGGCTCACCGGTATCCAGGAACGCGCTCCCCAGCGTCCCGGTCCAGCCCCATCTCCCCTCCGCACTCAGGGGCTCCTCTGGTGAACTTAGTGCTGGCCGGGCACTCAGCACCAGCCTCACAGGCTTCTTCCCGACACCTCCAGTCTGTGCCCCACCTGCACCCACACCCATCGTTCTGCTCCGGGCTCTGCCCGGGGGCCCCCCAGTTCCCTGAGCTCGCCCGTTCTCTGGCCTTCACTCGCACTATGGCCTCTGCCTGGCCTGCCTCAGCCGTGTGGGCGCCTCCTCTCAGC-------ATCTAGGCCCATCTCCACGCCGTCTCCAAGACGCTGGGCTGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33977559 318 + 185818997 GGAATGGGCTC--------------------------------------------CCCAGTGTCCCGATCCAGCCCCCACTCCCCTCCGCACTCAGGGGCTTCTCTGGTGAACACGGTCCTGGCCAGCCACTCAGCACCAGCCTCACAGGCTTCTTCCCGACACCTCCAGCCCGTGCCCCACCTGCACCCACACCCATCATTCTGCTCCGGGCTCTGCCCAGAGG-CCCCCAATTCCCTGAGCTTGCCCGTTCCCCGTCCTTCACCCACAGTATGGCCTCTGCCTGGCCTGCCTCAGCCATGTGGACACCTCCTCTCAGC-------ATCTAGGCCCATCTCCACACCATCTCCGAGATGCTACACTGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33593896 318 + 192294377 GGAATGGGCTC--------------------------------------------CCCAGTGTCCCGATCCAGCCCCCACTCCCCTCCGCACTCAGGGGCTTCTCTGGTGAACACGGTCCTGGCCAGCCACTCAGCACCAGCCTCACAGGCTTCTTCCCGACACCTCCAGCCCGTGCCCCACCTGCACCCACACCCATCATTCTGCTCCGGGCTCTGCCCAGAGG-CCCCCAATTCCCTGAGCTTGCCCGTTCCCCGTCCTTCACCCACAGTATGGCCTCTGCCTGGCCTGCCTCAGCCATGTGGACACCTCCTCTCAGC-------ATCTAGGCCCATCTCCACGCCGTCTCCGAGATGCTGCACTGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355153 318 - 9440265 GGAATGGGCTC--------------------------------------------CCCAGTGTCCCGATCCAGCCCCCACTCCCCTCCGCACTCAGGGGCTTCTCTGGTGAACACGGTCCTGGCCAGCCACTCAGCACCAGCCTCACAGGCTTCTTCCCGACACCTCCAGCCCGTGCCCCACCTGCACCCACACCCATCATTCTGCTCCGGGCTCTGCCCAGAGG-CCCCCAGTTCCCTGAGCTTGCCCGTTCCCCGTCCTTCACCCACAGTATGGCCTCTGCCTGGCCTGCCTCAGCCATGTGGACACCTCCTCTCAGC-------ATCTAGGCCCATCTCCACGCCGTCTCCAAGATGCTGCACTGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16947883 318 - 21915920 GGAATGGGCTC--------------------------------------------CCCAGTGTCCCGGTCCAGCCCCCACTCCCCTCCGCACTCAGGGGCTTCTCTGGTGAACACGGTCCTGGCCAGCCACTCAGCACCAGCCTCACAGGCTTCTTCCCGACACCTCCAGCCCGTGCCCCACCTGCACCCACACCCATCATTCTGCTCCGGGCTCTGCCCAGAGG-CCCCCAGTTCCCTGAGCTTGCCCGTTCCCCGTCCTTTACCCACACTATGGCTTCTGCCTGGCCTGCCTCAGCCATATGGATGCCTCCTCTCAGC-------ATCTAGGCCCATCTCCACGCCATCTCCTAGATGCCGCACTGCT i cerAty1.NW_012002954v1 I 100 C 0 s chlSab2.chr28 83915 316 - 21531802 GGAACGGACTC--------------------------------------------CCCAGTGTTCTGGTCCAGCCCCCACTCCCCTCCGCACTCAGGGGCTTCTCTGGTGAACACGGTCCTGGCCAGACACTCAGCACCAGCCTCACAGGCTTCTTCCCGACACCTCCAGCCCGTGCCCCACCTGCGCCCACACCCATCGTTCTGCTCTGGGCTCTGCCCAGAGG-CCCCCAGTT-CCTGAGCATGCCCGTTCCCCAGCTTTCACCCACACTATGGCCTCTGCCTGGCCTGCCTCAGCCATGTGGATGCCTCCTGTCAGC-------ATCTAGGCCCATCTCCACGCCGTCTCCACGATGCTGCACTGC- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 108367 318 - 2515279 GGAATGGGCTC--------------------------------------------CCCAGTGTCCCGGTCCAGCCCCCACTCCCCTCCGCACTCAGGGGCTTCTCTGGTGAACACGGTCCTGGCCAGCCACTCAGCACCAGCCTCACAGGCTTCTTCCCGACACCTCCAGCCCGTGCCCCACCTGCACCCACACCCATCATTCTGCTCCGGGCTCTGCCCAGAGG-CCCCCAGTTCCCTGAGCTTGCCCGTTCCCCGTCCTTCACCCACACTATGGCCTCTGCCTGGCCTGCCTCAGCCATGTGGATGCCTCCTCTCAGC-------ATCTAGGCCCATCTCCACGCCATCTTCTAGATGCTGCACTGCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263652 337 + 6586416 GGAATGGACTCACCAGTGTCCAGGAATGGGCT-----------------------CCCAGTGTCCCGGTCCAGCCCCCACTCCCCTCCGCACTCCGGGGCTTCTCTGGTGAACACGGTCCCAGCCAGCCACCCAGCACCAGCCTCACAGGCTTCTTCCCGACACCTCCAGCCCATGCCCCACCTGTGCCCACACCCATCATTCTGCTCCGGGCTCTGCCCAGAGG-CCCCC-GTTCCCTGAGCTTGCCTGTTCCCCGGCCTTCACCCACACTATGGCCTCTGCCTGGCCTGCCTCAACCATGTGGATGCCTCCTCTCAGC-------ATCTAGGCCCATCTCCGCGCCGTCTCCGAGATGCTGTGCTGC- i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2205141 4436 - 8137123 I e canFam3.chr6 61012632 1729 - 77573801 I e aotNan1.NW_018514293v1 67947 478 + 376347 I e saiBol1.JH378296 339084 0 - 2409723 C e cebCap1.NW_016107703v1 473812 32 - 2125214 I e calJac3.chr2 146650862 0 - 204313951 C a score=127208.000000 s hg38.chr7_KI270899v1_alt 108900 34 + 190869 GCCCACTGTGAGACAGGAGCC-CCCTCTCTGTTCC- s panTro5.chr7_NW_015973501v1_random 7081 34 - 19153 GCCCACTGTGAGATAGGAGCC-CCCTCTCTGTTCC- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70167 33 - 432965 GCCCGCTGTGAGATAGGAG-C-CCCTCTCTGTTCT- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126348 34 + 85365473 GCCCACTGTGAGGTAGGAGCC-CCCTCTCTGTTCC- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33977877 31 + 185818997 GTCCACTGTGAAATCCGAG----CCTCTCTGTTCT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594214 31 + 192294377 GTCCACTGTGAAATCCGAG----CCTCTCTGTTCT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355471 31 - 9440265 GTCCACTGTGAAATCCGAG----CCTCTCTGTTCT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948201 31 - 21915920 GTCCACCGTGAAATCCGAG----CCTCTCTGTTCT- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84231 29 - 21531802 --CCACTGTGAAATCCAAG----CCTCTCTGTTCT- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 108685 31 - 2515279 GTCCACTGTGAAATCCAAG----CCTCTCTGTTCT- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 263989 29 + 6586416 --CCACTGTGAAATCCGAG----CCTCTCTGTTCT- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650862 36 - 204313951 GCCCACTTTTAGATAGAAGCCTTACTCTCTGTTTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339084 36 - 2409723 GCCCACTTTGAGATAGGAGCCTTCCTCTCTGTTTCT i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2205141 4436 - 8137123 I e canFam3.chr6 61012632 1729 - 77573801 I e aotNan1.NW_018514293v1 67947 478 + 376347 I e cebCap1.NW_016107703v1 473812 32 - 2125214 I a score=918321.000000 s hg38.chr7_KI270899v1_alt 108934 165 + 190869 ACACCACCCTTGACAGGCACTTACCAGGCCCGTCCACCTCATCTGGTGGGTCGTGTCCGTCCTTTCATCAGATAGCAAGTCCCTCAAGGCCC------AACTCCCTGAGCCCCCATCCCCCTCTTTGTCTCTCCTCCAGGGATTAGTGTCACCCCTGATCCCACTC-------------------------C-----GGCT s panTro5.chr7_NW_015973501v1_random 7115 190 - 19153 ACACCACCCTTGACAGACACTTACCAGGCCCGTCCACCTCATCTGGTGGGTCGTGTCCGTCCTTTCATCAGATAGCAAGTCCCTCAAGGCCC------AACTCCCTGAGCCCCCATCCCCCTCTTTGTCTCTCCTCCAGGGATTAGTGTCACCCCTGATCCCACTCATGTTGCAACCCCTACTCCACTCTTG-----GCCT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70200 163 - 432965 ACACCACCCTTGACAGGCACTTACCAGG-CCGTCCACCTCATCTGGTGGGTCGTGTCCGTCCTTTCATCAGATAGCAAGTCCCTCAAGGCCC------AACTCCCTGAG-CCCCATCCCCCTCTTTGTCTCTCCTCCAGGGATTAGTGTCACCCCTGATCCCACTC-------------------------C-----GGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126382 136 + 85365473 ACACCACCCTTGACAGGCACTTACCAGGCCCCTCCGCCTCATCTGGTGG-----------------------------GTCCCTCAAGGCCC------ATCTCCCTGAGCCCCCGTCCCCCTCTTTGTCTCTCCACCAGGGATTAGTGTCACCCCCGAACCCACTC-------------------------C-----GGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33977908 150 + 185818997 ACACCACCCTCGACAGGCACTTACCAGGCCCCTCTGTCTCATCTG--------------TCCTTTCATCAGATACTAAGTCCCTCAAAGCCC------ATCTCCCTGACCCCCTGTCCCCCTCTTTGTCTCTCCAGCAAGGGTTAGTGTCGCCCCCGACCCC-CTC-------------------------C-----GGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594245 150 + 192294377 ACACCACCCTCGACAGGCACTTACCAGGCCCCTCTGTCTCATCTG--------------TCCTTTCATCAGATACTAAGTCCCTCAAAGCCC------ATCTCCCTGACCCCCTGTCCCCCTCTTTGTCTCTCTAGCAAGGGTTAGTGTCGCCCCCGACCCC-CTC-------------------------C-----GGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355502 150 - 9440265 ACACCACCCTCGACAGGCACTTACCAGGCCCCTCTGTCTCATCTG--------------TCCTTTCATCAGATACTAAGTCCCTCAAAGCCC------ATCTCCCTGACCCCCTGTCCCCCTCTTTGTCTCTCCAGCAGGGGTTAGTGTCGCCCCCGACCCC-CTC-------------------------C-----GGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948232 150 - 21915920 ACACCACCCCCGACAGGCACTTACCAGGCCCCTCTGTCTCATTTG--------------TCCTTTCATCAGATACTAAGTCCCTCGAGGCCC------ATCTCCCTGACCCCCTGTCCCCCTCTTTGTCTCTCCAGCAGGGGTTAGTGTCGTCCCCGACCCC-CTC-------------------------C-----GGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84260 148 - 21531802 ACACCACCCTCGACAGGCACTTACCAGGCCCCTCTGTCTCATCTG--------------TCCTTTCATCAGACACTAAGTCCCTCGAGGCCC------ATCTCCCTGACCCC--GTCCCCCTCTTTGTCTCTCCACCAGGGGTTAGTGTCGCCCCCGACCCC-CTC-------------------------C-----AGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 108716 150 - 2515279 ACACCACCCTCGACAGGCACTTACCAGGCCCCTCTGTCTCATTTG--------------TCCTTTCATCAGATACCAAGTCCCTCGAGGCCC------ATCTCCCTGACCCCCTGTCCCCCTCTTTGTCTCTCCAGCAGGGGTTAGTGTCGCCCCCGACCCC-CTC-------------------------C-----GGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264018 153 + 6586416 ATACCACCCTCGACAGGCACTTACCAGGCCCGTCTGTCTCATCTG--------------TCCTTTCATCAGATACTAAGTCCCTCGAGGCCC------GTCTCCCTGAACCC-TGT-CCCCTCTTTGTCTCTCCACCAGGGGTTAGTGTCACCCCCGACCCC-CTC-------------------------CGGCCTGGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146650898 170 - 204313951 ACACCACCCTTGACAGGCATTTACCAGGCCCCTCTGCCTCATCTGGTGGGTCATGTCCATCCTTTCATCAGATACTAAGTCCCTCGAGGCCCCTGCCAGGCTCCCTGACCCCCTGTCCCCCTCCTTGTCTCTTCACCAGGCATCAGTGTCA-CCCAGATCCTGCTC-------------------------T-----GGTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339120 170 - 2409723 ACACCGCCCTTAACAGGCACTTACCAGGCCCCTCTGCCTCATCTCATAGGTCATGTCCACTCTTTCATCAGATACTAAGTCCCTGGAGACCCCTGCCAGTCTCCTTGA-CCCCTGTCCCTCTTCTTGTCTCTTCACCAGGGATCAGTGTCACCCCCAATCCTGCTC-------------------------T-----GGCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 473844 168 - 2125214 ACACCGCCCCTGACAGGCATTTACCAGGCCCCTCTGCTTCATCTCGTGGGCTATGTCCATCCTTTCATCAGATACTAAGTCCCTCGAGGCCCCTGCCAGTCTCCCTGA-CCCCTGTCCCTC--CTTGTCTCTTCACCAGGGATCAGTATCACCCCCAATCCTGCTC-------------------------T-----GGCC i cebCap1.NW_016107703v1 I 32 C 0 e otoGar3.GL873611 2205141 4436 - 8137123 I e canFam3.chr6 61012632 1729 - 77573801 I e aotNan1.NW_018514293v1 67947 478 + 376347 I a score=258508.000000 s hg38.chr7_KI270899v1_alt 109099 38 + 190869 TGGCCTCA-CCCACAA-CAGCTGGCAC--CCACCTTGGCCCT s panTro5.chr7_NW_015973501v1_random 7305 40 - 19153 TGGCCTCATCCCACAAGCAGCTGGCACGGCCACCT--GGCCT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70363 38 - 432965 TGGCCTCT-CCCACAA-CAGCTGGCAC--CCACCTTGGCCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126518 38 + 85365473 TGGCGTCA-CCCACAA-CAGCTGGAGC--CCACCTTGGCCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978058 38 + 185818997 TGGCCTCA-CCCACAG-CAGCTGGCGC--CCACGTTGGCAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594395 38 + 192294377 TGGCCTCA-CCCACAG-CAGCTGGCGC--CCACGTTGGCAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355652 38 - 9440265 TGGCCTCA-CCCACAG-CAGCTGGCGC--CCACGTTGGCCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948382 38 - 21915920 TGGCCTCA-CCCACAG-CAGCTGGCGC--CCACCTTGGCCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84408 35 - 21531802 TGGCCTCG-CCCA----CAGCTGGACC--CCACCTTGGCCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 108866 38 - 2515279 TGGCCTCA-CCCACAG-CAGCTGGTGC--CCACCTTGGCCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264171 38 + 6586416 TGGCCTCA-CCCACAG-CAGCTGGCGC--CCACATTGGCCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651068 38 - 204313951 TGGCCTCA-CCCACAG-CAGCTGGCGC--CTGCCTTGACCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339290 38 - 2409723 TGGCCTCA-CCCACAG-CAGCTGGTGC--CTGCCTTGACCCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474012 38 - 2125214 TGGCCTCA-CCCACAG-CAGCTGGCGC--CTGCCTTGACCCT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2209577 38 - 8137123 TGGCCTCC-CTCACAG-CAGCTGCGAC--CTGACCAGGGCTT i otoGar3.GL873611 I 4436 C 0 e canFam3.chr6 61012632 1729 - 77573801 I e aotNan1.NW_018514293v1 67947 478 + 376347 I a score=259450.000000 s hg38.chr7_KI270899v1_alt 109137 31 + 190869 CCTGG-CTG-T-GGCCTTGAC-CCCTGGTGTTCAT s panTro5.chr7_NW_015973501v1_random 7345 34 - 19153 CCTGGCCTGTT-GGCCTTGACACCCTGGTGTTCAT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70401 31 - 432965 CCTGG-CTG-T-GGCCTTGAC-CCCTGGTGTTCAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126556 31 + 85365473 CCTGG-CTG-T-GGCCTTGAC-CCCTGGTGTTCAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978096 31 + 185818997 CCCGG-CTG-T-GGCCTTGAC-CCCTTGTGTCCGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594433 31 + 192294377 CCCGG-CTG-T-GGCCTTGAC-CCCTCGTGTCCGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355690 31 - 9440265 CCCGG-CTG-T-GGCCTTGAC-CCCTCGTGTCCGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948420 31 - 21915920 CCTGG-CTG-T-GGCCCTGAC-CCCTCGTGTCCGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84443 31 - 21531802 CCCGG-CTG-T-GGCCTTGAC-CTTTCGTGTCCGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 108904 31 - 2515279 CCTGG-CTG-T-GGCCTTGAC-CCCTCGTGTCCGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264209 31 + 6586416 CCCAG-CTG-T-GGCCTTGAC-CCCCAGTGTCCAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651106 31 - 204313951 CCTGG-CTG-T-CGCCTTGAC-CCCTGGGGTTCGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339328 31 - 2409723 CCTGG-CTG-T-GGCCTTGAC-CCCTGGTGTTCGT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474050 31 - 2125214 CCTGG-CTG-T-GGCCTTGAC-CCCTAGTGTTCAT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68425 32 + 376347 CCTGG-CTG-TGGGCCTTGAC-CCCTGGTGTTCAT i aotNan1.NW_018514293v1 I 478 C 0 s otoGar3.GL873611 2209615 31 - 8137123 CCCAG-CCA-T-GGCTTTGAC-TCCTGGGGTCTTT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61012632 1729 - 77573801 I a score=168793.000000 s hg38.chr7_KI270899v1_alt 109168 27 + 190869 CCTGGCTC--AACCCCTGGCCCT---------------GGTTCT- s panTro5.chr7_NW_015973501v1_random 7379 28 - 19153 CCTGGCTTCAAATCCCTGG-CCT---------------GGTTCT- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70432 27 - 432965 CCTGGCTC--AACCCCTGGCCCT---------------GGTTCT- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126587 27 + 85365473 CCTGGCTC--AACCCCTGGCCCT---------------GGTTCT- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978127 41 + 185818997 CCT-GCTC--AGCGCCTGGCCCTGGTTCTTCTTCCCAGGGTTCT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594464 41 + 192294377 CCT-GCTC--AGCGCCTGGCCCTGGTTCTTCTTCCCAGGGTTCT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355721 41 - 9440265 CCT-GCTC--AGCGCCTGGCCCTGGTTCTTCTTCCCAGGGTTCT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948451 41 - 21915920 CCT-GCTC--AGCGCCTGGCCCTGGTTCTTCTTCCCAGGGTTCT- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84474 42 - 21531802 CCTGGCTC--AGCTCCTGGCCCTGGGTCTTCTTCCCAGGGTTCT- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 108935 41 - 2515279 CCT-GCTC--AGCGCCTGCCCCTGGTTCTTCTTCCCAGGGTTCT- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264240 42 + 6586416 CCTGGCTC--AGCCCCTGGCTCTGGTTCTCCTTCCCAGGGTTCT- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651137 26 - 204313951 CCTGGCTC--AGCCCC-AGCCCT---------------GGTTCT- i calJac3.chr2 C 0 I 15 s saiBol1.JH378296 339359 27 - 2409723 CCTGGCTC--AGCCCCTGGCCCT---------------GGTTCT- i saiBol1.JH378296 C 0 I 15 s cebCap1.NW_016107703v1 474081 27 - 2125214 CCTGGCTC--AGCCCCTGGCCCT---------------GGTTCT- i cebCap1.NW_016107703v1 C 0 I 15 s aotNan1.NW_018514293v1 68457 25 + 376347 TC-GCTTC--AGCCCT-GGCCCT---------------GGTTCT- i aotNan1.NW_018514293v1 C 0 I 58 s otoGar3.GL873611 2209646 26 - 8137123 CCTGGCTC--ATCCCC-CACCCA---------------GGTTCT- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014361 31 - 77573801 CCTGGATT--AGTCCCTGGCCCC------------TGGGCTTCTT i canFam3.chr6 I 1729 C 0 a score=273928.000000 s hg38.chr7_KI270899v1_alt 109195 42 + 190869 CTTGGTGC----------CACCT-AAACAGTCTACACTGTCTTGTGTTCAC-CT s panTro5.chr7_NW_015973501v1_random 7407 44 - 19153 CTTGGTGC----------CACCTAAAACAGTCTACACTGTCTTGTGTTCACTCT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70459 42 - 432965 CTTGGTGC----------CACCT-AAACAGTCTACACTGTCTTGTGTTCAC-CT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126614 42 + 85365473 CTTGGTGC----------CACCT-AAACAGTCTACACTGTCTTGTGTTCAT-CT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978168 41 + 185818997 CTTGGTGC----------CACCT-GAACAGTCTATACTGTCTT-TGTTCAT-CT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594505 41 + 192294377 CTTGGTGC----------CACCT-GAACAGTCTATACTGTCTT-TGTTCAT-CT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355762 41 - 9440265 CTTGGTGC----------CACCC-GAACAGTCTATACTGTCTT-TGTTCAT-CT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948492 41 - 21915920 CTTGGTGC----------CACCT-GAACAGTCTATACTGTCTT-TGTTCAT-CT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84516 41 - 21531802 CTTGGTGC----------CACCT-GAACAGTCCACACTGTCTT-TGTTCAT-CT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 108976 41 - 2515279 CTTGGTGC----------CACCT-GAACAGTCTATACTGTCTT-TGTTCAT-CT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264282 41 + 6586416 CTTGGTGC----------CACCT-GAACAGTCTATACTGTCTT-TGTTCAT-CT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651178 42 - 204313951 CTTGATGC----------CATCT-AAACAGTCTAGACTGTCTTGTGCTCAT-CT i calJac3.chr2 I 15 C 0 s saiBol1.JH378296 339401 42 - 2409723 CTTGATGC----------CATCT-CAACAGTCTAGACTGGCTTGTGCCCAT-CT i saiBol1.JH378296 I 15 C 0 s cebCap1.NW_016107703v1 474123 42 - 2125214 CCTGATGT----------TATCT-AAACAGTCTAGATTGTCTTGTGCTCAT-CT i cebCap1.NW_016107703v1 I 15 C 0 s otoGar3.GL873611 2209672 31 - 8137123 --------------------TCT-TCATGGGGGTCACTTACTC-TGCACAT-CT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014392 51 - 77573801 CCTGATGCTCTCCCAAGTCATCG-AAATAGCCCAGATTGTGTG-CACCCAT-CT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 68482 58 + 376347 I a score=319873.000000 s hg38.chr7_KI270899v1_alt 109237 38 + 190869 TTTCTTTAATTATTTGTTT-AGCAG-AGCAG-AGCTGATTT s panTro5.chr7_NW_015973501v1_random 7451 37 - 19153 TTTCTTTA--TATTTTGTT-AGCAGTAGCAGTAGCTGA-TT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70501 38 - 432965 TTTCTTTAATTATTTGTTT-AGCAG-AGCAG-AGCTGATTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126656 38 + 85365473 TTTCTTTAAATATTTGTTT-AGCAG-AGCAG-AGCTGATTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978209 37 + 185818997 TTTCTTTAAATATTTGTTT-AGCAG-AGCA--AGCTGATTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594546 37 + 192294377 TTTCTTTAAATATTTGTTT-AGCAG-AGCA--AGCTGATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355803 37 - 9440265 TTTCTTTAAATATTTGTTT-AGCAG-AGCA--AGCTGATTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948533 37 - 21915920 TTTCTTTAAATATTTGTTT-AGCAG-AGCG--AGCTGATTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84557 37 - 21531802 TTTCTTTAAATATTCGTTT-AGCAG-AGCA--AGCTGATTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109017 37 - 2515279 TTTCTTTAAATATTTGTTT-AGCAG-AGCG--AGCTGATTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264323 37 + 6586416 TTTCTTTAAATATTTGTTT-AGCAG-AGCG--AGCTGATTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651220 38 - 204313951 TTTCTCTAAATATTTGTTT-AGCAG-AGCAG-AGCTGATTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339443 38 - 2409723 TTTCTCTAAATACTTGTTT-AGCAG-AGCAG-AACTCATTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474165 38 - 2125214 TTTCTCTAAATATTTGTTT-AGCAG-AGCAG-AGCCGATTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68540 38 + 376347 TTTCTCTAAATATTTGTTT-AGCAG-AGCAG-AGCTGATTT i aotNan1.NW_018514293v1 I 58 C 0 s otoGar3.GL873611 2209703 38 - 8137123 TTTCTATGAATATTGTTTTGAGCAG-AGTAG-CAGTGTTT- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014443 33 - 77573801 TTTCTTTAAATATTTTTTG-AGCAG-------AGCTGATTT i canFam3.chr6 C 0 C 0 a score=18630.000000 s hg38.chr7_KI270899v1_alt 109275 2 + 190869 TA s panTro5.chr7_NW_015973501v1_random 7488 2 - 19153 TA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70539 2 - 432965 TA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126694 2 + 85365473 TA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978246 2 + 185818997 TA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594583 2 + 192294377 TA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355840 2 - 9440265 TA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948570 2 - 21915920 TA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84594 2 - 21531802 TA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109054 2 - 2515279 TA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264360 2 + 6586416 TA i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 339481 2 - 2409723 TA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474203 2 - 2125214 AA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68578 2 + 376347 TA i aotNan1.NW_018514293v1 C 0 I 27 s otoGar3.GL873611 2209741 2 - 8137123 TA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014476 2 - 77573801 TA i canFam3.chr6 C 0 C 0 e calJac3.chr2 146651258 0 - 204313951 C a score=78180.000000 s hg38.chr7_KI270899v1_alt 109277 11 + 190869 CAAatata-aat s panTro5.chr7_NW_015973501v1_random 7490 12 - 19153 CAAATATATAAT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70541 11 - 432965 CAAATATA-AAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126696 11 + 85365473 CAAATATA-AAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978248 11 + 185818997 AAAATATA-AAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594585 11 + 192294377 AAAATATA-AAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355842 11 - 9440265 AAAATATA-AAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948572 11 - 21915920 AAAATATA-AAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84596 11 - 21531802 AAAATATA-AAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109056 11 - 2515279 AAAATATA-TAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264362 11 + 6586416 AAAacata-aat i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 339483 11 - 2409723 AAAATATA-AAT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474205 11 - 2125214 AAAATATA-AAT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2209743 11 - 8137123 AAAACAGA-AAT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014478 11 - 77573801 AAAACATA-AGT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 68580 27 + 376347 I e calJac3.chr2 146651258 0 - 204313951 C a score=7397.000000 s hg38.chr7_KI270899v1_alt 109288 1 + 190869 c s panTro5.chr7_NW_015973501v1_random 7502 1 - 19153 C i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70552 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126707 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978259 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594596 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355853 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948583 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84607 1 - 21531802 C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109067 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264373 1 + 6586416 c i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 339494 1 - 2409723 C i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474216 1 - 2125214 C i cebCap1.NW_016107703v1 C 0 I 6 s otoGar3.GL873611 2209754 1 - 8137123 C i otoGar3.GL873611 C 0 I 9 e canFam3.chr6 61014489 0 - 77573801 C e aotNan1.NW_018514293v1 68580 27 + 376347 I e calJac3.chr2 146651258 0 - 204313951 C a score=1122345.000000 s hg38.chr7_KI270899v1_alt 109289 277 + 190869 cg--------ccggg--cgtgctgg-ctcac-ccctgtaatcccagcactt-ccggaggccga-gatggg-tggatcatgaggtc-ag-gagttcgagacc---agcctgaccaacatggtgaaacactgtct-ctac-taaaatt-acaaaaat--tagccaggcgtg-gtgg-cgcgcgcctat--aatcc--cagcta--ctcaggaggctgaggcaggagaatcacttgaatc-caggaggcggaggttgcagtgagctga-gat-cacgccatt-gta--ctccagcctgggccacagagcaagactc-tgt s panTro5.chr7_NW_015973501v1_random 7503 314 - 19153 GGACGTTTTCCCGGGGATGTCCTGGCctcacaccctgtacatccagcacttcccggaggccgacgatgggttggatcatgaggtctagcgagttcgagaggcgaagcctgaccaacatggtgaaacactgtctgctacttaaaaat-acaaaaattctagacaggcgtgcgtggccggacgcctatgagatccaacagctactctcaggagg-tgaggcaggagaatcacttgaatcacaggaggcgaggttggcagtgagctgacgatccacgccattcgtacgctccag-ctgggcatcagagcaagactcgtgt i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70553 277 - 432965 gg--------ccggg--cgtgctgg-ttcac-ccctgtaatcccagcactt-ccggaggccga-gatggg-tggatcatgaggtc-ag-gggttcgagacc---agcctgatcaacatggtgaaatgctgtct-ctac-taaaaat-acaaaaat--tagccaggcgtg-gtgg-tgcgcgcctat--aatcc--cagcta--ctcaggaggctgaggcaggagaatcacttgaatc-caggaggcggaggttgcagtgggctga-gat-cacaccact-gta--ctccagcctgggccacagagcaagaccc-tgc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126708 277 + 85365473 gg--------ccggg--cgcagtgg-ctcgc-ccctgtaatcccagcactt-cgggaggccga-gatggg-tggatcatgaggtc-ag-gagttcgagacc---agcctgaccaacacggtgaaacgctgttt-ctac-taaaaat-acaaaaat--tagccgggtgtg-gtgg-ctcgcgcctgt--aatcc--cagcta--ctcaggaggctgaggcaggagaatcacttgaatc-caggaggcggaggttgcagtgagctga-gat-catgccatt-gta--ccccagcatgggccacagagaaagactc-tgt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978260 278 + 185818997 gg--------ccggg--cgcggtgg-ctcac-acctgtaatcccagcacgt-cgggaggctga-gttggg-tggatcatgaagtc-ag-gagttcgagacc---agcccgacctacatggtgaaaccctgtct-ctac-taaaaataacaaaaac--tagccgggcgtg-gtgg-caggcgcctgt--aatcc--cagcta--ctcaggaggctgaggcaggagaatcgcttgaacc-caggaggcggaggttgcagtgagtcaa-gat-catgccatt-gta--ctccagcctgggccacggggcaagactg-tgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594597 278 + 192294377 gg--------ccggg--cgcggtgg-ctcac-acctgtaatcccagcacgt-cgggaggctga-gttggg-tggatcatgaagtc-ag-gagttcgagacc---agcccgacctacatggtgaaaccctgtct-ctac-taaaaataacaaaaac--tagccgggcgtg-gtgg-caggtgcctgt--aatcc--cagcta--ctcaggaggctgaggcaggagaatcgcttgaacc-caggaggcggaggttgcagtgagtcaa-gat-catgccatt-gta--ctccagcctgggccacagggcaagactg-tgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4355854 278 - 9440265 gg--------ccggg--cgcggtgg-ctcac-acctgtaatcccagcacgt-cgggaggctga-gttggg-tggatcatgaagtc-ag-gagttcgagacc---agcccgacctacatggtgaaaccctgtct-ctac-taaaaataacaaaaac--tagccgggcgtg-gtgg-caggtgcctgt--aatcc--cagcta--ctcaggaggctgaggcaggagaatcgcttgaacc-caggaggcggaggttgcagtgagtcaa-gat-catgccatt-gta--ctccagcctgggccacagggcaagactg-tgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948584 278 - 21915920 gg--------ccggg--cgcggtgg-ctcac-gcctgtaatcccagcacgt-cgggaggctga-gttggg-tggatcatgaagtc-ag-gagttcgagacc---agcccgacctacatggtgaaaccctgtct-ctac-taaaaataacaaaaac--tagccggggttg-gtgg-caggtgcctgt--aatcc--cagcta--ctcaggaggctgaggcaggagaatcgcttgaacc-caggaggcggaggttgcagtgagtcaa-gat-catgccatt-gta--ctccagcctgggccacagggcaagactg-tgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84608 278 - 21531802 gg--------ccagg--cgtggtgg-ctcac-gcctgtaatcccagcacgt-cgggaggctga-gatggg-tggatcatgaagtc-ag-gagttcgcgacc---agcccgacctacatggtgaaaccctgtct-ctac-taaaaataacaaaaac--tagccgggcgtg-gtgg-cccgtgcctgt--catcc--cagcta--ctcaggaggctgaggcaggagaatcgcttgaacc-caggaggcggaggttgtagtgagccaa-gat-cgcgccatt-gta--ctccagcctgggccacagggaaagactc-tgt i chlSab2.chr28 C 0 I 41 s manLeu1.NW_012101810v1 109068 278 - 2515279 gg--------ccggg--cgcggtgg-ctcac-gcctgtaattccagcacgt-cgggaggctga-gttggg-tggatcatgaagtc-ag-gagttcgagacc---agcctgacctacatggtgaaaccctgtct-ctac-taaaaataacaaaaac--tagccggggttg-gtgg-caggtgcctgt--aatcc--cagcta--ctcaggaggctgaggcaggagaatcgcttgaacc-caggacgcggaggttgcagtgagtcaa-gat-catgccatt-gta--ctccagcctgggccacagggcaagactg-tgt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264374 278 + 6586416 ag--------ccggg--cgcggtgg-ctcac-tcctggaatcccagcacgt-cggcaggctga-gatggg-tggatcatgaagtc-ag-gagatcgagacc---agcctgactaacatggtgaaaccctgtct-gtac-taaaaataacaaaaac--tagctgggcgta-gtgg-cacgtgcctgt--catcc--cagcta--ctcaggaggctgaggcaggagaatcgcttgaacc-caggaggtggaggttgcagtgagccaa-gat-catgccact-gta--ctccagcctgggccacagggcaagactc-tgt i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2209755 9 - 8137123 I e canFam3.chr6 61014489 0 - 77573801 C e aotNan1.NW_018514293v1 68580 27 + 376347 I e saiBol1.JH378296 339495 0 - 2409723 C e cebCap1.NW_016107703v1 474217 6 - 2125214 I e calJac3.chr2 146651258 0 - 204313951 C a score=-2290.000000 s hg38.chr7_KI270899v1_alt 109566 2 + 190869 gt s panTro5.chr7_NW_015973501v1_random 7817 2 - 19153 ct i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70830 2 - 432965 ct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126985 2 + 85365473 ct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978538 2 + 185818997 gt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594875 2 + 192294377 gt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356132 2 - 9440265 gt i macNem1.NW_012019910v1 C 0 I 42 s cerAty1.NW_012002954v1 16948862 2 - 21915920 gt i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 109346 1 - 2515279 g- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264652 1 + 6586416 -c i colAng1.NW_012117710v1 C 0 I 1 e otoGar3.GL873611 2209755 9 - 8137123 I e canFam3.chr6 61014489 0 - 77573801 C e chlSab2.chr28 84886 41 - 21531802 I e aotNan1.NW_018514293v1 68580 27 + 376347 I e saiBol1.JH378296 339495 0 - 2409723 C e cebCap1.NW_016107703v1 474217 6 - 2125214 I e calJac3.chr2 146651258 0 - 204313951 C a score=-4357.000000 s hg38.chr7_KI270899v1_alt 109568 7 + 190869 t--------------aaaaaa s panTro5.chr7_NW_015973501v1_random 7819 21 - 19153 ttaaaaaaaaaaaaaagaaaa i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70832 1 - 432965 t-------------------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126987 7 + 85365473 t--------------aaaaaa i nomLeu3.chr20 C 0 C 0 s cerAty1.NW_012002954v1 16948864 6 - 21915920 ---------------gtgtgt i cerAty1.NW_012002954v1 C 0 C 0 e colAng1.NW_012117710v1 264653 1 + 6586416 I e otoGar3.GL873611 2209755 9 - 8137123 I e canFam3.chr6 61014489 0 - 77573801 C e chlSab2.chr28 84886 41 - 21531802 I e manLeu1.NW_012101810v1 109347 0 - 2515279 C e macNem1.NW_012019910v1 4356134 42 - 9440265 I e macFas5.chr3 33594877 0 + 192294377 C e rheMac8.chr3 33978540 0 + 185818997 C e aotNan1.NW_018514293v1 68580 27 + 376347 I e saiBol1.JH378296 339495 0 - 2409723 C e cebCap1.NW_016107703v1 474217 6 - 2125214 I e calJac3.chr2 146651258 0 - 204313951 C a score=386.000000 s hg38.chr7_KI270899v1_alt 109575 16 + 190869 aaaaaaatatatata-------t-- s panTro5.chr7_NW_015973501v1_random 7840 23 - 19153 aaaaaaatatatatatatatatt-- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70833 14 - 432965 aaaaaaaTATATA---------T-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 126994 14 + 85365473 acaatgatatata---------t-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978540 10 + 185818997 ----gtgtgtgtg---------t-- i rheMac8.chr3 C 0 I 2 s macFas5.chr3 33594877 10 + 192294377 ----gtgtgtgtg---------t-- i macFas5.chr3 C 0 I 2 s cerAty1.NW_012002954v1 16948870 14 - 21915920 gtgtgtgtgtgtg---------t-- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 109347 9 - 2515279 -----tgtgtgtg---------t-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264654 14 + 6586416 tcatatatatata---------t-- i colAng1.NW_012117710v1 I 1 I 26 s calJac3.chr2 146651258 16 - 204313951 AAAAAAATATAAA---------TCA i calJac3.chr2 C 0 C 0 e otoGar3.GL873611 2209755 9 - 8137123 I e canFam3.chr6 61014489 0 - 77573801 C e chlSab2.chr28 84886 41 - 21531802 I e macNem1.NW_012019910v1 4356134 42 - 9440265 I e aotNan1.NW_018514293v1 68580 27 + 376347 I e saiBol1.JH378296 339495 0 - 2409723 C e cebCap1.NW_016107703v1 474217 6 - 2125214 I a score=-3465.000000 s hg38.chr7_KI270899v1_alt 109591 1 + 190869 -a s panTro5.chr7_NW_015973501v1_random 7863 1 - 19153 -a i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70847 1 - 432965 -A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127008 1 + 85365473 -a i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978552 1 + 185818997 -g i rheMac8.chr3 I 2 C 0 s macFas5.chr3 33594889 1 + 192294377 -g i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 4356176 1 - 9440265 -G i macNem1.NW_012019910v1 I 42 C 0 s cerAty1.NW_012002954v1 16948884 1 - 21915920 -g i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 109356 1 - 2515279 -g i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264694 1 + 6586416 -a i colAng1.NW_012117710v1 I 26 C 0 s calJac3.chr2 146651274 1 - 204313951 T- i calJac3.chr2 C 0 C 0 e otoGar3.GL873611 2209755 9 - 8137123 I e canFam3.chr6 61014489 0 - 77573801 C e chlSab2.chr28 84886 41 - 21531802 I e aotNan1.NW_018514293v1 68580 27 + 376347 I e saiBol1.JH378296 339495 0 - 2409723 C e cebCap1.NW_016107703v1 474217 6 - 2125214 I a score=20815.000000 s hg38.chr7_KI270899v1_alt 109592 8 + 190869 tatatata s panTro5.chr7_NW_015973501v1_random 7864 8 - 19153 tatatata i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70848 8 - 432965 TAAGTATA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127009 8 + 85365473 aatatata i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978553 8 + 185818997 tgtgtgtg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594890 8 + 192294377 tgtgtgtg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356177 8 - 9440265 TGTGTGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948885 8 - 21915920 tgtgtgtg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84927 8 - 21531802 tatatata i chlSab2.chr28 I 41 C 0 s manLeu1.NW_012101810v1 109357 8 - 2515279 tgtatgtg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264695 8 + 6586416 tatatata i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651275 2 - 204313951 ------TG i calJac3.chr2 C 0 C 0 e otoGar3.GL873611 2209755 9 - 8137123 I e canFam3.chr6 61014489 0 - 77573801 C e aotNan1.NW_018514293v1 68580 27 + 376347 I e saiBol1.JH378296 339495 0 - 2409723 C e cebCap1.NW_016107703v1 474217 6 - 2125214 I a score=12683.000000 s hg38.chr7_KI270899v1_alt 109600 4 + 190869 tata s panTro5.chr7_NW_015973501v1_random 7872 4 - 19153 tata i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70856 4 - 432965 TATC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127017 4 + 85365473 tatC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978561 4 + 185818997 tATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594898 4 + 192294377 tATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356185 4 - 9440265 TATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948893 4 - 21915920 tATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84935 4 - 21531802 tata i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109365 4 - 2515279 tgtA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264703 4 + 6586416 tata i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651277 1 - 204313951 T--- i calJac3.chr2 C 0 C 0 s canFam3.chr6 61014489 4 - 77573801 TATG i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2209755 9 - 8137123 I e aotNan1.NW_018514293v1 68580 27 + 376347 I e saiBol1.JH378296 339495 0 - 2409723 C e cebCap1.NW_016107703v1 474217 6 - 2125214 I a score=-5582.000000 s hg38.chr7_KI270899v1_alt 109604 2 + 190869 A----------------T- s panTro5.chr7_NW_015973501v1_random 7876 18 - 19153 aattatatatatatCATT- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70860 2 - 432965 A----------------T- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127021 2 + 85365473 A----------------T- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978565 2 + 185818997 A----------------T- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594902 2 + 192294377 A----------------T- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356189 2 - 9440265 A----------------T- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948897 2 - 21915920 A----------------T- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84939 2 - 21531802 A----------------T- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109369 2 - 2515279 A----------------C- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264707 2 + 6586416 A----------------T- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651278 1 - 204313951 -----------------C- i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339495 2 - 2409723 A----------------T- i saiBol1.JH378296 C 0 C 0 s canFam3.chr6 61014493 2 - 77573801 -----------------TC i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2209755 9 - 8137123 I e aotNan1.NW_018514293v1 68580 27 + 376347 I e cebCap1.NW_016107703v1 474217 6 - 2125214 I a score=17185.000000 s hg38.chr7_KI270899v1_alt 109606 2 + 190869 TG s panTro5.chr7_NW_015973501v1_random 7894 2 - 19153 GG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70862 2 - 432965 TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127023 2 + 85365473 TG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978567 2 + 185818997 TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594904 2 + 192294377 TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356191 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948899 2 - 21915920 TG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84941 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109371 2 - 2515279 TG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264709 2 + 6586416 TG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651279 2 - 204313951 TG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339497 2 - 2409723 TG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474223 2 - 2125214 TG i cebCap1.NW_016107703v1 I 6 C 0 s canFam3.chr6 61014495 2 - 77573801 TG i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2209755 9 - 8137123 I e aotNan1.NW_018514293v1 68580 27 + 376347 I a score=73423.000000 s hg38.chr7_KI270899v1_alt 109608 8 + 190869 -TTTGA-CCA s panTro5.chr7_NW_015973501v1_random 7896 9 - 19153 -TTTGACCCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70864 8 - 432965 -TTTGA-CCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127025 8 + 85365473 -TTTGA-CCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978569 8 + 185818997 -TTTGA-CCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594906 8 + 192294377 -TTTGA-CCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356193 8 - 9440265 -TTTGA-CCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948901 8 - 21915920 -TTTGA-CCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84943 8 - 21531802 -TTTGA-CCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109373 8 - 2515279 -TTTGA-CCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264711 8 + 6586416 -TTTGA-CCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651281 8 - 204313951 -TTTGA-CCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339499 8 - 2409723 -TCTGA-CCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474225 8 - 2125214 -TTTGA-CCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2209764 8 - 8137123 -TTTAG-CCA i otoGar3.GL873611 I 9 C 0 s canFam3.chr6 61014497 9 - 77573801 TTTGGG-CCA i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 68580 27 + 376347 I a score=2062808.000000 s hg38.chr7_KI270899v1_alt 109616 256 + 190869 AATGCAG-TGAT-TTCTCCCAGTTTG--AG-AAATAACT-C---TTCTTTATAA----------------------------------AGTC-ATGTTTTGGT-GAAGCA-GGGCTG-GGTAAACCTG--CGCCAC-AATGGGTG-GGAGC-CCGC-AGGAGAC-AGGCCCTCGT----C---CAG-CAGTGT-CC----AGACAGC-TGCAT---G-GAGCAGAACACGCAGCC-----CT-CACCCTAGAGCCC-CGACTTGGGTCATGGGGGCTTAGAAAGAAAGAAAGGAAGAGACAAGACTGGAT---AAG--AACCGGGTTTGGTCAAG-GAAAG s panTro5.chr7_NW_015973501v1_random 7905 276 - 19153 AATGCAGCTGATATTCTCCCAGTTTGCCAGTAAATAACTGC---TTCTTTATAA----------------------------------AGTCAATGTTTTGGT-GAAGCATGGGCTG-GGTAAACCTGTCCGCCACAAATGGGTGCGGAGC-CCAC-AGGAGACGAGACCCTCAT----C--GCAG-CAGTGT-CC----AAGCAGCTTGCAT---GCGAGCAGAACACGCAGCC-----CTACACCCTAGAGCCCGGGACTTGGGTCATGCGGGCTTAGAAAAAAAGAAAGGAAAAGACAAGACTGGATC--AAG--AACCGGTTTCGGTCAAGCGAAAG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 70872 256 - 432965 AATGCAG-TGAT-TTCTCCCAGTTTG--AG-AAATAACT-C---TTCTTTATAA----------------------------------AGTC-ATGTTTTGGT-GAAGCA-GGGCTG-GGTAAACCTG--CGCCAC-AATGGGTG-GGAGC-CCAC-AGGAGAC-AGGCCCTCGT----C---CAG-CAGTGT-CC----AGACAGC-TGCAT---G-GAGCAGAACACGCAGCC-----CT-CACCCTAGAGCCC-CGGCTTGGGTCATGAGGGCTTAGaaaaaaagaaaggaaaagacaagactggat---aag--aaCCGGGTTTGGTCAAG-GAAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127033 255 + 85365473 AATGCAG-TGAT-TTCTCCCAGTTAG--AG-AAATAGCT-C---TTATTTATAA----------------------------------AGTC-ATGTTTTGGT-GAAGCA-GGGCTG-GGTAAACCTG--CACCAC-AAT-GGTG-GGAGC-CCAC-AGGAGAC-GAGCCCTCGT----C---CAG-CAGGGT-CC----AGATAGC-TGTGT---G-GAGCGGAACACGCAGCC-----CT-CACCCTAGAGCCC-CGGCCTGGGTCATGGGGGCTTAGAAAAAAACAAAGGAAAAGACAAGGCTGGAT---AAG--AACAGGGTTTGGTCAAG-GAAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978577 255 + 185818997 AATGCAG-TGAT-TTCTCCCAGTTTG--AG-AAATAACT-C---TTATTTATAA----------------------------------AGTC-ATGTTTTGAT-AAAGCA-GTGCTG-GGAAAACCTG--TGCCAC-AGTGGGTG-GGAGC-CCAC-AGGAGAC-AGGCCCTCGT----C---CAG-CAGTGT-CC----AGACAGC-TGCAT---G-GAACGGAACATCCAGCC-----CT-CACCCTAGAGCCC-TGGCCTGGGCCATGCGGGCTTAGaaaaaaagaaaggaaaagacaaggctggaa---aag--aaCTGG-TTTGGTCAAG-GGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33594914 255 + 192294377 AATGCAG-TGAT-TTCTCCCAGTTTG--AG-AAATAACT-C---TTATTTATAA----------------------------------AGTC-ATGTTTTGAT-AAAGCA-GTGCTG-GGAAAACCTG--TGCCAC-AGTGGGTG-GGAGC-CCAC-AGGAGAC-AGGCCCTCGT----C---CAG-CAGTGT-CC----AGACAGC-TGCAT---G-GAACGGAACATCCAGCC-----CT-CACCCTAGAGCCC-TGGCCTGGGCCATGCGGGCTTAGaaaaaaagaaaggaaaagacaaggctggaa---aag--aaCTGG-TTTGGTCAAG-GGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356201 255 - 9440265 AATGCAG-TGAT-TTCTCCCAGTTTG--AG-AAATAACT-C---TTATTTATAA----------------------------------AGTC-ATGTTTTGAT-AAAGCA-GTGCTG-GGAAAACTGG--TGCCAC-AGTGGGTG-GGAGC-CCAC-AGGAGAC-AGGCCCTCGT----C---CAG-CAGTGT-CC----AGACAGC-TGCAT---G-GAACGGAACATCCAGCC-----CT-CACCCTAGAGCCC-TGGCCTGGGCCATGCGGGCTTAGaaaaaaagaaaggaaaagacaaggctggaa---aag--aaCTGG-TTTGGTCAAG-GGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16948909 254 - 21915920 AATGCAG-TGAT-TTCTCCCAGTTTG--AG-AAATAACT-C---TTATTTATAA----------------------------------AGTC-ATGTTTTGAT-AAAGCA-GTGCTG-GGAAAACCTG--TGCCAC-AGTGGGTG-GGAGC-CCAC-AGGAGAC-GGGCCCTCAT----C---CAG-CAGTGT-CC----AGACAGC-TGCGT---G-GAACGGAACACCCAGCC-----CT-CACCCTAGAGCCC-TGGCCTGGGCCATGGGTGCTTAGAAAAAAAGAAAGGAAAAGACAAGGCTGGAT---AAG--AACCGG-TTTGGTCAA--GAAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 84951 255 - 21531802 AATGCAG-TGAT-TTCTCCCAGTTTA--AG-GGACAAAT-C---TTTTTTATAA----------------------------------ACTC-ATGTTTTGAT-GAAGCA-ATGCTG-GGAAAACCTG--TGCCAC-AGTGGGTG-GGAGC-CCCC-AGGAGAG-AGGCCCTCGT----C---CAG-CAGTGT-CC----AGACAGC-TGTGT---G-GAACAGAACACCCAGCC-----CT-CACCCTAGAACCC-TGGCCTGGGCCATGGGGGCTTAGAAAAAAAGAAAGGAAAAGACAAGGCTGGGT---AAG--AACCGG-TTTGGTCAAG-GAAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109381 255 - 2515279 AATGCAG-TGAT-TTCTCCCAGTTTG--AG-AAATAACT-C---TTATTTATAA----------------------------------AGTC-ATGTTTTGAT-AAAGCA-GTGCTG-GGAAAACCTG--TGCCAC-AGTGGGTG-GGAGC-CCAC-AGGAGAC-AGGCCCTCAT----C---CAG-CAGTGT-CC----AGACAGC-TGCGT---G-GAATGGAACACCCAGCT-----CT-CACCCTAGAGCCC-TGGCCTGGGCCATGGGGGTTTAGAAAAAAAGAAAGGAAAAGACAAGGCTGGAT---AAG--AACCGG-TTTGGTCAAG-GAAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264719 254 + 6586416 AATGCAG-TGAT-TTCTCCCAGTTTG--AG-AGATAACT-C---TTATTTATAA----------------------------------AGTC-ATGTTTTGAT-GAAGCA-GTGCTG-GGAAAACCTG--TGCCAC-AGTGGGTG-GGAGC-CTAC-AGGAGAC-AGGCCCTCGT--------CAG-CAGTGT-CC----AGACAGC-TGTGT---G-GAACAGAACACCCAGCC-----CT-CACCCTAGAGCCC-TGGCCTGGGCCATGGGGGCTTAGAAAAAAAGAAAGGAAAAGACAAGGCTGGAT---AAG--AACCAG-TTTGGTCAAG-GAAAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651289 258 - 204313951 AATACAG-TGAT-TTCTCCCAGTTTG--AG-AAATAACT-C---TTATTTACAA----------------------------------GGTC-ATGTTGCGGT-GAAGCA-GAGCTG-GGTAAACCTG--AGCCAC-AATGGGCG-GGAGC-CCAT-GGGAGCC-AGGCCATTGT----CCAGCAG-CAGTGT-CC----AGACAGC-TGGGT---G-GAGCGGAACATGCAGCC-----CT-CACCCTAGAGTCC--AGCCTGGATCATGGGGGCTTAGAAAAAAAGAAAGAAAAAGACAAGGCTGGAT---AAA--AGCCGGGTTTGGTCCAG-GAAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339507 255 - 2409723 AATGCAG-TGAT-TTCTCCCAGTCTG--AG-AAATATCT-A---TTATTTACAA----------------------------------GGTT-GTGTTGCCGC-AATGCA-GAGCTG-GGTAAACCTG--AGCCAC-AATGGGCG-GGAGC-CCAT-GGGAGCC-AGGCCGTAGT----CCAGCAG-CAGTGT-CC----AGACAGC-TGGGT---A-GAGCAGAACATGCAGCC-----CT-CACCCTAGAGCCC--AGCCTGGATCATGGGGGCGTAGAAAAA---AAAGGAAAAGACAAGGCTGGAT---AAG--AACTGGCTTTGGTCCAG-GAGAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474233 257 - 2125214 AATGCAG-TGAT-TTCTCCCAGCTTG--AG-AAATAACT-G---TTATTTACAA----------------------------------GGTC-GTGTTGCATC-GAAGCA-AAGCTG-GGTAAACCTG--AGCCAC-AATGGGCA-GGAGC-CCAC-GGGAGCC-AGGCCGTCGT----CCAGCAG-CAGTGT-CC----AGACAGC-TGGGT---G-GAG-GGAACATGCAGCC-----CT-CGCCCTAGAGCCC--GGCCAGGATCATGGGGGCTTAGAAAAAAAGAAAGGAAAAGACAAGGCTGGAT---AAG--AGCTGGGTTTGGTCCAG-GAAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68607 264 + 376347 AATGCAG-TGAT-TTCTCCCAGTTTG--AG-ACCTAACT-G---TTATTTACCA----------------------------------GGTC-GTGTTGCGGT-GAAGCA-GAGCTG-GGTAAACCTG--AGCCAC-AAT-GGCG-GGAGCGCCATCGGGAGCC-CGGCCGTCGTCCAGCCAGCAA-AAGTGTCCC----AGACAGC-TGGGT---G-GAGCGGAACATGCAGCC-----CT-CACCCTAGAGCCC--AGCCTGGATCATGGCGGCTTAGAAAAAAAGAAAGGAAAAGACGAGGCTGGAT---AAG--AGCCGGGATTGGTCCAG-GAAAG i aotNan1.NW_018514293v1 I 27 C 0 s otoGar3.GL873611 2209772 259 - 8137123 AATGCAG-ACAT-TTCTCCCACTTTG--AG-AAATAAAT-CTCTTTATTAAAAA----------------------------------AGTC-ATGTTTCCATGGAAGCA-GGACTGAGGCAAACCCG--AGCCCC-TGCTGGCG-TGAGC-CCAC-CAGAGAC-AGGTGCACGT----C---CAGCCAGTGT-CC----AGACAGC-TGCCT---G-GAGAAGGACTTACAGCT-----TC-ACTCCTAGGTGCC-AGAACTGGATGGCAGGGGCTTAGAAGGAAA------AAAAGACAAAGCTCAATCAGAAG--AACAAGGTTTAGCTCAG-GAAAT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014506 290 - 77573801 AATGCAG-TGAC-TTCTCTCAGACTG--AG-aaataaat-----ttattaaaaataattctgaaaaaaaattcaaaaaaattaaaaataatt-CTGTTGCAATGAAAGCA-AGGCTGAGGTAGATCTG--AGCCAC-AGTTAGTG-TGAGT-CCCC-TGGGTGC-AG------CT----G---TGG-CAGAGT-CCCCTGGCACTGC-TGGGCTAGA-GGGCAGTGCACACAGCCACCCACT-ACCCCTACTTGCC-AGGCCTGGACTGTGGG----CAGAGAAAAAGA----GAAAGATAAGAATTGAT---AAGGAGAATGG-GTTGGCCAGG-GGGGG i canFam3.chr6 C 0 I 76 a score=418704.000000 s hg38.chr7_KI270899v1_alt 109872 58 + 190869 GAGGG--GTGG--ACGTGCAAAGCC-CTCCCGTGCGGGAG-------CCCTGGGACGGGGGCACCATCCC s panTro5.chr7_NW_015973501v1_random 8181 59 - 19153 GAGCGGTGTGG--ACGTGCAAAGCCTCCTCCGTGCGGGAG-------CCCTGGGAC--GGGCACCATCCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71128 58 - 432965 GAGGG--GTGG--ACGTGCAAAGCC-CTCCCGTGCGGGAG-------CCCTGGGACGGGAGCACCATCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127288 58 + 85365473 GAGGG--GTGG--AAGTGCAAAGCC-CTCCCGTGCAGGAG-------CCCTCGGACGGGGGCACCATCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978832 57 + 185818997 GAGG---ATGG--AAGTGCAGAGCC-CTCCCGTGCGGGAG-------CCCTGGGACGGGGGCACCATCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595169 57 + 192294377 GAGG---ATGG--AAGTGCAGAGCC-CTCCCGTGCGGGAG-------CCCTGGGACGGGGGCACCATCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356456 57 - 9440265 GAGG---ATGG--AAGTGCAGAGCC-CTCCCGTGCGGGAG-------CCCTGGGACGGGGGCACCATCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16949163 57 - 21915920 GAGG---GTGG--AAGTGCAGAGCC-CTCCCATGCGGGAG-------CCCTGGGATGGGGGCACCATCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85206 57 - 21531802 GAGG---GTGG--AAGTGCAGAGCC-CTCCCGTGCAGGAG-------CCCTGGGACGGGGGCACCATCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109636 57 - 2515279 GAGG---GTGG--AAGTGCAGAGCC-CTCCCATGCGGGAG-------CCCTGGGACGGGGGCACCATCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 264973 57 + 6586416 GAGG---GTGG--AAGTGCAGAGCC-CTCCCGTGCAGGAG-------CCCTGGGACGGGGGCACCATTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651547 57 - 204313951 GAGGG--GTGG--GGATGAAAAGCC-CTCCCGTGCAGGA--------CCCTGGGACTGGTGCACCATCCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339762 57 - 2409723 GAGGG--GTGG--GGGTGCAAAGCC-CTCCCGTGCAGGG--------CTCTGGGACCAGTGCACCATCCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474490 57 - 2125214 GAGGG--GTGG--GGGTGCAAAGCC-CTCCCGGGCAGGA--------CTCTGGGATCAGTGCACCATCCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68871 57 + 376347 GAGGG--GTGG--GGGAGCAAAGCC-CTCCCGTGCAGGA--------CCCTGGGACCGGTGCACCATCCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2210031 66 - 8137123 TCAG---GCAGCTGACTGCCAAGCC-AGAGAGGGGGAGGGGAAAGAACGCCAGAATAGTGGCACCATCCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61014796 76 - 77573801 I a score=23001.000000 s hg38.chr7_KI270899v1_alt 109930 4 + 190869 ACAG s panTro5.chr7_NW_015973501v1_random 8240 4 - 19153 ACAG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71186 4 - 432965 ACAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127346 4 + 85365473 ACAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978889 4 + 185818997 CCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595226 4 + 192294377 CCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356513 4 - 9440265 CCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16949220 4 - 21915920 CCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85263 4 - 21531802 CCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109693 4 - 2515279 CCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265030 4 + 6586416 CCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651604 4 - 204313951 ATAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339819 4 - 2409723 ATAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474547 4 - 2125214 ATAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68928 4 + 376347 ATAG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I a score=6000.000000 s hg38.chr7_KI270899v1_alt 109934 4 + 190869 CCCC s panTro5.chr7_NW_015973501v1_random 8244 4 - 19153 CCCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71190 4 - 432965 CCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127350 4 + 85365473 CCCC i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4356517 4 - 9440265 CCCC i macNem1.NW_012019910v1 C 0 C 0 s aotNan1.NW_018514293v1 68932 4 + 376347 CCCC i aotNan1.NW_018514293v1 C 0 I 1 e colAng1.NW_012117710v1 265034 0 + 6586416 C e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C a score=1000.000000 s hg38.chr7_KI270899v1_alt 109938 1 + 190869 C s panTro5.chr7_NW_015973501v1_random 8248 1 - 19153 C i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71194 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127354 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4356521 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 e colAng1.NW_012117710v1 265034 0 + 6586416 C e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C a score=3471.000000 s hg38.chr7_KI270899v1_alt 109939 7 + 190869 CGGCAGC s panTro5.chr7_NW_015973501v1_random 8249 7 - 19153 CGGCAGC i panTro5.chr7_NW_015973501v1_random C 0 I 3 s gorGor5.CYUI01015914v1 71195 7 - 432965 CGGCAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127355 7 + 85365473 CGGGAGC i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 265034 0 + 6586416 C e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macNem1.NW_012019910v1 4356522 0 - 9440265 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C a score=4280.000000 s hg38.chr7_KI270899v1_alt 109946 17 + 190869 CGCCGATCCCCCCGACA s gorGor5.CYUI01015914v1 71202 17 - 432965 CGCCGATCCCCTCGACA i gorGor5.CYUI01015914v1 C 0 I 64823 s nomLeu3.chr20 127362 17 + 85365473 CGCCGATCCCCCCGAGA i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 265034 0 + 6586416 C e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macNem1.NW_012019910v1 4356522 0 - 9440265 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C e panTro5.chr7_NW_015973501v1_random 8256 3 - 19153 I a score=52.000000 s hg38.chr7_KI270899v1_alt 109963 5 + 190869 CAGCC s nomLeu3.chr20 127379 5 + 85365473 CTGGC i nomLeu3.chr20 C 0 I 68134 e colAng1.NW_012117710v1 265034 0 + 6586416 C e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macNem1.NW_012019910v1 4356522 0 - 9440265 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C e panTro5.chr7_NW_015973501v1_random 8256 3 - 19153 I e gorGor5.CYUI01015914v1 71219 64823 - 432965 I a score=0.000000 s hg38.chr7_KI270899v1_alt 109968 28 + 190869 CCCCGGGAGCCGCCGATCCCCCCGACAC e colAng1.NW_012117710v1 265034 0 + 6586416 C e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macNem1.NW_012019910v1 4356522 0 - 9440265 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C e nomLeu3.chr20 127384 68134 + 85365473 I e panTro5.chr7_NW_015973501v1_random 8256 3 - 19153 I e gorGor5.CYUI01015914v1 71219 64823 - 432965 I a score=2593.000000 s hg38.chr7_KI270899v1_alt 109996 29 + 190869 AGCCCCCCGGGAGCCGCCGATCCCCCCGA s nomLeu3.chr20 195518 29 + 85365473 AGCCCCCCGGGAGCCACCAATCCCCCCGA i nomLeu3.chr20 I 68134 T 32 e colAng1.NW_012117710v1 265034 0 + 6586416 C e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macNem1.NW_012019910v1 4356522 0 - 9440265 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C e panTro5.chr7_NW_015973501v1_random 8256 3 - 19153 I e gorGor5.CYUI01015914v1 71219 64823 - 432965 I a score=2884.000000 s hg38.chr7_KI270899v1_alt 110025 32 + 190869 CACAGCCCCCCGGGAGCCGCCGATCCCCCCGA s nomLeu3.chr20 195515 32 + 85365473 CACAGCCCCCCGGGAGCCACCAATCCCCCCGA i nomLeu3.chr20 T 32 T 32 e colAng1.NW_012117710v1 265034 0 + 6586416 C e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macNem1.NW_012019910v1 4356522 0 - 9440265 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C e panTro5.chr7_NW_015973501v1_random 8256 3 - 19153 I e gorGor5.CYUI01015914v1 71219 64823 - 432965 I a score=3846.000000 s hg38.chr7_KI270899v1_alt 110057 13 + 190869 CACAGCCCCCCGG s gorGor5.CYUI01015914v1 136042 13 - 432965 CACAGCCCCCCGG i gorGor5.CYUI01015914v1 I 64823 C 0 s nomLeu3.chr20 195515 13 + 85365473 CACAGCCCCCCGG i nomLeu3.chr20 T 32 C 0 e colAng1.NW_012117710v1 265034 0 + 6586416 C e otoGar3.GL873611 2210097 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macNem1.NW_012019910v1 4356522 0 - 9440265 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C e panTro5.chr7_NW_015973501v1_random 8256 3 - 19153 I a score=5293.000000 s hg38.chr7_KI270899v1_alt 110070 25 + 190869 GAGCCGCCGATCCCCCCGACACAGC s gorGor5.CYUI01015914v1 136055 25 - 432965 AAGCCGCCGATCCCCCCGACACAGC i gorGor5.CYUI01015914v1 C 0 T 64860 s nomLeu3.chr20 195528 25 + 85365473 GAGCCACCAATCCCCCCGACACAGC i nomLeu3.chr20 C 0 C 0 s otoGar3.GL873611 2210097 9 - 8137123 GGGCCATCG---------------- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 265034 0 + 6586416 C e canFam3.chr6 61014796 76 - 77573801 I e chlSab2.chr28 85267 0 - 21531802 C e manLeu1.NW_012101810v1 109697 0 - 2515279 C e cerAty1.NW_012002954v1 16949224 0 - 21915920 C e macNem1.NW_012019910v1 4356522 0 - 9440265 C e macFas5.chr3 33595230 0 + 192294377 C e rheMac8.chr3 33978893 0 + 185818997 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e saiBol1.JH378296 339823 0 - 2409723 C e cebCap1.NW_016107703v1 474551 0 - 2125214 C e calJac3.chr2 146651608 0 - 204313951 C e panTro5.chr7_NW_015973501v1_random 8256 3 - 19153 I a score=19488.000000 s hg38.chr7_KI270899v1_alt 110095 5 + 190869 CCCCC s gorGor5.CYUI01015914v1 71220 5 - 432965 TCCCC i gorGor5.CYUI01015914v1 T 64860 C 0 s nomLeu3.chr20 195553 5 + 85365473 CGCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978893 5 + 185818997 CCCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595230 5 + 192294377 CCCCA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16949224 5 - 21915920 CCCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85267 5 - 21531802 CCCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109697 5 - 2515279 CCCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265034 5 + 6586416 CCCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651608 5 - 204313951 CCCGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339823 5 - 2409723 CCCCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474551 5 - 2125214 CCCCT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2210106 0 - 8137123 C e canFam3.chr6 61014796 76 - 77573801 I e macNem1.NW_012019910v1 4356522 0 - 9440265 C e aotNan1.NW_018514293v1 68936 1 + 376347 I e panTro5.chr7_NW_015973501v1_random 8256 3 - 19153 I a score=76915.000000 s hg38.chr7_KI270899v1_alt 110100 9 + 190869 GGGAGCCGC s gorGor5.CYUI01015914v1 71225 9 - 432965 GGGAGCCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195558 9 + 85365473 GGGAGCCGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978898 9 + 185818997 GGGAGCCGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595235 9 + 192294377 GGGAGCCGC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16949229 9 - 21915920 GGGAGCCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85272 9 - 21531802 GGGAGCCGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109702 9 - 2515279 GGGAGCCGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265039 9 + 6586416 GGGAGCCGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651613 9 - 204313951 GGGAGCCAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339828 9 - 2409723 GGGAACCAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474556 9 - 2125214 GGGAGCCAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68937 9 + 376347 GGGAGCCAC i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2210106 9 - 8137123 GGGAGCAGC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014872 9 - 77573801 GGGGGCAAC i canFam3.chr6 I 76 C 0 e macNem1.NW_012019910v1 4356522 0 - 9440265 C e panTro5.chr7_NW_015973501v1_random 8256 3 - 19153 I a score=116308.000000 s hg38.chr7_KI270899v1_alt 110109 17 + 190869 CGATCCCCCC-GAGACTG s panTro5.chr7_NW_015973501v1_random 8259 17 - 19153 CGATCCCGCC-CAGACTG i panTro5.chr7_NW_015973501v1_random I 3 C 0 s gorGor5.CYUI01015914v1 71234 17 - 432965 CGATCCCCGC-GAGACTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195567 17 + 85365473 TGATCCCCCC-GAGACTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978907 17 + 185818997 CGATCCCCCT-GAGACCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595244 17 + 192294377 CGATCCCCCC-GAGACCA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16949238 17 - 21915920 CGATCCCCCC-GAGACTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85281 17 - 21531802 CGATCCCCCC-GAGACCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109711 17 - 2515279 CGATCTCCCC-GAGACCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265048 17 + 6586416 CAATCCCCCC-GAGACCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651622 17 - 204313951 TGATTTTCCC-TAGACAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339837 17 - 2409723 CGATCTCCCC-TAGACAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474565 17 - 2125214 CGATCTCCCC-TAGACAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68946 17 + 376347 CGATCTCCCC-TAGACAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2210115 17 - 8137123 CACTCCCTGG-GAGACTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014881 18 - 77573801 CAATCCCTGTGGAGACTG i canFam3.chr6 C 0 C 0 e macNem1.NW_012019910v1 4356522 0 - 9440265 C a score=13600.000000 s hg38.chr7_KI270899v1_alt 110126 1 + 190869 G s panTro5.chr7_NW_015973501v1_random 8276 1 - 19153 G i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71251 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195584 1 + 85365473 G i nomLeu3.chr20 C 0 T 68201 s rheMac8.chr3 33978924 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595261 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356522 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16949255 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85298 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109728 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265065 1 + 6586416 G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651639 1 - 204313951 G i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339854 1 - 2409723 G i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474582 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68963 1 + 376347 G i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2210132 1 - 8137123 G i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014899 1 - 77573801 G i canFam3.chr6 C 0 C 0 a score=95282.000000 s hg38.chr7_KI270899v1_alt 110127 10 + 190869 CCTGC-ACCTG s panTro5.chr7_NW_015973501v1_random 8277 11 - 19153 CCTGCCACCTG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71252 10 - 432965 CCTGC-ACCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127384 11 + 85365473 CCTGCTACTTG i nomLeu3.chr20 T 68201 C 0 s rheMac8.chr3 33978925 10 + 185818997 CCTGC-ACCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595262 10 + 192294377 CCTGC-ACCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356523 10 - 9440265 CCTGC-ACCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16949256 10 - 21915920 CCTGC-ACCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85299 10 - 21531802 TCTGC-ATCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109729 10 - 2515279 CCTGC-ACCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265066 10 + 6586416 CCTGT-ACCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651640 10 - 204313951 CCTGC-ACCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339855 10 - 2409723 CCTGC-ACCTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474583 10 - 2125214 CCTGC-ACTTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 68964 10 + 376347 CCTGC-ACCTG i aotNan1.NW_018514293v1 C 0 I 61995 s otoGar3.GL873611 2210133 10 - 8137123 CCTAC-ACTGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014900 10 - 77573801 CCTGT-GCCAG i canFam3.chr6 C 0 C 0 a score=58820.000000 s hg38.chr7_KI270899v1_alt 110137 14 + 190869 ---------CACATCTG-GGGGGC s panTro5.chr7_NW_015973501v1_random 8288 15 - 19153 ---------CACATCTGCGGGGGC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71262 14 - 432965 ---------CACATCCA-GGGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127395 14 + 85365473 ---------CACATCTG-GGGGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33978935 14 + 185818997 ---------CACATGTG-GGGGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595272 14 + 192294377 ---------CACATGTG-GGGGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356533 14 - 9440265 ---------CACATGTG-GGGGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16949266 14 - 21915920 ---------CACATGCG-GGGGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85309 14 - 21531802 ---------CACGTGCG-GGGGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109739 14 - 2515279 ---------CACATGCC-GGGGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265076 14 + 6586416 ---------CACATGTT-GGGGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651650 14 - 204313951 ---------CACATATG-GGGGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339865 14 - 2409723 ---------CACATGTT-GGGGTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474593 14 - 2125214 ---------CGCATGCA-GGGGTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2210143 11 - 8137123 ------------GAGTG-GGAGAT i otoGar3.GL873611 C 0 I 3 s canFam3.chr6 61014910 17 - 77573801 GGCTGTGCCTAGATATA------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 68974 61995 + 376347 I a score=14675.000000 s hg38.chr7_KI270899v1_alt 110151 2 + 190869 GG s panTro5.chr7_NW_015973501v1_random 8303 2 - 19153 GG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71276 2 - 432965 GG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127409 2 + 85365473 AG i nomLeu3.chr20 C 0 I 68201 s rheMac8.chr3 33978949 2 + 185818997 GG i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33595286 2 + 192294377 GG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4356547 2 - 9440265 GG i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16949280 2 - 21915920 GG i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 85323 2 - 21531802 GG i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 109753 2 - 2515279 GG i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 265090 2 + 6586416 GG i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chr2 146651664 2 - 204313951 GG i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339879 2 - 2409723 GG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474607 2 - 2125214 GG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 130969 1 + 376347 -G i aotNan1.NW_018514293v1 I 61995 C 0 s otoGar3.GL873611 2210157 1 - 8137123 G- i otoGar3.GL873611 I 3 C 0 s canFam3.chr6 61014927 2 - 77573801 GG i canFam3.chr6 C 0 C 0 a score=273670.000000 s hg38.chr7_KI270899v1_alt 110153 38 + 190869 GG----CCCCGAATTG-TCCTGCCACAGTGGCCCCGCC-GGCAG s panTro5.chr7_NW_015973501v1_random 8305 40 - 19153 GG----CCCCGAATTGGTCCTGCCACAGTGGTCCCGCCCAGCAG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71278 39 - 432965 GGC---CCCCGAATTG-TTCTGCCACAGTGGCCCTGCC-CGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195612 38 + 85365473 GG----CCCCGAATTG-TTCTGCCACAGTGGCCCGGCC-AGCAG i nomLeu3.chr20 I 68201 C 0 s rheMac8.chr3 33978952 38 + 185818997 GG----CCCGGAATTG-TTCTGCCACAGTGGCCCGGCC-GGCAG i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33595289 38 + 192294377 GG----CCCGGAATTG-TTCTGCCACAGTGGCCCGGCC-GGCAG i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4356550 38 - 9440265 GG----CCCGGAATTG-TTCTGCCACAGTGGCCCGGCC-GGCAG i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16949283 38 - 21915920 GG----CCCGGAATTG-TTCTGCCACAGTGGCCCGGCC-GGTAG i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 85326 38 - 21531802 GG----CCCGGAATCG-TTCTGCCACAGTGGCCCAGCC-GGCAG i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 109756 38 - 2515279 GG----CCCGGAATTG-TTCTGCCACAGTGGCCCGGCC-GGCAG i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 265093 38 + 6586416 GG----CCCAGAATTG-TTCTGCCACAGTGGCCCGGCC-GGCAG i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chr2 146651666 38 - 204313951 GG----GCCCCCACTG-TTCTGTCACAGTGGCCTGGAC-AGCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 339881 37 - 2409723 GG----CCCCCCACTG-TTCTGCCACAGTGACCCGGCC-AGCT- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 474609 38 - 2125214 GG----GCCCCCATTG-TTCTGCCACAGTGGCCCAGCC-AGCTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 130970 37 + 376347 GG----GCCCCGATTG-TTCTGCCACAGTGGCCCGGCC-TGCC- i aotNan1.NW_018514293v1 C 0 T 61979 s otoGar3.GL873611 2210158 41 - 8137123 --GGCACCAGCCATTGCTCCTGCCACTGAGGCTTGGCC-AGCAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61014929 41 - 77573801 --GGCACCAGCAGCTGCCTTTGCTGCTGTGACTTGACT-GGCAG i canFam3.chr6 C 0 C 0 a score=2931081.000000 s hg38.chr7_KI270899v1_alt 110191 332 + 190869 GGAGATC--AGAGGAAGAAATAAAACCCTCAGGCCTCA-CCTGGGATCCAGA------TTCGAGGCCGGAAGAGCAGACTTTGCCGGGGG-CACTCA-CGC-AGATCCCCAC-GTCTC-AGGGCAC---CGCAGT---CCTATTAC-CATAAGCGATCATG-CAAA-GGTGTGGTAAAA-GCCAT-CTGTCATTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GACA-TAAGCCATCCCAGGG-CTCAGCCAAGAAATGG-CCATAAAA-TCT--GGCATA-ATGACCTCAAAGCACACTTTCCAATATAAAGGTTATTCTAGGCAG-CTGTTTCCTG-A--TTATTTACGTGCAATAATTTTACACC- s panTro5.chr7_NW_015973501v1_random 8345 351 - 19153 GGAGATCCAAGAGTAAGAAATAAATCGCTCAGGCCTCAGCCTGGGATCCAGA-----CTTCGGAGCCGAGAG-GCAGACTTTGCCGGGGG-CACTCAACGCCAGATCCCCAC-GTCTC-AGGG-AC---CGCAGT---CCTATTACGCACAAGTGATCATGGCAAACGGTGTGATAAAACGCCATTCTGTCATTCATAAAATGTGATGATTGCCTTTCTAGCAAAAGACAATAAGCCCACCCAGGCTCACAGCCAAGAAATGG-CCATAAAAATCTTCGGCATACATGACCTCAAAGCACACTTTCCAATATAAAGGTTATTCTAGGCAGCCTGTTTCCTGAA--TTATTTACGTGCAATAA-TTTACACC- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71317 332 - 432965 GGAGATC--AGAGGAAGAAATAAAATCCTCAGGCCTCA-CCTGGGATCCAGA------TTCGAGGCTGGAAGAGCAGACTTTGCCTGGGG-CACTCA-CGC-AGATCCCCAC-GTCTC-AGGGCAC---CGCAGT---CCTATTAC-CATAAGCGACCATG-CAAA-GGTGCGATAAAA-GCCAT-CTGTCATTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GACA-TAAGCCATCCCGGGG-CTCAGCCAAGAAATGG-CCATAAAA-TCC--GGCATA-ATGACCTCAAAGCACACTTTCCAATATAAAGAACTTTCTAGGCAG-CTGTTTCCTG-A--TTATTTACATGCAATAATTTTACACC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195650 334 + 85365473 GGAGATC--AGAGGAAGAAATAAAATCCTCAGGCCTCA-CCTGGGATCCAGA------TTCAAGGCCCAAAGAGCAGACTTTGCCCGGGG-CACTCA-CGC-AGATCCCCGC-GTGTC-AGGGCAC---TGCAGT---CCTATTAC-CATAAGCGATAATG-CAAA-GGTGTGATAAAA-GCCAT-CTGTCATTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GCCA-TAAGCCATGCCGGGG-CTCAGCCAAGAAATGG-CTATAAAA-TCC--GGCATA-AAGACCTCAAAGCACACTTTCCAATATAAAGAATTTTCTAGGCAG-CTGTTTCCAG-AATTTATCTGTGTGCAATAATTTTACACC- i nomLeu3.chr20 C 0 T 68469 s rheMac8.chr3 33978990 320 + 185818997 GGAGATC--AGAGAAAGAAATAAAATCCTCAGACCTCA-TCTGGGGTCCCGA------------------AGAGCAGCCTTTGCCCGGGG-CCCTCA-CGC-AGATCCCCGC-GTCGC-AGGGCAC---CGCAGT--CCCTATTAC-CATAAGCGATAATG-CAGA-AGTGTGATAAAA-GCCAT-CTGTCATTCATAAAATGTGATGAT-GCCCTTCT-GCAAA-GCCA-TAAGCCAGCCCGGGG-CTCAGCCAAGAAACGG-CTGTAAAA-TCC--GGCGTC-ATGGCCTCAAAGCCCAGTTTCCAATGTAAAGGTTATTCCAAGCAG-CTGTTTCCTG-A--TTATTTACGTGCAATAATTTTATAC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595327 320 + 192294377 GGAGATC--AGAGAAAGAAATAAAATCCTCAGACCTCA-TCTGGGGTCCCGA------------------AGAGCAGCCTTTGCCCGGGG-CCCTCA-CGC-AGATCCCCGC-GTCGC-AGGGCAC---CGCAGT--CCCTATTAC-CATAAGCGATAATG-CAGA-AGTGTGATAAAA-GCCAT-CTGTCATTCATAAAATGTGATGAT-GCCCTTCT-GCAAA-GCCA-TAAGCCAGCCCGGGG-CTCAGCCAAGAAACGG-CTGTAAAA-TCC--AGCGTC-ATGGCCTCAAAGCCCAGTTTCCAATATAAAGGTTATTCCAAGCAG-CTGTTTCCTG-A--TTATTTACGTGCAATAATTTTATAC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356588 320 - 9440265 GGAGATC--AGAGAAAGAAATAAAATCCTCAGACCTCA-TCTGGGGTCCCGA------------------AGAGCAGCCTTTGCCCGGGG-CCCTCA-CGC-CGATCCCTGC-GTCGC-AGGGCAC---CGCAGT--CCCTATTAC-CATAAGCGATAATG-CAGA-AGTGTGATAAAA-GCCGT-CTGTCGTTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GCCA-TAAGCCAGCCCGGGG-CTCAGCCAAGAAACGG-CTGTAAAA-TCC--GGCGTC-ATGGCCTCAAAGCCCAGTTTCCAATATAAAGGTTATTCCAAGCAG-CTGTTTCCTG-A--TTATTTACGTGCAATAATTTTATAC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16949321 320 - 21915920 GGAGATC--AGAGGAAGAAATAAAATCCTCAGGCCTCA-CCTGGGGTCCTGA------------------AGAGCAGCCTTTGCCCGGGG-CCCTCA-CGC-AGATCCCTGC-GTTGC-AGGGCAC---CGCAGT--CCCTATTAC-CATAAGCGATAATG-CAGA-AGTGTGATAAAA-GCCGT-CTGTCGTTCATAAAATGTGATGAT-GCCCTTCT-GCAAA-GCCA-TAAGCCAGCCCGGGG-CTCAGCCAAGAAACGG-CTGTAAAA-TCC--GGCGTC-ATGGCCTCAAAGCCCAGTTTCCAATATAAAGGTTATTCCAAGCAG-CTGTTTCCTG-A--TTATTTACGTGCAATAATTTTATAC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85364 320 - 21531802 GGAGATC--AGAGGAAGAAATAAAATCCGCAGGCCTCA-CCGGGGGTCCCGA------------------AGAGCAGCCTTTGCCTGGGG-CCCTCA-CGC-AGATCCCCGC-GTCAC-AGGGCAC---CGCAGT--CCCTATTAC-CATAAGCGATAATA-CAGA-AGTGTGATAAAA-GCCGT-CTGTCGTTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GCCA-TAAGCCAGCCCGGGG-CTCAGCCAAGAAACAG-CTGTAAAA-TCC--GGCGTC-ATGACCTCAAAGCACAGTTTCCAATATAAAGGTTATTCCAGGCAG-CTGTTTCCTG-A--TTATTTACGTGCAATAATTTTACAC-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 109794 320 - 2515279 GGAGATC--AGAGGAAGAAATAAAATCCTCAGGCCTCA-CCTGGGGTCCCGA------------------AGAGTAGCCTTTGCCCGGGG-CCCTCA-CGC-AGATCCCTGC-ATTGC-AGGGCAC---CGCAGT--CCCTATTAC-CATAAGCGATAATG-CAGA-AGTGTGATAAAA-GCCGT-CTGTCGTTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GCCA-TAAGCCAGCCCGGGG-CTCAGCCAAGAAACGG-CTGTAAAA-TCC--GGCGTC-ATGGCCTCAAAGCCCAGTTTCCAATATAAAGGTTATTCCAAGCAG-CTGTTTCCTG-A--TTATTTACGTGCAATAATTTTATAC-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265131 320 + 6586416 GGAGATC--AGAGGAAGAAATAAAATCCTCAGGCCTCA-CCGGGGGTCCCGA------------------AGAACAGCCTTTGCCCGGGG-CCCTCA-GGC-AGATCCCCGT-GTCGC-AGGGCAC---CGCGGT--CCCTATTAC-CATAAGCGATAATG-CAGA-AGTGTGATAGAA-GCCGT-CTGTCGTTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GCCA-TAAGCCAGCCCGGGG-CTCAGCCAAGAAACGG-CTGTAAAA-TCC--GGCGTC-ATGGCCTCAAAGCACAGCTTCTAATATAAAGGTTATTCCAGGCAG-CTGTTTCCTG-A--TTATTTACGTGCAATAATTTTACAC-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146651704 330 - 204313951 GGAGGTC--AGAGGAAGAAATAACATCCTCAGGCCTCA-CATGGGATCCAGA------TTCAAGGCCCAAAGAGCAGACTTTGCCCGGGG-CACTCA-TGC-AGGTCCCCAT-GGCTC-A-GGCAC---TGCAGC---CCTATTAC-CATAAGCAATCATG-CAAA-AGTGTGATAAAA-GCCAT-CTGTCATTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GCCA-TAAGCCATCCTGGGG-CTCAGCCAAGAAATGG-CTATAAAA-TCC--TGCATA-ATGACCTCAAAGCACACTTTCCAATATAAAGGTTATTCTAGGCAG-CTGTTTCCAG-A--TTATTTATGTGCAATAACTTTACAC-- i calJac3.chr2 C 0 I 1 s saiBol1.JH378296 339918 330 - 2409723 GGAGATC--AGAGGAAGAAATAACATCCTCAGGCCTCA-CATGGGATCCAGA------TTCCAGGCCAGAAGAGCAGACTTTGCCCAGGG-CACTCA-CGC-AGGTCCCCAC-AGCTC-A-GACGT---CGCAGC---CCTATTAC-CATAAGTGATCATG-CAAA-GGTGTGATAAAA-GCCAT-CTGTCATTCATAAAATGTGATGAT-GCCTTTCT-GCAGA-GCCG-TAAGCCATCCTGGAG-CTCAGCCAAGAAATGG-CTATAAAA-TCC--TGCATA-ATGACCTCAAAGCACACTTTCCAACATAAAGGTTATTCTAGGCAG-CTGTTTCCAG-A--TTATTTACGTGCAATAACTTTACAC-- i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 474647 330 - 2125214 GGAGATC--AGTGGAAGAAATAACATCCTCAGGCCTCA-CATGGGATCCAGA------TTCAAGGCCAGAAGAGCAGACTTTGCCTGGGG-CACTCA-CGC-AGGTCCCCAC-GGCTC-A-GGCAC---TGCAGC---CCTATTAC-CATAAGTGATCATG-CAAA-GGTGTGATAAAA-GCCAT-CTGTCATTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GCCG-TAAGCCATCCTGGGG-CTCAGCCAAGAAATGG-CTATAAAA-TCC--TGCATA-ATGACCTCAAAGCATACTTTCCAATATAAAGGTTATTCTAGGCAG-CTGTTTCCAG-A--TTATTTACATGCAATAACTTTACAC-- i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 69028 330 + 376347 GGAGATC--AGAGGAAGAAATAACATCCTCTGGCCTCA-CATGGGATCCAGA------TTCAAGGCCGGAAGAGCGGACTTTGCCCGGGG-CACTCA-CAC-AGGTCCCCAC-GGCTC-A-GGCAC---CGCAGC---CCTATTAC-CGTAAGTGATCGTG-CAAA-GGTGTGATAAAA-GCCAT-CTGTCATTCATAAAATGTGATGAT-GCCTTTCT-GCAAA-GCCG-TCAGCCATCCTGGGG-CTCAGCCAAGGAATGG-CTGTAAAA-TCC--TGCATA-ATGACCTCAAAGCACACTTTCCAATATAAAGGTTATTCTAGGCAG-CTGTTTCCAG-A--TTATTTATGTGCAATAACTTTACAA-- i aotNan1.NW_018514293v1 T 61979 I 1 s otoGar3.GL873611 2210199 333 - 8137123 GAATATT--AGTGTGAGAACCGAAGCCCG-AGGCACCA-CACAGGGTCCCTA------TCCCAGGCCAG-ACAGCAGACTTAGCCCAAGGCCACTGA-CCC-AGGTGCCCAC-ATCTCTAGGGCATCTGCACAGT---CCTATTAA-CATACGAGATAATG-CAAA-GGTGTGATAAAA--CCAT-CTGTCACTCATGAAATGTGATGTT-GCCTTTCT-GTAGA-GCCA-TAAGCCACACTGGGG-CTCAGCGGAGAACTGG-CCATAAAA-TTC--TGCATA-ATGACCTCAAGGCAGACTTTCCAATATAAAGAATCTTCTAGGCAG-CTGTTCCAAG-A--TTATTTATGTGCAATGATCTTGCCC-- i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61014970 338 - 77573801 -GAAAAC--AGAGTGGGAAATGAA--CCTCAG---TCA--GTGTGGTCCAGGGACCTCGTCAAGGCCAGGCCTGCAGGCTGTGCCCGCTG-TACCCG-CTC-AGGTGCCCAAGGCCAC-AGGGCAT---CGCCACGGCCCTATTAC-CATAAGCAATAATG-CAGA-GGTGTGATAAAA-GCCAT-CTGTCATTCATAAAAGGTGATGTC-GCCTTTTT-GCAAA-ACCA-TAAGTCATCCTGGGG-CTCAGCCAAGAAATGGCCCATAAAA-TCC--TGAGTA-ATGGCCTCAAAGCATACTTTTCAATATAAAGAATATTCTAGGCAG-CTGTTTCTAG-AACTTATCTGTGTGCAGTAATTTTATAC-C i canFam3.chr6 C 0 C 0 a score=418066.000000 s hg38.chr7_KI270899v1_alt 110523 61 + 190869 CCCCAGACTCTGAC-ACGCTCACAGCCTGACGC------------CCTCTCTCATCAGCAGCACT-GAAG-CGTCT s panTro5.chr7_NW_015973501v1_random 8696 63 - 19153 ACCCAGACTCTGAC-ACGCTCACAGCCTGACGC------------CTCATCTCATCAGCAGCACTCGAAGCCGTCT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71649 61 - 432965 CCCCAGACTCTGAC-ACGCTCACAGCCTGATGC------------CCTCTCTCATCAGCAGCACT-GAAG-CGTCT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33979310 61 + 185818997 TCCCAGACTCTGAC-ACGCTCATGGCTTGACGC------------CCTCTCCCATCAGCCGCACT-GAGG-CGTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595647 61 + 192294377 TCCCAGACTCTGAC-ACGCTCATGGCTTGACGC------------CCTCTCCCATCAGCCGCACT-GAGG-CGTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356908 61 - 9440265 TCCCAGACTCTGAC-ACGCTCACGGCTTGACGC------------CCTCTCCCATCAGCCGCACT-GAGG-CGTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16949641 61 - 21915920 TCCCAGACTCTGAC-ACACTCACGGCTTGACGC------------CCTCTCCCATCAGCCGCACT-GAGG-CGTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85684 61 - 21531802 CCCCAGACTCTGAC-ACGCTCACAGCTTGACGC------------CTTCTCCCATCAGCCGCACT-GAGG-CATCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 110114 61 - 2515279 TCCCAGACTCTGAC-ACACTCACGGCTTGACGC------------CCTCTCCCATCAGCCGCACT-GAGG-CGTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265451 61 + 6586416 CCCCAGACTCTGAC-AGACTCACAGCTTGACGC------------CCTCTCCCATCAGTGGTGCT-GAGG-CGTCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146652035 61 - 204313951 CCCCAGACTCTGAC-GTGCTCACAGTCTGACAC------------CCTGTCTCATCTGTAGCACT-GAAG-GATCT i calJac3.chr2 I 1 C 0 s saiBol1.JH378296 340249 61 - 2409723 ACCCAGACTCTGAC-GTGCTCACAGTTTGACAC------------CCTGTCTCATCTGTGACACT-GAAG-GGTCT i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 474978 61 - 2125214 CCCCAGACTCTGAC-GTGCTCACAGTCTGACAC------------CCTGTCTCATCTGTAGCACT-GAAG-GGTCT i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 69359 61 + 376347 CCCCAGACTCTGAC-GTGCTCACAGTCTGACAC------------CCTCTCTCATCTGCAGCACT-GAAG-GGTCT i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2210533 36 - 8137123 -------------------CCGTGGTCTGGCAG------------CC-------TTAGCAGCACT-GAAG-TGTCt i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61015308 72 - 77573801 --CAAAACAATTACTGGGCTCAGTGTCTGATGCACCCCTTCAGCACCCCCCTCATTAGCAGCAGT-AAAG-TGTCT i canFam3.chr6 C 0 I 2001 e nomLeu3.chr20 195984 68469 + 85365473 T a score=1974332.000000 s hg38.chr7_KI270899v1_alt 110584 381 + 190869 GTGCGg-aattctt-acgatgtcgtgttccctcagcacc-ca-tt-----------tggggctttgtcctcccagaatcggggctcagtcaccct-tgacac-agtttccagttctctgccttcccccagtatctc--agggtggtccctccaga-cacctgccttactcag-acg-tctcctggtgacca-ccccgc-tatgggacagcc-cacaggactcgcccagaccccacaccctgcaaggactgtgtag-ctgtcccaca----gcaga---cccctcccagttccagtg----tgacctc-gtggggctgtggcccactggc--tgagtgcacc--ca-ccagagcttcc-tgtg-ggaacctgcttgggcaataccc------------------tggaccccag-tgaaggctttgaccacagcccctgtccctct s panTro5.chr7_NW_015973501v1_random 8759 415 - 19153 -TGCGGTaattcttgacgatgtcgtgcttcctcaacacctcattt-----------tgcggctttgtcgt-ccagaatcggggctcagtcaccctataacactagtttcagcttctctgcctccccccagtatctccaaaggtggtccctccagagcacctgccttactcagaacgctctcctgg-gacca--cccac-tat-ggacagcctcacaggactcgcccagaccccacaccctgcaaggactgtgtagcctgtcgctcaccagccaga---cccctcccagttccagtg----tgacctctgtgtggctgatggccactggc---gagtgcacccaca-ccagagcttccttgtgcggaacctgctt-ggcaataccctggacccgcgtgaaggcttggaccccagctgaaggctttgaccacagcccctgtccctct i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 71710 381 - 432965 GTGCGg-aattctt-acgatgtcgtgttccctcagcacc-ca-tt-----------tggggctttgtcctccaagaatcagggctcagtcaccct-tgacac-agtttccagttctctgcctccgcccagtatctc--agggtggtccatccaga-cacctgccttactcag-acg-tctcctggtgacca-ccccgc-tatgggacagcc-cacaggactcacccagaccccacaccgtgcaaggactgtgtag-ctatcccaca----gcaga---cccctcccag-tccagtg----tgacttc-atggggctgtgtcccactggctctgagtgcac---ca-ccagagcttcc-tgtg-ggaacctgcttgggcaataccc------------------tggaccccag-tgaaggctttgaccacagcccttgtgcctct i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33979371 325 + 185818997 GTGCGg-aattctt-acaacgttgcactccctcagcagc-ct-tc-----------tggggctttgtcctcccagagtcggggttcagtcaccct-tgacac-agtttccagttctctgcctacccccagtatctc--agggtggtccctccaga-cacctgcctttcgcgg-act-cctcctggtaacca-ccccca-tacaggacagcc-cacaggactcgcccagacctcacaccctggtgggaccgcgagg-ctatcccact----gcaga---cccctcccagtcccagcg----tgacccc-ctggGGTC---------------TGAGTGCAC---CA---------------------------------------------------------------cccag-tgaaggcttccgccacagcccctgtccctct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595708 325 + 192294377 GTGCGg-aattctt-acaacgttgcactccctcagcagc-ct-tc-----------tggggctttgtcctcccagagtcggggttcagtcaccct-tgacac-agtttccagttctccgcctacccccagtatctc--agggtggtccctccaga-cacctgcctttcgcgg-act-cctcctggtaacca-ccccca-tacaggacagcc-cacaggactcgcccagacctcacaccctggtgggaccgcgagg-ctatcccact----gcaga---cccctcccagtcccagcg----tgacccc-ctggGGTC---------------TGAGTGCAC---CA---------------------------------------------------------------CCCAG-TGAAGGCTTCCGCCACAGCCCCTGTccctct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4356969 325 - 9440265 GTGCAg-aattctt-acaacgttgcactccctcagcagc-ct-tc-----------tggggctttgtcctcccagagtcggggttcagtcaccct-tgacac-agtttccagttctccgcctacccccagtatctc--agggtggtccctccaga-cacctgcctttcgcgg-act-cctcctggtaacca-ccccca-tacaggacagcc-cacaggactcgcccagacctcacaccctggtgggaccgcgagg-ctatcccact----gcaga---cccctcccagtcccagcg----tgacccc-ctggggtc---------------tgagtgcac---ca---------------------------------------------------------------cccag-tgaaggcttcggccacagcccctgtccctct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16949702 326 - 21915920 GTGCGg-aattctt-acaacgttgcactccctcagcagc-ct-tc-----------tggggctttgtcctcccagagtcggggttcagtcaccct-tgacac-agtttccagttctccgcctccccccagtatctc--agggtggtccctccaga-cacctgcctttcgcag-act-cctcctggtaaccaccccccg-tacaggacagcc-cacaggacttgcccagacctcacaccctggtaggaccgcgagg-ctatcccact----gcaga---cccctcccagtcccagcg----tgacccc-CTGGGGTC---------------TGAGTGCAC---CA---------------------------------------------------------------cccag-tgaaggcttcggccacagcccctgtccctct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 85745 368 - 21531802 GCGCGg-aattctt-acgacgtcgtactccctcagcagc-ct-tt-----------cggggctttgtcctcccagagtcggggttcagtcaccct-tgacac-agtttccagttctctgcctccccccagtatctc--agggtggtccctccaga-tacctgcctttcgcgg-act-cctcctggtaacca-cccccc-tacgggacagcc-cacaggactcgcccagacctcacaccctgcaaggaccgcgcgg-ctatccccca----gcaga---cccctcccagtcccagcg----tgacccc-ctggggtc---------------tgagtgcac---cacccagagctccc-tgtg-ggaacctgcttgggcaatgccc------------------tggaccccag-tgaaggcttcggccacagcccctgtccctct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 110175 326 - 2515279 GTGCGg-aattctt-acaatgttgcactccctcagcagc-ct-tc-----------tggggctttgtcctcccagagttggggttcagtcaccct-tgacac-aatttccagttctccgcctccccccagtatctc--agggtggtccctccaga-cacctgcctttcgcgg-act-cctcctggtaacca-ccccccgtacaggacagcc-cacaggacttgcccagacctcacaccctggtaggaccgtgagg-ctatcccact----gcaga---cccctcccagtcccagcg----tgacccc-ctggGGTC---------------TGAGTGCAC---CA---------------------------------------------------------------cccag-tgaaggcttcggccacagcccctgtccctct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265512 344 + 6586416 GTGCGg-aattctt-acgacgctgtactccctcagcagc-ca-tc-----------tggggctttgtcctcccagagtcggggttcagtcaccct-tgacac-agtttccagttctccgcctcccccccgtatctc--agggtggtccctccaga-cccctgtctttctcgg-act-cctcctggtaacca--ccccg-tacgggacggcC-CACAGGACTCACCCAGAACTCACGCCCCGCAAGGATCACGCGG-CTATCCCCCA----GCAGACCCCCCCCCCCAGTCCCAGGG----TGATCTC-CTGGGGTC---------------TGAGTGCAC---CACCCAGAGCTccc-tgga-c--------------------------------------------cccag-tgaagtcttcggccatagcccctgtccctct i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146652096 379 - 204313951 GTGTGg-aattctt-acaacactgtattccctcagcaca-ca-tt-----------ttgggctttgtcctcccagaatcaggacttagtcaccct-tgacac-tcgttctagttttccaccacgccgaaatttctc--agggtggtccatccaga-aacctgccttacacag-atg-cctcctgatgacca-ctctgc-tatgggacagcc-cacaggacacacttagatcccatgccctgtgaggactgggctg-ctatttcaca----gcaga---cccctcctggtcccaagg----tgacctc-ctggagctgtgtcccactggc--ttagagcac---ct---agagctccc-tgtgggaaacctgcttgggtaataccc------------------tggaccccag-tgaaggcttcggccacagttcctgtctctct i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 340310 376 - 2409723 GTGTGg-aattctg-acgatgctgtatttcctcagcacc-ca-tt-----------ttgggctttgtcctcccagaatcagggctcagtcaccct-tgacac-tgtttccagttctctactgccccacagtttctc--agggtggtccgtccaga-aacctgccttacgcag-atg-cctcctggcaacca-ccttgc-tatgggacagct-cacaggatgcacctagaccccacgccctgcaaggactgggccg-ctgtcccaca----gcaga---cccctcccagtccccggg----tga---c-ctgggcccgtgccccactgcc--tctgaaccc---ct---ggagctccc-tgtgggaaacctgcttaggtaataccc------------------tggaccccag-tgaaggcttcagccacagtccctgtccctct i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 475039 379 - 2125214 GTGCAg-aattctt-acgacgctgtattccctcagcact-ca-tt-----------ttgggctttgtcctcccagaatcagggctcagtcgccct-tgacac-tatttccagttctccactgccctgcagtttctc--agagtggcccatccaga-aacctgccttacacag-atg-cctcctggtgacca-ccttgc-tacgggacagtc-cacaggacgcacctaaaccccacgccctgcaaggactgggctg-ttatcccaca----gcaga---cccctcccggtccccggg----tgacctc-ctggggctgtgccccactggc--tctgaacac---ct---ggaactccc-tgtgggaaacctgcttaggtaataccc------------------tggacaccag-tgaaggttttggccacagtccctgtccctct i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 69420 378 + 376347 GTGCGg-aattctt-acgatgctatattccctcagcacc-ca-tt-----------ttgagttttgtcctcccagaatcagggctcagtcaccct-tgacac-tg-ttccagttctccactgccctgcagtttctc--agggcggtccatccaga-aacctgccttacacgg-atg-cctcctggcaacca-ccttgc-tacgggacagcc-cacaggatgcacctagaccccatgccctgcaaggactgggcca-ctatctcaca----gcaga---cccctcccggtccccggg----tgacctc-ctggggccgtgccccactggc--tctgagcac---ct---agagctccc-tgtgggaaacctgcttgggtaatatcc------------------tggaccccag-tgaaggcttcggccacagtccctgtccctct i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2210569 346 - 8137123 gcagtg-aattctc-attatgtcacgaggcctcggcgct-ca-tttttagtctaagttggacttccccacaccagaagggggacccagcagccct-ggacac-agtttcttattctttacctcttcccagcacctc--agccaggtgcatccaga-------------tctg-cta-cctcctggtgacca-ctaccc-tatgggacagct-ta-agca---------atctcgtaccccacaaagaatgtgcag-acctaccaca----gc-ga---ccctt---agtcccatgactgctggctcc-ttgagaat---------------gaaacccac---ca-tgagaactcct-catgggaaacctgcta-------acca------------------gggaccccag-----gattcaccccaccgactctctctctct i otoGar3.GL873611 C 0 I 854 e canFam3.chr6 61015380 2001 - 77573801 I e nomLeu3.chr20 195984 68469 + 85365473 T a score=193349.000000 s hg38.chr7_KI270899v1_alt 110965 38 + 190869 ggctg----tgtgcgtccaagacagcgcc--ccgttcccacca------c s panTro5.chr7_NW_015973501v1_random 9174 46 - 19153 agctg----tgtgcgtccaagacagcgcccgccgttccccacacacggcc i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 72091 38 - 432965 ggctg----tgtgcgtccaagacagcacc--ccgttcccacca------c i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33979696 42 + 185818997 cgctgagtgtgtgcatccaagagagcacc--cccttcccacca------c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596033 42 + 192294377 cgctgagtgtgtgcatccaagacagcacc--cccttcccacca------c i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357294 42 - 9440265 ggctgagtgtgtgcatccaagacagcacc--cccttcccacca------c i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950028 42 - 21915920 ggctgagtgtgtgcatccaagacagcacc--cccttcccacca------c i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86113 41 - 21531802 ggctgagtatgtgcattcgagacagca-c--ctcttcccacca------c i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 110501 42 - 2515279 ggctgagtgtgtgcatccaagacagcacc--cccttcccacca------c i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265856 42 + 6586416 ggctgagtgtgcgcatccaagacagcacc--cccttcccacca------c i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146652475 34 - 204313951 ggctaagtgt--------aagatggcacc--cccttcccacca------a i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 340686 34 - 2409723 ggctaagtgc--------aagacggcact--cccttcccacca------g i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 475418 34 - 2125214 GGCTAAGTAT--------AAgatggcacc--cccttcccacca------g i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 69798 34 + 376347 ggctaagtgt--------aagacggcacc--ccctttccacca------g i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2210915 854 - 8137123 I e canFam3.chr6 61015380 2001 - 77573801 I e nomLeu3.chr20 195984 68469 + 85365473 T a score=2276307.000000 s hg38.chr7_KI270899v1_alt 111003 392 + 190869 cagccctgcgagggggctgccctcttctctctggatctgtgagtcacgc--tgttaactc-------cagca-ttttgtggagttgccacctgagtc--tcacctgactggcac-acct-caacccacctc-tcctc-ccgtc--ggcgtggtcctttg-gcgt-ggct-gtcttggctggaataaactgcatgcaggtgtcag-cc------agtctcctgtgacagggacactcgg-tcccgggtcg-gacacctcggccttaggccgtccac---caggaca-aagaagGGCCGACCTCTGGA-----ACCCCAGGTTAGTCGCCTGG-AAAAGGGAG-GAACGGT-CA---CCA--CGAC-ACTGCCCCTGCC--CGCAGCTTAGGG-ACGTttctgag-gtaa-acgagataat--ggttgga-gtgtt-gagcacagtctggc s panTro5.chr7_NW_015973501v1_random 9220 426 - 19153 tagccctgcaagggggctccctacttctctctggat-tgtgagtcacgctgtgttaactc-------cagcgtttttgtggagttgccacctgagttcgtcacctgactggcacgacctaaaaaccacctcgtcctcaccgtcaaggcgtggtcctttgagcgtgggctggtcttggttggaataaa-tgcatgcaggtgtcagccc------agtctcctgtgacagggacactcggattcctggtcgccacacctcg--cttaggccgtccacgcacaggacataagaagGG-CGACCTCTAGGCTTTCACCCAGGCTTAGTCGCCTGGCAAAAGGGAGAGAACGGTCCA---CCAGCTGACGACTGCCCCTGCCCTCACAGCTTAGGGCACGTTTCGGAGCGTAACACGAGATAAG--GGTTGGAGGTGTTCGAGCACAGTCTGGC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 72129 392 - 432965 cagccctgcaagggggctgccctcttccctctggatctgtgagtcacgc--tgttaactc-------cagtg-ttttgtggagttgccacctgagtc--tcacctgactggcac-acct-caacccacctc-tcctc-ccgtc--agcgtggtcctttg-gcgt-ggct-gtcttggttggaataaactgcatgcaggtgtcaa-cc------agtctcctgtgacagggacacccgg-tcccgggtcg-gacaccttggccttaggccgtccac---caggaca-aagaagGGCCGACCTCTGGA-----AACCCAGGTTAGTCGCCTGG-AAAAGGGAG-GAATGGT-CA---CCA--CGAC-ACTGCCCCTGCC--CCCAGCTTAGGG-ACGTTTCTGAG-GTAA-ACGAGATAAT--GGTTGGA-GTGTT-GAGCACAGTCTGGC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33979738 383 + 185818997 cagccctgcaagggggctgccctcttctctctggatgtgtgagtcacgc--tgttaacgc-------cagtg-ttttgtggagttgccatctgagcc--tcacctgaccggcac-acct-gaacccgcctc-tcctc-ccggc--agcgcagtcctttg-gcgt-ggct-gtcttggtaggaataacctgcatgccggtgtcag-cc------agtctcctgtgacagggac-------cgccgagtcg-gacacctcg-cccttggccgtccac---gaggaca-gagaagGGCCAACCTCTGGA-----GCCCCAGGTTAGTGGCCTGG-ACAAGGGAG-GAATGGT-CA---CCC--CGAC-ACGGCCGCTGCC--CCC--CTTAGGG-ACGTTTCCGAG-GTAA-ACGAGATAAC--GGTTGGA-GTGTT-GAGCTCAGCCTGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596075 389 + 192294377 cagccctgcaagggggctgccctcttctctctggatgtgtgagtcacgc--tgttaacgc-------cagtg-ttttgtggagttgccatctgagcc--tcacctgaccggcac-acct-gaacccgcctc-tcctc-ccggc--agcgcagacctttg-gcgt-ggct-gtcttggtaggaataacctgcatgccggtgtcag-cc------agtctcctgtgacagggacacccgg-tcccgagtcg-gacacctcg-cccttggccgtccac---gaggaca-gagaagGGCCGACCTCTGGA-----GCCCCAGGTTAGTGGCCTGG-ACAAGGGAG-GAATGGT-CA---CCC--CGAC-ACGGCCGCTGCC--CCC--CTTAGGG-ACGTTTCCGAG-GTAA-ACGAGATAAC--GGTTGGA-GTGTT-GAGCTCAGCCTGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357336 389 - 9440265 cagccctgcaagggggctgccctcttctctctggatgtgtgagtcacgc--tgttaacac-------cagtg-ttttgtggagttgccatctgagcc--tcacctgaccggcac-acct-gaacccgcctc-tcctc-ccggc--agcgcagtcctttg-gcgt-ggct-gtcttggtaggaataacctgcatgccggtgtcag-cc------agtctcctgtgacagggacacccgg-tcccgagtcg-gacacctcg-cccttggccgtccac---gaggaca-gagaagGGCCGACCTCTGGA-----GCCCCAGGTTAGTGGCCTGG-ACAAGGGAG-GAACGGT-CA---CCC--CGAC-ACGGCCGCTGCC--CCC--CTTAGGG-ACGTTTCCGAG-GTAA-ACGAGATAAC--GGTTGGA-GTGTT-GAGCTCAGCCTGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950070 388 - 21915920 cagccctgcaagggggctgccctcttctctctggatgtgtgagtcacgc--tgttaacgc-------cagtg-ttttgtggagttgccatctgagcc--tcacctgaccggcac-acct-gaacccgcctc-tcctc-ccgtc--agcgcagtcctttg-gtgt-ggct-gtcttggtaggaataacctgcatgccggtgtcag-cc------agtctcctgt-acagggacacccgg-tcccaagtcg-gacacctcg-cccttggccgtccac---ggggaca-gagaagGGCCGACCTCTGGA-----GCCCCAGGTTAGTGGCCTGG-AGAAGGGAG-GAACGGT-CA---CCC--CGAC-ACAGCCGCTGCC--CCC--CTTAGGG-ACGTTTCCGAG-GTAA-ACGAGATAAC--GGTTGGA-GTGTT-GAGCTCAGCCTGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86154 389 - 21531802 cagccctgcaagggggctgccctcttctctctggatgtgtgagtcacgc--cggtaacgc-------cagtg-ttctgtggagttgccgtctgagcc--tcacctgaccggcac-accc-gaacccgcctc-tcctc-cagtc--agtgcagtcctttg-gcat-ggct-gtcttggtaggaaaaacctgcatgccggtgtcag-cc------agcctcctgggacagggacacccgg-tcccgagccg-gacacctcg-ccttaggccgtccac---gaggaca-gagaagGGCCAACCTCTGGA-----GCCCCAGGTTAGTGGCCTGG-AGAAGGGAG-GAACGGT-CA---CCC--CGAC-ACGGCCCCTGCC--CCC--CTTAGGG-ACGTTTCCGAG-GTAA-ACGAGATAAC--GGTTGGA-GGGTT-GAGCTCAGCCTGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 110543 389 - 2515279 cagccctgcaagggggctgccctcttctctctggatgtgtgagtcacgc--tgttaacgc-------cagtg-ttttgtggagttgccatctgagcc--tcacctgaccggcac-acct-gaacccgcctc-tcctc-ccgtc--agcgcagtcctttg-gcat-ggct-gtcttggtaggaataacctgcatgccggtgtcag-cc------agtctcctgtgacagggacacccgg-tcccgagtca-gacacctcg-cccttggccgtccac---gaggaca-gagaaTGGCCGACCTCTGGA-----GCCCCAGGTTAGTGGCCTGG-AGAAGGGAG-GAACGGT-CA---CCC--CGAC-ACGGCCCCTGCC--CCC--CTTAGGG-ACGTTTCCGAG-GTAA-ACGAGATAAC--GGTTGGA-GTGTT-GAGCTCAGTCTGGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 265898 389 + 6586416 cagccctgcaagggggctgccctcttctctctggatgtgtgagtcacgc--tgttaactc-------cagtg-ttttgtggagttgccatctgagcc--tcacctgaccggcac-acct-gaacccgcccc-tcctc-ccgtc--agtgcagtcctctg-gcat-ggct-gtcttggaaggaataacctgcatgcaggtgtcag-cc------agtctcctgtgacagggacactggg-tcccgagtcg-gacacctgg-cctcaggccgtccac---gaggaca-aagaagGGCCGACCTCTGGA-----ATCGCAGGTTAGTTGCCTGG-AGAAGGGAA-GAACGGT-CA---CCC--CGAC-ACGGCCCCTGCC--CCC--CTTAGGG-ACGTTTCCGAG-GTAA-ACGAGATAAC--GGTTGGA-GTGTC-GAGCTCAGCCTGGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146652509 371 - 204313951 cagccctgcaaggtggctgccctcttct-tctgggtctgtgagttacac--tattatctc-------cagtg-ttctgtggagttgccacctgagtt--tcccctgactgggac-acct-gaacccacctc-tcctc-ccatc--agtgctgtcctatg-gcat-ggtt-gtctaggtaggaatgaac---aggcaggcattag-cc------agtcttctgggacagggacacctgg----------g-----------ccttaagccatccaa---caggaca-aagaagGGCCaaccactgga-----accccaggttatccacctgc-aaaaatgag-gagctgt-ga-ccccc--caat-gctgtccctgcc--cccagcttaggg-gcatttctgag-gtaa-atgagataat--gGTTGGA-GTCTT-GAACATAGCCTAGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 340720 373 - 2409723 cagccctgcaaagtggctgccctcttct-tccaggtctgtgagtcacac--tgttatctc-------cagtg-ttctgtggagttgccgcctgagtc--tcccctgactgggac-acct-gaacccacctc-tcctc-ccatc--agtgccatcctac--acat-ggtt-gtctagataggaataaactataggcaggcattag-cc------agtcttctgtgacagggacacctgg----------g-----------cctcaggccatccac---caggaca-aagaagGGCCAACCGCTGGA-----ACCCCAGGTTAGCCACCTGT-AAAAATGAG-GAGCCAT-CA-CCCCC--TGAT-GCTGTCCCTGCC--ACCAGCTTAGGG-ACATTTCTGAG-GTAA-ATGAGATAAT--GGTTGGA-GTCTT-GAGCATAGCCTAGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 475452 374 - 2125214 cagccctgcaaggtggctgccctcttct-tctgggtctgtgaatcacac--tgttatctc-------cagtg-ttctgcagagttgccacctgagtc--tcccctgactgggac-acct-gaacccacctc-tcctc-ccatc--agtgctatcctac--gcat-ggct-gtctagataggaataaactgcaggaaggcattag-cc------agttttctgtgacagggacacctgg----------g-----------ccttaggccatccac---caggaca-aagaagGGCCAACCACTGGA-----ACCCCAGGTTAGCCACCTGT-AAAAATTAG-GAGCTGT-CACCCCCC--CAAT-GCTGTCCCTGCC--CCAAGCTTAGGG-ACATTTCTGAG-GTAA-ATGAGATAAT--GGTTGGA-GTCTT-GAGCATAGCCTAGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 69832 379 + 376347 tggccctgcaaggcggctgccctcttct-tctgggtctgtgagtcacac--tgtcatctc-------cagtg-tcctgtggagttgccgcctgagtg--tcccctgactgggac-acct-gaacccacctc-tcctc-ccatc--agtgctgtcctacg-gcat-ggct-gtctaggtaggaataaactgcaggcaggcatcag-ccacaattaaacttctgtgacagggacacctgg----------g-----------ccttaggccatccac---caggaca-aagaagGGCCAACCACTGGA-----ACCCCAGGTTAGCCACCTGT-GAAAAGAAG-GAGCCG--CA-CCCCC--CAAT-GCTGTCCCTGCC--CCCAGCTTAGGG-ACGTTTCTGTG-GTAA-ATGAGATAAT--GGTTGGA-GTCTT-GAGCACAGCCTGGC i aotNan1.NW_018514293v1 C 0 I 1520 s otoGar3.GL873611 2211769 280 - 8137123 cagcccagcca---ggctgcccccttctcccgggatctctagggcat-c--tgccgcttcagtgtctcagtg-ttctgttgggttgtgacctttgtcgctcactagattgacat-gtct-gaacctaattt-tcctc-cAATC--A--------------GCAA-GCCA------------------------------------CA------GGT-----------GGGACACTGAG----------G-GA----------------------------------GAAAAgagcctgagcct-ga-----gcctgagcctga--gcctga------gctc-tgaTTGC-CA---CCC--CAGC--CTGCCCCTGCC--TAG--TGCAGGG-ATGCGTCAGAA-GTAC-CGGACATGACAGAGTTAGG-GTCTT-TAC----------- i otoGar3.GL873611 I 854 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e nomLeu3.chr20 195984 68469 + 85365473 T a score=62437.000000 s hg38.chr7_KI270899v1_alt 111395 9 + 190869 cacagagaa s panTro5.chr7_NW_015973501v1_random 9646 9 - 19153 CACAGAGAA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 72521 9 - 432965 CACAGAGAA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33980121 9 + 185818997 CACAGAGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596464 9 + 192294377 CACAGAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357725 9 - 9440265 CACAGAGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950458 9 - 21915920 CACAGAGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86543 9 - 21531802 CACAGAGAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 110932 9 - 2515279 CACAGAGAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266287 9 + 6586416 CACAGAGTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146652880 9 - 204313951 TGCAGATAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 341093 9 - 2409723 TGCAGAGAA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 475826 9 - 2125214 TGCAGAGAA i cebCap1.NW_016107703v1 C 0 I 1767 s otoGar3.GL873611 2212049 9 - 8137123 CACAGAGGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 70211 1520 + 376347 I e nomLeu3.chr20 195984 68469 + 85365473 T a score=45004.000000 s hg38.chr7_KI270899v1_alt 111404 10 + 190869 -cgTGAGAAGC s panTro5.chr7_NW_015973501v1_random 9655 10 - 19153 -TGTGAGAAGC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 72530 10 - 432965 -TGTGAGAAGC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33980130 10 + 185818997 -CGTGAGAAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596473 10 + 192294377 -CGTGAGAAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357734 10 - 9440265 -CGTGAGAAGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950467 10 - 21915920 -CGTGAGAAGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86552 10 - 21531802 -CGTGACAAGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 110941 10 - 2515279 -CGTGAGAAGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266296 10 + 6586416 -CGTGAGAAGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146652889 10 - 204313951 -GGCAAGAAAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 341102 10 - 2409723 -GGCAAGAAAC i saiBol1.JH378296 C 0 I 2002 s otoGar3.GL873611 2212058 11 - 8137123 CGTTTGGCAAC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 70211 1520 + 376347 I e cebCap1.NW_016107703v1 475835 1767 - 2125214 I e nomLeu3.chr20 195984 68469 + 85365473 T a score=70978.000000 s hg38.chr7_KI270899v1_alt 111414 17 + 190869 ------CATTGCCAG-TGTC--ATCA s panTro5.chr7_NW_015973501v1_random 9665 17 - 19153 ------GATTGCCAGTTGTC--AT-A i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 72540 17 - 432965 ------CATTGCCAT-TGTC--ATCA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33980140 17 + 185818997 ------CATTGCCAT-CATC--ATCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596483 17 + 192294377 ------CATTGCCAT-CGTC--ATCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357744 17 - 9440265 ------CATTGCCAT-CGTC--ATCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950477 17 - 21915920 ------CATTGCCAT-CATC--ATCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86562 11 - 21531802 ------CATT-------GTC--ATCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 110951 17 - 2515279 ------CATTGCCAT-CGTC--ATCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266306 17 + 6586416 ------CATTGCCAT-TGTC--ATCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146652899 15 - 204313951 ------CATCTCCAC-TGtc----ca i calJac3.chr2 C 0 C 0 s saiBol1.JH378296 343114 17 - 2409723 ------CATTGCCAC-TGTC--ATCA i saiBol1.JH378296 I 2002 C 0 s cebCap1.NW_016107703v1 477602 17 - 2125214 ------CATTGCCAC-TGTC--ATCA i cebCap1.NW_016107703v1 I 1767 C 0 s otoGar3.GL873611 2212069 25 - 8137123 TGTTGCTATTTCCAT-TATCTCATCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 70211 1520 + 376347 I e nomLeu3.chr20 195984 68469 + 85365473 T a score=104399.000000 s hg38.chr7_KI270899v1_alt 111431 16 + 190869 TG-TGG-TAATTGGGAAG s panTro5.chr7_NW_015973501v1_random 9682 17 - 19153 TG-TGGCTAATTGGGAAG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 72557 16 - 432965 TG-TGG-TAATTGGGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33980157 16 + 185818997 TG-TGA-TGATCGGGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596500 16 + 192294377 TG-TGA-TGATCGGGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357761 16 - 9440265 TG-TGA-TGATCGGGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950494 16 - 21915920 TG-TGA-TGATCGGGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86573 16 - 21531802 TG-TGA-TGATCGGGAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 110968 16 - 2515279 TG-TGA-TGATCGGGAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266323 16 + 6586416 TG-TGA-CGATCGGGAAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chr2 146652914 17 - 204313951 tgctca-tggttaggaag i calJac3.chr2 C 0 N 0 s saiBol1.JH378296 343131 16 - 2409723 TG-TGA-TAATTGGGAAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 477619 16 - 2125214 TG-TGA-TAATTGGGAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 71731 16 + 376347 TG-TGA-TAATTGGGAAG i aotNan1.NW_018514293v1 I 1520 C 0 s otoGar3.GL873611 2212094 16 - 8137123 TT-TAG-GAATTACTAAG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e nomLeu3.chr20 195984 68469 + 85365473 T a score=265445.000000 s hg38.chr7_KI270899v1_alt 111447 53 + 190869 --TTTCCGTGAACCG---CTGCAGCAGGGA-GTTTAA------AG-AAGATCAGCAGAGGCCAAAG s panTro5.chr7_NW_015973501v1_random 9699 57 - 19153 ---TTCCGTGACCCGAATGCGCAGCAGGGAGGTTTAA------AGCAAGATCAGCAGAGGCCAAAG i panTro5.chr7_NW_015973501v1_random C 0 I 485 s gorGor5.CYUI01015914v1 72573 53 - 432965 --TTTCCGTGAACCG---CTGCAGCAGGGA-GTTTAA------AG-AAGATCAGCAGAGGCCAAAG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33980173 52 + 185818997 --TTTCCGTGAACC----CTGCAACACTGA-GTTTAG------AG-GAGATCAGCAGAGGTCAAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596516 52 + 192294377 --TTTCCGTGAACC----CTGCAACACTGA-GTTTAG------AG-GAGATCAGCAGAGGTCAAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357777 52 - 9440265 --TTTCCGTGAACC----CTGCAACACTGA-GTTTAG------AG-GAGATCAGCAGAGGTCAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950510 52 - 21915920 --TTTCCGTGAACC----CTGCAACACTGA-ATTTAG------AG-GAGATCAGCAGAGGTCAAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86589 50 - 21531802 --TTTCCATGAACC----CTGCAACA--GA-GTTTAT------AG-GAGATCAGCAGAAGTCAAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 110984 52 - 2515279 --TTTCCGTGAACC----CTGCAACACTGA-GTTTAG------AG-GAGATCAGCAGAGGTCAAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266339 52 + 6586416 --TTTCCGTGAACC----CCGCAACAGTGA-GTTTAC------AG-GAGATCAGCAGAGGTCAAGG i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 343147 54 - 2409723 --TTTCCATGAAACA---TTGTGACAGTGA-GTTTAA------AATTAGGTCAGCAGAGGCCAAGG i saiBol1.JH378296 C 0 I 3 s cebCap1.NW_016107703v1 477635 54 - 2125214 --TTTCCATGAAACA---TTGCGACAGTGA-GTTTAA------AATTAGGTCAGCAGAGGCCAAGG i cebCap1.NW_016107703v1 C 0 I 3 s aotNan1.NW_018514293v1 71747 54 + 376347 --TTTCCGTGAAACA---TTGCGACAGTGA-GTTTAA------AATTAGGTCGGCAGAGGCCAAGG i aotNan1.NW_018514293v1 C 0 I 3 s otoGar3.GL873611 2212110 58 - 8137123 TGTTTCCAGGAGCCA---CAGAGACAGTGA-GCTTAGCATTATAG-AAGGTCAGCAGAGGTCA--- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e nomLeu3.chr20 195984 68469 + 85365473 T a score=145696.000000 s hg38.chr7_KI270899v1_alt 111500 53 + 190869 ACTCCTTAGCGGCAGGGAGGGGAGGGCAGAGAAGAAATCAGGTGGGGGAGGTC s gorGor5.CYUI01015914v1 72626 53 - 432965 ACTCCTTAGCGGCAGGGAGGGGAGGGCAGAGCAGAAATCAGGTGGGGGAGGTC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33980225 35 + 185818997 -ATCCTCAGAGGCAGGGAGGGG-----------------AGGTGGGGGAGGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596568 35 + 192294377 -ATCCTCAGAGGCAgggagggg-----------------aggtgggggaggtg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357829 35 - 9440265 -ATCCTCAgaggcagggagggg-----------------aggtgggggaggtg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950562 35 - 21915920 -ATCCTCAGCAGCAgggagggg-----------------aggtgggggaggtg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86639 35 - 21531802 -ATCCTCAGTGGCAGGGAGGGG-----------------AGTTGGGGGAGGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111036 35 - 2515279 -ATCCTCAGCGGCAgggagggg-----------------aggtgggggaggtg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266391 35 + 6586416 -ATCCTCaggggcagggagggg-----------------aggtgggggaggtg i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 343204 53 - 2409723 CCTTCTTAGCTGCAGGGAGGGGAGGGCAGAGCTGAAATCCGGTGGGTGAGGTC i saiBol1.JH378296 I 3 C 0 s cebCap1.NW_016107703v1 477692 53 - 2125214 CCTTCTTAGCTGCAGGGAGGAGAGGGCAGAGCCAAAATCCAGTGGGTAAGGTC i cebCap1.NW_016107703v1 I 3 C 0 s aotNan1.NW_018514293v1 71804 53 + 376347 CCTTCTTAGCTGCAGGGAGGGGAGGGCAGAGCTGAAATCTGGTGGGTAAGGGC i aotNan1.NW_018514293v1 I 3 C 0 s otoGar3.GL873611 2212168 33 - 8137123 --------------GGGAGGGG--GGCAGAGCAGA----AACTGGGAGAGCTT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e nomLeu3.chr20 195984 68469 + 85365473 T e panTro5.chr7_NW_015973501v1_random 9756 485 - 19153 I a score=273980.000000 s hg38.chr7_KI270899v1_alt 111553 47 + 190869 GAAGGGAAGTGGGAACGGCGGg-cacagacgtccctgagcccggatcc s gorGor5.CYUI01015914v1 72679 47 - 432965 GAAGGGAAGTGGGAACGGCGGG-CACAGACATCCCTGAGCCCGGATCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127515 47 + 85365473 GAAGGGAAGTGGGAGCGGCGGG-CACAGACGTCCCTGAGCCCGGATCC i nomLeu3.chr20 T 68469 C 0 s rheMac8.chr3 33980260 47 + 185818997 GAAGGGAAGTGGGAGCGGGGGGGCACAGACGTCCCTGAG-CCAGATCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596603 47 + 192294377 gaagggaagtgggagtgggggggCACAGACGTCCCTGAG-CCGGATCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357864 47 - 9440265 gaagggaagcgggagcgggggggCACAGACGTCCCTGAG-CCGGATCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950597 46 - 21915920 gaagggaagcggg-gagggggggCACAGACGTCCCTGAG-CTGGATCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86674 47 - 21531802 GAAGGGAAACGGGAGCGGGGGGGCACAGACGTCCCTGAG-CCGGATCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111071 47 - 2515279 gaagggaagcgggagcggggggaCACAGACGTCCCTGAG-CCGGATCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266426 46 + 6586416 gaagggaagtgggagcgggggg-CACAGACGTCCCTGAG-CTGGATCC i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 343257 47 - 2409723 AAAAGGAAGTGGGAGCAGCAGG-CACAAAAGTTCCTGAGCCCGGATCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 477745 47 - 2125214 AAAAGGAAGTGGGAGCAGCGGG-CACAAAAGTCCCTGAGCCCGGATCC i cebCap1.NW_016107703v1 C 0 I 45 s aotNan1.NW_018514293v1 71857 47 + 376347 AAAGGGAAGTGGGAGCAGCGGG-CAGAAAAGTCCCTGAGCCCGGATCC i aotNan1.NW_018514293v1 C 0 I 45 s otoGar3.GL873611 2212201 46 - 8137123 GAGGGGACATGGGAGCTGTGGG-CATAGATGTCCCCCGC-CTGGCCCC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e panTro5.chr7_NW_015973501v1_random 9756 485 - 19153 I a score=4664.000000 s hg38.chr7_KI270899v1_alt 111600 1 + 190869 t s gorGor5.CYUI01015914v1 72726 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127562 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33980307 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596650 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357911 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950643 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86721 1 - 21531802 T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111118 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266472 1 + 6586416 T i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 343304 1 - 2409723 C i saiBol1.JH378296 C 0 I 44 s otoGar3.GL873611 2212247 1 - 8137123 T i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 71904 45 + 376347 I e cebCap1.NW_016107703v1 477792 45 - 2125214 I e panTro5.chr7_NW_015973501v1_random 9756 485 - 19153 I a score=627241.000000 s hg38.chr7_KI270899v1_alt 111601 88 + 190869 ggtg-------------------------------------------ccctcaccctaagccagcag--cccacgaccacccagaggcc--aggaggcccccagagcccCCAGCACCCAC----GGCTCCCTCCAGTGG s gorGor5.CYUI01015914v1 72727 131 - 432965 GGTGGCCCCACGGGGGCCAGGAGGGCAGCTCGAAGGGCCATTGGGTGCCCTCACCCTAAGCCAGCAG--CCCACCACCACCCAGAGGCC--AGGAGGCCCCCAGAGCCCCCAGCACCCAC----GGCTCCCTCCAGTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127563 130 + 85365473 GGTGGCCCCAC-GGGGCCAGGAGGGTAGCTCGAAGGGCCATTGGGTGCCCTCACCCTAAGCCAGCAG--CCCACCACCACCCAGAGGCC--AGGAGGCCCCCAGACCCCCCAGCACCCAC----AGCTCCCTCCAGTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33980308 130 + 185818997 GGTGGTCCCACGGGGGCCAGGAGGGCAGCTTGAAGGGCCACTGGGTG-CCTCACCCTAAGCCAGCAG--CCCACCACCACCCAGAGGCC--AGGAGGCCCCCGGAGTCCCCAGCACCCAC----GGCTCTCTCCAGTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596651 130 + 192294377 GGTGGTCCCACGGGGGCCAGGAGGGCAGCTTGAAGGGCCACTGGGTG-CCTCACCCTAAGCCAGCAG--CCCACCACCACCCAGAGGCC--AGGAGGCCCCCGGAGTCCCCAGCACCCAC----GGCTCTCTCCAGTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4357912 130 - 9440265 GGTGGTCCCACGGGGACCAGGAGGGCAGCTTGAAGGGCCACTGGGTG-CCTCACCCTAAGCCAGCAG--CCCACCACCACCCAGAGGCC--AGGAGGCCCCCGGAGTCCCCAGCACCCAC----GGCTCTCTCCAGTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950644 130 - 21915920 GGTGGTCCCACGGGGGCCAGGAGGGCAGCTCGAAGGGCCACTGGGTG-CCTCACCCTAAGCCAGCAG--CCCACCACCACCCAGAGGCC--AGGAGGCCCCCGGAGTCCCCAGCACCCAC----GGCTCCCTCCAGTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86722 130 - 21531802 GGTGGTCCCACGGGGGCCAGGAGGGCAGCTCGAAGGGCCACTGGGTG-CCTCACCCTAAGCCAGCAG--CCCACCACCACCCAGAGGCC--AGGAGGCCCCCGGAGCCCCCAGCACCCAC----GGCTCCCTCCAGTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111119 130 - 2515279 GGTGGTCCCACGGGGGCCAGGAGGGCAGCTTGAAGGGCCACTGGGTG-CCTCACCCTAAGCCAGCAG--CCCACCACCACCCAGAGGCC--AGGAGGCCCCCGGAGTCCCCAGCATCCAC----GGCTCTCTCCAGTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266473 133 + 6586416 GGGGGTCCCACGGGGGCCAGGAGGGCAGCTCAAAGGGCCATTGGGTGCCCTCACCCTAAGCCAGCAGCTCCCACCACCACCCAGAGGCC--AGGAGGCCCCTGGAGCCCCCAGCACCCAT----GGCTCCCTCCAGTGG i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 343349 91 - 2409723 -------------------------------------------GGTGCCCTCACCCCATGCCAGAAG--CCCACCATCACCCAAAAGCC--AGGAGGCCCCCGGAGCCCCCCACCCCAAAGAT-GACTCCCTCCAGTGG i saiBol1.JH378296 I 44 C 0 s cebCap1.NW_016107703v1 477837 90 - 2125214 -------------------------------------------GGTGCCCTCACCCCATGCCAGAAG--CCCACCTTCACCCAAAAGCC--AGGA-GCCCCCAGAGCCCCCCGCCCCAATGAC-GACTTCCTCCAGTGG i cebCap1.NW_016107703v1 I 45 C 0 s aotNan1.NW_018514293v1 71949 92 + 376347 -------------------------------------------GGTGCCCTCACCCCATGCCAGAAG--CCCACCATCACCCAACAGCC--ACGAGGCCCCCGGAGCCCCCCACCCCAACGACTGACTCCCTCCAGTGG i aotNan1.NW_018514293v1 I 45 C 0 s otoGar3.GL873611 2212248 119 - 8137123 GGTGGTCCAGTGTGGGC--AGGGGTCAGCTCAGAGGGCTTTC-GATGCCCTCACTCCACACAAGTTG---CCACCACCTCCCAGTAGGCTGAGGAGACCCACCGAGCCTC--------------CCTTCCCCCAAGTGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e panTro5.chr7_NW_015973501v1_random 9756 485 - 19153 I a score=304029.000000 s hg38.chr7_KI270899v1_alt 111689 53 + 190869 GAAGAGTAGGATCAGCCCAGAGCCCCTGCTGAGCCTGGACAAGGGGAAGGAAG s gorGor5.CYUI01015914v1 72858 53 - 432965 GAAGAGTAGGATCAGCCCGGAGCCCCTGCTGAGCCTGGACAAGGGGAAGGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127693 53 + 85365473 GAAGAGTGGGATCAGCCTGGAGACCCTGCTCAGCCTGGACAAGGGGAGGGAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33980438 53 + 185818997 GAAGAGTGGGGTCAGCCCGGAGCCCCTGCCCAGCCTGGATGAAGGGAGGGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596781 53 + 192294377 GAAGAGTGGGGTCAGCCCGGAGCCCCTGCCCAGCCTGGATGAAGGGAGGGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4358042 53 - 9440265 GAAGAGTGGGGTCAGCCCGGAGCCCCTGCCCAGCCTGGATGAAGGGAGGGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950774 53 - 21915920 GAAGAGTGGGGTCAGCCCGGAGCCCCTGCCGAGCCTGGATGAAGGGAGGGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86852 53 - 21531802 GAAGGGTGGGGTCAGCCCGGAGCCCCTGCTGAGCCTGGACGAGGGGAGGGAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111249 53 - 2515279 GAAGAGTGGGGTCAGCCCGGAGCCCCTGCCCAGCCTGGATGAAGGGAGGGAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266606 53 + 6586416 GAAGAGTGGGGTCAGCCCGGAGCCCCTGCTGAGCCTGGACCAGGGGAGGGAAG i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 477927 52 - 2125214 GAAGAATGGGATCAGCC-GGAGCCCCTGCTGAGCCTGGACAAGAGAAGGGAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 72041 52 + 376347 GAAGAATGGGATCAGCC-AGAGCCCCTGCTGAGCCTGCACCAGGGGAGGGAAG i aotNan1.NW_018514293v1 C 0 I 69 s otoGar3.GL873611 2212367 46 - 8137123 -------GAGATCAGCCCGAGACCCCTGCCAGGTCTGGACAGAGGGAAGGGAG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C e panTro5.chr7_NW_015973501v1_random 9756 485 - 19153 I a score=50631.000000 s hg38.chr7_KI270899v1_alt 111742 14 + 190869 GGGAAGCTCAGC----------------GT s gorGor5.CYUI01015914v1 72911 14 - 432965 GGGAAGCTCAGC----------------GT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127746 30 + 85365473 GGGAAGCTCAGCATTTCCAGGGCGCTCAGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33980491 14 + 185818997 GGGAAGCTCCGC----------------GT i rheMac8.chr3 C 0 I 16 s macFas5.chr3 33596834 14 + 192294377 GGGAAGCTCCGC----------------GT i macFas5.chr3 C 0 I 16 s macNem1.NW_012019910v1 4358095 14 - 9440265 GGGAAGCTCCGC----------------GT i macNem1.NW_012019910v1 C 0 I 16 s cerAty1.NW_012002954v1 16950827 14 - 21915920 GGGAAGCTCCGC----------------GT i cerAty1.NW_012002954v1 C 0 I 16 s chlSab2.chr28 86905 14 - 21531802 GGGAAGCTCCGC----------------GT i chlSab2.chr28 C 0 I 31 s manLeu1.NW_012101810v1 111302 14 - 2515279 GGGAAGCTCCGC----------------GT i manLeu1.NW_012101810v1 C 0 I 16 s colAng1.NW_012117710v1 266659 14 + 6586416 GGGAAGCTCAGT----------------AT i colAng1.NW_012117710v1 C 0 I 16 s cebCap1.NW_016107703v1 477979 14 - 2125214 TGGACGCTTAGC----------------AT i cebCap1.NW_016107703v1 C 0 I 16 s otoGar3.GL873611 2212413 14 - 8137123 CAGAATCTCCAG----------------AT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 72093 69 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e panTro5.chr7_NW_015973501v1_random 9756 485 - 19153 I a score=49565.000000 s hg38.chr7_KI270899v1_alt 111756 15 + 190869 -GGTCACCCGGCAGTT s gorGor5.CYUI01015914v1 72925 15 - 432965 -GGTCACCCGGCAATT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127776 15 + 85365473 -AGTCACCAGGCAATT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33980521 15 + 185818997 -AGTCACTGGGCAATT i rheMac8.chr3 I 16 C 0 s macFas5.chr3 33596864 15 + 192294377 -AGTCACTGGGCAATT i macFas5.chr3 I 16 C 0 s macNem1.NW_012019910v1 4358125 15 - 9440265 -AGTCACTGGGCAATT i macNem1.NW_012019910v1 I 16 C 0 s cerAty1.NW_012002954v1 16950857 15 - 21915920 -AGTCACTGGGCAATT i cerAty1.NW_012002954v1 I 16 C 0 s manLeu1.NW_012101810v1 111332 15 - 2515279 -AGTCACTGGGCAATG i manLeu1.NW_012101810v1 I 16 C 0 s colAng1.NW_012117710v1 266689 15 + 6586416 -AGTCACCAGGCGATT i colAng1.NW_012117710v1 I 16 C 0 s cebCap1.NW_016107703v1 478009 15 - 2125214 -AGTCACAGGGCAATT i cebCap1.NW_016107703v1 I 16 C 0 s otoGar3.GL873611 2212427 15 - 8137123 GAGTCACCAGAGATT- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 86919 31 - 21531802 I e aotNan1.NW_018514293v1 72093 69 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e panTro5.chr7_NW_015973501v1_random 9756 485 - 19153 I a score=105155.000000 s hg38.chr7_KI270899v1_alt 111771 22 + 190869 TCTCCACTCTGAACCGC-GTGCT s gorGor5.CYUI01015914v1 72940 22 - 432965 TCTCCACTCTGAACCGC-GTGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127791 22 + 85365473 TCTCAACTCTGAACCAC-GTGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33980536 22 + 185818997 TCTCAACTCTGAACCGC-GTGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596879 22 + 192294377 TCTCAACTCTGAACTGC-GTGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4358140 22 - 9440265 TCTCAACTCTGAACCAC-GTGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950872 22 - 21915920 TCTCAACTCTGAACCGC-GTGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86950 22 - 21531802 TCTCAACTCGGAACTGC-GTGCT i chlSab2.chr28 I 31 C 0 s manLeu1.NW_012101810v1 111347 22 - 2515279 TCTCAACTCTGAACCAC-GTGCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266704 22 + 6586416 TCTCAACTCGGAACCAC-GTGCT i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 478024 23 - 2125214 TCTCAACTCTGAACCTCGGTGCT i cebCap1.NW_016107703v1 C 0 I 1 s otoGar3.GL873611 2212442 22 - 8137123 CCTCAACTCTGCATTGT-GGGTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 72093 69 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e panTro5.chr7_NW_015973501v1_random 9756 485 - 19153 I a score=320368.000000 s hg38.chr7_KI270899v1_alt 111793 62 + 190869 GGGGGTCACGGGGCTCCCG--CTGCTGAC-GAGGAAGCAGGG--CCCACCCTGTCCAGCCTCGGCCT s gorGor5.CYUI01015914v1 72962 62 - 432965 GGGGGTCATGGGGCTCCCG--CTCCTGAC-GAGGAAGCAGGG--CCCACCCTGTCCGGCCTCGGCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127813 65 + 85365473 -GGGGTCACGGGGCTCCCACTCTGCTGCC-GAGGAAGCAGGGTCCCCACCCCGTCTGGCCTCGGCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33980558 65 + 185818997 GGGGGTCACGGGGCTCCTG--CTGCTGACAAGGGAAGCAGGGCCCCCACCCCGTCTGGCCTCGGCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33596901 65 + 192294377 GGGGGTCACGGGGCTCCTG--CTGCTGACGAGGGAAGCAGGGCCCCCACCCCGTCTGGCCTCGGCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4358162 65 - 9440265 GGGGGTCACGGGGCTCCTG--CTGCTGACGAGGGAAGCAGGGCCCCCACCCCGTCTGGCCTCGGCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950894 65 - 21915920 GGGGGTCACGGGGCTCCTG--CTGCTGACGGGGGAAGCAGGGCCCCCACCCCGTCTGGCCTCAGCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 86972 64 - 21531802 GGGGGTCACGGGGCTCCTG--CTGCTGAC-GGGGAAGCAGGGCCCCCACCCCGTCCGGCCTCGGCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111369 65 - 2515279 GGGGGTCACGGGGCTCCTG--CTGCTGACGGGGGAAGCAGGGCCCCCACCCTGTCTGGCCTCGGCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266726 64 + 6586416 GGGGGTCACGGGGCTCCTG--CTGCTGAT-GGGGAAGCAGGGCCCCCACCCCGTCCGGCCTCGGCCT i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 478048 64 - 2125214 GGGGGTCATGGGGCTCCTG--TTGTGGAG-AAGGAAGCAGGGCTCCCACCCCGTCTGGCCTCGGCCT i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 72162 64 + 376347 GGGGGTCACAGGGCTCCTG--CTGCGGAG-AAGGAAGCAGGGATCCCACCCCGTCTGGCCTCGGCCT i aotNan1.NW_018514293v1 I 69 C 0 s otoGar3.GL873611 2212464 28 - 8137123 ---------------------------------------GGACCCCCACCTCGTCCCACGTCTGGCC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C e panTro5.chr7_NW_015973501v1_random 9756 485 - 19153 I a score=604316.000000 s hg38.chr7_KI270899v1_alt 111855 104 + 190869 CTGCAGACCTG-AGCGCAGCCCCACGTATCCCCACGATG-GTTGCCGTCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCGTCCTGTGACCACAG-AGATGG--CGTGAG- s panTro5.chr7_NW_015973501v1_random 10241 112 - 19153 CTGCAGACCTGTAGCGCAGCCCCATGTATCCC-ACGATGTGTTGCTGTCCCTGC-------GTGGGATCTTTTATTTTCTCCATCT-CAGCGTCCTGTGACCACAGGAGATGAGCCGTGAG- i panTro5.chr7_NW_015973501v1_random I 485 C 0 s gorGor5.CYUI01015914v1 73024 104 - 432965 CTGCAGACCTG-AGCGCAGCCCCACGTACCGCCACGATG-GTTGCCGTCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCGTCCTGTGACCACAG-TGATGG--CGTGAG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127878 104 + 85365473 CTGCGGACCTG-GGCACAGCCCCACGCAGCCCCGCGACG-GTTGCCGTCCCTGC-------GTGAG---TTTTATTTTCTCCA-CT-CAGCGTCCTGTGACCACAG-AGACCG--CGTGAG- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33980623 102 + 185818997 CTGCGGACCCG-GGCACAGCCCC--GCACCCCCACGGTG-GTTGCCGCCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCGTCCTGTGACCACAG-AGCTGG--CATGAG- i rheMac8.chr3 C 0 I 20 s macFas5.chr3 33596966 102 + 192294377 CTGCGGACCCG-GGCACAGCCCC--GCACCCCCACGGTG-GTTGCCGCCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCGTCCTGTGACCACAG-AGCTGG--CATGAG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4358227 102 - 9440265 CTGCGGACCCG-GGCACAGCCCC--GCACCCCCACGGTG-GTTGCCGCCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCGTCCTGTGACCACAG-AGCTGG--CATGAG- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16950959 102 - 21915920 CTGCGGACCCG-GGCACAGCCCC--GCACCCCCGCGGTG-GTTGCCGTCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCATCCTGTGACCACAG-AGCTGG--CATGAG- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87036 101 - 21531802 CTGCAGACCCG-GGCACAGCCCC--GCACCCCCGCGGTG-GTTGCCGTCCCTGC-------GTGGG----TTTATTTTATCCA-CT-CAGCGTCCTGTGACCACAG-AGCTGG--CATGAG- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111434 102 - 2515279 CTGCGGACCCG-GGCACAGCCCC--GCACCCCCGCAGTG-GTTGCCGTCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCGTCCTGTGACCACAG-AGCTGG--CATGAG- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266790 104 + 6586416 CTACAGACCCG-GGCACAGCCCCGTGCACCCCCGCGGTG-GTTGCCGTCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCGTCCTGTGACCACAG-AGCTGG--CATGAG- i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 478112 103 - 2125214 CTGAAGACCTG-GGCACAGCTCCACACACTCCTGCGAT--GTGGCCATCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCATCCTGTGATCACAG-AGATGG--CATGAG- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 72226 103 + 376347 CTGAAGACCTG-GGCACAGCCCCACACACTCCTGCGAT--GTGGCCATCCCTGC-------GTGGG---TTTTATTTTCTCCA-CT-CAGCATCCTGTGATCACAG-AGATGG--CATGAG- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2212492 101 - 8137123 CTGCAGACACA-GGCA---------GTGGCCCTGCAAAG-CTGGACTTCTCTGCTCCACGTGTGGG---TTTTATTTCTTTGA-CCACAGTG-CCTCTGACCTCAG-AGC--A--CTTGGGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=440593.000000 s hg38.chr7_KI270899v1_alt 111959 102 + 190869 GTAGGAAGCTGTACAGCCCCAGCACGGGGCCCACGAGAGGAA--GTCTCC-AGCA-GCAGCTAATC-CTGGGCGGAGATGACAGCCCGGAGCCTTGGGCTGTTTA--AA s panTro5.chr7_NW_015973501v1_random 10353 107 - 19153 GTATGGAGCT-TACAGCCTCAGCACAGGGCCCACGAGAGGCAATGTCTCCTAGCA-GCAGCTAATTGCTGGGCGGAGATGACAGCCCGGAGCCTTGGGCTGTCTATAAA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 73128 102 - 432965 GTAGGAAGCTGTACAGCCTCAGCACAGGGCCCACGAGAGGAC--GTCTCC-AGCA-GCAGTTAATC-CTGGGCGGAGATGACAGCCCGGAGCCTTGGGCTGTTTA--AA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 127982 103 + 85365473 GTAGGACGCTGTACAGCCTCAGCACGGAGCCCACGAGAGGAC--GTCTCC-AGCAGGCAGCTAATC-CTGGGCGGAGATGACAGCCCGGAGTCTTGGGCTGTTTA--AA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33597068 103 + 192294377 GCAGGGAGCGGTACGGCCTCAGCACGGAGTCCGTGGGAGGAA--GTCTCC-GGCTCGCAGCTAATC-CTGGGTGGAGATGATAGCCGGGAGTCTCAGGCTGTTTA--AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4358329 103 - 9440265 GCAGGGAGCGGTACGGCCTCAGCACGGAGTCCGCGGGAGGAA--GTCTCC-GGCTCGCAGCTAATC-CTGGGTGGAGATGATAGCCGGGAGTCTCAGGCTGTTTA--AA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951061 103 - 21915920 GCAGGGAGCGGTACAGCCTCAGCACGGAGTCCGCGGGAGGAA--GTCTCC-GGCTCGCAGCTAGTC-CTGGGTGGAGATGATAGCCGGGAGTCTTAGGCTGTTTA--AA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87137 102 - 21531802 GCAGGGAGCGGTATGGCCTCAGCACGGAGCCCACGGGAGGAA--GTCTCC-AGCTCGCAGCTAATC-CT-GGCGGAGATGATAGCCGGGAGTCTCCGGCTGTTTA--AC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111536 103 - 2515279 GCAGGGAGCGGTATGGCCTCAGCACGGAGTCTGCGGGAGGAA--GTCTCT-GGCTCGCAGCTAATC-CTGGGTGGAGATGATAGCCGGGAGTCTCAGGCTGTTTA--AA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266894 103 + 6586416 GCGGGGAGCGGTACGGCCTCAGCACGGAGCCCACGGGAGGAA--GTCTCC-AGCTCGCAGCTAGTC-CTGGGTGGAGATGATAGCCGGGAGTCTCAGGCTGTTTA--AA i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 478215 103 - 2125214 GTAGGATGCTGCACAGCCTCAGCACGGAGCCCACGAGAGGAA--GTCTGC-AGCAGGCAGCTCATC-CTGGGCTAAGATGACAGTCGGCAGTTGTGGGTTGTTTA--AA i cebCap1.NW_016107703v1 C 0 I 30 s aotNan1.NW_018514293v1 72329 103 + 376347 GTAGGAAGCTGCACAGCCTCAGCACGGAGCCCACGAGAGGAA--GTCTCC-AGCAGGCAGCTCATC-CTGGGCTAAGATGACAGTCGGCAGTCTTGGGCTGTTTA--AA i aotNan1.NW_018514293v1 C 0 I 47 s otoGar3.GL873611 2212593 63 - 8137123 GTAGGAAGCTGCA-------------------GTGAGACAGA--AGTTCT-----------TAATG-CAGACGCGAGAT----GCCTGGGGTGGGGGGGA--------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e rheMac8.chr3 33980725 20 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C a score=62589.000000 s hg38.chr7_KI270899v1_alt 112061 20 + 190869 C-TC------------------------------CAGCTGC-ACGGAAAGCC s panTro5.chr7_NW_015973501v1_random 10460 24 - 19153 CATCGT----------------------------CAGCTGCCAGGAAAAGCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 73230 20 - 432965 C-TC------------------------------CAGCTGC-ACAGAAAGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 128085 50 + 85365473 G-CCTTCACAGTCGCTTCCTTGTGCCCTGTGCTGCAGCTGC-ATGGAAGGCC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33597171 50 + 192294377 G-TCTTCATAGTGGCTTCCTGGTGCCCCCTGCTCCAGCTGC-ATGGAAGGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4358432 50 - 9440265 G-TCTTCATAGTGGCTTCCTGGTGCCCCGTGCTCCAGCTGC-ATGGAAGGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951164 50 - 21915920 G-TCTTCATAGTGGCTTCCTGGCGCCCCGTGCTCCAGCTGC-ATGGAAGGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87239 50 - 21531802 G-TCTTCATGGTGGCTTCCTGGCGCCCCGTGCTCCAGCTGC-ATGGAAGGCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111639 50 - 2515279 G-TCTTCATAGTGGCTTCCTGGCGCCCCGTGCTCCAGCTGC-ATGGAAGGCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 266997 50 + 6586416 G-TCTTCATAGTGGCTTCCTGGCGCCCTGTGCTCCAGCTGC-ATGGAAGGCT i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 478348 18 - 2125214 -------------------------------CTCCAGCTGC-ACAGAAGA-- i cebCap1.NW_016107703v1 I 30 C 0 s otoGar3.GL873611 2212656 20 - 8137123 ----------------TCTTGGCTA-------------TGC-ATGTGGCG-- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e rheMac8.chr3 33980725 20 + 185818997 I e aotNan1.NW_018514293v1 72432 47 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C a score=485325.000000 s hg38.chr7_KI270899v1_alt 112081 97 + 190869 --TCCAGC-TGAG-AGAGTTTCCCAGAGTC--TGTCCCCGGGGTCGAG-CCTTCGGGG-------GCCAGGCC-ATGGGA-GCTGG-GTCTTC-CTGTGCCTGG-AGCCTT--GTCCC s panTro5.chr7_NW_015973501v1_random 10484 103 - 19153 --TCCAGCCTGAGGAGAGTTTCCCAGAGTC--TGTCCGCGGCGTCGAGGCCCTTAGGC-------GGCAGGCC-ATGGGAAGCTGGCGTCTTC-CTGTGCCTGGGAGCCTT--GTCCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 73250 97 - 432965 --TCCAGC-TGAG-AGAGTTTCCCAGAGTC--TGTCCCCGGGGTCGAG-CCTTCGGGG-------GCCAGGCC-ATGGGA-GCTGG-GTCTTC-CTGTTCCTGG-AGCCTT--GTCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 128135 95 + 85365473 --TCCAGC-TG---AGAGTTTCCCGGAGTC--TGTCCCCAGGGTGGAG-CCTTCAGGG-------GCCAGGCC-ATGGGA-GCTGG-GTCTTC-CTGTGCCTGG-AGCCTT--GTCCC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33597221 97 + 192294377 --TCCAGC-TGAG-AGAGCTTCCCGGAGTC--TGTCCCCGGGGCCGAG-CCTTCAGGG-------GCCAGGCC-GTGGGA-GCTGG-GTCTTC-CTGTGCCCAG-AGCCTC--GTCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4358482 97 - 9440265 --TCCAGC-TGAG-AGAGCTTCCCGGAGTC--TGTCCCCGGGGCCGAG-CCTTCAGGG-------GCCAGGCC-GTGGGA-GCTGG-GTCTTC-CTGTGCCCAG-AGCCTC--GTCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951214 97 - 21915920 --TCCAGC-TGAG-AGAGCTTCCCGGAGTC--TGTCGCTGGGGCCGAG-CCTTCAGGG-------GCCAGGCC-GTGGGA-GCTGG-GTCTTC-CTGTGCCCAG-AGCCTC--GTCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87289 97 - 21531802 --TCCAGC-TGAG-AGAGCTTCCCGGAGTC--TGTCCCCAGGGCCGAG-CCTTCAGGG-------GCCAGGCC-GTGGGA-GCTGG-GTCTTC-CTGTGCCCAG-AGCCTT--GTCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111689 97 - 2515279 --TCCAGC-TGAG-AGAGCTTCCCGGAGTC--TGTCCCCGGGGCCGAG-CCTTCAGGG-------GCCAGGCC-GTGGGA-GCTGG-GTCTTC-CTGTGCCCAG-AGCCTC--ATCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267047 97 + 6586416 --TCCAGC-TGAG-AGAGCTTCCCGGAGTC--TGTCCCCGGGGCCGAG-CCTTCAGGG-------GCCAGGCC-GTGGGA-GCTGG-GTCTTC-CTGTGCCCAG-AGCCTC--GTCCC i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 478366 98 - 2125214 --TTCGGC-TGAG-GGGGGTTCCTGGCATC--TGTTCCCGGGGTTGAG-CCTTCAGGG-------GCCAGGCCAGTGGAA-GCTGG-GTCTTC-CTGTGCCAGA-AGCCTT--GTCGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 72479 98 + 376347 --TTCAGC-TGAG-GGGGTTTCCTGGCGTC--TGTTCCCGGGGTTGAG-CCTTCAGGG-------GCCCGGCCAGTGGGA-GCTGG-GTCTTC-CTGTGCCGGA-AGCCTT--GTCAC i aotNan1.NW_018514293v1 I 47 C 0 s otoGar3.GL873611 2212676 106 - 8137123 TGTCC--C-TGGG-AGAATGTCCCAGCATCTGTGTCCACATGGTCCAG--CACCAGGGTGAAGCTGCCA--CC-ATTACA-GGCTG-ATCTTCACTTTGCCCCT-GTCCTTTGGTCAC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e rheMac8.chr3 33980725 20 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C a score=3260775.000000 s hg38.chr7_KI270899v1_alt 112178 545 + 190869 CTGCGGACCTGC-AGTGTGGCCAG-A--TGA----TGAGTCTTGCA-CTGAGCAGAACTCCTTGGGCCTTAGG-GGGTTCTGCCACCACCCA---GCCA-TCATTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACACCCA-GGTCTCGCTGCC-TGGACCCTCTGGGGGAGCAA-GCTTTgagcaggagaggggccaggagcccctgagg-agcaggagc-gagggctcagagccaCAGAGA-------A-TTCCTCAGCCAG-GCCTG-TGACAAACACAGCTGCC--A---------CTCCTCTTCCAGCCCCA-------------------------------------CTGCCCCA-GC-CACATC-----------ACA-TTGGTCC-TGGTCACTCGCAGGGAAGGGCACTCACTGTCCA-GGGAGAAAACCCATTCCTTTCCTCTGG-TTCTCTTCCC--CAAAGACA-TGCAAATACTTTTTCCA-GGAATTT----TCTAACAGC-AATGATGCACGGACCCTTAACTTTAAACTGACCTAGAG-GCCCAGGAGAGCCCAATTATTTCTGGCAC--AGGCACCTGGGCACAGGGTCTGGCCTGGTTCACTCTGGAGTGCCTGAGTCATGGTGGAAATTCAATATTT s panTro5.chr7_NW_015973501v1_random 10587 567 - 19153 CTGCG-ACCTGC-AGTGTGGCCAGCA--TGA----T-AGTCTTGCAACTGAGCAGAACTCCTTGGGCCTTAGGCGGGCTTTGC-ACCACCCAA--GCCAGTCATTG-------------------------GCCAGGCATGGGGAAGGCCG-CCCACACCCACGGTCTCGCTGCCGTGGACCCTCTCGGGGAGCAA-GCTTTGAGCGGGAAGAGGGCCAGGAGGCCCTGAGGGAGCAGGAGC-G-GGGCTCAGAGCCTCAGAGA-------AATTCCTCAGCCAGCGCCTGGTGACAAAC-CAGCTGCCTAA---------CTCCTCTTCCAGCCCCA-------------------------------------CTGCCCCAAGCGCACATC-----------ACAATTGGTCCCTGGTCACTCGCGGGAAGGGGCACTCACTGTCCAAGGGAGAAAACCCATTCCTTTCCTCTGGGTTCTCTTCGCGCCAAAGACACTGCAAATACTTTTCTCACGGAATTT----TCTAACAACCAATGATGCATCGGACCTTAACTTTAAACTGACCTAGAGCAGCCAGGAGAGCC-AATTATTTCTGGCACGCAGGCACCTGGGCACAGGGTCTGGCCTGGTTCACTCTGGAGTGCCTGAGTCATGGTGGAAATTCAATATTT i panTro5.chr7_NW_015973501v1_random C 0 I 1 s gorGor5.CYUI01015914v1 73347 546 - 432965 CTGCAGACCTGC-AGTGTGGCCAG-A--TGA----TGAGTCTTGCA-CTGAGCAGAACTCCTTGGGCCTTACG-GGGCTCTGCCACCACCCA---GCCA-TCATTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACACCCA-GGTCCCGCTGCC-TGGACCCTCTGGGGGAGCAA-GCTTTGAGCAGGAGAGGGGCCAGGAGCCCCTGAGG-AGCAGGAGC-GAGGGCTCAGAGCCACAGAGA-------A-TTCCTCAGCCAG-GCCCTGTGACAAACACAGCTGCC--A---------CTCCTCTTCCAGCCCCA-------------------------------------CTGCCCCG-GC-CACATC-----------ACA-TTGGTCC-TGGCCACTCGCAGGGAAGGGCACTCACTGTCCA-GGGAGAAAACCCATTCCTTTCCTCTGA-TTCTCTTCCC--CAAAGGCA-TGCAAATACTTTTTCCA-GGAATTT----TCTTACAGC-AATGATGCTCAGACCCTTAACTTTAAACTGACCTAGAG-GCCCAGGAGAGCCCAATTATTTCTGGCAC--AGGCACCTGGGCACCGGGTCTGGCCTGGTTCACTCTGGAGTGCCTGAGTCATGGTGGAAATTCAATATTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 128230 541 + 85365473 CTGCGGACCTGC-CGCGTGGCCAG-A--TGA----TGAGTCTTGCA-CTGAGCAGAAGTCCTTGGGCCTTAGG-GGGCTCTACCACCGCCCA---CCCA-TCATTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACACCCA-GGTCCCGCTGCC-TGGACCCTCT-GGGGAGCGA-GCTTCGAGCAGGAGAGGGGCCAGGAATGCGTGAGG-AGCAGGCCC-GAGGGCTCAGAGCCACAGAGA-------A-TTCCTCAGCCAG-GCCTG-TGACAAACACAGCTGCC--A---------CTCTTCTTCCAGCCCCA-------------------------------------CTGCTTCA-GC-CACGTT-----------ACA-CTGGCCC-TGGCCACTTGCAGGGAAGGACGCTCACCGTCCA-GGGAGAAAACCCATTCCTTTCCTCTGG-TTCTCTTCCC--CAAAGACA-CGCAAATTCTTTTTCCA-GGCATTT----TCTAACAAC-AATGATGCACAGACCCTTAACTTTAAACTGACCTAGAG-GCCTAGGAGAGCC--GTTATTTCTGGCAC--AGGCACCTGGGCACAGGGTCTGGCCTGGTTCACTCTAGAGTGCCCGA-TCATGGTGGAAATTCAATGTTT i nomLeu3.chr20 C 0 M 587 s rheMac8.chr3 33980745 544 + 185818997 CTGCGGACCTGC-GAGGTGGCCAG-A--TGA----TGAGCCTGGCA-CTGAGCAGAATTCCTCGGGCCTTAGG-GGGCTCTGCCACCACCCA---CCCA-TTGTTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACACCCA-GGTCCCGCTGCC-TGCACCCTCTGGGGAAACCA-GCTTTGAACAGGAGAGGGGCCAGGAGCCCCCAAGA-GGCAGGCCC-GAGGGCTCGGAGCCAC-GAGA-------G-TGCCTCAGCCAG-GCCTG-CGACAAACACAGCTGCC------------CTCCTCTTTCAGCCCCG-------------------------------------CTGCCCCA-GC-CGCAGA-----------ACG-TTGGCCC-CGGCCACTCACAGGGGAGGGCACTCGCTGTCCA-GGGAGAAAACCCATTCCTTTCCTCTGG-TTCTGTTCCC--CAAAGACA-TGCAAATACTTTTTCCA-GGAATTTT---TCTAACAGC-AAAGATGCACAGACCCTTGACTTTAAACTGACCTAGAG-GCCCAGGAGAACCTACTTATTTCTGGCAC--AGGCACCTGGGCGCGGGGTCTGGCCTGGTTCACTCTGGAGTGCCTGAGTCATGGTGGAAATTCAATATTT i rheMac8.chr3 I 20 C 0 s macFas5.chr3 33597318 544 + 192294377 CTGCGGACCTGC-GAGGTGGCCAG-A--TGA----TGAGCCTGGCA-CTGAGCAGAATTCCTCGGGCCTTAGG-GGGCTCTGCCACCACCCA---CCCA-TTGTTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACACCCA-GGTCCCGCTGCC-TGCACCCTCTGGGGAAACCA-GCTTTGAACAGGAGAGGGGCCAGGAGCCCCCAAGA-GGCAGGCCC-GAGGGCTCGGAGCCAC-GAGA-------G-TGCCTCAGCCAG-GCCTG-CGACAAACACAGCTGCC------------CTCCTCTTTCAGCCCCG-------------------------------------CTGCCCCA-GC-CGCAGA-----------ACG-TTGGCCC-CGGCCACTCGCAGGGGAGGGCACTCGCTGTCCA-GGGAGAAAACCCATTCCTTTCCTCTGG-TTCTGTTCCC--CAAAGACA-TGCAAATACTTTTTCCA-GGAATTTT---TCTAACAGC-AAAGATGCACAGACCCTTGACTTTAAACTGACCTAGAG-GCCCAGGAGAACCTAGTTATTTCTGGCAC--AGGCACCTGGGCGCGGGGTCTGGCCTGGTTCACTCTGGAGTGCCTGAGTCATGGTGGAAATTCAATATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4358579 544 - 9440265 CTGCGGACCTGC-GAGGTGGCCAG-A--TGA----TGAGCCTGGCA-CTGAGCAGAATTCCTCGGGCCTTAGG-GGGCTCTGCCACCACCCA---CCCA-TTGTTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACACCCA-GGTCCCGCTGCC-TGCACCCTCTGGGGAAACCA-GCTTTGAACAGGAGAGGGGCCAGGAGCCCCCAAGA-GGCAGGCCC-GAGGGCTCGGAGCCAC-GAGA-------G-TGCCTCAGCCAG-GCCTG-CAACAAACACAGCTGCC------------CTCCTCTTTCAGCCCCG-------------------------------------CTGCCCCA-GC-CACAGA-----------ACG-TTGGCCC-CGGCCACTCGCAGGGGAGGGCACTCGCTGTCCA-GGGAGAAAACCCATTCCTTTCCTCTGG-TTCTGTTCCC--CAAAGACA-TGCAAATACTTTTTCCA-GGAATTTT---TCTAACAGC-AAAGATGCACAGACCCTTGACTTTAAACTGACCTAGAG-GCCCAGGAGAACCTAGTTATTTCTGGCAC--AGGCACCTGGGCACGGGGTCTGGCCTGGTTCACTCTGGAGTGCCTGAGTCATGGTGGAAATTCAATATTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951311 545 - 21915920 CTGCGGACCTGC-GAGGTGGCCAC-A--TGA----TGAGCCTGGCA-CTGAGCAGAATTCCTCGGGCCTTAGG-GGGCTCTGCCACCACCCA---CCCA-TTGTTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACACCCA-GGTCCAGCTGCC-TGCACCCTCTGGGGGAACCA-GCTTTGAACAGGAGAGGGGCCAGGAGCCCCCGAGA-GGCAGGCCC-GAGGGCTTGGAGCCATGGAGA-------G-TTCCTCAGCCAG-GCCTG-TGACAAACACAGCTGCC------------CTCCTCTTTCAGCCCCG-------------------------------------CTGCCCCA-GC-CGCAGA-----------ACG-TTGGCCC-CGGCCACTCGCAGGGGAGGGCACTCGCTGTCCA-GGGAGAAAACCCATTCCTTTCCTCTGG-TTCTGTTCCC--CAAAGACA-TGCAAATACTTTTTCCA-GGAATTTC---TCTAACAGC-AAAGATGCACAGACCCTTGACTTTAAACTGACCTAGAG-GCCCAGGAGAACCTAGTTATTTCTGGCAC--AGGCACCTGGGTGCGGGGTCTGGCCTGGTTCACTCTGGAGTGCCTGAGTCATGGTGGAAATTCAATATTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87386 545 - 21531802 CTGCGGACCTGC-GAGGTGGCCAG-A--TGA----TAAGCCTTGCA-ATGAGCAGAACTCCTCGGGCCTTACG-GGGCTCTGCCACCACCCA---CCCA-TCGTTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACACCCA-GGTCCTGCTGCC-TGGACCCTCTGGGGGAACCA-GCTTTGAACAGGAGAGGGGCCAGGAGCCCCTGAGA-GGCAGGCCC-GAGGGCTCAGAGCCACAGAGA-------G-TTCCTCAGCCAG-GCCTG-CGACAAACACAGCTGCC------------CTCCTCTTTCAGCCCCG-------------------------------------CTGCCCCA-GC-CGCAGA-----------ACG-TTGGCTC-TGGCCACTCGCAGGGAAGGGCACTCGCTGTCCA-GGGAGAAAACCCATTCCTTTCCTCTGG-TTCTGTTCCC--CAAAGACA-TGCAAATACTTTTTCCA-GGAATTTC---TCTAACAGC-AAAGATGCACAGACCCTTGACTTTAAACTGACTTAGAG-GCCCAGGAGAACCCAGTTATTTCTGGCAC--AGGCACCTGGGCACGGGGTCTGGCCTGGTTCACTCTGGAGTGTCTGAGTCATGGTGGAAATTCAATATTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 111786 544 - 2515279 CTGCGGACCTGC-GAGGTGGCCAG-A--TGA----TGAGCCTGGCA-CTGAGCAGAATTCCTCGGGCCTTAGG-GGGCTCTGCCACCACCCA---CCCA-TTGTTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACACCCA-GGTCCCGCTGCC-TGCACCCTCTGGGGAAACCA-GCTTTGAACAGGAGAGGGGCCAGGAGCCCCCAAGA-GGCAGGCCC-GAGGGCTCGGAGCCAC-GAGA-------G-TTCCTCAGCCAG-GCCTG-CGACAAACACAGCTGCC------------CTCCTCTTTCAGCCCCG-------------------------------------CTGCCCCA-GC-CGCAGA-----------ACG-TTGGCCC-CGGCCACTCGCAGGGGAGGGCACTCGCTGTCCA-GAGAGAAAACCCATTCCTTTCCTCTGG-TTCTGTTCCC--CAAAGACA-TGCAAATACTTTTTCCA-GGAATTTC---TCTAACAGC-AAAGATGCACAGACCCTTGACTTTAAACTGACCTAGAG-GCCCAGGAAAACCTAGTTATTTCTGGCAC--AGGCACCTGGGCGCGGGGTCTGGCCTGGTTCACTCTGGAGTGCCTGAGTCATGGTGGAAATTCAATATTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267144 548 + 6586416 CTGCAGACCTGC-GAGGTGGCCAG-A--TGA----TGAGCCTTGCA-CTGAGCAGAGCTCCTCGGGCCTTAGG-GGGCTCTGCCACCGCCCA---CCCA-TCGTTG-------------------------GCAGGGCA--GGGAAGGCCGGCCCACATCCA-GGTCCCGCTGCC-TGGACCCTCTAGGGGAACCA-GCTTTGAACAGCAGAGGGGCCAGGAGCCCCTGAGA-GGCAGGCCC-GAGGGCTCGGAGCCACGGAGA-------G-TTCCTCAGCCAG-GCCTG-CGACACACACAGCTGCC------------CTCCTGTTTCAGTCCCG-------------------------------------CTGCCCCA-GC-CGCAGA-----------ACA-TTGGCCC-TGGCCCCTCGCAGGGAAGGGCACTCGCTGTCCA-GGGAGAAAACCCATTCCTTTCCTCTGG-TTCTGTTCCC--CAAAGACA-TGCAAATACTTTTTCCA-GGAATTTCTCATCTAACAGC-AAAGATGCACAGACCCTTGACTTTAAACTGACCTAGAG-GCCCAGGAGAACCCAGTTATTTCTGGCAC--AGGCACCTGGGCGCGGGGTCTGGCCTGGTTCACTCTGGAGTGCCTGAGTCACGGTGGAAATTCAATATTT i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 478464 539 - 2125214 CTGCAGACCTGT-GGTGTGGCCAA-A--TG--------ATCTTGCA-CTGAGCAGAACTCCTTGGGCTGTAGG-GGACTCTGCCACCAGCCA---CCCA-TCATTG-------------------------GCAGGGCG--GGGAAGACCAGCTCACACTCA-GGTTCTGCTGG--GAGACCCTCTAAGGGAGTGA-GTTATGAGCAGGAGAGGGGCCAGGAGCCCCTGAGA-AGCAGGCCCTGAGGGCTCAAAGCCACAGAGC-------A-TTCTTCAGCCAG-GCCTA-AAGCAAACACAGATGCC--A---------CTCCTATTCCAGCCCCG-------------------------------------CTGCCCCA-GC-CAGGGG-----------ACC-TTGGCCC-TGGCGACTCACAGGTCAGGGCACTCACTG-CCA-CGGAGAAAACCCATTCCTTTCCTCTGA-TTCTCTTCCC--CAAAGACA-TGCACATAC-TTTTCCA-CGAATTT----TCTAGCAGC-AATGATGCACAGACTCTTAACTTTAAACTAACCTAGAG-GCTCAGGACAGCCTGATTACTTCTGGCAC--AGGCACCTGGGCACAGTGTCTGGCCTGGCTCACTCTAGAGTGCCTGAGTCATGGTGCAAATTCACTATTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 72577 542 + 376347 CTGCGGACCTGC-GATGTGGCCAA-G--TGA----TGAATCTTGCA-CTGAGCAGAACTCCTTGGGCTGTAGG-GGGCTCTGCCACCAGCCA---CCCA-TCATTG-------------------------GCAGGGCG--GGGAAGGCCAGCTCACACCCA-GGTTCTGCTGT--GAGACCCTCCAGGGGAGTGA-GTTACGAGCAGGAGAGAGGCCAGGAGCCCCTGAGA-AGCAGGCCCTGAGGGCTCAAAGCCACAGGGC-------A-TTCTTCAGCCAG-GCCTG-CAGCAAACACAGATGCC--A---------CTCCTATTCCAGCCACG-------------------------------------CTGCCCCA-GC-CAGGGG-----------ACG-TTGGCCC-TGGCGACTCACAGGTCAAGGCACTGGCTG-CCA-CGGAGAAAACCCATTCCTTTCCTCTGG-TTCTCTTCCC--CAAAGACA-TGCACATAC--TTTCCA-GGAATTT----TCTAGCAGC-AATGATGCACAGACCCTTAACTTTAAACTAACCTAGAG-GCTCAGGACAGCCTGATTACTTCTGGCAC--GGACACCTGGGCACAGTGTCTGGCCTGGTTCACTCTAGAGTGCCTGAGTCATGGTGGAAAGTCACTATTT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2212782 595 - 8137123 CTG-GGGCCTGTGGACATACCCAG-AATTGAGTCTTGAGTCTTGAG-TTAAACAAACCTCAGCGAGGCGTTGT-GGCTGGTGC--ACACCTAGGTCCCA-TTGTTGCCTGGTCCCTCCCAACTGACCCTGTGCTGGGAG--AGGGAGTGCGGTGCA-------GA----GCTGCC-TGGGACCAGCACAGCTGCAGCGCTGTGAGCAGGAGA-AGGCTGGG---CACGGAGA-A---------GGGGGCTGAGAGCCACACGGCTGTTACTA-TGACCTGGCCAG-GCCT--CCACAGAGATAGACACC--AGCACACCTGCTCCCCCTCCAGCCTCGGCCCACACAGGGGCCTCTGGCAGGGCCTGTCGTCTCTGTGCCTCT-CT-AGCAGGGCTGCTTGTCCACA-TGGGGCT-CTGCCACTC-CAGAGAGAGGCGCTCGCTGTCCC-ATGAGGAAGCCCATT-GTTTCCCCAAG-T--TATTTCT--CAAGGAGG-TAAAAACATTTTTTCCA-GGAATTT----TCTAGCAGC-AACAATGTACCCACCTTTAAGTGCAAACTAAATTCAAG-ACTTAGGGGGGCCTGATTATTACTGGCAC--A--------------------GGCCTGGTTCACTCCAGTGTGTCTGAATCATGGTGGAAATTCAATATTT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=47804.000000 s hg38.chr7_KI270899v1_alt 112723 8 + 190869 GTTAAGGA s panTro5.chr7_NW_015973501v1_random 11155 8 - 19153 GTTAGTTA i panTro5.chr7_NW_015973501v1_random I 1 C 0 s gorGor5.CYUI01015914v1 73893 8 - 432965 GTTAAGGA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33981289 8 + 185818997 GTTAAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33597862 8 + 192294377 GTTAAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4359123 8 - 9440265 GTTAAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951856 8 - 21915920 ATTAAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87931 8 - 21531802 GTTAAGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112330 8 - 2515279 GTTAAGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267692 8 + 6586416 GTTAAGGA i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 479003 8 - 2125214 GTTAAGGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 73119 8 + 376347 GTTAAAGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2213377 8 - 8137123 GTTAAGGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 128771 587 + 85365473 M a score=177393.000000 s hg38.chr7_KI270899v1_alt 112731 28 + 190869 AATTGGCAAAA--GGATGAAT-GAAGAAAGA s panTro5.chr7_NW_015973501v1_random 11163 28 - 19153 AATTGGCAAA---GGATGAATTGAAGAAAGA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 73901 28 - 432965 AATTGGCAAAA--GGATGAAT-GAAGAAACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129358 30 + 85365473 AATTGGCAAAAAGGAATGAAT-GAAGAAAGA i nomLeu3.chr20 M 587 C 0 s rheMac8.chr3 33981297 26 + 185818997 AATTGGCAAAA--GGATGAAC-GAAGAA--A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33597870 26 + 192294377 AATTGGCAAAA--GGATGAAC-GAAGAA--A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4359131 26 - 9440265 AATTGGCAAAA--GGATGAAC-GAAGAA--A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951864 28 - 21915920 AATTGGCAAAA--GGATGAAC-AAAGAAAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87939 28 - 21531802 AATTGGCAAAA--GGATGAAT-GAAGAAAGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112338 28 - 2515279 AATTGGCAAAA--GGATGAAC-AAAGAAAGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267700 28 + 6586416 AATTGGCAAAA--GGATGAAT-GAAGAAAGA i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 479011 28 - 2125214 AATTGACTAAA--GGATGAAT-GAAGAAAGA i cebCap1.NW_016107703v1 C 0 I 63 s aotNan1.NW_018514293v1 73127 28 + 376347 AATTGACAAAA--GGATGAAT-GAAGAAAGA i aotNan1.NW_018514293v1 C 0 I 63 s otoGar3.GL873611 2213385 28 - 8137123 AATTGGCAAAA--AGATGAAT-GAAAAAAGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=47191.000000 s hg38.chr7_KI270899v1_alt 112759 10 + 190869 GAACATTGCA s panTro5.chr7_NW_015973501v1_random 11191 10 - 19153 GAACATTGCA i panTro5.chr7_NW_015973501v1_random C 0 I 1 s gorGor5.CYUI01015914v1 73929 10 - 432965 GAACATCGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129388 10 + 85365473 GAACATTGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981323 10 + 185818997 GAACATTACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33597896 10 + 192294377 GAACATTACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4359157 10 - 9440265 GAACATTACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951892 10 - 21915920 GAACATTACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87967 10 - 21531802 GACCATTAGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112366 10 - 2515279 GAACATTACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267728 10 + 6586416 GAACATTACA i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2213413 10 - 8137123 GAACCTGGCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I a score=2552.000000 s hg38.chr7_KI270899v1_alt 112769 1 + 190869 C s panTro5.chr7_NW_015973501v1_random 11202 1 - 19153 C i panTro5.chr7_NW_015973501v1_random I 1 C 0 s gorGor5.CYUI01015914v1 73939 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129398 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981333 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33597906 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4359167 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s colAng1.NW_012117710v1 267738 1 + 6586416 C i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2213423 1 - 8137123 C i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 87977 0 - 21531802 C e manLeu1.NW_012101810v1 112376 0 - 2515279 C e cerAty1.NW_012002954v1 16951902 0 - 21915920 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I a score=8555.000000 s hg38.chr7_KI270899v1_alt 112770 6 + 190869 GGTGTG s panTro5.chr7_NW_015973501v1_random 11203 6 - 19153 GGTGTG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s nomLeu3.chr20 129399 6 + 85365473 GGTGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981334 6 + 185818997 GCTGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33597907 6 + 192294377 GGTGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4359168 6 - 9440265 GGTGTT i macNem1.NW_012019910v1 C 0 C 0 s colAng1.NW_012117710v1 267739 6 + 6586416 GGTGTT i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2213424 6 - 8137123 AGCATG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 87977 0 - 21531802 C e manLeu1.NW_012101810v1 112376 0 - 2515279 C e cerAty1.NW_012002954v1 16951902 0 - 21915920 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e gorGor5.CYUI01015914v1 73940 0 - 432965 C a score=28323.000000 s hg38.chr7_KI270899v1_alt 112776 30 + 190869 TTCA-AAATGTCCGCAGCT-----AT-ATTCCGCTGT s panTro5.chr7_NW_015973501v1_random 11209 36 - 19153 TTCATAAATGTCCGCAGCTTAATTAT-CTCGCGCTGT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s nomLeu3.chr20 129405 32 + 85365473 TTCAAAAACGTCCGCAGCG-----ACAATTCCGCTGT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33597913 30 + 192294377 TTCA-AAACGTCCACAGCT-----AC-ATTCCACTGT i macFas5.chr3 C 0 T 42 s macNem1.NW_012019910v1 4359174 30 - 9440265 TTCA-AAACGTCCACAGCT-----AC-ATTCCACTGT i macNem1.NW_012019910v1 C 0 C 0 s colAng1.NW_012117710v1 267745 30 + 6586416 TTCA-GAATGTCCACAGCT-----AC-GTTCCGCTGT i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2213430 30 - 8137123 TCCA-TCCAGTTCTCACCT-----AC-ATCCCACCGT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 87977 0 - 21531802 C e manLeu1.NW_012101810v1 112376 0 - 2515279 C e cerAty1.NW_012002954v1 16951902 0 - 21915920 C e rheMac8.chr3 33981340 0 + 185818997 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e gorGor5.CYUI01015914v1 73940 0 - 432965 C a score=10916.000000 s hg38.chr7_KI270899v1_alt 112806 11 + 190869 GAATTCAGGAG s panTro5.chr7_NW_015973501v1_random 11245 10 - 19153 -AATCCAGGAG i panTro5.chr7_NW_015973501v1_random C 0 I 1 s nomLeu3.chr20 129437 11 + 85365473 GAATTCAGGAG i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4359204 11 - 9440265 AAATGCAGGAG i macNem1.NW_012019910v1 C 0 C 0 s colAng1.NW_012117710v1 267775 11 + 6586416 AAATGCAGGAG i colAng1.NW_012117710v1 C 0 I 1 s otoGar3.GL873611 2213460 11 - 8137123 GAATTCAAGAA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 87977 0 - 21531802 C e manLeu1.NW_012101810v1 112376 0 - 2515279 C e cerAty1.NW_012002954v1 16951902 0 - 21915920 C e macFas5.chr3 33597943 42 + 192294377 T e rheMac8.chr3 33981340 0 + 185818997 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e gorGor5.CYUI01015914v1 73940 0 - 432965 C a score=1428.000000 s hg38.chr7_KI270899v1_alt 112817 4 + 190869 CTTG s panTro5.chr7_NW_015973501v1_random 11256 4 - 19153 CTTG i panTro5.chr7_NW_015973501v1_random I 1 C 0 s nomLeu3.chr20 129448 4 + 85365473 CTTG i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4359215 4 - 9440265 TTTG i macNem1.NW_012019910v1 C 0 C 0 s otoGar3.GL873611 2213471 4 - 8137123 CACA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 267786 1 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 87977 0 - 21531802 C e manLeu1.NW_012101810v1 112376 0 - 2515279 C e cerAty1.NW_012002954v1 16951902 0 - 21915920 C e macFas5.chr3 33597943 42 + 192294377 T e rheMac8.chr3 33981340 0 + 185818997 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e gorGor5.CYUI01015914v1 73940 0 - 432965 C a score=4660.000000 s hg38.chr7_KI270899v1_alt 112821 4 + 190869 TTCC s panTro5.chr7_NW_015973501v1_random 11260 4 - 19153 TTCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s nomLeu3.chr20 129452 4 + 85365473 TTCC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33597901 4 + 192294377 TTAC i macFas5.chr3 T 42 C 0 s macNem1.NW_012019910v1 4359219 4 - 9440265 TTCC i macNem1.NW_012019910v1 C 0 I 4567 s otoGar3.GL873611 2213475 4 - 8137123 TTCC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 267786 1 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 87977 0 - 21531802 C e manLeu1.NW_012101810v1 112376 0 - 2515279 C e cerAty1.NW_012002954v1 16951902 0 - 21915920 C e rheMac8.chr3 33981340 0 + 185818997 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e gorGor5.CYUI01015914v1 73940 0 - 432965 C a score=1910.000000 s hg38.chr7_KI270899v1_alt 112825 2 + 190869 AC s panTro5.chr7_NW_015973501v1_random 11264 2 - 19153 AC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s nomLeu3.chr20 129456 2 + 85365473 AC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33597905 2 + 192294377 AC i macFas5.chr3 C 0 C 0 s otoGar3.GL873611 2213479 2 - 8137123 AC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 267786 1 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 87977 0 - 21531802 C e manLeu1.NW_012101810v1 112376 0 - 2515279 C e cerAty1.NW_012002954v1 16951902 0 - 21915920 C e macNem1.NW_012019910v1 4359223 4567 - 9440265 I e rheMac8.chr3 33981340 0 + 185818997 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e gorGor5.CYUI01015914v1 73940 0 - 432965 C a score=-4743.000000 s hg38.chr7_KI270899v1_alt 112827 56 + 190869 AGTGTG-TTCAAAACGTCCG-CAG--CGACATT----CCGCTGTGAATCCATGAG-CTTGTTCCC s panTro5.chr7_NW_015973501v1_random 11266 62 - 19153 AATGTGGTTCAAAACGTCCGACAAGTCGACATTT--TCGCCTGTGAATC-ATGAGGCTTGTTCCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s macFas5.chr3 33597907 56 + 192294377 GGTGTT-TTCAAAACGTCCA-CAG--CTACATT----CCACTGTAAATGCAGGAG-TTTGTTCCT i macFas5.chr3 C 0 C 0 s otoGar3.GL873611 2213481 13 - 8137123 ---------------------------------GGGCTGCTTGTGA------------------- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 267786 1 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 87977 0 - 21531802 C e manLeu1.NW_012101810v1 112376 0 - 2515279 C e cerAty1.NW_012002954v1 16951902 0 - 21915920 C e macNem1.NW_012019910v1 4359223 4567 - 9440265 I e rheMac8.chr3 33981340 0 + 185818997 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e nomLeu3.chr20 129458 0 + 85365473 C e gorGor5.CYUI01015914v1 73940 0 - 432965 C a score=816.000000 s hg38.chr7_KI270899v1_alt 112883 1 + 190869 C s panTro5.chr7_NW_015973501v1_random 11328 1 - 19153 C i panTro5.chr7_NW_015973501v1_random C 0 C 0 s macFas5.chr3 33597963 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363790 1 - 9440265 C i macNem1.NW_012019910v1 I 4567 C 0 s cerAty1.NW_012002954v1 16951902 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87977 1 - 21531802 C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112376 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 267786 1 + 6586416 I e otoGar3.GL873611 2213494 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e rheMac8.chr3 33981340 0 + 185818997 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e nomLeu3.chr20 129458 0 + 85365473 C e gorGor5.CYUI01015914v1 73940 0 - 432965 C a score=9450.000000 s hg38.chr7_KI270899v1_alt 112884 4 + 190869 GGTG s panTro5.chr7_NW_015973501v1_random 11329 4 - 19153 GTTG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 73940 4 - 432965 GGTG i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33597964 4 + 192294377 GGTG i macFas5.chr3 C 0 T 25 s macNem1.NW_012019910v1 4363791 4 - 9440265 GGTG i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16951903 4 - 21915920 GGTG i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 87978 4 - 21531802 GGTG i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 112377 4 - 2515279 GGTG i manLeu1.NW_012101810v1 C 0 I 1 e colAng1.NW_012117710v1 267786 1 + 6586416 I e otoGar3.GL873611 2213494 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e rheMac8.chr3 33981340 0 + 185818997 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e nomLeu3.chr20 129458 0 + 85365473 C a score=-2949.000000 s hg38.chr7_KI270899v1_alt 112888 2 + 190869 TG s panTro5.chr7_NW_015973501v1_random 11333 2 - 19153 TG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 73944 2 - 432965 TG i gorGor5.CYUI01015914v1 C 0 C 0 s macNem1.NW_012019910v1 4363796 1 - 9440265 T- i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16951908 1 - 21915920 T- i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 87983 1 - 21531802 T- i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 112382 1 - 2515279 T- i manLeu1.NW_012101810v1 I 1 C 0 e colAng1.NW_012117710v1 267786 1 + 6586416 I e otoGar3.GL873611 2213494 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e macFas5.chr3 33597968 25 + 192294377 T e rheMac8.chr3 33981340 0 + 185818997 C e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e nomLeu3.chr20 129458 0 + 85365473 C a score=61417.000000 s hg38.chr7_KI270899v1_alt 112890 30 + 190869 TTCAAAACGTC----CGCAGCTACATTCTGCTGC s panTro5.chr7_NW_015973501v1_random 11335 33 - 19153 TTCAAAACCGCTTCTCGCA-CTACATTCTGCTGC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 73946 30 - 432965 TTCAAAACGTC----CGCAGCTACATTCTGCTGC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33981340 30 + 185818997 TTCAAAACGTC----CACAGCTACATTCCACTGT i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363797 30 - 9440265 TTCAAAACGTC----CACAGCTACATTCCACTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951909 30 - 21915920 TTCAAAACGTC----CACAGCTACATTCCGCTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 87984 30 - 21531802 TTCAAAACGTC----CACGGCTACATTCCGCTGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112383 30 - 2515279 TTCAAAACGTC----CACAGCTACATTCTGCTGT i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 267786 1 + 6586416 I e otoGar3.GL873611 2213494 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e macFas5.chr3 33597968 25 + 192294377 T e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e nomLeu3.chr20 129458 0 + 85365473 C a score=61459.000000 s hg38.chr7_KI270899v1_alt 112920 21 + 190869 AAGTTCAGGAGCTTGTTCCTA s panTro5.chr7_NW_015973501v1_random 11368 21 - 19153 AAGTTCAGGAGCTTGTTCCTA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 73976 21 - 432965 AAGTTCAGGAGCTTGTTCCTA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33981370 21 + 185818997 AAATGCAGGAGTTTGTTCCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33597943 21 + 192294377 AAATGCAGGAGTTTGTTCCTA i macFas5.chr3 T 25 C 0 s macNem1.NW_012019910v1 4363827 21 - 9440265 AAATGCAGGAGTTTGTTCCTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951939 21 - 21915920 AAATGCAGGAGTTTGTTCCTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88014 21 - 21531802 AAATGCTGGAGTTTGTTCCTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112413 21 - 2515279 AAATGCAGGAGTTTGTTCCTA i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 267786 1 + 6586416 I e otoGar3.GL873611 2213494 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I e nomLeu3.chr20 129458 0 + 85365473 C a score=39248.000000 s hg38.chr7_KI270899v1_alt 112941 15 + 190869 GGT-GACTCCGGCACA s panTro5.chr7_NW_015973501v1_random 11389 16 - 19153 GGTTGACGCCGGCACA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 73997 15 - 432965 GGT-GACTCCGGCACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129458 15 + 85365473 GGT-GGCTCCTGCACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981391 15 + 185818997 GGT-GGCTCCTGCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33597964 15 + 192294377 GGT-GGCTCCTGCACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363848 15 - 9440265 GGT-GGCTCCTGCACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951960 15 - 21915920 GGT-GGCTCCTGCACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88035 15 - 21531802 GGT-GGCTCCTGCACT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112434 15 - 2515279 GGT-GGCTCCTGCACT i manLeu1.NW_012101810v1 C 0 C 0 s otoGar3.GL873611 2213494 3 - 8137123 -----------GCA-- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 267786 1 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I a score=93513.000000 s hg38.chr7_KI270899v1_alt 112956 25 + 190869 TAGGCTGGAAACACTACACTCACCG s panTro5.chr7_NW_015973501v1_random 11405 24 - 19153 TAGGCTG-AAACACTACACTCACCG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74012 25 - 432965 TAGGCTGGAAACACTACACTCGCCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129473 25 + 85365473 TAGGCTGGAAACAATACACTCACCG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981406 25 + 185818997 TAGGCTGGAAACCCTACAGTCACCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33597979 25 + 192294377 TAGGCTGGAAACCCTACAGTCACCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363863 25 - 9440265 TAGGCTGGAAACCCTACAGTCACCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16951975 25 - 21915920 TAGGCTGGAAACCCTACAGTCACAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88050 25 - 21531802 TAGGCTGGGAACACCACCCTCACGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112449 25 - 2515279 TAGGCTGGAAACCCTACAGTCACAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267787 24 + 6586416 TAGGCTGG-AACACTAGACTCACTG i colAng1.NW_012117710v1 I 1 C 0 s otoGar3.GL873611 2213497 20 - 8137123 GAGGCCG-----ACGGCACCCACTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73155 63 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479039 63 - 2125214 I a score=195125.000000 s hg38.chr7_KI270899v1_alt 112981 35 + 190869 GGGGCTCAGCCCCGCACACCTGTGTGGGGAGGGAG s panTro5.chr7_NW_015973501v1_random 11429 34 - 19153 GGG-CTCAGTCCCCGACATCTGTGTGGGACGGGAC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74037 35 - 432965 GGGGCTCAGCCCCGCACACCTGTGTGGGGAGGGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129498 34 + 85365473 GGG-CTCAGCCCCGCACACCTGTGTGGGGAGGGAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981431 35 + 185818997 GGGGCTCAGCCCGGCACACATGTGTGGGCAGGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598004 35 + 192294377 GGGGCTCAGCCCGGCACACATGTGTGGGCAGGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363888 35 - 9440265 GGGGCTCAGCCCGGCACACCTGTGTGGGCAGGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952000 35 - 21915920 GGGGCTCAGCCCGGCACACCTGTGTAGGGAGGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88075 35 - 21531802 GGGGCTCAGCCCAGCACCCCTGTGTGGGGAGGGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112474 35 - 2515279 GGGGCTCAGCCCGGCACACCTGTGTAGGGAGGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267811 35 + 6586416 GGGGCTCAGCCCCGCACACCTGTGTGGAGAGGGAG i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 479102 35 - 2125214 GGGGCTCAGCCCAGTACACCTGTGTGGGGAGGGAG i cebCap1.NW_016107703v1 I 63 I 64 s aotNan1.NW_018514293v1 73218 35 + 376347 GGGGCTCAGCCCGGCACACCTGTGTGGGGAGGGAG i aotNan1.NW_018514293v1 I 63 C 0 s otoGar3.GL873611 2213517 13 - 8137123 -------AGCC----ACCCCTCTC----------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=23879.000000 s hg38.chr7_KI270899v1_alt 113016 4 + 190869 CGGG s panTro5.chr7_NW_015973501v1_random 11463 2 - 19153 --GG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74072 4 - 432965 CGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129532 4 + 85365473 CGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981466 4 + 185818997 CAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598039 4 + 192294377 CGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363923 4 - 9440265 CGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952035 4 - 21915920 CGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88110 4 - 21531802 CGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112509 4 - 2515279 CGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267846 4 + 6586416 CGGG i colAng1.NW_012117710v1 C 0 C 0 s aotNan1.NW_018514293v1 73253 4 + 376347 CGGG i aotNan1.NW_018514293v1 C 0 I 55 s otoGar3.GL873611 2213530 4 - 8137123 CAGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479137 64 - 2125214 I a score=76283.000000 s hg38.chr7_KI270899v1_alt 113020 18 + 190869 GAGCGTCGGGGAAGAAGG s panTro5.chr7_NW_015973501v1_random 11465 18 - 19153 GAGCGTCGGGGAAGAAGG i panTro5.chr7_NW_015973501v1_random C 0 I 38 s gorGor5.CYUI01015914v1 74076 18 - 432965 GAGCGTCGGGGAAGAAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129536 18 + 85365473 GAGCGTGGGGGAGGAAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981470 18 + 185818997 GAGCGTGGGGGAGGAAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598043 18 + 192294377 GAGCGTGGGGGAGGAAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363927 18 - 9440265 GAGCGTGGGGGAAGAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952039 18 - 21915920 GAGCGTGGGGGAGGAAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88114 18 - 21531802 GAGCATGGGGGAGCAAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112513 18 - 2515279 GAGCGTGGGGGAGGAAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267850 18 + 6586416 GAGCATGGGGGAGGAAGG i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2213534 5 - 8137123 --GCACG----------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73257 55 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479137 64 - 2125214 I a score=87565.000000 s hg38.chr7_KI270899v1_alt 113038 40 + 190869 AGGGGCCCGCCCCGTGAGACTGCGGCCAGGTCCTGCCCAC s gorGor5.CYUI01015914v1 74094 36 - 432965 AGGGGCCC----CTTGAGACTGCGGCCAGGTCCTGCCCAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129554 36 + 85365473 AGGGGCCC----CGCGAGACTGCGGCCAGGCCCTGCCCAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981488 32 + 185818997 AGGGGCCC----CGTGAGACTGTG----GGCCCTGCCCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598061 32 + 192294377 AGGGGCCC----CGTGAGACTGTG----GGCCCTGCCCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363945 32 - 9440265 AGGGGCCC----CGTGAGACTGTG----GGCCCTGCCCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952057 32 - 21915920 AGGGGCCC----CGTGAGACTGTG----GGCCCTGCCCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88132 32 - 21531802 AGGGGCCC----CGTGAGACTGTG----GGCCCTGCCCAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112531 32 - 2515279 AGGGGCCC----CGTGAGACTGTG----GGCCCTGCCCAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267868 17 + 6586416 AGGGGCC-----------------------CCCTGCCCAC i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2213539 14 - 8137123 ----GCCT----CATGGGGCTG------------------ i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73257 55 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479137 64 - 2125214 I e panTro5.chr7_NW_015973501v1_random 11483 38 - 19153 I a score=23679.000000 s hg38.chr7_KI270899v1_alt 113078 7 + 190869 GTGCCTG s panTro5.chr7_NW_015973501v1_random 11521 7 - 19153 GTGGCTG i panTro5.chr7_NW_015973501v1_random I 38 C 0 s gorGor5.CYUI01015914v1 74130 7 - 432965 GTGGCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129590 7 + 85365473 CTGGCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981520 7 + 185818997 CTGGATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598093 7 + 192294377 CTGGATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363977 7 - 9440265 CTGGATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952089 7 - 21915920 CTGGATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88164 7 - 21531802 CTGGATG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112563 7 - 2515279 CTGGATG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267885 7 + 6586416 CTGGATG i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2213553 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73257 55 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479137 64 - 2125214 I a score=119788.000000 s hg38.chr7_KI270899v1_alt 113085 17 + 190869 CTCTGCTGGGCTTGCAG s panTro5.chr7_NW_015973501v1_random 11528 17 - 19153 CTCTGCTGGGCTTGCAG i panTro5.chr7_NW_015973501v1_random C 0 I 92 s gorGor5.CYUI01015914v1 74137 17 - 432965 CTCTGCTGGGCTTGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129597 17 + 85365473 CTCTGCTGGGCTTGGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981527 17 + 185818997 CCCTGCTGGGCTTGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598100 17 + 192294377 CCCTGCTGGGCTTGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4363984 17 - 9440265 CCCTGCTGGGCTTGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952096 17 - 21915920 CCCTGCTGGGCTTGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88171 17 - 21531802 CCCTGCTGGGCTTGCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112570 17 - 2515279 CCCTGCTGGGCTTGCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267892 17 + 6586416 CCCTGCTGGGCTTGCAG i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 479201 17 - 2125214 CTCTGCTGGGCTTGCAA i cebCap1.NW_016107703v1 I 64 C 0 s aotNan1.NW_018514293v1 73312 17 + 376347 CTCTGCTGGGCTTGCAG i aotNan1.NW_018514293v1 I 55 C 0 s otoGar3.GL873611 2213553 12 - 8137123 ----GCAGGGCTGACA- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=300522.000000 s hg38.chr7_KI270899v1_alt 113102 52 + 190869 CCAGGCCACCTCCCTGGCCCGGACCCCTCAGGGCCTCTGGACAGGGGCTGCA s gorGor5.CYUI01015914v1 74154 52 - 432965 CCAGGCCACCTCCCTGGCCCGGACCCCTCAGGGCCTCTGGACAGGGGCTGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129614 52 + 85365473 CCAGGCCACCTCCCTAGCCCGGACCCCTCAGGGCCTCTGGACAGGGGCTGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981544 52 + 185818997 CCAGGCCACCTCCCTGGCCCGGACCCCTCAGGGCCTCTGGACAGGGGCTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598117 52 + 192294377 CCAGGCCACCTCCCTGGCCCGGACCCCTCAGGGCCTCTGGACAGGGGCTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364001 52 - 9440265 CCAGGCCACCTCCCTGGCCCGGACCCCTCAGGGCCTCTGGACAGGGGCTGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952113 52 - 21915920 CCAGGCCACCTCCCTGGCCCGGACCCCTCAGGGCCTCTGGACAGGGGCTGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88188 45 - 21531802 CCAGGCCACCTCCCTGGCCTGGACCCCTCAGGGCCTCTGGACAGG------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112587 52 - 2515279 CCAGGCCACCTCCCTGGCCCGCACCCCTCAGGGCCTCTGGACAGGGGCTGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267909 52 + 6586416 CCAGGCCACCTCCCTGGCCCGGACCCCTCAGGGCCTCTGGACAGGGGCTGCA i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 479218 52 - 2125214 CCAGGCCACCGCCCCGGCCTGGACCCCTCAGGGCCTCTGGACAGGGGCTGTA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 73329 52 + 376347 CCGGGCCACCTCCCCGGCCCGGACCCCTCAGGGCCTCTGGACAGGGGCTGTA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2213565 12 - 8137123 ----------------------------------------ACGGGTGCTGCA i otoGar3.GL873611 C 0 I 9 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C e panTro5.chr7_NW_015973501v1_random 11545 92 - 19153 I a score=101948.000000 s hg38.chr7_KI270899v1_alt 113154 17 + 190869 GGCTGCCTCTGGACTCT s gorGor5.CYUI01015914v1 74206 17 - 432965 GGCTGCCTCTGGACTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129666 17 + 85365473 GGCTGCCTCTGGACTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981596 17 + 185818997 GGCTGCCTCTGGACCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598169 17 + 192294377 GGCTGCCTCTGGACCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364053 17 - 9440265 GGCTGCCTCTGGACCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952165 17 - 21915920 GGCTGCCTCTGGACCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88233 17 - 21531802 GGCTGCCTCTGGACTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112639 17 - 2515279 GGCTGCCTCTGGACCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267961 17 + 6586416 GGCTGCCTCTGGACCCT i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 479270 17 - 2125214 GGCTGCCTCTGGGCTCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 73381 17 + 376347 GGCTGCCTCTGGGCTCT i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2213577 9 - 8137123 I e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C e panTro5.chr7_NW_015973501v1_random 11545 92 - 19153 I a score=150103.000000 s hg38.chr7_KI270899v1_alt 113171 27 + 190869 GCTCCTGGACTGG-CCTCTGCTGGACGG s gorGor5.CYUI01015914v1 74223 27 - 432965 GCTCCTGGACTGG-CCTCTGCTGGACGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129683 27 + 85365473 GCTTCTGGACTGG-CCTCTGCTGGACGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981613 27 + 185818997 GCTCCTGGACCAG-CCTCTGCTGGAGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598186 27 + 192294377 GCTCCTGGACCAG-CCTCTGCTGGAGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364070 27 - 9440265 GCTCCTGGACCAG-CCTCTGCTGGAGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952182 27 - 21915920 GTTCCTGGACCAG-CCTCTGCTGGAGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88250 27 - 21531802 GCTCCCGGACCAG-CCTCTGCTGGACGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 112656 27 - 2515279 GCTCCTGGACCAG-CCTCTGCTGGAGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 267978 27 + 6586416 GCTCCCGGACCAG-CCTCTGCTGGACAG i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 479287 27 - 2125214 GCTTTTGGACTGG-TCTCTGCTGGATGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 73398 27 + 376347 GCTTTTGGACCCG-TCTCTGCTGGATGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2213586 28 - 8137123 GCATTTGGAGTGGCCCTCTCCTGGGTGG i otoGar3.GL873611 I 9 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C e panTro5.chr7_NW_015973501v1_random 11545 92 - 19153 I a score=1526373.000000 s hg38.chr7_KI270899v1_alt 113198 273 + 190869 CGGCGCCCTG------CACCTCAA---CAGCCAGCCACACCAG----------GCATGGCC----GTCACCTACA--------GGTGAA--GCTACAAATTTAACCTCATATAAGGGA-ATATAACCATGGCCAAGGA--GCGAGGCAAGGCTTTTT--AAACAACATGTCAACAGCA-CAAATCAGAGGCAAGTGAGAA-CCAAGTTTTAAAAAGATGAATGT--GGTATAATCAGCATTAAAGTTT-CCTGTTCGG-TCTGGGACTCCTTGGACCAAGCATTACTG-GGAGGCAACC---------------------------------------------------------------------------------------------------------------TGAATGCCCTCGGTGTGA--G s panTro5.chr7_NW_015973501v1_random 11637 294 - 19153 CGGCGCCCTAGTCACTCAGCTCAAACACTGCCAGCCACACCAG-----------CATGGCCTGCCGGCACCTACA------CAGGTGGAATGCTACAAATTTAACCTCATATAAGAGATATATAAC-ATG-CCAAGGACGGCGAGGCAAGGCTTTTT--AAACAACATGTCCACAGCAACAAATCAGAGGCAAGTGAGAA-CCAAGTTTTAAAAAGATAAATGTCGGGTATAATCACCATTAAAGTTTTCCTGTTCGGCTCCGGGACTCCTTGGACCAAGCAT-ACTGCGGAGGCAACC---------------------------------------------------------------------------------------------------------------TGAATGGC-TCGGTGTGA--G i panTro5.chr7_NW_015973501v1_random I 92 C 0 s gorGor5.CYUI01015914v1 74250 273 - 432965 CGGCGCCCTG------CACCTCAA---CAGCCAGCCACACCAG----------GCATGGCC----GTCACCTACA--------GGTGAA--GCTACAAATTTAACCTCATATAAGGGA-ATATAACCATGGCCAAGGA--GCGAGGCAAGGCTTTTT--AAACAACATGTCAACAGCA-CAAATCAGAGGCAAGCGAGAA-CCAAGTTTTAAAAAGATGAATGT--GGTATAATCAGCATTAAAGTTT-CCTGTTCGG-TCTGGGACTCCTTGGACCAAGCATTACTG-GGAGGCAAAC---------------------------------------------------------------------------------------------------------------TGAATGCCCTCGGTGTGA--G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129710 273 + 85365473 TGGCGCCCTG------CACCTCAA---CAGCCAGCCACACCAG----------GCACAGCC----GTCACCTACA--------GGTGAA--GCTACAAATTTAACCTCATACAAGGGA-ATATAACCATGGCCAAGGG--GCAAGGCAAGGCTTTTT--AAACAACACGTCAACAGCA-CAAATCAGAGGCAAGAGAGAA-CCAAGTTTTAAAAAGATGAATGT--GGTATAATCAGCATTAAAGTTT-CCTGTTCGT-TCTGGGACTCCTTGGACCAAGCATTACTG-GGAGGCAACC---------------------------------------------------------------------------------------------------------------TGAATGCCCTTGGTGAGA--G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981640 281 + 185818997 CAGCGCCCTG------CACCTTAA---CAGCCGGCCACACCAGGCCACACCGGGCACGGCT----GTCACCTACA--------GGTGAA--GCCACAAATTTAACCTCAGATAAGGGA-ATATAATCACG-GCAAGGA--GCAAGGCCAGGCTTTTT--AAACAGCACGTCAACAGCA-CAAACCAGAGGCAAGAAAGAA-CCAAGTTTTAGAAAGATGAATGT--GGTATAATCAGCGTTAAAGTTT-CCTGTTCAG-TCTGGGACTCCTTGGACAAAGCATTACTG-GGAGGCAACC---------------------------------------------------------------------------------------------------------------TGAATGTCCTTGGTGTGA--- i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33598213 281 + 192294377 CAGCGCCCTG------CACCTTAA---CAGCCGGCCACACCAGGCCACACCGGGCACGGCT----GTCACCTACA--------GGTGAA--GCCACAAATTTAACCTCAGATAAGGGA-ATATAATCACG-GCAAGGA--GCAAGGCCAGGCTTTTT--AAACAGCACGTCAACAGCA-CAAACCAGAGGCAAGAAAGAA-CCAAGTTTTAGAAAGATGAATGT--GGTATAATCAGCGTTAAAGTTT-CCTGTTCAG-TCTGGGACTCCTTGGACGAAGCATTACTG-GGAGGCAACC---------------------------------------------------------------------------------------------------------------TGAATGTCCTTGGTGTGA--- i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4364097 281 - 9440265 CAGCGCCCTG------CACCTTAA---CAGCCGGCCACACCAGGCCACACCGGGCACGGCT----GTCACCTACA--------GGTGAA--ACCACAAATTTAACCTCAGATAAGGGA-ATATAATCACG-GCAAGGA--GCAAGGCCAGGCTTTTT--AAACAGCACGTCAACAGCA-CAAACCAGAGGCAAGAAAGAA-CCAAGTTTTAGAAAGATGAATGT--GGTATAATCAGCGTTAAAGTTT-CCTGTTCAG-TCTGGGACTCCTTGGACGAAGCATTACTG-GGAAGCAACC---------------------------------------------------------------------------------------------------------------TGAATGTCCTCGGTGTGA--- i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 16952209 355 - 21915920 CGGCGCCCTG------CACCTTAA---CAGCCAGCCACACCAGGCCACACCGGGCACGGCT----GTCACCTACA--------GGTGAA--GCCACATATTTAACCTCAGATAAGGGA-ATATAATCTCG-GCAAGGA--GCAAGGCCAGGCTTTTT--AAACAGCACGTCAACAGCA-CAAACCAGAGGCAAGAGAGAA-CCAAGTTTTAGAAAGATGAATGT--GGTATAATCAGCGTTAAAGTTT-CCTGTTCAG-TCTGGGACTCCTTGGATGAAGCATTACTG-GGAGGCAACC-------------------------------------TGAATGTCCTCGGTGTGAGAATTACTGGAAGGCAACCTGAATATCCTCAGTGTGAGAATTACTAGGAGGCAACATGAATGTCCTCGGTGTGA--- i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 88277 282 - 21531802 CAGCGCCCTG------CACCTCAA---CAGCTGGCCACACCAGGCCACGCCGGGCACGGTT----GTCACCTACA--------GGGGAA--GCCACAAATTTAACCTCAGACAAGGGA-ATACAATCACG-GCAAGGA--GCAAGGCCAGGCTTTTT--AAACAGCACGTCAACGGCA-CAAACCAGAGGCAAGAGAGAA-CCAAGTTTTAAAAAGAGGAATGT--GGTATAATCAGCGTTAAAGTTA-CCTGTTCGG-TCTGGGACTCCTTGGACCAAGCATTACTG-GGAGGCAACC---------------------------------------------------------------------------------------------------------------TGAATGTCCTCGGTGTGTG-- i chlSab2.chr28 C 0 I 37 s manLeu1.NW_012101810v1 112683 282 - 2515279 TGGCGCCCTG------CACCTTAA---CAGCCAGCCACACCAGGCCACACCGGGCACGGCT----GTCACCTACA--------GGTGAA--GCCACAAATTTAACCTCAGATAAGGGA-ATATAATCACG-GCAAGGA--GCAAGGCCAGGCTTTTT--AAACAGCACGTCAACAGCA-CAAACCAGAGGCAAGAGAGAA-CCAAGTTTTAGAAAGATGAATGT--GGTATAATCAGCGTTAAAGTTT-CCTGTTCGG-TCTGGGACTCCTTGGACGAAGCATTACTG-GGAGGCAACC---------------------------------------------------------------------------------------------------------------TGAATGTCCTCGGTGTGAG-- i manLeu1.NW_012101810v1 C 0 I 211 s colAng1.NW_012117710v1 268005 356 + 6586416 CGGTACCCTG------CACCTCAA---CAGCCGGCCACACCAGGCCACACTGGGCACGGCT----GTCACCTACA--------GGGGAA--GCCACAAATTTAACCTCAGATAAGGGA-ATATAATCACA-GCAAGGA--GCAAGGCCTGGCTTTTT--AAACAGCACGTCAGCAGCA-CAAACCAGAGGCAAGAGAGAA-CCAAGTTTTAAAAACAGGAATGT--AGTATAATCAGTGTTAAAGTTT-CCTGTTCAA-TCTGGGACTCCTTGGACCAAGCATTATTG-GGAGGCAGCCTGAATGTCCTCGGTGTGAGAATTACTGGGAGGCAGCCTGAATGTCCTCGGTGTGGGAATTACTGGGAGGCAACC-------------------------------------TGAATGCCTTCGGTGTGA-G- i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 479314 262 - 2125214 CGGCACCCTG------CACCTCAA---CAGCTGG-------------------GCGCAGCT----GTCACCTAAAGACTCAAAGGTGAA--GCTACAAATTTAACCTAATATAGGGGA-ATATAATCATGGCCAAGGA--GCAAGGCAAGGCTTTTT--AAACAGCATGTCAATAGCA-CAAATCAGAGGCAAGAGAGAA-CCAAGCTTTAAAAAGATCAATGT--GGTATAATCAGCATTAAAGTTT-CCTGCTCAG-TCCAGGACTCCTTGGGC---------CTG-GGAGACAACC---------------------------------------------------------------------------------------------------------------CGAATGCCCTTGGTGTGA--- i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 73425 249 + 376347 CGGCGCCCTG------CACCTCAA---CAGCTGG-------------------GCACAGCT----GTCATCTAAAGACTCAAAGGTGAA--GCTACAAATTTAACCTAATATAGGGGA-ATATAAT---------------CAAGGCAAGGCTTTTT--AAACAGCATGTCAATAGCA-CAAATCAGAGGCAAGAGAGAA-CCAAGCTTTAAAAAGATCAATGT--GGTATAATCAGCATTAAAGTTT-CTTGTTCAG-TCCAGGACTCCTTGGGC---------CTG-GGAGGCAACC---------------------------------------------------------------------------------------------------------------TGAATGCCCTCAGTGTGA--- i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 2213614 279 - 8137123 TGGGTGCCTG------CACCTCAG---CAGCTGGCCACCCTGGG---------GTATGGCT----GCCACCAAAG--ACCCAAAGTAAA--GTTATAAATTCAGGGTATCATAAGGG--GTATACTCACAGCCAAGGA--GCAGACAAGGACTTTTTAAAAATAAGATGTCAACAGTA-CAAATCCGAGACAAAGGAGAAGTCTATTTCTAAAAAGATAAATGT--GATAACATCAACATTAAGGGTT-TCTGTTCAG-GGAGGGAC-ACTTGGAGAAAGCGTTTTTC-AATGGCACCT---------------------------------------------------------------------------------------------------------------TGAGCCTGTGAAGTAAG---- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=-5643.000000 s hg38.chr7_KI270899v1_alt 113471 2 + 190869 CG s panTro5.chr7_NW_015973501v1_random 11931 2 - 19153 CG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74523 2 - 432965 CG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129983 1 + 85365473 T- i nomLeu3.chr20 C 0 C 0 s chlSab2.chr28 88596 1 - 21531802 -A i chlSab2.chr28 I 37 I 1 s colAng1.NW_012117710v1 268361 1 + 6586416 -G i colAng1.NW_012117710v1 C 0 I 1 s cebCap1.NW_016107703v1 479577 1 - 2125214 -A i cebCap1.NW_016107703v1 I 1 I 1 s aotNan1.NW_018514293v1 73675 1 + 376347 -A i aotNan1.NW_018514293v1 I 1 I 1 s otoGar3.GL873611 2213893 1 - 8137123 C- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e manLeu1.NW_012101810v1 112965 211 - 2515279 I e cerAty1.NW_012002954v1 16952564 1 - 21915920 I e macNem1.NW_012019910v1 4364378 1 - 9440265 I e macFas5.chr3 33598494 1 + 192294377 I e rheMac8.chr3 33981921 1 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C a score=688927.000000 s hg38.chr7_KI270899v1_alt 113473 124 + 190869 T-GGAAAGATGGC-AGCTTCAAGGCTGGGCTCCGCAGTGGGG-CAGGCCCCGCCCTGGACGAGCACG-CG----------------GCCACACAG-----------------AGGG--------------TCCTCTTGAGCACGGTGACTCCCGTACCCGTAA-CAGTCAGGCCGa s panTro5.chr7_NW_015973501v1_random 11933 126 - 19153 TTGGAAAGATGGCCAGCTTCA-GGCTGGGCTCCGCAGTGGGGACAGGCCGCCCCCTGGAC-AGCACGGCT----------------GGCACACAG-----------------AGGG--------------TCCTCTCCAGCACGG-GACTCCCGTACCGCTAAACAGTCAGGCCGA i panTro5.chr7_NW_015973501v1_random C 0 I 1 s gorGor5.CYUI01015914v1 74525 123 - 432965 T-GGAAAGATGGC-AGCTTCAAGGCTGGGCTCCGCAGTGGGG-CAGGCCCCGCCGTGGACGAGCACG-CG----------------GCCACACGG-----------------AAGG--------------TCCTCTCGAGCACGGTGACTCCC-TACCCATAA-CAGTCAGGCCGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 129984 123 + 85365473 --GGAAAGATGGC-GGCTTCAAGGCTGGGATCCGCAGTGGGG-CAGGCCCAGCCCTGGACGAGCACC-TG----------------GCCACACAG-----------------AGGG--------------TCCTCTTGAGCACGGTGACTCCTGTACCCATAA-CAGTCAGGCTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33981922 121 + 185818997 -TGGAAAGATGGC-AGCTTCGAGGCTGGGCTCCGCAGTGGGG-CAGGCCCAGCCCGGGACGAGCACG-CA----------------GCCACACGG-----------------AGGG--------------TCCT-CTGAGT-CGGTGACTCCTGCACCCATAA-C-GTCAGGCTGG i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33598495 124 + 192294377 -TGGAAAGATGGC-AGCTTCGAGGCTGGGCTCCGCAGTGGGG-CAGGCCCAGCCCGGGACGAGCACG-CG----------------GCCACACGG-----------------AGGG--------------TCCTCCTGAGCACGGTGACTCCTGCACCCATAA-CAGTCAGGCTGG i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4364379 124 - 9440265 -TGGAAAGATGGC-AGCTTCGAGGCTGGGCTCCGCAGTGGGG-CAGGCCCAGCCCGGGACGAGCACG-CG----------------GCCACACGG-----------------AGGG--------------TCCTCCTGAGCACGGTGACTCCTGCACCCATAA-CAGTCAGGCTGG i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16952565 124 - 21915920 -TGGAAAGATGGT-AGCTTCGAGGCTGGGCTCCGCAGTGGGG-CAGGCCCAGCCCGGGACGAGCACA-CG----------------GCCACACGG-----------------AGGG--------------TCCTCCTGAGCACGGTGACTCCTGCACCCATAA-CAGTCAGGCTGG i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 88598 124 - 21531802 -TGGAAAGATGGC-AGCTTCGAGGCTGGGCTCCGCAGTGGGG-CAGGCCCAGCCCGGGACGAGCACA-CG----------------GCCACACGG-----------------AGGG--------------TCCTCCTGAGCACGGTGACTCCTGCACCCATAA-CAGTCAGGCTGG i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 113176 124 - 2515279 -TGGAAAGATGGT-AGCTTCAAGGCTGGGCTCCGCAGTGGGG-CAGGCCCAGCCCGGGACGAGCACG-CG----------------GCCACACGG-----------------AGGG--------------TCCTCCTGAGCACGGTGACTCCTGCACCCATAA-CAGTCAGGCTGG i manLeu1.NW_012101810v1 I 211 C 0 s colAng1.NW_012117710v1 268363 124 + 6586416 -TGGAAAGATGGC-AGCTTCGAGGCTGGGCTCCGCAGTGGGG-CAGGCCCAGCCCGGGACGAGCACG-CG----------------GCCACACGG-----------------AGGG--------------TCCTCCTGAGCACGACGATTCCTGCACCCATAA-CAGTCAGGCTGG i colAng1.NW_012117710v1 I 1 C 0 s cebCap1.NW_016107703v1 479579 124 - 2125214 -GGGACAGATGGC-AGCTCAAAGGCTGGGCTCTGCAGCAGGG-CAGGCCCAGCCCCGGACAAGCACT-CG----------------GCCACACAG-----------------AGGG--------------TCCTCTTCAGCATGGTGACTCCTGTACCCACAG-CAGTCTCGCTGA i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 73677 122 + 376347 -GGGACAGATGGC-AGCTCCAAGGCCGGGCTCTGCAGCGGGG-CAGGCCCAG-CCTGGACGAGCACG-CG----------------GCCACACAG-----------------AGGG--------------TCCTCTTCAGCATGGTGAC-CCTGTACCCACAA-CAGTCTCCCTGA i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2213894 164 - 8137123 ------AGATGG--AGCGCTGAAGTGGCTCCCCGTGGGGGGA-C-GGCCATGTGCCAGAGGAGCACG-TGCTGCGTGGGAGCTCTTCCCACGCAGTGCTGGATGGGAGTCCCAGGGAGCAGCGCATCGCATCACCTTCAGCTTAGCATGTCCAGTACCTCTGG-CAGTTGTACTAA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=137896.000000 s hg38.chr7_KI270899v1_alt 113597 20 + 190869 ttcttc-aaga--aaacatacaa s panTro5.chr7_NW_015973501v1_random 12060 23 - 19153 TTCTTCCAAGACAAAACATACAA i panTro5.chr7_NW_015973501v1_random I 1 C 0 s gorGor5.CYUI01015914v1 74648 20 - 432965 TTCTTC-AAGA--AAACATACCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 130107 20 + 85365473 TTCTTC-AAGA--AAACGTACAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33982043 20 + 185818997 TTCTTT-GAGA--AAATGTACAA i rheMac8.chr3 C 0 I 11 s macFas5.chr3 33598619 20 + 192294377 TTCTTT-GAGA--AAATGTACAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364503 20 - 9440265 TTCTTT-GAGA--AAATGTACAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952689 20 - 21915920 TTCTTT-GAGA--AAATGCACAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88722 20 - 21531802 TTCTTC-GAGA--AAACGTACAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113300 20 - 2515279 TTCTTT-GAGA--AAATGTACAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 268487 20 + 6586416 TTCTTC-AAGG--AAACGTACAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27 20 + 138751 TTTTTA-GAGA--AAAATAACAA i calJac3.chrUn_GL286444 N 0 C 0 s cebCap1.NW_016107703v1 479703 20 - 2125214 TTCTTC-AAGA--AAACATACAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 73799 20 + 376347 TTCTTC-AAGA--AAACATACAA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2214058 20 - 8137123 CTCTTC-AAGA--AAACGTACAA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=39843.000000 s hg38.chr7_KI270899v1_alt 113617 12 + 190869 a-ctaaaagatgt-- s panTro5.chr7_NW_015973501v1_random 12083 13 - 19153 AACTAAAAGATGT-- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74668 12 - 432965 A-CTAAAAGATGT-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 130127 12 + 85365473 A-CTAGAAGACGC-- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33598639 12 + 192294377 A-CGAAAAGACGT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364523 12 - 9440265 A-CGAAAAGACGT-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952709 12 - 21915920 A-CGAAAAGACGT-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88742 12 - 21531802 A-CTAAACGACGT-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113320 12 - 2515279 A-CGAAAAGACGT-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 268507 12 + 6586416 A-CTAAACGACGT-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 47 12 + 138751 A-GGAAAGTTTTT-- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 479723 12 - 2125214 A-CTGAAAGATAT-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 73819 12 + 376347 A-CTGAAAGATGT-- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2214078 14 - 8137123 -GCTAAGAGTTGTAT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e rheMac8.chr3 33982063 11 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C a score=329674.000000 s hg38.chr7_KI270899v1_alt 113629 57 + 190869 caaaca---cagcaaattggctgcc-catggagaagggTG-GGAACCAAGAGA-GGCACTGGC s panTro5.chr7_NW_015973501v1_random 12096 61 - 19153 CAA-CATTTCAGCAAAT-GGCTGCCGCATGGAGAAGGGTGTGGAACCAAGAGAAGGCACTGGG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74680 57 - 432965 CAAACA---CAGCAAATTGGCTGCC-CATGGAGAAGGGTG-GGAACCAAGAGA-GGCACTGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 130139 48 + 85365473 CCAACA---CAGCAAACAGGCTGCC-CATGGAGAAGGGCG-GGAAC----------CACTGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33982074 56 + 185818997 CAAACA---CAGCAAATTGGCTGCC-CAT-GGGAAGGGTG-GGAACCAAGAGA-GGCACTGGC i rheMac8.chr3 I 11 C 0 s macFas5.chr3 33598651 57 + 192294377 CAAACA---CAGCAAATTGGCTGCC-CATGGGGAAGGGTG-GGAACCAAGAGA-GGCACTGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364535 57 - 9440265 CAAACA---CAGCAAATTGGCTGCC-CATGGGGAAGGGTG-GGAACCAAGAGA-GGCACTGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952721 57 - 21915920 CAAACA---CAGCAAATCGGCTGCC-CATGGGGAAGGGTG-GGAACCAAGAGA-GGCACTGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88754 57 - 21531802 CAAACA---CAGCAAATCGGCTGCC-CATGGGGAAGGGTG-GGAACCAAGAGA-GGCACTGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113332 57 - 2515279 CAAACA---CAGCAAATCGGCTGCC-CATGGGGAAGGGTG-GGAACCAAGAGA-GGCACTGGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 268519 56 + 6586416 CAAACA---CAGCAAATCAGCTGCC-CATGGGGAAGGGTG-GGAA-CAAGAGA-GGCACTGGC i colAng1.NW_012117710v1 C 0 M 405 s calJac3.chrUn_GL286444 59 51 + 138751 TAAAAC---CCGCAAATTGGTT----CACAGGAAA--ATT-GAATCCAAGAAG-GGCA-TGGC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 479735 57 - 2125214 CAAACA---CAGCAAATCGGCTGCC-CATGGGGAAGGGTG-GGAACCAAGAGA-GGCACTGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 73831 57 + 376347 CAGACA---CAGCAAATCGGCTGCC-CATGGGGAAGGGTG-GGAACCAAGGGA-GGCACTGGC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2214092 38 - 8137123 CAGATG---CTGCAGAACAGCCACC-C-CAGGGAGGTGCA-GTC------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=145809.000000 s hg38.chr7_KI270899v1_alt 113686 33 + 190869 AGGAAAGGGGACCAGTCG-GTGAGTGGAGAG-AAC s panTro5.chr7_NW_015973501v1_random 12157 33 - 19153 CCAGAAGGGGACCAGTCGCGTGAGTG-AGAG-AAC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74737 33 - 432965 AGGAAAGGGGACCAGTCG-GTGACTGGAGAG-AAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 130187 33 + 85365473 AGGAAAGGGGACCAGTCA-GTGAGTGGAGAG-AAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33982130 33 + 185818997 AGGAAGGGGGA-CAGTCG-GTGGGTGGAGGGAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598708 33 + 192294377 AGGAAGGGGGACCAGTCG-GTGGGTGGAGGG-AAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364592 33 - 9440265 AGGAAGGGGGACCAGTCG-GTGGGTGGAGGG-AAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952778 33 - 21915920 GGGAAGGGGGACCAGTCG-GTGGGTGGAGGG-AAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88811 33 - 21531802 GGAAAGGGGGACCAGTCG-GTGGGTGGAGAG-AAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113389 33 - 2515279 GGGAAGGGGGACCAGTCG-GTGGGTGGAGGG-AAC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 110 31 + 138751 -CAAAAAGGGATCAGTC--CTTAATGGAGAA-ATG i calJac3.chrUn_GL286444 C 0 I 4 s cebCap1.NW_016107703v1 479792 26 - 2125214 -AGGAAAGGGAGTGG-------AGTGGAGAG-AAC i cebCap1.NW_016107703v1 C 0 I 6 s aotNan1.NW_018514293v1 73888 32 + 376347 -AGGAAAGGGATCAGTCG-GCGAGTGGAGAG-AAC i aotNan1.NW_018514293v1 C 0 M 6203 s otoGar3.GL873611 2214130 30 - 8137123 ---ATAAGGGACCGGTCA-GCGAGTGGACAG-GAT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 268575 405 + 6586416 M e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=85021.000000 s hg38.chr7_KI270899v1_alt 113719 18 + 190869 CTGAGG-GTCTGTGGGGCC s panTro5.chr7_NW_015973501v1_random 12190 19 - 19153 CTGAGGCGTCTGTGGGGCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74770 18 - 432965 CTGAGG-GTCTGTGGCGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 130220 18 + 85365473 CCGAGG-GTCTGTGGGGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33982163 18 + 185818997 CCAAGC-CTCTGTGGGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598741 18 + 192294377 CCAAGC-CTCTGTGGGGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364625 18 - 9440265 CCAAGC-CTCTGTGGGGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952811 18 - 21915920 CCAAGC-CTCTGTGGGGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 88844 18 - 21531802 CCAAGG-CTCTGTGGGGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113422 18 - 2515279 CCAAGC-CTCTGTGGGGCC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 145 18 + 138751 CCAAAG-TTTTGTGGGGCA i calJac3.chrUn_GL286444 I 4 C 0 s cebCap1.NW_016107703v1 479824 18 - 2125214 CTGAGG-ATCTGTGGGGCC i cebCap1.NW_016107703v1 I 6 C 0 s otoGar3.GL873611 2214160 17 - 8137123 -CTGGG-GTCTGCTGGGCC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 268575 405 + 6586416 M e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C a score=360483.000000 s hg38.chr7_KI270899v1_alt 113737 90 + 190869 AGCTTTCCCAGGTGCTAAGGAACAGG-AC-CTCAGATCTCTGAAGCTAAGGGCTGGGGgag-cagaggagggaagat-gggaaagaggg-aggga------- s panTro5.chr7_NW_015973501v1_random 12209 93 - 19153 AGCTTTCCCAGGTGCTAAGGAACAGGCACGCTCAGATCTCTGAAGCTAAGGGCTGGGGGAGGCAGAGGAGG-AAGAT-GGGAAAGAGGGCAGGGA------- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74788 90 - 432965 AGCTTTCCCAGGTGCCAAGGAACAGG-AC-CTCAGACCTCTGAAGCTAagggctgggggag-cagaggagggaagat-gggaaagaggg-aggga------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 130238 90 + 85365473 AGCTTTCCCAGGTGCTGAGGAACAGG-AC-CTCAGATCTCTGAAGCTAAGGGCCAGGGGAG-CAGAGGAGGGAAGAT-GGGAAAGAAGG-AGGAA------- i nomLeu3.chr20 C 0 I 122 s rheMac8.chr3 33982181 88 + 185818997 AGCTTTCCGGGGTGCTAAGGAAGAGG-AC-CACAGATCTCCACAGCTAAGGGCCa-gggag-gcagggagggaagat--ggaaagagga-ggcga------- i rheMac8.chr3 C 0 I 13 s macFas5.chr3 33598759 89 + 192294377 AGCTTTCCCGGGTGCTAAGGAAAAGG-AC-CACAGATCTCCACAGCTAAGGGCCa-gggag-cagaggagggaagat-gggaaagaggg-aggga------- i macFas5.chr3 C 0 I 13 s macNem1.NW_012019910v1 4364643 89 - 9440265 AGCTTTCCCGGGTGCTAAGGAAGAGG-AC-CACAGATCTCCACAGCTAAGGGCCA-GGGAG-CAGAGGAGGGAAGAT-GGGAAAGAGGG-AGGGA------- i macNem1.NW_012019910v1 C 0 I 13 s cerAty1.NW_012002954v1 16952829 89 - 21915920 AGCTTTCCCAGGTGCTAAGGAAGAGG-AC-CACAGATCTCCACAGCTAAGGGCCa-gggag-cagaggagggaagat-gggaaagaggg-aggga------- i cerAty1.NW_012002954v1 C 0 I 13 s chlSab2.chr28 88862 89 - 21531802 AGCTTTCCGGGTTGCTAAGGAAGAGG-AC-CACAGATCTCCACAGCTAAGGGCCa-gggag-cagaggagggaagat-gggaaagaagg-aggga------- i chlSab2.chr28 C 0 I 161 s manLeu1.NW_012101810v1 113440 89 - 2515279 AGCTTTCCCAGGTGCTAAGGAAGAGG-AC-CACAGATCTCCACAGCTAAGGGCCA-GGGAG-CAGAGGAGGGAAGAT-GGGAAAgaggg-aggga------- i manLeu1.NW_012101810v1 C 0 I 13 s calJac3.chrUn_GL286444 163 90 + 138751 A---TTTTCAGGAACTAAGGAGGGGA----CTTTGACCTTT-CCCCTAGGGCCGgggggag-atgag--aggaagataggaaaagaggg-aggagggaggga i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 479842 97 - 2125214 AGCTTTCCCAGGAGCTAAGGAAGAGG-AC-CTCAGACCTCTGCACCTAagggccgggggag-ctgaggagggaagat-gggaaagaggg-aggagggaggga i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 268575 405 + 6586416 M e otoGar3.GL873611 2214177 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C a score=120450.000000 s hg38.chr7_KI270899v1_alt 113827 38 + 190869 ggagt-agggagg-gagtgggag--------------------------------gtgga--gag-----------------------gaaggg--agg s panTro5.chr7_NW_015973501v1_random 12302 44 - 19153 GGAGTTAGGGAGGCGAGTGGCGG--------------------------------GAGGGAGGAG-----------------------GAAGGGGGAGG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74878 38 - 432965 ggagt-agggagg-gagtgggag--------------------------------gggga--gag-----------------------gaaggg--agg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33982282 36 + 185818997 -gagt-agggagg-gagaggga---------------------------------gggga--gag-----------------------gaaggg--agg i rheMac8.chr3 I 13 I 79 s macFas5.chr3 33598861 38 + 192294377 ggagt-agggagg-gagagggag--------------------------------gggga--gag-----------------------gaaggg--aga i macFas5.chr3 I 13 C 0 s macNem1.NW_012019910v1 4364745 70 - 9440265 ggagt-agggagg-gagagggagggggagaggaagggagggggagaggaagggaggggga--gag-----------------------gaaggg--aga i macNem1.NW_012019910v1 I 13 C 0 s cerAty1.NW_012002954v1 16952931 38 - 21915920 ggagt-agggagg-gagagggag--------------------------------gggga--gag-----------------------gaaggg--agg i cerAty1.NW_012002954v1 I 13 C 0 s chlSab2.chr28 89112 38 - 21531802 ggagg-agggagg-gagtgggag--------------------------------gggga--gag-----------------------gaaggg--agg i chlSab2.chr28 I 161 I 21 s manLeu1.NW_012101810v1 113542 61 - 2515279 ggagt-agggagg-aagagggag--------------------------------gtgga--gaggaagggagggggagaggaagggagaaggg--agg i manLeu1.NW_012101810v1 I 13 I 21 s calJac3.chrUn_GL286444 253 38 + 138751 agaat-agggagg-gaatgggag--------------------------------ggaga--cag-----------------------gaagag--agg i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 479939 38 - 2125214 ggagt-aaagagg-gagtgggag--------------------------------ggaga--gag-----------------------gaaggg--agg i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 268575 405 + 6586416 M e otoGar3.GL873611 2214177 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 130328 122 + 85365473 I a score=10885.000000 s hg38.chr7_KI270899v1_alt 113865 5 + 190869 aggga s panTro5.chr7_NW_015973501v1_random 12346 5 - 19153 AGGGA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74916 5 - 432965 aggga i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33598899 5 + 192294377 aggga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364815 5 - 9440265 aggga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952969 3 - 21915920 --ggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 89171 5 - 21531802 aggga i chlSab2.chr28 I 21 C 0 s manLeu1.NW_012101810v1 113624 5 - 2515279 aggga i manLeu1.NW_012101810v1 I 21 C 0 e colAng1.NW_012117710v1 268575 405 + 6586416 M e otoGar3.GL873611 2214177 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e rheMac8.chr3 33982318 79 + 185818997 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 479977 0 - 2125214 C e calJac3.chrUn_GL286444 291 0 + 138751 C e nomLeu3.chr20 130328 122 + 85365473 I a score=16405.000000 s hg38.chr7_KI270899v1_alt 113870 49 + 190869 ggaggga----------aggaga-gaaacggagggagggaagagggcggaaaagacaggg s panTro5.chr7_NW_015973501v1_random 12351 47 - 19153 GCAG--A----------AGGAGATGAAACAGAGG-AGGGAAGAGGCGGAAAAAGACAGGG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74921 49 - 432965 ggaggga----------aggaga-gaaacggagggagggaagagggcgggaaagacaggg i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33598904 48 + 192294377 ggaggga----------ggagggaagga--gagggagggaggagggaaggagagggaggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364820 48 - 9440265 ggaggga----------ggagggaagga--gagggagggaggagggaaggagagggaagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16952972 45 - 21915920 agaggaa----------gggagaaggga-----ggagggaggagggaaggagagggaggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 89176 53 - 21531802 ggagggattg-------ggaggagaggaaggaaggagggaggagggtgggaaagacaggg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113629 60 - 2515279 ggaggaagggagagggagggggagaggaagggaggagggaggagggaaggagagggaggg i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 291 20 + 138751 --------------------------------aagggggagaggggaaagaa-------- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 479977 14 - 2125214 --------------------------------aggg------agggaaagaa-------- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2214177 10 - 8137123 ----------------------------------------TGAGGGAAAG---------- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 268575 405 + 6586416 M e canFam3.chr6 61015380 2001 - 77573801 I e rheMac8.chr3 33982318 79 + 185818997 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 130328 122 + 85365473 I a score=18643.000000 s hg38.chr7_KI270899v1_alt 113919 4 + 190869 agga s panTro5.chr7_NW_015973501v1_random 12398 4 - 19153 AGGA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74970 4 - 432965 agga i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33598952 4 + 192294377 agga i macFas5.chr3 C 0 I 4 s macNem1.NW_012019910v1 4364868 4 - 9440265 agga i macNem1.NW_012019910v1 C 0 I 4 s cerAty1.NW_012002954v1 16953017 4 - 21915920 agga i cerAty1.NW_012002954v1 C 0 I 4 s chlSab2.chr28 89229 4 - 21531802 agga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113689 4 - 2515279 agga i manLeu1.NW_012101810v1 C 0 I 4 s colAng1.NW_012117710v1 268988 4 + 6586416 agga i colAng1.NW_012117710v1 M 405 C 0 s calJac3.chrUn_GL286444 311 4 + 138751 aaga i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 479991 4 - 2125214 aaga i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2214187 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e rheMac8.chr3 33982318 79 + 185818997 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 130328 122 + 85365473 I a score=117086.000000 s hg38.chr7_KI270899v1_alt 113923 25 + 190869 gg---------------------gaaggaga-ggcaggagggaagga s panTro5.chr7_NW_015973501v1_random 12402 25 - 19153 GG----------------------AAGGAGACGGCAGGAGGGAAGGA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74974 25 - 432965 gg---------------------gaaggaga-ggcaggagggaagga i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33982397 25 + 185818997 gg---------------------gaaagaca-gggaggagggaagga i rheMac8.chr3 I 79 C 0 s macFas5.chr3 33598960 25 + 192294377 gg---------------------gaaagaca-gggaggagggaagga i macFas5.chr3 I 4 C 0 s macNem1.NW_012019910v1 4364876 46 - 9440265 aggagagggagggaggagggCGGGAAAGACA-GGGAGGAGGGAAGGA i macNem1.NW_012019910v1 I 4 C 0 s cerAty1.NW_012002954v1 16953025 25 - 21915920 gg---------------------gaaagaca-gggaggagggaagga i cerAty1.NW_012002954v1 I 4 C 0 s chlSab2.chr28 89233 25 - 21531802 gg---------------------gaaggaga-ggcaggaaggaagga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113697 25 - 2515279 gg---------------------gaAAGACA-GGGAGGAGGGAAGGA i manLeu1.NW_012101810v1 I 4 C 0 s colAng1.NW_012117710v1 268992 25 + 6586416 gg---------------------gagggaga-ggcaggagggaagga i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 315 25 + 138751 gg---------------------gaagggga-ggcaggagggaagga i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 479995 25 - 2125214 gg---------------------gaagggga-ggcaggagggaagga i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2214187 15 - 8137123 --------------------------------GGCAGGAGGGAAAGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 130328 122 + 85365473 I a score=493994.000000 s hg38.chr7_KI270899v1_alt 113948 117 + 190869 ggggggaggaaatgcaggaagg-aaggagaagg-agcagggaaggagagaggacggag-taaaagggaggagaaaagga-------gaagg-agggagg-gaaagg-ggtggaga-ggggcaggggaaggg s panTro5.chr7_NW_015973501v1_random 12427 122 - 19153 GGGGGATGGTAAAGAAGGAAGGCAAGGAGAAGGGAGTAGGGAAGGAGAGAG-ACGGAGCTAAAAGGGAGGAGAAAAGGA-------GAAGGGAGGGAGGTGAAAGGAGGTGGAGA-GGGGCAGGGCAAGGG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 74999 117 - 432965 ggggggaggaaaggaaggaagg-aaggagaagg-agtagggaaggagagaggacggag-taaaagggaggagaaaagga-------gaagg-agggagg-gaaagg-ggtggaga-ggggcaggggaaggg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33982422 113 + 185818997 gccgggag----ggaaggaaga-aaggagaagg-agtagggaaggcgagatgacggag-taaaagggaggagagaagga-------gaagg-agggagg-gaaagg-ggtagaga-gggGCAGGGGAAGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33598985 113 + 192294377 gcagggag----ggaaggaaga-aaggagaagg-agtagggaaggcgagatgacggag-taaaagggaggagagaagga-------gaagg-agggagg-gaaagg-ggtagaga-gggGCAGGGGAAGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4364922 113 - 9440265 GCAGGGAG----GGAAGGAAGA-AAGGAGAAGG-AGTAGGGAAGGCGAGATGACGGAG-TAAAAGGGAGGAGAGAAGGA-------GAAGG-AGGGAGG-GAAAGG-GGTAGAGA-GGGGCAGGGGAAGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16953050 117 - 21915920 gcagggaggaaaggaagaaaga-aaggagaagg-agtagggaaggcgagatgacggag-taaaagggaggagagaagga-------gaagg-agggagg-gaaagg-ggtagaga-gggGCAGGGGAAGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 89258 114 - 21531802 gcggggaggaaaggaagaaag----gaagaagg-agtagggaaggagagaggatggag-taaaagggaggagagaagca-------gaagg-agggagg-caaagg-ggtagaga-gggGCAGGGGAAGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113722 115 - 2515279 GCAGGGAGGAAAGGAAGGAAGA-AAGGAGAAGG-AGTAGGGAAGGCGAGATGACGGAG-TAAAAGGGAGGAGAGAAGGA-------GAAGG-AGGGAGG-GAAAGG-GGT--AGA-GGGGCAGGGGAAGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 269017 118 + 6586416 gcggggaagaaaggaaggaagg-aaggagaagg-agtagggaaagagagaggatagag-taaaagggaggagagaagga-------gaagg-agggagg-gaaagg-gatagagagggggcaggggaagga i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 340 95 + 138751 gaggggag----gaaaggaagg-aaggagaagg-ggtagggaaggagagaagagggag-taaattggagaagagaaaga--------gggg-agggagg-ggaa-------------------GGGAAGGG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 480020 120 - 2125214 gagggaag----gaaaggaagg-aaggagaagg-ggtagggaaggagagaggagggag-taaattggaagagagaaagacagaagggaggg-agggagg-gaaatg-gatggaga-ggggtgggggaaggg i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2214202 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 130328 122 + 85365473 I a score=207981.000000 s hg38.chr7_KI270899v1_alt 114065 60 + 190869 cagggaAAGG-CGGTGATAAGAAAGGGC--------------------------------------------ATGCGAACCTGATAAAGCCAGACCAGGGTGTCC s panTro5.chr7_NW_015973501v1_random 12549 103 - 19153 CAGGACAAGG-GGGT-ATAAGAAAGGGCTGCGAAACCCTGAATAAAGCCAGACGCCGCTGGGTGTCCGATGGCTGCGAACCTGATAAAGCCAGCGCAGGGTGCCC i panTro5.chr7_NW_015973501v1_random C 0 I 24 s gorGor5.CYUI01015914v1 75116 60 - 432965 cagggaAAGG-GGGTGATAAGAAAGGGC--------------------------------------------ATGCGAACCTGATAAAGCCAGACCAGGGTGTCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33982535 51 + 185818997 CAGGCAAAGG-GGGTGATAAGAAAGGGA----------------------------------------------------GTGATAAAG-CAGACCAGGGTGTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33599098 51 + 192294377 CAGGCAAAGG-GGGTGATAAGAAAGGGA----------------------------------------------------GTGATAAAG-CAGACCAGGGTGTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4365035 51 - 9440265 CAGGCAAAGG-GGGTGATAAGAAAGGGA----------------------------------------------------GTGAGAAAG-CAGACCAGGGTGTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16953167 51 - 21915920 CAGGCAAAGG-GGATGATAAGAAAGGGA----------------------------------------------------GTGATAAAG-CAGACCAGGGTGTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 89372 51 - 21531802 CAGGCAAAGG-GGGTGATAAGAAAGGGG----------------------------------------------------GTGATAAAG-CAGACCAGGGTGTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 113837 51 - 2515279 CAGGCAAAGG-GGGTGATAAGAAAGGGA----------------------------------------------------GTGATAAAG-CAGACCAGGGTGTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 269135 51 + 6586416 caggcaaagg-GGGTGATAAGAAAGGGG----------------------------------------------------GTGATAAAG-CAGACCAGGGTGTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 435 60 + 138751 CAGGGAAAGAGGGGTGATGTGAAAAGCA---------------------------------------------TGTGAACTTGATAAAGCCAGACCAGGGTGTCC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 480140 60 - 2125214 cagggaAAGGCAGGTGATATGAAATGCA---------------------------------------------TGTGAACCTGATAAAGCCAGACCAGGGTGTTC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2214202 41 - 8137123 CAGTGAAGGC-AGGT-----------AC----------------------------------------------------CTGGCGTAGCCAGACCAGGGTGTCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 130328 122 + 85365473 I a score=4627842.000000 s hg38.chr7_KI270899v1_alt 114125 760 + 190869 GATGT----GCAT-CCATTTCCT-CTGATAATA--GGCTCCTCCCCAATA-GCACAAACA-ATAAAG-AGGAAAAAC-ACGATACTATTTT--AG-GAATGGA-GGTAAG-TACGT-GAGTGGAGA-TTCCA-GCATCATTTGAAG-ATGACCAGGCAGCCCGCAGCAGTGGGGACCTCAGCGGCCCTCT--GTGAACCCAGGGTCCCAAACACGCATCGGGAGACCCAG----CAG-TGGATCCTGACAGG-TACATCACACCTGGAGTGGGAAATGCCT--CTCTCTT-CAAGAAGCCGT-GAAACCTCTTCTTTAACTTGAACTT-ATGT-CAAATCCCAAGAA-----CACTTag-----------------------accatattctccagccaaaatccacaaaaggaagaaaataatagcaattgtagaagcagaaaccctaacatcctgaataacaagtaagcaaacaaaatgcctcttgaacaattcttgggtcaagtgggacaacagagtccaaatttcagaaccaccacaaataacaattatgg-aatatgatctatcagaacccgaacaatgtgactaaaact-gtctcagagaaaaattcacagcgataacaattacgttagcaacaaccaaatacaaacaagtaaattattcattcaactgacaaaattagact-caagaaaataaaaagaacaggataaatgtaagaaccaagaagaagaaaat-aagatggtaaaagtgtgtgatttgaag-c----aggagactcaaaagcgtgctcgtgtggtgggcctttga--aattcacca-gtgaataagcct s panTro5.chr7_NW_015973501v1_random 12676 776 - 19153 GGTGTCCGTGCATGCCATTTCCT-CTGATAATA--GGCTC-TCCCCAATACACACAATCACATAAAGTAAGAAAACC-ACGATACTATTTTGCAGCGAATGGAAGGTAAGCTAAGTAGAGTGGAGA-TTCCAAGCATCATTTGAAGTATGACCAGG--GCCTGCAGCAGTGGGGACCTCAGTGGCCCTCT--GTGGAACCAGGGTCCCAAACACTCATCGGGAGACCCAG----GAGGTGGATCCTG-CAGGCTACATCACACC-GGAGTGGGAA-TGCCT--CTCTCTTGCAAGAAGCCGTTGAAACCTCTTCCTTTAACTGAACTTCATGTACAAATCCCAAGAA-----CACTTAG-----------------------ACCATATTCTCCAGCCAAAATCCACAAAAGGAAGAAAATAACAGCAATTGTAGAAGCAGAAACCCTAACATCCTGAATAACAAGTAAGCAAACAAAATGCCTCTTGAACAATTCTTGGGTCAAGTGGGACAACAGAGTCCAAATTTCAGAACCACCACAAATAACAATTATGG-AATATGATCTATCAGAACCCGAACAATGTGACTACAACA-GTCTCAGAGAAAAATTCACAGCGATAACAATTACGTTAGCAACAACCAAATACAAACAAGTAAATTATTCATTCAACTGACAAAATTAGACT-Caagaaaataaaaagaacaggataaatgtaagaaccaagaagaagaaaat-aagaTGGTAAAAGTGTGTGATTTGAAG-C----AGGAGACTCAAAAGCGTGCTCGTGTGGAGGGCCTTTGA--AATTCACCA-GTGAATGAGCCT i panTro5.chr7_NW_015973501v1_random I 24 C 0 s gorGor5.CYUI01015914v1 75176 760 - 432965 GATGA----TCAT-CCATTTCCT-CTGATAATA--GGCTCCTCCCCAACA-GCACAAACA-ATAAAG-AGGAAAAAC-ACGATACTATTTT--AG-GAATGGA-GGTAAG-TACGT-GAGTGGAGA-TTCCA-GCATCATTTGAAG-ATGACCAGGTAGCCTGCAGCAGTGGGGACCTCAGCGGCCCTCT--GTGAACCTTGGGTCCCAAACACGCATCGGGAGACCCAG----GAG-TGGATCCTGACAGG-TACATCACACCTGAAGTGGGAAATGCCT--CTCTCTT-CAAGAAGCCGT-GAAACCTCTTCTTTAACTTGAACAT-ATGT-CAAATCCCAAGAA-----CACTTAG-----------------------ACCATATTCTCCAGCCAAAATCCGCAAAAGGAAGAAAATAACAGCAATTGTAGAAGCAGAAACCCTAACATCCTGAATAACAAGTAAGCAAACAAAATGCCTCTTGAACAATTCTTGGGTCAAGTGGCACAACAGAGTCCAAATTTCAGAACCACCACAAATAACAATTATGG-AATATGATCTATCAGAACCCAAACAATGTGACTAAAACA-GTCTCAGAGAAAAATTCACAGCGATAACAATTACGTTAGTAGCAACCAAATACGAACAAGTAAATTATTCATTCAACTGACAAAATTAGACT-Caagaaaataaaaagaacaggataaatgtaagaaccaagaagaagaaaat-aagaTGGTAAAAGTGTGTGATTTGAAG-C----AGGAGACTCAAAAGCGTGCTCGTGTGGTGGGCCTTTGA--AATTCATCA-GTGAGTAAGCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 130450 761 + 85365473 GATGT----GCAT-CCACTTCCT-CTGACAATA--GGCTCCTCCCCAATA-GCAAAAACA-ATAAAG-AGGAAAAAC-ATGTTTTTATTTT--AG-GAATGGA-GGTAAG-TACGT-GAGTGGAGA-TTCCA-ACATCATTTGAAG-ATGACCAGGCAGCCTTCAGCAGTGGGGACCTCAGTGGCCCTCT--GTGAACCCAGGGTCCCAAACACGCATTGGGAGACCCAG----GAGGTGGATCCTGACAGG-CACATCACACCTGGAGTGGGAAATGCCT--CTCTCTT-CAAGGAGCCAT-GAAACCTCTTCTTTAACTTGaacat-atgt-caaatcccaggaa-----cacttag-----------------------accatattcttcagccaaaatccacaaaaggaagaaaataacagcaatcgtagaagcagaaaccctaacatactgaataacaagtaagcaaacaaaatccctgttgaacaattcttgggtcaagtgggacaacagagtccaaatttcagaatcaccacaaatagcaactgtgg-aatatgatccaccagaacccaaacgatgtgactaaaaca-gtctcagagaaaaattcacagcaataacaatcatgttagtaacaaccaaatgcaaacgagtgaattattcattcaactgacaagattagact-caagaaaataaaaagaacaggataaatgtaagaaccaagaagaaggagat-aaaatggtaaaagtgtatgatttgaag-c----aggagactcgaaactatgctcacgtcgtgggtctttga--aattcacca-gtgaataagcct i nomLeu3.chr20 I 122 C 0 s rheMac8.chr3 33982586 748 + 185818997 AATAT----GCAT-CCATTTC---CTGTTAATA--GGCTCCTCCCCAGTA-GCAGAAACA-ATAAAG-AGGAAAAACCATGATACTATTTT--AG-GAATGGA-GGTAAG-TACGT-GAGTGGAGA-TTCCA-AAATCATTTGAAA-AAGACCAGGCAGCCTGCAGCAGTGGGGACCTCAGTGGCCCTCT--GGGAACCCAGGGTCCTGAATCTGCATCGGGAGAGCCA-----GAGGTGGACCCTGACAGG-CACGTCACACCTGGAGTGGGGAACGCCG--CTCTCTC-CAAAGAACTGT-GAAATCTCTTCTTTAACTGGAACAT-ACGT-CAAATCCCAAGAA-----CACTTAG-----------------------ACCATATTCTTCAGCCCAAATCCACAAAAGGAAGAAAATAACAGTAATCATAGAAGCAA--ACACTAACATTCCAAAAAACAAATCAGCAAACAAAATCCCTCTTGAACAATTCTTGGGTAAAGTGGGACAACAGAGTCCAAATTTCAGAATCATCACAAAGAGCAATTACGG-AATAGGATCTATCAGAACCCAAATGATGTGACTAAAACC-GTCCCAGAGAAAAATTCACAGTGATAGCAATTATACCAGTCACAACTAAATACAAACAAGTAAATTATTCATTCAACTCACAA-ATTAGACT-CAAGAAAATAAAAAGAACAGGATAAATGTAAGGACCAAGAAGAAGACAAT-AAAATGGGAAAAGTGTATGATTTGAAA-C----AGTAGAATCAAAAGCGTG--------GTGGGTCTTTGA--AATTCTTCA-GTGAATAAGCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33599149 748 + 192294377 AATAT----GCAT-CCATTTC---CTGTTAATA--GGCTCCTCCCCAGTA-GCAGAAACA-ATAAAG-AGGAAAAACCATGATACTATTTT--AG-GAATGGA-GGTAAG-TACGT-GAGTGGAGA-TTCCA-AAATCATTTGAAA-AAGACCAGGCAGCCTGCAGCAGTGGGGACCTCAGTGGCCCTCT--GGGAACCCAGGGTCCTGAATCTGCATCGGGAGAGCCA-----GAGGTGGACCCTGACAGG-CACGTCACACCTGGAGTGGGGAACGCCG--CTCTCTC-CAAAGAACTGT-GAAATCTCTTCTTTAACTGGAACAT-ACGT-CAAATCCCAAGAA-----CACTTAG-----------------------ACCATATTCTTCAGCCCAAATccacaaaaggaagaaaataacagtaattgtagaagcaa--acactaacattccaaaaaacaagtcagcaaacaaaatccctcttgaacaattcttgggtaaagtgggacaacagagtccaaatttcagaatcatcacaaagagcaattacgg-aataggatctatcagaacccaaatgatgtgactaaaacc-gtcccagagaaaaattcacagtgatagcaattataccagtcacaactaaatacaaacaagtaaattattcattcaactcacaa-attagact-caagaaaataaaaagaacaggataaatgtaaggaccaagaagaagacaat-aaaatgggaaaagtgtatgatttgaaa-c----agtagaatcaaaagcgtg--------gtgggtctttga--aattcttca-gtgaataagcct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4365086 748 - 9440265 AATAT----GCAT-CCATTTC---CTGTTAATA--GGCTCCTCCCCAGTA-GCAGAAACA-ATAAAG-AGGAAAAACCATGATACTATTTT--AG-GAATGGA-GGTAAG-TACGT-GAGTGGAGA-TTCCA-AAATCATTTGAAA-AAGACCAGGCAGCCTGCAGCAGTGGGGACCTCAGTGGCCCTCT--GGGAACCCAGGGTCCTGAATCTGCATCGGGAGAGCCA-----GAGGTGGACCCTGACAGG-CACGTCACACCTGGAGTGGGGAACGCCG--CTCTCTC-CAAAGAACTGT-GAAATCTCTTCTTTAACTGGAACAT-ACGT-CAAATCCCAAGAA-----CACTTAG-----------------------ACCATATTCTTCAGCCCAAATCCACAAAAGGAAGAAAATAACAGTAATCGTAGAAGCAA--ACACTAACATTCCAAAAAACAAGTCAGCAAACAAAATCCCTCTTGAACAATTCTTGGGTAAAGTGGGACAACAGAGTCCAAATTTCAGAATCATCACAAAGAGCAATTACGG-AATAGGATCTATCAGAACCCAAATGATGTGACTAAAACC-GTCCCAGAGAAAAATTCACAGTGATAGCAATTATACCAGTCACAACTAAATACAAACAAGTAAATTATTCATTCAACTCACAA-ATTAGACT-CAAGAAAATAAAAAGAACAGGATAAATGTAAGGACCAAGAAGAAGACAAT-AAAATGGGAAAAGTGTATGATTTGAAA-C----AGTAGAATCAAAAGCGTG--------GTGGGTCTTTGA--AATTCTTCA-GTGAATAAGCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16953218 748 - 21915920 AATAT----GCAT-CCATTTC---CTGTTAATA--GGCTCCTCCCCAGTA-GCAGAAACA-ATAAAG-AGGAAAAACCATGATACTATTTT--AG-GAATGGA-GGTAAG-TATGT-GAGTAGAGA-TTCCA-AAATCATTTGAAA-AAGACCAGGCAGCCTGCAGCAGTGGGGACCTCAGTGGCCCTCT--GGGAACCCAGGGTCCTGAATCTGCATTGGGAGAGCCA-----GAGGTGGACCCTGACAGG-CACGTCACACCTGGAGTGGGGAACGCCG--CTCTCTC-CAAAGAACTGT-GAAATCTCTTCTTTAACTGGAACAT-ACGT-CAAATCCCAAGAA-----CACTTAG-----------------------ACCATATTCTTCAGCCCAAATCCACAAAAGGAAGAAAATAACAGTAATCGTAGAAGCAA--ACACTAACATTCCGAAAAACAAGTCAGCAAACAAAATCCCTCTTGAACAATTCTTGGGTAAACTGGAACAACAGAGTCCAAATTTCAGAATCATCACAAAGAGCAATTACGG-AATAGGATCTATCAGAACCCAAATGATGTGACTAAAACC-GTCCCAGAGAAAAATTCACAGTGATAGCAATTATGCCAGTCACAACTAAATACAAACAAGTAAATTATTCATTCAACTCACAA-ATTAGACT-CAAGAAAATAAAAAGAACAGGATAAATGTAAGGACCAAGAAGAAGACAAT-AAAATGGGAAAAGTGTATGATTTGAAA-C----AGTAGAATCAAAAGCGTG--------GTGGGTCTTTGA--AATTCTTCA-GTGAATAAGCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 89423 748 - 21531802 AATAT----GCAT-CCATTTCCT-CTGTTAACA--GGCTCCTCCCCAGTA-GCAGAAACA-ATTAAA-AGGAAAAACCATGATACTATTTT--AG-GAATGGA-GGTAAG-TACGT-GAGTGGAGA-TTCCA-AAATCATTTGAAA-AAGACCAGGCAGCCTGCAGCAGTGGGGACCTCAGTGGCCCTCT--GGGAACCCAGGGTCCCGAACCTGCATCGGGAGAGCCAG----GAGGTGGACCCTGACAGG-CACGTCACACCTGGAGTGGGGAGCGCCGCTCTCTCTC-CAAAGAACTGT-GAAA-----TCTTTAACTGGAACAT-ACGT-CAAATCCCAAGAC-----CACTTAG-----------------------ACCATATTCTTCAGCCCAAATCCACAAAAGGAAGAACATAACAGTAATCGTAGAAGCAG--ACACTAACATTCCGAAAAACAAGTCAGCAAACAAAATCCCTCTTGAACAATTCTTGGGTAAAGTGGGACACCAGAGTCCAAATTTCAGAATCATCACAAAGAGCAATTACGG-AATAGGATCTATCAGCACCCAAATGATGTGACTAAAACC-GTCCCAGAGAAAAATTCACAGCGATAGCAATTATGCCAGTCACAACCAGATACAAACAAGTAAATTGTTCATTCAACTCACAA-ATCAGACT-CAGGAAAATAAAAAGAACAGGATACATGTAAGGACTAAGGAGAAGAAAAT-AAAATGGGAAAAGTGTATGATTTGAAA-C----AGTAGAATCAAAAGCATG--------GTGGGTCTTTGA--AATTCTTCA-GTGAATAAGCCT i chlSab2.chr28 C 0 I 435 s manLeu1.NW_012101810v1 113888 748 - 2515279 AATAT----GCAT-CCATTTC---CTGTTAATA--GGCTCCTCCCCAGTA-GCAGAAACA-ATAAAG-AGGAAAAACCATGATACTATTTT--AG-GAATGGA-GGTAAG-TACGT-GAGTGGAGA-TTCCA-AAATCATTTGAAA-AAGACCAGGCAGCCTGCAGCAGTGGGGACCTCAGTGGCCCTCT--GGGAACCCAGGGTCCTGAATCTGCATCGGGAGAGCCA-----GAGGTGGACCCTGACAGG-CACGTCACACCTGGAGTGGGGAACGCCG--CTCTCTC-CAAAGAACTGT-GAAATCTCTTCTTTAACTGGAACAT-ACGT-CAAATCCCAAGAA-----CACTTAG-----------------------ACCATATTCTTCAGCCCAAATCCACAAAAGGAAGAAAATAACAGTAATCGTAGAAGCAA--ACACTAACATTCCGAAAAACAAGTCAGCAAACAAAATCCCTCTTGAACAATTCTTGGGTAAAGTGGGACAACAGAGTCCAAATTTCAGAATCATCACAAAGAGCAATTACGG-AATAGGATCTATCAGAACCCAAATGATGTGACTAAAACC-GTCCCAGAGAAAAATTCACAGTGATAGCAATTATGCCAGTCACAACTAAATACAAACAAGTAAATTATTCATTCAACTCACAA-ATTAGACT-CAAGAAAATAAAAAGAACAGGATAAATGTAAGGACCAAGAAGAAGACAAT-AAAATGGGAAAAGTGTATGATTTGAAA-C----AGTAGAATCAAAAGCGTG--------GTGGGTCTTTGA--AATTCTTCA-GTGAATAAGCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 269186 749 + 6586416 AATAT----GCAA-CCATTTC---CTGTTAATA--GGCTCCTCCCCAATA-GCAGAAACA-ATAAAT-AGGAAAAACAATGATACTGTTTT--AG-GATCGGA-GGTAAG-TAGGT-GAGTGGAGA-TTCCA-AAATCATTTGAAA-AAGACCAGGCAGCCTGCAGCAGTGGGGACCTCAGTGGCCCTCT--GTGAACCCGGGGTCCTGAACCTGCGTCGGGAGAGCCAG----GAGGTGGACCCCAACAGG-CACGTCACACCTGGAGTGGGGAACGCCG----CTCTC-CAAAGAACCGT-GAAATCTCTTCTTTAACTGGAACAT-ACGT-CAAATCCCAAGAA-----CACTCAG-----------------------ACCATATTCTTCAGCCCAAATCCACCAAAGGAAGAAAATAACAGTAATCGTAGAAGCAGACACACTAACATTCTGAAAAACAAGTCAGCAAACAAAATCCCTCTTGAACAATTCTTGGGTAAAGTGGGACAACAGCATCCAAATTTCAGAATCACCACAAAGAGCAATTACAG-GATAGGATCTATCGGAACCCAAATGATGTGACTAAAATT-GTCCCAGAGAAAAATTCACAGCACTAGCAATTATGCCAGTCACAACCAGATACAAACAAGTAAATTATTCATTCAGCTCACAA-ATCAGACT-Caagaaaataaaaagaacaggataaatgtaaggaccaagaagaagaaaat-agaatgggaaaaGTGTATGATTTGAAA-C----AGTAGAATCAAAACCATG--------GTGGGTCTTTGA--AATTCATCA-GTGAATAAGCCT i colAng1.NW_012117710v1 C 0 I 159 s calJac3.chrUn_GL286444 495 752 + 138751 ACCGT----GCAT-CCATTTCCT-CTGATAATA--GGCTCCTCCCTGATA-GCAAAAACA-ATAAAG-AGGAAAAACAATGATACTATTTT--AG-GAATGGA-GGTAAG-TAAGC-GAATGGAGA-TTCCA-AAATCATTTGAAA-ATGACCAGGCAGCCTGCAGCAGTGGGGGCTTCAGCGGCCCTCT--GTGAACTCAGGGTCCTGTATCTGTGTCAGGAGACCCAG----GGGGT----CCTGACAGC-CACATCACACCCAGAGTGGGAAACGCCT--CTCTCTT-CAAGGATCCAT-GACACCTCTTCTTTAAATTGAACAT-ATGT-CAAATCCCAAGAA-----CACTTAG-----------------------ACCATATTCCTCAGCCAAAATCAacagcaggaagaaaataacagcaatcatagaagcggaaaacctaacatcctgaaaaacagctaagcaaacaaaatccctcctgaacaatttttgggtaaaacagagcaac--agcctaaatgtcagaatcacagaaaacagcaattatgg-aatatgatctttcagaactcaaatgatatgactaaaaca-gtctcagaggaaaattcatagcggtaacaattatgttagtaacaaccaaatataaacaagtaaattattcattcaacttacaaaattagact-ccagaaaataaaaagaacaggataaatgtgagaaccaagaagaaaaaaatgaaaatggtaaaagtgtatgatttgaaacc----aggagaataaaa------ttcacgtgctgggcctttga--aattcatca-gtgaataagcct i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 480200 760 - 2125214 ACTGT----GCAT-CCATTTCCT-CTGATAACA--GGCTCCTCCCTGATA-ACAAAAGCA-ATAAAG-AGGAAAAATAATGATACTATTTT--AG-GAATGGA-GGTAAG-TAAGT-GAATGGAGA-TTCCA-AAATCATTTGAAA-ATGACCAGGCGGCCTGCAGCGGTGGGGGCTTCAGCGGCCCTCT--GTGAACCCAGGGTCCTGTATCTGTGTCAAGAGACCCAG----GGGGT----CCTGACAAC-CACATCACACCTGGAGTGGGAAACGCCT--CTCTCTT-CAAGGAGCCAT-GAAACCTCTTCTTTAAATTGAACAT-ATGT-CAAATCCCAAGAA-----CACTTAG-----------------------ACCATATTCCTCAGCCAAAATCAACAGCAGGAAGAAAATAACAGCAATCGTAGAAGCGGAAAACCTAACATCCTGAAAAACAGGTAAGCAAACAAAATCCCTCCTGAACAATTTTTGAGTCAAATAGAGCAACAGAGTCTAAATTTCAGAATCATGGAAAACAGCAATTATGG-AATATGATCTTTCGGAACTCAAATGATATGACTAAAACA-GTCTCAGAGGAAAATTCACAGCGATAACAATTACATTAGTAACAACCAAATATAAACAAATAAATTATTCATTCGACTTACAAAATTAGACT-CCAgaaaataaaaagaacaggataaatgtgagaaccaagaagaagaaaatgaaaatgGTAAAAGTGTATGATTTGAAACC----AGGAGAATAAAAAGCGTGTTCAAGTGCTGGGCCTTTGA--AATTCATCA-GTGAATAAGCCT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2214243 750 - 8137123 TGTAT----GTAC-CCAGCTCCTCCTGGGAACAGCGGCTCCTCCCCAACA-GCAAAAACA---AAAA-AAGAAAAGCAATGACAATATTGT--AG-GAATGGA-GGAAGG-GAGGT-GAGCAGGGACCTTCG-AAATTATTTTAAA-ATAACTGGAGAGCCCAGAGC---------------TGCCCTCCAAGGGAGCCCAGGAC-----------------AGAGCCAGACCCGCTACAAATCCTTGTGGC--------CACCTTGGATGGGCACTGCCC--Ctctttt-ccaggaaccgt-gaaacctaattgttaaattgaacat-atgt-caaatcacaggaaaacctcactcaactccaaaatgaggaaatccatgtatcatactcttgaggcaaaatcaacaaataaaaaaaaaaaaaagcagatatggaagcagaaaatctaacatgctaaaaagcaaacaatta---aaaatacctcttgaacagttctaggatcaaataagacagcagagtcca------aggaacac--aaaatagcaatgatagaaatatgatctatcagaacctgaacgatatgactaaaacagggcttggaagagaattcatagtggcaagaattgcattagtaacaatcaaacacaa-----caaattacccattcacccaaagaaattagattaaaaaaaaataaaaagaacaggataaatgtaagaac---gaggaacaaatg-gcaacagtaaaagcataggcttcaaaa-ctaaaagaagaaatataaccacatccaagtggtggtttcttgagcaagtgaccacgtgaataggcct i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C a score=13736.000000 s hg38.chr7_KI270899v1_alt 114885 6 + 190869 gtgtct s panTro5.chr7_NW_015973501v1_random 13452 6 - 19153 GTGTCT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 75936 6 - 432965 GTGTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131211 6 + 85365473 gtgtct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983334 2 + 185818997 ----CT i rheMac8.chr3 C 0 I 88 s macFas5.chr3 33599897 2 + 192294377 ----ct i macFas5.chr3 C 0 I 10 s macNem1.NW_012019910v1 4365834 2 - 9440265 ----CT i macNem1.NW_012019910v1 C 0 I 88 s cerAty1.NW_012002954v1 16953966 2 - 21915920 ----CT i cerAty1.NW_012002954v1 C 0 I 88 s manLeu1.NW_012101810v1 114636 2 - 2515279 ----CT i manLeu1.NW_012101810v1 C 0 I 88 s calJac3.chrUn_GL286444 1247 6 + 138751 gtgtct i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 480960 6 - 2125214 GTGTCT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2214993 6 - 8137123 ctgtcc i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 269935 159 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 90171 435 - 21531802 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C a score=43272.000000 s hg38.chr7_KI270899v1_alt 114891 31 + 190869 accctaattcaggaactgtgaggacggcatg s panTro5.chr7_NW_015973501v1_random 13458 31 - 19153 ACCCTAATTCAGGAACTACGGGGACGGCACG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 75942 31 - 432965 ACCCTAATTCAGGAACTATGGGGACGGCACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131217 31 + 85365473 accctaaatcaggaaatgtggggacggcact i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33599909 31 + 192294377 actctaattcaggaaacacagggatggcacg i macFas5.chr3 I 10 I 47 s calJac3.chrUn_GL286444 1253 31 + 138751 accccaaatcaggaactatggggagggcact i calJac3.chrUn_GL286444 C 0 I 1 s cebCap1.NW_016107703v1 480966 31 - 2125214 ACCCCAAATCAGGAACTATGGGGAGGGCACT i cebCap1.NW_016107703v1 C 0 I 1 s otoGar3.GL873611 2214999 16 - 8137123 accccagtt-aggaaat-------------- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 269935 159 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 90171 435 - 21531802 I e manLeu1.NW_012101810v1 114638 88 - 2515279 I e cerAty1.NW_012002954v1 16953968 88 - 21915920 I e macNem1.NW_012019910v1 4365836 88 - 9440265 I e rheMac8.chr3 33983336 88 + 185818997 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C a score=4500.000000 s hg38.chr7_KI270899v1_alt 114922 1 + 190869 g s panTro5.chr7_NW_015973501v1_random 13489 1 - 19153 G i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 75973 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131248 1 + 85365473 g i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983424 1 + 185818997 G i rheMac8.chr3 I 88 C 0 s macFas5.chr3 33599987 1 + 192294377 g i macFas5.chr3 I 47 C 0 s macNem1.NW_012019910v1 4365924 1 - 9440265 G i macNem1.NW_012019910v1 I 88 C 0 s cerAty1.NW_012002954v1 16954056 1 - 21915920 g i cerAty1.NW_012002954v1 I 88 C 0 s chlSab2.chr28 90606 1 - 21531802 G i chlSab2.chr28 I 435 C 0 s manLeu1.NW_012101810v1 114726 1 - 2515279 g i manLeu1.NW_012101810v1 I 88 C 0 e colAng1.NW_012117710v1 269935 159 + 6586416 I e otoGar3.GL873611 2215015 0 - 8137123 C e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 480997 1 - 2125214 I e calJac3.chrUn_GL286444 1284 1 + 138751 I a score=1762768.000000 s hg38.chr7_KI270899v1_alt 114923 291 + 190869 acacacacgtgcacacgagtctaacgacatgggaaacagttacgac--agaagcaca-----cacaagtgcataatttacagattccatgcaaatactttaaattctaaataatatgggtgattatcccaggcaaatatgaattgccccaactaaccaaaaggaaacagaaaagtaagcagactattattaaccgcagaagaaattgagaaatctattaaaaccc-agcccactcacctccgaaattctacgcccagataaatcacaaattcactaattcaaaatgctggtgcaccaat s panTro5.chr7_NW_015973501v1_random 13490 291 - 19153 ACACACACATGCACATGAGTCTAACAACGTGGGAAGCAGTTACGAC--AGAAGCACA-----CACAAGTGCATAATTTACAGATTCCATGCAAATACTTTAAATTCTAAATAATATGGGTGATTATCCCAGGCACATATGAATTGCCCCAACTCACCAAAAGGAAACAGAAAAGTAAGCAGACTATTATTAACTGCAGAAGAAATTGAGAAATCTATTAAAACCC-AGCCCACTCACCTCCGAAATTCTACGCCCAGATAAATCACAAATTCACTAATTCAAAATGCTGGTGCACCAAT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 75974 291 - 432965 ATACACGCATGCACACGAGTCTAACAACATGGGAAACAGTTACGAC--AGAAGCGCA-----TACAAGCGCATAATTTACAAATTCCATGCAAATACTTTAAATTCTAAATAATATGGGTGATTATCCCAGGCAAATATGAATTGCCCCAACTCACCAAAAGGAAACAGAAAAGTAAGCAGACTATTATTAACTGCAGAAGAAATTGAGAAATCTATTAAAACCC-AGCCCACTCACCTCCGAAATTCTACGCCCAGATAAATCACAAATTCACTAATTCAAAAAGCTGGTGCACCAAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131249 290 + 85365473 acacacacat-cacacgagtttaacaacatggcaaacagttacgac--agaagcaca-----tgcaagcgcataatttacaaattccatgcaaatactttaaattctaaataatatgggtgattatcctaggcaaatatgaattgccccaactgactaaaacgagacagaaatttaagcagaatattattaactgcagaagaaattgagaaatctatcaaaactc-agcccactcacatccgaaattccaggcccagataaatcacaaattcactaattcaaaatgctggtgcaccaat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983425 287 + 185818997 ACACACACATGCTCACAAGTTTAACAACAAGGGAAACAGTTACAATGGAGAAGCACA-----CACAAGCGC-CAGCTTACAAATTCCATGCAAATACTTTAAATTCTAACTAATATGGGTGATTATCCCAGGCAA-----AATTGCCCCAACTGACCAAAAAGGGACAGAAATTTAAGCAGAATATTATTAACTGCAGAAGAAATTGAGATATCTATCAAAAACC-AGTGCACCCACCTCCAAATTTCCAGGCTCAGAAAAATCACAAATTCACTACTTCAACATGTTGGTGCACCAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33599988 287 + 192294377 acacacacatgctcacaagtttaacaacaagggaaacagttacaatggagaagcaca-----cacaagcgc-cagcttacaaattccatgcaaatactttaaattctaactaatatgggtgattatcccaggcaa-----aattgccccaactgaccaaaaagggacagaaatttaagcagaatattattaactgcagaagaaattgagatatctatcaaaaacc-agcgcacccacctccaaatttccaggctcagaaaaatcacaaattcactacttcaacatgttggtgcaccagt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4365925 287 - 9440265 ACACACACATGCTCACAAGTTTAACAACAAGGGAAACAGTTACAATGGAGAAGCACA-----CACAAGCGC-CAGCTTACAAATTCCATGCAAATACTTTAAATTCTAACTAATATGGGTGATTATCCCAGGCAA-----AATTGCCCCAACTGACCAAAAAGGGACAGAAATTTAAGCAGAATATTATTAACTGCAGAAGAAATTGAGATATCTATCAAAAACC-AGCGCACCCACCTCCAAATTTCCAGGCTCAGAAAAATCACAAATTCACTACTTCAACATGTTGGTGCACCAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16954057 284 - 21915920 acacacacatgctcacaAGTTT---AACAAGGGAAACAGTTACAATGGAGAAGCACA-----CACAAGCGC-CAGCTTACAAATTCCATGCAAATACTTTAAATTCTAACTAATATGGGTGATTATCCCAGGCAA-----AATTGCCCCAACTGACCAAAAGGGGACAGAAATTTAAGCAGAATATTATTAACTGCAGAAGAAATTGAGAAATCTATCAAAAACC-AGCGCACCCATCTCCAAATTTCCAGGCCCAGAAAAATCACAAATTCACTACTTCAACATGTTGGTGCACCAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 90607 283 - 21531802 ACACACACATGCTCACAAGTTTAACAACAAGGGAAACAGTTACAACAGAGACGCACA-----CACAAGCGC-TAACTTACAaactccatgcaaatactttaaatt----ctaatacaagtgattatcccaggcaa-----aattgccccaactgaccaaaaggagacagaaatttaagcagaatattattaactgcagaagaaattgagaaatctatcaaaaacc-agcccacccacctctgaatttccaggcccagataaatcacaaattcactacttcaacatgttggtgcaccagt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 114727 287 - 2515279 acacacacatgctcacaAGTTTAACAACAAGGGAAACAGTTACAATGGAGAAGCACA-----CACAAGCGC-CAGCTTACAAATTCCATGCGAATACTTTAAATTCTAACTAATATGGGTGATTATCCCAGGCAA-----AATTGCCCCAACTGACCAAAAGGGGACAGAAATTTAAGCAGAATATTATTAACTGCAGAAGAAATTGAGAAATCTATCAAAAACC-AGCGCACCCATCTCCAAATTTCCAGGCCCAGAAAAATCACAAATTCACTACTTCAACATGTTGGTGCACCAGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270094 287 + 6586416 ACACACACATGCTCACAAGTTTAACAACAAGGGAGACAGTTACAACAGAGAAGCACC-----CACAAGCGC-TAACTTACAAACTCCATGCAAATACTTTAAATTCTAACTAATATGGGTGATGATCCCAGGCAA-----AATTGCCCCAACTGACCAAAAGGAGACAGAAATTTAAGCAGAATATTATTAACTGCAGAAGAAATTGAGAAATCTATCAAAAACC-AGCCCACCCACCTCCGAATTTCCAGGCCCAGAAAAATCACAAATTCACTACCTCAACAGGTTGGTGCACCAGT i colAng1.NW_012117710v1 I 159 C 0 s calJac3.chrUn_GL286444 1285 288 + 138751 aaacttacatgtacacaagtttaacaccatgg-aaacactgacaacacaggagcagg-----tgcaagagcatcatttacaaatttcatgcaaatactttgagttctaaatcatatgggcgattaccccaggaaaacgtgaattgccccaactgactaaaaggagacagaaatgtaagcagaa---tattaactgcagaagaaattgagaaatctattaaaaaCCAAGCCCACCCACCTCTGAAATTCCA-GCTCGGATAAATCACAAATTCACTAATTCACAATCTCAGTGCACCAA- i calJac3.chrUn_GL286444 I 1 C 0 s cebCap1.NW_016107703v1 480998 288 - 2125214 ACACATACATGTACACAAGTTTAACACCGTGG-AAACACTGACAGCACAGGAGCACG-----TGCAAGAGCATCATTTACAAATTCCATGCAAATACTTTGAGTTCTAAATCGTATGGGCGATTACCCCAGGGAAACATGAATTGCCCCAACTGACTAAAAGGAGACAGAAATGTAAGCAGAA---TATTAACTGCGGAAGAAATTGAGAAATCTATTAAAAACC-AGCCCACCCACCTCTGAAATTCCA-GCTCGGATAAATCACAAGTTCACTAATTCACAATGTCAGTGCACCAAT i cebCap1.NW_016107703v1 I 1 I 371 s otoGar3.GL873611 2215015 291 - 8137123 -ctcacacacagacacaagttaacagacgtggcagataattacaacatagaagcaacttcattataagaaactgttttccaaattctatgtaaatactttaaatgctaaataatatagacagttactccatggaaatgtaaatcacccaaacttaccaaaatgagatagaaatttaagcagaa---tattaactccagaagaatttgaaaaatctattaaaaaat-accccacatacctcccaaatgccaggcccaaataaatcacaaactcactaatgcgaaa---tagtatattaat i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C a score=170648.000000 s hg38.chr7_KI270899v1_alt 115214 32 + 190869 ctttacaatatgattaaaatttcctattcatg s panTro5.chr7_NW_015973501v1_random 13781 32 - 19153 CTTTACAATATGATTAAAATTTCCTATTCATG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76265 32 - 432965 CTTTACAATATGATTAAAATTTCCTATTCATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131539 32 + 85365473 ctttatgatatgattaaaatttcctattcata i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983712 32 + 185818997 CTTCACAATGTGACTAACATTTCCTATTCGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600275 32 + 192294377 cttcacaatgtgactaacatttcctattcgtg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4366212 32 - 9440265 CTTCACAATGTGACTAACATTTCCTATTCGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16954341 32 - 21915920 CTTCACAATGTGACTAACATTTCCTATTCGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 90890 32 - 21531802 cttcacaatgtgactaacatttcctattcatg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 115014 32 - 2515279 CTTCATAATGTGACTAACATTTCCTATTCATG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270381 32 + 6586416 CTTCACAATACGACTCACATTTCCTGTTTGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 1573 29 + 138751 ---TAGAGTATGATTAAAATTCCCTATTTATg i calJac3.chrUn_GL286444 C 0 I 1069 s otoGar3.GL873611 2215306 32 - 8137123 cttttcgatatgtttaaaatttcctatttctg i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 481286 371 - 2125214 I a score=174024.000000 s hg38.chr7_KI270899v1_alt 115246 35 + 190869 agcataaagaaagaaaaccctgtgttcttcttagg- s panTro5.chr7_NW_015973501v1_random 13813 35 - 19153 AGCATAAAGAAAGAAAACCTTGTGTTCTTCTTAGG- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76297 35 - 432965 AGCATAAAGAAAGAAAACCCTGTGTTCTTCTTAGG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131571 35 + 85365473 agcataaagaaagaaaaccctgcattcttttcagg- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983744 35 + 185818997 AGCATAAAGAAAGAGAACCCTGCATTCTTTTTAGG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600307 35 + 192294377 agcataaagaaagagaaccctgcattctttttagg- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4366244 35 - 9440265 AGCATAAAGAAAGAGAACCCTGCATTCTTTTTAGG- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16954373 35 - 21915920 AGCATAAAGAAAGAGAACCCTGCATTCTTTTTAGG- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 90922 35 - 21531802 agcataaagaaagagaaccctgcattctttttagg- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 115046 35 - 2515279 AGCATAAAGAAAGAGAATTCTGTATTCTTTTTAGG- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270413 35 + 6586416 AGCATAAAGAAAGAGAACTCTGCATTCTTTTTAGG- i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2215338 36 - 8137123 aggataacgaaggaaaaccccaaattcttttttata i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 73920 6203 + 376347 M e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 481286 371 - 2125214 I e calJac3.chrUn_GL286444 1602 1069 + 138751 I a score=627286.000000 s hg38.chr7_KI270899v1_alt 115281 104 + 190869 attccagcataatatttgcaccaaaacattgaaaagttgcacatacacatgaaatgaaacatac------cagctaTGGTAATAACGTCCTCACACATTACTTCATGTGG s panTro5.chr7_NW_015973501v1_random 13848 104 - 19153 ATTCCAGCATAATATTTGCACCAAAACATTGAAAAGTTGCACATACACATGAAATGAAACATAC------CAGCTACGGTAATAACGTCCTCACACATTACTTCATGTGG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76332 104 - 432965 ATTCCAGCAAAATATTTGCACCAAAACATTGAAAAGTTGCACATACACATGAAATGAAACATAC------CAGCTACGGTAATAACGTCCTCACACATTACTTCATGTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131606 104 + 85365473 attccagcataatatttgtaccaaaacattgaaaagttgcacatacacatgaaatgaaacatac------cagctaCAGTAATAACGTCCTCACACGTTACGTCATGTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983779 102 + 185818997 ATTCCAGCATAGTATTTTTACTAAAACATTGAAAAGTCACACACACAC--GACATGAGGCACAC------GGGATACTGTGATGAAGTCCTCACACGTTACTTCACGTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600342 102 + 192294377 attccagcatagtatttttactaaaacattgaaaagTCACACACACAC--GACATGAGACACAC------GGGATACTGTGATGAAGTCCTCACACGTTACTTCACGTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4366279 102 - 9440265 ATTCCAGCATAGTATTTTTACTAAAACATTGAAAAGTCACACACACAC--GACATGAGACACAC------GGGATACTGTGATGAAGTCCTCACACGTTACTTCACGTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16954408 104 - 21915920 ATTCCAGCATAGTATTTTTACCAAAACATTGAAAAGTCACACACACACATGACATGAGACACAC------GGGATACTGTGATGAAGTCCTCACACGTTACTTCACGTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 90957 102 - 21531802 attccggcatagtatttttaccaaaacattgaaaagTCACACACACAC--GACATGAGACGCAC------GGGATACTGTGATGAAGTCCTCACACGTTACTTCACGTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 115081 104 - 2515279 ATTCCAGCATAGTATTTTTACCAAAACATTGAAAAGTCACACACACACATGACATGAGACACAC------GGGATACTGTGATGAAGTCCTCACACGTTACTTCACGTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270448 104 + 6586416 ATTCCAGCATAGTACTTTTACCAAAACATTGAAAAGTCACAGACACACATGACATGAGACACCC------GGGATACTGTGATGAAGTCCTCACACGTTACTTCATGCGG i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 481657 102 - 2125214 ATTCCAGTATAATATTTGTACCAAAACATTGAAAAGTTACATACACAT--GAAATGAAACATAC------CAGATACTGTGATAAAGTCCTCACACATTACTTCATATGG i cebCap1.NW_016107703v1 I 371 I 18 s aotNan1.NW_018514293v1 80233 102 + 376347 ATTCCAGCATAATATTTGTACTAAAACATTGAAAAGTTACATACACAT--GAAATGAAACATAC------CAGATACTATAATAAAGTCCTCACACGTTACTTTATGTGG i aotNan1.NW_018514293v1 M 6203 I 19 s otoGar3.GL873611 2215374 106 - 8137123 attccaggataatagttctatcaaaatgttgacaagTTATATACATGC--AAAATGAAACATTTTAATGAAAGACATTATAAT--AGTTATTACTTATCATTTTATGTCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C e calJac3.chrUn_GL286444 1602 1069 + 138751 I a score=46531.000000 s hg38.chr7_KI270899v1_alt 115385 20 + 190869 CAGATT-AAAG--ACTCACACGT--- s panTro5.chr7_NW_015973501v1_random 13952 20 - 19153 CAGATT-AAAG--ACTCACACGT--- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76436 20 - 432965 CAGATT-AAAG--ACTCACACGT--- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131710 20 + 85365473 CAGATT-AAAG--ATGCACACGT--- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983881 19 + 185818997 CGGATT-GAAG--GCACAAGCA---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600444 19 + 192294377 CGGATT-GAAG--GCACAAGCA---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4366381 19 - 9440265 CGGATT-GAAG--GCACAAGCA---- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16954512 19 - 21915920 CGGATT-GAAG--GCACAAGCG---- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 91059 19 - 21531802 CAGATT-GAAG--ACACAAGCA---- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 115185 19 - 2515279 CGGATT-GAAG--GCACAAGCA---- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270552 21 + 6586416 CAGATT-GAAGACACACAAGCA---- i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2215480 23 - 8137123 TACATTAAAAG--ACATACATA-CTT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e aotNan1.NW_018514293v1 80335 19 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 481759 18 - 2125214 I e calJac3.chrUn_GL286444 1602 1069 + 138751 I a score=364216.000000 s hg38.chr7_KI270899v1_alt 115405 59 + 190869 GTAACGACCACCTCTCGGCTTCAGTTGAGG-TTTCCAAGCACTTTAAAACAAGTTCAGTA s panTro5.chr7_NW_015973501v1_random 13972 59 - 19153 GTAACGACCACCTCTCGGCTTCAGTTGAGG-TTTCCAAGCACTTTAAAACAAGCTCAATA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76456 59 - 432965 GTAACAACCACCTCTTGGCTTCAGTTGAGG-TTTCCAAGCACTTTAAAACAAGTTCAATA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131730 60 + 85365473 GTAATGACCACCTATCGGCTTCCGTCGAGGTTTTCCAAGCACTTTAAAACAAGTTCAATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983900 60 + 185818997 GTAACGGCCACCTCTCTGCTTCGGCTGAGGTTTTCCAAACACCTTAAAACAAATTCAGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600463 60 + 192294377 GTAACGGCCACCTCTCTGCTTCGGCTGAGGTTTTCCAAACACCTTAAAACAAATTCAGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4366400 60 - 9440265 GTAACGGCCACCTCTCTGCTTCGGCTGAGGTTTTCCAAACACCTTAAAACAAATTCAGTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16954531 60 - 21915920 GTAACGGCCACCTCTCTGCTTCGGCTGAGGTTTTCCAAGCACCTTAAAACAAATTCAGTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 91078 55 - 21531802 GTAACGGCCACCTCTCTGCTTCAGCTGAGGTTTTCCAAG-----TAAAACAAATTCAGTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 115204 60 - 2515279 GTAACGGCCACCTCTCTGCTTCGGCTGAGGTTTTCCAAGCACCTTAAAACAAATTCAGTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270573 60 + 6586416 GTAACGGCCAGCTCTCCGCTTCAGCTGAGGTTTCCCAAGCGCTTTAAAACAAATTCCATA i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 481777 60 - 2125214 GTAACGACCACTTCTCTGCCTCAATTGAGGTTTTCCAAGAACCTTAAAACAAGTTCAATA i cebCap1.NW_016107703v1 I 18 C 0 s aotNan1.NW_018514293v1 80354 60 + 376347 GTAACAGCCGCCTCTCTGCTTCAGTTGAGGTTTTCCAAGAACCTTAAAACAAGTTCAATA i aotNan1.NW_018514293v1 I 19 C 0 s otoGar3.GL873611 2215503 58 - 8137123 GCAA-AGCTGACTCCCTACATCAGCTGAGGTTTTTCAAGTAC-TTAAAAAAATGTAAATA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C e calJac3.chrUn_GL286444 1602 1069 + 138751 I a score=245534.000000 s hg38.chr7_KI270899v1_alt 115464 36 + 190869 TTAGGAAATCTACCAATATAATTCAATGAAATAATA s panTro5.chr7_NW_015973501v1_random 14031 36 - 19153 TTAGGAAATGTACCAATATAATTCAATGAAATAATA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76515 36 - 432965 TTAGGAAATCTACCAATATAATCCAATGAAATAATA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131790 36 + 85365473 TTAGGAAATCTACCAATATAATTCAACGAAATAATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983960 36 + 185818997 TTAGGACATCTACCAAAATAATTCGACAAAATAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600523 36 + 192294377 TTAGGACATCTACCAAAATAATTCGACAAAATAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4366460 36 - 9440265 TTACGACATCTACCAAAATAATTCGACAAAATAATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16954591 27 - 21915920 TTAGGACATCT---------TTTCAACAAAATAATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 91133 36 - 21531802 TTAGGACATCTACCAAAATAATTCAACAAAATAATA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 115264 36 - 2515279 TTAGGACATCTACCAAAATAATTCAACAAAATAATA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270633 36 + 6586416 TTAGGACATCCACCAAAATAATTCAACAAAATAATA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 2671 35 + 138751 TTAGGAAATCTACCAATCCAATGCCACAAAAT-ATA i calJac3.chrUn_GL286444 I 1069 C 0 s cebCap1.NW_016107703v1 481837 36 - 2125214 TTAGGAAATCCACCAATACAATGCAACAAAATAATA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 80414 36 + 376347 TTAGGAAATCTACCAATACAATGCAACAAAATAATA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2215561 36 - 8137123 TTAGGAAATCTGTCCACATAATTTAGCAAAATAATA i otoGar3.GL873611 C 0 I 1458 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=806585.000000 s hg38.chr7_KI270899v1_alt 115500 134 + 190869 CATCACAAAACAACCACTTCACCAGGGCAGGAAAGGCAGACAGCGTGAGCCACAGAGCAGCCAGCCATGACGGAACCATGTGCCATCACACTTCTGCCCCTGGGGGACCCCGGAACCCCAGAAATCAACCCTAA s panTro5.chr7_NW_015973501v1_random 14067 134 - 19153 CATCACAAAACAACCACTTCACCAGGGCAGGAAAGGCAGACAGCGTGAGCCACAGAGCAGCCAGCCATGACGGAACCATGTGCCATCACACTTCTGCCCCTGGGGGACCCCAGAACCCCAGAAATAAACCCTAA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76551 134 - 432965 CATCACAAAACAACCACTTCACCAGGGCAGGAAAGGCAGACAGCGTGAGCCACAGAGCAGCCAGCCATGACAGAACCATGTGCCATCACACTTCTGCCCCTGGGGGACCCCGGAACCCCAGAAATAAACCCTAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131826 133 + 85365473 CATCGCAAAACAACCACTTCAACAGGGCAGGAAAGGCAGACAGCATGAGCCGCAGAGCAGCTGGCCATGACGGAACCATGTGCCATCACACTTCTGCCCC-GGAGGACCCCGGAATCCCAGAAATAAACCCCAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33983996 131 + 185818997 CATCA-AAAACAACCACTGCAGCAGGGCAGGAAAGGCAGACAGCGTGAGCCGCGGAGCAGCCGGCCACGATGGAGCCATGTGCCAT--CACCTCTGCCTCTGGAGGACCCCGAAACCCCAGAAATAAACCCTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600559 131 + 192294377 CATCA-AAAACAACCACTGCAGCAGGGCAGGAAAGGCAGACAGCGTGAGCCGCGGAGCAGCCGGCCACGATGGAGCCATGTGCCAT--CACCTCTGCCTCTGGAGGACCCCGAAACCCCAGAAATAAACCCTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4366496 131 - 9440265 CATCA-AAAACAACCACTGCAGCAGGGCAGGAAAGGCAGACAGCGTGAGCCGCGGAGCAGCCGGCCACGATGGAGCCATGTGCCAT--CACCTCTGCCTTTGGAGGACCCCGAAACCCCAGAAATAAACCCTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16954618 131 - 21915920 CATCA-AAAACAACCACTGCAGCAGGGCAGGAAAGGCAGACAGCGTGAGCCGCGGAGCAGCCGGCCACGATGGAGCCATGTGCCAT--CACCTCTGCCTCTGGAGGACCCCGAAACCCCAGAAATAAACCCTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 91169 131 - 21531802 CATCACAAAACAACCACTGCAGCAGGGCAGGAAAGGCAGACGGCGTGAGCCG-GGAGCAGCCGGCCACGATGGAACCATGTGCCAT--CACCTCTGCCCCTGGAGGACCCCGAAACCCCAGAAATAAACCTTAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 115300 119 - 2515279 CATCA-AAAACAACCACTGCAGCAGGGCAGGAAAGGCAGACAGCGTGAGCCGCGGAGCAGCCGGCCACGATGGAGCCATGTGCCA--------------CTGGAGGACCCCGAAACCCCAGAAATAAACCCTAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270669 132 + 6586416 CATCCCAAAACAACCACTGCAGCAGGGCAGGAAAGGCAGACAGCGTGAGCCGCGGAGCAGCCGGCCACGATGGAACCACGTGCCAT--CACCTCTGCCCCTGGAGGACCCTGAAACCTCAGAAATAAACCCTAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 2706 121 + 138751 ATTCACAAA--CACCATTCAGA---GCCAG--AAAGCAGACAGAAAGAG-CTCAGAGCAGCCAG-CATGACGGAACCAAGTGCTATCACA-CTCTGTCCCTGAGGA--CCCAGAACCCCAGAAATAAA-CCTAA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 481873 132 - 2125214 AATCACAAAACAACCATTTCAAGAGGCCAGGAAAGGCAGACAGAGTGAACCTCAGAGCAGCCAGCCATGACAGAACCACGTGCCATCACACCTCTGTCCCTGAGGA--CCCGGAATCCCAGAAATAAACCCTAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 80450 132 + 376347 AACCACAAAATAACCATTTCAAGAGGCCAGGAAAGGCAGACAGAGTGAGCCTCAGAGCAGCCAGCCATGGCGGAACCACGTGCCATCACACCTCTGTCCCTGAGGA--CCCAGAACCGCAGAAATAAACCCTAA i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2215597 1458 - 8137123 I e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=126856.000000 s hg38.chr7_KI270899v1_alt 115634 17 + 190869 ACCAGG-CCCACCCATCC s panTro5.chr7_NW_015973501v1_random 14201 17 - 19153 ACCAGG-CCCACCCATCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76685 17 - 432965 ACCAGG-CCCACCCATCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131959 17 + 85365473 ACCAGG-CCCACCCATCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33984127 17 + 185818997 ACCAGG-CCCCCCTATCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600690 17 + 192294377 ACCAGG-CCCCCCTATCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4366627 17 - 9440265 ACCAGG-CCCCCCTATCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16954749 17 - 21915920 ACCAGG-CCCCCCTATCC i cerAty1.NW_012002954v1 C 0 I 512 s chlSab2.chr28 91300 18 - 21531802 ACCAGACCCCCCCCATCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 115419 17 - 2515279 ACCAGG-CCCCCCTATCC i manLeu1.NW_012101810v1 C 0 I 194 s colAng1.NW_012117710v1 270801 17 + 6586416 ACCAGG-CCTCCCCATCC i colAng1.NW_012117710v1 C 0 I 53 s calJac3.chrUn_GL286444 2827 17 + 138751 ATTAGG-CTCACCCATCC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 482005 17 - 2125214 ACTAGG-CTCACCCATCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 80582 17 + 376347 ACTAGG-CTCACCCATCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2217055 17 - 8137123 ACCATG-GCCACTCATCC i otoGar3.GL873611 I 1458 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=145802.000000 s hg38.chr7_KI270899v1_alt 115651 18 + 190869 CAGCAGCACCCAGGGAGG s panTro5.chr7_NW_015973501v1_random 14218 18 - 19153 CAGCAGCGCCCAGGGAGG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76702 18 - 432965 CAGTAGCGCCCAGGGAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131976 18 + 85365473 CAGCAGCGCTCAGGGAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33984144 18 + 185818997 CAACAGCACTCAGGGAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600707 18 + 192294377 CAACAGCACTCAGGGAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4366644 18 - 9440265 CAACAGCGCTCAGGGAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16955278 18 - 21915920 CAGCAGCACTCAGGGAGG i cerAty1.NW_012002954v1 I 512 C 0 s chlSab2.chr28 91318 18 - 21531802 CAGCAGCGCTCAGGGAGG i chlSab2.chr28 C 0 I 234 s manLeu1.NW_012101810v1 115630 18 - 2515279 CAGCAGCACTCAGGGAGG i manLeu1.NW_012101810v1 I 194 C 0 s colAng1.NW_012117710v1 270871 18 + 6586416 CAGCAGCGCTCAGGGAGG i colAng1.NW_012117710v1 I 53 C 0 s calJac3.chrUn_GL286444 2844 18 + 138751 CAGCAGTGCTCAGGGAAG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 482022 18 - 2125214 CAGCAGTGCTCAGAGAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 80599 18 + 376347 CAGCAGTGCTCGGGGAGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2217072 17 - 8137123 CAGCAACACCCAGGGAG- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=66780.000000 s hg38.chr7_KI270899v1_alt 115669 7 + 190869 CCTGGAC s panTro5.chr7_NW_015973501v1_random 14236 7 - 19153 CCTGGAC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76720 7 - 432965 CCTGGAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 131994 7 + 85365473 CCTGGAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33984162 7 + 185818997 CCTGGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33600725 7 + 192294377 CCTGGAC i macFas5.chr3 C 0 I 315 s macNem1.NW_012019910v1 4366662 7 - 9440265 CCTGGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16955296 7 - 21915920 CCTGGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 91570 7 - 21531802 CCTGGAC i chlSab2.chr28 I 234 C 0 s manLeu1.NW_012101810v1 115648 7 - 2515279 CCTGGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270889 7 + 6586416 CCTGGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 2862 7 + 138751 CCTGGAC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 482040 7 - 2125214 CCTGGAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 80617 7 + 376347 CCTGGAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2217089 7 - 8137123 TATGGAC i otoGar3.GL873611 C 0 I 9 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=233661.000000 s hg38.chr7_KI270899v1_alt 115676 27 + 190869 GGT--CACCACACACCCACAGCCACCATG s panTro5.chr7_NW_015973501v1_random 14243 27 - 19153 GGT--CACCACACACCCACAGCCACCATG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76727 27 - 432965 GGT--CACCACACACCCACAGCCACCATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 132001 27 + 85365473 GGT--CACCACACACCCACGGCCACCATC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33984169 27 + 185818997 GGT--CACCACACACCCACAGCCACCATC i rheMac8.chr3 C 0 I 315 s macFas5.chr3 33601047 27 + 192294377 GGT--CACCACACACCCACAGCCACCATT i macFas5.chr3 I 315 C 0 s macNem1.NW_012019910v1 4366669 27 - 9440265 GGT--CACCACACACCCACAGCCACCATC i macNem1.NW_012019910v1 C 0 I 210 s cerAty1.NW_012002954v1 16955303 27 - 21915920 AGT--CACCACACACCCACAGCCACCATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 91577 27 - 21531802 GGT--CACCACACACCCACAGCCACCATC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 115655 27 - 2515279 GGT--CACCACACACCCACAGCCACCATT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 270896 27 + 6586416 GGT--CACCGCACACCCACAGCCACCATC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 2869 27 + 138751 GGT--CACCACACACCCACAGCCACCATT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 482047 27 - 2125214 GGT--CACCACACACCCACAGCCACCATT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 80624 27 + 376347 GGT--CACCACACAGCCACAGCCACCATT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2217105 28 - 8137123 GATAACACCAC-CACCCACAGCCATTATC i otoGar3.GL873611 I 9 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=3702348.000000 s hg38.chr7_KI270899v1_alt 115703 589 + 190869 GCAGCAGCCAG-CATTCCCCTGCTGGGGGCAGGC-AGTATCCGCTC-CTTGGAGGGTGAGATGCCTCAGACCTGGG--TGGGCCTCATCCATACACTTCCCAGCAACCGTGCATCT---CGGCTGGCAGCCTTCACTCCCGGAGGGGTGGGTACC-GGG---GTGGAGGGACGGCATAGGGTGATCCGCAGCTG----------------------------CCCTGAGGGTGCCCCAGCCTGGC-T-----------GTTTACCT------GAGC-CTGTTCCTTTCCCCAGAAGACc----------aaaaaatcatgaaataa-----gagctacaaagatggga-aaga-ggcaaaattcccatattttgcagatggtttg-agattgatctggaaaacac-agaggatcaactgcaaggctgtaagaa-acaggagcactta-gcataacaaaat-gaacactagtcaatagtcaccgatatccacttagaaaacagga--aaataaagggggaaaa-tctcattcacaat--agcagaaa-gacacataaaatcctgat--ggtggg--gaattcagtgagaaaggtaga-gttgt-tgaaggaaacggcaaaactctcctgaggagcattttagaagcaataaatggagacttagattttagactagaaaacgc-a s panTro5.chr7_NW_015973501v1_random 14270 593 - 19153 GCAGCAGCCAG-CATTCCCCTGCTGGGGGCGGGC-AGTATCCGCTC-CTTGGAGGGTGAGATGCCTCAGACCTGGG--TGGGCCTCATCCATGCACTTCCCAGCAACCGTGCATCT---CGGCTGGCAGCCTTCACTCCCAGAGGGGTGGGTACCAGGG---GTGGAGGGACGGCATAGGGTGATCCGCAGCTG----------------------------CCCTGAGGGT--CCCAGCCTGGCGC-----------GTTTACCT------GAGCGCTGTTCCTTTCCGCAGAAGACC----------AAAAAATCATGAAATAA-----GACTAACAAAGATGGGAGAAGAAGGCAAAATTCCCATATTTTGCAGATGGTT-G-AGATTGATCTGGAAAACAC-AGAGGATCAACTGCAAGGCTGTAAGAA-ACAGGAGCACTTAAGCATAACAAAATTGAACACTAGTCAATAGTCACCGATATCCACT-AGAAAACAGGAGAAAATAAAGGGGGAAAAATCTCAT-CACAAT--AGCAGAAAAGACACATAAAATCCTGAT--GGTGGG---AATTCAGTGGAAAAGGTAGATGTTGT--GAAGAAAACGGCAAAACTCTCCTGAGAGACATTTTAGAAGCAATAAATGGAGACTTAGATTTTAGACTAGAAAACG--A i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 76754 592 - 432965 GCAGCAGCCAG-CATCCCCCTGCTGGGGGCGGGC-AGTATCCGCTC-CTTGGAGGGTGAGATGCCTCAGACCTGGG--TGGGCCTCATCCATGCACTTCCCAGTAACTGTGCATCT---CAGCTGGCAGCCTTCATTCCCGGAGGGGTGGGTACCAGGG---ATGGAGGGATGGCATAGGGTGATCCGCAGCTG----------------------------CCCTGAGGGTGCCCCAGCCTGGC-T-----------GCTTACCT------GAGC-CCGTTCCTTTCCCCAGAAGACC----------AAAAAATCATGAAATAA-----GAGCTACAAAGATGGGA-AAGA-GGCAAAATTCCCATATTTTGCAGATGGTTTG-AGATTGATCTGGAAAACAC-AGAGGATCAACTGCAAGGCCGTAAGAA-ACAGGAGCACTTA-GCATAACAAAAT-GAACACTAGTCAATAGTCACTGATATCCACTTAGAAAACAGGA--AAATAAAGGGGGAAAAATCTCATTCACAAT--AGCAGAAA-GACAC--AAAATCCTGAT-GGGTGGGGGGAATTCAGTGAGAAAGGTAGA-GTTGT-TGAAGGAAACGGCAAAACTCTCCTGAGGAGCATTTTAAAAGCAATAAATGGAGACTTAGATTTTAGACTAGAAAACGC-A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 132028 568 + 85365473 GCAGCAGCCAG-CATTCCCCTGCTAGGGGCAGGC-AGTATTGGCTC-CTTGGAGGGTGAGATGCCTCATACCTGGG--TGGGCCTCATCCATGCACTTCCGAACAACCGTGCATCT---CAGCCGGCAGCCTTCATTCCTGGAGGGGTGGGTACCAGGG---GTGGAGGGACGGCATAGGGTGATCCGCAGCTG----------------------------CCCTGAGGGTGCCCCAGCCTGGC-T-----------GCTTACCT------GAGC-CTTTTCCTTTCCCCAGAAGACC----------AAAAAATCATGAAATAA-----GAGCTACAAAGATGGGA-AAGA-GGCAAGATTCCCATATTTTGCAGATGGTTTG-AGATTGATC--------------------------AGGCTGTAAGAA-ACAGGAGCACTTA-GCATCACAAaat-gcacactagtcgatagtcaccaatatccacttggaaaacagga--aaataaagggggaaaaatctcattcacaat--agcagaaa-gacacataaaatcctgat-gggtggg--gaatttagtgagaaaggtaga-gttgt-tgaaggaaacagcaaaactctcctgaggagcattttaaaagcaataaatggagacttagattttagactagaaaatgcaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33984511 584 + 185818997 GCAGCAGCCAG-CATTCCCCCACTGGGGATGCGC-AGTATCGGCTC-CTTGGAAGGTGGGATGCCTCGGACCTGGG--TGGGCCTCATCCATGCACTTCCTAACAAACGTGCACCT---CTGCCGGCAGCCTTCACTCCCCGAGGGGTGGGTCCC-GGG---GTGGAGGGACAGCATGGGGTGATCTGCTGCTG----------------------------CCCTGAGGGGGCCCCAGCCTGGC-T-----------GCTTCCCT------GAGC-CTGTTCCTTTCCACAGAAGACC------AAAAAAAAAATCATGAAATAA-----GAGCTACAAAGGTGGGA-AAGA-GGCAAAATTCCCGTATTTTGTAGATGGTTGG-AGGTTGATCTGGAAAAGAC---AGGATCAACTGCAAGGCTGCAAGAA-ACAGAGGCACTTA-GCCTAACAAAAC-GCACACTAGCCAATGCTCCCCGATCTCCACTTAGGAAACAGGA--AAATAAAGCGGGAAGAATCTCGTTCACAAT--AGCAGAAA-GACACACGAAATCCTGAT-GGGTGGG---GATTCAGTGAGCAAGGCGGA-GTTGT-TGAAGGAAACGGCAAAAACCCTCT--------TTTTAAAAGTAATAAATGGAGACTCAGATTTCAGACTAGAAAACGC-A i rheMac8.chr3 I 315 I 1 s macFas5.chr3 33601074 585 + 192294377 GCAGCAGCCAG-CATTCCCCCACTGGGGATGCGC-AGTATCGGCTC-CTTGGAGGGTGGGATGCCTCGGACCTGGG--TGGGCCTCATCCATGCACTTCCTAACAAACGTGCACCT---CGGCCGGCAGCCTTCACTCCCCGAGGGGTGGGTCCCAGGG---GTGGAGGGACAGCATGGGGTGATCTGCTGCTG----------------------------CCCTGAGGGGGCCCCAGCCTGGC-T-----------GCTTCCCT------GAGC-CTGTTCCTTTCCACAGAAGACC------AAAAAAAAAATCATGAAATAA-----GAGCTACAAAGGTGGGA-AAGA-GGCAAAATTCCCGTATTTTGCAGATGGTTGG-AGGTTGATCTGGAAAAGAC---AGGATCAACTGCAAGGCTGCAAGAA-ACAGAGGCACTTA-GCCTAACAAAAC-GCACACTAGCCAATGCTCCCCGATCTCCACTTAGGAAACAGGA--AAATAAAGCGGGAAGAATCTCGTTCACAAT--AGCAGAAA-GACACACGAAATCCTGAT-GGGTGGG---GATTCAGTGAGCAAGGCGGA-GTTGT-TGAAGGAAACGGCAAAAACCCTCT--------TTTTAAAAGTAATAAATGGAGACTCAGATTTCAGACTAGAAAACGC-A i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4366906 607 - 9440265 GCAGCAGCCAG-CATTCCCCCACTGGGGATGCGC-AGTATCGGCTC-CTTGGAGGGTGGGATGCCTCGGACCTGGG--TGGGCCTCATCCATGCACTTCCTAACAAACGTGCACCT---CGGCTGGCAGCCTTCACTCCCCGAGGGGTGGGTGCCAGGG---GTGGAGGGACAGCATGGGGTGATCTGCTGCTGCCCTGAGGGGGCCCCAGCCTGGCTGCTTCCCTGAGGGGGCCCCAGCCTGGC-T-----------GCTTCCCT------GAGC-CTGTTCCTTTCCACAGAAGACC--------AAAAAAAATCATGAAATAA-----GAGCTACAAAGGTGGGA-AAGA-GGCAAAATTCCCGTATTTTGCAGATGGTTGG-AGGTTGATCTGGAAAAGAC---AGGATCAACTGCAAGGCTGCAAGAA-ACAGAGGCACTTA-GCCTAACAAAAC-GCACACTAGCCAATGCTCCCCGATCTCCACTTAGGAAACAGGA--AAATAAAGCGGGAAGAATCTCGTTCACAAT--AGCAGAAA-GACACACGAAATCCTGAT-GGGTGGG---GATTCAGTGAGCAAGGCGGA-GTTGT-TGAAGGAAACGGCAAAAACCCTCT--------TTTTAAAAGTAATAAATGGAGACTCAGATTTCAGACTAGAAAA----- i macNem1.NW_012019910v1 I 210 C 0 s cerAty1.NW_012002954v1 16955330 583 - 21915920 GCAGCAGCCAG-CATTCCCCCACTGGGGATGCGC-AGTATCGGCTC-CTTGGAGGGTGGGATGTCTCAGACCTGGG--TGGGCCTCATCCACGCACTTCCTAACAAATGTGCACCT---CGGCCGGCAGCCTTCACTCCCCGAGGGGTGGGTGCCAGGG---GTGGAGGGACAGCGTGGGGTGATCTGCAGCTG----------------------------CCCTGAGGGGGCCCCAGCCTGGC-T-----------GCTTCCCT------GAGC-CTGTTCCTTTCCGCAGAAGACC--------AAAAAAAATCATGAAATAA-----GAGCTACAAAGGTGGGA-AAGA-GGCAAAATTCCCGTATTTTGCAGATGGTTGG-AGGTTGATCTGGAAAAGAC---AGGATCAACTGCAAGTCTGCAAGAA-ACAGAGGCACTTA-GCCTAACAAAAC-GCACACTAGCCAATGCTCCCCGATCTCCACTTAGGAAACAGGA--AAATAAAGCGGAAAGAATCTCGTTCACAAT--AGCAGAAA-GACACACGAAATCCTGAT-GGGTGGG---GATTCAGTGAGCAAGGCAGA-GTTGT-TGAAGGAAACGGCAAAAACCCTCT--------TTTTAAAAGTAATAAATGGAGACTCAGATTTCAGACTAGAAAACAC-A i cerAty1.NW_012002954v1 C 0 I 26 s chlSab2.chr28 91604 585 - 21531802 GCAGCAGCCAG-CATTCCCCCGCTGGGGGTGCAC-AGTATCGGGTC-CTTGGAGGGTGGGATGCCTCGGACCTGGG--TGGGCCTCATCTACACGCTTCCTAACAACCGTGCACCT---CGGCTGGCAGCCTTCACTCCCCGAGGGGTGGGTGCCAGGG---GCGGAGGGACAGCGTGGGGTGATCAGCAGCTG----------------------------CCCTGAGGAGG-CCCAGCCTGGC-T-----------GCTTCCCT------GAGC-CTGTTCCTTTCCACAGAAGACC---------AAAAACATCATGAAATAA-----GAGCGACAAAGATGGGA-AAGA-GGCAAAATTCCCATATTTTGCAGATGGCTTG-AGGTTGATCTGGAAAAGAC-AGAGGATCAACTGCAAGGCTGCAAGAA-ACAGGAGCACTTA-GCCTAACAAAAC-GCACACTAGCCAACGCTCCCCAATCTCCACTTAGGAAACAGGA--AAATAAAGCAGGAAACATCTCGTTCACGATAGAGCGGAAA-GACACAAGAAATCCCGAT-GGGTGGG---AATTCAGTGAGCGAGGCGGA-GTTGT-TGAAGGAAACGGCAAAAACTCTCT--------TTTTAAAAGTAATAAATGGAGACTCAGATTTCAGACTAGAAAACGC-A i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 115682 583 - 2515279 GCAGCAGCCAG-CATTCCCCCGCTGGGGATGCAC-AGTGTCGGCTC-CTTGGAGGGTGGGATGCCTCGGACCTGGG--TGGGCCTCATCCACGCACTTCCTAACAAACGTGCACCT---CGGCCGGCAGCCTTCACTCCCCGAGGGGTGGGTGCCAGGG---GTGGAGGGACAGCGTGGGGTGATCTGCAGCTG----------------------------CCCTGAGGGGGCCCCAGCCTGGC-T-----------GCTTCCCT------GAGC-CTGTTCCTTTCCGCAGAAGACC--------AAAAAAAATCATGAAATAA-----GAGCTACAAAGGTGGGA-AAGA-GGCAAAATTCCCGTATTTTGCAGATGGTTGG-AGGTTGATCTGGAAAAGAC---AGGATCAACTGCAAGGCTGCAAGAA-ACAGAGGCACTTA-GCCTAACAAAAC-GCACACTAGCCAATGCTCCCCGATCTCTACTTAGGAAACAGGA--AAATAAAGCGGGAAGAACCTCGTTCACAAT--AGCAGAAA-GACACACGAAATCCTGAT-GGGTGGG---GATTCAGTGAGCAAGGCGGA-GTTGT-TGAAGGAAACGGCAAAAACCCTCT--------TTTTAAAAGTAATAAATGGAGACTCAGATTTCAGAATAGAAAACGC-A i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 270923 588 + 6586416 GCAGCAGCCAG-CATTCCCCCGCTGGGGGTGCGC-AGGATCGGCTC-CTTGGAGGGTGGGATGCCTCGGACCTGGG--TGGGCCTCATCCACGCACTTCCTAACAACCGTGCAGCT---TGGCCGGCAGCCTTCACTCCCCGAGGGGTGGGTGCCAGGG---GTGGAGGGACAACGTGGGGTGATCGGCAGCTG----------------------------CCCTGAGGGGGCCCCAGCCTGGC-T-----------GCTTCCCT------GAGC-CTGTTCCTTTCCGCAGAAGACC---------CAAAACATCATGAAATAA-----GAGATACAAAGATGGGA-AAGA-GGCAAAATTCCCATATTTTGCAGATGGTTTG-AGGTTGATCTGGAAAAGAC---AGAGTCAACTGCAAGGCTGCAAGAA-ACAGGAGCACTTA-GCCTAACAAAAC-ACACACTAGCCAGTGCTCCCCGATCTCCACTTAGGAAACAGGA--AAATAAAGCGGGAAGAATCTCATTCGCGAT--TGCAGAAA-GACACA--AAATCCCGAT-GGGTGGG---GATTCGGTGAGCAAGGCGGA-GCTGT-TGAACGAAACGGTAAAACTCTCCCAAGGAACGTTTTAAAAGCAACAGATGGAGACTCAGATTTCAGACTAGAAAACAC-G i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chrUn_GL286444 2896 537 + 138751 ACAGCAGCCAG-CACTCT-CTGCTGGGGGCTGGC-CAGATCAGCAC-CTTGGAGGGTGGTCTGCCCTGGACCTGGA--CAGGTCTCATCTATGCACTTCCTAACAACCCAGCATCTCGGCGGGCCGCAGCTTTC------------------------------------ACTGCATGGGGTGATCAGCGGCTG----------------------------CCCTA----------AGCCTGGC-T-----------GCTTACCT------GAGC-CTGTTCCTTTCCCCAGAAGACc--------aaaaaaaatcataaaataa-----gagctacaaagatagga-aaga-ggcaaaattgccatattttacagacggtttg-agatcaatctagaaaacac---aggatggactgcaagg--gtaagaa-ataggagcacttc-acataagaaaat-gcacactagtcaatagtcagtgatacccacttagaaaacag----aaataaag----------ctcattcacaat--agcagaaa-aacacataaaatcctgat-tggtgga--gaatttagtgagaaaggtgga-gctgt-tgaaggaaacagcaaaactctcctgaggaacattttaaaagcaataaatggagacttagatattagactagaaaacgc-a i calJac3.chrUn_GL286444 C 0 I 1 s cebCap1.NW_016107703v1 482074 534 - 2125214 ACAGCAGCCAG-CACTCTCCTGCTGGGGGCTGGC-GGGATCAACGC-CTTGGAGGGTGGTCTGCCCCGGACCTGGG--CGGGCCTCATCCATGCACTTCCTAACAACCCAGCATCT---TGGGTGTCAGCTTTG------------------------------------ACAGCATGAGGTGATCAGCAGCTG----------------------------CCATG----------AGCCTGGC-T-----------GCTTACCT------GAGC-CTGTTCCTTTCCCCAGAAGACC---------AAAAAAATCATAAAATAA-----AAGCTACGAAGATGGGA-AAGA-GGCAAAATTGCCATATTTTGCAGATGGTTTA-AGATCGATCTAGAAAACAC-AGAGGGTGGACTGCAAGG--GTAAGAA-ATAGGAGCACTTC-ACATAAGAAAAT-GCACACCAGTCAATAGTCAGTGATATCCACTTAGAAAACAG----AAAAAAAG----------TTCATTCACAAT--AGCAGAAA-AACACATAAAATCCTGAT-GGGTGAG--GAATTTAGTGAGAAAGGTGGA-GCTGT-TGAAGGAAACAGCAAAACTCTACTGAGGAACATTTTAAAAGTGATAAATGGACAC--AGGTTTTAGACTAGAAAACGC-A i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 80651 512 + 376347 GTGGCAGCCAG-CACTCTCCTGCTGGGGGCTGGC-CGGATCAGCAC-CTTGGAGAGTGGTCTGCCCCGGACCTGGG--CGGGCCTCATCCACGCACTCCCTAACAGCCCAGCGTCT----------CAGCTTTC------------------------------------ACGGCATGGGGTGATTCGCAGCTG----------------------------CCCTG----------AGCCTGGC-T-----------GCTTGCCT------GAGC-CTGTTCCTTTCCCCAGAAGACC--------AAAAAAAATCACAAAATAA-----GAGCTACAAAGATGGGA-AAAA-GGGAAAATTGCC-TATTTTGCAGACGGTTTG-AGATGGATCTGGAAGACAC-AGAGGATGGGCTGCGAGGCTGTAAGAA-ATAGGAGCACGTC-ACATAAGAAAAC-GCACACCAGTCAACAGTCAGTGATATCCACTTAGAAAACAG----AAATAAAG----------CTCATTCACAAT--AGCAGAAA-A--ACATAAAATCCTGAT-GGGTGGA--GAATTTA------------------GT-TGAAGGAAACAGCAAAACTCTCCTGAGGAACATTTTAAAAGCGGTAAATGGAGACTTAGATTTTAGACTAGAAAATGC-A i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 2217133 607 - 8137123 GAAGTAG--AGCCATGCCCCTGCTTTGGATGGGCTGGGGTCAGCTCTTTTGGGTGGCGGG--GCCCTGGGCCTTGAGCCGGTCCCCTTCTGTGCACTTCCTAACAAGTGTTCCTTG---TGCCAACCAGCCTCTGCTCTCTGCATAGCAGGTGCCAAGGCCAGGGGAGGACAGAGGTGGGGCAGTCAGCATCTG----------------------------CCCTGAGGATGCTCCAGCCTGGC-TGCGTGGGGTGAGCCTACTTCTCGAAGGGT-CTGTTCCTTTCCCTAGAAGACcaaaaaaaaaaaaaaaaaaactaaataagttgtgaatttcatttacagga-aagagggcaaaattgccatgttttgcagatggtttgaaagttgatctggaaaacataagaggatcaacttcagggctgttagaagacaggagcattga-gcacagcaaaat-acacacagactgatagtcagcaacagccacttagaacacagga--caataaaatgggaaaaattgcatttgcaat--tgtagaaa-aaca----aaatcccgagagagtggg-ggaattcaatgagtaaagtgca-gtcgtatgaaggaaacagcaaaactctcctgagggatattct-----------------------tttttaaaagagataacac-- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=78716.000000 s hg38.chr7_KI270899v1_alt 116292 28 + 190869 cattgc-agagttgGGAAGACTGGATTTT s panTro5.chr7_NW_015973501v1_random 14863 28 - 19153 CATTGCGAGAGTTGG-AAGACTGGATTTT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 77346 28 - 432965 CATTGC-AGAGCTGGGAAGACTGGATTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 132596 28 + 85365473 aatcgc-agagctgggaagactGGATTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33985096 23 + 185818997 CATCGT-AGCGCTGGGAAGAC-AGA---- i rheMac8.chr3 I 1 I 2 s macFas5.chr3 33601660 23 + 192294377 CATCGT-AGCGCTGGGAAGAC-AGA---- i macFas5.chr3 I 1 I 2 s macNem1.NW_012019910v1 4367513 20 - 9440265 ---CGT-AGCGCTGGGAAGAC-AGA---- i macNem1.NW_012019910v1 C 0 I 2 s chlSab2.chr28 92190 24 - 21531802 CATCGT-AGCGCTGGGAAGACGAGA---- i chlSab2.chr28 I 1 I 2 s manLeu1.NW_012101810v1 116266 23 - 2515279 CATCGT-AGCGCTGGGAAGAC-AGA---- i manLeu1.NW_012101810v1 I 1 I 2 s colAng1.NW_012117710v1 271512 24 + 6586416 CATTGT-AGCGCGGGGAAGACGAGA---- i colAng1.NW_012117710v1 I 1 I 2 s calJac3.chrUn_GL286444 3434 27 + 138751 tattgt-aGGGCTAGGAAGATTGGATTT- i calJac3.chrUn_GL286444 I 1 I 1 s cebCap1.NW_016107703v1 482609 27 - 2125214 TATTGT-AGGGCTAGGAAGATTGGATTT- i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 81164 26 + 376347 TACTGT-AGGGCTAGGAAGATTGGATT-- i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2217740 18 - 8137123 ---tgt-agagttgggaagact------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e cerAty1.NW_012002954v1 16955913 26 - 21915920 I e saiBol1.JH378296 343440 0 - 2409723 C a score=2043690.000000 s hg38.chr7_KI270899v1_alt 116320 294 + 190869 -TTTTTTTTCATTGAGCATCTGTATTTCTATACATGGAAAAGGACCATAAAGTTATTTTCAATGAGTTACTATTAT---TATCATTATTACTGTCATGAGAGGCGAAATCTTACAGCTGATGATTTCAGGCAGACTCTAGTGCCGGGC----CTCAAGTCACAGGATCCTTCTCCCCCACCTCCTGG-CCTGATCCTTttcccatctctgagcctcagtctcctcctctgtgaaatggacacagtgacggtaactccttggtGGCCTGAGGACAGGTG--CACACG-CAGGAAGAGCCCCACCTGG s panTro5.chr7_NW_015973501v1_random 14891 297 - 19153 -TTTTTTT-CATTGAGCATCTGTATTTCTATACATGGAAAAGGACCATAAAGTTATTTTCAATGAGttactattat---tatcattattactgttatGAGAGGCGAAATCTtacagctgatgatttcaggcagactctagtgccgggcgggcctcaagtcacaggatccttctcccccacctcctgg-cctgatccttttcccatctctgagcctcagtctcctcctctgtgaaatggacacagtgatggtaactccttcgtggCCTGAGGACAGGTG--CACACG-CATGAAGAGCCCCACCTGG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 77374 293 - 432965 -TTTTTTG-CATTGAGCATCTGTATTTCTATACATGGAAAAGGACCATAAAGTTATTTTCAATGAGttactattat---tatcattattactgttatGAGAGGCGAAATCTTACTGCTGATGATCTCAGGCAGACTCTAGTGCCGGGC----CTCAAGTCACAGGATCCTTCTCCCCGACCTCCTGG-CCTGATCCTTttcccatctctgagcctcagtctcctcctctgtgaaatggactcagtgatggtaactccttcgtggCCTGAGGACAGGTG--CACACG-CATGAAGAGCCCCACCTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 132624 291 + 85365473 -TTTTTT--CATTGAGCATCTGTATTTCTATACATGGAAAAGGACCATAAAGTTATTTTCAATGAGttactattat---tatcattattactgttatGAGAGGTGAAATCTTGCAGCGGATGGTTTCAGGCAGACTCTAGTGCCGGGC----CACAAGTCACAGGATCCCTCTCCCCCATCTCCTGG-CCTGATCCTTttcccatctctgagcctcagtctcctcctctgtgaaatggacacagtgatggtaactccct-GTGGCCTGAGGACAGGTG--CACACG-CATGAAGAGCCCCACCTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33985121 289 + 185818997 -TTTTTT--CGTTGAGCGTATGTATTTCTATACGTGGAAAAGGACCATAAAGTTATTTTCAACGAGTTACTATTAT---TATCGTTATTACTGTTAGGAGAGGCGAAATCTTAGAGCAGATGGTTTCAGG-----TCTAGCGCGGGGC----CACAAGTCGCAGGATCCTTCGTCCACATCTCCTGG-CCTGATCCTTttcccatctctgagcctcagtctcctcctctgtgaaatggacacagtgatggtgcctccctcgtggCCTGAGGACAGGTGCTCACATA-CATGAAGAGCCCCACCTGA i rheMac8.chr3 I 2 C 0 s macFas5.chr3 33601685 294 + 192294377 -TTTTTT--CGTTGAGCGTATGTATTTCTATACGTGGAAAAGGACCATAAAGTTATTTTCAACGAGTTACTATTAT---TATCGTTATTACTGTTAGGAGAGGCGAAATCTTAGAGCAGATGGTTTCAGGCAGACTCTAGCGCGGGGC----CACAAGTCGCAGGATCCTTCGTCCACATCTCCTGG-CCTGATCCTTttcccatctctgagcctcagtctcctcctctgtgaaatggacacagtgatggtgcctccctcgtggCCTGAGGACAGGTGCTCACATA-CATGAAGAGCCCCACCTGA i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 4367535 294 - 9440265 -TTTTTT--CGTTGAGCGTATGTATTTCTATACATGGAAAAGGACCATAAAGTTATTTTCAACGAGTTACTATTAT---TATCGTTATTACTGTTAGGAGAGGCGAAATCTTAGAGCAGATGGTTTCAGGCAGACTCTAGCGCGGGGC----CACAAGTCGCAGGATCCTTCGTCCACATCTCCTGG-CCTGATCCTTttcccatctctgagcctcagtctcctcctctgtgaaatggacacagtgatggtgcctccctcgtggCCTGAGGACAGGTGCTCACATA-CATGAAGAGCCCCACCTGA i macNem1.NW_012019910v1 I 2 C 0 s cerAty1.NW_012002954v1 16955939 294 - 21915920 -TTTTTT--CGTTGAGCGTATGTATTTCTATACGTGGAAAAGGACCATAAAGTTATTTTCAACGAGTTACTATTAT---TATCGTTATTACTGTTAGGAGAGGCGAAATCTTAGAGCAGATGGTTTCAGGCAGACTCTAGCGCGGGGC----CACAAGTCACAGGATCCTTCGTCCACATCTCCTGG-CCTGATCCTTttcccatctctgagcctcagtctcctcctctgtgaaatggacacagtgatggtgcctccctcgtggCCTGAGGCCAGGTGCTCACACA-CATGAAGAGCTCCACCTGA i cerAty1.NW_012002954v1 I 26 C 0 s chlSab2.chr28 92216 294 - 21531802 -TTTTTT--CGTTGAGCGTATGTATTTCTATACGAGGAAAAGGACCATAAAGTTATTTTCAACGAGTTACTATTAG---TATCGTTATTACTGTTAGGAGAGGTGAAATCTTAGAGCAGATGGTTTCAGGCAGACTCTACCGCGGGGC----CACAAGTCGCAGGATCCTTCTCCCACATCTCCTGG-CCTGATCCTTttcccatctccgagcctcagtctcctcctctgtgaaatggacacaatgacggtgcctccctcgtggCCTGAGGACAGGTGCTCACACA-CACAAAGAGCCCCACCTGG i chlSab2.chr28 I 2 C 0 s manLeu1.NW_012101810v1 116291 294 - 2515279 -TTTTTT--CATTGAGCGTATGTATTTCTACACGTGGAAAAGGACCATAAAGTTATTTTCAACTAGTTACTATTAT---TATCGTTATTACTGTTAGGAGAGGCGAAATCTTAGAGCAGATGGTTTCAGGCAGACTCTAGCGCAGGGC----CACAAGTCACAGGATCCTTCGTCCACATCTCCTGG-CCTGATCCTTttcccatctctgagcctcagtctcctcctctgtgaaatggacacagtgatggtgcctcccttgtggCCTGAGGACAGGTGCTCACACA-CATGAAGAGCCCCACCTGA i manLeu1.NW_012101810v1 I 2 C 0 s colAng1.NW_012117710v1 271538 294 + 6586416 -TTTTCT--CATTGAGCCTGTGTATTTCTATACGTGGAAAAGGACCATAAAGATATTTTCAACGAGTTACTACTAT---TATTGTTCTTACTGTTATGAGAGGCGAAATCTTACAGCAGATGGTTTCAGGCAGACTCTAGCGCGGGGC----CACAAGTCGCAGGATCCTTCTTCCACATCTCCTGG-CCTGATCCTTttcccatctctgagcctcagtctcctcccctgtgaaatggacacagtgatggtgcctcccttgtggCCTGAGGACAGGTGCTCACACA-CACGAACAGCCCCACCTGG i colAng1.NW_012117710v1 I 2 I 2101 s calJac3.chrUn_GL286444 3462 242 + 138751 -TTTTTT--CATTGAGCATATGTATTTCTATACATGGAAAAGGACCA------TATTTTCAATGAGTTATTATTAT---TATCGTTATTCCTGTTAT--GAGGCAAAATCTTAGAGCA----------------------------------------------GATGCTTCTTCCCCGCCTCCTGG-CCTGATCCTTttcccatctctgagcctcagcctcctcctctgtgaaatgggcaccatgatggtaactccctcgtagCCCGAGGATAGGTG--CACTCA-CATGAAGAGCCCCACCTGG i calJac3.chrUn_GL286444 I 1 C 0 s cebCap1.NW_016107703v1 482636 241 - 2125214 -TTTTTT--CATTGAGCATATGTATTTCTATACATGGAAAAGGACCA------TATTTTCAATGAG---TTATTAT---TATCATTATTCCTATTGTGAGAGGCAAAATCTTACAGCA----------------------------------------------GATCCTTCTTCCCCACCTCCTGG-CCTGATCCTTTTCCCAtctctgagccttagcctcctcctctgtgaaatgggcaccgttatggtaactccctcgtggCCCAAGGACAGGTG--CACTCG-CATGAAGAGCCCCACCTGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 81190 244 + 376347 -TTTTTT--CATTGAACATATGTAGTTCTATATATGGAAAAGAACCA------TATTTTCAATGAGttattattat---tatcattattcccattatGAGAGGCAAAATCTTACAGCA----------------------------------------------GATCCTTCTTCCCCACCTcctgg-ccggatccttttcccatccctgagcctcagcctccccctctgtgaaatgggcaccgtgatggtaactctctcgtggCCCAAGGACAGGTG--CACTCG-CATGAAGAGCCCCACCCGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2217758 287 - 8137123 cCTTTTT--TATTGAACATATATATTTCAACACATGGAAAAAGACCATAAAGTTATTTTCAATGAATTATTACTATCACCATCATTATCACTATTATGAGAGGCAAACTCTTACACCAAATAGTTtca-gcagact---------agt----tttcagccacaaggtgccacctcacagcagtgtggtcctgaccctttccacatctctcagcctcagt-ttctcacctgtgaaattgacacaatgatgacaacctcctcatcaccgggtGAGAGGTG--CACAGGCCGTGAAGAGCTGCACCTGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=64666.000000 s hg38.chr7_KI270899v1_alt 116614 11 + 190869 CGGGCGCCAGG s panTro5.chr7_NW_015973501v1_random 15188 11 - 19153 CGGGCGCCAGG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 77667 11 - 432965 CGGGCGCCAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 132915 11 + 85365473 CGGGCGCCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33985410 11 + 185818997 GGGGCGCCAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33601979 11 + 192294377 GGGGCGCCAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4367829 11 - 9440265 GGGGCCCCAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16956233 11 - 21915920 GGGGCGCCAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 92510 11 - 21531802 GGGGCGCCAGG i chlSab2.chr28 C 0 I 932 s manLeu1.NW_012101810v1 116585 11 - 2515279 GGGGCGCCAGG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 3704 11 + 138751 CTGGCCCTAGG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 482877 11 - 2125214 CTGGCACTAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 81434 11 + 376347 CTGGCACTAGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218045 11 - 8137123 CTGGCTCTAGG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e saiBol1.JH378296 343440 0 - 2409723 C a score=48692.000000 s hg38.chr7_KI270899v1_alt 116625 10 + 190869 -AAACCGCAGC s panTro5.chr7_NW_015973501v1_random 15199 10 - 19153 -AAACCGCAGC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 77678 10 - 432965 -AAACCGCAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 132926 10 + 85365473 -AAACCGCAGC i nomLeu3.chr20 C 0 I 710 s rheMac8.chr3 33985421 10 + 185818997 -GAACCATAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33601990 10 + 192294377 -GAACCATAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4367840 10 - 9440265 -GAACCATAGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16956244 10 - 21915920 -GAACCATAGC i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 116596 10 - 2515279 -GAACCATAGC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 3715 10 + 138751 -AAGCCGTAGC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 482888 10 - 2125214 -AAGCCATAGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 81445 10 + 376347 -AAGCCACAGC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218056 11 - 8137123 GGCGCCCTGGC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e saiBol1.JH378296 343440 0 - 2409723 C a score=19536.000000 s hg38.chr7_KI270899v1_alt 116635 3 + 190869 TCA s panTro5.chr7_NW_015973501v1_random 15209 3 - 19153 TCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 77688 3 - 432965 TCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 133646 3 + 85365473 TCA i nomLeu3.chr20 I 710 C 0 s rheMac8.chr3 33985431 3 + 185818997 TCA i rheMac8.chr3 C 0 I 963 s macFas5.chr3 33602000 3 + 192294377 TCA i macFas5.chr3 C 0 I 960 s macNem1.NW_012019910v1 4367850 3 - 9440265 TCA i macNem1.NW_012019910v1 C 0 I 963 s cerAty1.NW_012002954v1 16956254 3 - 21915920 TCA i cerAty1.NW_012002954v1 C 0 I 1000 s manLeu1.NW_012101810v1 116606 3 - 2515279 TCA i manLeu1.NW_012101810v1 C 0 I 1026 s calJac3.chrUn_GL286444 3725 3 + 138751 TCA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 482898 3 - 2125214 TCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 81455 3 + 376347 TCA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218067 3 - 8137123 TCC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e saiBol1.JH378296 343440 0 - 2409723 C a score=662865.000000 s hg38.chr7_KI270899v1_alt 116638 352 + 190869 GCTCCCACTGTCAGGTGTGTCCTCCGGTGGGAAGGGGCAGGCGCAGGCGGGAACAGCCCCTGCTAGCTGGGGTTCAGCAGGGCCATGCTGTGCAGGGATGGGGACTCCTGGCTCAGGGACCTGCTTCCCGGGTCCTACACGGGCTTTATGCTAGTTTATAATATGACTTGGGGCAGCCGCCCC-----CCCGAGGCTGGGAGGAGGCCTCAGGAGATGGGGATCACTGGTGATGCCCGGAGGAGGCAGCTTGCAAGAGAGTGGGCTCAGCAGCGTGG-------------------GAAAAGAGGGGCCAGGGTGTCCTTCAGC-TAAATGAGCTGCTTTTTCCCAGGGCAGCAATGGTGCAGCCTTTGGCACCCAG s panTro5.chr7_NW_015973501v1_random 15212 352 - 19153 GGTCCCACTGTCAGGTGTGTCCTCCGGTGGGAAGGGGCAGGTGCAGGCGGGAACAGCCCCTGCTAGCTGGGGTTCAGCAGGGCCATGCTGTGCAGGGATGGGGACTCCTGGCTCAGGGACCTGCTTCCTGGGTCCTACACAGGCTTTGTGCTAGTTTATAATATGACTTGGGGCAGACACCCC-----CCTGAGGCTGGGAGGAGGCCTCAGGAGATGGGGATCACTGGTGATGCCCGGAGGAGGCAGCTTGCGAGAGAGTAGGCTCAGCAGCGTGG-------------------GAAAAGAGGGGCCAGGGTGTCCTTCAGC-TAAATGAGCTGCTTTTTCCCAGGGCAGCAGTGGTGCAGCCTTTGGCACCCAG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 77691 352 - 432965 GGTCCCACTGTCAGGTGTGTCCTCCGGTGGGAAGGGGCAGGCGCAGGCGGGAACAGCCCCTCCTAGCTGGGGTTCAGCAGGGCCATGCTGTGCAGGGATGGGGACTCCTGGCTCAGGGACCTGCTTCCTGGGTCCTGCACAGGCTTTGTGCTAGTTTATAATGTGACTTGGGGCAGCCGCCCC-----CCTGCGGCTGGGAGGAGGCCACAGGAGATGGGGATCACTGATGATGCCCGGAGGAGGCAGCTTGCAAGAGAGTGGGCTCAGCAGCGTGG-------------------GAAAAGAGGGGCCAGGGTGTCCTTCAGC-TAAACGAGCTGCTTTTTCCCAGGGCAGCAATGGTGCAGCCTTTGGCACCCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 133649 353 + 85365473 GGTCCCACTGTCAGGTGTGTCCTCCGGTGGGAAGGGGCAGGCGCAGGCGGGAACAGCCCCTCCTAGCTGGGGTTCAGCATGGCCATGCTGTGCAGGGATGGGGACTCCTGGCTCAGGGACCTGCTTCCTGGGTCCTGCACAGGCTCTGTGCTAGTTTATAATGTGACTTGGGGCAGCCACCCC-----CCTGAGGCTGGGAGGAGGCCCTGGGAGACGGGGGTCACTGGTGATGCCCGGAGGAGGCAGCTTGTGAGAGAGTGGGCTCAACAGCGTGG-------------------GAAAAGAGGGGCCAGGGTGTCCTTCAGCATGAATGAGCTGCTTTTCCCCAGGGCAGCAATGGTGCAGCCTTTGGCACCCAG i nomLeu3.chr20 C 0 M 273 s calJac3.chrUn_GL286444 3728 349 + 138751 GATTCCATTGGCAGGTGTGTCCTCCCGTGGGAAGGGGCAGGCTCAGGCAGAAACAGCCCCTCCTAGCTGGGATTCAGCAGGGCCATGCTGTGCAGGAATGGGGACTCCGGGCTCAGTGATCTGCTTCCTGGGTCCTACGCAGGCTTCATGCTAGTTTATAATGTGACTTGGGGCAGCCACCCC-----C--GAGGCTGGGAGGAGCCTTTGGGAGACGGGG-TCACTGGTGTTGCCTGGAGGATGCAACCTGTGATGACATGGGTTCAACAGGGCAG-------------------GAAAAGAGGAGCCAGAGTGTCCTTTAGC-TGAATGAGCTGCTTTTTCCCAGGGCAGCAATGGTGCAGCCTTTGGCATCCAG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 482901 350 - 2125214 GATCCCATTGGCAGGTGTGTCCTCCCGTGGGAAGGGGCAGGCTCAGGCGGGAACAGCCCCTCCTAGCTGGGGTTCAGCAGGGCTGTGCTGTGCAGGAATGGGGACTTCGGGCTCAGGGACCTGCTTCCTGGGTCCTACACAGGCTTTGTGCTAGTTTATAATGTGACTTGGGGCAGCCACCCC-----CGTGAGGCTGGGAGGAGCCTTTGGGAGATGGGG-TCACTGGTGATGCCTGAAGGATGCAGCCTGTGACAGCGTGGGTTCAGCAGGGTA--------------------GAAAAGAGGAGCCAGGGTGTCCTTCAGC-TGAATGAGCTGCTTTTTCCCAGGGCAGCACTGGTGCAGCCTTTGGCATCCAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 81458 351 + 376347 GATCCCATTGGCAGGTGTGTCCTCCCGTGGGGAGGGGCAGGCTCAGGCGGGAGCAGCCCCTCCTAGCTGGGGTTCAGCAGGGCCGTGCTGTGCAGGAATGGGGACTCCAGGCTCAAGGACCTGCTTCCTGGGTCCTACGCAGGCTTCGTGCTAGTTTATAATGTGACTTGGGGCAGCCACCCC-----CCTGAGGCTGGGAGGAGCCTTTGGGAGATGGGT-TCACTGATGATGCCTGGAGGATGCAGCCTGTGAGAGCATGAGTTCAACAGGGCAG-------------------GAAAAGAGGAGCCAGGGTGTCCTTCAGC-TGAATGAGCTGCTTTTTCCCAGGGCAGCAATGGTGCAGCCTTTGGCATCCAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218070 358 - 8137123 TACCACACTGCTGTGTGTGTCCTCTGCTGGGAAGGAGATGGCA-GGGCAGGCACAGCCTTGCACAGCTGGGGTTCAGCTGCACGGAGCTGCACAGGGAAGGGGGCTCCAGGCTCAAGGGCCAGCGTTCTGGGTCCTGTGCGGGC----------TTTATCATGTGCCTTGAGGGAGCCAGCCTAGGTGTCTGAGTCTGAGAGGTTGCCTCACGAGACAAGAGTGCC--ATGATGACCAGAGGGTGCAGAGCATGAGAGGGTGAGTCTGACAGTGTGGCACACAGGACGGTAGGGCTGATCAGTGTGCCCAGGGCATTCTTGGG--TGGATGACCTGCCTCTGCCCAGGCTGG----AGGGAGACCTCAGAGAAGTGG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C a score=136566.000000 s hg38.chr7_KI270899v1_alt 116990 134 + 190869 CTTCTCACTGTTGGCACCAAGAGAGCCTCTGGGCAGTGCGGGCTGGTCCAGTAAAGACAGGGGCCTCAGCTCTGGGGCTCAGCAGGCCTCTGCTCTTAGCCCCACGCCTGGAATATGAGCTTCCCATGCCTGCC s panTro5.chr7_NW_015973501v1_random 15564 133 - 19153 CTTCTCACTGTTGGCACCAAGAGAGCCTCTGGGCAGTGCGGGCTGGTCCA-TAAAGACAGGGGCCTCAGCTCTGGGGCTCAGCAGGCCTCCGCTCTTAGCCCCATGCCTGGAATATGAGCTTCCCATGCCTGCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 78043 133 - 432965 CTTCTCACTGTCGGCACCAAGAGAGCCTCTGGGCAGTGTGGGCTGGTCCAGTAAAGACAGGGGCCTCAGCTCTGGGGCTCAGCAGGCCTCC-CTCTTAGCCCCACGCCTGGAATATGAGCTTCCCATGCCTGCC i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 4077 121 + 138751 CTTCTTACTGTCAGCACTGAGAGAGCCTCTGGAGGTGCCAGGCTGCTCCGGT--AGACAGGGGCCTCAGCCCCAGGGCTCAGCAGGCCT-----------TCCATGCCTGGAAGAGGAGCTTCCCACACTCACC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 483251 130 - 2125214 CTTCTCGCTGTCAGCACTGAAAGAGCCTCTGGACAGTGTAGGCTGGTCCAGT--AGACAGGGGCCTCACCCCTGGGGCTCAGCAAGCCTCC-CTTTTAG-CCCATGCCTGGAAGAGGAGCTTCCCTTGCCTGCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 81809 130 + 376347 CTTCTTGCTGTCAGCACTGCGAGAGCCTCTGGACAGTGTGGGCTGCTCCAGT--AGACAGGGGCCTCA-CCCCGGGGCTCAGCAGGCCTCG-CTTTTAGCCCCATGCCTGGAAGAGGAGCTTCCCACGCCTGCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218428 95 - 8137123 ---------------------------CTTAGGTAGCTGGAGCCGGCCCAGACCAGACTGTGACCTCAGCCCTAGGGCT----GGGCCTCC-CTCTCAGCCCAA-------AGGATGACTGTCCCCCACCCCAC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e canFam3.chr6 61015380 2001 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 134002 273 + 85365473 M a score=91482.000000 s hg38.chr7_KI270899v1_alt 117124 80 + 190869 CCTTGAGGTCCAAGGTCAAAGTCAAGGTCAGCCTGCAGACGGTTGGGCTCGGGCTTGCTGGTGATCCTT------------TCTCACTGGCC s panTro5.chr7_NW_015973501v1_random 15697 80 - 19153 CCTTGAGGTCCAAGGTCAAAGTCAAGGTCAGCCTGCAGACGGTTGGGCTCAGGCTTGCTGGTGATCCTT------------TCTCACTGGCC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 78176 80 - 432965 CCTTGAGGTCCAAGGTCAAAGTCAAGGTCAGCCTGCAGACGGTTGGGCTCAGGCTCGCTGGTGATCCTT------------TCTCACTGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 4198 92 + 138751 CCTTAAGGTCCAAGGTCAAAGTCAAGGTCAGCCTGCAGGTGGTTGGGCTTAGGCTCACTGGCAATCCTTCCTCCCCAACTTGCTCACTGGCC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 483381 92 - 2125214 CCTTGAGGTCCAAGGTCAAAGTCAAGGTCAGCCTGCAGGCGGTTGGGCTTGGACTCACTGGCAATCCTTCCTCCCCAACTTGCTCACTGGCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 81939 63 + 376347 CCTTGAGATCCAAGGTCAAAGTCAAGGTCAGCTTGCAGGCAGTTGGGGTTAG-----------------------------GCTCACTGGCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218523 63 - 8137123 GCT-----CCCACCCCCGTCCCTGAGGTCAGCCTGTAG------GGCTTCAG------TGGTGCACCTT------------CCTCCCTAACC i otoGar3.GL873611 C 0 I 31 s canFam3.chr6 61017381 69 - 77573801 CCCTGAGGT-CAAGGTCATTGTGAAGAT--GCCTGTGAACAG--GGGCTCAGGCCT-----CGATGCT-------------GCTTGCTGGCC i canFam3.chr6 I 2001 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 134002 273 + 85365473 M a score=57653.000000 s hg38.chr7_KI270899v1_alt 117204 51 + 190869 ACAGGGGAAATAAACGCTGAG-GATAGGGCTGCTGTTCCCACTCACACA--CCG- s panTro5.chr7_NW_015973501v1_random 15777 51 - 19153 ACAGGGGAAATAAATGCTGAG-GATAGGGCTGCTGTTCCCACTCACACA--CCG- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 78256 51 - 432965 ACAGGGGAAATAAACGCTGAG-GATAGGGCTGCTGTTCCCACTCACACA--CCG- i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 4290 52 + 138751 ACAGTAGAAATAAACACTGAG-GACAGGGCTGCCTTGCCCACTCACACAC-CCG- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 483473 51 - 2125214 ACAGTAGAAATAAACGCCGAG-GACAGGGCTGACATGCCCACTCAAACA--CCA- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 82002 51 + 376347 ACAGTAGAAATAAACACTGAG-GACAGGGCTGCTGTGCCCACTCACACA--CCA- i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61017450 54 - 77573801 -AGATGCAAATGGATACAGGGTGGAAATGCTGCTGCGTCCATGCACACGAGCCGG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C e nomLeu3.chr20 134002 273 + 85365473 M a score=669553.000000 s hg38.chr7_KI270899v1_alt 117255 400 + 190869 GGGCCATCAGGCCTCCCAGGGGAGACACTGGCAAGAGCGGATGTGATTCTGGGAGAAATCCCTCTGATATCCAGTTCTCGCCTTGCACAAAATAAGGGAAATTAAAGGTTTCAATAGTACTGATTAGACGAGAGTTCTGCACGGCTGACTGTGGTGAGAACATTCCCATGTAAGCTGGCTGC--------------TCTGTTTTCCAGGCCTGATGC-GATCATTTGTGCAGAACCGCCTTTAATATTAATGCTGGCGG--TGGGCCCCGTGgcctctctgactctgcctccctggcccctccaccctgTGCTGGCATCCACCGAGGTCTGCATCCTGCATGTGTGGGCCACTGTCCCAGGGGTGGGCTTCGAAGAGACCCTGCTCCCCTCCAGGCTCCTGGCAGAGTGCATTGGTA s panTro5.chr7_NW_015973501v1_random 15828 400 - 19153 GGGCCATCAGGCCTCCCAGGGGAGACACTGGCAAGAGCGGATGTGATTCTGGGAGAAATCCCTCTGATATCCAGTTCTGGCCTTGCACAAAATAAGGGAAATTAAAGGTTTCAATAGTACTGATTAGACGAGAGTTCTGCACGGCTGACTGTGGTGAGAACATTCCCATGTAAGCTGGCTGC--------------TCTGTTTTCCAGGCCTGATGC-GATCATTTGTGCAGAACCGCCTTTAATATTAATACTGGCGG--TGGGCCCCGTGgcctctctgactctgcctccctggcccctccaccctgTGCTGGCATCCACCAAGGTCTGCATCCTGCATGTGTGGGCCACTGTCCCAGGGGTGGGCTTCGAAGAGACCCTGCTCCCCTCCAGGCTCCTGGCAGAGTGCATTGGTA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 78307 400 - 432965 GGGCCATCAGGCCTCCCAGGGGAGACACTGGCAAGAGCGGATGTGATTCTGGGAGAAATCCCTCTGATATTCAGTTCTCGCCTTGCACAAAATAAGGGAAATTAAAGGTTTCAATAGTACTGATTAGACGAGAGTTCTGCACGGCTGACTGTGGTGAGAACATTCCCATGTAAGCTGGCTGC--------------TCTGTTTTCCAGGCCTGATGC-GATCATTTGTGCAGAACCGCCTTTAATATTAATGCTGGCGG--TGGGCCCGGTGGCCTCTCTGACTCCGCCTCTCTGGCCCCTCCACCCTGTGCTGGCATCCACCAAGGTCTGCATCCTGCATGTGTGGGCCACTGTCCCAGGGGTGGGCTTCGAAGAGACCCTGCTCCCCTCCAGGCTCCTGGCAGAGTGCATTGGTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 134275 397 + 85365473 GGGCCATCAGGCCTCCCAGGGGAGCCACTGGCAAGAGCGGATGTGATTCTGGGAGAAATCGCTCTGATATCCAGTTCTTGTCTTGCACAAAATAAGGGAAATTAAAGGTTTCAATAGTACTGATTAGACGAGAGTTCTGCATGGCTGACTGTGGTGAGAACATTCCCACGTAAGCTGGCTGC--------------TCTGTTTTCCAGGCCTGACGC-GATCATTTGTGCAGAACCGCCTTTAA---TAATGCTGGCGG--CGGGCCCCGTGGCCTCTCTGACTCTGCTTCCCTGGCTGCTCCACCCTGTGCTGGCATCCGCCAATGTCTGCACCCTGCATGTGTGGGCCACTGTCCCAGGGGTGGGCTCCGAAGAGACCCTGCTTCCCTCCAGGCTCCTGGCAGAGTGCATTGGTA i nomLeu3.chr20 M 273 C 0 s calJac3.chrUn_GL286444 4342 366 + 138751 GGGCTGTCAGGCCTCCTAGGGGAGCCACTGGCAAGAGCGGATGTGATTCTGGGAGGAATCCCTCCAATATCCAGTTCTCACCTCACACAAAGTGAAGAAAATTAAAGGTTTCAATAGTACTGATTAGCCTGGAGTTCTGCAAGACTGA------------------------------CTGC--------------TCTGTTTTCCAGGCCTGTCGT-GATGATTTGCGCACAACCGCCTGTAACATTAATTCTGGTAG--CAGGCCCCACAGCCTCTCTGACT--GCCTTCCTGGCCCCTCCACCCTGTGCTGGCATCCACCAAGGTCTGTACCCTGCACATG-AGGCCAATGTCCCA-GAGTGGACTTTGAAGAGACACTCCTCCCCTCCAGGCTCCTGGCAGAGTGCACTGGTA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 483524 396 - 2125214 GGGCTGTCAGGCCTCCCAGGGGAGCCACTGGCAAGAGCGGATGTGATTCTGGGAGGAATCCCTCTGATATCCAGTTCTCACCTTGCACAAAGTAAGGAAAATTAAAGGTTTCAATAGTACCGATTAGCTGAGAGTTCTGCAAGACTGACTCTGGTGGGAACATTCCCACATAAGCAGGCTGC--------------TCTGTTTTCCAGGCCTGATGC-GATCATTTGTGCACAACTGCCTGTAATATTAATGCTGGCAG--CAGGCCCCGCAGCCTCTCTGACT--GCCTTCCTGGCCCCTCCATCCTGTGCTGGCATCCACCAAGGTGTATACCCTGTACATG-AGGCCACTGTCCCA-GAGTGGACTTTGAAGAGACCCTCCTCCCCTCGAGGCTCCTGGCAGAGTGCACTGGTA i cebCap1.NW_016107703v1 C 0 I 310 s aotNan1.NW_018514293v1 82053 395 + 376347 GGGCTGTCAGGGCTGTCAGGGGAGCCACTGGCAAGAGTGGATGTGATTCTGGGAGGAATCCCTCTGATATCCAGTTCTCACCTCGCACAAAGTGAGGAAAATTGAAGGTTTCGATGGTACTGATTAGCTGAGAGTTCTGCGAGACTGACTCTGGCGGGAACATTCCCACATACGCAGGCTGC--------------TCTGTTTTCCAGGCCTGACGC-GATCATTTGTGCACAACCGCCTGTAACGTTAACGCTGG-AG--CAGGCCCCGCAGCCTCTCTGACT--GCCTTCCTGGCCCCTCCGCCCTGTGCCGGCATCCACCAAGGTCTGTACCCTGCACATG-AGGCCGCTGTCCCA-GAGTGGACTTAGAAGAGACCCTCCTCCCCTCCAGGCTCCTGGCAGAGGGCACTGGCA i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61017504 328 - 77573801 AGATGATCCAGGCGCCCTGAGGGAGCCCTGACAAGAGGG----------------------------------------------CATAAAATGAGGAAAACTAAAGGAGTAGATAATACTG---AGAAGAGACTTCTGCGGGGCCAATGGTGAAGGGAACATTCTTGTATAATCACGGTGCAAGAGAAAACCAGTCTCATTTTCCAGGCCTGATGCTTGGCATTTATACAGAACTGGCTTTTGTATCAACACAGGTGGGCCAGAGCCTGGAGGCCCCTTGACA-------TTTGCCACCTCTCCTGTGTGCTGGCGCCC-------------CTCTACCCAGGTGGGCTGTTGTCTA--GGGT------------GACCCTGCT-CTCTCCAGGTTCCTGGGACAGTGTGC----- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C a score=4114.000000 s hg38.chr7_KI270899v1_alt 117655 3 + 190869 ACC s panTro5.chr7_NW_015973501v1_random 16228 3 - 19153 ACC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 78707 3 - 432965 ACC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 134672 3 + 85365473 ACC i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 4708 3 + 138751 GCC i calJac3.chrUn_GL286444 C 0 C 0 s aotNan1.NW_018514293v1 82448 3 + 376347 ACC i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61017832 3 - 77573801 GCT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C e cebCap1.NW_016107703v1 483920 310 - 2125214 I a score=5573.000000 s hg38.chr7_KI270899v1_alt 117658 4 + 190869 CCTC- s panTro5.chr7_NW_015973501v1_random 16231 4 - 19153 CCTC- i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 78710 4 - 432965 CCTC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 134675 4 + 85365473 CCTC- i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 4711 4 + 138751 CCCC- i calJac3.chrUn_GL286444 C 0 I 280 s cebCap1.NW_016107703v1 484230 4 - 2125214 CCTC- i cebCap1.NW_016107703v1 I 310 C 0 s aotNan1.NW_018514293v1 82451 4 + 376347 CCtc- i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61017835 4 - 77573801 -CCCA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C a score=3090.000000 s hg38.chr7_KI270899v1_alt 117662 2 + 190869 TT s panTro5.chr7_NW_015973501v1_random 16235 2 - 19153 TT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 78714 2 - 432965 TT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 134679 2 + 85365473 TT i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 484234 2 - 2125214 TT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 82455 2 + 376347 tt i aotNan1.NW_018514293v1 C 0 I 1378 s canFam3.chr6 61017839 2 - 77573801 CT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343440 0 - 2409723 C e calJac3.chrUn_GL286444 4715 280 + 138751 I a score=122222.000000 s hg38.chr7_KI270899v1_alt 117664 155 + 190869 AAAGAGACACGGTGGAAAGAGGGCCTCCACCCTCCTGGACATCAGGACGAGACGTAAAGTCTCCGTGCTCCTTCAGCTGCACGCAGATCGtcactttgcagatgtgaaaactgaggcccagagggagaagggggctgtcaaagatcacatgagga s panTro5.chr7_NW_015973501v1_random 16237 155 - 19153 AAAGAGACACGGTGGAAAGAGGGCCTCCACCCTCCTGGACATCAGGACAAGACGTAAAGTCTCCGTGCTCCTTCTGCTGCACGCAGATCGtcactttgcagatgtgaaaactgaggcccagagggagaagggggctgtcaaagatcacatgagga i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 78716 154 - 432965 AAAGAGACACGGTGGAAAGAGGGCCTCCACCCT-CTGGACATCAGGACGAGACGTAAAGTCTCCGTGCTCCCTCAGCTGCATGCAGATCGtcactttgcagatgtgaaaactgaggcccagagggagaagggggctgtcaaagatcacatgagga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 134681 135 + 85365473 AAAGAGACGTGGTGGTAAGTGGGCCTCCACCCTCCTGGACATCAGGATGAGACGTAAAGTCTCTGTGCTCCCTCTGCTG--------------------agatgtgaaaactgaggcccagacggaaaagggggctgtcgaagatcacatgagga i nomLeu3.chr20 C 0 C 0 s cebCap1.NW_016107703v1 484236 153 - 2125214 ACAAAGACATGGTGGTAAGTGGGCTTCTACCCTCCTGG--ATCAGGACGAAACATAATGTCTCCATGCCCCCTCATTTGCACCCAGAGcctcactttgcagatgtgaaaactgaggcccagagggagacaggggctgtcgaagatcacgtgagga i cebCap1.NW_016107703v1 C 0 I 4 s canFam3.chr6 61017841 133 - 77573801 TCAGaggtactgtggtaagtggggtgccacctcatttg--gtcagaat-agcagcagggtctctgtggcct----------------tctccagtttgccattgtgaaaaccgag--tcagagcgaggaaggcgctggccagggtcacacagGT- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e saiBol1.JH378296 343440 0 - 2409723 C e calJac3.chrUn_GL286444 4715 280 + 138751 I a score=206689.000000 s hg38.chr7_KI270899v1_alt 117819 160 + 190869 gcctcacgcagggccaggactgcaacccttttctctaaacatacttttaaattaaagtgtgtggcatacccagggattataaaacacagatattataaatgtagagcttcataaactgaaaacactggtgtaagccatactcagatcaagaaataaaaag s panTro5.chr7_NW_015973501v1_random 16392 160 - 19153 gcctcacacagggccaggactgcaacccttttctctaaacatacttttaaattaaagtgtgtggcatacccagggattataaaacacagatattataaatgtagagcttcataaactgaaaacactggtgtaagccattatcagatcaagaaataaaaag i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 78870 160 - 432965 gcctcacgcagggtcaggactgcaacccTTTTCTCTAAACACACTTTTAAATTAAAGTGTGTGGCATACCCAGGGATTGTAAAACACAGGTattataaatgtagagcttcataaactgaaaacactggtgcaagccatactcagatcaagaaataaaaag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 134816 160 + 85365473 gcctcaagcagggccaggactgcaacccttttctctaaacatacttttaaattaaagtgtgtggcatacccagagattataaaacaaagatattataagtgtagagcttcataaactgaaaacactggtgtaagccacactcagatcaagaaataaaaag i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378296 343440 155 - 2409723 GCCCCACACAGAGCCA-GACTGCAATCCttttctc----tatacttttaaattaaagcatatgggatacacagagattacaatacacagatattataaacttagagcttcataaactgaaaacactggtgtaagccacataaagatcaagaaataaaaag i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 484393 159 - 2125214 gcctcacacagagcca-gactgcaactcttttctctaaatatacttttaaattaaagcatatgggatacacagagattacaatacacagatattgtaaactcagagcttcataaactgaaaacatttgtgtaagccacattcagatcaagaaataaaaag i cebCap1.NW_016107703v1 I 4 C 0 s canFam3.chr6 61017974 123 - 77573801 GCCTCGCACAG-GCAGGGACTGTGAGTGCCTTTTC---ATTTTTTTCCCAAGTGCAGTTT-----------------------ACATAGATA----------AAAGCTTCATAAACTGAAAACACTTGTGTACTTCACACTCAGATCAAGAAATAAAAAG i canFam3.chr6 C 0 I 443 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e calJac3.chrUn_GL286444 4715 280 + 138751 I a score=103402.000000 s hg38.chr7_KI270899v1_alt 117979 82 + 190869 ctacaggcccctggaagtccctcaagtgcctcttctcatcaacattccccaaagaataaccactgtccccacttctgagaac s panTro5.chr7_NW_015973501v1_random 16552 82 - 19153 ctacaggcccctggaagtccctcaagtgcctcttctcatcaccattccccaaagaataaccactgtccccacttctgagaac i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79030 82 - 432965 ctacaggcccctggaagtccctcaagtgcctcttctcatcaccattccccaaagaataaccactgtccccacttctgagaac i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 134976 82 + 85365473 ctacaggcccctggaagtccctcaggtgcctcttctcatcaccattccccaaaggataaccactgtccccacttccgagaac i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378296 343595 82 - 2409723 ttacagacacctggaagtccttcaggtgcctcttctcatcaccgtttcccgaagaataaccactgtccccaattctgaaaat i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 484552 82 - 2125214 ttacagacacctggaactccttcaagtgcctcttctcatcaccatttcccaaagaataaccactgtccccacttctgaaaac i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e calJac3.chrUn_GL286444 4715 280 + 138751 I a score=87362.000000 s hg38.chr7_KI270899v1_alt 118061 97 + 190869 atGACATCATGAATTCTGACA---------------------------------------------TCAGGGCTC-TGGCATCATGGCTCTTGACCTCATGACATCGTAACTTCCTACATCACGACATCATAACTTCCTACAT s panTro5.chr7_NW_015973501v1_random 16634 97 - 19153 atGACATCATGAATTCTGACA---------------------------------------------TCGGGGCTC-TGGCATCATGGCTCTTGACCTCATGACATCGTAACTTCCTACATCACGACATCATAACTTCCTACAT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79112 60 - 432965 atgacatcacgaattctgaca---------------------------------------------tcagggctc-ttg-------------------------------------acatcatgacatcataacttcctacat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135058 74 + 85365473 aCGACATCATGAATTCTGACA---------------------------------------------TCAGGGCTC-TGGCATCATGGCTCTTG-----------------------ACATCATGACATCATAACTTCCTGCAT i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 4995 98 + 138751 ATGATATCATGACTCCTAACA---------------------------------------------TTAGGGCTTCTGGCATCACGGCTCTTGACATCATGACATAATAACTTCTGACATCATGACATCGTAACTTCCTACAT i calJac3.chrUn_GL286444 I 280 C 0 s saiBol1.JH378296 343677 87 - 2409723 atGACATAATGACTTCTGACA-------------------------------------------------------TGACATCACAACTTCTGACATCATGGC-TCATGACATCTTAACTTATGACGTCATGACTCCTGACAT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 484634 143 - 2125214 atGACATCATGACTTCTGACATCATGGCTCATGACATCATAACTTATGATGTCATGACTCCTGACATCAGGGCTTCTGGCATCATGGCTCTTGACATCATGACTTAATAACTTCTGACATCATGACATCATAACTTTCTACAT i cebCap1.NW_016107703v1 C 0 I 479 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I a score=1795.000000 s hg38.chr7_KI270899v1_alt 118158 2 + 190869 AA s panTro5.chr7_NW_015973501v1_random 16731 2 - 19153 CA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79172 2 - 432965 ca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135132 2 + 85365473 CA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 5093 2 + 138751 CA i calJac3.chrUn_GL286444 C 0 I 125 s saiBol1.JH378296 343764 2 - 2409723 CA i saiBol1.JH378296 C 0 I 7 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e cebCap1.NW_016107703v1 484777 479 - 2125214 I a score=207.000000 s hg38.chr7_KI270899v1_alt 118160 1 + 190869 C s panTro5.chr7_NW_015973501v1_random 16733 1 - 19153 C i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79174 1 - 432965 c i gorGor5.CYUI01015914v1 C 0 C 0 s saiBol1.JH378296 343773 1 - 2409723 T i saiBol1.JH378296 I 7 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e cebCap1.NW_016107703v1 484777 479 - 2125214 I e calJac3.chrUn_GL286444 5095 125 + 138751 I e nomLeu3.chr20 135134 0 + 85365473 C a score=14182.000000 s hg38.chr7_KI270899v1_alt 118161 25 + 190869 GACATTGTAACTTCCTACATCATAA s panTro5.chr7_NW_015973501v1_random 16734 25 - 19153 GACATCGTAACTTCCTACATCATAA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79175 25 - 432965 gacatcgtaacttcctacatcataa i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 5220 25 + 138751 TACATTATGGTTCCTGACATCATGG i calJac3.chrUn_GL286444 I 125 C 0 s saiBol1.JH378296 343774 25 - 2409723 GGCATCATGGCTCTTGACATCATGA i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e cebCap1.NW_016107703v1 484777 479 - 2125214 I e nomLeu3.chr20 135134 0 + 85365473 C a score=54417.000000 s hg38.chr7_KI270899v1_alt 118186 50 + 190869 CT-------TCTGACATCA-------CGACATCGTAACTTCTGACATCATGACTTCTGACATCA s panTro5.chr7_NW_015973501v1_random 16759 50 - 19153 CT-------TCTGACATCA-------CGACATCGTAACTTCTGACATCATGACTTCTGACATCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79200 50 - 432965 ct-------tctgacatca-------cgacatcgtaacttctgacatcatgactTCTGACATCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135134 30 + 85365473 ----------------------------------TAACTTCTGACATCATGACTTCTGGCGTCA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 5245 57 + 138751 CT-------TCTGATATCACGACCTCTGGCATCAGGCCTTCTGACAGGATGATTCCTGACATCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 343799 57 - 2409723 CTTAATAACTCTGACATCA-------TGACATCATAACTTTCTACATCATGGCTCCTGGCATCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 485256 50 - 2125214 CT-------TCTGGCATCA-------TGACATCATAACTTCTGACATCATGGCTCATGACATCA i cebCap1.NW_016107703v1 I 479 I 85 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I a score=59595.000000 s hg38.chr7_KI270899v1_alt 118236 64 + 190869 -GGT-------CTTGAGGCATCATGGCTTCTGGCACCATAA--------CCTCTGAGATCAGAGCTT-TGGCATTATGACA s panTro5.chr7_NW_015973501v1_random 16809 64 - 19153 -GGT-------CTTGAGGCATCATGGCTTCTGGCACCATAA--------CCTCTGAGATCAGAGTTT-TGGCATTATGACA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79250 64 - 432965 -GGT-------CTTGAGGCATCATGGCTTCTAGCACCATAA--------CCTCTGAGATCAGAGCTT-TGGCATTATTACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135164 64 + 85365473 -GGT-------CTTGAGGCATCGTGGCTTCTGGCACCATAA--------CCTCTGAGATCAGAGCTT-TGGCATTATGACA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 5302 80 + 138751 TGGCACCATAACTTCTGACATAATGGCTTTTAGCACCATGGCTTCATAACTTCTGAGATCAGAGCTT-TGGCATTATGACA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 343856 64 - 2409723 TGAC---------TCTGACATCGTGGCTCCTGGCATCATGG--------CTCCTGATATCAGGACTTCTGGCATCATGTCA i saiBol1.JH378296 C 0 I 580 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e cebCap1.NW_016107703v1 485306 85 - 2125214 I a score=5484.000000 s hg38.chr7_KI270899v1_alt 118300 7 + 190869 TTATAAC s panTro5.chr7_NW_015973501v1_random 16873 7 - 19153 TTATAAC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79314 7 - 432965 TTATAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135228 7 + 85365473 TTATAAC i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 5382 7 + 138751 TCACAAC i calJac3.chrUn_GL286444 C 0 I 132 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e saiBol1.JH378296 343920 580 - 2409723 I e cebCap1.NW_016107703v1 485306 85 - 2125214 I a score=100318.000000 s hg38.chr7_KI270899v1_alt 118307 211 + 190869 Atcttttttttttttttttttttttttgagacagaatctggctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccagattcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccactgtgcccggctgatttttttgtatttttagtagagatggggtttcact s panTro5.chr7_NW_015973501v1_random 16880 208 - 19153 ATCttttttttttttttttttttt---gagacagaatctggctctgtcacccaggctggagtgcagtggcacgatctcggctcactgcaagctccgcctcccagattcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccatgcccggctgatttttttgtatttttagtagagatggggtttcact i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79321 205 - 432965 ATCttttttttttttttttttt-----gagacagaatctggctctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctcagcctcccagattcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccactgcgcccggctaa-ttttttgtatttttaggagagatggggtttcact i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135235 198 + 85365473 ttcttttttttttt-------------gagacggagtctcgctctgtcgcccaggctggagtgcagtggcaccatctcgactctctgcaagctccgcctcccagattcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaatttttttgtatttttagtagagatggggtGACATT i nomLeu3.chr20 C 0 I 89 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e saiBol1.JH378296 343920 580 - 2409723 I e cebCap1.NW_016107703v1 485306 85 - 2125214 I e calJac3.chrUn_GL286444 5389 132 + 138751 I a score=24445.000000 s hg38.chr7_KI270899v1_alt 118518 89 + 190869 gtgttagccaggatggtcttgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacaggcgtgagccgcca s panTro5.chr7_NW_015973501v1_random 17088 89 - 19153 gtgttagccaggatggtcttgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacaggcatgagccacca i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79526 89 - 432965 gtgttagccaggatggtcttgatctcctgacctcgtgatccacccgtctcggcctcccaaagtgctgggattacaggcatgagccatcg i gorGor5.CYUI01015914v1 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e saiBol1.JH378296 343920 580 - 2409723 I e cebCap1.NW_016107703v1 485306 85 - 2125214 I e calJac3.chrUn_GL286444 5389 132 + 138751 I e nomLeu3.chr20 135433 89 + 85365473 I a score=2026.000000 s hg38.chr7_KI270899v1_alt 118607 10 + 190869 cgcccggccT s panTro5.chr7_NW_015973501v1_random 17177 10 - 19153 tgcccggccT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79615 10 - 432965 tgcccggccT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135522 10 + 85365473 CATCATGGCA i nomLeu3.chr20 I 89 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e saiBol1.JH378296 343920 580 - 2409723 I e cebCap1.NW_016107703v1 485306 85 - 2125214 I e calJac3.chrUn_GL286444 5389 132 + 138751 I a score=8725.000000 s hg38.chr7_KI270899v1_alt 118617 11 + 190869 CCATGATCTGT s panTro5.chr7_NW_015973501v1_random 17187 11 - 19153 CCATGATCTGT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79625 11 - 432965 CCATGATCTGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135532 11 + 85365473 CCATGACCTGT i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 5521 11 + 138751 CCATGACCCAT i calJac3.chrUn_GL286444 I 132 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e saiBol1.JH378296 343920 580 - 2409723 I e cebCap1.NW_016107703v1 485306 85 - 2125214 I a score=47646.000000 s hg38.chr7_KI270899v1_alt 118628 40 + 190869 TTTTaatggaatcacttggtgtgcattctttggcgtctga s panTro5.chr7_NW_015973501v1_random 17198 40 - 19153 TTTTaatggaatcacttggtgtgcattctttagcgtctga i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79636 40 - 432965 TTTTaatggaatcacatggtgtgcattctttggcgtctga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135543 40 + 85365473 TTTTaatggaatcacatggtgtgcattctttggcgtctga i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 5532 39 + 138751 -TTTaatggactcaaatggtgtacattctttggtgtctga i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 485391 40 - 2125214 TTTCaatggaatcacatgttgtgtattctttggtgtctga i cebCap1.NW_016107703v1 I 85 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e aotNan1.NW_018514293v1 82457 1378 + 376347 I e saiBol1.JH378296 343920 580 - 2409723 I a score=650229.000000 s hg38.chr7_KI270899v1_alt 118668 413 + 190869 tttctttcactcaacattgtgtttgtgagattcattcattcttctcatttactcccattgttgtatttgatggtgtgaccagaccacggtttatcca--------ttggtggacatgtgggttgtttccagtttggagactgtcatgaatagtgtcactctgcgtattgcacatgccttttggtgaacttgtttgtggatttttcttgggtatatacctaggagcagaattgttgagtcataggctaggcgtacatttagctttaacagatatgaagagacaattttcccaaatcattctacagcctcacagttcacatccactctgaccaacagaagc--agttttggttgatccacatctctgccaccacctgctattctc----aatcttctacctgtagtcattc---cattcattgtgcattata s panTro5.chr7_NW_015973501v1_random 17238 413 - 19153 tttctttcactcaacattgtgtttgtgagattaattcattcttctcatttactcccgttgttgtatttgatggtgtgaccagaccatggtttatcca--------ttggtggacatgtgggttgtttccagtttggagactgtcatgaatagtgtcactctgcgtattgcacatgccttttggtgaacttgtttgtggatttttcttggttatatacctaggagcagaattgttgagtcataggctaggcatacatttagctttaacagatatgaagagacaattttcccaaatcattctacagcctcacagttcacatccactctgaccaacagaagc--agttttggttgatccgcatctctgccaccacctgctattctc----aatcttctacctgtagtcattc---cgttcattgtgcattata i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 79676 413 - 432965 tttctttcactcaacattgtgtttgtgagattcattcattcttctcatttactcccattgttgtgtttgatggtgtgaccagaccacggtttatcca--------ttggtggacatgtgggttgtttccagtttggagactgtcatgaatagtgtcactctgcgtattgcacatgccttttggtgaacttgtttgcggatttttcttgattatatacctaggagcagaattgttgagtcataggctaggcatacatttagctttaacagatatgaagagacaattttcccaaatcattccacagcctcacagctcacatccgctctgaccaacagaggc--agttttggttggtccacatctctgccaccacctgctattctc----agtcttctacttgtagtcattc---cgttcattgtgcattata i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135583 416 + 85365473 tttctttcactcaacaccgtgtttgtgagactcattcattcttctcacttactcccattgttgtatttgatggtatgaccagaccacggttgatcca--------ttggtggacatgtgggttgtttccagtttggagactgtcatgactagtgtcactctgagcattgcacatgccttttggtgaacttgtttatggatttttcttggttatatacctaggggcagaatcgttgagtcataggctaggcgtacatttagctttaacagatacgaagaaacaattttcccaaatcattctacagcctcacagtttacatccactctgaccaacagaagc--agttttggtcactccacatctctgccaccacttgctgttctt----aatcttctatgtgtagtcattctgttgTTCATTGTGCATTATA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 5571 417 + 138751 tttctttcattcaacattgtgtttgtgagactcattcattcttatcatttattccca---ttgtatttgatggtatgaccacacca--gtttatccattctactcttggtggacatttgggttgtttccagtttggggaccatcatgaatagtatca--ctgagcattacacatgtcttttggtgaacttatatatggatttttcttgcttacatacctaggag---aattgttgagtcatagattaggcatacatttagctttaatagatatgatgaaaaaattttcccaaattattctacaggttcacaatttacatccactctgaccaacagaaactgagttttggtggctccacatctttgccatcatttgctattctctctcagtcattttcttgcagtcattc---tgttcattgtgcattata i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 485431 423 - 2125214 tttctttcactcaacattgtgtttgtgagactcattcattcttatcatttattcccattgttgtatttgatggtatgaccacacca--gtttatccattctactcttgttggacatttgggtcatttccagtttgaggactgtcatgaatagtatca--ctgagcattgcacatgtcttttggtgaacttatttatggatttttcttggttacatacccaggagaaaaattgttgagtcataggctaggcatacatttagttttaatagatatgacgaaaaaatgttcccatattactctacaggttcacaatttacatccactctgaccaatagaaaccgaattttggtggctccacatctttgccatcacttgctattctctctcagtcttttacttgcagccattc---tgttcactgtgcattata i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 83835 419 + 376347 Tttctttcactcaacattgtgtttgtgagactcattcattcttatcatttattcccattgctgtatttgatggtatgaccacacca--gtctatccgttctactcttggtggacatttgggtcatttccagtttggagactgtcatgaatagtgtca--ctgcgcattgcgcatgtcttttggtgaacttatttatggatttttcttggttacatacctaggag---aattgttgagtcataggctaggcatacatttagttttaatagataggacaaaaaaat-ttcccaaattattctacaggttcacaatttacatccactctgaccaacagaagccgagttctggtgtctccacatctttgctgtcacttgccattctctcttaatcttttacttgcagtcattc---tgttcactgtgcattata i aotNan1.NW_018514293v1 I 1378 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e canFam3.chr6 61018097 443 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343920 580 - 2409723 I a score=1004009.000000 s hg38.chr7_KI270899v1_alt 119081 591 + 190869 tta--------------ATTTTCC----TAGTTATTATCTGATTCACAGCAAatgcttagcttactaattattaggttttctgacattctaatttttgcattgaagtcacaaatttccatccagttacgtccttacctgtatcccTTCTGTACCCCTGAGTGCAAGCTCTGGGCCGGGCTCTGCCTGGGAGAGCTTCCCTGGGTGCCTGG-AGACCCTTGTCCCCCCAGAAACTGGGTCTTAGATCTGACAAGGAAGTGTGTCCCTCCCTGGGCCCAGCTCCCACTATAAAAGACGCAGGTGCCCATTCTGCCAGGGGCAGAGGGTTCCTCCCCGAGCCTGGGCTCCTGTGGGAGCCTGGGGACCCCTCTAACCTGCCACCATCCAGGGACACATCCCAACTCCACTGCCTGGCTCATGTGTCTGAGGAA-GGGAAACACTCTCGTTTCGAGGATCGCAGGGTCCACCCTGTTCTTGCTCTAGACTGGG------------AGTG-GGTGAACTGCCGAGACACCGGCCCCAGCTCTGCTCCTCAGCTAATCCACCCTCCCTGGACGTGTCCACCCTCTGCTGCCAAAACGCACAATAGCAGCACAG---CCTCTCTGTGGCACAGG s panTro5.chr7_NW_015973501v1_random 17651 579 - 19153 tta--------------ATTTTCC----TAGTTATTACCTGATTCACAGCAAATGCTTAGCTTACTAATTATTAGGTTTTCTGACATTCTAATTTTTGCATTGAAGTCACAAATTTCCATCCAGTTACGTCCTTACCTGTATCCCT-----------GAGTGCAAGCTCTGGGCCCGGCTCTGCCTGGGAGAGCTTCCCTGGGTGCCTGG-AGACCCCTGTCCCCC-AGAAACTGGGTCTTAGATCTGACAAGGAAGTGTGTCCCTCCCTGGGCCCAGCTCCCACTATAAAAGATGCAGGTGCCCATTCTGCCAGGGGCAGAGGGTTCCTCCCCGAGCCTGGGCTCCTGTGGGAGCCTGGGGACCCCTCTAACCTGCCACCATCCAGGGACACATCCCAACTCCACTGCCTGGCTCATGTGTCTGAGGAA-GGGAAACACTCTCGTTTCGAGGATCGCAGGGTCCACCCTGTTCTTGCTCTAGACTGGG------------AGTG-GGTGAACTGCTGAGGCACCGGCCCCAGCTCTGCTCCTCAGCTAATCCACCCTCCCTGGACGTGTCCACCCTCTGCTGCCAAAACGCACAATAGCAGCACAG---CCTCTCTGTGGCACAGG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 80089 593 - 432965 tta--------------ATTTTCCTAATTAGTTATTA-CTGATTCACAGCAAATGCTTAGCTTACTAATTATTAGGTTTTCTGACATTCTAATTTTTGCATTGAAGTCACAAATTTCCGTCCAGTTACGCCCTTACCTGTATCCCTTCTGTATCCCTGAGTGCAAGCTCTGGGCCCGGCTCTGCCTGGGAGAGCTT-CCTGGGTGCCTGG-AGACCCCTGTCCCCCCAGAAACTGGGCCTTAGATATGACAAGGAAGTGTGTCCCTCCCTGGGCCCAGCTCCCACTATAAAAGACGCAGGTGCCCATTCTGTCAGGGGCAGAGGGTTCCTCCCTGAGCCTGGGCTCCTGTGGGAGCCTGGGGACCCCTCTAACCTGCCACCATCCAGGGACACATCCCAACTCCACTGCCTGGCTCATGTGTCTGAGGAA-GCGAAACACTCTCATTTCCAGGATCGCAGGGTCCACCGTGTTCTTGCTCTAGACTGGG------------AGTG-GGTGAACTGCCGAGGCACCGGCCCCAGCTCTGCTCCTCAGCTAATCCACCCTCCCTGGACGTGTCCACCCTCTGCTGCCAAAACACACAATAGCAGCACAG---CCTCTCTGTGGCACAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 135999 596 + 85365473 TTA--------------ATTTTCCTAATTAGTTATTACCTGATTCACAGCAAATGCTTAGCTTACTAAGCATTAGGTATTCTGACATTCTAATTTTTGCACTGAAGTCACAAATTTCCATCCAATTACGGCCTTACCTGTATCCCTTCTGTATCCCTGCGTGCAAGCTCTGGGCCCGGCTCTGCCTGGGCGAGCTTCCCTGGGTGCCTGG-AGACCCCTCTCTCCCCGGAAACTGGGTCTTAGATCTGACAAGGAAGTGAGTCCCTCCCTGGGCCCAGCTCCCACTATAAAATGCGCAGGTGCCCATTCTGTCAGGGGCAGAGGATCCCTCCGCGAGCCTGGGCTCCTGTGGGAGCCTGGGGACCCCCCTAACCTGCCACCATCCAGGGACACATCCCAACTCCACTGCCTGGCTCATGAGTCTGAGGAA-GGGAAACA--CTCGTTTCGAGGATCACAGGGTCCACCCTGTTCTTGCTCTAGACCGGG------------AGTG-GGTGAACTGCCGAAGCACCAGCCCCAGCTCTGCTCCTCAGCTAATCCACCCTCCCTGGACGTGTCCACCCTCTGCTGCCAAAACGCACGATAGCAACACAACTCCCTCTCTGTGGCACAGG i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 5988 603 + 138751 ttatagtgttaatttttgttttcctaatgagtaatTACCTGATTCACAGCAAatgcttagtttactgattattaggttttctgacattctaatttttgcactgaagtcacaaatttccatctagttatagccttacctgtatcccTTCTGTATCCTTGAGTGCAAGTTCTGAGCCCGGGTCTGCCTGGGAGAGCTT-CCTGGGTGCCTGG-AGACCCCTCTGCC-------CCCGGGTCTTAGATCTGACAAAGAAGTGTGTCCCTCCCTGGGTCCAGTCTATGTTGTAAGAGGTGAAGATGTTCATTTTGTCAGGGGCAGAGAGTTCCTCCCTGAGCCTGGGCTCCTATGGGAGCCTAGGGACCCATCTAACCTGCCACCATCT-GGGATGCATCCCAACTCCATTGCCTGGCTCATGCATCTGAGAAA-GGGAAATACTCTTGTTTCAAGGATCACAGGGTCCACCCCGTTCTTGCTCCAGACTGGG------------AGTG-GGTGAGTTGCGGAGGTGCCAGCCCCAGCTCTGCTCCTCAGCTAATCCAGCATCCCTGGATGTGTCAACCCTCTGCTGCCAAAATGCATGATAGCAACCCACCTCCCTCTCTGTGGGAGAGG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 485854 604 - 2125214 ttatagtgttgatttttgttttcctaatgagtaatTACCTGATTCACAGCAAATGCTTAGTTTACTG---ATTAGGTTTTCTGACATTCTAATTTTTGCATTGAAGTCACAAATTTCCATCTAGTTATAGCCTTACCTGCATCACTTCTGTATCCCTGAGTGAAAGCTCTGAGCTGGGGTCTGCCTGGGAGAGCTTCCCTAGGTGCCTGG-AGACCCCTCTGCCCCTGGAGCCTGGGTCTTATATCTGACA---AAGTGTGTCCCTCCTTGGGCCCAGCCTATGTTGTATGAGGTGCAGGTGTCCATTTTG-CAGGAGCAGAGGGTTCCTCCCTGAGCCTGGTCTCCTGTGGGAGCCTAGGGACCCATCTAACCTGCCACTATCC-AGGATGCATCCCAACTCCACTGCCTGGCTCATGCATCTGAGAAA-GGGAAACACTCTTGTTTCAAAGATCGCAGGGTCCACCCTGTTCTTGCTCCAGACTGGG------------AGTG-GGTGAGTTGCTGAGATGCCGGCCCCAGCTCTGCTCCTCAGCTAATCCAGCTTCCCTGGATGTGTCAACCCTCTGCTGCCAAAACACATGATAGCAACCCAGCTCCCTCTCTGTGGGAGAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 84254 610 + 376347 ttatagtgttgattttcg-tttcctaatgagtaatTACCTGATTCACAGCAAATGCTTAGCTTACTGATTATTAGGTTTTCTGACATTCTAATTTTTGCATTGAAGTCACAAATTTCCATCTAGTTATAGCCTTACCTATATCCCTTCTGTATCCTTGAGTGCAAGATCTGAGCCTGGGTCTGCCTGGGAGAGCTTCCCTGGGTGCCTGG-AGACCCCTCGGCCCCCGGAGCCTGGGTCTTAGATCTGACAAAGAAGTGTGTCCTTCCCTTGGCCCAGCCTATGTTGTAAGAGGTGCAGATGTTCATTTTGTCAGGGGCAGAGGGCTCCTCCCTAAGCCTGGGCTCCTGTGGGAGCCTAGGGACCCATCTAACCTGCCACCATCT-GGGATGCATCCCAACTCCATTGCCTGGCTCATGCATCTGAGAAA-GGGGAACACTCTTGTTTCAAGGATCGCAGGGTCCACCCTGTTCTTGCTCCTGACTGGG------------AGTG-GGCGAGTTGCAGAGGTGCCGGCCCCAGCTCTGCTCCTCAGCTAATCCAGCCTCCCTGGACGTGTCAACCCTCTGCTGACAAAACGCATAATAGCAACCCACCTCCCTCTCTGTGGGAGAGG i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61018540 496 - 77573801 --------------TTTATTTTCCT---------TTCCTTGATGCACAACAGATGCTGAGCTTACCAGT-GTTAGGTTTTCCTATGTTCTCATGTGTGCACTG-GGCTACAACTCTGCCTCTAGTTCCAGCCTCACCTGCATCTCTGCCG----------------------GCTGAGCTCTGCCTGGGAGAGCTGCAGAAGGCGGGTGGAAGAGCCCTGGTCAGC--GAGCCTGGGCCTTGCATCTGACAAGGAAGTGCACAC--CCCTGGGCCCCTATTCCACTGTGAGAGATGCAGGTGAC--TCCTGCATGGAAGAGA---------------------CTCTCCTGGGAGCCTGGAGACC------------------------------CCCAACTCCACTGCTTGCCCTGTGAGTCCAAGGAAGGGGAAACAATACTTTTGTGAGGACTA----GTCCAGTCCATCCTTATGCCCGGATGGGTCAGAAAACACCACTGAGGAGAGCCGCCAAGGGCCTGGGCCT-GCTCAGTCCCTTAGT-------CCCTCCTTGGCTGTG---AAACTCTGCTA-------ACACGTCAGCGCCCTTG---CCTCTCAGGGTCCGA-- i canFam3.chr6 I 443 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218586 31 - 8137123 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343920 580 - 2409723 I a score=328364.000000 s hg38.chr7_KI270899v1_alt 119672 221 + 190869 GCTGACAAGATCCAGTGATGGGGACTCCCCCCAAGAGGAGTGGGCACCTGGGTGTGTGCCGCTGCAGGTCGTCCGTCTGGGTGGG----CGACTGGGTCTCCTCACCCAGCCCTGCTGAATCTGTGGATGTTGATCCTTTAGAAAGTGGCCGGTCCAAAGGGTAGT---------------TGGTGACACAGCTCCAGACCCAGAGTCCCTCACACGA-CCCACACAGAGTGGCCCTGGGC s panTro5.chr7_NW_015973501v1_random 18230 221 - 19153 GCTGACAAGATCCAGTGATGGGGACTCCCCCCAAGAGGAGTGGGCACCTGGGTGTGTGCCGCTGCAGGTCGTCCGTCTGGGTGGG----CACCTGGGTCTCCTCACCCAGCCCTGCTGAATCTGTGGATGTTGATCCTTTAGAAAGTGGCCAGTCCAAAGGGTAGT---------------TGGTGACACAGCTCCAGACCCAGAGTCCCTCACACGA-CCCACACAGAGTGGCCCTGGGC i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 80682 220 - 432965 GCTGACAAGATCCAGTGAT-GGGACTCCCCACAAGAGGAGTGGGCACCTGG--GGGTGCCGCTGCAGGTCGTCCGTCTGGGTGGGCGCCCGCCTGGGTCTCCTCACCCAGCCCTGCTGAATCTGTGGATGTTGATCCTTTAGAAAGTGGCCGGTCCAAA-GGTAGT---------------TGGTGACACAGCTCCAGCCCCAGAGT-CCTCACACGA-CCCACACAGAGTGGCCCTGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 136595 219 + 85365473 GCTGACAAGATCCAGTGATGGGGACTCCCCACAAGAGGAGTGGGCACCTGG--GTGTGCTGCTGCAGGTCGTCCGTCTGGGAGGG----CACCTGGGTTCCCTCACCCAGCCCTGCTGAATCTGTGGATGTTGATCCTTTAGAAAGTGGCCAGTCCAAAGGGTGGC---------------TAGTGACACAGCTCCAGCCCCAGGGTCCCTCACACAA-CCCACACAGAGTGGCCCTGGGC i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 6591 219 + 138751 GCTGATAAGCTCCAATGATGGCGACT-CCCACAAGAGGAGTGGGCCCCTCG--GTGTACTGCTGCAGGCCCTCCCCTGTGGTGCT----CACCAGGGTCTCCCCAGCCAGCCCTGCTGAATCTGAAGATGCTGATCCTTTAGAAAGCGGCCTGTCCAAACAGTGAC---------------TGGTGACACAGCTCCAGCCCCAGAGTCCCTCACACAGCCCCACACAAAGTGGCCCTGGGC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 486458 219 - 2125214 GCTGATAAGCTACAATGATGGGGACT-CCAACAAGAGGAGTGGGCCCCTGG--GTGTGCCACTGCAGGCCCTCCCATGTGGTGCT----CACCAAGGTCTCCCCGGCCAGCCCTGCTGAATCTGCAGATGCTGATGCTTTAGAAAACAGCCTGTCCAAAGAGTGAC---------------TGGTGACACAGCTCCAGCCCCAGAGTCCCTCACACAGCCCCACACAGAGTGGCCCTGGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 84864 198 + 376347 GCTGATAAGCTCC----------------------CGGAGTGCGCCCCTGG--GTGTGCCGCTGCAGGCCCTCCCGTCTGGTGCT----CACCAGGGTCTCCCCAGCCAGCCCTGCTGAACCTGCAGATGCTGATCCTTTAGAAAGCAGCCTGTCCAAACAGTGAC---------------TGGTGACACAGCTCCAGCACCAGAGTCACTCACAGGGCCCCACACAAAGTGGCCCTGGGC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218617 208 - 8137123 GCCGATTAGATCCAGTAACAGG--CTCACCATGAGAGGA-TGGGGGCCTG---GTGTGGCA-TGCAGGTCACACCACTCGG---G----CATTCCTGTCTTCCTAGCCTGCCCTGC-GGGCCTGCAGATGCTGACCCTGGGGCTGCCTCACTGTTTCTCCTCTGGC---------------TGGTG-CATAGCTCCAG-CCCAGAGTCCCATATGTGGCTTGGCACAGAGTGACTC-AGGT i otoGar3.GL873611 I 31 C 0 s canFam3.chr6 61019036 179 - 77573801 GCTGATTAGATCTAATTACAAG--------------------ACCACCTG---GTGCAGCAGAGCAGGTCCTGCCAACTGGTCAG----------GGGGACCCCACTCA---------------------CTGTCCCTTCAGAAG------TGACCAAAGGGTGATCATGTCACTGAAAGGCAGTGCCTCACCTCCAGCCCCA-AGCCCCTCACCTGC-CCTGCACTGTGCAGCCTCAGGC i canFam3.chr6 C 0 I 1869 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343920 580 - 2409723 I a score=147941.000000 s hg38.chr7_KI270899v1_alt 119893 91 + 190869 AGAGAGCTCTTCCCTGGGG-CCACCCAAGGGCACTGCCTTCATCTGG-GGCTGGGGGAGACCATTCATTGGAGTTGTTTTCTGGGCACCTCCG s panTro5.chr7_NW_015973501v1_random 18451 91 - 19153 AGAGAGCTCTTCCCTGGGG-CCACCCAAGGGCACTGCCTTCATCTGG-GGCTGGGGGAGACCATTCATTGGAGTTGTTTTCTGGGCACCTCCG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 80902 90 - 432965 AGAGAGCTCTTCCCTGGGG-CCACCCAAGGGCACTGCCTTCATCT-G-GGCTGGGGGAGACCATTCATTGGAGCTGTTTTCTGGGCACCTCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 136814 91 + 85365473 AGAGAGCTCTTCCCTGGGGACCACCCAAGGGCACTGCCTTCATCTGG-GGCTGGGGG-GACCATTCATCAGAGCTGTTTTCTGGGCACCTCCG i nomLeu3.chr20 C 0 I 1989 s calJac3.chrUn_GL286444 6810 78 + 138751 AGAGGGCTCTTCCCTGGGG-CCACCTGC-------------ATCTGG-TGGTGGCAGGGACCATTCATTGGAGTTGTTTTCTGGGCACCTCTG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 486677 90 - 2125214 AAAGGGCTCTTCCCTGGGG-CCACCCAATAGCACTTCCTG-ATCTGG-CGGTGGTGGGGACCACTCATTGGAGTTGTTTTCTGGGCACTTCTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 85062 91 + 376347 AGAGGTCTCTTCCCTGGGG-TCACCCAACAGCACTTCTTGCATCTGG-CGGTGGTGGGGACCACTCATTGGAGTTGTTTTCTGGGCACCTCTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218825 90 - 8137123 GAAGAGTGCTCCCATGAGG-CCACCTGAGGG-GCTGCCAG-GTCTGGTGGCTGGTGGGGACAGTTAATTTTGACTATTTTCTGAGCACCTCTG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e canFam3.chr6 61019215 1869 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e macFas5.chr3 33602003 960 + 192294377 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343920 580 - 2409723 I a score=2552.000000 s hg38.chr7_KI270899v1_alt 119984 1 + 190869 G s panTro5.chr7_NW_015973501v1_random 18542 1 - 19153 G i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 80992 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 138894 1 + 85365473 g i nomLeu3.chr20 I 1989 C 0 s macFas5.chr3 33602963 1 + 192294377 G i macFas5.chr3 I 960 C 0 s calJac3.chrUn_GL286444 6888 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 486767 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 85153 1 + 376347 G i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218915 1 - 8137123 A i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e canFam3.chr6 61019215 1869 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e rheMac8.chr3 33985434 963 + 185818997 I e saiBol1.JH378296 343920 580 - 2409723 I a score=5817.000000 s hg38.chr7_KI270899v1_alt 119985 2 + 190869 AG s panTro5.chr7_NW_015973501v1_random 18543 2 - 19153 AG i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 80993 2 - 432965 AG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 138895 2 + 85365473 aa i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33602964 2 + 192294377 AA i macFas5.chr3 C 0 C 0 s calJac3.chrUn_GL286444 6889 2 + 138751 AG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 344500 2 - 2409723 aa i saiBol1.JH378296 I 580 C 0 s cebCap1.NW_016107703v1 486768 2 - 2125214 AG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 85154 2 + 376347 AG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2218916 2 - 8137123 AG i otoGar3.GL873611 C 0 I 6455 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e canFam3.chr6 61019215 1869 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e manLeu1.NW_012101810v1 116609 1026 - 2515279 I e cerAty1.NW_012002954v1 16956257 1000 - 21915920 I e macNem1.NW_012019910v1 4367853 963 - 9440265 I e rheMac8.chr3 33985434 963 + 185818997 I a score=5634.000000 s hg38.chr7_KI270899v1_alt 119987 1 + 190869 T s panTro5.chr7_NW_015973501v1_random 18545 1 - 19153 T i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 80995 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 138897 1 + 85365473 t i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33986397 1 + 185818997 T i rheMac8.chr3 I 963 C 0 s macFas5.chr3 33602966 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4368816 1 - 9440265 T i macNem1.NW_012019910v1 I 963 C 0 s cerAty1.NW_012002954v1 16957257 1 - 21915920 T i cerAty1.NW_012002954v1 I 1000 C 0 s manLeu1.NW_012101810v1 117635 1 - 2515279 T i manLeu1.NW_012101810v1 I 1026 C 0 s calJac3.chrUn_GL286444 6891 1 + 138751 T i calJac3.chrUn_GL286444 C 0 I 2008 s saiBol1.JH378296 344502 1 - 2409723 c i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 486770 1 - 2125214 T i cebCap1.NW_016107703v1 C 0 I 1770 s aotNan1.NW_018514293v1 85156 1 + 376347 T i aotNan1.NW_018514293v1 C 0 I 10775 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61019215 1869 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I a score=10010.000000 s hg38.chr7_KI270899v1_alt 119988 2 + 190869 TT s panTro5.chr7_NW_015973501v1_random 18546 2 - 19153 TT i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 80996 2 - 432965 TT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 138898 2 + 85365473 tt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33986398 2 + 185818997 TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33602967 2 + 192294377 TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4368817 2 - 9440265 TT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16957258 2 - 21915920 TT i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 117636 2 - 2515279 TT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 8900 2 + 138751 tt i calJac3.chrUn_GL286444 I 2008 C 0 s saiBol1.JH378296 344503 2 - 2409723 tt i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 271832 2101 + 6586416 I e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61019215 1869 - 77573801 I e chlSab2.chr28 92521 932 - 21531802 I e aotNan1.NW_018514293v1 85157 10775 + 376347 I e cebCap1.NW_016107703v1 486771 1770 - 2125214 I a score=24230.000000 s hg38.chr7_KI270899v1_alt 119990 4 + 190869 GTCA s panTro5.chr7_NW_015973501v1_random 18548 4 - 19153 GTCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 80998 4 - 432965 GTCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 138900 4 + 85365473 gtca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33986400 4 + 185818997 GTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33602969 4 + 192294377 GTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4368819 4 - 9440265 GTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16957260 4 - 21915920 GTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 93453 4 - 21531802 GTCA i chlSab2.chr28 I 932 C 0 s manLeu1.NW_012101810v1 117638 4 - 2515279 GTCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 273933 4 + 6586416 GTCA i colAng1.NW_012117710v1 I 2101 C 0 s calJac3.chrUn_GL286444 8902 4 + 138751 gttg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 344505 4 - 2409723 gttg i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61019215 1869 - 77573801 I e aotNan1.NW_018514293v1 85157 10775 + 376347 I e cebCap1.NW_016107703v1 486771 1770 - 2125214 I a score=750046.000000 s hg38.chr7_KI270899v1_alt 119994 116 + 190869 TATTTTAAGATGATATGAGAAGATCTAATTTATTGTACATATTT--TATTTTTATCACAGATCACTGGTTGAACACATCTTTCTCTAGAGATATG---TGATACCATTAACCCCTGC----------TGCA s panTro5.chr7_NW_015973501v1_random 18552 116 - 19153 TATTTTAAGATGATATGAGAAGACCTAATTTATTGTACATATTT--TATTTTTATCACAGATCACTGGCTGAATACAGCTTTCTCTAGAGATATG---TGATACCATTAACCCCTGC----------TGCA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 81002 126 - 432965 TATTTTAAGATGATATGAGAAGATCTAACTTATTGTACATATTT--TATTTTTATCACAGATCACTGATTGAATACATCTTTCTCTACAGATATG---TGATACCATCAACCCCTGCTGTATTATAATGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 138904 126 + 85365473 tattttaagatgatatgagaagatctaacttattgtacatattt--tatttttatcacagatcactgattgaatacatctttctctagagatatg---tgataccattaacccctgctatattataatgca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33986404 124 + 185818997 TATTTTAAGGTGATATGAGAAGATCTAACTTATTGTACATATTT--TATTTTTATCACGTATCACTGATTGAATACATCTTTCTCT--AGATATG---TGATACCATTAGCCTCTACTATATTATAATGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33602973 124 + 192294377 TATTTTAAGGTGATATGAGAAGATCTAACTTATTGTACATATTT--TATTTTTATCACGTATCACTGATTGAATACATCTTTCTCT--AGATATG---TGATACCATTAGCCTCTACTATATTATAATGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4368823 124 - 9440265 TATTTTAAGGTGATATGAGAAGATCTAACTTATTGTACATATTT--TATTTTTATCACGTATCACTGATTGAATACATCTTTCTCT--AGATATG---TGATACCATTAGCCTCTACTATATTATAATGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16957264 124 - 21915920 TATTTTAAGGTGATATGAGAAGATCTAACTTATTGTACATATTT--TATTTTTATCACGTATCACTGATTGAATACATCTTTCTCT--ACATATG---TAATACCATTAGCCTCTACTATATTATAATGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 93457 121 - 21531802 TATTTTAAGGTGATATG---AGATCTAACTTATTGTACATATTT--TATTTTTATCACGTATCACTGATTGAATACATCTTTCTCT--AGATATG---TGATACCATTAGCCTCTACTGTATTATAATGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 117642 124 - 2515279 TATTTTAAGGTGATATGAGAAGATCTAACTTATTGTACATATTT--TATTTTTATCACGTATCACTGATTGAATACATCTTTCTCT--AGATATG---TGATACCATTAGCCTCTACTATATTGTAATGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 273937 124 + 6586416 TATTTTAAGGTGATATGAGAAGCTCTAACTTATTGTATATATTT--TATTTTTATCACATATCACTGATTGAATACATCTTTCTCT--AGATATG---TGATATGATTAGACTCTACTATATTATAATGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 8906 120 + 138751 cattttaaggtgatacaagaagatataacttattgtacatcgttaatttttttatcacatatcatggattgaataagtctttctccaaagatatgtgatgataccattaa-ccctagtata---------- i calJac3.chrUn_GL286444 C 0 I 10 s saiBol1.JH378296 344509 120 - 2409723 tattttaaggagatatgagaagacattacttaatgaacatcatt-ttttttttatcacatatcacggattgaataaatctttctccagagatatgtaatgataccattaacccctagtgtt---------- i saiBol1.JH378296 C 0 I 1 s aotNan1.NW_018514293v1 95932 119 + 376347 TATTTTAAGGTGGTATGAGAAGATATAACTTATTGTACATCTTT--TTTTTTTATCACATATCACAGATTGAATAAATCTTTCTCCAGAGATATGTGATGATACCATTAACCCCTAGTATA---------- i aotNan1.NW_018514293v1 I 10775 I 10 e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61019215 1869 - 77573801 I e cebCap1.NW_016107703v1 486771 1770 - 2125214 I a score=1304383.000000 s hg38.chr7_KI270899v1_alt 120110 166 + 190869 AACACATACAATTATTTCATAAATTCCAATTCTTTCAAGAGTAATTTATGTTTTCCCTGATATAATTGATGATTGCAGTTGTGCCACATGTTTTCAGTGATCATAGCTTCACACTGTGGTTTAATTTCTGACAGGGAATGCCCCTCC-TAATATTCTTCTCTTAAAA s panTro5.chr7_NW_015973501v1_random 18668 166 - 19153 AACACATACAATTATTTCATAAATTCCAATTCTTTCAAGAGTGATCTATGTTTTCCCTGATATAATTCATGATTGCAGTTGTGCCACGTGTTTTCAGTGATCATAGCTTCACACTGTGGTTTAATTTCTGACAGGGAATGCCCCTCC-TAATATTCTTCTCTTCAAA i panTro5.chr7_NW_015973501v1_random C 0 C 0 s gorGor5.CYUI01015914v1 81128 166 - 432965 AACACATACAATTATTTCATAAATTCCAATTCTTTCAAGAGTAATCTATGTTTTCCCTGATATAATTGATGATTGCAGTTGTGCCACATGTTTTCAGTGATCATAGCTTCACACTGTGGTTTAATTTCTGACAGGGAATGCCCCTCC-TAATATTCTTCTCTTAAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 139030 166 + 85365473 gacacatacaattatttcgtaaattccaattctttcaggagtgatctgtgttttccctgatataattgatgattgcagttgtgccacatgttttcagtgatcgtagcttcacactatggtttaatatctgacagggaacgcccctcc-taatattcttctcttaaaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33986528 166 + 185818997 AACACATACAATTATTTCATAAATCCCAATTCTTTCAGGAGTAATCTATGTTTTCCCCAATATAATTGATAATTGCAGTTGTGCCACATGTTTTCAGTGATGATAGCTTCACACTATGTTTTAATATCGGACAGGGAATGCCCCTAC-TAATATTCTTCTCTGAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33603097 166 + 192294377 AACACATACAATTATTTCATAAATCCCAATTCTTTCAGGAGTAATCTATGTTTTCCCCAATATAATTGATAATTGCAGTTGTGCCACATGTTTTCAGTGATGATAGCTTCACACTATGTTTTAATATCGGACAGGGAATGCCCCTAC-TAATATTCTTCTCTGAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4368947 166 - 9440265 AACACATACAATTATTTCATAAATCCCAATTCTTTCAGGAGTAATCTATGTTTTCCCCAATATAATTGATAATTGCAGTTGTGCCACATGTTTTCAGTGATGATAGCTTCACACTATGTTTTAATATCGGACAGGGAATGCCCCTAC-TAATATTCTTCTCTGAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16957388 166 - 21915920 AACACATACAATTATTTCATAAATCCCAATTCTTTCAGGAGTAATCTATGTTTTCCCCGATATAATTGATAATTGCAGTTGTGCCACATGTTTTCAGTGATGATAGCTTCACACTATGTTTTAATATCGGACAGGGAATGCCCCTAC-TAATATTCTTCTCTGAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 93578 164 - 21531802 AACACATACAATTATTTCATAAATTCCAATTCTTTCAGGAGTAATCTATGTTTTCCCCGATAAAATTGATGATTGCAGTTGTACCAC--GTTTTCAGTGATCGTAGCTTCACACTATGTTTTAATATCGGACAGGGAATGCCCCTAC-TAATATTCTTCTCTTAAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 117766 166 - 2515279 AACACATACAATTATTTCATAAATCCCAATTCTTTCAGGAGTAATCTATGTTTTCCCCGATATAATTGATAATTGCAGTTGTGCCACATGTTTTCAGTGATGATAGCTTCACACTATGTTTTAATATTGGACAGGGAATGCCCCTAC-TAATATTCTTCTCTGAAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 274061 166 + 6586416 AACACATACAATTATTTCATAAATTCCAATTCTTTCAGGAGTAATCTATGTTTTCCCCAATATAATTGATGATTGCAGTTGtgccacatgttttcagtgatcgtagcttcacactatgttttaatatcggacagggaatgcccctac-taatattcttctcttaaaa i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 9036 166 + 138751 aacacataaaattatttcataaattccaattctttcaggagtaatctatgttttccccgatacaattgatgattgcagttgt-tcacattttttcagtgattgtagcttcacactatggtttaatatctgacagggaatgttcctccttaatagtcttctcttaaaa i calJac3.chrUn_GL286444 I 10 C 0 s saiBol1.JH378296 344630 154 - 2409723 ----------attatttcataaaatctaattctttcaggagcaatgtgt-tttcccctgatataattgatgattgcagttgtaccacgtttttt--gtgattgtagcttcacactatggtttaatatctgacagggaacgttcctccttaataatcttctcttaaaa i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 488541 162 - 2125214 AACACATAAAATTATTTCATAAATTCTAATTCTTTCAGGAGTAATCTG--TTTTCCCCGATATAATTGATAATTGCAGTTGTGCCAC-TTTTTT--GTGATTGTAGCGTCACACTATGGTTTAATATCTGAGAGGGAATGTTCCTCCTTAATAATCTTCTCTTAAAA i cebCap1.NW_016107703v1 I 1770 C 0 s aotNan1.NW_018514293v1 96061 155 + 376347 AACACATAAAATTATTTCATAAATTCTAATTCC-----------TATGT-TTTCCCCTGATATAACTGATGATTGTAGTTGTGCCACATTTTTTCAGTGATTGTAGCTTCACACTATGGTTTAATATCTGACAGGGAATGCTCCTCCTTAATAGTCTTCTCTTAAAA i aotNan1.NW_018514293v1 I 10 C 0 e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61019215 1869 - 77573801 I a score=2304932.000000 s hg38.chr7_KI270899v1_alt 120276 319 + 190869 TGGCTCGTGCTTCTTCAAGCTCAGTTGCTTTCCAGATAAGCTTTTGAAT----CCCATTAGCATGTTTTAAGAGGGCCAAATATAATTTTGTTTCGAC---TTTATAAGTTCTTAAGTC-AGGGGAGGATTAGTCTATTTGCTCATCAGCC-TTTGTCTCCAGGGTGATGACA---------TGTCTCT-------ACACAGGTAAATTGTCT--TAACCTCAGCAAGCCTGGGACCTTTCCCCACATGAAGCCTCTGCTTTAATACTGTTCTTAATACAGTTCCCGGCTAAGTTCATGTGTGGGTTGTTAGTATTGAGAACAGAACTAAGTTTGTCCGTATTACA s panTro5.chr7_NW_015973501v1_random 18834 319 - 19153 TGGCTCGTGCTTCTTCAAGCTCAGTTGCTTTCCAGATAAGCTTTTGAAT----CCCATTAGCGTGTTTTAAGAGGGCCAAATATAATTTTGTTTCGAC---TTTATAAGTTCTTAAGTC-AGGGGAGGATGAGTCTATTTGCTCATCAGCC-TTTGTCTCCAGGGTGATGACA---------TGTCTCT-------ACACAGGTAAATTGTCT--TAACCTCAGCAAGCCTGGGACCTTTCCCCACATGAAGCCTCTGCTTTAATACTGTTCTTAATACAGTTCCCGGCTAAGTTCATGTGTGGGTTGTTAGTATTGAGAACAGAACTAAGTTTGTCCGTATTACA i panTro5.chr7_NW_015973501v1_random C 0 N 0 s gorGor5.CYUI01015914v1 81294 318 - 432965 TGGCTCATGCTTCTTCAAGCTCAGTTGCTTTCCAGATAAGCTTTTGAAT----CCCATTAGCATGTTTTAAGA-GGCCAAATATAATTTTGTTTCGAC---TTTATAAGTTCTTAAGTC-AGGGGAGGATGAGTCTATTTGCTCATCAGCC-TTTGTCTCCAGGGTGATGACA---------TGTCTCT-------ACACAGGCAAATTGTCT--TAACCTCAGCACGCCTGGGACCTTTCCCCACATGAAGCCTCTGCTTTAATACTGTTCTTAATACAGTTCCCGGCTAAGTTCACGTGTGGGTTGTTAGCATTGAGAACAGAACCAAGTTTGTCCGTATTACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 139196 318 + 85365473 tggttcgtgcttcttcaagctcagttgctttccagataagcttttgaat----cCCATTAGCATGTTTTAAGACGGCCAACTATCATTTTGTTTTGAC---TTTATAAGTTCTTAAATC--GGGGAGGATCAGTCTATTTGCTCATCAGCC-TTTGTCTCCAGGGTGAGGACG---------TGTCTCT-------ACACAGGTAAATTGTCT--TAACCTCAGCGAGACTGGGACCTTTCCTCACACTAAGCCTCTGCTTTAATACTGTTCTTAATACAGTTCTCGGCCAAGTTCATGTATGGGTTGTTAGTATTGAGAACAGAACTAAGTTTGTCCATATTACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33986694 286 + 185818997 TGGCTCGTGCTTCTTCAAGCTCAGTTGCTTTCCAGATAAGCTTTTGAAT----CCCATTAGTCTGTCTTAAGATATTCAAGTATAATTTTGTTTTGAC---TCTATAAGTTCTTAAATA--GGGGAGGATTAGTCTATTCACTCATCAGTC-TTTGTCTCCAGGGTGATGACG---------TGTCTCT-------ACACAGGTAAATTTTCT--TAACCTCAGTAAGAC-GGGACCTTTCTTC-------------------------------ATACGGTTCTCTGGCAAGTTCATGTGTGAGTTGATAGTATTGAGAACAAAAGTAAGTTTGTCCATATAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33603263 286 + 192294377 TGGCTCGTGCTTCTTCAAGCTCAGTTGCTTTCCAGATAAGCTTTTGAAT----CCCATTAGCCTGTCTTAAGATATTCAAGTATAATTTTGTTTTGAC---TCTATAAGTTCTTAAATA--GGGGAGGATTAGTCTATTCACTCATCAGTC-TTTGTCTCCAGGGTGATGACG---------TGTCTCT-------ACACAGGTAAATTTTCT--TAACCTCAGTAAGAC-GGGACCTTTCTTC-------------------------------ATACGGTTCTCTGGCAAGTTCATGTGTGAGTTGATAGTATTGAGAACAGAAGTAAGTTTGTCCATATAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4369113 286 - 9440265 TGGCTCGTGCTTCTTCAAGCTCAGTTGCTTTCCAGATAAGCTTTTGAAT----CCCATTAGCCTGTCTTAAGAGATTCAAGTATAATTTTGTTTTGAC---TCTATAAGTTCTTAAATA--GGGGAGGATTAGTCTATTCACTCATCAGTC-TTTGTCTCCAGGGTGATGACG---------TGTCTCT-------ACACAGGTAAATTTTCT--TAACCTCAGTAAGAC-GGGACCTTTCTTC-------------------------------ATACGGTTCTCTGGCAAGTTCATGTGTGAGTTGATAGTATTGAGAACAGAAGTAAGTTTGTCCATATAACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16957554 286 - 21915920 TGGCTTGTGCTTCTTCAAGCTCAGTTGCTTTCCAGATAAGCTTTTGAAT----CCCATTAGCCTGTCTTAAGAGATCCAAGTATAATTTTGTTTTGAC---TCTATAAGTTCTTAAATA--GGGGAGGATTAGTCTATTCACTCATCAGTC-TTTGTCTCCAGGGTGATGACG---------TGTCTCT-------ACACAGGTAAATTTTCT--TAACCTCAGTAAGAC-GGGACCTTTCTTC-------------------------------ATACGGTTCTCTGGCAAGTTCATGTGTGAGTTGATAGTATTGAGAACAGAAGTAAGTTTGTCCATATAACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 93742 286 - 21531802 TGGCTCGTGCTTCTTCAAGCTCAGTTGCTTTCCAGATAAGCTTTTGAAT----CCCATTAGCCTGTCTTAAGAGATCCAAGTATAATTTTGTTTTGAC---TCTATAAGTTCTTAAATA--AGGGAGGATTAGTCTATTCGCTCATCAGTC-TTTGTCTCCAGGGTGATGACG---------TGTCTCT-------ACACAGGTAAATTTTCT--TAACCTCAGTAAGAC-GGGACCTTTCTTC-------------------------------ATACGGTTCTCTGGTAAGTTCATGTGTGAATTGATAGTATTGAGAACAGAATTAAGTTTGTCCACATAACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 117932 286 - 2515279 TGGCTCGTGCTTCTTCAAGCTCAGTTGCTTTCCAGATAAGCTTTTGAAT----CCCATTAGCCTGTCTTAAGAGATCCAAGTATAATTTTGTTTTGAC---TCTATAAGTTCTTAAATA--GGGGAGGATTAGTCTATTCACTCATCAGTC-TTTGTCTCCAGGGTGATGACG---------TATCTCT-------ACACAGGTAAATTTTCT--TAACCTCAGTAAGAC-GGGACCTTTCTTC-------------------------------ATACGGTTCTCTGGCAAGTTCATGTGTGAGTTGATAGTATTGAGAACAGAAGTAAGTTTGTCCATATAACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 274227 285 + 6586416 tggctcgtgcttcttcaagctcagttgcttcccagataagcttttgaat----CCCATTAGCCTGTCTTAAGAGATCCAAGTATAATTTTGTTTTGAC---TCTA-AAGTTCTTAAATA--GGGGAGGATTAGTCTATTCGCTCATCAGTC-TTTGTCTCCAGGGTGATGACC---------TGTCTCT-------ACACAGGGAAATTTTCT--TAACCTCAGTAAGAC-GGGACCTTTCTTC-------------------------------ATACGTTTCTCTGGTAAGTTCATGTGTGAGTTGATAGTATTAAGAGCAGAAATAAGTTTGTCCATATAACA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 9202 314 + 138751 cggcttgtgcttcttcaagctcagttgctttccagataagcttttgaat----cctattagcatgttttaagacagccaaatataattttgttttgac---tttataagctcttaaatcca---gagaattaatctatttgctcatcagtc-ttTGTCTCCAGGTTAATAATGTGGTGATAATGTGTCT-------ACACAGGTATATTTCCT--TAACCTTAGTAAGCCTGGGACCTTTCCTCACACTAAGTCTCAGCTTTAATACTGTTCTTAATCCAGTTCTCTGCTAAGTTCCTGTGTGGGTTGTTAGTACTGAGAAGAGAAC------------TATTGCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 344784 305 - 2409723 tggcttgtgcttcttcaagctcagttgctttccagataagcttttgaat----cctattagcatgttttaagacagccaaatataattttgttttgac---tttctaagttcttaaatccagaggagaattaaTCGATTTGCTCATCCGTC-TTTGTCTCCAGGGTAATAATGGGGTGATAATGTGTCT-------ACACAGGTAAATTTCCT--TAACCTTAGTAAGC------------------------CTCAGCTTTAATACTGTTCTTAATCCAGTTCTCTGCTAAGTTCACGTGTGGGTTGTTAGTACTGAGAAGAGAACTAAGTTTGTCCATATTGCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 488703 329 - 2125214 TGGCTTGTGCTTCTTCAAGCTCAGTTGCTTTCCGGATAAGCTTTTGAAT----CCTATTAGCATGTTTTAAGACAGCCAAATATAGTTTTGTTTTGAC---TTTATAAGTTCTTAAATCCAGAGGAGAATTAATCTATTTGCTCATCAGTC-TTTGTCTCCAGGGTAATAATGTGGTGATAATGTGTCT-------ACACAGGTAAATTTCCT--TAACCTTAGTAAGCCTGGGACCTTTCCTCACACTAAGCCTCAGTTTTAATACTGTTCTTAATCCAGTTCTCTGCTAAGTTCATGTGTGGGTTGTTAGTACTGAGGAGAGAACTAAGCTTGTCCATATTGCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 96216 330 + 376347 TGGCTTGTGCTTCTTCAAGCTCAGCTGCTTTCCAGATAAGCTTTTGAAT----CCTATCAGCCTGTTTTAAGACAGCCAAATATAATTTCGTTTTGAC---TTTATAAGTTCTTAAATCCAGAGGAGAATTAATTTATTTGCTCATCAGTCTTTTGTCTCCAGGGTAATAACGTGGTGATAATGTGTCT-------ACACAGGTAAATTTCCT--TAACCTTAGTAAGCCTGGGCCCTTTCCTCACACTAAGCCTCGGCTTTAAGACTGTTCTTAACCCAGTTCTCTGCTAAGTTCACGTGTGGGTTGTTAGCACTGAGAAGAGAACTAAGTTTGTCCATGTTGCA i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61021084 290 - 77573801 tgtctgatgtctctttgggattagatgcatccctgacag------gaatgctgcaCATTAGCA-GATTTAGAAGATCCAGGTATAATTTTGTTTCAACATGTATGAAATTTTTAAAACC--CAGAAGAATGAATCCATCTACT----AGTC-TTTGCCTTCAGG----TAATG---------TGTGTCTCTCCTTCACTCAG---ACTTTTCTAACAACCTCAGTGAGATTGTGAGCATTTTCCACATTAACCCTCTGTC---------------------TTTCCAAACAATTGC-----TGAGTTGTTACTACTGAGATCAGGTCTCAGTTTGTCCCTATTACA i canFam3.chr6 I 1869 C 0 e otoGar3.GL873611 2218918 6455 - 8137123 I a score=609340.000000 s hg38.chr7_KI270899v1_alt 120595 93 + 190869 TTTTCTAATTTGTTACTGACTTTGTAGAGGAA----------------ATGT-----GTTCACTTTATGCATTTATGTTGTCATTGTTTTTACCGTGTATTTCCT-----CTTCCTGTC s gorGor5.CYUI01015914v1 81612 93 - 432965 TTTTCTAATTTGTTGCTGACTTTGTAGAGGAA----------------ACGT-----GTTCACTTTATGCATTTATGTTGTCATTGTTTTTACCGTGTATTTCCT-----CTTCCTGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 139514 93 + 85365473 TTTTCTAATTTATTACTGACTTTGTAGAGAAG----------------ATGT-----GTTCATTTTATGCATTTATGCTGTCATTATTCTTACCGTGTATTTCCT-----CTTCCTGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33986980 89 + 185818997 TTTTCTAA----TTACTGACTTTGTAGAGGAA----------------ATGT-----GTTCATTTTATGCATTCATGTTGTCATTGTTCTTACCGTGTATTTCCT-----GTTCCTGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33603549 89 + 192294377 TTTTCTAA----TTACTGACTTTGTAGAGGAA----------------ATGT-----GTTCATTTTATGCATTCATGTTGTCATTGTTCTTACCGTGTATTTCCT-----GTTCCTGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4369399 89 - 9440265 TTTTCTAA----TTACTGACTTTGTAGAGGAA----------------ATGT-----GTTCATTTTATGCATTCATGTTGTCATTGTTCTTACCGTGTATTTCCT-----GTTCCTGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16957840 89 - 21915920 TTTTCTAA----TTACTGACTTTGTACAGGAA----------------ATGT-----GTTCATTTTATGCATTCATGTTGTCATTGTTCTTACCCTGTATTTCCT-----GTTCCTGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 94028 89 - 21531802 TTTTCTAA----TTACTGACTTTGTAGAGGAA----------------ATGT-----GTTCATTTTATGCATTCATGTTGTCATTGTTCTTACTGTGTATTTCCT-----GTTCCTGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 118218 89 - 2515279 TTTTCTAA----TTACTGACTTTGTAGAGGAA----------------ATGT-----GTTCATTTTATGCATTCATGTTGTCATTGTTCTTACCGTGTATTTCCT-----GTTCCTGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 274512 89 + 6586416 TTTTCTAA----TTACTGACTTTGTAGAGGAA----------------ATGT-----GCTCATTTTATGCATTCATGTTGTCATTGTTCTTACCATGTATTTCCT-----GTTCCTGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 9516 93 + 138751 TTTTCTAATTTATGGCTGATTTTCTAGAGGAA----------------ATGT-----GTTCACTGTATGCATTTACAATGTCACCATTCTTACCACATATTTCCT-----CTTCCTGTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345089 93 - 2409723 TTTTCTAATTTATGGCTGACTTTCTAGAGGTA----------------ACGT-----GTTCATTGTATGCATTTACATTGTCACCGTTCTTACTGCGTATTTCCT-----CTTCCTGTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 489032 93 - 2125214 TTTTCTAATTTATGGCTGACTTTCTGGAGGAA----------------ATGT-----GTACATTGTATGCATTTACATTGTCACCGTTCTTACCACGTATTTCCT-----CTTCCTGTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 96546 78 + 376347 CTTTCTGATTTATGGCTGACTGTCTAGAGGAA----------------GTGT-----GTTCAC---------------TGTCCCCGTTCTTACCACGTATTTCCT-----CTCCCTGTG i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61021374 117 - 77573801 TTTTCCAAATCACTGCTGACTTC-TACAGGAAAGTCATTCCTATAGATATGTAAAAAGTTCATTTTATACATCT-TGTTGACAATGTTCTCATCACATATTTCCCCCTTACTTCCTGCC i canFam3.chr6 C 0 I 105 e otoGar3.GL873611 2218918 6455 - 8137123 I a score=2696973.000000 s hg38.chr7_KI270899v1_alt 120688 404 + 190869 GTATTGCAGTGCGACCCGCTGGGTGCATCACTGAAGGAGATGAGACCAGCCTAGTCCTAGTGACTGCACAAGGCAAGAGGCTCCCCTCGATGTAACAGCA-----GGTGTTGGGAGGGTCTCCTCTCAGTCCCATTTGGGAGGACTAGGGCTGACCAACTGTGTACGTTTGTGCA-------GTCCAAGCTGTATTTCCAGCACTGCGCAGATTCACTGGGGTCGAAGGGCACGTCCCACCTCTCTGCCTAACCTCCTGGCTGTGTGGCCTTGTGGGAGGCAGGCATGGGTCTTTTCCAGCCACAGACACCACTCCCACTGCCCTTCTAG--CCTGGCCCTGAATCCTAGGAATTTCACTCACAGCCAAGCA----------------TCTGGGATCCTTGGTCCA-----GGGTGAGTGCAGCAAGATGGGAAAGGGC s gorGor5.CYUI01015914v1 81705 414 - 432965 GTATTGCAGTGCGACCCTCTGGGTGCATCACTGAAGGAGATGAGAACAGCCCAGCCCTAGTGACTGCACAAGGCAAGAGGCT-CCCTCGATGTAACAGCA-----GGTGTTGGGAGGGTCTCCTCTCAGTCCCAGTTGGGAGGACTA-GGCTGACCAACTGTATACGTTTGTGCA-------GTCCAAGCCATATTTCCAGCACTGTGCAGATTCACT-GGGTCGAAGGGCATGT-CCACCTTTCTGCCTAACCTCCTGGCTGTGTGGCCTTGTGGGAGGCAGGCATGGGTCTTTTCCAGCCACAGACACCACT-CCACTGCCCTTCTAG--CCTGG-CCTGAATCCTAGGAATTTCGCTCACAGCCAAGCATCAGCCAGGTGGTAAGTCTGGGATCCTTGGTCCA-----GGGTGAGTGCAGCAAGATGGGAAAGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 139607 427 + 85365473 GTATTGCGGTGGGACCTGCTGGGTGCATCACTGAAGGAGATGAGATCAGCCCAGCCCTAGTGACTGCACAAGACAGGAGGCTGCCCTCGATGTAACAGCAGGCAGGGCGCTGGGAGGGTCTCCTCTCAGTCCCACTTGGGAGAACTAGGGCTGACCAACTGTGTATGTTTGTGCA-----TGGTCCCAGCCGTACTTCCAGCGCTGTGCAGATTCACTGGGGTCAAAGGGCATGTCCCACCTCTCTGCCTAACCTCCTGGCTGTGTGGCCTTGTGGGAGGCAGGCATGGGTCTTTTCCAGCCACAGACACCCCTCCCACTGCTCTTCTAG--CCTGGCCCTGAATCCTAGGAATTTTGCTCACAGCCAAGCATCAGCCAGGTGGTAAGTCTGGGATCCATGGTCCA-----GGGTGAGTGCAGCAAGATGGGAAAGGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33987069 424 + 185818997 GTATTGCAGTGGCACCC-CTGGGTGCATCACTGAAGGAGACGAGGCCAGCCCAGCCCTAGTGAGTGCACAAGGCAAGAGGCTCCCCTCGAAGTAGCAGCCAGCAGCGTGTTGGGAGGGTCTCCTCTCAATCCCAGTTGGGAGGACTAGGGCTGACCACCTGTGTATGTTTGTGCTGGGCATGGTCCCAGCCGTATTTCCAGCACTGAGCAGATTCACTGGGGTCTAAGGGCATGACCCACCTCTCTGTCTAACCTTCTGGCTGTGCGGCCTTGTGGGAGGCAGTCATGGGTCTTTTCCAGCCACAGACACCACTCTCACTGCTC-TCTGG--CCTGGCTCTGTGTCCTAGGAATTTTGCTCACAGCCAAGCATCAGCCAGGTGGCAAGTCTGGGATCCCTGGTCC-----------AGTGCAGCAAGATGGGAGCGGGC i rheMac8.chr3 C 0 I 28 s macFas5.chr3 33603638 424 + 192294377 GTATTGCAGTGGCACCC-CTGGGTGCATCACTGAAGGAGACGAGGCCAGCCCAGCCCTAGTGAGTGCACAAGGCAAGAGGCTCCCCTCGAAGTAGCAGCCAGCAGCGTGTTGGGAGGGTCTCCTCTCAATCCCAGTTGGGAGGACTAGGGCTGACCACCTGTGTATGTTTGTGCTGGGCATGGTCCCAGCCGTATTTCCAGCACTGCGCAGATTCACTGGGGTCTAAGGGCATGACCCACCTCTCTGTCTAACCTTCTGGCTGTGCGGCCTTGTGGGAGGCAGTCATGGGTCTTTTCCAGCCACAGACACCACTCTCACTGCTC-TCTGG--CCTGGCTCTGTGTCCTAGGAATTTTGCTCACAGCCAAGCATCAGCCAGGTGGCAAGTCTGGGATCCCTGGTCC-----------AGTGCAGCAAGATGGGAGCGGGC i macFas5.chr3 C 0 I 25 s macNem1.NW_012019910v1 4369488 424 - 9440265 GTATTGCAGTGGCACCC-CTGGGTGCATCACTGAAGGAGACGAGGCCAGCCCAGCCCTAGTGAGTGCACAAGGCAAGAGGCTCCCCTCGAAGTAGCAGCCAGCAGCGTGTTGGGAGGGTCTCCTCTCAATCCCAGTTGGGAGGACTAGGGCTGACCACCTGTGTATGTTTGTGCTGGGCATGGTCCCAGCCGTATTTCCAGCACTGCGCAGATTCACTGGGGTCTAAGGGCATGACCCACCTCTCTGTCTAACCTTCTGGCTGTGTGGCCTTGTGGGAGGCAGTCATGGGTCTTTTCCAGCCACAGACACCACTCTCACTGCTC-TCTGG--CCTGGCTCTGTGTCCTAGGAATTTTGCTCACAGCCAAGCATCAGCCAGGTGGCAAGTCTGGGATCCCTGGTCC-----------AGTGCAGCAAGATGGGAGCGGGC i macNem1.NW_012019910v1 C 0 I 28 s cerAty1.NW_012002954v1 16957929 431 - 21915920 GTATTGCAGTGGCACCC-CTGGGTGCATCACTGAAGGAGACGAGGCCAGCCCAGCTCTAGTGAGTGCACAAGGCAAGAGGCTCCCCTCGAAGTAGCAGCCGGCAGCGTGTTGGGAGGGTCTCCTCTCAATCCCAGTTGGGAGGACTAGGGCTGACCACCTGTGTATGTTTGTGCTGGGCACGGTCCCAGCCGTATTTCCAGCACTGCGCAGATTCACTGGGGTCTAAGGGCATGTCCCACCTCTCTGTCTAACCTTCTGGCTGTGTGGCCTTGTGGGAGGCAGTCATGGGTCTTTTCCAGCCACAGACACCACTCCCACTGCTCTTCTGG--CCTGGCTCTGTGTCCTAGGAATTTTGCTCACAGTCAAGCATCAGCCAGGTGGCAAGTCTGGGATCCCTGGTCCA-----GGGTGAGTGCAGCAAGATGGGAGCGGGC i cerAty1.NW_012002954v1 C 0 I 88 s chlSab2.chr28 94117 431 - 21531802 GTATTGCAGTGGCACCC-CTGGGTGCATCACTGAAGGAGATGAGGCCAGCCCAGTCCCAGTGAGTGCACAAGGTAAGAGGCTCCCCTCGAGGTAGCAGCCGGCAGCGCATCGGGAGGGTCTCCTCTCAAGCCCAGTTGGGAGGACTAGGGCTGACCAGCTGTGTATGTTTGTGCTGGGCACGGTCCCAGCCGTATTTCCAGCACTGTGCAGACTCGCTGGGGTCAAAGGGCATGTCTCTCCTCTCTGTCTAACCTTCTGGCTGTGTGGCCTTGTGGGAAGCAGGCAAGGGTCTTTTCCAGCCTCAGACACCACTCCCACTGCTCCTTTGG--CCTGGCCCTGTGTCCTAGGAATTTTGCTCACAGCCAAGCATCAGCCAGGTGGCAAGTCTGGGATCCCTGGTCCA-----GGGTGAGTGCAGCAAGATAGGAAAGGGC i chlSab2.chr28 C 0 I 46 s manLeu1.NW_012101810v1 118307 431 - 2515279 GTATTGCAGTGGCACCC-CTGGGTGCATCACTGAAGGAGACGAGGCCAGCCCAGCCCTAGTGAGTGCACAAGGCAAGAGGCTCCCCTCGAAGTAGCAGCCGGCAGCGTGTTGGGAGGGTCTCCTCTCAATCCCAGTTGGGAGGACTAGGGCTGACCACCTGTGTATGTTTGTGCTGGGCATGGTCCCAGCCGTATTTCCAGCACTGCGCAGATTCACTGGGGTCTAAGGGCATGTCCCACCTCTCTGTCTAACCTTCTGGCTGTGTGGCCTTGTGGGAGGTAGTCATGGGTCTTTTCCAGCCACAGACACCACTCCCACTGCTCTTCTGG--CCTGGTTCTGTGTCCTAGGAATTTTGCTCACAGCCAAGCATCAGCCAGGTGGCAAGTCTGGGATCCCTGGTCCA-----GGGTGAGTGCAGCAAGATGGGAGCGGGC i manLeu1.NW_012101810v1 C 0 I 58 s colAng1.NW_012117710v1 274601 431 + 6586416 GTATTGCAGTGGCACCC-CTGGGTGCATCACTGAAGGAGACGAGGCCAGCCCAGCCCGAGTGAGTGCACAAGGCAAGAGGCTGTCCTCAATGTAGCAGCCGGCAGCATGTTGGGAGGGTCTCCTCTCAATCCCAGTTGGGAGGACTAGGGCTGACCAACTGTGTATGTTTGTGCTGGGCACGGTCCCAGCCGTATTTCCAGCACTGCGCAGATTCACTGTGGTCGAAGGGCATGTCCCATCTCTCTGTCTAACCTTCTGGCTATGTGGCCTTGTGGGAGGCAGGCATGGATCTTTTCCAGCCACAGACACCACTCGTACTGCTCTTCTAG--CCTGGTCCTGGGTCCTAGGAATTTTGCTCACAGCCCAGCATCAGCCAGGTGGCAAGTCTGGGATCCCTGGTCCG-----GGGTGAGTGCAGCAGGATGGGAAAGGGC i colAng1.NW_012117710v1 C 0 I 33 s calJac3.chrUn_GL286444 9609 414 + 138751 GTATTGCAGTGGC-CCT-GTCAGTGCATCATTGAAGGAGATGAGGCCAGCCCAGCCCTAGCGGATGCACAAGACAAGCAGCTGCGCTTGA-ATAACAGCAGGCAGGATGCTGGGAGGGGCTCTGCTCAGTCCTAGTTGGGAGGACTAGGGTTAACCAACTGTGTACGTCTGTGCA-----TGGTCCCAGTGGTATTTCCAGCACTGCGCAGGTTCACTGGAGTCAAAGGGCATGTCCCA-CTCTCTGCCTAACTTCCTGGCTGTGTGGCCTT---------------GGATTTTTTCCAGCCACAGACACCATTCCCACTGCCCTTCTAGCCCCTGACCTTGGGTCCTAGGAATTTTGCTCACACCCAAGCATCAGCCAGGTGGTAAGTCTGGGTTCCTCGATCCAGGCA-GGGTGAGTGCAGCAAGATGGGAAAGGGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345182 415 - 2409723 ATATTGCAGTGGC-CCT-GTCAGTGTGTCACTGAAGGAGATGAGGCCAGCCCAGCCCTAGCAGACGCACAAGGCAGTCAGCTGCACTTGA-GTAACAGCAGGCAGGGTGCTGGGAGGGGCTCTGCTCAGTCCTAGTTGGGAGGACTAGGGTTAACCAGCTGTGTATGTCTGTGCA-----GGGTCCCAGCGGTATTTCCAGCACTGCGCAGGTTCACTGGGGTCAAAGGGCATGTCCCACCTCTCTGCCTAACCTCCTGGCTGTGTGGCCTT---------------GGGTTTTTTCCAGCCACAGACACCATTCCCACTGCCCTTCTAGTCCCTGACCTTGGATCCTAGGAATTTTGCTCACACCCAAGCATCAGCCAGGTGGTAAGTCTGGGATCCTTGGTCCAGGCA-GGGTGAGTGCAGCCAGATGGGAAAGGGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 489125 412 - 2125214 GTATTGCAGTGGC-CCT-GTCAGTGCATCATTGA---AGATGAGGCCAGCCCAGCCCTAGAGGATGCACAAGGCAAGCAGCTGCACTTGA-GTAACAGCAGTCAGGGTGCTGGGAGGGGCTCTGCTCAGTCCTAGCTGGGAAGACTGGTGTTAACCAACTGTGTACGTCTGTGCA-----TGGTCCCAGCGGTATTTCTAGCACTGCCCAGGTTCACTTGGGTCAAAGGCCATGTCCCACCTCTCTGCCTAACCTCCTGGCTGTGTGGCCTT---------------GGGTTTTTTCCAGCCACAGACACCATTCCCACTGCCCTTCTAGTCCCTGACCTTGGATCCTAGGAATTTTGCTCACACCCAAGCATCAGCCAGGTGGTAAGTCTGGGACCCTTGGTCCAGGCA-GGGTGAGTGCAGCAAGATGGGAAAGGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 96624 390 + 376347 GTACTGCA-TGGC-CCT-GTCAGTGAGTCACTGAAGGACATGAGGCCAGCCCAGCCCTAGCGGATGCACAAG-------------------------GCAGGCAGGGTGCTGGGAGGGGCTCTGCTCGGTCCTAGTTGGGAGGACTAGGGTTAACCAACTGTGTACGTCTGTGCA-----CGGCCCCAGCGGTATTTCCAGCACTGCTCAGCTTCACTGGGGTCACAAGGCACGTCCCACCTCTCTGCCTAACCTCCTGGCTGTGTGGCCTT---------------GCATTTTTTACAGCCACAGACCCCATTCCCATTGCCCTTCTAG-CCCTGACCTTGGATCCTAGGAATTTTGCTCACACCCAAGCATCAGTCAGGTGGTAAGTCTGGGATCCTTGGTCCAGGCAGGGGTGAGTGCAGCAAGATGGGAAAGGGC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021491 105 - 77573801 I a score=-6462.000000 s hg38.chr7_KI270899v1_alt 121092 3 + 190869 ACA- s gorGor5.CYUI01015914v1 82119 3 - 432965 ACG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 140034 3 + 85365473 CCG- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33604087 2 + 192294377 -CT- i macFas5.chr3 I 25 I 1 s chlSab2.chr28 94594 3 - 21531802 ACA- i chlSab2.chr28 I 46 I 39 s calJac3.chrUn_GL286444 10023 3 + 138751 -CTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345597 3 - 2409723 -CTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 489537 3 - 2125214 -CTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97014 3 + 376347 -CTG i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 275032 33 + 6586416 I e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021491 105 - 77573801 I e manLeu1.NW_012101810v1 118738 58 - 2515279 I e cerAty1.NW_012002954v1 16958360 88 - 21915920 I e macNem1.NW_012019910v1 4369912 28 - 9440265 I e rheMac8.chr3 33987493 28 + 185818997 I a score=314646.000000 s hg38.chr7_KI270899v1_alt 121095 41 + 190869 GCCTGGCAGCCTCGGGAGAGAGCTGACCCGGAAAACCTGCC s gorGor5.CYUI01015914v1 82122 41 - 432965 GCCTGGCAGCCTCGGGAGAGAGCTGACCCGGAAAACCTGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 140037 41 + 85365473 GCCTGGCAGCCTCGGGAGACAGCTGACCCAGAAAACCTGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33987521 41 + 185818997 GCCTGGCAGCCTCAGGAGGGAGCTGACCCAGAAAACTTGCC i rheMac8.chr3 I 28 C 0 s macFas5.chr3 33604090 41 + 192294377 GCCTGGCAGCCTCAGGAGGGAGCTGACCCAGAAAACTTGCC i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4369940 41 - 9440265 GCCTGGCAGCCTCAGGAGGGAGCTGACCCAGAAAACTTGCC i macNem1.NW_012019910v1 I 28 C 0 s cerAty1.NW_012002954v1 16958448 41 - 21915920 GCCTGGCAGCCTCAGGAGGGAGCTGACCCAGAAAACTTGCC i cerAty1.NW_012002954v1 I 88 C 0 s chlSab2.chr28 94636 41 - 21531802 GCCTGGCAGCCTCAGGAGAGAGCTGACCCAGAAAACTTGCT i chlSab2.chr28 I 39 C 0 s manLeu1.NW_012101810v1 118796 41 - 2515279 GCCTGGCAGCCTCAGGAGGGAGCTGACCCAGAAAACTTGCC i manLeu1.NW_012101810v1 I 58 C 0 s colAng1.NW_012117710v1 275065 41 + 6586416 GCCTGGCAGCCTCAGGAGAGAACTGACCCAGAAAACTTGCC i colAng1.NW_012117710v1 I 33 C 0 s calJac3.chrUn_GL286444 10026 41 + 138751 GCCTGGCAGCCTCAGGAGGGAGCTAACTCAGAAAACCCACC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345600 41 - 2409723 GCCTGGCAGCCTCAGGAGGGAGCTAACTCAGAAAACCCACC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 489540 41 - 2125214 GCCTGGCAGCCTCAGGAGAGAGCTAACTCAGAAAACCCACC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97017 41 + 376347 GCCTGGCAGCCTCAGGAGGGAGCTAACTCAGAAAACCCACC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021491 105 - 77573801 I a score=808038.000000 s hg38.chr7_KI270899v1_alt 121136 109 + 190869 G-GTGG-----CCTCGGAGGAGGGTGTTCCTCGGAGGGCAGGGTCGTCCTCTGATGCCGTGCTCAGCCCTGACCCTCCCATGACCCACCTGCTCTGTGCTCACTGGAAATT-CCCC s gorGor5.CYUI01015914v1 82163 109 - 432965 G-GTGG-----CCTCGGAGGAGGGTGTTCCATGGAGGGCAGGGTCGTCCTTTGATGCCGTGCTCAGCCCTGACCCTCCCATGACCCACCTGCTCTGTGCTCACTGGAAATT-CCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 140078 109 + 85365473 G-GTGG-----CCTCTGAGGAGGGTGTTCCTCGGAGGGCAGGGTCATCCTCTGATGTCGTGCTCAGCCCTGACCCTCCCATAGCCCATCTGCTCCGTGCTCACTGGAAATT-CCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33987562 110 + 185818997 GAGTGG-----CCTCTGAGGAGGGTGTTCCGCAGAGGGCAGGGTCGTCCTCGGATGCCGTGCCCAGCCCTGACCCTCCCATGGCCCACCTGCTCTGTGCTCACTGGAAATT-TCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33604131 110 + 192294377 GAGTGG-----CCTCTGAGGAGGGTGTTCCGCAGAGGGCAGGGTCGTCCTCGGATGCCGTGCCCAGCCCTGACCCTCCCATGGCCCACCTGCTCTGTGCTCACTGGAAATT-TCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4369981 110 - 9440265 GAGTGG-----CCTCTGAGGAGGGTGTTCCGCAGAGGGCAGGGTCGTCCTCGGATGCCGTGCCCAGCCCTGACCCTCCCATGGCCCACCTGCTCTGTGCTCACTGGAAATT-TCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16958489 110 - 21915920 GAGTGG-----CCTCTGAGGAGGGTGTTCCACAGAGGGCAGGGTCGTCCTCGGATGCCGTGCCCAGCCCTGACCCTCCCATGGCCCACCTGCTCTGTGCTCACTGGAAATT-TCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 94677 111 - 21531802 GAGTGG-----CCTCTGAGGAGGGTGTTCCACAGAGGGCAGGGTCGTCCTCGGATGCCGTGCCCAGCCCTGACCCTCCCACGGCCCACCTGCTCTGTGCTCACTGGAAATTCCCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 118837 110 - 2515279 GAGTGG-----CCTCTGAGGAGGGTGTTCCACAGAGGGCAGGGTCGTCCTCAGATGCCATGCCCAGCCCTGACCCTCCCATGGCCCACCTGCTCTGTGCTCACTGGAAATT-TCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 275106 110 + 6586416 GAGTGG-----CCTCTGAGGAGGGTGTTCCGCAGAGGGCAGGGTCGTCCTCGGATGCCGCGCCCAGCCCTGACCCTCCCATGGCCCACCTGCTCTGTGCTCACTGGAAATT-CCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 10067 115 + 138751 AGGCAGCCCTACCTGTGAGGAGGATGCTCCTCAGACAGCAGGGTCATCCCCTGATGTGGTGCCCAGCCCTGACCCACCCATGGCCCACCTGCTCTGTGCTCACTGGAAATT-CCTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345641 115 - 2409723 AGGCGGCCCAACCTGTGAGGAGGATGCTCCTCAGAGGGCAGGGTCGTCCTCTGATGTCGTGCCCAGCCCTGACCCACCTGTGGCCCACCTGCTCTGTGCTCACTGGAAATT-CCCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 489581 115 - 2125214 AGGTGGCCCTACCTGTGAGGAGGATGCTCCTCAGAGGGCAGGGTCCTCCTCTGATGTCGTGCCCAGCCCTGACCCACCCATGGCCCACCTGCTCTGTGTTCACTGGAAATT-CCCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97058 104 + 376347 AGGCAGCCCTACCTGCGAGGAGGATGCTCCTCAGAGGGCAGGGTCCTCCTCCGATGTCGTGCCCAGCCC-----------TGGCCCACCTGCTCTGTGCTCACTGGAAATT-CTCC i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61021596 95 - 77573801 -GGTGG-----CCTC------------TCCAGAGAAGGTGGGG--ATCCTCTTCTGCCATCCCCACCCCACACCTAGCTATAGTCCCTCTGCTCTTTGCTCACCAGAAACA-CCCC i canFam3.chr6 I 105 I 319 e otoGar3.GL873611 2218918 6455 - 8137123 I a score=881589.000000 s hg38.chr7_KI270899v1_alt 121245 137 + 190869 AAAATGCATCTCCGTGGGGCTCAACTCAGTTAAAAGGGAGCAAGTGAGCATCATGCAGATGG-AAGCCTGACACAAACACCTCCCTCCGTTGGCCGTGCTTGGCCGGGGTGAGGACAGTGCTGAAAGCTCAGGGAAGG s gorGor5.CYUI01015914v1 82272 136 - 432965 AAAATGCATCTCTGTGGGGCTC-ACTCAGTTAAAAGGGAGCAAGTGAGCATCACGCAGATGGAAAGCCTGACACAAACACCTCCCTCCGTTGACCATGCTTGGCC-GGGTGAGGACAGTGCTGAAAGCTCAGGGAAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 140187 136 + 85365473 AAAATGCATCTCTGTGGGGCTC-ACTCAGTTAAAAGGGAGCAAGTGAGCATCACGCAGATGG-AAGCCTGGCACAAACACCTTCCTCCGTTGACTGTGCTTGGCCAGGGTGAGGACAGTGCTGAGAGCTCAGGGAAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33987672 136 + 185818997 AGAATGCCTCTCTGTAGGGCCC-ACTCAGTTACAATGGAACAAGTGAGTGTCACGCAGATGG-AAGCCTGGCACAAATGCCTCCCTTCGTTGACCATGCTTGGCCGGGGTGAGGACGGTGCTGGAAGCTCAGGGAAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33604241 136 + 192294377 AGAATGCCTCTCTGTAGGGCCC-ACTCAGTTACAATGGAACAAGTGAGTGTCACGCAGATGG-AAGCCTGGCACAAATGCCTCCCTTCGTTGACCATGCTTGGCCGGGGTGAGGACGGTGCTGGAAGCTCAGGGAAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4370091 136 - 9440265 AGAATGCCTCTCTGTAGGGCCC-ACTCAGTTACAATGGAACAAGTGAGTGTCACGCAGATGG-AAGCCTGGCACAAACGCCTCCCTTCGTTGACCATGCTTGGCCGGGGTGAGGACGGTGCTGGAAGCTCAGGGAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16958599 136 - 21915920 AGAATGCCTCTCTGTAGGGCCC-ACTCAGTTACAATGGAACAAGTGAGTGTCACGCAGATGG-AAGCCTGGCACAAACGCCTCCCTTCGTTGACCATGCTTGGCCGGGGTGAGGACGGTGCTGGAAGCTCAGGGAAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 94788 136 - 21531802 AGAATGCCTGTCTGTGGGGCTC-ACTCAGTTGAAATGGAACAAGTAAGTGTCACGCAGATGG-AAGCCTGGCACAAACGCCTCCCTTCGTTGACCGTGCTTGGCCGGGGTGAGGATGGTGCTGGAAGCTCAGGGAAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 118947 136 - 2515279 AGAATGCCTCTCTGTAGGGCCC-ACTCAGTTACAATGGAACAAGTGAGTGTCACGCAGATGG-AAGCCTGGCACAAATGCCTCCCTTCGTTGACCATGCTTGGCCGGGGTGAGGACGGTGCTGGAAACTCAGGGAAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 275216 136 + 6586416 AGAATGCCTCCTTGTGGGGCTC-AGTCAGTTAAAATGGAACAAGTGAGTGTCACGCAGATGG-AAGCCTGGCACAGACGCCTCCCTTTGTTGACCGTGCTTGGCCTGGGTGAGGACGGTGCTGGAAGCTCAGGGAAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 10182 136 + 138751 AAAGTGTACCTCTGTGGGGCTC-ACGCAGTGAAAAGCAAGCAAGTGAGCATCAGGCAGATGG-AAACCTGGTATAAACAGCTCCCTGCAGCAACCATGCTTGGCCTTGGTGAGGAGAGCGCTGAAATCTTTGGGAAAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345756 136 - 2409723 AAAATGTACCTCCGTGGGGCTC-ACTTAGTGAAAAGCAAGCAAGTGAGCATCACACAGATGG-AAACCTGGTACAAATGGCTCCCTCCAGCAACCACGCTTGGCCTTGGTGAGGACAGCGCTGACAGCTTGGGGAAGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 489696 136 - 2125214 AAAATGCACCTCTGTGGGGCTC-ACTTAGTGAAAAGCAAGCAAGTGAGCATCACGCAGATGG-AAACCTGGTACAAACGGCTCCCTCCAGCAACCATGCTTGGCCTTGGTGAGGACAGCGCTGAAAGCCTGGGGAAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97162 132 + 376347 CGAATGCATCTCTGTGGGGCTC-ACTCAGTGAA----AAGCAAGTGAGCATCAGGCAGACGG-AAACCTGGTACAAACGGCTCCCTCCAGCAACCATTCTTGGCCTTGGTGAGGACGGCACTGAAAGCCTGGGGAAGG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I a score=128979.000000 s hg38.chr7_KI270899v1_alt 121382 40 + 190869 CAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA s nomLeu3.chr20 140323 40 + 85365473 CAGGGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33987808 40 + 185818997 CAGAGCCCTGGATGACCATCCTTGCTCCTGTCTCAGGACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33604377 40 + 192294377 CAGAGCCCTGGATGACCATCCTTGCTCCTGTCTCAGGACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4370227 40 - 9440265 CAGAGCCCTGGATGACCATCCTTGCTCCTGTCTCAGGACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16958735 40 - 21915920 CAGAGCCCTGGACGACCATCCTTGCTCCTGTCTCAGGACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 94924 40 - 21531802 CAGAGCCCTGGTCGACCATCCTTGCTCCCGTCTCAGGACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 119083 40 - 2515279 CAGAGCCCTGGACGACCATCCTTGCTCCTGTCTCAGGACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 275352 40 + 6586416 CAGAGGCCTGGATGACCATCCTTGCTCCTGTCTCAGGACA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e aotNan1.NW_018514293v1 97294 0 + 376347 C e saiBol1.JH378296 345892 0 - 2409723 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C e calJac3.chrUn_GL286444 10318 0 + 138751 C e gorGor5.CYUI01015914v1 82408 0 - 432965 C a score=79508.000000 s hg38.chr7_KI270899v1_alt 121422 13 + 190869 CAGAGCCCTGGAC s gorGor5.CYUI01015914v1 82408 13 - 432965 CAGAGCCCTGGAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 140363 13 + 85365473 CAGAGCCCTGGAC i nomLeu3.chr20 C 0 T 40 s rheMac8.chr3 33987848 13 + 185818997 CAGAGCCCTGGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33604417 13 + 192294377 CAGAGCCCTGGAC i macFas5.chr3 C 0 T 40 s macNem1.NW_012019910v1 4370267 13 - 9440265 CAGAGCCCTGGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16958775 13 - 21915920 CAGAGCCCTGGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 94964 13 - 21531802 GAGAGCCCTGGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 119123 13 - 2515279 CAGAGCCCTGGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 275392 13 + 6586416 CAGAGCCCTGGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 10318 13 + 138751 CAGAGCCCTGGAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345892 13 - 2409723 CAGAGCCCTGGAC i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e aotNan1.NW_018514293v1 97294 0 + 376347 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C a score=51415.000000 s hg38.chr7_KI270899v1_alt 121435 39 + 190869 GACCACCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGA s gorGor5.CYUI01015914v1 82421 39 - 432965 GACCACCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGA i gorGor5.CYUI01015914v1 C 0 T 52 s nomLeu3.chr20 140336 39 + 85365473 GACCACCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGA i nomLeu3.chr20 T 40 C 0 s macFas5.chr3 33604390 39 + 192294377 GACCATCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGA i macFas5.chr3 T 40 C 0 s calJac3.chrUn_GL286444 10331 39 + 138751 GGCCATCCTTGTTCCTGCCTCAGGACACAGAGCCCTGGA i calJac3.chrUn_GL286444 C 0 T 40 s saiBol1.JH378296 345905 39 - 2409723 GGCCATCCTTGCTCCCACCTCAGGACACAGAGCCCTGGA i saiBol1.JH378296 C 0 T 40 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e rheMac8.chr3 33987861 0 + 185818997 C e aotNan1.NW_018514293v1 97294 0 + 376347 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C a score=476.000000 s hg38.chr7_KI270899v1_alt 121474 1 + 190869 C s nomLeu3.chr20 140375 1 + 85365473 C i nomLeu3.chr20 C 0 T 40 s macFas5.chr3 33604429 1 + 192294377 C i macFas5.chr3 C 0 T 40 s calJac3.chrUn_GL286444 10330 1 + 138751 T i calJac3.chrUn_GL286444 T 40 C 0 s saiBol1.JH378296 345904 1 - 2409723 C i saiBol1.JH378296 T 40 C 0 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e rheMac8.chr3 33987861 0 + 185818997 C e aotNan1.NW_018514293v1 97294 0 + 376347 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C e gorGor5.CYUI01015914v1 82460 52 - 432965 T a score=32999.000000 s hg38.chr7_KI270899v1_alt 121475 39 + 190869 GACCACCCTTGCTCCTGTCTCAGGACACAGAGCCATGGA s nomLeu3.chr20 140336 39 + 85365473 GACCACCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGA i nomLeu3.chr20 T 40 C 0 s macFas5.chr3 33604390 39 + 192294377 GACCATCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGA i macFas5.chr3 T 40 C 0 s calJac3.chrUn_GL286444 10331 39 + 138751 GGCCATCCTTGTTCCTGCCTCAGGACACAGAGCCCTGGA i calJac3.chrUn_GL286444 C 0 T 40 s saiBol1.JH378296 345905 39 - 2409723 GGCCATCCTTGCTCCCACCTCAGGACACAGAGCCCTGGA i saiBol1.JH378296 C 0 T 40 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e rheMac8.chr3 33987861 0 + 185818997 C e aotNan1.NW_018514293v1 97294 0 + 376347 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C e gorGor5.CYUI01015914v1 82460 52 - 432965 T a score=476.000000 s hg38.chr7_KI270899v1_alt 121514 1 + 190869 C s nomLeu3.chr20 140375 1 + 85365473 C i nomLeu3.chr20 C 0 T 40 s macFas5.chr3 33604429 1 + 192294377 C i macFas5.chr3 C 0 T 40 s calJac3.chrUn_GL286444 10330 1 + 138751 T i calJac3.chrUn_GL286444 T 40 C 0 s saiBol1.JH378296 345904 1 - 2409723 C i saiBol1.JH378296 T 40 C 0 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e rheMac8.chr3 33987861 0 + 185818997 C e aotNan1.NW_018514293v1 97294 0 + 376347 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C e gorGor5.CYUI01015914v1 82460 52 - 432965 T a score=22215.000000 s hg38.chr7_KI270899v1_alt 121515 27 + 190869 GACCACCCTTGCTCCTGTCTCAGGACA s nomLeu3.chr20 140336 27 + 85365473 GACCACCCTTGCTCCTGTCTCAGGACA i nomLeu3.chr20 T 40 T 40 s macFas5.chr3 33604390 27 + 192294377 GACCATCCTTGCTCCTGTCTCAGGACA i macFas5.chr3 T 40 T 40 s calJac3.chrUn_GL286444 10331 27 + 138751 GGCCATCCTTGTTCCTGCCTCAGGACA i calJac3.chrUn_GL286444 C 0 T 40 s saiBol1.JH378296 345905 27 - 2409723 GGCCATCCTTGCTCCCACCTCAGGACA i saiBol1.JH378296 C 0 T 40 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e rheMac8.chr3 33987861 0 + 185818997 C e aotNan1.NW_018514293v1 97294 0 + 376347 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C e gorGor5.CYUI01015914v1 82460 52 - 432965 T a score=32716.000000 s hg38.chr7_KI270899v1_alt 121542 40 + 190869 CAGAGCCATGGACGACCACCCTTGCTCCTGTCTCAGGACA s nomLeu3.chr20 140323 40 + 85365473 CAGGGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA i nomLeu3.chr20 T 40 T 40 s macFas5.chr3 33604377 40 + 192294377 CAGAGCCCTGGATGACCATCCTTGCTCCTGTCTCAGGACA i macFas5.chr3 T 40 T 40 s calJac3.chrUn_GL286444 10318 40 + 138751 CAGAGCCCTGGATGGCCATCCTTGTTCCTGCCTCAGGACA i calJac3.chrUn_GL286444 T 40 T 40 s saiBol1.JH378296 345892 40 - 2409723 CAGAGCCCTGGACGGCCATCCTTGCTCCCACCTCAGGACA i saiBol1.JH378296 T 40 T 40 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e rheMac8.chr3 33987861 0 + 185818997 C e aotNan1.NW_018514293v1 97294 0 + 376347 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C e gorGor5.CYUI01015914v1 82460 52 - 432965 T a score=51248.000000 s hg38.chr7_KI270899v1_alt 121582 40 + 190869 CAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA s gorGor5.CYUI01015914v1 82408 40 - 432965 CAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA i gorGor5.CYUI01015914v1 T 52 T 40 s nomLeu3.chr20 140323 40 + 85365473 CAGGGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA i nomLeu3.chr20 T 40 T 40 s macFas5.chr3 33604377 40 + 192294377 CAGAGCCCTGGATGACCATCCTTGCTCCTGTCTCAGGACA i macFas5.chr3 T 40 T 40 s calJac3.chrUn_GL286444 10318 40 + 138751 CAGAGCCCTGGATGGCCATCCTTGTTCCTGCCTCAGGACA i calJac3.chrUn_GL286444 T 40 T 40 s saiBol1.JH378296 345892 40 - 2409723 CAGAGCCCTGGACGGCCATCCTTGCTCCCACCTCAGGACA i saiBol1.JH378296 T 40 T 40 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e rheMac8.chr3 33987861 0 + 185818997 C e aotNan1.NW_018514293v1 97294 0 + 376347 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C a score=51248.000000 s hg38.chr7_KI270899v1_alt 121622 40 + 190869 CAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA s gorGor5.CYUI01015914v1 82408 40 - 432965 CAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA i gorGor5.CYUI01015914v1 T 40 T 40 s nomLeu3.chr20 140323 40 + 85365473 CAGGGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA i nomLeu3.chr20 T 40 C 0 s macFas5.chr3 33604377 40 + 192294377 CAGAGCCCTGGATGACCATCCTTGCTCCTGTCTCAGGACA i macFas5.chr3 T 40 C 0 s calJac3.chrUn_GL286444 10318 40 + 138751 CAGAGCCCTGGATGGCCATCCTTGTTCCTGCCTCAGGACA i calJac3.chrUn_GL286444 T 40 T 40 s saiBol1.JH378296 345892 40 - 2409723 CAGAGCCCTGGACGGCCATCCTTGCTCCCACCTCAGGACA i saiBol1.JH378296 T 40 T 40 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e rheMac8.chr3 33987861 0 + 185818997 C e aotNan1.NW_018514293v1 97294 0 + 376347 C e cebCap1.NW_016107703v1 489832 0 - 2125214 C a score=31603.000000 s hg38.chr7_KI270899v1_alt 121662 13 + 190869 CAGAGCCCTGGAC s gorGor5.CYUI01015914v1 82408 13 - 432965 CAGAGCCCTGGAC i gorGor5.CYUI01015914v1 T 40 C 0 s nomLeu3.chr20 140363 13 + 85365473 CAGAGCCCTGGAC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33604417 13 + 192294377 CAGAGCCCTGGAC i macFas5.chr3 C 0 C 0 s calJac3.chrUn_GL286444 10318 13 + 138751 CAGAGCCCTGGAT i calJac3.chrUn_GL286444 T 40 C 0 s saiBol1.JH378296 345892 13 - 2409723 CAGAGCCCTGGAC i saiBol1.JH378296 T 40 C 0 s cebCap1.NW_016107703v1 489832 13 - 2125214 CAGAGCTCTGGAT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97294 13 + 376347 CAGAGCCCTGGAG i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e rheMac8.chr3 33987861 0 + 185818997 C a score=5043.000000 s hg38.chr7_KI270899v1_alt 121675 5 + 190869 GACCA s gorGor5.CYUI01015914v1 82421 5 - 432965 GACCA i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 10331 5 + 138751 GGCCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345905 5 - 2409723 GGCCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 489845 5 - 2125214 GGCTA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97307 5 + 376347 GGCCG i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e canFam3.chr6 61021691 319 - 77573801 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e macFas5.chr3 33604430 0 + 192294377 C e rheMac8.chr3 33987861 0 + 185818997 C e nomLeu3.chr20 140376 0 + 85365473 C a score=52238.000000 s hg38.chr7_KI270899v1_alt 121680 35 + 190869 CCCTTGCTCCTGTCTCAGGA-CACAGAGCCCTGGAT s gorGor5.CYUI01015914v1 82426 35 - 432965 CCCTTGCTCCTGTCTCAGGA-CACAGAGCCCTGGAT i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 10336 35 + 138751 TCCTTGTTCCTGCCTCAGGA-CACAGAGCCCTGGAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345910 35 - 2409723 TCCTTGCTCCCACCTCAGGA-CACAGAGCCCTGGAT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 489850 35 - 2125214 TCCTTGCTCCTGCCTCAGCA-CACAGAGCCCTGGAT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97312 35 + 376347 TCCTTGCTCCTGCCTCAGGA-CACAGAGCCCTGGAT i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61022010 36 - 77573801 CTCTCACTCATCCCTCAGGACCACCGAAGCCTGGGC i canFam3.chr6 I 319 C 0 e colAng1.NW_012117710v1 275405 0 + 6586416 C e otoGar3.GL873611 2218918 6455 - 8137123 I e chlSab2.chr28 94977 0 - 21531802 C e manLeu1.NW_012101810v1 119136 0 - 2515279 C e cerAty1.NW_012002954v1 16958788 0 - 21915920 C e macNem1.NW_012019910v1 4370280 0 - 9440265 C e macFas5.chr3 33604430 0 + 192294377 C e rheMac8.chr3 33987861 0 + 185818997 C e nomLeu3.chr20 140376 0 + 85365473 C a score=1286530.000000 s hg38.chr7_KI270899v1_alt 121715 187 + 190869 TG---TC------TTAGCC---AGTG---------------GTCTTTCCTTGCACAGGAAACAGGCCATGCAGAGA--CCCTGGC--AGGCCACTGCTCCTCCCTGGCCTGGGTTGCAAGGGACAGGGG-CCCTTGAGGA--TGGCATTCCTCCTATGGCCCTCGGCCTCGGACCCCCAGGGAG--CTGTCTCCTGGCACTTCTTGGCAAGTCCACCCCATGG s gorGor5.CYUI01015914v1 82461 187 - 432965 TG---TC------TTAGCC---AGTG---------------GCCTTTCCTTACACAGGAAACAGGCCATGCAGAGA--CCCTGGC--AGGCCACTGCTCCTCCCTGGCCTGGGTTGCAAGGGACAGGGGGCCCTTGAGGA--TGGCATTCCTCCTATGGCCCTCGGCCTCGGACCCC-AGGGAG--CTGTCTCTTGGCACTTCTTGGCAAGTCCACCCCATGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 140376 192 + 85365473 TG---TC------TTAGTCGGTGGTG---------------GCCTTCCCTTGCACAGGAAACAGGCCGCACAGAGA--CCCCGGCAGAGGCCACTGCTCCTCCCTGGCCTGGGTTGCAAGGGACAGGGGGCCCTTGAGGA--TGGCATTCCTCCTGTGGCCCTCGGCCTCGGACCCCCAGGGAG--CCGTCTCCCGGCACTTCTTGGCAAGTCCA-CCCACGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33987861 186 + 185818997 TG---TC------TTAGTC---TGTG---------------GCCTCTCCTGGCAGAGGAAACAGGCCATGTGGAGA--CCCTGGC--AGGCCACTGCTCCTCCCCGGCCTGGGCTGCCAAGGACAGGGGGCCCTTGAGGA--TGGCATTCCTCCAA--GCCCTCGGCCTTGGACCCCCAGGGAG--CTGTCTCCCGGCACTCCTTGGCAAGTGCGCCCCGTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33604430 186 + 192294377 TG---TC------TTAGTC---TGTG---------------GCCTCTCCTGGCAGAGGAAACAGGCCATGCGGAGA--CCCTGGC--AGGCCACTGCTCCTCCCCGGCCTGGGCTGCCAAGGACAGGGGGCCCTTGAGGA--TGGCATTCCTCCAA--GCCCTCGGCCTTGGACCCCCAGGGAG--CTGTCTCCCGGCACTCCTTGGCAAGTGCACCCCGTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4370280 186 - 9440265 TG---TC------TTAGTC---TGTG---------------GCCTCTCCTGGCAGAGGAAACAGGCCATGCGGAGA--CCCTGGC--AGGCCACTGCTCCTCCCCGGCCTGGGCTGCCAAGGACAGGGGGCCCTTGAGGA--TGGCATTCCTCCAA--GCCCTCGGCCTTGGACCCCCAGGGAG--CTGTCTCCCGGCACTCCTTGGCAAGTGCGCCCCGTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16958788 186 - 21915920 TG---TC------TTAGTC---TGTG---------------GCCTCTCCTGGCAGAGGAAACAGGCCATGCGGAGA--CCCTGGC--AGGCCACTGCTCCTCCCCGGCCTGGGCTGCCAAGGACACGGGGCCCTTGAGGA--TGGCATTCCTCCAA--GCCCTCGGCCTTGGACCCCTAGGGAG--CTGTCTCCCGGCACTCCTTGGCAAGTGCGCCCCGTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 94977 186 - 21531802 TG---TC------TTAGTC---TGTG---------------ACCTCTCCTTGCACAGGAAACAGGCCATGCAGAGA--CCCTGGC--AGGCCACTGCTCGTTCCCGGCCTGGGCTGCCAAGGACAGGGGGCCCTTGAGGA--TGGCATTCCTCCAA--GCCCTTGGCCTCGGACCCCCGGGGAG--CTGTCTCCTGGCACTCCTTGGCAAGTGCACCCCATGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 119136 186 - 2515279 TG---TC------TTAGTC---TGTG---------------GCCTCTCCTGGCAGAGGAAACAGGCCATGCGGAGA--CCCTGGC--AGGCCACTGCTCCTCCCCGGCCTCGGCTGCCAAGGACAGGGGGCCCTTGAGGA--TGGCATTCCTCCAA--GCCCTCGGCCTTGGACCCCCAGGGAG--CTGTCTCCCGGCACTCCTTGGCAAGTGCGCCCCGTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 275405 186 + 6586416 TG---TC------TTAGTC---TGTG---------------GCCTCTCCTTGCACAGGAAACAGGCCATGCGGAGA--CCCTGGC--AGGCCACAGCTCCTCCCCGGCCTGGGCTGCAAAGGACAGGGGGCCCTTGAGGA--TGGCACTCCTCCAA--GCCCTCGGCCTCGGACCCCCAGGGAG--CTGTCTCCCGGCACTTCTTGGCAAGTGCACCCCATGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 10371 190 + 138751 TGTGCTC------TAAGTC---TGTG---------------GCCTCTCCTTGCACAGGAAACAGGCCATGCAGAGA--CCCTGGC--AGACCACTGCTCATCCCCGCCCTGGGCTGCAGAGATATGGGGACCCTTGAAGA--TGCCATTCCCCCTATAGACCTCAGCCTCAGACCCC-ATGGAG--CTGTCTCCAGGCACTTCTTGGCAAGTCCACCCCATGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 345945 190 - 2409723 TGTGCTC------TAAGTC---TGTG---------------GCCTCTCCTTGCACAGGAAACAGGCCATGCAGAGA--CCCTGGC--AGGCCACTGCTCCTCCCTGCCCCTGGCTGCAGGGATCCAGGGACCCTTGAAGA--TGCCATTCCTCCCATGGGCCTCAGCCTCAGACCCC-AGGGAG--CTGTCTCCGGGCCCTTCTTGGCAAGTCCACCCCAAGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 489885 190 - 2125214 TGTGCTC------TAAGTC---TGTG---------------GCCTCTCCTTGCACAGGAAACAGGCCATGCAGAGA--CCCTGGC--AGGCCACTGCTCCTCCCTGCCGTGGGCTGCAGGGATCCGGGGACCCTTGAAGA--TGCCATTCCTCCTATGGGCCTCAGCCTCAGACCCC-AGGGAG--CTGTCTCCGGGCACTTCTTGGCAAGTCCACCTCATGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97347 187 + 376347 TG---TC------TAAGTC---TGTG---------------GCCTCTCCTTGCACAGGAAACAGGCCATGCAGAGA--CCCTGGC--AGGCCACTGCTCCTCCCTGCCCTGGGCTGCAGGGATCCGGGGACCCTTGAAGA--TGCCATTCCTCCTATGGGCCTCAGCCTCGGGCCCC-AGGGAG--CTGTCTCCGGGCACTTCTTGGCAAGTCCACTCCATGG i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61022046 168 - 77573801 -----TCCTATGGTCAGCC---TGTGGCTGTGGGATCACATGCCCCTCCCTGCATGGGGG--AGCCCAGGCAGAGAGGCCTTGGC------------------------------GCCAAGGTCCCAGGGCCCTTTGGGAGCTGTCTTTCCTCGAT---------------GACCCCCAGTGAGATCTGTACCTGGGTGGCTTCCTGAAAATCCACCTCTTGA i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2218918 6455 - 8137123 I a score=2132599.000000 s hg38.chr7_KI270899v1_alt 121902 268 + 190869 CCATCTGTGTTGGCTCAAGGCTTTC-------TTTCCCGTCGTTCTTCACATCTGGTGGCCAGGAGTT-CTTCCCTGAAGATCTGGACCTGCCCATAGACCTGG-GCTGGATTACAAAAAAAGAGGAAGC--TGGCAAAATCCGCAGTGTGTCTTTTCC-----------TCCAAGGACATTTAAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTATGAAATAAAGTGCACACGTCCTCTTTTCTGCACGAAACAGAAAGCACGCGGTTATTTTC s gorGor5.CYUI01015914v1 82648 268 - 432965 CCATGTGTGTTGGCTCAAGGCTTTC-------TTTCCCGTCGTTCTTCACATCTGGTG-CCAGGAGTTTCTTCCCTGAAGATCTGGACCTGCCCATAGACCTGG-GCTGAATTACAAAAAAAGAGGAAGC--TGACAAAATCCGCAGTGTGTCTTTTCC-----------TCCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTACGAAATAAAGTGCACACGTCCTCTTTTCTGCACGAAACAGAAAGCACGCGGTTATTTTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 140568 258 + 85365473 CCACGTGTGTTGGCTCGAGGCTTTC-------TTTCCCCTCGTCATTCACATCT--------GGAGCT-CTCCCTTGGAGACCTGGACCTGCCCATAGACCTGG-GCTGGATTACAAAAAAAGAGGAAGC--TGGCGAAATCCGCAGAGTGTCTTTTCC-----------TCCAAGGACATTTTAAAAATACACG-AGGAAAAA-TCAGACTTTCAGAAATGGCAAGTGTTACGCAATGAAGTGCACACGTCCTC-TTTCTGCACGAAACAGAAAGCACGCGGCTATTTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33988047 268 + 185818997 CCATGTGTGTTGGCTCCAGGTTTTC-------TCTCCCGTTGTTCTTCACATCTGGTGGCCAGGAGCT-CTTCCCTGAAGATCCAGACCTGCCCGTAGACCTGG-GCTGGATTACAAAAAAAGAGGAAGC--TGGCAAAATCTGCAGTGTGTCTTTTCC-----------TCCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTATGAAATAAAGTGCACACGTCCTCGTTTCTGCACGAAACAGAAAGCACGCTGTTATTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33604616 268 + 192294377 CCATGTGTGTTGGCTCCAGGTTTTC-------TCTCCCGTTGTTCTTCACATCTGGTGGCCAGGAGCT-CTTCCCTGAAGATCCAGACCTGCCCGTAGACCTGG-GCTGGATTACAAAAAAAGAGGAAGC--TGGCAAAATCTGCAGTGTGTCTTTTCC-----------TCCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTATGAAATAAAGTGCACACGTCCTCGTTTCTGCACGAAACAGAAAGCACGCTGTTATTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4370466 268 - 9440265 CCATGTGTGTTGGCTCCAGGTTTTC-------TCTCCCGTTGTTCTTCACATCTGGTGGCCAGGAGCT-CTTCCCTGAAGATCCAGACCTGCCCGTAGACCTGG-GCTGGATTACAAAAAAAGAGGAAGC--TGGCAAAATCTGCAGTGTGTCTTTTCC-----------TCCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTCTCAAAAATGGCAAGTGTTACGAAATAAAGTGCACACGTCCTCGTTTCTGCACGAAACAGAAAGCACGCCGTTATTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16958974 268 - 21915920 CCATGTGTGTTGGCTCCAGGTTTTC-------TCTCCCATTGTTCTTCACATCTGGTGGCCAGGAGCT-CTTCCCTGAAGATCCGGATCTGCCCGTAGACCTGG-GCTGGATTACAAAAAAAGAGGAAGC--TGGCGAAATCTGCAGTGTGTCTTTTCC-----------TCCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTACGAAATAAAGTGCACACGTCCTCGTTTCTGCACGAAACAGAAAGCACGCCGTTATTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 95163 267 - 21531802 CCATGTGTGTTGGTTCCAGGTCATC-------TCTCCCGTCGTTCTTCACATCTGGCGGCCAGGAGCT-CCTCCCTGAAGATCCAGACCTGCCCGTAGACCTGG-GCTGGATTAC-AAAAAAGAGGAAGC--TGGCGAAATCTGCAGTGTGTCTTTTCC-----------TCCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTACGAAATAAAGTGCACACGTCCTCGTTTCTGCACGAAACAGAAAGCACGCCGTTATTTTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 119322 268 - 2515279 CCATGTGTGTTGCCTCCAGGTTTTC-------TCTCCTGTTGTTCTTCACATCTGGTGGCCAGGAACT-CTTCCCTGAAGATCCGGACCTGCCCGTAGACCTGG-GCTGGATTACAAAAAAAGAGGAAGC--TGGCGAAATCTGCAGTGTGTCTTTTCC-----------TCCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTACGAAATAAAGTGCACACGTCCTCGTTTCTGCACGAAACAGAAAGCACGCCGTTATTTTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 275591 264 + 6586416 CCATGTGTGTTGGCTCCAGGTTTTC-------TCTCCCGTCATTCTTCACATCTGGCGGCCAGGAGCT-CTTCCCTGAAGGTCCGGACCTGCCCATAGACCTGG-GCTGGATCACACAAAAAGAGGAAGC--TGGCGAAATCTGCAGTGTGTCTTCTCC-----------TCCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTACGAAATAAAGTGCACACGTCCTCGTTTCTGCACGAAAC----AGCATGCCGTTATTTTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 10561 256 + 138751 CCATGAATGTTGGCTCAAGGTTTTC-------TTCC-----------AACATCTGATCGCCAGGAGTT-GTTTCCTGAAGATCTGGACCTGCCCCTAGACCTGA-GCTGGATTAC-AGAAAAGAGGAAAC--TGGCAAAATCCACATCGTGTCTTTTCC-----------TTCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGTAAGTGTTACGAAATAAAGTGCACACGTCCTCTTTTCTGCATGAAACAGAAAGCACGTGGTTATTTTT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 346135 256 - 2409723 CCATGCATGTTGGCTCCAGGTTTTC-------TTCC-----------AACGTCTGATTTCCGGGAGTT-GTTTCCTGAAGATCTGGACCTGCCTCTAGACCTGA-GCTGGATTAC-AGAAAAGAGAAAAC--TGGCAAAATCCACATGGTGTCTTTTCC-----------TTCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTACGAAATAAAGTGCACACGTCCTCTTTTCTGCATGAAACAGAAAGCACGTGGTTATTTTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 490075 256 - 2125214 CCATGCATTTTGGCTCAAGGTTTTC-------TTCC-----------AACGTCTGATTTCCAGGAGTT-GTTTCCTGAAGATCTGGACCTGCCCCTAGACCTGA-GCTGGATTAC-AGAAAAGAGAAAAC--TGGTGAAATCCACATCGTGTCTTTTCC-----------TTCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTACGAAATAAAGTGCACACGTCCTCTTTTCTGCATGAAACAGAAAGCACGTGGTTATTTTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97534 256 + 376347 CCATGCATGTCGGTTCGGGGTTTTC-------TTCT-----------AACATCTGATCGCCAGGAGTT-GTTTCCTGAAGATCTTGACCTGCCCCTAGATCTGA-GCTGGATTAC-AGAAAAGAGGAAAC--TGGCAAAATCCGCATCGTGTCTTTTCC-----------TTCAAGGACATTTTAAAAATACATGTGGGAAAAA-TCAGAGTTTCAAAAATGGCAAGTGTTACGAAATAAAGTGCACACGTCCTCTCTTCTGCACGAAACAGAAAGCACGTGGTTATTTTT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2225373 271 - 8137123 CCTTCTGTGTCATTTGAAGGGTCTCCATGTCTTCCTCTGTTGGAGTCCACATCTGACTGCTAGAAGCT-GTTTCCTGGAGATCGGGATTGGTCCTCAGACCTGGAACTAGATTAC---AAAACAGGGATT--TGGGGAAATCTGCA-TGTGTCTTTTCC-----------TCCAAGGACGTTTTTAAAATGCATATGGGAAAAAGTCAGAGTTTCAGAAACGGTTAATGTTATGAAATAAA-TGCACATGTCCTC-TTTCTGTATAAAATAGAAAACACGTGGTTATTTTT i otoGar3.GL873611 I 6455 C 0 s canFam3.chr6 61022214 221 - 77573801 --------------TCAAGGGGATC----------------------------TGAACTCCAGCAATT-GTTTCCTGAAGA------------------------TCTGGATTAC-AGAATGGAGGGTTCCTTGGTGAAATCTGCATTGTGTCTTTTTTCCAAGGGCATATCCAAAGACATTTTAAAAATACATGTGGAGAAAATTCAGGTTTTCAGAAATAGTA--TGTTACAAAATAAACTGCATGTTTCCTCTTTTCTGTATAAAACAGAAAACACATGGTTATTTTT i canFam3.chr6 C 0 C 0 a score=1834656.000000 s hg38.chr7_KI270899v1_alt 122170 222 + 190869 AGCTCCCGGAGCTCCACTGGGAATAGGGTGGTAGAG-T-TGCCAATGTGTACACAGAAGGGTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGATGGA---GTGCGATTCTAAAGGGTGCATTAAGGCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAAGGCTGCCAGCCAGCGGC----GGAGATGGGCGTCCCTGGAACGCCTCCGCTTCCCCGGCTGCCCCGCCGCActcc----cagg s panTro5.chr7_NW_015973503v1_random 0 222 + 11459 AGCTCCCGGAGCTCCACTGGGAATAGGGTGGTAGAG-T-TGCCAATGTGTACACAGAAGGGTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGATGGA---GTGCGATTCTAAAGGGTGCATTAAGGCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAAGGCTGCCAGCCAGCGGC----GGAGATGGGCGTCCCTGGAACGCCTCCGCTTCCCCGGCTGCCCCGCCGCACTCC----CAGG i panTro5.chr7_NW_015973503v1_random N 0 C 0 s gorGor5.CYUI01015914v1 82916 222 - 432965 AGCTCCCGGAGCTCCACTGGGAATAGGGTGGTAGAGTT-TGCCAATGTGTACACAGAAGGGTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGATGGA---GTGCGATTCTAAAGGGTGCATTAAGGCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAAGGCTGCCAGCCAGC-GC----GGAGATGGGCGTCCCTGGAACGCCTCCGCTTCCCCGGCTGCCCCGCCGCActcc----cagg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 140826 222 + 85365473 AGCTCCTGGAGCTCCACCGGGAATAGGGCGGTAGAG-T-TGCCAATGTGTACACAGAAGGCTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGATGGA---GTGCGATTCTAAAGGGTGCATTAAGGCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAACGCTGCCAGCAAGCGGC----GGAGATGGGCGTCCCTGGAACACCTCCGCTTCCCCGGCTGCCTCGCCGCACGCC----CAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33988315 217 + 185818997 AGCTCCCGGAGCTCCACTGGGAATAGGGTGGCAGCG-T-TGCCAATGTGTACACAGAAGGCTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGAGGGGAGTGTGCGATTCTAAAGGGT--------GCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAACGGTGCCAGCAAGCGGC----GGAGATGGGCGTCCCTGGAACGCCTCCGCTTCCCTGGCGGCCTCGCCGCACTCC----CAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33604884 217 + 192294377 AGCTCCCGGAGCTCCACTGGGAATAGGGTGGCAGCG-T-TGCCAATGTGTACACAGAAGGCTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGAGGGGAGTGTGCGATTCTAAAGGGT--------GCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAACGGTGCCAGCAAGCGGC----GGAGATGGGCGTCCCTGGAACGCCTCCGCTTCCCTGGCGGCCTCGCCGCACTCC----CAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4370734 217 - 9440265 AGCTCCCGGAGCTCCACTGGGAATAGGGTGGCAGCG-T-TGCCAATGTGTACACAGAAGGCTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGAGGGGAGTGTGCGATTCTAAAGGGT--------GCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAACGGTGCCAGCAAGCGGC----GGAGATGGGCGTCCCTGGAACGCCTCCGCTTCCCTGGCGGCCTCGCCGCACTCC----CAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16959242 217 - 21915920 AGCTCCCGGAGCTCCACTGGGAATAGGGTGGCAGCG-T-TGCCAATGTGTACACAGAAGGCTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGAGGGGAGTGTGCGATTCTAAAGGGT--------GCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAACGGTGCCAGCAAGCGGC----GGAGATGGGCGTCCCTGGAACACCTCCACTTCCCTGGCGGCCTCGCCGCACTCC----CAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 95430 216 - 21531802 AGCTCCCGGAGCTCCACTGGGAATAGGGTGGCAGCG-T-TGCCAATGTGTACACAGAAGGCTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGA-GGGAGTGTGCGATTCTAAAGGGT--------GCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAACGCTGCCAGGAAGCGGC----GGAGATGGGCGTCCCTGGAACGCCTCCCCTTCCCTGGCGGCCTCGCCGCActct----cggg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 119590 217 - 2515279 AGCTCCCGGAGCTCCACTGGGAATAGGGTGGCAGCA-T-TGCCAATGTGTACACAGAAGGCTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGAGGGGAGTGTGCGATTCTAAAGGGT--------GCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAACGGTGCCAGCAAGCGGC----GGAGATGGGCGTCCCTGGAACGCCTCTGCTTCCCTGGTGGCCTCGCCGCACTCC----CAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 275855 215 + 6586416 AGCTCCCGGAGCTCCACTGGGAATAGGGT-GTAGAG-T-TGCCAATGTGTACACAGAAGGCTTCTTTTTTTATCAGCTGCTGAAGGC------TCCAAGGAGGGGAGTGTGCGATGCTAAAGGGT--------GCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGCGAACGCTGCCAGCAAGCGGC----GGAGACAGGCGTCCCTGGAACGCCTCCGCGTCCCTGGT-GCCTCGCCGCACTCC----CAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 10817 221 + 138751 AGCTTCTGGAGCTACACTGGAAATTGTGTGGTAGAG-T-TGCCAATGTGTACACAGAAGCCTTCTTTTTTTATCAACCGCTGAAGGC------TCCAAGGATACA---GTGTGATTCTAAAGGGTGTATTAAGGCA------------------------------------------------------AACATTGAACTA-------A--CAGAGTGAACACTGCCAGCAAGCGGCAG-TGGAGAGGGGTGTCCCTGGAACGGCTCCACTTCCCTGGCTGCCTTGCCATACTCC-------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 346391 221 - 2409723 AGCTTCTGGAGCTCCACTGGAAATTGGGTGGTAGAG-T-TGCCAATGTGTACACAGAAGCCTTCTTTTTTTATCAGCCGCTGAAGCC------TCCAAGGATAGA---GTGTGATTCTAAAGGGTCCATTAAGGCA------------------------------------------------------AACATTGAGCTG-------A--CAGAGTGAACACTGCCAGCAAGCGGCAG-TGTAGACGGGCGTCCCTGGAATGCCTCCACTTCCCTGGCTGCCTTGCCACACTCC-------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 490331 221 - 2125214 AGCTTCTGGAGCTCCACTGGAAATTGGGTGGTAGAG-T-TGCCAATGTGTACACAGAAGCCTTCTTTTTTTATCAGCCGCTGAAGCC------TCCAAGGATAGA---GTGTGATTCTAAAGGGTGCATTAAGGCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGTGAACACTGCCAGCAAGCGGCAG-TAGAGACGGGCATCCCTGGAACGCCTCCACTTCCCTGGCTGCCTTGCCACACTCC-------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 97790 225 + 376347 AGCTTCTGGAGCTCCGCTGGAAATTGGGTAGCAGAG-C-TGCCAGTGTGTACACAGAAGCCTTCTTTTTTTATCAGCCGCTGAAGCC------TCCAAGGATAGA---GTGTGATTCTAAAGGGTGCATTAAGGCA------------------------------------------------------AACATTGAGCTA-------A--CAGAGTGAACGCTGCCAGCAAGCGGCTG-TGGAGACGGGTGTCCCTGGAACGCCTCCACTTCCCTGGCTGCCTTGCCACCCTCCCAGG---- i aotNan1.NW_018514293v1 C 0 I 116 s otoGar3.GL873611 2225644 213 - 8137123 AGCTCCTGGAGCTCCCCTGGGAATGGTGCGCTGGAG-TGTGCCAATGTGTACACAGAAGGCATTACTTCTCGTCAA-TGCTCAAGTC------CCCTGAGGATGA---GTGCCATTTTAGAGGACGTATTTAGCCA------------------------------------------------------AACA-CAAGTTA-------CGTGAGAGTGAGGGGATCCAGCAAACGGTGACTAGAGATGGGG--------------CCCTCTTCTCCAGCCACCCCGCTGCActcc----caga i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61022435 270 - 77573801 AGCTTCTGGAGCTCCACTGGGAATGGGATGGTAGCA-AGTGCCAGTGTAGACACAGAGAGGTCC-----TTATGAGCTGCTCAACCCATGCCATCCAA----------GTGCCTTTGGAAAGGACGCATGTAAGCAAAACCTTATTCTCACCCGTGTCAATGCTGGTCTAAGTAACAGTAACTCACCAGTAACAATGAGTTACTGGTCTA--CGTAACAGAACTCACCAGTAA-CAAT----GAAGGACACCTGCTCTGGGATGAACCCAGTT-----AAGGTCCTGTAG--ctcc----caga i canFam3.chr6 C 0 C 0 a score=190262.000000 s hg38.chr7_KI270899v1_alt 122392 40 + 190869 ctccgctgcctcatgcacaaggtcaggatgctgatgggaa s panTro5.chr7_NW_015973503v1_random 222 40 + 11459 ctccactgcctcatgcacaaggtcaggatgctgatgggaa i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83138 40 - 432965 ctccgctccctcatgcacaaggtcaggatgctgatgggaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 141048 40 + 85365473 CTCCACTCTCTCATGCGCGAGGTCAGGGTGCTGATGGGAA i nomLeu3.chr20 C 0 M 902 s rheMac8.chr3 33988532 40 + 185818997 CCCAGCTGCCTTGTGAGCAAGGTCAGGATGCTGATGGGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605101 40 + 192294377 CCCAGCTGCCTTGTGAGCAAGGTCAGGATGCTGATGGGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4370951 40 - 9440265 CCCAGCTGCCTTGTGAGCAAGGTCAGGATGCTGATGGGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16959459 40 - 21915920 CCCAGCTGCCTCGTGAGCGAGGTCAGGATGCTGATGGGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 95646 40 - 21531802 cccagctgcctcgtgtgcgaggtcaggatgctgatgggaa i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 119807 40 - 2515279 CCCAGCTGCCTCATGAGCGAGGTCAGGATGCTGATGGGAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 276070 40 + 6586416 cccagctgcctcgtgcgcaaggtcaggatgctgatgggaa i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11038 17 + 138751 -----------------------CAGGATGCTCATAGGAA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 346612 17 - 2409723 -----------------------CAGGATGCTCACAGGAA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 490552 16 - 2125214 -----------------------CAGGATGCTCA-AGGAA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2225857 35 - 8137123 ctcagcacccttactattaa-attaagatagttata---- i otoGar3.GL873611 C 0 I 5 s canFam3.chr6 61022705 40 - 77573801 cttggtttccttatgtgtaaaaccaggatagtgaaactga i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 98015 116 + 376347 I a score=780320.000000 s hg38.chr7_KI270899v1_alt 122432 146 + 190869 gaccctgggttcctaaggaggatttgatgagaaaacgcacaggaggtgc-cagcacactgcctgccacactcaacaaa-ggccattgtta---ttattGTTG--CTGCTATCATTAGTGTTCGTCTGCAGATTCCAGGGTGACATCACTTGAC s panTro5.chr7_NW_015973503v1_random 262 146 + 11459 gaccctgggttcctaaggaggatttgatgagaaaacgcacaggaggtgc-tagcacactgcctgccacactcaacaaa-ggccactgtta---ttattGTTG--CTGCTATCATTAGTGTTCGTCTGCAGATTCCAGGGTGAAATCGCTTGAC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83178 146 - 432965 gaccctgggttcctaaggaggatttgatgagaaaacgcacaggaggtgc-cagcacactgcctgccacactcaacaaa-ggccactgtta---ttattGTTG--CTGCTATCATTAGTGTTCGTCTGCAGATTCCAGGGTGAAATCGCTTGAC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33988572 146 + 185818997 GATCCTGGCTTCCTAAGGAGGATTTGATGAGAAGACACACGCGAGGTGC-TGGCACACTGCGTGCCACACTCCACAAA-GGCCTCTGTTA---TTATCATCC--TTGCTCTCATTAGCATGGGTCTGCAGATTCCAGAGTTTAATCGCTTGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605141 146 + 192294377 GATCCTGGCTTCCTAAGGAGGATTTGATGAGAAGACACACGCGAGGTGC-TGGCACACTGCGTGCCACACTCCACAAA-GGCCTCTGTTA---TTATCATCC--TTGCTCTCATTAGCATGGGTCTGCAGATTCCAGAGTTTAATCGCTTGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4370991 146 - 9440265 GATCCTGGCTTCCTAAGGAGGATTTGATGAGAAGACACACGCGAGGTGC-TGGCACACTGCGTGCCACACTCCACAAA-GGCCTCTGTTA---TTATCATCC--TTGCTCTCATTAGCATGGGTCTGCAGATTCCAGAGTTTAATCGCTTGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16959499 146 - 21915920 GACCCTGGCTTCCTAAGGAGGATTTGATGAGAAGACGCACGCGAGGTGC-TGGCACACTGCGTGCCGCACTCCACAAA-GGCCTCTGTTA---TTATCATCC--TTGCTCTCATTAGCGTGGGTCTGCAGATTCCAGAGTTTAATCGCTTGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 95686 144 - 21531802 gaccctggcttcctaaggaggatttgatgagaagacgcacgcgaggtgc-tggcacactgcgtgccacactccacaaa-ggc--ctgtta---ttatCATCG--TTGCTCTCATTAGCGTGGGTCTGCAGATTCCAGAGTTTAATCGCTTGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 119847 145 - 2515279 GACCCTGGCTTCCTAAGGAGGATTTGATGAGAAGACGCACGCGAGGTGC-TGGCACACTGCGTGCCACACTCCACAAA-GCC-TCTGTTA---TTATCATCC--TTGCTCTCATTAGCGTGGGTCTGCAGATTCCAGAGTTTAATCGCTTGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 276110 148 + 6586416 gaccctggcttcctagggaggatttgatgaggagatgcacgagaggtgc-tagcacactgcctgccgcactccacaaa-ggcctctgtta---ttatCGTCTCGTTGCTCTCCTTAGCGTGGGTCTGCACATTCCAGAGTTTAATCGCTTGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11055 135 + 138751 AACCCTGGGTTCCTAAGGAAGATTTGAT--------------GCGATGC-TAGCACACTGCTTGCCACACTCAACAAA-GGTCACTATTATTTTTATTATTG--TTGCTCTCATCAGCATTCATCTGCAAATTCCAGTGTTAACTCACTTGAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 346629 135 - 2409723 GACCCTAGGTTCCTAAGGAGGATTTAAC--------------AAGGTGC-TAGCACACAGCTTGCCACACTCAACAAA-GGTCACTATTATTTTTATTATCG--TTGCTATCGTCACTGTTCATCTGCAAATTCCAGAGTTAACTCACTTGAT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 490568 135 - 2125214 GACCCTGGTTTCCTAAGGGGGATTTGAC--------------GAGGTGC-TAGCACACTGCTTGCCACACTCAACAAA-GGGCATTATTATTTTTATTATTG--TTGGTATCGTCAGTGTTCATCTGCAAATTCCAGTGTTAACTCACTTGAT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2225897 113 - 8137123 gaccttaa-----taatga-gacttaagaagaagatgcggccaaagtgcttagcacattgccttttatacttaacaaatggtcgttatta---ctGATATTG---TGATTTCAG-----------TGCTGGTGCCA----------------- i otoGar3.GL873611 I 5 C 0 s canFam3.chr6 61022745 125 - 77573801 gaccttaggcttataatgaagatttcataagaaaaagtacccaaaatgcttggcacactatctgatacactcagtaaT-GGGAACTGC-----TTGTGATTG------TACCATCAGTGTTTATCTTTAGATTCTGG---------------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 98015 116 + 376347 I e nomLeu3.chr20 141088 902 + 85365473 M a score=1288996.000000 s hg38.chr7_KI270899v1_alt 122578 172 + 190869 TCAttttttaactgtgtattttgagataatttt---------------aggc---ttacagaaaagttacaaaagttgcaaaAGTTACTTCTCCAGGGACCAACAGCCTGGAGGAGACCCTGTTCC-TTGTGGAAACTGG-CCGCACACCTCCTG--CCTTG--CACAAGATGTCAGGGAAGGGCGGTGGCTTTGG s panTro5.chr7_NW_015973503v1_random 408 172 + 11459 TCAttttttaactgtgtattttgagacaatttt---------------aggc---tgacagaaaagttacaaaagtTGCAAAAGTTACTTCTCCAGGGACCAACAGCCTGGAGGAGACCCTGTTCC-TTGTGGAAACTGG-CCGCACACCTCCTG--CCTTG--CACAAGATGTCAGGGAAGGGCGGTGGCTTTGG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83324 173 - 432965 TCAttttttaactgtgtattttgagataatttt---------------aggc---ttacagaaaagttacaaaagttgcaaaAGTTACTTCTCCAGGGACCAACAGCCTGGAGGAGACCCTGTTCCTTTGTGGAAACTGG-CCCCACACCTCCTG--CCTTG--CACAAGATGTCAGGGAAGGGCGGTGGCTTTGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33988718 172 + 185818997 TCAttttttaacttcgtattctgagataatttt---------------aggc---ttacagaaaagttacaaaagtggcaaaagttACTTCTCCAGGGACCAACAGCCTGGGCGAGTCCCTCTTCC-TTGTGGAAGCTGG-CCCCATACCTCCTG--CCTTG--CACAAGATGTCAGGGAAGGGCGCTGGCTTCGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605287 172 + 192294377 TCAttttttaacttcgtattctgagataatttt---------------aggc---ttacagaaaagttacaaaagtggcaAAAGTTACTTCTCCAGGGACCAACAGCCTGGGCGAGTCCCTCTTCC-TTGTGGAAGCTGG-CCCCATACCTCCTG--CCTTG--CACAAGATGTCAGGGAAGGGCGCTGGCTTCGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371137 172 - 9440265 TCAttttttaacttcgtattctgagataatttt---------------aggc---ttacagaaaagttacaaaagtggcaaaagttACTTCTCCGGGGACCAACAGCCTGGGCGAGTCCCTCTTCC-TTGTGGAAGCTGG-CCCCATACCTCCTG--CCTTG--CACAAGATGTCAGGGAAGGGCGCTGGCTTCGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16959645 172 - 21915920 TCAttttttaacttcgtattctgagataatttt---------------aggc---ttacagaaaagttacaaaagtggcaaaagttACTTCTCCGGGGACCAACAGCCTGGGCGAGTCCCTCTTCC-TTGTGGAAGCTGG-CCCCACACCTCCTG--CCTTG--CACAAGATGTCAGGGAAGGGCGCTGGCTTCGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 95830 172 - 21531802 TCAttttttaacttcgtattctgagataatttt---------------aggc---ttacagaaaagttacaaaagtggcaAAAGTTACTTATCCGGGGACCAACAGCCTGGGCGAGTCCCTCTTCC-TTGTGGAAACTGG-CCCCACACCTCCTG--CCTTG--CACAAGACATCAGGGAAGGGCGGTGGCTTCGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 119992 172 - 2515279 TCAttttttaacttcgtattctgagataatttt---------------aggc---ttacagaaaagttacaaaagtggcaaaagttACTTCTCCGGGGACCAACAGCCTGGGCGAGTCCCTCTTCC-TTGTGGAAGCTGG-CCCCACACCTCCTG--CCTTG--CACAAGATGTCAGGGAAGGGCGCTGGCTTCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 276258 172 + 6586416 TCAttttttaacttcgtattctaagataatttt---------------aggc---ttacagaaaagttacaaaagtggcaaaagttACTTCTCCAGGGACGAACAGCCTGGGCGAGTCCCTCTTCC-TTGTGCAAACTGG-CCACACACCTCCTG--CCTCG--CACAAGACGTCAGGGAAGGGTGGTGGCTTTGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11190 172 + 138751 TCAttttttaactttgtattttgagataatttt---------------aggc---taataggaaagttacaaaCGTTGCAAAAGTCACATCTGCAGGGACCAACAGACTGGATCAGTCCCTCTTCC-TTGTGGAAACTGA-CCCCACACCTCCTG--CCTTG--CATAAGATGTCAGGGAAGAGCAGTGGCTCTGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 346764 190 - 2409723 TCATTTTTTAACTTTGTATTTTGAGATAATTTTAACAGGAAAGTTATGAGGTTTGTAACAGGAAAGTTACAAACGTTGCAAAAGTCACATCTCCAGGGAACAACAGCCTGGATGAGTCCCTCTTCC-TTGTGGAAACTGA-CCTGGCCCCTCCTG--CCTTG--CACAAGATGTCAGGGAAGGGCAGTGGCTCTGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 490703 171 - 2125214 TCAttttttaactttgtattttgagataatttt---------------aggc---taacaggaaagttacaaaTGTTGCAAAAGTCATATCTCCATGGAACAACGGCCTGGATGAGTCACTCTTCC-TTGTGGAAACTGA-CCCCGCACCTCCTG--CCTTG--CAC-AGATGTCAGGGAAGAGCGGTGGCTCTGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 98131 173 + 376347 TCAttttttaactttgcatcttgagataatttt---------------aggc---taacaggaaagttacaaaCGTTGCAAAAGTCACATCTCCAGGGACCAAGGGCCTGGATGAGTGCCTCTTCC-TTGTGGAAAGTGACCCCCGCACGTCCTG--CCTTG--CACAAGATGTCAGGGAAGAGCGGTGGCTCTGG i aotNan1.NW_018514293v1 I 116 I 120 s otoGar3.GL873611 2226010 94 - 8137123 --------------------------------T---------------AAGC-----------------------------------CCCCTCTGGGGACCAACATTCTGGGTGAGTTCCTCTTCC-T-----------G-CCACG---CTCCTG--CCTTG--CGCAGGATGTCAGGGAGAAATGGTGGCTTTGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61022870 124 - 77573801 --------------------------TATTTAT---------------GCAC---T-------------------------AAATCAGCTCTGCAGGGACCAGCAGTCTGGA-AACTCCCTCTTCC-TTGAGGGAATCGA-CCCCACATGTCCTTCCCCTTGCCCACAGGAGGTCTGGGAAAAAGAGTAGCTTTGA i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 141088 902 + 85365473 M a score=502642.000000 s hg38.chr7_KI270899v1_alt 122750 71 + 190869 AGGCTTCAGGGAGTGAATGTCGACGGGGTctgcaagagctcccaatgccc-a-agctggagaaattctaggaa s panTro5.chr7_NW_015973503v1_random 580 71 + 11459 AGGCTTCAGGGAGTGAATGTCGACGGGGTctgcaagagctcccaatgccc-a-agctggagaaattctaggaa i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83497 71 - 432965 AGGCTTCAGGGAGTGAATGTCGAGGGGGTctgcaagagctcccaatgccc-a-agctggagaaattctaggaa i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33988890 71 + 185818997 GGACTTCAGGGAGTAAATGTCGAGGGGGTctgcaagagcttgcaatggcc-a-agctggagacattctaggaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605459 71 + 192294377 GGACTTCAGGGAGTAAATGTCGAGGGGGTctgcaagagcttgcaatggcc-a-agctggagacattctaggaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371309 71 - 9440265 GGACTTCAGGGAGTAAATGTCGAGGGGGTctgcaagagcttgcaatggcc-a-agctggagacattctaggaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16959817 71 - 21915920 GGACTTCAGGGAGTGAATGTCAAGGGGGTctgcaagagcttgcaatggcc-a-agctggagacattctaggaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96002 71 - 21531802 GGACTTCAGGGACTGAATGTCGAGGGGGTctgcaagagctcccaacggcc-a-agctggagaagttctaggaa i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120164 71 - 2515279 GGACTTCAGGGAGTGAATGTCGAGGGGGTctgcaagagcttgcaatggcc-a-agctggagacattctaggaa i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 276430 71 + 6586416 GGACTTCAGGGAGTGAATGCCGAGGGGGTctgcaagagctcccaatggcc-a-agctggagaaattctaggaa i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11362 70 + 138751 GAACTTCAGGGAGTGAATGTCAAGGAGGTCTTC-AGAGCTCCCAATGCAC-A-AGCTGGAGAAATTATAGGAA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 346954 70 - 2409723 GGACTTCAGGGAGTGAATGTCAAGGAGGTCTTC-AGAGCTCCCAATGCCC-A-AGCTGAAGAAATTCTAGGAA i saiBol1.JH378296 C 0 I 3 s cebCap1.NW_016107703v1 490874 70 - 2125214 GGACTTCAGGGAGTGAATGTCAAGGAGGTCTTC-Agagctcccaatgccc-a-agctggagaaattctaggaa i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2226104 67 - 8137123 GGATTTCAGGGAG-----GATGGGGAAGTctgcaagagctcccaaaggccaa-agctggaataattccaggga i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61022994 63 - 77573801 GGATTTCacaaagcaaat---------atctgaaagagctcccagtgacc-acagctagaataatttgaggaa i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 98304 120 + 376347 I e nomLeu3.chr20 141088 902 + 85365473 M a score=13432.000000 s hg38.chr7_KI270899v1_alt 122821 3 + 190869 caa- s panTro5.chr7_NW_015973503v1_random 651 3 + 11459 caa- i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83568 3 - 432965 caa- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33988961 3 + 185818997 caa- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605530 3 + 192294377 caa- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371380 3 - 9440265 caa- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16959888 3 - 21915920 caa- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96073 3 - 21531802 caa- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120235 3 - 2515279 caa- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 276501 3 + 6586416 caa- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11432 3 + 138751 GAA- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 490944 3 - 2125214 gaa- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2226171 3 - 8137123 caa- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61023057 3 - 77573801 -aaa i canFam3.chr6 C 0 I 486 e aotNan1.NW_018514293v1 98304 120 + 376347 I e saiBol1.JH378296 347024 3 - 2409723 I e nomLeu3.chr20 141088 902 + 85365473 M a score=250006.000000 s hg38.chr7_KI270899v1_alt 122824 68 + 190869 aataaataatcgtagCCcagatgctcctggac--tggtggggccacatcctgac-aacccatcgtaagttt s panTro5.chr7_NW_015973503v1_random 654 68 + 11459 aataaataatcgtagCCcagatgctcctggac--tggtggggccacatcctgac-aacccatcgtaagttt i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83571 68 - 432965 aataaataatcgtagCCcagatgctcctggac--tggtggggccacatcctgac-aacccatcgtaagttt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33988964 53 + 185818997 aataaacaatcgtagcaCAGAggct------------------cacactccgacaaacccatcgtaagttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605533 53 + 192294377 aataaacaatcgtagcaCAGAggct------------------cacactccgacaaacccatcgtaagttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371383 53 - 9440265 aataaacaatcgtagcaCAGAggct------------------cacactccgacaaacccatcgtaagttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16959891 53 - 21915920 aataaacaatcgtagcaCAGAggct------------------cacaccccgacaaacccatcgtaagttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96076 53 - 21531802 aataaacaatcgtagcaCAGATGCt------------------cacaccccggcaaacccactgtaagttt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120238 53 - 2515279 aataaacaatcgtagcaCAGAggct------------------cacaccccgacaaacccatcgtaagttt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 276504 52 + 6586416 aataaacaatcgtagcaCAGATGCT------------------CACACCCCGGCAAACCCATC-TAAGTTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11435 69 + 138751 AATGAATACTCATAGCAcatatgctcctggac--tggtgaggtcacatcccaacaaacccatcataagttt i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 490947 69 - 2125214 aatgaatactcatagcacagatgctcctggac--tggtgaggtcacatcccaacaaacccatggtaagtct i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2226174 71 - 8137123 aatgagtagtcatagcaCACAAgctcttcacttataatagggctacatctcaataagcccatcataagtag i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61023060 486 - 77573801 I e aotNan1.NW_018514293v1 98304 120 + 376347 I e saiBol1.JH378296 347024 3 - 2409723 I e nomLeu3.chr20 141088 902 + 85365473 M a score=24894.000000 s hg38.chr7_KI270899v1_alt 122892 6 + 190869 aatata s panTro5.chr7_NW_015973503v1_random 722 6 + 11459 aatata i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83639 6 - 432965 aatata i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33989017 6 + 185818997 aaaata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605586 6 + 192294377 aaaata i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371436 6 - 9440265 aaaata i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16959944 6 - 21915920 aaaata i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96129 6 - 21531802 aaaata i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120291 6 - 2515279 aaaata i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 276556 6 + 6586416 AAAATA i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2226245 6 - 8137123 aaaata i otoGar3.GL873611 C 0 I 2554 e canFam3.chr6 61023060 486 - 77573801 I e aotNan1.NW_018514293v1 98304 120 + 376347 I e saiBol1.JH378296 347024 3 - 2409723 I e cebCap1.NW_016107703v1 491016 0 - 2125214 C e calJac3.chrUn_GL286444 11504 0 + 138751 C e nomLeu3.chr20 141088 902 + 85365473 M a score=359043.000000 s hg38.chr7_KI270899v1_alt 122898 91 + 190869 ccccagggacatggatgaagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcactcatagg s panTro5.chr7_NW_015973503v1_random 728 91 + 11459 ccccagggacatggatgaagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcactcatagg i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83645 90 - 432965 ccccagggacatggacgaagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaaca-cgcatgttctcactcatagg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33989023 91 + 185818997 cccgagggacgtggatgcagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccacatgttctcactcacagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605592 91 + 192294377 cccgagggacgtggatgcagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccacatgttctcactcacagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371442 91 - 9440265 cccgagggacgtggatgcagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccacatgttctcactcacagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16959950 91 - 21915920 cccgagggacgtggatacagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccacatgttctcactcacagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96135 91 - 21531802 cccgagggacgtggatgcggctggaaaccgtcattctgagcaaactattgcaaggacagaaaaccaaacaccacgtgttctcactcacagg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120297 91 - 2515279 cccgagggacgtggatgcagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccacatgttctcactcacagg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 276562 91 + 6586416 CCCGagagacgtggatgcagctggaaaccatcgttctgagcaaactatcgcaaggacagaaaaccaaacaccacatgttctcacccacagg i colAng1.NW_012117710v1 C 0 M 7982 e otoGar3.GL873611 2226251 2554 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e aotNan1.NW_018514293v1 98304 120 + 376347 I e saiBol1.JH378296 347024 3 - 2409723 I e cebCap1.NW_016107703v1 491016 0 - 2125214 C e calJac3.chrUn_GL286444 11504 0 + 138751 C e nomLeu3.chr20 141088 902 + 85365473 M a score=409912.000000 s hg38.chr7_KI270899v1_alt 122989 147 + 190869 tgggaact-gaacaatgagaacacttggacacaggaaggggaacatcatacaccagggcctgttgtggggtggg-gagaggggagggatagcattaggagatatacctaatgtaaatgatgagttaacgggtgcagcacaccaacatgg s panTro5.chr7_NW_015973503v1_random 819 147 + 11459 tgggaact-gaacaatgagaacacttggacacaggaaggggaacatcatacaccagggcctgttgtggggtggg-gagaggggagggatagcattaggagatatacctaatgtaaatgatgagttaatgggtgcagcacaccaacatgg i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83735 147 - 432965 tgggaattggaacaatgagatcacatggacacaggaaggggaacatcacacactggggcctgtcgcggggtgggaaagaggggagggacagcattaggagatatacctaatgt-aatgatgagttaatgggtgcagcacacc-acatgg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33989114 147 + 185818997 tgggaacg-ggacaatgagaacacttggacacagggtggggaacatcacacaccggggcctgtcgtgggttggggggtcggggaaggagagcattggga-atatacctaatgtaaatggcgagttaatgggtgcagcgcaccaacacgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605683 147 + 192294377 tgggaacg-gaacaatgagaacacttggacacagggtggggaacatcacacaccggggcctgtcgtgggttggggggtcggggaaggagagcattggga-atatacctaatgtaaatggcgagttaatgggtgcagcgcaccaacacgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371533 147 - 9440265 tgggaacg-gaacaatgagaacacttggacacagggtggggaacatcacacaccggggcctgtcgtgggttggggggtcggggaaggagagcattggga-atatacctaatgtaaatggcgagttaatgggtgcagcgcaccaacacgg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960041 147 - 21915920 tgggaacg-gaacaatgagaacacttggacacagagtggggaacatcatacaccggggcctgtcgtggggtggggggtcggggaaggagagcattggga-atatacctaatgtaaatggcgagttaatgggtgcagcgcaccaacacgg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96226 146 - 21531802 tgggaacg-gagcaatgagatcacatggacacagggtggggagcatcacacaccggggcctgtcgtggggt-gggggccggggaaggatagcattgggg-atatacctaatgtaaatggcgagttaatgggcgcagcacaccaacacgg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120388 147 - 2515279 tgggaacg-gaacaatgagaacacttggacacagggtggggaacatcacacaccggggcctgtcgtggggtggggggtcggggaaggagagcattggga-atatacctaatgtaaatggcgagttaatgggtgcagcgcaccaacacgg i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 276653 7982 + 6586416 M e otoGar3.GL873611 2226251 2554 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e aotNan1.NW_018514293v1 98304 120 + 376347 I e saiBol1.JH378296 347024 3 - 2409723 I e cebCap1.NW_016107703v1 491016 0 - 2125214 C e calJac3.chrUn_GL286444 11504 0 + 138751 C e nomLeu3.chr20 141088 902 + 85365473 M a score=77010.000000 s hg38.chr7_KI270899v1_alt 123136 23 + 190869 cacatgtatacatatgtaacaaa s panTro5.chr7_NW_015973503v1_random 966 23 + 11459 cacatgtatacatatgtaacaaa i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83882 23 - 432965 cacatgtatacatatgtaacaaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 141990 23 + 85365473 cacatggatacatacgtaacaaa i nomLeu3.chr20 M 902 C 0 s rheMac8.chr3 33989261 22 + 185818997 cac-tgtatacatgtgtaacaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605830 22 + 192294377 cac-tgtatacatgtgtaacaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371680 22 - 9440265 cac-tgtatacatgtgtaacaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960188 22 - 21915920 cac-tgtatacatgtgtaacaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96372 22 - 21531802 cac-tgtatacatgtgtaacaaa i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120535 22 - 2515279 cac-tgtatacatgtgtaacaaa i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 276653 7982 + 6586416 M e otoGar3.GL873611 2226251 2554 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e aotNan1.NW_018514293v1 98304 120 + 376347 I e saiBol1.JH378296 347024 3 - 2409723 I e cebCap1.NW_016107703v1 491016 0 - 2125214 C e calJac3.chrUn_GL286444 11504 0 + 138751 C a score=204056.000000 s hg38.chr7_KI270899v1_alt 123159 52 + 190869 cctgcacgttgtgcacatgtaccctagaacttaaaagtataataatagaaaa s panTro5.chr7_NW_015973503v1_random 989 52 + 11459 cctgcacgttgtgcacatgtaccctagaacttaaaagtataataataggaaa i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83905 52 - 432965 cctgcatgttgtgcacatgtaccctagaacttaaaacaataataatagaaaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 142013 50 + 85365473 -ctgcacgttgtgcacatgtaccctagcac-tagaagtataatagtagaaaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33989283 51 + 185818997 cctgcacattgtgcacacgtaccctagaactta-aagtataataataataaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605852 51 + 192294377 cctgcacattgtgcacacgtaccctagaactta-aagtataataataataaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371702 48 - 9440265 cctgcacattgtgcacacgtaccctagaactta-aagt---ataataataaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960210 51 - 21915920 cctgcacattgtgcacacgtaccctagaactta-aagtataataataataaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96394 50 - 21531802 cctgcacgctgtgcacacgtaccctagaactta-aagtataataataat-aa i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120557 51 - 2515279 cctgcacattgtgcacacgtaccctagaactta-aagtataataataataaa i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 284636 51 + 6586416 cctgcacgttgtgcacacataccctagaactta-aagtataataataataaa i colAng1.NW_012117710v1 M 7982 C 0 e otoGar3.GL873611 2226251 2554 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e aotNan1.NW_018514293v1 98304 120 + 376347 I e saiBol1.JH378296 347024 3 - 2409723 I e cebCap1.NW_016107703v1 491016 0 - 2125214 C e calJac3.chrUn_GL286444 11504 0 + 138751 C a score=1008642.000000 s hg38.chr7_KI270899v1_alt 123211 152 + 190869 -aaaa-taccccaggtcaaaatgcatttaatgcacctca-tcttccgggcatcatagctgagccctct--------cacctcagacatgctcagagcgtggatatgaggctggcattggtaaaatcatctcacacaGCTCACAGCTGCCTGAAGATGCTCACT s panTro5.chr7_NW_015973503v1_random 1041 153 + 11459 -aaaagtaccccaggtcaaaatgcatttaatgcacctca-tcttccgggcatcatagctgagccctct--------cacctcagacatgctcagagcgtggatatgaggctggcattggtaaaatcatctcacacaGCTCACAGCTGCCTGAAGATGCTCACT i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 83957 154 - 432965 -aaaaataccccaggtcaaaatgcatttaatgcatctcattcttccgggcgtcatagctgagccctct--------cacctcagacgtgctcagagcatggatatgaggctggcattggtaaaatcatctcacacaGCTCACAGCTGCCTGAAGAGGCTCACT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 142063 152 + 85365473 -aaaa-tatcccaggtcaaaatgcatttaataaacctca-tcttccgggcatcgtagctgagccctct--------cacctcagacgtgctcggagcatggacacgaggctgccgttggtaaaatcatctcacacaGCTCACAGCTGCCTGAAGATGCTCACT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33989334 151 + 185818997 -aaa--taccccaggtcaaaatgcattgaatgcacctca-tcttccgggcatcacggctgagccctct--------cacctccgacgtgctcagagcatggacacgaggctaccgctggtaaaatcaccttgcaCAGCTTGAGGCTGCCTGAAGATACTCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33605903 151 + 192294377 -aaa--taccccaggtcaaaatgcattgaatgcacctca-tcttccgggcatcacggctgagccctct--------cacctccgacgtgctcagagcatggacacgaggctgccgctggtaaaatcaccttgcacaGCTTGAGGCTGCCTGAAGATACTCACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371750 151 - 9440265 -aaa--taccccaggtcaaaatgcattgaatgcacctca-tcttccgggcatcacggctgagccctct--------cacctccgacgtgttcagagcatggacacgaggctgccgctggtaaaatcaccttgcaCAGCTTGAGGCTGCCTGAAGATACTCACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960261 151 - 21915920 -aaa--taccccaggtcaaaatgcatcgaatgcacctca-tcttccgggcatcacggctgagccctct--------cacctccgacgtgctcagagcatggacacgaggctgccgctggtaaaatcaccttgcaCAGCTTGCGGCTGCCTGAAGATACTCACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96444 151 - 21531802 -aaa--taccccaggtcaaaatactttgaatgcacctca-tcttccgggcatcatggctgagtcctct--------cacctctgacgtgctcagagcatggacacgaggctaccgctggtaaaatcatctcgcacaGCCCGCGGCTGCCTGACGATGCCCACT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120608 151 - 2515279 -aaa--taccccaggtcaaaatgcattgaatgcacctca-tcttctgggcatcacggctgagccctct--------cacctccgacgtgctcagagcatggacacgaggctgccgctggtaaaatcaccttgcaCAGCTTGCGGCTGCCTGAAGATACTCACT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 284687 151 + 6586416 -aaa--TACCCCAGGTCaaaatgcattgaatgcacctca-tcttccgggcatcacggctgagtcctct--------cacctccgacgtgctcagagcgtggacacgaggctgccgctggtaaaatcatctcgcacaGCTCGTGGCTGCCTGAAGATGCTCACT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11504 147 + 138751 aaaa--tgccccaggtcaaaatgcatttgaggcatctca-ccttccgggcatcatagctgagccctct--------ca-ctcagacgtgctcagagcgtggacatgaggctgaagttaacaaaatcatctcacacTGTTCATGGCTGCCTGAAGATT----CT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 491016 155 - 2125214 aaaa--tgccccaggtcaaaatgcatttgaggcatctca-ccttccgggcatcatagctgagccctctcactcagaca-ctcagacatgctcagagcatggacacgatgctgcagttggcaaaatcatctcacacTGCTCATGGCTGCCTGAAGATT----CT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 98424 147 + 376347 aaaa--tgccccaggtcaaaatgcgtttgaggcatctca-tcttccgggcatcgtagctgagccctct--------ca-ctcagtcgtgctcagagcgtggacacgaggctgcagttggccacatcatctcacacTGCTCGTGGCTGCCTGAAGACT----CT i aotNan1.NW_018514293v1 I 120 C 0 e otoGar3.GL873611 2226251 2554 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e saiBol1.JH378296 347024 3 - 2409723 I a score=1799950.000000 s hg38.chr7_KI270899v1_alt 123363 276 + 190869 CACCAGCTGCCAGCATTTCT-GGGGCGGTCC-TGAGAGGGTCTGCAGCTGGCGCACGAGGTGAAC-ACAATGCTAAGGACAAAATTACA-CAAGGAATGTGCAAGAGTTCCACTGTTCACAGTGGGAATCACCT------AATTCACACACAACCAGCTTCACAAAATGAGCTCCAGGCGGCCGGCTGGAGG---GACGCGGAGGCCAGCAGGTGGAAGCC-AGTGTTTAAAGCCACAGGTAGACGCG-GCCTCAGCACCTTCCCGTTTGTGCCGGCCCAGAGGCACTGCC- s panTro5.chr7_NW_015973503v1_random 1194 276 + 11459 CACCAGCTGCCAGCATTTCT-GGGGCGGTCC-TGAGAGGGTCTGCAGCTGGCGCACGAGGTGAAC-ACAATGCTAAGGACAAAATTACA-CAAGGAATGTGCAAGAGTTCCACTGTTCACAGTGGGAATCACCT------AATTCACACACAACCAGCTTCACAAAATGAGCTCCAGGCGGCCGGCTGGAGG---GACGCGGAGGCCAGCAGGTGGAAGCC-AGTGTTTAAAGCCACAGGTAGATGCG-GCCTCAGCACCTTCCCGTTTGTGCCGGCCCAGAGGCACTGCC- i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 84111 275 - 432965 CACCAGCTGCCAGCATTTCT--GGGCGGTCC-TGAGAGGGTCTGCAGCTGGAGCACGAGGTGAAC-ACAACACTAAGGACAAAATTACACCAAGGAATGTGCAAGAGTTCCACTGTTCACAGTGGGAATCACCT------AATTCACACACAACCAGCTTCACAAAACGAGCTCCAGGCGGCCGGCTGGAGG---GACGCGGAGGCCAGCAGGT-GAAGCC-AGTGTTTAAAGCCACAGGTAGACGCG-GCCTCAGCACCTTCCCATTTGTGCCGGCCCAGAGGCACTGCC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 142215 280 + 85365473 CACTGGCTGCCAGCATTTCCTGGGGCAGCCC-TGAGAGGGTCTGCAGCTGGCGCACGAGGTGAAC-GCAATGCTAAGGACAAAATTACA-CAAGGAATGTGCAAGAGTTCCACTGTTGACAGTGGGAATCACCT------AATTCACACACAACCAGCTTCACAGAATGAGCGCCAGGTGGCCAGCTGGAGGGATGACACGGAGACCAGCAGGTGGAAGCC-AGTGTTTAAAGCCACAGGTAGACGCG-GCCTCAGCACCTTCCCGTTTGTGCCGGCCCAGAGGCACTGCC- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33989485 257 + 185818997 CACTAGCTGCCAGCATTTCCTGGGGCGGTCC-TGAGAGGGTCTGCAGCTGGCGCACGAGGCGAAC-GCAACGCCAAGGACAAAATGACA-CAAGGAACGTGCAAGAGTTCCA--------------------CT------AATTCACACACAACCAGCTTCACAGAACGAGCTCCAGGCGGCCGGCGGGGGG---GATGCGGAGGCCAGCAGGTGGAAGCC-AGTGTTTAGAGCCACAGACAGACGCG-CCCTCAGCACCTTTCCGTTTGTGACAGCCCAGAGACGCTGCC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33606054 257 + 192294377 CACTAGCTGCCAGCATTTCCTGGGGCGGTCC-TGAGAGGGTCTGCAGCTGGCGCACGAGGCGAAC-GCAACGCCAAGGACAAAATGACA-CAAGGAACGTGCAAGAGTTCCA--------------------CT------AATTCACACACAACCAGCTTCACAGAACGAGCTCCAGGCGGCCGGCGGGGGG---GATGCGGAGGCCAGCAGGTGGAAGCC-AGTGTTTAGAGCCACAGACAGACGCG-CCCTCAGCACCTTTCCGTTTGTGACAGCCCAGAGACGCTGCC- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4371901 257 - 9440265 CACTAGCTGCCAGCATTTCCTGGGGCGGTCC-TGAGAGGGTCTGCAGCTGGCGCACGAGGCGAAC-GCAACGCCAAGGACAAAATGACA-CAAGGAACGTGCAAGAGTTCCA--------------------CT------AATTCACACACAACCAGCTTCACAGAACGAGCTCCAGGCGGCCGGCGGGGGG---GATGCGGAGGCCAGCAGGTGGAAGCC-AGTGTTTAGAGCCACAGACAGACGGG-CCCTCAGCACCTTCCCGTTTGTGACAGCCCAGAGACGCTGCC- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960412 257 - 21915920 CACTAGCTGCCAGCATTTCCTGGGGCAGTCC-TGAGAGGGTCTGCAGCTGGCGCACGAGGCGAAC-GCAACGCCAAGGACAAAATGACA-CAAGGAACGTGCAAGAGTTCCA--------------------CT------AATTCACACACAACCAGCTTCACAGAACGAGCTCCAGGCGGCCGGCAGGGGG---GATGCGGAGGCCAGCAGGTGGAAGCC-AGTGTTTAGAGCCACAGACAGACGCG-CCCTCAGCACCTTCCCGTTTGTGCCAGCCCAGAGACGCCGCC- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96595 257 - 21531802 CACTAGCTGCCAGCATTTCCTGGGGCGGTCC-TGAGAGGGTCTGCAGCTGGCGCACGAGGCGAAC-GCAACGCCAAGGACAAAATTACA-CAAGGAACGTGCAAGAGTTCCA--------------------CT------AATTCACACACAACCAGCTTCACAGAACGAGCTCCAGGCGGCCGGCGGGGGG---GACGCAGAGGCCAGCAGGTGGAAGCC-AGTGTTTAGAGCCACAGACAGACGCG-CCCTCAGCACCTTCCCGTTTGTGCCAGCCCAGAGACGCTGCC- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 120759 257 - 2515279 CACTAGCTGCCAGCATTTCCTGGGGCAGTCC-TGAGAGGGTCTGCAGCTGGCGCACGAGGCGAAC-GCAACGCCAAGGACAAAATGACA-CAAGGAACGTGCAAGAGTTCCA--------------------CT------AATTCACACACAACCAGCTTCACAGAACGAGCTCCAGGCGGCCGGCGGGGGG---GATGCGGAGGCCAGCAGGTGGAAGCC-AGTGTTTAGAGCCACAGACAGACGTG-CCCTCAGCACCTTCCGGTTTGTGCCAGCCCAGAGACGCTGCC- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 284838 258 + 6586416 CACTAGCTGCCAGCATTTCCTGGGGCGGTCC-TGAGAGGGTGTGCAGCTGGCGCACGAGGCGAACGGCAACGCCAAGGACAAAATTACA-CAAGGAACGTGCAAGAGTTCCA--------------------CT------AATTCACACACAACCAGCTTCACAGAACGAGCTCCAGGCGGCCGGCGGGAGG---GATGTGGAGGCCAGCAGGTGGAAGCC-AGTGTTTACAGCCACAGACAGAGACG-CCCTCAGCACCTTCCCGTTTGTGCCAGCCCAGAGACGCTGCC- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11651 272 + 138751 CACTAGCTGCCAGTGTTTCCTGGGGCAGTCA-TGAGAGGGCCTGCAGCTGCAGCACAAGACGAAC-GCAATGCTAAGAACAAAGTTACA-CAAAGAATGTGTCAGAGTTCCACTGTTGACAGTGGGAATCACCT------AAG------ACAATTCACATAACAGAATGACCTCCAGACAGCTGGCTGCAGG---GACGTGGAGGCTAGCAGGTGGAAGTCAAGTGTTTAGAGCCACAGGTAGACATG-GTCTCAGCACCTTCCTGTTTGTCCCAGCCCAGAGGCGCTGTC- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 491171 271 - 2125214 CACTAGCTGCCAGTGTTTCCTGGGGCGGTCG-CGAGAGGGTCTGCAGCTGCCGCACAAGGCGAAC-GCAATGCTGAGAACAAAGTTACA-CAAAGAATGTGTCAGAGTTCCACTGTTCACAGTGGGAATCACCT------AAG------ACAATTCACACCACAGAATGAGCTCCAGGCAGCTGGCTGCAGG---GACGCGGAGGCCAGCAGGTGGAAGTC-AGTGTTTAGAGCCACAGGTAGACATG-GTCTCAGCACCTTCCCATTTGTCCCAGCCCAGAGGCGCTGTC- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 98571 261 + 376347 CACCAGCTGC--GTGTTTCCCGGGGCGGTCG-CGAGAGGATCTGCAGCTGCCGCACAAGGCGAAA-GCAATGCCAAGAACAAAGTTACA-CGGGGAACGTGTCAGAGTTCCACTG-TCACAGTGGGAATCACCT------GAG------ACAATTCACACCACAGAATGAGCTCCA-------GGCTGCAGG---GACGCGGAGGTCAGCAGGTGGAAGTC-AGTGTTTGGAGCCGCAGGTAGGCATG-GTCTCAGCACCTTCCCGTCTGTCCCAGCCCAGAGGCGCTGTC- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2228805 232 - 8137123 CATAAACTGTCAG--TTTTTGGAGACAGTCTGTGAGAGGCTCTGCAGTTGGC-----------AC-ACAATATTAAGGACCAAATTACA-CCCAGAATTTGTTTGCATACCGCTGTTCAT-GCTGGACTCACCTCAGGTGAATCCACATCAGTGCAGCTCCACAGCA----------------------AGG--------GGAGGTCAGCC--TGGAAG---AGTG---------ACCAGTGGACACACCCCTCAGCACCACCCTCCTTGGCCCCGGCCAGAGGCACCCTCC i otoGar3.GL873611 I 2554 C 0 e canFam3.chr6 61023060 486 - 77573801 I e saiBol1.JH378296 347024 3 - 2409723 I a score=701359.000000 s hg38.chr7_KI270899v1_alt 123639 76 + 190869 TGAGCACAC----CACCTGGGGAGGCTGCAGGTCTAAGCAGCCTGAAAGTGACCCTCACCAGGCCCTGAAGCCACCACTG s panTro5.chr7_NW_015973503v1_random 1470 76 + 11459 TGAGCACAC----CACCTGGGGAGGCTGCAGGTCTAACCAGCCTGAAAGTGACCCTCACCAGGCCCTGAAGCCACCACTG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 84386 76 - 432965 TGAGCACAC----CACCTGGGGAGGCTGTAGGTCTAACCAGCCTGAAAGTGACCCTCACCAGGCCCTGAAGCCACCACTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 142495 76 + 85365473 TGAGCACAC----CGCCTGGGGAGGCTACAGGTCCAACCAGCCTGAAAGTGACCCTCACCAGGCCCTGAAGCCACCACTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33989742 76 + 185818997 TGAGCACAC----CGCTGGGGAAGGCTGCCGGTCTAACCAGCCTGGAAGTGACCCTCACCAGGCCCTGAAGCCACCACTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33606311 76 + 192294377 TGAGCACAC----CGCTGGGGAAGGCTGCCGGTCTAACCAGCCTGGAAGTGACCCTCACCAGGCCCTGAAGCCACCACTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4372158 76 - 9440265 AGAGCACAC----TGCTGGGGGAGGCTGCCGGTCTAACCAGCCTGGAAGTGACCCTCACTAGGCCCTGAAGCCACCACTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960669 76 - 21915920 TGAGCACAC----CGCTGGGGGAGGCTGCCGGTCTAACCAGCCTGGAAGTGACCCTCACCAGGCCCTGAAGCCACCACTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96852 76 - 21531802 TGAGCACAC----CGCTGGGGGAGGCTGCCGGTCTAACCAGCCTGGAAGTGACCCTCAGCAGGCCCTGAAGCCACCACTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 121016 76 - 2515279 TGAGCACAC----CGCTGGGGGAGGCTGCTGGTCTAACCAGCCTGGAAGTGACCCTCACCAGGCCCTGAAGCCACCACTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 285096 76 + 6586416 TGAGCACAC----CGCTGGGGGAGGCTGCCGGTCTAACCAGCCTGGAGGTGACCCTCACCAGGCCTTGAAGCCACCACTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11923 76 + 138751 TGAGCACAC----CACCTGGGGAGGGGGCAGGTCTAACCAGCCTGAAAGTGACCCTCGCCAGGCCCTGCAGCCACCACTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 347027 76 - 2409723 TGAGCACAC----CACCTGGGGAGGGGACAGGTCTAACCAGCCTGAAAGTGACCCTCACCAGGCCCTGCAGCCACGACTG i saiBol1.JH378296 I 3 C 0 s cebCap1.NW_016107703v1 491442 76 - 2125214 TGAGCACAC----CACCTGGGGAGGGGGCAGGTCTAACCAGCCTGAAAGTGACCCTCACCAGGCCCTGCAGCCACGACTG i cebCap1.NW_016107703v1 C 0 I 189 s aotNan1.NW_018514293v1 98832 76 + 376347 TGAGCATAC----CACCTGGGGAGAGGGCAGGTCTAACCAGCCTGAAAGCGACACTCGCCAGGCCCTGCAGCCACCACTG i aotNan1.NW_018514293v1 C 0 I 101 s otoGar3.GL873611 2229037 79 - 8137123 TGAACATGCCCTGCCCGTGGAGAGGCTGTAGATCTAACTAGCCTGAATTTGACCCTTATCCGGCCCTGAAGCCATC-CAG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61023060 486 - 77573801 I a score=77944.000000 s hg38.chr7_KI270899v1_alt 123715 16 + 190869 GGTCGGG-GGCCCA--------------------------------GCC- s panTro5.chr7_NW_015973503v1_random 1546 16 + 11459 GGTCGGG-GGCCCA--------------------------------GCC- i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 84462 16 - 432965 GGTCAGG-GGCCCA--------------------------------GCC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 142571 16 + 85365473 GGTCAGG-GGCCCA--------------------------------GCC- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33989818 16 + 185818997 CGTCAGG-GGTCCA--------------------------------GCC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33606387 16 + 192294377 CGTCAGG-GGTCCA--------------------------------GCC- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4372234 16 - 9440265 CGTCAGG-GGTCCA--------------------------------GCC- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960745 16 - 21915920 CGTCAGG-GGTCCA--------------------------------GCC- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96928 16 - 21531802 GGTCAGG-GGTCCA--------------------------------GCC- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 121092 16 - 2515279 CGTCAGG-GGTCCA--------------------------------GCC- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 285172 16 + 6586416 CGTCAGG-GGTCCA--------------------------------GCC- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 11999 16 + 138751 CGGAAGA-GACCCA--------------------------------GCC- i calJac3.chrUn_GL286444 C 0 I 173 s saiBol1.JH378296 347103 16 - 2409723 CGGAAGT-GGCCCA--------------------------------GCC- i saiBol1.JH378296 C 0 I 214 s otoGar3.GL873611 2229116 49 - 8137123 -GTCAGGAGGCCCATTTGTGCCTCTCAGAGGGCAGGTGTAGGTGGTGCCC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61023060 486 - 77573801 I e aotNan1.NW_018514293v1 98908 101 + 376347 I e cebCap1.NW_016107703v1 491518 189 - 2125214 I a score=68786.000000 s hg38.chr7_KI270899v1_alt 123731 7 + 190869 TTCCTTC s panTro5.chr7_NW_015973503v1_random 1562 7 + 11459 TTCCTTC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 84478 7 - 432965 TTCCTTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 142587 7 + 85365473 TTCCTTC i nomLeu3.chr20 C 0 I 112 s rheMac8.chr3 33989834 7 + 185818997 TTCCTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33606403 7 + 192294377 TTCCTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4372250 7 - 9440265 TTCCTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960761 7 - 21915920 TTCCTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96944 7 - 21531802 TTCCTTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 121108 7 - 2515279 TTCCTTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 285188 7 + 6586416 TTCCTTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 12188 7 + 138751 TTCTTTC i calJac3.chrUn_GL286444 I 173 C 0 s saiBol1.JH378296 347333 7 - 2409723 TTCTTTC i saiBol1.JH378296 I 214 C 0 s cebCap1.NW_016107703v1 491707 7 - 2125214 TTCTTTC i cebCap1.NW_016107703v1 I 189 C 0 s aotNan1.NW_018514293v1 99009 7 + 376347 TTCTTTC i aotNan1.NW_018514293v1 I 101 C 0 s otoGar3.GL873611 2229165 7 - 8137123 CTCATTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61023060 486 - 77573801 I a score=143003.000000 s hg38.chr7_KI270899v1_alt 123738 19 + 190869 CAGTGCAGGGGCCCCACCC s panTro5.chr7_NW_015973503v1_random 1569 19 + 11459 CAGTGCAGGGGCCCCACCC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 84485 19 - 432965 CAGTGCAGGGGCCCCACCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 142706 19 + 85365473 CAGTGCAGGGGCCCCACCC i nomLeu3.chr20 I 112 C 0 s rheMac8.chr3 33989841 18 + 185818997 CAGGGCA-GGGCCGCACCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33606410 18 + 192294377 CAGGGCA-GGGCCGCACCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4372257 18 - 9440265 CAGGGCA-GGGCCGCACCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960768 18 - 21915920 CAGGGCA-GGGCCGCACCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96951 19 - 21531802 CAGGGCAGGGGCCGCACCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 121115 18 - 2515279 CAGGGCA-GGGCCGCACCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 285195 19 + 6586416 CAGTGCAGGGGCCACACCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 12195 19 + 138751 CAGAGCAGAGGCCCCACCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 347340 19 - 2409723 CAGAGCAGGAGCCCCACCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 491714 19 - 2125214 CAGAGCAGGGGCCCCACCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 99016 19 + 376347 CAGTGAAGAGGCCCCGCCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2229172 19 - 8137123 CAGTGCAGGCCACCCACCC i otoGar3.GL873611 C 0 I 3154 e canFam3.chr6 61023060 486 - 77573801 I a score=4094775.000000 s hg38.chr7_KI270899v1_alt 123757 543 + 190869 CAGCCGACTGCAGACTCAGGGTGCAAGCTTCCTCTGCTTGGGTACTCCTCGAGGTCCTCCTGGGCGTCCTGAGCTCCTCTGTGTGCATTTCCTATGCTGTTCACAGTCCTACTGCATGGCCCAggagggaaa----------ggg-----aggggaggggaggaggagaagggaCTCTCCTTGCTCCCAAACTGCTGAACACTCAGCATCTGCCTCCTTTCTCAGCCAAAGGAAGGCCCTCGCCAAACACTCCTGACTATTGCAGTTGCTGGTCACCTACTCCTGTCCCACTCAATGGCT-GCCCCCCGTCAGCCACCTGTGGCCCAGTGATCAGCTCACCTCCTGCACACACCATGTGGGC-AGCTCACCAAGCCACCCTCCCCACCATTTCCAGGAAGGGCCAGGACTCACAGAAAACAGGCTTGTTTGTGAGCCACGCGGTCACTTACACTTTGCAAAGCGGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCGAGGCTTGGAACACACCCAGCCGGCAGCTGTCTGCTCCACTCGCTCCTCTGTTTTGGGGAAGGGC s panTro5.chr7_NW_015973503v1_random 1588 543 + 11459 CAGCCGACTGCAGACTCAGGGTGCAAGCTTCCTCTGCTTGGGTACCCCTCGAGGTCCTCCTGGGCGTCCTGAGCTCCTCTGTGTGCATTTCCTATGCTGTTCACAGTCCTACTGCATGGCCCAggagggaaa----------ggg-----aggggaggggaggaggagaagggaCTCTCCTTGCTCCCAAACTGCTGAACACTCAGCATCTGCCTCCTTTCTCAGCCAAAGGAAGGCGCTCGCCAAACACTCCTGACTATTGCAGTTGCTGGTCACCTACTCCTGTCCCACTCAATGGCT-GCCCCCCGTCAGCCACCTGTGGCCCAGTGATCAGCTCACCTCCTGCACACACCGTGTGGGC-AGCTCACCAAGCCGCCCTCCCCACCATTTCCAGGAAGGGCCAGGACTCACAGAAAACAGGCTTGTTTGTGAGCCACGCGGTCACTTACACTTTGCAAAGCGGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCGAGGCTTGGAACACACCCAGCCGGCAGCTGTCTGCTCCACTCGCTCCTCTGTTTTGGGGAAGGGC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 84504 543 - 432965 CAGCCGACTGCAGACTCAGGGTGCAAGCTTCCTCTGCATGGGTACTCCTCCAGGTCCTCCTGGGCGTCCTGAGCTCCTCTGTGTGCATTTCCTATGCTGTTCACTGTCCTACTGCATGGCCCAggagggaaa----------ggg-----aggggaggggaggaggaCAAGGGACTCTCCTTGCTCCCAAACTGCTGAACACTCAGCATCTGCCTCCTTTCTCAGCCAAAAGAAGGCCCTCGCCAAACACTCCTGACTATTGCAGTTGCTGGTCACCTACTCCTGTCCCACTCAATGGCT-GCCCCCCGTCAGCCGCCTGTGGCCCAGTGATCAGCTCACCTCCTGCACACACCGTGTGGGC-AGCTCACCAAGCCGCCCTCCCCACCATTTCCAGGAAGGGCCAGGACTCACAGAGAACAGGCATGTTTGTGAGCCACGCGGTCACTTACACTTTGCAAAGCGGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCGAGGCTTGGAACACACCCAGCTGGCAGCTGTCTGCTCCACCCGCTCCTCTGTTTTGGGGAAGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 142725 553 + 85365473 CAGCCGACTGCAGACTCGGGGTGCAAGCTTCCTCTTCATGGGTACTCCTCGAGGTCCTCCTTGACGTCCTGAGCTCCTCTGTGTGCATTTCCTATGCTGTTCACAGCCCTACTGCATGGCCCAGGAGGGAAAgggaggggagggg-----aggggaggggaggaggagAAGGGACCCTCCTTGCTCCCAAACTGCTGAACACTTGGCATCTGCCCCCTTTCTCAGCCAAAGGAAGGCCCTCGCCAAACATTCCTGACTATTGCAGTTGCTGGTCACCTACTCCTGTCCCACTCAATGGCT-GCCCACCCTCAGCTGCCTGTGGCCCAGTGACCAGCTCACCTCCTGCACACACCATGTGGGC-AGCTCACCAAGCCGCCCTCCCCACCACTTCCAGGAAGGGCCAGGACTCCCAGAAAATAGGCATGTTTGTGAGCCACGTGGTCACTTACACTTTGCAAAGCGGCGTGGACGC--TTCTATTCTGAAGCATCCGCCGAGGCTTGGAACACACCCAGCCGACAGCCGTCTGCTCCACCGGCTCCTCTGTTTGGGGGAAGGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33989859 531 + 185818997 TGGCCGACTGCAGACTC-GGGTGCAAACATCCTCTCCATGGCTACTCCTCGAGGTCCTCCTGGACGTCCTGAGCTCCTCCGTGTGCATTTCCTGTGCTGCTCACAGG-CAACTGCATCGCCCAGGACGGAAG----------GGG-----CAGGGAGGGGAGGAGGAGAAGGGACGCTCCTTGCTCCCAAACTGCTGGACACTCGGCATCTGCCTCCTTCCTCAGTCAAAGGCAGGCCCTGGCCAAACGTTCCTGACTACTGCAGTTGCTGGTCACTTATTCCTGTCCCACTCAGTGGCT-GCCACCC-TCAGCCGCCTGTGGCCTAGTGATCAGCTCACCTCCTGTACACACCGTGTGGGC-AGCTCGCCAGGCTGCTCTCCCCACCACTTCCAGGAAGGGCCTGGACTCCCAGAAAACAGGCATGTTGGGGAGCCACGCAGT------CACTGTGCAAAGCAGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCAAGTCTTGGAACACGCCCAGCCGGCAGCCGTCTGCTCCACTGG---CTCTGTTCTGGGGAAGGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33606428 531 + 192294377 TGGCCGACTGCAGACTC-GGGTGCAAACATCCTCTCCATGGCTACTCCTCGAGGTCCTCCTGGACGTCCTGAGCTCCTCCGTGTGCATTTCCTGTGCTGCTCACAGG-CTACTGCATCGCCCAGGACGGAAG----------GGG-----CAGGGAGGGGAGGAGGAGAAGGGACGCTCCTTGCTCCCAAACTGCTGGACACTCGGCATCTGCCTCCTTCCTCAGTCAAAGGCAGGCCCTGGCCAAACGTTCCTGACTACTGCAGTTGCTGGTCACTTATTCCTGTCCCACTCAGTGGCT-GCCACCC-TCAGCCGCCTGTGGCCTAGTGATCAGCTCACCTCCTGTACACACCGTGTGGGC-AGCTCGCCAGGCCGCTCTCCCCACCACTTCCAGGAAGGGCCTGGACTCCCAGAAAACAGGCATGTTGGGGAGCCACGCAGT------CACTGTGCAAAGCAGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCAAGTCTTGGAACACGCCCAGCCGGCAGCCGTCTGCTCCACTGG---CTCTGTTCTGGGGAAGGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4372275 531 - 9440265 TGGCCGACTGCAGACTC-GGGTGCAAACATCCTCTCCATGGCTACTCCTCGAGGTCCTCCTGGACGTCCTGAGCTCCTCCGTGTGCATTTCCTGTGCTGCTCACAGG-CTACTGCATCGCCCAGGATGGAAG----------GGG-----CAGGGAGGGGAGGAGGAGAAGGGACGCTCCTTGCTCCCAAACTGCTGGACACTCGGCATCTGCCTCCTTCCTCAGTCAAAGGCAGGCCCTGGCCAAACGTTCCTGACTACTGCAGTTGCTGGTCACTTATTCCTGTCCCACTCAGTGGCT-GCCACCC-TCAGCCGCCTGTGGCCTAGTGATCAGCTCACCTCCTGTACACACCGTGTGGGC-AGCTCGCCAGGCCACTCTCCCCACCACTTCCAGGAAGGGCCTGGACTCCCAGAAAACAGGCATGTTGGGGAGCCACGCAGT------CACTGTGCAAAGCAGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCAAGGCTTGGAACACGCCCAGCCGGCAGCCGTCTGCTCCACTGG---CTCTGTTCTGGGGAAGGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16960786 531 - 21915920 TGGCCGACTGCAGACTC-GGGTGCAAGCATCCTCTCCATGGCTACTCCTCGAGGTCCTCCTGGACGTCCTGAGCTCCTCCGTGTGCATTTCCTGTGCTGTTCACAGG-CTACTGCATCGCCCAGGACGGAAG----------GGG-----CAGGGAGGGGAGGAGGAGAAGGGACGCTCCTTGCTCCCAAACTGCTGGACACTTGGCATCTGCCTCCTTCCTCAGTCAAAGGCAGGCCCTGGCCAAACGTTCCTGACTACTGCAGTTGCTGGTCACTTATTCCTGTCCCACTCAGTGGCT-GCCACCC-TCAGCCGCCTGTGGCCCAGTGATCAGCTCACCTCCTGTACACACCGTGTGGGC-AGCTCGCCAGGCCGCTCTCCCCACCACTTCCAGGAAGGGCCTAGACTCCCAGAAAACAGGCATGTTGGGGAGCTACGCAGT------CACTGTGCAAAGCAGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCAAGGCTTGGAACACGCCCAGCCGGCAGCCGTCTGCTCCACTGG---CTCTGTTCTGGGGAAGGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 96970 534 - 21531802 TGGCCGACTGCAGACTC-AGGCGCAAGCATCCTCTCCATGGCTACTCCCCGAGGTCCTCCTGGACATCCTGAGCTCCTCCGTGTGCATTTCCTGGGCTGTTCACAGG-CTACTGCATGGCCCAggagggaag----------ggg-----cggggaggggaggaggagAAGGGACGTTCCTTGCTCCCAAACTGCCGGACACTCGGCATCCGCCTCCTTCCTCAGCCAAAGGCAGGCCCTGGCCAAACGTTCCTGACTACTGCAGTTGCTGGTCACTTATTCCTGTCCCACTCAGTGGCT-GCCACCC-TCAGCCGCCTGTGACCCAGTGATCAGCTCACCTCCTGCACACACCGTGTGGGC-AGCTCGCCAGGTCGCCCTCCCCACCACTTCCAGGAAGGCCCAGGACTCCCAGAAAACAGGCATGTTTGGGAGCCACGCGGT------CACTGTGCAAAGCAGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCGAGGCTTGGAACACGCCCAGCCGGCAGCCGTCTGCTCCACCGGCTCCTCTGTGCTGGGGAAGGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 121133 531 - 2515279 TGGCCGACTGCAGACTC-GGGTGCAAGCATCCACTCCATGGCTACTCCTCGAGGTCCTCCTGGACGTCCTGAACTCCTCCGTGTGCATTTCCTGTGCTGTTCACAGG-CTACTGCATCGCCCAGGACGGAAG----------GGG-----CAGGGAGGGGAGGAGGAGAAGGGACGCTTCTTGCTCCCAAACTGCTGGACACTCGGCATCTGCCTCCTTCCTCAGTCAAAGGCAGGCCCTGGCCAAACGTTCCTGACTACTGCAGTTGCTGGTCACTTATTCCTGTCCCACTCAGTGGCT-GCCACCC-TCAGCCGCCTGTGGCCCAGTGATCAGCTCACCTCCTGTACACACCGTGTGGGC-GGCTCGCCAGGCCGCTCTCCCCACCACTTCCAGGAAGGGCCTGGACTCCCAGAAAACAGGCATGTTGGGGAGCCACGCAGT------CACTGTGCAAAGCAGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCAAGGCTTGGAACACGCCCAGCCGGCAGCCGTCTGCTCCACTGG---CTCTGTTCTGGGGAAGGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 285214 532 + 6586416 TGGCCAACTGCAGACTC-GGGTGCAAGCGTCCTCTCCATGGCTACTCCTCGAGGTCCTCCTGGACGCCCTGAGCTCCTCCGTGTGCATTTTCTGTGCTGTTCACAGG-CTACTGCATGGCCCAggagagaag----------ggg-----cggggaggggagggggagaagggACTCTCCTTGCTCTCAAACTGCTGGACACTCGGCATCCGCCTCCTTCCTCAGCCAAAGGCAGGCCCTGGCCAAACGTTCCTGACTACTGCAGTTGCTGGTCACTTATTCCTGTCCCACTCAGTGGCT-GCCACCC-TCAGCCTCCTGCGGCCCAGTGATCAGCTCACCTCCTGCACACACCGTGTAGGCAAGCTCTCCAGGCCGCCCTCCCCACCACTTCCAGGAAGGGCCAGGACTCCCAGAAAACAGGCGTGTTTGGGAGCCACGCGGT------CACTGTGCAAAGCAGCGTGGGCGC--TTCTATTCTGAAGCATCCGCCGAGGCTTGGAACACGCCCAGCCGGCAGCCGTCTGCTCCACCGG---CTCTGTTCTGGGGAAGGGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 12214 530 + 138751 CAGCCCACCACAGACTTGGGGTGCAAGCCTTCTCTTCACGGGTACTCCTCAAGGTCTTCCTGGACATCCCAAGCTCCTCTGGGTGCATTTTCTGTGCTGTCTGCAGGCCCACTGCATGGCCCAGGAGAAAAA----------AGG-----GAGGGGAGGGGAGGAGAGTAGAGACCCTTCTTGCTCCCAAACTGCTGAATACTCAGCACCCGCCTCCTTTCTCAGTCAAAGGAAGGCCCTCACCAAACATCCCTGACACTCGAAGGTGCTGTTCACTTATTCCTGACCCACTCAGTGGCTGGTCACCC-TCAGCCACCTGTGGTCCAGTGATCAGCTGA---CCTGCACATGCCGTGTGGGT-AGCTTGTCAAGCCGCCCTGCCCACTGTTTCCAGGAAGGGCCAGGACTCCCAGAAAACAGGCAGGTTTGTAAACCACGCTGTCACTTACACTTTGCAAAGCAGCACAGGTGCACTTCTACTCTGAAGCATCTGCTGAGGCCTTGAACACACCCAGCAGGCTGCCATCTG------------CTCTGTTTTGGGGAAAGGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 347359 519 - 2409723 CAGCCCACCACAGACTCGGGGTGCAAGCCTCCTCTTCACGGGTACTCCTCGAGGTCTTCCTGGACGTCCCGAGTTCCTCTGGGTGCATTTTCTGTGCTGTTCACAGGCCCACTGCATGGCCCAGGAGGGAAA----------AGG-----GAAGGGAGGGAAGGAGAGTAGGGACCCTTCTTGCTCCCAAACCGCTGAATACTCAGCATCCACCTCCTTTCTCGTTCAAAGGAAGGCCCTCGCCAAACATCCCTGACTCTCGAAGGTGCTGTTCACTTATTCCTGACCCAATCAGTGGCTGGTCACCC-CCAGCTGCCTGTGGCCCAGTGATCGGCTGACCTCCTGCACACACCATGTGGGT-AGCTTGGCAAGCCACCCTCCCCACTGTTTCCAGGAAGGGCCAGGACTCCCAGAAAACAGGCAGGTTTGTGAGCCAGGCTGACACTTACGCTTTGCAAAGCAGCAGGGGTGC--------------GCATCTGCCGAGGCCTGGAACACACCCAGCGGGCAGCCGTCTG------------CTCTGTTTtgggcaagggc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 491733 538 - 2125214 CAGCCCACCACAGACTTGGGGTGCAAGCCTCCTATTCACGGGTGCTCCTCGAGGTCTTCCTGGACGTCCTGAGCTCCTCTGGGTGCATTTTCTGTGCTGTTCACAGGCCCACTGCATGGCCCAggagggaaa----------agggaggcgaggggaggggaggagagTAGGGACCCTTCTTGCTCCCAAACTGATGAATACTCAGCATTCACCTCCTTTCTCATTCAAAGGAAGGCCCTCACCAAACATCCCTGACTCTCGAAGGTGCTGTGCACTTATTCCTGATCCACTCAGTGGCTGGTCACCC-TCAGCTGCCTGTAGCCCAGTGATCGGCTGACCTCCTGCACACGCCATGTGGGT-AGCTTGCCAAGCCGCCCTCCCCACTGTTTCCAGGAAGAGCCAGGACACCCAGAAAACAGGCAGGTTTGTGAGCCACACTGTCACTTACACTTCGCAAAGCAACATGGGTGCGCTTCTACTCTGAAGCATCTGCCGAGGCCTGGAACACACCCAGCGGGCAGCCGTCTG------------CTCTGTTTTGGGGAAGGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 99035 496 + 376347 CAGCCCACCACAGACTCGGGGTGCAAGCCTCCTCTTCACGGGTACTCCTCGAGGTCTTCCTGGACATCCCAAGCTCCTCTGGGTGCATTTTCTGTGCTGTTCACAGGCCCACTGCATGGCCCAGCAGGGAAA----------AGG-----GAGGGGAGGGGAGGAGAGTAGGGACACTTCTTGCTCCCAAACTGCTGAATACTCAGCATCCGCCTCCTTTCTCGGTCAAAGGCAGGCCCTGACCAAACATCCCTGACTCTCGAAGGTGCTGTTCACTTATTCCTGACCCACTCAGTGGCCCGTCGCCC-TCAGGCGCCTGTGTCCCAGTGATCGGCTGACCTCCTGCACACGCCGGGTGGGT-AACTTGCCAAGCCGCCCTCCCCACT-------------------------------------GGTTTGTGAGCCACGCTGTCACTTACACTTTGCAAAGCAGCACGGGTGCGTTTCTACTCTGAAGCATCTGCCGAGGCCTGGAACACACTCAGAGGGCAGCCGTCTG------------CTCTGTTTAGGGGAAGGGC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2229191 3154 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I a score=1565255.000000 s hg38.chr7_KI270899v1_alt 124300 227 + 190869 CTCTGGCAGAGGGAGTATGAGGCCTGTGGTTCTGACGGGAGGAACAAGGGTGTCTGAGGGACCAGGGAGGAGGGTGGGAGACTGTCAGGGGGACTTGCAGACCACAGTATTCATTTCTTACAGCCCCCGGACaatgtggcagcttgaacaaca-cccatgtattatcacagtcggagagggttggctcagcggggtactctgctctcataggccaaagtcaaggtgcc s panTro5.chr7_NW_015973503v1_random 2131 227 + 11459 CTCTGGCAGAGGGAGTATGAGGCCTGTGGTTCTGACGGGAGGAACAAGGGTGTCTGAGGGACCAGGGAGGAGGGTGGGAGACTGTCAGGGGGACTTGCAGACCACAGTATTCATTTCTTACAGCCCCCGGACaatgtggcagcttgaacaaca-cccatgtattatcacagtcggagagggttggctcagcggggtactctgctctcataggccaaagtcaaggtgcc i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85047 226 - 432965 C-CTGGCAGAGGGAGTATGAGGCCTGTGGTTCTGACGGGAGGAACAAGGGTGTCTGAGAGACCAGGGAGGAGGGTGGGAGACTGTCA-GGGGACTTGTAGACCACGGTATTCATTTCTTACAGCCCCCGGACaatgtggcagcttgaacaacaccccatgtattatcacagtcggagagggttggctcagtggggtcctctgctctcataggccaaagtcaaggtgcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 143278 227 + 85365473 CTCTGGCAGAGGGAGTATGAGGCCTACGGCCCTAACAGGAGGAACAAGGGTGTCTGAGGGACCAGGGAGGAGGGTGGGAGACTGTCAGGGGGACTTGCAGACCACGGTATTCATTTCTTACAGCCCCCGGACaacgtggcagcttgaacgaca-tccaggtattatcacagtcagagagggttggctccgaggggtcctctgctctcacaggccgaagtcaaggtgcc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33990390 224 + 185818997 CTCTGGCAGAGGGAGTATGAGGCCTGTGGCTCTGACAGGAAGAACAAGGCTGTGTGAGGGACCAGGGAGGAGGGTGGGAGGCTGTTG-GGGGGCTTGCAGACCACGGTATTCGTTTCTTACAGACCCCTGACACCAtggcagcttgaacaaca-cccatttat--tcacagttggagagggttggctcagcaaggtcctctgctctcacaggacaaagtccaggtgcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33606959 224 + 192294377 CTCTGGCAGAGGGAGTATGAGGCCTGTGGCTCTGACAGGAAGAACAAGGCTGTGTGAGGGACCAGGGAGGAGGGTGGGAGGCTGTCG-GGGGGCTTGCAGACCACGGTATTCGTTTCTTACAGACCCCTGACACCAtggcagcttgaacaaca-cccatttat--tcacagttggagagggttggctcagcaaggtcctctgctctcacaggacaaagtccaggtgcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4372806 224 - 9440265 CTCTGGCAGAGGGAGTATGAGGCCTGTGGCTCTGACAGGAAGAACAAGGCTGTGTGAGGGACCAGGGAGGAGGGTGGGAGGCTGTCG-GGGGGCTTGCAGACCACGGTATTCGTTTCTTACAGACCCCTGACACCAtggcagcttgaacaaca-cccatttat--tcacagttggagagggttggctcagcaaggtcctctgctctcacaggccaaagtccaggtgcc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16961317 224 - 21915920 CTCTGGCAGAGGGAGTATGAGGCCTGTGGCTCTGACAGGAAGAACAAGGCTGTGTGAGGGACCAGGGAGGAGGGTGGGAGGCTGTCA-GGGGGCTTGCAGACCACGGTATTCGTTTCTTACAGATCCCTGACACCAtggcagcttgaacaaca-cccatttat--tcacagttggagagggttggctcagcagggtcctctgctctcacaggccaaagtccaggtgcc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 97504 223 - 21531802 CTCTGGCAGAGGGAGTACGAGACCTGTGGCTCTGACGGGAAGAACAAGGCTGTGTGAGGGAACAGGGAGGAGGGTGGGAGGCTGCC--GGGGGCTTGCAGACCACAGTATTCATTTCTTACAGCCCCCCGACACCGCGgcagcttgaacaaca-cccatttat--tcacagttggagagggctggctcagcagggtcctctgctctcacaggccaaagtccaggtgcc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 121664 224 - 2515279 CTCTGGCAGAGGGAGTATGAGGCCTGTGGCTCTGACAGGAAGAACAAGGCTGTGTGAGGGACCAGGGAGGAGGGTGGGAGGCTGTCG-GGGGGCTTGCAGACCACGGTATTCATTTCTTACAGACCCCTGACACCAtggcagcttgaacaaca-cccatttat--tcacagttggagagggttggcttagcagggtcctctgctctcacaggccaaagtccaggtgct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 285746 224 + 6586416 CTCTGGCAGAGGGAGTACGAGGCCTGTGGCTCTGACGGGAAGAAGGAGGCTGTCTGAGGGACCAGGGAGGAGGGTGGGAGGCTGTCG-GGGGGCTTGCAGACCACGGTATTCATTTCTTACAGCCCCCCGACACGGtggcagcttgaacaaca-cccagttat--gcacagttggggagggctggctcagcagggtcctctgctctcacaggccaaagtccaggtgcc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 12744 227 + 138751 CTCTGGCAGAGGGAGTACCAGGCCTGCGGCTCTGACAGGAAGAACAAGGGTGTCTGAGGGACCAGGGAGGAGGCTGGGAGACAGTCAAGGGGACTTGTAGACCATGGTATTCATTCCTTACTGCCCCTGGACAATGTGGCAGCCTGAACAACA-CCCATTTATTACAGCAGTTGGAGAGGGTTGGCTCAGCAGGGTCCTTTGCTCTCACAGGTCAAAGTGAAGGTGAT i calJac3.chrUn_GL286444 C 0 I 8 s cebCap1.NW_016107703v1 492271 225 - 2125214 CTCTGACAGAGGGAGTACCAGGCCTGCAGCTCTGATGGGAAGAACAAGGGTGTCTGAGGGACCAGGGAGGAGGCTGGAAG--AGTCAGGGGGACTTGCAGACCACGGTATTCATTTCTTACTGCCCCTGGACAATGTGGCAGCCTGAACAACA-CCCATTTATTACAGCAGTTGGAGAAGGTTGGCTCAGTGGGGTCCTTTGTTCTTGCAGGTCAAAGTGAAGGTGGC i cebCap1.NW_016107703v1 C 0 I 8 s aotNan1.NW_018514293v1 99531 227 + 376347 CTCTGGCAGAGGGAGTACCAGGCCTGCGGCTCTGACGGGAAGAACAAGGGTGTCTGAGGGACCAGGGAGGAGGCTGGGAGACAGTCAGGGGGACTTGCAGACTACGGTATTCATTTCTTACTGCCCCTGGACAATGTGGCAGCCTGGACGACA-CCCATTTATCACAGCAGTTGGAGACGGTGGGCTCAGCGGGGTCCTTCGCTCTCGCAGGTCGAAGTGAAGGTGTT i aotNan1.NW_018514293v1 C 0 I 49 e otoGar3.GL873611 2229191 3154 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C a score=6775.000000 s hg38.chr7_KI270899v1_alt 124527 9 + 190869 ----------agtgggccg--------------- s panTro5.chr7_NW_015973503v1_random 2358 9 + 11459 ----------agtgggccg--------------- i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85273 8 - 432965 ----------agt-ggcca--------------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 143505 9 + 85365473 ----------ggtgggctg--------------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33990614 9 + 185818997 ----------ggtggatgg--------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607183 9 + 192294377 ----------ggtggatgg--------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373030 9 - 9440265 ----------ggtggatgg--------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16961541 9 - 21915920 ----------ggtggatgg--------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 97727 9 - 21531802 ----------ggtggatgg--------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 121888 9 - 2515279 ----------ggtggatgg--------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 285970 9 + 6586416 ----------tgtggacgg--------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 12979 34 + 138751 ATGGTGGGGGAGGGGGTGGTGCTCTTGTGGGTGA i calJac3.chrUn_GL286444 I 8 C 0 s cebCap1.NW_016107703v1 492504 34 - 2125214 ATGGTGGGGGAGGGGGCGGTGCTATTGCGGGTGA i cebCap1.NW_016107703v1 I 8 C 0 e otoGar3.GL873611 2229191 3154 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e aotNan1.NW_018514293v1 99758 49 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1043485.000000 s hg38.chr7_KI270899v1_alt 124536 150 + 190869 tgctcttgtctggggctcgaggaaagaacatgcttcaggctcactgggggctagaggacttctccctgtggctgagggacagaggccccactcccctgtgggctgtcagctcaaggctggctgcatc-cgccttctcaaagccagcaaggg s panTro5.chr7_NW_015973503v1_random 2367 150 + 11459 tgctgttgtctggggctcgaggaaagaacatgcttcaggctcactggggactagaggacttctccctgtggctgagggacaggggccccactcccctgtgggctgtcagctcaaggctggctgcatc-cgccttctcaaagccagcaaggg i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85281 149 - 432965 tgctcttgtctggggctggaggaaagaacatgcttcaggctcactgggg-ctagaggacttctccctgtggctgagggacagaggccccactcccctgtgggctgtcagctcaaggctggctgcatc-caccttctcaaagccagcaaggg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 143514 148 + 85365473 tgctcttgtctggggctggaggaaagaacaggcttcaggctcactgggggctagaggacttctccc--tggctgaaggacagaggccccactccgctgcgggctgtcagctcaaagctggctgcatc-cgccttctcaaagccagcaaggg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33990623 148 + 185818997 tgctcttgtctggggctggagggaagaaagtgcttcaggctcacggggggctagaggac-tctccctgtgactgaaggacagaggccccactcccctgagggccgtcagcTCCAGGATGGCTGCACC-C-CCTTCTCAAAGCCAGCAAGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607192 148 + 192294377 tgctcttgtctggggctggagggaagaacgtgcttcaggctcacggggggctagaggac-tctccctgtgactgaaggacagaggccccactcccctgagggccgtcagctccaggctggctgcacc-c-ccttctcaaagccagcaaggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373039 148 - 9440265 tgctcttgtctggggctggagggaagaacgtgcttcaggctcacggggggctagaggac-tctccctgtgactgaaggacagaggccccactcccctgagggccgtcagctcgaggctgGCTGCACC-C-CCTTCTCAAAGCCAGCAAGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16961550 149 - 21915920 tgctcttgtctggggctggagggaagaacgtgcttcaggctcacagggggctagaggac-tctccctgtgactgaaggacagaggccccactcccctgcgggccgtcagctccaggctggctgcacctc-ccttctcaaagccagcaaggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 97736 147 - 21531802 tgctcttgtctggggctggagggaagaacgtgcttcaggcccgcggggggct-gaggac-tctccctgtggctgaaggacagaggccccactcccccgcgggccgtcagctccaggctggctgcacc-c-ccttctcaaagccagcaaggg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 121897 148 - 2515279 tgctcttgtctggggctggagggaagaacgtgcttcaggctcacgggggcctagaggac-tctccctgtgactgaaggacagaggccccactcccctgcgggccgtcagctccaggctggctgcacc-c-ccttctcaaagccagcaaggg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 285979 147 + 6586416 tgctcttgtctggggctggaggaaagaaggtgcttcaggctcacggggg-ctggaggac-tctccgtgtggctgaaggacagaggccccactcccctgcgggccgtcagctcaaggctggcttcacc-c-ccttctcaaagccagcaacgg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 13013 150 + 138751 Tgctcttgtcgggggctcgaggaaagaacatgcttcagactcacttggggctacaggacttctccctgcagctgaaggatggaggccccactcccctgcaggctgtcagctcaaggctcgctgcatc-cctcttctcaaagccagcaagga i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 492538 150 - 2125214 Tgctcttgtctggggctcaaggaaagaacgtgcttcagggtcactggggactagagcacttctccctgtggctgaaggacggaggccctgctcccctgcaggctgtcagctcaaggctcactgcacc-cctcttctcaaagccagcaagga i cebCap1.NW_016107703v1 C 0 I 46 s aotNan1.NW_018514293v1 99807 150 + 376347 Tgctcttgtctggggctcaaggaaagaaagtgcttccggctcactgggggctacaggagttctccctgcggctgaaggacagaggccccactcccctgcaggctgtcagctcaaggctcggtgcatc-tctcttctcaaagccagcaagga i aotNan1.NW_018514293v1 I 49 C 0 e otoGar3.GL873611 2229191 3154 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C a score=118569.000000 s hg38.chr7_KI270899v1_alt 124686 25 + 190869 caccctgagtcctcctca--cgccgag s panTro5.chr7_NW_015973503v1_random 2517 25 + 11459 cacccagagtcttcctca--cgccgag i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85430 25 - 432965 caccctgagtcctcctca--cgccgag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 143662 25 + 85365473 caccctgagtcctcctca--tgccgag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33990771 25 + 185818997 CACCCTGAGCCCTCCTCT--TGCGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607340 25 + 192294377 caccctgagccctcctct--tgcggag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373187 25 - 9440265 CACCCTGAGCCCTCCTCT--TGCGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16961699 25 - 21915920 caccctgagccctcctct--cgcggag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 97883 24 - 21531802 c-ccctgagcgctcctct--tgccgag i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 122045 25 - 2515279 caccctgagccctcctct--cgcggag i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 286126 25 + 6586416 caccctgagccctcctct--cgtcgag i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 13163 27 + 138751 cacccagagtccaccccacccactaag i calJac3.chrUn_GL286444 C 0 I 20 s aotNan1.NW_018514293v1 99957 27 + 376347 caccccgagtccaccccacccactaag i aotNan1.NW_018514293v1 C 0 I 20 e otoGar3.GL873611 2229191 3154 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 492688 46 - 2125214 I a score=960437.000000 s hg38.chr7_KI270899v1_alt 124711 133 + 190869 tcctctctgccaccctcttccgcctgcatccagaggacgctctctgctgtcagg-------------------gctcccccagaaaccaggataacctccctcgtttaaggccAACTGTCCAGAGAACAATGTGCCTCAGGGCGGCCTCTCA s panTro5.chr7_NW_015973503v1_random 2542 133 + 11459 tcctctctgccaccctcttccgcctgcatccagaggccgctctctgctgtcagg-------------------gctcccccagaacccaggataacctccctcgtttaaggccaactgTCCAGAGAACAATGTGCCTCAGGGCGGCCTCTCA i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85455 133 - 432965 tcctctctgccaccctcttctgcctgcagccagaggacgctctctgctgtcggg-------------------gctcccccagaacccaggataacctccctcgcttaaggccaactgTCCAGAGAACAATGTGCTTCAGGGCGGCCTCTCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 143687 133 + 85365473 tgctctctgccaccctcttccacctgcagccagaggacgctctctgctgtcagg-------------------gctcccccagaacccaggagaagctccctagtttaaggccaactgTCCAGAAGACAACGTGCTTCAGGGCGGCCTCTCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33990796 133 + 185818997 TCCTCTCTGCCACCCTCTTCCACCTGCAGCCAGAGGATGCTCTCTGCCCTCAGG-------------------GCTCCCCCAGAACCCAGGATAACCTCCCTAGTTTAAGGCCAACTGTCCAGGGAACAATGTGCTTCAGGGCGGCCTCTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607365 133 + 192294377 tcctctctgccaccctcttccacctgcagccagaggatgctctctgccctcagg-------------------gctcccccagaacccaggataacctccctagtttaaggccAACTGTCCAGGGAACAATGTGCTTCAGGGCGGCCTCTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373212 133 - 9440265 TCCTCTCTGCCGCCCTCTTCCACCTGCAGCCAGAGGATGCTCTCTGCCCTCAGG-------------------GCTCCCCCAGAACCCAGGATAACCTCCCTAGTTTAAGGCCAACTGTCCAGGGAACAATGTGCTTCAGGGCGGCCTCTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16961724 133 - 21915920 tcctctctgccgccctcttccacctgcagccagaggacgctctctgccctcagg-------------------gctcccccagaacccaggataacctccctagtttaaggccaactgTCCGGGGAACAATGTGCTTCAGGGCGGCCTCTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 97907 133 - 21531802 tcctctctgccgccctcttccacctgcagccagaggacgctctctgccctcagg-------------------gcttccccagaacccaggataacctccctagcttaaggccAACTGTCCAGGGACCAATGCGCTTCAGGGCGGCCTCTCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 122070 133 - 2515279 tcctctctgccgccctcttccacctgcagccagaggacgctttctgccctcagc-------------------gctcccccagaacccaggataacctccctagtttaaggccaactgTCCAGGGAACAATGTGCTTCAGGGCGGCCTCTCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 286151 133 + 6586416 tcctctctgccgccctcttccgcctgcagccagaggacgctctctgccctcagg-------------------gCTCCCCCAGAGCCCAGGATAACCTCCCGAGTTTAAGGCCAACTGTCCAGGGAACAATGTGCTTCAGGGCAGCCTCTCA i colAng1.NW_012117710v1 C 0 I 1567 s calJac3.chrUn_GL286444 13210 150 + 138751 tcctctctgcca-cctcttccacctgcagccagaggacgctctctgctctcggggctcatgggattacactgtgctcacccagaattca-gacgacctccctggtttaaggccAACTGTCTATGAAACAATGTGCTTCAGGGTGGCCTCTCA i calJac3.chrUn_GL286444 I 20 C 0 s cebCap1.NW_016107703v1 492734 151 - 2125214 tcctctctgcca-cctcttccacctgcagccagaggacgctctctgctctcggggctcatgggattacactatgctcacccagaattcaggataacctccctggtttaaggccaactgtctatgaaacaatgtgcttcaaggtagcttctca i cebCap1.NW_016107703v1 I 46 C 0 s aotNan1.NW_018514293v1 100004 151 + 376347 tcctctctgccg-cctcttccacctgcagccagaggatgctctctgctctcggggctcacgggattacactgtgctcacccagaattcaagataacctccctggtttaaggccaactgtctgtgaaacgctgtgcttccgggtagcctctca i aotNan1.NW_018514293v1 I 20 C 0 e otoGar3.GL873611 2229191 3154 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C a score=432006.000000 s hg38.chr7_KI270899v1_alt 124844 82 + 190869 TCACACTCAAGCTTCTGGGGGTGAGTGCGGGACATCCTTGGgggcctc-----------------catagccatcgtgaaggtggcttttcctgaccta s panTro5.chr7_NW_015973503v1_random 2675 82 + 11459 TCACACTCAAGCTTCTGGGGGTGAGTGCGGGACATCCTTGGgggcctc-----------------catagccatcgtgaaggtggcttttcctgaccta i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85588 82 - 432965 TCACACTCAAGCTTCTGGGGGTGAGTGCGGGACATCCTTGGgggcctc-----------------cacagccatcgtgaatgtggcttttcctgaccta i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 143820 82 + 85365473 TCACACTCAAGCTTCCGGGGGTGAGTGTGGGACATCCTTGGGGGCCTC-----------------CACAGCCATCGCGAGCGtggcttttcctgactga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33990929 98 + 185818997 CCACACTCAAGCTTCCGAGGGCTAGCGCGGGACATCCTTGGGGGCCTCTTAGAAATTCGGCTT-TCACAGCCATGGTgacggtggcctttcctgtctga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607498 98 + 192294377 CCACACTCAAGCTTCCGAGGGCTAGCGCGGGACATCCTTGGGGGCCTCTTAGAAATTCggctt-tcacagccatggtgacggtggcctttcctgtctga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373345 98 - 9440265 CCACACTCAAGCTTCCGAGGGCTAGCGCGGGACATCCTTGGGGGCCTCTTAGAAATTCggctt-tcacagccatggtgacggtggcctttcctgtctga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16961857 97 - 21915920 CCACACTCAAGCTTCCGAGGGCGAGCAC-GGACATCCTTGGGGGCCTCTTAGAAATTCAGCCT-CCACAgccatggtgacggtggcctttcctgtctga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 98040 96 - 21531802 CCACACTCAAGCTTCC-AGGGCGAGCGCGGGACATCCTTGGGGGCCTCTTAGAAATTCggcct-cca-agccatggtgacggtggcctttcctgactga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 122203 98 - 2515279 CCACACTCAAGCTTCCGAGGGTGAGCGCGGGACATCCTTGGGGGCCTCTTAGAAATTCGGCCT-CCACAGCCATGGTgacggtggcctttcctgtctga i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 13360 97 + 138751 TCATACTGAAGCTTCCGTGGATGAGCGCGGGGCCTCCTTGGGGGGCTCATAGAAATTCTGCTTCCCACAGCCATCCTGAGG--TGCTTTTTCTGACTGA i calJac3.chrUn_GL286444 C 0 I 430 s cebCap1.NW_016107703v1 492885 98 - 2125214 tcacaatcaagcttccatggatgagcacggggcctccttgaggggctcttagaaattctgcttcccacagccattgtgagagtggcttttcctgacct- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 100155 93 + 376347 tcacactcaagcttccgtggatgagcgtggggcctccttggggggcccttagaaattctgcttcccacagccatcgtgagggtggcttttcct------ i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 2229191 3154 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C a score=705608.000000 s hg38.chr7_KI270899v1_alt 124926 112 + 190869 gctggatggggacctgctggagagacgggagctgagaggggtctgagctgacatgtatttttggaagaaacctctggctgctgtgttgagactagactggaTATAGATACAG s panTro5.chr7_NW_015973503v1_random 2757 112 + 11459 gctggatggggacctgctggagagacgggagctgagaggggtctgagctgacatgtatttttggaagaaatctctggctgctgtgttgagactagactggaTATAGATACAG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85670 111 - 432965 gctggatggggacctgc-ggagagacgggagctgagaggggtctgagctgacctgtatttttggaagaaacctctggctgctgtgttgagactggactggaTATAGATACAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 143902 112 + 85365473 gctgggtggggacctgctggagggacgggagctgagaggggtctgagcagacatgtatttttggaagaatcctctggctgctgtgttgagactggactggaTATAGATACAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991027 112 + 185818997 gctggatgaggacctgctggagggacgggcactgagaggggtctgaactgacatgtatttttgaaagaaacctctggctgctgtgttgagactggactggaTATAGATACAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607596 112 + 192294377 gctggatgaggacctgctggagggacgggcactgagaggggtctgaactgacatgtatttttgaaagaaacctctggctgctgtgttgagactggactggaTATAGATACAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373443 112 - 9440265 gctggatgaggacctgctggagggacgggcactgagaggggtctgaactgacatgtatttttgaaagaaacctctggctgctgtgttgagactggactggaTATAGATACAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16961954 112 - 21915920 gctggatgaggacctgctggagggacgggcgctgagaggggtctgaactgacatgtatttttgaaagaaacctctggctgctgtgttgagactggactggaTATAGATACAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 98136 112 - 21531802 gctggatgaggacctgctggagggacgggcgctgagaggggtctgagctgacgtgtatttttggaagaaacctctggctgctgtgttgagactggactggaTATAGATACAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 122301 112 - 2515279 gctggatgagaacctgctggagggacgggcgctgagaggggtctgaactgacatgtatttttgaaagaaacctctggctgctgtgttgagactggactggaTATAGATACAG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 13887 111 + 138751 GCTGgatggggacctgctggagggatgggagctgagaggggtctgagctgatacaca-ttttggaagaaacctctggttgttgtgttgagactggattggaTATAGATACAG i calJac3.chrUn_GL286444 I 430 C 0 s cebCap1.NW_016107703v1 492983 96 - 2125214 ---------------gctggagggatgggaactgagagaggtctcagctgacatgta-ttttggaagaaacctctggctgttgtgttgagactggactggaTATAGATACAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 100248 101 + 376347 ----------gacctgccggagggatgggagctgagaggggtctgagctgacatgta-ttttgaaagaaacctctggctgttgtgttgagactggattggaTATAGATACAG i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 2229191 3154 - 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C a score=540507.000000 s hg38.chr7_KI270899v1_alt 125038 84 + 190869 CTCATGTATATTGTTCA-TTCACAGAGCACTTTCACCAAACACCCACATTCCAGCATTCCTGAGTGTGGCCTGCTACCTCAGAA--C- s panTro5.chr7_NW_015973503v1_random 2869 84 + 11459 CTCATGTATATTGTTCA-TTCACAGAGCACTTTCACCAAACACCCACATTCCAGCATTCCTGAGTGTGGCCTGCTACCTCAGAA--C- i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85781 84 - 432965 CTCATGTATATTGTTCA-TTCACAGAGCACTTTCACCAAACACCCACATTCCAGCATTCCTGAGTGTGGCCTGCTACCTCAGAA--C- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 144014 84 + 85365473 CTCATGTACATTGTTCA-TTCACAGAGCACTTTCACCAAACACCCACATTCCAGTGTTCCTGAATGTGGCCTGCTACCTCAGAA--C- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991139 83 + 185818997 CTCATGTACGTTGTTCA-TTCACAGAGCACTTTCACCAAACACCCACGTTCCAGCATGGCTGAATGTGACCTGCTACCTCTGAA---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607708 83 + 192294377 CTCATGTACGTCGTTCA-TTCACAGAGCACTTTCACCAAACACCCACGTTCCAGCATGGCTGAATGTGACCTGCTACCTCTGAA---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373555 83 - 9440265 CTCATGTACGTCGTTCA-TTCACAGAGCACTTTCACCAAACACCCACGTTCCAGCATGGCTGAATGTGACCTGCTACCTCTGAA---- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16962066 84 - 21915920 CTCATGTATGTTGTTCA-TTCACAGAGCACTTTCACCAAACACCCACGTTCCAGCATGGCTGAATGTGACCTGCTACCTCTGAAC--- i cerAty1.NW_012002954v1 C 0 I 1030 s chlSab2.chr28 98248 84 - 21531802 CTCATGTATGTCATTCA-TTCACAGAGCACTTTCACTAAACACCCACGTTCCAGCATGGCTTAATGTGACCTGCTACCTCTGAA-C-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 122413 84 - 2515279 CTCATGTACGTTGTTCA-TTCACAGAGCACTTTCACCAAACACCCACGTTTCAGCATGGCTGAATGTGACCTGCTACCTCTGAA-C-- i manLeu1.NW_012101810v1 C 0 I 910 s calJac3.chrUn_GL286444 13998 83 + 138751 CTCATGTATATTGTTCA-TTCACAGAGCACTTTCACCAAACACCCACATTCCAGCATTCCTGAATGTGGCCTGCTACCTCAGAA---- i calJac3.chrUn_GL286444 C 0 I 1 s cebCap1.NW_016107703v1 493079 83 - 2125214 CTCATGTATATTGTTCA-TTCACAGAGCACTTTCACCAAACACCCACATTCCAGCATTCCTGAATGTGGCCTGCTACCTCAGAA---- i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 100349 68 + 376347 TTCATGTATATTGTTCA-TTCACAGAGCACTTT---------------TTCCAGCATTCCTGAATGTGGCCTGCTACCTCAGAA---- i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 5905717 85 + 8137123 CTCATTTAGACCATTCAGTTCACAGAACACTTTCACAAAACACCCACATCCATGCTTTCCTGAATGTGGCCCTCTCCCTCAGAA---C i otoGar3.GL873611 T 54880 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e canFam3.chr6 61023060 486 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C a score=9059.000000 s hg38.chr7_KI270899v1_alt 125122 4 + 190869 AGAA s panTro5.chr7_NW_015973503v1_random 2953 4 + 11459 AGAA i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85865 4 - 432965 AGAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 144098 4 + 85365473 AGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991222 2 + 185818997 --AG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607791 2 + 192294377 --AG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373638 2 - 9440265 --AG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 98332 1 - 21531802 ---G i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 14082 4 + 138751 AGAA i calJac3.chrUn_GL286444 I 1 C 0 s cebCap1.NW_016107703v1 493163 4 - 2125214 AGAA i cebCap1.NW_016107703v1 I 1 I 214 s aotNan1.NW_018514293v1 100418 4 + 376347 AGAA i aotNan1.NW_018514293v1 I 1 I 232 s otoGar3.GL873611 5905802 4 + 8137123 AGAA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e cerAty1.NW_012002954v1 16962150 1030 - 21915920 I e saiBol1.JH378296 347878 0 - 2409723 C a score=30495.000000 s hg38.chr7_KI270899v1_alt 125126 13 + 190869 AGCGGGAGAAGGA s panTro5.chr7_NW_015973503v1_random 2957 13 + 11459 AGCGGGAGAAGGA i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85869 13 - 432965 AGCGGGAGAAGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 144102 13 + 85365473 AGTGGGAGAAGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991224 13 + 185818997 AACAGGGAGAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607793 13 + 192294377 AACAGGGAGAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373640 13 - 9440265 AACGGGGAGAGGA i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 98333 13 - 21531802 CACGGGGAGAGGA i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 14086 13 + 138751 TTGGGGAGAAGGA i calJac3.chrUn_GL286444 C 0 C 0 s otoGar3.GL873611 5905806 12 + 8137123 -CCAAGAGGAGGA i otoGar3.GL873611 C 0 n 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e cerAty1.NW_012002954v1 16962150 1030 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I a score=49016.000000 s hg38.chr7_KI270899v1_alt 125139 24 + 190869 GAGCTATATCATCATCTTTCTGtc s panTro5.chr7_NW_015973503v1_random 2970 24 + 11459 GAGCTAtatcatcatctttctgtc i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85882 24 - 432965 GAGCTAtatcatcatctttctgtc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 144115 24 + 85365473 GAGCTGtatcatcatctttctatc i nomLeu3.chr20 C 0 I 1392 s rheMac8.chr3 33991237 24 + 185818997 TAGTTATAGCGTCATTGTtctatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607806 24 + 192294377 TAGTTATAGCGTCATTGTtctatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373653 24 - 9440265 TAGTTATAGTGTCATTGTtctatc i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 98346 24 - 21531802 TAGTTATAGCATCATTGTtctgtc i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 14099 24 + 138751 AATCTATGTCTTCatctgtctagc i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e cerAty1.NW_012002954v1 16962150 1030 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I a score=11854.000000 s hg38.chr7_KI270899v1_alt 125163 20 + 190869 tatctatc---catctatcatct s panTro5.chr7_NW_015973503v1_random 2994 20 + 11459 tatctatc---catctatcatct i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 85906 23 - 432965 tatccatctatcatctatcatct i gorGor5.CYUI01015914v1 C 0 I 224 s nomLeu3.chr20 145531 20 + 85365473 tatctatc---cacctatcatct i nomLeu3.chr20 I 1392 C 0 s rheMac8.chr3 33991261 9 + 185818997 tatctatc---t----------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607830 9 + 192294377 tatctatc---t----------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373677 9 - 9440265 tatctatc---t----------- i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 98370 9 - 21531802 tatctatc---t----------- i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 14123 19 + 138751 tatctgtc---tatttgtctat- i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e cerAty1.NW_012002954v1 16962150 1030 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I a score=46006.000000 s hg38.chr7_KI270899v1_alt 125183 21 + 190869 atctatcatctatc---atctatc s panTro5.chr7_NW_015973503v1_random 3014 21 + 11459 atctatcatctatc---atctatc i panTro5.chr7_NW_015973503v1_random C 0 I 760 s gorGor5.CYUI01015914v1 86153 24 - 432965 atctatcatctatcactatctatc i gorGor5.CYUI01015914v1 I 224 I 1 s nomLeu3.chr20 145551 21 + 85365473 atctatcatctatc---acctatc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991270 21 + 185818997 atccatcatctatc---atctatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607839 21 + 192294377 atccatcatctatc---atctatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373686 21 - 9440265 atccatcatctatc---atctatt i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 98379 18 - 21531802 atc---tatccatc---atctatc i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 14142 15 + 138751 -------atctatc--tatctatc i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e cerAty1.NW_012002954v1 16962150 1030 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I a score=42127.000000 s hg38.chr7_KI270899v1_alt 125204 67 + 190869 atctatctatcta--cctatctacctatcatctatc-----------acctatc----------tatctatctaacctatctaccta-------tca s gorGor5.CYUI01015914v1 86178 77 - 432965 atctatctatcta--cctatctacctatcatctatc-----------atctatcatctatcacctatctatctaacctatctaccta-------tca i gorGor5.CYUI01015914v1 I 1 C 0 s nomLeu3.chr20 145572 48 + 85365473 acctatctgtcta--tctatctatctatcatcta------------------------------tatctacct----------tcta-------tca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991291 68 + 185818997 atctatctatctgtctctatctatccatcatctatc-atctgtctctatctatcatc-------tatctgtct-----------cta---------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33607860 47 + 192294377 atctatctatctgtctctatctatccatcatctatc-----------------------------atctgtct-----------cta---------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373707 58 - 9440265 atctatctatctgtctctatctatccatcatctatc-----------atctatcatc-------tatctgtct-----------cta---------- i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 98397 76 - 21531802 atctatctatctgtctctatctatccatcatctatctgtctctatctatctatcatc-------tatctgtct-----------ctatctatca--- i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 14157 57 + 138751 atctatctatata--gctatc-atctattacctatatgtctctttatatatata----------tatata--------------------------- i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e cerAty1.NW_012002954v1 16962150 1030 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I e panTro5.chr7_NW_015973503v1_random 3035 760 + 11459 I a score=15904.000000 s hg38.chr7_KI270899v1_alt 125271 6 + 190869 tctatc s gorGor5.CYUI01015914v1 86255 6 - 432965 tctacc i gorGor5.CYUI01015914v1 C 0 I 1 s nomLeu3.chr20 145620 6 + 85365473 tctatc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991359 6 + 185818997 tctatc i rheMac8.chr3 C 0 I 8 s macFas5.chr3 33607907 6 + 192294377 tctatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4373765 6 - 9440265 tctatc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16963180 6 - 21915920 tctatc i cerAty1.NW_012002954v1 I 1030 C 0 s chlSab2.chr28 98473 6 - 21531802 tctatc i chlSab2.chr28 C 0 I 799 s calJac3.chrUn_GL286444 14214 6 + 138751 tatata i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I e panTro5.chr7_NW_015973503v1_random 3035 760 + 11459 I a score=143666.000000 s hg38.chr7_KI270899v1_alt 125277 91 + 190869 atctatctgtctctgtc-------------------tctatc-atctatcatctatc-----------------tatctatc----atctatc---tatctgtctctatctatctatcatctatctgtctctatc s gorGor5.CYUI01015914v1 86262 90 - 432965 atctatctgtctctgtc-------------------tctgtc--tctatcatctatc--------------atctatctatc----atctatg---tatctgtctctacctatctatcatctatctgtctct--- i gorGor5.CYUI01015914v1 I 1 C 0 s nomLeu3.chr20 145626 98 + 85365473 atctgtctgtctctgtc-------------------tctatc-atctatcatctatctgtcgctattatctatctatctatc----atctatc---tatcta--tctatctatctatcatctatcta-------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991373 113 + 185818997 atctatctgtctctatctatcatctatctatctgtctctatctatctatc----atc-------tatctgtctctatctatc--------atc---tatctgtctctatctatctatcatctatctgtctctatc i rheMac8.chr3 I 8 I 23 s macFas5.chr3 33607913 96 + 192294377 atctatctgtc-------------------------tctatctatctatcatcaatc-------tatctgtctctatctatc----atctatc---tatctgtctctatctatctatcatctatctgtctctatc i macFas5.chr3 C 0 I 15 s macNem1.NW_012019910v1 4373771 104 - 9440265 atctatctgtctctatcta-----------------tctatctatctatcatctatc-------tatctgtctctatctatc----atctatc---tatctgtctctatctatctatcatctatctgtctctatc i macNem1.NW_012019910v1 C 0 I 756 s cerAty1.NW_012002954v1 16963186 101 - 21915920 atctatttgtc-------------------------tctatctatctatcatctatc------atctatgtctctatctatct---atctatctattatctgtctgcctctatctatcatctatctgtctctatc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 99278 99 - 21531802 atctatctgtc-------------------------tctgtctatctatcatctatc-------aattggtctctatctatctatcatctatc----atctatctgtctctatctatcatctatttgcctctatc i chlSab2.chr28 I 799 I 1 s calJac3.chrUn_GL286444 14220 68 + 138751 tattatctgtc-------------------------tctatctat-tatcatctatc--------atctatctctatc-atc----ctctatc--------------acctatctaccatc-------------- i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I e panTro5.chr7_NW_015973503v1_random 3035 760 + 11459 I a score=59966.000000 s hg38.chr7_KI270899v1_alt 125368 57 + 190869 tgtctctatc-atct---------atcta----tctgtcg-------ctatctatc---atctatctatctatcatctatc s gorGor5.CYUI01015914v1 86352 57 - 432965 -gtctctatc-atct---------atctacctatctgtcg-------ctatctacc------tatctatctatcatctatc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 145724 54 + 85365473 ----tctatc-atct---------atctatctatctat---------ctatctatc---atctatctatctatcatctat- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991509 66 + 185818997 tctatctatc-atct------atcatctatctgtctcta--------tcatctatttgtctctatctatctatcatctatc i rheMac8.chr3 I 23 I 37 s macFas5.chr3 33608024 71 + 192294377 tctatctatc-atct---------atctatctgtctctatctatctgtcatctatcagttggtctctatctatcatctatc i macFas5.chr3 I 15 C 0 s cerAty1.NW_012002954v1 16963287 55 - 21915920 --tatctatctatct---------atctatctatctat---------ctatctatc------tatctatctatcatctgtc i cerAty1.NW_012002954v1 C 0 I 12 s chlSab2.chr28 99378 65 - 21531802 atcatctatc-atctgtctctatcatctatctctctct---------gtctctatc------tatctatctatcatctatc i chlSab2.chr28 I 1 I 4 s calJac3.chrUn_GL286444 14288 44 + 138751 ---ctctatc-atct---------atctatctgcct-----------ctgtctatc------tgtctatctatc------- i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e macNem1.NW_012019910v1 4373875 756 - 9440265 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I e panTro5.chr7_NW_015973503v1_random 3035 760 + 11459 I a score=5525.000000 s hg38.chr7_KI270899v1_alt 125425 8 + 190869 acctatcc s gorGor5.CYUI01015914v1 86409 8 - 432965 acctatct i gorGor5.CYUI01015914v1 C 0 I 1 s nomLeu3.chr20 145778 6 + 85365473 --ctatct i nomLeu3.chr20 C 0 I 1 s macFas5.chr3 33608095 8 + 192294377 atctatct i macFas5.chr3 C 0 I 28 s chlSab2.chr28 99447 8 - 21531802 atctatct i chlSab2.chr28 I 4 I 11 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e cerAty1.NW_012002954v1 16963342 12 - 21915920 I e macNem1.NW_012019910v1 4373875 756 - 9440265 I e rheMac8.chr3 33991575 37 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I e calJac3.chrUn_GL286444 14332 0 + 138751 C e panTro5.chr7_NW_015973503v1_random 3035 760 + 11459 I a score=69183.000000 s hg38.chr7_KI270899v1_alt 125433 132 + 190869 tctatcatctatcatccatctatctatc------------------atctatctgtc------------------tcta-----------tcatctatc-at-----atctatctatc----------------------------------------tatctatctatct---atctatctatctatctatcatctatctatgtgtctct--------------------gtctatctatctatcct s gorGor5.CYUI01015914v1 86418 185 - 432965 tctatca---atcatctatctatctatc------------------atctatctgtc------------------tctagctatcatctatcacctatc-atctatcatctatctatcatccatctatttatctgtcatctgtctctatcatctatcatatctatctatct---atctatctatctatctatcatctatctatgtgtctct--------------------gtctatctatctatcct i gorGor5.CYUI01015914v1 I 1 C 0 s nomLeu3.chr20 145785 117 + 85365473 tctatcatctatctatcatctatctatc------------------atctatctgtc------------------gcta-----------ttatctatc-at-----------------------------------------------------------ctatctatct---atctatc-atctgtcatctatctgtctctgtctatct--------------------gactatctatccatctg i nomLeu3.chr20 I 1 C 0 s rheMac8.chr3 33991612 118 + 185818997 tctatcatctatc---------------------------------atctatctgtc------------------tcta-----------tcatctatctat-----ctctatctgtc------------------------------------------tctatctatctatcatctgtcaatc-atctatcatctatctatctgtctct--------------------gtctgtctatctatcca i rheMac8.chr3 I 37 C 0 s macFas5.chr3 33608131 168 + 192294377 tctatcatctatctgtc-tctatctatctatcatctgtctgcctctatctatctatcatctatcatctatctgtctcta-----------tcatctatctat-----ctctatctgtc------------------------------------------tctatctatctatcatctatcaatc-atctatcatctatctatctgtctct--------------------gtctgtctatctatcca i macFas5.chr3 I 28 C 0 s cerAty1.NW_012002954v1 16963354 131 - 21915920 tctatcatctatc---------------------------------atcc-tcta--------------------tcta-----------tcatctatctat-----ctctatctgtc----------------------------------------------tctatctatcatctatcaatc-atctatcatctatctatctgtctctgtctatctatccatctcccggtctgtctatcgatcca i cerAty1.NW_012002954v1 I 12 C 0 s chlSab2.chr28 99466 145 - 21531802 tctatcatctatctgtc-tctatctatc------------------atctatttgtc------------------tcta-----------tctatcatctat-----ctgtatctgtc------------------------------------------tctatctatct---atctatcaatc-atctatcatctatctatctgtctct----gtctatccatctcccggggtgtctatcgatcca i chlSab2.chr28 I 11 I 4 s calJac3.chrUn_GL286444 14332 42 + 138751 ------------------------------------------------------------------------------------------------------------------------------------------------------------------cacctgcct---gcctgtctatc-----------tatccatGtgcct----------------------gtctgtcta-------- i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 286284 1567 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e manLeu1.NW_012101810v1 122497 910 - 2515279 I e macNem1.NW_012019910v1 4373875 756 - 9440265 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493167 214 - 2125214 I e panTro5.chr7_NW_015973503v1_random 3035 760 + 11459 I a score=9747.000000 s hg38.chr7_KI270899v1_alt 125565 3 + 190869 tct s gorGor5.CYUI01015914v1 86603 3 - 432965 tct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 145902 3 + 85365473 tct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991730 3 + 185818997 tct i rheMac8.chr3 C 0 I 28 s macFas5.chr3 33608299 3 + 192294377 tct i macFas5.chr3 C 0 I 28 s cerAty1.NW_012002954v1 16963485 3 - 21915920 tct i cerAty1.NW_012002954v1 C 0 I 8 s chlSab2.chr28 99615 3 - 21531802 ccg i chlSab2.chr28 I 4 C 0 s manLeu1.NW_012101810v1 123407 3 - 2515279 tct i manLeu1.NW_012101810v1 I 910 C 0 s colAng1.NW_012117710v1 287851 3 + 6586416 tct i colAng1.NW_012117710v1 I 1567 C 0 s cebCap1.NW_016107703v1 493381 3 - 2125214 tct i cebCap1.NW_016107703v1 I 214 C 0 e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e macNem1.NW_012019910v1 4373875 756 - 9440265 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 14374 0 + 138751 C e panTro5.chr7_NW_015973503v1_random 3035 760 + 11459 I a score=609921.000000 s hg38.chr7_KI270899v1_alt 125568 125 + 190869 gtctatctatcCACGTGCCTTTCTGTCTGtagactggaggtgggtgggaggggcatggcagccatacaaaacagg--tacagaagtcacaggtgacagtggctccatcagagtggtgatggtgga-gg--- s gorGor5.CYUI01015914v1 86606 125 - 432965 gtctatctatccatgtgcctttctgtctGtagactggaggtgggtgggaggggcatggcagccatacaaaacagg--tacagaagtcaccggtgacagtggctccaccagagtggtgatggtgga-gg--- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 145905 121 + 85365473 gtctatctatcCATGTGC----CTGTCTCtagactggaggtgggtgggaggggcagggcagccatacaaaacagg--tacagaagtcacaggtgacagtggctccaccggagtggtgatggtgga-gg--- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991761 127 + 185818997 gtccatctacccatgtgcctgtctgtctatAGACTGGAGGTGGGTGGGAGGGGCAGGGCAGCCATACGAAACAGGTCTACAGAAGTCACAGGTGACAGCGGTTCCAGTGGACCAGTGACGGTGGA-GG--- i rheMac8.chr3 I 28 C 0 s macFas5.chr3 33608330 127 + 192294377 gtccatctacccatgtgcctgtctgtctatAGACTGGAGGTGGGTGGGAGGGGCAGGGCAGCCATACGAAACAGGTCTACAGAAGTCACAGGTGACAGCGGTTCCAGTGGACCAGTGACGGTGGA-GG--- i macFas5.chr3 I 28 C 0 s macNem1.NW_012019910v1 4374631 127 - 9440265 gtccatctacccatgtgcctgtctgtctatAGACTGGAGGTGGGTGGGAGGGGCAGGGCAGCCATACGAAACAGGTCTACAGAAGTCACAGGTGACAGCGGTTCCAGTGGACCAGTGACGGTGGA-GG--- i macNem1.NW_012019910v1 I 756 C 0 s cerAty1.NW_012002954v1 16963496 127 - 21915920 gtctatctacccatgtgcctgtctgtctatAGACTGGAGGTGGGTGGGAGGGGCAGGGCAGCCATACGAAACAGGTCTACAGAAGTCACAGGTGACAGCGGTTCCAGTGGACTAGTGATGGTGGA-GG--- i cerAty1.NW_012002954v1 I 8 C 0 s chlSab2.chr28 99618 128 - 21531802 gtctatctacccatgtgcctgtctgtctatAGACTGGAGATGGGTGGGAGGGGCAGGGCAGCCATACAGAACAGGTCTACAGAAGTCACAGGTCACAGCGGCTCCAGTGGACTGGTGACGGTGGAGGG--- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 123410 127 - 2515279 gtctatctacccatgtgcctgtctgtctatAGACTGGAGGTGGGTGGGAGGGGCAGGGCAGCCATACGAAACAGGTCTACAGAAGTCACAGGTGACAGCGGTTCCAGTGGACTAGTGATGGTGGA-GG--- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 287854 127 + 6586416 gtctatctaCCCATGTGCCTGTCTGTTTatagactggaggtgggtgggaggggcagggcagccatacaaaacaggtctacagaagtcacaggtgacagcggctccactggaccagtgacggtgga-gg--- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 14374 99 + 138751 -----------------------------gagactggttgtgggtgggaggggcagggcagccatacaaaacagg--tacagaagtcacaggtgacagtgattctgctggagtagtgatggtgga-ggtgg i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 493384 121 - 2125214 gtctatctatccatgtgcctgtctgtctatagactggatgcgggtgggaggggcagggcagccatacaaaacagg--tacagaagtc-------acagtggttctgctggagtagtgatggtgga-ggtgg i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023060 486 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e panTro5.chr7_NW_015973503v1_random 3035 760 + 11459 I a score=354152.000000 s hg38.chr7_KI270899v1_alt 125693 65 + 190869 taagaaatggttgtgtctggaaagattttTAGACCAGCGCTTCCCAAAAGCCCTCTCCCCGCATC s gorGor5.CYUI01015914v1 86731 65 - 432965 taagaaatggttgtgtctggaaagattttTAGACCAGCGCTTCCCAAAAGCCCTCTCCCTGCATC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146026 65 + 85365473 taagaaatggttgtgtctggaaagattttTAGACCAGCGCTTCCCAAAAGCCCTATCCATGCATC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991888 64 + 185818997 -AAGAAATGGTCGTGTCTAGAAAGACTTGTAGGGCAGAGCTTCCCAAAAGCCCTCTCCATGCATC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33608457 64 + 192294377 -AAGAAATGGTCGTGTCTAGAAAGACTTGTAGGGCAGAGCTTCCCAAAAGCCCTCTCCATGCATC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4374758 64 - 9440265 -AAGAAATGGTCGTGTCTAGAAAGACTTGTAGGGCAGAGCTTCCCAAAAGCCCTCTCCATGCATC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16963623 64 - 21915920 -AAGAAATGGTCGTGTCTAGAAAGACTTGTAGGGCAGAGCTTCCCAAAAGCCCTCTCCATGCATC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 99746 64 - 21531802 -AAGGAATGGTTGTGTCTAGAAAGACTTGTAGGGCAGAGCTTCCCAAAAGCCCTCTCCATGCACC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 123537 64 - 2515279 -AAGAAATGGTCGTGTCTAGAAAGACTTGTAGGGCAGAGCTTCCCAAAAGCCCTCTCCATGCATC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 287981 65 + 6586416 taagaaatggttgtgtctaggaagacttttacggcagagcTTCCCAAAAGCCCTCTCCATGCATC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 14473 64 + 138751 taagaaatgcttgtatctggaaagaattttagaccagagcTTCCC-AAAGCACTCTCCATGCATA i calJac3.chrUn_GL286444 C 0 I 2 s cebCap1.NW_016107703v1 493505 64 - 2125214 taagaaatggttgtatctggaaagaattttagaccagagcTTCCC-AAAGCACTCTCGATGCATA i cebCap1.NW_016107703v1 C 0 I 2 s canFam3.chr6 61023546 64 - 77573801 TGAGACATGGTTGC-TCTGCACATATTTTTAGATCAGAGCTTCACAAAAGCACTCTCCCTGCACT i canFam3.chr6 I 486 C 0 e otoGar3.GL873611 5905818 0 + 8137123 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e panTro5.chr7_NW_015973503v1_random 3035 760 + 11459 I a score=217567.000000 s hg38.chr7_KI270899v1_alt 125758 41 + 190869 CCCCACCCCCACCACCTCTGACACCTAG------------------------------------------CTTTTTCTTC-CAT s panTro5.chr7_NW_015973503v1_random 3795 41 + 11459 CCCCACCCCACCCATCTCTGACACCT-C------------------------------------------CTTTTTCTTCTCAT i panTro5.chr7_NW_015973503v1_random I 760 C 0 s gorGor5.CYUI01015914v1 86796 41 - 432965 CCCCACCCCCACCATCTCTGACACCTAG------------------------------------------CTTTTTCTTC-CAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146091 41 + 85365473 CCCCACCCCCACCATCTTTGACACCTAG------------------------------------------CTTTTTCTTC-CAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991952 41 + 185818997 CCCCACCCCCACCGTCTTTGACACCTAG------------------------------------------CTTTTTCTTC-CAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33608521 41 + 192294377 CCCCACTCCCACCGTCTTTGACACCTAG------------------------------------------CTTTTTCTTC-CAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4374822 41 - 9440265 CCCCACCCCCACCATCTTTGACACCTAG------------------------------------------CTTTTTCTTC-CAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16963687 41 - 21915920 CCCCACCCCCACCGTCTTTGACACCTAG------------------------------------------CTTTTTCTTC-CAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 99810 41 - 21531802 CCCCACCCCCACCACCTTTGACACCTGG------------------------------------------CTTTTTCTTC-CAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 123601 41 - 2515279 CCCCACCCCCACCGTCTTTGACACCTAG------------------------------------------CTTTTTCTTC-CAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 288046 41 + 6586416 CCCCACCGCCACCATCTTTGACACCTAG------------------------------------------CTTTTTCTTC-CAT i colAng1.NW_012117710v1 C 0 I 300 s calJac3.chrUn_GL286444 14539 83 + 138751 CCACACCCCCACCATCTTTGACAACTAGGTTTTGTGGTGGTGtttttttggttttttttgtttgttgttttttttttttt-CAT i calJac3.chrUn_GL286444 I 2 C 0 s cebCap1.NW_016107703v1 493571 58 - 2125214 CCACACCCTCACTATCTTTGACAACTAG---------------------GGtttttttttttt----ttttttttttttC-CAT i cebCap1.NW_016107703v1 I 2 C 0 s canFam3.chr6 61023610 27 - 77573801 ------------CTTTTCCTTCACCTCG--------------------------------------------TTTTTTTT-CAT i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 5905818 0 + 8137123 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=658555.000000 s hg38.chr7_KI270899v1_alt 125799 105 + 190869 AAGAGT-CTGGCTTAGCT--TAAACTTCAGGGTCATTCTGATTTACAATACGGCAAAATCCTGTAAGCAAAGATGCACAAAGACTGCAGGCCTGAAATCAGTGTGAAA s panTro5.chr7_NW_015973503v1_random 3836 107 + 11459 AAGAGTTCTGGCTTAGCTGTTAAACTT-AGGGTAATTGTGTTTAGCAATACGGCAAAATCCTGTAAGCAAAGATGCACAAAGACTGCAGGCCTGAAATTAGTGTGAAA i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 86837 106 - 432965 AAGAGT-CTGGCTTAGCTG-TAAACTTCAGGGTAATTCTGATTTACAATACGGCAAAATCCTGTAAACAAAGATGCACAAAGACTGCAGGCCTGAAATGAGTGTGAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146132 106 + 85365473 AAGAGT-CTGGCTTAGCTG-TAAACTTCAGGGTAATTCTGATTTACAATATGGCAAAATCCTCTAAGCGAAGATGCACAAAGACTGCAGGCCTGAAATTAGTGTGAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33991993 105 + 185818997 AACGGT-CTGGCTTAGCTG-TAAACTTCAGGGTAATTCTGATTTACAATATAGCAAAATCCTCTAAGCAAAGATGCACAAAGACTTCA-GCCTGAAATTGGTGTGAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33608562 105 + 192294377 AACAGT-CTGGCTTAGCTG-TAAACTTCAGGGTAATTCTGATTTACAATATAGCAAAATCCTCTAAGCAAAGATGCACAAAGACTTCA-GCCTGAAATTGGTGTGAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4374863 105 - 9440265 AACAGT-CTGGCTTAGCTG-TAAACTTCAGGGTAATTCTGATTTACAATATAGCAAAATCCTCGAAGCTAAGATGCACAAAGACTTCA-GCCTGAAATTGGTGTGAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16963728 105 - 21915920 AACAGT-CTGGCTTAGCTG-TAAACTTCAGGGTAATTCTGATTTACAATATAGCAAAATCCTCTAAGCAAAGATGCACAAAGACTTCA-GCCTGAAATTGGTGTGAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 99851 105 - 21531802 AACAGT-CTGGCTTAGCTG-TAAACTTCAGGGTAATTCTGATTTACCAGACAGCAAAATCCTCTAAGCAAAGACGCACAAAAACTTCA-GCCTGAAATTGGTGTGAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 123642 105 - 2515279 AACAGT-CTGGCTTAGCTG-TAAACTTCAGGGTAATTCTGATTTACAATATAGCAAAATCCTCTAAGCAAAGATGCACAAAGACTTCA-GCCTGAAATTGGTGTGAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 288387 105 + 6586416 aagaGT-CTAGCTTAACTG-TAAACTTCAGGGTAATTCTGATTTACAATACAGCAAAATCCTCTAAGCAAAGATGCACAAAGACTTCA-GCCTGAAATTGGTGTGAAA i colAng1.NW_012117710v1 I 300 C 0 s calJac3.chrUn_GL286444 14622 106 + 138751 AAGAAT-CTGGCTTAGCTG-TAAATTTCAGAGCAATTCTGATTTACAATACAGAAAAATCCTCTAAGCAAAGATGTACAAAGACTGCAGGTCTGAAATTAGTGTAAAA i calJac3.chrUn_GL286444 C 0 I 153 s cebCap1.NW_016107703v1 493629 106 - 2125214 AAGAAT-CTGGCTTAGCTG-TAAATTTCAGGGCAATTCTAATTTACAATACAGAAAAATCCTCTAAGCAAAGATGTACAAAGACTGCAGGTCTGAAATTAGTGTGAAA i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61023637 85 - 77573801 GAGAGT-TTGGTTTACCTG-CTAACTTCAGGGTGATTCTAATGTACAACACACCAC----------------ATGCAATGAGACCGAA---CGGAAAC--ATGTAAAC i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 5905818 0 + 8137123 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=60603.000000 s hg38.chr7_KI270899v1_alt 125904 13 + 190869 AGAGAGTATAAAG s panTro5.chr7_NW_015973503v1_random 3943 13 + 11459 AGAGAGTATAAAG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 86943 13 - 432965 AGAGAGTATAAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146238 13 + 85365473 AGAGAATATAAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33992098 13 + 185818997 AGAAACCATAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33608667 13 + 192294377 AGAAACCATAAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4374968 13 - 9440265 AGAAACCATAAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16963833 13 - 21915920 AGAAACCATAAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 99956 13 - 21531802 ACAGAACATAAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 123747 13 - 2515279 AGAAACCATAAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 288492 13 + 6586416 AGAGAACATAAAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 14881 13 + 138751 AGAGAATATAAAG i calJac3.chrUn_GL286444 I 153 C 0 s cebCap1.NW_016107703v1 493735 13 - 2125214 AGAGAATATAAAG i cebCap1.NW_016107703v1 C 0 I 160 s canFam3.chr6 61023722 7 - 77573801 ACGGGCT------ i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 5905818 0 + 8137123 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=6864.000000 s hg38.chr7_KI270899v1_alt 125917 2 + 190869 GG s panTro5.chr7_NW_015973503v1_random 3956 2 + 11459 GG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 86956 2 - 432965 GG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146251 2 + 85365473 AG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33992111 2 + 185818997 AG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33608680 2 + 192294377 AG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4374981 2 - 9440265 AG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16963846 2 - 21915920 AG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 99969 2 - 21531802 AG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 123760 2 - 2515279 AG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 288505 2 + 6586416 AG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 14894 2 + 138751 AC i calJac3.chrUn_GL286444 C 0 C 0 e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023729 0 - 77573801 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 493748 160 - 2125214 I a score=1103063.000000 s hg38.chr7_KI270899v1_alt 125919 172 + 190869 AACACGTGCAGTAAAGTATTTCAACACATTTACTCTGTGCACACGTCTGCAGCCTCAGCCGCGCTTCTGACCTCAGGTCCAGCCACACATCCCGCCCCC-GAGGGAAG----GATTCAGACCTGGAGCCCTTTTTCTTGAGGAGCTGGGCAGTGGTGGG--CTGGACAGCAGAAGGAAG s panTro5.chr7_NW_015973503v1_random 3958 172 + 11459 AACACGTGCAGTAAAGTATTTCAACACATTTACTCTGTGCACACGTCTGCAGCCTCAGCCGCGCTTCTGACCTCAGGTCCAGCCACACATCCCGCCCCC-GAGGGAAG----GATTCAGACCTGGAGCCCTTTTTCTTGAGGAGCTGGGCAGTGGTGGG--CTGGAGAGCAGAAGGAAG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 86958 172 - 432965 AACACGTGCAGTAAAGTATTTCAACACGTTTACTCTGTGCACACGTCTGCAGCCTCAGCCGCGCTTCTGACCTCAGGTCCAGCCACACGTCCCGCCCCC-GAGGGAAG----GATTCAGACCTGGAGCCCTTTTTCTTGAGGAGCTGGGCAGTGGTGGG--CTGGACAGCAGAAGGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146253 172 + 85365473 AACA-GTGGGGTAAAGTATTTCAACACATGTACTCTGTGCACACGTCTGCAGCCTCAGCCACGCTTCTGGCCTCAGGTCCAGCCACACATCCCGCCCCCTGAGGGAAG----GATTCAGACCTAGAGCCCTTTTTCTTGAGGAGCTGGGCAGTGGTGGA--CTGGACAGCGGAAGGAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33992113 174 + 185818997 AACACGTGCAGTAAAGAATTTCAGCACATTTACTCTGTGCACACGTCTGCAGCCTCAGCCACACTTCTGACCTCAGGTCCAGCCACATATCCCGCCCCC-GAGGGAAG----GATTCAGACCTAGGGCCCTTTTTCTTGAGGAACTGGGCAGTGGGGGGGCCCGGACAGCAGAAGGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33608682 174 + 192294377 AACACGTGCAGTAAAGAATTTCAGCACATTTACTCTGTGCACACGTCTGCAGCCTCAGCCACGCTTCTGACCTCAGGTCCAGCCACATATCCCGCCCCC-GAGGGAAG----GATTCAGACCTAGGGCCCTTTTTCTTGAGGAACTGGGCAGTGGGGGGGCCCGGACAGCAGAAGGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4374983 174 - 9440265 AACACGTGCAGTAAAGAATTTCAGCACATTTACTCTGTGCCCACGTCTGCAGCCTCAGCCACGCTTCTGACCTCAGGTCCAGCCACATATCCCGCCCCC-GAGGGAAG----GACTCAGACCTAGGGCCCTTTTTCTTGAGGAACTGGGCAGTGGGGGGGCCCGGACAGCAGAAGGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16963848 174 - 21915920 AACACGTGCAGTAAAGAATTTCAGCACATTTACTCTGTGCACACGTCTGCAGCCTCAGCCACGCTTCTGACCTCAGGTCCAGCCACATATCCCGCCCCC-GAGGGAAG----GATTCAGACCTAGGGCCCTTTTTATTGAGGAACTGGGCAGTGTGGGGGCCCGGACAGCAGAAGGAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 99971 172 - 21531802 AACACGTGCAGTGAAGAATTTCAGCACATTTACTCCGTGCACACATCTGCAGCCTCAGCCGCGCTTCTGACCTCAGGTCCAGCCACACATCCCGCCCCC-GAGGGAAG----GATTCAGACCTAGGGCCCTTTTTCTTGAGGAACGGGGCAGTGGGGGG--CTGGACAGCAGAAGGAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 123762 174 - 2515279 AACACGTGCAGTAAAGAATTTCAGCACATTTACTCTGTGCACACGTCTGCAGCCTCAGCCGCGCTTCTGACCTCAGGTCCAGCCACATATCCCGCCCCC-GAGGGAAG----GATTCAGACCTAGGGCCCTTTTTCTTGAGGAACTGGGCAGTGGGGGGGCCTGGACAGCAGAAGGAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 288507 173 + 6586416 AACACGCGCAGTAAAGAATTTCAGCACATTTACTCTGTGCACACGTCTGCAGCCTCAGCTGTACTTCTGACCTCAGGTCCAGCCACACATCCCGCCCCC-AAGGGAAG----GGTTCAGACCTAGGGCCTTTTTTCTTGAGGAACTGGGCAGTGGGGGG-CCTGGACAGCAGAAGGAAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 14896 170 + 138751 AACACATGCAGTAAA-TATTTCAACACATCTACTCTGTGCACACGTCTGCAGCCTCAGTCACCCTTCTGA-TTCAGGTCCAGCCACACATCTCTCCCCCTGGGGGAAG----GAGTCAGACCTAGAGCCCTTTTTCTTGAAGAGCTGGGCAGTGTGGA---CTGGACAGCAGAAGGAAG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 493908 170 - 2125214 AACACATGCAGTAAA-TATTTCAACACATTTACTCTGTGCACACGTCTGCAGCTTCAGTCACCCTTCTGA-TTCAGGTCCAGCCATACATCTCTCCCCCTGGGGGAAG----GAGTCAGACCTAGAGCCCTTTTTCTTGAGGAGCTGGGCAGTGTGGA---CTGGACAGCAGAAGGAAG i cebCap1.NW_016107703v1 I 160 C 0 s canFam3.chr6 61023729 131 - 77573801 AGCACCTGCAGC---------------------------CACACATCT-CAGCATCTTACCCACCACTGACCCCAGG-----------------CCCCC-AAGAGGGGCTGAGGGTAAGGCTCTGGCCCCTTTCTCATGAGGAGTGAGGTCATGGTGGG--CTAGAGAACAGATTAAAG i canFam3.chr6 C 0 I 1423 e otoGar3.GL873611 5905818 0 + 8137123 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=145901.000000 s hg38.chr7_KI270899v1_alt 126091 23 + 190869 TCC-AGAAGCCAGATCTGCACAAC s panTro5.chr7_NW_015973503v1_random 4130 23 + 11459 TCC-AGAAGCCAGATCTGCACAAC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87130 23 - 432965 TCC-AGAAGCCAGATCTGCACAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146425 23 + 85365473 TCC-AGAAGCCAGATCTGCACAAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33992287 24 + 185818997 TCCAAGAAGCCAAATCTGCACAAC i rheMac8.chr3 C 0 I 2660 s macFas5.chr3 33608856 24 + 192294377 TCCAAGAAGCCAAATCTGCACAAC i macFas5.chr3 C 0 I 2077 s macNem1.NW_012019910v1 4375157 24 - 9440265 TCCAAGAAGCCAAATCTGCACAAC i macNem1.NW_012019910v1 C 0 I 2401 s cerAty1.NW_012002954v1 16964022 24 - 21915920 TCCAAGAAGCCAAATCTGCACAAC i cerAty1.NW_012002954v1 C 0 I 2056 s chlSab2.chr28 100143 24 - 21531802 TCCAAGAAGCCGAATCTGCACAAC i chlSab2.chr28 C 0 I 2121 s manLeu1.NW_012101810v1 123936 24 - 2515279 TCCAAGAAGCCAAATCTGCACAAC i manLeu1.NW_012101810v1 C 0 I 2252 s colAng1.NW_012117710v1 288680 24 + 6586416 TCCAAGAAGCCAAATATGCACAAC i colAng1.NW_012117710v1 C 0 I 3412 s calJac3.chrUn_GL286444 15066 24 + 138751 TCCAAGACGCCAAATCTGCACAAC i calJac3.chrUn_GL286444 C 0 I 3179 s cebCap1.NW_016107703v1 494078 24 - 2125214 TCCAAGACGCCAAATCTGCACAAC i cebCap1.NW_016107703v1 C 0 I 2806 e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023860 1423 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=15171.000000 s hg38.chr7_KI270899v1_alt 126114 31 + 190869 gggtgggggtcgggggttaggggtgggggtg s panTro5.chr7_NW_015973503v1_random 4153 31 + 11459 gggtggggctcgggggttaggggtgggggtg i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87153 31 - 432965 gggtgggggtcgggggttaggggtgggggtg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146448 30 + 85365473 AGGTGGGGGT-GGGGGTTAGAGGTGGGGGTG i nomLeu3.chr20 C 0 I 471 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023860 1423 - 77573801 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 494102 2806 - 2125214 I e calJac3.chrUn_GL286444 15090 3179 + 138751 I a score=1104.000000 s hg38.chr7_KI270899v1_alt 126145 71 + 190869 agggtg------------ggggtcgggggttaggggtgggggtgagggtgggggtcgggggttaggggtgggggtgagggtgg s panTro5.chr7_NW_015973503v1_random 4184 13 + 11459 agggtg----------------------------------------------------------------------agggtgg i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87184 67 - 432965 agggtggtggtgggggtgggggtcgggggttaggggtgggggtgagggtgagg----------------tggggtgagggtga i gorGor5.CYUI01015914v1 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023860 1423 - 77573801 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 494102 2806 - 2125214 I e calJac3.chrUn_GL286444 15090 3179 + 138751 I e nomLeu3.chr20 146478 471 + 85365473 I a score=40135.000000 s hg38.chr7_KI270899v1_alt 126216 104 + 190869 gggtgggggtggggggtggTCCGCAAGCCCAGGGAAGCAGGAGTGGGGTTA-GGCACGGAGATAGGGAAGAAACGGGACAAATTCAGAGTGATGCTCTGtttatg s panTro5.chr7_NW_015973503v1_random 4197 97 + 11459 gggtgggggtgg-------CCCGCAAGCCCAGGGAAGCAGGAGTGGGGTTA-GGCACGGAGATAGGGAAGAAATGGGACAAATTCAGAGTGATGCTCTGtttata i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87251 104 - 432965 gggtgggggtgggggGTGTTCCGCAAGCCCAGGGAAGCAGGAGTGGGGTTA-GGCACGGAGATAGGGAAGAAACGGGACAAATTCAGAGTGATGCTCTGtttatg i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 18269 101 + 138751 GGGGGGTGGCAGGGGGTGGTCTGCAAGCCCAGGAATGAAGGAGTGGAGTTAGGGGGAGGAGATGGTGAAGAAAGGGGATGAATTCAAAGTGATACTCTACG---- i calJac3.chrUn_GL286444 I 3179 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023860 1423 - 77573801 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 494102 2806 - 2125214 I e nomLeu3.chr20 146478 471 + 85365473 I a score=91917.000000 s hg38.chr7_KI270899v1_alt 126320 117 + 190869 tgttatttatttatgtatttatttTGAGCTACCACAGATCAC--AAAGAAAACAGCCGATGATGGCTCATGAGGGTGTCTCAGGGAGGCCGTCGGGGCCCCTGCACCTTGAGTTGTTCT s panTro5.chr7_NW_015973503v1_random 4294 117 + 11459 tgttatttatttatgtatttatttTGAGCTACCACAGATCAC--AAAGAAAACAGCCAACGATGGCTCATGAGGGTGTCTCAGGGAGGCCGTGGGGGCCCCTGCACCTTGAGTTGTTCT i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87355 117 - 432965 tgttatttatttatgtacttatttTGAGCTACCACAGATCAC--AAAGAAAACAGCCGATGATGGCTCATGAGGGTGTCTCAGGGAGGCCGTGGGGGCCCCTGCACCTTGAGTTGTTCT i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 18370 115 + 138751 TG----TTATTTATGTATTAATTTTGAGCTGCCACAGATCACAAAAAAAAAACAGCCAATGATGACTGGTGAAGGTGTCTCAGGGAGGCCATGGGGTCCCCTATACCTTGAGATGTTCT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 496908 117 - 2125214 tgttatttatttatgtattaatttTGAGCTGCCACAGATCAC--AAAGAAAACAGCCAATGATGACTGGTGAACGTGTCTCAGGGAGGCCATGGGGGCCCCTACACCTTGAGATGTTCT i cebCap1.NW_016107703v1 I 2806 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 5905818 0 + 8137123 I e canFam3.chr6 61023860 1423 - 77573801 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 146478 471 + 85365473 I a score=77372.000000 s hg38.chr7_KI270899v1_alt 126437 91 + 190869 AAGGTAGGGAGGAGGGAAAGCGATCAGCCTGCTGGTCCCTTTCCATTGCTCAAGACCCTGCCAAGCAGCCCCTGGCCTTTGCCCAAAGTGG s panTro5.chr7_NW_015973503v1_random 4411 91 + 11459 AAGGTAGGGAGGAGGGAAAGCGATCAGCCTGCTGGTCCCTTTCCATTGCTCAAGACCCTGCCAAGCAGCCCCTGGCCTTTGCCCAAAGTGG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87472 91 - 432965 AAGGTAGGGAGGAGGGAAAGCAATCAGCCTGCTGGTCCCTTTCCATTGCTCAAGACCCTGCCAAGCAGCCCCTGGCCTTTGCCCAAAGTGG i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 18485 77 + 138751 AAGGTGGGGAGGAAGGAAAGCAATTGGCCTGGCAGTCCCTTTCCATTGCTCA--------------AGCCCTTGGCGTTTACCCAAACAGA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 497025 77 - 2125214 AAGGTGGGGAGGAGGGAAAGCAATTGGCCTGGCAGTCCCTTTCCATTGCTCA--------------AGCCCCTGGCGTTTGCCCAAACAGA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2232345 90 - 8137123 AGGGCTGAAGGAGGGGAACATAGTCTGTCTGCCAGTCCTTTTCAATTG-TCAAGACCCCTCCGAACAGCCGCTGGCCTTTCCCCAAAGCAG i otoGar3.GL873611 I 3154 I 8 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e canFam3.chr6 61023860 1423 - 77573801 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 146478 471 + 85365473 I a score=45191.000000 s hg38.chr7_KI270899v1_alt 126528 66 + 190869 AGACGATGGAGGGCTCAGGACGACGGGGCGAGGTGCTCAGTGCAGAGGAGGGAGCCTGCACCCA------CT s panTro5.chr7_NW_015973503v1_random 4502 66 + 11459 AGACGATGGAGGGCTCAGGACAACGGGGCGAGGTGCTCAGTGCAGAGGAGGGAGCCTGCACCCA------CT i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87563 72 - 432965 AGACATTGGAGGGCTCAGGACGACGGGGCGAGCTGCTCAGTGCAGAGGAGGGAGCCTGCAGCCACTCTGGCT i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 18562 66 + 138751 AATGGTGGGAGGGGTAAGGACAACGGGGCGTGCTGCTCAGTGCAGAGAAGGGAGCTTGCACCCA------CT i calJac3.chrUn_GL286444 C 0 I 6 s cebCap1.NW_016107703v1 497102 65 - 2125214 AATGGTTGGAGGGGTCAGGACGAC-GGGCGGGCTGCTCAGTGCAGAGGAGGGAGCCGGCACCCA------CT i cebCap1.NW_016107703v1 C 0 I 228 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e canFam3.chr6 61023860 1423 - 77573801 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 146478 471 + 85365473 I a score=6731.000000 s hg38.chr7_KI270899v1_alt 126594 15 + 190869 GGGGTAGAGCTGATG s panTro5.chr7_NW_015973503v1_random 4568 15 + 11459 GGGGTAGAGCTGATG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87635 15 - 432965 GGGGCAGAGCTGATG i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 18634 15 + 138751 GGGAAACAGCTGATG i calJac3.chrUn_GL286444 I 6 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e canFam3.chr6 61023860 1423 - 77573801 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 497167 228 - 2125214 I e nomLeu3.chr20 146478 471 + 85365473 I a score=1476.000000 s hg38.chr7_KI270899v1_alt 126609 2 + 190869 GC s panTro5.chr7_NW_015973503v1_random 4583 2 + 11459 GC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87650 2 - 432965 GC i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 18649 2 + 138751 GC i calJac3.chrUn_GL286444 C 0 C 0 s canFam3.chr6 61025283 2 - 77573801 GT i canFam3.chr6 I 1423 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 497167 228 - 2125214 I e nomLeu3.chr20 146478 471 + 85365473 I a score=1500.000000 s hg38.chr7_KI270899v1_alt 126611 1 + 190869 C s panTro5.chr7_NW_015973503v1_random 4585 1 + 11459 C i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87652 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146949 1 + 85365473 C i nomLeu3.chr20 I 471 C 0 s calJac3.chrUn_GL286444 18651 1 + 138751 C i calJac3.chrUn_GL286444 C 0 I 590 s canFam3.chr6 61025285 1 - 77573801 C i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 497167 228 - 2125214 I a score=33631.000000 s hg38.chr7_KI270899v1_alt 126612 38 + 190869 TGAGCATATGCGGCACCCACGGGACAGAATGCTCTTCC s panTro5.chr7_NW_015973503v1_random 4586 38 + 11459 TGAGCATATGCGGCACCCACGGGACAGAATGCTCTTCC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87653 38 - 432965 TGAGAATATGCGGCACCCACGGGACAGAATGCTCTTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146950 37 + 85365473 TCAGCATATGC-GCACCCACGGGACAGAATGTGCTTCC i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 19242 38 + 138751 TGAGCATACACAGCACCTACGTGACAGAACGTGCTTCT i calJac3.chrUn_GL286444 I 590 C 0 s canFam3.chr6 61025286 38 - 77573801 TGAGCTTGTGTGGCATCTAAAGGAGAGAAGACACTCCC i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 497167 228 - 2125214 I a score=351805.000000 s hg38.chr7_KI270899v1_alt 126650 295 + 190869 --CCCATCCTTGCCCAGGTTGCT-GGAGCTGACACCCAGGTGAACGCGGCTGGGACGAAACAGTGGTGA------GCGGCCACTAAGCTTCTG-TCCCAGTCT------------------------CCGTCAGCTGACCCCACCGAGAGCACACACTTAC-CCAGGAGAGAATCACACCCGGCCCTTCTGAGTGCTGTGGCGCCTTCAGACTTTATTCGTAGCAGATGCCGTGAGGACTCTGCCCACATTTCTCTGTATCCACTGACCATTTTTAT-----------------------------------------------------GCCCCCGAGCCCCAGGTCTCTCAGTCCCAGCATCCGGCTTCTGAATCTTGCAG s panTro5.chr7_NW_015973503v1_random 4624 295 + 11459 --CCCATCCTTGCCCAGGTTGCT-GGAGCTGACACCCAGGTGAATGCGGCTGGGACAAAACAGTGGTGA------GCGGCCACTAAGCTTCTG-TCCCGGTCT------------------------CCGTCAGCTGACCCCACCGAGAGCACACACTTAC-CCAGGAGAGAATCACACCCGGCCCTTCTGAGTGCTGTGGCGCCTTCAGACTTTATTCGTAGCAGATGCCGTGAGGATTCTGCCCACATTTCTCTGTATCCACTGACCATTTTTAT-----------------------------------------------------GCCCCCGAGCCCCAGGTCTCTCAGTCCTAGCATCCGGCTTCTGAATCTTGCAG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 87691 347 - 432965 --CCCATCCTTGCCGAGGTTGCT-GGAGCTGACACCCAGGTGCACGCAGCTGGGACGAAACAGTGGTGA------GCGGCCGCTGAGCTTCTG-TCCCGGTCT------------------------CCGTCAGCTGACCCCA-CGAGAGCGCACACTTAC-CCAGGAGAGAATCACACCCAGCCCTTCTGAGTGCTGTGGCGCCCTCAGACTTTATTCGTAGCAGATGCCGTGAGGACTCTGCCCACATTTCTCTGTATCCACTGACCATTTTTATGCCCCTGAGCCCCAGGTCTCTCAGTCCCAGCATCCGGCTTCTGAATCTTGCAGGCCCCCGAGCCCCAGGTCTCTCAGTCCCAGCATCCGGCTTCTGAATCTTGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 146987 255 + 85365473 --CCCATCCTTGCC-AGGTTGCT-GGAGCTGACA-CCAGGTGAATGCAGCTGGGAGGAAACAGCGGTGA------GCAGCCGCTGAGCTTCTG-TCCTGGTCT------------------------CCGTCAGCTGACCCCACCGAGAGC-TACGCTTAC-CCAGGAGAGAATCACACCCAGCCCTTCTGAGTGCTGTGGTGCCTTCAGACTTTACTCGTGGCAGATGCCGTGAGGACTCTGCCCACATTTCTCTGTATCCACTGACCATTTTTAT-----------------------------------------------------GCCCCTGAGCCCCAGG------------------------------------- i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 19280 290 + 138751 --CCCATCCTTGCCCAGGCCGCTGGGAGCTGACACCCAGGTGAATGCAGCAGGGACGAAACAGTGGTAA------GCGGCCGCTGAGCTTCTG-TCCTGGTCT------------------------AGGTCAGTTGACCCCACTGAGAGCCTACACTTAC-CCAGAGGAGAATCACATCTGGCCCTTCTGAATGCTGAGGTGCCTTCAGACTCTAATCGTAGCAGATGCCGTGAG--CTCTGCTCACATT--TCTGTGCCTGTTGACCATTTTTAT-----------------------------------------------------GCACCTGAGCCCCAGG--TCTCAGTCCCAGCGTCCAGCTTCTGAATTTTGCAG i calJac3.chrUn_GL286444 C 0 T 51 s cebCap1.NW_016107703v1 497395 294 - 2125214 --CCCATCCTTTCCCAGGTCGCTGGGAGCTGACACCCAGACGAATGCAGCAGGGACGAAACAGTGGTAA------GCCGCCGCTGAGCTTCTG-TCCTGGTGT------------------------AGGTCAGCTGACCCCACTGAGAGCCTACACTTAC-CCAGGAGAGAATCACACCTGGCCCTTCTGAATGCTGAGGTGCCTTCAGATTCTAATCgtagcagatgccatgag--ctctgcccacatttctctgtgtctgttggccatttttat-----------------------------------------------------gcacctgatccccaggtctctcagtcccagcatccagcttctgaattttgcag i cebCap1.NW_016107703v1 I 228 C 0 s canFam3.chr6 61025324 321 - 77573801 TCACCATCCCTGTCCAGGATGCTGGAAGCCAACTCCAAAGCAAACATGGCTCAGGGGCAGTAGAGGTGATAGTGGATGGTTGCTGAGCTTCTGCTTCTGGTCTAGGTGCTCACCCCACTAGGACTTGAGGTCAGGGGACTCCACTAAGGGCCTGCGCTTACTCCAAGAGACAAACACTTGTGGCCC-TCTGAATGCCATGTTCTCTTTAGA-TCTGGTTGCAGTAGATGTTGTCCTTGTTCTACCTCCATTTCCTACTGTCCATCTACTATTTCTAT-----------------------------------------------------GCACCTAAGCTCCAGGTCTTTTGCTCTCAACATCCAGTTTCTGAGT------- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=5511.000000 s hg38.chr7_KI270899v1_alt 126945 11 + 190869 GCCCCCGAGCC s panTro5.chr7_NW_015973503v1_random 4919 11 + 11459 GCCCCCGAGCC i panTro5.chr7_NW_015973503v1_random C 0 I 106 s gorGor5.CYUI01015914v1 88038 11 - 432965 GCCCCCGAGCC i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 19519 11 + 138751 GCACCTGAGCC i calJac3.chrUn_GL286444 T 51 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e canFam3.chr6 61025645 0 - 77573801 C e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 497689 0 - 2125214 C e nomLeu3.chr20 147242 0 + 85365473 C a score=19711.000000 s hg38.chr7_KI270899v1_alt 126956 41 + 190869 CCAGGTCTCTCAGTCCCAGCATCCGGCTTCTGAATCTTGCA s panTro5.chr7_NW_015973503v1_random 5036 41 + 11459 CCAGGTCTCTCAGTCCCAGCATCCGGCTTCTGAATCTTGCA i panTro5.chr7_NW_015973503v1_random I 106 C 0 s gorGor5.CYUI01015914v1 88049 41 - 432965 CCAGGTCTCTCAGTCCCAGCATCCGGCTTCTGAATCTTGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 147242 36 + 85365473 -----TCTCTCAGTCCCAGCATCCAGCTTCTGAATCTTGCA i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 19530 39 + 138751 CCAGG--TCTCAGTCCCAGCGTCCAGCTTCTGAATTTTGCA i calJac3.chrUn_GL286444 C 0 I 1 s cebCap1.NW_016107703v1 497689 1 - 2125214 --------------------------------------g-- i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61025645 8 - 77573801 ---------------------------------ATTTCACA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=819592.000000 s hg38.chr7_KI270899v1_alt 126997 704 + 190869 -GGGGCTGCCCTCTGGCCACAGGAACCTCTTCCCTGGGGTTCGCTGAGCTCCTGGAGGGCTAC-GCTGTCTGGGAATTTATAACCCTCAGACAGTGAATGACAGATAAGACAT-AGAGCACCTGAGCA-C---CCCCCAAA-CCAAAGGGCACACCTGTGAGCAGTGACAAGCAGCCTCCCAGTTCCTCCATGAGATGGAGCCGGAGTGA-CCCCCACAGCGTGCGGCCTCCTCCCCACCCAGTACCACCCCCCATTCCCACAAAGGGGTCTTCCAGGGAACACATCATTTATTTATACTGCTTCCACACAAATCCTCGTCTT-GGGTTTGCTTCTAGAACCCCAGAC-TGAGATACCAACCCACAATCAC--GCCAGTGTTCAAATTCCATTCCCACCCAGGTGCC-----GAGGA---------------CGGCCAGGTGAGCA------GCAGAGGACGATGACAGGAATTCTGAGTCCGCCTCAGTGAACAAAGCGGCGTGTGGCACACGGTCATGCCACGAGCCT---------------------------------------------------------------GAGAGCAGATTGCAAAGCAAAGCGTGTAGTGCAATCCAACTTTTGGAAAGAAAAATAAATCCTTTATATATGACGgtgtaataaagaattgaaccttgcccagagaga--cctggcctcttcccccagcttctgagaggtggtctctaagccac---------------atgggacggtcttggtttgcctggg-cctttggaccacaccaggaggcctaaagtgtgattc s panTro5.chr7_NW_015973503v1_random 5077 703 + 11459 -GGGGCTGCCCTCTGGCCACAGGAACCTCTTCCCTGGGGTTCGCTGAGCTCCTGGAGGGCTAC-GCTGTCTGGGAATTTATAACCCTCAGACAGTGAATGACAGATAAGACAT-AGAGCACCTGAGCA-C---TCCCCAAA-CCAAAGGGCACACCTGTGAGCAGTGACCAGCAGCCTCCCAGTTCCTCCATGAGATGGAGCCGGAGTGA-CCCCCACAGCGTGCggcctcctacccacccagtaccaccccccattcccacaaaggggttttccagggaacacatcattta--tactctgcttccacacaaatcctcgtcttggggtctgcttctagaaccccagac-tgagataCCAACCCACAATCAC--GCCAGTGTTCAAATTCCATTCCCACCCAGGTGCC-----GAGGA---------------CGGCCAGGTGAGCA------GCAGAGGACGATGACAGGAATTCTGAGTCCGCCTCAGTGAACAAAGCGGCGTGTGGCACACGGTCATGCCACGAGCCT---------------------------------------------------------------GAGAGCAGATTGCAAAGCAAAGCGTGTAGTGCAATCCAACTTTTGGAAAGAAAAATAAATCCTTTATATATGACGgtgtaataaagaattgaaccttgcccagagaga--cctggcctcttcccccagcttctgagaggtggtctctaagccac---------------atgggacggtcttggtttgcctggg-cctttggaccacaccaggaggcctaaagtgtgattc i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 88090 702 - 432965 -GGGGCTGCCCTCTGGCCACAGGAACCTCTTCCCTGGGGTTCGCTGAGCTCCTGGAGGGCTAG-GCTGTCTGGGAATTTATAACCCTCAGCCAGTGAATGACAGATAAGACAT-AGAGTACCTGAGCACC---CCCCCAAA-CCAAAGGGCACACCTGTGAGCAGTGACCAGCAGCCTCCCAATTCCTCCATGAGATGGACCCGGAGTGA-CCCCCACAGCGTGCggcctcctccccacccagtaccacccccgattcccacaaaggggttttccagggaacacatcatt----tatactgcttccacacaaatcctcgtcttggggtctgcttttagaaccccagac-tgagataCCAACCCACAATCAC--GTCAGTGTTCAAATTCCATTCCCACCCAGGGGCC-----GAGGA---------------CGGCCAAGTGAGCA------GCAGAGGGCGATGACAGGAATTCTGAGTCTGCCTCAGTGAACAAAGCGGTGTGTGGCACACGGTCATGCCACGAGCCC---------------------------------------------------------------GAGAGCAGATTGCAAAGCAAAGCATGTAGCGCAATCCAACTTTTGGAAAGAAAAATAAATCCTTTATATATGACGgtgtaataaagaattgaaccttgcccagagaga--cctggcctcttcccccagcttctgagaggtggcctctaagccac---------------atgggagggtcttggtttgcctggg-cctttggaccacaccaggaggcctaaagtgtgattt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 147278 692 + 85365473 -GGGGCTGCCCTCTGGCCGCAGGAAACTCTTCCCTGGGGTTCGCTGAGCTCCTGGAGGCCTAG-GCTGTCTGGGGATGTATAACCCTTAGCCAGTGAATGACAGGTAAGACGTAAGAGTACCGGAGCA-C-TGCCCCCAAA-CCAAAGGGGACACCTGTGAGCGGTGACCAGCAGCCTCCCAGATCCTCCATGAGATGGAGCCAGAGTGA-CCCCCACAGCGTGTGGCCTCCTCCCCACCCAGTACCACCCCTCATTCCCACG-----------ctgggaacacatcatt----tatacggcttccacacaaatcctcatcttggggtctgcctctagAACCCCAGAT-TGAGAAAACAACCCACGTTCAC--GCCAGTGTCCAAATTCCATTCCCACCCAGGTGCC-----GAGGA---------------CGGCCAGGTGAGCA------GCAGAGGACGATGATGGGAATTCTGAGTCCGCCTCAGTGAACAAAGCAGCGCATGGCACACAGTCATGCCACGAGCCC---------------------------------------------------------------GAGAGCAGATTGCAAAGCAAAGCGTGT-GTGCAATCCAACTTTTGGAAAGAAAAATAAATCCTTTATATATGACGgtgtaataaagaattgaatcttgcccagagaga--cctggcctcttccctcagcttctgagaggtggtctctaagccac---------------atgggagggccttggtttgcctggg-cctttggaccacaccaggaggcctaaagtgtgattt i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 19570 699 + 138751 -GGGGCTGCCCTCCAGTCAAAGGAACCCCTTCCCTGTGGCTCTCTGAGCTCCTGGAGAGCCAG-GCTGTCTGGGAATTTACAGTCCTTAGCCAGTGAATGACAGATAAGACAG-AGAGTACCCGAGCA-C-TGCCCCCAAACCCAAAAGGGACACCTTTGAGCAGTGACCAGTAACTTCCCAGTTCCTCCATAAGATGAAGCCAGAATGAGCCCC--CAGCACTCGGCCTCCTCCCCACCCACTAGTGCCTGGAattcccatg--ctggttttccagggaacacatcatt----tatactgcttccacacaaatcctcatcttgggatctgcttctaggaacccagac-tgaaataCCAACCCACATTCAT--ACCAGTGTCCAAATTCCATTTCCAACCAGGTGCC-----AAGGA---------------TGACCAGGAGAGCA------GCAGAGGGCGATGGTGGGAATTCTGAGTCAGCCTCA------------------GGCACACAGTCATGCCATGAGTCC---------------------------------------------------------------AAGAGTCGATTCCAAAACCAAGTGTGTAGCGCAATCCAACTTTTGGAAAGAAAAATAAATCCTTTACACATGACtgtgtaataaagaattgaaccttgcccagaaaga--cctggcttcttctctcagattctgagaagtggtctctaagccttggaatgtcatgcctgatgagagggtcttggtttgcctgggacctttggaccatactgggaagcctacggtgagattt i calJac3.chrUn_GL286444 I 1 C 0 s cebCap1.NW_016107703v1 497690 696 - 2125214 --gggctgccctccagtcacaggacccactttcctgtggctctctgagctcctggagggctag-gctgtctggaaatttacaatccttagccagtgaatgacagataagacag-agagtacctgagca-c-cgcccctaaacccgaaagggacacctttgagcagtgaccagtaacttcccagttccttcatgggatgaagctggaatca-cccc--cagcacttggcctcctccccacccagtactgcccgaaattcccatg--ctggttttccagggaacacatcatt----tatcctgcttccacacaaatcctcatcttgggatctgcttctaggaacccagac-tgagataTCAA-CCACTTTCAC--ACCAGTGTCCAAATTCCATTTCCAACCAGGTGCC-----GAGGA---------------TGGCCAGGTGAGCA------GCAGAGGGCGATGGCGGGAATTCTGAGTCAGCCTCA------------------GGCACACGGTCACGCCATGAGTCC---------------------------------------------------------------CAGAGTCAATTGCAAAACCAAGTGTGTAGTGCAATCCAACTTTTGGAAAGAAAAATAAATCCTTTACACATGACtgtgtaataaagaattgaaacttgcctggagaga--cctggcttcttctctcagcttctgagaagtggtctctaagccttggaatgtcatgcctgatgagagggtcttggtttgcctgggacctccagaccataccagaaagcctacggtgagattt i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61025653 662 - 77573801 GAGGGCTGCCCTCTGGCCACAAGAACCCCCTTCCC--------TTGAGCTCCTGGAGGGATGGAATTGTCTGGGGAT-TACAACACTTAACTGGTCATTGACAGGAAGGGTTT-GAAT--CCAAAGCC-TTTGCCTCTAGA-C----AGAGACACCTGTGAGCTGTGACCTGTAGTCTCC-----------------------AGAGTCT-CTCC-------------CCCCACCCCATCTGCTTCCCCCTGGCATGC-------------------------CATCACT-------------TCCAAAC---------TATCAGAGTCTGCTTCTGAAACCCAAGACAGGAGACACCCACCCACATTCACTTGCCAGTAAATGAATTCTCTTCCCAAAAAGTTGCCTGTGGGGGGAAAAAAAAAAAGTTGCCTGTGGGGTGATCAGAGAAGGTAGAGAATGGTGATGGAAAACTTGAGACCATCTAAGTGAACAAAG--------------CTGTCATACCATGAGTCCATAAAAAGATGATGCCAAGAAATGTCCTATGGACCAAGGAAAGGGATCCAGTTAGAACAAAGAAAAAGTAGGTTGCAAAACAAAGTATAGAATGTGATTCCATTTCCAAGGGGGGGAGAAAG--CATTGTATAGGACtgtgtggtaaacaacttaaccttgcccagagagaggcttggcct-tgccctcagcttccgaggggggatggctaaac------------------gctgga-----------tgcctgag---------ccccatgagaaagtc-----tgtgactt i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e macFas5.chr3 33608880 2077 + 192294377 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=13555.000000 s hg38.chr7_KI270899v1_alt 127701 13 + 190869 -aggtaggggttgC s panTro5.chr7_NW_015973503v1_random 5780 13 + 11459 -aggtaggggttgC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 88792 13 - 432965 -aggtaggggttgc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 147970 13 + 85365473 -agcttagggttgt i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33610957 13 + 192294377 -agGTGGGCGTTGT i macFas5.chr3 I 2077 C 0 s calJac3.chrUn_GL286444 20269 13 + 138751 -aagtggaagctgt i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 498386 13 - 2125214 -aagtggaagttgt i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61026315 13 - 77573801 ggggggggggttt- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e otoGar3.GL873611 2232435 8 - 8137123 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=6656.000000 s hg38.chr7_KI270899v1_alt 127714 5 + 190869 -----------GATGA s panTro5.chr7_NW_015973503v1_random 5793 5 + 11459 -----------GATGA i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 88805 5 - 432965 -----------gatga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 147983 5 + 85365473 -----------gatca i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33610970 5 + 192294377 -----------AATCG i macFas5.chr3 C 0 C 0 s calJac3.chrUn_GL286444 20282 5 + 138751 -----------gatca i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 498399 5 - 2125214 -----------gatca i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2232443 5 - 8137123 -----------GATCA i otoGar3.GL873611 I 8 C 0 s canFam3.chr6 61026328 16 - 77573801 gagtcacTCAGCATCA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e chlSab2.chr28 100167 2121 - 21531802 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=30156.000000 s hg38.chr7_KI270899v1_alt 127719 9 + 190869 GCTCACCCT s panTro5.chr7_NW_015973503v1_random 5798 9 + 11459 GCTCACCCT i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 88810 9 - 432965 gctcaccct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 147988 9 + 85365473 gctcaccct i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33610975 9 + 192294377 GCTCACCCT i macFas5.chr3 C 0 I 2 s chlSab2.chr28 102288 9 - 21531802 GCTCACCCT i chlSab2.chr28 I 2121 I 2 s calJac3.chrUn_GL286444 20287 9 + 138751 gctcatccc i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 498404 9 - 2125214 gctcacccc i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2232448 9 - 8137123 GCTCAACCT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61026344 9 - 77573801 GTGCACCTT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e manLeu1.NW_012101810v1 123960 2252 - 2515279 I e cerAty1.NW_012002954v1 16964046 2056 - 21915920 I e macNem1.NW_012019910v1 4375181 2401 - 9440265 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=-10103.000000 s hg38.chr7_KI270899v1_alt 127728 3 + 190869 C--GA s panTro5.chr7_NW_015973503v1_random 5807 3 + 11459 C--GA i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 88819 5 - 432965 ccaga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 147997 5 + 85365473 ccaga i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33610986 3 + 192294377 --CGA i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 4377582 3 - 9440265 --CGA i macNem1.NW_012019910v1 I 2401 C 0 s cerAty1.NW_012002954v1 16966102 3 - 21915920 --CGA i cerAty1.NW_012002954v1 I 2056 C 0 s chlSab2.chr28 102299 3 - 21531802 --AGA i chlSab2.chr28 I 2 C 0 s manLeu1.NW_012101810v1 126212 3 - 2515279 --CGA i manLeu1.NW_012101810v1 I 2252 C 0 s calJac3.chrUn_GL286444 20296 5 + 138751 ccagg i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 498413 5 - 2125214 ccagg i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2232457 3 - 8137123 CCA-- i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61026353 3 - 77573801 CCA-- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 288704 3412 + 6586416 I e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=649190.000000 s hg38.chr7_KI270899v1_alt 127731 125 + 190869 -GTGAGCTGGAG-ACCTCCATCCGCATGGGCAGTCAACCATGGGGCCCCAGCAAAGGCTCTGGGACACTAAGCTCGGGGGAtcccacctggatgccccaagtgacactgcccacagctctgtgggga s panTro5.chr7_NW_015973503v1_random 5810 125 + 11459 -GTGAGCTGGAG-ACCTCCATCCGCATGGGCAGTCAACCACGGGGCCCCAGCAAAGGCTCTGGGACACTAAGCTCGGGGGAtcccacctggatgccccaagtgacactgcccacagctctgtgggga i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 88824 124 - 432965 -gtgagctggag-acCTCCACCCGCATGGGCAGTCAACCATGGGGCCCCAGCAAAGGCTCTGGGACACTAAGCTCGGGGGAT-Ccacctggatgccccaagtgacactgcccacagctctgtgggga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 148002 124 + 85365473 -gtgagctggag-acCTCCATCCGCATGGGCAGTCAACCATGGGGCCCCAGTAAAGGCTCTGGGACACTACGCTCGGGCGACCCCGCCTGgatg-ccagagcgacaccgtccacagctctgtgagga i nomLeu3.chr20 C 0 I 8 s macFas5.chr3 33610989 125 + 192294377 -GTGAGCTGGAG-ACCTCCATCTGCCTGGGCAGTCAACCACGGGGCCCCAGTAAAGGCTCTGGGACACTAAGCTCAGGTAATCCTGCCTGggtgccagaaaggacaccgtccacagctccatgggaa i macFas5.chr3 C 0 I 8 s macNem1.NW_012019910v1 4377585 125 - 9440265 -GTGAGCTGGAG-ACCTCCATCCACCTGGGCAGTCAACCACGGGGCCCCAGTAAAGGCTCTGGGACACTAAGCTCAGGTAATCCTGCCTGggtgccagaaaggacaccgtccacagctccatgggaa i macNem1.NW_012019910v1 C 0 I 8 s cerAty1.NW_012002954v1 16966105 125 - 21915920 -GTGAGCTGGAG-ACCTCCATCCGCCTGGGCAGTCAACCACGGGGCCCCAGTAAAGGCTCTGGGACACTAAACTCGGGTGATCCTGCCTGggtgccagaaaggacaccgtccatagctccatgggaa i cerAty1.NW_012002954v1 C 0 I 8 s chlSab2.chr28 102302 125 - 21531802 -GTGAGCTGGAG-ACCTCCATCCGCCTGGGCAGTGAACCACGGGGCCCCAGTAAAGGCTCTGGGACACTAAGCTGGGGTGATCCTGCCTGgatgccagaagggacaccgtctgcagctccatgggaa i chlSab2.chr28 C 0 I 8 s manLeu1.NW_012101810v1 126215 125 - 2515279 -GTGAGCTGGAG-ACCTCCATCCCCCTGGGCAGTCAACCACGGGGCCCCAGTAAAGGCTCTGGGACACTAAGCTCGGGTGATCCTGCCTGggtgccagaaaggacaccgtccacagctccatgggaa i manLeu1.NW_012101810v1 C 0 I 8 s colAng1.NW_012117710v1 292116 124 + 6586416 -GTGAGCTGGAG-ACCTCCATCCGCCTGGGCAGTCAACCATGGGG-ACCAGTAAAGGTTCTGGGACACTAAGCTCGGGTGATCCTGCCTGgatgccagaagggacacggtccacagctccacaggga i colAng1.NW_012117710v1 I 3412 I 8 s calJac3.chrUn_GL286444 20301 125 + 138751 -gtgagctggag-actgCCATCTGCATGGGCAGTCAACCGTGGGGCCCCAGTAGAGACTCTGGGACACTAAGCTCAGGTGAtcccacctggatgccagaagtgacactgtccacaactccacaggga i calJac3.chrUn_GL286444 C 0 I 8 s cebCap1.NW_016107703v1 498418 125 - 2125214 -gtgagttggag-acCACCATCTGCATGGGCAGTCAACCGTGGGGCCCCAGTAGAGACTCTGGGACACTAAGCTCAGGCGATCCCGCCTGgatgccagaagtgacgctgttcacagcttcacaggga i cebCap1.NW_016107703v1 C 0 I 8 s otoGar3.GL873611 2232461 88 - 8137123 -AGGGGCTGGAA-------------------AGGCAACCTTGGAGTCCCAGTAAAGACCCCCTGA--------TGGAGtgat-----------gccacaggtcatgctgcctttgactccacagggg i otoGar3.GL873611 I 1 I 9 s canFam3.chr6 61026356 100 - 77573801 GAGGGGCTGTAGAAACATCAGGTACAGGAGCAGCAGGTGACAGAGCCCCAGGAAAGACT---GGCAGCTGAGCTCCGGTGAGGACATGTGGCTGCCAGAAAGG------------------------ i canFam3.chr6 C 0 C 0 e rheMac8.chr3 33992311 2660 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=2278781.000000 s hg38.chr7_KI270899v1_alt 127856 320 + 190869 aggaccctctgcagg----tgggaactt-----------cctggactccggcctgagcgcctttccctgggttgatagtcatctgtgtcctacccttgtgctaagtcatgaccatgagtatatcagctttcagtgagtttttctagcgaattatcaaaactgagggtggtctt---ggagacccctacccttgtaactggtgaagaattgaggacagttttgtagatt-atggttccctctagccctgcaatGATGTTGACTGTAAGTACATTAAAGTATTTGTTAGACACT-GGAAAACGATAT-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG s panTro5.chr7_NW_015973503v1_random 5935 320 + 11459 aggaccctctgcagg----tgggaactt-----------cctggactccggcctgagcgcctttccctgggttgatagtcgtctgtgtcctacccttgtgctaagtcatgaccatgagtatatcagctttcagtgagtttttctagcgaattatcaaacctgagggtggtctt---ggagacccctactcttgtaactggtgcagaattgaggacagttttgtagact-acggttccctctagccctgcaatGATGTTGACTGTAAGTACATTAAAGTATTTGTTAGACACT-GGAAAACGATAT-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 88948 320 - 432965 aggaccctctgcagg----tgggaactt-----------cctggactccggcttgagcgcctttccctgggttgatagacgtctgtgtcctacgcttgtgctaagtcatgaccatgagtatatcagctttcagtgagtttttctagcgaattatcaaacctgagggtggtctt---ggagacccctacccttgtaactggtgcagaattgaggacagttttgtagatt-acggttccctctagccctgcaatGATGTTGACTGTAAGTACATTAAAGTATTTGTTAGACACT-GGAAAACGATAT-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 148134 320 + 85365473 aggaccccctgcagg----tgggaactt-----------cctggactctggcctgagcacctttccccgggttgatagtcatctgtgtcctacccctgtgctaagtcacgaccatgagtgtatcagctttcagtgagtttttctagtgaattatcaaacctgagggtggtctt---ggagacccctacccttgtaactggtgcagaactgaggagagtcttgtggatt-acggttccctctagccctgcaatGATGTTGACTGTAAGTACATTAAAGTATTTGTTAGACAGT-GGAAAACGATAT-GCAGA-ATGCAGGAAGTGGATGCCTCTGGGCTGTAG i nomLeu3.chr20 I 8 C 0 s rheMac8.chr3 33994971 319 + 185818997 aggacgctctgcagg----tgggaactt-----------cctggactccagcctgagcaccttcccctgggttgatttttgtctgtgtcctgctcctgtgctaagccgtgaccatgagtatatcagctttcagtgagtttttctagtgaattatcaaacctgagggtggtctt---ggagacccctacccttgtaactggtgcagaactgagggcagt-ttgtggatg-acggttccctctaTCCCTGCAACGATGTTGACTGTAAGTACATTAAAGTATTTGTCAGTAACT-GGAAAACTATAT-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG i rheMac8.chr3 I 2660 C 0 s macFas5.chr3 33611122 319 + 192294377 aggacgctctgcagg----tgggaactt-----------cctggactccagcctgagcaccttcccctgggttgatttttgtctgtgtcctgctcctgtgctaagccgtgaccatgagtatatcagctttcagtgagtttttctagtgaattatcaaacctgagggtggtctt---ggagacccctacccttgtaactggtgcagaactgagggcagt-ttgtggatg-acggttccctctatccctgcaACGATGTTGACTGTAAGTACATTAAAGTATTTGTCAGTAACT-GGAAAACTATAT-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG i macFas5.chr3 I 8 C 0 s macNem1.NW_012019910v1 4377718 319 - 9440265 aggacgctctgcagg----tgggaactt-----------cctggactccagcctgagcaccttcccctgggttgatttttgtctgtgtcctgctcctgtgctaagccgtgaccatgagtatatcagctttcagtgagtttttctagtgaattatcaaacctgagggtggtctt---ggagacccctacccttgtaactggtgcagaactgagggcagt-ttgtggatg-acggttccctctatccctgcaACGATGTTGACTGTAAGTACATTAAAGTATTTGTCAGTAACT-GGAAAACTATAT-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG i macNem1.NW_012019910v1 I 8 C 0 s cerAty1.NW_012002954v1 16966238 319 - 21915920 aggacgctctgcagg----tgggaactt-----------cctggactccagcctgagcaccttcccctgggttgatttttgtctgtgtcctgctcctgtgctaagccgtgaccatgagtatatcagctttcagtgagtttttctagtgaattatcaaacctgagggtggtctt---ggaaacccctacccttgtaactggtgcagaactgagggcagt-ttgtggatg-acggttccctctaTCCCTGCAACGATGTTGACTGTAAGTACATTAAAGTATTTGTCAGTAACT-GGAAAACTATAC-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG i cerAty1.NW_012002954v1 I 8 C 0 s chlSab2.chr28 102435 318 - 21531802 aggacgctctgcagg----tgggaactt-----------cccggactccggcctgagcaccttcccc-gggttgatttttgtctgtgtcctgctcctgtgctaagccgtgaccatgagtatatcagctttcagtgagtttttctagcgaattatcaaacctgagggtggtctt---ggagacccctacccttgtaactggtgcagaactgagggcagt-ttgtagata-acggttccctctatccctgcaACGATGTTGACTGTAAGTACATTAAAGTGTTTGTCAGTAACT-GGAAAACTATAT-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG i chlSab2.chr28 I 8 C 0 s manLeu1.NW_012101810v1 126348 319 - 2515279 aggacgctctgcagg----tgggaactt-----------cctggactccagcctgagcaccttcccctgggttgatttttgtctgtgtcctgctcctgtgctaagccgtgaccatgagtatatcagctttcagtgagtttttctagtgaattatcaaacctgagggtggtctt---ggagacccctacccttgtaactggtgcagaactgagggcagt-ttgtggatg-acggttccctctaTCCCTGCAACGATGTTGACTGTAAGTACATTAAAGTATTTGTCAGTAACT-GGAAAACTATAC-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG i manLeu1.NW_012101810v1 I 8 C 0 s colAng1.NW_012117710v1 292248 319 + 6586416 aggatgctctgcagg----tgggaactt-----------cccggactccggcctgagcaccttctcctgggttgatttttgtctgtgtcctgcttctgtgctaagccatgaccatgagtatatcagctttcaatgagtttttctagcgaattgtcaaacctaagggtggtctt---gaagatccctacccttgtaactggtgcagaactgacgaaagt-ttgtggttg-acggttccctctatccttgcaatGATGTTGACTGTAAGTACATTAAAGTGTTTGTCAGTAACT-GGAAAATTATAT-GCAAA-ATGTAGGAAGTGGATGCCTCTGGGCTGTAG i colAng1.NW_012117710v1 I 8 C 0 s calJac3.chrUn_GL286444 20434 319 + 138751 tggacactctgcagg----tgggaactt-----------cctggactctggccggagtatctttccctgggttgattttaatctgtgtcctac-cccatgctaagtcatgaccatgagtataacagctttcagtgagtttttctagcaaattatcatacctgaaggtggtttt---ggggacccttacccttgcaattggtgcagaactgagggcagttttgtggatt-atggttccctctagccttgcaatGATGCTGACCGTAAATTCATACAAGTATTTATTAGACACT-GAAATACTATAT-GCAAA-ATGTAGGAAGTGGATACCTCTGGGCTGTAG i calJac3.chrUn_GL286444 I 8 C 0 s cebCap1.NW_016107703v1 498551 319 - 2125214 tggatgttctgcagg----taggacctt-----------cctgaactctggcctgagcacctttccctgggttgattttaatttgtgtcctac-ccagtgctaagtcatgaccatgagtataacagctttcagtgagtttttctagcaaattatcatacctgaaggtggtttt---ggggacctttacccttgcaattggtgcaaaactgagggcggttttgtggatt-atggttccttctagccctgcaatgatgctgactGTAAATTCATACAAGTATTTGTTAGACACT-GGAATACTATAT-GCAAA-ATGCAGGAAGTGGATACCTCTGGGCTGTAG i cebCap1.NW_016107703v1 I 8 C 0 s otoGar3.GL873611 2232558 307 - 8137123 tggcagttttgcata----tgagtcctc-----------cctggactcca-cctaagcgcctttcctttggctgattttaa--ggtgttctttccctgtagtaaatcataaccatgagtataacagctgtcagtga-------tagcaaattatcaaacccaaaggtggtctt---ggggacccctaatggtgaagttgatgcc-aagtgaggacagttttgtggact-actgttccctctagttctgcaattatgttaactttA----CGTCAAAGTACTTGCTAGGCACCAGAAAAACTATGTGGCAAA-ATGCTGGAAGTAGATACCTCTGGGCTGTAG i otoGar3.GL873611 I 9 C 0 s canFam3.chr6 61026456 293 - 77573801 AGTGCCGTCTGCAGAGGGctgggagcttggagcttggagtctggattcttccctgggtgccttctccatgggttattttaacctgtacctctttgctgtactaaaccacagccatgagtgtatcagttctccgtgagctct----------------------gagtggcctcctagggaatcttcac-----------gtgcag-----------gt-gTGCACATGCACTGCTCCCTCCAACCCTGAAATAATGTTAACTCCACATACACGACAATGTTTGTGAG--GCT-GAAGAACCATCC-GGAAACATCCTGAAAATAGACACCCCTGGGATACAG i canFam3.chr6 C 0 I 1212 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=294733.000000 s hg38.chr7_KI270899v1_alt 128176 46 + 190869 GATCATGCATAAGAGTGTATTCTTGTGTTTTCT-ATTTATTTTGTGC s panTro5.chr7_NW_015973503v1_random 6255 46 + 11459 GATCATGCATAAGAGTGTATTCTTGTGTTTTCT-ATTTATTTTGTGC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 89268 46 - 432965 GATCATGCACAAGAGTGTATTCTTGTGTTTTCT-ATTTATTTTGTGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 148454 46 + 85365473 GATCGTGCACAGGAGTGCATTCTCGTGTTTTCT-ATTTATTTTGTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33995290 47 + 185818997 GATCATGCACGGGAGTGTATTCTTGTGTTTTTTAATTTATTTTTTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33611441 47 + 192294377 GATCATGCACGGGAGTGTATTCTTGTGTTTTTTAATTTATTTTTTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4378037 47 - 9440265 GATCATGCACGGGAGTGTATTCTTGTGTTTTTTAATTTATTTTTTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16966557 47 - 21915920 GATCATGCACGGGAGTGTATTCTTGTGTTTTTTAATTTATTTTTTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 102753 47 - 21531802 GATCATGCATGGGAGTGTATTCTTGTGTTTTTTAATTTATTTTGTGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 126667 47 - 2515279 GATCATGCACGGGAGTGTATTCTTGTGTTTTTTAATTTATTTTTTGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 292567 47 + 6586416 GATCACGCACAGGAGTGTATTCTTGTGTTTTTTTATTTATTTTGTGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 20753 46 + 138751 GGTCATGCACATATGTGTATTCTTGTGTGTTTT-ATTTATTTTGTGC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 498870 46 - 2125214 GGTCATGCACATGTGTGTATTCTTGTGCTTTTT-ATTTATTTTGTGC i cebCap1.NW_016107703v1 C 0 I 2125 s otoGar3.GL873611 2232865 47 - 8137123 GATCACATGTGCATGTGCATTCTTACGTATTTTTGTTTATTTTATGT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1748129.000000 s hg38.chr7_KI270899v1_alt 128222 274 + 190869 AAGACACGGTGAT-TAC-----ATACAGTGGGAGCTCCCTCAACCAACCTCTGCTCCAGCAACTCACATAATCTTGGTCAAAATGGGCTGGATGACTCAGTGAGCAC--AGGGggcaaggaggctgctctctgctggtcgtggatttcgtcagttgagatgtgaccaaccgggagacactcaggtttgctccaaacctgttgatgccacctgtgatccttactagtgtcagaggcatttgaaccagagcgactccatcttgaataggggctggatgaaatga s panTro5.chr7_NW_015973503v1_random 6301 274 + 11459 AAGACACTGTGAT-TAC-----CTACAGTGGGAGCTCCCTCAACCAACCTCTGCTCCAGCAACTCACATAATCTTAGTCAAAATGGGCTGGATGACTCAGTGAGCAC--AGGGggcaaggaggctgctctctgctggtcgtggatttcgtcagttgagatgtgaccaaccgggagacactcaggtttgctccaaacctgttgatgccacctgtgatccttactagtgtcagaggcatttgaaccagagtgactccatcttgaataggggctggatgaaatga i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 89314 274 - 432965 AACACACTGTGAT-TAC-----ATACAGTGGGAGCTCCCTCAACCAACCTCTGCTCCAGCAACTCACATAATCTTGGTCAAAATGGGCTGGATGACTCAGTGAGCAC--GGGGggcaaggaggctgctctctgctggtcgtggatttcgtcagttgagatgtgaccaaccgggagacactcaggtttgctccaaacctgttgatgccacctgtgatccttactagtgtcagaggcatttgaaccagagcgactccatcttgaataggggctgggtgaaatga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 148500 274 + 85365473 AAGGCACTGTGAT-TAC-----ATACAGTGGGAGCTCCCTCAACCAACCTCTGCTCCGACAACTCACACAATCTTGGTCAAAATGGGCTGAGCGACTCAGTGAGCAC--GGGGggcaaggaggctgctctctgccagtcgtggattccgtcagttgagatgtgaccaaccaggagacactcaggtttgctccaaacctgttgatgccacctgtaatccttactagtgtcagaggcatttgaaccagagtgactccatcttgaataggggctgggtgaaatga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33995337 276 + 185818997 AAGACACTGTGAT-TAC-----AAACAGCGGGAGCTCTGTCAACCAACCTCTGCTCCCACAACTCACATAATCTTGGTCAAAATGGGCTGGATGACTCAGTGAGCCCCAGGAGggcgaggagcctgctctctgctggtcgtgaatttcgtcagtggagatgtgaccgaccagaagaccctcaggtttgctccaaacctgttgatgccacctgcgatccttactagtgtcagaggcatttgaaccagagcaactccatcttgaacaggggctgggtgaaatga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33611488 276 + 192294377 AAGACACTGTGAT-TAC-----AAACAGCGGGAGCTCTGTCAACCAACCTCTGCTCCCACAACTCACATAATCTTGGTCAAAATGGGCTGGATGACTCAGTGAGCCCCAGGAGGGCGAGGAGCCTGCTCTCTGCTGGTCGTGAAtttcgtcagtggagatgtgaccgaccagaagaccctcaggtttgctccaaacctgttgatgccacctgtgatccttactagtgtcagaggcatttgaaccagagcaactccatcttgaacaggggctgggtgaaatga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4378084 276 - 9440265 AAGACACTGTGAT-TAC-----AAACAGCGGGAGCTCTGTCAACCAACCTCTGCTCCCACAACTCACATAATCTTGGTCAAAATGGGCTGGATGACTCAGTGAGCCCCAGGAGggcgaggagcctgctctctgctggtcgtgaatttcgtcagtggagatgtgaccgaccagaagaccctcaggtttgctccaaacctgttgatgccacctgtgatccttactagtgtcagaggcatttgaaccagagcgactccatcttgaacaggggctgggtgaaatga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16966604 276 - 21915920 AAGACACTGTGAT-TAC-----AAACAGCGGGAGCTCCGTCAACCAACCTCTGCTCCCACAGCTCACATAATCTTGGTCAAAATGGGCTGGATGACTCAGTGAGCCCCAGGGGGGCGAGGAGCCTGCTCTCTGCTGGTCGTGAAtttcatcagtggagatgtgaccgaccagaagaccctcaggtttgctccaaacctgttgatgccacctgtgatccttactagtgtcagaggcatttgaaccagagcgactccatcttgaacaggggctgggtgaaatga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 102800 275 - 21531802 AAGACACTGTGAT-TAC-----AAATAGCGGGAGCTCCCTCAACCAACCTCTGCTCCCACAACTCACATAATCTTGGTCAAAATGGGCTGGATGACTCAGTGAGCCCCAGGGCGGTGAGGAGCCTGCTCTCTGCT-GTCGTGAAtttcatcagtggagatgtgactgaccagaagaccctcaggtttgctccaaacctgttgatgccacctgtgatccttactagtgtcagaggcatttgaaccagagcgacaccatcttgaacaggggctgggggaaatga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 126714 273 - 2515279 AAGACACTGTGAT-TAC-----AAACAGTGGGAGCTCCGTCAACCAATCTGTGCTCCCACAACT--CATAATCTTGGTCAAAATGGGCTGGATGACTCAGTGAGCCCCAGGG-GGTGAGGAGCCTGTTCTCTGCTGGTTGTGAAtttcgtcagtggagatgtgactgaccagaagaccctcaggtttgctccaaacctgttgatgccacctgtgatccttactagtgtcagaggcatttgaaccagagcgactccatcttgaacaggggctgggtgaaatga i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 292614 275 + 6586416 AAGACACTGTGAT-TAC-----AAACAGTGGGAGCTCCCTCAACCAACCTCTGCTCCCACAGCTCACATAATCTTGGTCAAAATGGGCTGGATGACTCAGTGAGCCCCAGGGGggcgaggaggctgctctctgct-gtcgtggatttcgtcagtggagatgtgaccgaccagaagaccctcaggtctgctccaaacctgttgatgccacctgtgatccttactagtgtcagaggcatttgaaccagagcgactccatcttgaacaggggctgggggaaatga i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 20799 208 + 138751 AAGATACTGTGAT-TACTCCTACTATAGTAGGAGTTCCTTCAACCAACCTCTGCTCCAACAACTCACATAATCTTCGTCAAAATGGGCTGGATGACTCA-------------------------------------------------------------------------GAGACACTTAGGTTTTCTCCAAACCTGTTTATGCCACCTGTGATCCTTACTAGtgtcagaggcatttgaaacagagcaactccatcttgaataggggctgggtgaaatga i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 501041 274 - 2125214 aaGACACTGTGAT-TAC-----ATACAGTGGGTGTTCCCTCAACCAACCTCTGCTCCAACAACTCACATAATATTGGTCAAAATGGGCTGGATGACTAAGTGAGCGC-AGGTGGGCAAGG-GGCTGCTCCTTGCTTGTTGTGGAtttcatcagttgagatgtggccaaccaggagacacttaggtttgctccaaacctgcttacaacacctgtgatccttactagtgtcagaggcatttgaaacagagcaactccatcttgaataggggctgggtgaaatga i cebCap1.NW_016107703v1 I 2125 C 0 s otoGar3.GL873611 2232912 254 - 8137123 AAGAAATTATAATACAC-----ATGTAGTGGGAGCTCCTTTAACCAACCTCTGCTTTGCCAACTCACGTAATTTTTGTCTCAATGGGCTCGATGCCTTAATAAATGC---------AGgtaggctactttct--tgtttgtgggcttccttagatgagatgtaaccaaccaggaggcggt-gtgtttgctccaaacccatggatgccacttg-------ttcttgtgtgag----acttaaacatatgtaaaccaattacatatcagtgcaaaatgaaagaa i otoGar3.GL873611 C 0 I 341 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=57258.000000 s hg38.chr7_KI270899v1_alt 128496 8 + 190869 ggctgaga s panTro5.chr7_NW_015973503v1_random 6575 8 + 11459 ggctgaga i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 89588 8 - 432965 ggctgaga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 148774 8 + 85365473 ggctgaga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33995613 8 + 185818997 ggctgaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33611764 8 + 192294377 ggctgaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4378360 8 - 9440265 ggctgaga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16966880 8 - 21915920 ggctgaga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 103075 8 - 21531802 ggctgaga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 126987 8 - 2515279 ggctgaga i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 292889 8 + 6586416 ggctgaga i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 21007 8 + 138751 ggtcgaga i calJac3.chrUn_GL286444 C 0 I 1873 s cebCap1.NW_016107703v1 501315 8 - 2125214 ggctgaga i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2233166 341 - 8137123 I e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=2326069.000000 s hg38.chr7_KI270899v1_alt 128504 517 + 190869 cctgtgggc--tgtaaccccaggaagttcagtgttcttagtcacaggatgag-taggaggtccgcacaaggtacaagtcacaaagaccctgctgataaaacagaatatggtaacgaagctggctgaaaccaagacggcaacgaaagtga-cctctggtcaccctcactcctcgctatacactaattataatgcactagcatgctaagagacactcccaccagtgc-atgacag-tttacagatgccatggcaatgtcaggaagctaccccatgtggtct-aaaaaggggaggaaccctcagttacaggaattgcccacccctttcccagcaaaatcttgaatgatccaccccttgtt----tagcatatcatcaagaaataaccataagtatattcagttgagcagcggacatcactgcttttcctacagagtagccattctttcattcctttactttcttaacaaacttgctttcactttatggactagccccgaattctttcttgcacgaggtttaagatcccc--tt s panTro5.chr7_NW_015973503v1_random 6583 517 + 11459 cctgggggc--tgtaaccccaggaagttcagtgttcttagtcacaggataag-taggaggtctgcacaaggtacaagtcacaaagaccctgctgataaaacagaatatggtaacgaagctggctgaaaccaagacggcaacgaaagtga-cctctggtcaccctcactcctcgctatacactaattataatgcactagcatgctaagagacactcccaccagtgc-atgacag-ttcacagatgccatggcaatgtcaggaagctaccccatgtggtct-aaaaaggggaggaaccctcagttacaggaattgcccacccctttcccggcaaaatcttgaatgatccaccgcttgtt----taggatatcatcaagaaataaccataagtatattcagtcgagcagccgacatcactgcttttcctacggagtagccattctttcattcctttacttgcttaacaaacttgctttcactttatggactagccccgaattctttcttgcacgaggtttaagatcccc--tt i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 89596 516 - 432965 cctgtgggc--tgtaaccccaggaagttcagtgttcttagtcacaggatgag-taggaggcctgcacaaggtacaagtcacaaagaccctgctgataaaacagaatatggtaacgaagctggctgaaaccaagacggcaacggaagtga-cctctggtcacccccgctcctcgctatacactaattgtaatgcactagcacgctaagagacactcccaccagtgc-atgacagttttacagacgccatggcaatgtcaggaagcta-cccatgtggtctaaaaaaggggaggaaccctcagttac-ggaattgcccacccctttcctggcaaaatcttgaatgatccacc-cttgtt----tagcgtatcatcaagaaataaccataagtatattcagtcgagcagcccacatcactgcttttcctacggagtagccattctttcattcctttactttcttaacaaacttgctttcactttatggactagccccgaattccttcttgcgcgaggtttaagatcccc--tt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 148782 512 + 85365473 cctgtgggc--tgtatccccgggaagttcagtgttcttagtcacaggatgag-taggaggttggcacaagacacaagtcacaaagaccctgctgagaaaacagaatacagtaacgaagcaggctgaaaccaagatggcgatgaaagtaa-cctctggtcaccctcactcctcgttatacactaagtgtaatgcactaccatgctaagaggcactcccaccagtgc-ctgacag-tttacagacgccatggcaatgtcaggaagctaccctatatggtct-aaaaaggggaggaacactcagtttcaggaattgcccacccctttcccggcaaactcatgaatgatccaccccttgtt----tagcatatcatcaagagataacta----tatattcagtcgagcagcccacaccaccgcttttcctgcagagtagtcgttcttt-attcccttactttcctaataaacttgctttcactttatggactcgccccaaattctttcttgcacgaggtttaggaacccc--tt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33995621 477 + 185818997 cctgtgggc--tgcatccctgggaagttaagcgttcttagtcacaggatgag-taggaggtgggcaggagatataggtcacaaagaccctgctgataaaacagaatatggtaacgaagctggctgaaaccaagacggtgatgaaagtgt-cctctggtcaccctcactcctcattatacactaattataacgcatgag-----------------------------------------------catggcagtgtcaggaagctaccctatgtggtct-aaaaaggggagcagccctcagttacaggaattacccaccactttcccggcaaactcatgaatgacccaccccttgttatcaagaaatatcatcaagaaataactgtaagtgtatttggtttgg-agcccacaccactggtttgcctacagagtagcggttctttcattcctttactttcttcataaacttgctttcactttgtggactcaccccaaattctttcttgcacgaggtttaagaacccccttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33611772 477 + 192294377 cctgtgggc--tgcatccctgggaagttaagcgttcttagtcacaggatgag-taggaggtgggcaggagatataggtcacaaagaccctgctgataaaacagaatatggtaacgaagctggctgaaaccaagacggtgatgaaagtgt-cctctggtcaccctcactcctcattatacactaattataacgcacgag-----------------------------------------------catggcagtgtcaggaagctaccctatgtggtct-aaaaaggggagcagccctcagttacaggaattacccaccactttcccggcaaactcatgaatgacccaccccttgttatcaagaaatatcatcaagaaataactgtaagtgtatttggtttgg-agcccacaccactggtttgcctacagagtagcggttctttcattcctttactttcttcataaacttgctttcactttgtggactcaccccaaattctttcttgcacgaggtttaagaacccccttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4378368 471 - 9440265 cctgtgggc--tgcatccctgggaagttaagcgttcttagtcacaggatgag-taggaggtgggcaggagatataggtcacaaagaccctgctgataaaacagaatatggtaacgaagctggctgaaaccaagacggtgatgaaagtgt-cctctggtcaccctcactcctcattatacactaattataacgcacgag-----------------------------------------------catggcagtgtcaggaagctaccctatgtggtct-aaaaaggggagcagccctcagttacaggaattacccaccactttcccggcaaactcatgaatga------ccttgttatcaagaaatatcatcaagaaataactgtaagtgtatttggtttgg-agcccacaccactggtttgcctacagagtagccgttctttcattcctttactttcttcataaacttgctttcactttgtggactcaccccaaattctttcttgcacgaggtttaagaacccccttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16966888 477 - 21915920 cctgtgggc--tgcatccccaggaagttaagcgttcttagtcacaggatgag-taggaggtcggcaggagatataggtcacaaagaccctgctgataaaacagaatatggtaacgaagctggctgaaaccaagacggtgatgaaagtgt-cctctggtcaccctcactcctcattatacactaattataacgcacgag-----------------------------------------------catggcagtgtcaggaagctaccctatgtggtct-aaaaaggggagcagccctcagttacaggaattacccaccactttcccagcaaactcatgaatgacccaccccttgttatcaagaaatatcatcaagaaataactgtaagtgtatttggtttgg-agcccacaccactgctttgcctacagagtagccgttctttcattcctttactttcttcataaacttgctttcactttgtggactcaccccaaattctttcttgcacgaggtttaagaacccccttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 103083 477 - 21531802 cctgtgggc--tgcatccccgggaagttaagggttcttagtctcaggatgag-taggaggtcagcatgagatataggtcacaaagaccctgctgataaaacagaatgtggtaacgaagctggctgaaaccaagatggtgatgaaagtgt-cctctggtcaccctccctcctcattatacactaattataacgcacgag-----------------------------------------------catggcagtgtcaggaagctaccctatgtggtct-aaaaaggggagcagccctcagttacagaaattacccaccactttcccggcaaactcatgaatgacccaccccttgttatcaagaaatatcatcaagaaataactgtaagtgtatttggtttgg-agcccacaccaccgctttgcctatggagtagccgttctttcattcctttactttcttcataaacctgctttcactttgtggactcgcctcaaattctttctcgcccgaggtttaagaaccctctct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 126995 477 - 2515279 cctgtgggc--tgcatccccaggaagttaagcgttcttagtcacaggatgag-taggaggtcggcaggagatataggtcacaaagaccctgctgataaaacagaatatggtaacgaagctggctgaaaccaagacggtgatgaaagtgt-cctctggtcaccctcactcctcattatacactaattataacgcacgag-----------------------------------------------catggcagtgtcaggaagctaccctatgtggtct-aaaaaggggagcagccctcagttacaggaattacccaccactttcccggcaaactcatgaatgacccaccccttgttatcaagaaatatcatcaagaaataactgtaagtgtatttggtttgg-agcccacaccactgctttgcctacagagtagccgttctttcattcctttactttcttcataaacttgctttcactttgtggactcaccccaaattctttcttgcacgaggtttaagaacccccttt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 292897 481 + 6586416 cctgtgggctatgcatctccgggaagttaagcgttcttcgtcacaggatgag-taggaggtcggcatgagatataggtcacaaagaccctgctgataaaacagaatatggtaacgaagctggctgaaaccaagatggtgatgaaagtgtccctctggttgccctcactcttcattatacactaattataacgcatgag-----------------------------------------------catggcagtgtcaggaagctaccctatgtggtct-gaaaaggggagcaaccctcagttacaggaattacccaccactttcctggcaaactcaggaatgacccaccccttgttatcaagaaatatcatcaagaaataactgtaagtatatttggtcgagcagcccacaccactgctttgcctatggagtagccgttctttcattcctttactttcttcataaacttgctttcactttgtggactcaccccaaattctttcttgccagaggtttaagaaccctctct i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 501323 512 - 2125214 cctccgggc--tacatccc-aggaagttaagtgttcttagtcactgcatgagataaaaggtcagcacaagatataggtcacaaataccctgctgataaaacagaatatggtaaagaagctggctgaaaccaagatggcaatgaaggtga-cctctggtcatcctcactcctcattatacactaattac-atgcactagcatgtt--gagaccctcccaccagtgtgatgacag-tttacaaatgccatggcaatgtcaagaagttaccctatagggtct-aaaaaggggaggaaccctcagttatgggaattgcccaccccgttcccagaaaactcatgaataatccaccccttgtt----tagcatatcgtcaagaaataactataagtgtaatcagtcgagcagcccaca-cactgcttttcccatggaatagccattctttttttcccttactttcttaataaacttgccttcattttatggactc-cctcaaattctttctcgtacaaggtttaagaacctc---t i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2233166 341 - 8137123 I e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 21015 1873 + 138751 I a score=2065028.000000 s hg38.chr7_KI270899v1_alt 129021 378 + 190869 cttggggtctgga--ttgaga---ccctgttccagtaacaccatgaaacttaattcaacattatgtaacc-tattacatatcagtgcaaaatgacag------------------------------------------aaagttgtttctacataaacctagataagtgatttgggaaaacaaggtcaaggtaacttgaggctgctttaaaaattgcttttgaattaggtatagacaagatgactcttaaaaatgaaaactaattggtgaacgtttggagaaattctggtcttagattgtctt---a-aaatgtgcccaacttcttggtccactt-taaaaaata-tgaaattgggtgg-ctaggaaggagagttaagcctggggtttacacta----aagaagaagaagaacttcaatcagcagaccaatgctaa s panTro5.chr7_NW_015973503v1_random 7100 378 + 11459 cttggggtctgga--ttgaga---ccctgttccagtaacaccatgaaacgtaattcaacattatgtaacc-tattacatatcagtgcaaaatgacag------------------------------------------aaagttgtttctacataaacctagataagtgatttgggaaatcaagatcaaggtaacttgaggctgctgtaaaaattgcttttgaattaggtatagacaagatgactcttaaaaatgaaaactaattggtgaacgtttggagaaattctggtcttagattgtctt---a-aaatgtgcccaacttcttggtccactt-taaaaaata-tgaaattggatgg-ctaggaaggagagttaagcctggggtttatacta----aagaagaagaagaacttcaatcagcagaccaatgctaa i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 90112 378 - 432965 cttggggtctgga--ttgaga---ccctgttccagtaacaccatgaaacttaattcaacattatgtaacc-tattacatatcagtgcaaaatgacag------------------------------------------aaagttgtttctacataaacctagataagtgatttgggaaatcaagatcaaggtaaattgaggctgctttaaaaattgcttttgaattagctatagacaagatgacccttaaaaatgaaaactaattggtgaatgtttggagaaattctggtcttagattgtctt---a-aaatgtgcccaacttcttggtccactt-taaaaaaca-tgaaattgggtgg-ctaggaaggagagttaagcatggggtttatacta----aagaagaagaagaacttcaatcagcagaccaatgctaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 149294 373 + 85365473 cttggggtctgga--ttgagt---ccctgttccagtaatactatgaaacctaattcaacattatgtaaccttactacatatcagtgcaaaatgaaag------------------------------------------gaagttgtttctacataaacctagataaatgatttgggaaatcaagatcaaggcaacttgaggctgctttaaaaattgcttttgaattaggtattgacaagatgactcttaaaaatgaaaactaattggtgaacgtttggagaaattctggtcttagattgtttt---a-aaatgtgcccaactgcttggtccactt-taaaaaata-tgaaattgggtgg-ctaggaaggagagttaagactggggtttatacta----------aagaagaacttcaatcagcagactaatgctaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33996098 374 + 185818997 ctcggggtctgga--tcggga---ccctgttccagtaacactgtgaaacttaattcaacattatgtaacc-ttttacacatgaatgcaaaatga----------------------------------------------aagttgtttctacataaacctggataaatgatttgggaaatcaagatccaggcaagttgaggctgctttaaaaattgcttttgaattaggtatagactagatgactcctaaaaatgaaaaataattgctgaacgtttggagaaattctggtcttagattgtttt---g-aaatgtgcccaacttcttggtccactt-taaaaaata-tgaaattgggtgg-ctaggaaggagagtgaagactggggtttatacta----aaaaagaagaagaacttcaatcagtagaccaatgctaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33612249 374 + 192294377 ctcggggtctgga--tcggga---ccctgttccagtaacactgtgaaacttaattcaacattatgtaacc-ttttacacatgaatgcaaaatga----------------------------------------------aagttgtttctacataaacctggataaatgatttgggaaatcaagatccaggcaagttgaggctgctttaaaaattgcttttgaattaggtatagactagatgactcctaaaaatgaaaaataattgctgaacgtttggagaaattctggtcttagattgtttt---g-aaatgtgcccaacttcttggtccactt-taaaaaata-tgaaattgggtgg-ctaggaaggagagtgaagactggggtttatacta----aaaaagaagaagaacttcaatcagtagaccaatgctaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4378839 373 - 9440265 ctcggggtctgga--tcggga---ccctgttccagtaacactgtgaaacttaattcaacattatgtaacc-ttttacacatcaatgcaaaatga----------------------------------------------aagttgtttctacataaacctggataaatgatttgggaaatcaagatccaggcaagttgaggctgctttaaaaattgcttttgaattaggtatagactagatgactcctaaaaatgaaaaataattgctgaacgtttggagaaattctggtcttagattgtttt---g-aaatgtgcccaacttcttggtccactt-taaaaaata-tgaaattgggtgg-ctaggaaggagagtgaaga-tggggtttatacta----aaaaagaagaagaacttcaatcagtagaccaatgctaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16967365 374 - 21915920 ctcggggtctgga--tcggga---ccctgttccagtaacactgtgaaacttaattcaacattatgtaacc-ttttacacatcaatgcaaaatga----------------------------------------------aagttgtttctacataaacctggataaatgatttgggaaatcaagatccaggcaagttgaggctgctttaaaaattgcttttgaattaggtatagactagatgactcctaaaaatgaaaaataattgctgaacgtttggagaaattctggtcttagattgtttt---g-aaatgtgcccaacttcttggtccactt-taaaaaata-tgaaattgggtgg-ctaggaaggagagtgaagactggggtttatacta----aaaaagaagaagaacttcaatcagtagaccaatgctaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 103560 374 - 21531802 ctcggggtctgga--ttggga---ccctgttccagtaacactaggaaacttaattcaacattatgtaacc-ttttacacatcaatgcaaaatga----------------------------------------------aagttgtttctacataaaactggataaatgatttgggaaatcaagattgaggcaagttgaggctgctttaaaaattgcttttgaattaggtatagactagatgactcttacaaatgaaaaataattgctgaacgtttggagaaattctggtcttagattgtttt---g-aaatgtgcccaacttcttggtccactt-taaaaaata-tgaaattgggtgg-ctaggaaggagagtgaagactggggtttatacta----aaaaagaagaagaacttcaatcagcagaccaatgctaa i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 127472 374 - 2515279 ctcggggtctgga--tcagga---ccctgttccagtaacactgtgaaacttaattcaacattatgtaacc-ttttacacatcaatgcaaaatga----------------------------------------------aagttgtttctacataaacctggataaatgatttgggaaatcaagatccaggcaagttgaggctgctttaaaaattgcttttgaattaggtatagactagatgactcctaaaaatgaaaaataattgctgaacgtttggagaaattctggtcttagattgtttt---g-aaatgtgcccaacttcttggtccactt-taaaaaata-tgaaattgggtgg-ctaggaaggagagtgaagactggggtttatacta----aaaaagaagaagaacttcaatcagtagaccaatgctaa i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 293378 374 + 6586416 ctcggggtttgga--tcggga---ccctgttccagtaacactatgaaacttaattcaacattatgtaacc-tttgacacatcaatgcaaaatga----------------------------------------------aagttgtttctacataaacctggataaatgatttgggaaattgagatccaggcaagctgaggttgctttaaaatttgcttttgaattaggtgtagactagatgactcttaaatgtgaaaaataattgctgaacgcttggagaaattctggtcttcgattgtttt---a-aaatgtgcccaacttcttggtccactt-taaaaaata-tgaaattgggtgg-ctaggaaggagagtgaagactggggtttattcta----aaaaagaagaagaacttcaatcagcagactaatgctaa i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 501835 418 - 2125214 cttggggtctgga--tcagga-ggaccctttccagtaacactatggaacttaattaaacattctgtaacc-tattatacataggtgcaaaatgaaagagagttgGGTTTTTTTTTTTTTCCCAGGAAGAGTGTTAGAAAAAATttgtttctaaataaacctagataaatgattcaggaaatcaagatcaaggcaagttgaagctgctttaaaaattgattttgaattaggtatagacaagatgactcttaaaaatgaaaaataattggtgaacgtttggagaaattctggtcttagattgttttaaaa-aaatatgaac-actttttggtccactt-taaaaaata-tgaaattgggtag-cca-gaagaagaattaagactggggtttatatta----aaaaagaagaaa---tccaatcagcagatcaat--TAA i cebCap1.NW_016107703v1 C 0 I 306 s otoGar3.GL873611 2233507 335 - 8137123 cttaagcccaggagtttgagattgctgtgtgcta-tgatgccatgacactccacccagg------------tg------------gcagagtga---------------------------------------------gactctgtcttaaaaaaaaacaaaacaaa--------aaaacccaaataaaaATAAaat------------aaaatttgctttgagtttgatatagacaaga-------taaaaatgaaaaacaagttgtatacatttggaaaaattctggctttagattgcctt---gtaaatgtattcatggtctcagttcgcttgtaaaaaatactgagattgggtagcctaggaagaagaattaagacagtggtttatacTATTATAAAAAGAAGACTAA--TAATTCAGAAGCCCAATGCTAA i otoGar3.GL873611 I 341 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 21015 1873 + 138751 I a score=397768.000000 s hg38.chr7_KI270899v1_alt 129399 68 + 190869 atacaagcttgtccctatatggaaatatCTAGATTCATGAATGGAGCCAGAAGTGGCCAGATGGTGAT s panTro5.chr7_NW_015973503v1_random 7478 68 + 11459 atacaagcttgtccctatatggaaatatCTAGATTCATGAATGGAGCCAGAAGTGGCCAGATGGTGAT i panTro5.chr7_NW_015973503v1_random C 0 I 186 s gorGor5.CYUI01015914v1 90490 64 - 432965 atccaagcttgtccctatatggaaatatCTAGATTCATGAATGG----AGAAGTGGCCAGATGGTGAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 149667 68 + 85365473 atacaagcttgtccctatatggaaatatCTAGATTCATGAATGGAGCCAGAAGTGACCAGATGGTGAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33996472 67 + 185818997 atac-agcttgtccctatatggaaatatCTAGATTCAGGAATGGAGCCAGAAGTGGCCAGATGGTGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33612623 67 + 192294377 atac-agcttgtccctatatggaaatatCTAGATTCAGGAATGGAGCCAGAAGTGGCCAGATGGTGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4379212 67 - 9440265 atac-agcttgtccctatatggaaatatCTAGATTCAGGAATGGAGCCAGAAGTGGCCAGATGGTGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16967739 67 - 21915920 atac-agcttgtccctatatggaaatatCTAGATTCAGGAATGGAGCCAGAAGTGGCCAGATGGTGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 103934 67 - 21531802 atac-agcttgtccctatatggaaaTACCTAGATTCAGGAATGGAGCCAGAAGTGGCCAGATGGTGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 127846 67 - 2515279 atac-agcttgtccctatatggaaatatCTAGATTCAGGAATGGAGCCAGAAGTGGCCAGATGGTGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 293752 67 + 6586416 atac-agcttgtccctatatGGAGATATCTAGATTCAGGAATGGAGCCAGAAGTGGCCAGATGGTGAC i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 502559 68 - 2125214 ATACAAGCTTGTCCCTATACGGAAATATCCAGATTCATGAATGGAGCCAGAAGTGGCCAGACAGTGAT i cebCap1.NW_016107703v1 I 306 I 3 s otoGar3.GL873611 2233842 65 - 8137123 --ACAAGTGTTTCCCTATACAGAAATACCCAGATCCATGACTGTGGT-ATAACTGGCCAAAGAAtgag i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 21015 1873 + 138751 I a score=-311.000000 s hg38.chr7_KI270899v1_alt 129467 6 + 190869 ---GACGAC s panTro5.chr7_NW_015973503v1_random 7732 6 + 11459 ---GACGAC i panTro5.chr7_NW_015973503v1_random I 186 C 0 s gorGor5.CYUI01015914v1 90554 5 - 432965 ---GATGA- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 149735 5 + 85365473 ---GACGA- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33996539 3 + 185818997 ---GAC--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33612690 3 + 192294377 ---GAC--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4379279 3 - 9440265 ---GAC--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16967806 3 - 21915920 ---GAC--- i cerAty1.NW_012002954v1 C 0 I 261 s chlSab2.chr28 104001 3 - 21531802 ---GAC--- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 127913 3 - 2515279 ---GAC--- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 293819 3 + 6586416 ---GAC--- i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 502630 3 - 2125214 ---GGC--- i cebCap1.NW_016107703v1 I 3 C 0 s otoGar3.GL873611 2233907 6 - 8137123 gaagat--- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 21015 1873 + 138751 I a score=175617.000000 s hg38.chr7_KI270899v1_alt 129473 31 + 190869 CAGAGGGAGGGTTGGAGGCCTGGGACTGGGG s panTro5.chr7_NW_015973503v1_random 7738 31 + 11459 CAGAGGGAGGGTTGGAGGCCTGGGACTGGGG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 90559 31 - 432965 CAGAGGGAGGGTTGGAGGCCTGGGACTGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 149740 30 + 85365473 CCGGGggaggg-tggaggcctgggactgggg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33996542 31 + 185818997 CAGAGGGAGGGCTGGAGGCCCAGGACTGGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33612693 31 + 192294377 CAGAGGGAGGGCTGGAGGCCCAGGACTGGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4379282 31 - 9440265 CAGAGGGAGGGCTGGAGGCCCAGGACTGGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16968070 31 - 21915920 CAGAGGGAGGGCTGGAGGCCTGGGACTGGGG i cerAty1.NW_012002954v1 I 261 C 0 s chlSab2.chr28 104004 31 - 21531802 CAGAGGGAGGGCTGGAGGCCCGGGACTGGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 127916 31 - 2515279 CAGAGGGAGGGCTGGAGGCCCGGGACTGGGG i manLeu1.NW_012101810v1 C 0 M 294 s colAng1.NW_012117710v1 293822 31 + 6586416 CAGAGGGAGGGTTGGAGGCCCGGGACTGGGG i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 502633 31 - 2125214 CAGAGGGAGGGTTGGAGGCCTgggattggga i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2233913 19 - 8137123 cagaagaagg--tagtggcct---------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 21015 1873 + 138751 I a score=64943.000000 s hg38.chr7_KI270899v1_alt 129504 14 + 190869 CGTTGGCTAGGAAG s panTro5.chr7_NW_015973503v1_random 7769 14 + 11459 CTTTGGCTAGGAAG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 90590 14 - 432965 CGTTGGCTAGGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 149770 14 + 85365473 cgttggctaggagg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33996573 14 + 185818997 CGTTGGCTAGGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33612724 14 + 192294377 CGTTGGCTAGGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4379313 14 - 9440265 CGTTGGCTAGGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16968101 14 - 21915920 CGTTGGCTAGGAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104035 14 - 21531802 CGTTGGCTAGGAAG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 293853 14 + 6586416 TGTTGGCTAGGAAG i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 502664 14 - 2125214 tgtgggctaggaag i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2233932 0 - 8137123 C e canFam3.chr6 61026749 1212 - 77573801 I e manLeu1.NW_012101810v1 127947 294 - 2515279 M e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 21015 1873 + 138751 I a score=4911.000000 s hg38.chr7_KI270899v1_alt 129518 10 + 190869 GGGTGGG----------------------------------------------------------------------------------------------AAT s panTro5.chr7_NW_015973503v1_random 7783 10 + 11459 GGGTGGG----------------------------------------------------------------------------------------------AAT i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 90604 10 - 432965 GGGTGGG----------------------------------------------------------------------------------------------AAT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33996587 104 + 185818997 GGGTGGGAATATTCATGAATGGAGCCAGAAGTGGCCAGATGGTGACGACCAGAGGGAGGGCTGGAGGCCCGGGACTGAGGCGTTGGCTAGGAAAGGGTGGAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33612738 10 + 192294377 GGGTGGG----------------------------------------------------------------------------------------------AAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4379327 10 - 9440265 GGGTAGG----------------------------------------------------------------------------------------------AAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16968115 10 - 21915920 GGGTGGG----------------------------------------------------------------------------------------------AAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104049 10 - 21531802 GGGTGGG----------------------------------------------------------------------------------------------AAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 128241 10 - 2515279 GGGTGGG----------------------------------------------------------------------------------------------AAT i manLeu1.NW_012101810v1 M 294 C 0 s colAng1.NW_012117710v1 293867 10 + 6586416 GGGTGGG----------------------------------------------------------------------------------------------AAT i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 502678 4 - 2125214 gggt---------------------------------------------------------------------------------------------------- i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2233932 0 - 8137123 C e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 21015 1873 + 138751 I e nomLeu3.chr20 149784 0 + 85365473 C a score=284760.000000 s hg38.chr7_KI270899v1_alt 129528 72 + 190869 ATTCATGAATGG----AGAAGTGGCCAGATGGTGATGACGACCAGAGGGAgggttggaggtccaagactggggcgt s panTro5.chr7_NW_015973503v1_random 7793 72 + 11459 ATTCATGAATGG----AGAAGTGGCCAGatggtgatgacgaccagagggagggttggaggcatgggactggggcgt i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 90614 72 - 432965 ATTCATGAATGG----AGAAGTGGCCAGATGGTGATGATGACCAGAGGGAgggttggaggcctgggactggggcgt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33996691 73 + 185818997 ATTCATGAATGGAGCCAGAAGTGGCCAGATGG---TGACGACCAGAGGGAGGGCTGGAGGCCCGGGACTGGGGCGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33612748 73 + 192294377 ATTCATGAATGGAGCCAGAAGTGGCCAGATGG---TGACGACCAGAGGGAGGGCTGGAGGCCCGGGACTGAGGCGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4379337 73 - 9440265 ATTCATGAATGGAGCCAGAAGTGGCCAGATGG---TGACGACCAGAGGGAGGGCTGGAGGCCCGGGACTGAGGCGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16968125 73 - 21915920 ATTCATGAATGCAGCCAGAAGTGGCCAGATGG---TGACGACCAGAGGGAGGGTTGGAGGCCTgggactggggagc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104059 73 - 21531802 ATTCATGAATGGAGCCAGAAGTGGCCAGATGG---TGACGACCAGAGGGAGGGTTGGAGGCCTGGGACTGAGGCGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 128251 73 - 2515279 ATTCATGAATGCAGCCAGAAGTGGCCAGATGG---TGATGACCAGAGGGAGGGTTGGAGGCCtgggactggggagc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 293877 73 + 6586416 ATTCATGAATGGAGCCAGAAGTGGCCAGATGG---TGAGGACCAGAGGGAGGTCTGGAGGCCCAGGACTGGGGCGT i colAng1.NW_012117710v1 C 0 I 188 s calJac3.chrUn_GL286444 22888 76 + 138751 ATTCATGAATGGAACCACAAGTGGCcagatggtgatgatggccagagggagggttggaggcctgggactgggacat i calJac3.chrUn_GL286444 I 1873 C 0 s otoGar3.GL873611 2233932 17 - 8137123 ----------------------------------------tacgtagtgagggatat------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 502682 0 - 2125214 C e nomLeu3.chr20 149784 0 + 85365473 C a score=33538.000000 s hg38.chr7_KI270899v1_alt 129600 7 + 190869 tggctag s panTro5.chr7_NW_015973503v1_random 7865 7 + 11459 tggctag i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 90686 7 - 432965 tggctag i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 33996764 7 + 185818997 TGGCTAG i rheMac8.chr3 C 0 I 376 s macFas5.chr3 33612821 7 + 192294377 TGGCTAG i macFas5.chr3 C 0 I 282 s macNem1.NW_012019910v1 4379410 7 - 9440265 TGGCTAG i macNem1.NW_012019910v1 C 0 I 376 s cerAty1.NW_012002954v1 16968198 7 - 21915920 tggctac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104132 7 - 21531802 TGGCTAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 128324 7 - 2515279 tggctgc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 294138 7 + 6586416 tggctag i colAng1.NW_012117710v1 I 188 C 0 s calJac3.chrUn_GL286444 22964 7 + 138751 gggctag i calJac3.chrUn_GL286444 C 0 C 0 s otoGar3.GL873611 2233949 7 - 8137123 tagccag i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 502682 0 - 2125214 C e nomLeu3.chr20 149784 0 + 85365473 C a score=795503.000000 s hg38.chr7_KI270899v1_alt 129607 127 + 190869 gaaggggtg-------------ggagggcctctctggagtcacagaagcctcatgcatcttgaccaggacggtggatgc-atggcttacattggtcacaacttgtcaacttgtatgactgaaaactgaacatcacattgaa s panTro5.chr7_NW_015973503v1_random 7872 127 + 11459 gaaggggtg-------------ggagggcctctctggagtcacagaagcctcatgcatcttgaccaggacggtggatgc-atggcttacattggtcacaacttgtcaacttgtatgactgaaaactgaacatcacattgaa i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 90693 126 - 432965 caa-gggtg-------------ggagggcctctctggagtcacagaagcctcatgcatcttgaccaggacggtggatgc-atggcttacattggtcacaacttgtcaacttgtatgactgaaaactgaacatcacattgaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 149784 123 + 85365473 ----gggtg-------------ggagggcctctctggagtcatggaagcctcatggatcttgaccaggacggtggctgc-atggcttacactggtcataactcgtcaacatgtatgattgaaaactgaacatcacattgaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33997147 127 + 185818997 gaaggggtg-------------ggagggcctctctggagtcgtggaagcctcatgcatcttggccaggacggtggctgc-atggcttacattggtcacaactcgtcaacatgtatgactgaaaactgaacattacgttgaa i rheMac8.chr3 I 376 C 0 s macFas5.chr3 33613110 127 + 192294377 gaaggggtg-------------ggagggcctctctggagtcgtggaagcctcatgcatcttggccaggacggtggctgc-atggcttacattggtcacaactcgtcaacatgtatgactgaaaactgaacattacgttgaa i macFas5.chr3 I 282 C 0 s macNem1.NW_012019910v1 4379793 140 - 9440265 GAAGGGGTGGGAGGGCCTCTCTGGAGGGCctctctggagtcgtggaagcctcatgcatcttggccaggacggtggctgc-atggcttacattggtcacaactcgtcaacatgtatgactgaaaactgaacattatgttgaa i macNem1.NW_012019910v1 I 376 C 0 s cerAty1.NW_012002954v1 16968205 127 - 21915920 gaaggggtg-------------ggagggcctctctggagtcgtggaagcctcgtgcatcttggccaggacggtggctgc-acggcttacattggtcacaactcgtcaacatgtatgactgaaaactgaacattACGTTGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104139 100 - 21531802 GAAGCGGTG-------------GGAGGGCCTCTCTGGAGTCGTGGAAGCCTCGTGCATCTTGGCCAGGACGGTGGCTGC-ACGGCTTACATTGGTCACAACTCGTCAACATGT---------------------------A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 128331 127 - 2515279 gaaggggtg-------------ggagggcctctctggagtcgtggaagcctcgtgcatcttggccaggacggtggctgc-acggcttacattggtcacaactcgtcaacatgtatgactgaaaactgaacattacgttgaa i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 294145 127 + 6586416 gaaggggtg-------------ggagggcctctccggagttgtggaagcctcatgcatcttggccaggacggtggctgc-acagcttacattggtcacaactcgtcaacatgtatgattgaaaactgaacattacattgaa i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 22971 118 + 138751 caaagggtg-------------ggagggcttctctggagtcatagaagcctcatgcatcttgactgggaccatggctgc-atggctta---------caactcatccacatgtatggcggaaaactgaacatttcattgaa i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 502682 119 - 2125214 --------g-------------ggagggcttctctggagtcacagaagcctcatgcatcttgactgggaccatggctgc-atggcttacattggtcccaactcatccacatgtatggctgataactgaacatttcattgaa i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2233956 127 - 8137123 aaaggagta-------------tgaggaactctctggagtgatgaaaatgtcacggatcttgcttagggcagtgggtgtaatagcatatacttgtcacatctcatcaacacgtacagtt-aaaattgaacacttccttgta i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=2302129.000000 s hg38.chr7_KI270899v1_alt 129734 429 + 190869 ttggactcaaaggcaagacctgaggcaaaattcatgtaaggagggagtttgggcgaagcttgaggactgctgcccggaagcgtagattcaagttgccctgaatacacctcctattagcagctgttacaggtgggtttttcaaggg-aaagaagaggctgttccaagttgttgaccaaggatttatgttaaagtaacataatctattgcttggctctatattgttaagccgtagggtgtgagttgcagtgtctgctgctgcactaggaggttaacctgaggcaacagccagc-gtttcaagagac-----gaatacacagctccaaggcggggagtgggaagtcactgccgcctcacttgactgcctctctgggcctgatcgtttaaaaggacttgcatcatccctcagc-acaatttctttccttttctcaattgta s panTro5.chr7_NW_015973503v1_random 7999 426 + 11459 ttggactcaaaggcaagacctgaggcaaaattcatgtaaggagggagtttgggcgaagcttgaggactgctgcccagaagcgtagattcaagttgccctgaatacacctcctattagcagctgttacaggtgggtttttcaaggg-aaagaagaggctgttccaagttgttgaccaaggatttatgttaaggtaacataatctattgcttggctctatattgttaagccgtagggtgtgagttgcagtgtctgctgctgcactagg---ttaacctgaggcaacagccagc-atttcaagagac-----gaatacacagctccaaggcggggagtgggaagtcactgccgcctcacttgactgcctctctgggcctgatcgtttaaaaggacttgcatcatccctcagc-acaatttctttccttttctcaattgta i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 90819 429 - 432965 ttggactcaaaggcaagacctgaggcaaaattcatgtaaggagggagtttgggcgaagcttgaggactgctgcccggaagcgtagattcaagttgccctgaatacacctcctattagcagctgttacaggtgggtttttcaaggg-aaagaagaggctgttccaagttgttggccaaggatttatgttaaagtaacataatctattgcttggctctatattgttaagccgtagggtgtgagttgcagtgtctgctgctgcactaggaggttaacctgaggcaacagccagt-gtttcaagagac-----gaatacacagctccaaggtggggagtgggaagtcactgccgccgcacttgactgcctctctgggcctgatcgtttaaaaggacttgcatcatccctcagc-acaatttctttccttttctcaactgta i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 149907 428 + 85365473 tTGGACTCAAAAGCAAGACCtgaggcaaaattcacgtaaggagggagtttgggggaagcttgaggattgccgcccggaagcgtagattcaagttgccctgaatacacctcctattagcagctgttacaggtgggtttttcaaggg-aaaaaagaggccgttccaagttgttgaccaagagtttatgttaaagtaacataatctattgattggctctacattgttaagctgtagggtgtgagttgcagtgtctgctgctgcactaggaggctaacctgaggcaacagccagtggtttcaagagat-----gaatacacggctccaaggcggggagtgggaagtcactgccgcctcacttga-tgcctccctgggcctgatggtttaaaaggacttgcat-atccctccac-acaatttctttccttttctcaATTGTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33997274 422 + 185818997 tTGGACTAAAAGGCAAGACCtgaggcaaaattcatgtacggagggattttggccgaagcttgaggactgccatccagaaacgtagattcgagtggccctgaatacaccgcccattagcagctgttacaggtgggtttttcaaggg-aaagaagagccagttccaagttgttgaccaagagtttatgttaaaataacataatctgtcgactggctctgcatggttaagctatagggtgtgagctgcagtgtctgc---------aggaggttaacctgaggcaacagcaagt-gatttcagagaccaaaacaaaacgcagctcccaggcggggagtgggaagtcactgctgccccatctgagcgcctctctgggcccgatgatttaaaaggactcgc---gttcctcagc-acagttgatttcctcttctcaACTGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33613237 422 + 192294377 ttggactaaaaggcaagacctgaggcaaaattcatgtacggagggattttggccgaagcttgaggactgccatccagaaacgtagattcgagtggccctgaatacaccgcccattagcagctgttacaggtgggtttttcaaggg-aaagaagagccagttccaagttgttgaccaagagtttatgttaaaataacataatctgtcgactggctctgcatggttaagctatagggtgtgagctgcagagtctgc---------aggaggttaacctgaggcaacagcaagc-gatttcagagaccaaaacaaaacgcagctcccaggcggggagtgggaagtcactgctgccccatctgagcgcctctctgggcccgatgatttaaaaggactcgc---gttcctcagc-acagttgatttcctcttctcaactgta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4379933 422 - 9440265 tTGGACTAAAAGGCAAGACCtgaggcaaaattcatgtacggagggattttggccgaagcttgaggactgccatccagaaacgtagattcgagtggccctgaatacaccgcccattagcagctgttacaggtgggtttttcaaggg-aaagaagagccagttccaagttgttgaccaagagtttatgttaaaataacataatctgtcgactggctctgcatggttaagctatagggtgtgagctgcagtgtctgc---------aggaggttaacctgaggcaacagcaagc-gatttcagagaccaaaacaaaacgcagctcccaggcggggagtgggaagtcactgctgccccatctgagcgcctctctgggcccgatgatttaaaaggactcgc---gttcctcagc-acagttgatttcctcttctcaACTGTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16968332 422 - 21915920 TTGGACTAAAAGGCAAGACCtgaggcaaaattcatgtacggagggattttggccgaagcttgaggactgccatccggaaacgtagattcgagtggccctgaatacaccgcccattagcagctgttacaggtgggtttttcaaggg-aaaaaagagccagttccaagttgttgaccaagagtttatgttaaaataacataatctgtcgactggctctgcatggttaagccatagggtgtgagctgcagtgtctgc---------aggaggttagcctgaggcaacagcaagc-gatttcagagaccaaaacaaaacgcagctcccaggcggggagtgggaagtcactgctgccccatctgagcgcctctctgggcccgatgatttaaaaggactcgc---gttcctcagC-ACAGTTGATTTCCTCTTCTCAACTGTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104239 372 - 21531802 TTGGActaaaaggcaagacctgaggcaaaattaatgtacagagggagtttggccgaagcttgaggactgccatccggaaacacagatttgagtggccctgaatacacctcccatgagcagctgttacaggtgggtttttcaaggg-aaagaagagcctgttccaagttgttgaccaagagtttatgttaaaataacataatctgtcgactggctctgcatggttaagccatagggtgtgagctgcggtgtctgC---------AGGAGGTTAAC---------------------------------------------------Ggcggggagtgggaagtcactgccgccccatctgagcgcctctctgggcccgatggtttaaaacgactcgc---attcctcagC-ACAGTTGATTTCCTCTTCTCTACTGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 128458 422 - 2515279 tTGGACTAAAAGGCAAGACCtgaggcaaaattcatgtacagagggattttggccaaagcttgaggactgccatccggaaacgtagattcgagtggccctgaatacaccgcccattagcagctgttacaggtgggtttttcaaggg-aaaaaagagccagttccaagttgttgaccaagagtttatgttaaaataacataatctgtcgactggctctgcatggttaagccatagggtgtgagctgcagtgtctgc---------aggaggttaacctgaggcaacagcaagc-gatttcagagaccaaaacaaaacgctgctcccaggcggggagtgggaagtcactgctgccccatctgagcgcctctctgggcccgatgatttaaaaggactcgc---gttcctcagc-acagttgatttcctcttctcaACTGTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 294272 416 + 6586416 tTGGACTAAAAGGCAAGGCCtgaggcaaaattcatgcacggagggagtctggtcgtagcttgaggattgccatcctgaaacgtagattcgagttgccctgaatacacctcccattagcagctgttacaggtgggtttttcaaggg-aaagaagagcccgttccaagttgttgaccaagagtttatgttaaaataacataatctgtcgactggctctgcatggttaagccacagggtgtgagctgcagggtctgc---------aggagg-taacctgaggcaacagcaagc-gtttccggagac-----tacaacgcagcttccaggctgggagtgggaagtcatggccgccccatctgagcgcctctctgggcccgatgatttaaaacgactcgc---attcctcagc-acaactgatttcctcttctcaactGTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 23089 424 + 138751 ttggactaaaaggcatgacctcaggcaaaattcatggaagtagggagtttgggcgaagcctgaggattgcca-ctggaagcagagattcaagttgccctgaataca---tctattagtagcagttataggtgggtttttcaagggaaaagaagaggtggttctaggttgtttaccaagaatttgtgttaaaataacataatctattggttggctctacattgttaagccacagggtgtgagttgtagtgtctaatactgcactattaggttaacttaaggcagcaggaagcagtttgcagacat-----gaatacacagctccaaggaggggaaagggaggtgactgccatctcatttca-tgcctctctgcacctgaccatttgaaaggacttgc---attcctgagcaaaaagttcttttcttttctcaattgta i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 502801 424 - 2125214 tTGGACTAAAAGGCAGGACCTCaggcaaaattcatgtaagaagggagtttgggtgaagcttggggattgcca-ccagaagtatagattcaagttgccctgaataca---tctattagtagcaattataggtgggtttttcaagggaaaagaagaggcggttccaagttgtttaccaagaagttatgttaaaatagcatgatctatttgttggctctacattgttaagccacagggtatgagttgtagtatctgctgctgcactattaggttaacttgaggctgcagaaagcagtttgcagacat-----gaatacacagctccaaggaggggagagggagatgactgccatctcatttca-tacctctctgggcctgaccatttgaaaggacttgc---attcctcagcaaaaagttcttttcttttcttaATTGTA i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2234083 0 - 8137123 C e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=767901.000000 s hg38.chr7_KI270899v1_alt 130163 126 + 190869 tgaaaattatacctcaataagtttactatagaaaTTAATGAGTAAATATGTATAA------GTTTTCAAGTTAAAAATATATGTAAAATATGTTTGCTCACTT-----------TTTTAAC----------------CTATCTTCAT-TGGTTTTAAAA----A s panTro5.chr7_NW_015973503v1_random 8425 130 + 11459 tgaaaattatacctcaataagtttactatagaaaTTAATGAGTAAATATGTATAA------GTTTTCAAGTTAAAAATATATGTAAAATATGTTTGCTCACTT-----------TTTTAAC----------------CTATCTTCATCTGGTTTTAAAA-TTAA i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 91248 130 - 432965 tgaaaattatacctcaataaGTTTGCTATAGAAATTAATGAGTAAATATGTATAA------GTTTTCAAGTTAAAAATATATGTAAAATATGTTTGCTCACTT-----------TTTTAAC----------------CTATCTTCAT-TGGTTTTAAGAATTAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 150335 130 + 85365473 TGAAAATTATACCTCAACAAGTTTACTACAGAAATTAATGAGTAAATATGTATAA------GTTTTCAAGTTAAAAATATATATAAAATATGTTTGCTCCCTC-----------CTTTAAC----------------CTATTTTCAC-TGGTTTTAAAAATTAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33997696 129 + 185818997 TGAAAATTACACCTCAATAAGCTTACTTCAGAAATTAATGAGTAGATACGTGTAA------GTTTTCAAGTTAAAAATATATGTAAAATACGTTTGCTCCCT------------TTTTAAC----------------CCATTTTCAC-CAGTTTTAAAAATTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33613659 129 + 192294377 tgaaaattacacctcaataagcttacttcagaaaTTAATGAGTAGATACGTATAA------GTTTTCAAGTTAAAAATATATGTAAAATACGTTTGCTCCCT------------TTTTAAC----------------CCATTTTCAC-CAGTTTTAAAAATTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4380355 129 - 9440265 TGAAAATTACACCTCAATAAGCTTACTTCAGAAATTAATGAGTAGATACGTATAA------GTTTTCAAGTTAAAAATATATGTAAAATACGTTTGCTCCCT------------TTTTAAC----------------CCATTTTCAC-CAGTTTTAAAAATTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16968754 129 - 21915920 TGAAAATTACACCTCAATAAGCTTACTTCAGAAATTAATGAGTAGATACGTATAA------GTTTTCAAGTTAAAAATATATGTAAAATACGTTTGCTCCCT------------TTTTAAC----------------CCATTTTCAC-CAGTTTTAAAAATTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104611 129 - 21531802 TGAAAATTACACCTCAATAAGCTTACTTCAGAAATTAATGAGTAGATGCGTATAA------GTTTTCAAGTTAAAAATATATGTAAAATACGTTTGCTCCCT------------TTTTAAC----------------CTATTTTCAC-CAGTTTTAAAAGTTAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 128880 129 - 2515279 TGAAAATTACACCTCAATAAGCTTACTTCAGAAATTAATGAGTAGATACGTATAA------GTTTTCAAGTTAAAAATATATGTAAAATACGTTTGCTCCCT------------TTTTAAC----------------CCATTTTCAC-CAGTTTTAAAAATTAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 294688 129 + 6586416 TGAAAATTACACCTCAATAAGTTTACTTCAGAAATTAATGAGTAGATGCGTATAA------GTTTTCAAGTTAAAAATATATGTAAACTATGTTTGCTCCCT------------TTTTAAC----------------CTATTTTTAT-CAGTTTAAAAAATTAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 23513 117 + 138751 tgaaaattatacctcaataagtttactacaaaaaTTAATGGATACAT--------------GTTTTCCAGTTGAAAACATATGTAAA-TATGTTCATTCCCTT-----------TTTTAAC----------------CTATTTTCCT-CAGTTTTAAAAA---- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 503225 123 - 2125214 TGAAAATTATACCTCAGTAAGTTTATTACAAAAATTAATGAATAGATATGCATAA------GTTTACAAGTTAAAAAC--ATGTAAA-TATGTTCACTCCCTT-----------TTTTAAC----------------CTATTTTCAT-CAGTTTTAAAAA---- i cebCap1.NW_016107703v1 C 0 I 24 s otoGar3.GL873611 2234083 156 - 8137123 tgaaaattatacctcaataaatgtattatgaag---aattagcagatattaataatgatatgTTTTCAAGTTTAAAAAATATATAAAGTGTATTTGCTTCCTTATTTTTTGTTGTTTTCACTATTTAATTGTAAAAACTATTTTTTT-TAGTTTTTACAA---- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=159709.000000 s hg38.chr7_KI270899v1_alt 130289 30 + 190869 TTAACAAACCATGA-TGGCTTTGGAAACATG s panTro5.chr7_NW_015973503v1_random 8555 30 + 11459 CTAACAAACCATGA-TGGCTTTGGAAACATG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 91378 30 - 432965 CTAACAAACCATGA-TGGCTTTGGAAACGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 150465 30 + 85365473 CTAACAAACCATGA-TGGCTTTGGAAACGTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33997825 30 + 185818997 CTCACAAACCATGA-TGTCTTTGGAAAAGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33613788 30 + 192294377 CTCACAAACCATGA-TGTCTTTGGAAAAGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4380484 30 - 9440265 CTCACAAACCATGA-TGTCTTTGGAAAAGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16968883 30 - 21915920 CTCACAAACCATGA-TGTCTTTGGAAAAGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104740 30 - 21531802 CTCACAAACCATGA-TGTCTTTGGAAAAGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 129009 30 - 2515279 CTCACAAACCATGA-TGTCTTTGGAAAAGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 294817 30 + 6586416 CTCACAAACCATGA-TGTCTTTGGAAAAGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 23630 24 + 138751 TTAACAAATCACAA-------TGGAAAAATG i calJac3.chrUn_GL286444 C 0 I 1 s otoGar3.GL873611 2234239 31 - 8137123 TTAACAACTCATGATTGCTTTTGGAAAAGTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 503348 24 - 2125214 I a score=762467.000000 s hg38.chr7_KI270899v1_alt 130319 110 + 190869 TTCTTCCATTTGTTACTTTCATAATGAAAGAAGaaatgtattttaaataacatttaaatttaattttTTCATTATCATCTGGGAAGCCCCAGC-CCTTTATGAAAGGAAAA s panTro5.chr7_NW_015973503v1_random 8585 108 + 11459 TTCTTCCATTTGTTACTTTCATAATGAA-GAAGAaatgtattttaaataacatttaatttaatttttttcattATCATCTGG-AAGCCCCAGC-CCTTTGTGAAAGGAAAA i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 91408 109 - 432965 TTCTTCCATGTGTTACTTTCATAATGAAAGAAGaaatgtattttaaataagatttaaatttaactttTTCATTATCATCTGG-GAAGCCCAGG-CCTTTATGAAAGGAAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 150495 110 + 85365473 TTCTTCCATTTGTTACTTTCATAATGAAAGAAGaaatgtattttaaataacatttaaatttaattttTTCATTATCATCTGGGAAGTCCCAGC-CCTTTATGAAACGAAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33997855 110 + 185818997 TTCTTCCATTTGTTACTTTCATAATGAAAGAAGAAACGTATTTTAAATAACATTTATATTTAATTTTGTCATTATCATCCGGGAAGCCCCAGC-TCCGTATGAAAGGAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33613818 110 + 192294377 TTCTTCCATTTGTTACTTTCATAATGAAAGAAGAAACGTATTTTAAATAGCATTTAAATTTAATTTTGTCATTATCATCCGGGAAGCCCCAGC-TCCGTATGAAAGGAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4380514 110 - 9440265 TTCTTCCATTTGTTACTTTCATAATGAAAGAAGAAACGTATTTTAAATAACATTTAAATTTAATTTTGTCATTATCATCCGGGAAGCCCCAGC-TCCGTATGAAAGGAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16968913 110 - 21915920 TTCTTCCATTTGTTACTTTCATAATGAAAGAAGAAACGTATTTTAAATAACATTTAAATTTAATTTTGTCATTATCATCCGGGAAGCCCCAGC-TCCGTATGAAAGGAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104770 110 - 21531802 TTCTTCCATTTGTTACTTTCATAATGAAAGAAGAAATGTATGTTAAATGACATTTACATTTAATTTTGTCATTATCATCCGGGAAGCCCCAGC-TCTGTATGAAAGGAAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 129039 110 - 2515279 TTCTTCCATTTGTTACTTTCATAAAGAAAGAAGAAACGTATTTTAAATAACATTTAAATTTAATTTTGTCATTATCATCCGGGAAGCCCCAGC-TCCATATGAAAGGAAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 294847 110 + 6586416 TTCTTCCATTTGTTACTGTCATAATGAAAGAAGaaatgtattttaaataacatttaaatttaattttGTCATTATCCTCCGGGAAGCCCCAGC-TCTGTGTGAAAGGAAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 23655 110 + 138751 TTCTTCCTTTTGTTACTTTCataataaaataagaaatgtattttaaataacatttaaatttaattttttCATTATCATCTAGGAAGCCCCAGC-TCTGTATGAAAGGAAAA i calJac3.chrUn_GL286444 I 1 C 0 s cebCap1.NW_016107703v1 503372 110 - 2125214 TTCTTCCTTTTGTTACTTTCATAATGAAATAAGaaatgtattttaaataacatttaaatttaattttTTCATTATCATCTGGGAAGCCCCAGC-TCTGTATGAAAGGAAAA i cebCap1.NW_016107703v1 I 24 C 0 s otoGar3.GL873611 2234270 103 - 8137123 ---TTTCTTCTGTTGCTTTCATAATGAAAGAAGaaatatattttaaataaaattta-----GCTTTTTTCATTACTATCTGGGAAGCCCCAGCATCTCTGTGAAAAAAAAA i otoGar3.GL873611 C 0 I 328 e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=249332.000000 s hg38.chr7_KI270899v1_alt 130429 47 + 190869 CAATGTCCACTTTAGAGT-TAAACTtgctgatggaaaaaccagactcc s panTro5.chr7_NW_015973503v1_random 8693 46 + 11459 CAATGTCCACTTTAGAGT-AAAACTtgctgatggaaaa-ccagactcg i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 91517 37 - 432965 CGATGTCCACTTTAGAGT-AAAACTTGCTGACGGAAca---------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 150605 48 + 85365473 CAATGTGCACTTTAGAGTAAAAACTtgctgatggaaaaaccagactct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33997965 48 + 185818997 CAACGTCCACTTTACGGTAAAAACTtgctgatggaaaaagcgaactct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33613928 48 + 192294377 CAACGTCCACTTTACGGTAAAAACTtgctgatggaaaaagcgaactct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4380624 48 - 9440265 CAACGTCCACTTTACAGTAAAAACTtgctgatggaaaaagcgaactct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16969023 48 - 21915920 CAACGTCCACTTTACAGTAAAAACTtgctgatggaaaaagcaaactct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104880 48 - 21531802 CAACGTCCACTTTACAGTAAAAACTtgctgatggaaaaagcaaactcc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 129149 48 - 2515279 CAACGTCCACTTTACAGTAAAAACTtgctgatggaaaaagcgaactct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 294957 48 + 6586416 CAACGTCCACTTTACAGTAAAAACTtgctgatggaaaaagcaaattcc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 23765 48 + 138751 CAATGCCCACTTTAGAGTAAAAACTtgctgatggaaaaaccaaactcc i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 503482 43 - 2125214 CAATGTCCACTT-----TAAAAACTtgctgatggaaaaaccaaactcc i cebCap1.NW_016107703v1 C 0 I 417 e otoGar3.GL873611 2234373 328 - 8137123 I e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1464293.000000 s hg38.chr7_KI270899v1_alt 130476 360 + 190869 gtagaatattttaaagaggttatttctgagccaacaggggcaaccacagcctgggagacaggctccaaggagtcctgagaaaggacctgaggtcgggttgcagtttt---------tttttaatttttt-gagatggagtctcgctgtgtc-a-ccaggctggagtgcagtggcgcgatctcggctcactgcaacctccgcctcccgggttcaagagattctcctgcctcagtctcccgagtagctgggactacaggtgcccgccaccacgcccggctaa-tttttgtatttttagtagagacagggtttcaccgtgttggccaggatggtctcgatctcttgacctg--gtgatccacctgcctcggcctccca-------------------------------------------- s panTro5.chr7_NW_015973503v1_random 8739 355 + 11459 tcagaatattttaaagaggttatttctgagccaacaggggtaaccacagcctgggagacaggctccaaggagtcctgagaaaggacctgaggtcgg-ttgcagtttt---------tttttaatttttttgagatggagtctcgctgtgtc-a-ccaggctg-agtgcagtggcgcgatctcggctcactgcaacctccgc-tcccgggttcaagagattctcctgcctcagtctcccgagtagctgggactaagcgcgcccgccacaccgcccg-ctaa-tttttgtatttttagtagagacagggtttcaccgtgttggccaggatggtctcgatctcttgacctg--gtgatccacctgcctcg--ctccca-------------------------------------------- i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 91554 353 - 432965 --------ttttaaagaggttatttccgagccaacaggggcaaccacagcctgggagacaggctccaaggagtcccgagaagggacctgaggtcgggttgcagttct---------tttttaatttttt-gagatggagtctcgctctgtc-gcccaggctggggtgctgtggcgcgatcttggctcactgcaagctccgcctcccgggttcaagcaattctcctgcctcagtctcccgagtagctgggaccacaggcgcccgccgccacgcccggctaa-tttttgtatttttagtagagacagggtttcaccgtgttggccaggatggtctcgatctcttgacctg--gtgatccacctgcctcggcctccca-------------------------------------------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 150653 370 + 85365473 gtagaatattttaaagaggttatttctgagccaatagggggaaccacagtctgggagacagggtccaaggagtcctgagaaaggaactgaggtcgggttgcagttttttgtttttgtttttgttttttttgagatggagtctcgctgtgtc-a-ccaggctggagtgcagtggcgcgatctcggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccacgcccggctaa-tttttgtatttttagtagagacggggtttcaccgtgttggccaggatggtctcgatctcttgacctc--gtgatccgcctgcctcggcctccca-------------------------------------------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33998013 321 + 185818997 gtaaaatattttaaagaggttatttctgagccaatagcagcgaccacagcctgggagacaggctccaagggatcc-----------------------------------------------atttttt-gagacagagtctcgccctgtc-c-ccaggctggagtg-agcagcgccatctcggctcactgcaacctctgcctcccgggttcacaccattctcctgcctcagcctcccaagtagctgggaccacaggcg-ccgccaccatgcccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctt--gtgatccacctgcctcggcctcccg-------------------------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33613976 321 + 192294377 gtaaaatattttaaagaggttatttctgagccaatagcagcgaccacagcctgggagacaggctccaagggatcc-----------------------------------------------atttttt-gagacagagtctcgccctgtc-c-ccaggctggagtg-agcagcgccatctcggctcactgcaacctctgcctcccgggttcacaccattctcctgcctcagcctcccaagtagctgggaccacaggcg-ccgccaccatgcccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctt--gtgatccacctgcctcggcctcccg-------------------------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4380672 321 - 9440265 gtaaaatattttaaagaggttatttctgagccaatagcagcgaccacagcctgggagacaggctccaagggatcc-----------------------------------------------atttttt-gagacagagtctcgccctgtc-c-ccaggctggagtg-agcagcgccatctcggctcactgcaacctctgcctcccgggttcacaccattctcctgcctcagcctcccaagtagctgggaccacaggcg-ccgccaccatgcccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctt--gtgatccacctgcctcggcctccca-------------------------------------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16969071 321 - 21915920 gtaaaatattttaaagaggttatttctgagccaatagcagcgaccacagcctgggagacaggctccaagggatcc-----------------------------------------------atttttt-gagacagagtctcgccctgtc-c-ccaggctggagtg-agcagcgccatctcggctcactgcaacctctgcctcccgggttcacaccattctcctgcctcagcctcccaagtagctgggaccacaggcg-ccgccaccatgcccggctaattttttgtatttttagtagagacggggtttcaccacgttagccagaatggtctcgatctcctgacctt--gtgatccacctgcctcggcctcccg-------------------------------------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 104928 322 - 21531802 gtaaaatgttttgaagaggttatttctgagccaatagcagcca-cacagcctgggagacagggtccaagggatcc-----------------------------------------------atttttt-gagacagagtctcaccctgtc-c-ccaggctggagtgtggtagccggatctcagctcactgcaacctctgcctcccaggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccgcgcccggctaattttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatccacccacctcagcctcccg-------------------------------------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 129197 320 - 2515279 gtaaaatattttaaagaggttatttctgagccaatagcagtgaccacagcctgggagacaggctccaagggatcc-----------------------------------------------atttttt-gagacagagtctcgccctgtc-c-ccaggctggagtg-agcagcgccatctcggctcactgcaacctctgcctcccgggttcacaccattctcctgcctcagcctcccaagtagctgggaccacaggcg-ccgccaccatgcccggctaattttttgtatttttagtagagac-gggtttcaccatgttagccaggatggtctcgatctcctgacctt--gtgatccactcgcctcggcctcccg-------------------------------------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 295005 323 + 6586416 gtaaaatgttttgaagaggttatttctgagccaatagcagccaccacagcctgggagagagggtccaagggatcc-----------------------------------------------atttttt-gagacggagtctcgctctgtcgc-ccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccgggttcaagtcattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacgtctggctaattttttgtatttttagtagagacggggtttcatcgttttagccaggatggtctcgatctcctgagctc--atgatccacccgcctcggcctcccg-------------------------------------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 23813 319 + 138751 gtaaaattctttttttattttgttttttg---------------------------------------------------------------------------------------------ttttttt-gagatggagtctcactctgtctc-ccaggctggagtacagtggcgtgatcttggctcactgcaacctccgcctgctgggttccagcaattct----cctcagactcctcagtagctgagattacaggcatgcgccaccatgcctggctaa-tttttgtatttttagtaaaaagggagtttcaccatgttggccaggctggtctcaaactcctgaccttaggtgatctgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccctgcccagccttcca i calJac3.chrUn_GL286444 C 0 I 91 e otoGar3.GL873611 2234373 328 - 8137123 I e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 503525 417 - 2125214 I a score=123776.000000 s hg38.chr7_KI270899v1_alt 130836 31 + 190869 aagtgctgggattacaggcgtgagtcaccgc s panTro5.chr7_NW_015973503v1_random 9094 30 + 11459 aagtgctgggatgagaggcgtgagtcac-gc i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 91907 30 - 432965 aagtgct-ggatgacaggcatgagccaccgc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 151023 31 + 85365473 aagtgctggcatgacaggtgtgagccagcgc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33998334 31 + 185818997 aagtgctgggatgaggggtgtgagccgctgc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33614297 31 + 192294377 aagtgctgggatgaggggtgtgagccgctgc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4380993 31 - 9440265 aagtgctgggatgaggggtgtgagccgctgc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16969392 31 - 21915920 aagtgctgggatgaggggtgtgagccgctgc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 105250 31 - 21531802 aagtgctgggatgaggggagtgagccgccgc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 129517 31 - 2515279 aagtgctgggatgaggggtgtgagccgctgc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 295328 31 + 6586416 aagtgctgggatgaggggtgtgagccgccgc i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2234373 328 - 8137123 I e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 503525 417 - 2125214 I e calJac3.chrUn_GL286444 24132 91 + 138751 I a score=30184.000000 s hg38.chr7_KI270899v1_alt 130867 7 + 190869 gcccggc s panTro5.chr7_NW_015973503v1_random 9124 6 + 11459 gcccg-c i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 91937 7 - 432965 gcccggc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 151054 7 + 85365473 gcccggc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33998365 7 + 185818997 gctcggc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33614328 7 + 192294377 gctcggc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4381024 7 - 9440265 gctcggc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16969423 7 - 21915920 gcttggc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 105281 7 - 21531802 gcccggc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 129548 7 - 2515279 gctcggc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 295359 7 + 6586416 gcccggc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 24223 7 + 138751 gtctggt i calJac3.chrUn_GL286444 I 91 C 0 e otoGar3.GL873611 2234373 328 - 8137123 I e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 503525 417 - 2125214 I a score=2602060.000000 s hg38.chr7_KI270899v1_alt 130874 466 + 190869 cgcagtttggttttaacatttcagggaggcaggag-ttacaggcaaagacatacagccgtgcac--agaaggtcggcattggtttgacctgaaagggagggacatctcagagc-tggggcttacaggacatcggtggattcagagattctttaatttgcatttggttggaggaggaaggttctgtctaaaatttggaagctgtgtagcaaga-tgatgacctgcaggtgtgactttaccc-ttgcct-gcatgggtcctgtttataatttggtatcttattgccacaaagagtctg-tctgtcagtcctaagatctccatg-acctctaatgctggtccgtggttgcatctaagctgcaaaagggaaggagtataatgaagcgtggcgggcctcccttcccatcgaggctgggaactcagcttttcaggtttctctggggcccctttcagttgtttagggggcttagggttt--tgt s panTro5.chr7_NW_015973503v1_random 9130 460 + 11459 cgcactttggttttaacatt-cagggaggcaggag-ttacag-caaaggcatacagccgtgcaacaagaaggtcggcattggtttgagctgaaagggagggacatctcaaagc-tggggcttacaggacatcggtg-attcagagattctttaatttgcgtttggttggaggaggaaggttctgtctaaa-cttggaagctgtgtagcaaga-tgatgacctgcaggtgtgactttaccccttgcct-gcatgggtcctgtttataatttggtgtcttattgccaca--gagtctg-tctgtcagtcttaagatctccatggacctctaatgctggtccatggttgcatctaagctgcaaaagggaaggagcgtaatgaagcgtggcggact--ccttcccatcgaggc-gggaa-tcagcttttcaggtttctctggggcccctttcagttgtttagggggcttagggttt--tgt i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 91944 465 - 432965 cgcagtttggttttaacatttcagggaggcaggag-ttacaggcaaagacatacagccgtgcac--agaaggtcggcattggtttgacctgaaagggagggacatctcaaagt-cagggcttacaggacatcggtggattcagagattctttaatttgcatttggttggaggaggaaggttctgtctaaaacttggaagctgtgtagcaaga-tgatgacctgcaggtgtgactttaccc-ttgcct-gcatgggtcctgtttataatttggtatcttattgccacaaagagtctg-tctgtcagtcttaagatctccatg-acctctaatgctggtccgtggttgcatctaagctgcaaaagggaaggagtgtcacgaagcgtggcggacct-cccttccatcgaggctgggaactcagcttttcaggtttctctggggcccctttcagttgtttagggggcttagggttt--ttt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 151061 465 + 85365473 agcagtttggttttaacattgcagggaggcaggag-ttacaggcaaagacacacagccgtgcac--agaaggtcggcattggtttgacctgaaagggcgtgacatctcaaagc-cggggctcacgggatgtcggtggattcagagattctttaatttgcatttggttggaggaggaaggttctgtctaaaacttggaagctgtgtagcaaga-tgatgacctgcaggtgtgacttaaccc-ttgcct-gcatgggtcctgtttataatttggtatcttattgccacaaagagtcca-tctgtcagtcttaagatctccatg-acctctaatgccggtccgtagttgcatctaaactgcaaaacagaaggagtataatgaagactggcggacctcccttcccatcgaggctgggaactcagcttttcaggtttctctggggccgctttcagtcgtttagggggcttaggattt--tg- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33998372 452 + 185818997 cgcagtttggttttaacatttcagggaggcaagag-tcacaggcaaagacctacagcaaggctc--agaaggtcgacgttggtttgacctgaaagggccggacatctcaaaga--ggggcttccagg----------attcagagattcttcaatttgcatttggtt---ggaggaaggttctgtctaacacttggatgctgggtagcaagactgatgacctgcagctgtgacttaaccc-ttgcct-gcatgaatcctgtttctaatttggtgtcttattgcgacaaagggtcca-tctgtcaggctcaagatctccgtg-aactttaacgctggtccatggctgcatctaaactacaaaagggaaggggtgtaacgaagcctggcggacctcccttcccatcaaggctgggaactcagcttttcaggcttctctgggacccctttcggttgttta-agggcttagggttt--tgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33614335 451 + 192294377 cgcagtttggttttaacatttcagggaggcaagag-tcacaggcaaagacctacagcaaggctc--agaaggtcgacgttggtttgacctgaaagggccggacatctcaaaga--ggggcttccagg----------attcagagattcttcaatttgcatttggtt---ggaggaaggttctgtctaaCACTTGGATGCTGGGTAGCAAGACTGATGACCTGCAGCTgtgacttaaccc-ttgcct-gcatgaatcctgtttctaatttggtgtcttattgcgacaaagggtccg-tct-tcaggctcaagatctccgtg-aactttaacgctggtccgtggctgcatctaaactacaaaagggaaggggtgtaacgaaccctggcggacctcccttcccattaaggctgggaactcagcttttcaggcttctctgggacccctttCGGTTGTTTA-AGGGCTTAGGGTTT--TGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4381031 452 - 9440265 cgcagtttggttttaacatttcagggaggcaagag-tcacaggcaaagacctacagcaaggctc--agaaggtcgacgttggtttgacctgaaagggccggacatctcaaaga--ggggcttccagg----------attcagagattcttcaatttgcatttggtt---ggaggaaggttctgtctaacacttggatgctgggtagcaagactgatgacctgcagctgtgacttaaccc-ttgcct-gcatgaatcctgtttctaatttggtgtcttattgcgacaaagggtcca-tctgtcaggctcaagatctccgtg-aactttaacgctggtccgtggctgcatctaaactacaaaagggaaggggtgtaacgaagcctggcagacctcccttcccatcaaggctgggaactcagcttttcaggcttctctgggacccctttcggttgttta-agggcttagggttt--tgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16969430 452 - 21915920 cgcagtttggttttaacatttcagggaggcaagag-tcacaggcaaagacctacagcaaggctc--agaaggtcgacgttggtttgacctgagagggccggacatctcaaaga--ggggcttccagg----------attcagagattcttcaatttgcatttggtt---ggaggaaggttctgtctaacacttggatgctgggtagcaagactgatgacctgcagctgtgacttaaccc-ttgcct-gcatgaatcctgtttctaatttggtgtcttattgcgacaaagggtcca-tctgtcaggctcaagatctctgtg-aactttaacgctggtccgtggctgcatctaaactacaaaagggaaggggtgtaacgaagcctggcggacctcccttcccatcaaggctgggaactcagcttttcaggcttctctgggacccctttcggttgttta-agggcttagggttt--tgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 105288 453 - 21531802 cgcagtttggttttaacatttcagggaggcaagag-ttacaggcaaagacctacagcaaggctc--agaaggtcaacgttggtttgacctgaaagggctggacatctcaaaga-gggggcttacagg----------attcagagattctttaatttgcatttggtt---ggaggaaggttctgcctaaCACTTGGATTCTGGGTAGCAAGACTGATGACCTGCAGCTgtgacttaaccc-ttgcct-gcatgaatcctgtttctaatttggtgtcttattgccacaaagggtccg-tctgtcagcctcaagatctctgtg-aactttaacgctggtccgtggctgcatctaaactacaaaaaggaaggggtgtgatgaagcctggcggacctcccttcccatcaaggctgggaactcagcttttcaggcttctctgggacccctttcggtcgttta-ggggcttaggattt--tgt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 129555 452 - 2515279 cgcagtttggttttaacatttcagggaggcaagag-tcacaggcaaagacctacagcaaggctc--agaaggtcgacgttggtttgaactgagagggccggacatctcaaaga--ggggcttccagg----------attcagagattcttcaatttgcatttggtt---ggaggaaggttctgtctaacacttggatgctgggtagcaagactgatgacctgcagctgtgacttaaccc-ttgcct-gcatgaatcctgtttctaatttggtgtcttattgcgacaaagggtcca-tctgtcaggctcaagatctctgtg-aactttaactctggtccgtggctgcatctaaactacaaaagggaaggggtgtaacgaagcctggcggacctcccttcccatcaaggctgggaactcagcttttcaggcttctctgggacccctttCGGTTGTTTA-AGAGCTTAGGGTTT--TGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 295366 451 + 6586416 cgcagtttggttttaacatttcagggaggcaagag-taacaggcaaagacatacagcagggctc--agaaggtcaacgttggtttgacctgaaagggcgggacgtgtcaaaga-gggggcttccag------------ttcagagattctttaatttgcgtttggtt---ggaggaaggttctgtctaaaacttggatgctgggtagcaagactgatgacctgcaggtgtgacttaaccc-ttgcct-gcatgaatcctgtgtctaatgtggtgtcttattgccacaaagggtccg-tctgtcagcctcaagatctctatg-aactttaacgctggtccgtggctgcatctaaactacaaaagggaaggggtgtaaggaagcctggcggacctcccttcccatcaaggctgggaacgcagctttttaggcttctctgggacccctttcggttattta-ggggcttaggattt--tgt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 24230 470 + 138751 tgcagtttggttttcctatttcagggaggcaggagtttagaggcaaagacatacagcaatgtat--gaaaggtgggtattggttaggcctgaaaaggcgggacatctcaaagcaggggacttagaggacataggtggattcagagattc---aatttgcatttggttggaacaggaaggttctatctaaaACTTCAATGCTGTGTAGAAAGATTGATGACCTGCAGgtatgacttaaccc-ttgcctggcatgggtcctgtttataatttggtatcttattgccacaaagagcccgttctggcagtcttaagatctctatg-aactttaatgctggtctgtggttccatctaaactgcaaaaagactggcgtataatgaagcctggctgacctcccttcccatcaaggctgggaattcggcttttcaggtttctctggggcccctttcagtcatttagggggcttaggattttatgt i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 503942 473 - 2125214 cgcagtttggttttcatatttcagggaggcaggaatttacaggcaaagacatacagcaatgcgt--ggaaggtgggcattggttaggcctgaaaacgcgggacatctcaaagagggggacttagaggacataggtggattcagagattctttaatttgcatttggttggaggaggaaggttctatctaaaacttcaatgctgtgtagaaagattgatgacctgcaggtgtgacttaaccc-ttgcctggcatgggtcctggttataatttggtatcttattgccacaaagagtccgttctggccgtcttaagatctctatg-aactttaatgctggtctgtggttccatctaaactgcaaaagggcagtgatataatgaagcctggctgacctcccttcccatcaaagctgggaattcggcctttcaggtttctctggggcccctttcagtcgtttagggggcttaggattttatgt i cebCap1.NW_016107703v1 I 417 C 0 e otoGar3.GL873611 2234373 328 - 8137123 I e canFam3.chr6 61026749 1212 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=67621.000000 s hg38.chr7_KI270899v1_alt 131340 10 + 190869 ttagcttacC s panTro5.chr7_NW_015973503v1_random 9590 10 + 11459 ttagcttacC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 92409 10 - 432965 ttagcttacC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 151526 10 + 85365473 ttagcttacC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33998824 10 + 185818997 ttagcttacC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33614786 10 + 192294377 TTAGCTTACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4381483 10 - 9440265 ttagcttacC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16969882 10 - 21915920 ttAGCTTACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 105741 10 - 21531802 ttagcttacC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130007 10 - 2515279 TTAGCTTACC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 295817 10 + 6586416 ttagcttacC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 24700 10 + 138751 ttagcttcca i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 504415 10 - 2125214 ttagcttaca i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61027961 10 - 77573801 TTAGAATAAG i canFam3.chr6 I 1212 C 0 e otoGar3.GL873611 2234373 328 - 8137123 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=632008.000000 s hg38.chr7_KI270899v1_alt 131350 86 + 190869 AACTTTTCCTATTAGAAATTTAGCTGAAGTTGAGGTCACATAAGTCTTCTGGAGCATTCCCTA--AC--ACAGAAAATGCCCCGCCCTTT s panTro5.chr7_NW_015973503v1_random 9600 84 + 11459 AACTTTTCCTATTA-AAATTTAGCTGAAGTTGAGGTCACATAAGTCTTCTGGAGCATTCCCTA--AC--ACAGAAAAT-CGCCGCCCTTT i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 92419 86 - 432965 AACTTTTCCTATTAGAAATTTAGCTGAAGTTGAGGTCACATAAGTCTTCTGGAGCATTCCCTA--AC--ACAGAAAATGCCCTGCCCTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 151536 88 + 85365473 AACTTTTCCTATTAGAAATTCAGCTGAAGTTGAGGTCCCATAAGTCTTCTGGAACATTCCCTAATAT--ACAGAAAATGCCCCGCCCTTT i nomLeu3.chr20 C 0 I 340 s rheMac8.chr3 33998834 88 + 185818997 AACTTTCCCTATTAGAAATTTAGCTGAAGTTAAGGTCACACAAATCTTCTGGAGCTTTCCCTA--ACTTACAGAAAATGCCCCGCCCTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33614796 88 + 192294377 AACTTTCCCTATTAGAAATTTAGCTGAAGTTAAGGTCACACAAATCTTCTGGAGCTTTCCCTA--ACTTACAGAAAATGCCCCGCCCTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4381493 88 - 9440265 AACTTTCCCTATTAGAAATTTAGCTGAAGTTAAGGTCACACAAATCTTCTGGAGCTTTCCCTA--ACTTACAGAAAATGCCCCGCCCTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16969892 88 - 21915920 AACTTTCCCTATTAGAAATTTAGCTGAAGTTAAGGTCACACAAATCTTCTGGAGCTTTCCCTA--ACTTACAGAAAATGCCCCGCCCTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 105751 88 - 21531802 AACTTTCCCTATTAGAAATTTAGCTGAAGTTAAGGTCACACAAATCTTCTGGAGCTTTCCCTA--ACTTACAGAAAATGCCCTGCCCTTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130017 88 - 2515279 AACTTTCCCTATTAGAAATTTAGCTGAAGTTAAGGTCACACAAATCTTCTGGAGCTTTCCCTA--ACTTACAGAAAATGCCCCGCCCTTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 295827 88 + 6586416 AACTTTCCCTATTAGAAATTTAGCTGAAGTTAGGGTCACACAAATCTTCCGGCGCTTTCCCTA--ACTTACAGAAAAGGCCCCACCCTTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 24710 88 + 138751 AACTTTTCCTATTGGAAATTCAGCTGGAGTTGAGGTCACATAAATCTTCTGGAGCATTCCCTA--ACGTGCAGAAAATGTCCCACCCTTT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 504425 86 - 2125214 AACTTTTCCTATTGGAAATTCAGCTGGAGTTGAGGTCAC--AAATCTTGTGGGGCATTCCCTA--ACATGCAGAAAATGTCCCGCCCTTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2234701 88 - 8137123 aaCTTTTCCAATTAGAAATTTAACTGAGATTAAGGTCACATAAATACTCTTGAGAGTTGCCTA--AAATACAAAGAGTGTCCAGTTCTTT i otoGar3.GL873611 I 328 C 0 s canFam3.chr6 61027971 83 - 77573801 AACTTTTCCAATTAGAAAT----CTGAAGTTGAGG-CATATATGTGTCCTGGAGAGCTGCCTA--AAATATAGAAAACGTCCCATCTTTT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1531858.000000 s hg38.chr7_KI270899v1_alt 131436 247 + 190869 AGAATTCTAACAGGACAGA-GAAAGTGGAGGCGAGGAGCCCACCCTCTCCAACTCC---------------TGCTCTTACCGGGGCCCC--AAGA-CCCAGAGGAGGGGCCT-------------------GCCTGGGC------CCTGGGGAGG-GCACCC--AG--------CCTGTGCTCCCTGGAAGG-------------GTGGGTTACTC--------CAGGCAGGCCACTCCTGCTGGC-A-TGGCGAT----------------------------------------------------GATTCAGTTTCAGCCCTGCACCTGC---------------AGCC-TCTGGTTGCAGCCGGTCTGCAGTGTT----------------------------TCTCTTTGTT-CCCC s panTro5.chr7_NW_015973503v1_random 9684 242 + 11459 AGAATTCTAACAGGACAGA-GAAAGTGGAG-CGAGGAGCCCACCCTCTC-AACTCC---------------TGCTCTTACGGGG--CCC--AAGA-CCCAGAGGAGGGGCCT-------------------GCCTGGGC------CCTGGGGAGG-GCACCC--AG--------CCTGTGCTCCCTGGAAGG--------------TGGGTTACTC--------GAGGCAGGCCACTCCTGCTGGCGA-TGGCGAT----------------------------------------------------GATTCAGTTTCAGCC-TGCACCTGC---------------AGCC-TCTGGCTGCAGCCGGTCTGCAGTGTT----------------------------TCTCTTTGTT-CCCC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 92505 244 - 432965 AAAATTCTAACAGGACAGA-GAAAGTGGAGGCAAGGAGCCCACCCTCTCCAACTCC---------------TGCTCTTACGGGGGCCCC--AAGA-CCCAGAGGAGGGGCCT-------------------GCCTGGGC------CCTGGGGAGG-GCACCC--AG--------CCTGTGCT-CCTGGAAGG-------------GTGGGTTACTC--------CA-GCAGGCCACTCCTGCTGGC-A-TGGCGAT----------------------------------------------------GATTCAGTTTCAGCCCTGCACCTGC---------------AGCC-TCTGGCTGCAGCCGGTCTGCAGTGTT----------------------------TCTCTTTGTT--CCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 151964 248 + 85365473 agaaTTTGAACAGGACAGA-GAAAGCGGAGGTGAGGAGCCCACCCTCTCCAACTCC---------------TGCTCTTACAGGGGCCCC--AGGACCCCAGAGGAGGGGCCT-------------------GCCTGGGC------CCTGGGGAGG-GCACCC--AG--------CCTGTGCTCCCTGGAAGG-------------GTGGGTTACTC--------CAGGCAGGCCACTCCTGTTGGC-A-TGGCGAT----------------------------------------------------GATTCCATTTCAGCCCTGCACCTGC---------------AGCC-TCTGGCTGCAGCCGGTCTGCAGCATT----------------------------TCTCTTTGTT-CCCC i nomLeu3.chr20 I 340 C 0 s rheMac8.chr3 33998922 247 + 185818997 AGAA-TCTAACAGGACAGA-GAAAGCAGAGGCGAGGAGCCCACCCTCTCCAACTCC---------------TACTCTTACCGGGGCCCC--AGGACCCCAGAGGAGGGGCCT-------------------GCCTGGG-------CCTGGAGAGG-GCACCC--AG--------CCTGTGCTCCTTGGAAGG-------------GTGGGTAACTC--------CAGGCAGGCCCCTCCTGTTGGC-A-TGGCGGT----------------------------------------------------GATTCAATTTCAGTCCTGCACCTGC---------------AGCC-TCCGGCTGCAGCTGATTCGCAGGGTT----------------------------TCTCTTAGTTCCCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33614884 246 + 192294377 AGAA-TCTAACAGGACAGA-GAAAGCAGAGGCGAGGAGCCCACCCTCTCCAACTCC---------------TACTCTTACCGGGGCCCC--AGGACCCCAGAGGAGGGGCCT-------------------GCCTGGG-------CCTGGAGAGG-GCACCC--AG--------CCTGTGCTCCCTGGAAGG-------------GTGGGTAACTC--------CAGGCAGGCCCCTCCTGTTGGC-A-TGGCGGT----------------------------------------------------GATTCAATTTCAGTCCTGCACCTGC---------------AGCC-TCCGGCTGCAGCTGATTTGCAGGGTT----------------------------TCTCTTTGTT-CCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4381581 246 - 9440265 AGAA-TCTAACAGGACAGA-GAAAGCAGAGGCGAGGAGCCCACCCTCTCCAACTCC---------------TGCTCTTACCGGGGCCCC--AGGACCCCAGAGGAGGGGCCT-------------------GCCTGGG-------CCTGGAGAGG-GCACCC--AG--------CCTGTGCTCCCTGGAAGA-------------GTGGGTAACTC--------CAGGCAGGCCCCTCCTGTTGGC-A-TGGCGGT----------------------------------------------------GATTCAATTTCAGTCCTGCACCTGC---------------AGCC-TCTGGCTGCAGCTGATTTGCAGGGTT----------------------------TCTCTTTGTT-CCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16969980 246 - 21915920 AGAA-TCTAACAGGACAGA-GAAAGCAGAGGCGAGGAGCCCACCCTCTCCAACTCC---------------TGCTCTTACCGGGGCCCC--AGGACCCCAGAGGAGGGGTCT-------------------GCCTGGG-------CCTGGAGAGG-GCACCC--AG--------CCTGTGCTCCCTGGAAGG-------------GTGGGTAACTC--------CAGGCAGGCCCCTCCTGTTGGC-A-TGGTGGT----------------------------------------------------GATTCAATTTCAGTCctgcacctgc---------------agcc-tctggctgcagctgatctgcagGGTT----------------------------TCTCTTTGTT-CCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 105839 222 - 21531802 AGAA-TCTAACAGGACAGA-GAAAGCAGAGGCGAGGAGCCCACCCTTTCCAACTCC---------------TGCTCTTACTGGGGCCCC--AGGACCCCAGAGGAGGGGCCT-------------------GCCTGGG-------CCTGGAGAGG-GCACCC--AG--------CCTGTGCTCCCTGGAAGG-------------GTGGGTAACTC--------CAGGCAGGCCCCTCCTGTTGGC-A-TGGCAGT----------------------------------------------------GATTCAATTTCAGCCCCACACCTGC---------------AGCC-TCTGG----------------------------------------------------CTTTGTT-CCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130105 246 - 2515279 AGAA-TCTAACAGGACAGA-GAAAGCAGAGGCGAGGAGCCCACCCTCTCCAACTCC---------------TGCTCTTACCGGGGCCCC--AGGACCCCAGAGGAGGGGTCT-------------------GCCAGGG-------CCTGGAGAGG-GCACCC--AG--------CCTGTGCTCCCTGGAAGG-------------GTGGGTAACTC--------CAGGCAGGCCCCTCCTGTTGGC-A-TGGCGGT----------------------------------------------------GATTCAATTTCAGTCctgcacctgc---------------agcc-tctggctgcagctgatctgcagGGTT----------------------------TCTCTTTGTT-CCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 295915 247 + 6586416 AGAA-TCTAACAGGACAGA-GAAAACAGAGGCGAGGAGCCCACCCTCTCCAACTCC---------------TGCTCTTACCGGGGCCCC--AGGACCCCAGGGGAGGGGCCT-------------------GCCTGGG-------CCTGGAGAGG-GCACCC--AG--------CCTGTGCTCTCTGGAAGA-------------GTGGGTTACTC--------CAGGCAGGCCCCTCCTGTTGGC-A-TGGCGGT----------------------------------------------------GGTTCAATTTCAGCCCTGCACCTGC---------------ACCTGTCTGGCTGCAGCCGGTCTGCAGGGTT----------------------------TCTCTTTGTT-CCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 24798 263 + 138751 AGAATTC-AGAGGAACAGAGGAAAGTGGAGGCGAGGAGCCCACACTCTCCAACTCCAGGCTCCAGGCTTCAGGCTCTTACCCAGGCTCC--AGGACTCCAGAGGAGGGGCCT-------------------GCCTTGGC------CCTGGGGAAA-GCACCC--AG--------CCTGTGCTCCCTAGAAGG-------------GTGGGTTACTC--------CAGGCAGGCTACTCCTGTTGGC-A-TGGCAAT----------------------------------------------------GACTCGATTTCAGCCCTGCACCTGC---------------AGCC-TCTGGCTGCAGCCAGTCTGCAGGGTT----------------------------TCTCTCTGTT-CTCC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 504511 248 - 2125214 AGAATTCTAACAGGGCAGA-GAAAGTGGAGGTGAGAAGCCCACCCTCTCCAACTCC---------------TGCTCTTACCCGGGCCCC--AGGACCCCAGAGGAGTGGCCT-------------------GCCTCGGC------CCTGGGGAAA-GGACCC--AG--------CCTGTGCTCCATGGAAGG-------------GTGGGTTACTC--------CGGGCAGGCTACCCCTGTTGGC-A-AGGCGAT----------------------------------------------------GACTCAATTTCAGCCCTGTACCTGT---------------GGCC-TCTGGCTGCAGCTAGTCTGCAGGGTT----------------------------TCTCTCTGTT-CCCC i cebCap1.NW_016107703v1 C 0 I 48 s otoGar3.GL873611 2234789 347 - 8137123 AGAATTCTGGCACAGCAAA-GAAAACAAAGGTTTGAAACCCACCCTCTCCAACTCC---------------TCCTTTTCCCAGGGGCCCTGAGGACCCTAGAAGAGGAGCCCAGAGGACTCTAGAAGAGGGGCCTGGGTGGAG-GCTTGGGCAGGTGCACCCCAGA--------GCTATGGTCCCTGGGAGGGTAGCTGTCCTCTGTGGACAACGCAGCCCAAGCAGGCAGGCACCACCTTTAGCA-G-TGGCAGTGAGAGTGCTAAATAGAAATGTGGAAATGTTATAAGGACTTGTTTATTCAAAAGACACAGTTTCAGCTTTGCACCTGCTCCAATCA-------GACC-TCTGA-----------TTGCAGGATT----------------------------TCCCCCTCCC-CTCT i otoGar3.GL873611 C 0 I 12 s canFam3.chr6 61028054 337 - 77573801 AGAATTCTAACATGGCAGA-GGATGCAGAGGGAAGAAACCTACCGTCAC-----CC---------------TCCTTTCACAATGGTGAT--CAGTGCCCAGGAGGGGAGCCT-------------------GCCTGGCCCAAGCTCTCTAGCAGC-ACACCC--AGGGCCAGGACATGGGCCTCCTTGCTGG-------------GCAGGGAGTTG-------------------CCACTGTCAGC-AGTGGTGAT----GTTATGAATACAAATGTGAAAATGCTATTAAACACTGCTTATCTGCA-GAGACATTTTCACCCTTGTACCTGCTCCAATCAGACATGTGGCC-TCTAACTGCAGCCGGTCTGCAGAGATACCACAGAAGCAAATGTGTGCCATGAGATCCCCTTCTT-CCCC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=153305.000000 s hg38.chr7_KI270899v1_alt 131683 44 + 190869 CTTCCATCTTCCTCCCACCTTATGTTCCCA-TGCTTCC--CAGC-------------------------------AGG s panTro5.chr7_NW_015973503v1_random 9926 42 + 11459 CTTCCATCTTCCTG--ACCTTATGTTCCCA-TGCTTCC--CAGC-------------------------------AGG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 92749 44 - 432965 CTTCCGTCTTCCTCCCACCTTATGTTCCCA-TGCTTCC--CAGC-------------------------------GGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152212 44 + 85365473 CTTCCATCTTCCTCCCACCTTATGTTCCCA-TGCTTCC--CAGT-------------------------------GGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999169 64 + 185818997 CTT--ATCTTCATGCCACCTTTTGTTCCCA-GGCTTCC--CAGTC---------GGGCTCCCAGACCCCCCAAGGGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615130 64 + 192294377 CTT--ATCTTCCTCCCACCTTCTGTTCCCA-GGCCTCC--CAGTG---------GGGCTCCCAGACCCCCCAAGGGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4381827 64 - 9440265 CTT--ATCTTCCTCCCACCTTCTGTTCCCA-GGCCTCC--CAGTG---------GGGCTCCCAGACCCCCCAAGGGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970226 64 - 21915920 CTT--ATCTTCCTCCCACCTTCTGTTCCCA-GGCCTCC--CAGTG---------GGGCTCCCAGACCCCCCAAGGGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 106061 65 - 21531802 CTT--ATCTTCCTCCCACCTTCTGTTCCCAGGGCCTCC--CAGTG---------GGGCTCCCAGGCCTCCCAAGGGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130351 64 - 2515279 CTT--ATCTTCCTCCCACCTTCTGTTCCCA-GGCCTCC--CAGTG---------GGGCTCCCAGACCCCCCAAGGGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296162 64 + 6586416 CTT--ATCTTCCTCCCACCTTCTGTTCCCA-AGCCTCC--CAGTG---------GGGCTCCCAGGCCTCCCAAGGGGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 25061 63 + 138751 ----------CGCTCCATCTTT--TTCACA-TGCTTCC--CAGCGGGGCTCCCAGGGCTCCCAGGCCTCCCAGTGGGG i calJac3.chrUn_GL286444 C 0 C 0 s otoGar3.GL873611 2235148 45 - 8137123 -----------------CTCTAGGTTTCTT----CCCC--CAGTG---------GGTTGCCCAGGCCCTCCAGTGGG- i otoGar3.GL873611 I 12 I 1 s canFam3.chr6 61028391 42 - 77573801 TCTGCATCTGCCTCAGACTTCCC-TTCTCA-TCTTTCCCTCAGA---------------------------------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 504759 48 - 2125214 I a score=90216.000000 s hg38.chr7_KI270899v1_alt 131727 13 + 190869 AGCGGAGGCCCAA- s panTro5.chr7_NW_015973503v1_random 9968 13 + 11459 AGGGGAGGCCCAA- i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 92793 13 - 432965 AGGGGAGGCCCAA- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152256 13 + 85365473 AGCGGAGGCCCAA- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999233 13 + 185818997 AGGGGAGGCCCGA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615194 13 + 192294377 AGGGGAGGCCCGA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4381891 13 - 9440265 AGGGGAGGCCCGA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970290 13 - 21915920 AGGGGAGGCCCGA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 106126 13 - 21531802 AGGGGAGGCCCGA- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130415 13 - 2515279 AGGGGAGGCCCGA- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296226 13 + 6586416 AAGGGAGGCCCGA- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 25124 13 + 138751 AGGGGAGGCCAAA- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 504807 13 - 2125214 AGGGGAGGCCAAA- i cebCap1.NW_016107703v1 I 48 C 0 s otoGar3.GL873611 2235194 13 - 8137123 GGGGGAGACCTGA- i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61028433 13 - 77573801 -AATAAGGCCCCAG i canFam3.chr6 C 0 I 41 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=207323.000000 s hg38.chr7_KI270899v1_alt 131740 38 + 190869 TTTGCGTTTCCTTTTCTGTA-ATAAAGCCTGCTGATGGG s panTro5.chr7_NW_015973503v1_random 9981 38 + 11459 TTTGCGTTTCCTTTTCTGTA-ATAAAGCCTGCTGATGGG i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 92806 38 - 432965 TTTGCGTTTCCTTTTCTGTA-ATAAAGCCTGCTGATGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152269 38 + 85365473 TTTGCGTTTCCTTTTCCGTA-ATAAAGCCTGCTGATGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999246 38 + 185818997 TTTACATTTCGTTTTCTGTG-ATAAAGCCTGTTAATGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615207 38 + 192294377 TTTACATTTCGTTTTCTGTG-ATAAAGCCTGTTAATGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4381904 38 - 9440265 TTTACATTTCGTTTTCTGTG-ATAAAGCCTGTTAATGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970303 37 - 21915920 TTTACATTTCG-TTTCTGTG-ATAAAGCCTGTTAATGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 106139 37 - 21531802 TCTGCATTTCCTTTTCTGTG-ATAAAGCCTGCTAAT-GG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130428 38 - 2515279 TTTACATTTCGTTTTCTGTG-ATAAAGCCTGTTAATGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296239 38 + 6586416 TTTGCATTTCCTTTCCTGTG-ATAAAGCCTGCTAATGGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 25137 32 + 138751 ------TTTCCTTTTATTTA-ATAAAGCCTGCTGATGGG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 504820 32 - 2125214 ------TTTCCTTTCATTCA-ATAAAGCCTTCTGATGGG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2235207 33 - 8137123 TTTGCATTTCCTTTTCCGAGCACAATGCCTG------AA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61028446 41 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1429927.000000 s hg38.chr7_KI270899v1_alt 131778 211 + 190869 TGATTGCAGCTTTCTCTC-------ACTGCCAGGGAGGAACTGGGGTAGGCTCCAGGCAGCCAGAGGCACCACTGTGCTTCCG-TGGG-TTTCCCCGGGGCACCTTCAAGTTCCAGTGTGAGTGCTGTTGAGATTCCG----GGCGTCCAGTGCACACACGGGAGACGG-CCATTGCCTCC-CCTCCAGC----CCCAGCCGCGGTGCACAGGGCGAAGGCTGTCTGGGT s panTro5.chr7_NW_015973503v1_random 10019 211 + 11459 TGATTGCAGCTTTCTCTC-------ACTGCCAGGGAGGAACTGGGGTAGGCTCCAGGCAGCCAGAGGCACCACTGTGCTTCCG-TGGG-TTTCCCCGGGGCACCTTCAAGTTCCAGTGTGAGTGCTGTTGAGATTCCG----GGCGTCCAGTGCACACACGGGAGACGG-CCATTGCCTCC-CCTCCAGC----CCCAGCCGCGGTGCACAGGGCGAAGGCTGTCTGGGT i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 92844 210 - 432965 TGATTGCAGCTTTCTCTC-------ACTGCCAGGGAGGAACTGGGGCAGGCTCCAGGCAGCCAGAGGCACCACTGTGCTTCCA-TGGG-TTTCCCTGGGGCACCTTCAAGTTCCAGTGTGAGTGCTGTTGAGATTCCG----GGCGTCCAGTGCACACACGGGAGACGG-CCATTGCCT-C-CCTCCAGC----CCCAGCCGCGGTGCACAGGGCGAAGGCTGTCTGGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152307 211 + 85365473 TGATTGCAGCTTTCTCTC-------ACTGCCAGGGAGGAATTGGGGCAGGCTCCAGGCAGCCAGAGGCACCACTGTGCTTCCG-TGGG-TTTCCCTGGGGCACCTTCAAGTTCCAGTGTGAGTGCTGTTGAGATTCTA----GGCGTTCAGTGCACGCACGGGAGACGG-CCATTGCCTCC-CCTCCCGC----CCCAGCCGCGGTGCACAGGGCGAAGGCTGTCCGGGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999284 217 + 185818997 TGATTGCAGCTTTCTCTCACTGAGGACTGCCAAGGAGGAACTGGGGCGGGCTCCAGGCAGCCAGAGGCACGACTGTGTTTCCG-TGGG-TTTCCCTGGAAGCCCTCCAAGTTCCAGCGTGAGTGCCGTTGAGAGTCTG----GGCGTCCAGTGCACACAGGGGAGATGG-CCACTGCCTCC-GCTCCAGC----CCCAGCCGTAGTGCACAGGGC-AAGGCTGTCTGGGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615245 217 + 192294377 TGATTGCAGCTTTCTCTCACTGAGGACTGCCAAGGAGGAACTGGGGCGGGTTCCAGGCAGCCAGAGGCACGACTGTGTTTCCG-TGGG-TTTCCCTGGAAGCCCTCCAAGTTCCAGCGTGAGTGCCGTTGAGAGTCTG----GGCGTCCAGTGCACACACGGGAGATGG-CCACTGCCTCC-GCTCCAGC----CCCAGCCGTAGTGCACAGGGC-AAGGCTGTCTGGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4381942 217 - 9440265 TGATTGCAGCTTTCTCTCACTGAGGACTGCCAAGGAGGAACTGGGGCGGGCTCCAGGCAGCCAGAGGCACAACTGTGTTTCCG-TGGG-TTTCCCTGGAAGCCCTCCAAGTTCCAGCGTGAGTGCCGTTGAGAGTCTG----GGCGTCCAGTGCACACACGGGAGATGG-CCACTGCCTCC-GCTCCAGC----CCCAGCCGTAGTGCACAGGGC-AAGGCTGTCTGGGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970340 216 - 21915920 TGATTGCAGCTTTCTCTCACTGAGGACTGCCATGGAGGAACTGGGGCGGGCTCCAGGCAGCCAGAGGCACGACTGTGTTTCCG-TGGG-TTTCCCTGGGAGCCCTCCAAGTTCCAGCGTGAGTGCTGTTGAGAGTCTG----GGCGTCCAGTGCACACACGAGAGACGGCCCACTGC--CC-GCTCCAGC----CCCAGCCGTGGTGCACAGGGCAAAGGCTGTCT-GGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 106176 210 - 21531802 TGATTGCAGCCTTCTCTCACTGAGGACTGCCAGGGAGGAACTGGGGCGGGCTCCAGGCAGCCAGAGGCACGACTGTGTTTCCG-TGGG-TTTCCCTGGGAGCCCTCCAAGTTCCAGTGTGAGTGCTGTTGAGAGTCTG----GGCGTCCAGTGCACAC-------ACGG-CCATTGCCTCC-GCTCCAGC----CCCAGCCGTGGTGCACAGGGC-AAGGCTGTCTGGGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130466 217 - 2515279 TGATTGCAGCTTTCTCTCACTGAGGACTGCCATGGAGGAACTGGGGCGGGCTCCAGGCAGCCAGAGGCACGACTGTGTTTCCG-TGGG-TTTCCCTGGGAGCCCTCCAAGTTCCAGCGTGAGTGCTGTTGAGAGTCTG----GGCGTCCAGTGCACACACGGGAGACGG-CCACTGCCTCC-GCTCCAGC----CCCAGCCGTGGTGCACAGGGC-AAGGCTGTCTGGGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296277 217 + 6586416 TGATTGCAGCTTTATCTCACTGAGGACTGCCAGGGAGGAACTGGGGCAGGCTCCAGGCAGCCAGAGGCAGGACTGTGTTTCCG-TGGG-TTTCCCTGGGAGCCCTCCAAGTTCCAGCGTGAGTGCTGTTGAGATTCTG----GGCGTCCAGTGCACACACAAGAGACGG-CCACTGCCTCC-GCTCCAGC----CCCAGCCGCGGTGCACAGGGC-AAAGCTGTCTGGAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 25169 222 + 138751 TGATTGCAGCTTTCTCTCACTGACAATGGCCAGGGAAGAGCCAGGGCAGGCTTCAGTCAGCCAGAGACACCACTGTGCTTCTG-TGGG-TTTCCCTGGGGCACCTTCAAGTTCCAGTGTGAGTGCCATTGAGATTCTG----GGAGTGCAATGCACATGGAGGAGATAG-CCATTGCCTCC-CCTCCAGCCCCACCCAGCCATGGTGCACAGGGCGAAGCCTGTCCGGGT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 504852 218 - 2125214 TGATTGCAGCTTTCTCTCACTGACGACGACAAAGGAAGAGCCGGGGCAGGCTTCAGGCAGCCAGAGACACCACTGTGCTTCTG-CAGG-TTTCCCTGGGGCACCTTCAAGTTCCAGTGTGAGTGCCATTGAGATTCTG----GGAGTCCAGCGCATGCACTGGAGATAG-CCACTGCCTCC-CCTCCAGC----CCCAGCCAAGGTGCACAGGGCGAAGCCTGTCTGGGT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2235240 200 - 8137123 TGATTACAGCTTTCTCTGCCTTTCTCTTGCT--------------GCTAACTGCAGGCAGCCGGAGGCTCCCCTGTGGCTTTC-TGAATTTTCTCTGGGGAAAGTTCAAATTCAAGTGTGTGTGCCCTTGAGATTCTG-GAAGGAGTCCTGTGCACAC--TAGAGCTGG-TCATTGCCTCCACCTCCAAC----TCTAGATGTGCCACACAAGATGGAAGGTA------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61028487 203 - 77573801 TGATTACAGCTTTCTCTTATTGAAGACTGAAGGGAAGGACCTAGGGCAGGCTTAACTTGGCCAGAGACACTGCTTTGCTTTCACTGGG-GTTCCCTGGTATGCTTTCAAGTTC--ACGTGCGTGGTGTTGA-CTTCTGGGGGGGAGTCTTGTGCACTT----GAGACAG-TCAGTGCCTTG-TCCAAAAG----CCCAAGTGTGATACACAGGGTGA------------- i canFam3.chr6 I 41 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=35629.000000 s hg38.chr7_KI270899v1_alt 131989 6 + 190869 GAAGGC s panTro5.chr7_NW_015973503v1_random 10230 6 + 11459 GAAGGC i panTro5.chr7_NW_015973503v1_random C 0 C 0 s gorGor5.CYUI01015914v1 93054 6 - 432965 GAAGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152518 6 + 85365473 GAAGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999501 6 + 185818997 GAAGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615462 6 + 192294377 GAAGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382159 6 - 9440265 GAAGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970556 6 - 21915920 GAAGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 106386 6 - 21531802 GGAGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130683 6 - 2515279 GAAGGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296494 6 + 6586416 GAAGAC i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 505070 6 - 2125214 GAAGGC i cebCap1.NW_016107703v1 C 0 I 79 e otoGar3.GL873611 2235440 0 - 8137123 C e canFam3.chr6 61028690 0 - 77573801 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 25391 0 + 138751 C a score=130861.000000 s hg38.chr7_KI270899v1_alt 131995 33 + 190869 TATTTGTGAGTGAGG-CCGGG-GAATGAGGGGCAG s panTro5.chr7_NW_015973503v1_random 10236 33 + 11459 TATTTGTGAGTGAGG-CCAGG-GAATGAGGGGCAG i panTro5.chr7_NW_015973503v1_random C 0 N 0 s gorGor5.CYUI01015914v1 93060 33 - 432965 TATTTGTGAGTGAGG-CCGGG-GAATGAGGGGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152524 33 + 85365473 TATTTGTGAGTGAGG-CCGGG-GAATGAGGGGCGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999507 33 + 185818997 TGTTTGTGAGTGAGG-CAGCG-GGATGAGGGGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615468 33 + 192294377 TGTTTGTGAGTGAGG-CAGCG-GGATGAGGGGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382165 33 - 9440265 TGTTTGTGAGTGAGG-CAGCG-GGATGAGGGGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970562 34 - 21915920 TGTTTGTGAGTGAGGCCAGCG-GGATGAGGGGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 106392 33 - 21531802 GATTTGTGAGTGAGA-CAGCG-GGATGAGGGGCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130689 33 - 2515279 TGTTTGTGAGTGAGG-CAGCG-GGATGAGGGGCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296500 33 + 6586416 TGTCTGTGAGTGAGG-CAGCG-GGATGAGGGGCAG i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2235440 28 - 8137123 ---CTGCAAGTGGGG-CAATGAGGCTGCGTGG--- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61028690 8 - 77573801 ----------TGGGA-CAG---------------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505076 79 - 2125214 I e calJac3.chrUn_GL286444 25391 0 + 138751 C a score=1136163.000000 s hg38.chr7_KI270899v1_alt 132028 314 + 190869 TTGG--CTGCTGCTCTGGAGG-CCTGGGCGGCCTT--GGTGTCTGGGAGC---------CT----------CGGCCAG-GACACTGGC-CGG---T-GGGGCC----------CTCG-TGGCCC-TA---------------GCTGA--------CC------TTGACTTAC-----------------------------------TGCAGCTGGAGCGAA--GTCTCCCACAGG-----------TC---CTCCATCCTGCAGGGA--------------------------------------TTCGGGCATGACTAG-GGGTCAGGTGA-ATCTGAT-GGACAGCCCTGC----TGCATGAGTTCAGGCTGGGGCACT-CCTGCAGGAGACTG----------A-----GCGCCCAGCACTGTCCATGAGGAGGGGGATTCTGAGCAC--TCACTGTGGCTGT-GCCCCC-GACTCA-GCTGCAGCCTGGAGGGAGTG s gorGor5.CYUI01015914v1 93093 311 - 432965 TTGG--CTGCTGCTCTGGAGG-CCTGGGCGGCCTT--GGTGTCTGGGAGC---------CT----------CGGCCAG-GACACTGGC-TGG---T-GGGGCC----------CTCG-TGGCCC-TA---------------GCTGA--------CC------TTGACTTAC-----------------------------------CGCAGCTGGAGCAAA--GTCTCT-ACAGG-----------TC---CTCCATCCTGCAGGGA--------------------------------------TTCGGGCATGACTAG-GGGTCAGGGGA-ATCTGAT-GGACAGCCCTGC----TGCATGAGTTGAGGCTGGG-CACT-CCTGCAGGAGACTG----------A-----GAGCCCAGCCCTGTCCATGAGGAGGGGGATTCTGAGCAC--TCACTGTGGCTAT-GCCCC--GATTCA-GCTGCAGCCTGGAGGGAGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152557 305 + 85365473 TTGG--CTGCTGCTCTGGAGG-CCTGGGTGGCCTT--GGTGTCTGGGGGC---------CT----------TGGCCAG-GACACTGGC-CGG---C-GGGGCC----------CTCA-CGGCCC-TG---------------GCTGG--------CC------TTGACTTAC-----------------------------------CGCAGCTG---------GTCTCCCATGGG-----------TC---TTCCATCCTGCAGGGA--------------------------------------TTCGGGCATGACTGG-GGGATCGG-GA-ATCTGAT-GGACAG-CCTGC----TGCGTGAGTTGAGGCTGGAGCACT-CCTGCAGGAGACTA----------A-----GAGCCCAGCCCTGTCCATGAGGAGGGGGATTCTGAGCAC--TCACTGTGGCTGT-GCCCCT-GACTCA-GCTGCAGCCTGGAGGGAGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999540 314 + 185818997 TTGG--CTGCTGCTCTGGAGG-CCCGGGCGGCCTT--GGTGTCTGGGCGC---------CT----------CCGCCAG-AACGCTGGC-GGG---T-CGGGCC----------CTCA-TGGCCC-TG---------------GCTGA--------TC------TTGACTTAC-----------------------------------GGCAGCTGCAGCGAA--GTCTCCCACGGG-----------TC---TTCCATCCTGCAGGGA--------------------------------------TTCGGGCATGACTGG-GGGTCAGGGGA-ATCTGAT-GGACAGCCCTGC----TGCATGAGTTGAGGCTGGAGCGCT-CCTGCAGGAGACTG----------A-----GAGCCCAGCCCTGTCCATAAGGAGGGGAAGTCTGACCAC--TCGCTGTAGCTGT-GCCACC-TACTCA-GCTGCAGCCTGGAGGGAGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615501 314 + 192294377 TTGG--CTGCTGCTCTGGAGG-CCCGGGCGGCCTT--GGTGTCTGGGCGC---------CT----------CCGCCAG-AACGCTGGC-CGG---T-CGGGCC----------CTCA-TGGCCC-TG---------------GCTGA--------TC------TTGACTTAC-----------------------------------GGCAGCTGCAGCGAA--GTCTCCCACGGG-----------TC---TTCCATCCTGCAGGGA--------------------------------------TTCGGGCATGACTGG-GGGTCAGGGGA-ATCTGAT-GGACAGCCCTGC----TGCATGAGTTGAGGCTGGAGTGCT-CCTGCAGGAGACTG----------A-----GAGCCCAGCCCTGTCCATAAGGAGGGGAAGTCTGACCAC--TCGCTGTAGCTGT-GCCACC-TACTCA-GCTGCAGCCTGGAGGGAGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382198 314 - 9440265 TTGG--CTGCTGCTCTGGAGG-CCCGGGCGGCCTT--GGTGTCTGGGCGC---------CT----------CCGCCAG-AACGCTGGC-CGG---T-CAGGCC----------CTCA-TGGCCC-TG---------------GCTGA--------TC------TTGACTTAC-----------------------------------GGCAGCTGCAGCGAA--GTCTCCCACGGG-----------TC---TTCCATCCTGCAGGGA--------------------------------------TTCGGGCATGACTGG-GGGTCAGGGGA-ATCTGAT-GGACAGCCCTGC----TGCATGAGTTGAGGCTGGAGCGCT-CCTGCAGGAGACTG----------A-----GAGCCCAGCCCTGTCCATAAGGAGGGGAAATCTGACCAC--TCGCTGTAGCTGT-GCCACC-TACTCA-GCTGCAGCCTGGAGGGAGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970596 320 - 21915920 TTTGGCTTGCTGCTCTGGAGG-CCCGGGCGGCATT--GGTGTCTGGGCGC---------------------TCGCCAGAAACGCTGGC-CGG---TCCGGGCC----------CTCA-TGGCCCATG---------------GCTGA--------TC------TTGACTTAC-----------------------------------GGCAGCTGCAGCGAA--GCCTCCCACGGG-----------TC---TTCCATCCTGCAGGGA--------------------------------------TTCGGGCATGACT-A-GGGTCAGGGGA-ATCTGAT-GGACAGCCCTGC----TGCGTGAGTTGAGGCTGGAGCGCTCCCTGCAGGAGACTG----------A-----GAGCCCAGCCCTGTCCATAAGGAGGGGAAGTCTGACCACCTCCGCTGTAGCTGTCGCCACC-TACTCA-GCTGCAGCCTGGAGGGAGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 106425 313 - 21531802 TTGG--CTGCTGCTCTGGAGG-CCCAGGCGGCCTT--GGTGCCTAGGAGC---------CT----------CAGCCAG-GACGCTGGC-CGG---T-CGGGCC----------CTCA-TGGCCC-TG---------------GCTGA--------TC------TTGACTTAC-----------------------------------CGCAGCTGCAGTGAA--GTCTCCCACGGG-----------TC---TTCCATCCTGCAGGGA--------------------------------------TTCGGTCATGACGGG-GGGTCAGGGGA-ATCTGAC-GGACAGCCCTGC----TGCGTGAGTTGAGGCTGGAGCGCT-CCTG-AGGAGACTG----------A-----GAGCCCAGCCCTGTCCATAAGGAGGGGGAGTCTGACCAC--TCGCTGTGGCTGT-GCCCCC-TACTCA-GCTGCAGCCTGGAGGCAGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 130722 313 - 2515279 TTGA--CTGCTGCTCTGGAGG-CCCGGGCGGCCTT--GGTGTCTGGGCGC---------CT----------CCGCCAG-AACGCTGGC-CGG---T-CGGGCC----------CTCA-TGGCCC-TG---------------GCTGA--------TC------TTGACTTA------------------------------------GGCAGCTGCAGCGAA--GTCTCCCACGGG-----------TC---TTCCATCCTGCAGGGA--------------------------------------TTCGGGCACGACTGG-GGGTCAGGGGA-ATCTGAT-GGACAGCCCTGC----TGCGTGAGTTGAGGCTGGAGCGCT-CCTGCAGGAGACTG----------T-----GAGCCCAGCCCTGTCCATAAGGAGGGGAAGTCTGACCAC--TTGCTGTAGCTGT-GCCACC-TACTCA-GCTGCAGCCTGGAGGGAGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296533 314 + 6586416 CTGG--CTGCTGCTCTGGAGGCCCCGGGTGGCCTT--GGTGTCTGGGAGC---------CT----------TGGCCAG-GACGCTGGC-CGG---T-CGGGCC----------CTCA-TGGCCC-TG---------------GCTGA--------TC------TTGACTTAC-----------------------------------CGCAGCTAGAGCGAA--GTCTCCCACGGG-----------TC---TTCCATCCTGCAGGGA--------------------------------------TTCGGGCGTGACTGG-GGGTCAGGGGA-ATCTGAC-GGACAGCCCTGT----TGTGTGAGTTGAGGCTGCAGCGCT-CCTGCAGGAG-TTG----------A-----GAGCCCAGCCCTGTCCATAAGGAGGGGGAGTCTGACCAC--TCGCTGTGGCTGT-GCCCCC-TACTCA-GCTGCAGGCTGGAGGGAGTG i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2235468 342 - 8137123 TTGG--CTGCTGCTCCGGAAG-TCTGGGTGGCTCT--GTTATCTGGGAGCCTGGATTGTCT----------GCGTGGG-GACACTGCCGTAG---T-TGGGCCCAGGCTGACGCTGA-TGTCCC-AGGGAGCAGAGGAAGGTGCTGG--------CCAGGGTGCTGGGTGCT-----------------------------------GGGGGCAGGGGAGA---CTCTCCCTGAGG-----------TCTCTTTCCATCCTGCACTA---------------------------------------------TATGACCAATGTGTCTGG-------TGAT-GCGGAGCTCTGCCCATTGCTGAGATTTAAGTATGAGTGGG-GATCCAGGAAGATA----------GAGATTGAGCCCAGCCTTGCCTGT--GGATGATGAATCTGAGCAC--CCACTGTGGCTAC-ACTCCAGGACTCC-ACTACAGTC----------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61028698 426 - 77573801 ATGG--TTGCAACTCTGGAGG-CTGAGGTGGTCGTCCTGGGTCTGAGACC---------CTGGCACATCTCTGGCAGG-GACACTGCA-CTGCATT-TGGGCC----------TTCAGTGGCCC-AG---------------ACTAACAGGGAGCTC------CACACTTACAGGGAGCAGAGGATGGAGTCCAGGCTGGTGCTCTGGGCAGCTGAAGGCAATGCTCTCCCAAAGGATCACTTACCATC---CTCCATCTCCCAGAAAGGGGGCTTCTAGCCACTGAGACTCTGTCCACTCTGGAGTTTAGATACTACTAG-AAGTTCTGTGAGGTCTGATGGGACAGGCTCACTCTTTTCAGGAGTTGAGGCAAGATGACC-CCTCAAGTAGGCTGCCCAGGGGAAA-----CAGCCCAGCCTTGCCTGCGGGG----------------C--TGACTCTGGCCTT-ACCCCAGGACCCAGGATGTGGCCTAGAAGGAATG i canFam3.chr6 C 0 I 792 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505076 79 - 2125214 I e calJac3.chrUn_GL286444 25391 0 + 138751 C a score=42537.000000 s hg38.chr7_KI270899v1_alt 132342 12 + 190869 TCCAGCCCCAGG s gorGor5.CYUI01015914v1 93404 12 - 432965 CCCAGCCCCAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152862 12 + 85365473 CCCAGCCCCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999854 12 + 185818997 CCCAGCCCCAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615815 12 + 192294377 CCCAGCCCCAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382512 12 - 9440265 CCCAGCCCCAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970916 12 - 21915920 CCCAGCCCCAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 106738 12 - 21531802 CCCAGCCCCAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 131035 12 - 2515279 CCCAGCCCCAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296847 12 + 6586416 CACAGACCCCGG i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2235810 6 - 8137123 CCCATT------ i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61029124 792 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505076 79 - 2125214 I e calJac3.chrUn_GL286444 25391 0 + 138751 C a score=158520.000000 s hg38.chr7_KI270899v1_alt 132354 31 + 190869 GAAGGCAGAAAGCCCTTG--ACAAACCCTGGTG s gorGor5.CYUI01015914v1 93416 31 - 432965 GAAGGCAGAAAGCCCTTC--ACAAACCCTGGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152874 31 + 85365473 CAAGGCAGAAAGCCCTTC--ACAAACCCTGGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999866 31 + 185818997 GAAGGCAGAAAGCCCTTC--ACAAACCCTGGCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615827 31 + 192294377 GAAGGCAGAAAGCCCTTC--ACAAACCCTGGCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382524 27 - 9440265 GAAGGCAGAAAGCCCTTC------ACCCTGGCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970928 31 - 21915920 GAAGGCAGAAAGTCCTTC--ACAAACCCTGGCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 106750 31 - 21531802 GAAGGCAGAAAGCCCTTC--ACAAACCCTGGCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 131047 31 - 2515279 GAAGGCAGAAAGCCCTTC--ACAAACCCTGGCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296859 31 + 6586416 GAAGGCAGAAAGCCCTTC--ACAAACCCTGGCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 25391 31 + 138751 GAAGGCAGAAAACCCTTC--ACAAGCCCTAGCA i calJac3.chrUn_GL286444 C 0 C 0 s otoGar3.GL873611 2235816 33 - 8137123 GAAGGCAGAAAGCCCTTTCACCAAGCCTTAGTG i otoGar3.GL873611 C 0 I 589 e canFam3.chr6 61029124 792 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505076 79 - 2125214 I a score=10505.000000 s hg38.chr7_KI270899v1_alt 132385 2 + 190869 CT s gorGor5.CYUI01015914v1 93447 2 - 432965 CT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152905 2 + 85365473 CT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999897 2 + 185818997 CT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615858 2 + 192294377 CT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382551 2 - 9440265 CT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16970959 2 - 21915920 CT i cerAty1.NW_012002954v1 C 0 I 218 s chlSab2.chr28 106781 2 - 21531802 CT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 131078 2 - 2515279 CT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296890 2 + 6586416 CT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 25422 2 + 138751 CT i calJac3.chrUn_GL286444 C 0 C 0 e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505076 79 - 2125214 I a score=212584.000000 s hg38.chr7_KI270899v1_alt 132387 68 + 190869 CTGGCAGCCTGGTGGGCTGACAGGCAGCCCTGTCCCCATCCCTCCGCACGTCTCAGGCATGGCCTGCA s gorGor5.CYUI01015914v1 93449 68 - 432965 CTGGCAGCCTGGTGGGCTGACGGGCAGCCCTGTCCCCATCCCTCCGTACGTCTCAGGCATGGCCTGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152907 68 + 85365473 CTGGCTGCCTGGTGGGCTGACAGGCAGCCCTGTCCCCATCCCTCAGCGCGTCTCGGGCATGGCCTGCG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999899 68 + 185818997 ACGGCCGCCTGGTGGGCTGATGGGCAGCCCTGTCCCCATCCCTCTGTGCCTCTCGGGCAAGGCTTGCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615860 68 + 192294377 ACGGCCGCCTGGTGGGCTGATGGGCAGCCCTGTCCCCATCCCTCTGTGCCTCTCGGGCAAGGCTTGCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382553 68 - 9440265 ACGGCCGCCTGGTGGGCTGATGGGCAGCCCTGTCCCCATCCCTCCGTGCCTCTCGGGCAAGGCTTGAG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 106783 68 - 21531802 ACGGCCGCCTGGTGGGCTGATGGGCAGCCCTGTCGCCATCCCTCCGCACCTCTCGGGCAAGGCCTGCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 131080 68 - 2515279 ACGGCCGCCTGGTGGGCTGACGGGCAGCCCTGTCCCCATCCCTCCGCGCCTCTCGGGCAAGGCTTGCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 296892 68 + 6586416 ACGGCCGCCTGGTGGGCTGATGGGCAGCCCAGTCTCCATCCCTCTGCCCTTCTAGGGCAAGGCCTGCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 25424 56 + 138751 ------------TTGGCTGACAGTCAGCCCTGTCCTCATCCCCCCATGTGTCTTAACCTTGACCTGTG i calJac3.chrUn_GL286444 C 0 C 0 e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505076 79 - 2125214 I a score=105101.000000 s hg38.chr7_KI270899v1_alt 132455 30 + 190869 CGGGTCTCCT-CGCAGGTGCCCCCACACCCC s gorGor5.CYUI01015914v1 93517 30 - 432965 CGGGTCTCCT-CGCAGGTGCCCCAACACCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 152975 31 + 85365473 CGGGTCTCCTCCCCAGGTGTCCCCATGCCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999967 31 + 185818997 TAGGTGTCCTCTGCAGGTGCCCCCACACCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33615928 31 + 192294377 TAGGTGTCCTCTGCAGGTGCCCCCACAACCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382621 31 - 9440265 TAGGTGTCCTCTGAAGGTGCCCCCACACCCT i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 106851 30 - 21531802 C-GGTCTCCTCTGCAGGTGCCCCCACACCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 131148 31 - 2515279 CAGGTGTCCTCTGCAGGTGCCCCCACATCCC i manLeu1.NW_012101810v1 C 0 I 79 s colAng1.NW_012117710v1 296960 30 + 6586416 TGGGTCTCCTCTGCAGGTGCCCCC-CACCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 25480 31 + 138751 CGGGTCTCCTCCACAGGTGCCCCCACACCTC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505155 31 - 2125214 CGGGTCTCCTCCACAGGTGCCCCTGCACCTC i cebCap1.NW_016107703v1 I 79 C 0 e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=84802.000000 s hg38.chr7_KI270899v1_alt 132485 34 + 190869 ACCGTGCACGCCTGGCCATCTCCTAGAGAA------------------------------------AGGC s gorGor5.CYUI01015914v1 93547 34 - 432965 GCCATGCATGCCTGGCCATCTCCTAGAGAA------------------------------------AGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153006 66 + 85365473 GCCATGCATGCCTT----TCTCCTAGAAAAAGGCCGAGGCCCCCACCCGCCCCGTGCAGCTCGTTGAGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 33999998 30 + 185818997 GCCATGCATCC----CTATCTCCTAGAGAA------------------------------------AGGC i rheMac8.chr3 C 0 I 29 s macFas5.chr3 33615959 30 + 192294377 GCCATGCATCC----CTATCTCCTAGAGAA------------------------------------AGGC i macFas5.chr3 C 0 I 14 s macNem1.NW_012019910v1 4382652 34 - 9440265 GCCATGCATCCCTGACTATCTCCTAGAGAA------------------------------------AGGC i macNem1.NW_012019910v1 C 0 I 30 s chlSab2.chr28 106881 34 - 21531802 GCCATGCATGCCTGGCCATCTCCTAGAGAA------------------------------------AGGC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 296990 34 + 6586416 GCCATGCATGGCTGGCGGTCTCCTAGAGAA------------------------------------AGGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 25511 34 + 138751 ACCATGCACACCTAGCTGTCTCCTAGAGAA------------------------------------AGGC i calJac3.chrUn_GL286444 C 0 I 37 s cebCap1.NW_016107703v1 505186 34 - 2125214 ATCATGCACACCTAGCTGTCTCCTAGAGAA------------------------------------AGGC i cebCap1.NW_016107703v1 C 0 I 80 e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1500.000000 s hg38.chr7_KI270899v1_alt 132519 1 + 190869 C s gorGor5.CYUI01015914v1 93581 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153072 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s chlSab2.chr28 106915 1 - 21531802 C i chlSab2.chr28 C 0 I 57 s colAng1.NW_012117710v1 297024 1 + 6586416 C i colAng1.NW_012117710v1 C 0 I 57 s calJac3.chrUn_GL286444 25582 1 + 138751 C i calJac3.chrUn_GL286444 I 37 C 0 e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382686 30 - 9440265 I e macFas5.chr3 33615989 14 + 192294377 I e rheMac8.chr3 34000028 29 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I a score=8925.000000 s hg38.chr7_KI270899v1_alt 132520 22 + 190869 TCCCAGGCTGCTCAGGAGTGGC s gorGor5.CYUI01015914v1 93582 22 - 432965 TCCCAGGTTGCTCAGGAGTGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153073 22 + 85365473 TCCCGCGCTGCCCAGGAGTGGC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33616003 15 + 192294377 CCCCGTGCAGCTCGT------- i macFas5.chr3 I 14 C 0 s calJac3.chrUn_GL286444 25583 22 + 138751 TCCTGGCCTGCTCAGGAGTGGC i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382686 30 - 9440265 I e rheMac8.chr3 34000028 29 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I a score=42677.000000 s hg38.chr7_KI270899v1_alt 132542 27 + 190869 CAGGCTCCTCCTGCCCTCCTTCTCTTT s gorGor5.CYUI01015914v1 93604 27 - 432965 CAGGCTCCTCCTGCCCTCCTTCTCTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153095 27 + 85365473 CAGGCTCCTCCTGCACTCCTTCTCTTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34000057 27 + 185818997 CAGGCTCCTCCTGCGCTCCTTCTCTTT i rheMac8.chr3 I 29 C 0 s macFas5.chr3 33616018 27 + 192294377 CAGGCTCCTCCTGCGCTCCTTCTCTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382716 27 - 9440265 CAGGCTCCTCCTGCGCTCCTTCTCTTT i macNem1.NW_012019910v1 I 30 C 0 s calJac3.chrUn_GL286444 25605 25 + 138751 TGGGCTCTTCCCACGCTCCCTCTTT-- i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I a score=12741.000000 s hg38.chr7_KI270899v1_alt 132569 25 + 190869 GAGTGCTGAGCATGGGAGGCAGG--TG s gorGor5.CYUI01015914v1 93631 25 - 432965 GAGTGCTGAGCATGGGAGGCAGG--TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153122 25 + 85365473 GAGTGCTGAGCATGGGAGGCAGG--TG i nomLeu3.chr20 C 0 T 30 s calJac3.chrUn_GL286444 25630 27 + 138751 GAGTGCTAAGCATGGGAGGCAGGGTTG i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I a score=900.000000 s hg38.chr7_KI270899v1_alt 132594 3 + 190869 GGG s gorGor5.CYUI01015914v1 93656 3 - 432965 GGG i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 25657 3 + 138751 GGG i calJac3.chrUn_GL286444 C 0 I 548 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e nomLeu3.chr20 153147 30 + 85365473 T a score=782.000000 s hg38.chr7_KI270899v1_alt 132597 8 + 190869 GGCCAAGG s gorGor5.CYUI01015914v1 93659 8 - 432965 GGCCAAGG i gorGor5.CYUI01015914v1 C 0 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I e nomLeu3.chr20 153147 30 + 85365473 T a score=10795.000000 s hg38.chr7_KI270899v1_alt 132605 41 + 190869 TCTTTGAGTGCTGAGCATGGGAGGCAGGTGGGGGGCCAAGG s gorGor5.CYUI01015914v1 93667 41 - 432965 TCTTTGAGTGCTGAGCATGGGAGGCAGGAGGGGGGCCAAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153117 41 + 85365473 TCTTTGAGTGCTGAGCATGGGAGGCAGGTGGGGGGCCACAG i nomLeu3.chr20 T 30 T 41 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I a score=10149.000000 s hg38.chr7_KI270899v1_alt 132646 35 + 190869 TCTTTGAGTGCTGAGCATGGGAGGCAGGTGGGGGG s gorGor5.CYUI01015914v1 93708 35 - 432965 TCTTTGAGTGCTGAGCATGGGAGGCAGGTGGGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153117 35 + 85365473 TCTTTGAGTGCTGAGCATGGGAGGCAGGTGGGGGG i nomLeu3.chr20 T 41 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I a score=4176.000000 s hg38.chr7_KI270899v1_alt 132681 9 + 190869 CCAAGGTCT s panPan2.chr7 523260 9 + 162613886 CCAAGGTCT i panPan2.chr7 N 0 C 0 s gorGor5.CYUI01015914v1 93743 9 - 432965 CCAAGGTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153152 9 + 85365473 CCACAGTCT i nomLeu3.chr20 C 0 T 41 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I a score=12817.000000 s hg38.chr7_KI270899v1_alt 132690 26 + 190869 TTGGGTGCTGAGCATGGGAAGC-AGGT s panPan2.chr7 523269 27 + 162613886 TTGAGTGCTGAGCATGGGAAGCGAGGT i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01015914v1 93752 26 - 432965 TTGAGTGCTGAGCATGGGAGGC-AGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153120 26 + 85365473 TTGAGTGCTGAGCATGGGAGGC-AGGT i nomLeu3.chr20 T 41 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I a score=10476.000000 s hg38.chr7_KI270899v1_alt 132716 12 + 190869 GGGGGGCCAAGG s panTro5.chr7_NW_015973580v1_random 7423 12 - 83720 GGGGGGCCAAGG i panTro5.chr7_NW_015973580v1_random N 0 C 0 s panPan2.chr7 523297 12 + 162613886 GGGGGGCCAAGG i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01015914v1 93778 12 - 432965 GGGGGGCCAAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153146 12 + 85365473 GGGGGGCCACAG i nomLeu3.chr20 C 0 T 41 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I a score=27110.000000 s hg38.chr7_KI270899v1_alt 132728 30 + 190869 TCTTTGAGTGCTGAGCA-TGGGAGGCAGGTG s panTro5.chr7_NW_015973580v1_random 7435 30 - 83720 TCTTTGAGTGCTGAGCA-TGGGAGGCAGGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523309 31 + 162613886 TCTTTGAGTGCTGAGCAGTGGGAGGCAGGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93790 30 - 432965 TCTTTGAGTGCTGAGCA-TGGGAGGCAGGTG i gorGor5.CYUI01015914v1 C 0 T 41 s nomLeu3.chr20 153117 30 + 85365473 TCTTTGAGTGCTGAGCA-TGGGAGGCAGGTG i nomLeu3.chr20 T 41 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I a score=9476.000000 s hg38.chr7_KI270899v1_alt 132758 11 + 190869 GGGGGCCAAGG s panTro5.chr7_NW_015973580v1_random 7465 11 - 83720 GGGGGCCAAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523340 11 + 162613886 GGGGGCCAAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93779 11 - 432965 GGGGGCCAAGG i gorGor5.CYUI01015914v1 T 41 C 0 s nomLeu3.chr20 153147 11 + 85365473 GGGGGCCACAG i nomLeu3.chr20 C 0 T 41 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I a score=28830.000000 s hg38.chr7_KI270899v1_alt 132769 30 + 190869 TCTTTGAGTGCTGAGCATGGGAGGCAGGTG s panTro5.chr7_NW_015973580v1_random 7476 30 - 83720 TCTTTGAGTGCTGAGCATGGGAGGCAGGTG i panTro5.chr7_NW_015973580v1_random C 0 T 68 s panPan2.chr7 523351 30 + 162613886 TCTTTGAGTGCTGAGCATGGGAGGCAGGTG i panPan2.chr7 C 0 T 41 s gorGor5.CYUI01015914v1 93790 30 - 432965 TCTTTGAGTGCTGAGCATGGGAGGCAGGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153117 30 + 85365473 TCTTTGAGTGCTGAGCATGGGAGGCAGGTG i nomLeu3.chr20 T 41 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I a score=9476.000000 s hg38.chr7_KI270899v1_alt 132799 11 + 190869 GGGGGCCAAGG s panTro5.chr7_NW_015973580v1_random 83685 11 + 83720 GGGGGCCAAGG i panTro5.chr7_NW_015973580v1_random n 68 C 0 s panPan2.chr7 523340 11 + 162613886 GGGGGCCAAGG i panPan2.chr7 T 41 C 0 s gorGor5.CYUI01015914v1 93820 11 - 432965 GGGGGCCAAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153147 11 + 85365473 GGGGGCCACAG i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e calJac3.chrUn_GL286444 25660 548 + 138751 I a score=4230.000000 s hg38.chr7_KI270899v1_alt 132810 3 + 190869 TCT s panTro5.chr7_NW_015973580v1_random 83696 3 + 83720 TCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523351 3 + 162613886 TCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93831 3 - 432965 TCT i gorGor5.CYUI01015914v1 C 0 T 41 s nomLeu3.chr20 153158 3 + 85365473 TCT i nomLeu3.chr20 C 0 T 14 s calJac3.chrUn_GL286444 26208 3 + 138751 TCT i calJac3.chrUn_GL286444 I 548 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I a score=17666.000000 s hg38.chr7_KI270899v1_alt 132813 19 + 190869 TTGAGTGCTGAGCATGGGA s panTro5.chr7_NW_015973580v1_random 83699 19 + 83720 TTGAGTGCTGAGCATGGGA i panTro5.chr7_NW_015973580v1_random C 0 n 0 s panPan2.chr7 523354 19 + 162613886 TTGAGTGCTGAGCATGGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93793 19 - 432965 TTGAGTGCTGAGCATGGGA i gorGor5.CYUI01015914v1 T 41 C 0 s calJac3.chrUn_GL286444 26211 19 + 138751 TTGAGTGCTAAGCATGGGA i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e nomLeu3.chr20 153161 14 + 85365473 T a score=8315.000000 s hg38.chr7_KI270899v1_alt 132832 20 + 190869 AGCAGGTGGGGGGGCCAAGG s panPan2.chr7 523373 19 + 162613886 GGCAGGT-GGGGGGCCAAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93812 19 - 432965 GGCAGGT-GGGGGGCCAAGG i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 26230 20 + 138751 GGCAGGTTGGGGTGCCAAGG i calJac3.chrUn_GL286444 C 0 T 42 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 505220 80 - 2125214 I e nomLeu3.chr20 153161 14 + 85365473 T e panTro5.chr7_NW_015973580v1_random 83718 0 + 83720 I a score=2820.000000 s hg38.chr7_KI270899v1_alt 132852 3 + 190869 TCT s panPan2.chr7 523392 3 + 162613886 TCT i panPan2.chr7 C 0 T 14 s gorGor5.CYUI01015914v1 93831 3 - 432965 TCT i gorGor5.CYUI01015914v1 C 0 T 82 s calJac3.chrUn_GL286444 26208 3 + 138751 TCT i calJac3.chrUn_GL286444 T 42 C 0 s cebCap1.NW_016107703v1 505300 3 - 2125214 TCT i cebCap1.NW_016107703v1 I 80 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 153161 14 + 85365473 T e panTro5.chr7_NW_015973580v1_random 83718 0 + 83720 I a score=2820.000000 s hg38.chr7_KI270899v1_alt 132855 3 + 190869 TTG s panTro5.chr7_NW_015973580v1_random 7438 3 - 83720 TTG i panTro5.chr7_NW_015973580v1_random T 68 C 0 s gorGor5.CYUI01015914v1 93752 3 - 432965 TTG i gorGor5.CYUI01015914v1 T 82 C 0 s calJac3.chrUn_GL286444 26211 3 + 138751 TTG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505303 3 - 2125214 TTG i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 297025 57 + 6586416 I e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e chlSab2.chr28 106916 57 - 21531802 I e manLeu1.NW_012101810v1 131179 79 - 2515279 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e macNem1.NW_012019910v1 4382743 0 - 9440265 C e macFas5.chr3 33616045 0 + 192294377 C e rheMac8.chr3 34000084 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 153161 14 + 85365473 T e panPan2.chr7 523395 14 + 162613886 T a score=21010.000000 s hg38.chr7_KI270899v1_alt 132858 4 + 190869 AGTG s panTro5.chr7_NW_015973580v1_random 7441 4 - 83720 AGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 93755 4 - 432965 AGTG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34000084 4 + 185818997 AGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33616045 4 + 192294377 AGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382743 4 - 9440265 AGTG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 106973 4 - 21531802 AGTG i chlSab2.chr28 I 57 C 0 s manLeu1.NW_012101810v1 131258 4 - 2515279 AGTG i manLeu1.NW_012101810v1 I 79 C 0 s colAng1.NW_012117710v1 297082 4 + 6586416 AGTG i colAng1.NW_012117710v1 I 57 C 0 s calJac3.chrUn_GL286444 26214 4 + 138751 AGTG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505306 4 - 2125214 AGTG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2235849 589 - 8137123 I e canFam3.chr6 61029124 792 - 77573801 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 153161 14 + 85365473 T e panPan2.chr7 523395 14 + 162613886 T a score=107297.000000 s hg38.chr7_KI270899v1_alt 132862 20 + 190869 CTGAGCATGGGAGGCAGGTT s panTro5.chr7_NW_015973580v1_random 7445 20 - 83720 CTGAGCATGGGAGGCAGGTG i panTro5.chr7_NW_015973580v1_random C 0 I 41 s gorGor5.CYUI01015914v1 93759 20 - 432965 CTGAGCATGGGAGGCAGGTG i gorGor5.CYUI01015914v1 C 0 I 41 s rheMac8.chr3 34000088 20 + 185818997 CTGAGCATGGGAGGCAGGCG i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33616049 20 + 192294377 CTGAGCATGGGAGGCAGGCG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4382747 20 - 9440265 CTGAGCATGGGAGGCAGGCG i macNem1.NW_012019910v1 C 0 I 1 s chlSab2.chr28 106977 20 - 21531802 CTGAGCATGGGAGGCAGGCG i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 131262 20 - 2515279 CTGAGCATGGGAGGCAGGCG i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 297086 20 + 6586416 CTGAGCATGGGAGGCAGGCG i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chrUn_GL286444 26218 20 + 138751 CTAAGCATGGGAGGCAGGTT i calJac3.chrUn_GL286444 C 0 I 1 s cebCap1.NW_016107703v1 505310 20 - 2125214 CTGAGCATGGGAGGCAGGCG i cebCap1.NW_016107703v1 C 0 I 1 s otoGar3.GL873611 2236438 20 - 8137123 CTGAACATGAGAGGCCCTCA i otoGar3.GL873611 I 589 C 0 e canFam3.chr6 61029124 792 - 77573801 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 153161 14 + 85365473 T e panPan2.chr7 523395 14 + 162613886 T a score=18388.000000 s hg38.chr7_KI270899v1_alt 132882 7 + 190869 -GGGGGCC s panTro5.chr7_NW_015973580v1_random 7506 7 - 83720 -GGGGGCC i panTro5.chr7_NW_015973580v1_random I 41 C 0 s panPan2.chr7 523381 7 + 162613886 -GGGGGCC i panPan2.chr7 T 14 C 0 s gorGor5.CYUI01015914v1 93820 7 - 432965 -GGGGGCC i gorGor5.CYUI01015914v1 I 41 C 0 s nomLeu3.chr20 153147 7 + 85365473 -GGGGGCC i nomLeu3.chr20 T 14 C 0 s rheMac8.chr3 34000109 6 + 185818997 -GGATGC- i rheMac8.chr3 I 1 I 1 s macFas5.chr3 33616070 6 + 192294377 -GGATGC- i macFas5.chr3 I 1 I 1 s macNem1.NW_012019910v1 4382768 6 - 9440265 -GGATGC- i macNem1.NW_012019910v1 I 1 I 1 s chlSab2.chr28 106998 6 - 21531802 -GGGTGC- i chlSab2.chr28 I 1 I 1 s manLeu1.NW_012101810v1 131283 6 - 2515279 -GGATGC- i manLeu1.NW_012101810v1 I 1 I 1 s colAng1.NW_012117710v1 297107 6 + 6586416 -GGGTGC- i colAng1.NW_012117710v1 I 1 I 1 s calJac3.chrUn_GL286444 26239 7 + 138751 -GGGTGCC i calJac3.chrUn_GL286444 I 1 C 0 s cebCap1.NW_016107703v1 505331 7 - 2125214 -GGGTGCC i cebCap1.NW_016107703v1 I 1 C 0 s otoGar3.GL873611 2236458 8 - 8137123 GGGGCACC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61029124 792 - 77573801 I e cerAty1.NW_012002954v1 16970961 218 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=367100.000000 s hg38.chr7_KI270899v1_alt 132889 48 + 190869 AAGGTCTGAGCCTT-TTGGAAG-CACCCATC---ATCTGGTTCTCAAGTCAAC s panTro5.chr7_NW_015973580v1_random 7513 48 - 83720 AAGGTCTGAGCCTT-TTGGAAG-CACCCATC---GTCTGGTTTTCAAGTCAAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523388 48 + 162613886 AAGGTCTGAGCCTT-TTGGAAG-CACCCATC---GTCTGGTTTTCAAGTCAAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93827 48 - 432965 AAGGTCTGAGCCTT-TTGGAAG-CACCCATC---GTCTGGTTTTCAAGTCAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153154 48 + 85365473 ACAGTCTGAGCCTT-TTGGAAG-CACCCATC---ATCTGGTTTTCAAGTCAAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34000116 51 + 185818997 AAGGTCTGAGCCTT-TCAGAAG-CACCCATCATTGTCTGGTTTTCAAGTCAAC i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33616077 51 + 192294377 AAGGTCTGAGCCTT-TCAGAAG-CACCCATCATTGTCTGGTTTTCAAGTCAAC i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4382775 51 - 9440265 AAGGTCTGAGCCTT-TCAGAAG-CACCCATCATTGTCTGGTTTTCAAGTCAAC i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16971179 51 - 21915920 AAGGTCTGAGCCTT-TCGGAAG-CACCCATCATTGTCTGGTTTTCAAGTCAAC i cerAty1.NW_012002954v1 I 218 C 0 s chlSab2.chr28 107005 51 - 21531802 AAGGTCTGAGCCTT-TCGGAAG-CACCCATCATTGTCTGGTTTTCAAGTCAAC i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 131290 51 - 2515279 AAGGTCTGAGCCTT-TCGGAAG-CACCCATCATTGTCTGGTTTTCAAGTCAAC i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 297114 51 + 6586416 AAGGTCTGAGCCTT-TTGGAAG-CACCCATCATTGTCTGGTTTTCAAGTCAAC i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chrUn_GL286444 26246 48 + 138751 AAGGTTGGAGCCTT-TCGGAAGCCCCCGATT---GTCTGGTTTTCAGGTCAA- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505338 48 - 2125214 AAGGTTGGAGCCTT-TCAGAAG-CCCCGATT---GTGTGGTTTTCAAGTCAAC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2236466 49 - 8137123 AGGATCTGAGCCTTCTCAGAAA-GGGCCATT---GTCTAGTTTTGAAATCAAC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61029124 792 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=71240.000000 s hg38.chr7_KI270899v1_alt 132937 8 + 190869 T-CTGATTT s panTro5.chr7_NW_015973580v1_random 7561 8 - 83720 T-CTGATTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523436 8 + 162613886 T-CTGATTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93875 8 - 432965 T-CTGATTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153202 8 + 85365473 T-CTGATTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34000167 8 + 185818997 T-CCGATTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33616128 8 + 192294377 T-CCGATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382826 8 - 9440265 T-CCGATTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16971230 8 - 21915920 T-CCGATTT i cerAty1.NW_012002954v1 C 0 I 295 s chlSab2.chr28 107056 8 - 21531802 T-CTGATTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 131341 8 - 2515279 T-CCGATTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 297165 8 + 6586416 T-CTGATTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 26294 7 + 138751 --CTGATTT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505386 8 - 2125214 T-CTGATTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2236515 9 - 8137123 TCCTGATTT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61029916 8 - 77573801 T-CTAGTTT i canFam3.chr6 I 792 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=382614.000000 s hg38.chr7_KI270899v1_alt 132945 48 + 190869 TCACGTCACTGGTGATTACTTCATTTTAAAAGGTAGCCTCCTGTTTTG s panTro5.chr7_NW_015973580v1_random 7569 48 - 83720 TCACGTCACTGGTGATTACTTTGTTTTAAAAGGTAACCTCCTGTTTTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523444 48 + 162613886 TCACGTCACTGGTGATTACTTTGTTTTAAAAGGTAACCTCCTGTTTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93883 48 - 432965 TCACGTCACTGGTGATTACTTTGTTTTAAAAGGTAACCTCCTGTTTTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153210 48 + 85365473 TCACGTCACTGGTGATTACTTTGTTTTAAAAGGTAACCTCTTGTTTTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34000175 48 + 185818997 TCACATCCCTGGTGATTACTTTGTTTTAAAAGGTAACCTCCTGTTTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33616136 48 + 192294377 TCACATCCCTGGTGATTACTTTGTTTTAAAAGGTAACCTCCTGTTTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382834 48 - 9440265 TCACATCCCTGGTGATTACTTTGTTTTAAAAGGTAACCTCCTGTTTTG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 107064 48 - 21531802 TCATGTCCCTGGTGATTACTTCATTTTAAAAGGTAACCTCCTGTTTTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 131349 48 - 2515279 TCACATCCCTGGTGATTACTTCGTTTTAAAAGGTAACCTCCTGTTTTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 297173 48 + 6586416 TCACGTCCCTGGTGATTACTTCGTTTTAAAAGGTAACTTCCTGTTTTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 26301 48 + 138751 CCATGTCACTGGTGATTACTTTGTTTTAAAATGTAACCTCCTGCTTTG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505394 48 - 2125214 CCATGTCACTGGTGATTACTTTGTTTTAAAAGGTAACCTCCTGTTTTG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2236524 47 - 8137123 TCAAATCACTGGGGATTACTTTGTATT-AAAGGTAATCTTCTGGTTTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61029924 47 - 77573801 TCAAATTACTGGTGATCACTTCATATT-AAAGATAATCTTCCGATTTG i canFam3.chr6 C 0 C 0 e cerAty1.NW_012002954v1 16971238 295 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=17381.000000 s hg38.chr7_KI270899v1_alt 132993 2 + 190869 GA s panTro5.chr7_NW_015973580v1_random 7617 2 - 83720 GA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523492 2 + 162613886 GA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93931 2 - 432965 GA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153258 2 + 85365473 GA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34000223 2 + 185818997 GA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33616184 2 + 192294377 GA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382882 2 - 9440265 GA i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 107112 2 - 21531802 GA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 131397 2 - 2515279 GA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 297221 2 + 6586416 GA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 26349 2 + 138751 GA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505442 2 - 2125214 GA i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61029971 2 - 77573801 GA i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2236571 0 - 8137123 C e cerAty1.NW_012002954v1 16971238 295 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1022757.000000 s hg38.chr7_KI270899v1_alt 132995 182 + 190869 GGtgtgaactaaaagcat--aaccctgaatccc-cccc--tccactgactgaatg--acccttctcggtcaagg-ggacccagagaaacctgaaaagctgagttccaggccctgacagg-aagggggtcagacatgcctcgtcatactccctccctttgggagtttagacacaactgaccagcagtaatgt s panTro5.chr7_NW_015973580v1_random 7619 184 - 83720 GGtgtgaactaaaagcat--aaccctgaatccc-cccc-ctccactgactgaacg-gacccttcttggtcaagg-ggacccagagaaacctgaaaagctgagttccaggccctgacacg-aagggggtcagacatgcctcgtcatactccctccctttgggagtttagacacaactgaccagcagtaatgt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523494 184 + 162613886 GGtgtgaactaaaagcat--aaccctgaatccc-ccac-ctccactgactgaacg-gacccttcttggtcaagg-ggacccagagaaacctgaaaagctgagttccaggccctgacacg-aagggggtcagacatgcctcgtcatactccctccctttgggagtttagacacaactgaccagcagtaatgt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 93933 185 - 432965 GGtgtgaactaaaagcat--aaccctgaatccc-ccccactccactgactgaacg-gacccttcttggtcaagg-ggacccagagaaacctgaaaagctgagctccaggccctgacagg-aagggggtcagacatgcctcgtcatactccctccctttcggagtttagacacaactgaccagcagtaatgt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153260 178 + 85365473 GGtgtgaactaaaaatat--aac-------ccc-cccc-gccgactgactgaatg-gacccttcttggtcaagg-ggacccagagaaacctgaaaagctgagttccaggccctgacaggcaggggggtcagacatgcctcgtcatactccctcccttttggagtttagacacaaatgaccagcagcaatgt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34000225 174 + 185818997 GG-gtgaactaaaaatag--aaccctgaatcccgcccc-ccacaccgactgaacg-gccccttcttggtcaagg-agaccaag-----------gagctgagttccaggccctaacaggaaggggggtcagacacgcctcatcacactccctccctttcggagttcagacacaactgaccagcaggaatgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33616186 185 + 192294377 GG-gtgaactaaaaatag--aaccctgaatcccgcccc-ccacaccgactgaacg-gccccttcttggtcaagg-agacccagagaaacctgaaaagctgagttccaggccctaacaggaaggggggtcagacacgcctcatcacactccctccctttcggagttcagacacaactgaccagcaggaatgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4382884 186 - 9440265 GG-gtgaactaaaaatagttccccctgaatccc-cccc-ccacaccgactgaacg-gccccttcttggtcaagg-agacccagagaaacctgaaaagctgagttccaggccctaacaggaaggggggtcagacacgcctcatcacactccctccctttcggagttcagacacaactgaccagcaggaatgt i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 107114 185 - 21531802 GG-gtgaactaaaaatag--aaccctgaatccaccccc-ccacaccgactgaacg-gccccttcttggtcaagg-aggcccagagaaacctgaaaagctgagttccaggccctgacaggaagggggctcagacacggctcgtcacactccctccctttcggagttcagacacaactgaccagcaggaatgt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 131399 183 - 2515279 GG-gtgaactaaaaatag--aaccctgaatc--ccccc-ccacactgactgaacg-gccccttcttggtcaagg-agacccagagaaacctgaaaagctgagttccaggccctaacaggaaggggggtcagacacgcctcgtcacactccctccctttcggagttcagacacaactgaccagcaggaatgt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 297223 182 + 6586416 AG-gtgaactaaaagtag--aactctgaatc---cccc-tgacaccgactgaacg-gccccttcttggtcaagg-agacccagagaaaccggaaaagctgagttccaggccccgacaggaaggggggtcagacatgcttcgtcacactccctccctttcggagtttagacacaactgaccagcaggaatgt i colAng1.NW_012117710v1 C 0 I 308 s calJac3.chrUn_GL286444 26351 183 + 138751 GAtgtgaacaaaaaatat--aaccc-gaat----cccc-tgccactgaatgaatgggccccttcttggtcaaggaaaatccagagaaacctgaaaagctgagttccaggccctgacaggaagggaggtcagacatacctcgtcatactccctccctttgggagttcagacacaactgaccagcattaatgt i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505444 185 - 2125214 GAtgtgaacaaaaaatgt--aaccctgaatc---cccc-cgccactgaatgaatgggccccttcttggtcaagggaaatccagagaaacctgaaaagctgagttccaggccctgacaggaagggaggtcagacattccttgtcatattccctccttttcagagttcagacacaactgaccagcattaacgt i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2236571 0 - 8137123 C e canFam3.chr6 61029973 0 - 77573801 C e cerAty1.NW_012002954v1 16971238 295 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=462301.000000 s hg38.chr7_KI270899v1_alt 133177 81 + 190869 taaaacggagatcttaagactgacaaagcagactcttggtggcaataggataccgaattataacaggacccgaggccgcac s panTro5.chr7_NW_015973580v1_random 7803 81 - 83720 taaaacggagatcttaagactgacaaagcagactcttggtggcaataggataccgaattataacaggacccgaggccgcac i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523678 81 + 162613886 taaaacggagatcttaagactgacaaagcagactcttggtggcaataggataccgaattataacaggacccaaggccgcac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94118 81 - 432965 taaaacagagatcttaaggctgacaaagcagactcttggtggcaataggataccgaattataacaggacccgaggccgcac i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153438 63 + 85365473 gaaaacggagatcttaagactgacaaagcagactcttggtggcaatagggtaccgaatta------------------cac i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34000399 81 + 185818997 taaaacagagatcttaagacggacagagcagattcttggtggcgataaggtaccaaattataacaggacctgaggccgcac i rheMac8.chr3 C 0 I 255 s macFas5.chr3 33616371 81 + 192294377 taaaacagagatcttaagacggacagagcagattcttggtggcgataaggtaccaaattataacaggacctgaggccgcac i macFas5.chr3 C 0 I 255 s macNem1.NW_012019910v1 4383070 81 - 9440265 taaaacagagatcttaagactgacagagcagattcttggtggcgataaggtaccaaattataacaggacctgaggccgcac i macNem1.NW_012019910v1 C 0 I 253 s chlSab2.chr28 107299 81 - 21531802 taaaacagagatcttaagacggacaaagcagactcttggtggcgataaggtaccaaattataacaggacctgaggcTGCAC i chlSab2.chr28 C 0 I 246 s manLeu1.NW_012101810v1 131582 81 - 2515279 taaaacagagatcttaagacggacagagcagactcttggtggccataaggtaccaaattgtaacaggacctgaggccgcac i manLeu1.NW_012101810v1 C 0 I 8912 s colAng1.NW_012117710v1 297713 80 + 6586416 taaaacagagatcttaagacagacaaagcagactcttggtggccat-aggtaccaaattataacaggacctgaggctgcac i colAng1.NW_012117710v1 I 308 C 0 s calJac3.chrUn_GL286444 26534 78 + 138751 taaaacacaaatcataggactgacaaagcagactct---cggcaataggatgctaaattataacaggacctgaggccacac i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505629 78 - 2125214 taaaacagagatcttaggactgacaaagcagactct---tggcaataggatgctaaattatgacaggatctgaggtcacac i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2236571 0 - 8137123 C e canFam3.chr6 61029973 0 - 77573801 C e cerAty1.NW_012002954v1 16971238 295 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=57774.000000 s hg38.chr7_KI270899v1_alt 133258 32 + 190869 aaggcaggggtGGGTCCCACCTGCAGGCTGAG s panTro5.chr7_NW_015973580v1_random 7884 32 - 83720 aaggcaggggtGGGTCCCACCTGTAGGCTGAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523759 32 + 162613886 aaggcaggggtGGGTCCCACCTGTAGGCTGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94199 32 - 432965 aaggcaggggtGGGTCCCACCTGCAGGCTGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153501 31 + 85365473 aaggcaggggtggctcccacctgtaggctag- i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 297793 29 + 6586416 aaggcaggggtGAGTC---CCTGCAGGCTGAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 26612 31 + 138751 aaggta-gggtgagtcCTACCTGCAAGCTGAG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505707 31 - 2125214 aaggca-gggtgagtcccacCCGCTGGCTGTG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2236571 0 - 8137123 C e canFam3.chr6 61029973 0 - 77573801 C e chlSab2.chr28 107380 246 - 21531802 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16971238 295 - 21915920 I e macNem1.NW_012019910v1 4383151 253 - 9440265 I e macFas5.chr3 33616452 255 + 192294377 I e rheMac8.chr3 34000480 255 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=77400.000000 s hg38.chr7_KI270899v1_alt 133290 37 + 190869 CAGGACCTG--AGGCTGCACCTGTAGGCTACAGATCCTG s panTro5.chr7_NW_015973580v1_random 7916 37 - 83720 CAGGACCTG--AGGCTGCACCTGTAGGCTACAGATCCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523791 37 + 162613886 CAGGACCTG--AGGCTGCACCTGTAGGCTACAGATCCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94231 37 - 432965 CAGGACCTG--AGGCTGCACCTGTAGGCTACGGATCCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153532 23 + 85365473 -agatcctgctagacaacaccctt--------------- i nomLeu3.chr20 C 0 C 0 s cerAty1.NW_012002954v1 16971533 37 - 21915920 caggacctg--aggccGCACCTGTAGGCTACAGATCCTG i cerAty1.NW_012002954v1 I 295 I 408 s colAng1.NW_012117710v1 297822 37 + 6586416 CAGGacctg--aggccgcacctgtaggctacggatcctg i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chrUn_GL286444 26643 36 + 138751 CAAGA-CTA--aggctgcacctgtaagctacggatcctg i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505738 36 - 2125214 CAGGA-TTA--AGGCTACACCTGTAAGCTACGGATACTG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2236571 0 - 8137123 C e canFam3.chr6 61029973 0 - 77573801 C e chlSab2.chr28 107380 246 - 21531802 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e macNem1.NW_012019910v1 4383151 253 - 9440265 I e macFas5.chr3 33616452 255 + 192294377 I e rheMac8.chr3 34000480 255 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=4197.000000 s hg38.chr7_KI270899v1_alt 133327 7 + 190869 TAGCAGG s panTro5.chr7_NW_015973580v1_random 7953 7 - 83720 TAGCAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523828 7 + 162613886 TAGCAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94268 7 - 432965 TAGCAGG i gorGor5.CYUI01015914v1 C 0 C 0 s colAng1.NW_012117710v1 297860 7 + 6586416 tagacaa i colAng1.NW_012117710v1 I 1 I 7 s calJac3.chrUn_GL286444 26679 7 + 138751 ctgcaca i calJac3.chrUn_GL286444 C 0 I 8 s cebCap1.NW_016107703v1 505774 7 - 2125214 CTGCACG i cebCap1.NW_016107703v1 C 0 I 8 e otoGar3.GL873611 2236571 0 - 8137123 C e canFam3.chr6 61029973 0 - 77573801 C e chlSab2.chr28 107380 246 - 21531802 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16971570 408 - 21915920 I e macNem1.NW_012019910v1 4383151 253 - 9440265 I e macFas5.chr3 33616452 255 + 192294377 I e rheMac8.chr3 34000480 255 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 153555 0 + 85365473 C a score=655554.000000 s hg38.chr7_KI270899v1_alt 133334 134 + 190869 ATCTTAACTTAAACGTTCCAAGTtttagacagagccttgctcctctcaccaacaggaactcaaagaatctctggatccatctatatcctgtaagcccccttcaaggtgtcccacctccaaaggccgagccagtg s panTro5.chr7_NW_015973580v1_random 7960 134 - 83720 ATCTTAACTTAAACGTTCCAAGTtttagacagagccttgctcctctcaccaacaggaactcaaagaatctctggatccatctgtatcctgtaagcccccttcaaggtgtcccacctccaaaggccgagccagtg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523835 134 + 162613886 ATCTTAACTTAAACGTTCCAAGTtttagacagagccttgctcctctcaccaacaggaactcaaagaatctctggatccatctatatcctgtaagcccccttcaaggtgtcccacctccaaaggccgagccagtg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94275 133 - 432965 ATCTTAACTTAAACGTTCCAAGTtttagacagagccttgctcctctcaccaacaggaactcaaagaatctctggatccatctatatcctgtaag-ccccttcaaggtgtcccacctccaaaggccgagccagtg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153555 134 + 85365473 atcttcacttacacgttccaagtttcagacagagccttgctcctctcaccaacaggaactcaaagaatctctggatccatctgtatcctgtaaacccccttcgaggtgtcccacctccaaaggccgagccagtg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34000735 132 + 185818997 atcttaacctaaacgtgccaagttttagacagagccttgctcctctcattaacaggaactc--agagtctctggatccacctacatcctgtaagtacccttcaagatgtcccacctccacaggccgagccagcc i rheMac8.chr3 I 255 C 0 s macFas5.chr3 33616707 132 + 192294377 atcttaacctaaacgtgccaagttttagacagagccttgctcctctcatcaacaggaactc--agagtctctggatccacctacatcctgtaagtacccttcaagatgtcccacctccacaggccgagccagcc i macFas5.chr3 I 255 C 0 s macNem1.NW_012019910v1 4383404 132 - 9440265 atcttaacctaaacgtgccaagttttagacagagccttgctcctctcatcaacaggaactc--agagtctctggatccacctacatcctgtaagtacccttcaagatgtcccacctccacaggccgagccagcc i macNem1.NW_012019910v1 I 253 C 0 s chlSab2.chr28 107626 132 - 21531802 atcttaacctaaacgtgccaagttttagacagagccttgctcctctcatcaacaggaactc--agagtctctggatccacctacatcctgtaagcctccttcaagatgtcccgcctccacaggccgagccagcc i chlSab2.chr28 I 246 C 0 s colAng1.NW_012117710v1 297874 132 + 6586416 atcttaacctaaacgtgccaagttttagacagagccttgctcctctcatcaacgggaactc--agagtctctggatccacctacatcctctaagcacctttcaagacgccctgcctccacaggccgagccagcc i colAng1.NW_012117710v1 I 7 C 0 s calJac3.chrUn_GL286444 26694 130 + 138751 atcttaacttaaatgttctaagtgtt----agagtcttgctcctctcaccaatagcacatcaaagaatctccggatccacctacatcctgtaagcccccttcaaaatggcccagctccaaaggccagacgaaca i calJac3.chrUn_GL286444 I 8 C 0 s cebCap1.NW_016107703v1 505789 130 - 2125214 atcttaacttaaatgttccaagtgtt----agagccttgctcctctcaccaacagcacatcaaagaatctccggatccacctatatcctgtaagcccccttgaagatggcccacctccaaaggccagaccaaca i cebCap1.NW_016107703v1 I 8 C 0 e otoGar3.GL873611 2236571 0 - 8137123 C e canFam3.chr6 61029973 0 - 77573801 C e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16971570 408 - 21915920 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1192483.000000 s hg38.chr7_KI270899v1_alt 133468 197 + 190869 tggacctgccatgcatggct-gtatgtctt-tgcctataactcctgcctccctgagatgtcaaaaccaaactgcaatccgatctcctcaggcacacgttctcag-------------------------gactcgctgggaccgtgtctgtctggctgtgtcactcactggctcagaagaaacctctttaaaatattttacagagtttggtttttccatcaaca s panTro5.chr7_NW_015973580v1_random 8094 197 - 83720 tggacctgccatgcatggct-gtatgtctt-tacctgtaactcctgcctccctgagatgtcaaaaccaaactgcaatccgatctcctcaggcacacgttctcag-------------------------gactcgctgggaccgtgtctgtctggctgtgtcactcactggctcagaagaaacctctttaaaatattttacagagtttggtttttccatcaaca i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 523969 197 + 162613886 tggacctgccatgcatggct-gtatgtctt-tacctgtaactcctgcctccctgagatgtcaaaaccaaactgcaatccgatctcctcaggcacacgttctcag-------------------------gactcgctgggaccgtgtctgtctggctgtgtcactcactggctcagaagaaacctctttaaaatattttacagagtttggtttttccatcaaca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94408 196 - 432965 tggacctgccatgcatggct-gtatgtctt-tgcctgtaactcctgcctccctgagatgtcaaaaccaaactgcaatccgatctccgcaggcaca-gttctcag-------------------------gactcactgggaccgtgtctgtctggctgtgtcactcattggctcagaagaaacctctgtaaaatattttacagagtttggtttttccatcaaca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153689 197 + 85365473 tggacctgccatgcatggtt-gtatgtctt-tacctgtaactcctgcctccctgagatgtcaaaaccaaactgcaatccgatctcctcaggcacacgttctcag-------------------------gactcactgggactgtgtctgtctggctgtgtcacacactggctcagaagaaacctctttaaaatattttacagggtttagtttttccatcaaca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34000867 195 + 185818997 tggacctgccatgcatggct-gtatgtctt-tgcctgtaactcctgcctccctgagacgtcaaaaccaaactgcaatcccatctcctcgggcgcacgttctcag-------------------------gattcgctgggactgtgtctgtctggctgtgtcactcattggctcagaagaaacctcttcaaaatatttt--agagtttggtttttccatcaaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33616839 195 + 192294377 tggacctgccatgcatggct-gtatgtctt-tgcctgtaactcctgcctccctgagacgtcaaaaccaaactgcaatcccatctcctcgggcgcacgttctcag-------------------------gattcgctgggactgtgtctgtctggctgtgtcactcattggctcagaagaaacctcttcaaaatatttt--agagtttggtttttccatcaaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4383536 195 - 9440265 tggacctgccatgcatggct-gtatgtctt-tgcctgtaactcctgcctccctgagacgtcaaaaccaaactgcaatcccatctcctcgggcgcacgttctcag-------------------------gattcgctgggactgtgtctgtctggctgtgtcactcattggctcagaagaaacctcttcaaaatatttt--agagtttggtttttccatcaaca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16971978 204 - 21915920 tggacctgccatgcatggctggtatgtctt-tgcct-taactcctgcctccctgaga-gtcaaaaccaaactgcaatcccatctcctc---------------gnnnnnnnnnnnnnnnnnnnnnnnnngattcgctgggactgtgtctgtctggctgtgtcactcattggctcagaagaaacctcttcaaaatatttt--agagtttggtttttccatcaaca i cerAty1.NW_012002954v1 I 408 C 0 s chlSab2.chr28 107758 194 - 21531802 tggacctgccatgcatggct-gtatgtctt-tgcctgtgactcctgcctccctgagacgtc-gaaccaaaccgcaatcccatctcctcgggcgcacgttctcag-------------------------gattcgctgggactgtgtctgtctggctgtgtcactcattggctcagaagaaacctcttcaaaatatttt--agagtttggtttttccatcacca i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 298006 195 + 6586416 tggatctgccatgcatggct-ggatgtctt-tgcctgtgactcctgcctccctgagacgtcaaaaccaaactgcaatcccatctcctccggcgcacgttctcag-------------------------gattcgctgggactgtgtctatccggctgtgtcactcattggctcagaagaaacctcttcaaaatatttt--agggtttggtttttccgtcaaca i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 26824 196 + 138751 gcgacctgccacgcactgct-atatgtcttccccccgtaactcccacctctctcagatgttaaaaacaaactacaatccgatctcctcaggcacactttctca--------------------------gattcactgggactgtgtctctctggccgtgtcactcattggctcagaagaaacctctttaaaatattttacagagtttga-ttttccatcaaca i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 505919 196 - 2125214 gcgacctgccacgcactgct-gtatatctt-cgcctgtaactcccacctctctcggatgttaaaaccaaactacaatccgatctcctcaggcgcactttctca--------------------------gattcactgggactgtgtctctctggctgtgtcactcattggctcagaagaaacctctttaaaatattttacagagtttggtttttccatcaaca i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2236571 0 - 8137123 C e canFam3.chr6 61029973 0 - 77573801 C e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=330159.000000 s hg38.chr7_KI270899v1_alt 133665 52 + 190869 GAGAAAAGACTTGGAATATGCAGGAAAGACTTG----ATCAATTTCAGGTGGTGGG s panTro5.chr7_NW_015973580v1_random 8291 52 - 83720 GAGAAAAGACTTGGAATATGCAGGAAAGACTTG----ATCAATTTCAGGTGCTGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524166 52 + 162613886 GAGAAAAGACTTGGAATATGCAGGAAAGACTTG----ATCAATTTCAGGTGCTGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94604 52 - 432965 GAGAAAAGACTTGGAATATGCAGGAAAGACTTG----ATCAATTTCAGGTGGTGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153886 52 + 85365473 GAGAAAAGACTTGGAATATGCAGGAAAAACTTG----ATCAATTTCAGGTGGTGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001062 52 + 185818997 GAGAAAAGACTTGGAAAATGCAGGGAAGGCTTG----ATGTATTTCAGGTCGTGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617034 52 + 192294377 GAGAAAAGACTTGGAAAATGCAGGGAAGGCTTG----ATGTATTTCAGGTCGTGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4383731 52 - 9440265 GAGAAAAGACTTGGAATATGCAGGGAAGGCTTG----ATGTATTTCAGGTCGTGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972182 52 - 21915920 GAGAAAAGACTTGGAATATGCAGGGAAGGCTTG----ATGTATTTCAGGTCGTGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 107952 51 - 21531802 GAG-AAAGACTTGGAATATGCAGGGAAGGCTCA----ATGTATTTCAGGTCGTGGG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 298201 56 + 6586416 GAGAAAACACTTGGAATATGCAGGGAAGACTTGATGTATGTATTTCAGGTCGTGGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27020 52 + 138751 GAAAAGAGACTTAGAATATGCAGGCAAGACTTG----ATATATTTCACGTGGTGGA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 506115 52 - 2125214 GAAAGAAGACTTAGAATATGCAGGCAAGACTTG----ATATATTTCATGTGGTGGA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2236571 52 - 8137123 GAGGAAAGATTTAGAGCATGTATGCAAGATTTG----ATAGATTTCATATGATGGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61029973 0 - 77573801 C e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1295001.000000 s hg38.chr7_KI270899v1_alt 133717 208 + 190869 CAGAATGCTTGTCACAGACGCACCCACTGCAAGTCTGCACAGCTGAGTG--GAAGGAGCTGGT-GCCTGACACTG----TGACCCGAACTCA-----------------AAGGGCCACT----CAGGCAGCACAGGCTGGTTATCAAGGGCGTCACTCCACCAC-C--TCCAAAGCAA-AAGGG-ACGTGTGGAGGACTGTGCTGCATTTTGTCTCAGTATTCATCAGCCTGGAGATAGAA s panTro5.chr7_NW_015973580v1_random 8343 208 - 83720 CAGAGTGCTTGTCACAGACGCACCCACTGCAAGTCTGCACAGCTGAGTG--GAAGGAGCTGGT-GCCTGACACTG----TGACCCAAACTCA-----------------AAGGGCCACT----CAGGCAGCACAGGCTGGTTATCAAGGGCGACACTCCACCAC-C--TCCAAAGCAA-AAGGG-ACGTGTGGAGGACTGTGCTGCATTTTGTCTCAGTATTCATCAGCCTGGAGATAGAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524218 208 + 162613886 CAGAGTGCTTGTCACAGACGCACCCACTGCAAGTCTGCACAGCTGAGTG--GAAGGAGCTGGT-GCCTGACACTG----TGACCCGAACTCA-----------------AAGGGCCACT----CAGGCAGCACAGGCTGGTTATCAAGGGCGTCACTCCACCAC-C--TCCAAAGCAA-AAGGG-ACGTGTGGAGGACTGTGCTGCATTTTGTCTCAGTATTCATCAGCCTGGAGATAGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94656 208 - 432965 CAGAATGCTTGTCACAGACGCACCTACCGCAAGTCTGCACAGCTGAGTG--GAAGGAGCTGGT-GCCTGACACTG----TGATCCGAACTCA-----------------AAGGGCCACT----CAGGCAGCACAGGCTGGTTATCAAGGGCGTCACTCCACCAC-C--TCCAAAGCAA-AAGGG-ACGTGTGGAGGACTGTGCTGCATTTTGTCTCAGTATTCATCAGCCTGGAGATAGAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 153938 208 + 85365473 CAGAATGCTTGTCACAGATGCACCCACTGCAAGTCTGCACAGCTGAGTG--GAAGGAGCTGGT-GCCTGACACTG----TGACCCAAACTCA-----------------AAGGGCCACT----CAGGCAGCACAGGGTGGTTATTAAGGACGTCACTCCACCGC-C--TCCAAAGCAA-AAGGG-ACGTGTGGAGGACTGTGGTGCATTTTGTCTCAGTATTCAGCAGCCTGGAATTAGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001114 211 + 185818997 CAGAATGCTTGTCACAGACGCACCCACCGTAAGTCTGCGCAGCTGCGTG--GAAGGAGCTGGT-GCCTGACGCTGGCTGTGACCCGACCCCG-----------------AAGGGCCACT----CAGGCAGCACAGGCTGGTTATTAAGG-CATCACGCCACCGC-C--CCCAAAGCAA-AAGGG-ATGTCTGCAGGACTGTGGTGCTTTTTGTCTCAGTATTCATCAGCCTGGAAATAGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617086 211 + 192294377 CAGAATGCTTGTCACAGACGCACCCACCGTAAGTCTGCGCAGCTGCGTG--GAAGGAGCTGGT-GCCTGACGCTGGCTGTGACCCGACCCCG-----------------AAGGACCACT----CAGGCAGCACAGGCTGGTTATTAAGG-CATCACGCCACCGC-C--CCCAAAGCAA-AAGGG-ATGTCTGCAGGACTGTGGTGCTTTTTGTCTCAGTATTCATCAGCCTGGAAATAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4383783 211 - 9440265 CAGAATGCTTGTCACAGACGCACCCACCGTAAGTCTGCGCAGCTGCGTG--GAAGGAGCTGGT-GCCTGACGCTGGCTGTGACCCGACCCCG-----------------AAGGGCCACT----CAGGCAGCACAGGCTGGTTATTAAGG-CATCACGCCACCGC-C--CCCAAAGCAA-AAGGG-ATGTCTGCAGGACCGTGGTGCTTTTTGTCTCAGTATTCATCAGCCTGGAAATAGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972234 211 - 21915920 CAGAATGCTTGTCGCAGACGCACCCACCGCAAGTCTGCGCAGCTGCGTG--GAAGGAGCTGGT-GCCTGACGCTGGCTGTGAACCGACCCCG-----------------AAGGGCCACT----CAGGCAGCACAGGCTGGTTATTAAGG-CATCACGTCACCGC-C--CCCAAAGCAA-AAGGG-ATGTCTGCAGGACTGTGGTGCTTTTTGTCTCAGTATTCATTAGCCTGGAAATAGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 108003 209 - 21531802 CAGAATGCTTGTCACAGACGCACCCACCGCAAGTCTGCGCGGCGGCGTG--GAAGGGGCTGGT-GCCTGA--CTGGCTGTGACCCGACCCCG-----------------AAGGGCCACT----CAGGCAGCACAGGTTGGTTATTGTGG-CATCACGCCACCGC-C--CCCAAAGCAA-AAGGG-ATGTCTGCAGGACGGTGGTGCTTTTTGTCTCAGTATTCATCAGCCTGGATATAGAA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 298257 211 + 6586416 CAGAATGCTTGTCACAGACGCACCCACCGCAAGTCTGCGCAGCTGCATG--GAAGGAGCTGGT-GCCTGATGCTGGCTATGACCCAACCCTG-----------------AAGGGCCACT----CAGGCAGCACAGGCTGGTTATTGCGG-CATCACGCCACCGC-C--CCCAAAGCAA-AACGG-ATGTCTGCAGGACTGTGGTGCTTTTTGTCTCAGTATTCATCAGCCTGGAAATAGAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27072 229 + 138751 CAGAACGCTGGTCACAGACGCACCCGCTGCAAGTCTGCAGGGCTGA--G--GAAGAAGCTGGC-GCCTGACACTGACTGTGACCCAACCCCAACTGTGACCCAACCCCGAAGGGCCACT----TGGGCAGCACAGGCTGGCTATTAAGGGCATCATTCCCCCCCACCACCCAAAGCCA-AAGGG-ATGTATGCAGGACTGGGGTGCA-TTTGTCTCAGTATTCATCAGCCTGGAAATTGAA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 506167 211 - 2125214 CAGAATGCTGGTCACAGATGCACTCACTGCAAGTCTGCAGGGCTGA--G--GAAGAAGCTGGC-GCCTGACACTGACTGTGACCTGACCCCA-----------------AAGGGCCACC----TGGCCAGCACAGGCTGGTTATTAAGGGCATCACTCCCTCCC-CCACCCAAAGCCA-AAGGG-GTGTGTTTAGGACTGGGGTGCA-TTTGTCTCAGTATTCATCAGCCTGGAAATCAAA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2236623 189 - 8137123 TAGAATGTCTGATAT-GACACATGCACTG-AAGCACACACA-CTGCATGATGAAGGGACTGGTGGTCTGGTACTGACTGTTACCTGGACATG--------------------------------------CCTGATGTGGTTATTAAGGAGAATGC-------C-C--TCTAAAGAGA-AAGGGAAGGTGTACAGGACTGTGGTGGGTTTAGTCTCAGTACTCACTAATCTAGAAATGGAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61029973 201 - 77573801 ATGAAGACTTAGAATATGCACATGCTCTGTGAGTCTGCGTGGCTGAGGT--GCAGGGGCTTGTGGTCTGACTCTGGCCATGTCCAGAC---------------------AGGCCTAACTGCTGTGGGCAGC----GCTGGGTACCAAAG-----AAGTTGGCTC-C--TCCAGAGGGAGGAGGA-ACGTGTACAGGGCTGTGGT----TCTGTCTTAGCATTCCCGAGTCTAGACATGGGA i canFam3.chr6 C 0 I 197 e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=8281.000000 s hg38.chr7_KI270899v1_alt 133925 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 8551 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524426 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94864 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154146 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001325 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617297 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4383994 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972445 1 - 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 108212 1 - 21531802 A i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 298468 1 + 6586416 A i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27301 1 + 138751 A i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 506378 1 - 2125214 A i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2236812 1 - 8137123 A i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=10505.000000 s hg38.chr7_KI270899v1_alt 133926 2 + 190869 TG s panTro5.chr7_NW_015973580v1_random 8552 2 - 83720 TG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524427 2 + 162613886 TG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94865 2 - 432965 TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154147 2 + 85365473 TG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001326 2 + 185818997 TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617298 2 + 192294377 TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4383995 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108213 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 298469 2 + 6586416 TG i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2236813 2 - 8137123 TG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27302 0 + 138751 C a score=75679.000000 s hg38.chr7_KI270899v1_alt 133928 15 + 190869 TGTTCCTGTCGGGGG s panTro5.chr7_NW_015973580v1_random 8554 15 - 83720 TGTTCCTGTCGGGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524429 15 + 162613886 TGTTCCTGTCGGGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94867 15 - 432965 TGTTCCTGTCGGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154149 15 + 85365473 TGTTGCTGTCGGGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001328 15 + 185818997 TGTTCCTGTCAGGGG i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33617300 15 + 192294377 TGTTCCTGTCAGGGG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4383997 15 - 9440265 TGTTCCTGTCAGGGG i macNem1.NW_012019910v1 C 0 I 1 s chlSab2.chr28 108215 15 - 21531802 TGTTCCTGTCGGGGG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 298471 14 + 6586416 TGTTCCTGTCGGGG- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27302 15 + 138751 TGTTTCTGTCGGGGG i calJac3.chrUn_GL286444 C 0 C 0 s otoGar3.GL873611 2236815 15 - 8137123 TGTTCATGTGGTGGG i otoGar3.GL873611 C 0 I 4 e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=501.000000 s hg38.chr7_KI270899v1_alt 133943 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 8569 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524444 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94882 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154164 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 27317 1 + 138751 T i calJac3.chrUn_GL286444 C 0 C 0 s otoGar3.GL873611 2236834 1 - 8137123 C i otoGar3.GL873611 I 4 C 0 e colAng1.NW_012117710v1 298485 0 + 6586416 C e canFam3.chr6 61030174 197 - 77573801 I e chlSab2.chr28 108230 0 - 21531802 C e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e macNem1.NW_012019910v1 4384012 1 - 9440265 I e macFas5.chr3 33617315 1 + 192294377 I e rheMac8.chr3 34001343 1 + 185818997 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=5159.000000 s hg38.chr7_KI270899v1_alt 133944 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 8570 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524445 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94883 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154165 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001344 1 + 185818997 G i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33617316 1 + 192294377 G i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4384013 1 - 9440265 G i macNem1.NW_012019910v1 I 1 C 0 s chlSab2.chr28 108230 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 298485 1 + 6586416 G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27318 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s otoGar3.GL873611 2236835 1 - 8137123 A i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=125611.000000 s hg38.chr7_KI270899v1_alt 133945 33 + 190869 AGCCTTCCCTGTTGGACGTGGGTTTCTGAGGTT s panTro5.chr7_NW_015973580v1_random 8571 33 - 83720 AGCCTTCCCTGTTGGACGTGGGTTTCTGAGGTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524446 33 + 162613886 AGCCTTCCCTGTTGGACGTGGGTTTCTGAGGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94884 33 - 432965 AGCCTTCCCCGTTGGACGTGGGTTTCTGAGGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154166 33 + 85365473 AGCCTTCCCCGTTGGAAGTGGGTTTCTGAGGTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001345 33 + 185818997 AGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617317 33 + 192294377 AGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384014 33 - 9440265 AGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGTT i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108231 33 - 21531802 GGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGCT i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27319 33 + 138751 AGCCTTGCCCACTGGAAGTGGGTTTCCGAAGTT i calJac3.chrUn_GL286444 C 0 T 50 s otoGar3.GL873611 2236836 33 - 8137123 ACCCTCATAAGCTAGAAATGGATTTCTGAAGCT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=8595.000000 s hg38.chr7_KI270899v1_alt 133978 2 + 190869 GT s panTro5.chr7_NW_015973580v1_random 8604 2 - 83720 GT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524479 2 + 162613886 GT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94917 2 - 432965 GT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154199 2 + 85365473 GT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001378 2 + 185818997 GT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617350 2 + 192294377 GT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384047 2 - 9440265 GT i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108264 2 - 21531802 GT i chlSab2.chr28 C 0 C 0 s otoGar3.GL873611 2236869 2 - 8137123 GT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=32234.000000 s hg38.chr7_KI270899v1_alt 133980 14 + 190869 GTTCCCATTGGGGG s panTro5.chr7_NW_015973580v1_random 8606 14 - 83720 GTTCCCATTGGGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524481 14 + 162613886 GTTCCCATTGGGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94919 14 - 432965 GTTCCCATTGGGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154201 14 + 85365473 GTCGCTGTCCCGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001380 14 + 185818997 GTTCCTGTCGGGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617352 14 + 192294377 GTTCCTGTCGGGGG i macFas5.chr3 C 0 T 68 s macNem1.NW_012019910v1 4384049 14 - 9440265 GTTCCTGTCGGGGG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108266 14 - 21531802 GATCCTGTCGGGGG i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=-26.000000 s hg38.chr7_KI270899v1_alt 133994 2 + 190869 TC s panTro5.chr7_NW_015973580v1_random 8620 2 - 83720 TC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524495 2 + 162613886 TC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94933 2 - 432965 TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154215 2 + 85365473 CA i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e chlSab2.chr28 108280 0 - 21531802 C e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e macNem1.NW_012019910v1 4384063 0 - 9440265 C e macFas5.chr3 33617366 68 + 192294377 T e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=48841.000000 s hg38.chr7_KI270899v1_alt 133996 32 + 190869 AGCCTTCCATGTTGGAAGTGGGTTTCTGAAGT s panTro5.chr7_NW_015973580v1_random 8622 32 - 83720 AGCCTTCCATGTTGGAAGTGGGTTTCTGAGGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524497 32 + 162613886 AGCCTTCCATGTTGGAAGTGGGTTTCTGAGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94935 32 - 432965 AGCCTTCCATGTTGGAAGTGGGTTTCTGAGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154217 32 + 85365473 AGTCTTTCCCGTTGGAAGTGGGTTTCTGAGGT i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4384063 32 - 9440265 AGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108280 31 - 21531802 GGCCCTCCCCGTTGGAAGT-GGTGTCTGGGGT i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e macFas5.chr3 33617366 68 + 192294377 T e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=110996.000000 s hg38.chr7_KI270899v1_alt 134028 53 + 190869 TGTGTTCCCGTT--GGGGGTGAGCCTTCCATGTTGGAAGTGGGTTTCTGAGGTTG s panTro5.chr7_NW_015973580v1_random 8654 53 - 83720 TGTGTTCCCGTT--GGGGGTGAGCCTTCCATGTTGGAAGTGGGTTTCTGAGGTTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524529 53 + 162613886 TGTGTTCCCGTT--GGGGGTGAGCCTTCCATGTTGGAAGTGGGTTTCTGAGGTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 94967 53 - 432965 TGTGTTCCCGTT--GGGGGTGAGCCTTCCATGTTGGACGTGGGTTTCTGAGGTTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154249 53 + 85365473 TGTGTTGCTGTC--GGGAGTGAGCCTTCCCCATTGGAAGTGGGTTTCTGAGGTTG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617298 53 + 192294377 TGTGTTCCTGTC--AGGGGGGAGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGTTG i macFas5.chr3 T 68 C 0 s macNem1.NW_012019910v1 4384095 55 - 9440265 TGTGTTTCTGTCGGGGGGGGGAGCCCTCCCCGTTAGAAGTGGGTTTCTGAGGTTG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108311 53 - 21531802 TGTGTTGCTGTC--GGGGAGGAGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGCTG i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=30698.000000 s hg38.chr7_KI270899v1_alt 134081 10 + 190869 TGTTCCTGTC s panTro5.chr7_NW_015973580v1_random 8707 10 - 83720 TGTTCCTGTC i panTro5.chr7_NW_015973580v1_random C 0 T 153 s panPan2.chr7 524582 10 + 162613886 TGTTCCTGTC i panPan2.chr7 C 0 T 102 s gorGor5.CYUI01015914v1 95020 10 - 432965 TGTTCCTGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154302 10 + 85365473 TGTCGCTGTC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617351 10 + 192294377 TGTTCCTGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384150 10 - 9440265 TGTTCCTGTC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108364 10 - 21531802 TGTTCCTGTC i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27302 10 + 138751 TGTTTCTGTC i calJac3.chrUn_GL286444 T 50 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=13352.000000 s hg38.chr7_KI270899v1_alt 134091 4 + 190869 GGGG s panTro5.chr7_NW_015973580v1_random 8564 4 - 83720 GGGG i panTro5.chr7_NW_015973580v1_random T 153 C 0 s panPan2.chr7 524490 4 + 162613886 GGGG i panPan2.chr7 T 102 C 0 s gorGor5.CYUI01015914v1 95030 4 - 432965 GGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154312 4 + 85365473 GGGG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617361 4 + 192294377 GGGG i macFas5.chr3 C 0 T 51 s macNem1.NW_012019910v1 4384160 4 - 9440265 AGGG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108374 4 - 21531802 GGGG i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27312 4 + 138751 GGGG i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=3330.000000 s hg38.chr7_KI270899v1_alt 134095 3 + 190869 GTG s panTro5.chr7_NW_015973580v1_random 8568 3 - 83720 GCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524494 3 + 162613886 GTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95034 3 - 432965 GTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154316 3 + 85365473 GTG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617314 3 + 192294377 GGG i macFas5.chr3 T 51 C 0 s macNem1.NW_012019910v1 4384164 3 - 9440265 GGG i macNem1.NW_012019910v1 C 0 T 104 s chlSab2.chr28 108378 2 - 21531802 -GG i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27316 3 + 138751 GTG i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=24506.000000 s hg38.chr7_KI270899v1_alt 134098 10 + 190869 AGCCTTCCAT s panTro5.chr7_NW_015973580v1_random 8571 10 - 83720 AGCCTTCCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524497 10 + 162613886 AGCCTTCCAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95037 10 - 432965 AGCCTTCCAT i gorGor5.CYUI01015914v1 C 0 I 509 s nomLeu3.chr20 154319 10 + 85365473 AGCCTTCCCC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617317 10 + 192294377 AGCCCTCCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384063 10 - 9440265 AGCCCTCCCC i macNem1.NW_012019910v1 T 104 C 0 s chlSab2.chr28 108380 10 - 21531802 AGCCCTCCCC i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27319 10 + 138751 AGCCTTGCCC i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=57382.000000 s hg38.chr7_KI270899v1_alt 134108 22 + 190869 GTTGGAAGTGGGTTTCTGAAGT s panTro5.chr7_NW_015973580v1_random 8581 22 - 83720 GTTGGACGTGGGTTTCTGAGGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524507 22 + 162613886 GTTGGAAGTGGGTTTCTGAGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95556 22 - 432965 GTTGGAAGTGGGTTTCTGAGGT i gorGor5.CYUI01015914v1 I 509 C 0 s nomLeu3.chr20 154329 22 + 85365473 GTTGGAAGTGGGTTTCTGAGGT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617327 22 + 192294377 GTTGGAAGTGGGTGTCTGGGGT i macFas5.chr3 C 0 T 51 s macNem1.NW_012019910v1 4384073 22 - 9440265 GTTGGAAGTGGGTGTCTGGGGC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108390 21 - 21531802 GTTGGAAGT-GGTGTCTGGGGC i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27329 22 + 138751 ACTGGAAGTGGGTTTCCGAAGT i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=3276.000000 s hg38.chr7_KI270899v1_alt 134130 1 + 190869 T s panTro5.chr7_NW_015973580v1_random 8603 1 - 83720 T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524529 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95578 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154351 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617298 1 + 192294377 T i macFas5.chr3 T 51 C 0 s macNem1.NW_012019910v1 4384095 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108411 1 - 21531802 T i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27351 1 + 138751 T i calJac3.chrUn_GL286444 C 0 T 50 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=105097.000000 s hg38.chr7_KI270899v1_alt 134131 50 + 190869 GTGTTCCCGTT--GGGGGTGAGCCTTCCATGTTGGAAGTGGGTTTCTGAGGT s panTro5.chr7_NW_015973580v1_random 8604 50 - 83720 GTGTTCCCATT--GGGGGTCAGCCTTCCATGTTGGAAGTGGGTTTCTGAGGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524530 50 + 162613886 GTGTTCCCGTT--GGGGGTGAGCCTTCCATGTTGGAAGTGGGTTTCTGAGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95579 50 - 432965 GTGTTCCCGTT--GGGGGTGAGCCTTCCATGTTGGAAGTGGGTTTCTGAGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154352 50 + 85365473 GTGTTGCTGTT--GGGGGTGAGCCTTCCCCGTTGGAAGTGGGTTTCTGAGGT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617299 50 + 192294377 GTGTTCCTGTC--AGGGGGGAGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGT i macFas5.chr3 C 0 T 51 s macNem1.NW_012019910v1 4384096 52 - 9440265 GTGTTTCTGTCGGGGGGGGGAGCCCTCCCCGTTAGAAGTGGGTTTCTGAGGT i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108412 50 - 21531802 GTGTTCCTGTC--GGGGGGAAGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGC i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=5348.000000 s hg38.chr7_KI270899v1_alt 134181 2 + 190869 TG s panTro5.chr7_NW_015973580v1_random 8654 2 - 83720 TG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524580 2 + 162613886 TG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95629 2 - 432965 TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154402 2 + 85365473 TG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617298 2 + 192294377 TG i macFas5.chr3 T 51 C 0 s macNem1.NW_012019910v1 4384148 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108462 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=6876.000000 s hg38.chr7_KI270899v1_alt 134183 2 + 190869 TG s panTro5.chr7_NW_015973580v1_random 8656 2 - 83720 TG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524582 2 + 162613886 TG i panPan2.chr7 C 0 I 51 s gorGor5.CYUI01015914v1 95631 2 - 432965 TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154404 2 + 85365473 TG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617300 2 + 192294377 TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384150 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108464 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27302 2 + 138751 TG i calJac3.chrUn_GL286444 T 50 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=21256.000000 s hg38.chr7_KI270899v1_alt 134185 8 + 190869 TTCCTGTC s panTro5.chr7_NW_015973580v1_random 8658 8 - 83720 TTCCCGTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524635 8 + 162613886 TTCCTGTC i panPan2.chr7 I 51 C 0 s gorGor5.CYUI01015914v1 95633 8 - 432965 TTCCCGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154406 8 + 85365473 TTGCTGTC i nomLeu3.chr20 C 0 T 255 s macFas5.chr3 33617302 8 + 192294377 TTCCTGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384152 8 - 9440265 TTCCTGTC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108466 8 - 21531802 TTCCTGTC i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27304 8 + 138751 TTTCTGTC i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=11509.000000 s hg38.chr7_KI270899v1_alt 134193 4 + 190869 GGGG s panTro5.chr7_NW_015973580v1_random 8666 4 - 83720 GGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524643 4 + 162613886 GGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95641 4 - 432965 GAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154159 4 + 85365473 GGGG i nomLeu3.chr20 T 255 C 0 s macFas5.chr3 33617310 4 + 192294377 AGGG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4384160 4 - 9440265 AGGG i macNem1.NW_012019910v1 C 0 I 1 s chlSab2.chr28 108474 4 - 21531802 GGGG i chlSab2.chr28 C 0 T 248 s calJac3.chrUn_GL286444 27312 4 + 138751 GGGG i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=-1605.000000 s hg38.chr7_KI270899v1_alt 134197 2 + 190869 GT s panTro5.chr7_NW_015973580v1_random 8670 2 - 83720 GT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524647 2 + 162613886 GC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95645 2 - 432965 GT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154163 2 + 85365473 GT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617315 1 + 192294377 G- i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4384165 1 - 9440265 G- i macNem1.NW_012019910v1 I 1 C 0 s calJac3.chrUn_GL286444 27316 2 + 138751 GT i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e chlSab2.chr28 108478 248 - 21531802 T e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=75843.000000 s hg38.chr7_KI270899v1_alt 134199 27 + 190869 GAGCCTTCCCCGTTGGAGGTGGGTTTC s panTro5.chr7_NW_015973580v1_random 8672 27 - 83720 GAGCCTTCCATGTTGGAAGTGGGTTTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524649 27 + 162613886 GAGCCTTCCCTGTTGGAAGTGGGTTTC i panPan2.chr7 C 0 T 102 s gorGor5.CYUI01015914v1 95647 27 - 432965 GAGCCTTCCATGTTGGAAGTGGGTTTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154165 27 + 85365473 GAGCCTTCCCCGTTGGAAGTGGGTTTC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617316 27 + 192294377 GAGCCCTCCCCGTTGGAAGTGGGTGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384166 27 - 9440265 GAGCCCTCCCCATTGGAAGTGGGTGTC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108230 27 - 21531802 GGGCCCTCCCCGTTGGAAGTGGGTGTC i chlSab2.chr28 T 248 C 0 s calJac3.chrUn_GL286444 27318 27 + 138751 GAGCCTTGCCCACTGGAAGTGGGTTTC i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=17289.000000 s hg38.chr7_KI270899v1_alt 134226 7 + 190869 CGAGGTT s panTro5.chr7_NW_015973580v1_random 8699 7 - 83720 TGAGGTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524574 7 + 162613886 TGAGGTT i panPan2.chr7 T 102 C 0 s gorGor5.CYUI01015914v1 95674 7 - 432965 TGAGGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154192 7 + 85365473 TGAGGTT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617343 7 + 192294377 TGGGGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384193 7 - 9440265 TGGGGCT i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108257 7 - 21531802 TGGGGCT i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 27345 7 + 138751 CGAAGTT i calJac3.chrUn_GL286444 C 0 T 48 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=8148.000000 s hg38.chr7_KI270899v1_alt 134233 3 + 190869 GTG s panTro5.chr7_NW_015973580v1_random 8706 3 - 83720 GTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524581 3 + 162613886 GTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95681 3 - 432965 GTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154199 3 + 85365473 GTG i nomLeu3.chr20 C 0 I 204 s macFas5.chr3 33617350 3 + 192294377 GTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384200 3 - 9440265 GTG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108264 3 - 21531802 GTG i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 48 + 138751 T a score=1050.000000 s hg38.chr7_KI270899v1_alt 134236 1 + 190869 T s panTro5.chr7_NW_015973580v1_random 8709 1 - 83720 T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524584 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95684 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154406 1 + 85365473 T i nomLeu3.chr20 I 204 C 0 s macFas5.chr3 33617353 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384203 1 - 9440265 T i macNem1.NW_012019910v1 C 0 I 93 s chlSab2.chr28 108267 1 - 21531802 A i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 48 + 138751 T a score=25977.000000 s hg38.chr7_KI270899v1_alt 134237 11 + 190869 TCCTGTCGGGG s panTro5.chr7_NW_015973580v1_random 8710 11 - 83720 TCCTGTCAGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524585 11 + 162613886 TCCTGTCGGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95685 11 - 432965 TCCTGTCGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154407 11 + 85365473 TGCTGTCGGGG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617354 11 + 192294377 TCCTGTCGGGG i macFas5.chr3 C 0 T 67 s macNem1.NW_012019910v1 4384297 11 - 9440265 TCCTGTCGGGG i macNem1.NW_012019910v1 I 93 C 0 s chlSab2.chr28 108268 11 - 21531802 TCCTGTCGGGG i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 48 + 138751 T a score=26987.000000 s hg38.chr7_KI270899v1_alt 134248 18 + 190869 ATGAGCCTTCCCTATTGG s panTro5.chr7_NW_015973580v1_random 8721 18 - 83720 GTGAGCCTTCCCTATTGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524596 18 + 162613886 GTGAGCCTTCCCCGTTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95696 18 - 432965 ATGAGCCTTCCCCGTTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154418 18 + 85365473 GTGAGCCTTCCCCATTGG i nomLeu3.chr20 C 0 T 234 s macNem1.NW_012019910v1 4384308 18 - 9440265 GGGAGCCCTCCCCGGTGG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108279 16 - 21531802 --GGGCCCTCCCCGTTGG i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e macFas5.chr3 33617365 67 + 192294377 T e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 48 + 138751 T a score=-2266.000000 s hg38.chr7_KI270899v1_alt 134266 2 + 190869 -AC s panTro5.chr7_NW_015973580v1_random 8739 2 - 83720 -AC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524614 2 + 162613886 -AA i panPan2.chr7 C 0 T 32 s gorGor5.CYUI01015914v1 95714 2 - 432965 -AC i gorGor5.CYUI01015914v1 C 0 C 0 s macNem1.NW_012019910v1 4384326 2 - 9440265 AA- i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108295 2 - 21531802 AA- i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e macFas5.chr3 33617365 67 + 192294377 T e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 48 + 138751 T e nomLeu3.chr20 154436 234 + 85365473 T a score=9889.000000 s hg38.chr7_KI270899v1_alt 134268 17 + 190869 ATATGGGTTTCTGAGGT s panTro5.chr7_NW_015973580v1_random 8741 15 - 83720 --ATGGGTTTCTGAGGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 95716 15 - 432965 --ATGGGTTTCTGAGGT i gorGor5.CYUI01015914v1 C 0 C 0 s macNem1.NW_012019910v1 4384328 15 - 9440265 --GTGGGTTTCTGAGGT i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108297 14 - 21531802 --GT-GGTGTCTGGGGT i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e macFas5.chr3 33617365 67 + 192294377 T e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 48 + 138751 T e nomLeu3.chr20 154436 234 + 85365473 T e panPan2.chr7 524616 32 + 162613886 T a score=4605.000000 s hg38.chr7_KI270899v1_alt 134285 4 + 190869 TGTC s panTro5.chr7_NW_015973580v1_random 8756 4 - 83720 TGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 95731 4 - 432965 TGTG i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33617298 4 + 192294377 TGTG i macFas5.chr3 T 67 C 0 s macNem1.NW_012019910v1 4384343 4 - 9440265 TGTG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108311 4 - 21531802 TGTG i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e manLeu1.NW_012101810v1 131663 8912 - 2515279 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 48 + 138751 T e nomLeu3.chr20 154436 234 + 85365473 T e panPan2.chr7 524616 32 + 162613886 T a score=28404.000000 s hg38.chr7_KI270899v1_alt 134289 9 + 190869 TTCCTGTCG s panTro5.chr7_NW_015973580v1_random 8760 9 - 83720 TTCCTGTCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524584 9 + 162613886 TTCCTGTCG i panPan2.chr7 T 32 C 0 s gorGor5.CYUI01015914v1 95735 9 - 432965 TTCCTGTCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154202 9 + 85365473 TCGCTGTCC i nomLeu3.chr20 T 234 C 0 s macFas5.chr3 33617302 9 + 192294377 TTCCTGTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384347 9 - 9440265 TTTCTGTTG i macNem1.NW_012019910v1 C 0 T 152 s chlSab2.chr28 108315 9 - 21531802 TTGCTGTCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140575 9 - 2515279 TTCCTGTCG i manLeu1.NW_012101810v1 I 8912 C 0 s calJac3.chrUn_GL286444 27304 9 + 138751 TTTCTGTCG i calJac3.chrUn_GL286444 T 48 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=128735.000000 s hg38.chr7_KI270899v1_alt 134298 39 + 190869 GGGGTGAGCCTTCCCCGTTGGAAGTGGGTTTCTGAGGTT s panTro5.chr7_NW_015973580v1_random 8769 39 - 83720 GGGGCGAGCCTTCCCTGTTGGAAGTGGGTTTCTGAAGTT i panTro5.chr7_NW_015973580v1_random C 0 T 255 s panPan2.chr7 524593 39 + 162613886 GGGGTGAGCCTTCCCCGTTGGAAGTGGGTTTCTGAGGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95744 39 - 432965 GGGATGAGCCTTCCCCATTGGACGTGGGTTTCTGAGGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154211 39 + 85365473 CGGGCAAGTCTTTCCCGTTGGAAGTGGGTTTCTGAGGTT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617311 39 + 192294377 GGGGGGAGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384204 39 - 9440265 GGGGGGAGCCCTCCCCATTGGAAGTGGGTGTCTGGGGCT i macNem1.NW_012019910v1 T 152 C 0 s chlSab2.chr28 108324 39 - 21531802 GGGAGGAGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140584 39 - 2515279 GGGGGGAGCCCTCCCCAGTGGAAGTGGGTGTCTGGGGTT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27313 39 + 138751 GGGGTGAGCCTTGCCCACTGGAAGTGGGTTTCCGAAGTT i calJac3.chrUn_GL286444 C 0 T 50 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=3600.000000 s hg38.chr7_KI270899v1_alt 134337 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 8553 1 - 83720 G i panTro5.chr7_NW_015973580v1_random T 255 C 0 s panPan2.chr7 524632 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95783 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154250 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617350 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384243 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108363 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140623 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=56734.000000 s hg38.chr7_KI270899v1_alt 134338 14 + 190869 TGTTCCTGTCGGGG s panTro5.chr7_NW_015973580v1_random 8554 14 - 83720 TGTTCCTGTCGGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524633 14 + 162613886 TGTTCCTGTCGGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95784 14 - 432965 TGTTCCTGTCGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154251 14 + 85365473 TGTTGCTGTCGGGA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617351 14 + 192294377 TGTTCCTGTCGGGG i macFas5.chr3 C 0 T 51 s macNem1.NW_012019910v1 4384244 14 - 9440265 TGTTCCTGTCGGGG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108364 14 - 21531802 TGTTCCTGTCGGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140624 14 - 2515279 TGTTCCTGTCGGGG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27302 14 + 138751 TGTTTCTGTCGGGG i calJac3.chrUn_GL286444 T 50 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=92956.000000 s hg38.chr7_KI270899v1_alt 134352 32 + 190869 GCG---AGCCTTCCCCATTGGAAGTGTGTTTCTGA s panTro5.chr7_NW_015973580v1_random 8568 32 - 83720 GCG---AGCCTTCCCTGTTGGACGTGGGTTTCTGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524647 32 + 162613886 GCG---AGCCTTCCCTGTTGGAAGTGGGTTTCTGA i panPan2.chr7 C 0 T 102 s gorGor5.CYUI01015914v1 95798 32 - 432965 ATG---AGCCTTCCCCATTGGACGTGGGTTTCTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154265 32 + 85365473 GTG---AGCCTTCCCCATTGGAAGTGGGTTTCTGA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617314 32 + 192294377 GGG---AGCCCTCCCCGTTGGAAGTGGGTGTCTGG i macFas5.chr3 T 51 C 0 s macNem1.NW_012019910v1 4384258 31 - 9440265 -GG---AGCCCTCCCCGTTGGAAGTGGGTGTCTGG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108378 30 - 21531802 -GG---AGCCCTCCCCGTTGGAAGT-GGTGTCTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140638 34 - 2515279 -GGGGAAGCCCTCCCCAGTGGAAGTGGGTTTCTGA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27316 32 + 138751 GTG---AGCCTTGCCCACTGGAAGTGGGTTTCCGA i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=13734.000000 s hg38.chr7_KI270899v1_alt 134384 4 + 190869 GATT s panTro5.chr7_NW_015973580v1_random 8600 4 - 83720 GGTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524577 4 + 162613886 GGTT i panPan2.chr7 T 102 C 0 s gorGor5.CYUI01015914v1 95830 4 - 432965 GGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154297 4 + 85365473 GGTT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617346 4 + 192294377 GGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384289 4 - 9440265 GGTT i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108408 4 - 21531802 GGCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140672 4 - 2515279 GGTT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27348 4 + 138751 AGTT i calJac3.chrUn_GL286444 C 0 T 50 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=3600.000000 s hg38.chr7_KI270899v1_alt 134388 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 8604 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524581 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95834 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154301 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617350 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384293 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108412 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140676 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=46822.000000 s hg38.chr7_KI270899v1_alt 134389 14 + 190869 TGTTCCTGT-CGGGG s panTro5.chr7_NW_015973580v1_random 8605 14 - 83720 TGTTCCCAT-TGGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524582 14 + 162613886 TGTTCCTGT-CGGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95835 14 - 432965 TGTTCCTGT-CGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154302 14 + 85365473 TGTCGCTGT-CGGGG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617351 14 + 192294377 TGTTCCTGT-CGGGG i macFas5.chr3 C 0 T 51 s macNem1.NW_012019910v1 4384294 14 - 9440265 TGTTCCTGT-CGGGG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108413 14 - 21531802 TGTTCCTGT-CGGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140677 15 - 2515279 TGTTTCTGTGGGGGG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27302 14 + 138751 TGTTTCTGT-CGGGG i calJac3.chrUn_GL286444 T 50 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=3321.000000 s hg38.chr7_KI270899v1_alt 134403 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 8619 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 I 102 s panPan2.chr7 524596 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95849 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154316 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617314 1 + 192294377 G i macFas5.chr3 T 51 C 0 s macNem1.NW_012019910v1 4384308 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108427 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140692 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27316 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=112208.000000 s hg38.chr7_KI270899v1_alt 134404 34 + 190869 TGAGCCTTCCCCATTGGACGTGGGTTTCTGAGGT s panTro5.chr7_NW_015973580v1_random 8722 34 - 83720 TGAGCCTTCCCTATTGGACATGGGTTTCTGAGGT i panTro5.chr7_NW_015973580v1_random I 102 C 0 s panPan2.chr7 524597 34 + 162613886 TGAGCCTTCCCCGTTGGAAGTGGGTTTCTGAGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95850 34 - 432965 TGAGCCTTCCCCATTGGACGTGGGTTTCTGAGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154317 34 + 85365473 TGAGCCTTCCCCGTTGGAAGTGGGTTTCTGAGGT i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617315 34 + 192294377 GGAGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGT i macFas5.chr3 C 0 T 51 s macNem1.NW_012019910v1 4384309 34 - 9440265 GGAGCCCTCCCCGGTGGAAGTGGGTTTCTGAGGT i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108428 34 - 21531802 GAAGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140693 34 - 2515279 GGAGCCCTCCCCGTTGGAAGTGTGTTTCTGGGGT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27317 34 + 138751 TGAGCCTTGCCCACTGGAAGTGGGTTTCCGAAGT i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=4095.000000 s hg38.chr7_KI270899v1_alt 134438 1 + 190869 T s panTro5.chr7_NW_015973580v1_random 8756 1 - 83720 T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524631 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95884 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154351 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617298 1 + 192294377 T i macFas5.chr3 T 51 C 0 s macNem1.NW_012019910v1 4384343 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108462 1 - 21531802 T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140727 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27351 1 + 138751 T i calJac3.chrUn_GL286444 C 0 T 48 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=8676.000000 s hg38.chr7_KI270899v1_alt 134439 3 + 190869 GTC s panTro5.chr7_NW_015973580v1_random 8757 3 - 83720 GTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524632 3 + 162613886 GTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95885 3 - 432965 GTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154352 3 + 85365473 GTG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617299 3 + 192294377 GTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384344 3 - 9440265 GTG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 108463 3 - 21531802 GTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140728 3 - 2515279 GTG i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C e calJac3.chrUn_GL286444 27352 48 + 138751 T a score=27225.000000 s hg38.chr7_KI270899v1_alt 134442 8 + 190869 TTCCTGTT s panTro5.chr7_NW_015973580v1_random 8760 8 - 83720 TTCCTGTC i panTro5.chr7_NW_015973580v1_random C 0 T 51 s panPan2.chr7 524635 8 + 162613886 TTCCTGTC i panPan2.chr7 C 0 T 51 s gorGor5.CYUI01015914v1 95888 8 - 432965 TTCCTGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154355 8 + 85365473 TTGCTGTT i nomLeu3.chr20 C 0 I 51 s macFas5.chr3 33617302 8 + 192294377 TTCCTGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384347 8 - 9440265 TTTCTGTT i macNem1.NW_012019910v1 C 0 I 1 s chlSab2.chr28 108466 8 - 21531802 TTCCTGTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140731 8 - 2515279 TTTCTGTC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27304 8 + 138751 TTTCTGTC i calJac3.chrUn_GL286444 T 48 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=120904.000000 s hg38.chr7_KI270899v1_alt 134450 39 + 190869 GGGGGTGAGCCTTCCCCATTGGAAGTGGGTTTCTGAGGT s panTro5.chr7_NW_015973580v1_random 8717 39 - 83720 AGGGGTGAGCCTTCCCTATTGGACATGGGTTTCTGAGGT i panTro5.chr7_NW_015973580v1_random T 51 C 0 s panPan2.chr7 524592 39 + 162613886 GGGGGTGAGCCTTCCCCGTTGGAAGTGGGTTTCTGAGGT i panPan2.chr7 T 51 C 0 s gorGor5.CYUI01015914v1 95896 39 - 432965 GGGGGCGAGCCTTCCCTGTTGGAAGTGGGTTTCTGAGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154414 39 + 85365473 GGGGGTGAGCCTTCCCCATTGGAAGTGGGTTTCTGAGGC i nomLeu3.chr20 I 51 C 0 s macFas5.chr3 33617310 39 + 192294377 AGGGGGGAGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384356 39 - 9440265 GGGGGGGAGCCCTCCCCGTTGGAAGTGGGTTTCTGGGGT i macNem1.NW_012019910v1 I 1 C 0 s chlSab2.chr28 108474 36 - 21531802 -GGGGGG-GCCCTCCCCGTTGGAAGT-GGTGTCTGGGGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140739 38 - 2515279 -GGGGGGAACCCTCTCCGGTGGCAGTGGGTTTCTGGGGT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27312 39 + 138751 GGGGGTGAGCCTTGCCCACTGGAAGTGGGTTTCCGAAGT i calJac3.chrUn_GL286444 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e cerAty1.NW_012002954v1 16972446 0 - 21915920 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506379 0 - 2125214 C a score=6006.000000 s hg38.chr7_KI270899v1_alt 134489 1 + 190869 T s panTro5.chr7_NW_015973580v1_random 8756 1 - 83720 T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524631 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95935 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154453 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617349 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384395 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972446 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 108510 1 - 21531802 T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140777 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27351 1 + 138751 T i calJac3.chrUn_GL286444 C 0 T 50 s cebCap1.NW_016107703v1 506379 1 - 2125214 T i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=5500.000000 s hg38.chr7_KI270899v1_alt 134490 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 8757 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524632 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95936 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154454 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617350 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384396 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972447 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 108511 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140778 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 C 0 s cebCap1.NW_016107703v1 506380 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e calJac3.chrUn_GL286444 27352 50 + 138751 T a score=47636.000000 s hg38.chr7_KI270899v1_alt 134491 15 + 190869 TGTTCCTGTC-GGGG-G s panTro5.chr7_NW_015973580v1_random 8758 15 - 83720 TGTTCCTGTC-GGGG-G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524633 15 + 162613886 TGTTCCTGTC-GGGG-G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95937 15 - 432965 TGTTCCTGTC-GGGG-G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154455 15 + 85365473 TGTTGCTGTC-GGGA-G i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33617351 15 + 192294377 TGTTCCTGTC-GGGGG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384397 14 - 9440265 TGTTCCTGTT-GGGG-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972448 15 - 21915920 TGTTCCTTTC-AGGGG- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 108512 15 - 21531802 TGTTGCTGTCGGGGG-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140779 14 - 2515279 TGTTCCTGTT-GGGG-- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27302 15 + 138751 TGTTTCTGTC-GGGG-G i calJac3.chrUn_GL286444 T 50 C 0 s cebCap1.NW_016107703v1 506381 15 - 2125214 TGTTTCTGTC-AGGG-G i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=5020.000000 s hg38.chr7_KI270899v1_alt 134506 2 + 190869 CG s panTro5.chr7_NW_015973580v1_random 8773 2 - 83720 CG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524648 2 + 162613886 CG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95952 2 - 432965 CG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154470 2 + 85365473 TG i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4384411 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972463 1 - 21915920 -G i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 108527 2 - 21531802 GG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140793 2 - 2515279 TG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 27317 2 + 138751 TG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 506396 2 - 2125214 TG i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 298486 0 + 6586416 C e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e macFas5.chr3 33617366 0 + 192294377 C e rheMac8.chr3 34001394 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=245961.000000 s hg38.chr7_KI270899v1_alt 134508 33 + 190869 AGCCTTCCCTGTTGGAAGTGGGTTTCTGAAGTT s panTro5.chr7_NW_015973580v1_random 8775 33 - 83720 AGCCTTCCCTGTTGGAAGTGGGTTTCTGAAGTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524650 33 + 162613886 AGCCTTCCCTGTTGGAAGTGGGTTTCTGAAGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95954 33 - 432965 AGCCTTCCCTGTTGGAAGTGGGTTTCTGAAGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154472 33 + 85365473 AGCCTTCCCCGTTGGAAGTGGGTTTCTGAAGTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001394 33 + 185818997 AGCCCTCCCCGTTGGAAGTGGGTTTCTGGGGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617366 33 + 192294377 AGCCCTCCCCGTTGGAAGTGGGTTTCTGGGGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384413 33 - 9440265 AGCCCTCCCCGTTGGAAGTGGGTTTCTGGGGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972465 33 - 21915920 AGCCCTCCCCGTTGGAAGCGGGTTTCTGGGGTT i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 108529 33 - 21531802 AGCCCTCCCCGTTGGAAGTGGGTGTCTGGGGTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140795 33 - 2515279 AGCCCTCCCCGTTGGAAGTGGGTTTCTGGGGTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 298486 33 + 6586416 AGCCTTCCCCGTTGGAAGTGGGTTTCTGGGGTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27319 33 + 138751 AGCCTTGCCCACTGGAAGTGGGTTTCCGAAGTT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 506398 33 - 2125214 AGCCTTGCCCACTGGAAGTGGGTTTCCGAAGTT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2236871 0 - 8137123 C e canFam3.chr6 61030174 197 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=2171062.000000 s hg38.chr7_KI270899v1_alt 134541 292 + 190869 TGCTGTTGGAAGCA-GAGCTTGCGTCCATGCTCACAGCAGCACCAGCCGCAATCAGTCACTGAGGTCTGTGCTGGGTGTGGAAGATGAGAGTGGTACCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATTAGCGG-AGACTGGCCTGCCAAGAGCCAA--GGGCGCTGTGTTT----------GCATGTACAGCAGGCGTCTGATACGGTTCTGGGGCAGACGCCAGCCAGGCCGAGCAGGCAGCCTCCACTGCTCCGTGCATGGGGTCAGAGTCCACAGCATGGGACCTGGTCCCTGG s panTro5.chr7_NW_015973580v1_random 8808 292 - 83720 TGCTGTTGGAAGCA-GAGCTTGCGTCCATGCTCACAGCAGCACCAGCCGCAATCAGTCACTGAGGTCTGTGCTGGGTGTGGAAGATGAGAGTGGTACCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATTAGCGG-AGACTGGCCTGCCAAGAGCCAA--GGGCACTGTGTTT----------GCATGTACAGCAGGCGTCTGATACGGTTCTGGGGCAGACGCCAGCCAGGCCGAGCAGGCAGCCTCCACTGCTCCGTGCATGGGGTCAGAGTCCACAGCATGGGACCTGATCCCTGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524683 292 + 162613886 TGCTGTTGGAAGCA-GAGCTTGCGTCCATGCTCACAGCAGCACCAGCCGCAATCAGTCACTGAGGTCTGTGCTGGGTGTGGAAGATGAGAGTGGTACCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATTAGCGG-AGACTGGCCTGCCAAGAGCCAA--GGGCGCTGTGTTT----------GCATGTACAGCAGGCATCTGATACGGTTCTGGGGCAGACGCCAGCCAGGCCGAGCAGGCAGCCTCCACTGCTCCGTGCATGGGGTCAGAGTCCACAGCATGGGACCTGATCCCTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 95987 291 - 432965 TGCTGTTGGAAGCA-GAGCTTGCGTCCACGCTCACAGCAGCACCAGCCGCAATCAGTCA-TGAGGTCTGTGCTGGGTGTGGAACATGAGAGTGGTACCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATTAGCGG-AGACCGGCTTGCCAAGAGCCAA--GGGCGCTGTGTTT----------GCATGTACAGCAGGCGTCTGATACGGTTCTGGGGCAGACGCCAGCCAGGCCGAGCAGGCAGTCTCCACTGCTGCGTGCATGGGGTCAGAGTCCACAGCATGGGACCTGGTCCCTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154505 292 + 85365473 TGCTGTGGGAAGCA-TAGCTTTCGTCCACGCTCACAGCAGCACCAGCCACGATCAGTCACCGAGGCCTGTGCTGGGTGTGGAAGATGAGAGTGGTACCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATTAGTGG-AGACCGGCCTGCCAAGAGCCAA--GGGCGCTGTGTTT----------CCATGTACAGCAGGCCTCAGATACGGTTCTGGGGCAGACGCCAGCCAGGCGGAGCAGGCAGGCTCCACTGCTTCCTGCGTGGGGTCAGAGTCCACAGCATGGGACCTGGTCCCTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001427 291 + 185818997 TGCTGTGGGAAGCA-GAGCTTGCGTCCATGCTCACAGCAGCACCGGCCATGATCAGTCACTGAGACCTGTGCTGGGGGTGGAAGATGACAGTGGGGCCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATGAGCAG-ACACCGGCCTGCCAAGAGCCAA--GGGTGCTGTGTTT----------GCATGTGCAGCAGGGCTCCCGTACGGCGCTGGGGCAGACGCCAGCCAGGCGGGGCAGGCAGGCTCTGCGGCTTCCTGCAT-GGGTCAGAGTCCACAGCACGGGGTCCGGTCCCTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617399 291 + 192294377 TGCTGTGGGAAGCA-GAGCTTGCGTCCATGCTCACAGCAGCACCGGCCATGATCAGTCACTGAGACCTGTGCTGGGGGTGGAAGATGACAGTGGGGCCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATGAGCAG-ACACCGGCCTGCCAAGAGCCAA--GGGTGCTGTGTTT----------GCATGTGCAGCAGGGCTCCCGTACGGCGCTGGGGCAGACGCCAGCCAGGCGGGGCAGGCAGGCTCTGCGGCTTCCTGCAT-GGGTCAGAGTCCACAGCACGGGGTCCGGTCCCTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384446 291 - 9440265 TGCTGTGGGAAGCA-GAGCTTGCGTCCATGCTCACAGCAGCACCGGCCATGATCAGTCACTGAGACCTGTGCTGGGGGTGGAAGATGACAGTGGGGCCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATGAGCAG-ACACCGGCCTGCCAAGAGCCAA--GGGTGCTGTGTTT----------GCATGTGCAGCAGGGCTCCCGTACGGCGCTGGGGCAGACGCCAGCCAGGCGGGGCAGGCAGGCTCTGCGGCTTCCTGCAT-GGGTCAGAGTCCACAGCACGGGGTCCGGTCCCTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972498 291 - 21915920 TGCTGTGGGAAGCA-GAGCTTGCGTCCATGCTCACAGCAGCACCAGCCATGATCAGTCACTGAGACCTGTGCTGGGGGTGGAAGATGACAGTGGGGCCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATGAGCAG-ACACCGGCCTGCCAAGAGCCAA--GGGCGCTGTGTTT----------GCATGTGCAGCAGGGCTCCGGTACGGCACTGGGGCAGACGCCAGCCAGGCGGGGCAGGCAGGCTCTGCGGCTTCCTGCAT-GGGTCAGAGTCCACAGCACGGGGTCTGGTCCCTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 108562 290 - 21531802 TGCTGTGGGAAGCA-GAGCTTGCGTCCATGCTCACAGCAGCACCGGCCATGATCAGTCACTGAGGCCTGTGCTGGGGGTGGAACATGACAGTGGGACCACATGCTCCTCAATCTGGAGTAGAGGTTTG--TCTGTGATGAGCAG-ACACCGGCCTGCCAAGAGCCAA--GGGTGCTGTGTTT----------GCATGTGCAGCAGCGCTCCGGTACGGCGCTGGGGCAGATGCCAGCCAGGCGGGGTAGGCGGGCTCTGCGGCTTCCTGCAT-GGGTCAGAGTCCAC-GCACGGGGCCTGGTCCCCGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 140828 291 - 2515279 TGCTGTGGGAAGCA-GAGCTTGCGTCCATGCTCACAGCAGCACCAGCCATGATCAGTCACTGAGACCTGTGCTGGGGGTGGAAGATGACAGTGGGGCCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATGAGCAG-ACACCGGCCTGCCAAGAGCCAA--GGGCGCTGTGTTT----------GCATGTGCAGCAGGGCTCCGGTACGGCGCTGGGGCAGACGCCAGCCAGGCGGGGCAGGCAGGCTCTGCGGCTTCCTGCAT-GGGTCGGAGTCCACAGCACGGGGTCCGGTCCCTGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 298519 290 + 6586416 TGCTGTGGGAAGCA-GAACTTGCGTCCATGCTCACAGCAGCACCGGCCATGATCAGTCACTGAGGCCTGTGCTGGGGGTGG-AGATGACAGTGGGGCCACATGTTCCTCAATCTGGACTAGAGGTTTG--TCTGTGATGAGCAG-ACACTGGCCTGCCAAGAGCCAA--GAGCGCTGTGTTT----------GCATGTGCAGCAGGGCTCCGGTACAGTGCTGGGGCAGACGCCAGCCAGGCGGGGCAGGCAGGCTCTGTGGCTTCCTGCAT-GGGTCAGAGTCCACGGCACGGGGCCTGGTCCCTGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27352 291 + 138751 TGCCGTGGGAAGCGTGAGCTTGCGTCTGTGCTCACATCAGCACCAGCCGTGATCAGTCACTGAGGTCTGTGCTGGGTGTAGAAGACGAGATTGGTGCCATATGTTCCTCCATCTGGACGAGGAGTTTG--TCTGTGATTAGCGG-AGACTGCCCTGTCAAGAGCCAA--GGGCAC--TGTCT----------GCTTGTGCAGCAGGGCTCTGATACAGTTCTGGGGCAGACGCCAGCCAGGCAGAGCAGACAAGCTCTGCTGCTTCCTGCCTGGGGTCAGAGTCCAAAGAACGGGGCCTGGTCTCTGG i calJac3.chrUn_GL286444 C 0 I 190 s cebCap1.NW_016107703v1 506431 293 - 2125214 TGCCATGGGAAGCATGAGCTTGCGTCTGTGCTCACATCAGCACCAGCCGTGATCAGTCACTGAGGTCTGTGCTGGGTGTGGAAGATGAGATTGGTGCCACACGTTCCTCCATCCGGACGAGGAGTTGG--TCTGCGATTAGCAG-AGACCACCCTATCAAGAGCCAA--GGGCACTGTGTTT----------GCTCATGCAGCAGGGCTCTGATACAGTTCTGGGGCAGATGCCAGCCAGGCAGAGCAAACAAGCTCCACTGCTTCCTGCCTGGGGTCAGAGTCCACAGAATGGGGCCTGGTCCCTGG i cebCap1.NW_016107703v1 C 0 I 200 s otoGar3.GL873611 2236871 279 - 8137123 TGCCTGAGAAGTCC-AAGCTTGTGC---------------------------TCAGTTCTGGAGGTCTGTCCTCAGTGTACAAAGCAGGAGTGGTGCCACATGTTCCCAGATCTGGACTAGAGGTTTGTCTCTATGATTAACAGAAGACCAGCCTACCAACAGCCAACCTAGTACTGTATTTGGGATGTTTGGGATATGTGGCAAGACTCAGAGGCAGCTCC-CAGCAGACTCCAGCTGGGAGGGGCAAGCGGGCTCGGCTACTTCCTCCACTAGGGGCTAATCCAAAGCATAAGGCCTGGCCCAAAG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61030174 197 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=167739.000000 s hg38.chr7_KI270899v1_alt 134833 26 + 190869 GCAGGCCTGACAGACATCTGTGAACC s panTro5.chr7_NW_015973580v1_random 9100 26 - 83720 GCAGGCCCGACAGACATCTGTGAACC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 524975 26 + 162613886 GCAGGCCCGACAGACATCTGTGAACC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 96278 26 - 432965 GCAGGCTCGACAGACATCTGTGAACC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154797 26 + 85365473 GCAGGCCCGACGGACATCTGTGAACC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001718 26 + 185818997 GCAAGCCCGACAGACATCTGTGAACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617690 26 + 192294377 GCAAGCCCGACAGACATCTGTGAACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384737 26 - 9440265 GCAAGCCCGACAGACATCTGTGAACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972789 26 - 21915920 GCAAGCCCGACAGACATCTGTGAACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 108852 26 - 21531802 GCAGGCCCGATAGACATCTGTGAACC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 141119 26 - 2515279 GCAAGCCCGACAGACATCTGTGAACC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 298809 26 + 6586416 GCAGGCCCGACAGACATCTGTGGACC i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2237150 26 - 8137123 GCAGGGTAGGTGGACATCTGTGAGTT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61030174 197 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506724 200 - 2125214 I e calJac3.chrUn_GL286444 27643 190 + 138751 I a score=37797.000000 s hg38.chr7_KI270899v1_alt 134859 12 + 190869 AGGAATGGGCAT s panTro5.chr7_NW_015973580v1_random 9126 12 - 83720 AGGAATGGGCAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 525001 12 + 162613886 AGGAATGGGCAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 96304 12 - 432965 AGGAATGGGCAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154823 10 + 85365473 AGGAATGGGC-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001744 10 + 185818997 AGGAACGGTC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617716 10 + 192294377 AGGAACGGTC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384763 10 - 9440265 AGGAACGGTC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972815 10 - 21915920 AGGAACGGTC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 108878 10 - 21531802 AGGAATGGTC-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 141145 10 - 2515279 AGGAACGGTC-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 298835 10 + 6586416 AGGAATGGTC-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27833 10 + 138751 AGGAATGAGC-- i calJac3.chrUn_GL286444 I 190 I 2 s otoGar3.GL873611 2237176 7 - 8137123 GCGAGTA----- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61030174 197 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 506724 200 - 2125214 I a score=2318425.000000 s hg38.chr7_KI270899v1_alt 134871 340 + 190869 ATTCCAGGAGGTCT-----------------------------------------------------------GGCACAAAGCAAA-----GTCATTGTAGACTTTGGCAATTGCATTTGTTCCAGATAATACATTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTAAAGTTTGAAGCCAAAACAAAATGCAGACAGGCTGTACCCAGCAATTCCTGACTCTGCAATCTGGGCCTAATT-CAAGTACTCATCTCCATGGCCTG-CCAAAACCCTCCCACCGGAGCTCAC-----------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTGGTCCA-------------------------------------GTGCTCAGCACCATTCATACCTATGTTCGGGGACAGAAGCCAC--TCTGGGGACTAGGAAGAAAACACGTAaaggaattgagcttaaaataaaaaga s panTro5.chr7_NW_015973580v1_random 9138 350 - 83720 ATTCCAGGAGGTCT-----------------------------------------------------------GGCACAAAGCAAA-----GTCATTGTAGACTTTGGCAATTGCATTTGTTCCAGATAACACATTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTAAAGTTTGAAGCCAAAACAAAATGCAGACAGGCTGTACCCAGCAATTCCTGACTCTGCAATCTGGGCCTAACT-CAAGTACTCATCTCCATGGCCTG-CCAAAACCCTCCCACCGGAGCTCAC-----------------------------------C--GGAGCTCA-----------------------------------------------CC-----------------------------------------------------------------------------------------------------CTGTGGTCCA-------------------------------------GTGCTCAGCACCATTCATACCTATGTTCGGGGACAGAAGCCAC--TCTGGGGACTAGGAAGAAAACACGTAaaggaattgagcttaaaataaaaaga i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 525013 350 + 162613886 ATTCCAGGAGGTCT-----------------------------------------------------------GGCACAAAGCAAA-----GTCATTGTAGACTTTGGCAATTGCATTTGTTCCAGATAACACATTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTAAAGTTTGAAGCCAAAACAAAATGCAGACAGGCTGTACCCAGCAATTCCTGACTCTGCAATCTGGGCCTAATT-CAAGTACTCATCTCCATGGCCTG-CCAAAACCCTCCCACCGGAGCTCAC-----------------------------------C--GGAGCTCA-----------------------------------------------CC-----------------------------------------------------------------------------------------------------CTGTGGTCCA-------------------------------------GTGCTCAGCACCATTCATACCTATGTTCGGGGACAGAAGCCAC--TCTGGGGACTAGGAAGAAAACAcataaaggaattgagcttaaaataaaaaga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 96316 350 - 432965 ATTCCAGGAGGTCT-----------------------------------------------------------GGCACAAAGCAAA-----GTCATTGTAGACTTTGGCAATTGCATTTGTTCCAGATAACACATTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTAAAGTTTGAAGCCAAAACAAAATGCAGACAGGCTGTACCCAGCAATTCCTGACTCTGCAATCTGGGCCTAATT-CAAGTACTCCTCTCCATGGCCTG-CCAAAACCCTCCCACCGGAGCTCAC-----------------------------------C--GGAGCTCA-----------------------------------------------CC-----------------------------------------------------------------------------------------------------CTGCGGTCCA-------------------------------------GTGCTCAGCACCATTCATACCTATGTTCGGGGACAGAAGCCAC--TCTGGGGACTAAGAAGAAAACATGTAaaggaattgagcttaaaataaaaaga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 154833 338 + 85365473 ATTCCAGGAGGTCT-----------------------------------------------------------GGCGCAAAGCAAA-----GTCATTGTAGACTTTGGCGATTGCGTTTGTTCCAGATAACACATTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTAAAGTTTGAAGCCAAAACAAAATGCAGACAGGCTGTACCCAGCAATTCCTGACTCTGCAATCTGGGCCGAATT-CAAATACTCATCTCCACGGCCTG-CCAAAACCCTCCCACCGGAGCTCAC-----------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGTCCA-------------------------------------GTGCTCAGCACCATTCATACTTACGTTTGGGGACAGAAGCCAC--TGTGGGGACTAGGAAGAAAACCTTTAAAGGAATTGAGCTTaaaataaaaaga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34001754 407 + 185818997 ATTCCAG--GGTCT-----------------------------------------------------------GGCGCAAAGCAAA-----GGCATCGTAGATTTTGGCAGCTGCATTTGTTCCAGATAACACTTTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTAAAGTTCGAAGCCAAAACAAAATGCAGACAGGCTGTG-CCAGCAATTCCTGACTCTGCAGTCTGGGCCTAATT-CAAATACTCATTTCCACG----G-TCGAAACCCTCCTACAGGAGTTAAC-----------------------------------CCTGTGGTCCAGTGCTCGGCACCGTCCTCA----------------------------CC-----------------------------------------------------------------------------------------------TGCGTTCGGTGGTCCAGTGCTCAGCACCATTCACACCTGCGTTCGGTGGTCCAGTGCTCGGCACCGTTCACACCTGCGTTCAGGGACAGAAGCCAC--TCTGGGGACTATGAAGGAAACATTCAAAGGAATTGAGCTTAaaataaacaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33617726 407 + 192294377 ATTCCAG--GGTCT-----------------------------------------------------------GGCGCAAAGCAAA-----GGCATCGTAGATTTTGGCAGCTGCATTTGTTCCAGATAACACTTTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTAAAGTTCGAAGCCAAAACAAAATGCAGACAGGCTGTG-CCAGCAATTCCTGACTCTGCAGTCTGGGCCTAATT-CAAATACTCATTTCCACG----G-TCGAAACCCTCCTACAGGAGTTAAC-----------------------------------CCTGTGGTCCAGTGCTCGGCACCGTCCTCA----------------------------CCT----------------------------------------------------------GCGTTCGGTGGTCCAGTGCTCAGCACCGTTCACACCTGCGTTCGGTGGTCCA-------------------------------------GTGCTCGGCACCGTTCACACCTGCGTTCAGGGACAGAAGCCAC--TCTGGGGACTATGAAGGAAACATTCAaaggaattgagcttaaaataaacaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4384773 407 - 9440265 ATTCCAG--GGTCT-----------------------------------------------------------GGCGCAAAGCAAA-----GGCATCGTAGATTTTGGCAGCTGCATTTGTTCCAGATAACACTTTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTAAAGTTCGAAGCCAAAACAAAATGCAGACAGGCTGTG-CCAGCAATTCCTGACTCTGCAGTCTGGGCCTAATT-CAAATACTCATTTCCACG----G-TCGAAACCCTCCTACAGGAGTTAAC-----------------------------------CCTGTGGTCCAGTGCTCGGCACCGTTCTCA----------------------------CCT----------------------GCGTTCGGTGGTCCAGTGCTCAGCACCGTTCACACC------------------------------------TGCATTCGGTGGTCCA-------------------------------------GTGCTCGGCACCGTTCACACCTGCGTTCAGGGACAGAAGCCAC--TCTGGGGACTATGAAGGAAACATTCAaaggaattgagcttaaaataaacaga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16972825 407 - 21915920 ATTCCAG--GGTCT-----------------------------------------------------------GGCGCAAAGCAAA-----GGCATCGTAGATTTTGGCAGCTGCATTTGTTCCAGATAACACTTTTTCTTAGGACCTAAGGCTTCAGAACTTAAAATGAATGTTGTAAAGTTCGAAGCCAAAACAAAATGCAGACAGGTTGTG-CCAGCAATTCCTGACTCTGCAGTCTGGGCCTAATT-CAAATACTCATTTCCACG----G-TCGAAACCCTCCCACCGGAGTTAAC-----------------------------------CCTGCGGTCCAGTGCTCGGCACCGTTCTCA----------------------------CCTGCGTTCGGTGGTCCAGTGCTCAG----------------------------------------------------------CACTGTTCACACCTGCGTTCGGTGGTCCA-------------------------------------GTGCTCGGCACCGTTCACACCTGCGTTCGGGGACAGAAGCCAC--TCTGGGGACTACGAAGGAAACATTCAaaggaattgagcttaaaataaacaga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 108888 405 - 21531802 ATTCCAG--GGTCT-----------------------------------------------------------GGCGCAAAGCAAA-----GGCATCGTAGATTTTGGCAACTGCATTTGTTCCAGATAACACTTTTTCTTAGGACCTAAGGCCTCAGAATTTAAAATGAATGTTGTAAAGTTCGAAGCCAAAGCAAAATGCAGACAGGCTGTG-CCAGCAATTCCTGACTCTGTAGTCTGGGCCTAATT-CAAATACTCATTTCCACG----G-CCGAAACCCTCCCACTGGAGCTACCTACGGTCCAGTGCTCGGCACCGTTCACACCCGCGTTCGGTGGTCCAGTGCTCGGCACCGTTCACACCCGC---------------------------------------------------------------------------------------------------------------------------GTTCGGTGGTCCA-------------------------------------GTGCTCGGCACCGTTCACACCTGCATTCCGGGACAGAAGCCAC--TCTGGGGACTAGGAAGAAAACACTTAaaggaattgagcttaaaataaacaga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 141155 407 - 2515279 ATTCCAG--GGTCT-----------------------------------------------------------GGCGCAAAGCAAA-----GGCATCGTAGATTTTGGCAGCTGCATTTGTTCCAGATAACACTTTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTAAAGTTTGAAGCCAAAACAAAATGCAGACAGGCTGTG-CCAGCAATTCCTGACTCTGCAGTCTGGGCCTAATT-CAAATACTCATTTCCATG----G-TCGAAACCCTCCCACCGCAGTTAAC-----------------------------------CCTGCGGTCCAGTGCTCAGCACCGTTCTCACCTGCGTTCGGTGGTCCAGTGCTCAGCACC--------------------------------------------------------------------------------------GTTCACACCTGCGTTCGGTGGTCCA-------------------------------------GTGCTCGGCACCGTTCACACCTGCGTTCGGGGACAGAAGCCAC--TCTGGGGACTACGAAGGAAACATTCAaaggaattgagcttaaaataaacaga i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 298845 335 + 6586416 ATTCCAGGAGGTCT-----------------------------------------------------------GGCGCAAAGCAAA-----GGCACTGTAGATTTTGGCAGCTGCATTTGTTCCAGATAACACTTTTTCTTAGGACCTAAGGCCTCAGAACTTAAAATGAATGTTGTGAAGTTCGAAGCCAAAACAAAATGCAGACAGGCTGTG-CCAGCAATTCCTGACTCTGCAGTCTGGGTCTAATT-CAAATACCCATCTCCACG----G-CCAAAACCCTCCCACCGGAGCTCAC-----------------------------------CCTGCGGTCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTCGGCACCATTCACACCTGCGTTCGGGGACAGAAGCCAC--TCTGGGGACTAGGAAGAAAACATTTAAAGGAACTGAGCtgaaaataaacaga i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 27845 325 + 138751 --TCTGGGAGGTCT-----------------------------------------------------------GGCACAAAGCAAATTCCCAAAATTGTAGATTTTGGCAATTCCATTTGTTCCAGATTATGCATTTTCTTAAGATCTAAGGTCCCAGAATTTAAAATGAATGCTGTAAAGTTAGAAGCCAAAACAAAATGTAGACAGACTGTACCCAGCACTTCCTGACTCTGCAATACAGGCCTAATT-CAAATAGTCATCTCCATGGTCTG-TCAAAACCTTCCCACTGGAGCAAGC-----------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTGGTCCA-------------------------------------GTGCTCAGCACCATTCATGCCTACATTCA--------------------GGGACTAGGAAGGTAACATTTAAAGGAACTGAGCTTGaaataaaaaga i calJac3.chrUn_GL286444 I 2 C 0 s cebCap1.NW_016107703v1 506924 322 - 2125214 ATTCCGGGAGGTCT-----------------------------------------------------------GGCACAAAGCAAA-----GACACTATAGATTTTGGCAATTCCATTTGTTCCAGATTATGCATTTTCTTAGGACCTACGGTCCCAGAATTTAAAATGAATGCTGTAAAGTTAGAAGCCAAAACAAAATGCAGACAGACTGTACCCAGCACTTCCTGACTCTGCAATACGGGCCTAATT-CAAATAGTCATCTCCATGGTCTG-CCAAAACCCTCCCACTGGAGCAAGC-----------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTGGTCCA-------------------------------------GCGCTCAGCACCATTCATGCCTACATTCA--------------------GGGACTAGGAAGGAAAcatttaaaggaattgaggttgaaataaaaaga i cebCap1.NW_016107703v1 I 200 C 0 s otoGar3.GL873611 2237183 401 - 8137123 ATTTCAGGAGGTCTAAATAGCTTAAGCAAAACCCCAAACAAAACAATATCAAAGGAAAAAAGAAAAAACAACAAACCCTAAGCTAA-----AGCACAGTAGACTTTGGCAATTACATTTGTTGCAGATAACACATTATCTTAGGGCCTAAGGTTCAAGTACTTAAAAT-AACATTGTTAAATTAGAAATCAAAACAAAATGCAGACAGGTTGCACCCAGTACTTCCTGACATTGCAAAATAGGCCTAATTAAAAACACTCAGCTCTGTGGCCCGCCCCAAACCCTTCCAATGGTGCCAAC-----------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAGGCTCA-------------------------------------GTGCTCA-CTCCATTTATACCAACATTCAGGGACAGAAGCCAACGCTTGCAGATTAAGCAAAAAGCATTTATAGGAATTAAGCTTTACAAAAAAGGA i otoGar3.GL873611 C 0 I 357 e canFam3.chr6 61030174 197 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=2088926.000000 s hg38.chr7_KI270899v1_alt 135211 291 + 190869 aattcggtatatttcatacccactagcaatatgcctttagaaag--agacaggctggcaactgcacgttgggaaggacgcacagtgactagaactctcgttccctactgctgggagtgcaaaacggaacagccactctcccgac--tgcccagcgaccacactcccgggtgtttacccaagagaaataaaaatcgtgtctgta-----------aaagaatgtctatcagccttattgataacgtctccaaaccctgattacatcaagtgtccgaccgcaggaggacggacgagaacgggtggccc- s panTro5.chr7_NW_015973580v1_random 9488 291 - 83720 aattcggcatatttcacacccactagcaatatgcctttagaaag--agacaggctggcaactgcacgttgggaaggatgcacagtgaccggaactctcgttccctactgctgggagtgcaaaacggaacagccactctcccgac--tgcccagcgaccacactcccgggtgtttacccaagagaaataaaaatcgtgtctgta-----------aaagaatgtctatcagccttattgataacatctccaaaccctgattgcatcaagtgtccaaccgcaggaggacggacgagaacgcgtggccc- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 525363 291 + 162613886 aattcggtatatttcacacccactagcaatatgcctttagaaag--agacaggctggcaactgcacgttgggaaggacgcacagtgaccggaactctcgttccctactgctgggagtgcaaaacggaacagccactctcccgac--tgcccagcgaccacactcccgggtgtttacccaagagaaataaaaatcgtgtctgta-----------aaagaatgtctatcagccttattgataacatctccaaaccctgattgcatcaagtgtccaaccgcaggaggacggacgagaacgcgtggccc- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 96666 293 - 432965 aattgggtatatttcacacccactagcaatatgcctttagaaag--agacaggctggcaactgcacgttgggaaggacgcacagtgactggaactctcgttccctgctgctgggagcgcaaaacggaacagccactctcccgacagtgcccagcgaccatgctcccgggtgtttacccaagagaaataaaaatcgtgtctgta-----------aaagaatgtctatcagccttattgataatatctccaaaccctaattgcatcaagtgttcaaccgcaggaggacggaCGAGGACTCATGGCCC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 155171 277 + 85365473 aattgggtatatttcacacccacgagcaatatgc--------ag--agagaggctggcaacagcacgttgggaaggacgcggagggaccggaactctcgctccctgctgctgggagtgcaaaat-gaacagccactctcccgacagtgcccagcgaccacgctcctgggtgtttacccaagagaaataaaaactgtgtctgta-----------aaagaatgtttatcagccttatcaatcatctctccaaaccctaattgcatcaaatgtccaaccgcaggaggatggatgaGAACTC-------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34002161 293 + 185818997 aattgggtgtatttcacacccactagcaacatgattttggaaag--caagaggctgccaacagcacgttgggaaggacgcggaggggctggaactctcattccccgcggctgggagtgcaaaacggaacagccactctcccgacagcgcccagcaaccacgctcctgggtatttctctaagagaaataaaaatcgtgtctgta-----------aaagaatatttatcagccttattcacaatatctccaaaccccaattgcatcaaatgtccgacggcaggaggatggacgagaactcgtggccc- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33618133 293 + 192294377 aattgggtgtatttcacacccactagcaacatgattttggaaag--caagaggctgccaacagcacgttgggaaggacgcggaggggctggaactctcattccccgcggctgggagtgcaaaacggaacagccactctcccgacagcgcccagcaaccacgctcctgggtatttctctaagagaaataaaaatcgtgtctgta-----------aaagaatgtttatcagccttattcacaatatctccaaaccccaattgcatcaaatgtccgacggcaggaggatggacgagaactcgtggccc- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4385180 293 - 9440265 aattgggtgtatttcacacccactagcaacatgattttggaaag--cgagaggctgccaacagcacgttgggaaggacgcggaggggctggaactctcattccccgcggctgggagtgcaaaatggaacagccactctcccgacagcgcccagcgaccacgctcctgggtatttctctaagagaaataaaaatcatgtctgta-----------aaagaatgtttatcagccttattcacaatatctccaaaccccaattgcatcaaatgtccgacggcaggaggatggacgagaactcgtggccc- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16973232 293 - 21915920 aattgggtgtatttcacacccactagcaacatgattttggaaag--cgagaggctggcaacagcacgttgggaaggacgcagaggggctggaactctcattccccacggctgggagtgcaaaacggaacagccactctcccgatagcgcccagcaaccatgctcctgggtatttctttaagataaataaaaatcgtgtctgta-----------aaagaatgtttatcagccttattcacaatatctccaagccccaattgcatcaaatgtccgacggcaggaggatggacgagaactcgtggccc- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 109293 293 - 21531802 aattgggtgtatttcacacccactagcaacatgcctttggaaag--cgagaggctagcaacagcacgttgggaaggacgcggaggggctggaactctcgttccccgcggctgggagtacaaaacggaatagccactctcccgacagcgcccagcaaccacgctcctgggtgtttctccaagagaaataaaaatcgtgtctgca-----------aaagaatgtttatcagccttatttacaatatctccaaaccccaatagcatcaaacgtccgacggcaggaggatggacgagaactcgtggccc- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 141562 293 - 2515279 aattgggtgtatttcacacctactagcaacatgattttggaaag--cgagaggctggcaacagcacgttgggaaggacacggaggggctggaactctcattccctgcggctgggagtgcaaaacggaacagccactctcccgatagcgcccagcgaccatgctcctgggtatttctctaagagaaataaaaatcgtgtctgta-----------aaagaatgtttatcagccttattcacaatatctccaagccccaattgcatcaaatgtccgacggcaggaggatggacgagaactcatggccc- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 299180 293 + 6586416 aattgggtgtatttcacacctactagcaacatgcctttggaaag--cgagaggctggcaacagcacgttgggaaggacgcggaggggctggaactcccgttccccgcagctgggagtgcaaaacggaacagccactcccccgacagtgcccagccaccacgctcctgggtgtttctctaagagaaataaaaatcgtgtctgca-----------aaagaatgtttatcagccttatttacaatatctccgaaccccaattccatcaaatgtctaacggcaggagaatggacgagaactcgtggccc- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 28170 269 + 138751 aattgggtatatttcacacccactagcaatatgcctttaaaaag----agaggctggcaacagca-attgggaaggacacagagtgactggaactctcattccttcctgctgggagtgcaaaaaggcacagccactctgccgacagtgcccagcagccgcactcctaggtattcacccaagagaaatgaaaatcatgtctgtaaaagacttgtaaaagaatgtttatcag-cttattcataatatctccaaaccctaatgacatgaaatgtc-------------------------------caC- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 507246 300 - 2125214 aaccgggtatatttcacatccactagcaatatgcctttaaaaag----agaggctggcaacagca-attgggaaggacacagagtgactggaactctcattcattcctgctgggagtgcaaaatggcacagccactctgccgacagtgcccagcagccgcgctcctaggtatttacccaagagaaatgaaaatcatgtctgcaaaagactcgt-aaagaatgtttatcagccttattcataatatctccaaacccgaatgacctgaaatgtccaccaactggaggatggacaagaactcgtggcac- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2237941 304 - 8137123 aatcaggtatatttcatgcccactaacaatatgtccttaaaaagagagagaggcttacaaggctgagctgagga-gatgtggagcagtgagaactgtcattcactgccgctgggc-tgagaaatggactggccactttggc-ataatgacctgcaactgcacccctaggtgtgtaccccagagaaatgaaaatcgtgtttgcaacagactcataaaagaatatttatcaatcctattcttaatatcctgaacctggaattacatcagatgtccgtccataggagaatagacaagaacatgtgacaca i otoGar3.GL873611 I 357 C 0 e canFam3.chr6 61030174 197 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=562775.000000 s hg38.chr7_KI270899v1_alt 135502 72 + 190869 ttcacagaac--aggctaattctcagcaTGTGGGAGCACTCGTGCGTGGA----AGGCCAGGCGTGTGACACGTGTGA s panTro5.chr7_NW_015973580v1_random 9779 72 - 83720 ttcacagaac--aggctaattctcagcaTGTGGGAGCACTCGTGCGTGGA----AGGCCAGGCGTGTGACACGTGTGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 525654 72 + 162613886 ttcacagaac--aggctaattctcagcaTGTGGGAGCACTCGTGCGTGGA----AGGCCAGGCGTGTGACACGTGTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 96959 72 - 432965 TTCACAGAAC--AGGCTAATTCTCAGCATGTGGGAGCACTCGTGCATGGA----AGGCCAGGCGTGTGACACGTGTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 155448 70 + 85365473 ------GGAC--AGGCTAATTCTCAGCACGTGGGAGCACTTGCGTGTGGAAGGCAGGCCAGGCGTGTGACACGTGTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34002454 76 + 185818997 ttcataggac--aggctaattctcagcaTGTGGGAACACTCGTGTGTGGAAGGAAGGCCAGGCGTGTGACACGTGTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33618426 76 + 192294377 ttcataggac--aggctaattctcagcaTGTGGGAGCACTCGTGTGTGGAAGGAAGGCCAGGCGTGTGACACGTGTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4385473 76 - 9440265 ttcataggac--aggctaattctcagcaTGTGGGAGCACTCGTGTGTGGAAGGAAGGCCAGGCGTGTGACACGTGTGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16973525 76 - 21915920 ttcataggac--aggctaattctcagcaCGTGGGAGCACTCGTGTGTGGAAGGAAGGCCAGGCGTGTGACACGTGTGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 109586 76 - 21531802 ttcataggac--aggctaattctcagcGTGTGGGAGCACTCGTGTGTGGAAGGCAGGCCAGGCGTGTGACACGTGTGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 141855 76 - 2515279 ttcataggac--aggctaattctcagcaCGTGGGAGCACTCGTGTGTGGAAGGAAGGCCAGGCGTGTGACACGTGTGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 299473 76 + 6586416 ttcgtaggac--aggctaattctcagcGTGTGGGAGCGCTCGTGTGTGGAAGGCAGGCCAGGCGTGTGACACGTGTGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 28439 74 + 138751 TTCATAGGAT--GGGCTCCTTCTCAGCAGGTGAAAGCACAC--GTGTGGAAGGAATGCCAGACATGTGACACGTGTGA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 507546 76 - 2125214 ttcataggac--gggctccttctcagcaGGTGAAAGCACACATGTGTGGATGGAATGCCAGacatgtgacacatgtga i cebCap1.NW_016107703v1 C 0 I 110 s otoGar3.GL873611 2238245 74 - 8137123 ttcacacatg--gggatacCTCT-AGGGTGTGGAAGCAGTCACGTGTGGAAGGAACCCCA-ACATGTGGCATGTGTGA i otoGar3.GL873611 C 0 I 2 s canFam3.chr6 61030371 60 - 77573801 tttaaagaaCTTGGATTGATCCTCAGG----------------GTGTGGAAGGAAAGCCAAGGGCATGCAATGTGA-- i canFam3.chr6 I 197 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=220564.000000 s hg38.chr7_KI270899v1_alt 135574 38 + 190869 GCATAGCGTGGGCA-G-GACGCACGTGA--------------------------------------------------------------GGGCAGTGGCGG s panTro5.chr7_NW_015973580v1_random 9851 38 - 83720 GCATAGCGTGGGCA-G-GACGCACGTGT--------------------------------------------------------------GGGCAGTGGCGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 525726 38 + 162613886 GCACAGCGTGGGCA-G-GACGCACGTGT--------------------------------------------------------------GGGCAGTGGCGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 97031 38 - 432965 GCACAGCGTGGGCA-G-GATGCACGTGT--------------------------------------------------------------GGGCAGTGGCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 155518 38 + 85365473 GCAGAGCGTGGGCA-G-GATGCACGTGT--------------------------------------------------------------GGGCAGTGGCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34002530 38 + 185818997 GCGTAGCGTGGGCA-G-GATGCACGTGT--------------------------------------------------------------GGGCAGTGACTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33618502 38 + 192294377 GCGTAGCGTGGGCA-G-GATGCACGTGT--------------------------------------------------------------GGGCAGTGACTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4385549 38 - 9440265 GCGTAGCGTGGGCA-G-GATGCACGTGT--------------------------------------------------------------GGGCAGTGACTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16973601 38 - 21915920 GCGTAGCGTGGGCA-G-GATGCACGTGT--------------------------------------------------------------GGGCAGTGACTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 109662 38 - 21531802 GCATAGCGTGGGCA-G-GATGCACGTGT--------------------------------------------------------------GGGCAGTGACTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 141931 38 - 2515279 GCGTAGCGTGGGCA-G-GATGCACATGT--------------------------------------------------------------GGGCAGTGACTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 299549 38 + 6586416 GCGTAGCGTGGGCA-G-GATGCACGTGT--------------------------------------------------------------GGGCGGTGACTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 28513 100 + 138751 -CATACCATGTGCAGG-GATGCACCCATTTTGCAGCAGGGGGAGACCAGCCATGAGCTGTAGGGTAGGGGCCTACCTTGTCCGCTTCCCCTGGCGGAGACTG i calJac3.chrUn_GL286444 C 0 C 0 s otoGar3.GL873611 2238321 38 - 8137123 GCACAGCGTGTACA-GCGATGCAGGTG---------------------------------------------------------------GGGTGGGGAGAA i otoGar3.GL873611 I 2 I 2 s canFam3.chr6 61030431 27 - 77573801 GCACAGCGTGTGCA-G-GA-----ATGT--------------------------------------------------------------GGGCGG------ i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 507622 110 - 2125214 I a score=4762139.000000 s hg38.chr7_KI270899v1_alt 135612 610 + 190869 CTTCAAGCACAAATCCTAGGGACTGG-GTGGGTCCTTGGAGCAGCAGGCCTGGGTGAGCCTTAGTGGACTCCTCTGTGGCCTGTAGGGGGGTCTCTGCCCTCATCACAC-CCA--------AGGAGACCAGGAGACCCGCACAGATGCAGGTTCTCCTCAGTTGT---C---TAGT-GGAGGACTTCAGATTGGAAAGAAACT-------------CTCAGCCTGGCAGCCTCACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACTATTGGG-----CCCCACGC--------------------------------------------------------------TGCCGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTCTTTTCCCAGACTTTGGAAGGTCCCCGTTGTCTGCAGG-GGGTCCCAGCCCTGCCAGGGGAAACCCCCCAAATCCGAAGGCAAGGGAACGCCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCGCAGTT-----------------------CTCCTG-------TCTTCAC-AAGATG-CCTGACCCCGGCTGA-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACATTAGGGCACTTCTCCCTGTATTTTGGTATCAACCTATTTCCCCTACCCTGCCTCAGTCCTATTGCTTCTTTGTGAACTTTGCTTAGAGAATCTTCTCCTGAAG s panTro5.chr7_NW_015973580v1_random 9889 610 - 83720 CTTCAAGCACAAATCCTAGGGACTGG-GTGGGTCCTTGGAGCAGCAGGCCTGGGTGAGCCTTAGTGGACTCCTCTGTGGCCTGTAGGGGGGTCTCTGCCCTCATCACAC-CCA--------AGGAGACCAGGAGACCCACACAGGTGCAGGTTCTCCTCAGTTGT---C---TAGT-GGAGGACTTCAGATTGGAAAGAAACT-------------CTCAGCCTGGCAGCCTCACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACTATTGGG-----CCCCACGC--------------------------------------------------------------TGCCGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTCTTTTCCCAGACTTTGGAAGGTCCCCGTTGTCTGCAGG-GGGTCCCAGCCCTGCCAGGGGAAACCCCCCAAATCCGAAGGCAAGGGAACGCCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCGCAGTT-----------------------CTCCTG-------TCTTCAC-AAGATG-CCTGACCCCGGCTGA-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACATTAGGGCACTTCTCCCTGTATTTCGGTATCAACCTATTTCCCCTACCCTGCCTCAGTCCTATTGCTTCTTTGTGAACTTTGCTTAGAGAATCTTCTCCTGAAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 525764 610 + 162613886 CTTCAAGCACAAATCCTAGGGACTGG-GTGGGTCCTTGGAGCAGCAGGCCTGGGTGAGCCTTAGTGGACTCCTCTGTGGCCTGTAGGGGGGTCTCTGCCCTCATCACAC-CCA--------AGGAGACCAGGAGACCCACACAGGTGCAGGTTCTCCTCAGTTGT---C---TAGT-GGAGGACTTCAGATTGGAAAGAAACT-------------CTCAGCCTGGCAGCCTCACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACTATTGGG-----CCCCACGC--------------------------------------------------------------TGCCGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTCTCTTCCCAGACTTTGGAAGGTCCCCGTTGTCTGCAGG-GGGTCCCAGCCCTGCCAGGGGAAACCCCCCAAATCCGAAGGCAAGGGAACGCCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCGCAGTT-----------------------CTCCTG-------TCTTCAC-AAGATG-CCTGACCCCGGCTGA-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACATTAGGGCACTTCTCCCTGTATTTCGGTATCAACCTATTTCCCCTACCCTGCCTCAGTCCTATTGCTTCTTTGTGAACTTTGCTTAGAGAATCTTCTCCTGAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 97069 606 - 432965 CTTCAAGCACAAATCCTAGGGACTGG-GTGGGTCCTTGGAGCAGCAGGCCTGGGTGAGCCTTAGTGGACTCCTCTGTGGCCTGTAGGGGGGTCTCTGCCCTCATCACTC-CCA--------AGGAGACCAGGAGA-CCACACAGGTGC-GGTTCTCCTCAGTTGT---C---TAGT-GGAGGACTTCAGATTGGAAAGAAACT-------------CTCAGCCTGGCAGCCTCACAGTACTGAGGAGGCCACAGACCCAGGAAGGGCCTCACTACTGGG-----CCCCACGC--------------------------------------------------------------TGCAGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTCTTTTCCCAGACTTTGGAAGGTCCCCATTGTCTGCAGG-GGGTCCCAGCCCTGCCAGGGGAAACCCCCCAAATCCGAAGGCAAGGGCACGCCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCGCAGTT-----------------------CTCC-A-------TCTTCAC-AAGATG-CCTGACCACGGCTGA-----GTCACCTGAAATCTTTCCAAAGCA-CCTCAG------CACACATTAGGGCACTTCTCCCTGTATTTCGGTATCAACCTATTTCCCCTACCCTGCCTCAGTCCTATTGCTTCTTTGTGAACTCTGCTTAAAGAATCTTCTCCTGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 155556 609 + 85365473 CTTCAAGCACAAATCCTAGGGACTGG-GTGGGTCCTTGGAGCAACAGGCCTGGGTGAGCCTCGGTGGAATCCTCTGCGGCCTGTAGGGGGGTCTCTGCCCTCGTCACAC-CCA--------AGGAGACCAGGAGA-CCACACAGGTGCAGGTTTTCCTCAGTTGT---C---TAG--GGAAGACTTCAGATTGGAAAGAAACC-------------CTCAGCCTGGCAGCCTTACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACTATCGGG-----CCCCACGC--------------------------------------------------------------TGCAGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTCTTTTCTCACACTTTGGAAGGTCCCTGTTATCTGC--G-GGGTCCCAGCCCTGCCAGGAGAAACCCCTCAAATCCGAAGGCAAGGGAACACCCAGGAGAGGGAA-CCTGCTGTCCATGC----------------------TGCAGAAAGGCCCACAGTT-----------------------ATCCTGT----CTTCTTCAC-AAGATG-CCTGACCGTGGCTGA-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACATTAGGGCACTTCTCCCTGTATTTCGATATCAACCTGTTTCCCCTACCCTGCCTCAGTCCTATTGCTTCTTTGTGAGCTTTGCTTAGAGAATCTTCTCCTGAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34002568 607 + 185818997 CTTCAAGGACAAACCCTAGGGACTGG-GTGGGTCCTTGGAGCAACAGGTCTGGGTGAGCCTTAGTGGAATCCTCTGTGGCCTGTAGAGGGGTCTCTGCCCTCATCACAC-CCA--------AGGAGACCAGGAAA-CCACACGGGTGCAGGTTTTCCTGAGTTCT---C---TAGT-GCAGGACTTCAGATTGGAAAGAAACT-------------CTCAGCCTGGCTGCCTCACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACCGTGGGG-----CCCCACGC--------------------------------------------------------------GGCAGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTATTTTCCCAGACTCTGGAAGGTCCCCGCTGTCTGCAAG-GGGGCCCAGTCCTGCCAGGGGAAACCCCCCAAATCCGAAGGCAAGGGAACAGCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCACAGTT-----------------------ATCCCG-------TCTTCAC-AAGATG-CCTGACCGCGGCTGC-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACG--AGGGCACTTCTCCCTGTATTTTGGTATCAACTCATTTCCCCTACCCTGCCTCAGTCCGATTGCTTCTTTGTGAGCTTTGCTTAGAGAATCTTCTCCTGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33618540 607 + 192294377 CTTCAAGGACAAACCCTAGGGACTGG-GTGGGTCCTTGGAGCAACAGGTCTGGGTGAGCCTTAGTGGAATCCTCTGTGGCCTGTAGAGGGGTCTCTGCCCTCATCACAC-CCA--------AGGAGACCAGGAAA-CCACACGGGTGCAGGTTTTCCTGAGTTCT---C---TAGT-GCAGGACTTCAGATTGGAAAGAAACT-------------CTCAGCCTGGCTGCCTCACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACCGTGGGG-----CCCCACGC--------------------------------------------------------------GGCAGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTATTTTCCCAGACTCTGGAAGGTCCCCGCTGTCTGCAAG-GGGGCCCAGTCCTGCCAGGGGAAACCCCCCAAATCCGAAGGCAAGGGAACAGCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCACAGTT-----------------------ATCCCG-------TCTTCAC-AAGATG-CCTGACCGCGGCTGC-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACG--AGGGCACTTCTCCCTGTATTTTGGTATCAACTCATTTCCCCTACCCTGCCTCAGTCCGATTGCTTCTTTGTGAGCTTTGCTTAGAGAATCTTCTCCTGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4385587 670 - 9440265 CTTCAAGGACAAACCCTAGGGACTGG-GTGGGTCCTTGGAGCAACAGGTCTGGGTGAGCCTTAGTGGAATCCTCTGTGGCCTGTAGAGGGGTCTCTGCCCTCACCACAC-CCA--------AGGAGACCAGGAAA-CCACACGGGTGCAGGTTTTCCTGAGTTCT---G---TAGT-GCAGGACTTCAGATTGGAAAGAAACT-------------CTCAGCCTGGCTGCCTCACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACCGTGGGG-----CCCCACGCGGCAGGCTCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTATTTTCCCAGACTCTGGAAGGCAGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTATTTTCCCAGACTCTGGAAGGTCCCCGCTGTCTGCAAG-GGGGCCCAGTCCTGCCAGGGGAAACCCCCCAAATCCGAAGGCAAGGGAACAGCCAGGAGAGGGAACCCTGCTGTCCACGC----------------------TGCAGAAAGGCCCACAGTT-----------------------ATCCCG-------TCTTCAC-AAGATG-CCTGACCGCGGCTGC-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACG--AGGGCACTTCTCCCTGTATTTTGGTATCAACTCATTTCCCCTACCCTGCCTCAGTCCGATTACCTCTTTGTGAGCTTTGCTTAGAGAATCTTCTCCTGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16973639 607 - 21915920 CTTCAAGGACAAACCCTAGGGACTGG-GTGGGCCTTTGGAGCAACAGGTCTGGGTGAGCCTTAGTGGAATCCTCTGTGGCCTGTAGAGGGGTCTCTGCCCTCACCACAC-CCA--------AGGAGACCAGGAGA-CCACACGGGTGCAGGTTTTCCTGAGTTCT---C---TAGT-GCAGGACTTCAGATTGGAAAGAAACT-------------CTCAGCCTGGCTGCCTCACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACCGTGGGG-----CCCCACGC--------------------------------------------------------------GGCAGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTATTTTCCCAGACTCTGGAAGGTCCCTACTGTCTGCAAG-GGGGCCCAGTCCTGCCAGGGGAAACCGCCCAAATCCGAAGGCAAGGGAACAGCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCACAGTT-----------------------ATCCCG-------TCTTCAC-AAGATG-CCTGACCGCGGCTGC-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACG--AGGGCACTTCTCCCTGTATTTTGGTATCAACCCATTTCCCCTACCCTGCCTCAGTCTGATTGCTTCTTTGTGAGCTTTGCTTAGAGAATCTTCTCCTGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 109700 615 - 21531802 CTTCAAGGACAAACCCTAGGGACTGG-GTGGGTCCTTGGAGCAACAGGTCTGGGTGAGCCTTAGTGGAATCCTCTGTGGCCTGTAGAGGGGTCTCTGCCCTCACCACAC-CCAaggagaccaggagaccaggaga-ccaCACGGGTGCAGGTTTTCCTGAGTTCT---C---TAGA-GCAGGACTTCAGATTGGAACAAAACT-------------CTCAGCCTGGCAGCCTCACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACCGTGGGG-----CCCCACGC--------------------------------------------------------------GGCAGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTCTATTTTCCCAGACTCTGGAAGGTCCCCGTTGTCTGCAGG-GGGGCCCAGTCCTGCCAGGGGAAACCCCCCAAATCCGAAGGCAAGGGAACAGCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCACAGTT-----------------------ATCCCG-------TCTTCAC-AAGATG-CCTGACCGCGACTGA-----GTCACCCGAAATCTTTCCAAAGCACCCTCAG------CACACG--AGGGCACTTCTCCCTGTATTTCGGTATCAACCCACTTCCCCTACCCTGCCTCAGTCAGATTGCTTCTTTGTGAGCTTTGCTTAGAGAATCTTCTCCTGAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 141969 607 - 2515279 CTTCAAGGACAAACCCTAGGGACTGG-GTGGGCCCTTGGAGCAACAGGTCTGGGTGAGCCTTAGTGGAATCCTCTGTGGCCTGTAGAGGGGTCTCTGCCCTCACCACAC-CCA--------AGGAGACCAGGAGA-CCACACGGGTGCAGGTTTTCCTGAGTTCT---C---TAGT-GCAGGACTTCAGATTGGAAAGAAACT-------------CTCAGCCTGGCTGCCTCACAGTACTGAGGAGGCCACAGGCCCAGGAAGGGCCTCACCGTGGGG-----CCCCACGC--------------------------------------------------------------GGCAGGC-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTATTTTCCCAGACTCTGGAAGGTCCCCACTGTCTGCAAG-GGGGCCCAGTCCTGCCAGGGGAAACCCCCCAAATCCGAAGGCAAGGGAACAGCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCACAGTT-----------------------ATCCCG-------TCTTCAC-AAGATG-CCTGACCGCAGCTGC-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACG--AGGGCACTTCTCCCTGTATTTTGGTATCAACCCATTTCCCCTACCCTGCCTCAGTCCGATTGCTTCTTTGTGAGCTTTGCTTAGAGAATCTTCTCCTGAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 299587 607 + 6586416 CTTCAAGGACAAATCCTAGGGACTGG-GTGGGTCCTTGGAGCAATAGGCCTGGGTGAGCCTTAGTGGAATCCGCTGTGGCCTGTAGAGGGGTCTCTGCCCTCACCACAC-CCA--------AGGAGACCAGGAGA-CCACACGGGTGCAGGTTTTCCTGAGTTCT---C---TAGT-GCAGGACTTCAGATTGAAAAGAAACT-------------CTCAGCCTGGCAGCCTCACAGTAGTGAGGAGGCCACAGGCCCGGGAAGGGCCTCACCGTGGGG-----CCCCACGC--------------------------------------------------------------GGCAGGT-TCCTGGTGACCTGCGTCCCAGTACCTGGTCTGGTTTATTTTCCCAGACTCTGGAAGGTCCCCGTTGTCTGCAGG-GGGGCCCAGTCCTGCCAGGGGAAACCCCCCAAATCCAAAGGCAAGGGAACAGCCAGGAGAGGGAA-CCTGCTGTCCACGC----------------------TGCAGAAAGGCCCACGGTT-----------------------ATCCCG-------TCTTCAC-AAGATG-CCTGACCGCGGCTGC-----GTCACCTGAAATCTTTCCAAAGCACCCTCAG------CACACG--AGGGCACTTCTCCCTGTATTTCGGTATCAACCCACTTCCCCTACCCTGCCTCAGTCCGATTGCTTCTTTGTGAGCTTTGCTTAGAGAATCTTCTCCTGAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 28613 598 + 138751 CTTCAATGACAAATCCTCAGGACTGG-GTGGGTCCTTGGAGCAGCAGGCCTGGGTAAGCCTTAGTGGAATCCTCTGTGGCCTGTCAAGGGGTCTCTGCCCTCATCACAC-CCA--------AGGAGATCAGGAGA-CCACACTGGGGCAAGTTTTTTGGAATTCT---C---TAGT-GGAAGACTTCGGATCAGAAGGAAACTGCTG-AATCCATCCTCAGCCTGGCAGTTTCATGGTACTGAGGAGGCCGCAGGCCCAGGGAGGGGCTCACTAGTGGG-----CCCCATGC--------------------------------------------------------------TACAG---------------GCGTCCCACTGTCTGGTCCAGTTTCTTTTCCTAGACTCTTCAAGGTCCCCATTCTCTGCAGG-GTGTCCTAACCCTGCCACGGGAAACCCCCCAAATCCAAAGGCAAAAAAACAGCCAGGAGAGGGAA-CCTACTGTGCACAC----------------------TGCAGAAAGGCCCACCGTT-----------------------AACTTC-------TGTTCAT-GAGATG-CCTGACCACAG--------------CTGAAATCTCCCCAAAGCACCCCAAG------TGCACATTAGGCTGCTTCTCCCTGTATTTCACTATCAACGTATTTCCCCTACTCCGCCTCAGTCCTGTGGCTTGTTTGTGAACTTTGCTGAGTGAATCTTCTCCTGAAG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 507732 621 - 2125214 CTTCAATGACAAATCCTCAGGACTGG-GTGGGTCCTTGGAGCAGCGGGCCTGGGTGAGCCTTAGTGGAATCCTCTATGGCCTGTCAAGGGGTCTCTGCCCTCATTGCAC-CCA--------AAGAGATCAGGAGA-CCACACTGGGGCAAGTTTTCCAGAATTCT---C---TAGT-AGAGGACTTCAGATCAGAAGGAAATTGCTG-AGTCCATCCTCAGCCTGGCAGTCTCATGGTACTGAGGAGGCCACGGGCCCAGGGAGGGCCTCATTAGTGGG-----CCCCATGC--------------------------------------------------------------TACAGGC-TCCTGGCGACCTGCATCCCACTGCCTGGTCTGGTTTCTTTTCCCAGACTCTTCAAGGTCCCCGTTGTCTGCAGA-AGGTCCTAACCCTGCCAGGGGAAACCCCCCAAATCCAAAGGCAAAGGAACAGCCAGGAGAGGGAA-CCTACTGTGCACGC----------------------TGCAGAAAGGCCCACCGTT-----------------------ATCCTC-------TCTTCAT-GAGATG-CCTGACCACAGCTAA-----GTCACCTGAAATCTCCCCAAAGCACTCCAAG------CTCACATGAGGGTGCTTCTCCCCGTATTTCGGTATCAACATATTTCCCCTACTCCACCTCAGTCCTGTGGCTTGTCTGTGAACTTTGCTGAGCGAATCTTCTCCTGAAG i cebCap1.NW_016107703v1 I 110 C 0 s otoGar3.GL873611 2238361 551 - 8137123 TCTCAAGGACAACCTGTAAGTGCTGGTGTGTATCTGTAGACCAACACGCCTGGGTGTGGTTTTATGGGACCCTCTGGGGCATGTGGA-AGGTTTTAACCGTCACCACCCTCCT--------TGGGGTGCAGGAGA-----------------TTTACTGAGTTCTCACC---CAGT-GGAAG--TGCAGACTGGAAA-AAACTGCAA-TGTCCGT-CTTAG-CTGGCAGCCTCGTGCCATGGAGGAGGTCACAGCCC----AAAGGCCT-------------------ACAT---------------------------------------------------------------------------------------CCAGTAACTGGTCTGGTTTCTTTCCCTGGATTCTGCACGACCTCCTCTGCCTGCAGGCGGTGGCCAGTCCTGCTAGGAGAAAGCTCT--AACCAGACAGCAGGGG-ATGGCAGGGAGAGGGGC-CCTGCTGTCTTTGC----------------------CGCAGAGAGGCCCACAGGT-----------------------ACCCC--------TCTTCAC-AAGCAC-CCAGACCC------A-----GCCTCCTGA---CTTTTCAGAACATCACAAGAAATGCCACACATCAGGGCATTTCTCCTT-TATTTTAATGTCAGCATATTT-CCCTACCCTGCCTCATGTCTGTTGATTTTGTGTGAGCTTTGTTTAGAGAATCTTCTC---AGA i otoGar3.GL873611 I 2 C 0 s canFam3.chr6 61030458 608 - 77573801 ----------------CAAGGACTGG-GGACGTCTGTGCACC------------TGTGCCTCTGTGGACCC--------------------TCTCAGCCATCACCACCC-CTG--------AGAAGGCCAGATGG-CCACACCCATGCATGGTTT-CTGAATCCT---CACACAGTGGGAGGCCTTGTAGCCTGAAAGAAATTGCAGAAATTCATTTTCAGTTTGGTGGCCTCATGCCACTGAGG-----GCAGTCCT-----GTGCATCCATACCGGGCACGACCACAGGC--------------------------------------------------------------TGCTAGCATTCCAGTGGCCTACATCCT-GTTCATGGTCCAGTTTCTTTTCCCAGACGCTGCAGGGTCCCCAGCCTCTGCAAG-AG--------------------AAATCCTCAAACAACACGGCAGGGGAAGAGCAGGGAGAGGGGA-TCTGCCGTCTACCCCAGAGTGTGTCATGAACCAACATGCAGTTTGACATATAATTTACACAACCCTGGGTGTCAAAAGGTCCTGTGATGATTCCTCACTGAGATGCCCCGATCTAGGCTACAAGAGATCACCTGATTTCTTTCTAAAACATCCCAAG------TGCACACAAGGGCATGTCTCCATGTACTTTAAAGTCAAAGTAT---CCTTACTACATCCCATTTCCGTTGCTTTGTGGTGAGCTCTGCTTAGAAACCTTTTTCCTgggg i canFam3.chr6 C 0 I 582 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1424030.000000 s hg38.chr7_KI270899v1_alt 136222 218 + 190869 TCTGCAGAGGAAACTGGGGCGCCCTCAGATGCTGTGTTCACACTGTGTGTGGACACACAAGCATCCCCTTGGCCACCCCCAGGCAGGCCCTGCAAGTCGGAGG-CCTGAGGGGAGAACCAGTGTCCCCGAGACACTCTTGCTGGTCGGAGACGCC-TGAGTGCTGTGACCAGGCCACACACAGAGACTGGCGCTGCAGCCCCTGGAGGGG---AGGCTTCAAT s panTro5.chr7_NW_015973580v1_random 10499 218 - 83720 TCTGCAGAGGAAACTGGGGCGCCCTCAGATGCTGTGTTCACACTGTGTGTGGACACACAAGCATCCCCTCGACCACCCCCAGGCAGGCCCTGCAAGTCGGAGG-CCTGAGGGGAGAACCAGTGTCCCCGAGACACTCTTGCTGGTCGGAGACGCC-TGAGTGCTGTGACCAGGCCACACACAGAGACCGGTGCTGCAGCCACTGGAGGGG---AGGCTTCAAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 526374 218 + 162613886 TCTGCAGAGGAAACTGGGGCGCCCTCAGATGCTGTGTTCACACTGTGTGTGGACACACAAGCATCCCCTCAACCACCCCCAGGCAGGCCCTGCAAGTCGGAGG-CCTGAGGGGAGAACCAGTGTCCCCGAGACACTCTTGCTGGTCGGAGACGCC-TGAGTGCTGTGACCAGGCCACACACAGAGACCGGTGCTGCAGCCACTGGAGGGG---AGGCTTCAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 97675 215 - 432965 TCTGCAGAGGAAACTGGGGCGCCCTCATATGCTGTGTTCACACTGTGTGTGGACACACAAGCAT-CCCTCGGCCA--CCCAGGCAGGCCCTGCAAGTCGGAGG-CCTGAGGGGAGAACCAGTGTCCCCAAGGCACTCTTGCTGGTCGGAGACGCC-TGAGTGCTGTGACCAGGCCACACACAGAGACTGGCGCCGCAGCCCATGGAGGGG---AGGCTTCAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 156165 215 + 85365473 TCTGTAGAGGAACCTGGAGCGCCCTCAGACAC-GTGTTCACACTGTATGTGGACACACAGGCATCCCCTCGGCTG--CCCAGGCAGGCCCTGCAAGTCGGAGG-CCTGAGGGGAGAACCAGTGTCCCCGAGACACACTTGCTGGTCGGAGACGCC-TGAGTGCTGTGACCAGGCCACACGCAGAGACCGGCGCTGCAGCCCGTGGAGGGG---AGGCTTCAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34003175 216 + 185818997 TCTGTCGAGGAACCTGGAGTGCCCTCAGACACTGTGTTCACACTGTACGTGCAGACACATGCAGCCCCTCGGCCG--CCCAGGCAGGCCCAGCAAGTCAGAGG-CCTGAGGAAAGAACCAGCGACCCCGAGACACTCTTGCTGGCCAGAGTTGCC-TGAGTGCTGTGGTCAGGCCACACACAGAGACCGGTGCTGCAGCCTCTGGAGGGA---AGGCTTCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33619147 216 + 192294377 TCTGTCGAGGAACCTGGAGTGCCCTCAGACACTGTGTTCACACTGTACGTGCAGACACATGCAGCCCCTCGGCCG--CCCAGGCAGGCCCAGCAAGTCAGAGG-CCTGAGGAAAGAACCAGCGACCCCGAGACACTCTTGCTGGCCAGAGTTGCC-TGAGTGCTGTGGTCAGGCCACACACAGAGACCGGTGCTGCAGCCTCTGGAGGGA---AGGCTTCAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4386257 216 - 9440265 TCTGTCGAGGAACCTGGAGTGCCCTCAGACACTGTGTTCACACTGTACGTGCAAACACATGCAGCCCCTCGGCCG--CCCAGGCAGGCCCAGCAAGTCAGAGG-CCTGAGGAAAGAACCAGCGACCCCGAGACACTCTTGCTGGCCAGAGTTGCC-TGAGTGCTGTGGTCAGGCCACACACAGAGACCGGTGCTGCAGCCTCTGGAGGGA---AGGCTTCAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16974246 216 - 21915920 TCTGTCGAGGAACCTGGAGTGCCCTCAGACACTGTGTTCACACTGTACATGCAGACACATGCAGCCCCTCGGCCG--CCCAGGCAGGCCCAGCAAGTCAGAGG-CCTGAGGGAAGAACCAGCGACCCCAAGACACTCTTGCTGGCCAGAGTTGCC-TGAGTGCTGTGGTCAGGCCACACACAGAGACCGGTGCTGCAGCCTCTGGAGGGA---AGGCTTCAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 110315 214 - 21531802 TCTGTCGAGGAACCTGGAGTACCTTCAGACACTGTGTTCACAC--TACGTGGAGACACATGCAGCCCCTCGGCCG--CCCAGGCAGGCCCAGCAAGTTGGAGG-CCTGAGGGGAGACCCAGCGACCCCGAGACACTCTTGCTGGCCAGAGTCGCC-TGAGTGCTGTGATCGGGCCACACACAGAGACTGGTGCTGCAGCCTCTGGAGGGG---AGGCTTCAAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 142576 216 - 2515279 TCTGTCGAGGAACCTGGAGTGCCCTCAGACACTGTGTTCACACTGTACGTGCAGACACATGCAGCCCCTCGGCCG--CCCAGGCAGGCCCAGCAAGTCAGAGG-CCTGAGGGAAGAACCAGCGACCCCAAGACACTCTTGCTGGCCAGAGTTGCC-TGAGTGCTGTGGTCAGGCCACACACAGAGACCGGTGCTGCAGCCTCTGGAGGGA---AGGCTTCAAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 300194 216 + 6586416 TCTGTCGAGGAACCTGGAGTGACCTCAGACACTGTGTTCACACTGTACGTGCAGACACATGCAGCCCCTCGGCCG--CCCAGGCAGGCCCAGCAAGTCAGAGG-CCTGAGGGGAGAACCAGAGACCCCGAGACACTCTTGCTGGTCAGAGTCGCC-TGAGTGCTGTGGTCAGGCCACACACAGAGACTGGTGCTGCAGCCTCCGGAGGGG---AGGCTTCAGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 29211 195 + 138751 CCTGTGGAGGAGCCCGGAGCGCTGTCGGACATTGCGATCACAA--------------CATGCAGCCCC--GGCCA--CTCAGGCAGGCCCTGCGAGCTGGAGG-CCTGAGGGGAAAACCAGTGCCCCTGAGACACTCCTGTGGGTCAGAGACACCATGAGTGCTGTGACCAGGCCACAC--AGAGACT----CTGAGGCCTGCAGAGGGA---AGGCTTCAAT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 508353 193 - 2125214 CCTGTGGAGGAGCCAGGAACACTGTCGGACACTGTGATCACGC--------------CACGCAGCCCC--GGCCA--CCCAGGCAGGCCCTGCGAGCCGGAGG-CCTGAGGGGAAAATCAGTGCCCCTGAGACACTCCTGCGGGTCAGAGACACCATGAGTGCTGCAACCAGGCCACAC----AGACT----CTGTGGCCTGCGGAGGGG---AGGCTTCAAT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2238912 173 - 8137123 TTTGTGGAGGAGGCTGGAGC-CCCTCTGATGCTGTGTTCCCAT--------------TACACAGCCCTGAGAC----ACCTGTCACGCCCTGCAGGTCTGGGGCCCTGAGGGCAGAATCCACA--CACAGCACACC------------AGACACC-C-AGTGGAGTGA---------------AGCTGGGCCTTTCAGCCTGCAGAGAGGAGCAGATTCCAAT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61031066 582 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=486138.000000 s hg38.chr7_KI270899v1_alt 136440 70 + 190869 CTT------CACCCAAAGCAG--CCA-TC---AGTGGGACTCACCCTGGGCTGGCCTGACCCAGCACAAAACTATAGTGTCG s panTro5.chr7_NW_015973580v1_random 10717 71 - 83720 CTT------CACCCAAAGCAG--CCACTC---AGTGGGACTCACCCTGGGCTGGCCTGACCCAGCACAAAACTATAGTGTCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 526592 71 + 162613886 CTT------CACCCAAAGCAG--CCACTC---AGTGGGACTCACCCTGGGCTGGCCTGACCCAGCACAAAACTATAGTGTCG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 97890 71 - 432965 CTT------CACCCAAAGCAG--CCACTC---AGTGGGACTCACCCTGGGCTGGCCTGACCCAGCACAAAACTATAGTGTCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 156380 71 + 85365473 CTT------CACCCAAAGCAA--CCAGTT---AGTGGGACTCGCCCTGGGCTGGCCTGACCCAGCACAAAACTATAGTGTCg i nomLeu3.chr20 C 0 I 295 s rheMac8.chr3 34003391 68 + 185818997 CTT------CACCCAAAGCAG--CCACGC---AGTGGGACTCA-CCTGGGCTGGTCGGACCCAGCACAAAAC--TAGTGACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33619363 68 + 192294377 CTT------CACCCAAAGCAG--CCACGC---AGTGGGACTCA-CCTGGGCTGGTCGGACCCAGCACAAAAC--TAGTGACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4386473 68 - 9440265 CTT------CACCCAAAGCAG--CCACGC---AGTGGGACTCA-CCTGGGCTGGTCGGACCCGGCACAAAAC--TAGTGACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16974462 68 - 21915920 CTT------CACCCAAAGCAG--CCACAC---AGAGGGACTCA-CCTGGGCTGGCTGGACCCAGCACAAAAC--TAGTGACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 110529 68 - 21531802 CTT------TACCCAAAGCAG--CCACGC---AGTGGGACTCA-CCTGGGCTGGCCGGACCCGGCACAAAAC--TAGTGTCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 142792 68 - 2515279 CTT------CACCCAAAGCAG--CCACAC---AGGGGGACTCA-CCTGGGCTGGTTGGACCCGGCACAAAAC--TAGTGACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 300410 68 + 6586416 CTT------CACCCGAAGGAG--CTGCTC---AACGGGACTCA-CCTGGGCTGGTCGGACCCGGCACAAAAC--TAGTGTCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 29406 71 + 138751 CTT------CACCCAGAGCAC--CCACTC---AGTGGGACTCACCCTGGACTGGCCTGACCCAGCACAAAACTATTGTGTCG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 508546 71 - 2125214 CTT------CACCCAAAGCAC--TCACTC---AGTGGGACTCGCCCTGGACTGGCCTGACCCAGCACAAAACTATTGTGTCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2239085 78 - 8137123 CTTCCCACCCACTCACAGGAGCACTGCTC---AGC-GGATTAACACTGGGTTGACCTGTCCCAGCTCACAATTATTGTGTCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61031648 74 - 77573801 CTC------CCCCCAAACAAG--CATGACTTGAGTGGGACTAGACATTGGCCACGCTGACAGAGTTCAAAATGATCCTGTCA i canFam3.chr6 I 582 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=732023.000000 s hg38.chr7_KI270899v1_alt 136510 96 + 190869 AAGAAATACAGGAAATGAAAAGAAACCTAGAATGAACTGAAACCAAAATGGGGGGAAGAT-GGAA-ATATTAA---CTAC-C---CAGT-ATGTAAAACTGGTTTT s panTro5.chr7_NW_015973580v1_random 10788 96 - 83720 AAGAAATACAGGAAATGCAAAGAAACCTAGAATGAACTAAAACCAAAATGGGGGGAAGAT-GGAA-ATATTAA---CTAC-C---CGGT-ATGTAAAACTGGTTTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 526663 96 + 162613886 AAGAAATACAGGAAATGCAAAGAAACCTAGAATGAACTAAAACCAAAATGGGGGGAAGAT-GGAA-ATATTAA---CTAC-C---CGGT-ATGTAAAACTGGTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 97961 96 - 432965 AAGAAATACAGGAAATGAAAAGAAACCTAGAATGAACTAAAACCAAAATGGGGGGAAGAT-GGAA-ATATTAA---CTAC-T---CGGT-ATGTAAAACTGGTTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 156746 98 + 85365473 AAGAAACACAGAAAATCAAAAGAAACCTAG-ATGAACTAAAACCAAAATGGGGAAAAAAT-GGAATACAGTAA---CTTCTT---CGGTAAGGTAAAACTGGTTTT i nomLeu3.chr20 I 295 C 0 s rheMac8.chr3 34003459 96 + 185818997 AAGAAATGCAGAAACTCAAAAGAAACCTAGAATGAACTAAAACCAAAATGGGGAACAAGT-GGAA-ATATTAA---CTAC-T---CGGT-ATGTAAAATTGGTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33619431 96 + 192294377 AAGAAATGCAGAAACTCAAAAGAAACCTAGAATGAACTAAAACCAAAATGGGGAACAAGT-GGAA-ATATTAA---CTAC-T---CGGT-ATGTAAAATTGGTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4386541 96 - 9440265 AAGAAATGCAGAAACTCAAAAGAAACCTAGAATGAACTAAAACCAAATATGGGAAAAAGTGGGAA-ATATTAA---CTAC-----CGGT-ATGTAAGAATGGTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16974530 96 - 21915920 AAGAAATGCAGAAACTCAAAAGAAACCTAGAATGAACTAAAACCAAAATGGGGAACAAGT-GGAA-ATATTAA---CTAC-T---CGGC-ATGTAAAATTGGTTTT i cerAty1.NW_012002954v1 C 0 I 305 s chlSab2.chr28 110597 96 - 21531802 AAGAAACGCAGAAAATCAAAAGAAAGCTAGAATGAACTAAAACCAAAATGGGGAACAAGT-TGAA-ATATTAA---CTAC-T---CGGT-ATGTAAAATTGGTTGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 142860 96 - 2515279 AAGAAATGCAGAAACTCAAAAGAAACCTAGAATGAACTAAAACCAAAATGGGGAACAAGT-GGAA-ATATTAA---CTAC-T---CGGC-ATGTAAAATTGGTTTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 300478 96 + 6586416 AAGAAACGCAGAAACTCAAAAGAAACCTACAGTGAACTAAAACCAAAATGGGGAACAAGT-GGAA-ATATTAA---CTAC-T---CGGT-ATGTAAAATTGGTTTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 29477 94 + 138751 GAGAAATGCAGAAAATCAAAATAAACCTAGAATGAACGAAAACTGAAATGGAGAAAAAAC-TG---ATATTAA---CTAT-T---TGGT-TTATACAGTTGGTTTT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 508617 96 - 2125214 GAGAAATGCAGAAAATCAAAAGAAACCTAGAATGAACGAAAACTGAAATGGAGAAAAAAT-GGAA-ATATTAA---CTAC-T---TGGT-ATATACAATTGGTTTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2239163 99 - 8137123 AACAACTGTAGAAAACCTAAGGAAACCCAGGGAGAACTAAAACCAAAATGGGAAAAAATA-GAAA-ATGTTAACAGCTAT-T---CAGC-ATGTAAAACTGGTTTA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61031722 97 - 77573801 AACAACCACAGAAAAGC--AAGAGACTCAGGATGAACTAAAACCAAAATGGGAAAAAAAT-GAAG-ACATTAA---CAAC-TGTCCACT-ACACAAAATTGGTTTG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=74772.000000 s hg38.chr7_KI270899v1_alt 136606 10 + 190869 CACACTTTTT- s panTro5.chr7_NW_015973580v1_random 10884 10 - 83720 CACACTTTTT- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 526759 10 + 162613886 CACACTTTTT- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 98057 10 - 432965 CACATTTTTT- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 156844 10 + 85365473 CACACTTTTT- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34003555 10 + 185818997 CACACttttt- i rheMac8.chr3 C 0 I 309 s macFas5.chr3 33619527 10 + 192294377 CACACttttt- i macFas5.chr3 C 0 I 309 s macNem1.NW_012019910v1 4386637 10 - 9440265 CACACttttt- i macNem1.NW_012019910v1 C 0 I 358 s cerAty1.NW_012002954v1 16974931 10 - 21915920 CACACTTTTT- i cerAty1.NW_012002954v1 I 305 C 0 s chlSab2.chr28 110693 10 - 21531802 CACACTTTTT- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 142956 10 - 2515279 CACACTTTTT- i manLeu1.NW_012101810v1 C 0 T 6339 s colAng1.NW_012117710v1 300574 10 + 6586416 CACAGTTTTT- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 29571 10 + 138751 TGCCCTTTTT- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 508713 10 - 2125214 CGCCCTTTTT- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2239262 10 - 8137123 CGTACTTTTA- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61031819 9 - 77573801 --TGCCTTTTA i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=343829.000000 s hg38.chr7_KI270899v1_alt 136616 80 + 190869 -----------------AACGTTTTATACATGGCA--CTGCCTGTTAC-CCAGGCCCCGACTC-GGCCC-CTCCCTGGCCTGCTGCCTGCGTTGctcctgcc s panTro5.chr7_NW_015973580v1_random 10894 80 - 83720 -----------------AACGTTTTATACATGGCA--CTGCCTGTTAC-CCAGGCCCCGACTC-GGCCC-CTCCCTGGCCTGCTGCCTGCGTTGctcctgcc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 526769 80 + 162613886 -----------------AACGTTTTATACATGGCA--CTGCCTGTTAC-CCAGGCCCCGACTC-GGCCC-CTCCCTGGCCTGCTGCCTGCGTTGctcctgcc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 98067 80 - 432965 -----------------AACGTTTTATACATGGCA--CTGCCTGTTAC-CCAGGCCCCGACTC-GGCCC-CTCCCTGGCCTGCTGCCTGCGTTGctcctgcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 156854 81 + 85365473 -----------------GATGTTTCATACACGGCA--CTGCCTGTTACTCCAGGCCCCGACTC-GGCCC-CTCCCTGGCCTGCAGTCTGCGTCGctcctgcc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34003874 70 + 185818997 -----------------AATGTTTCACACATGGCA--CTGCCTATTAC-CCAGGCCCCTACTC-GGCCC-CTCCCTGGCCTGCTGTCTGcgt---------- i rheMac8.chr3 I 309 C 0 s macFas5.chr3 33619846 70 + 192294377 -----------------AATGTTTCACACATGGCA--CTGCCTATTAC-CCAGGCCCCTACTC-GGCCC-CTCCCTGGCCTGCTGTCTGcgt---------- i macFas5.chr3 I 309 C 0 s cerAty1.NW_012002954v1 16974941 70 - 21915920 -----------------AATGTTTTACACATGGCA--CTGCCTATTAC-CCAGGCCCCTACTC-GGCCC-CTCCCTGGCCTGCTGTCTGcgt---------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 110703 55 - 21531802 -----------------AATGTTTCACACATGGCA--CTGCCTATTAC-CCAGGCCCCTACTC-GGCCC-CTCCCTG------------------------- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 300584 67 + 6586416 -----------------CATGTTTCACACATGGCA--CTGCCTATTAC-CCAGGCCCCTACTC-GGCCC-CTCCCTGGCCTGCTGTCTG------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 29581 81 + 138751 -----------------AATGTTTCATACATGGCA--CCAGCTGTTAC-CCAGGCCCCTGCTT-GGCCCTCTCCCTGGCCTGCTGTCTGTGTTGctcctgct i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 508723 81 - 2125214 -----------------AATGTTTCATACATGGCA--CCAGCTGTTAC-CCAGGCTCCTGCTC-GGCCCCCTCCCTGGCCTGCTCTCTGCGTTGCTCCCGCT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2239272 79 - 8137123 -------------------AACTGCACAC-TGGCAACCCATCTGCTAC-CCAGGCCCCCGCCA-GTCTC-TCCCGGGGTGTGCAGTCGGAGACACTCCCAGC i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61031828 82 - 77573801 AGCTCCACATTCACAACATCATGCCACACCAGCCA--TTA--TGTCAC-CAGGTCCCCTCCTCAGGTCT-CTCCCTGA---GCTAACTGAA----------- i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 142966 6339 - 2515279 T e macNem1.NW_012019910v1 4386647 358 - 9440265 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=2395.000000 s hg38.chr7_KI270899v1_alt 136696 1 + 190869 c s panTro5.chr7_NW_015973580v1_random 10974 1 - 83720 c i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 526849 1 + 162613886 c i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 98147 1 - 432965 c i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 156935 1 + 85365473 c i nomLeu3.chr20 C 0 C 0 s manLeu1.NW_012101810v1 136627 1 - 2515279 c i manLeu1.NW_012101810v1 T 6339 C 0 s colAng1.NW_012117710v1 300651 1 + 6586416 c i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 29662 1 + 138751 c i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 508804 1 - 2125214 T i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2239352 1 - 8137123 T i otoGar3.GL873611 I 1 C 0 e canFam3.chr6 61031910 0 - 77573801 C e chlSab2.chr28 110758 0 - 21531802 C e cerAty1.NW_012002954v1 16975011 0 - 21915920 C e macNem1.NW_012019910v1 4386647 358 - 9440265 I e macFas5.chr3 33619916 0 + 192294377 C e rheMac8.chr3 34003944 0 + 185818997 C e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=2200706.000000 s hg38.chr7_KI270899v1_alt 136697 295 + 190869 gtcattccctcccctcagcctgc-ttttcctccaaagctctagctaatacctgaaat-gacagcatggatttgcttatttatttattgggctgcccctcatacatacgagctgcaagagggcagggtcgaagcctgtcttgttACAGGGCCCGTGGTGGAGCTGTACAAGTCACACCCTGCCGAGGGGAGCACTCTGCTCACCAGCCGCCTGGAGGGGCACACGTTTC-CCACCCC----ATTCACCCAG-GGGAGACCTTTTTCCGTTGCGTGCAGAGGTTCTGTGTGAGC----TGGA--GGCGGCC s panTro5.chr7_NW_015973580v1_random 10975 295 - 83720 gtcattccctcccctcagcctgc-ttttcctccaaagctctagctaatacctgaaat-gacagcatggatttgcttatttatttattgggctgcccctcatacatacgagctgcaagagggcagggtcgaagcctgtcttgttACAGGGCCCGTCGTGGAGCTGTACAAGTCACACCCTGCCGAGGGGAGCACTCTGCTCACCAGCCGCCTGGAGGGGCACACGTTTC-CCACCCC----ATTCACCCAG-GGGAGACCTTTTTCTGTTGCGTGCAGAGGTTCTGCGTGAGC----TGGA--GGCGGTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 526850 295 + 162613886 gtcattccctcccctcagcctgc-ttttcctccaaagctctagctaatacctgaaat-gacagcatggatttgcttatttatttattgggctgcccctcatacatacgagctgcaagagggcagggtcgaagcctgtcttgttACAGGGCCCGTCGTGGAGCTGTACAAGTCACACCCTGCCGAGGGGAGCACTCTGCTCACCAGCCGCCTGGAGGGGCACACGTTTC-CCACCCC----ATTCACCCAG-GGGAGACCTTTTTCTGTTGCGTGCAGAGGTTCTGCGTGAGC----TGGT--GGCGGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 98148 295 - 432965 gtcattccctcccctcagcctgc-ttttcctccaaagctctagctaatacctgaaat-gacagcatggatttgcttatttatttattgggctgcccctcatacatacgagctgcaagagggcagggTCGAAGCCTGTCTTGTCACAGGGCCCCTGGTGGAGCTGTACAAGTCACACCCTGCCAAGGGGATGACTCTGCTCACCAGCCGCCTGGAGCGGCACACGTTTC-CCACACC----ATTCACCCAG-GGGAGACCTTTTTCCGTTGCATGCAGAGGTTCTGTGTGAGC----TGGA--GGCGGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 156936 296 + 85365473 gtcattccctcgcctcagcctgctttttcctccaaagctctagctggtatctgaaat-gacagcatggatttgcttctttatttattgggctgcccctcatacatacgagctgcaagagggcaggggcgaagcctgtcttgtcacagggcccctagcgGAGCTGTACAAGTCACACCCTGCCGAGGGGAGCACTCTGCTCACCAGCCACCTGGAGAGGCATACGTTTC-CCACCCC----ATTCACCCAG-GGGAGGCCTTTTTCCATTGCGTGCAGAGGTTTTGTGTGAGC----TGGA--GGCGGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34003944 291 + 185818997 --cattccctcccctcagcctgc-ttttcctccaaagctctagctaacacctgaaat-cacagcatggatttgcttattgatttattgggctacccatcgtacacaccagctgcaagagggcagggTCGAAGCCTGTCTCGTCACAGGGCCCCTGGTGGAGCTGAACAAGTCATACCCTGCCGAGCGGAGCACTTTGCTCACCAGCCGCCTGGAGGGGCACACATTTC-CCACCCC----ATTCACCCAG-GGGAGGCCTTTCTCCATTGTGTGCAGAGGTTC--TGTGAGC----TGGA--GGCAGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33619916 291 + 192294377 --cattccctcccctcagcctgc-ttttcctccaaagctctagctaacacctgaaat-cacagcatggatttgcttattgatttattgggctacccatcgtacacaccagctgcaagagggcagggTCGAAGCCTGTCTCGTCACAGGGCCCCTGGTGGAGCTGAACAAGTCATACCCTGCCGAGCGGAGCACTTTGCTCACCAGCCACCTGGAGGGGCACACATTTC-CCACCCC----ATTCACCCAG-GGGAGGCCTTTCTCCATTGTGTGCAGAGGTTC--TGTGAGC----TGGA--GGCAGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4387005 293 - 9440265 GTcattccctcccctcagcctgc-ttttcctccaaagctctagctaacacctgaaat-cacagcatggatttgcttattgatttattgggctacccattgtacacaccagctgcaagagggcagggTCGAAGCCTGTCTCATCACAGGGCCCCTGGTGGAGCTGAACAAGTCATACCCTGCCGAGCGGAGCACTTTGCTCACCAGCCGCCTGGAGGGGCACACGTTTC-CCACCCC----ATTCACCCAG-GGGAGGCCTTTCTCCGTTGTGTGCAGAGGTTC--TGTGAGC----TGGA--GGCAGTC i macNem1.NW_012019910v1 I 358 C 0 s cerAty1.NW_012002954v1 16975011 291 - 21915920 --cattccctcccctcagcctgc-ttttcctccaaagctctagccaacacctgaaat-gacagcatggatttgcttattgatttattgggctacccgtcgtacacaccagctgcaagagggcagggTCGAAGCCTGTCTCGTCACAGGGCCCCTGGCGGAGCTGAACAAGTCATACCCTGCCAAGCGGAGCACTTTGCTCACCAGCCGCCTGGAAGGGCACACGTTTC-CCACCCC----ATTCACCCAG-GGAAGGCCTTTCTCCGTTGTGTGCAGAGGTTC--TGTGAGC----TGGA--GGCAGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 110758 254 - 21531802 ------------------------------------------GCTAACACCTGAAAT-GACAGCATGGACTTGCTTATTGATTTATTGGGCTACCCCTCGTACACACCAGCTACAAGAGGGCAGGGTCAGAGCCTGTCTCCTCACAGGGCCCCTGGCGGAGCTGAACAAGTCATACCCTGCCCAGCGCAGCACTTTGCTCACCAGCCACCTGGAGGGGCACACGTTTC-CCACCCC----ATTCACCCAG-GGGAGGCCTTTCTCCGTTGTGTGCAGAGGTTCTGTGTGAGC----TGGA--GGCAGTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 136628 293 - 2515279 gtcattccctcccctcagcctgc-ttttcctccaaagctctagctaacacctgaaat-gacagcatggatttgcttattgatttattgggctacccgtcgtacacaccagctgcaagagggcagggTCGAAGCCTGTCTCGTCACAGGGCCCCTGGCAGAGCTGAACAAGTCATACCCTGCCGAGCGGAGCACTTTGCTCACCAGCCGCCTGGAGGGGCACACGTTTC-CCACCCC----ATTCACCCAG-GGAAGGCCTTTCTCCGTTGTGTGCAGAGGTTC--TGTGAGC----TGGA--GGCAGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 300652 295 + 6586416 gtcattccctcccctcagcctgc-ttttcctccgaagctctagctaacacctgaaat-gacagcatggatttgcttattgatttattgggctaccccttgtacataccagctgcgagagggcagggTCGAAGCCTGTCTCGTCACAGGGCCCCTGGCGGAGCTGAACAAGTCATACCCTGCCGAGCGGAGCACTCTGCTCACCAGCTGCCTGGAGGGCCACACGCTTC-CCACCCC----ATTCACCCAG-GGGAGGCCTTTCTCCGTTGTGTGCAGAGGTTCTGTGTGAGC----TGGA--GGCGGTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 29663 293 + 138751 gtcattccttccacttaacctgt-gtttcctccaaagctctagctaatacctgaaac-gacagcatggatttgcttccttacttgttgggctgtccctcatacatatgagctgcaagagggcagggtcgaagcctgtcttgtcacagggcccccagtgGAGCTGTACATGTCATGCCCTCCTGAGAGGAGCACTTTGCTCACCAACTGCCTGGAGGGAC--AAGTTTT-CTACCAC----ATTCACCCAG-GGGAGGCCTTTTTCCATTCTGTGCAGAGGTTGTGTGTGAGC----TGGA--GGTGGTC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 508805 289 - 2125214 GTCATTCCTTCCACTTATCCTGT-GTTTCCTCCAAAGCTCTAGCTAATGCCTGAAAC-GACAGCATGGATTTGCTTC----TTTGTTGGGCTGtccctcatacatatgagctgcaagagggcagggttgaagcctgtcttgtcacagggcccccagtgGAGCTGTACATGTCGTGCCCTCCCGAGAGGAGCACTTTGCTCACCAACTGCCTGGAGGGGC--AAGTTTT-CCACCAC----ATTCACCCAG-GGGAGGCCTTTTTCCATTCTGTGCAGAGGTTCTGCATGAGC----TGGA--GGTGGTC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2239353 297 - 8137123 GTCATTCCTGCACCTTCTCTTGC-CTTTTCTCCACAGCTTGTACCAATGCCTACAATGGACAGGATGAATTTGTTTA----TTTGTTGGGGTCCCCC---TACA-GTAAGCTGCCAGAGGGTGAAGATTGAATCTGGCTGGTTACAGGCACCCTA-TGGAGTGGCCCACATCCTGCCCTGTTGAGGGGTGCCATTTGCTCACCAACTGCCCAGTG-GGCTCACGTTTC-CTAGTGCGTTTGTTCGCCCAGAGGGCAGCTTCCTTCCATTTCGTGCAAAGGCCCTGCATGAGCATCGTGGTCCTGTGGTC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61031910 192 - 77573801 ------------------------------------------------ACC---ATT-CCCAACCtttgtttacccattg-tttggtctgctcccgcccctaaatacaaactgcaagagggtgaggacCAAGCCTGTCTTACCCTGGGGC---------------------------------------------------ACACCTGTCTGGAG-TGCACAGGTATCGTCTAGCc----atctccccag-gggagggcttcttccaac-tgcatgaagggtctgtatgagc----taca--ggtggcc i canFam3.chr6 C 0 I 6136 e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=274666.000000 s hg38.chr7_KI270899v1_alt 136992 37 + 190869 ACGGGCCAGTCACACGGATGGTGGCTC-CGGCTGGTGC s panTro5.chr7_NW_015973580v1_random 11270 37 - 83720 ACGGGCCAGTCACACGGATGGTGGCTC-CGGCTGGTGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 527145 37 + 162613886 ACGGGCCAGTCACACGGATGGTGGCTC-CGGCTGGTGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 98443 37 - 432965 ACGGGCCAGTCACACGGATGGTGGCTC-CGGCTGTTGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 157232 37 + 85365473 ACAGGCCAGTCACACGGATGGTGGCTC-CGGCTGGTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34004235 38 + 185818997 ACGGGCCGGTCACACGGATGGTGGCTCACGGTGGGTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33620207 38 + 192294377 ACGGGCCGGTCACACGGATGGTGGCTCACGGTGGGTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4387298 38 - 9440265 ACGGGCCGGTCACACGGATGGTGGCTCACAGTGGGTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16975302 38 - 21915920 ACGGGCCGGTCACATGGATGGTGGCTCACGGTGGGTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 111012 38 - 21531802 ACAGGCCGGTCACACGGATGGTGGCTCACGGTGGGTGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 136921 38 - 2515279 ACGGGCCGGTCACATGGATGGTGGCTCACGGTGGGTGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 300947 38 + 6586416 ACAGGCTGGTCACACGGACGCTGGCTCACGGTGGGTGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 29956 38 + 138751 ACAGGCCAGCCACACAGATGGTGGCTCATGGCTGGTGC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 509094 38 - 2125214 ACAGGCCAGTCACACAGATGGTAGCTCATGGCTGGTGC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2239650 34 - 8137123 ACAGCTCAGTCAC----ATGATGGGTCCTGGTCAGTGC i otoGar3.GL873611 C 0 I 2299 e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=780805.000000 s hg38.chr7_KI270899v1_alt 137029 110 + 190869 CCATCCCTTCATATTCAGGAGAGACGGACTGTCTGTGAGACATTCTCACAGGTGCTCTGGGATACACGCCATGGCTgtacctggcctcaagtggctcatcgtgcttcagg s panTro5.chr7_NW_015973580v1_random 11307 110 - 83720 CCATCCCTTCACATTCAGGAGAGACGGatcgtctgtgagacattctcacaggtgctctgggatacacgccatggctgtacctggcctcaagtggctcatcgtgcttcagg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 527182 110 + 162613886 CCATCCCTTCACATTCAGGAGAGACGGactgtctgtgagacattctcacaggtgctctgggatacacgccatggctgtacctggcctcaagtggctcgtcgtgcttcagg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 98480 110 - 432965 CCATCCCTTCACATTCAGGAGAGACAGACTGTCTGTGAGACATTCTCACGGGTGCTCTGGGATACACGCCATGGCTGTACCTGGCCTCAAGTGGCTCATCGTGCTTCAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 157269 109 + 85365473 CCATCCCTTCACATTCAGGAGAGACAGACTGCCTGTGAGACATTCTCGCAGGTGCTCTGGCATACACGCCATGGCTGTACCTGGCCTCAGGTGGCTCATCATGCTTCA-G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34004273 110 + 185818997 TCATCCCTTCACATTCAGGAGAGACGGACTGCCCGTGAGACATTCTCGCAGGTGCTCTGGCATACACGCCATGGCTGGACCTGGCCTCAAGTGGCTCATCATCCTTCAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33620245 110 + 192294377 TCATCCCTTCACATTCAGGAGAGACGGACTGCCCGTGAGACATTCTCGCAGGTGCTCTGGCATACACGCCATGGCTGGACCTGGCCTCAAGTGGCTCATCATCCTTCAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4387336 110 - 9440265 TCATCCCTTCACATTCAGGAGAGACGGACTGCCCGTGAGACATTCTCGCAGGTGCTCTGGCATACACGCCATGGCTGGACCTGGCCTCAAGTGGCTCATCATCCTTCAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16975340 110 - 21915920 TCATCCCTTCACATTCAGGAGAGACGCACTGCCCGTGAGACATTCTCGCAGGTGCTCTGGCATACACGCCATGGCTGGACCTGGCCTCAAGTGGCTCATCATCCTTCAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 111050 110 - 21531802 TCATCCCTTCACGTTCAGGAGAGACGGACAGCCCGTAAGCCATTCTCGCAGGTGCTCTGGCACACATGCCATGGCCGGACCTGGCCTCAGATGGCTCATCATGCTTCAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 136959 110 - 2515279 TCATCCCTTCACATTCAGGAGAGACGCACTGCCCGTGAGACATTCTCGCAGGTGCTCTGGCATACACGCCATGGCTGGACCTGGCCTCAAGTGGCTCATCATCCTTCAGG i manLeu1.NW_012101810v1 C 0 I 6784 s colAng1.NW_012117710v1 300985 110 + 6586416 TCATCCCTTCACATTCAGGAGAGACGGACTGCCCATGAGACATTCTCGCAGGTGCTCTGGCACACATGCCATGGCTGGACCTGGCCGCAAGTGGCTCATCATGCTTCAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 29994 98 + 138751 TCATCCCTCCACATTCAGGAGAGACCGACTGCCTGAGAGACAT------------TCTGGCATACACACCACAGCTgtacctggcctcaagtggctcgttatacttcggg i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 509132 98 - 2125214 TCATCCCTCCACATTCAGGAGAGACCGACTGCCTGAGAGGCAT------------TCTGGCATACACACCACGGCTgtacctggcctcaagtggctcgtcatacttcagg i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2239684 2299 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=2823878.000000 s hg38.chr7_KI270899v1_alt 137139 403 + 190869 ggatacaaaatggatacacagataactctaatacaaaataaGGTCTGAGGGCAGGAATTTTGGAATATTGTCATATTTGTTTCTAGAGTTATTTTAGAAAAGCTCATATTGTGGGATTTGGATGAAAATTCATCATTACATTCTTAATAGACCGATTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGGTTTGGATAAGGGAATTTGAAA-----TTACCTCAAAGAATAAGCAACAGTTCTAATTTTCATTCCATTTAGGTTCAGA------AAAAGGATGGAGGTAGAAAGTCCTCTCTCCCAAACACT--ATGATTGACACTGCAGAGTTCTGCAACTCTCGTACGAGGGAGATTTCATGATGATCTCAGTAACCGATCAGAGAATCAACGACTGACTTCGCTGAGGCACG s panTro5.chr7_NW_015973580v1_random 11417 403 - 83720 ggatacaaaatggatacacagataactctaatacaaaataaggtctgaGGGCAGGAATTTTGGAATATTGTCATATTTGTTTCTAGAGTTATTTTAGAAAAGCTCATATTGTAGGATTTGGATGAAAATTCATCATTACATTCTTAATAGACCGATTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGGTTTGGATAAGGGAATTTGAAA-----TTACCTCAAAGAATAAGCAACAGTTCTAATTTTCATTCCATTTAGGTTCAGA------AAAAGGATGGAGGTAGAAAGTCCTCTCTCCCAAACACT--ATGATTGACACTGCAGAGTTCTGCAACTCTCGTACGAGGGAGATTTCATGATGATCTCAGTAACGGATCAGAGAATCAACGACTGACTTCGCTGAGGCACG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 527292 403 + 162613886 ggatacaaaatggatacacagataactctaatacaaaataaggtctgaGGGCAGGAATTTTGGAATATTGTCATATTTGTTTCTAGAGTTATTTTAGAAAAGCTCATATTGTAGGATTTGGATGAAAATTCATCATTACATTCTTAATAGACCGATTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGGTTTGGATAAGGGAATTTGAAA-----TTACCTCAAAGAATAAGCAACAGTTCTAATTTTCATTCCATTTAGGTTCAGA------AAAAGGATGGAGGTAGAAAGTCCTCTCTCCCAAACACT--ATGATTGACATTGCAGAGTTCTGCAACTCTCGTACGAGGGAGATTTCATGATGATCTCAGTAACGGATCAGAGAATCAAAGACTGACTTCGCTGAGGCACG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 98590 403 - 432965 GGATACAAAATGGATACACACATAACTCTAAAACAAAATAAAGTCTGAGGGCAGGACTTTTGGAATATTGTCATATTTGTTTCTAGAGTTATTTTAGAACAGCTCATATTGTAGGATTTGGATGAAAATTCATCATTACATTCTTAATAGACCGATTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGGTTTGGATAAGGGAATTTGAAA-----TTACCTCAAAGAATAAGCAACAGTTCTAATTTTCATTCCATTTAGGTTCAGA------AAAAGGATGGAGGTAGAAAGTCCTCTCTCCCAAACACT--ATGATTGACACTGCAGAGTTCTGCAACTCTCGTACGAGGGAGATTTCATGATGATCTCAGTAACGGATCAGAGAATCAACGACTGACTTCGCTGAGGCACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 157378 402 + 85365473 GGATACAAAATGGATACACAAATAATTCTAATACAAAATAAAGTCCGAGGGCAGGAATTTTGGAATATTGTCATACTTGTTTCTAGAGTTATTTTAGAAAAGCTCA-ATTGTGGGATTTGGATGAAAATTCATCATTACATTGTTAATAGACCGACTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGGCTTGGATAAGGGAATTTTAAT-----TTACCTTAAAGAATAAGCAACAGTTCTAATTTTCATTCCATTTAGGTACAGA------AAAAGGATGGAGGTAGAAAGTCCTCTCTCCCAAACACT--ATGATTGACACTGCAGAGTTCTGCAACTCTCGTACAAGGGAGATTTCATGATGATCTCAGTAACAGATCAGAGAATCAACGACTGATTTCGCTGAGGCACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34004383 399 + 185818997 GGATACAAATTGGATACACAAATAATTCTAATTCAAAATAAAGCCCAAGCGCAGGAATTGTGGAATATCATCATACTTGTTTCTAGAGTTATTTTAGAAAAGCTCATATTGTGGGATTTGGAGGAAAAGTCATCATTATATTCTCAGTAGACCAATTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGGTTTGGATACAGGAATTTGAAT-----TT-----AAAGAATAAGCAACAGTTCTGATTTTCGTTCCATATAGGTACAGG------AAAAGCAGGGAGGTAGAAAGTCCTCTCTCCCAAACCCTGCATGATTCACACGGCAGAGTTCTGCAACTCTCGTACAAGGGAGATTTCATGATGAT-TCAGTAACAGATCAGAGGATCAACGACTGACTTCACTGAGGCACG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33620355 399 + 192294377 GGATACAAATTGGATACACAAATAATTCTAATTCAAAATAAAGCCCAAGCGCAGGAATTCTGGAATATCATCATACTTGTTTCTAGAGTTATTTTAGAAAAGCTCATATTGTGGGATTTGGAGGAAAAGTCATCATTATATTCTCAGTAGACCAATTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGGTTTGGATACAGGAATTTGAAT-----TT-----AAAGAATAAGCAACAGTTCTGATTTTCGTTCCATATAGGTACAGG------AAAAGCAGGGAGGTAGAAAGTCCTCTCTCCCAAACCCTGCATGATTCACACGGCAGAGTTCTGCAACTCTCGTACAAGGGAGATTTCATGATGAT-TCAGTAACAGATCAGAGGATCAACGACTGACTTCACTGAGGCACG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4387446 405 - 9440265 GGATACAAATTGGATACACAAATAATTCTAATTCAAAATAAAGCCCACGCGCAGGAATTCTGGAATATCATCATACTTGTTTCTAGAGTTATTTTAGAAAAGCTCATATTGTGGGATTTGGAGGAAAAGTCATCATTATATTCTCAGTAGACCAATTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGGTTTGGATACAGGAATTTGAAT-----TT-----AAAGAATAAGCAACAGTTCTGATTTTCGTTCCATTTAGGTACAGGAAAAGCAAAAGCAGGGAGGTAGAAAGTCCTCTCTCCCAAACCCTGCATGATTCACACGGCAGAGTTCTGCAACTCTCGTACAAGGGAGATTTCATGATGAT-TCAGTAACAGATCAGAGGATCAACGACTGACTTCACTGAGGCACG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16975450 399 - 21915920 GGATACAAATTGGATACACAAATAACTCTAATTCAAAATAAAGCCCGAGCGCAGGAATTCTGGAATATCGTCATACTTGTTTCTAGAGTTATTTTAGAAAAGCTCATATTGTGGGATTTGGAGGAAAAGTCATCATTATATTCTCAGTAGACCAATTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGGTTTGGATACAGGAATTTGAAT-----TT-----AAAGAATAAGCAACAGTTCTGATTTTCGTTCCATTTAGGTACAGG------AAAAGCAGGGAGGTAGAAAGTCCTCTCTCCCAAACCCTGCATGATTCACACGGCAGAGTTCTGCAACTCTCATACGAGGGAGATTTCATGATGAT-TCAGGAACGGATCAGAGGATCAACGACTGACTTCACTGAGGCATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 111160 387 - 21531802 GGATACAAATTAGATACACAAATAACTCTAATTCAAAATAAAGCCCGAGCGCAGGAATTTTGGAATATCGTCATATTTGTTTCTACAGCTATTTTAGAAAAGCTCATATTGTGGGATTTGGAGGAAGAGTCATCATTATATTCTTAATAGACCAATTTGGGGGGCAAACTGGAGTCCTTTTGTAACAC-----TGGATAAGGGAATTTGAAT-----TT-----TAAGAATAAGCAACAGTTCTGATTTTCGTTCCATTTAGGTACAGG------AAAAGCATGGAGGTAGAAAGTCCTCTCTCCCAAACCCTGCATGATTCACACGGCAGAGTCCTGCAACTCTCGTACAAAGGAGATTTCATGATGAT-TCAGTAACGGATCAGAGAATCA-------ACTTCACTGAGGCACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 143853 399 - 2515279 GGATACAAATTGGATACACAAATAACTCTAATTCAAAATAAAGCCCGAGCGCAGGAATTCTGGAATATCGTCATACTTGTTTCTAGAGTTATTTTAGAAAAGCTCATATTGTGGGATTTGGAGGAAGAGTCATCATTATATTCTCAGTAGACCAATTTGGGGGGCAAACTGGAGTCCTTTTGTAACACTGATTTGGATACAGGAATTTGAAT-----TT-----AAAGAATAAGCAACAGTTCTGATTTTCGTTCCATTTAGGTACAGG------AAAAGCAGGGAGGTAGAAAGTCTTCTCTCCCAAACCCTGCATGATTCACACGGCAGAGTTCTGCAACTCTCATACGAGGGAGATTTCATGATGAT-TCAGTAACGGATCAGAGGATCAACGACTGACTTCACTGAGGCATG i manLeu1.NW_012101810v1 I 6784 C 0 s colAng1.NW_012117710v1 301095 400 + 6586416 GGATACAAGTTGGATACACAAATAACTGTAATTCAAAATAAAGCCCGAGCGCAGGAAGTTTGGAATATCGTCATATTTGTTTCTAGAGTTATTTTAGAAAAGCTCATATTGTGGGATTTGGAGGAAAAGTCATCATTATATTCTTAATAGACTGATTTGGGGGGCAAACTGCAGTCCTTTTGTAACACTGGTTTGGATAAGGGAATTTGAAT-----TT-----GAAGAATAAGCAACAGTTCTGATTTTCGCTCCATTTAGCTACAGG------AAAAGCATGGAGGTAGAAAGTCCCCTCTCCCAAACCCTGCATGATTCACACGGCAGAGTTCTGCAACTCTCGTACAAGGGAGATTTCACGATGATCTCAGTAACGGATCAGAGAATCAACGACTGACTTCACTGAGGCACG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 30092 390 + 138751 ggatacaaaatggatacacagataactctaatataaaataaagtataagggcaggaatatgggaatatTGTCTTATTTGTTTCTAGAGTTCTTTTAGAAAAGCTCATATTGAGGGATTTGGATGAAGGGTCATCATTACATTCTTGACAGACTGATTTGGGGAGCAAAGTGGAGTCCTTTCATAACACTGGTTTGGATAAGGGAATTTGAAT-----TT-----AAAGAGTAAACAACAGTTCTAATTTTTATTCC--------ACAGA------AAAAGGATGGAGATAGAAAGTCCTCTCTCCCAAATACT--ATGATTTACACTGCAGAGTTTTGCAACCCTCATACAAGAGTGATTTCATGAAGATCTCAGTAACGGTTCAGAGAATCAACCAGTGATTTCACTGAGGCACG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 509230 403 - 2125214 ggatacaaaatggatacacagataactctaatacaaaataaagtctaagggcaggaatgtgggaatatTGTCATATTTGTTTCTAGAGTTCTTTTAGAAAAGCTCATATTGAGGGATCTGGATGAAGGGTCATCATTACATTCTTGATAGACCCATTTGGGGAGCAAAGTGGAGTCCTTTCGTAACACTGGTTTGGATAAGGGAATGTGAATTTATCTT-----AAAGAATAAGCAACAGTTCTAATTTTCATTCCACTTAGGTACAGA------AAAAGGATGGAGGTAGAAAGTCCTCTCTCCCAAACACT--ATGATTTACACCACAGAGTTTTGCAACTCTCATACAAGAGTGATTTCACGATGATCTCAGTAATGGTTCAGAGAATCAGCCACGGATTTCATTGAGGCATG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2239684 2299 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1120171.000000 s hg38.chr7_KI270899v1_alt 137542 158 + 190869 GTGATG-AAAAGGTCAAGGTGGTCTGGTCTGAGTGAAGTCACAGCAAGAACCCTTGTCCAGGGCCATTCTCACCT-TTGGGGACAGCTC-CTTCCCTGTATGGTCCTCATGTCACTGCACTTTCCTGCCTTGTTTCTTGCTGAAGCCATTATTTCTTAATT s panTro5.chr7_NW_015973580v1_random 11820 158 - 83720 GTGATG-AAAAGGTCAAGGTGGTCTGGTCTGAGTGAAGTCACAGCAAGAACCCTTGTCCAGGGCCATTCTCACCT-TTGGGGACAGCTC-CTTCCCTGTGTGGTCCTCATGTCACTGCACTTTCCTGCCTTGTTTCTTGCTGAAGCCATTATTTCTTAATT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 527695 158 + 162613886 GTGATG-AAAAGGCCAAGGTGGTCTGGTCTGAGTGAAGTCACAGCAAGAACCCTTGTCCAGGGCCATTCTCACCT-TTGGGGACAGCTC-CTTCCCTGTATGGTCCTCATGTCACTGCACTTTCCTGCCTTGTTTCTTGCTGAAGCCATTATTTCTTAATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 98993 158 - 432965 GTGATG-AAAAGGTCAAGGTGGTCTGGTCTGAGCGAGGTCACAGCAAGAACCCTTGTCCAGGACCATTCTCACCT-TTGGGGACAGCTC-CTTCCCTGTATGGTCCTCAAGTCACTGCACTTTCCTGCCTTGTTTCTTGCTGAAGCCATTATTTCTTAATT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 157780 158 + 85365473 GTGATG-AAAAGGTCCAGGTGGTCTGGTCTGAGCGACATCACAGCGAGAACCCTTGTCCAGTGCCATTCTCACCT-TTGGGGACAGCTC-CTTCCCTGTATGGTTCTCATGTCACTGCACTTTCCTGCCTTGTTTCTTGCTGAAGCCATTATTTCTTAATT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34004782 154 + 185818997 GTGATG-AAAAGGTCAGGGTGGTCTGGTCTGAGTGAAGTCACAGCGAGAACGCCTGCTCAGGGCCATTCTCAT----TGGGGACAGCCC-CTTCCCTGGATGGTTCCCAGGT-ACTGCACTTTCCTGCCTTGCTTCTTGCTGAAGCCATTATTTCTTAATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33620754 150 + 192294377 GTGATG-AAAAGGTCAGGGTGGTCTGGTCTGAGTGAAGTCACAGCGAGAACGCCTGCTCAGGGCCATTCTCAT----TGGGGACAGCCC-CTTCCC----TGGTTCCCAGGT-ACTGCACTTTCCTGCCTTGCTTCTTGCTGAAGCCATTATTTCTTAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4387851 154 - 9440265 GTGATG-AAAAGGTCAGGGTGGTCTGGTCTGAGTGAAGTCACAGCGAGAACGCCTGCTCAGGGCCATTCTCAT----TGGGGACAGCCC-CTTCCCTGGATGGTTCCCAGGT-ACTGCACTTTCCTGCCTTGCTTCTTGCTGAAGCCATTATTTCTTAATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16975849 153 - 21915920 GTGATG-AAAAGGTCAGGGTGGTCTGGTCTGAGTGAAGT-ACAGCGAGAACGCCTGCCCAGGGCCATTCTCAT----TGGGGACAGCCC-CTTCCCTGGATGGTTCCCAGGT-ACTGCACTTTCCTGCCTTGCTTCTTGCTGAAGCCATTATTTCTTAATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 111547 157 - 21531802 GTGATG-AAAAGGTCAAGGTGGTCTGGTCTGAGTGAAGTCACAGCGAGAACCCTTGCCCAGGGCCATTCCCACCT-TTGGGGACAGCTC-CTTCCCTGGATGGCTCCCAGGT-ACTGCACTTTCCTGCCTTGTTTCTTGCTGAAGCCATTATTTCTTAATT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144252 153 - 2515279 GGGATG-AAAAGGTCAGGGTGGTCCGGTCTGAGTGAAAT-ACAGCGAGAACGCCTGCCCAGGGCCATTCTCAC----TGGGGACAGCCC-CTTCCCTGGATGGTTCCCAGAT-ACTGCACTTTCCTGCCTTGCTTCTTGCTGAAGCCATTATTTCTTAATT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 301495 151 + 6586416 GTGATG-AAAAGGTCAAGGTGGTCTGTTCTGGATGAAGTCACAGCGAGAACCCTTGTCCAGGGCCATTCTCAT----TAGGGACAGCTC-CTTCCCTGGATGGTTCCCATGT-ACTGCACTTTCCTGCCTTGTTTCTTGCTGAAGCTGTTAT---TTAATT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 30482 158 + 138751 GTGATA-AAAAGATCAAAGTGGTCTGCTCTGAGCGAAGTCACAGAGAGTTCCCTTGTCGAGGGCTATTCTCACTT-CTGGGGACAACTC-CTTCCGTATATGGTTCCCATGTAACTGCACTTTCCTGCCATGTTTCTGGCTGAAGCCATTATTTTTTAATT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 509633 158 - 2125214 GTGATA-AAAAGATCAAAGTGGTCTGCTCTGAGCAAAGTCACAGAGAGTTCCCTTGCCCAGGGCTATTCTCACTT-CTGGGGATAGCTC-CTTCCCTATATGGTTCCCATGTCACTGCACTTTCCTGCCTTGTTTCTGGCTGAAGCTATTATTTTTTAATT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2241983 156 - 8137123 GTGATATAAAAAGTCAAAGTAGGCTGGTCTGGGTGAAGTCACAGTAAGAATCCTAACCCTCTGCCACAGTTACCTCTTTGTGAGGGCTCTTTTTCCAACATGGCTTCCACGTCACTGAATTTTCCTGC-----TTATTGTTAAGTCCACAAATCTTCAGTT i otoGar3.GL873611 I 2299 I 1448 e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1139632.000000 s hg38.chr7_KI270899v1_alt 137700 152 + 190869 CCTTAGTAGATATGCAGAGCGGACATCCCAAAGAAGCTAGAAAAATTGATGAGCAGGGAACAGATCAAATCCTCTCCATCAGTGGAAGGCAATTCACGAGGGAAGAAGGCAAGACCATGGGGTAATTTTTCTGAGACTTGACAATGTTTGCC s panTro5.chr7_NW_015973580v1_random 11978 152 - 83720 CCCTAGTAGATATGCAGAGCGGACATCCCAAAGAAGCTAGAAAAATTGATGAGCAGGGAACAGATCAAATCCTCTCCATCAGTGGAAGGCAATTCATGAGGGAAGAAGGCAAGACCATGGGGTAATTTTTCTGAGACCTGACAATGTTTGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 527853 152 + 162613886 CCCTAGTAGATATGCAGAGCGGACACCCCAAAGAAGCTAGAAAAATTGATGAGCAGGGAACAGATCAAATCCTCTCCATCAGTGGAAGGCAATTCACGAGGGAAGAAGGCAAGACCACGGGGTAATTTTTCTGAGACTTGACAATGTTTGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99151 152 - 432965 CCCTAGTAGATATGCAGAGCAGACATCCCAAAGCAGCTAGAAAAATTGATGAGCAGGGAACAGATCAAATCCTCTCCATCAGTGGAAGGCAATTCACGAGGGAAGAAGGCAAGACCATGGGGTAATTTTTCTGAGACTTGACAATGTTTGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 157938 152 + 85365473 CCCTAGTAGATATGCAGAGTGGACATCCCAAAGAAGCTAGAAGAATTGATGAGCAGGGAACAGATCAAATCCTCTCCACCAGTGGAAGGCAATTCACGAGGAAAGAAGGCAAGACCATGGGGTAATTTTTCTGAGACTTGACAATGTTTGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34004936 152 + 185818997 CCCTGGGAGATATGCAGAGTGGACATCCCAAAGAAGCTAGAAACACTGACGAGCAGGGGACAGATCAAATCCTCTCCATCAGAGGAAGGCAATTCACGAGGAAAGAAGGCAAGACCATGGGGTAATTTTTTTGAGACTTGACAATGTTTGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33620904 152 + 192294377 CCCTGGGAGATATGCAGAGTGGACATCCCAAATAAGCTAGAAACACTGACGAGCAGGGGACAGATCAAATCCTCTCCATCAGAGGAAGGCAATTCACGAGGAAAGAAGGCAAGACCATGGGGTAATTTTTTTGAGACTTGACAATGTTTGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388005 152 - 9440265 CCCTGGGAGATATGCAGAGTGGACATCCCAAAGAAGCTAGAAACACTGACGAGCAGGGGACAGATCAAATCCTCTCCATCAGAGGAAGGCAATTCACGAGGAAAGAAGGCAAGACCATGGGGTAATTTTTTTGAGACTTGACAATGTTTGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976002 152 - 21915920 CCCCAGGAGATATGCAGAGCGGACATCCCAAAGAAGCTAGAAACACTGACGAGTAGGGAACAGATCAAATCCTCTCCATCAGAGGAAGGCAATTCACAAGGAAAGAAGGCAAGACCATGGGGTAATTTTTTTGAGACTTGACAATGTTTGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 111704 152 - 21531802 CCCCAGGTGATATGCAGAGCAGACATCCCAGAGAAGCTAGAAAAATTGACGAGCAGGGAACAGATCAAATCCTCTCCATCAGAGGAAGGCAATTCACGAGGAAAGAAGGCAAGACCATGGGGTAATTTTTTTGAGACTTGACAATGTTTGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144405 152 - 2515279 CCCCAGGAGATACGCAGAGTGGACATCCCAAAGAAGCTAGAAACACTGACGAGCAGGGAACAGATCAAATCCTCTCCATCAGAGGAAGGCAATTCACGAGGAAAGAAGGCAAGACCATGGGGTAATTTTTTTGAGACTTGACAATGTTTGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 301646 152 + 6586416 CCCCAGTAGATATGCACAGCAGATATCCCAAAGAAGCTAGAAAAACTGACGAGCAGGGAACAGATCAAATCCTCTCCATCAGAGGAAGGCAATTCACGAGGAAAGAAGGAAAGACCATGGGGTAATTTTTTTGAGACTTGACAATGTTTGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 30640 149 + 138751 CCCTAGGAGATATGCAGAGCTGACATCCCAAAGCAGCTAGAAAAAT---TGAGCAGGGAATAGATCAAATACTTTCCATCAGTGCAAGGCCATTCATGAGGAAAGAAGCCAAGAACATGGGGTAATTTTTTCAAGACTTGACAATGTTTGCC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 509791 151 - 2125214 CCCTAGGAAATATGCAGAGCTGACATCCCAAAGAAGCTAGAAAAATTGATGAGCAGGAAATAGATCAAATCCTTTCCATCA-TGCAAGGCCATTCACGAGGAAAGAAGCCAAGAACATGGGGTAATTTTTTCGAGATTTGACGATGTTTGCC i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2242139 1448 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=368255.000000 s hg38.chr7_KI270899v1_alt 137852 52 + 190869 AAGTAAATAAATCTGCCATTTAAC-ACTACGATAA-AAGCTGTCATAGCCAGGG s panTro5.chr7_NW_015973580v1_random 12130 52 - 83720 AAGTAAATAAATCTGCCATTTAAC-ACTACGATAA-AAGCTGTCATAGGCAGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528005 52 + 162613886 AAGTAAATAAATCTGCCATTTAAC-ACTACGATAA-AAGCTGTCATAGCCAGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99303 52 - 432965 AAGTAAATAAATCTGCCATTTAAC-ACTGCGATAA-AAGCTGTCATAGCCAGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158090 52 + 85365473 AAGTAAATAAATCTGCCATTTAAC-ACTACGATAA-AAGCTGTCATAGCCAGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34005088 50 + 185818997 AAGTAAATAAATCTGCC--TTAAG-ACTACGATTA-AAACTGTCATCCCCAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621056 50 + 192294377 AAGTAAATAAATCTGCC--TTAAC-ACTACGATTA-AAACTGTCATCCCCAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388157 52 - 9440265 AAGTAAATAAATCTGCCTTTTAAC-ACTACGATTA-AAACTGTCATCCCCAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976154 52 - 21915920 AAGTAAATAAATCTGCCTTTTAAC-ACTACGATTA-AAACTGTCATCCCCAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 111856 52 - 21531802 AAGTAAATAAATCTGCCATTTAAC-ACTATGATAA-AAGCTGTCATCCACAAGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144557 52 - 2515279 AAGTAAATAAATCTGCCTTTTAAC-ACTACGATTA-AAACTGTCATCCCCAGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 301798 52 + 6586416 AAGTAAATAAATCTGTCATTTAAC-ACTACAATAA-AAGCTGTCATCCCCAGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 30789 52 + 138751 AAGTAAATAAATCTGCCATTTAAC-ACTACAATAA-AAACTGTCATCCACAGGA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 509942 52 - 2125214 AAGTAAATAAATCTGCCATTTAAC-ACTACAATAA-AAACTGTCATCCACAGGA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2243587 51 - 8137123 aaaaaaaTACATGTGCAATTTAAAGGCTGCAATAATAAGCTGTTATTTGTG--- i otoGar3.GL873611 I 1448 C 0 e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100422 232 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=497264.000000 s hg38.chr7_KI270899v1_alt 137904 57 + 190869 TATTAGTGACTACTTGAGGTTTGAGGACAATGAAGACAGAGTAAGATAAACATC----------------------------------------CTT s panTro5.chr7_NW_015973580v1_random 12182 57 - 83720 TATTACTGACTACTTGAGGTTTGAGGACAATGAAGACAGAGTAAGATAAACATC----------------------------------------CTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528057 57 + 162613886 TATTAGTGACTACTTGAAGTTTGAGGACAATGAAGACAGAGTAAGATAAACATC----------------------------------------CTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99355 57 - 432965 TATTAGTGACTACTTGAGGTTTGAGGACAATGAAGACAGAATAAGATAAACATC----------------------------------------CTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158142 57 + 85365473 TATTAGTGACTACTTGAGGTTTGAGGACAATGAAGACAGAGTAAAATAAACATC----------------------------------------CTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34005138 57 + 185818997 TATCAGTGACTACTTGAGGTTTGAGGACAATGAAGACACAGTAAGATAAACATC----------------------------------------CTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621106 57 + 192294377 TATCAGTGACTACTTGAGGTTTGAGGACAATGAAGACACAGTAAGATAAACATC----------------------------------------CTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388209 57 - 9440265 TATCAGTGACTACTTGAGGTTTGAGGACAATGAAGACACAGTAAGATAAACATC----------------------------------------CTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976206 57 - 21915920 TATCAGTGACTACTTGAGGTTTGAGGACAACGAAGACACAGTAAGATAAACATC----------------------------------------CTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 111908 97 - 21531802 TATCAGTGACTGCTTGAGGTTTGAGGACAATGAAGACACAGTAAGATAAACATCCTTATACCCAGAAAAGAAACGGAACCAGAAGACAGCCCTTCTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144609 57 - 2515279 TATCAGTGACTACTTGAGGTTTGAGGACAATGAAGACACAGTAAGATAAACATC----------------------------------------CTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 301850 57 + 6586416 TATCAGTGACTACTTGAGGTTTGAGGACAATGAAGACACAGTAAGATAAACATC----------------------------------------CTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 30841 57 + 138751 TATTAGTGACGACTTGAGGTTTGAGGACTATCAAGACAGAGTAAGATAAACATT----------------------------------------CTT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 509994 57 - 2125214 TATTAGTGACGACTTGAGGTTTGGGGACTATAAAGACAGAGTAAGATAAACATT----------------------------------------CTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 100654 57 + 376347 tATCAGTGACGACTTGAGGTCTGGGGACTATAAAGACAGAGTAAGATAAACATT----------------------------------------CTT i aotNan1.NW_018514293v1 I 232 I 68 s otoGar3.GL873611 2243638 52 - 8137123 CAATATTAATTTCTTGAAATTTGAGAATCATGAACACAGA-----ATACATATC----------------------------------------ATA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61032102 6136 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C a score=296723.000000 s hg38.chr7_KI270899v1_alt 137961 61 + 190869 ACTATCCAGAAAAAAAAAACGGAACCAGAAGACAGCGCTTCTTACTATCCACAAAAGAAAT s panTro5.chr7_NW_015973580v1_random 12239 59 - 83720 ACTCTCCAG--AAAAAAAACGGAACCAGAAGACAGTGCTTCTTACTATCCACAAAAGAAAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528114 59 + 162613886 ACTATCCAG--AAAAAAAACGGAACCAGAAGACAGCGCTTCTTACTATCCACAAAAGAAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99412 59 - 432965 ACTATCCAG--AAAAAAAACGGAACCAGAAGACAACGCTTCTTACTATCCACAAAAGAAAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158199 59 + 85365473 ACTATCCAG--AAAAGAAACGGAACCAGAAGACAGCCCTTCTTACCATCCACAAAAGAAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34005195 59 + 185818997 ACTATCCAG--AAAAGAAACAGAACCAGAAGACAGCCCTTCTTACTATCCAGAAAAGAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621163 59 + 192294377 ACTATCCAG--AAAAGAAACAGAACCAGAAGACAGCCCTTCTTACTATCCAGAAAAGAAAT i macFas5.chr3 C 0 I 241 s macNem1.NW_012019910v1 4388266 59 - 9440265 ACTATCCAG--AAAAGAAACAGAACCAGAAGACAGCCCTTCTTACTATCCAGAAAAGAAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976263 59 - 21915920 ACTATCCAG--AAAAGAAACAGAACCAGAAGACAGCCCTTCTCACTATCCAGAAAAGAAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 112005 59 - 21531802 ACTGTCCAG--AAAAGAAACGGAACCAGAAGACAGCCCTTCTTACTGTCCAGAAAAGAAAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144666 59 - 2515279 ACTATCCAG--AAAAGAAACAGAACCAGAAGACAGCCCTTCTTACTATCCAGAAAAGAAAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 301907 59 + 6586416 ACTATCCAG--AAAAGAAACGGAACCAGAAGACAGCCCTTCTTACTATCCAGAAAAGAAAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 30898 22 + 138751 ---------------------------------------CTTAACTATACAAAAAAGAAAC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 510051 22 - 2125214 ---------------------------------------CTTAACTATACAAAAAAGAAAC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2243690 21 - 8137123 -----------------------ATCA----------------ACTACATATAAAGTAAT- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100711 68 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=8666.000000 s hg38.chr7_KI270899v1_alt 138022 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 12298 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528173 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99471 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158258 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34005254 1 + 185818997 G i rheMac8.chr3 C 0 I 241 s macFas5.chr3 33621463 1 + 192294377 G i macFas5.chr3 I 241 C 0 s macNem1.NW_012019910v1 4388325 1 - 9440265 G i macNem1.NW_012019910v1 C 0 I 323 s cerAty1.NW_012002954v1 16976322 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 I 241 s chlSab2.chr28 112064 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144725 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 I 159 s colAng1.NW_012117710v1 301966 1 + 6586416 G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 30920 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 510073 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2243711 1 - 8137123 A i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100711 68 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=179863.000000 s hg38.chr7_KI270899v1_alt 138023 23 + 190869 GAACCGCAAGACAGCCCTTCTTA s panTro5.chr7_NW_015973580v1_random 12299 23 - 83720 GAACCGCAAGACAGCCCTTCTTA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528174 20 + 162613886 GAACCACAAGACAGCC---CTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99472 23 - 432965 GAACCGCAAGACAGCCCTTCTTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158259 23 + 85365473 GAACCGCAAGACGGCACTTCTTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34005496 23 + 185818997 GAACCGCAAGACAGCCCTTCTTA i rheMac8.chr3 I 241 C 0 s macFas5.chr3 33621464 23 + 192294377 GAACCGCAAGACAGCCCTTCTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388649 23 - 9440265 GAACCGCAAGACAGCCCTTCTTA i macNem1.NW_012019910v1 I 323 C 0 s cerAty1.NW_012002954v1 16976564 23 - 21915920 GAACCACAAGACAGCCCTTCTTA i cerAty1.NW_012002954v1 I 241 C 0 s chlSab2.chr28 112065 23 - 21531802 GAACCAGAAGACAGCCCTTCTTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144885 23 - 2515279 GAACCGCAAGACAGCCCTTCTTA i manLeu1.NW_012101810v1 I 159 C 0 s colAng1.NW_012117710v1 301967 23 + 6586416 GAACCAGAAGACAGCCCTTCTTA i colAng1.NW_012117710v1 C 0 I 3080 s calJac3.chrUn_GL286444 30921 23 + 138751 AAACTGCAAGACAGCTCTTTTTA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 510074 23 - 2125214 GAACTGCAAGACAGCCCTTCTTA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2243712 23 - 8137123 TAACTAGAAGGCAACCCTTTTTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100711 68 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=185450.000000 s hg38.chr7_KI270899v1_alt 138046 31 + 190869 TTTTTCTCCATCTTCGATGGTGAGGAAGAAT s panTro5.chr7_NW_015973580v1_random 12322 31 - 83720 TTTTTCTCCATCTTCAATGGTGAGGAAGAAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528194 31 + 162613886 TTTTTCTCCATCTTCGATGGTGAGGAAGAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99495 31 - 432965 CTTTTCTCCATCTTCGATGGTGAGGAAGAAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158282 31 + 85365473 TTTTTCTCCATCTTCGATGGTGAGGAAGAAT i nomLeu3.chr20 C 0 I 3 s rheMac8.chr3 34005519 30 + 185818997 CTTTTCTCCATCTTC-ATGGTGAGGAAGAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621487 30 + 192294377 CTTTTCTCCATCTTC-ATGGTGAGGAAGAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388672 30 - 9440265 CTTTTCTCCATCTTC-ATGGTGAGGAAGAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976587 30 - 21915920 CTTCTCTCCATCTTC-ATGGTGAGGAAGAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 112088 29 - 21531802 C-TTTCTCCATCTTC-ATGGTGAAGAAGAGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144908 30 - 2515279 CTTTTCTCCATCTTC-ATGGTGAGGAAGAGT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 30944 31 + 138751 CTTTTCTCCATCTTCAATGTTCAGGAAGAAT i calJac3.chrUn_GL286444 C 0 I 310 s cebCap1.NW_016107703v1 510097 31 - 2125214 CTTTTCTCCATCTTCAATGGTGAGGAAGAAT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2243735 29 - 8137123 --ATTTCCTACCTTCGACCATAAGAAAAACC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100711 68 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=-14261.000000 s hg38.chr7_KI270899v1_alt 138077 4 + 190869 -AAAA s panTro5.chr7_NW_015973580v1_random 12353 4 - 83720 -TTTA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528225 4 + 162613886 -AAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99526 4 - 432965 -AAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158316 4 + 85365473 -AAAA i nomLeu3.chr20 I 3 C 0 s rheMac8.chr3 34005549 3 + 185818997 --AAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621517 3 + 192294377 --AAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388702 3 - 9440265 --AAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976617 3 - 21915920 --AAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 112117 3 - 21531802 --AAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144938 3 - 2515279 --AAA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 31285 4 + 138751 -aaaa i calJac3.chrUn_GL286444 I 310 C 0 s cebCap1.NW_016107703v1 510128 4 - 2125214 -TTTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2243764 4 - 8137123 GCAA- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 100711 68 + 376347 I e saiBol1.JH378296 347878 0 - 2409723 C a score=1043919.000000 s hg38.chr7_KI270899v1_alt 138081 134 + 190869 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATCAAATTCTATTATCATACACACAAAATATTTACGTGAAACCAGCCACAAAAGAA--TGACAAGGAA----CGCTACT----------------GATTTGTCCATTCTGGGGGATAAGAACACA s panTro5.chr7_NW_015973580v1_random 12357 134 - 83720 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATCAAATTCTATTATCATACACACAAAATATTTACGTGAAACCAGCCACAAAAGAA--CGACAAGGAA----CGCTACT----------------GATTTGTCCATTCTGGGCGATAAGAACACA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528229 134 + 162613886 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATCAAATTCTATTATCATACACACAAAATATTTACGTGAAACCAGCCACAAAAGAA--CAACAAGGAA----CGCTACT----------------GATTTGTCCATTCTGGGCGATAAGAACACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99530 134 - 432965 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATCAAATTCTATTATCATACACACAAAATATTTACGTGAAACCAGCCACAAAAGAA--CGACAAGGAA----CGCTACT----------------GATTTGTCCATTCTGGGCGATAAGAACACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158320 134 + 85365473 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATCAAATTATATTATCATACACACAAAATATTTACCTGAAACCAGCCACAAACGAA--CGACAAGGAA----CGCTACT----------------GATTTGCCCATTCTGGGCGATAAGAACACA i nomLeu3.chr20 C 0 M 100 s rheMac8.chr3 34005552 134 + 185818997 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATCGAATTCTATTATAATACACACAAAATGTTTACGTGAAACCGGCCACAAAAGAA--TGACGAGGAA----CGCTACT----------------GATCTGTCCATTCTGGGCGATAAGAACACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621520 134 + 192294377 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATCGAATTATATTATAATACACACAAAATGTTTACGTGAAACCGGCCACAAAAGAA--TGACGAGGAA----CGCTACT----------------GATCTGTCCATTCTGGGCGATAAGAACACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388705 134 - 9440265 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATCGAATTCTATTATAATACACACAAAATGTTTACATAAAACCAGCCACAAAAGAA--TGACGAGGAA----CGCTACT----------------GATCTGTCCATTCTGGGTGATAAGAACACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976620 134 - 21915920 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATACAATTCTATTATAATACACACAAAATGTTTACGTAAAGCCGGCCACAAAAGAA--TGACGAGGAA----CGCTACT----------------GATCTGTCCATTCTGGGCAATAAGAACACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 112120 134 - 21531802 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATCGAATTCTATTATAATACACACAAAATATTTACATGAAACCGGCCACAAAAGAA--CGACGAGGAA----CGCTACT----------------GATCTGTCCATTCTGGGCCATAAGAACACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 144941 134 - 2515279 AAAAAGTTGCTTTTAAAGTATATTCATTAAAATAGAATTCTATTATAATACACACAAAATGTTTACGTAAAACCGGCCACAAAAGAA--TGACGAGGAA----CGCTACT----------------GATCTGTCCATTCTGGGCGATAAGAACACA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 31289 117 + 138751 aaaaaGTTGCTTTTAAAGTATAATCATTAAAATCAAATTCT-----------------ATATTTATGTGAAACTGGTCACAAAAGAA--TGACAAGGAA----CGCTACT----------------GATTTGTCCATTCTGGGCAATAAGAATACA i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 510132 130 - 2125214 AAAAAGTTGCTTTTAAAGTATAGTCATTAAAATCAAATTCTATTAT----TACACAAAATATTTATGTGAAACTGGCCACAAAAGAA--TGACAAAGAA----CACTACT----------------GATTTGTCCATTCTGGGCAATAAGAATGAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 100779 134 + 376347 AAAAAGTTGCTTTTAAAGTATAGTCATTAAAATCAAATTCTATTATAATACACACAAAATATTTATGTGAAACTGGTCACAAAAGAA--TGACAAAGAA----CGCTACT----------------GATTCGTCCATTCTGGGCAATAAGAACGCA i aotNan1.NW_018514293v1 I 68 C 0 s otoGar3.GL873611 2243768 144 - 8137123 ---AAACTGCTTTTATAGAGTATTTATTAGAATCGAATTCTATTATAAGAC-----AAAGATTTATGTGAAGCTGACCATAAAAGAATGTGACAAGGAACAGTCACTACTTAAGACGGTAAGTTAATACCTGCCAATTCTG----ACAAAAACACA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C a score=-8155.000000 s hg38.chr7_KI270899v1_alt 138215 1 + 190869 -G s panTro5.chr7_NW_015973580v1_random 12491 1 - 83720 -A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528363 1 + 162613886 -A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99664 1 - 432965 -A i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34005686 1 + 185818997 -C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621654 1 + 192294377 -C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388839 1 - 9440265 -C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976754 1 - 21915920 -C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 112254 1 - 21531802 -C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 145075 1 - 2515279 -C i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 31406 1 + 138751 -A i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 510262 1 - 2125214 -A i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 100913 1 + 376347 -A i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2243912 1 - 8137123 G- i otoGar3.GL873611 C 0 I 2 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 158454 100 + 85365473 M a score=1018410.000000 s hg38.chr7_KI270899v1_alt 138216 158 + 190869 ATTCTTATCTCACTCTtgttaaaagaaaacttcagctgaattaaatttaaaggagtttaattgagcaatgaatgatttgcacatcgggcagcccccagaattacagcagattcagagagactccagtgcagccacgtggtggaagatttatagacaaa s panTro5.chr7_NW_015973580v1_random 12492 158 - 83720 ATTCTTATCTTACTGTtgttaaaagaaaacttcagctgaattaaatttaaaggagtttaattgagcaataaatgatttgcacatcgggcagcccccagaattacagcagattcagagagactccagtgcagccacgtggtggaagatttatagacaaa i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528364 158 + 162613886 ATTCTTATCTCACTCTtgttaaaagaaaacttcagctgaattaaatttaaaggagtttaattgagcaatgaatgatttgcacatcgggcagcccccagaattacagcagattcagagagactccagtgcagccacgtggtggaagatttatagacaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99665 158 - 432965 ATTCTTATCTTATTCTtgttaaaagaaaacttcagctgaattaaatttaaatgagtttaattgagcaatgaatgatttgcacatcgggcagcccccagaattacagcagattcagagagactccagtgcagccacgtggtggaagatttacagacaaa i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34005687 158 + 185818997 GTTCTTATCTTACTCTtgttaaaagaaaacttaagctgaattaaatgtaaaggcgtttaattgagcaatgaatgatttgtaaatcgggcagcccccagaattacagcagattcagcgagactccagtgcagccacgtggtggaagatttatagacaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621655 158 + 192294377 GTTCTTATCTTACTCTtgttaaaagaaaacttcagctgaattaaatgtaaaggcgtttaattgagcaatgaatgatttgtaaatcgggcagcccccagaattacagcagattcagcgagactccagtgcagccacgtggtggaagatttatagacaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388840 158 - 9440265 GTTCTTATCTTACTCTtgttaaaagaaaacttcagctgaattaaatgtaaaggcgtttaattgagcaatgaatgatttgtaaatcgggcagcccccagaattacagcagactcagcgagactccagtgcagccacgtggtggaagatttatagacaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976755 158 - 21915920 GTTCTTATCTTACACTtgttaaaagaaaacttcagctgaattaaatgtaaaggtgtttaactgagcaatgaatgatttgtaaatcgggcagcccccagaattacagcagattcagcgagactccagtgcagccacgtggtggaagatttatagacaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 112255 158 - 21531802 GTTCTTATCTTACTCTtgttaaaagaaaacttcagctgaattaaatgtaaaggcatttaattgagcaatgaatgatttgcaaatcgggcagcccccagaattagagcagattcagcgagactccagtacagccacgtggtggaagatttatagacaaa i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 145076 158 - 2515279 GTTCTTATCTTACTCTTCttaaaagaaaacttcagctgaattaaatgtaaaggtgtttaactgagcaatgaatgatttgtaaatcgggcagcccccagaattacagcagattcagcgagactccagtgcagccacgtggtggaagatttatagacaaa i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 31407 158 + 138751 GTTATTATCTTACTCTtgttaaatgaaaacttcagctgaattaaaagtaaaggagtttaactgagcaatgaacaatttgcaactcgggcagccccgagaatcacagctgatttagagagactccagcacagccactaggtggaagacttatagacaaa i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 510263 158 - 2125214 GTTATTATCTTACTCTtgttaaaagaaaacttcagctgaattaaaagtaaaggagtttaactgagcaatgaacgatttgcaaatcgggtagcccctagaatcacagcagatttagagagactccagcacagccactaggtggaagacttatagacaaa i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 100914 158 + 376347 GTTCTTATCTTACTCTtgttaaaggaaaacttcagctgaattaaaagtaaaggagtttaactcagcaatgaacgatttgcaaatcgggcagccccgagaatcacaggagacttagagagactccagcacagccacgaggtggaagacttacagacaaa i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e otoGar3.GL873611 2243913 2 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C e nomLeu3.chr20 158454 100 + 85365473 M a score=561841.000000 s hg38.chr7_KI270899v1_alt 138374 87 + 190869 aaaagg--------------------gaagtgaggtagagaaacacctggattagttacaggttggcatttgccttatttacacacagtttgaacattcagcagtgt s panTro5.chr7_NW_015973580v1_random 12650 87 - 83720 aaaagg--------------------gaagtgaggtagagaaacacctgggttagttacaggttggcatttgccttatttacacacagtttgaacattcagcagtgt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528522 87 + 162613886 aaaggg--------------------gaagtgaggtagagaaacacctgggttagttacaggttggcatttgccttatttacacacagtttgaacattcagcagtgt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99823 87 - 432965 aaaagg--------------------gaagtgaggtagagaaacacctgggtcagttacaggttggcatttgccttatttacacacagtttgaacattcagcagtgt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158554 87 + 85365473 AAAAGg--------------------gaagtgaggtagagaaacacctggatcagttacaggttggcatttgccttatttaaacacagtttgaacattccacagtgt i nomLeu3.chr20 M 100 C 0 s rheMac8.chr3 34005845 87 + 185818997 gaaagg--------------------gaagggaggtacagaagcacctggatcggatacaggttggcatgtgcctcatttaaacacagtttgaacattgagcagtgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621813 87 + 192294377 gaaagg--------------------gaagggaggtacagaagcacctggatcggatacaggttggcatgtgcctcatttaaacacagtttgaacattgagcagtgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4388998 87 - 9440265 gaaagg--------------------gaagggaggtacagaagcacctggatcggatacaggttggcatgtgcctcatttaaacacagtttgaacattcagcagtgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16976913 87 - 21915920 gaaagc--------------------gaagtgaggtacagaagcacctggatcggttacaggttggcatttgcctcatttaaacacagtttgaacattcagcagtgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 112413 85 - 21531802 gaaagg--------------------gaagggaggtacagaagcacctggatcagttacaggttggcatttgccttctttaa--acagtttgaacattcagcagtGT i chlSab2.chr28 C 0 I 2094 s manLeu1.NW_012101810v1 145234 87 - 2515279 gaaagg--------------------gaagtgaggtacagaagcacctggatcggttacaggttggcatttgcctcatttaaacacagtttgaacattcagcagtgt i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 31565 106 + 138751 -aaagggaagtgaggtacagaaatcagaagtgagatacagaaacatcttgatcagttacaggttgccatttgccttacttaaacacggtttgaacactcagcagtgt i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 510421 106 - 2125214 -aaaggtcagtgaggtacagaaatcagaagtgaggtacagaaacatctcaatcagtaacaggttgccatttgccttatttaaacacagtttgaacactcagcagtgt i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 101072 77 + 376347 -aaagg--------------------gaagcgaggtacagaaacatctcgatcagttcca-gttgccatttgcctgatttaaacacggtttgaatactc-------- i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e otoGar3.GL873611 2243913 2 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e saiBol1.JH378296 347878 0 - 2409723 C a score=5222131.000000 s hg38.chr7_KI270899v1_alt 138461 857 + 190869 atgagtgattgaagtacggctgctgggactggccgagactcagcaattgtgacaggtacatactcctaatttaggttttcaatcttgtctacctattaagttaggct-cagtttgttcacagggactccaatacagaagtacggagtccttctcaggccatatttagttcgctttaacaattccccctttttggtcattttatcagttttgagagattgatcgaaacttgagttattgatgtcactgtcaccattggtcttgaaacccactagga---agcagaacagtgagttttgcaaaggtaggaacaaggactgagttgaggataccaccttatgctggaaagtcctgtttgcaagagaaaaacaaaacctggtctattctaggacccatgtgtttccttaaagtcttaattcgattatgtcacatttagcacgaatgatgccattttggttcggtttggtctgttgggacctagtgctcagtccaaaacaatggcctcccatcattttgtttaaaaaattcccccttt---gtcaggttgtcacttaggcaagagtgtgaccaaaacttaggatgttagcgccactctccg-ttactatcattttggatttccagtctcagcatgtcactcatcggtttcggtgtcctcgtggtcacacatttctttcagctcttgtcattccagttgaagagagaccatctgacgttctaaagatggcttcatgcaaacatttaaaacctttgagagaatacagtgcaccagggagactattcttatgactactgagagggttaacaccaagaatttggagtatgctccttagccagggtccccataaaccagaccacctaaactcaaa s panTro5.chr7_NW_015973580v1_random 12737 856 - 83720 atgagtgattgaagtacggctgctgggactggccgagactcagcaattgtgacaggtacatactcctaatttaggttttcaatcttgtctacctattaagttaggct-cagtttgttcacagggactccaatacagaagtacggagtccttctcaggccatatttagttcgctttaacaattccccctttttggtcattttatcagttttgagagattgatcgaaacttgagttattgatgtcactgtcaccattggtcttgaaacccactagga---agcagaacagcgagttttgcaaaggtaggaagaaggactgagttgaggttaccaccttatgctggaaagtcctgtttgcaagagaaaaacaaaacctggtctattctaggacccatgtgtttccttaaagtcttaattcgattgtgtcacatttagcacgaatgatgccattttggtttggtttggtctgttgggacctagtgctcagtccaaaacaatggcctcccatcattttgtttaaaaaattcccccttt---gtcaggttgtcacttaggcaagagtgtgaccaaaacttaggatgttagcgccactctccg-ttactatcattttgggtttccagtctcagcatgtcactcatcggtttcggtgtcctcgtggtcacacatttctttcagctcttgtcattccagttgaagagagaccatctgacgttctaaagatggcttcatgcaaacatttaaaacctttgagagaatacagtgcaccagggagactattcttatgactactgagaggg-taacaccaagaatttggagtatgctccttagccagggtccccataaaccaaaccacctaaactcaaa i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 528609 856 + 162613886 atgagtgattgaagtacggctgctgggactggccgagactcagcaattgtgacaggtacatactcctaatttaggttttcaatcttgtctacctattaagttaggct-cagtttgttcacagggactccaatacagaagtacggagtccttctcaggccatatttagttcactttaacaattccccctttttggtcattttatcagttttgagagattgatcgaaacttgagttattgatgtcactgtcaccattggtcttgaaacccactagga---agcagaacagtgagttttgcaaaggtaggaacaaggactgagttgaggataccaccttatgctggaaagtcctgtttgcaagagaaaaacaaaacctggtctattctaggatccatgtgtttccttaaagtcttaatttgattatgtcacatttagcacgaatgatgccattttggttcggtttggtctgttgggacctagtgctcagtccaaaacaatggcctcccatcattttgtttaaaaaattcccccttt---gtcaggttgtcacttaggcaagagtgtgaccaaaacttaggatgttagcgccactctccg-ttactatcattttgggtttccagtctcagcatgtcactcatcggtttcggtgtcctcgtggtcacacatttctttcagctcttgtcattccagttgaagagagaccatctgacgttctaaagatggcttcatgcaaacatttaaaacctttgagagaatacagtacaccagggagactattcttatgactactgagaggg-taacaccaagaatttggagtatgctccttagccagggtccccataaaccaaaccacctaaactcaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 99910 856 - 432965 atgagtgattgaagtacggctgctgggactggccgagactcagcaattgtgacaggtacatactcctaatttaggttttcaatcttgtctacctattaagttaggct-cagtttgttcacagggactccaatacagaagtacggagtccttctcaggccatatttagttcgctttaacaactccccctttttggtcattttatcagttttgagagattgatcgaaacttgagttattgatgtcactgtcaccattggtcttgaaacccactagga---agcagaacagtgagttttgcaaaggtaggaacaaggactgagttgaggataccaccttatgctggaaagtcctgtttgcaagagaaaaacaaaacctggtctattctaggacccatgtgtttccttaaagtcttaattcgattttgtcacatttagcacgaatgatgccattttggttcggtttggtctgttgggacctagtgctcagtccaaaacaatggcctcccatcattttgttcaaaaaatccccccttt---gtcaggttgtcacttaggcaagagtgtgaccaaaacttaggatgttagcgccactctccg-ttactatcactttgggtttccagtctcagcatgtcactcatcggtttcggtgtcctcgtggtcacacatttctttcagctcttgtcattccagttgaagagagaccatctgatgttctaaagatggtttcatgcaaacatttaaaacctttgagagaacacagtgcagcagggagactattcttatgactactgagaggg-taacaccaagaatttggagtatgctccttacccagggtccccataaaccaaaccacctaacctcaaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 158641 858 + 85365473 atgagtgattgaagtacggctgctgggactggccgagactcagcagttgtaacaggcgcatactcctaatttaggttttcaatcttgtctacctattaagttaggct-cagtttgtccacaaggactccaatgcagaagcatggagtccttctcaggccatatttagttcgctttaacaattccccctttttggtcattttctcagttttgagagattgaccaaaacttgagttactgatgtcactatcaccattggtcttgaaacccactagga---agcagaacagtgagttttgcaaaggtaggaagaagggctgagttgacggtaccacctcattctggaaagtcctgtttgcaagagaaaaacaaaacctggtctattctaggatccatgtgtttcctgaaagtcttaattcgattatgtcacatttagcacgaatgatgccattttggttcagtttggtctgttgggacctagtgctcggtccaaaacaatggcctcccatcattttgtttaaaaaatccccctttt-tggtcaggttctcacttaggcaagagtgtgaccaaaacttaaggtgtcagcgccactctcca-ttactatcattttgggtttccagtctcagcatgtcactcataggttacggtgtcctcgtggtcacacatttctttcagctcttgtcattccagttgaagagagaccatctgacgttctaaagatggcttcgtgcaaacatttaaaacctttgagagaatacagtgcaccagggagactattcttatgactactgagaggg-taacaccaagaatttgaagtatgctccttacccagggtccccataaaccaaaccacctaaactcaag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34005932 857 + 185818997 gtgagtgactgaagtatggctgctgggactggccaagactcagcgattgtgacaggtgcgtattcctaatttaggttttcaatcttgtctgccttttaagttagcct-cagtttgtccacaaggactccaatacagaagtacggagtccttctcgggccatatttagttcgctttaacaattccccctttttggtcattttctcagttttgagagatcgaccataacgtgagttattgatgtcactatcaccattggtcttgaaactcactaggaagcagcagaacagtgagttttgcaaaggtaggaacaaggactgagtggaggataccaccttatgctggaaagtcctgtttgcaacagaaaaacaaaacctggtctgttctaggacccacgtgtttccttaaagtcttaattaaattatgtcacatttagcacgaatgacgccattttggtttggtt-----tgctgggacctagtgctcagtccgaaacaatggcctcccaccattttgttttaaaaattccccccttttggtcaggttctcacttaggcaagagagtgaccaaaacttaggtcatcagcgccactctccg-ttactatcattttgggtttccggtctcagcatgtcactcacgggttatggtgtcctcgtggtcacacatttctttcagctcttgtcattccaggggaagagacaccatttgacattctaaagatggcttcacactaacatttaaaacctttgagagaatccagtgcaccagggagaccattattatgactactgagaggg-caacaccaaggatttggaggatgctccttacccagggtccccgtaaaccaaaccacctcaactcaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33621900 857 + 192294377 gtgagtgactgaagtatggctgctgggactggccaagactcagcgattatgacaggtgcgtattcctaatttaggttttcaatcttgtctgccttttaagttagcct-cagtttgtccacaaggactccaatacagaagtacggagtccttctcgggccatatttagttcgctttaacaattccccctttttggtcattttctcagttttgagagattgaccataacgtgagttattgatgtcactatcaccattggtcttgaaactcactaggaagcagcagaacagtgagttttgcaaaggtaggaacaaggactgagtggaggataccaccttatgctggaaagtcctgtttgcaacagaaaaacaaaacctggtctgttctaggacccacgtgtttccttaaagtcttaattaaattatgtcacatttagcacgaatgacgccattttggtttggtt-----tgctgggacctagtgctcagtccgaaacaatggcctcccaccattttgttttaaaaattccccccttttggtcaggttctcacttaggcaagagagtgaccaaaacttaggtcatcagcgccactctccg-ttactatcattttgggtttccggtctcagcatgtcactcacgggttatggtgtcctcgtggtcacacatttctttcagctcttgtcattccagtggaagagacaccatttgacattctaaagatggcttcacactaacatttaaaacctttgagagaatccagtgcaccagggagaccattattatgactactgagaggg-caacaccaaggatttggaggatgctccttacccagggtccccgtaaaccaaaccacctcaactcaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4389085 862 - 9440265 gtgagtgactgaagtatggctgctgggactggccaagactcagcgattgtgacaggtgcgtattcctaatttaggttttcaatcttgtctgccttttaagttagcct-cagtttgtccacaaggactccaatacagaagtacggagtccttctcgggccatatttagttcgctttaacaattccccctttttggtcattttctcagttttgagagattgaccataacgtgagttattgatgtcactatcagcattggtcttgaaactcactaggaagcagcagaacagtgagttttgcaaaggtaggaacaaggactgagtggaggataccaccttatgctggaaagtcctgtttgcaacagaaaaacaaaacctggtctgttctaggacccacgtgtttccttaaagtcttaattaaattatgtcacatttagcacgaatgacgccattttggtttggtttggtctgctgggacctagtgctcagtccgaaacaatggcctcccaccattttgttttaaaaattccccccttttggtcaggttctcacttaggcaagagagtgaccaaaacttaggtcatcagcgccactctccg-ttactatcattttgggtttccggtctcagcatgtcactcacgggttatggtgtcctcgtggtcacacatttctttcagctcttgtcattccagtggaagagacaccatttgacattctaaagatggcttcacactaacatttaaaacctttgagagaatccagtgcaccagggagaccattattatgactactgagaggg-caacaccaaggatttggaggatgctccttacccagggtccccgtaaaccaaaccacctcaactcaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16977000 853 - 21915920 gtgagtgactgaagtatgactgctgggactggccaagactcagcgattgtgacaagtgcgtattcctaatttaggttttcaatcttgtctgtcttttaagttagcct-cagtttgtccacaaggactccaatacagaagtacggagtccttcttgggccatatttagtttgctttaacaattccccctttttggtcattttctcagttttgagagattgaccataacatgagttattgatgtcactatcaccattggtcttgaaactcactaggaagcagcagaacagcgagttttgcaaaggtaggaacaaggactgagtggaggataccaccttatgctggaaagtcctgtttgcaacagaaaaacaaaacctggtctgttctaggacccacgtgtttccttaaagtcttaattaaattatgtcacatttagcatgaatgacgccattttggtttggtc-----tgctgggacctagtgctcagtccgaaacaatggcctcccaccattttgttttaaaaattccccccttttggtcaggttctcacttaggcaagagagtgaccaaaacttagggtgtcagcgccactctccg-ttactatcattttgggtttccggtctcagcatgtcactcatgggttatggtgtcctcgtggtcacacatttctttcagctcttgtcattccagtggaagagacaccatttgacattctaaagatggcttcacgcaaacatttaaaacctttgaaagaatccagtgcaccagggagac----attatgactactgagaggg-caacaccaaggatttggaagatgctccttacccagggtccccgtaaaccaaaccacctcaactcaaa i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 145321 858 - 2515279 gtgagtgactgaagtatgcctgctggaactggccaagactcagcgattgtgacaagggcgtattcctaatttaggttttcaatcttgtctgccttttaagttagcct-cagtttgtccacaaggactccaatacagaagtacggagtccttcttgggccatatttagttcgctttaacaattccccctttttggtcattttctcagttttgagagattgaccataacatgagttattgatgtcactatcaccattggtcttgaaactcactaggaagcagcagaacagtgagttttgcaaaggtaggaacaaggactgagtggaggataccaccttatgctggaaagtcctgtttgcaacagaaaaacaaaacctggtctgttctaggacccacgtgtttccttaaagtcttaattaaattatgtcacatttagcacgaatgacgccattttggtttggtttggtctgctgggacctagtgctcagtccgaaacaatggcctcccaccattttgttttaaaaattccccccttttggtcaggttctcacttaggcaagagagtgaccaaaacttagggtgtcagcgccactctccg-ttactatcattttgagtttccggtctcagcatgtcactcatgggttatggtgtcctcgtggtcacacatttctttcagctcttgtcattccagtggaagagataccatttgacattctaaagatggcttcacgcaaatatttaaaacctttgagagaatccagtgcaccagggagac----attatgactactgagaggg-caacaccaaggatttggaagatgctccttacccagggtccctgtaaaccaaaccacctcaactcaaa i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 31671 845 + 138751 atgagtgattaaagtatggctgctgggattggccaagactcagctatcattgcaggtgcatactcctaatttaggctttcaatcttgtctacctattaagttaggttgcagtttgtccacaaggactcgaatacagaagtacagagtccttctcaggccacattcagtttgctttaacaattccccctatttggtcattttctcagttttgagagattgaccaaaacttgagttattgatatcactatcaccattggtcctgaaacccatgaggaaac---agaacagtgagttttgcaaaggtaggaacaaggactgagttgagggtaccacgttatgctggaaagtcctgtttgcaaaagaaaaacaaaacctcgtctattctaggacccatgtgtttccctaaaatcttaatccgattgtgtcatatttagcacaaatgatgacactttggtttgg-----tctgttggggcctagtgctcagtccaaaacaatggcctcccataattttgttttaaaaattccccatttttggtcagattctcacgtaggcaagagtgtgaccaaagcttagggcattagcgccactctctgtttaccatcattttgggtttccagtcttagcatgttac-----------agtgttctcagagtcactcatttctttcagcacttgtcattccaattgaagagagatcatttgacattctaaagatgtctacaggcaaacccttaaaacctctgagagaatacagtgcaccagggagagtatcatcatgactactgggaggg-taacaccaagagtttggagtatgctccttacccagggtccccataaaccaaaccacctgaaatcaaa i calJac3.chrUn_GL286444 C 0 I 7 s cebCap1.NW_016107703v1 510527 847 - 2125214 ataagcgattaaagtatggctactgagattggccaagactcagctattatcacaggtgcatacttctaatttaggctttcaatcttgtctacctattaagttcggttgcagtttgtctacaaggactcgaatatagaagtacggagtccttctcaggccatatttag-----ttTAACAattcccccgttttggtcattttctcagttttgagagattgaccaaaacttgagttattgatatcactatcaccattggtcctgaaacccactagggaacagtagaacagtgagttttgcaaaggtaggaacaaggactgagttgagggtaccacgttatgctggaaagtcctgtttgcaaaagaaaaacaaaactcggtctgttctaggacccatgtgtttccctaaaatcttaattcgattatgtcacatttagcacaaatgatgacactttggtttggtttgctctgttggggcctagtgatcagtccaaaacaacagcctcccataattttgttttaaaaattccccctttttggtcagattctcatgtaggcaagagtgtgatgaaagcttggggcattggcgccactctctg-ttaccatcattttgggtttccagtctcagcatgttac-----------agtgtcctcagagtcacacatttctttcagtgtttatcattccaattgaagagagctcatttgacattctaaagatggctacaggcaaacccttaaaacctttgacagaatacagtgcaccagggaggctattatcatgactactgggaggg-caacaccaagagtttggagtatgctccttacccagggtccccataaacgaaaccacctgaaatcaaa i cebCap1.NW_016107703v1 C 0 I 30 s aotNan1.NW_018514293v1 101149 786 + 376347 -----------------ggctgctgggatcggccaacactcagctgttatcacaggcgcagactcctaacctgggctttcagtcttgtctacctattaagttaggtcgcagcttgtccacaaggactcgaatacagaagtacagagtccttctcaggccatatttagttcactttaacaattccccccttttggtcattttctcagttttgagagattaaccaaaacttgagttatagataccactatcaccattggtcctgaagcccactaggaaatagtagaacagtaggttttgcaaaggtaggaacaaggactgagttgagggtaccatgttatgctggaaaatcctgtttgcaaaagaaaaacaaaatctggtctattctaggactcgtgtgtttccctaaaatcttaattcgattatgtcacctttagcacaaatgacgccactttggtttggtttg-tctcttggggcctagtgctcagtccaaaacaatggcctcccataattttgttttaaaaattccccctttttggtcagattctcacgta-gcaagagtgagaccaaagcttagtgcattagcgccactgtctg-tt-ccaccattttgggtttccagtctcagcatgttac-----------ggtgtcctcagagtca----------------------------------------------gacattctaaagatggcgacaggcaaacccttaaaacctttgagagaatacagtgcaccagggaagctattgtcatgactactgggaggg-taacaccaagagtttggagcatgctccttacccagggtccccacaaaccaaaccacccgaaatgaaa i aotNan1.NW_018514293v1 C 0 I 7 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e otoGar3.GL873611 2243913 2 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 112498 2094 - 21531802 I e saiBol1.JH378296 347878 0 - 2409723 C a score=36968.000000 s hg38.chr7_KI270899v1_alt 139318 11 + 190869 tagac-----------------------cattct s panTro5.chr7_NW_015973580v1_random 13593 11 - 83720 tagac-----------------------cattct i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 529465 11 + 162613886 tagac-----------------------cattct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 100766 11 - 432965 tagac-----------------------cattct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 159499 34 + 85365473 tagaccaaagaatgagctagataaagctcattct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34006789 34 + 185818997 tagaccaatgaatgagctagataaagctcattct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33622757 34 + 192294377 tagaccaatgaatgagctagataaagctcattct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4389947 34 - 9440265 tagaccaatgaatgagctagataaagctcattct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16977853 34 - 21915920 tagaccaacgaatgagctagataaagctcattct i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 146179 34 - 2515279 tagaccaacgaatgagctagataaagctcattct i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 32523 11 + 138751 -------aagaatgagct---------------- i calJac3.chrUn_GL286444 I 7 I 15 s aotNan1.NW_018514293v1 101942 11 + 376347 -------aagaatgagcc---------------- i aotNan1.NW_018514293v1 I 7 I 12 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e otoGar3.GL873611 2243913 2 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 112498 2094 - 21531802 I e saiBol1.JH378296 347878 0 - 2409723 C e cebCap1.NW_016107703v1 511374 30 - 2125214 I a score=2045987.000000 s hg38.chr7_KI270899v1_alt 139329 335 + 190869 ttgacttaactcagtggtcttttcgttaattccctacaacagactctctataacacctgatgttttctccataggccttaagtgccagcatctgcacaggtactttcctgtttagccaattctattttttagcataactttcacaagagaatttaacatctgttgtgtagcctttacagtagaatctgctacagagtctaccatgagggatatgtttctagtcattgcctttttaattccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcttggcaatggtctctttaacccatg-----------------------------------ctg------------------------------------------tgggttaagagg s panTro5.chr7_NW_015973580v1_random 13604 335 - 83720 ttgacttaactcagtggtcttttcgttaattccctacaacagactctctataacacctgatgttttctccataggccttaagtgccagcatctgcacaggtactttcctgtttagccaattctattttttagcataactttcacaagagaatttaacatctgttgtgtagcctttacagtagaatctgctacagagtctaccatgagggatatatttctagtcattgcctttttaattccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcttggcaatggtctctttaacccatg-----------------------------------ctg------------------------------------------tgggttaagagg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 529476 333 + 162613886 ttgacttaactcagtggtcttttcgttaattccctacaacagactctctataacacctgatgttttctccacaggccttaagtgccagcatctgcacaggtactttcctgtttagccaattctattttttagcataactttcacaagagaatttaacatctgttgtgtagcctttacattagaatctgctac--agtctaccatgagggatatgtttctagtcattgcctttttaattccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcttggcaatggtctctttaacccatg-----------------------------------ctg------------------------------------------tgggttaagagg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 100777 335 - 432965 ttgacttaactcagtggtcttttcgttaattccctacaacagaatctctataacacctgatgttttctccataggccttaagtgccagcatctgcacaggtactttcctgtttagccaattctattttttagcataactttcacaagagaatttaacatctgttgtgtagcctttacagtagaatctgctacagagtctaccatgaggcatacgtttctagtcattgcctttttaattccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcttggcaatggtctctttcacccatg-----------------------------------ctg------------------------------------------tgggttaagagg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 159533 335 + 85365473 ttgacttaactcagtggtcttttcgttaattccctacaacagaatctctataacacctgatgttttctccatagaccttaagtgccagcgtctgcacaggtacttccctgtttagccaattctattttttagcataactttcacaagagaatttaacatttgttgtgtagcctttacagtagaatctgctatagagtctaccatgagggatacgtttctagtcattgccttttttattccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcctggcaatgttttctttaacccatg-----------------------------------ctc------------------------------------------tgggttaagagg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34006823 401 + 185818997 ttgacttaactcagtgatcttttcgttaattccctacaacagaatctctgtaatacctgatgttttctccataggtcctaagtgccagcagctgcacagatactttcctgtttcgccaattctattatttagcgtaactttcacaagagaatttaacatctgttgtgtagccgctgcagtagaatctgctacagagtctatcttgagggacacgtttctagtcattgccttttgtgttccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcccggcaatgttctctttaacccatggcgtgggttaagaggagcggaccaa-----------tgttctgtttctgaatgattcaatgttctctgtaacccatggcgtgggttaagagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33622791 401 + 192294377 ttgacttaactcagtgatcttttcgttaattccctacaacagaatctctgtaatacctgatgttttctccataggtcctaagtgccagcagctgcacagatactttcctgtttcgccaattctattatttagcgtaactttcacaagagaatttaacatctgttgtgtagccgctgcagtagaatctgctacagagtctatcttgagggacacgtttctagtcattgccttttgtgttccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcccggcaatgttctctttaacccatggcgtgggttaagaggagcggaccaatgttctgtttctg-----------aatgattcaatgttctctgtaacccatggcgtgggttaagagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4389981 401 - 9440265 ttgacttaactcagtgatcttttcgttaattccctacaacagaatctctgtaatacctgatgttttctccataggtcctaagtgccagcagctgcacagatactttcctgtttcgccaattctattatttagcgtaactttcacaagagaatttaacatctgttgtgtagccgttgcagtagaatctgctacagagtctatcttgagggacacgtttctagtcattgccttttgtgttccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcctggcaatgttctctttaacccatggcgtgggttaagaggagcggaccaatgttctgtttctg-----------aatgattcaatgttctctgtaactcatggcgtgggttaagagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16977887 401 - 21915920 ttgacttaactcagtgatcttttcgttaattccctacaacagaatctctgtaatacctgatgttttctccataggtcctaagtgccagcagctgcacagatactttcctgtttagccaattctattatttagtgtaactttcacaagagaatttaacatctgttgtgtagccattgcagtagaatctgctacagagtctatcttgagggacacgtttctagtcattgccttttgtgttccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcccagcaatgttctctttaacccatggcatgggttaagaggagcggaccaatgttctgtttctg-----------aatgattcaatgttctccgtaacccatggcgtgggttaagagg i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 146213 401 - 2515279 ttgacttaactcagtgatcttttcgttaattccctacaacagaatctctgtaatacctgatgttttctccataggtcctaagtgccagcagctgcacagatactttcctgtttagccaattctattatttagtgtaactttcacaagagaatttaacatctgttgtgtagccattgcagtagaatctgctacagagtctatcttgagggacacatttctagtcattgccttttgtgttccaaaccatggaaaaaggacctaacaaatgatgcccttctagaagagggaaggcctcccggcaatgttctctttaacccatggcgtgggttaagaggagcggaccaatgttctgtttctg-----------aatgattcaatgttctctgtaacccatggcgtgggttaagagg i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 32549 331 + 138751 ---acttaactaaatggtctttttgttagttccctacaactgagtctctataatacctgatgttttctccataggtctgaagtgccaggagctgcacagatactttcctgtttagccaattctattatttagcataactttcacaagagaatttaaagtctgtggtacagtctttatggtagaatctgctatagagcctatcatgagggatacatttctaatcattgccttttttattccaaatcatggaaaaaggacctaacaaatgatgcccttctaggagagggtggg-ctcttggcaatgttctctgtaacccatg-----------------------------------atg------------------------------------------tgagttaagagg i calJac3.chrUn_GL286444 I 15 C 0 s cebCap1.NW_016107703v1 511404 334 - 2125214 ctcacttaactaagtggtcttttcattagttccctacaactgagtctctttaatacctgatgttttctccataggtctgaagtgccagtagctgcacagatactttcctgtttagccaattctatcatttaacataactttcacaaaagaatttaaagtctgtggtatagtcctcatggcagaatctgctatagagcctatcaagagggatacatttctaatcattgccctttttattccaaatcacggaaaaaagacctaacaaattatgcccttctagaagaggaaagg-ctcctggcaatgttctctgtaacccatg-----------------------------------atg------------------------------------------tgggttaagagg i cebCap1.NW_016107703v1 I 30 C 0 s aotNan1.NW_018514293v1 101965 329 + 376347 ctcacttaaccaagtggtcttttccttagttccctacaactgagtctctgtgacacctgatgttctctccataggtctaaagtgccaggacctgcacagata-----cagtttagccaattctattatttagcataacttgcacaagagaatttaaagtctgtggtatactctttacagtagaatctgctatagagcctaccatgagggatacatttctaaccattgccctttttattccaaatcatggaaaaaggacctaacaaatgatgcccttctagaagagggaagg-ctcctggcaatgttctctgtaacccatg-----------------------------------atg------------------------------------------tgggttaagagg i aotNan1.NW_018514293v1 I 12 C 0 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e otoGar3.GL873611 2243913 2 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 112498 2094 - 21531802 I e saiBol1.JH378296 347878 0 - 2409723 C a score=3587242.000000 s hg38.chr7_KI270899v1_alt 139664 534 + 190869 agtgaaccaatgttctgcttctgaatgattatgaggcacca-tatgtaccattgaagtttctcacctatgatacactgggccttcatcttt-atctatcaagttataagattatccatgtataaagctggctgcaaagcccttcacaaataaaagtataccccataagtgcacaaaacagacccccttctcacttctgttgttcacagaggcggaagcaa--cggaaaaacattcaaag--ataagagtctcatgatagta-agaagtcttgatccatgatcttcagaaagagctgctcacatcaaggatgccatcttcttctggggagaaacttccctgattagctttaccttaagggtttcaatggatgtagagttccaa-------gagtgaccctgctcagttgtgag-attatgaccccaaggttcaagatcctgatgttttgttgcagtgatgatgccaagggcagcgtttctctgatgttctcagaagatcccatctttgggttctagattgtgaaggggttgattgtcctcagtgaacc-at s panTro5.chr7_NW_015973580v1_random 13939 534 - 83720 agtgaaccaatgttctgcttctgaatgattatgaggcacca-tatgtaccattgaagtttctcacctatgatacactgggccttcatcttt-atctatcaagttataagattatccatgtataaagctggctgcaaagcccttcacaaataaaagtataccccataagtgcacaaaacagacccccttctcacttctgttgttcacagaggcagaagcaa--gggaaaaacattcaaag--ataagagtctcatgatagta-agaagtcttgatccatgatcttcagaaagagctgctcacatcaaggatgccatcttcttctggggagaaacttccctgattagctttaccttaagggtttcaatggatgtacagttccaa-------gagtgaccctgctcagttgtgag-attatgaccccaaggttcaagatcctgatgttttgttgcagtgaggatgccaagggcagcttttctctgatgttctcagaagatcccatctttgggttctagattgtgaaggggttgattgtccttagtgaacc-at i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 529809 534 + 162613886 agtgaaccaatgttctgcttctgaatgattatgaggcacca-tatgtaccattgaagtttctcacctatgatacactgggccttcatcttt-atccatcaagttataagattatccatgtataaagctggctgcaaagcccttcacaaataaaagtataccccataagtgcacaaaacagacccccttctcacttctgttgttcacagaggcagaagcaa--gggaaaaacattcaaag--ataagagtctcatgatagta-agaagtcttgatccatgatcttcagaaagagctgctcacatcaaggatgccatcttcttctggggagaaacttccctgattagctttaccttaagggtttcaatggatgtacagttccaa-------gagtgaccctgctcagttgtgag-attatgaccccaaggttcaagatcctgatgttttgttgcagtgaggatgccaagggcagcttttctctgatgttctcagaagatcccatctttgggttctagattgtgaaggcgttgattgtccttagtgaacc-at i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 101112 534 - 432965 agtgaaccaatgttctgcttctgaatgattatgaggcacca-tatgtaccactgaagtttctcacctatgatacactgggccttcatcttt-atctaccaagttataggattatccatgtataaagctggctgcaaaacccttcacaaataaaagtataccccataagtgcacaaaacagacccccttctcacttctattgttcacagaggcagaagcaa--gggaaaaacattcaaag--ataagagtctcatgacagta-agaagtcttgatccaggatcttcagaaagagctgctcacatcaaggatgccatcttcttctggggagaaacttccctgattagctttaccttaagggtttcaatggatgcacagttccaa-------gagtgaccctgctcagttgtgag-attatgaccccaaggttcaagatcctgatgttttgttgcagtgaggatgccaagggcagcttttctctgatgttctcagaagatcccatctttgggttctagattgtgaaggggttgattgtcctcagtgaacc-at i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 159868 542 + 85365473 agtgaaccaatgttcggtttctgaatgattatgaggcaccg-tatgtaccatttaagtttctcacctatgatacattgggccttcatctttcatctatcaagttataagattatccatgtataaagctggctgcaaaacccttcacaaataaaagtataccccataagtgcacaaaacagacccccttctcacatctattgttcatagaggcagaagcaa--gggaaaaacatttaaag--ataagagtctcatcatagta-agaagtcttgatccatgatcttcagaaagagctgctcacatcaaggatgccaccttcttctggggagaaacttccctggttagctttaccttaagggtttcaatggatgtacagttccaagagtgtggagtgaccctgctcagttgtgag-attatgaccccaaggttcaagatcctgatgttttgttgcagtgaggatgccaagggcagtttttctctgatgttctcagaagatcccatctttgggttctagattgtgaaggggttgattgtcctcagtgaacc-at i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34007224 497 + 185818997 agcggaccaatgttctgtttctgaatgattatgaggcactg-tatgtaccatttaagtttctcacctatgacacattgggccttcatcttttatctatcaagttataagattatccatgtataaagctggctgcaaaatccttcacaaataaaagcataacccataggtgcacacaacagacacccttctcacttctattgt----------------------------------------------tctcatgacagta-agaagtcttgatccatgaccttcggaaagagctgctcacatcgaggatgccatcttcttct-gggagaaacttccctggttaactctaccttaatggtttcaatggatgtacagttccaagagtgtggagcgaccctgctcagttgtgag-attatgaccccaagtttcaagatcctgaggttttgttgcagtgtggatgccaagggcag--tttttctgatgttctcagaagatcccatctttgggttctagactgtaaaggggttgattgtcctcagtgaacc-at i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33623192 497 + 192294377 agcggaccaatgttctgtttctgaatgattatgaggcaccg-tatgtaccatttaagtttctcacctatgacacattgggccttcatcttttatctatcaagttataagattatccatgtataaagctggctgcaaaatccttcacaaataaaagcataacccataggtgcacacaacagacacccttctcacttctattgt----------------------------------------------tctcatgacagta-agaagtcttgatccatgaccttcggaaagagctgctcacatcgaggatgccatcttcttct-gggagaaacttccctggttaactctaccttaatggtttcaatggatgtacagttccaagagtgtggagcgaccctgctcagttgtgag-attatgaccccaagtttcaagatcctgaggttttgttgcagtgtggatgccaagggcag--tttttctgatgttctcagaagatcccatctttgggttctagactgtaaaggggttgattgtcctcagtgaacc-at i macFas5.chr3 C 0 I 305 s macNem1.NW_012019910v1 4390382 497 - 9440265 agcggaccaatgttctgtttctgaatgattatgaggcaccg-tatgtaccatttaaatttctcacctatgacacattgggccttcatcttttatctatcaagttataagattatccatgtatagagctggctgcaaaatccttcacaaataaaagcataacccataggtgcacacaacagacacccttctcacttctattgt----------------------------------------------tctcatgacagta-agaagtcttgatccatgaccttcggaaagagctgctcacatcgaggatgccatcttcttct-gggagaaacttccctggttaactctaccttaatggtttcaatggatgaacagttccaagagtgtggagcgaccctgctcagttgtgag-attatgaccccaagtttcaagatcctgaggttttgttgcagagtggatgccaagggcag--tttttctgatgttctcagaagatcccatctttgggttctagactgtaaaggggttgattgtcctcagtgaacc-at i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16978288 498 - 21915920 agcgaaccaatgttctgtttctgaatgattatgaggcacca-tatgtaccacttaagtttctcacctatgacacattgggccttcatcttttatctatcaagttataagattatccatgtataaagctggctgcaaaatccttcacaaataaaagcataacccataggtgcacacaacagacccccttctcacttctattgt----------------------------------------------tctcatgacagta-agaagtcttgatccatgaccttcggaaagagctgctcacatcaaggatgccatcttcttctggggagaaacttccctggttaactctaccttaatggtttcaatggatgtacagttccaagagtgtggagcgaccctgctcagttgtgag-attatgaccccaagtttcaagatcctgaggttttgttgcagtgtggatgccaagggcag--tttttctgatgttctcagaagatctcatctttgggttctagactgtaaaggggttgattgtcctcagtgaacc-at i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 146614 498 - 2515279 agcggaccaatgttctgtttctgaatgattatgaggcaccg-tatgtaccatttaagtttctcacctatgacacattgggccttcatcttttatctatcaagttataagattatccatgtataaagctggctgcaaaatccttcacaaataaaagcataacccataggtgcacacaacagacccccttctcacttctattgt----------------------------------------------tctcatgacagta-agaagtcttgatccatgaccttcagaaagagctgctcacatcaaggatgccatcttcttctggggagaaacttccgtggttaactctaccttaatggtttcaatggatgtacagttccaagagtgtggagcaaccctgctcagttgtgag-actatgaccccaagtttcaagatcctgaggttttgttgcagtgtggatgccaagggcag--tttttctgatgttctcagaagatcccatctttgggttctagactgtaaaggggttgattgtcctcagtgaacc-at i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 32880 544 + 138751 agtgaaccaatgttctatttctgagtgattatgaggcaatg-tatataccataaaagtttctgacctatggtacattgggtcttcgtcttttatctatcaggttacaagattatccacgtataaagctggctgcaaaatccttcacaaataaaagtatacctcgtaagtgcacacaacaaacccccttctcacttctattgttcatagaggcataagcaagggaaaaaaaaattcaaag--atgagagtctcatgacagtagagaaattttaatccaagatcctcagaaaaatctgttgacatcaaagatgtcatcttcttctggggagaaacttccctggttagctttaccttaagggtttcaatgagtggaccattccaagagtgtgcagtgaccctcctcagctgtgag-attatgaccacaagtttcaagatcctgatgttctattgcagtgtggatggcaagggaagtttttctctgatgttctca-aagatctcatctttgcgttctagactgtgaagggattgattgtccacagtgaacc-at i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 347878 539 - 2409723 agtgaaccaatgttctgtttctgagtg---atgaggcaacattatgtaccattaaagtttctcacctatgatacactgggccttcatctcttatctctcaggttacaagattatccatgtatacagctggctgcaaaatccttcacaaataaaagtatacaccataagtgcacacaacagactcctttctcacttctattgttcacggaggcataa------ggggaaaaaattcaaagatataagagtctcatgacagtagagaagttttaatccaagatcttcaaaaaaatctattgacatcaaagatgccatcttcttctggggagaaacttccctggttagctttaccttaagggtttcaatgaatgtaccgttccaagagtgtggagtgaccctcctcagttgtgag-attatgaccacaaggttcaagatcctgatgtttcattgcagtgtggatggcaagggaagtttttctctgatcttctca-gagatcccatctttgggttctagactgtgaagggattgattgtccttagtaaaccaaa i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 511738 542 - 2125214 agtgaaccaatgttctgtttctgagtgattatgaggcaacattatgtaccattaaagtttctcacctatgatacattgggccttcatcttttatctatcaggttacaagattatccatgtataaagctggctgcaaaatccttcacaaataaaagtataccccataagtgcacacaacagacctccttctcacttctattgttcatagaggcataagcaa--gggaaaaaaattcaaag--ataagagtctcatgatagtagagaagttttaatccaagatcttcagaaaaatctgttgacatcaaagatgtcatcttcttctggggagaaacttccctggttagctttacctt-agggtttcaatgaatgtaccattccaagagtgtggagtgaccctcctcaggtgtgag-attatgaccacaaggttcaagatcctgatgttttattgcagtgtggatggcaagggaagttttcctctgatgttctca-aagattccatctttgggttctaaactgtgaacggattgattgtcctcagtgaaca-at i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 102294 543 + 376347 cgtgaaccaatgttctgtttctgagtcattatgaggcaacactatgtaccattaaagtttctcacctatgatacattgggccttcatcttttatctatcaggttacaagattatccatgcataaagctggctgcaaaatccttcacaaataaaagtataccccgtaagtgcacacaacagacccccttctcacttctattgttcatagaggcataagcaag-ggaaaaaaaattcaaag--ataagagtctcacgacagtagagaagttttaatccaagatcttcagaaaaatctgttgacatcgaagatgtcatcttcttctggggagaaacttccctggttagctttagcttaagggtttcaatgcatgtactgttccaagggtgtggagtgacactcctcagttgtgagccttatgaccac--ggtccaagatcctgatgttttattgcagtgtgcacggcaagggaagtttttctctgatgttctca-aagagcccatctttgggttctagactgtgaagggattgattgtcctcagtgaacc-at i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e otoGar3.GL873611 2243913 2 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 112498 2094 - 21531802 I a score=105284.000000 s hg38.chr7_KI270899v1_alt 140198 13 + 190869 aaaaagctcttta s panTro5.chr7_NW_015973580v1_random 14473 13 - 83720 aaaaagctcttta i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 530343 13 + 162613886 aaaaagctcttta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 101646 13 - 432965 aaaaagctcttta i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 160410 13 + 85365473 aaaaagctcttta i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34007721 13 + 185818997 aaaaagctcttta i rheMac8.chr3 C 0 I 323 s macFas5.chr3 33623994 13 + 192294377 aaaaagctcttta i macFas5.chr3 I 305 C 0 s macNem1.NW_012019910v1 4390879 13 - 9440265 aaaaagctcttta i macNem1.NW_012019910v1 C 0 I 325 s cerAty1.NW_012002954v1 16978786 13 - 21915920 aaaaagctcttta i cerAty1.NW_012002954v1 C 0 I 1426 s manLeu1.NW_012101810v1 147112 13 - 2515279 aaaaagctcttta i manLeu1.NW_012101810v1 C 0 I 322 s calJac3.chrUn_GL286444 33424 13 + 138751 aaaaagctcttca i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 348417 13 - 2409723 aaaaagctcttca i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 512280 13 - 2125214 aaaaagctcttca i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 102837 13 + 376347 aaaaagctcttca i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e otoGar3.GL873611 2243913 2 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 112498 2094 - 21531802 I a score=169858.000000 s hg38.chr7_KI270899v1_alt 140211 55 + 190869 cctggtgaaaatacactgatacatagtaatctactgttataacattagccctcct s panTro5.chr7_NW_015973580v1_random 14486 55 - 83720 cctggtgaaaatacactgaagcatagtaatctactgttataacattagctctcct i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 530356 55 + 162613886 cctggtgaaaatacactgaagcatagtaatctactgttataacattagccctcct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 101659 55 - 432965 cctggtgaaaatacactgaagcatagtaatctactgttataacattagccctcct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 160423 55 + 85365473 cctggtgaaaatacactgaagcatagtaatctactgttataacattagccctcct i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33624007 19 + 192294377 cctggtg-aaatacactgaa----------------------------------- i macFas5.chr3 C 0 C 0 s calJac3.chrUn_GL286444 33437 55 + 138751 cttggtgaaaatacactgaagcataataatctactgttataacattagccctcct i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 348430 55 - 2409723 cctggtgaaaatacactgaagcataataatctactgttataacattagccctcct i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 512293 55 - 2125214 cttggtgaaaatacaatgaagcataataatctactgttataacactagtcctcct i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 102850 55 + 376347 cctggtgaaaatacactgaagcataataatctcctgttacaacattaaccctcct i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 301990 3080 + 6586416 I e otoGar3.GL873611 2243913 2 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 112498 2094 - 21531802 I e manLeu1.NW_012101810v1 147125 322 - 2515279 I e cerAty1.NW_012002954v1 16978799 1426 - 21915920 I e macNem1.NW_012019910v1 4390892 325 - 9440265 I e rheMac8.chr3 34007734 323 + 185818997 I a score=7631970.000000 s hg38.chr7_KI270899v1_alt 140266 931 + 190869 gcatgggaaagctttagtacaaccagaacacatacattgaaaatgacaactgaatgaaacccctttataaatgtttaaatgcctcatcaggtagccaaatgtacatgaagctttgattgacttcccaggagtatgggtttgacaaactaaacattgtttataaactattttaacaatctgtaagtcaccacaccaacatatttaatttggatcattttatcttttccaggatgagtcatggaatgcataacttttaataacaaaagctttaaggactcacgaa----ggacaaggcagccatcttggttctccatgagtccatgcttaacatcggacttatgtcctcttgggtgccagttgtttctccaaattgggcacatagcatggataactgatgggttatcacaggtaatttgacttagaccatggagttcattcaaattgtatatctaaacaatttcagtataggctgattaagtatgcaaacctggtgaagcatttcctcggtattcaattaatttttattctatttgggttagcagttttataagccagtcagtcttttcattaaagtttcagcaattcttacccagtccaaatgatgtgattttgaagttactagaaacctgtattccacagtgc--ttttcagggtcctccccatccgttcacgaacctcctaaaagacaccatgttctaggatttttgtgtgcttgtgaagttttcagaaactacatcagcatgaagcaattaactgcggaaatgactttaaatactcaaaaagacacaattgacaaagaaatttggttat-------------aacaacaac---ataaccataattatgatcggtagcatatactcagaaaaattagaattttagaaatcccatacaactttggaacatatattaatatcattcactaaaatataacctgaagaaggttaa s panTro5.chr7_NW_015973580v1_random 14541 931 - 83720 gcatgggaaagctttaatacaaccagaacacatacattgaaaatgacaactgaatgaaacccctttataaatgtttaaatggctcatcaggtagccaaatgtacatgaagctttgattgacttcccagtagtatgggtttgacaaactaaacattgtttataaacgattttaacaatctataagtcaccacaccaacatatttaatttggatcattttatcttttccaggatgagtcatggaatgcataacttttaataacaaaagctttaaggactcacgaa----ggacaaggcagccgtcttggttctccatgagtccacgcttaacatcggacttatgtcctcttgggtgccagttgtttctccaaattgggcacatagcatggataactgatgggttatcacaggtaatttgacttagaccatggagttcattcaaattgtatatctaaacaatttcagtataggctgattaagtatgcaaacctggtgaagtatttcctcggtattcaattaatttttattctatttgggttagcagttttataagccagtcagtcttttcattaaagtttcagcaattcttacccagtccaaatgatgtgattttgaagttactagaaacctgtattccacagtgc--ttttcagggtcctccccatccgttcacaaacctcctaaaagacaccatgttctaggatttttgtgtgcttgtgaagttttcagaaactacatcagcatgaagcaattaactgcggaaatgactttaaacactcaaaaagacacaactgacaaggaaatttggttat-------------aacaacaac---ataaccataattatgatcggtagcatatactcagaaaaattagaattttagaaatcccatacaactttggaacatatattaatatcattcactaaaatataacctgaagaaggttaa i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 530411 931 + 162613886 gcatgggaaagctttaatacaaccagaacacatacattgaaaatgacaactgaatgaaacccctttataaatgtttaaatggctcatcaggtagccaaatgtacatgaagctttgattgacttcccaggagtatgggtttgacaaactaaacattgtttataaactattttaacaatctataagtcaccacaccaacatatttaatttggattattttatcttttccaggatgagtcatggaatgcataacttttaataacaaaagctttaaggactcacgaa----ggacaaggcagccgtcttggttctccatgagtccacgcttaacattggacttatgtcctcttgggtgccagttgtttctccaaattgggcacatagcatggataactgatgggttatcacaggtaatttgacttagaccatggagttcattcaaattgtatatctaaacaatttcagtataggctgattaagtatgcaaacctgttgaagtatttcctcggtattcaattaatttttattctatttgggttagcagttttataagccaggcagtcttttcattaaagtttcagcaattcttacccagtccaaatgatgtgattttgaagttactagaaacctgtattccacagtgc--ttttcagggtcctccccatccgttcacaaacctcctaaaagacaccatgttctaggatttttgtgtgcttgtgaagttttcagaaactacatcagcatgaagcaattaactgcggaaatgactttaaacactcaaaaagacacaactgacaaggaaatttggttat-------------aacaacaac---ataaccataattatgatcggtagcatatactcagaaaaattagaattttagaaatcccatacaactttggaacatatattaatatcattcactaaaatataacctgaagaaggttaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 101714 934 - 432965 gcatgggaaagctttaatacaaccagaacacatacattgaaaatgacaactgaatgaaacccctttataaatgtttaaatggctcatcaggtagccaaatgtacatgaagctttgattgacttcccaggagtatgggtttgacaaactaaacattgtttataaactattttaacaatttataagtcaccacaccaacatatttaatttggatccttttatcttttccaggatgagtcatggaatgcataacttttaataacaaaagctttaaggactcacgaa----ggacaaggcagctgtcttgattctccatgagtccatgctttacattggacttatgtcctcttgggtgccagttgtttccccaaattgggcgcatagcatggataactgatgggttatcacaggtaatttgacttagaccatggagttcattcaaattgtatatctaaacaatttcagtataggctgattaagtatgcaaacctggtgaagtatttcctcggtattcaattaatttttattctatttgggttagcagttttataagccagtcagtcttttcattaaagtttcagcaattcttacccagtccaaatgatgtgattttgaagttactagaaacctgtattccacagtgc--ttttcagggtcctccccatcctttcacgaacctcctaaaggacaccatgttctaggatttttgtgtgcttgtgaagttttcagaaactacatcagcatgaagcaattaaccgcggaaatgactttaaatactcaaaaagacacaattgacaaggaaatttggttat-------------aataacaacataataaccataattatgatcggtagcatatactcagaaaaattagaattttagaaatcccatacaactttggaacatatattaatatcattcactaaaatataacctgaagaaggttaa i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 160478 943 + 85365473 gcatgggaaagcttttatacaaccagaacacatacactgaaaatgacaactgaatgaaatctctttataaatgtttaaatggctcatcaggtaaccaaatgtacatgaagct----ttgtcttcccaggagtatgggtttgacaaactaaacattgtttataaaccattttaacaatttgtaagtcaccacaccaacatatttaatttggatcattttatcttttccaggattagtcatggaatgcataacttttaataacaaaagctttaaggactcacgaa----ggacaaggcagccatcttggttctccatgagtccatgcttaacatcagacttacgtcctcttgggtgccagttgtttctccaaattgggcgcatagcatggacaactgatgggttcccacaggtaatttaacttagaccatggagttcattcaaattgtatatctaaacaatttcagcactggctgattaagcatgcaaacctggtgaggtattttctcggtattcaattaatttttattctatttgggttagcagttctatcagccagtcagtcttttcattaaagtttctgcaattcttacccagtccaaatgatgtgattttgaagttactagaaacctgtattccactgtgc--ttttcagggtcctccccatcctttcacgaacctcctaaaagacaccatgttctaggatttttgtgcgcttgtgaagttttcagaaactacatcagcatgaagcaattaactgcggaaatgactttaaatactgacaaagacacaattgacaaggaaatttggttatttctgtggttcacaataacaacataataaccataattattattggtagcatatactcagaaaaattagaattctagaaatcccatacaactttggaacatatattaatatcattcactaaaatatgacctgaagaaggtcaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34008057 942 + 185818997 gcatgggaaagctttcatacaaccagaacacatacatttaaaatgacaactgaacgaaatccctttataaatgtttaaatggctcaccaggtagccaaatgtacatgaagct----ttgtcttcccaggaatacgggtttgacaaactaaacattggttataaactattttaaccatttataagtcaccacaccaatgcatttaatttggatcattttatcttttccaggatgagtcatggaatgcataacttctaataacaaaagctttaaggactcaggaa----ggacaaggtggccgttctggttctccatgagtccatgactaacatcagacttatgtgctcttgggtgccagctgtttctccaaattgggtgcataccgtggataactgatgggttaccacaggtaatttgacttagaccacggagttcactcaaattgtatatctaaacaacttcagtattggctgatttagtatgcaaacctggtgaagtatttcctcggtattcaattaacttttattctatttgggttagcagttttataagccagtcagtcttttcattaaagtttcagcaattctcacccagtccaaatgatgggattctgaagttattagaaacctgtattcaacagtgc--ttttcagggtccttcccatcctttcatgaacctcctaaaagacaccatgttctagga-tttcgtgtgcttgtgaaattttcagaaactatatcagcatgaagcaattaactgtggaaatgactgtaaatactcataaagacacacttgacaaggaaatttggttatttctgtggttcacaataacaacttaataaccataattacgaatggtagcatatactcagacaaattagaattttagaaatctcatacaactttggaatatatattaatatcagtcactaaaatataacctgaagaaggttaa i rheMac8.chr3 I 323 C 0 s macFas5.chr3 33624026 942 + 192294377 gcatgggaaagctttcatacaaccagaacacatacatttaaaatgacaactgaacgaaatccctttataaatgtttaaatggctcaccaggtagccaaatgtacatgaagct----ttgtcttcccaggaatacgggtttgacaaactaaacattggttataaactattttaaccatttataagtcaccacaccaatgcatttaatttggatcattttatcttttccaggatgagtcatggaatgcataacttctaataacaaaagctttaaggactcaggaa----gcacaaggtggccgttctggttctccatgagtccatgactaacatcagacttatgtgctcttgggtgccagctgtttctccaaattgggtgcataccgtggataactgatgggttaccacaggtaatttgacttagaccatggagttcactcaaattgtatatctaaacaacttcagtattggctgatttagtatgcaaacctggtgaagtatttcctcggtattcaattaacttttattctatttgggttagcagttttataagccagtcagtcttttcattaaagtttcagcaattcttacccagtccaaatgatgggattctgaagttattagaaatctgtattcaacagtgc--ttttcagggtccttcccatcctttcatgaacctcctaaaagacaccatgttctagga-tttcgtgtgcttgtgaaattttcagaaactatatcagcatgaagcaattaactgtggaaatgactgtaaatactcataaagacacacttgacaaggaaatttggttatttctgtggttcacaataacaacttaataaccataattacgattggtagcatatactcagacaaattagaattttagaaatctcatacaactttggaatatatattaatatcagtcactaaaatataacctgaagaaggttaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4391217 938 - 9440265 gcatgggaaagctttcatacaaccagaacacatacatttaaaatgacaactgaacgaaatccctttataaatgtttaaatggctcaccaggtagccaaatgtacatgaagct----ttgtcttcccaggaatacgggtttgacaaactgaacattggttataaactattttaaccatttataagtcaccacaccaatgcatttaatttggatcattttatcttttccaggatgagtcatggaatgcataacttctaataacaaaagctttaaggactcaggaa----ggacaaggtggccgttctggttctccatgagtccatgactaacatcagacttatgtgctcttgggtgccagctgtttctccaaattgggtgcataccgtggataactgatgggttaccacaggtaatttgacttagaccacggagttcactcaaattgtatatctaaacaacttcagtattggctgatttagtatgcaaacctggtgaagtatttcctcggtattcaattaacttttattctatttgggttagcagttttataagccagtcagtcttttcattaaagtttcagcaattctcacccagtccaaatgatgggattctgaagttattagaaacctgtattcaacagtgc--ttttcagggtccttcccatcctttcatgaacctcctaaaagacaccatgttctagga-tttcgtgtgcttgtgaaattttcagaaactatatcagcatgaagcaattaactgtggaaatgactgtaaatactcataaagacacacttgacaaggaaatttggttatttctgtggttcacaataacaacttaataaccataattacgattggtagcatatact----caaattagaattttagaaatctcatacaactttggaatatatattaatatcagtcactaaaatataacctgaagaaggttaa i macNem1.NW_012019910v1 I 325 C 0 s chlSab2.chr28 114592 938 - 21531802 gcatgggaaagctttcatacaaccagaacacatacatttaaaatgacaactgaacgaaatccctttataaatgtttaaatggctcaccaggtagccaaatgtacgtgaagct----ttgtcttcccaggaatatgggtttgacaaactaaacattggttataaactattttaaccatttataagtcaccacaccaatacatttaattcggatcattttatcttttccgggatgagtcatggaatgcataacttttaataacaaaagctttaaggactcaggaagttgggacaaggcagccattctgcttctccatgagtccatgactaacatcagacttatgtgctcttgggggccagctgtttctccaaattgggtgcacaccgtggataactgatgggttaccacaggtaatttgacttagaccatggagttcactcaaattgtgtatctaaacaacttcagtattggctgatttagcatgcaaacctggtgaagtatttcctcggtattcaattaacttttattctatttaggttagcagttttataagccagtcagtcttttcattaaaatttcagcaattctcacccagtccaaatgatgggattctgaagttattagaaacctgtattcaacagtgc--ttttcagtgtccttcccatcctttcatgaacctcctaaaagacaccatgttctacga-tttcgtgtgcttgtgaagttttcagaaactatatcagcatgaagcaattaactgcggaaatgactgtaaatactcataaagacacaatggacaaggaaatttggttatttctgtggttcacaataac-----aataaccataattatgattggcagcatacactcagataaactagaattttagaaatcccatacaactttggaacataaattagtatcattcactaaaatataacct---gaaggttaa i chlSab2.chr28 I 2094 C 0 s manLeu1.NW_012101810v1 147447 942 - 2515279 gcatgggaaagctttcatacaaccagaacacatacatttaaaatgacaactgaacgaaatccctttataaatgtttaaatggctcaccaggtagccaaatgtacatgaagct----ttgtcttcccaggaatataggtttgacaaactaaacattggttataaactattttaaccatttataagtcaccacaccaatgcatttaatttggatcattttatcttttccgggatgagtcatgcaatgcataacttttaataacaaaagctttaaggactcaggaa----ggacaaggtggccgttctggttctccatgagtccatgactaacatcagacttatgtgctcttgggtgccagttgtttctccaaattgggtgcataccgtggataactgatgggttatcacaggcaatttgacttagaccatggagttcactcaaattgtatatctaaacaacttcagtattggctgatttagtatgcaaacctggtgaagtatttcctcggtattcaattaacttttattctatttgggttagcagttttataagccagtcagtcttttcattaaagtttcagcaattctcacccagtccaaatgatgggattctgaagttattagaaacctgtattcaacagtgc--ttttcagggtccttcccatcctttcatgaacctcctaaaagacaccatgttctagga-tttcgtgtgcttgtgaaattttcagaaactatatcagcatgaagcaattaactgcggaaatgactgtaaatactcataaagacacacttgacaaggaaatttggttatttctgtggttcacaataacaacttaataaccataattacgattggtagcatatactcagacaaattagaattttagaaatcccatacaactttggaatatatattaatatcagtcactaaaatataacctgaagaaggttaa i manLeu1.NW_012101810v1 I 322 C 0 s colAng1.NW_012117710v1 305070 937 + 6586416 gcatgggaaagcttttacacaaccagaacacagacactgaaaatgacaactgaatgaaatctctttataaatgtttaaatggctcaccaggtagccaaatgtacgtgaagctttgattgtcttcccaggaatatgggtttgacaaactaaacattggttataaactattttaacaatttataagtcaccacaccaatacatttaatttggatcattttctcttttccgggaggagtcatggaatgcataacttttaataacaaaagctttaaggactcaggaa----ggacaaggcggccgtcctggttctccatgagtccatgattaacatcggacttatgtgctcttcggtgccagttgtttctccaaattgggtgcataccatggataacggatgggttaccacaggtaatttgacttagaccatggagttcactcaaattgtatatctaaacaacttcagtattggctgatttagcatgcaaacc---tgaagtatttcctcggtattcaattaatttttattctatttgggttagcagttgtataagccagtcagtcttttcatt-aagtttcagcaattctcacccagtccaaatgatgggattctgaagttattagaaacctgtatttaacagtgc--ttttcagggtccttcccatcctttcatgaacctcctaaaagacaccatgttctagga-ttttgtgtgcttgtcaagttttcagaaactacatcagcatgaagcaattaactgcggaaatgactgtaaatactcataaagacacgattgacaagaaaatttggttatttctgtggttcacaataacaacttaataaccataattatgattggtaacatatact----caaattacaattttagaaatcctatacaacttt-gaacatatattaatatcattcgctaaaatataagttgaagaaagttaa i colAng1.NW_012117710v1 I 3080 C 0 s calJac3.chrUn_GL286444 33492 908 + 138751 gcatgggaaagctttcatacaaccagaaaacatacactgaaaatgaaaactgaatgaaatccctttataaatgtttaaatggcccctcaggtagccaaatgtacatgaagct----ttgat--------------agtttgacaaactaaacattggttataaactattttaacaatttataagtcaccacaccaatatatttaatttggatcattttgtcttttcca-gatgagtcatggaatgcacaacgtttaataacaaaagctttaaggattcaggaa----ggacaaggcagctgtcctggttctccatgcatccatgcttaacactggacatacgtcctcttgggtgccaattgtttctccaaattgggtgcacagcatggataactgatgggttaacacaggtaatttgacttagaccatggagttcattcaaattgtgtacctaagcaatttcggtattggctgatttagcatgcaaacctgcttaagtatttccttggtattcaattaatttttgttctttttgggttagcagttttataagc----cagtcttttcattaaagtttcagcaattcttacccggtccaaatgatgtgattttaaagttattagaaacctgcattcaacagtgcttttttcagcatccttcccatcctttcatgagcctcctaaaagacaccatgttctaggc-ttttgtgtgcttgtgaagttttcagaaactacatcagcctgaagcaattaactgaggaaatgactctgagtacttataaagacacaattgacaaggatatttagttac-------------aataacaacataataaccataattatgagtggtagcatatact----caaattagaattttagaaatcccatacaaccctggaacatatattaatattattcactaaaatataacctgaagaaggttaa i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 348485 909 - 2409723 gcatgggaaagctttcatacaaccagaaaacatacactgaaaatgaaaactgaatgaaatctctttataaatgtttaaatggtccctcaggtagccaaatgtacatgatgct----ttgat--------------agtgtgacaaactaaacattggttataaactattttaacaatttataagtcaccacaccaatatatttaatttggatcattttgtctcttcca-gatgagtcatggaatgcacaacttttaataacaaaagctttaaggactcaggaa----ggacaaggcggctgtcctggttctccatgaatgcatgcttaacactggacttagggcctctcgggtgccaactgtttctccaaattgggtgtgtagcatagataactgatgggttaccacaggtaatttgacttagaccatggagtgcattcaaattgagtacctaagcaatttccgtattggctgatttagcatgcaaacctgctgaagtatttccttggtagtcaattaatttttgctctatttgggttagcaattttataagccagtcagtcttttcattaaagtttcagcaattcttacccagtccaaatgatgtgattttaaagttattagaaacctgcattcagcagtgc--ttttcagcgtccttgccatccttttatgaacctcctaaaagaca-catgttctagga-ttttgtgtgcttgtgaagttttcagaaactacatcaacctgaagcaattaactgaggaaatgattctgagtactcataaagacacaatagacaaggatatttagttac-------------aataacaacataataaccataattatgagtggtagcatatact----caaattagaattttagaaatcccatacaactttggaacatatattaatatcattcactaaaatataacctgaagaaggttaa i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 512348 899 - 2125214 gcatggcaaggctttcatacaaccagaaaacatacactgaaaatgaaaactgaatgaaatccctttataaatgtttaaatggcccctcaggtagccaaacgtacgtgatgct----ttgac--------------ggtttgacaaactaaacattggttataaactattttaacaatttattaatcaccacaccaatatatttaatttggatcattttgtcttttcca-gatgagtcatggaatgcacaacttttaataacaaaagctttaa-gattcaggaa----ggacaaggcagctgtcctggttctccatgaatccatgcttaacactggacttacgtcctcttgggtaccaattgcttctccaaattcggtgcatagcatggataactgatgggttaccacaggtaatttgacttagaccatggagttcactcaaattgagtacctaagcaatttcagtattggctgatttagaatgcaaacctgctgaagtatttccttggtatttaattaatttttgttctatttgggttagcaattttataagc----cagtcttttcattaaagtttcagcaattcttacccagtccaaatgatgtgattttaaagttattagaaacctgcattcaacagtgc--ttttcagcatccttgccatcctttcatgaacctcctaaaagacaccatgctctacga-ttttgtgtgcttgtgaagttttcagaaactacatcagcctgaagcaattaactgaggaaatgactctgagtactcacaaagacacaattgacaaggatatttagttac-------------aataacaacataataaccgtaattatgagtggtagcatatact----caaattagaattttagaaatcccatacaactttggaacatatatcag------tcactaaaatataacctgaagaaggttca i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 102905 878 + 376347 gcatgggaaagcttccatacaaccagaaaacatacaatgaaaatgaaaactgaatgaaatccctttataaatgtttaaatggcccctcaggtagccaaatgtacatgacgct----ttgat--------------agtttgacaaactaaacattggttaaaaactattttaacaatttataagtcaccaccccaatacatttaatttggatcattgtgtcctttcca-gatgagtcatggaatgcagcacttttagtaacaaaagctttaaggattcaggaa----ggacaaggcggctgtcctggttctccatgaatccatgcttaacactggacttacgtcctctcgggggccaagcgtttctccaagttgggagcacagcatggataaccgatgggttaccacaggtaatgtgacttagaccacggagttcgttcgaactgtgtacctcagcgatttcagtactggctgattcagcatgcaaacctgctcaagtatttctttggtattcaattaatttttgttctattcgggttagcaattttataagc----cagtcttttcat--aagtttcagcaattcttacccagtccagatgatgtgattttaaagttattagaaacctgcattcaacagtgc--ttttcggcgtcc-tgccaccctttcacggacctcctaaaagacaccatgttctcgga-ttctgtgtgcttgtgaaggtttcagaaactacatcagcctgaagcagttcactgaggaaatgactctgagtaatcataaagacacaattgacaa--------------------------------------cataaccctaatgacgaatggcagcataggct----caaatcagaattttagaaatcccatacaactttggaacgtatgttaatatcattcactaaaatataacctgaagaaggttaa i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2243913 2 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e cerAty1.NW_012002954v1 16978799 1426 - 21915920 I a score=207267.000000 s hg38.chr7_KI270899v1_alt 141197 35 + 190869 a--------ttttttttttgacACTATTCTGTATCGAAAAGTC s panTro5.chr7_NW_015973580v1_random 15472 36 - 83720 at-------ttttttttttgacactattctgtatcgaaaagtc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531342 35 + 162613886 a--------ttttttttttgacactattctgtatcgaaaagtc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102648 34 - 432965 a---------tttttttttgacACTATTCTGTATCGAAAAGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161421 35 + 85365473 a--------ctttttttttgacactactCTGTATCGAAAAGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34008999 43 + 185818997 acttttttttttttttTTGGACACTCTTCTGTTTCAAAAAGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33624968 43 + 192294377 acttttttttttttttTTTGACACTCTTCTGTTTCAAAAAGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4392155 39 - 9440265 ac----tttttttttttttgacACTCTTCTGTTTCAAAAAGTG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 115530 43 - 21531802 actctttttttttttttttgacattcttcTGTTTCAAAAAGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 148389 40 - 2515279 ac---ttttttttttttttgacACTCTTCTGTTTCAAAAAGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 306007 41 + 6586416 ac--ttttttcttctttttgacactattctgtttcgaaaagtg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 34400 34 + 138751 ac---------tttattttGACACCATTCTGTACTGGAAAGTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349394 34 - 2409723 ac---------tttattttgacaccattctgtattgaaatgtc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513247 34 - 2125214 ac---------tttattttgacaccattctgtattgaaaAGTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 103783 34 + 376347 ac---------tttattttgacaccattctgtattgaaaAGTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2243915 35 - 8137123 --------ATATTATTCTCTATTCTTTTTTACATCGAAAAATC i otoGar3.GL873611 I 2 C 0 e canFam3.chr6 61032102 6136 - 77573801 I e cerAty1.NW_012002954v1 16978799 1426 - 21915920 I a score=836174.000000 s hg38.chr7_KI270899v1_alt 141232 101 + 190869 CAAAATGTTTCTTAAAAAGTAACT-AAAAAAA--CACTGGAGTAATTAAAGGACACTTCCTGTGCAGGGGATGG-AAAAATCTCAACAAAAAA-GGAGCGCAGAAG s panTro5.chr7_NW_015973580v1_random 15508 100 - 83720 caaaatatttctCAAAAAGTAACT-AAAAAAA--CACTGGAGTAATTAAAGGACACTTCCTGTGCAGGGGATGG--AAAATCTCAACAAAAAA-GGAGCGCAGAAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531377 100 + 162613886 caaaatatttctCAAAAAGTAACT-AAAAAAA--CACTGGAGTAATTAAAGGACACTTCCTGTGCAGGGGATGG--AAAATCTCAACAAAAAA-GGAGCGCAGAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102682 100 - 432965 CAAAATGTTTCTTAAAAAGTAACT-AAAAAAA--CACTGGAGTAATTAAAGGATACTTCATGTGCAGGAGATGG--AAAATCCCAACAAAAAA-GGAGCGCAGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161456 98 + 85365473 CAAAATGTTTCTTAAAAAGTAACTAAAAAAAA--CACTGGAGTAATTGAAGGACACTTCCTGTGCAGGGGATGG--AAAATCTCAACAAAAA----AGCGCAGAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009042 96 + 185818997 CAAACTGTTTCTTAAAAAG----T-AAAAAAA--CACTGGAGTAATTAAAGGACACTTTCTGTGCAGGGGATGG---AAATCTCAACAAAAAAAGAGGCGCAGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33625011 94 + 192294377 CAAACTGTTTCTTAAAAAG----T-AAAAAAA--CACTGGAGTAATTAAAGGACACTTTCTGTGCAGGGGATGG---AAATCTCAAC--AAAAAGAGGCGCAGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4392194 96 - 9440265 CAAACTGTTTCTTAAAAAG----T-AAAAAAA--CACTGGAGTAATTAAAGGACACTTTCTGTGCAGGGGATGG---AAATCTCAACAAAAAAAGAGGCGCAGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16980225 96 - 21915920 CAAACTGTTTCTTAAAAAG----T-AAAAAAA--CACTGGAGTAATTAAAGGACACTTTCTGTGCAGGGGATGG---AAATCTCAACAAAAAAAGGAGCGCAGAAG i cerAty1.NW_012002954v1 I 1426 C 0 s chlSab2.chr28 115573 95 - 21531802 CAAACTGTTTCTCAAAAAG----T-AAAAAAA--CACTGGAGTAATTAAAGGACACTTTCTGTGCAGGGGATGG---AAATCTCAACAAAAAA-CGGGTGCAGAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 148429 96 - 2515279 CAAACTGTTTCTTAAAAAG----T-AAAAAAA--CATTGGAGTAATTAAAGGACACTTTCTATGCAGGGGATGG---AAATCTCAACAAAAAAGGGGGCGCAGAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 306048 95 + 6586416 caaaatgtttctTTAAAAGCAACT-AAAAAAA--CACTGGAG----TAAAGGACACTTCCTGTGCAGGGGATGG--AAAATCTCAA--AAAAAAGGAGCGCAGAAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 34434 97 + 138751 CAAAATGTTTCTTAAAAAGTGACT-ATAAAAA--CATTGGCA----TAAAGGACACTTCCTGTGCAGGGGATGG-AAAAATCTCAATTAAAAA-GCAGCACAGAAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349428 102 - 2409723 caaAATGTTTCTTAAAAAGTAACT-ATAAAAA--CCTTGGAGTAATTAAAGGACACTTCCTGTGCAGGGGATGGAAAAAATCTCAATTAAAAA-GCAGCACAGAAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513281 101 - 2125214 CAAAATGTTTCTTAAAAAGTAACT-ATAAAAA--CATTGGAGTAATTAAAGGACACTTCCTGTGCAGGGGATGG-AAAAATCTCAATTAAAAA-GCAGCACAGAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 103817 101 + 376347 CAAAATGTTTCTTAAAAAATAACT-ATAATAA--CATTGGAGTAATTAAAGGACACTTCCTGTGCAAGGGATGG-AAAAATCTCAATTAAAAA-GCAGCACAGAAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2243950 85 - 8137123 ------------CAAAAAAT---T-AAAAATAGCCACTGTAG----TAAAGGATTTTTCGTGTGCAGGAGATGG-TAAGTCCACGAAAGAGAAAGGACTGCAAAAG i otoGar3.GL873611 C 0 I 293 e canFam3.chr6 61032102 6136 - 77573801 I a score=301015.000000 s hg38.chr7_KI270899v1_alt 141333 33 + 190869 AGCCTGGCTAGGCGGGAGAACACGGTCAGGCCC s panTro5.chr7_NW_015973580v1_random 15608 33 - 83720 AGCCTGGCTAGGCGGGAGAACACGGTCAGGCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531477 33 + 162613886 AGCCTGGCTAGGCGGGAGAACACGGTCAGGCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102782 33 - 432965 AGCCTGGCTAGGCGGGAGAACACGGTCAGGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161554 33 + 85365473 AGCCTGGCTAGGCGGGAGGACACGGTCAGGCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009138 33 + 185818997 GGCGTGGCCAGGCGGGAGGACATGGCCAGGCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33625105 33 + 192294377 GGCGTGGCCAGGCGGGAGGACATGGCCAGGCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4392290 33 - 9440265 GGCGTGGCCAGGCGGGAGGACATGGCCAGGCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16980321 33 - 21915920 GGCGTGGCCAGGCGGGAGGACATGGCCAGGCCC i cerAty1.NW_012002954v1 C 0 I 30 s chlSab2.chr28 115668 33 - 21531802 GGCGTGGCCAGGCGGGAGGACATGGCCAGGCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 148525 33 - 2515279 GGCGTGGCCAGGCGGGAGGACATGGCCAGGCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 306143 33 + 6586416 GGCGTGGTCAGGCGGGAGGACATTGCCTGGCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 34531 33 + 138751 TGCCTGGCCAAGAGGGAGGATATGGCCAGGCCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349530 33 - 2409723 TGCCTGGCCAGGCGGGAGGATATGGCCAGGCCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513382 33 - 2125214 TGCCTGCCCAGGCGGGAGGATATGGCCAGGCCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 103918 33 + 376347 TGCGTGGCCCGCCGGGAGGATACGGCCAGGCCC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2244035 293 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I a score=72568.000000 s hg38.chr7_KI270899v1_alt 141366 14 + 190869 GCAGGAGAC-GCCGC s panTro5.chr7_NW_015973580v1_random 15641 14 - 83720 GCAGGAGAC-GCGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531510 14 + 162613886 GCAGGAGAC-GCGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102815 14 - 432965 GCAGGAGAC-GCGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161587 14 + 85365473 GCAGGAGAC-GCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009171 14 + 185818997 CCAAGCGAC-GCGAG i rheMac8.chr3 C 0 I 16 s macFas5.chr3 33625138 14 + 192294377 CCAAGCGAC-GCGAG i macFas5.chr3 C 0 I 16 s macNem1.NW_012019910v1 4392323 14 - 9440265 CCAAGCGAC-GCGAG i macNem1.NW_012019910v1 C 0 I 16 s chlSab2.chr28 115701 14 - 21531802 CCAAGAGAC-GCGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 148558 14 - 2515279 CCAAGCGAC-GCGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 306176 14 + 6586416 CCAGGCGAC-AGGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 34564 14 + 138751 CTAGGCGAC-GCGGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349563 15 - 2409723 GCAGGCGACTGCAGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513415 14 - 2125214 GTAGGCGAC-GCGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 103951 14 + 376347 GTAGGCGAC-GCGGC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2244035 293 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e cerAty1.NW_012002954v1 16980354 30 - 21915920 I a score=12000.000000 s hg38.chr7_KI270899v1_alt 141380 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 15655 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531524 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102829 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161601 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009201 1 + 185818997 G i rheMac8.chr3 I 16 C 0 s macFas5.chr3 33625168 1 + 192294377 G i macFas5.chr3 I 16 C 0 s macNem1.NW_012019910v1 4392353 1 - 9440265 G i macNem1.NW_012019910v1 I 16 C 0 s cerAty1.NW_012002954v1 16980384 1 - 21915920 G i cerAty1.NW_012002954v1 I 30 C 0 s chlSab2.chr28 115715 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 148572 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 306190 1 + 6586416 G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 34578 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349578 1 - 2409723 G i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513429 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 103965 1 + 376347 G i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2244035 293 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I a score=66776.000000 s hg38.chr7_KI270899v1_alt 141381 5 + 190869 GCACC s panTro5.chr7_NW_015973580v1_random 15656 5 - 83720 GCACC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531525 5 + 162613886 GCACC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102830 5 - 432965 GCACC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161602 5 + 85365473 GCACC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009202 5 + 185818997 GCACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33625169 5 + 192294377 GCACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4392354 5 - 9440265 GCACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16980385 5 - 21915920 GCACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 115716 5 - 21531802 GCACC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 148573 5 - 2515279 GCACC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 306191 5 + 6586416 GCACC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 34579 5 + 138751 GCACC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349579 5 - 2409723 GCACC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513430 5 - 2125214 GCACC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 103966 5 + 376347 GCACC i aotNan1.NW_018514293v1 C 0 I 449 s otoGar3.GL873611 2244328 5 - 8137123 GCACC i otoGar3.GL873611 I 293 C 0 e canFam3.chr6 61032102 6136 - 77573801 I a score=156361.000000 s hg38.chr7_KI270899v1_alt 141386 23 + 190869 TGCCAG----------------AAAGAGAGCCGCAGGCC s panTro5.chr7_NW_015973580v1_random 15661 23 - 83720 TGCCAG----------------AAAAAGACCCGCAGGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531530 23 + 162613886 TGCCAG----------------AAAAAGACCCGCAGGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102835 23 - 432965 TGCCAG----------------AAAGAGACCCGCAGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161607 23 + 85365473 TGCCAG----------------AAAGAGACCCGCAGGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009207 23 + 185818997 TGCCAG----------------AAAGAGACCCGCAGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33625174 23 + 192294377 TGCCAG----------------AAAGAGACCCGCAGGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4392359 23 - 9440265 TGCCAG----------------AAAGAGACCCGCAGGCC i macNem1.NW_012019910v1 C 0 I 143 s cerAty1.NW_012002954v1 16980390 23 - 21915920 TGCCAG----------------AAAGAGACCCGCAGGCC i cerAty1.NW_012002954v1 C 0 I 168 s chlSab2.chr28 115721 21 - 21531802 TGCCAG------------------AGAGACCCGCAGGCC i chlSab2.chr28 C 0 I 143 s manLeu1.NW_012101810v1 148578 39 - 2515279 TGCCAGAGACGGCACCTGCCAGAAAGAGACCCGCAGGCC i manLeu1.NW_012101810v1 C 0 I 175 s colAng1.NW_012117710v1 306196 23 + 6586416 TGCCCG----------------AAAGAGACCCGCAGGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 34584 22 + 138751 -AGTCG----------------AAGGAGGCCGGCAGGCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349584 22 - 2409723 -AGCTG----------------AAGAAGGCCGGCAGGCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513435 22 - 2125214 -AGTTG----------------AAGGAGGCCAGCAGGCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2244333 21 - 8137123 TGTGAA----------------AGGGAAGACCCCAGG-- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 103971 449 + 376347 I a score=17859.000000 s hg38.chr7_KI270899v1_alt 141409 8 + 190869 AAGACCAG s panTro5.chr7_NW_015973580v1_random 15684 8 - 83720 AAGCCCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531553 8 + 162613886 AAGCCCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102858 8 - 432965 AAGCCCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161630 8 + 85365473 AAGCCCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009230 3 + 185818997 -----CAG i rheMac8.chr3 C 0 I 5 s macFas5.chr3 33625197 3 + 192294377 -----CAG i macFas5.chr3 C 0 I 5 s colAng1.NW_012117710v1 306219 3 + 6586416 -----CAG i colAng1.NW_012117710v1 C 0 I 5 s calJac3.chrUn_GL286444 34606 8 + 138751 AAGCCCAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349606 8 - 2409723 AAGGTCAT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513457 8 - 2125214 AAGCCCAT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2244354 8 - 8137123 AAGTCCGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 115742 143 - 21531802 I e manLeu1.NW_012101810v1 148617 175 - 2515279 I e cerAty1.NW_012002954v1 16980413 168 - 21915920 I e macNem1.NW_012019910v1 4392382 143 - 9440265 I e aotNan1.NW_018514293v1 103971 449 + 376347 I a score=30897.000000 s hg38.chr7_KI270899v1_alt 141417 6 + 190869 GAGACG s panTro5.chr7_NW_015973580v1_random 15692 6 - 83720 GAGAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531561 6 + 162613886 GAGAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102866 6 - 432965 GAGACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161638 6 + 85365473 GAGACG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009238 6 + 185818997 GAGACG i rheMac8.chr3 I 5 C 0 s macFas5.chr3 33625205 6 + 192294377 GAGACG i macFas5.chr3 I 5 C 0 s cerAty1.NW_012002954v1 16980581 6 - 21915920 GAGACG i cerAty1.NW_012002954v1 I 168 C 0 s colAng1.NW_012117710v1 306227 6 + 6586416 GAGACG i colAng1.NW_012117710v1 I 5 I 1046 s calJac3.chrUn_GL286444 34614 6 + 138751 GAAACG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349614 6 - 2409723 GAGACG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513465 6 - 2125214 GAAACT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2244362 5 - 8137123 -GAACG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 115742 143 - 21531802 I e manLeu1.NW_012101810v1 148617 175 - 2515279 I e macNem1.NW_012019910v1 4392382 143 - 9440265 I e aotNan1.NW_018514293v1 103971 449 + 376347 I a score=68237.000000 s hg38.chr7_KI270899v1_alt 141423 24 + 190869 CGAGAGAGGTGGGCAGGGCTGCCC------------ s panTro5.chr7_NW_015973580v1_random 15698 24 - 83720 CGAGAGACGTGGGCAGGGCTGCCC------------ i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531567 24 + 162613886 CGAGAGAGGTGGGCAGGGCTGCCC------------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102872 24 - 432965 CGAGGGAGGTGGGCAGGGCTGCCC------------ i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161644 24 + 85365473 CGAGCGAGGAAGGCAAAGATGCCC------------ i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009244 24 + 185818997 CGGGGGAGGAGCGCAGGGCGGCCC------------ i rheMac8.chr3 C 0 I 73 s macFas5.chr3 33625211 24 + 192294377 CGGGGGAGGAGCGCAGGGCGGCCC------------ i macFas5.chr3 C 0 I 13 s cerAty1.NW_012002954v1 16980587 24 - 21915920 CGGGAGAGGAGCGCAGGGCTGCCC------------ i cerAty1.NW_012002954v1 C 0 C 0 s calJac3.chrUn_GL286444 34620 20 + 138751 ----CGAGGAGGGCTGGGCTGCCC------------ i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349620 20 - 2409723 ----CGAGGAGGCCCGGGCTGCCC------------ i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513471 20 - 2125214 ----CGAGGAGGGCTGGGCTGCCC------------ i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2244367 30 - 8137123 ---CCGAGGGGTGC---GCTCCCCTGTGATCCACCA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 306233 1046 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 115742 143 - 21531802 I e manLeu1.NW_012101810v1 148617 175 - 2515279 I e macNem1.NW_012019910v1 4392382 143 - 9440265 I e aotNan1.NW_018514293v1 103971 449 + 376347 I a score=10648.000000 s hg38.chr7_KI270899v1_alt 141447 10 + 190869 GAGAGA-CCCA s panTro5.chr7_NW_015973580v1_random 15722 10 - 83720 GAGAGA-CCCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531591 10 + 162613886 GAGAGA-CCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102896 10 - 432965 GAGAGA-CCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161668 11 + 85365473 GAGAGACCCCC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33625248 10 + 192294377 GAGGAG-CGCA i macFas5.chr3 I 13 I 50 s cerAty1.NW_012002954v1 16980611 9 - 21915920 TAGGGA-CTC- i cerAty1.NW_012002954v1 C 0 C 0 s calJac3.chrUn_GL286444 34640 10 + 138751 ATCAGA-CCCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349640 10 - 2409723 ATCAGA-CCCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513491 10 - 2125214 ATCAGA-CCCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2244397 10 - 8137123 GGCGGC-CCCA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 306233 1046 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 115742 143 - 21531802 I e manLeu1.NW_012101810v1 148617 175 - 2515279 I e macNem1.NW_012019910v1 4392382 143 - 9440265 I e rheMac8.chr3 34009268 73 + 185818997 I e aotNan1.NW_018514293v1 103971 449 + 376347 I a score=234966.000000 s hg38.chr7_KI270899v1_alt 141457 39 + 190869 GGCGGCCATTgcccgccctgcgtctgc------------gcctgcgccgga s panTro5.chr7_NW_015973580v1_random 15732 39 - 83720 GGCGGCCATTgcccgccctgcgtctgc------------gcctgcgccgga i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531601 39 + 162613886 GGCGGCCATTgcctgccctgcgtctgc------------gcctgcgccgga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102906 39 - 432965 GGCGGCCATTgcccgccctgcgtctgc------------gcctgcgccgga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161679 39 + 85365473 GCCGGCCATTGCCCGgcctgcgtctgc------------gcctgcgccgga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009341 39 + 185818997 GGCGGCCATTGCCCcgcctgcgtctgc------------acctgcgccggc i rheMac8.chr3 I 73 C 0 s macFas5.chr3 33625308 39 + 192294377 GGCGGCCATTGCCCcgcctgcgtctgc------------acctgcgccggc i macFas5.chr3 I 50 C 0 s macNem1.NW_012019910v1 4392525 39 - 9440265 GGCGGCCATTGCCCcgcctgcgtctgc------------acctgcgccggc i macNem1.NW_012019910v1 I 143 C 0 s cerAty1.NW_012002954v1 16980620 39 - 21915920 GGCGGCCATTGCCCcgcctgcgtctgc------------acctgcgccggc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 115885 39 - 21531802 GGCGGCCATTGCCCcgcctgcgtctgc------------acctgcgccagc i chlSab2.chr28 I 143 C 0 s manLeu1.NW_012101810v1 148792 39 - 2515279 GGCGGCCATTGCCCcgcctgcgtctgc------------acctgcgccggc i manLeu1.NW_012101810v1 I 175 C 0 s calJac3.chrUn_GL286444 34650 49 + 138751 AACGGCCATTGTCCTGCCTGCGTCTGC--TTGCGTCTGCACCTGCGCGGAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349650 50 - 2409723 AGCAG-CATTGTTCTGTCTGCGTATGCCTCTGCATCTGCACCGCCGCGGAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513501 39 - 2125214 AGCGGCCATTGCCCTACCTGCGTCTGC------------ACCTCCGGGGAG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2244407 33 - 8137123 ATGGGCTACAGACCGGCCTGCCCCTTC------------G-CTGTG----- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 306233 1046 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I e aotNan1.NW_018514293v1 103971 449 + 376347 I a score=332038.000000 s hg38.chr7_KI270899v1_alt 141496 43 + 190869 gcctcctccacactgcgccag-----cgccgag------tccggccgcctcctc s panTro5.chr7_NW_015973580v1_random 15771 43 - 83720 gcctcctccacactgcgccag-----cgccgag------tccggccgcctccac i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531640 43 + 162613886 gcctcctccacactgcgccag-----cgccgag------tccggccgcctccac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102945 43 - 432965 gccttctccacaccgcgccag-----cgccgag------tccggccgcctccac i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34009380 43 + 185818997 gcctcctccgcaccgcgcttg-----cgccgag------tccggccgcctccac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33625347 43 + 192294377 gcctcctccgcaccgcgcttg-----cgccgag------tccggccgcctccac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4392564 43 - 9440265 gcctcctccgcaccgcgcttg-----cgccgag------tccggccgcctccac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16980659 43 - 21915920 gcctcctccgcaccgcgcttg-----cgcctag------tccggccgcctccac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 115924 43 - 21531802 gcctcctccacaccgcgcttg-----cgccgag------tccggccgcctccac i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 148831 43 - 2515279 gcctcctccgcaccgcgcttg-----caccgag------tccggccgcctccac i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 34699 43 + 138751 GCCTCCTCCACACTGCTTCAG-----AGCCAAG------TCCGGCCTCCTTCAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349700 43 - 2409723 CCCTCCTCCACACCGCGCCTG-----CGCCAAG------TCCGGCCTCCTTTAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513540 43 - 2125214 GCCTTCTCCACACTGCACCTG-----CGCCAAG------TCCGGCCTCCTTCAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 104420 43 + 376347 gcctccttcacactgcgcctg-----cgccaag------ttcggccacttccac i aotNan1.NW_018514293v1 I 449 C 0 s otoGar3.GL873611 2244440 54 - 8137123 GCCGCCGCCACACCGCGCCTGCGCAACGCCGAGCTCATTTCTGGCCTCCCCCCC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 306233 1046 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I e nomLeu3.chr20 161718 0 + 85365473 C a score=694791.000000 s hg38.chr7_KI270899v1_alt 141539 114 + 190869 att------gcgc--------------------------------------------------------------------------------------------cggcgccggggcttcctccacaccgcgcctgcgccGATGACAACCCGCCTCTACAGGACGCCTGCGCAACGCCATAGTCACCTCATCAGCTCCGTGCACTTACGAGT s panTro5.chr7_NW_015973580v1_random 15814 114 - 83720 att------gcgc--------------------------------------------------------------------------------------------cggcgccagggcttcctccacaccgcgcctgcgccGATGACAACCCGCCTCTACAGGACGCCTGCGCAACGCCCTAGTCACCTCATCAGATCCGTGCACTTAAGAGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531683 114 + 162613886 att------gcgc--------------------------------------------------------------------------------------------cggcgccggggcttcctccacaccgcgcctgcgccGATGACAACCCGCCTCTACAGGACGCCTGCGCAACGCCCTAGTCACCTCATCAGATCCGTGCACTTAAGAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 102988 114 - 432965 att------gcgc--------------------------------------------------------------------------------------------gggcgccggggcttcctccacaccgcgcctgcgccGATGACAACCCGCCTCTACAGGACGCCTGCGCAACGCCCTAGTCACCTCATCAGCTCCGTGCACTTACGAGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161718 97 + 85365473 -------------------------------------------------------------------------------------------------------------------gcgtcctccccaccgcgcctgcgccGATGACAACCCGCCTCTACAGGACGCCTGCGCAACGCCCTAGTCACCCCATCTGCTCCGTGCACTTACGAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34009423 113 + 185818997 att------gcgc--------------------------------------------------------------------------------------------cggcg-gggggcttcctccacaccgcgcctgcgccGATGACAACCCGCCTCTGCAGCACGCCTGCGCAACGCCCCAGTCACCTCATCTGCTCCGTGCACATGGGAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33625390 113 + 192294377 att------gcgc--------------------------------------------------------------------------------------------cggcg-gggggcttcctccacaccgcgcctgcgccGATGACAACCCGCCTCTGCAGCACGCCTGCGCAACGCCCCAGTCACCTCATCTGCTCCGTGCACATGGGAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4392607 113 - 9440265 att------gcgc--------------------------------------------------------------------------------------------cggcg-GGGGGCTTCCTCCACACCGCGCCTGCGCCGATGACAACCCGCCTCTGCAGCACGCCTGCGCAACGCCCCAGTCACCTCATCTGCTCGGTGCACATGGGAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16980702 112 - 21915920 att------gcgc--------------------------------------------------------------------------------------------cggc--gGGGGCTTCCTCCACACCGCGCCTGCGCCGATGACAACCCGCCTCTGCAGCACGCCTGCGCAACGCCCCAGTCACCTCATCTGCTCCGTGCACGTGGGAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 115967 114 - 21531802 att------gcgc--------------------------------------------------------------------------------------------cggcgccggggcttccttcacacggcgcctgcgccGATGACAACCCGCCTCTGCAGCACGCCTGCGCAACGCCCCAGTCACCTCGTCTGCTCCGTGCACATGCGAGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 148874 113 - 2515279 att------gcgc--------------------------------------------------------------------------------------------cggcg-gggggcttcctccacaccgcgcctgcgccGATGACAACCCGCCTCTGCAGCACGCCTGCGCAACGCCCCAGTCACCTCATCTGCTCCGTGCACATGGGAGT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 34742 145 + 138751 ACCGCGCCTGCGC-----------------CAAGTCTG----------------------------------------------GCCGCCTCCACATTGTG---CCTGCGCCGGGGCTTCCCCCGCAGAACGCCTGTGCCGAATACAACCCGCCTCCCCACAACGCCTGCGCAGTAGCCTCCTCACCTCATCTGCTCTGCGCACAGGCGAG- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349743 186 - 2409723 ATC------GCGCCTGGACCGCACCTGCGCCAAGTCCGGCCTCCTTTACACCGCGCCCGCGCCAAGTC---------------CGCCGCCTTCACATCGTG----CTGCGCCGGGGCTTCCTCCTCACAACGCCTGTGCCGAATACAACCCGCCTCCACACAACGCCTGCGCGGCAGCCTCCTCACCTCATCTGCTCTCTGCACAGCCGAG- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513583 162 - 2125214 ACC------GCGC----------------------CTG---------------------CGCCAAGTCGGGGGCGGGGGGGGGCGTGTCCTCCACATTGTGGAGGCTGCGCCGTGGCTTCCTCCGCACAAGGCCTGTGCCGAATACAGCCCGCCTCCACACAACGCCTGCGCAGCAGCCCCCTCACCTCATCTGCTCTGTGCACAGGCGAG- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 104463 113 + 376347 att------gtgc--------------------------------------------------------------------------------------------ctgcgctggggcttcctccgcacaaggcctgtgccgaatacaagccgcctCCACACAACGCCTGCGCAGCAGCCTCCTCACCTCATCTGCTCTGTGCACAGGCGGG- i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 306233 1046 + 6586416 I e otoGar3.GL873611 2244494 0 - 8137123 C e canFam3.chr6 61032102 6136 - 77573801 I a score=2405917.000000 s hg38.chr7_KI270899v1_alt 141653 336 + 190869 CTCTCTCTGATCGACCACGTGTTCCTGTCGGCTCACA---GAGGCCGCCTCAGGGTCCTCCCCCATTGTCTT------------------------------------CCTCG-----CACCCTCC-----------------ACT--G-------------------------------------------------------TTCCCGGCCCTTCACTCTGCGCTTGCGCAGGAGTCGCTCG-------CTCCT-----------------------------------CTCTGCGCCTGCGCAGAGGCCACCTCCT-CCCCGCCCGTCCGCTCCCTTGGCGTCGTCTTGG--GCCGCGCCCCGACCCCTTCTGTT------------------TACGCATGCGCAGGAGCC------GCCCTGCGCGGGTGG-GGGGCTGAGCCCCTGTGGCTTCAGGT--TTAAAGGCGCGAGCGCCACCCACGCAGGCA-CAAGGGCTCCTAGTCGTTTTATTTTTAGCGTA s panTro5.chr7_NW_015973580v1_random 15928 340 - 83720 CTCTCTCTGATCGACCACGTGTTCCTGTCGGCTCACA---GAGGCCGCCTCAGGGTCCTTCCCCATTGTCTT------------------------------------CCT-------CACCCTCC-----------------ACT--G-------------------------------------------------------TTCCCGGCCCTTCACTCTGCGCTTGCGCAGGAGTCGCTCGCT--CCTCTCCT-----------------------------------CTCTGCGACTGCGCAGAGGCCACCTCCTCCCCCGCCCGTCCGTTCCCTTGGCGTCTTCTTGG--GCCGCGCCCCGACCGCGTCTGTT------------------TACGCATGCGCAGGAGCC------GCCCTGCGCGGGTGC-GGGGCTGAGCCTCTGTGGCTTCAGGT--TTAAAGGCGCGAGCGCCACCCACGCAGGCA-CAAGGGCTCGTAGTCGTTTTATTTTTAGCGTA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 531797 340 + 162613886 CTCTCTCTGATCGACCACGTGTTCCTGTCGGCTCACA---GAGGCCGCCTCAGGGTCCTTCCCCATTGTCTT------------------------------------CCT-------CACCCTCC-----------------ACT--G-------------------------------------------------------TTCCCGGCCCTTCACTCTGCGCTTGCGCAGGAGTCGCTCGCT--CCTCTCCT-----------------------------------CTCTGCGACTGCGCAGAGGCCACCTCCTCCCCCGCCCGTCCGTTCCCTTGGCGTCCTCTTGG--GCCGCGCCCCGACCGCGTCTGTT------------------TACGCATGCGCAGGAGCC------GCCCTGCGCGGGTGC-GGGGCTGAGCCTCTGTGGCTTCAGGT--TTAAAGGCGCGAGCGCCACCCACGCAGGCA-CAAGGGCTCGTAGTCGTTTTATTTTTAGCGTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 103102 342 - 432965 CTCTCTCTGATCGACCACGTGTTCCTGTCGGCTCACA---GAGGCCGCCTCAGGGTCCTCCCCCATTGTCTT------------------------------------CCTCA-----CACCCTCC-----------------ACT--G-------------------------------------------------------TTCCCGGCCCTTCACTCTGCGCTTGCGCAGGAGTCGCTCGCT--CCTCTCCT-----------------------------------CTCTGCGCCTGCGCAGAGGCCACCTCCTCCCCCGCCCGTCCGCTCCCTTGGCGTCGTCTTGG--GCCGCGCCCCGACCCCGTCTGTT------------------TACGCATGCGCAGGAGCC------GCCCTGCGGGGGTGC-GGGGCTGAGCCATTGTGGCTTCAGGT--TTAAAGGCGCGAGCGCCGCCCACGCAGGCA-CAAGGTCTCCTGGTCGTTTTATTTTTAGCGTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 161815 337 + 85365473 CTCTCTCTGATCGACTACGTGTTCCTGTCGG--CGCA---GAGGCCGCCTCGGGGTCCT-CCCCATTGTCTT------------------------------------CCTCA-----CACCCTCC-----------------GCT--G-------------------------------------------------------TTCCCGGCCCTTCGCTCTGCGCTTGCGCAGGACTCGCTCGCT--CCTCCCCT-----------------------------------CGCTGCGCCTGCGCAGAGGCCACCTCCTCCCCCGCCCGTTTGCTCCCTCGGCGTCGTCTTGG--GCCGCG-CCCGACCCACTCTGTC------------------TGCGCATGCGCAGGAGCT------G-CCTGCGCGGGTGC-GGGGCTCAGCGCTGGTGGCTTCA-GT--TTAAAGGCGCGAGCGCCACCCACGCAGGCACCAAGGGCTCCTAGTCGTTTTATTTTTAGCGTA i nomLeu3.chr20 C 0 M 2061 s rheMac8.chr3 34009536 355 + 185818997 CTCTCTCTGGTCGACCACGTGTTCCTGTCGGCTCCCA---GAGGCCGCCTCGAGGTCCTCCCCCAACGGCTT------------------------------------CCTCA-----CACGCTCC-----------------GCT--G-------------------------------------------------------TTCCCGGCGCTTCACTCCGCGCGTGCGCAGGAGTCGCTCG-------CTCCT-----------------------------------CTCTGCGCCTGCGCAGAGGCCCCCTCGTCCCCCGCCCGTCCGCTGCCTTGACGCCGTCTTGG--GCCTGGCGTCTACCCCTTCTGTTTACGCATGCGCAGGACCCTACGCATGCGCAGGACCC------GCCCTGCGCGGGTGC-GGGGCTGAGCACCCGTGGCCTTAGGT--TTAAAGGCGCGCGAACCACCCACGCAGGGA-CAAGGGCTCTTAGTCGTTTTATGTTTAGCGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33625503 355 + 192294377 CTCTCTCTGGTCGACCACGTGTTCCTGTCGGCTCCCA---GAGGCCGCCTCGAGGTCCTCCCCCAACGGCTT------------------------------------CCTCA-----CACGCTCC-----------------GCT--G-------------------------------------------------------TTCCCGGCGCTTCACTCCGCGCGTGCGCAGGAGTCGCTCG-------CTCCT-----------------------------------CTCTGCGCCTGCGCAGAGGCCCCCTCGTCCCCCGCCCGTCCGCTGCCTTGACGCCGTCTTGG--GCCTGGCGTCTACCCCTTCTGTTTACGCATGCGCAGGACCCTACGCATGCGCAGGACCC------GCCCTGCGCGGGTGC-GGGGCTGAGCACCCGTGGCCTTAGGT--TTAAAGGCGCGCGAACCACCCACGCAGGGA-CAAGGGCTCTTAGTCGTTTTATGTTTAGCGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4392720 355 - 9440265 CTCTCTCTGGTCGACCACGTGTTCCTGTCGGCTCCCA---GAGGCCGCCTCGGGGTCCTCCCCCAACGGCTT------------------------------------CCTCA-----CACGCTCC-----------------GCT--G-------------------------------------------------------TTCCCGGCGCTTCACTCCGCGCGTGCGCAGGAGTCGCTCG-------CTCCT-----------------------------------CTCTGCGCCTGCGCAGAGGCCCCCTCGTCCCCCGCCCGTCCGCTCCCTTGACGCCGTCTTGG--GCCTGGCGTCTACCCCTTCTGTTTACGCATGCGCAGGACCCTACGCATGCGCAGGACCC------GCCCTGCGCGGGTGC-GGGGCTGTGCACCCGTGGCCTTAGGT--TTAAAGGCGCGCGCACCACCCACGCAGGGA-CAAGGGCTGTTAGTCGTTTTATGTTTAGCGTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16980814 354 - 21915920 CTCTCTCTGGTCGACCACGTGTTCCTGTCGGCTCCCA---GTGGCCGCCTCGGGGTCCTCCCCCAACGGCTT------------------------------------CCTCA-----CACGCTCC-----------------GCT--G-------------------------------------------------------TTCCCGGCGCTTCACTCCGCGCGTGCGCAGGAGTCGCTCG-------CTCCT-----------------------------------CTCTGCGCCTGCGCAGA-GCCCCCTCCACCCCCGCCCGTCCGGTCCCTTGACGCCGTCTTGG--GCCTGGCGTCGACACGTTCTGTTTACGCATGCGCAGGACCCTACGCATGCGCAGGAGCC------GCCCTGCGCGGGTGC-GGGGCTGAGCGCCCGTGGCCTCAGGT--TTAAAGTCGCGCGCGCCACCCACGCAGGGA-CAAGGGCTCTTAGTCGTTTTATGTTTAGCGTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 116081 354 - 21531802 CTCTCTCTGGTCAACCATGTGTTCCTGTCGGCTCCCA---GAGGCCGCCTCGGGGTCCTCCCCCAACGGCTT------------------------------------CCTCA-----CGCCCCAC-----------------GCT--G-------------------------------------------------------TTCCCGGCCCTTCACTCCGCGCATGCGCAGGAGTCGCTCG-------CTCCT-----------------------------------CTCTGCGCCTGCGCAGAGGCCCCCTCCTCCCCCGCCCGTCCGCTCCCTTGGCGCCGTCTTGG--GCCTGGCGCCGAGCCCTTCTG-TTACGCATGCGCAGGACCCTACGCATGCGCAGGAGCC------GCCCTGCGCGGGTGC-GGGGCTGAGCGCCGGTGGCCTCAGGT--TTAAAGGCGCGCGCGCCACCCACGCAGGCG-CAAGGGCTCCTAGTCGTTTTATGTTTAGCGTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 148987 355 - 2515279 CTCTCTCTGGTCGACCACGTGTTCCTGTCGGCTCCCA---GAGGCCGCCTCGGGGTCCTCCCCCAACGGCTT------------------------------------CCTCA-----CACGCTCC-----------------GCT--G-------------------------------------------------------TTCCCGGCGCTTCACTCCGCGCGTGCGCAGGAGTCGCTCG-------CTCCT-----------------------------------CTCTGCGCCTGCGCAGAGGCCCCCTCCTCCCCCGCCCGTCCGCTCCCTTGACGCCGTCTTGG--GCCTGGCGTCGACCGCGTCTGTTTACGCATGCGCAGGACCCTACGCATGCGCAGGACCC------GCCCTGCGCGGGTGC-GGGGCTGAGCGCCCGTGGCCTCAGGT--TTAAAGGCGCGCGCACCACCCGCGCAGGGA-CAAGGGCTCTTAGTCGTTTTGTGTTTAGCGTA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 34887 341 + 138751 -TCTAGCTGATCGACTGCGTGTTCCTGCCGGCTCACG---GA-GCCGCCTCGCGGTCCCCCACCATTATCTT------------------------------------CCTCA-----CCCCTTCA-----------------GCT--G-------------------------------------------------------TTTCCGGCTCTTCACTCTGCGCTTGCGCAGGAGTCGCTCTCTCGCCCCTCCT-----------------------------------CTCTGCGCCTGCACGGAGGCCACTTCCTCCCTAGCCCCTGCGCTCCCTTTGAGTCGTTTTGG--G-CGCGCGCCGACCCTCTCCGCT------------------TACTCCTGCGGAGCAGCC------GCTCTGCGCGGGTGC-GGGTGTGAGTACCTGTGACTTCAGGT--TTAAAGGCGTGGGCGCCACCCACGCAGGCA-CAAGTGCTGCTGGTCGTTTTATTTATAGCGTT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 349929 333 - 2409723 -TCTGGCTGATCGACTGCGTGTTCCTGTCGGCTCACA--------------GCGGTCCTCCCCCAGTATCTT------------------------------------CCTCA-----CCCCTTCA-----------------GCTCCC-------------------------------------------------------TTTCCGGCTCTTCACTCTGCGCTTGCGCAGGAGTCGCTCTCTCGCCCCTCCT-----------------------------------CTCTGCGCGTGCTCGGAGGCCACCTCCTCCCTAGCCCGTGCGTCCCCTGTGCGTCGTCCTGG--G-CGCGCGGCGACCCCCTCCGCT------------------TACGCATGCGCAGCAGCC------GTCTGGCGCGGGTGT-TGGGGTGAGTCCCTGTGACTTCAGGT--TTAAAGGCGTGGGCGCCACCCACGCAGGCA-TAAGTGCTGCTAGTCGTTTTATTTATAGCGTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 513745 343 - 2125214 -TCTGGCTGATCGACTCCGTGTTCCTGTAGGCTCACA---GAGGCCGCCTCGCGGTCCTCCCCCATTATCTT------------------------------------CCTCA-----CCCCTTCA-----------------GCT--G-------------------------------------------------------TTTCCGGCTCTTCACTCTGCGCTTGCGCAGGAGTCGCTCTCTCGCCCCTCCT-----------------------------------CTCTGCGCCTGCACGGAGGCCACCTCCTCCCTAGGCCGTGCGTTCCCTTTGCGTCGTCTTGGGCG-CGCGCGCCGACCCTTTCCGTT------------------TACGCATGCGCAGCAGTC------GCCCTGCGCGGGTGC--GGGGTGAGTCCCTGTGACTTGAAGT--GTAAAGGCGTGGGCGCCACCCACGCAGGCA-TAAGTGCTGCTAGTCGTTTTATTTATAGCGTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 104576 344 + 376347 -TCTGGCTGATCCACTGCGTGTTCCTGTCGGCTCACG---GAGGCCGCCTCGCGCTCCTCCCCCATTATGTT------------------------------------CCTCA----CCCCCTTCA-----------------GCTCTG-------------------------------------------------------TTTCCGGCTCTTCACTCTGCGCTTGCGCAGGAGTCCCTCTCTCGCCCCTCCT-----------------------------------CTCTGCGCCTGCGCGGAGGCCACCGCCTCCCCAGCCCGTGCGCTCCCTGTGCGTCGTCTGGG--G-CGCGCGCCGACCCGCTCCGCT------------------TACGCATGCGCAGCAGCC------GCCCTGCGCCGGTGCCGGGGGCGGGTTCCTGTGAC--CGGGT--TTAAAGGCGTGGGCGCCCCCCACGCAGGCG-CAAGTGCTGCTCGTCGTTTTATTTATAGCGTT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2244494 468 - 8137123 TTCCTCCCGAGTGATCGCATCCCCTGGTCAGCTCGCATTGAGGACTGCCAGGGGCGCCTTCTCCAGCGGCCTTAGTCTCCCAGAGGTTTACACTAGAAAAGGTCCAGACCTCAGGTCGCCCCCTCCCCAGAGTCTGCACTTCAGCT--GCAAAAGCCGCCCTCTCATTAGCCGGATGACCACTCAGAGTCCATGCGGACCCGCTCTTCGGGCCCTCCTCTCTGCGCGTGCGCAGAACTCCCCTCTT--CCACCCCTCGGCTGTTCCGGTATTCGGGCTTCTCGGCCCTGGACTCTGCGCGTGCGCAAAATCCGCCTTTCAGCCCACCTGAGCTCTCCC-----------------G------------CCCTGCTCTC------------------TGCGCGCGCTCTGAGGGCAGCGTGGGTTTGCGCGGGTG--GGTGCTTACTGGTGGTGGGCTGAAGTGCTTAAAAGCACAGGTACCACCCTCGCCGACA-CAAAA-----TACTTGTTTTGTTTTTAGTGTA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 306233 1046 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I a score=955820.000000 s hg38.chr7_KI270899v1_alt 141989 201 + 190869 AGGTTTTCCTCTTTAACAAGG--AAGTAAAAAAAA--AAGTTGTGCAATAAATATTAATCGTCCTTATATGTACTCGGGAACGTTCGTCCTTTAGGTTTTCT-----CCTGGCGC--ATGGGCGCCGCCAATCATTTCGGGGCTTATTTTGGTTCTAAAGCCCGGGGC--AGCCAGGCCTCCCTGCCTGGCCTCGGCGGGGACGCGGGACCTGG s panTro5.chr7_NW_015973580v1_random 16268 202 - 83720 AGGTTTTCCTCTTTAACAAGG--AAGTAAAACAAAT-AAGCTGTGCAATAAATATTAATCGTCCTTATATGTACTCGGGAACGTTCGTCCTTTAGGTTTTCT-----CCTGGCGC--GTGGGCGCCGCCGATCATTTCGGGGCTTATTTTGGTTCTAAAGCCCGGGGC--AGCCAGGTCTCCCTGCCTGGCCTCGGCGGGGACGCGGGACCTGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 532137 202 + 162613886 AGGTTTTCCTCTTTAACAAGG--AAGTAAAACAAAT-AAGCTGTGCAATAAATATTAATCGTCCTTATATGTACTCGGGAACGTTCGTCCTTTAGGTTTTCT-----CCTGGCGC--GTGGGCGCCGCCGATCATTTCGGGGCTTATTTTGGTTCTAAAGCCCGGGGC--AGCCGGGCCTCCCTGCCTGGCCTCGGCGGGGACGCGGGACCTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 103444 202 - 432965 AGGTTTTCCTCTTTAACAAGG--AAGTAAAAAAAAT-AAGTTGTGCAACAAATATTAATCGTCCTTATATGTACTCAGGAACGTTCGTCCTTTAGGTTTTCT-----CCTGGCGC--GTGGGCGCCGCCGATCATTTCGGGGCTTATTTTGGTTCTAAAGCCCTGGGC--AGCCAGGCCTCCCTGCCTGGCCTCGGCGGGGACGCGGGACCTGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34009891 168 + 185818997 AGGTTTTCCTCTTTAGCAAGT--AAAAAAAAAGAGC-AAGTTGTGCAATAAATAGTAACCGTCCTTATATGTACTCGGGAAGGTTCGTCCTTTAGGTTTTCT-----CCCGGCGC--GTGGGCACCGCCGGTCATCTCGGGG------------------------------------CTCCCTGCCTGGCCTCGGCGGGGACGCGGGACCTGG i rheMac8.chr3 C 0 I 6 s macFas5.chr3 33625858 168 + 192294377 AGGTTTTCCTCTTTAGCAAGT--AAAAAAAAAGAGC-AAGTTGTGCAATAAATAGTAACCGTCCTTATATGTACTCGGGAAGGTTCGTCCTTTAGGTTTTCT-----CCCGGCGC--GTGGGCACCGCCGGTCATCTCGGGG------------------------------------CTCCCTGCCTGGCCTCGGCGGGGACGCGGGACCTGG i macFas5.chr3 C 0 I 6 s macNem1.NW_012019910v1 4393075 170 - 9440265 AGGTTTTCCTCTTTAGCAAGTAAAAAAAAAAAGAGC-AAGTTGTGCAATAAATAGTAACCGTCCTTATATGTAATCGGGAAGGTTCGTCCTTTAGGTTTTCT-----CTCGGCGC--GTGGGCACCGCCGGTCATCTCGGGG------------------------------------CTCCCTGCCTGGCCTCGGCGGGGACGCGGGACCTGG i macNem1.NW_012019910v1 C 0 I 6 s cerAty1.NW_012002954v1 16981168 168 - 21915920 AGGTTTTCCTCTTTAGCAAGT--AAAAAAAAAGAGC-AAGTTGTGAAATAAATAGTAACCGTTCTTATATGTACTGGGGAAGGTTCGTCCTTTAGGTTTTCT-----CCCGGCAC--GTGGGCACCGCTGGTCATCTCGGGG------------------------------------CTCCCTGTCTGGCCTCGGCGGGGACGCGGGACCTGG i cerAty1.NW_012002954v1 C 0 I 6 s chlSab2.chr28 116435 167 - 21531802 AGGTTTTCCTCTTTAGCAAGT---AAAAAAAAAAGC-AAGTTGTGAAATAAATAGTAACCGTTCTTCTATGTACTCGGGAAGGTTCGTCCTTTAGGTTTTCT-----CCCGGCGC--GTGGGCGCCGCGGGTCATCTCGGGG------------------------------------CTCCCTGCCTGGCCTCGGCGGGGACGCGGGACCTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 149342 167 - 2515279 AGGTTTTCCTCTTTAGAAAGT---AAAAAAAAGAGC-AAGTTGTGAAATAAATAGTAACCGTCCTTATATGTACTCGGGAAGGTTCGTCCTTTAGGTTTTCT-----CCCGGCGC--GTGGGCACCGCCGGTCATCTCGGGG------------------------------------CTCCCTGCCTGGCCTCGGCGgggacgcgggacctgg i manLeu1.NW_012101810v1 C 0 I 7 s calJac3.chrUn_GL286444 35228 172 + 138751 AGGTTTTCCTCTTTAACAAAG--AAGTTAAAAAAAATAAGTTGTGAAATAAATATTAACCGTCCGTATACGTACTC-GGAACGTTCGTCCTTTAGGTTTTCT-----CCTGAC------------------TGATTTTGGTT------------CTAGA-CCCAGGGC--ACCCACGACCCCCTGCCTGGCCTTGGCGGGGACGCGGGACTGG- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 350262 170 - 2409723 AGAGTTTCCTCTTTAACAAGG--ACGTTAAAAAA---AAGTGGCGAAATAAATATTAACAGTCCTTATACGTACTC-GGAACGTTCGTCCTTTAGGTTTTCT-----CCTGGC------------------TGATTTTGGTT------------CTAGAGCCCGGGGC--ACCCGCGCCCCGCTGCCTGGCCTCGGCGGGGACGCGGGACTGG- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 514088 173 - 2125214 AGATTTTCCTCTTTAACAAGG--AAGTTAAAAAAACAAAGTTGTGAAATAAATATTAACAGTCCTTATATGTACTC-GGAACGTTCGTCCTTTAGGTTTTCT-----CCGGGC------------------TGGTTTTGGTT------------CTAGAGCCCTGGGC--ACCCACGCCCCCCTGCCTGGCCTCGGCGGGGACGCGGGACTGG- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 104920 166 + 376347 AGGTTTTCCTCTTT----AGA--ACGTTAAAAAA---AAGTTGTGAAATAAATAGTAACCGTCCTCATACATACTC-GGAACGTCCGTCCTTCAGGTTTTGT-----CCGCGC------------------TGATGTTGGTC------------CTAGAGCCCGGGGC--GCCCGCGCCCCCCTGCCCGGCCTCGGCGGGGACGCGGGACTGG- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2244962 186 - 8137123 AAGTTTTCCTTTTTAGCAAAG--GAGTTATAAAA---AGATT------TAAGTAAAAATCGTTCCTGTTCATGCCTGGGCACATTCATCCTTTCAATTTCCTAGAGCCCTGGTCCCACTGGCCACTTCCTGCCCTTTCGGCC-----------CCCCAATCCCCTGACAAACCGACGTCTCCCTGT-TGGAGCGGGTGGGGAGATGTGG----- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 306233 1046 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I e nomLeu3.chr20 162152 2061 + 85365473 M a score=29035.000000 s hg38.chr7_KI270899v1_alt 142190 5 + 190869 GGCCC s panTro5.chr7_NW_015973580v1_random 16470 5 - 83720 GGCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 532339 5 + 162613886 GGCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 103646 5 - 432965 GGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 164215 5 + 85365473 GGCCC i nomLeu3.chr20 M 2061 C 0 s rheMac8.chr3 34010065 3 + 185818997 --CCC i rheMac8.chr3 I 6 C 0 s macFas5.chr3 33626032 3 + 192294377 --CCC i macFas5.chr3 I 6 C 0 s macNem1.NW_012019910v1 4393251 5 - 9440265 CACCC i macNem1.NW_012019910v1 I 6 C 0 s cerAty1.NW_012002954v1 16981342 3 - 21915920 --CCC i cerAty1.NW_012002954v1 I 6 C 0 s chlSab2.chr28 116602 5 - 21531802 GGCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 149516 5 - 2515279 gcccc i manLeu1.NW_012101810v1 I 7 C 0 s calJac3.chrUn_GL286444 35400 5 + 138751 AGGCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 350432 5 - 2409723 AGGCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 514261 5 - 2125214 AGGCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 105086 5 + 376347 AGCCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2245148 5 - 8137123 AGCCC i otoGar3.GL873611 C 0 I 258 e colAng1.NW_012117710v1 306233 1046 + 6586416 I e canFam3.chr6 61032102 6136 - 77573801 I a score=889279.000000 s hg38.chr7_KI270899v1_alt 142195 199 + 190869 CGGACCGGGCCTAACCGCCCTGGCCGGTCCCC-ACTGATGGTGGCGG-------TCGGTCCTGATC-GTCCTG------ATGGCAGCGACCAGGCTGGACTCGGGCTGTG-------CAGGGGCGAGGGGAGCAGGGCGGGGTGACGCCCGGAGAGCGGCCTGGAGAGCGCGTGCTTCAGAAGGCGTGGGCA-CCCTGTCCCCTTTGCAGA-TGGGGATGCAG s panTro5.chr7_NW_015973580v1_random 16475 200 - 83720 CGGACCGGGCCTAACCGCCCTGGCCGGCCCCCAACTGATGGTGGCGG-------TCGGTCCTGACT-GTCCTG------ATGGCAGCGACCAGGCTGGACTCGGGCTGTG-------CAGGGGCGAGCGGAGCAGGGCGGGGTGACGCCCGGAGAGCGGCCTGGAGAGCGCGTGCTTCAGAAGGCGTGGGCA-CCCTGTCCCTTTTGCAGA-TGGGGATGCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 532344 200 + 162613886 CGGACCGGGCCTAACCGCCCTGGCCGGTCCCCCACTGATGGTGGCGG-------TCGGTCCTGACT-GTCCTG------ATGGCAGCGACCAGGCTGGACTCGGGCTGTG-------CAGGGGCGAGCGGAGCAGGGCGGGGTGACGCCCGGAGAGCGGCCTGGAGAGCGCGTGCTTCAGAAGGCGTGGGCA-CCCTGTCCCTTTTGCAGA-TGGGGATGCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 103651 199 - 432965 CGGACCGGGCCTAACCGCCCTGGCCGGTCCCC-ACTGATGGTGGCGG-------TCGGTCCTGACC-GTCCTG------ATGGCAGCGACCAGGCTGGACTCGGGCTGTG-------CAGGGGCGAGGGGAGCAGGGCGGGGTGACGCCCGGAGAGCGGCCTGGAGAGCGCGTGCTTCAGAAGGCGTGGGCA-CCCTATGCCCTTTGCAGA-TGGGGATGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 164220 183 + 85365473 CGGACCGGG-CTCATCGCCC-GGCCGGTCCCC-ACTGGTGGTGGCGG-------TCGGTCCTGACC-GT-CTG------ATGGCAGCGACCAGGCTGGACTCGGGCTGTG-------CAGGGGCGAGGGGAGCAGGGCGGGGTGACGCCC------------GGAGAGCGCGTGCTTCAGAAGGCATGGGCA-CCCTGTCCCC-TTGCGGA-TGGGGACGCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34010068 173 + 185818997 TGGACCGGGCCTGACCGCCCTGGCCGGTCCCC-ACTGGCG---------------------------TTCCTG------AGGGCAGCGAGCAGGCTGGACTCGGGCTGTG-------CAGGG--GGAGGGAGCAGGACGAG--GGCTCCCGGAGAGCGGCCTGGAGAGCGC--GCTTCGGAGGGCGCGGGCACCCCTGCCCC--TTGCAGA-TGGGGACGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33626035 173 + 192294377 TGGACCGGGCCTGACCGCCCTGGCCGGTCCCC-ACTGGCG---------------------------TTCCTG------AGGGCAGCGAGCAGGCTGGACTCGGGCTGTG-------CAGGG--GGAGGGAGCAGGACGAG--GGCTCCCGGAGAGCGGCCTGGAGAGCGC--GCTTCGGAGGGCGCGGGCACCCCTGCCCC--TTGCAGA-TGGGGACGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4393256 173 - 9440265 CGGACCGGGCCTGACCGCCCTGGCCGGTCCCC-ACTGGCG---------------------------GTCCTG------AGGGCAGCGAGCAGGCTGGACTCGGGCTGTG-------CAGGG--GGAGGGAGCAGGACGGG--GGCTCCCGGAGAGCGGCCTGGAGAGCGC--GCTTCGGAGGGCGCGGGCACCCCTGCCCC--TTGCAGA-TGGGGACGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16981345 158 - 21915920 CGGACCGGGCCTGACCGCCCTGGCCGGTCCCC-ACTGGCG---------------------------GTCCTG------GAGGCAGCGACCAGGCTGGACTTGGGCTGTG-------CAGGG--GGAGGGAGCAGGACGGG--GGCTCCTGGAGAG-----------GCGC--GCTTCGGA-GGCGCGGGCA--CCTGCCCC---TGCAGA-TGGGACAGCGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 116607 166 - 21531802 CGGACCGGGCCTGACCGCCCTGGCCGGTCCCC-ACTGGCG-----------------GTCCTGACA-GTCCTG------AGGACAGCGAGCAGGCTGGACTCGGGCTGTG-------CAGGG--GGAGGGAGCAGGGCGGG--GGCGCCCGGAGAGCGGCCTGGAGA----------------GCGCGGGCA--CCTGCCCC--CTGCAGA-TGGGGACGCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 149521 172 - 2515279 cggaccgggCCTGACCGCCCTGGCCGGTCCCC-ACTGGCG---------------------------GTCCTG------AGGGCAGCGAGCAGGCTGGACTCGGGCTGTG-------CAGGG--GGAGGGAGCAGGACGGG--GGCTCCCGGAGAGCGGCCTGGAGAGCGC--GCTTCGGAGGGCGCGGGCA-CCCTGCCCC--TTGCAGA-TGGGGACGCAG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 35405 192 + 138751 CGGACCG---------ACACTGACCGGTCCCC-ACTGGTGGTGGCGGGAGGTGACCGGTCCTGACCAGCCCTTATCTTCATGGCAGCGACCAGGCTAGACTC-GGTTGTA-------GGGGGACGATGGGAGCAAGGGAGGGTGACACCCGGAAAGCATCCTGGAGAG----------CGAAGACATGGGGA-CCCTGGCCCC-TTGCGGA-GGGCGTCGCAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 350437 202 - 2409723 CGGACCG---------ACGCTGACCGGTCCCC-ACTGGTGGTGGCGGGCGGCGACCGGTCCTGAGCAGCCCTGACCGTCATGGCAGCGACCAGGCTGGACTT-GGCCGTG-------CGGGGGCGAGGGGAGCAGGGCGGGGTGACACCCAGAGAGCATCCTGGAGAGCGCGTGCTTCCGAAGTTGT-GGGA-CCCTGGCCCC-TTGCGGAGGGGGGTCGCAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 514266 153 - 2125214 CGGACCG---------ACCCTGACCGGTCCCC-ACTGGTAGTGGCGGGCGGTGACCGGTCCTGACCAGCCCTGACCGTCATGGCAGCGACCAGGCTGGACTC-GGCTGTGGGGGGGAGGGGGGAGAGGGGAGCAGGGCGGGGTGACGCCCAGAGATCATCCTGG----------------------------------------------------------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 105091 171 + 376347 CGGACCG---------ACCCTGAC--GGTCCC-ACAGGCGGTGGCGGGCGGTGACCGGTCCCGACCAGCCCTGACCGTCATGGCAGCGAGCAGGCTGGACTC-GGCTGTG--------GGGGGCGAGGGGAGCAGGGCGGGGTGACACCCGGAGAGCGTCCCGGGGAGCGCGAGCTTCCGAGGGCGTGGGGA------------------------------- i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 306233 1046 + 6586416 I e otoGar3.GL873611 2245153 258 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I a score=174765.000000 s hg38.chr7_KI270899v1_alt 142394 19 + 190869 GCCCTGGTGGCG-GTGGAGG s panTro5.chr7_NW_015973580v1_random 16675 19 - 83720 GCCCTGGTGGCG-GTGGAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 532544 19 + 162613886 GCCCTGGTGGCG-GTGGAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 103850 19 - 432965 GCCCTGGTGGCC-GTGGAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 164403 19 + 85365473 GCCCTGGTGGCC-GTGGAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34010241 19 + 185818997 GCCCTGGGGGCC-GTGGAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33626208 19 + 192294377 GCCCTGGGGGCC-GTGGAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4393429 19 - 9440265 GCCCTGGGGGCC-GTGGAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16981503 20 - 21915920 GCCCTGGGGACCGGTGGAGG i cerAty1.NW_012002954v1 C 0 I 23 s chlSab2.chr28 116773 19 - 21531802 GCCCTGGGGGCC-GTGGAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 149693 19 - 2515279 GCCCTGGGGGCC-GTGGAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 307279 19 + 6586416 GCCCTGGGGACC-GTGGAGG i colAng1.NW_012117710v1 I 1046 C 0 s calJac3.chrUn_GL286444 35597 19 + 138751 ACCCTGATGTCC-GTGGATG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 350639 19 - 2409723 GCCCTGGTGGCA-GTGGAGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 514419 18 - 2125214 -CCCTGGTGGCT-GTGGAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 105262 18 + 376347 -CCCTGGTGGCC-GTGGAGG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2245153 258 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I a score=122628.000000 s hg38.chr7_KI270899v1_alt 142413 24 + 190869 -GGAGATGGG------GGCAGGGACGTTGCC s panTro5.chr7_NW_015973580v1_random 16694 24 - 83720 -GGGGATGGG------GGCAGGGACGCTGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 532563 24 + 162613886 -GGGGATGGG------GGCAGGGACGCTGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 103869 24 - 432965 -GGAGATGGG------GGCAGGGACGTTGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 164422 24 + 85365473 -GGAGAAGGG------GGCAGGGACGCTGCG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34010260 22 + 185818997 -GGAGAAGGG------GACAGGGACGCTG-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33626227 22 + 192294377 -GGAGAAGGG------GACAGGGACGCTG-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4393448 22 - 9440265 -GGAGAAGGG------GACAGGGACGCTG-- i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 116792 22 - 21531802 -GCAGAAGGG------GGCACGGACGCTG-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 149712 22 - 2515279 -GGAGAAGGG------GACAGGGACGCTG-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 307298 22 + 6586416 -GGAGGAAGG------GGCAGGGACGCTG-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 35616 31 + 138751 GGAGGAGAGGCGAGGCGGCGGGGTCGTTGCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 350658 25 - 2409723 GGAGGAGAGG------GGCGGGGTCGTTGCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 514437 25 - 2125214 GGAGGAGAGG------GGCGGGGTGGTTGCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 105280 25 + 376347 GGAGGACAGG------GGCGGGGTGGTTGCC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2245153 258 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e cerAty1.NW_012002954v1 16981523 23 - 21915920 I a score=953708.000000 s hg38.chr7_KI270899v1_alt 142437 113 + 190869 ------GGG---------CAGAGGAAGCTGGGTGAGTGTGCACTTGGTCCCCTTTGCTCCTCCCTGGGACTTTGGGCTCTATAGGGCAGCCTCCGAGGCCCACGTGCACACTCGGTGAACCACAGTCC s panTro5.chr7_NW_015973580v1_random 16718 113 - 83720 ------GGG---------CAGAGGAAGCTGGGTGAGTGTGCACTTGGTCCCCTTTGCTCCTCCCTGGGACTTTGGGCTCCATAGGGCAGCCTCCGAGGCCCACGTGCACACTCGGTGAACCAcagtcc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 532587 113 + 162613886 ------GGG---------CAGAGGAAGCTGGGTGAGTGTGCACTTGGTCCCCTTTGCTCCTCCCTGGGACTTTGGGCTCCATAGGGCAGCCTCCGAGGCCCACGTGCACACTCGGTGAACCACAGTCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 103893 113 - 432965 ------GGG---------CAGAGGAAGCTGGGTGAGTGTGCACTTGGTCCCCTTTGCTCCTCCCCGGGACTTTGGGCTCTATAGGGCAGCCTCCGAGGCCCACGTGCACACTCGGTGAACCACAATCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 164446 113 + 85365473 ------GGG---------CAGAGGAAGCTGGGTGAGTGTGCACTTGGTCCCCTTCGCTCCTTGCTGGGACCTTGGGCTCCACAGGGCAGCCTCCGAGGCCTACGTGCACACTCGGTGAACCACAGTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34010282 109 + 185818997 ------GGG---------CAGAGGAAGCTG----AGTGTGAACTTGGCCCCCTTTTCTCCTCCCTGGGCCCTCGGGCTCCACAGGGCAGCCTCCGAGGCCCACGTGCACGCTAGGTGACCCACAGTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33626249 109 + 192294377 ------GGG---------CAGAGGAAGCTG----AGTGTGAACTTGGCCCCCTTTTCTCCTCCCTGGGCCCTCGGGCTCCACAGGGCAGCCTCCGAGGCCCACGTGCACGCTAGGTGACCCACAGTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4393470 109 - 9440265 ------GGG---------CAGAGGAAGCTG----AGTGTGAACTTGGCCCCCTTTTCTCCTCCCTGGGCCCTCGGGCTCCACAGGGCAGCCTCCGAGGCCCACGTGCACGCTAGGTGACCCACAGTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16981546 108 - 21915920 ------GGG---------CAGA-GAAGCTG----AGTGTGAACTTGGCCCCCTTTGCTCGTCCCTGGGCCCTCGGGCTCCACAGGGCAGCCTCCGAGGCCCACGTGCACGCTAGGTGACCCACAGTCC i cerAty1.NW_012002954v1 I 23 C 0 s chlSab2.chr28 116814 103 - 21531802 ------GGG---------CAGAGGAAGCTGAGTCAGTGTGAACCTGGCCCCCTTTGCTTCTCCCTGGGCCCTCGGGCTCCACAGGGCAG----------CCACGTGCACACTCGGTGACCCGCAGGCC i chlSab2.chr28 C 0 I 26 s manLeu1.NW_012101810v1 149734 109 - 2515279 ------GGG---------CAGAGGAAGCTG----AGTGTGAACTTGGCCCCCTTTGCTCCTTCCTGGGCCCTGGGGCGCCACAGGGCAGCCTCCGAGGCCCACGTGCAGGCTAGGTGACCCACAGTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 307320 113 + 6586416 ------GGG---------CAGAGGAAGCTGAGTGAGTGTGAACTTGGTCCCCTTTGCTCCTCCCTGGGCCATCGGGCTCCATGCGGCAGCCTCCCAGGCCCATGTGCACACTCCGTGACCCACAGTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 35647 127 + 138751 TTGCAGAGGCCATTGTTCCAGTGGAAGCTGGGTGAATGCGAGCTTGGTCCCCTTTGCTTCTCCCTGGTACCTCGGGCCCCACAGGGC-GCCTCTGAGGCCCACGTACACGCTAGGTGACCCACAGTTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 350683 127 - 2409723 TTGCAGAGGCCATTGTTCCAGAGGAAGCTGGGTGAGTGCGAGCTTGGTCCCCTTTGCTTCTCCCTGGGACCTCGGGCTCCACAGGGC-GCCTCCGAGGCCCACGTGCACACTAGGTGACCCACAGTCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 514462 127 - 2125214 TTGCAGTGGCCATTGTTCCAAAGGAAGCTGGGTGAGTGCGAGCTTGGTCCCCTTTGCTTCTCCCTGGGACCTCGGGCTCCACAGGGC-GCCTCCGAGGCCCACGTGCACACTAGGTGACCCACAGTCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 105305 127 + 376347 TCGCAGAGGCCACTGTTCCAGAGGAAGCTGGCTGCGTGCGAGCTGGGTCCCCTTTGCTTCTCCCTGGGACCGCGGGCTCCACAGGGC-GCCTCCGCGGCCCACGTGCACACGAGGTGACCCGCAGTCC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2245153 258 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I a score=106873.000000 s hg38.chr7_KI270899v1_alt 142550 15 + 190869 AGACACAggca-gggc s panTro5.chr7_NW_015973580v1_random 16831 15 - 83720 agacacaggca-gggc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 532700 15 + 162613886 AGACACAggca-gggc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 104006 16 - 432965 AGACACAGGCAGGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 164559 15 + 85365473 AGACACgggca-gggc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34010391 15 + 185818997 AGACACTGGCA-GGCC i rheMac8.chr3 C 0 I 9 s macFas5.chr3 33626358 15 + 192294377 AGACACTGGCA-GGCC i macFas5.chr3 C 0 I 9 s macNem1.NW_012019910v1 4393579 15 - 9440265 AGACACTGGCA-GGCC i macNem1.NW_012019910v1 C 0 I 9 s cerAty1.NW_012002954v1 16981654 15 - 21915920 AGACACAGGCA-GGCC i cerAty1.NW_012002954v1 C 0 I 2 s manLeu1.NW_012101810v1 149843 13 - 2515279 AGACACAGGCA-GG-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 307433 15 + 6586416 AGGCACAGGCA-GGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 35774 15 + 138751 AGACCCAGGCA-GGGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 350810 15 - 2409723 AGACGCAGGCA-GGGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 514589 15 - 2125214 AGACCCAGGCA-GGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 105432 15 + 376347 AGACCCGGGCA-GGGC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2245153 258 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I e chlSab2.chr28 116917 26 - 21531802 I a score=2007858.000000 s hg38.chr7_KI270899v1_alt 142565 262 + 190869 ggcaggccag------------------------------gga--agga----gaggccaggTGTTGGTGCATGGAGAGGCCAGGTGTTGGCCTGGGGGTGCTAAGTGAACCCCCAAGGTC-GCGGAGACAGTAGGGCAACAGCAAAACGAGCTCTGCCGTCCAGGGCGAGGG-CCCGGAGTCCTCCCCAGGGGTGGGCTGCAGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCTCCCGAGCTCCTGTGCCCCCAGCAGCAATCCCAGCCCCGCTGACACCCAAGCTTGTCA s panTro5.chr7_NW_015973580v1_random 16846 239 - 83720 ggcaggccag------------------------------gga--a---------------------------ggagaggccaggTGTTGGCCTGGGGGTGCTAAGTGAACCCCCAAGGTC-GCGGAGACAGTAGGGCAACAGCAAAACGAGCTCTGCGGTCCAGGGCGAGGG-CCCGGAGTCCTCCCCAGGGGTGGGCTGCAGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCTCCCGAGCTCCTGTGCCCCCAGCAGCAATCCCAGCCCCGCTGACACCCAAGCTTGTCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 532715 262 + 162613886 ggcaggccag------------------------------gga--agga----gaggccaggTGTTGGTGCATGGAGAGGCCAGGTGTTGGCCTGGGGGTGCTAATTGAACCCCCAAGGTC-GCGGAGACAGTAGGGCAACAGCAAAACGAGCTCTGCGGTCCAGGGCGAGGG-CCCGGAGTCCTCCCCAGGGGTGGGCTGCAGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCTCCCGAGCTCCTGTGCCCCCAGCAGCAATCCCAGCCCCGCTGACACCCAAGCTTGTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 104022 262 - 432965 GGCAGGCCAG------------------------------GGA--AGGA----GAGGCCAGGTGTTGGTGCATGGAGAAGCCAGGTGTTGGCCTGAGGGTGCTAAGTGAACCCCCAAAGTC-GCGGAGACAGTAGGGCAACAGCAAAACGAGCTCTGCGGTCCAGGGCGAGGG-CCCAGAGTCCTCCCCAGGGGTGGGCTGTGGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCTCCCGAGCTCCTGTGCCCCCAGCAGCAATCCCAGCCCCGCTGACACCCAAGCTTGTCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 164574 238 + 85365473 ggcaggccag------------------------------gga--a---------------------------ggagaggccaggTGTTGGCCTGGGGGTGCTAAGTGAACCCGCAAGGTC-GCGGAGACAGCAGGGCAACAGCAAAACGAGCTCTGCGGTCCAGGGCGAGGG-CCCGGAGTCCTCCCCAGGGATGGGCTTCAGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCTCCCGAGCTCCTGTGCCCCCAACAGCAAT-CCGGCCCCGGTGACACCCACGCCTGTCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34010415 294 + 185818997 GAGAGGCCAGGTGTTGGCCTGGGGGTGCTAAGTGGAACCCGGACTAGGA----GAGGCCAGGTGTGGGTGCATGGAGAGGCAAGGTGTTGGCCTGGGGGTGCTAAGTGGAACCCCAAGTTC-GCGGAGACCGCAGGGCAACAGCAAAACGAGTTATTCGGTCCAGGGCGGGGG-CCTAGACTCCTCCCCAGGGACGGGCGGCAGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCTCCCGGGCTGCTGTGCTCCCACCAGCAGTCCCGGCCCCGGTGACACCCACGCCTGTCA i rheMac8.chr3 I 9 C 0 s macFas5.chr3 33626382 294 + 192294377 GAGAGGCCAGGTGTTGGCCTGGGGGTGCTAAGTGGAACCCGGACTAGGA----GAGGCCAGGTGTGGGTGCATGGAGAGGCAAGGTGTTGGCCTGGGGGTGCTAAGTGGAACCCCAAGGTC-GCGGAGACCGCAGGGCAACAGCAAAACGAGTTATTCGGTCCAGGGCGGGGG-CCTAGACTCCTCCCCAGGGACGGGCGGCAGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCTCCCGGTCTGCTGTGCTCCCACCAGCAGTCCCGGCCCCGGTGACACCCACGCCTGTCA i macFas5.chr3 I 9 C 0 s macNem1.NW_012019910v1 4393603 294 - 9440265 GAGAGGCCAGGTGTTGGCCTGGGGGTGCTAAGTGGAACCCGGACTAGGA----GAGGCCAGGTGTGGGTGCATGGAGAGGCAAGGTGTTGGCCTGGGGGTGCTAAGTGGAACCCCAAGGTC-GCGGAGACCGCAGGGCAACAGCAAAACGAGTTATTCGGTCCAGGGCGGGGG-CCTAGAGTCCTCCCCAGGGACGGGCGGCAGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCCCCCGGGCTGCTGTGCTCCCACCAGCAGTCCCGGCCCCGGTGACACCCATGCCTGTCA i macNem1.NW_012019910v1 I 9 C 0 s cerAty1.NW_012002954v1 16981671 254 - 21915920 ----------------------------------------GGACTAGGA----GAGGCCAGGTGTGGGTGCATGGAGAGGCAAGGTGTTGGCCTGGGGGTGCTAAGTGGAGCCCCAAGGTC-GCGGAGACCGCAGGGCAACAGCAAAACGAGTTATTCGGTCCAGGGCGGGGG-CCTAGAGTCCTCCCCAGGGATGGGCGGCAGAGAAGCCCCTGTCCAGGCCGTGCTCACCTGC-AAAGTGCTCCCGGGCTGCTGTGCTCCCACCAGCAGTCCCGGCCCCGGTGACACCCACGCCTGTCA i cerAty1.NW_012002954v1 I 2 C 0 s chlSab2.chr28 116943 249 - 21531802 GGCAGGCCGG------------------------------GGACTAGGA----GAGGCCCCGTGTGGGTGCATGGAGAGGCCATGTGTTGGCCTGAGGGTGCTAAGTGAAGCCCCAAGGTC-GCGGAGACAGCAGGGCAACAGCC---------------CCCAGGGCGGGGG-CCCAGAGTCCTCCCCGGGGGAGGGCTGCAGAGAAGCCCCCGTCCAGGCCCTGCTCACCTGT-AAAGTGCTCCCGGGCTGCTGTGCTCCCACCAGCAGTTCTGGCCCTGGTGACACCCACGCCTGTCA i chlSab2.chr28 I 26 I 315 s manLeu1.NW_012101810v1 149856 258 - 2515279 ------CCGG------------------------------GGACTAGGA----GAGGCCAGGTGTGGGTGCATGGAGAGGCAAGGTGTTGGCCTGGGGATGGTAAGTGGAGCCCCAAGGTC-GCGGAGACCGCAGGGCAACAGCAAAACGAGTTATTCGGTCCAGGGCGGGGG-CCTAGAGTCCTCCCCAGGGACGGGCGGCAGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCTCCCGGGCTGCTGTGCTCCCACCAGCAGTCCCGGCCCCGGTGACACCCACGCCTGTCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 307448 261 + 6586416 --------GG------------------------------GGACTAGGAGAGGGAGGCCAGGTGTGGGTGCATGGAGAGGCAAGGTGTTGGCCTGGGGGTGCTAAGTGGAGCCCCAAGGTG-GCGGAGACAGCAGGGCAACAGCAAAACGAGTTATTCAGTCCAGGGCAGGGGCCCCAGAATCCTCCCCAGGGATGGGATGCAGAGAAGCCCCTGTCCAGGCCCTGCTCACCTGC-AAAGTGCTCCCGGGCTGCTGTGCTCCCACCAGCAGTGCTGGCCCCGGTGACACCCATGCCTGTCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 35789 228 + 138751 -ACAAGGCAG------------------------------GGA--AGGA---------------------------GAGGCCAGTTGTTGGCCTGGAGGTACTAAGTGAACCGCCAAGGTCGGTGGAGACAGCA-GGCAACAGCAAAAGGAGCTCTGCAGTCCGAAGCGAGGA-CCCAGAGTCCTCCCCAGGCGTGGACGACAGAGAAGCGCCTGTTCAGGCCCTGCTCACTTGC-AAAGTGCTCCGGAGCTC--------CCACCAGCAATCCTGG--CTGGTGACACCCACGCCTGTCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 350825 236 - 2409723 -ACAAGCCAG------------------------------GGA--AGGA---------------------------GAGGCCAGATGTTGGCCTGGGGGTGCTAAGTGAACCCCCAAGGTC-GCGGAGACAGCA-GGCAACAGCAGAAGGAGCCCTGCAGTCCAAAGCGAGGG-CCCAGAGTCCTCCCCAGGCGTGGATGGCAGAGAGGCCCCTGTTCAGGCCCTGATCACTTACAAAAGTGCTCCGGAGCTCAGGTGCTTCCACCAGCAATCCTGG--CTGGTGACACTCATGCCTGTCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 514604 235 - 2125214 -ACAAGCCAG------------------------------GGA--AGGA---------------------------GAGGCCAGATATTGGCCTGGGGGTGCTAAGTGAACCCCCAAGGTC-GCCGAGACCGCC-GGCAACAGCAAAAGGAGCTCTACAGTCTGAAGCGAGGG-CCCGGAGTCCTCCCCAGGCGTGGATGGCAGAGAAGCCCCTGTTCAGGCCCTGCTCACTTGC-AAAGTGCTCCGGAGCTGCGGTGCTTCCACCAGCAATCCTGG--CTGGTGACATTCACGCCTGTTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 105447 234 + 376347 -ACAAGCCGG------------------------------GGA--AGGA---------------------------GAGGCCGGATGTTGGCCCGGGGGTGCTCAGTGAACCCCCAAGGTC-GCGGAGACAGCA-GGCAACAGCAGAAGGAGCTCTGCGGTCGGAAGCGAGGG-CCCGGAGTCCTCCCCAGGCGTGGACGGCGGAGAAGCCCCTGTTCAGGCCCTGCTCACTTGC-AAAGTGCTCC-GAGCTCCGGTGCTTCCAGCAGCAATCCGAG--CTGGTGACTCTCACGCCGGTCA i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2245153 258 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I a score=2595752.000000 s hg38.chr7_KI270899v1_alt 142827 307 + 190869 CCCGCTGGGTTTCTTGAGGTCTGAGGACCGTGGCTGAGGGTGCATGGGCGCTGGGATGGA-----GGGGGATGTCCTGTCCCAGTCTGTGCTTATTAAttgttaaagagggcaaggctgcttttattcaaggtgggg-------------gggctgctaaagcgagatgttgggttaggggaggcagatccggctcaactccagatagaaaaagtgggaattgacagcccaggcgtagggtc-gggagtggagagaaaattactaagaggaagggtcaggggcaaggcgggttctagctgcata-----gacaggatttttgctgaaaagg s panTro5.chr7_NW_015973580v1_random 17085 299 - 83720 CCCGCTGGGTTTCTTGAGGTCTGAGGACCGTGGCTGAGGGTGCATGGGCGCTGGGATGGAG----GGGGGATGTCCTGTCCCAGTCTGTGc-------ttgttaaagagggcaaggctgcttttattcgag--cggg-------------gggctgctaaagcgagatgttgggttaggggaggcagatccggctcaactccagatagaagaagtaggaattgacagcccaggcgtagggtc-gggagtggagagaaaattactaagaggaagggtcaggggcaaggcgggttctagctgcata-----gacaggatttttgctgaaaagg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 532977 299 + 162613886 CCCGCTGGGTTTCTTGAGGTCTGAGGACCGTGGCTGAGGGTGCATGGGCGCTGGGATGGAG----GGGGGATGTCCTGTCCCAGTCTGTGc-------ttgttaaagagggcaaggctgcttttattcaag--cggg-------------gggctgctaaagcgagatgttgggttaggggaggcagatccggctcaactccagatagaagaagtaggaattgacagcccaggcgtagggtc-gggagtggagagaaaattactaagaggaagggtcaggggcaaggcgggttctagctgcata-----gacaggatttttgctgaaaagg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 104284 299 - 432965 CCCGCTGGGTTTCTTGAGGTCTGAGGACCGTGGCTGAGGGTGCATGGGCGCTGGGATGGAG----GGGGGATGTCCTGTCCCAGTCTGTGc-------ttgttaaagagggcaaggctgcttttattcaac--gggg-------------gcgctgctaaagcgagatgttgggttaggggaggcagatccggctcaactccagatagaaaaagtgggaattgacagcccaggcgtagggtc-gggagtggagagaaaattactaagagcaagggtcaggggcaaggcgggttttagctgcata-----gacaggatttttgctgaaaagg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 164812 284 + 85365473 CCCGCTGGGTTTCTTGAGGTCTGAGGACTGTGGCTGAGGGTGCATGGGCGCTGGGATGGA-----GGGGGATGTCCTGTCCCGGTCTGTGc-------ttgttaaagagggcaaggctgcctttagtcaag----gg-------------gggctgctaaagcgagatgttgggttaggggaggcagatccagctcaactccagatagaaaaagtgggaactgacagtccaggcgtagggtc-gggagtggagagaaaattactaaga------------agcaaggcgggttctggctgcata-----gacaggatttttgctgaaaagg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34010709 295 + 185818997 CCCGCTGGGTTTCTTGAGGTCTGAGGACTGTGGCTGAGGGTGCATGGGCGCTGGGATGAA-----GGGTAATGTCCTGTCCCAGACTGcac-------ttgttcaagagggcaaggccgcctttattcaag----gg-------------gggcttctaaagcgagatgttgggttaggagaggcagatccagctcaactccaaatggaaaaagtgggacttgacatcccaggcgtagggtcgggggatggagagaaaattactaagaggaagggtcagaggcaaggcgggttctggctgcata-----gacaggagttttgccg--aagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33626676 295 + 192294377 CCCGCTGGGTTTCTTGAGGTCTGAGGACTGTGGCTGAGGGTGCATGGGCGCTGGGATGAA-----GGGTAATGTCCTGTCCCAGACTGcac-------ttgttcaagagggcaaggccgcctttattcaag----gg-------------gggcttctaaagcgagatgttgggttaggagaggcagatccagctcaactccaaatggaaaaagtgggacttgacatcccaggcgtagggtcgggggatggagagaaaattactaagaggaagggtcagaggcaaggcgggttctggctgcata-----gacaggagttttgccg--aagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4393897 295 - 9440265 CCCGCTGGGTTTCTTGAGGTCTGAGGACTGTGGCTGAGGGTGCATGGGCGCTGGAATGAA-----GGGGGATGTCCTGTCCCAGACTGcac-------ttgttcaagagggcaaggccgcctttattcaag----gg-------------gggcttctaaagcgagatgttgggttaggagaggcagatccagctcaactccaaatggaaaaagtgggacttgacatcccaggcgtagggtcgggggatggagagaaaattactaagaggaagggtcagaggcaaggcgggttctggctgcata-----gacaggagttttgccg--aagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16981925 294 - 21915920 CCCGCTGGGTTTCTTGAGGTCTGAGCACTGTGGCTGAGGGTGCATGGGCGCTGGGATGAA-----GGGGGATGTCCTCTCCCAGACTGcgc-------ttgttcaagagggcaaggccgcctttattcaag----gg-------------gggctgctaaagcgagatgttgggttaggagaggcagatccagctcaactccaaatggaaaaagtgggacttgacatcccaggcgtagggtc-ggggatggagagaaaattactaagaggaagggtcagaggcaaggcgggttctggctgcata-----gacaggagttttgccg--aagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 117507 292 - 21531802 cCCGCTGGGTTTCTTGAGGTCTGAGGACTGTGGCTGAGGGTGCATGGGCACTGGGATGGA-----GGGGGATGTCCTGTCCCAGACTGTGc-------ttgttaaagagggcaaggccgcctttattcaag----gg-------------gggctgctaaagcgagatgttgggttaggggaggcagatccagctcaactccaaatagaaaaagtgggacttgacagcccaggcgctgggtc-gggg-tggggagaaaattactaagaggaagagtcagaggcaaggc-ggttctggctgcaga-----cacaggagttttgcgg--aagg i chlSab2.chr28 I 315 C 0 s manLeu1.NW_012101810v1 150114 294 - 2515279 CCCGCTGGGTTTCTTGAGGTCTGAGGACTGTGGCTGAGGGTGCATGGGCGCTGGGATGAA-----GGGGGATGTCCTGTCCCAGACTGCCc-------ttgttcaagagggcaaggccacctttattcaag----gg-------------gggctgctaaagcgagatgttgggttaggagaggcagatccagctcaactccaaatggaaaaagtgggacttgacatcccaggcgtagggtc-ggggatggagagaaaattactaagaggaagggtcagcggcaaggcgggttctggctgcata-----gacaggagttttgccg--aagg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 307709 294 + 6586416 CCCGCTGGCTTTCTTGAGGTCTGAGGACTGTGGCTGAGGGTGCATGGGCGCTGGGATGGA-----GGGGAATGTCCTGTCCCAGtctgcgc-------ttgttaaagagggcaaggccgctttttttcaag----gg-------------ggactgctaaagcgagatgttgggttaggggaggcagatccagctcaactccaaataggaaaaatgggacttgacagctcaggcgtagggtc-gggggtggagagaaaattactaagaggaaggatcagaggcaaggcaggttctggctgcata-----gacaggatttttgctg--aagg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 36017 314 + 138751 CCCGCTGGGTTTCTTGAGATCTGAGGACTGGGGCTCAGGTTTCTTTGGCACTGGGGTTGGGGGTCTGGGAATGTCCTGTCCCAGTCTG----------ttgtttaagagggcaaaggggcctttattcaaa----ggccgggcggaaggggggctgctaaagcgaggtgtggggttaggggaggcagatccagcttgactccaaaaagaaaaagtgggaattgacagccaaggagtagggtc-ggggatagatagaacattacgaagatgaagggtcaggggcaaggcagattctgactgcatagacttgacaggatttttgctg--aagg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 351061 307 - 2409723 CCCCCTGGGTTTCTTGAGGTCTGAGGACTGGGGCTGAGGATTCTTGGGCACTGGGGTTGGGGGACGGGGAATGTCCTTTCCCAGTCTGTGc-------ttgttaaagagggaaaaggtgtctttatgcaaa----gg---------gagggggctgctaaagcgaggtgtggggttaggggaggcaggtccagcttgactccaaaaagaaaaa-tgggaatttacagccaaggagtagggtg-ggaggtggatagaacattactaaaataaagggtcagggacaaggcagattctggctgcatagacttgacaggatttttgctg--aagg i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 514839 302 - 2125214 CCCGCTGGGTTTCTTGAGGTCTGAGGACTGGGGCTGAGGATTCTTGGGCACTGGGGTTGGGGGACAGGGAATGTCCTTTCCCAGTCTGTGc-------ttgttaaagagggcaaaggtgtctttattcaaa----gg---------gagggggctgctaaagcaaggtgtggggttaggggaggcaggtccagcttgactccaaaaagaaaaa-tgggaattgacagccaaggagtagggtc-gggggtggat-----attactaagatgaagggtcaggggcaaggcagattctggctgcatagacttgacaggatttttgctg--aggg i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 105681 310 + 376347 CCCGCTGGGTTTCTTGAGGTCTGAGGACTGGGGCTGAGGATTCTTGGGCACTGGGGTTGGGGGGCGGGGAATGTCCTGTCCCGGTCTGTGc-------ttgttaaagagggccaaggtgcctttattcaaa----gg-------tggtgggggctgctaaagcgaggtgtggggttgcgggaggcaggtccagcttgactccgaaaagaaaaagtgggaatcgacagccaaggagtagggtc-gggggtggatagaacattcctaaggtgaagggtcaggggcagggcagatgctggctgcatagacttgacaggatttttgctg--aagg i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2245153 258 - 8137123 I e canFam3.chr6 61032102 6136 - 77573801 I a score=1691403.000000 s hg38.chr7_KI270899v1_alt 143134 173 + 190869 caggcagtgtggtcacagaccgagggtgggagttgaggactttgatcagggaccaagagtagacgattttcactaaaccgactcagcaggattcttgctaa-atcggccgaaaccggccaaggtcagggactggtcacagggagggctcagaggagcctgactcgagtgtggtc s panTro5.chr7_NW_015973580v1_random 17384 173 - 83720 caggcagtgtggtcacagaccgagggtgggagttgaggactttgatcagggaccaagagtagacgattttcactaaaccgactcagcaggattcttgctaa-atcggccgaaaccggccaaggtcagggactggtcacagggagggctcagaggagcctgactcgagtgtggtc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 533276 173 + 162613886 caggcagtgtggtcacagaccgagggtgggagttgaggactttgatcagggaccaagagtagacgattttcactaaaccgactcagcaggattcttgctaa-atcggccgaaaccggccaaggtcagggactggtcacagggagggctcagaggagcctgactcgagtgtggtc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 104583 173 - 432965 caggcagtgtggtcacagaccgagggtgggagttgaggactttgatcagggaccaagggtagacgattttcactaaaccgactcagcaggattcttgctaa-atcggccgaaaccggccaaggtcagggactggtcacagggagggctcagaagagcctgactccagtgtggtc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 165096 173 + 85365473 caggcagtgtggtcacagaccgagggtgggagtcgaggactttgatcagggaccaagggtagaggattttcactaaaccgactcagcaggactcctgctaa-atcggcctaaaccggccaaggtcagggactggtcacagggagggctcagaggagcctgactcgagtgtggtc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34011004 172 + 185818997 caggcagcgtggtcacagaccatgggtgggagttgaggactttgatcagggaccaagggtaggggattttcactaaaccaactcagcaggattcttgctaa-atcggcctaaaccggccaaggtcagggactggtcacagggagggctcagaggagcctgacttgagtgt-gtg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33626971 172 + 192294377 caggcagcgtggtcacagaccaagggtgggagttgaggactttgatcagggaccaagggtaggggattttcactaaaccaactcagcaggattcttgctaa-atcggcctaaaccggccaaggtcagggactggtcacagggaaggctcagaggagcctgacttgagtgt-gtg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4394192 172 - 9440265 caggcagcgtggtcacagaccaagggtgggagttgaggactttgatcagggacaaagggtaggggattttcactaaaccaactcagcaggattcttgctaa-atcggcctaaaccggccaaggtcagggactggtcacagggagggctcagaggagcctgacttgagtgt-gtg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16982219 172 - 21915920 caggcagcgtggtcacagaccaagggtgggagttgaggactttgatcagggaccaagggtaggggattttcactaaaccgactcagcaggattcttgctaa-atcggcctaaaccggccaaggtcagggactggtcacagggagggctcagaggagcctgacttgagtgt-gta i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 117799 172 - 21531802 caggcagcgtggtcacagaccgaaggtgggagttgaggactttgatcagggaccaaggataggggattttcactaaaccgactcagcaggattcttgctaa-atcggcctaaaccggccaaggtcagggactggtcacagggagggctcagagcagcctgactcgagtgt-gtc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 150408 172 - 2515279 caggcagcgtgatcacagaccaagggtgggagttgaggactttgatcagggaccaagggtaggggattttcactaaaccgactcagcaggattcttgctaa-attggcctaaactggccaaggtcagggactggtcacagggagggctcagaggagcctgacttgagtgt-gta i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 308003 172 + 6586416 caggcagcgtggtcacagactgaggttgggagttgaggactttgatcagggaccaagggtaggggattttcactaaactgactcagcaggatttttgctaa-atcggcctaaaccgggcaaggtcagggactggtcacagggagggctcagaggagcctgacttgagtgt-gtc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 36331 159 + 138751 caggcagtgtggtcagataccaagggtgggagttgagaagtttgatc--------------cggcattttcactaaaccgactcagcaggattcttgctaa-attggcctaaaccggccaaggtcagggactggtcacagggagggctaagaggagcctgagtcaagtgtgatg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 351368 159 - 2409723 caggcagcgtggtcagataccaaggttgggagttgaggactttggtc--------------ggggattttcaccaaaccgactcagcaggattcttgctaa-attggcctaaaccggccaaggtcagggactggtcacagggagggctcagaggagcctgatgcgagtgtggtc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 515141 158 - 2125214 caagcagcgtggtcagacaccaagggtgggagttgaggactttggtc---------------gggattttcactaaaccgactcagcaggattcttgctaa-attggcctaaacctgccaaggtcagggactggtcacagggagggctcagaagaacctgactcgagtgtggtc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 105991 159 + 376347 caggcagcgtggtcagataccaaggttgggagttgaggactttggtc--------------ggggattttcactaaaccgactcagcacgattcttgctaa-attggcctaaaccggccaaggtcagggactggtcacagggagggctccgaggagcctgactccagtgtggtc i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2245411 144 - 8137123 CAGGTGGTGTG-------ACCCAggtggggtgcagagaggaatggatcaggtgtgtggagaggggatttctactaaa-tgactcggcaggattctttctaagactgaactaaatcatccaaggtcagCGACTTG----------------------CCTCATTCAAGTGGGGTC i otoGar3.GL873611 I 258 C 0 e canFam3.chr6 61032102 6136 - 77573801 I a score=3149187.000000 s hg38.chr7_KI270899v1_alt 143307 324 + 190869 aaaggagagagtctttgtcaTCTTTT-A--------AGAGGCGAGAGTGACGTATTAGTGAGAAACGGTG---------------AA------------GGGATCAAGCTCAGGCCAGCAGCCCCGAGTTTGAGATGAGGAC--------------------------AGGCTGGG----------TCCAGGAA---------GGGCT-----------------GCAGGAATAGGGGGCACCTGAGCCT-GCAGAAAGCGGGGAGCCCAGCCGCCAGAGC--AG------GCACCC------CCAGGCAGACCTCAGTGTGTCCTGCC-CTGTGGGAGTG-G-CAAGGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCGCCTAGAATTTGGATTGTAAT---------------------TTGTTATCGATGATATTGCTGCTTGGTCTCTCT s panTro5.chr7_NW_015973580v1_random 17557 324 - 83720 aaaggagagagtctttgtcaTCTTTT-A--------AGAGGCGAGAGTGACATATTAGTGAGAAACGGTG---------------AA------------GGGATCATGCTCAGGCCAGCAGCCCCGAGTTTGAGATGAGGAC--------------------------AGGCTGGG----------TCCAGGAA---------CGGCT-----------------GCAGGAATAGGGGGCACCTGAGCCT-GCAGAAAGCGGGGAGCCCAGCCGCCAGAGC--AG------GCACCC------CCAGGCAGACCTCAGTGTGTCCTGCC-CTGTGGGAGTG-G-CAAGGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCGCCTAGAATTTGGATTGTAAT---------------------TTGTTATCGATGATATTGCTGCTTGGTCTCTCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 533449 324 + 162613886 aaaggagagagtctttgtcaTCTTTT-A--------AGAGGCGAGAGTGACATATTAGTGAGAAACGGTG---------------AA------------GGGATCATGCTCAGGCCAGCAGCCCCGAGTTTGAGATGAGGAC--------------------------AGGCTGGG----------TCCAGGAA---------CGGCT-----------------GCAGGAATAGGGGGCACCTGAGCCT-GCAGAAAGCGGGGAGCCCAGCCGCCAGAGC--AG------GCACCC------CCAGGCAGACCTCAGTGTGTCCTGCC-CTGTGGGAGTG-G-CAAGGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCGCCTAGAATTTGGATTGTAAT---------------------TTGTTATCGATGATATTGCTGCTTGGTCTCTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 104756 323 - 432965 aaaggagagagtctttgtcaTCTTTT-A--------AGAGGCGAGAGTGACATATTAGTGAGAAACGGTG---------------AA------------GGGATCATGCTCAGGCCAGCAGCCCCGAGTTTGAGATGAGGAC--------------------------AGGCTGGG----------TCCAGGAG---------GGGCT-----------------GCAGGAATAGGGGGCACCTGGGCCT-GCAGAAAGCGGGGAGCCCCGCCCCCAGAGC--AG------GCA-CC------CCGGGCAGACCTCAGTGTGTCCTGCC-CTGTGGGAGTG-G-CAAGGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCGCCTAGAATTTGGATTGTAAT---------------------TTGTTATCGATGATATTGCTGCTTGGTCTCTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 165269 327 + 85365473 aaaggagagagtctttgccaTCTTTT-A--------AGAGGCGAAAGTGACATATTAGTGAGGAACGGTG---------------AA------------GGGATCATGCTCAGGCCAGCAGCCCCAAGTTTGAGATGAGGAC--------------------------AGGCTGGG----------TCCAGGAG---------AGGCT-----------------GCAGGAATAGGGGGCACCTAGGCCT-GCAGAAAGCGGGGAGCCCAGCCCCCAGAGC--AG------GCACCC------CCGGGCAGACCTCAGTGTGTCCTGCC-CTGTGGGAGCG-G-CAAGGCCAGACCAAGCTAGATGTGAACCAGTCCCACAACACCACCTAGGATTTGGATTGTAATTTG------------------TTGTTATCGATGATATTGCTGCTTGGTCTCTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34011176 345 + 185818997 aaaggagagggtctttgtcaTCTTTTAA--------AGAGGCGAGAGTGATGTATTAGTGAGAAACAGTG---------------AA------------GGGATCATGCCCAGGCCAGCAGCCCCGAATTTCAGATGAGGAC--------------------------AGGCTGGG----------TCTAGAAG---------GGGCT-----------------GCAGGAATA-GGGGCACCTGGGCCT-GCAGAAAGGTGGGAGCCCGGCACTCAGAGC--AG------GACCCC------CTGGGCAGACCTCAGTGTGTCCTGCC-CTATGGGAGTG-G-CAAAGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCACCTAGAATTTGGATTGTAATTTGTTATAGATGATATTTAATTTGTTATAGATGATACTGCGTCTTGGTCTCTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33627143 344 + 192294377 aaaggagagggtctttgtcaTCTTTT-A--------AGAGGCGAGAGTGATGTATTAGTGAGAAACAGTG---------------AA------------GGGATCATGCCCAGGCCAGCAGCCCCGAATTTCAGATGAGGAC--------------------------AGGCTGGG----------TCTAGAAG---------GGGCT-----------------GCAGGAATA-GGGGCACCTGGGCCT-GCAGAAAGGTGGGAGCCCGGCACTCAGAGC--AG------GACCCC------CTGGGCAGACCTCAGTGTGTCCTGCC-CTATGGGAGTG-G-CAAAGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCACCTAGAATTTGGATTGTAATTTGTTATAGATGATATTTAATTTGTTATAGATGATACTGCGTCTTGGTCTCTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4394364 344 - 9440265 aaaggagagggtctttgtcaTCTTTT-A--------AGAGGCGAGAGTGATGTATTAGTGAGAAACAGTG---------------AA------------GGGATCATGCCCAGGCCAGCAGCCCCGAATTTCAGATGAGGAC--------------------------AGGCTGGG----------TCTAGAAG---------GGGCT-----------------GCAGGAATA-GGGGCACCTGGGCCT-GCAGAAAGGTGGGAGCCCGGCACTCAGAGC--AG------GACCCC------CTGGGCAGACCTCAGTGTGTCCTGCC-CTATGGGAGTG-G-CAAAGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCACCTAGAATTTGGATTGTAATTTATTATAGATGATATTTAATTTGTTATAGATGATACTGCGTCTTGGTCTCTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16982391 344 - 21915920 aaaggagagggtctttgtcaTCTTTT-A--------AGAGGCGAGAGTGATGTATTAGTGAGAAACAGTG---------------AA------------GGGATCATGGCCAGGCCAGCAGCCCCGAATTTCAGATGAGGAC--------------------------AGGCTGGA----------TCTAGAAG---------GGGCT-----------------GCAGGAATA-GGGGCACCTGGGCCT-GCAGAAAGGTGGGAGCCCGGCACTCAGAGC--AG------GACCCC------CTGGGCAGACCTCAGTGTGTCCTGCC-CTATGGGAGTG-G-CAAGGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCACCTAGAACTTGGATTGTAATTTGTTATAGATGATATTTAATTTGTTATAGATAATACTGCGTCTTGGTCTCTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 117971 343 - 21531802 aaaggagagggtctttgtcaTCTTTT-A--------AGAGGCGAGAGT-ACGTATTAGTGAGAAACAGTG---------------AA------------GGGATCATG-CCAGGCCAGCAGCCCCGAGTTTCAGATGAGGAC--------------------------AGGCTGGG----------TCCAGAAG---------GGGCT-----------------GCAGGAATAGGGGGCACCTGGGCCT-GCAGAAAGGTGGGAGCCTGGCCCCCAGAGC--AG------GACCCC------CTGGGCAGACCTCAGTGTGTCCTGCC-CTGTGGGAGTG-G-CAAGGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCACCTAGAATTTGGATTGTAATTTGTTATAGATGGTATTTAACTTGTTATAGATGATATTGCATCTTGGTCTCTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 150580 344 - 2515279 aaaggagagggtctttgtcaTCTTTT-A--------AGAGGCGAGAGTGATGTATTAGTGAGAAACAGTG---------------AA------------GGGATCATGCCCAGGCCAGCAGCCCCGAATTTCAGATGAGGAC--------------------------AGGCTGGG----------TCTAGAAG---------GGGCT-----------------GCAGGAATA-GGGGCACCTGGGCCT-GCAGAAAGGTGGGAGCCCGGCACTCAGAGC--AG------GACCCC------CTGGGCAGACCTCAGTGTGTCCTGCC-CTATGGGAGTG-G-CAAGGCCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCACCTAGAATTTGGATTGTAATTTGTTATAGATGATATTTAATTTGTTATAGATGATACTGCATCTTGGTCTCTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 308175 345 + 6586416 aaaggagagggtctttgtcaTCTTTT-A--------AGAGGTGAGAGGGACGTGTTAGTGAGAAACAGTG---------------AA------------GGGATCATGTCCAGGCCAGCAGCCCCGAGTTTCAGATGAGGAT--------------------------AGACTGGG----------TCCAGGAG---------GGGCT-----------------GCAGGAATAGGGGGCACCTGGGCCT-GCAGAAAGGTGGGAGCCCGGCACCCAGAGC--AG------GACCCC------CTGGGCAGACCTCAGTGTGTCCTGCC-CTGTGGGAGTG-G-CAAGGTCAGACCAAGCTGGATGTGAACCAGTCCCAGAACACCACCTAGAATTTGGATTGTAATTTGTTATAGATGATACTTAATTTGTTATAGATGATATTGCTTCTTGGTCTCTCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 36490 327 + 138751 aaaggagagggtctttgtcaTATTTT-A--------AGAGGCA------AACTATTAGTGAGAAACAGTG---------------AA------------GGGATCACGCCCAGGCCAGCAGTCCCGAGTTTGAGATGAGGAC--------------------------ACACTAGG----------TCCACGAG---------GGACT-----------------GCAGGAATATTGGGCACATGGGACT-GCAGAAAG-TGGGAGCCCAGTA-CCAAAGC--AGGCCCCCGCCCCCGCCC--CCAGGCAGACTTCAGTGTGTCCTGCC-CTGTGGGCGTG-G-CAAGGCCAGACCAAGCTGGATGTAAACCAATCCCAGAATCGGGCCTAGAATTTGGATTGCAATT--------------------TTGTTTTAGATAATATTGCTGCTTGTTCTCTCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 351527 323 - 2409723 aaaggagagggtctttgtcaTATTTT-A--------AGAGGCAAGGGTGAAATATTAGTGAGAAACAGTG---------------AA------------GGAATCATGCCCAGGCCAGCAGTCCCTAGTTTGAGATGAGGAC--------------------------AGGCTGTG----------TCCAGGGG---------GGACT-----------------GCAGGAATACTGGGCACCTGGGACT-GCAGAAAG-TGGGAGGCCAGCA-CTAGA------------GCCCCCGCCC--CCAGGCAGACTTCAATGTGTCCTGCC-CTGTGGGCGTG-G-CAAGTCCAGACCAAGCTGGATGTAAACCAATCCCAGAATCTGGCCTAGAATTTGGATTGCAATT--------------------TTGTTTTAGATGATATTGCTGCCTGATCTCTCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 515299 323 - 2125214 aaaggagagggtctttatcaTATTTT-A--------AGAGGCAAGAGTGAAATATTAGTGAGAAACAGTG---------------AA------------GGGATCACGCCCAGGCCAGCAGTCCCTAGTTTGAGATGAGGAC--------------------------AGGCTGGG----------TCCAGGAG---------GGACT-----------------GCAGGAATATTGGGCATCTGGGACT-GCAGAAAG-TGGGAGGCCAGCA-CCAGA------------GCCCCCGCCC--CCAGGCAGACGTCAGTGTGTCCTGCC-CTGTGGGCGTG-G-CAAGGCCAGACCAAGCTGGATGTAAACCAATCCCAGAATCTGGCCTAGAATTTGGATTGCAATT--------------------TTGTTTTAGATGATGTTGCTGTTTGATTTCTCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 106150 328 + 376347 aaaggagagggtctttgtcaTGTTTT-A--------AGAGGCAAGAGTGAAATATTAGTGAGAAACAGTG---------------AA------------GGGATCACGCCCAGGCCAGCAGTCCCTCGTTTGAGATGAGGAC--------------------------AGGCTG-G----------TCCAGGAG---------GGACT-----------------GCAGGAATATTGGGCACCTGGGACT-GCAGAAAG-CGGGAGCCCAGCA-CCAGAGC--AG------CCCCCCGCCCCACCAGGCACACTTCAGTGTATCCTGCC-CTGTGGGCGTG-G-CAAGGCCAGACCAAGCTGGATGTAAACCAATCCCAGAATCCGGCCTAGAATTTGGATTGCAGTT--------------------TTGTTTTAGATGATATTGATGCTTGATCTCTCT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2245555 327 - 8137123 AAAGGAGAGAGTCTTTTTCATCCCTC-C--------CCAGGCAGGAGTGATATATTCATAAAAAACAGGGGAGAAAACCTGGGTCAA------------GGAGTCTGGCCCTGGCCAGCAGCAACGGGTTTGAAGTGAG-------------------------------ACTAGG----------TCTGGGAGTA-------AGGTT-----------------CCAGCTGAA---AGCA-----GTCT-GCAGAAAG----GAGCCAGCTGGCCAGTTCCTCG------GGCCCC------TCCGGCAAGTTTAAAGGTGTCCTCTCATTACACGTATG-GACAAAGTTAGACC-AGATAGATAAGTCCCAAGCCCAGAAGATGGCCTGCAGTTTGTACTATAAGT--------------------TTCTTTTAGAT-ATATTTCTGCTTGATGTGCAT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61038238 410 - 77573801 AAGGGGATGGGAGTATGTCATGTCCT-AATCACTGTATATGCAGGAGTGATGCATTCATACAAGACAATG---------------AAAACAAAGGTCAGAGAATCACAGCCAGGCCTGCAACCCAGTGTTTGGAATGAGAACAAGAAGTCCATGCTCAAGCTAAATGTAGGTTGGGAGGGAGGATCTCCAGGAGGAAGGCAGGGGACCTGGCACCTCCAGGGTGGGAAGGGGTGAGGGAGACTTGGACCTGGCAGATTGAAGGGGGTCAGGCCACCAAAGC--AAA-----GTCCCC------ATAAGCAAATTTGAATGTGTCCTGCA-TTATGGGCGAGAG-CAGTGTTAGACCAAGATAGACATGTATCAATCCCAGAATGTTGCCTGGAATTTCTATTCTAATT--------------------TGGTTTTAGATTATATTTCTGCTTGATCTCTTT i canFam3.chr6 I 6136 I 18 a score=188326.000000 s hg38.chr7_KI270899v1_alt 143631 35 + 190869 C---CTCTTCCTCCC-CAC-----------------------CCCCACCCAagatggagtct s panTro5.chr7_NW_015973580v1_random 17881 35 - 83720 C---CTCTTCCTCCC-CAC-----------------------CCCCACCCAagatggagtct i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 533773 35 + 162613886 C---CTCTTCCTCCC-CAC-----------------------CCCCACCCAagatggagtct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 105079 35 - 432965 C---CTCTTCCTCCC-CAC-----------------------CCCCACCCAagatggagtct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 165596 35 + 85365473 C---CTCTTCCTCCC-CGC-----------------------CCCCACCCAagatggagtct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34011521 55 + 185818997 CCTTCTCTTCCTCCT-CGC------TACCCCCCCACCACCATCCCGGCCCAagatggagtct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33627487 55 + 192294377 CCTTCTCTTCCTCCT-CGC------TACCCCCCCACCACCATCCCGGCCCAagatggagtct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4394708 55 - 9440265 CCTTCTCTTCCTCCT-TGC------TCCCCCCCCACCACCATCCCGGCCCAagatggagtct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16982735 56 - 21915920 CCTTCTCTTCCTCCT-CGCG-----CCCCCCCCCCCCACCACCCCGGCCCAagatggagtct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 118314 38 - 21531802 C---CTCTTCCTCCC-CGCGC--------------------CCCCGGCCCAagatggagtct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 150924 61 - 2515279 CCTTCTCTTCCTCCT-CGCGCCCCACCCCCCCCCCACACCACCCTGGCCCAagatggagtct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 308520 54 + 6586416 CCTTCTCTTCCTCCT-CGC-------ACCCCCCTACCACCACCCCGGCCCAAGTTggagtct i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 36817 40 + 138751 C---CACTCTGCCCTGCAC------TACC-------------CCCAGCCCAagaccgagtct i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 351850 43 - 2409723 CCTTCTCTCTGCCCTGCGC------TACC-------------CCCAGTCCAagactgagtct i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 515622 43 - 2125214 CCTTCTCTCTGCCCTGCGC------TACC-------------CCCAGCCCAagactgagtct i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 106478 43 + 376347 CCTCCTCTCTGCCCTGCGC------TACC-------------CCCAGCCCAagactgagtct i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2245882 22 - 8137123 C-------TTTTTCT-TAA--------------------------------AAATGGAATAT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61038648 18 - 77573801 I a score=2489620.000000 s hg38.chr7_KI270899v1_alt 143666 257 + 190869 ggctttgtcccccaggctggagtgcgatggcaggatctcggctcactgcaacctccgcctcctgggttcaaacaattctcctgcctcagcctcccaaatagcggggattactggtgcgtgccaccacacccagctaatttttgtatttttggtagagacggggtttcatcatgttggccaggctagtctcaaactcctgacgtcgtgatccgcccacctcagcctcccgaaatgctttgggattacgggtgtgagcc s panTro5.chr7_NW_015973580v1_random 17916 256 - 83720 ggctttgtcccccaggctggagtgcgatggcatgatctcggctcactgcaacctccgcctcctgggttcaaacaattctcctgcctcagcctcccaaatagcggggattactggtgcgtgccaccacacccagctaatttttgtatttttggtagagac-gggtttcatcatgttggccaggctagtctcaaactcctgacgtcgtgatccacccacctcgacctcccgaaatgctttgggattacaggtgtgagcc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 533808 256 + 162613886 ggctttgtcccccaggctggagtgcgatggcatgatctcggctcactgcaacctccgcctcctgggttcaaacaattctcctgcctcagcctcccaaatagcggggattactggtgcgtgccaccacacccagctaatttttgtatttttggtagagac-gggtttcatcatgttggccaggctagtctcaaactcctgacgtcgtgatccacccacctcgacctcccgaaatgctttgggattacaggtgtgagcc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 105114 257 - 432965 ggctttgtcccccaggctggagtgcgatggcacgatctcggctctctgcaacctccgcctcctgggttcaaacagttctcctgcctcagcctcccaaatagcggggattactggtgcgtgccaccacacccagctaatttttgtatttttggtagagacggggtttcatcatgttggccaggctagtctcaaactcctggcgtcgtgatccgcccacctcggcctcccgaaatgctttgggattacaggtgtgagcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 165631 251 + 85365473 ggctttgtcgcccaggctggagtgtggtggcacgatctcggctcactgcaacctccacctcccggg-tcaaacagttctcctgcctcagcctcccaaatagctgggattactggtgcgtgccaccacacccagctaatttttgtatttttggtagagactgggtttcatcacattggccaggctagtctcaaactcctgacatcgtgatccgcccgcctcggcctcccaaaatgc--tgagattacaggtgtga--- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34011576 255 + 185818997 ggctctgtcacccaggctggagtgtggtggcgcgatctcggctccctgcaacctctgcctcccgggttcaaacaattctcctgcctcagcctcccaaatagctgggattacaggtgcgtgccaccacacccagctaatttttgtatttttggtagagacagggtttcatcatgttggccaggctagtctcaaactcctgacgttgtgatccgcccacctcggcctcccaaaatgc--tgggattacaggcgtgagcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33627542 255 + 192294377 ggctctgtcacccaggctggagtgtggtggcgcgatctcggctccctgcaacctctgcctcccgggttcaaacaattctcctgcctcagcctcccaaatagctgggattacaggtgcgtgccaccacacccagctaatttttgtatttttggtagagacagggtttcatcatgttggccaggctagtctcaaactcttgacgtcgtgatccgcccacctcggcctcccaaaatgc--tgggattacaggcgtgagcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4394763 255 - 9440265 ggctctgtcacccaggctggagtgtggtggcacaatctcggctccctgcaacctctgcctcccgggttcaaacaattctcctgcctcagcctcccaaatagctgggattacaggtgcgtgccaccacacccagctaatttttgtatttttggtagagacagggtttcatcatgttggccaggctagtctcaaactcctgacgtcgtgatccgcccacctcggcctcccaaaatgc--tgggattacaggcgtgagcc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16982791 255 - 21915920 ggctctgtcacccaggctggagtgtggtgacgcgatctcggctccctgcaacctctgcctcccgggttcaaacaattctcctgcctcagcctcccaaatagctgggattacaggtgcgtgccaccacacccagctaatttttgtatttttggtagagacggggtttcatcatgttggccaggctagtctcaaactcctgacgtcgtgatccgcccacctcggcctcccaaaatgc--tgggattacaggcgtgagcc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 118352 255 - 21531802 ggctctgtcactcaggctggcatgcggtggcgcgatctcggctcactgcaacctccgcctcccgcgttcgaacaattctcctgcctcagcctcccaaatagctgggattacaggtgcgtgccaccacacccagctaatttttgtatttttggtagagatggggtttcatcatgctggccaggctagtctcaaactcctgacgtcgtgatccacccgcctcggcctcccaaaatgc--tgggattacaggcgtgagcc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 150985 255 - 2515279 ggctctgtcacccaggctggagtgcggtggcgcaatctcggctccctgcaacctctgcctcccgggttcaaacaattctcctgcctcagcctcccaaatagctgggattacaggtgcgtgccaccacacccagctaatttttgtatttttggtagagacggggtttcatcatgttggccaggctagtctcaaactcctgacgtcgtgatccgcccacctcggcctcccaaaatgc--tgggattacaggcgtgagcc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 308574 255 + 6586416 ggctctgtcacccaggctggagtaccttggcgcgatcttggctcactgcaacctccacctcccgggttcaaacaattctcctgcctcagcctcccaaatagctgggattacgggtgtgtgccaccacacccagctaatttttgtatttttgatagagacgggatttcatcatgttggccaggccagtctcaaactcctgacgtcgtgatccgcccacctcggcctcccaaaatgc--tgggattacaggcgtgagcc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 36857 255 + 138751 tgctttgtcgcccaggctggggtgcagtgacaccatctcggctcactggaacctccacctcccaggttcaagtgattctcctgcctcagcttcccaaatagctgaaattacaggtgcacaccgccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctagtctcaaactcctgacctcgtgatccacctgcctcggcctcccagagtgc--tgggattacaggcctgagcc i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 351893 255 - 2409723 tgctctgtcgcccaggctggagtgcagcggcaccatctcggctcactgcaacctccacctcccaggtgcaagtgattctcctgcctcagcctcccaaatagctgaaattacaggtgcacaccaccacacccagccaatttttgtatttttagtagagatggggtttcaccatgttggccaggctagtctcaaactcctgacctcgtgatccacctgcctcagcctcccaaagtgc--tgggattacaggcctgagcc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 515665 255 - 2125214 tgctttgtcgcccaggctgaagtgcagtggcaccatctcggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccgaataactgaaattacaggtgcacaccaccacacccagctaaattttgtatttttagtagagacggggtttcaccatgttggccaggctagtctcaaactcctgacctcatgatccacctgccttggcctcccaaactgc--tgggattacaggcctgagcc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 106521 255 + 376347 tgctctgtcgcccagtctggagtgcaatggcaccatctcggctcactgcagcctccgcctcccaggttcaagtgattctcctgcctcagcctcccaaatagctgaaattacaggtgcacaccgccacacccagctaatttttgtatttttagtagagacggggtttcaccatgttagtcaggctggtgtcaaactcctgagcttgtgattcacccacctcagcctcccgaagtgt--tgggattacaggtgtgagcc i aotNan1.NW_018514293v1 C 0 I 66 e otoGar3.GL873611 2245904 0 - 8137123 C e canFam3.chr6 61038648 18 - 77573801 I a score=94547.000000 s hg38.chr7_KI270899v1_alt 143923 9 + 190869 gccgcgccG--------- s panTro5.chr7_NW_015973580v1_random 18172 18 - 83720 gccgcgcccggccTCTAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 534064 18 + 162613886 gccgcgcccggccTCTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 105371 18 - 432965 gtcgcgcccggccTCTAT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34011831 18 + 185818997 actgcacccggccTCTAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33627797 18 + 192294377 actgcacccggccTCTAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4395018 18 - 9440265 actgcacccggccTCTAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16983046 18 - 21915920 actgcgcccggccTCTAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 118607 18 - 21531802 actgcacctggccTCTAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 151240 18 - 2515279 actgcgcccggccTCTAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 308829 18 + 6586416 gctgcgcccagccTCTAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 37112 18 + 138751 acctcgtctggccTCTAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 352148 18 - 2409723 acctcttctggccTCTAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 515920 18 - 2125214 acctcgtctggccTCTAC i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2245904 0 - 8137123 C e canFam3.chr6 61038648 18 - 77573801 I e aotNan1.NW_018514293v1 106776 66 + 376347 I e nomLeu3.chr20 165882 0 + 85365473 C a score=4127747.000000 s hg38.chr7_KI270899v1_alt 143932 440 + 190869 AGCATGGCCATCGTGGCTACATCAGTCCCGGCTAATAGAGATTTTAGCACACTCAGATTCTATTGGCTAATAAGATTTAATTATAATTCTGGGGTATTTAACAATGTCGTT-ATACAGTCTTCATTGTTGCAAATGGAGAATGAAATCGGGTGCATGTGACACTAATATGACCTGTTCATGCTCTGTCACTTAAACGGAGTTAAGTAACATAGCCCTGAGCAGGAAGA--------------CTCCTTCCCCACTTCTGTCCAGGAGCTCCTTACTCGATTCT-GGGGAACAGAAAGGCTTTCAGCGGCCAAGGGGAGTGACAACAGCCAGACATGAGACACCTCCTAGAGCCCTTTGGTGTTACCCTTTCCGG-TCCATCAGCCACAGTGTCCACCCCAGGTAGCT-GGGTCCTGAGTTCACCG--TCTCAGGACATTTTTCGACCTGGTTTGTCTGAA s panTro5.chr7_NW_015973580v1_random 18190 440 - 83720 AGCATGGCCATCGTGGCTACATCAGCCCCGGCTAATAGAGATTTTAGCACACTCAGATTCTATTGGCTAATAAGATTTAATTATAATTCTGGGGTATTTAACAATGTCGTT-ATACAGTCTTCACTGTTGCAAATGGAGAATGAAATCGGGTGCATGTGACACTAATGTGACCTGTTCATGCTCTGTCACTTAAACGGAGTTAAGTAACATAGCCTTGGGCAGGAAGA--------------CTCCTTCCCCACTTCTTTCCAGGAGCTCCTTACTCGATTCT-GGGGAACAGAAAGGCTTTCAGCAGCCAAGGGGAGTGACAACAGCCAGACATGAGACACCTCCTAGAGCCCTTTGGTGTTACCCTTTCCGG-TCCATCAGCCACAGTGTCCACCCCAGGTAGCT-GGGTCCTGAGTTCACCG--TCTCAGGACATTTTTCGACCTGGTTTGTCTGAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 534082 440 + 162613886 AGCATGGCCATCGTGGCTACATCAGCCCCGGCTAATAGAGATTTTAGCACACTCAGATTCTATTGGCTAATAAGATTTAATTATAATTCTGGGGTATTTAACAATGTCGTT-ATACAGTCTTCACTGTTGCAAATGGAGAATGAAATCGGGTGCATGTGACACTAATGTGACCTGTTCATGCTCTGTCACTTAAACGGAGTTAAGTAACATAGCCTTGGGCAGGAAGA--------------CTCCTTCCCCACTTCTTTCCAGGAGTTCCTTACTCGATTCT-GGGGAACAGAAAGGCTTTCAGCAGCCAAGGGGAGTGACAACAGCCAGACATGAGACACCTCCTAGAGCCCTTTGGTGTTACCCTTTCCGG-TCCATCAGCCACAGTGTCCACCCCAGGTAGCT-GGGTCCTGAGTTCACCA--TCTCAGGACATTTTTCGACCTGGTTTGTCTGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 105389 440 - 432965 AGCATGGCCATCGTGGCTACATCAGTCCCGGCTAATAGAGATTTTAGCACACTCAGATTCTATTGGCTAATAAGATTTAATTATAATTCTGGGGTATTTAACAATGTCGTT-ATACAGTCTTCATTGTTGCAAGTGGAGAATGAAATCGGGTGCATGTGACACTAATGTGACCTGTTCATGCTCTGTCACTTAAACGGAGTTAAGTAACATAGCCCTGGGCAGGAAGA--------------CTCCTTCCCCACTTCTGTCCAGGAGCTCCTTACTCTATTCT-GGGGAACAGAAAGGCTTTCAGCGGCCAAGGGGAGTGACAACAGCCAGAAATGAGACACCTCCTAGAGCCCTTTGGTGTTACCCTTTCCGG-TCCATCAGCCACAGTGTCCACCCCAGGTAGCT-GGGTCCTGAGTTCACCA--TCTCAGGACATTTTTCGACCTGGTTTGTCTGAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 165882 434 + 85365473 ------gccattgtgGCTACATCGGTCCCGGCTAACAGAGATTTTAGCGCACTCAGATTCTGTTGGCTAATAAGAATTAGTTATAATTCTGGGGTATTTAACAATGTCGTT-ATATAGTCTTCAGTGTTGCAAATGGAGAATGAAATCAGGTGCATGTGACACTAATGTGACCTGTTCATGCTCTGTCACTTAAACAGAGTTAAGTAACACAGCCCTGGGCGGGAAGA--------------CTCCTTCCCCACTTCTGTCCAGGAGCTCCTTACTCAATTCT-GGGGAACAGAAAGGCTTTCAGCGGTGAAGGGGAGTGACAACAGCCAGAAATGAGACACCTCCCAGAGCCCTTTGGTGTTACCCTTTCCGG-TCCATCAGCCACAGCATCCACCCCAGGTAGCT-GGGTCCTGAGTTCACCA--ACTCAGGACATTTTTCGACCTGGTTTGTCTGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34011849 455 + 185818997 AGCACGGCCATTGTGGCTACATCAGTCCCGGCTAATAGAGATTTTAGTGCACTCAGATTCTGTTGGCTAGTAAGAATTAATTATAATTCTGGGGTATTTAACGGTGTCGTT-ACGCAGTTTTCATTGTTGCAGATGGAGAATGAAATCGGGTGCATGTGACAGTAATGTGACCTGTTCATGCTCCCTCACTTAAACGGAGTTAAGTAACATGGCCCTGGGCAGGAAGACCCGGTCACTGGGGCTCCTTCCCCACTTCTGTCCGGGAGCTCCTTACTCGATTCT-GGGGAGCGGAAAGGCTTTCAGCGGTCAAGGGGAGTAACAACAGCAAGAAATAAGACACCTCTCAGAGTCCTTTGGTGTTGCCCTTTCCGGATCCATCAGCCACAGTGTCCACCCCAGGTAGCT-GGGTCCTGAGTTCCCCA--TCTCAGGACACCTTTCGACCTGGTTTGTCTGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33627815 456 + 192294377 AGCACGGCCATTGTGGCTACATCAGTCCCGGCTAATAGAGATTTTAGTGCACTCAGATTCTGTTGGCTAGTAAGAATTAATTATAATTCTGGGGTATTTAACGGTGTCGTTAATGCAGTTTTCATTGTTGCAGATGGAGAATGAAATCGGGTGCATGTGACAGTAACGTGACCTGTTCATGCTCCCTCACTTAAACGGAGTTAAGTAACATGGCCCTGGGCAGGAAGACCCGGTCACTGGGGCTCCTTCCCCACTTCTGTCCGGGAGCTCCTTACTCGATTCT-GGGGAGCGGAAAGGCTTTCAGCGGTCAAGGGGAGTAACAACAGCAAGAAATAAGACACCTCTCAGAGTCCTTTGGTGTTGCCCTTTCCGGATCCATCAGCCACAGTGTCCACCCCAGGTAGCT-GGGTCCTGAGTTCCCCA--TCTCAGGACACCTTTCGACCTGGTTTGTCTGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4395036 455 - 9440265 AGCACGGCCATTGTGGCTACATCAGTCCCGGCTAATAGAGATTTTAGTGCACTCAGAATCTGTTGGCTAGTAAGAATTAATTATAATTCTGGGGTATTTAACGGTGTCGTT-ACGCAGTTTTCATTGTTGCAGATGGAGAATGAAATCGGGTGCATGTGACAGTAACGTGACCTGTTCATGCTCCCTCACTTAAACGGAGTTAAGTAACATGGCCCTGGGCAGGAAGACCCGGTCACTGGGGCTCCTTCCCCACTTCTGTCCGGGAGCTCCTTACTCGATTCT-GGGGAGCGGAAAGGCTTTCAGCGGTCAAGGGGAGTAACAACAGCAAGAAATAAGACACCTCTCAGAGTCCTTTGGTGTTGCCCTTTCCGGATCCATCAGCCACAGTGTCCACCCCAGGTAGCT-GGGTCCTGAGTTCCCCA--TCTCAGGACACCTTTCGACCTGGTTTGTCTGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16983064 455 - 21915920 AGCATGGCCATTGTGGCTACATCAGTCCCGGCTAATAGAGATTTTAGTGCACTCAGATTCTGTTGGCTAGTAAGAATTAATTATAATTCTGGGGTATTTAACGGTGTCGTT-ACGCAGTTTTCATTGTTGCAGATGGAGAATGAAATCGGGTGCATGTGACAGTAACGTGACCTGTTCATGCTCCCTCATTTAAACGGAGTTAAGTAACATGGCCCTGGGCAGGAAGACCTGGTCACTGGGGCTCCTTCCCCACTTCTGTCCGGGAGCTCCTTACTCGATTCT-GGGGAGCGGAAAGGCTTTCAGCGGTCAAGGGGAGTAACAACAGCAAGAAATAAGACACCTCTCAGAGTCCTTTGGTGTTGCCCTTTCCGGATCCATCAGCCACAGTGTCCACCCCAGGTAGCT-GGGTCCTGAGTTCCCCA--TCTCAGGACACCTTTCGACCTGGTTTGTCTGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 118625 455 - 21531802 AGCATGGCCATTGTGGCTACATCAGTCCCGGCTAATAGAGATTTCAGTGCACTCAGATTCTGTTGGCTAATAAGAATTAATTATAATTCTGGGGTATTTAACGATGTCGTT-ACGCAGTTTTCATTGCTGCAGATGGAGAATGAAATCGGGTGCTTGTGACAGTAACATGACCTGTTCATACCCCCTCACTTAAACGGAGTTAAGTAACATGGCCCTGGGCAGGAAGACGCGGTCACTGGGGCTCCTTCCCCACCTCTGTCCAGAAGCTCCTTACTCGATTCT-GGGGAGCGGAAAGGCTTTCAGCGGTCAAGGGGAGTAACAACAGCAAGAAATAAGATACCTCCCAGAGTCCTTTGGTGTTGCCTTTTCCGGATCCATCAGCCACAGCGTCCACCCCAGGTTGCT-GGGTCCTGAGTTCCCCA--TCTCAGGACATCTTTCGACCTGGTTTGTCTGAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 151258 456 - 2515279 AGCATGGCCATTGTGGCTATATCAGTCCCGGCTAATAGAGATTTTAGTGCACTCAGATTCTGTTGGCTAGTAAGAATTAATTATAATTCTGGGGTATTTAACGGTGTCGTT-ACGCAGTTTTCATTGTTGCAGATGGAGAATGAAATCGGGTGCATGTGACAGTAACGTGACCTGTTCACGCTCCCTCACTTAAACGGAGTTAAGTAACATGGCCCTGGGCAGGAAGACCTGGTCACTGGGGCTCCTTCCCCACTTCTGTCCGGGAGCTCCTTACTCGATTCTGGGGGAGCAGAAAGGCTTTCAGCGGTCAAGGGGAGTAACAACAGCAAGAAATAAGACACGTCTCAGAGTCCTTTGGTATTGCCCTTTCCGGATCCATCAGCCACAGTGTCCACCCTAGGTAGCT-GGGTCCTGAGTTCCCCA--TCTCAGGACACCTTTCGACCTGGTTTGTCTGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 308847 456 + 6586416 AGCATGGCCATTGTGGCTACATCAGTCCCGGCTAATAGAGATTTTAGTGCACTCAGATTCTG-TGGCTAAAAAGAGTCAATTATAATTCTGGGGTATTTAACGACGTCGTTAACGCAGTTTTCATTGTTGCAGATGGAGAATGAAATCGGGTGCATGTGACAGTAACATGACCTGTTCATGCTCCCTCACTTAAACAGAGTTAAGTAACATAGCCCTGGGCAGGAAGACCCGGTCACTGGGGCTCCTTCCCCACTTCTGTCCGCGAGCTCCTTACTCGATTCT-GGGGAGCGGAAAGGCTTTCAGCTGTCAAGGGGAGTAACAACAGCCAGAAATGAGATACCTCCCAGAGCCCTTTGGTGTTGCCCTTTTCGGATCCATCAGCCACAGCGTCCACCCCAGGTAGCTGGGGTCCTGAGTTCCCCA--TCTCAGGACACCGTTCGACCTGGTTTGTCTGAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 37130 451 + 138751 GGCATGGCCATTGTGGCTACATCTGTCCCGGCTAACAGAGATTTTAGTGCAATCAGATTCTATTGGCTAATAAGAATTAATTATAATTCTGGGGTATATAACAATGTCGTT-AGGCAGTTTTCATTGTTGCAAATGGAGGATGAAATC----GCATGTGACACTAATGTGACCTGTTCATGCTCTGTCACTTAAATGGAGTAAAGTAATATGGCCCTGGGCAGGAAGACCTCGTCACTGGGACAGTTTCCCCACTTCTGTCCAGGAACCCCTTACTCAATTCT-GGGGAGCGTAAAGGCTCTCAGCGGTCAAGGGGAGTAACAACAGACAGAAATGAGACACCTCCCAGAGCCCTTCCATGCTGCCCTTTCAGGATCTATCAGCCACGGCATCCACCCTAGGTGGCA-GGGTTCCAAGTTTCCCA--TCTCAGAACATCTTTCAACCTGGTTTGTCTGAA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 352166 455 - 2409723 AGCATGGCCATTGTGGCTACATCCGTCCCAGCTAACCGTAATTTTAGTGCACTCAGATTCTGTTGGCTAATAAGAATTAATTGTAATTCTGGGGTATATAACAATGTCATT-ACGCAGTTTTCATTGTTGCGAACGGAGAATGAAATCACGTGCATGTGACACTAGTGTGACCTGTTCATGCTCTGTCACTTAAATGGAGTGAAGTAACATAGCCCTGGGCAGGAAGACCTCGTCACTGGGACAGTTTCCCCTCTTCTGTCCAGGAGCCCCTTATGCAATTCT-GGGGAGTGTAAAGGCTCTCAGCGGTCAACGGGAGTAACGACAGACAGGAGTGAGACACCTTCCAGAGCCCTTCCATGCTGCTCTTCCATGATCTGTCAGCCACAGCGTCCACCCTAGGTGGCA-GGGTTCCGAGTTCCCCA--TCTCAGAACATCTTTCAACCTGGTTTGTCTGAA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 515938 450 - 2125214 AGTGTGGCCATTGTGGCTACATCCGTCCTGGCTAACAGAGATTTTAGTGCACTCAGATTCTATTGACTAATAAGAATTAATTATAATTCTGGGGTATATAACAATGTCGTT-ACGCAGTTTTCATTGTTGCAAATGGAGAATTAAATCACGTGCATGTGACACTAATGTGACCTGTTCATGCTTTGTCAGTTAAATGGAGTAAAGTAACATAGCCCTGGGCAGGAAGACCT-----CTGGGACACTTTCCCCACTTCTGTCCAGGAGCCGCTTACTCAATTCT-GGGGAGCGTAAAGGCTCTCAGCGGTCAACGGGAGTAACAACAGACAGGAACGAGACACCTTCCAGAGCCCTTCCGTGCTGCTCTTTCATGATCTGTCAGCCATGGCATCCACCCTAGGTGGCG-GGGTTCTGAGTTCTCCA--TCTCAGAACATCTTTCAACCTGGTTTGTCTGAA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2245904 415 - 8137123 AGTACAGCAATTACGGTTATATTGGTTCTGGTTAATCACGATTTTAGTGCACGGAGATTTTATTGGTTAATTAGAATTGATTATAGTTTTGTGATATTTAAC-ACGTTGTT-ATGCAATTTCCACTGTGGCAAACAGAGAAAGGAGTCATATGTAC------CTATAATGACCTGTTCATCATCTGTACCTGTAATAGGCCTATATGAGGTAGCCCTGGGCAG--AGGCACTGTC-TTAGACCTGCTTCCTCATGTC-----------------CTCTACTCT-GGGCAGTAGAGAGGCTCTCAGAGGCCAA--GGAGTGAGGACAGGCAGA-ATGGGGCATCTCACTGA-CCCTTCCATGCCGCCTTTTCTAGACTCACCAGCCTC----CACATCCTAGATGGCT-CAGCTC-AAGT---CCC--TGTCAAGA-ATGCTTTGACCTGGTTTGTCTGCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61038666 420 - 77573801 AACATGGCAATTCTAGCTATCTCAGTTCTGGTTCATCAATATTTTA----------------TTGGCTAATTAGAATTAATTATAATTCTGGGATACTTAACAATGCCATT-ATGCAATTTCCACTGTTGCCAGTGGAGAGTGAGATCAAGTGCATGTGGCGCCAACAGAATCTGTTCCTTATCAGCCACTCTAATGGGGTCACATAGTGTAGCCCTGGGTGGG-TGACCCAGTCACTGAA-CTGCCTCCACAACCCTA-CCAGAAGCCCCAGACTCAATCCT-GGGGAGTTGAAAGCACTTCAAGGATCAA-GGGAATAATGACAGACATAGATGAGACAGCTCACAGGATCCTTTAGCGGGATCTTTTCAAG----------------ATCCAGCCCAGATGGCT-TGTTCCTGAGTTCCCTCATTATCAATAGACGTTTTATCCT-GTTTATCTGAA i canFam3.chr6 I 18 C 0 e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=34044.000000 s hg38.chr7_KI270899v1_alt 144372 4 + 190869 TTAT s panTro5.chr7_NW_015973580v1_random 18630 4 - 83720 TTAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 534522 4 + 162613886 TTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 105829 4 - 432965 TTAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 166316 4 + 85365473 TTAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34012304 4 + 185818997 TTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33628271 4 + 192294377 TTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4395491 4 - 9440265 TTAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16983519 4 - 21915920 TTAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 119080 4 - 21531802 TTAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 151714 4 - 2515279 TTAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 309303 4 + 6586416 TTGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 37581 4 + 138751 TCAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 352621 4 - 2409723 TCAT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 516388 4 - 2125214 TCAG i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61039086 4 - 77573801 TTAT i canFam3.chr6 C 0 I 140 e otoGar3.GL873611 2246319 0 - 8137123 C e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=1368461.000000 s hg38.chr7_KI270899v1_alt 144376 177 + 190869 TATTATTATTGATCAttgagacagggtctcagtccatcgccaagactggagtgcagtggtgtgatcctggcttactcagcctcccaggctcaggtgatcctcccagctcagcctcctgcgtagctgggaccacaggcaggcaccaccatgcctggctaaa--ttttttgtattttttgt s panTro5.chr7_NW_015973580v1_random 18634 177 - 83720 TATTATTATTGATCAttgagacagggtctcagtccatcgccaagactggagtgcagtggtgtgatcctggctcactcagcctcccaggctcaggtgatcctcccagctcagcctcctgcgtagctgggaccacaggcaggcaccaccatgcctggctaaa--ttttttgtattttttgt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 534526 177 + 162613886 TATTATTATTGATCAttgagacagggtctcagtccatcgccaagactggagtgcagtggtgtgatcctggctcactcagcctcccaggctcaggtgatcctcccagctcagcctcctgcgtagctgggaccacaggcaggcaccaccatgcctggctaaa--ttttttgtattttttgt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 105833 178 - 432965 TATTATTATTGATCAttgagacagggtctcagtccatcgccaagactggagtgcagtggtgtgatcctggctcactcagcctcccaggctcaggcgatcctcccagctcagcctcccgtgtagctgcgaccacaggcaggcaccaccatgcctggctaaa-tttttttgtattttttgt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 166320 179 + 85365473 TATTATTATTGATCAttgagacagggtctcagtccatcgccaagactggagtgcagtggtgtgatcctggctcactcaacctcccaggctcaggcgatcctcccagctcagcctcctgcgtagctgggaccacaggcaggcaccaccatgcctggttattttttttttttattttttgt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34012308 177 + 185818997 TATTATTATTGATCACtgagacagggtctcagtccattgccaagactggagtgcaatggtgtgatcatggctcacttgacctcccaggcgcaggcgatcctcccacctcagcctcctgagtagctgggaccacaggcaggcgccaccatgcctggctaac--ttttttgtattttttgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33628275 177 + 192294377 TATTATTATTGATCACtgagacagggtctcagtccattgccaagactggagtgcaatggtgtgatcatggctcacttgacctcccaggcgcaggcgatcctcccacctcagcctcctgagtagctgggaccacaggcaggcgccaccatgcctggctaac--ttttttgtattttttgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4395495 176 - 9440265 TATTATTATTGATCACtgagacagggtctcagtccattgccaagactggagtgcaatggtgtgatcatggctcacttgacctctcaggcgcaggcgatcctcccacctcagcctcctgagtagctgggaccacaggcaggcgccaccatgcctggctaa---ttttttgtattttttgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16983523 176 - 21915920 TATTATTATTGATCACtgagacagggtctcagtccattgccaagactggagtgcaatggtgtgatcatggctcacttgacctcccaggctcaggcgatcctcccacctcagcctcctgagtagctgggaccacaggcaggcgccaccatgcctggctaa---tgttttgtattttttgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 119084 177 - 21531802 TATTATCATTGATCAttgagacagggtctcagtccattgccaagactggagtgcagtggtgtgatcatggctcactcgacctcccaggctcaggcgatcgtcccacctcagcctcctgagtagctgggaccacaggcaggtgccaccatgcctggctaac--ttttttgtttttttcgt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 151718 176 - 2515279 TATTATTATTGATCACtgagacagggtctcagtccattgccaagactggagtgcaatggtgtgatcatggctcacttgacctcccaggctcaggcgatcctcccacctcagcctcctgagtagctgggaccacaggcaggcgccaccatgcctggctaa---tgttttgtattttttgt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 309307 177 + 6586416 TATTATCATTGATCAttgagacagagtctcagtccattgccaagactggagtgcagtggtgtgatcatggctcactcgacctcccaggctcaggcgatcctcccacctcagcctcctgtgtagctgggaccacaggcaggcgccaccatgcctggctaaa--ttttttgtgttttttgt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 37585 140 + 138751 TATCATTATTGATCAttgagacagagcctcaatccatcaccaaggctggagtgcagtggtgtgatcatggctctctagatctcccaggcttagg----cctccta-cccagcctcc--------------------------------tgcctggctaat--ttttttgtattttttgt i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 352625 145 - 2409723 TATCATTATTGATCATGgagacagggcctcaatccatcgccaaggctggagcgcagtggtgtgatcatggctctctcaacctcccaggcttaggtgatcctcccaccccagcctcc--------------------------------tgcctggctaat--ttttttgtattttttgt i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 516392 145 - 2125214 TATCATTATTGATCAttgagacagggcctcaatccatcaccaaggctggagtgcagtggtgtgatcatggctctcttgacctcccaggcttaggcgatcctcccactgcagccttc--------------------------------tgcctgactgat--ttttttgtattttttgt i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2246319 0 - 8137123 C e canFam3.chr6 61039090 140 - 77573801 I e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=845870.000000 s hg38.chr7_KI270899v1_alt 144553 105 + 190869 agagaccagctctcgctatgtt-------------------------------------------------gtccaggttggtctcaaactgctgcctcagcctcccaaggtgctgggattacaggcatgagggaccaagctcagcAATCTGAA- s panTro5.chr7_NW_015973580v1_random 18811 105 - 83720 agagaccagctctcgctatgtt-------------------------------------------------gtccaggttggtctcaaactgctgcctcagcctcccaaggtgctgggattacaggcatgagggaccaagctcagcAATCTGAA- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 534703 105 + 162613886 agagaccagctctcgctatgtt-------------------------------------------------gtccaggttggtctcaaactgctgcctcagcctcccaaggtactgggattacaggcatgagggaccaagctcagcAATCTGAA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 106011 105 - 432965 agagacaagctctcgctatgtt-------------------------------------------------gtccaggttggtctcaaactgctgcctcagcctcccaaggtgctgggattacaggcgtgagGGACCAAGCTCAAAAATCTGAA- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 166499 104 + 85365473 agagaccagctctcactctgtt-------------------------------------------------gcctgggttggt-tcaaactgctgcctcagcctcccaaggtgctgggattacaggcgtgagcgaccaagctcagcAATCTGAA- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34012485 105 + 185818997 agagaccaggtttctctgtctt-------------------------------------------------gtccaggttggtctcaaactgctgcctcagcctcccaaggtgctgggattacaggcatgagccaccaagctcagcAATCTGAA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33628452 105 + 192294377 agagaccaggtttctctgtctt-------------------------------------------------gtccaggttggtctcaaactgctgcctcagcctcccaaggtgctgggattacaggcatgagccaccaagctcagcAATCTGAA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4395671 105 - 9440265 agagaccaggtttctctgtctt-------------------------------------------------gtccaggttggtctcaaactgctgcctcagcctcccaaggtgctgggattacaggcatgagccaccaagctcagcAATCTGAA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16983699 105 - 21915920 agagaccaggtttctctgtctt-------------------------------------------------gtccaggttggtctcaaactgctgcctcagcctcccaaggtgctgggattacaggcatgagccaccaagctcagcAATCTGAA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 119261 105 - 21531802 agagaccaggtttcaccgtgtt-------------------------------------------------gtccaggttggtctcagactgctgcctcagcctcccaaggtgctgggattacaggcatgagccaccaagctcagcAATCTGAA- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 151894 105 - 2515279 agagaccaggtttctctgtctt-------------------------------------------------gtccaggttggtctcaaactgctgcctcagcctcccaaggtgctgggattacaggcatgagccaccaagctcagcAATCTGAA- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 309484 154 + 6586416 agagaccaggtttcactgtgttgaccaacctggacaacttggtctcaaagttgaccaacctggagaacttggtccaggttggtctcaaactgctgcctcagcctcccagggtgctgggattacaggcatgagccaccaagctcagcAATCTGAA- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 37725 105 + 138751 agagatggggtcccacgatgtt-------------------------------------------------gtccagtttggtctcagactgctgccttggcttcccaaagtgctgggattataggcgtgagccaccaagctcagcAATCTGAA- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 352770 105 - 2409723 agagatggggtctcgtgatgtt-------------------------------------------------gtcaaggttcgtctcaaactgctgccttggcttcccaaagtgctgggattacaggtgtgagccaccaagctcagcAATCTGAA- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 516537 105 - 2125214 agagattgcatctcacgatgtt-------------------------------------------------gtccaggttcgtctcaaactgctgtcttggcctcccaaagtgctgggattacaggcgtgagccaccaagctcagcAATCTGAA- i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61039230 90 - 77573801 GAAggccagc-----ctgggtg-------------------------------------------------gctcag--tggtttagcgctgc--cttcagccc----agggcctgatcctggagacctggg--accgagtcccgc-atcaggct i canFam3.chr6 I 140 C 0 e otoGar3.GL873611 2246319 0 - 8137123 C e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=5938678.000000 s hg38.chr7_KI270899v1_alt 144658 715 + 190869 TTATTTATGCAGAA-TTTTTTTTTCTCTAGCTGGAAGAGCTGTTTATATGCACGTTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGA-----TTTTTTTTTTCCAAGCCATTC-CTGGGGGATTCCTGGGAGCCATGTGGGAGAGGCGTGAGGAAGTGAGACCTTCACCCCGAGACAGGTCCTGACACACCCTCTGGTGC-C-TCTACTCAAGTGAGGTGAGAGGGGAAACTG--GTGTATTTTTAGATGAAGTTTCCT-TGGGAAATTGTTTCTATTTTAT-----ATTTTATCAGTAAT--------------CCCCTGGCTAATGTTTTAAACCAATATTTATAACACTGCCTCAGAGCTTTGGAATAAACAGATTTCCATAAAGAAAAGCTGCTTTAGAGTGCTACACTGTAAGAGGGGCCGGGCAAACAAGAAGGGACGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTCAGGACACACAGAGAGC--CCGAAAACGAGGCAGAGGTGAGCGGGGACCAGCAGCACAGCGGCACTGACGC--GCCAGG----GACTTGGGCTCTGCTGGCCTCCTCCCTCGCGGCCAGCAGTGGCAGTGGTGGGAGTAGGCCtggcttgtctgt-ggttgcctttgttgctttaattgaaagtactcaaggctatttcttgtcgcgtcatttctgacagtgtccggtggtccctaccctgtaatgccaggaggttccagccccacccttccctcc s panTro5.chr7_NW_015973580v1_random 18916 715 - 83720 TTATTTATGCAGAA-TTTTTTTTTCTCTAGCTGGAAGAGCTGTTTATATGCACGTTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGA-----TTTTTTTTTTCCAAGCCATTC-CTGGGGGATTCCTGGGAGCCATGTGGGAGAGGCGTGAGGAAGTGAGACCTTCACCCCGAGACAGGTCCTGACGCACCCTCTGGTGC-C-TCTACTCAAGTGAGGTGAGAGGGGAAACTG--GTGTATTTTTAGATGAAGTTTCCT-TGGGAAATTGTTTCTATTTTAT-----ATTTTATCAGTAAT--------------CCCCTGGCTAATGTTTTAAACCAATATTTATAACACTGCCTCAGAGCTTTGGAATAAACAGATTTCCATAAAGAAAAGCTGCTTTAGAGTGCTACACTGTAAGAGGGGCTGGGCAAACAAGAAGGGACGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTCAGGACAAACAGAGAGC--CCGAAAACGAGGCAGAGGTGAGCGGGGACCAGCAGCCCAGCGGCACTGACGC--GCCAGG----GACTTGGGCTCTGCTGGCCTCCTCCCTCGCGGCCAGCAGTGGCAGTGGTGGGAGTAGGCCTGGCTTGTCTGT-GGTTGCCTTTGTTGCTTTAATTGAAAGTACTCAAGGCTATTTCTTGTCGCGTCGTTTCTGACAATGTCCGGTGGTCCCTACCCTGTAATGCCAGGAGGTTCCAGCCCCACCCTTCCCTCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 534808 715 + 162613886 TTATTTATGCAGAA-TTTTTTTTTCTCTAGCTGGAAGAGCTGTTTATATGCACGTTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGA-----TTTTTTTTTCCCAAGCCATTC-CTGGGGGATTCCTGGGAGCCATGTGGGAGAGGCGTGAGGAAGTGAGACCTTCACCCCGAGACAGGTCCTGACGCACCCTCTGGTGC-C-TCTACTCAAGTGAGGTGAGAGGGGAAACTG--GTGTATTTTTAGATGAAGTTTCCT-TGGGAAATTGTTTCTATTTTAT-----ATTTTATCAGTAAT--------------CCCCTGGCTAATGTTTTAAACCAATATTTATAACACTGCCTCAGAGCTTTGGAATAAACAGATTTCCATAAAGAAAAGCTGCTTTAGAGTGCTACACTGTAAGAGGGGCTGGGCAAACAAGAAGGGACGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTCAGGACAAACAGAGAGC--CCGAAAACGAGGCAGAGGTGAGCGGGGACCAGCAGCCCAGCGGCACTGACGC--GCCAGG----GACTTGGGCTCTGCTGGCCTCCTCCCTCGCGGCCAGCAGTGGCAGTGGTGGGAGTAGGCCTGGCTTGTCTGT-GGTTGCCTTTGTTGCTTTAATTGAAAGTACTCAAGGCTATTTCTTGTCGCGTCGTTTCTGACAATGTCCGGTGGTCCCTACCCTGTAATGCCAGAAGGTTCCAGCCCCACCCTTCCCTCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 106116 713 - 432965 TTATTTATGCAGAA-TTTTTTTTTCTCTAGCTGGAAGAGCTGTTTATATGCATGTTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGA-----CTTTTTTTTTCCCAGCCATTC-CTGGGGGATTCCTGGGAGCCATGTGGGAGAGGCGTGAGGAAGTGAGGCCTTCACCCCGAGACAGGTCCTGACGCACTCTCTGGTGC-C-TCTACTCACGTGAGGTGAGAGGGGAAACTGGTGTGTATTTTTAGATGAAGTTTCCT-TGGGAAATTGTTTCTATTTTAT-----ATTCTATCAATAAT--------------CCCCTGGCTAATGTTTTAAACCAATATTTATAACACTGCCTCAGAGCTTTGGAATAAACAGATTTCCATAAAGAAAAGCTGCTTTAGAGTGCTACACCGTAAGAGGGGCTTGGCAAACAAGAAGGGACGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTCGGGACAAAC----AGC--CCGAAAACGCGGCAGAGGTGAGCGGGGACCAGCAGCACGGCGGCACTGACGT--GCCAGG----GACTTGGGCTGTGCTGGCCTCCTCCCTCGCGGCCAGCAGTGGCAGTGGTGGGAGTAGGCCTGGCTTGTCTGT-GGTTGCCTTTGTTGCTTTAATTGAAAGTACTCAAGGCCATTTCTTGTCGCGTCGTTTCTGACAGTGTCCGGTGGTCCCTACCCTGTAACGCCAGGAGGTTCCAGCCCCACCCTTCCCTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 166603 712 + 85365473 TTATTTACGCAGAG--TTTTTTTTCTCTAGCTGGAAGAGCTGTTTGTACGCACGTTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGA-----TTTTTTTTTTCCAAGCCATTC-CTGGGGGATTCCTGGGAACCATGGGGGAGAGGCGTGAGGAAGTGA--CCTTCACCCTGAGACAGGTCCTGACGCACCCTCTGGTCC-C-TCTACTCAAGTGAGGTGAGAGGGGAAACTG--GTGTATTTTTAGATGAAGTTTCCT-TGGGAAATAGCTTCTATTTTAT-----ATTTTATCAATAAT--------------CCCCTGGCCAATGTTTTAAACCGATATTTATAACCCTGCCTCAGAGCTTTGGAATAAACAGAGTTCCATAAAGAAAAGCTGTTTTAGAGTGCTGCATTGTAAGAGGGGCTTGGCAAACATGAAGGGATGGAGGAAAGACCACCAAGTGACAGGCACAGGTGTCAGGACAGACAGAGAGC--CCGAAAACGAGGCAGAGGTGAGCGGGGACCAGCAGCACAGCGGCACTGACGC--ACCAGG----GACTCGGGCTCTGCTGGCTTCCTCCCTCGCCGCCAGCAGTGGCAGTGGTGGGAGTAGGCCtggcttgtctgt-ggttgcctttgttgctttaaatgaatgtactcaaggccatttcttgtcacatcgtttctgacagtgtccggtggtccctaccctgtaatgccaagaggttccaaccccacccttcccttc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34012590 693 + 185818997 TTATTTATGCAGAACTCTTTTTTTCTCTACCTGGAAGACCTGTTTATATGCACATTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGA-----TTTTTTTTTTCCAAGCCATTCTCAGGGGGATTCCTGGGAAGCATGTGGAAGAGGCGTGAGGAAGTGA--CCTTCA----------------GGCGCGCCCTCTGGTCC-C-TCTACTCAAGTGAGGT--GAGGGGAAACTG--GTGTATTTTTAGATGAAGTTTCCT-TGGGAAATAGTTTCTGTTTTAT-----ATTTTATCAATAAT--------------CCGTTGGCTAATGTTTTAAACCAATATTTATAAGACTGCCCAAGAGCTTTGGAATAAACAGATTTCCACAATGAAAAGCTGTTTTAAAGTGCTACATTGTAAGAGAGGCTTGGCAAACAAGAAGGGTTGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTTAGGACAAAC----AGC--CGGAAAACGAGGCAGAGGTGAGCAGGGACCAGCAGCACAGGGGCACTGCCAC--ACCAGG----GACTCGGGCTCTGCTGGCCTCCTCCCTCGTGGCCAGCAGTGGCAGTGGTGGGAGTAGGCCTGGCTTGTCTGT-GGTTGCCTTTGTTGCTTTAGATGAATGTACTCTAGGCCATTTCTTGTTGCATCGTTTCTGACAGTGGCCGATGGTCACTACCCTCTAATGCCAGGAGGTTCCAACCCCACCCTTCCCTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33628557 693 + 192294377 TTATTTATGCAGAACTCTTTTTTTCTCTACCTGGAAGACCTGTTTATATGCACATTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGA-----TTTTTTTTTTCCAAGCCATTCTCAGGGGGATTCCTGGGAAGCATGTGGAAGAGGCGTGAGGAAGTGA--CCTTCA----------------GGCGCGCCCTCTGGTCC-C-TCTACTCAAGTGAGGT--GAGGGGAAACTG--GTGTATTTTTAGATGAAGTTTCCT-TGGGAAATAGTTTCTGTTTTAT-----ATTTTATCAATAAT--------------CCGTTGGCTAATGTTTTAAACCAATATTTATAAGACTGCCCAAGAGCTTTGGAATAAACAGATTTCCACAATGAAAAGCTGTTTTAAAGTGCTACATTGTAAGAGAGGCTTGGCAAACAAGAAGGGTTGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTTAGGACAAAC----AGC--CGGAAAACGAGGCAGAGGTGAGCAGGGACCAGCAGCACAGGGGCACTGCCAC--ACCAGG----GACTCGGGCTCTGCTGGCCTCCTCCCTCGTGGCCAGCAGTGGCAGTGGTGGGAGTAGGCCTGGCTTGTCTGT-GGTTGCCTTTGTTGCTTTAGATGAATGTACTCTAGGCCATTTCTTGTTGCATCGTTTCTGACAGTGGCCGATGGTCACTACCCTCTAATGCCAGGAGGTTCCAACCCCACCCTTCCCTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4395776 691 - 9440265 TTATTTATGCAGAA--CTTTTTTTCTCTACCTGGAAGACCTGTTTATATGCACATTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGA-----TTTTTTTTTTTCAAGCCATTCTCAGGGGGATTCCTGGGAAGCATGTGGAAGAGGCGTGAGGAAGTGA--CCTTCA----------------GGCGCGCCCTCTGGTCC-C-TCTACTCAAGTGAGGT--GAGGGGAAACTG--GTGTATTTTTAGATGAAGTTTCCT-TGGGAAATAGTTTCTGTTTTAT-----ATTTTATCAATAAT--------------CCGTTGGCTAATGTTTTAAACCAATATTTATGAGACTGCCCAAGAGCTTTGGAATAAACAGATTTCCACAATGAAAAGCTGTTTTAAAGTGCTACATTGTAAGAGAGGCTTGGCAAACAAGAAGGGTTGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTTAGGACAAAC----AGC--CGGAAAACGAGGCAGAGGTGAGCAGGGACCAGCAGCACAGGGGCACTGCCAC--ACCAGG----GACTCGGGCTCTGCTGGCCTCCTCCCTCGCGGCCAGCAGTGGCAGTGGTGGGAGTAGGCCTGGCTTGTCTGT-GGTTGCCTTTGTTGCTTTAGATGAATGTACTCTAGGCCATTTCTTGTTGCATCGTTTCTGACAGTGGCCGATGGTCACTACCCTCTAATGCCAGGAGGTTCCAACCCCACCCTTCCCTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16983804 691 - 21915920 TTATTTATGCAGAA--CTTTTTTTCTCTACCTGGAAGACCTGTTTATATGCACATTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGA-----TTTTTTTTTTCCAAGTCATTCTCAGGGGGATTCCTGGGAAGCATGTGGAAGAGGCGTGAGGAAGTGA--CCTTCA----------------GGCGTGCCCTCTGGTCC-C-TCTACTCAAGTGAGGT--GAGGGGAAACTG--GTATATTTTTAGATGACGTTTCCT-TGGGAAATAGTTTCTGTTTTAT-----ATTTTATCAATAAT--------------CCCTTGGCTAATGTTTTAAACCAATATTTATAAGACTGCCCAAGAGCTTTGGAATAAACAGATTTCCACAATGAAAAGCTGTTTTAAAGTGCTACATTGTAAGAGAGGCTTGGCAAACAAGAAGGGTTGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTTAGGACAAAC----AGC--CGGAAAACGAGGCAGAGGTGAGCAGGGACCAGCAGCACAGGGGCACTGCCAC--ACCAGG----GACTCGGGCTCTGCTGGCCTCCTCCCTCGCAGCCAGTAGTGGCAGTGGTGGGAGTAGGCCTGGCTTGTCTGT-GGTTGCTTTTGTTGCTTTAGATGAATGTACTCTAGGCCATTTCTTGTTGCATCGTTTCTGACAGTGGCCGATGGTCACTACCCTCTAATGCCAGGAGGTTCCAACCCCACCCTTCCCTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 119366 703 - 21531802 TTATTGATGCAGAA--CTTTTTTCCTCTAGCTGGAAGACCTGTTTATGTGCACGTTTCTTTCGGGGCAACTGTTCTCCATTGTCACAGA-------TTTTTTTTCCAAGCCATTCCCGGGGGGATTCCTGGGAAGCACGTGGAAGAGGCGTGAGGAAGTGA--CCTTCACCCTGAGACAGGTCCTGGCGTGCCCTCTGGTCC-C-TCTACTCAGGGGAGGT--GAGGGGAAACTG--GTGTGTTTTCAGATGAAGTTTTCT-TGAGAAATAGTTTCTATTTTAT-----ATTTTATCAATAAT--------------CCCTTGGCTAATGTTTTAAACCAATATTTATAACACTGCCCAAGAGCTTTGGAATAAACAGATTTCCGCAGAGAAAAGCTGTTTTAAAGTGCTACACGGTAAGAGGGGCTTGGCAAACAAGAAGGGATGGAGGAAAGACCACCAAGTGAGAGGTACAGGTGTCAGCACAAAC----AGC--CCGAAAACG-GGCAGAGGTGAGCGGGGACCAGCAGCACGGGGGCACTGACGC--CCCAGG----GACTCGGGCTCTGCTGGCCTCCTCCCTCGCGG-CAGCAGTGGCAGTGGTGGGAGCAGGCCTGGCTTGTCTGT-GGTTGCCTTTGTTGCTTTAGATGAATGTACTCAAGGCCATTTCTTGTTGCATCGTTTCTGACAGTGGCTGATGGTCACTACCCTATAATGCCAGGAGGTTCCGACCCCACCCTTCCCTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 151999 691 - 2515279 TTATTTATGCAGAA--CTTTTTTTCTCTACCTGGAAGACCTGTTTATATGCACATTTCTTT-GGGGCAACTCTTCTCCATTGTCACAGA----TTTTTTTTTTTCCAAGCCATTCTCAGGGGGATTCCTGGGAAGCATGTGGAAGAGGCGTGAGGAAGTGA--CCTTCA----------------GGCGCGCCCTCTGGTCC-C-TCTACTCAAGTGAGGT--GAGGGGAAACTG--GTGTATTTTTAGATGAAGTTTCCT-TGGGAAATAGTTTCTGTTTTAT-----ATTTTATCAATAAT--------------CCCTTGGCTAATGTTTTAAACCAATATTTATAAAACTGCCCAAGAGCTTTGGAATAAACAGATTTCCACAATGAAAAGCTGTTGTAAAGTGCTACATTGTAAGAGAGGCTTGGCAAACAAGAAGGGTTGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTTAGGACAAAC----AGC--CGGAAAACGAGGCAGAGGTGAGCAGGGACCAGCAGCACAGGGGCACTGCCAC--ACCAGG----GACTCGGGCTCTGCTGGCCGCCTCCCTCGCAGCCAGCAGTGGCAGTGGTGGGAGTAGGCCTGGCTTGTCTGT-GGTTGCCTTTGTTGCTTTAGATGAATGTACTCTAGGCCATTTCTTGTTGCATCGTTTCTGACAGTGGCCGATGGTCACTACCCTCTAATGCCAGGAGGTTCCAACCCCACCCTTCCCTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 309638 712 + 6586416 TTATTTATGCAGAA--CTTTTTTTCTCTACCTGGAAGACCTGTTTATAGGCACGTTTCTTTGGGGGCAACTCTTCTCCATTGTCACAGATTTTTTTTTTTTTTTCCAAGCCATTCCCGGGGGGATTCCTGGGAAGCACGTGGAAGAGGCGTGAGGAAGTGA--CCTTCACCCTGAGACAGGTCCTGGCGCGCCCTCTGGTCC-C-TCTACTCAAGTGAGGT--GAGGGGAAACTG--GCGTGTTTTCAGATGAAGTTTCCT-TGGGAAATAGTTTCTATTTTAT-----ATTTTATCAATAAT--------------CCTTTGGCTAATGTCTTAAACCAATATTTATAAGACTGCCCAAAAGCTTTGGAATAAACAGATTTCCACAGAGAAAAGCTGTTTTAAAGTGTTACATTGTAAGAGGGGCTTGGCAAACAAGAAGGGATGGAGGAAAGACCACCAAGTGAGAGGCACAGGTGTCAGGACAAAC----AGC--CGGAAAACGAGGCAGAGGTGAGCGGGGACCAGCAGCACAGGGGCACTGACAT--GCCAGG----GACTCCGGCTCTGCTGGCCTCCTCCCTCGCGGCCAGCAGTGGCAGTGGTGGGAGTAGGCCTGGCTTGTCTGT-GGTTGCCTTTGTTGCTTTAGATGAATGTACTCTAGGCCATTTCTTGTTGCATCGTTTCTGACAGTGGCCGATGGTCACTACCCTGTAATGCCAGGAGGTTCCAACCCCACCCTTCCCTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 37830 683 + 138751 TTATTTATGCAGAA----TTTTTTCTCTAGCTGGAAGACCTGTTTATATGCACGTTGCTTTGGGTGCAACTCTTCTCCATTGTCAC--------ATTTTTTTTTTCAACCCATTC-CCGGGGGATTCATGGGAACAATGTCAGAGAGGTATGAGGAAGTAG--ACTTCA-CCCAAGACGGGTCCTGGCGCTCCCTCAGCTGC-CTTCCACTCAAGTGAGGAGAGAGGGGAAACTG--GTGTATTTTTAGATGACGTTTCCT-TGGGAAATAGTTTCTATTTTAT-----ATTTTATCAGTAAT--------------CCCCTGGCTGATGTTTTAAACTAATGTTTATAACACTGCCTAAGAGCTTTGGAATAAGTAGATTTCCATAAAGAAAAGCTGTTTTA-AGTGCTATGTTGTAAG-GGGGCTTGGCAAACAAGAAGCATTGGAGGAAATACCACCAAGTGAAAGGCTCAGGTGTCAGGACAGAA----AGCA-CTGAAAATGGGG-AGAGGTCAGCGGG-------AACACAGCGGCACTGACCC--TCCAGG----GACTT-GGCTCTGCTGGCCTCCTCCCTCGTGGTCAGCAGTGGAGGTGGTGGGAGGAGACCCGGCTTGCCTGT-GGTTTTCTTTGTTGCTTTAAACAAATGTACTTAGGACTA----------CATCATTTCTGACAGTGTCCAGTGGTCCCTACCCTGTAATGCCAGGGGGTTCCAACCCCACCCTTCCCTCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 352875 680 - 2409723 TTATTTATGCAGAA---CTTTTTTTTCTAGCTGAAAGACCTGTTTATATGCATGTTTCTTTGGGTACAACTCTTCTCCATTGTCAC--------TTTTTTTTTTTCAACCCTTTC-CCGGGGAATTCATGGGAACGATGTC--AGAGGCATGAGGAAGTGG--CCTTCA-CCCAAGACGGGTCCTGGCGCCCCCTCAGCTGC-CTTCCACTCAAGTGAGGAGAGAGGGGAAACTG--GTGTATTTTCAGATGAAGTTTCCT-CAAGAAATAGTTTCTATTTTAT-----ATTTTATCAATAAT--------------CCCCTGGCTGATGTTTTGAACCAGTATTTATAACACTGCGTAAGAGCTTTGGAATAAGTAGATTTCCATAAAGAAAAGCTGTTTTA-AGTGCTACGTTGTAAGAGGGGCTTGGCAAACAAGAAAGGATGGAGGAGATAACACCAAGTGAGAGGCGCAGGTGTCGGGACAGAG----AGCA-CTGAAAATGGGG-AGAGGT------------------CAGCGGCACTGACC----CCAGG----GACTT-GGCTCTGCTGGCCTCCTCCCTCCAGGTCAGCAGTGGCGGTGGTGGGAGGAGACCCGGCTTGCCTGT-GGTTGCCTTTGTTGCTTTAAATGACTATACTCAGGACTATATCTTGTCCCATCATTTCTGGCAGTGTCTGGTGGTCCCTACCCTGTAATGCCAGGGGGTTCCAGCCCCACCATTCTCTCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 516642 693 - 2125214 TTATTTATGCAGAA---CTTTTTTCTCTAGCTGGAAGACCTGTTTATATGCATGTTT-TTTGGGTGCAACTCTTCTCCATTGTCAC--------A-TTTTTTTTTCAACCCATTC-CCGGGGGATTCGTTGGAATGATGTCAGAGAGGCATGAGGAAGTGG--CCTTCA-CCCAAGACGGGTCCTGGCGCTCCCTCAGCTGC-CTTCCACTCAAGTGAGGAGAGAGGGGAAACTG--GTGTATTTTTAGATGAAGTTTCCT-TGGGAAATAGTTTCTATTTTAT-----ATTTTATCAATAAT--------------CCCCTGGCTGATGTTTTAAACCAATATTTATAACACTGCCTAAGAGCTTTGGAATAAGTGGATTTCCATAAAGAAAAGCTGTTTTA-AGTGCTACGCTGTAAGAGGGGCTTGGCAAACAAGAAGGGATGGAGGAAATACCACCAAGTGAGAGGCGCAGGTGTCGGGACAGAG----AGCA-CTGAAAATGGGG-AGAGGTCAGCAGG-------AGCACAGCGTCACTGACCC--ACCAGG----GACTT-GGCTCTGCTGGCCTCCTCCCTCGAGGTCAGCAGTGGCTGTGGTGGGAGGAGACCCGGCTTGCCTGT-GGTTGCCTTTGTTGCTTTAAACAAATGTACTCAGGACTATATATTGTCCCATCATTTCTGGCAGTGTCCGGTGGTCCCTACCCTGTAATGCCAGGAGGTTCCAACCCCACCCTTCCCTCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2246319 671 - 8137123 TTACTTGTGCAGTC--CCCTCTCCTCCCAGTTGGAAGAAGTTTTC-----CATGTTTCTTTTGGAGAAACTC-CCTCTGTGGTCACAGATTT--TTTTTTTTTTTCAGTCTATTC-TTGGGTAATTTCTAGGAATAATGTAGAGGAGGCATGAGAACATGA--CCTTTACCTTGACACAGGTCCTAAAGTTCCTTCTGACCC-CCACCACTACAGCAAGGAGAAAGTGGAAACTT--AT---TTTTTTAATGATGTTTTTC-TGGGAAATAGTCTCAATTTTAC-----ATTTCATCAATAAT--------------GTCCTAGCTAATGTTTTAAACCAGCATTTGTAACATTGCCTAAGAATTTTGGAAAAAAAGGATTTTGATACAGAAAATCAGTTTTAGATTGTTGCATCATGAGAAGGTCTTAGCAAACAAGAAGGAGTGGAGAGGAAGCCACCATGCTTGAGGAGCAGCTACTGGG-CAGAC----AGA--GCCCCGGCAAGGC--AAGTGAGTGGATGCCAGAATCATGGGGGCACTGAC---------------------------CTGGCCTCCTTCTGGGCT-CCACTAGTAGCAGTGGTGGTAGCAGCAGTAGCTTGTCTATCGGTTTTCTTTGTTGCCTTAAATCGGTGGA------ACCTTTTCTTGTCCCTCTGTTCCTGACA-TGCTGGGTGGTCCCTGCTGTTTGATGCCTGGAGG-TCAAACCCCCCCCCCAACTCC i otoGar3.GL873611 C 0 I 6717 s canFam3.chr6 61039320 587 - 77573801 ------------------------ctctgcatgga--------------gcctgcttcttt------ctccctctccctgtgtctccgc-----tctctctccttctgtct-----ctcatgaataaatagataaaatctaaaaaa------aagaAATGA--TGGTCACCTGGATGCAGGTCTCAGTGTTTCCTCCAATGTGC-TCTCCTACAAT-AGGTGAGAGTGGAAACTG----CTATTTTTAGATGAAATTTCTTGGGGGAAATAGTTTCTGTTTAATCAGTAATCCTCTGGCTAATTTTTTGAGGTGAGGTCTCTGGCTAATTTTTTAATCCAATATTTATAACACTACCTAAGCACTTTGGGATCAATGGATTATAATAGAGAAAAGCGCTTATTGAGTTC-ACATTACAAGTGGGCCTTGGCAAATAAG--GGTACAGAGAAGATGCTAACAAACAAGAGGGGCGGCCCATGGGGCCGAGAGAGAGCATCTGAAAACAAGACAGGAGTGAACACATATCTGCAGCAGGACAGCATCGGTGCCTCCCAGGAAAAGAACTGGGCTGTGCTAGCTGATCCCCACACATCTAGGAGC------------AGTTCATCTGTCCTGTCTGT--------------------------------------------------------CCCTGACA------------------------ACATAAAGAGCCTGGTGCCCTGCCTGGC----- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=2804681.000000 s hg38.chr7_KI270899v1_alt 145373 342 + 190869 ccactccctctttcatctcccggatcctattagaggattgcttttatagctgatgagctgatgaagtatgcatttagccctttaaccg-taactgaatttcccctgGT----GCACATCTGTATGA-AGGGTGTGCACCAGGGCTGAGCCGTCTGCTGGGCGAATATGTCC---------CTCCCTG-AGGCCCAGGACCACAACCCCTGAGTCACT-CAAAGGAATCGTTCCCAGCCTTAAGGTCAGATGCGCTTTCTCCTTGTCCTCCATTATTTCTTT-AAATTCCTGCCACATTTAAGTTTCTTTATATTTAAACTAAGACCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT s panTro5.chr7_NW_015973580v1_random 19631 341 - 83720 CCACTCCCTCTTTCATCTTCCGGATCCTATTAGAGGATTGCTTTTATAGCTGATGAGCTGATGAAGTATGCATTTAGCCCTTTAACCG-TAACTGAATTTCCCCTGGT----GCACGTCTGTATGA-AGGGTGTGCACCAGGGCTGAGCCGTCTGCTGGGCGAATATGTCC---------CTCCCTG-AGGCCCAGGACCACAACCCCTGAGTCACT-CAAAGGAATCGTTCCCAGCCTTAAGGTCAGATGTGCTTTTTCCTTGTCCTCCATTATTTC-TT-AAATTCCTGCCACATTTAAGTTTCTTTATATTTAAACTAAGACCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 535523 342 + 162613886 CCACTCCCTCTTTCATCTTCTGGATCCTATTAGAGGATTGCTTTTATAGCTGATGAGCTGATGAAGTATGCATTTAGCCCTTTAACCG-TAACTGAATTTCCCCTGGT----GCACGTCTGTATGA-AGGGTGTGCACCAGGGCTGAGCCGTCTGCTGGGCGAATATGTCC---------CTCCCTG-AGGCCCAGGACCACAACCCCTGAGTCACT-CAAAGGAATCGTTCCCAGCCTTAAGGTCAGATGTGCTTTTTCCTTGTCCTCCATTATTTCTTT-AAATTCCTGCCACATTTAAGTTTCTTTATATTTAAACTAAGACCTTTTATTTCTTAAACTTCTAATTGCCATTCTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 106829 341 - 432965 CCACTCCCTCTTTCATCTCCCGGATCCTATCAGAGGATTGCTTTTATAGCTGATGAGCT-ATGAAGTATGCATTCAGCCCTTTAACCG-TAACTGAACTTCCCCTGGT----GCACGTCTGTATGA-AGGGTGTTCACCAGGGCTGAGCCGTCCGCTGGGCGAATATGTCC---------CTCCCCA-AGGCCCAGGACCACAACCCCTGAGTCACT-CAAAGGAATCGTTCCCAGCCTTAAGGTCAGATGTGCTTTTTCCTTGTCCTCCGTTATTTCTTT-AAATTCCTGCCACATTTAAGTTTCTTTATATTTAAACTAAGACCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 167315 342 + 85365473 ccactccgtccttcatctcctggagcctatcagaggattacttttatagctgatgagctgatgaagtatgcatttagccctgtaactg-taactgaatttcccCCGGT----GCACGTCTGTATGA-AGGGTGTGCACCAGGGCTGAGCTGTCTGCTGGGTGAATATGTCC---------CTCCCTG-AGGCCCAGGACCACGACCCCTGAGTCACT-CAAAGGAATCGTTCCCAGCCTTAAGGTCAGATGTGCTTTTTCCTCGTCCTCCATTATTTCTTT-AAAATCCTGCCACATTTAAGTTTCTTTATATTTAAACTAAGACCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34013283 335 + 185818997 GCACTCCCTCTTTCATCTCCCAGATCCTATCAGAGGATTACTTTTATAGCTG--------ATGAAGTATGTATTTAGCCCTGTGACCG-TAACTGAATTTCCCCTGGT----GCACGTCTGTGTGA-AGAGTGTGCACCAGGGCTGAGCCATCTGCTGGGAGAATATGTCC---------CTCCCTG-AGGCCCAGGACCATGACCCCTGAGCCACT-CAAAGGAATCATTCCCAGCCTTAAGGTCAGATGTGCTTTTTCCTTGTACTCTATTATTTCTTTAAAAATCCTGCCACATTGAAGTGTATTTGTATTTAAACTAAAATCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33629250 335 + 192294377 GCACTCCCTCTTTCATCTCCCAGATCCTATCAGAGGATTACTTTTATAGCTG--------ATGAAGTATGTATTTAGCCCTGTGACCG-TAACTGAATTTCCCCTGGT----GCACGTCTGTGTGA-AGAGTGTGCACCAGGGCTGAGCCATCTGCTGGGAGAATATGTCC---------CTCCCTG-AGGCCCAGGACCATGACCCCTGAGCCACT-CAAAGGAATCATTCCCAGCCTTAAGGTCAGATGTGCTTTTTCCTTGTACTCTATTATTTCTTTAAAAATCCTGCCACATTGAAGTGTATTTGTATTTAAACTAAAATCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4396467 335 - 9440265 GCACTCCCTCTTTCATCTCCCAGATCCTATCAGAGGATTACTTTTATAGCTG--------ATGAAGTATGTATTTAGCCCTGTGACCG-TAACTGAATTTCCCCTGGT----GCACGTCTGTGTGA-AGAGTGTGCACCAGGGCTGAGCCATCTGCTGGGAGAATATGTCC---------CTCCCTG-AGGCTCAGGACCATGACCCCTGAGCCACT-CAAAGGAATCATTCCCAGCCTTAAGGTCAGATGTGCTTTTTCCTTGTACTCTATTATTTCTTTAAAAATCCTGCCACATTGAAGTGTATTTGTATTTAAACTAAAATCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16984495 335 - 21915920 GCACTCCCTCTTTCATCTCCCAGATCCTATCAGAGGATTACTTTTATAGCTG--------GTGAAGTATGTATTTAGCCCTGTGACCG-TAACTGAATTTCCCCTGGT----GCACGTCTGTGTGA-AGAGTGTGCACCAGGGCTGAGCCATCTGCTGGGAGAATATGTCC---------CTCCCTG-AGGCCCAGGACCATGACCCCTGAGCCACT-CAAAGGAATCATTGCCAGCCTTAAGGTCAGATGTGCTTTTTCCTTGTACTCCATTATTTCTTTAAAAATCCTGCCACATTGAAGTGTATTTGTATTTAAACTAAAATCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 120069 331 - 21531802 ACACTCCCTCTTTCATCTCCCAGATCCTATCAGAGGATTACTTTTATAGCTG--------GTGAAGTATGCATTTAGCTCTGTGACCG-TAACTGAACTTCCCCTGGT----GCACGTCTGTGTGA-AGGGTGTGCACCAGGGCTGAGCCGTCTGCTGGGGGAATATGTCC---------CTCCCTG-AGGCCCAGGACCGTGACCCCTGAGCCACT-CAAAGGAATCGTTCCCAGCCTCAAGGTCAGATGTGCTTTTTCCTTGTACTCCATTGTTTCTTT-AAAATCCTGCCACATTGAAGTTTATTTGTATTTAAACTAAGATCTCTTATTTCTTAAACTTCTAATTGCTA---TTTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 152690 335 - 2515279 GCACTCCCTCTTTCATCTCCCAGATCCTATCAGTGGAGTACTTTTATAGCTG--------ATGAAGTATGTATTTAGCCCTGTGACCG-TAACTGAATTTCCCCTGGT----GCACGTCTGTGTGA-AGAGTGTGCACCAAGGCTGAGCCATCTGCTGGGAGAATATGTCC---------CTCCCTG-AGGCCCAGGACCATGACCCCTGAGCCACT-CAAAGGAATCATTCCCAGCCTTAAGGTCAGATGTGCTTTTTCCTTGTACTCCATTATTTCTTTAAAAATCCTGCCACATTGAAGTGTATTTGTATTTAAACTAAAATCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 310350 329 + 6586416 GCACTCCGTCTTTCATCTGCCAGATCCTATCAGAGGATTACTTTTATAGCTG--------ATGAAGTATGCATTTAGCCCTGTAACCA-TAACTGAATTTCCCCTGGT----GCACGTCTGTGTGA-AGGGTGTGCACCAGGGCTGAGCCGTCTGCTGGG-----ATGTCC---------CTCCCTG-AGGCCCAGGACCATGACCCCTGAGCCACT-CAAAGGAATCATTCCCAGCCATAAGGTCAGATGTGCTTTTTCCTTGTACTCCATTATTTCTTT-AAACTCTTGCCACATTTAAGTTTATTTGTATTTAAACTAAGATCTTTTATTTCTTAAACTTCTAATTGCTGTTCTTTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 38513 311 + 138751 CTACTCCCTCTTTCATCTCCCAGATAATATCAGATGATGGCTTTTATAGCTG--------ATGAAGTATGCGTTTAGCCCTGTAACCA-TAGCTGAGTTTCCCCTGGT----GCACATCTGTATGA-AT---------------------GTCTGCTAGGAG-ATACGTCC---------CTCCCTA-AGGCCCTGGACCACCACTCCTGAGCCACT-CGAAGGAATCATCCCCAGCCTTAAGGTCAGATATGCTTTTTCCTTGTACTCCATTATTTCTTT-AAAGTCCT-CCACATTTAAGTTTCTTTATATTTAAACTAAGACCTTTTATTTATTAAACTTCTAAATGCTGTTCTTTT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 353555 333 - 2409723 CCACTCCCTCTTTCATCTCCCAGATACTCTCAGATGATGACTTTTATAGCTG--------ATGAAGTGTACGTTTAGCCCTGTAACCATTAACTGAGTTTCCCCTGCT----GCACATCCGTATGA-ATGGTGTGCACCAGAGCTGAGCAGTCTGCTAGGAG-GTACATCC---------CTCCCTA-AGGCCCAGGACGACAACCCCTGAGCCACT-CGAAGGAATCATTCCCAGCCTTAAGATCAGATGTGCTTTTTCCTTGTACTCCATTATTTCTTT-AAAGTCCT-CCACATTTAAGTTTCTTTATATTTAAACTAAGACCTTTTATTTATTAAACTTCTAAATGCTGTTCTTTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 517335 330 - 2125214 CCACTCTCTCTTTCGTCTCCCAGATATTATCAGATGATGACTTTTATAGCTG--------ATGAAGTGTGCTTTTAGCCCTGTAACCA-TAA-TGAGTTTCCCCTG-T----GCACATCGGTATGA-ATGGTGTGCACCAGAGCTGAGCGGTCTGCTAGGAG-GTACGTCC---------CTCCCTA-AGGCCCAGGACGATGACCCCTGAGCCACT-TGAAGGAATTGTTCCCAGCCTTAAGGTCAGATATGCCTTTTCCTTGTATTCCATTATTTCTTT-CAAGTCCT-CCACATTTAAGTTTCTTTATATTTAAACTAAGACCTTTTATTTATTAAACTTCTAAATGCTGTTCTTTT i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61039907 312 - 77573801 CCTCTGCCTCT--------CCAGCTCCTTTCAGGTGGTTATTTTTCTATT----------GCGA-----------AGCTGAGTACCCA-TAATGAAGTCTCTCTTAGTCTTGGGGGGTCTGTGAGGCAATGTGT---TTAGGG-----------ACCAGGAGAGCAGGCCCCCACCCCATCCCCCTGCAGGCCCAGGAGCAGGA-GCCTGAGCCAGTGGGAAGGAAACATTGCCAGCACTAAGGCCAAATAC-CTTTTCTGTAGGAGTCATTTTTTTCTTT-AAAATCACACCACATCTAAATTTCTTTACATTTACACTAATAACT-TTATCTCTCAAAATTATAATTGCTATTCTTTT i canFam3.chr6 C 0 I 14 e otoGar3.GL873611 2246990 6717 - 8137123 I e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=1426205.000000 s hg38.chr7_KI270899v1_alt 145715 177 + 190869 ATTATTTTTGATAGAAGTTT----GGCTGCTGTAACTgactgggaagctta-aaataacagacaatcatctctcacatttatggggactgggaagtccaagaccaagttgccatctggggagggcctgttccTCACAGCGCCTTCCAGctcaggcctcgtttataagggcactcaagccttc s panTro5.chr7_NW_015973580v1_random 19972 177 - 83720 ATTATTTTTGATAGAAGTTT----GGCTGCTGTAACTgactgggaagctta-aaataacagacaatcatctctcacatttatggggactgggaagtccaagaccaagttgccatctggggagggcctgttccTCACAGCGCCTTCCAGctcaggcctcgtttataagggcactcatcccttc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 535865 175 + 162613886 ATTATTTTTGATAGAAGTTT----GGCTGCTGTAACTgactgggaagctta-aaataacagacaatca--tctcacatttatggggactgggaagtccaagaccaagttgccatctggggagggcctgttccTCACAGCGCCTTCCAGctcaggcctcgtttataagggcactcatcccttc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 107170 177 - 432965 ATTATTTCTGATAGAAGTTT----GGCGGCTGTAACTgaccgggaagctta-aaataacagacaatcatctctcacatttatggggactgggaagtccaagaccaagttgccatctggggagggcctgttccTCACAGCGCCTTCCAGctcaggcctcgtttataagggcactcatcccttc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 167657 176 + 85365473 ATTATTTTTGATAGAAGTTT----GGCTGCTGTAactgactggg-agctta-aaataacagacagtcatctctcacatttatggggaccgggaagtccaagaccaagttgccacctggggagggcccgttcctcacagcgccttccagctcgggcctcatttataagggcactcttcccatc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34013618 181 + 185818997 ATTCTTTTTGGTAGAagtttgtctggctgctgtaactgactgggaagctta-aaataacagacattcatctgtcacatttctggggactgggaagtccaagaccaaggtgccatctggggagggcccatGCCTCACAGTGCCCTCCAGctcaggccccatttataagggcactcatcccatc i rheMac8.chr3 C 0 I 10 s macFas5.chr3 33629585 177 + 192294377 ATTCTTTTTGGTAGAagtttgtctggctgctgtaactgactgggaagctta-aaataacagacattcatctgtcacatttctggggactgggaagtccaagaccaaggtgccatctggggagggcccatGCCTCACAGTGCCCTCCAGctcaggccccatttataagggcactcatcc---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4396802 181 - 9440265 ATTCTTTTTGGTAGAagtttgtctggctgctgtaactgactgggaagctta-aaataacagacattcatctgtcacatttctggggactgggaagtccaagaccaaggtgccatctggggagggcccatGCCTCACAGTGCCCTCCAGctcgggccccatttataagggcactcatcccatc i macNem1.NW_012019910v1 C 0 I 10 s cerAty1.NW_012002954v1 16984830 181 - 21915920 ATTCTTTTTGGTAGAagtttgtctggctgctgtaactgactgggaagctta-aaataacagacatttatctgtcacatttctggggactgggaagtccaagaccaaggtgccatctggggagggcccatGCCTCACAGTGCCCTCCAGctcgggccccatttataagggcactcatcccatc i cerAty1.NW_012002954v1 C 0 I 10 s chlSab2.chr28 120400 181 - 21531802 ATTCTTTTTGGTAGAagtttgtctggctgctgtaactgactggggagctta-aaataacagacattcatctctcacatttctggggactgggaagtccaagaccaaggcgccatctggggagggcccatGCCTCACAGCGCCCTCCAGCTTGGgccccatttataagggcgctcatcccatc i chlSab2.chr28 C 0 I 7 s manLeu1.NW_012101810v1 153025 181 - 2515279 ATTCTTTTTGGTAGAagtttgtctggctgctgtaactgactgggaagctta-aaataacagacattcatctgtcacatttctggggactgggaagtccaagaccaaggtgccatctggggagggcccatGCCTCACAGTGCCCTCCAGctcgggccccatttataagggcactcatcccatc i manLeu1.NW_012101810v1 C 0 I 10 s colAng1.NW_012117710v1 310679 179 + 6586416 ATTCTTTTTGGTAGAAGTTTGTCAG--TTTTGTAACTgactgggaagctta-aaataacagacattcatctctcacatgtctggtgactgggaagtccaggaccaaggtgccatctggggagggcccatGCCTCACAGCGCCCTCCAGctcgggccgcatttataagggcactcatcccatc i colAng1.NW_012117710v1 C 0 I 7 s calJac3.chrUn_GL286444 38824 180 + 138751 ATTCTTTTTGATAGAagtttgtctggctgctgtcaccgactgggaagcttataaataac--acattcatctctcacacttctggggcattggaagtccaagatcaaggtgccatctggggagggcccattgctcccagtgcctcctagctcatgccttatttataagggcactcatcccatc i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 353888 180 - 2409723 ATTCTTTTTCATAGAagtttgtctggctgctgtaaccgactgggaagcttataaataac--atattcatctctcatgcttctggggctttggaagtccaagatcaaggtgccatctggggaaggcccattgctcccagtaccttctagctcatgccttatttataagggcattcatcccatc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 517665 180 - 2125214 ATTCTTTTTAATAGAagtttgtctggctgctgtaaccgactgggaagcttataaataac--acattcatctctcacacttctgggacattggaagtccaagatcaaggtgccatctggggagggcccattgctcccagcgccttctagctcatgccttatttataagggcactcatcccatc i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=53201.000000 s hg38.chr7_KI270899v1_alt 145892 19 + 190869 cacgacaacgggtcctcat s panTro5.chr7_NW_015973580v1_random 20149 19 - 83720 cacgacaacgggtcctcat i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 536040 19 + 162613886 cacgacaacgggtcctcat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 107347 19 - 432965 cacgacaatgggtcctcat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 167833 19 + 85365473 cacgacgatgggtcctcat i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33629762 14 + 192294377 --catcgtgaggaccc--- i macFas5.chr3 C 0 C 0 s chlSab2.chr28 120588 19 - 21531802 cacgacgatgggtcctcag i chlSab2.chr28 I 7 C 0 s colAng1.NW_012117710v1 310865 19 + 6586416 cccgatgatgggtcctcag i colAng1.NW_012117710v1 I 7 C 0 s calJac3.chrUn_GL286444 39004 19 + 138751 cacaacaatatgtcctcat i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 354068 19 - 2409723 cacgacattatgtcctcgt i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 517845 19 - 2125214 cacgataatgtgtcctcat i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e manLeu1.NW_012101810v1 153206 10 - 2515279 I e cerAty1.NW_012002954v1 16985011 10 - 21915920 I e macNem1.NW_012019910v1 4396983 10 - 9440265 I e rheMac8.chr3 34013799 10 + 185818997 I e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=196261.000000 s hg38.chr7_KI270899v1_alt 145911 24 + 190869 gacttactcacctcggaaag-cccc s panTro5.chr7_NW_015973580v1_random 20168 25 - 83720 gacttactcacctcggaaagccccc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 536059 25 + 162613886 gacttactcacctcggaaagccccc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 107366 25 - 432965 gacttactcacctcggaaagccccc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 167852 25 + 85365473 gacttactcacctcggaaagccccc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34013809 25 + 185818997 gacttactcacctcggaaagccccc i rheMac8.chr3 I 10 C 0 s macFas5.chr3 33629776 25 + 192294377 gacttactcacctcggaaagccccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4396993 25 - 9440265 gacttactcacctcggaaagccccc i macNem1.NW_012019910v1 I 10 C 0 s cerAty1.NW_012002954v1 16985021 25 - 21915920 gacttactcacctcggaaagccccc i cerAty1.NW_012002954v1 I 10 C 0 s chlSab2.chr28 120607 25 - 21531802 gacttacgcacctcggaaagccccc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 153216 25 - 2515279 gacttactcacctcggaaagccccc i manLeu1.NW_012101810v1 I 10 C 0 s colAng1.NW_012117710v1 310884 25 + 6586416 gacttactcacctcggaaagccccc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 39023 23 + 138751 gacttattcacct-ggaaatcccc- i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 354087 23 - 2409723 gacttattcacct-ggaaagcccc- i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 517864 23 - 2125214 gacttattcacct-ggaaagcccc- i cebCap1.NW_016107703v1 C 0 I 455 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=186644.000000 s hg38.chr7_KI270899v1_alt 145935 27 + 190869 accccc-aagaccatcacattgtgggtG s panTro5.chr7_NW_015973580v1_random 20193 27 - 83720 accccc-aagaccatcacattgtgggtg i panTro5.chr7_NW_015973580v1_random C 0 I 43 s panPan2.chr7 536084 27 + 162613886 accccc-aagaccatcacattgtgggtg i panPan2.chr7 C 0 I 43 s gorGor5.CYUI01015914v1 107391 27 - 432965 accccc-aagaccatcacattgtgggtg i gorGor5.CYUI01015914v1 C 0 I 43 s nomLeu3.chr20 167877 28 + 85365473 accccctaagaccatcaccttgtgggtg i nomLeu3.chr20 C 0 I 43 s rheMac8.chr3 34013834 28 + 185818997 accccttaagaccatcaccttgtgggtg i rheMac8.chr3 C 0 I 43 s macFas5.chr3 33629801 28 + 192294377 accccttaagaccatcaccttgtgggtg i macFas5.chr3 C 0 I 43 s macNem1.NW_012019910v1 4397018 28 - 9440265 accccttaagaccatcaccttgtgggtg i macNem1.NW_012019910v1 C 0 I 43 s cerAty1.NW_012002954v1 16985046 28 - 21915920 accccttaagaccatcaccttgtgggtg i cerAty1.NW_012002954v1 C 0 I 43 s chlSab2.chr28 120632 28 - 21531802 accccctacgaccatcaccttgtgggtg i chlSab2.chr28 C 0 I 43 s manLeu1.NW_012101810v1 153241 28 - 2515279 actccttaagaccatcaccttgtgggtg i manLeu1.NW_012101810v1 C 0 I 43 s colAng1.NW_012117710v1 310909 28 + 6586416 accccctaagaccatcaccttgtgggtg i colAng1.NW_012117710v1 C 0 I 43 s calJac3.chrUn_GL286444 39047 27 + 138751 a-cccctaagactatcaccttgggggtg i calJac3.chrUn_GL286444 I 1 I 354 s saiBol1.JH378296 354111 28 - 2409723 accccctaagactatcaccttgagggag i saiBol1.JH378296 I 1 I 357 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e aotNan1.NW_018514293v1 106776 66 + 376347 I e cebCap1.NW_016107703v1 517887 455 - 2125214 I a score=9304.000000 s hg38.chr7_KI270899v1_alt 145962 2 + 190869 AT s panTro5.chr7_NW_015973580v1_random 20263 2 - 83720 at i panTro5.chr7_NW_015973580v1_random I 43 C 0 s panPan2.chr7 536154 2 + 162613886 at i panPan2.chr7 I 43 C 0 s gorGor5.CYUI01015914v1 107461 2 - 432965 at i gorGor5.CYUI01015914v1 I 43 C 0 s nomLeu3.chr20 167948 2 + 85365473 at i nomLeu3.chr20 I 43 C 0 s rheMac8.chr3 34013905 2 + 185818997 gt i rheMac8.chr3 I 43 C 0 s macFas5.chr3 33629872 2 + 192294377 gt i macFas5.chr3 I 43 C 0 s macNem1.NW_012019910v1 4397089 2 - 9440265 gt i macNem1.NW_012019910v1 I 43 C 0 s cerAty1.NW_012002954v1 16985117 2 - 21915920 gt i cerAty1.NW_012002954v1 I 43 C 0 s chlSab2.chr28 120703 2 - 21531802 gt i chlSab2.chr28 I 43 C 0 s manLeu1.NW_012101810v1 153312 2 - 2515279 gt i manLeu1.NW_012101810v1 I 43 C 0 s colAng1.NW_012117710v1 310980 2 + 6586416 gt i colAng1.NW_012117710v1 I 43 C 0 s calJac3.chrUn_GL286444 39428 2 + 138751 ac i calJac3.chrUn_GL286444 I 354 C 0 s saiBol1.JH378296 354496 2 - 2409723 ac i saiBol1.JH378296 I 357 C 0 s cebCap1.NW_016107703v1 518342 2 - 2125214 at i cebCap1.NW_016107703v1 I 455 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e aotNan1.NW_018514293v1 106776 66 + 376347 I a score=1160155.000000 s hg38.chr7_KI270899v1_alt 145964 121 + 190869 GGCAGAGCATAAGGTGCCTT-CCCCACATGCTCGGGTTGGCCCAGCGTCTCACGCTAGCAGCTACGTGGAATAGTTA-TTTTTTCTGGAGAAC----TCTGGGACCCCTCTGATGTCTTGGAGCACC s panTro5.chr7_NW_015973580v1_random 20265 121 - 83720 ggcaGAGCATAAGGTGCCTT-CCCCACGTGCTCGGGTTGACCCAACGTCTCACGCTAGCAGCTACGTGGAATAGTTA-TTTTTTCTGGAGAAC----TCGGGGACCCCTCTGATGTCTTGGAGCACC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 536156 121 + 162613886 ggcaGAGCATAAGGTGCCTT-CCCCACGTGCTCGGGTTGACCCAACGTCTCACGCTAGCAGCTACGTGGAATAGTTA-TTTTTTCTGGAGAAC----TCGGGGACCCCTCTGATGTCTTGGAGCACC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 107463 121 - 432965 ggcaGAGCATAAGGTGCCTT-CCCCACGTGCTCGGGTTGACCCAGCGTCTCACGCTAGCAGCTACGTGGAATAGTTA-TTTTTTCTGGAGAAC----TCTGGGACCCCTCTGATGTCTTGGAGCACC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 167950 122 + 85365473 ggcaGAGTATAAGGTGGCTTCCCCCACGTGCTCGGGTTGACCCAGCGTCTCACGCTAGCAGCTACGTGGAATAGTTA-TTTTTTCTGGAGAAC----TCTGGGACCCCTCTGATGTCTTGGAGCACC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34013907 127 + 185818997 ggcaAAGCATGAGGTGCCGTCCCCCATGCGCTCGGGCTGATCCGGCGTCTCACGCTAGCAGCTACGTGGAATTGTTATTTTTTTCTGGAGAACTCTGTCTGGGACCCCTCTGATGTCTTGGAGCACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33629874 127 + 192294377 ggcaAAGCATGAGGTGCCGTCCCCCATGCGCTCGGGCTGATCCGGCGTCTCACGCTAGCAGCTACGTGGAATTGTTATTTTTTTCTGGAGAACTCTGTCTGGGACCCCTCTGATGTCTTGGAGCACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4397091 127 - 9440265 ggcaAAGCATGAGGTGCCGTCCCCCATGCGCTCGGGCTGATCCGGCGTCTCACGCTAGCAGCTACGTGGAATTGTTATTTTTTTCTGGAGAACTCTGTCTGGGACCCCTCTGATGTCTTGGAGCACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16985119 127 - 21915920 ggcaAAGCATGAGGTGCTGTCCCCCACGTGCTCGGGCTGATCCGGCGTCTCACGCTAGCAGCTACGTGGAATTGTTATTTTTTTATGGAGAACTCTGTCTGGGACCCCTCTGATGTCTTGGAGCACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 120705 126 - 21531802 ggcaAAGCACGAGGTGCCGTCCCCCACGCACTCGGGCTGATCCGGCGTCTCACGCTAGCAGCTACGTGGAATTGTTA-TTTTTTCTGGAGAGCTCTGTCTGGGACCCCTCTGATGTCTTGGAGCACC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 153314 127 - 2515279 ggcaAAGCATGAGGTGCCGTCCCCCACGCGCTCGGGCTGATCCGGCGTCTCACACTAGCAGCTACGTGGAATTGTTATTTTTTTCTGGAGAACTCTGTCTGGGACCCCTCTGATGTCTTGGAGCACC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 310982 127 + 6586416 ggcaAAGCATGAGGTGCCTTCCCCCACACGCTCGGGCTGATCCGGCGTCTCACGCTAGCAGCTACGTGGAATTGTTATTTTTTTCTGGAGAACTCTGTCTGGGACCCCTCTGATGTCTTGGAGCACC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 39430 126 + 138751 ggcaAAGCATAAGGTGCCTTCCCCTACATGCTCAGGTTGATCCAGTGTCTCACAGTAGCAGCCATGTATAATTGTTA-TTTTTTCTGGAGAACTCCATCTGGGACCCCTCTGATGTCCTGGAGCACC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 354498 127 - 2409723 ggcaAAGCATGAGGTGCCTTCCCCCACATGCTCAGGTCGATCCAGTGTGTCACGATAGCAGCCATGTGGAATTGTTATTTTTTTCTGGAGAACTCCATCTGGGACCCCTCTGATGTCCTGGAACACC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 518344 126 - 2125214 ggcaAAGCATGAGGTGCCCTCCCCCACGTGCTTGGGTTGATCCAGTGTGTCACGATAGCAGCCATGTGGAATTGTTA-TTTTTTCTGGAGAACTCCATCTGGGACCCCTCTAATGTCCTGGAGCACC i cebCap1.NW_016107703v1 C 0 I 30 s aotNan1.NW_018514293v1 106842 126 + 376347 ggcaAAGCATAAGGTGCTTTCCCCCACATGCTCGGGTTGATCCAGTGTGTCACGATAGCAGCCATGTGGAATTGTTA-TTTTTTCTAGAGAACTCCATCTGGGACCCCTCTGATGTCCTGGAGCACC i aotNan1.NW_018514293v1 I 66 I 30 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I a score=149203.000000 s hg38.chr7_KI270899v1_alt 146085 80 + 190869 CACACAGGCCGTTCACTGTGCACGCTGTGAGGCTGTCGTCTTGGAGCACCCACACAGGCCGTTCACTGTGCACGTGGTGA s panTro5.chr7_NW_015973580v1_random 20386 30 - 83720 CACACAGGCCGTTCACTGTGCACGC--------------------------------------------------GGTGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 536277 30 + 162613886 CACACAGGCCGTTCACTGTGCACGC--------------------------------------------------GGTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 107584 30 - 432965 CACACAGGCCGTTCACTGTGCACAC--------------------------------------------------GGTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 168072 30 + 85365473 TGCACAGGCCATTCACTCTGCATGC--------------------------------------------------TGTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34014034 30 + 185818997 TGAACGGGCCGTTCACTGTGCGCGC--------------------------------------------------CGTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33630001 30 + 192294377 TGAACGGGCCGTTCACTGTGCGCGC--------------------------------------------------CGTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4397218 30 - 9440265 TGAACGGGCTGTTCACTGTGCGCGC--------------------------------------------------CGTGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16985246 30 - 21915920 TGAACGGGCCGTTCACTGTGCGCGC--------------------------------------------------CGTGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 120831 30 - 21531802 TGAACGGGCCGTTCACTGTGCGCGC--------------------------------------------------CGTGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 153441 30 - 2515279 TGAACGGGCCGTTCACTGTGGGCGC--------------------------------------------------CGTGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 311109 30 + 6586416 TGAACGGGCCGTTCACTGTGCGCGC--------------------------------------------------TGTGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 39556 30 + 138751 TGGGTGGGGCATTCACTGTGTGTAC--------------------------------------------------CATGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 354625 30 - 2409723 TGGGTGGGCCTGTCACTGTGTGCAC--------------------------------------------------CACAT i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e aotNan1.NW_018514293v1 106968 30 + 376347 I e cebCap1.NW_016107703v1 518470 30 - 2125214 I a score=17742438.000000 s hg38.chr7_KI270899v1_alt 146165 1956 + 190869 GGCTGTCCTCTGGGGAGTTCTGCTG-TTGTATGGGTTCTGTCTGTgtcaatgtcccagcgggaacgcagggcacactagcgtcatccccagagggcttggtaaggggactgtttgcagagacataggcagagggctggaaaactacc-aaaaaagtgcagtgttctggacctaataatagcagagctattctcaccctggtctgaaggcaggaggggaggagcagttaatggattctggaagtcaggttgcacagagtcaccttgaaagatgccatgaccttcaccgagggccagacagagactaagatgaccccataggagaataagacctagacctcat-------cctcctg-cctcctgccagtccctgcc-aggggtcgccaatggcaaaacaggactggaagccagaggccatggaagcccatggatgaagtccacaggccagcctccccgagagcagcctggaCGGTCCGCAGGAGACGTCTCCTGTCTTAGGCGTCCCACGCCGCGTGCTCCTGTTCAGCCCTGCCGAGGTGGAAGCTTGGAGTGGCTCACGGTGGATGCATTGACGCTGCAGACGCCAGCAAGTGCTACAAACCAGAGCTGGCCTTTAACTCAGA-Ctgatggagaaggtgttaataatgcagattagacttaaaagtgttgaagccattgcactgtgaacagcaaaaaaat---tgaagaactcttctggcatttaaaaacaattactcagttcagcagagaagtcactgacaaacgaga--tcacactgactgctttgtcgttttggttttgtcttactcattaatgcaaataagaacattcactagcatctgtgtcgggcctaccctccctggtcaaatacagctacagtctccctgcagaaacgagttttccagaaatgagccgatgttttctgcgagaa--------tcaattggtcatatacaatttacaaaaatgagtactgtatactatatttgtaaactgtacactgcagatgctttatttcactgaaatttataatacacttatcc--atgtatatgcatgcatgcatttttgttcctgagatccagctgtgaaatgtttaccagcacaTAAATTACCAGCACATGCTCTTTTTTGTTAACCTACTAGGT-AAAATCTTCATTTATTACATCAAATTCTTGTAGTTTTTGTATTGCAATTATGCAGATATTGATTATCGCAGTATTACTGCAATTATACAGAT--------------ACCACAATTTCAGATATTGATCAGCGTGTTCAGTTGGTTTCTAAGGAGGTTTACTTACCTCATGGTACACCTAGTTTGCATAGTTTGATTATATTTAACTCTTATGCTAATTGGGGGAAGTCATTGATTTATTGGACAGATGCACCTGTGGTCTTCCCTGAGCACATCCTGGCCAAGGATGCTGCCCCCAGGAGATTTGAGAAGTCCTGTAAGGATCATATCAGTATTTTCAAATACTTATAGAAAAGCCAGAGGGATTGACCCAGAATTACCAATATAAGCTTGACCCTGAGATAACAAT-----------------------------------------------------------------------------------------GCCATTTTATGTTTGCATGCATAAAACCAATGCAAGAGGCTGATGACTCCAGATCCCTTATATAAGCCAATAAAAAGTAGTTTCATTTTTTATTTCATTTAAAAAAGTGTACCATTAACCTAAAGCCTGCTTGTAAAACCAGTTTGTTTCTGAAGCATTAGCTCAAAGCTCACTTGCATTTGGTGAGAAGTCCCTCACGTGTGGCTGCCCTGGCTGGGAGCTCTGAGCTCTGGGAGCCATTGGAACTGCTAATCCCACCAGTGCCGTCTGATTCCCTCTGCTCTAATGGAGGTCTTTTGCC-GGGTATCCAGTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGAAAATGCCTTTCTTTGTGATATGAAGCTGTCAGTGATGGAGACTGACCTTTTCATAAGTCAGTGAATTTTCTT s panTro5.chr7_NW_015973580v1_random 20416 2008 - 83720 GGCTGTCCTCTGGGGAGTTCTGCTG-TTGTATGGGTTCTGTCTGTGTCAATGTCCCAGCGGGAACGCAGGGCACACTAGCGTCATCCCCAGAGGGCTTGGTAAGGGGACTGTTTGCAGAGACATAGGCAGAGCGCTGGAAAACTACC-AAAAAAGTGCAGTGTTCTGGACCTAATAATAGCACAGCTATTCTCACCCTGGTCTGAAGGCAGGAGGGGAGGAGCAGTTAATGGATTCTGGAAGTCGGGTTGCACAGAGTCACCTTGAAAGATGCCATGACCTTCACCGAGGGCCAGACAGAGACTAAGATGACCCCATAggagaataagacctagacctcatcctcctgcctcctg-cctcctgccagtccctgcc-aggggtcgccaatggcaaaacaggactggaagccagaggccttggaagcccatggatgaagtccacaggccagcctccccgagagcagcctggaCGGTCCGCAGGAGACATCTCCTGTCTTAGGCGTCCCACGCCGCGTGCTCCTgttcagccctgccgaggtggaagcttggagtgggtcacggtggatgcattgacgctgcagacgtcagcaagtgctacaaaccagagctggcctttaactcaga-ctgatggagaaggtgttaataatgcagattagacttaaaagtgttgaagccattgcactgtgaacagcaaaaaaat---tgaagaactcttctggcatttaaaaacaattactcagttcagcagagaagtcactgacaaacgaga--tcacactgactgctttgtcgttttggttttgtcttactcattaatgcaaataagaacattcactagcatctgtgttgggcctaccctccctggtcaaacacagctacagtctccctgcagatacgagttttccagaaatgagccgatgttttctgcgagaa--------tcagttggtcatatacaatttacaaaaatgagtaccgtatactatatttgtgaactgtacgctgcagatgccttatttcactgaaatttataatacacttatcc--atgtatatgcatgcatgcagttttgttcctgagatccagctgtgaaatgtttaccagcacaTAAATTACCAGCACATGCTCTTTTTTGTTAACCTACTAGGT-AAAATCTTCATTTATTACATCAAATTCTTGTAGTTTTTGTATTGCAATTATGCAGATATTGATTATCGCAGTATTACTGCAATTATACAGAT--------------ACCACAATTTCAGATATTGATCAGCGTGTTCAGTTGGTTTCTAAGGAGGTTTACTTACCTCATGGTACACCTAGTTTGCATAGTTTGATTATATTTAACTCTTATGCTAATTGGGGGAAGTCATTGATTTATTCGACAGATGCGCCTGTGGTCTTCCCTGAGCACATCCTGGCCAAGGACGCTGCCCCCAGGAGATTTGAGAAGTCCTGTAAGGATCATGTCAGTATTTTCAAATACTTATAGAAAAGCCAGAGGGATTGACCCAGAATTACCAATATAAGCTTGACCCTGAGATAACAATGCCATTTTATGTTTGCATG--------------------------------------------CATAAAACCAGTGCAAGAGGTTGATGGCCATTTTATGTTTGCATGCATAAAACCAATGCAAGAGGCTGATGACTCCAGATCCCTTATATAAGCCAATAAAAAGTAGTTTCATTTTTTATTTCATTTAAAAAAGTGTACCATTAACCTAAAGCCTGCTTGTAAAACCAGTTTGTTTCTGAAGCATTAGCTCAAAGCTCACCTGCATTTGGTGAGAAGTCCCTCACGCGTGGCTGCCCTGGCTGGGAGCTCTGAGCTCTGGGAGCCATTGGAACTGCTAATCCCACCAGTGCCGTCTGATTCCCTCTGCTCTAATGGAGGTCTTTTGCC-GGGTATCAAGTGGCGTTTTCTGGGCTTGGGAGCCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGAAAATGCCTTTCTTTGTGATATGAAGCTGTCAGTGATGGAGACTGACCTTTTCATAAGTCAGTGAATTTTCTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 536307 1948 + 162613886 GGCTGTCCTCTGGGGAGTTCTGCTG-TTGTATGGGTTCTGTCTGTgtcaatgtcccagcgggaacgcagggcacactagcgtcatccccagagggcttggtaaggggactgtttgcagagacataggcagagcgctggaaaactacc-aaaaaagtgcagtgttctggacctaataatagcagagctattctcaccctggtctgaaggcaggaggggaggagcagttaatggattctggaagtcgggttgcacagagtcaccttgaaagatgccatgaccttcaccgagggccagacagagactaagatgaccccataggagaataagacctagacctcat-------cctcctg-cctcctgccagtccctgcc-aggggtcgccaatggcaaaacaggactggaagccagaggccttggaagcccatggatgaagtccacaggccagcctccccgagagcagcctggaCGGTCCGCAGGAGACGTCTCCTGTCTTAGGCGTCCCACGCCGCGTGCTCCTGTTCAGCCCTGCCGAGGTGGAAGCTTGGAGTGGGTCACGGTGGATGCATTGACGCTGCAGACGTCAGCAAGTGCTACAAACCAGAGCTGGCCTTTAACTCAGA-Ctgatggagaaggtgttaataatgcagattagacttaaaagtgttgaagccattgcactgtgaacagcaaaaaaat---tgaagaactcttctggcatttaaaaacaattactcagttcagcagagaagtcactgacgaacgaga--tcacactgactgctttgtcgttttggttttgtcttactcattaatgcaaataagaacattcactagcatctgtgtcgggcctaccctccctggtcaaacacagctacagtctccctgcagatacgagttttccagaaatgagccgatgttttctgcgagaa--------tcagttggtcatatgcaatttacaaaaatgagtaccgtatactgtatttgtgaactgtacgctgcagatgcctcatttcactgaaatttataatacgcttatcc--atgtat--------atgcagttttgttcctgagacccagctgtgaaatgtttaccagcacaTAAATTACCAGCACATGCTCTTTTTTGTTAACCTACTAGGT-AAAATCTTCATTTATTACATCAAATTCTTGTCGTTTCTGTATTGCAATTATGCAGATATTGATTATCGCAGTATTACTGCAATTATACAGAT--------------ACCACAATTTCAGATATTGATCAGCGTGTTCAGTTGGTTTCTAAGGAGGTTTACTTACCTCATGGTACACCTAGTTTGCATAGTTTGATTATATTTAACTTTTACGCTAATTGGGGGAAGTCATTGATTTATCCGACAGATGCGCCTGTGGTCTTCCCTGAGCACATCCTGGCCAAGGACGCTGCCCCCAGGAGATTTGAGAAGTCCTGTAAGGATCATGTCAGTATTTTCAAATACTTATAGAAAAGCCAGAGGGATTGACCCAGAATTACCAATATAAGCTTGACCCTGAGATAACAAT-----------------------------------------------------------------------------------------GCCATTTTATGTTTGCATGCATACAACCAGTGCAAGAGGCTGATGACTCCAGATCCCTTATATAAGCCAATAAAAAGTAGTTTCATTTTTTATTTCATTTAAAAAAGTGTACCATTAACCTAAAGCCTGCTTGTAAAACCAGTTTGTTTCTGAAGCATTAGCTCAAAGCTCACCTGCATTTGGTGAGAAGTCCCTCACGCGTGGCTGCCCTGGCTGGGAGCTCTGAGCTCCGGGAGCCATTGGAACTGCTAATCCCACCAGTGCCGTCTGATTCCCTCTGCTCTAATGGAGGTCTTTTGCC-GGGTATCAAGTGGCGTTTTCTGGGCTTGGGAGCCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGAAAATGCCTTTCTTTGTGATATGAAGCTGTCAGTGATGGAGACTGACCTTTTCATAAGTCAGTGAATTTTCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 107614 2045 - 432965 GGCTGTCCTCTGGGGAGTTCTGCTG-TTGTGTGGGTTCTGTCTGTgtcagtgtcccagcgggaacgcagggcacactagcgtcatccccagagggcttggtaaggggactgtttgcagagacataggcagagtgctggaaaactacc-aaaaaagtgcagtgttctgggcctaataatagcagagctattctcaccctggtctgaaggcaggaggggaggagcagttaatggattctggaagtcgggttgcacagagtcaccttgaaagatgccatgaccttcaccgagggccagacagagactaagctgaccccataggagaataagacctagacctcat-------cctcctg-cctcctgccagtccctgcc-aggggtcgccaatggcaaaacaggactggaagccagaggccatggaagcccgtggatgaagtccacaggccagcctccccgagagcagcctggaCGGTCCGCAGGAGACGTCTCCCGTCTTAGGCGTCCCACGCCGCGTGctcctgttcagccctgccgaggtggaagcttggagtgggtcacggtggatgcattgacgctgcagacgtcagcaagtgctacaaaccagagctggcctttaactcaaa-ctgatggagaaggtgttaataatgcagattagacttaaaagtgttgaagccattgcactgtgaacagcaaaaaaat---tgaagaactcttctggcatttaaaaacaattactcagttcagcagagaagtcactgacaaacgaga--tcacactgactgctttgtcgttttggttttgtcttactcattaatgcaaataagaacattcaccagcatctgtgtcgggcctaccctccctggtcaaatacagctacagtctccctgcagatacgaattttccagaaatgagccgatgttttctgcgagaa--------tcaattggtcatatacaatttacaaaaatgagtaccgtatactgtatttgtaaactgtactctgcagatgctttatttcactgaaatttataatacacttatcc--atgtatatgcatgcatgcatttttattcctgagatccagccgtgaaatgtttaccagcacaTAAATTACCAGCACATGCTCTTTTTTGTTAACCTACTAGGT-AAAATCTTCATTTATTACATCAAATTCTTGTAGTTTTTGTATTGCAATTATGCAGATATTGATTATCGCAGTATTACTGCAATTATACAGAT--------------ACCACAATTTCAGATATTGATCAGCATGTTCAGTTGGTTTCTAGGGAGGTTTACTTACCTCATGGTACACCTAGTTTGCATAGTTTGATTATATTTAACTCTTATGCTAATTGTGGGAAGTCATTGATTTATTCGACAGATGCGCCTGTGGTCTTCCCTGAGCACATCCTGGCCAAGGACGCTG-CCCCAGGAGATTTGAGAAGTCCTGTGAGGATCATGTCAGTATTTTCAAATACTTATAGAAAGGCCAGAGGGATTGACCCAGAATTACCAATATAAGCTTGACCCTGAGATAACAATGCCATTTTATGTTTGCATGCATAAAACCAATGCAAGAGGTTGATGGCCGTTTTATGTTTCAAACATAAAACCAATGCAAGAGGTTGATGGCCATTTTATGTTTGCATGCATAAAACCAATGCAAGAGGCTGATGACTCCAGATCCCTTATATAAGCCAATAAAAAGTAGTTTCATTTTTTATTTCATTTAAAAAAGTGTACCATTAACCTAAAGCCTGCTTGTAAAACCAGTTTGTTTCTGAGGCGTTACCTCAAAGCTCACCTGCATTTGGTGAGAAGTCCCTCACGCGTGGCTGCCCTGGCTGGGAGCTCTGAGCTCTGGGAGCCATTGCAACTGCTAATCCCACCAGTGCCGTCTGATTCCCTCTGCTCTAATGGAGGTCTTTTGCCGGGGTATCAAGTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGAAAATGCCTTTCTTTGTGATATGAAGCTGTCAGTAATGGAGACTGACCTTTTCATAAGTCAGTGAATTTTCTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 168102 1854 + 85365473 GGCTGTCCTCTGGGGAATTCTGCTG-TTCTGTGGGTTCTGTCTGTATCCGTgtcccagcaggaacgcagggcacattagcgtcatccccagagggcttggtaaggggaccgtttgcagagacataggcagagtgctggaaaactacc--aaaaagtgcagtgttctgggcctaataatagcagagctattctcaccctggtctgaagggaggaggggaggagcagttaatggattctggaagtcaggttgcacagagtcaccttgaaagatgccatgaccttcaccgagggccagagagagactaagatgaccccacaggagaataagacgtagacctcat-------cctcctg-cctcctgccagtccctgcc-aggggtcgccaatggcaaaacaggactggaagccagaggccatggaagcccatggatgcagtccacaggccagcgtccccgagagcagCCCGGATGGTCCACAGGAGACATCTCCTGTCTTAGGCGTCCCACGCCACGTGCTCCTGTGCAGCCCTgccaaggtggaagcttagagtgggtcacggtgggtgcactgacactgcagacgtcagcaagtgctacaaaccagagctggcctttaactcaaa-gtgatggagaaggtgttaataaggcagattagacttaaaagagttgaagccattacactgtgagcagcaaaaaaaa---tgaaa---tcttctggcatttaaaaacaattattcaattcagcagagaag---------------------------------------------------ttactcattaatgcaaataagaacattcaccaacatttgtgtagggcctaccctccctggtcaaatacagctataggctccctgcagatacaggttttccagaaatgaacagatgttttctgcgagaa--------tcaattggtcatatacaatttacaaaaatgaataccgtatactacatttgtaaactgtatgctgcagatgctttatatcactgagatttctaataaact----------------catgcatgcatttttgttcctgagatccagctgtgaaatgtttaccagcacaTATATTCCCAGCACATGCTGTTTGTTGTTAACCCACTAGGT-AAAATCTTCAATTATTACATCAAATTCTTGTAGTTTTTGTAT-----------------------------------TGCGATTATACAGAT--------------ACCACAATTTCAGATATGGATCATCATGTTCAGTTGGTTTCTAAGAAGGTTTACTTACCTCGTGGTACACCTAGTTTGCATAGTTTGGTTATATTTAACTCTTATGCTAATTGTGGGAAGTCAGTGATTTATTCGACAGATGCTCCTGTGGTCTTTCCTGAGCAGATCCTGGCCAAGGACGCTGCCCTCTGGAGATTTGAGAAGTCCTGTGAGGATCACGTCAGTATTTTCAAATACTTACAGAAAGGCCAGAGGGACTGACCCAGAATTATCAATATAAGCTTGACCCTGAGATAACAAT-----------------------------------------------------------------------------------------GCCATTTTATGTTTGCATGCATAAAACCAATGCAAGAGGTTGATGACCCCAGATCTCTTATATAAGCCAATAAAAAGTAGTTTCATTTTTTATTTCATTTAAAAAAGTGTACCTTTAACCTAAAGCCTGCTTGTAAAACCAGTTTGTTTCTGAAGCCTTAGCTCAAAGCTCACCTGC-TTTGGTGAGAAGTCCCTCACGCGTGGCTGCCCTGGCTGGGAGCTCTGAGCTCTAGAAGCCATTGCAGCTGCTAATCCCACCAGTGCTGTCTGATTCCCTCTGCTCTAATGGAGGTCTTTTGCCAGGGTATCAACTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGAAAATGCCTTTCTTTGTGATATGAAGCTGTCAGTAATGGAGACTGACCTCTTCATAAATCAGTGAATTTTATT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34014064 1952 + 185818997 GGCTGTCCTCTGGGGAGTTCTGCTG-TTCCCTGGGTTCTGTCTGTGTCGGTGTCCCAGCGGGAATGCCGGGCACTTTAGCGTCATCCCCAgagggcttggtaaggggactgtttgcagagacataggcagagtgctggaaaactacc-agaaaagtgccgtgttctgggcctaataatagcagagctcttctcaccctggtctgaagggaaga-gggaggagcagttaatggattctggaagtcaagtggcacagagtcacctcgaaagatgccatgaccttcaccgagggccagagagatactaagacgaccccataggagaataagacctggacctcat-------cctcctg-cctcctgccagtccctgcc-agggatcgccaatggcagaacaggactggaagccagaggccgtggaagcccatggatgaagtccacaggccagcctccctgagagcagcctggaCGGTCCACAGGAGACATCTCCTTTCTTAGGCGTCCCAGGCCACCTGCTCCTGTTCGGCCCCGCCGAGGtggaagcttggagtgggtcgcggtgggtgcattgacgctgcagacgtcagcaagtgctgcaaaccagagctggcctttaactcaga-gtggtggagaagacgttaatgatgcagatgagacttgaaagtgttgaagcccttacgctgtgag-agcgaaaaaat---taaggaaatcttcaggcgtttaaacacagtgactcaattcagcagagaagtcgctgacaaacaagagctcacactgactgttttgttgttttgg-tttgtcttactcattaatgcaaatgagaacattcaccgacatttgcgtagggcctgccctccctggtcaaatacggctatagtctccctgcagatacaggtttgccagacatgaacagacgttttctgcgagaa--------tcaattggtcacataccatttacaaaaatgagtaccgtatgctacatttgtaaactgtacgctgcagacgctttatttcactaaaatttataataaacttatcc--atgtacacacatgcatgtgtttttgttcctgagatccagctgtgaaatgtttaccagcccaTATATTACCAGCACATGCTGCTTTTT----ACCCACTAGGT-AAAATCTTCATTGATTACATCAAATTATTGTAGGTTGTGTATTGCAATTATACAGATATTGACTATTGCAGTATTACTGCAATTATACAGAT--------------ACCACAGTTTCAAATATTGGTCATCATGTTCAGCTGCTTTCTAAGGAGGTTTACTTACTTCGTGGTACACCTGGTTTGTGTAGTTGGATTATAGTTAACTCTTAGGCTAATTGTGGGAAATCACTGATTTATTCGACAGATGCTGGTGTGGTCTTCCCTGAGCACGTCCTAGCCGAGGACGCTGCCCTCAGGAGATCTGAGAAGTCCTGTGAGGATCACATCGGTATTTTCAAATACTTCTAGAAAGGCCAGAGGGACTGACCCACAATTACCAATTTAAGCTTGACCCTGAGATAACCAT-----------------------------------------------------------------------------------------GCCATTTTATGTTTGCAGACGTAAAACCAATGCAAGAGGTTGATGACTCCAGATCCCTCATACGAGCCAATACAAAGTAGTTTCATGTTTTATTTCATTTTTAAAAGTGTACCATTAACCTAAAGCCTGCCTGTAAAACTGGTTTGTTTCTGAAGCCTTAGCAGAAAGCTCACTTGCGTTTGGTGAGAAGTCCCTCACGCGTGGCTGCCCTGGCTGGGAGCTCTGAGCTCTGGGAGCCACTGGAACTGCTAATCCCACCAGTGCCGTCTGATTCCCTTTGCTCTGATGGAGGTCCTTTGCCGGTGTATCAGGTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGCAAATGCCTTTCTTTGTGATACGAAGCTGTCAGTCATGGACACCCACCTTTTTGTAAGTCAGTGAATTTTCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33630031 1952 + 192294377 GGCTGTCCTCTGGGGAGTTCTGCTG-TTCTCTGGGTTCTGTCTGTGTCGGTGTCCCAGCGGGAATGCCGGGCACTTTAGCGTCATCCCCAgagggcttggtaaggggactgtttgcagagacataggcagagtgctggaaaactacc-agaaaagtgccgtgttctgggcctaataatagcagagctcttctcaccctggtctgaagggaaga-gggaggagcagttaatggattctggaagtcaagtggcacagagtcacctcgaaagatgccatgaccttcaccgagggccagagagatactaagacgaccccataggagaataagacctggacctcat-------cctcctg-cctcctgccagtccctgcc-agggatcgccaatggcagaacaggactggaagccagaggccgtggaagcccatggatgaagtccacaggccagcctccctgagagcagcctggaCGGTCCACAGGAGACATCTCCTTTCTTAGGCGTTCCAGGCCACCTGCTCCTGTTCGGCCCCGCCGAGGtggaagcttggagtgggtcgcggtgggtgcattgacgctgcagacgtcagcaagtgctgcaaaccagagctggcctttaactcaga-gtggtggagaagacgttaatgatgcagatgagacttgaaagtgttgaagcccttacgctgtgag-agcgaaaaaat---taaggaaatcttcaggcgtttaaacacagtgactcaattcagcagagaagtcgctgacaaacaagagctcacactgactgttttgttgttttgg-tttgtcttactcattaatgcaaatgagaacattcaccaacatttgcgtagggcctgccctccctggtcaaatacggctataggctccctgcagatacaggtttgccagacatgaacagacgttttctgcgagaa--------tcaattggtcacataccatttacaaaaatgagtaccgtatgctacatttgtaaactgtacgctgcagacgctttatttcactaaaatttataataaacttatcc--atgtacacacatgcatgtgtttttgttcctgagatccagctgtgaaatgtttaccagcccaTATATTACCAGCACATGCTGCTTTTT----ACCCACTAGGT-AAAATCTTCATTGATTACATCAAATTATTGTAGGTTGTGTATTGCAATTATACAGATATTGACTATTGCAGTATTACTGCAATTATACAGAT--------------ACCACAGTTTCAAATATTGGTCATCATGTTCAGCTGCTTTCTAAGGAGGTTTACTTACTTCGTGGTACACCTGGTTTGTGTAGTTGGATTATAGTTAACTCTTAGGCTAATTGTGGGAAATCACTGATTTATTCGACAGATGCTGGTGTGGTCTTCCCTGAGCACGTCCTAGCCGAGGACGCTGCCCTCAGGAGATCTGAGAAGTCCTGTGAGGATCACATCGGTATTTTCAAATACTTCTAGAAAGGCCAGAGGGACTGACCCACAATTACCAATTTAAGCTTGACCCTGAGATAACCAT-----------------------------------------------------------------------------------------GCCATTTTATGTTTGCAGACATAAAACCAATGCAAGAGGTTGATGACTCCAGATCCCTCATACGAGCCAATACAAAGTAGTTTCATGTTTTATTTCATTTTTAAAAGTGTACCATTAACCTAAAGCCTGCCTGTAAAACTGGTTTGTTTCTGAAGCCTTAGCAGAAAGCTCACTTGCGTTTGGTGAGAAGTCCCTCACGCGTGGCTGCCCTGGCTGGCAGCTCTGAGCTCTGGGAGCCACTGGAACTGCTAATCCCACCAGTGCCGTCTGATTCCCTTTGCTCTGATGGAGGTCCTTTGCCGGTGTATCAAGTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGCAAATGCCTTTCTTTGTGATACGAAGCTGTCAGTCATGGAGACCCACCTTTTTGTAAGTCAGTGAATTTTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4397248 1952 - 9440265 GGCTGTCCTCTGGGGAGTTCTGCTG-TTCTCTGGGTTCTGTCTGTGTCGGTGTCCCAGCGGGAATGCCGGGCACTTTAGCGTCATCCCCAgagggcttggtaaggggactgtttgcagagacataggcagagtgctggaaaactacc-agaaaagtgccgtgttctgggcctaataatagcagagctcttctcaccctggtctgaagggaaga-gggaggagcagttaatggattctggaagtcaggtggcacagagtcacctcgaaagatgccatgaccttcaccgagggccagagagatactaagacgaccccataggagaataagacctggacctcat-------cctcctg-cctcctgccagtccctgcc-agggatcgccaatggcagaacaggactggaagccagaggccgtggaagcccatggatgaagtccacaggccagcctccctgagagcagcctggaCGGTCCACAGGAGACATCTCCTTTCTTAGGCGTCCCAGGCCACCTGCTCCTGTTCGGCCCTGCCGAGGTGGAAGCTTGGAGTGGGTCGCGGTGGGTGCATTGACGCTGCAGACGTCAGCAAGTGCTGCAAACCAGAGCTGGCCTTTAACTCaga-gtggtggagaagacgttaatgatgcagatgagacttgaaagtgttgaagccattacgctgtgag-agcgaaaaaat---taaggaaatcttcaggcgtttaaacacagtgactcaattcagcagagaagtcactgacaaacaagagctcacactgactgttttgttgttttgg-tttgtcttactcattaatgcaaatgagaacattcaccaacatttgcgtagggcctgccctccctggtcaaatacggctataggctccctgcagatacaggtttgccagacatgaacagacgttttctgcgagaa--------tcaattggtcacataccatttacaaaaatgagtaccgtatgctacatttgtaaactgtacgccgcagacgctttatttcactaaaatttataataaacttatcc--atgtacacacatgcatgtgtttttgttcctgagatccagctgtgaaatgtttaccagcccaTATATTACCAGCACATGCTGCTTTTT----ACCCACTAGGT-AAAATCTTCATTGATTACATCAAATTATTGTAGGTTGTGTATTGCAATTATACAGATATTGACTATTGCAGTATTACTGCAATTATACAGAT--------------ACCACAGTTTCAAATATTGGTCATCATGTTCAGCTGCTTTCTAAGGAGGTTTACTTACTTCGTGGTACACCTGGTTTGTGTAGTTGGATTATAGTTTACTCTTAGGCTAATTGTGGGAAATCACTGATTTATTCGACAGATGCTGGTGTGGTCTTCCCTGAGCACGTCCTAGCCGAGGACGCTGCCCTCAGGAGATCTGAGAAGTCCTGTGAGGATCACATCGGTATTTTCAAATACTTCTAGAAAGGCCAGAGGGACTGACCCACAATTACCAATTTAAGCTTGACCCTGAGATAACCAT-----------------------------------------------------------------------------------------GCCATTTTATGTTTGCAGACGTAAAACCAATGCAAGAGGTTGATGACTCCAGATCCCTCATACGAGCCAATACAAAGTAGTTTCATGTTTTATTTCATTTTTAAAAGTGTACCATTAACCTAAAGCCTGCCTGTAAAGCTGGTTTGTTTCTGAAGCCTTAGCAGAAAGCTCACTTGCGTTTGGTGAGAAGTCCCTCACGCGTGGCTGCCCTGGCTGGGAGCTCTGAGCTCTGGGAGCCACTGGAACTGCTAATCCCACCAGTGCCGTCTGATTCCCTTTGCTCTGATGGAGGTCCTTTGCCGGTGTATCAAGTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGCAAATGCCTTTCTTTGTGATACGAAGCTGTCAGTCATGGAGACCCACCTTTTTGTAAGTCAGTGAATTTTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16985276 1946 - 21915920 GGCTGTCCT---------------------CTGGGTTCTGTCTGTGTCGGTGTCCCAGCGGGAATGCCAGGCACTTTAGCGTCATCCCCAgagggcttggtaaggggactgtttgcagaggcataggcagagtgctggaaaactacc-agaaaagtgccgtgttctgggcctaataatagcagagctcttctcaccgtggtctgaagggaaga-gggaggagcagttaatggattctggaagtcaggtggcacagagtcacctcgaaagatgccatgaccttcaccgagggccagagagatactaagacgaccccataggagaataagacctggacctcat-------cctcctg-cctcctgccagtccctgcc-agggatcgccaatggcaaaacaggactggaagccagaggctgtggaagcccatggatgaagtccacaggccagcctccctgagagcagcctggaCGGTCCACAGGAGACATCTCCTTTCTTAGGCGTCCCAGGCCACCTGCTCCTGTTCGGCCCTGCTGAGGtggaagcttggagtgggtcgcggtgggtgcattgacgctgcagacgtcagcaagtgctgcaaaccagagctggcctttaactcaga-gtggtggagaagacgttaatgatgcagatgagacttgaaagtgttgaagccattacgctgtgag-agcgaaaaaat---taaggaaatcttccggcgtttaaacacaatgactcaattcagcagagaagtagctgacaaacaagagctcacactgactgttttgttgttttgg-tttgtcttactcattaatgcaaatgagaacattcaccaacatttgcgtagggcctgccctccctggtcaaatacggctataggctccctgcagatacaggtttgccagacatgaacagacgtcttctgcgagaa--------tcaattggtcacataccatttacaaaaatgagtaccgtatgctacatttgtaaactgtacgctgcagacactttatttcactaaaatttataataaacttatcc--atgtacacacatgcacgtgtttttgttcctgagatccagctgtgaaatgtttaccagcccaTATATTACCAGCACATGCTGCTTTTT----ACCCATTAGGT-AAAATCTTCATTGATTACATCAAATTACTGTAGGTTGTGTATTGCAGTTATACAGATATTGACTATTGCAGTATTACTGCAATTATACAGATTTTTGATATTTGAAACCACAGTTTCAAATATTGGTCATCACGTTCAGCTGCTTTCTAAGGAGGTTTACTTACTTCGTGGTACACCTGGTTTGTGTAGTTGGATTATAGTTAACTCTTAGGCTAATTGTAGGAAATCACTGATTTATTCGACAGATGCTCGTGTGGTCTTCCCTGAGCACATCCTAGCCGAGGACGCTGCCCTCAGGAGATCTGAGAAGTCCTGTGAGGATCACATCGGTATTTTCAAATACTTCTAGAAAGGCCAGAGGGACTGACCCAGAATTACCAATTTAAGCTTGACCCTGAGATAACCAC-----------------------------------------------------------------------------------------GCCATTTTATATTTGCAGACGTAAAACCAATGCAAGAGGTTGATGACTCCAGATCCCTCATACGAGCCAATACAAAGTAGTTTCTTGTTTTATTTCATTTTTAAAAGTGTACCATTAACCTAAAGCCTGCCTGTAAAACCGGTTTGTTTCTGAAGCCTTAGCGGAAAGCTCACCTTTGTTTCGTGAGAAGTTCCTCACGCGTGGCTGCCCTGGCTGGGAGCTCTGAGCTCTGGGAGCCACTGGAACTGCTAATCCCACCAGTGCCGTCTGATTCCCTTTACTCTGCTGGAGGTCCTTTGCCAGTGTATCAAGTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGCAAATGCCTTTCTTTGTGATACGAAGCTGTCAGTCATGGAGACCCACCTTTTCGTAAGTCAGTGAATTTTCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 120861 1932 - 21531802 GGCTGTCCTCTGGGGAGCTCTGCTG-TTCTCCGGGT----TCTGTGTCGGTGTCCCAGCGGGAACGCAGGGCACTTTAGTGTCATCCCCAgagggcttggtcaggggactgtttgcacagacgtaggccgagtgctggaaaactacc-agaaaagtgccgtgttctgggcctaataatagcagagctcttctcaccctggtctgaagggaaga-gggaggggcagttaatggattctggaagtcaggtggcacagagtcacctcgaaagatgccgtgaccttcaccgagggccagagacagactaagatgacctcataggagaataagacctggacctcat-------cctcctg-cctcctgccagtccctgcc-agggatcgccaaaggcaaagcaggactggaagccagaggccatggaagcccatggatgaagtccacaggccagcctccccgagagcagcctggaCGGTCCACAGGAGACATCTCCTTTCTTAGGCGTCCCAGGCCACCTGCTCCTGTTCGGCCCTGCCGAGGtggaagcttggagtgggtcacggtggatgcattgatgctgcagacgtcagcaagtgctgcaaaccagggctggcctctgactcaga-gtggtggtgaagacgttaatgatgcagatgacacttgaaagtgttgaagccattacgctgtgag-agtgaaaaaat---taaggaaatcttccggcgtttagacacaatgactcaa---------------gctgacaaacgagagctcacactgactgttttgttgttttgg-tttgtctcactcattaatgcaaatgagaacattcaccaacatttgcgtagggcctgccctccctggtcaaatacgactgtaggctccctgcagatacaggtctgccagacatgaacagacgttttctgcgagaa--------tcagttggtcatatacagtttacaaaaatgggtaccgtatactacatttgtaaactgtacgctgcagatgctttatttcactaaaatttataataaacttatcc--atgtatacacatgcacgtgtttttgttcctgagatccagctgtgaaatgtttaccagcccatcTATTACCAGCACATGCTGCTTTTT----ACCCACTAGGT-AAAATCTTCACTGATTACATCAAATTATTGTAGGTTGTGTATTGCAATTATACATATGTTGACTATTGCAGTATTACTGCAATTATACAGAT--------------ACCACAGTTTCAAATATTGGTCATCATGCTCAGCTGCTTTCTAAGGAGGTTTACTTACTTCGTGGTACACCTGGTTTGTGTAGTTGGATTATAGTTAACTCTTAGGCTAATTGCGGGAAATCGCTGATTTATTCGACAGATGCTCCTGTGGTCTTCCCTGAGCACGTCCTGGCCGAGGACGCTGCCCTCAGGAGATCTGAGAAGTCCTGTGAGGATCACATCAGTATTTTCAAATACCTCTAGAAAGGCCAGAGGGACTGACCCAGAATTACCAATTCGAGCTTGACCCTGAGATAACCAC-----------------------------------------------------------------------------------------GCCATTTTACGTCTGCAAACGTAAAACCAATGCAAGAGGTTGATGACTCCAGATCCCTCATACGAGCCAATACAAGGTAGTTTCGTGTTTTATTTCA-TTTTAAAAGTGTACCATTAACCTAAAGCCTGCCTGTAAAACCGGTTTGTTTCTGAAGCCTCAGCGGAAAGCTCACCTGCCTTTGGTGAGAAGCCCCTCACACGTGGCTGCCCTGGCCGGGAGCTCCGAGCTCTGGGAGCCGCTGGAACTGCTAATCTCACCAGTGCCGTCTGATTCCCTTTGCTCTAATGGAGGTCCTTTGCCGGTGTATCAAGTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAATGTCCCTGCTCCACAAATGCCTTTCTTTGTGATACGAAGCTGTCAGTCATGGAGACCGACCTTTTCGTAAGTCAGTGAATTTTCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 153471 1952 - 2515279 GGCTGTCCTCTGGGGAGTTCTGCTG-TTCTCTGGGTTCTGTCTGTGTCGGTGTCCCAGCGGGAATGCCGGGCACTTTAGCGTCATCCCCAgagggcttggtaaggggactgtttgcagagacataggcagagtgctggaaaactacc-agaaaagtgccgtgttctgggcctaataatagcagagctcttctcaccctggtctgaagggaaga-gggaggagcagttaatggattctggaagtcaagtggcacagagtcacctcgaaagatgccatgaccttcaccgagggccagagagatactaagacgaccccataggagaataagacctggacctcat-------cctcctg-cctcctgccagtccctgcc-agggatcgccaatggcaaaacaggactggaagccagaggccgtggaagtccatggatgaagtccacaggccagcctccctgagagcagcctggaCGGTCCACAGGAGACATCTCCTTTCTTAGGCGTCCCAGGCCACCTGCTCCTGTTCGGCCCTGCCGAGGtggaagcttggagtgggtcgcggtgggtgcattgacgctgcagacgtcagcaagtgctgcaaaccagagctggcctttaactcaga-gtggtggagaagacgttaatgatgcagatgagacttgaaagtgttgaagccattacgctgtgag-agcgaaaaaat---taaggaaatcttctggcgtttaaacacaatgactcaattcagcagagaagtcgctgacaaacaagagctcacactgactgttttgttgttttgg-tttgtcttactcattaatgcaaatgagaacattcaccaacatttgcgtagggcctgccctccctggtcaaatacggctataggctccctgcagatacaggtttgccagacatgaacagacgtcttctgcgagaa--------tcaattggtcacataccatttacaaaaatgagtaccgtatgctacatttgtaaactgtacgctgcagacactttatttcactaaaatttataataaacttatcc--atgtacacacatgcacgtgtttttgttcctgagatccagctgtgaaatgtttaccagcccaTATATTACCAGCACATGCTGCTTTTT----ACCCACTAGGT-AAAATCTTCATTGATTACATCAAATTATTGTAGGTTGTGTATTGCAATTATACAGATATTGACTATTGCAGTATTACTGCAATTATACAGAT--------------ACCACAGTTTCAAATATTGGTCATCACGTTCAGCTGCTTTCTAAGGAGGTTTACTTACTTCGTGGTACACCTGGTTTGTGTAGTTGGATTACAGTTAACTCTTAGGCTAATTGTGGGAAATCACTGATTTATTCGACAGATGCTGGTGTGGTCTTCCCTGAGCACGTCCTAGCCGAGGACGCTGCCCTCAGGAGATCTGAGAAGTCCTGTGAGGATCACATCGGTATTTTCAGATACTTCTAGAAAGGCCAGAGGGACTGACCCAGAATTACCAATTTAAGCTTGACCCTGAGATAACCAC-----------------------------------------------------------------------------------------GCCATTTTATGTTTGCAGACGTAAAACCAATGCAAGAGGTTGATGACTCCAGATCCCTCATACGAGCCAGTACAAAGTAGTTTCATGTTTTATTTCATTTTTAAAAGTGTACCATTAACCTAAAGCCTGCCTGTAAAACCTGTTTGTTTCTGAAGCCTTAGCGGAAAGCTCACCTGCGTTTGGTGAGAAGTCCCTCACGCGTGGCTGCCCTGGCTGGGAGCTCTGAGCTCTGGGAGCCACTGGAACTGCTAATCCCACCAGTGCCATCTGATTCCCTTTGCTCTGATGGAGGTCCTTTGCCGGTGTATCAAGTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAGTGTCTCTGCTCTGCAAATGCCTTTCTTTGTGATATGAAGCTGTCAGTCATGGAGACCCACCTTTTGGTAAGTCAGTGAATTTTCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 311139 1927 + 6586416 GGTTGTCCTCTGGGGAGTTCTGCTG-TTCTCTGGGTTCtgtctgagtcggtgtcccagcgggaatgcagggcacattggcgtcatccccagagggcttggtaaggggactgtttgcagagacataggcagagcgctggaaaactacc-agaaaagtgcagtgttctgggcctaataatagcagagctcttctcactctggtctgaagggatga-gggaggagcagttaatggattctggaagtcaggtggcacaaagtcaccttgaaagatgccatgaccttccccgagggccagagagagactaagatgaccccataggagaataagacctggacctcat-------cctcctgccctcctgccagtccctccc-agggatcgccaatggcaaagcaggactggaagccagaggccatggaagcccatgg----agtccacaggccagcctccccgagagcagcctggaCGGTCCACAGGAGACATCTCCTTTCTTAGGCGTCCCAGGCCACCTGCTCCTGTTCAGCCCTGCCAAGCTGGAAGCTGGGAGTGGGTCACGGTGGGTGCATTGACGCTGCAGACGTCAGCAAGTGCTGCAAACCAGAGCTGGCCTTTAACTCaga-gtggtggagaagacattaatgatgcagatgagacttgaaagtattgaagtcattacactgtgag-agcgaaaaaat---taaggaaatcttctggcgtttaaacacaatgactcaattcagcagagaagtcgctgacaaacaagacctcacactgactgtt---ttgttctgg-tttgtcttactcattaatgcaaatgagaacaatcaccaacatttgcgtaggacctgccctccctggtcaaatacggctatgggctccctgcagatacaagtttgccagacatgaacagacgttttctgcaagaa--------tcaattggtcatacacaatttacaaaaatgagtaccatatactacatttgtaaactgtacgcagcagacgctttatttcactaaaatttataataaacttatcc--gtgtatatacatgcatgtgtttttgttcctgagatgcagctgtgaaatgt---------------ttaccagcacaTGCTTCTTTTT----ACCCACTAGGT-AAAATCTTCATTGATTACATCAAATTCTTGCAGTTTTTGTGTTGCGATTATACAGAT----ACTATTGCAGTATTACTGCAATTATACAGAT--------------ACCGCAGTTTCAAATACTGGTCATCATGTTCAGCTGCTTTCTAAGGAGGTTTACTTACTTCATGGTACACCTGGTTTGTGTAGTTGGATTCTAGTTAACTCTTAGGCTAATTGTGGGAAATCGCTGATTTATTCGACAGATGCTCCCGTGGCCTTCCCTGAGCACGTCCTGGCCAAGGACGCTGCCCTCAGGAGCTCTGAGAAGTCCTGTGAGGATCACATCAGTATTTTCAAATACTTCTAGAAAGGCCAGAGGGACTGACCTAGAATAACCAATTTAAGCTTGACCCTGAGATAACCAT-----------------------------------------------------------------------------------------GCCATTTTATGTTTGCAGACGTAAAACCAATGCAAGAGGCTGATGACTCCAGATCCCTTGTAGGAGCCAATACAAAGTAGTTTCGTGTTTTATTTCATTTTAAAAAGTGTACCATTAACCTAAAGCCTGCCTGTAAAGCCGGTGTGTTTCTGAAGCCTTAGCGGAAAGCTCACCTGCGTTTGGTGAGACGTCCCTCACGCGTGGCTGCCCTGGCTGGGAGGTCTGAGCTCTGGAAGCCACTGGAACTGCTAATCCCACCAGTGCCGTCTGATTCCCTTTGCTCTAATGGAGGTCCTTTGCCGGTGTATCAAGTGGCATTTTCTGGGCTTGGGAGTCAGTAATTCCCAGTGATCAAATGTCTCTACTCTGCAAATGCCATTCTTTGTGATACGAAGCTGTCAGTCATGGAGACCGACCTTTTCGTAAGTCAGTGAATTTTCTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 39586 1938 + 138751 GGCTGTCCTCTGGGGAGTTCTGCTGTTTCTGTGGGTTCTGTCTGTATCTGTGTCCCTGCAGGAACACAGGGCACATTAGCATCATCCCCAgagggcttggtaaggggactgtttgcagagacataggcagagtgctggaaaactacc-aaaaaagtacagtgttctgggcctaataatagcagagctattctcaccctggtctgaagggatgaagggaggagcagttaatggaTTCTGGAAGTCAAGTTGCACAGAGTCACCTTGAAAGATGCTATGATCTTCACCAAGGGCC--AGAGAGACTACCATGACCA---gagagagtaaaacctaga-cttac-------gctcccg-cctcctgccattccctgtc-acgggtccccactggcaaaacaggactggaagccagaggctatgaaagccaatggatgaagtccacaggccagcctccccgagcacagCCTGGATGGTCCACGGGAGGCATCTCCTTTCTTAGGTGTCCCATGCCGCACGCTCCTGTTCAGCCTTGCCGAGGtggaagcttggagtgagtcatggtaggcacatggacgctgcagatgtctgcaagtgctaccaaccagggccatcctttaactcaaaagtgatggcgaagacattaataatgcagattagacttaaaagtgttgaagccaatacattgtgagtagcaaaaaaaaa--taaggaaatcttctggca-ttaaaaacagttatttaattcagctgagaagtcactgacaaacaagagatcacactgacttctttgttgttttggttttctctgactcattaatgcagatgagaacactcaccaacatttatgtagggcctaccctccctggtcaaatacagctataggttccctgcggatacaactttgccagaattgaacagatgttttctgtgagaa--------tcaatcgatcatacagaatttacaaaaatgagtactatatactgtatttgtaaactgtatgctgcagatgctttattttactaaaaaatttaatacacttaccc--gtgtatatacatgcatgcatttttgttcctgagatccagctgtgaaatgtttaccagaacaTATATTACTAGCACATGCT-TTTTTT----ACCCACTAGGT-AAAAACTTCATTTATCACATCAAATTCTTGTAGTTTTTGTATTGCAATTATACAGATATTGACTGTTGCAATATTATTGCGGTTAGACATAT--------------ACTGCAATTTCAGATATTG-TCAT--------GTTAGTTTCTAAGGAGGTTGACTTACCTCATGGTAGACCTAGTTTGCATAGTCTAATTATATTTAACTCCTATTCTAATTGTGGGAAATCATCGGTTTAGTCAACAGATGCTCCTGTGGTCTTTCCTGAGCACATCCTGGCCAAGGATGCTGTCCTCAGGAGATTTGAGAATTCCTGTGAGGATCACATCAGCATTTTCAAATACTTACAGAAAGGCCAGAGGGACTGACCCAGAATTATCAATATAATCTTAACCCTGAGATAACAAC-----------------------------------------------------------------------------------------ACCATTTTATGTTTGCATGCAGAAAACCAATGCAAGAGGTTGATTACTTTAGATCTCTTATGTAATCCAA-AAAAAGTAGTTTCATTTTTTATTTCATTT-AAAAAGCGTACCACTAACCTAAAGCCTGCTTGTAAGATCGTTTAGTTGCTGAAGCCTTAGCTCAAATCTCACCTGCATTTGGTGAGAAGTCCCTCACGCAAGGCTGCCCTGGCTGGGAGCTCTGAGCAGTGAGA-CAAATGGTACTGCTAATCCCACCGGTGCCGTCCAGTTCCCTCTGCTCTAATGGAGGTCTTTTGCTGGTGTATCAAGTGGCATTTTCTGGGCTTGAGGGTCAATAATTCTCAGTGATCAAGTGTCTCTGCTCTGAAAATGCCTTTCTTTGTGATATGAAGCTGTCAGTAATGGAGACTGACCTTTTCATAAGTCAGTTAATTTTCTT i calJac3.chrUn_GL286444 C 0 I 943 s saiBol1.JH378296 354655 1948 - 2409723 GGCTGTCCTCCGGGCAGTT---CTGTTTCTGTGGGTTCTGTCTGTATCTGTgtccctgcaggaacacagggcacattagcatcatccccagagggcttggtaaggggactgtttgcagagacataggcagagggctggataactaccaaaaaaagtgcagtgttctgggcctaataatagcagagctcttctcaccctggtctgaagggatgaggggaggagcagttaatggattctggaagtcaggttgcacagagtcaccttgaaagatgttatgaccttcaccgagggccagagagagactaacatgaccccataagagagtaaaacctgga-cttat-------gctcctg-cctcctgccattccctgcc-acgggtccccactggcaaaacaggacgggaagccagaggctatgaaagccaatggatgaagcccacaggccagcctccccgagcgcaACCTGGAGGGTCCACAGGAGGCATCTCCTTTCTTAGGCGTCCCACGCCACATGCTCCTGTTCAGCCTTGCTGAGGtggaagcttggagtgggtcacggtgggcacgtgggcgctgcagacgtcagcaagcgctacaaaccagggccatcctttaactcaaacgtgatggagaagacattgataacgcagattagacttaaaagtgttgaagccaatacattgtgagtagcaaaaaaaaaattaagggaatcttctggca-ttaaaaacagttactcaattcagcagagaagtcactgacaaac--gagatcacactgacttct---ttgttttgcttttgtctgactcatgaatgcagatgagaacactcaccaactttagtgtagggcctgccctccctggtccaatacagctgtaggttccctgcggatacaagtttgtcagaattaaacagatgttttctgcaagaatgttttcttcaattgatcatacagaatttacaaaaatgagtaccatatactgtatttgtaaactgtatgctgcagatgctttattttactaaaaattgtaataaacttacccatatatatatacatgcatgcatttttgttcctgagatccagctgtgaaatgtttaccagcacaTACATTACCAGCACATGCT-TTTTTT----ACCCACTAGGT-AAAATCTTCATTTATCACATCGAATTTTTGTAGTTTTTGTATTGCAATTGTACAGGTATTGACTATTGCAACATTATTGCTGTTATACAGAT--------------ACTGCAATCTCAGATATTG-TCAT--------GTTGGTTTCTAAGGAGGTTGACTTACCTCATGGTACACCTAGTTTGCATAGTTTGCTTATATTTAACTCCTATTCTAATTGTGGGAAAGCATCAATTCAGTCAACAGATGCTCCTGTGGTCTTTCCCGAGCACATCCTGGCCAAGGATGCTGTCCTCAGGAGATTTGAGAAGTCCTGTGAGGATCACGTCAGCATTTTCAAATACTTACAGAAAGGCCAGAGGGACTGACCCAGAATTAGCAATAGAAGCTTGACCCTGAGATCACAAC-----------------------------------------------------------------------------------------A-CATTTTATGTTTGCATGTAGAAAACCCATGCAAGAGGTTGATTACTCCAGATCTCTTATGTAATCCAATAAAAAGTAGTTTCATATTTTATTTCGTTT-AAAAAGCATAGCATTAACCTAAAGCCTGCTTGTGAAACCGTTTCGTTGCTGAAGCCTTAGCTCAAAGCTCACCTGTATTTGGTGAGAAGTCCCTCACGCAAGGCTGCCCTGGCTGGGAGCTCCGAGCAGTGGAA-CTAATGGTACTGCTAATCCCACCGGTGCCGTCCGATTCCCTGTGCTCTAATGGAGGACTTTCGCTGGTGTATCAAGTGGCATTTTCTGGACTTGCGAGTCAATAATTCTCAGTGATCAAGTGTCTCTGCTCTGAAAATGCCTTTCTTTGTGATACGAAGCTGTCAGTAATGGAGACTGACCTTTTCATAAGTCAGTTAATTTTCTT i saiBol1.JH378296 C 0 I 1261 s cebCap1.NW_016107703v1 518500 1931 - 2125214 GGCTGTCCTCTGGGGAGTTCTGCTGTTTCTGTGGGTTCTGTCTGTgtctgtgtccctgcaggaacacagggcacattagcatcatccccagagggcttggtaaggggactgtttgcagagacataggcacagtgctggaaaactacc-aaaaaagtgcagtgttctgggcctaataatagcagaactattctcaccctggtctgaagggatgaggagaggcgcagttaatggattctggaagtcaagttgcacagagtgaccttgaaagatgctatgaccttcaccgagggccagagagagactaacatgaccccataagaaagtaaaacctgga-cttat-------gctcccg-cctcctgccattccctgccaactagtccccactggcaaaacaggactggaagccagaggctatgaaagccaatggatgaagtccacaggccagcctccccgagcacagCCTGGACGGTCCATAGGAGGCATCTCCTTTCTTAGGCGTCCCATGCCGCGTGCTCCTGTTCAGCCTTGCGGAGGTGGAAGCTTGGAGTGGATCACGGTGGGCACATGTACGCTGCAGACGTCAGCAAGTGCTACGAACCAGGGCCGTCCTTTAacttaaaagtgatggagaagatattaataatgcagattagacttaaaagtgttgaagctaatacattgtgagtagcaaaaaaaat--taaggaaatcttctggca-ttaaaaacagttattcaattcagcagagaagtcactgacaaacaagagaacacactgacttctttgttgttttgcttttgtctgactcattaatgcagatgagaacactcactgacgtttgtgtaaggcctaccctccctggtcaaatacagctgtaggttccctgcggatacaagtttgtcagaattgaacagatgttttctgcgagaa--------tcaattgatcatacagaatttacaaaaatgaataccatatactgtatttgtaaactgtatgctgcagatgctttattttactaaaaaatgtaataaacttatcc--atgtatatacatgcatgcatttttgttcctgagatccagctgtgaaatgtttaccagcacaTATATTACCAGCACATGCT-TTTTTT----ACCCACTAGGT-AAAATCTTCTTTTATCACATCAAATTCTTGTAGTTTTTGTATTGCAATTATACAGATATTGACTATTGCAATATTATTGGGGTTATACAGAT--------------ACTGCAATTTCAGATATTG-TCAT--------GTTGGTTTCTAAGGAGGTTGACTTACCTCATGGTACACCTAGTTTGCATAGTTTGATTATATTTAACTCCTATTCTAATTGTGGGAAATTATCGATTTAGTCAACAGATGCTCCTGTGGTCTTTCCCGAGCACATCCTGGCCA--------------AGGAGATTTGAGAAGTCCTGTGAGGATCACGTCAGCATTTTCAAATACTTACAGAAAGGCCAGAGGGACTGACACAGAATTAGTAATATAAGCTTGACCCTGAGATTACAAC-----------------------------------------------------------------------------------------ACCATTTTATGTTTGCATGCAGAAAACCAGTGCAAGAGATTGATTACTCCAGATCTCTTATGTAATCCAATAAACAGTAGTGTCATTTTTTATTTAGTTT-AAAAAGCGTAGCATTCGCCTAAAGCCTGCTTGTGAAACCGTTTAGTTGCTGAAGCCTTAGCTCAAAGCTCACCTGTATTTGGTGAGAAGCCCCTCACGCAAGGCTGCCCTGGCTGGGAGCTTTGAGCAGTGGGA-CAAATGGTACTGCTAATCCCACCGGTGCCGTCCGATTCCCTCTGCTCTAATGGAGGACTTTTGCTGGTGTATCAAGTGGCATTTTCTGGGCTTGAGAGACAATAATTCTCGGTGATCAAGTTTCTCTGCTCTGAAAATGCCTTTCTTTGTGATACGAAGCTGTCAGTAATGGAGGCTGACTTTTTCATAAGTCAGTTAATTTTCTC i cebCap1.NW_016107703v1 I 30 C 0 s aotNan1.NW_018514293v1 106998 1894 + 376347 GGCTGTCCTCTGGGGACTTCTGCTGTTTCTGTGGGTTCTGTCTGTAtctgggtccctgcaggaacacaggacacattagcgtcatccccagagggcttggtaaggggactgtttgcagagacataggcagagtgctggaaaactacc-aaaaaagtgcagttttctaagcctaataatagcagagctgttctcaccctggtctgaagggatgaggggaggagcagttaatggattctggaagtcaagttgcacacagtcaccttgaaagatgctatgaccttcaccgagggccagagagagactaacgtgaccccataagagagtaaaacctgga-cttac-------gctcccg-cctcctgccattccctgcc-acggatccccactggcaaaacaggactggaagccagcggc-atagaagccaatggatgaagtccacaggccggcctccccgagcgcagCCTGGACAGTCCACGGGAGGCATCTCCTTTCTTAGGCGCCCCACACCACATGCTCCTGTTCAGCCTTGCGGAGGCggaagcttagagtgggtcacggtgggcacatggacgctgcagacgtcagcaagtgctacaaaccagggccgtcctttaactcaaaagtgatggagaagacgttaatca-gcagatgagacttaaaagtgttgacgccaatacattgtgagtagaaaaaaaaat--gaaggaaatcttctggca-ttaaaaacagttactcaattcagcagagaagtcactggcacac--gagctcacactgacttcttcgttgttttgctttcgtccgactcgttaatgcagatgagaacacccaccaacgtctgtgtaggacctgccctccctggtcagacatggctgtaggttccctgcggatacaggtttgccagaattgaacagatgttttccgcgagaa--------tcgattgatcatacagaatttacaaaaacgagtgccgtatactgtatttgtaaaccgtatgctgcagatgcttgattttactaaaaagtgtaatgaacttatcc--atgtatgtacgcgcgtgcgtttctgttcctgagatccagctgtgaaccgtttaccagcacaT-----------ACATGC--TTTTTT----ACCCACTAGGTAAAAATCTTCATTTATCACGTCAAATTCTCGTAGTTTTGGTATTGCAATTTCACAG-----------------------------------AT--------------GCTGCAGTTTCAGGTACTG-TCAG--------GTGGGTTTCTAAGGAGGTTGACTTACCTCATGGTACACCTACTTTGCATGGTTTGATCATATTTAACTCCTATTCTAATTGTCGGAAATCATCGATTTAGTCAACAGATGCTCCTGTGGTCTTTCCCGAGCACATCCTGGCCAAGGATGCTGTCCTCAGGAGATTTGAGAAGTCCTGTGAGGATCACATCAGCATTTTCAGATACTTACAGAAAGGCCAGAGGGACTGACCCCGAATTATCAGTATAAGCTTGACTGTGAGATAACAAC-----------------------------------------------------------------------------------------ACCGTTTTATGTTTGCATGCAGAAAACCAATGCAAGAGGCTGATTACTCGAGATCTCTTATGTAATCCAGTAAGAAGTAGTTTCATTTTTTATTTCGTTT-AAAAAGCATACCATTAACCTAAAGCCTGCTTGTAAAACCATTTCGTTGCTGCAGTCCTAGCTCAAAGCTCACCTGTATTTGGTGAGAAGTCCCTCACGCAAGGCTGCCCTGGCTGGGAGCTCTGAGCACTGGGA-CAGATGATACTGCTGATCCCACCGGTGCCGTCCGATTCCCTCTGCTCTAATGGAGGTCTTTTGCTGGTGTATCAAGTGGCATTTTCTGGGCTTGAGAGTCAATAATTCTTGGTGATCAAGTGCCTCTGCTCTGAAAATGCCTTTCTTTGTGGTATGAAGCTGTCAGTAGTGGAGACTGACCTTTTCATAAGTCAGTTAATTTTCTT i aotNan1.NW_018514293v1 I 30 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I a score=122214.000000 s hg38.chr7_KI270899v1_alt 148121 14 + 190869 TCTCTGAGTCATTT s panTro5.chr7_NW_015973580v1_random 22424 14 - 83720 TCCCTGAGTCATTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538255 14 + 162613886 TCCCTGAGTCATTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109659 14 - 432965 TCCCTGAGTCATTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 169956 14 + 85365473 TCCCCGAGTCATTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016016 14 + 185818997 TCCCCAAGTCACTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33631983 14 + 192294377 TCCCCAAGTCACTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399200 14 - 9440265 TCCCCAAGTCACTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987222 14 - 21915920 TCCCCAAGTCACTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 122793 14 - 21531802 TCCCTGAGTCACTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155423 14 - 2515279 TCCCCAAGTCACTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313066 14 + 6586416 TCCCCCAGTCACTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 42467 14 + 138751 tccCCAAGTCATTT i calJac3.chrUn_GL286444 I 943 C 0 s saiBol1.JH378296 357864 14 - 2409723 ttcCCAAGTCATTT i saiBol1.JH378296 I 1261 C 0 s cebCap1.NW_016107703v1 520431 14 - 2125214 TGCCGGAGTCATTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 108892 14 + 376347 TGCCCGAGTCATTT i aotNan1.NW_018514293v1 C 0 I 964 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I a score=10920.000000 s hg38.chr7_KI270899v1_alt 148135 1 + 190869 T s panTro5.chr7_NW_015973580v1_random 22438 1 - 83720 T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538269 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109673 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 169970 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016030 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33631997 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399214 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987236 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 122807 1 - 21531802 T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155437 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313080 1 + 6586416 T i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 42481 1 + 138751 T i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 357878 1 - 2409723 T i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 520445 1 - 2125214 T i cebCap1.NW_016107703v1 C 0 I 987 s aotNan1.NW_018514293v1 109870 1 + 376347 T i aotNan1.NW_018514293v1 I 964 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I a score=260239.000000 s hg38.chr7_KI270899v1_alt 148136 31 + 190869 AGAGAGTGAATCTGAACTCTCCAGTCTGTCC s panTro5.chr7_NW_015973580v1_random 22439 31 - 83720 AGAGAGTGAATGTGAACTCTCCAGTCTGTCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538270 31 + 162613886 AGAGAGTGAATGTGAACTCTCCAGTCTGTCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109674 31 - 432965 AGAGAGTGAATGTGAACTCTCCAGTCTGTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 169971 31 + 85365473 AGAGAGTGAATCTGAACCCTCCAGTCTGTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016031 31 + 185818997 AGAGAGTGAATCTGAACTCTCCAGTCCATCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33631998 31 + 192294377 AGAGAGTGAATCTGAACTCTCCAGTCCATCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399215 31 - 9440265 AGAGAGTGAATCTGAACTCTCCAGTCCATCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987237 31 - 21915920 AGAGAGTGAATCTGAACTCTCCAGTCCATCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 122808 26 - 21531802 AGAGAGTGAATCTGAACTCTCCAGT-----C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155438 31 - 2515279 AGAGAGTGAATCTGAACTCTCCAGTCCATCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313081 31 + 6586416 AGAGAGTGAATCTGAACTCTCCAGTCCATCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 42482 31 + 138751 AGAGAGTGAATCCAAACTCTCCAGTGTGTCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 357879 31 - 2409723 AGAGAGTGAATCCAAACTCTCCAGTCTGTCC i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 109871 31 + 376347 AGAGAGTGAATCCAAACTCTCCAGCCTGTCC i aotNan1.NW_018514293v1 C 0 I 3 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e cebCap1.NW_016107703v1 520446 987 - 2125214 I a score=78161.000000 s hg38.chr7_KI270899v1_alt 148167 13 + 190869 TAAGAAGACATTA s panTro5.chr7_NW_015973580v1_random 22470 13 - 83720 TAAGAAGACATTA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538301 13 + 162613886 TAAGAAGACATTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109705 13 - 432965 TAAGAAGACATTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170002 13 + 85365473 TAAGAAGACATTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016062 13 + 185818997 TAAGAAGACATTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33632029 13 + 192294377 TAAGAAGACATTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399246 13 - 9440265 TAAGAAGACATTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987268 13 - 21915920 TAAGACGACATTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 122834 13 - 21531802 TAAGAAGACATTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155469 13 - 2515279 TAAGAAGACATTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313112 13 + 6586416 TAAGAAGACATTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 42513 5 + 138751 ------AACAT-- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 357910 7 - 2409723 ------AACATTA i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e aotNan1.NW_018514293v1 109902 3 + 376347 I e cebCap1.NW_016107703v1 520446 987 - 2125214 I a score=8281.000000 s hg38.chr7_KI270899v1_alt 148180 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 22483 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538314 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109718 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170015 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016075 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33632042 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399259 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987281 1 - 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 122847 1 - 21531802 A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155482 1 - 2515279 A i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313125 1 + 6586416 A i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 357917 1 - 2409723 A i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 109905 1 + 376347 A i aotNan1.NW_018514293v1 I 3 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e cebCap1.NW_016107703v1 520446 987 - 2125214 I e calJac3.chrUn_GL286444 42518 0 + 138751 C a score=317107.000000 s hg38.chr7_KI270899v1_alt 148181 34 + 190869 TTGGAGCAGGCATGGAACCTTCAGCTTTCCCAGT s panTro5.chr7_NW_015973580v1_random 22484 34 - 83720 TTGGAGCAGGCATGGAACCTTCAGCTTTCCCAGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538315 34 + 162613886 TTGGAGCAGGCATGGAACCTTCAGCTTTCCCAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109719 34 - 432965 TTGGAGCAGGCATGGAACCTTCAGCTTTCCCAGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170016 34 + 85365473 TTGGAGCAGGCTTGGACCCTTCGGCTTTCCCAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016076 33 + 185818997 TTGGAGCAGGCGTGGAACCTTCAGCTCTCCCA-T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33632043 33 + 192294377 TTGGAGCAGGCGTGGAACCTTCAGCTCTCCCA-T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399260 33 - 9440265 TTGGAGCAGGCGTGGAACCTTCAGCTCTCCCA-T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987282 33 - 21915920 TTGGAGCAGGCGTGGAACCTTCAGCTCTCCCA-T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 122848 33 - 21531802 TTGGAGCAGGCGTGGAACCTTCAGCTCTCCTG-T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155483 33 - 2515279 TTGGAGCAGGCGTGGAACCTTCAGCTCTCCCA-T i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313126 33 + 6586416 TTGGAGCAGGCGTGGAACCTTCAGCTCTCCCG-T i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 42518 33 + 138751 -TGGAGCAGGTGTGGAACCTTCAGCTTTCCCAGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 357918 34 - 2409723 ATGGAGCAGACCTGGAACCTTCAGCTTTCCCAGT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 521433 34 - 2125214 TTGGAGCAGGCATGGAACCTTCAGCTTTCCCAGT i cebCap1.NW_016107703v1 I 987 I 23 s aotNan1.NW_018514293v1 109906 34 + 376347 TTGGAGCAGGCATGGAACCTTCAGCTTTCCCAGT i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I a score=408702.000000 s hg38.chr7_KI270899v1_alt 148215 61 + 190869 CACCTGCCGGGTTACTTGGCTTAACCTGGGAATTAACCAGTTAATAAGGTTGTTGAAATGG s panTro5.chr7_NW_015973580v1_random 22518 61 - 83720 CTCCTGCCAGGTTACTTGGCTTAACCTGGGAATTAACCAGTTAATAAGGTTGTTGAAATGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538349 61 + 162613886 CTCCTGCCGGGTTACTTGGCTTAACCTGGGAATTAACCAGTTAATAAGGTTGTTGAAATGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109753 61 - 432965 CACCTGCCAGGTTACTTGGCTTAACCTGGGAATTAACCAGTTAATAAAGTCGTTGAAATGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170050 61 + 85365473 CACCTGCCGGATTACTTGGCTTAACCTGGGAATTAACCAGTTAATAAGGTCGTTGAAATGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016109 61 + 185818997 CACCTGCCGGGTTACTTGGCTTAACCTGGGAATTAGCCAGTTAATAAGGCCGTTGAAATGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33632076 61 + 192294377 CACCTGCCGGGTTACTTGGCTTAACCTGGGAATTAGCCAGTTAATAAGGCCGTTGAAATGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399293 61 - 9440265 CACCTGCCGGGTTACTTGGCTTAACCTGGGAATTAGCCAGTTAATAAGGCCGTTGAAGTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987315 61 - 21915920 CACCTGCCGGGTTACTTGGCTTAACCTGGGAATTAGCCAGTTAATAAGGCCGTTGAAATGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 122881 61 - 21531802 CACCTGCCGGGTTACTTGGCTTAACCTGGGAATTAACCAGTTAATAAGGCCTTTGAAATGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155516 61 - 2515279 CACCTGCCGGGTTACTTGGCTTAGCCTGGGAATTAGCCAGTTAATAAGGCCGTTGAAATGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313159 61 + 6586416 CACCTGCCGGGTTACTTGGCTTAACCTGGGAATTCACCAGTTAATAAGGCCGTTGAAATGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 42551 31 + 138751 ------------------------------CACTAACCAATTAATAAGGCTGTTGAAATGG i calJac3.chrUn_GL286444 C 0 I 3 s saiBol1.JH378296 357952 31 - 2409723 ------------------------------CACTAACCAGTTAATAAGGCCGTTGAAACGG i saiBol1.JH378296 C 0 I 3 s aotNan1.NW_018514293v1 109940 31 + 376347 ------------------------------CACTAACCAGTTAATAAGGCCGTTGGAATGG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e cebCap1.NW_016107703v1 521467 23 - 2125214 I a score=-12614.000000 s hg38.chr7_KI270899v1_alt 148276 3 + 190869 A--------------------------------------------------------------------AA s panTro5.chr7_NW_015973580v1_random 22579 71 - 83720 AAAGAATCCAGGAGGCTGCAGTGTGAGGCTGATTTGCTGTTTTTATTAAGTGAGGAAATGAGAAATGGGAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538410 3 + 162613886 A--------------------------------------------------------------------AA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109814 3 - 432965 A--------------------------------------------------------------------AA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170111 3 + 85365473 A--------------------------------------------------------------------AA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016170 3 + 185818997 G--------------------------------------------------------------------AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33632137 3 + 192294377 G--------------------------------------------------------------------AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399354 3 - 9440265 G--------------------------------------------------------------------AA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987376 3 - 21915920 G--------------------------------------------------------------------AA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 122942 3 - 21531802 G--------------------------------------------------------------------AA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155577 3 - 2515279 G--------------------------------------------------------------------AA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313220 3 + 6586416 G--------------------------------------------------------------------AA i colAng1.NW_012117710v1 C 0 C 0 s aotNan1.NW_018514293v1 109971 3 + 376347 G--------------------------------------------------------------------AA i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e saiBol1.JH378296 357983 3 - 2409723 I e cebCap1.NW_016107703v1 521467 23 - 2125214 I e calJac3.chrUn_GL286444 42582 3 + 138751 I a score=69605.000000 s hg38.chr7_KI270899v1_alt 148279 16 + 190869 GAATCCAGGAGGCTGC s panTro5.chr7_NW_015973580v1_random 22650 16 - 83720 GAATCCAGGAGGCTGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538413 16 + 162613886 GAATCCAGGAGGCTGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109817 16 - 432965 GAATCCAGGAGGCTGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170114 16 + 85365473 GAATCCAGGAGGCTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016173 14 + 185818997 GAA--CAGGAGGCTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33632140 14 + 192294377 GAA--CAGGAGGCTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399357 14 - 9440265 GAA--CAGGAGGCTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987379 14 - 21915920 GAA--CAGGAGGCTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 122945 3 - 21531802 GAA------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155580 14 - 2515279 GAA--CAGGAGGCTGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313223 3 + 6586416 GAA------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 42585 16 + 138751 GAATCCAGGAACCTGC i calJac3.chrUn_GL286444 I 3 C 0 s saiBol1.JH378296 357986 16 - 2409723 GAATCCAGGAACCTGC i saiBol1.JH378296 I 3 C 0 s aotNan1.NW_018514293v1 109974 16 + 376347 GAATCCAGGAACCTGC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e cebCap1.NW_016107703v1 521467 23 - 2125214 I a score=49182.000000 s hg38.chr7_KI270899v1_alt 148295 19 + 190869 AGTGTGAGGCTGATTTGCT s panTro5.chr7_NW_015973580v1_random 22666 19 - 83720 AGTGTGAGGCTGATTTGCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538429 19 + 162613886 AGTGTGAGGCTGATTTGCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109833 19 - 432965 AGTGTGAGGCTGATTTGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170130 19 + 85365473 TGTGTGAGGCTGATTTGCT i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 42601 19 + 138751 AGTGTGAGGCTGATTTGCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 358002 19 - 2409723 AGTGTGAGGCTGATTTGCT i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 109990 19 + 376347 AGTGTGAGGCTGATTTGCT i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 313226 0 + 6586416 C e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e chlSab2.chr28 122948 0 - 21531802 C e manLeu1.NW_012101810v1 155594 0 - 2515279 C e cerAty1.NW_012002954v1 16987393 0 - 21915920 C e macNem1.NW_012019910v1 4399371 0 - 9440265 C e macFas5.chr3 33632154 0 + 192294377 C e rheMac8.chr3 34016187 0 + 185818997 C e cebCap1.NW_016107703v1 521467 23 - 2125214 I a score=16677.000000 s hg38.chr7_KI270899v1_alt 148314 23 + 190869 GTCTTTATTAAGTGAGGAAATGA s panTro5.chr7_NW_015973580v1_random 22685 23 - 83720 GTCTTTATTAAGTGAGGAAATGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538448 22 + 162613886 GT-TTTATTAAGTGAGGAAATGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109852 23 - 432965 GTCTTTATTAAGTGAGGAAATGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170149 2 + 85365473 GT--------------------- i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 42620 23 + 138751 GTCTTTTTCAAGTGAAAAAACAA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 358021 23 - 2409723 GTTTTATTCAAGTGAGAAAACAA i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 313226 0 + 6586416 C e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e chlSab2.chr28 122948 0 - 21531802 C e manLeu1.NW_012101810v1 155594 0 - 2515279 C e cerAty1.NW_012002954v1 16987393 0 - 21915920 C e macNem1.NW_012019910v1 4399371 0 - 9440265 C e macFas5.chr3 33632154 0 + 192294377 C e rheMac8.chr3 34016187 0 + 185818997 C e aotNan1.NW_018514293v1 110009 0 + 376347 C e cebCap1.NW_016107703v1 521467 23 - 2125214 I a score=5507.000000 s hg38.chr7_KI270899v1_alt 148337 4 + 190869 GAAA s panTro5.chr7_NW_015973580v1_random 22708 4 - 83720 GAAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538470 4 + 162613886 GAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109875 4 - 432965 GAAA i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 42643 4 + 138751 TAAA i calJac3.chrUn_GL286444 C 0 T 65 s saiBol1.JH378296 358044 4 - 2409723 CAAA i saiBol1.JH378296 C 0 T 65 s cebCap1.NW_016107703v1 521490 4 - 2125214 GAAA i cebCap1.NW_016107703v1 I 23 C 0 e colAng1.NW_012117710v1 313226 0 + 6586416 C e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e chlSab2.chr28 122948 0 - 21531802 C e manLeu1.NW_012101810v1 155594 0 - 2515279 C e cerAty1.NW_012002954v1 16987393 0 - 21915920 C e macNem1.NW_012019910v1 4399371 0 - 9440265 C e macFas5.chr3 33632154 0 + 192294377 C e rheMac8.chr3 34016187 0 + 185818997 C e aotNan1.NW_018514293v1 110009 0 + 376347 C e nomLeu3.chr20 170151 0 + 85365473 C a score=2910.000000 s hg38.chr7_KI270899v1_alt 148341 3 + 190869 TGG s panTro5.chr7_NW_015973580v1_random 22712 3 - 83720 TGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538474 3 + 162613886 TGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109879 3 - 432965 TGG i gorGor5.CYUI01015914v1 C 0 C 0 s cebCap1.NW_016107703v1 521494 3 - 2125214 TGG i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 313226 0 + 6586416 C e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e chlSab2.chr28 122948 0 - 21531802 C e manLeu1.NW_012101810v1 155594 0 - 2515279 C e cerAty1.NW_012002954v1 16987393 0 - 21915920 C e macNem1.NW_012019910v1 4399371 0 - 9440265 C e macFas5.chr3 33632154 0 + 192294377 C e rheMac8.chr3 34016187 0 + 185818997 C e aotNan1.NW_018514293v1 110009 0 + 376347 C e saiBol1.JH378296 358048 65 - 2409723 T e calJac3.chrUn_GL286444 42647 65 + 138751 T e nomLeu3.chr20 170151 0 + 85365473 C a score=536229.000000 s hg38.chr7_KI270899v1_alt 148344 193 + 190869 GAAGAATCCAGGAGGCTGCAGTGTGAGGCTGATTTGCTGTCTTTATTAAGTGAGGAAACGACAGCAAAGCACTTCTAGGC-TTCTCACAGCTGAGCACACGAAGACTAAGCCCTCTTCCCGCCGTAGCCAGTGAGGAGAGGATCCCTCTTCCCAAG-CCCCC--------------TCAAGCAGTGGCTCCCGCTCACTGGAGGCTGGA s panTro5.chr7_NW_015973580v1_random 22715 193 - 83720 GAAGAATCCAGGAGGCTGCAGCGTGAGGCTGATTTGCTGTCTTTATTAAGTGAGGAAACGACAGCAAAGCACTTCTGGGC-TTCTCACAGCTGAGCACACGAAGACTAAGCCCTCTTCCCGCCGTAGCCAGTGAGGAGAGGACCCCTCTTCCCAAG-CCCCC--------------TCAGGCAGTGGCTCCCGCTCACTGGAGGCTGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538477 193 + 162613886 GAAGAATCCAGGAGGCTGCAGCGTGAGGCTGATTTGCTGTCTTTATTAAGTGAGGAAACGACAGCAAAGCACTTCTGGGC-TTCTCACAGCTGAGCACACGAAGACTAAGCCCTCTTCCCGCCGTAGCCAGTGAGGAGAGGACCCCTCTTCCCAAG-CCCCC--------------TCAGGCAGTGGCTCCTGCTCACTGGAGGCTGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 109882 193 - 432965 GAAGAATCCAGGAGGCTGCAGTGTGAGGCTGATTTGCTGTCTTTATTAAGTGAGGAAACGACAGCAAAGCACTTCTAGGC-TTCTCACAGCTGAGCACACGAAGACTAAGCCCTCTTCCTGCCGTAGCCAGTGAGGAGAGGACCCCTCTTCCCAAG-CCCCC--------------TCAGGCAGTGGCTCCCGCTCACTGGAAGCTGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170151 153 + 85365473 ----------------------------------------CTTTATTATGTGAGGAAACGACAGCAAAGCGTGTCTAGGC-TTCTCTCAGCTGAGCACACCAAGACCAAGCCCTCTTCCCGCCGTAGCCAGTGAGGAGAGGACCCCTCTTCCCAAG-CCCCC--------------TCAGGCAGTGGCTCCCGCTCACCGGCGGCTGGA i nomLeu3.chr20 C 0 C 0 s chlSab2.chr28 122948 185 - 21531802 --------CAGGAGGCTGCAGTGTGAGGCTGATTTTCCGTCTTTGTTAAGTGAGAAAATGACAGCAAAGCGTGTCTAGGC-TTCTCACGGCTGAGCACACGAAGACTAAGGCCTCTTCCCGCTGTAGCCAGTGAGGGGAGGACCCCAGATCCCAGG-CCCCC--------------TCAGGCAGTGGCTCCCGCTCACCGGCGGCTGGA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 313226 181 + 6586416 --------CAGGAGGCTGCAGTGTGAGGCTGATTTGCCGTCTTTATTAAGTGAGAAAATGACAGCAAAGCGTGTCTAGGC-TTCTCACGGCTGAGCACACGAAGACCAAGCCCTCTTCCCGCCGTAGCCAGTGAGGGGAGGACCCCTGTTCCCAGGCCCCCC--------------TCAGGCAGTGGTTCCCGCTCACCGGCTG----- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 42582 203 + 138751 GAAGAATCCAGGAACCTGCAGTGTGAGGCTGATTTGCTGTCTTTTTCAAGTGAAAAA---ACAATAAAGCATGTCTATGCTTTCTCATGGCTGTGCATGTGAAGACTGACCCCTCTTCCCATCGTTTCCAGTGAGAAGAGGCCCCCTTCTCCCAAC-TCCCCCCCCCCGCACCCCGCCAGGCAGTGGTTCC-ACTCACCGGCAGCTGA- i calJac3.chrUn_GL286444 T 65 C 0 s saiBol1.JH378296 357983 190 - 2409723 GAAGAATCCAGGAACCTGCAGTGTGAGGCTGATTTGCTGTTTTATTCAAGTGAGAAA---ACAACAAAGGATGTCTAGGCTTTCTCATGGCTGAGCATGTGAAGACTGACCTCTCTTCCCACCATTGCTGGTGAGAAGAGGCTCCCACTTCCCAAG-CTCCCC-------------CCAGGCAGTGGGTCT-GCTCACCGGTGGCTGA- i saiBol1.JH378296 T 65 C 0 s cebCap1.NW_016107703v1 521497 194 - 2125214 GAAGAATCCAGGTACCTGCAGTGTGAGGCTGATTTGCTGTCTTTTTCAAGTGAGAAA---ACAACAAAGCATGTCTAGGCTTTCTCATGGCTGCACATGTGAAGACTGACCCCTCTTCCCACCATCACCAGTGAGAAGAGGCCACCTCTTCCCAAG-CCCCCCCACC---------CCAGGCAGTGGGTCC-ACTCACCGGGGGCTGA- i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e manLeu1.NW_012101810v1 155594 0 - 2515279 C e cerAty1.NW_012002954v1 16987393 0 - 21915920 C e macNem1.NW_012019910v1 4399371 0 - 9440265 C e macFas5.chr3 33632154 0 + 192294377 C e rheMac8.chr3 34016187 0 + 185818997 C e aotNan1.NW_018514293v1 110009 0 + 376347 C a score=1060818.000000 s hg38.chr7_KI270899v1_alt 148537 272 + 190869 GTTTCTAGGGCTTGTCCCTGTCCAGAGCTGCTGCCTCAGGTGTGAGGGTGACTGCCCAGCCCCCGCGCCACAGGCCCTCCTCTCACCCGGACCTCAGGACCAGTTGGTAGGCCCCAGGCTTCCACCTTCAGGGGCATGGGGACGCTGGCCCCTGTGTCCGCCGAGGACGTCCTGGCTCCTTTTGGGGGTCTCTCCTGTCAGGACAGGTTCCGTGGGGTTGGAGGGACTCAGCCTGTTTCTGTGCCATCCGCCTTTAACGGCCCAGAAACGTT s panTro5.chr7_NW_015973580v1_random 22908 271 - 83720 GTTTCTAGGGCTTGTCCCTGTCCAGAGCTGCTGCCTCAGGTGTGAGGGTGACTGCCCAGCCCCC-TGCCACAGGCCCTCCTCTCACCTGGACCTCAGGACCAGTTGGTAGGCCCCAGGCTTCCACCTTCAGGGGCATGGGGACGCTGGCCCCTGTGTCCGCCGAGGCCCTCCTGGCTCCTGTTGGGGGTCTCTCCTGTCAGGACAGGTTCCGTGGGGTTGGAGGGACTCAGCCTGTTTCTCTGCCATCCCCCTTTAACGGCCCAGAAACGTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538670 271 + 162613886 GTTTCTAGGGCTTGTCCCTGTCCAGAGCTGCTGCCTCAGGTGTGAGGGTGACTGCCCAGCCCCC-TGCCACAGGCCCTCCTCTCACCCGGACCTCAGGACCAGTTGGTAGGCCCCAGGCTTCCACCTTCAGGGGCATGGGGACGCTGGCCCCTGTGTCCGCCGAGGCCCTCCTGGCTCCTGTTGGGGGTCTCTCCTGTCAGGACAGGTTCCGTGGGGTTGGAGGGACTCAGCCTGTTTCTCTGCCATCCCCCTTTAACGGCCCAGAAACGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 110075 266 - 432965 GTTTCTAGGGCTCGTCCCTGTCCAGAGCTGCTGCCTCAGATGTGAGGGTGACTGcccagcccccgcgccacaggccctc------cccagacctcaggaccagttggtaggccccaggcTTCCACCTTCAGGGGCATGGGGACGCTGGCCCCTGTGTCTGCCGAGGCCCTCCTGGCTCCTGTTGGGGGTCTCTCCTGTCAGGATAGGTTCCGTGGGGTTGGAGGGACTCAGCCTGTTTCTCTGCCATCCCCCTTTAACGGCCCAGAAACTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170304 272 + 85365473 GTTTCAAGGGCTTGCCCCTGTCTGGAGGTGCTGCCTCAGGTGTGAGGGTGACTGCCCAGCCCCCGTGCCACAGGCCCTCCTCTCGCCCAGACCTCAGGACCCGTTGGTAGGCCCCAGGCTTCCAGCTGCAGGGGTATGGGGACGCCGGCCCCTGTGTCCGCCGAGGCCCTCCTGGCTCCTGTTGGGGGTCTCTCCTGTCAGGATAGGTTCCGTGGGGTTGGAGGGACTCAGCCTATTTCTCTGCCATCCCCCTTTAACGGCCCAGAAACTTT i nomLeu3.chr20 C 0 C 0 s chlSab2.chr28 123133 267 - 21531802 GTTTCTAGGGCTTGCCCC-GTCCAGAGCTGC-GCCTCAGGTGTGAGGGTGACTGCCCAGCCCCCGTGCC-CAGGCCCTCCTCTCCCCCGGCCCTCAGGGCCGGTTGGTAGGTCCCAGGCTTCCAGCAGCAGGGGCCTGGGGACGCCGGGCCCTGTGTGCGCAGAGGCCCCCC-GGCTCCTGATGGAGGTCTCTCCTGTCAGGACAGGTTCCGAGGGGTTGGAGGGACTCAGCCTGTTTCTCTGCCA-ACCCCTTTAACGGCCCAGAAACTTC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 313407 253 + 6586416 -------------------GTCCAGAGCTGCTGCCTCAGGTGTGAGGGTGACTGCCCAGCCCCCGTGCCACAGGCCCTCCTCTCGCCCGGACCTCAGGGCCAGTTGGTAGGTCCCAGGCTTCCAGCTGCAGGGGCATGGGGACGCTGGGCCCTGTGTCTGCAGACGCCCCCCTGGCTCCTGTTGGAGGTCTCTCCTGTCAGGACAGGTTCCGTGGGGTTGGAGGGACTCAGCCTGTTTCTCTGCCATCCCCCTTTGACGGCCCAGAAACTTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 42785 264 + 138751 GTTTCTAAGGCTTGCCCCTGTCCAGAGCTGCTGCCTTAGGTGTGAGGGCAACTGCCCAGCCCCTGTGCCACCAGCCCTCCTCTCACCCAGACCTCGGGACCGGATGGT----CCCAGGCTTCCAGCTGCAGGGACATGGGGACAACA---CCCATGTCCACTGAGGCTCTCATAGCT-CTGTTGAAGGTCCCTTCTGTCAGGATAGGTGCCGGGGGGTTGAAGGGACTCATCCTATTTCTCTGCCATCTCCTTTTAACGGCCCAGAAACTTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 358173 264 - 2409723 GTTCCTAGGGCTTGCCCCTGTCCAGAGCTGCTGCCTCAGGTGTGAGGGCGACTGCCCAGGTCCTGTGCCACCGGCCCTCCTCTCAGCCAGACCTTGGGACCAGATGGT----CCCAGGCTTCCAGCTGCAGGGACAT-GGGACAACA---CCCGTGTCCACTGAGGCCCTCATGGATCCTGTTGGAGGTCTCTTCTGTCAGGATAGGTGCCGGGGGGTTGAAGGGACTCATCCTATTTCTCTGCCATCCCCTTTTAACAGCCCAGAAACTTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 521691 265 - 2125214 GTTTCTAGGGCTTGCCCCTGTCCAGAGCTGCTGCCTCAGGTGTGAGGGCGACTGCCCAGCCCCTGTGCCACTGGTCCTCCTCTCACCCAGACCTCAAGACCAGATGGT----CCCAGGCTTCCAGCTGCAGGGCCATGGAGACAACA---CCCGTGTCCACTGAGGCCCTCATGACTCCTGTTGGAGGTCTCTTCTGTCAGAATAGGTGCCAGGGGGTTGAAGGGACTCATCCTTTTTCTCTGCCATCCCCTTTTAATGGCCCAGAAACTTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 110009 262 + 376347 GTTTCTAGGGCTTGCCC--GTCCAGAGCTGCTGCCTCAGGTGTGAGGGCGACTGCCCAGCCCCTGTGCCACCAGCCGTCCTCTTACCCAGACCTCAGGACCAGATGGT----CCCAGGCTTCCAGCTGCAGGG-TATGGGGACGCCA---CCCATGTGCACCAAGGCCCTCATGGCTCCTCCTGAAGGTCTCTTCTGTCAGGATAGGTGCTGGAGGGTTGAAGGGACTCATCCTGTTTCTCTGCCATCCCCTTTTCACGACCCGGAAACTTC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I e manLeu1.NW_012101810v1 155594 0 - 2515279 C e cerAty1.NW_012002954v1 16987393 0 - 21915920 C e macNem1.NW_012019910v1 4399371 0 - 9440265 C e macFas5.chr3 33632154 0 + 192294377 C e rheMac8.chr3 34016187 0 + 185818997 C a score=139048.000000 s hg38.chr7_KI270899v1_alt 148809 14 + 190869 AGTGACTGAGAGTA s panTro5.chr7_NW_015973580v1_random 23179 14 - 83720 AGTGACTGAGAGTA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538941 14 + 162613886 AGTGACTGAGAGTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 110341 14 - 432965 AGTGACTGAGAGTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170576 12 + 85365473 AGTGACT--GAATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016187 14 + 185818997 AGTGACTGAGAGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33632154 14 + 192294377 AGTGACTGAGAGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399371 14 - 9440265 AGTGACTGAGAGTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16987393 14 - 21915920 AGTGACTGAGAGTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 123400 14 - 21531802 AGTGACTGAGAGTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 155594 14 - 2515279 AGTGACTGAGAGTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 313660 14 + 6586416 AGTGACTGAGAGTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 43049 14 + 138751 AGTGACTGAGAGTA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 358437 14 - 2409723 AGCTACTAAGAGTA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 521956 14 - 2125214 AGTGACTGAGAGTA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 110271 14 + 376347 AGTGACTGGGAGTA i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e canFam3.chr6 61040219 14 - 77573801 I a score=7423257.000000 s hg38.chr7_KI270899v1_alt 148823 841 + 190869 AAATAAGGTCG--ACTTCACAGTTTCTTTCTCCTCAGCAGTGTCT-GGGGGCTGGTCCT--CAGCCATGACCGCCGGCCCTGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGTCATCCTGGGCGGCCCTGCTCCATCTGTACCCTct----gccctgcc---ctggtcctggacctgctccgctctgca-ttgcgctC-TGCGGGACCTGAGAGGTTTCT-CAGCAGGAGCTGAATAGTGTTGAAAAGGCTTCCAGCCCGCACCTCAGTGGGGCACTTTTCTTCATGGGACATGCGGGGTTGTCTGGGCTGGAGAACACAGATTTGGGGGCACTCCGGAAGGTGGCAGAAGGTTGG---------------------CCCTACACGGGACCCAGT------------GGTCATCTCTGCAAATGCCGGGGCTGGGCTGTTC-CTGCCTCAGAGGCCTCCCTCCTCCAGAGCAGGGGTGGAGAAATCAGCCTGG-AGAGCCTCACGGCGCAGGAGGGATTTGCCGGGGCTGCCTCTGCATAGAG-CCCCCTGCAA---ACAGAGGAGCTGTTTTATAGCACTGGATTTAGCTTGCAGGGTCCTGGAACACCTAGAGACACCAGAGGGGGA-GACCGCAGATGAAGACCTCCTGGACGGCCGGGCAACCAGTGGCAGTCC-CACGAGCCACGGGGCCGTGGCCAGCCTCCTTTCGGGA--------------------------CACAGTCCAGCCTGGAGGGAAG-GAGGGGACAGGGGACCTTTCTGATTCTTC-TTTTTCCTTTTCCTTTGGAATGAGAAAACAGCCTCTACGTTCTCCCATTCACGTCT-GTCATCAGCTGAAGGAGCTCTTCCCCTTTTCCCCACTGACTCTGCACCCTCCACGGGGA s panTro5.chr7_NW_015973580v1_random 23193 836 - 83720 AAATAAGGTCG--ACTTCACAGTTTCTTTGTCCTCAGCAGTGTCT-GGGGGCTGGTCCT--CAACCATGACCGCCGGCCCTAGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGTCATC-----CGGCCCTGCCCCATCTGTACCCTct----gccctgcc---ctggtcctggacctgctccACTCCGCA-TTGCGCTC-TGCGGGAGCTGAGAGGTTTCT-CAGCAGGAGCTGAATAGTGTTGAAAAGGCTTCCAGCCCGCACCTCAGTGGGGCACTTTCCTTCATGGGACATGCGGGGTTGTCTGGGCTGGAGAACACAGATCTGGGGGCACTCTGGAAGGTGGCAGAAGGTTGG---------------------CCGTACACGGGACCCAGT------------GGTCATCTCTGCAAATGCCGGGGCTGGGCTGTTC-CTGCCTCAGAGGCCTCCCTCCTGCAGAGCAGGGGTGGAGAAATCAGCCTGG-AGAGCCTCACGGCGCAGGAGGGATTTGCCGGGGCTGCCTCTGAATAGAG-CCCCCTGCAA---ACACTGGAGCTGTTTTATGGCACTGGATTTAGCTTGCAGGGTCCAGGAACACCTAGAGACACCAGAGGGGGA-GACCGCAGATGAAGACGTCCTGGGCGGCCAGGCAACCAGTGGCAGTCC-CACGAGCCACGGGGCCGTGGCCAGCCTCCTTTTGGGA--------------------------CACAGTCCAGCCTGGAGGGAGG-GAGGGGACAGGGGACCTTTCTGATTCTTC-TTTTTCCTTTTCCTTTGGAATGAGAAAACAGCCTCTACGTTCTCCCATTCACATCC-GTCATCAGCTGAAGGAGCTCTTCCCCTCTTCCCCACTGACTCTGCACCCTCCACAGGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 538955 841 + 162613886 AAATAAGGTCG--ACTTCACAGTTTCTTTGTCCTCAGCAGTGTCT-GGGGGCTGGTCCT--CAACCATGACCGCCGGCCCTAGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGTCATCCTGGGCGGCCCTGCCCCATCTGTACCCTCT----GCCCTGCC---CTGGTCCTGGACCTGCTCCACTCCGCA-TTGCGCTC-TGCAGGAGCTGAGAGGTTTCT-CAGCAGGAGCTGAATAGTGTTGAAAAGGCTTCCAGCCCGCACCTCAGTGGGGCACTTTCCTTCATGGGACATGCGGGGTTGTCTGGGCTGGAGAACACAGATCTGGGGGCACTCCGGAAGGTGGCAGAAGGTTGG---------------------CCGTACACGGGACCCAGT------------GGTCATCTCTGCAAATGCCGGGGCTGGGCTGTTC-CTGCCTCAGAGGCCTCCCTCCTGCAGAGCAGGGGTGGAGAAATCAGCCTGG-AGAGCCTCACGGCGCAGGAGGGATTTGCCGGGGCTGCCTCTGAATAGAG-CCCCCTGCAA---ACACTGGAGCTGTTTTATGGCACTGGATTTAGCTTGCAGGGTCCAGGAACACCTAGAGACACCAGAGGGGGA-GACCGCAGATGAAGACCTCCTGGACGGCCAGGCAACCAGTGGCAGTCC-CACGAGCCACGGGGCCGTGGCCAGCCTCCTTTCGGGA--------------------------CACAGTCCAGCCTGGAGGGAGG-GAGGGGACAGGGGACCTTTCTGATTCTTC-TTTTTCCTTTTCCTTTGGAATGAGAAAACAGCCTCTACGTTCTCCCATTCACGTCT-GTCATCAGCTGAAGGAGCTCTTCCCCTCTTCCCCACTGACTCTGCACCCTCCACAGGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 110355 838 - 432965 AAATAAGGTCG--ACTTCACAGTTTCTTTCTCCTCAGCAGTGTCT-GGGGGCTGGTCCT--CAACCATGACCGCCGGCCCTGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGTCATC-TGGGCGGCCCTGCCCCATCTGTACCctct----gccctgcc---ctggtcctggacctgctctgctccgca-ttgcactC-TGCGGGACCTGAGAGGTTTCT-CAGCGGGAGCTGAACAGTGTTGAAAAGGCTTCCAGCCTGCACCTCAGTGGGGTGCTTTTTTTCATGGGACATGCGGGGTTGTCTGGGCTGGAGAACACAGATTTGGGGGCACTCCGGAAGGTGGCAGAAGGTTGG---------------------CCGTACACGGGACCCAGT------------GGTCATCTCTGCAAATGCCTGGGCTGGGCTGTTC-CTGCCTCAGAGGCCTCCCTCCTGCAGAGCAGGGGTGGAGAAATCAGCCTGG-AGAGCCTCACGGCGCAGGAGGGATTTGCCAGAGCTGCCTCTGAATAGAG-CCCCCTGCAA---ACACTGGAGCTGTTTTATGGCACTGGATTTAGCTTGCAGGGTCCAGGAACACCTAGAGACACCAGAGGGAGA-GACCGCAGATGAAGACCTCCTGGACGGCCGGGCAACCAGTGGCAGTCC-CACGAGCCACGGGGCCATGGCCAGCCTCCTTTTGGGA--------------------------CACAGTCCAGCTTGGAGGGAGG-GAGGGGACAGGGGACCTTTCTGATTCTTC-TTTTTCCTTTTCCTTTGGAATGAGAAAACAGCCTCTACGTTCT--CATTCACGTCC-GCCATCCGCTGAAGGAGCTCTTCCCCTCTTCCCCACTGACTCTGCACCCTCCACAGGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 170588 831 + 85365473 AATTAAGGTCG--ACTTCACAGTTCCTTTCTCCTC-GCAGTCTCT-GGGGACTGGTCCTCACAACCGTGACCGCCGGCCCTGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGTCATCCTGGGTGgccctgccccatctctaccctct----gccctgcc---ctggtcct-gacctgctctgctctgcg-ctgtgctc-tgcGGGATCTGAGAGGTTTCTGCAGCAGGAGCTGAACAGTGTTGAACAGGCTTCCAGCCCGCACCTCAGTGGGGCGCTTTTTTTCACGGGACATGTGGGGTTGTCTGGGCTGGAGGACACGGATTTGGGGGCACTCCTGAAGGTGGCAGAAGGTTGG---------------------CCCCACACGGGACCCAGT------------GGTCATCTCTGCAAATGCCTGGGCTGGGCTGTTC-CTGCCTCAGAGGCCTCCTTCCC-CAGAGCAGAGGTGGAGAAAGCAGCCTGGAAGAGCTTCACGGCGCAGGAGGGATTTGCTGGAGCTGCCTCTGCACAGAG-CCCCCTGCAG---ACACAGGAGCTGTTTTATGGCGGTGGATTTGGCTTGCAGGGTCCTGGAACGCCTAGAGACACCAGGGGGGGA-GAACACAGAT------CTCCCGGGTGGCTGGGC-ACCAGTGGCAGTCC-CAGGAGCCACGGGGCCGTGGCCAGCCTCCTTTTGGGA--------------------------CACGGTCGGGCCTGGAG----G-GAGGGGACAGGGGACCTTTCTGATTCTTC-TTTTTCCTTTTCCTTTGAAATGAGAAAACAGCCTCTACGGGCTCCCATTCACGTTG-GTCATCAGCTGAAGGAGCTCTTCCCCTCTTCCCCTCTGACTCTGCACCCTCCACAGGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34016201 836 + 185818997 AAATACAGTCG--ACGTCACAGTTTCTTTCTCCTCAGCATTCTCT-GGGGGCTGGTCCT--CAACCGTGGCCACCGGCCCTGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGCCATCCAGGGCGGCCGTGGCCCGTCTGTACCCTCC----GCCCTGCC---CTGGTCCCGGACCTTTTCTGCTCCGCA-CTGCGCAT-CGCCAGACCTGAGAGGTTTCTGTAGCAGGAGCTGGACAGTGTTGAACAGGCTTCCAGCCCACACCTCGGTGGGGCACTTTTTTTCATGGGACGTGTGGGGTTGTCTGGGCTGGAGGACGTGGATTT-GGGGCACTCCTGAAGGTGGCAGAAGGTTGG---------------------CCCTACACAGGACCCAGT------------GGTCACCTCTGCAAACGCCTGGGCTGGGCTGTTCGCTGCCTCAGAGGCCTCCCTCCCCCGGAACAGAGGTGGCGAAATCAGCCTGG-AGAGCCTCACGGTGCAGGAGGGATTTGCCGGAGCTGTCTCTGAATAGAG-CCCCCTGCAA---ACACAGGAGCTGTTTTCCGGGAGTGGATTTGGCTTGCAGGGTCCTAGAACACCTGCAGACGTCAGAGGGGGA-GACCGCAGATGAAGATATCCCGGAA-----GGCAACCAGTGGCCATCC-CACAAGCCAAGGGGCCGTGGCCAGCCTCCTTTTGGGA--------------------------CACAGTCGGGCCTGGAGGGAGG-GAGGGGACAGGGG-CCTTTCTGATTCTTC-TTTTACCTTTTCCCTTGGAATGAAAAAACAGCCTCTACAGGCTCCCATTCGCGTCC-CTCAGCAGCTGAAGGAGCGCTTCGCCTCTTCCCCACCGACTCTGCACCCTCCACAGGGA i rheMac8.chr3 C 0 I 9 s macFas5.chr3 33632168 836 + 192294377 AAATACAGTCG--ACGTCACAGTTTCTTTCTCCTCAGCATTCTCT-GGGGGCTGGTCCT--CAACCGTGGCCACCGGCCCTGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGCCATCCAGGGCGGCCGTGGCCCGTCTGTACCCTCC----GCCCTGCC---CTGGTCCCGGACCTTTTCTGCTCCGCA-CTGCGCTC-CGCCAGACCTGAGAGGTTTCTGTAGCAGGAGCTGGACAGTGTTGAACAGGCTTCCAGCCCACACCTCGGTGGGGCACTTTTTTTCATGGGACGTGTGGGGTTGTCTGGGCTGGAGGACATGGATTT-GGGGCACTCCTGAAGGTGGCAGAAGGTTGG---------------------CCCTACACAGGACCCAGT------------GGTCACCTCTGCAAACGCCTGGGCTGGGCTGTTCGCTGCCTCAGAGGCCTCCCTCCCCCGGAACAGAGGTGGCGAAATCAGCCTGG-AGAGCCTCACGGTGCAGGAGGGATTTGCCGGAGCTGTCTCTGAATAGAG-CCCCCTGCAA---ACACAGGAGCTGTTTTCCGGGAGTGGATTTGGCTTGCAGGGTCCTAGAACACCTGGAGACGTCAGAGGGGGA-GACCGCAGATGAAGATCTCCCGGAA-----GGCAACCAGTGGCCATCC-CACAAGCCAAGGGGCCGTGGCCAGCCTCCTTTTGGGA--------------------------CACAGTCGGGCCTGGAGGGAGG-GAGGGGACAGGGG-CCTTTCTGATTCTTC-TTTTACCTTTTCCCTTGGAATGAAAAAACAGCCTCTACAGGCTCCCATTCGCGTCC-CTCAGCAGCTGAAGGAGCGCTTCGCCTCTTCCCCACCGACTCTGCACCCTCCACAGGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4399385 836 - 9440265 AAATACAGTCG--ACGTCACAGTTTCTTTCTCCTCAGCATTCTCT-GGGGGCTGGTCCT--CAACCGTGGCCACCGGCCCTGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGCCATCCAGGGCGGCCGTGGCCCGTCTGTACCCTCC----GCCCTGCC---CTGGTCCCGGACCTTTTCCGCTCCGCA-CTGCGCTC-CGCCGGACCTGAGAGGTTTCTGTAGCAGGAGCTGGACAGTGTTGAACAGGCTTCCAGCCCGCACCTCGGTGGGGCGCTTTTTTTCATGGGACGTGTGGGGTTGTCTGGGCTGGAGGACGTGGATTT-GGGGTACTCCTGAAGGTGGCAGAAGGTTGG---------------------CCCTACACAGGACCCAGT------------GGTCACCTCTGCAAACGCCTGGGCTGGGCTGTTCGCTGCCTCAGAGGCCTCCCTCCCCCGGAACAGAGGTGGCGAAATCAGCCTGG-AGAGCCTCACGGTGCAGGAGGGATTTGCCGGAGCTGTCTCTGAATAGAG-CCCCCTGCAA---ACACAGGAGCTGTTTTCCGGGAGTGGATTTGGCTTGCAGGGTCCTAGAACACCTGGAGACGTCAGAGGGGGA-GACCGCAGATGAAGATCTCCCGGAA-----GGCAACCAGTGGCCATCC-CACAAGCCAAGGGGCCGTGGCCAGCCTCCTTTTGGGA--------------------------CACAGTCGGGCCTGGAGGGAGG-GAGGGGACAGGGG-CCTTTCTGATTCTTC-TTTTACCTTTTCCCTTGGAATGAAAAAACAGCCTCTACAGGCTCCCATTTGCGTCC-ATCAGCAGCTGAAGGAGCGCTTCGCCTCTTCCCCACCGACTCTGCACCCTCCACAGGGA i macNem1.NW_012019910v1 C 0 I 9 s cerAty1.NW_012002954v1 16987407 836 - 21915920 AAATACAGTCG--ACGTCACAGTTTCTTTCTCCTCAGCGTTCTCT-GGGGGCTGGTCCT--CAACCGTGGCCACCGGCCCTGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGCCATCCAGGGCGGCCGTGGCCCGTCTGTACCCTCC----GCCCTGCC---CTGGTCCCGGACCTGCTCCGCTCCGCA-CTGCGCTC-CGCCAGACCTGAGAGGTTTCTGTAGCAGGAGCTGGACAGTGTTGAACAGGCTTCCAGCCCGCACCTTGGTGGGGCGCTTTTTTTCATGGTTCGTGTGGGGTTGTCTGGGCTGGAGGACATGGATTT-GGGGCACTCCTGAAGGTGGCAGAAGGTTGG---------------------CCCTACACAGGACCCAGT------------GGTCACCTCTGCAAACGCCTGGGCTGGGCTGTTCGCTGCCTCAGAGGCCTCCCTCCCCTGGAACAGAGGTGGCGAAATCAGCCTGG-AGAGCCTCACGGTGCAGGAGGGATTTGCCGGAGCTGTCTCTGAATAGAG-CCCCCTGCAA---ACACAGGAGCTGTTTTCCGGGAGTGGATTTGGCTTGCAGGGCCCTAGAACACCTGGAGACGTCAGAGGGGGA-GACCGCAGATGAAGATCTCCCGGAA-----GGCAACAAGTGGCCATCC-CACAAGCCAAGGGGCCGTGGCCAGCCTCCTTTCGGGA--------------------------CACAGTAGGGCCTGGAGGGAGG-GAGGGGACAGGGG-CCTTTCTGATTCTTC-TTTTTCCTTTTCCCTTGGAATGAAAAAACAGCCTCTACAGGCTCCCATTCACATCC-ATCAGCAGCTGAAGGAGCACTTCGCCTCTTCCCCACCGACTCTGCACCCTCCACAGGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 123414 831 - 21531802 AAATACGGTCG--ACGT--CAGTTTCTTTCTCCTCAGCGTTCTCT-GGGGGCTGGTCCT--CAACGGTGGCCGCCGGCCCTGGTCTGTCATCATCCTGATAATTTTCTAGAACTCCACCTGCAGCCGCCATCCAGGGCGGCCCTGGCCCGTCTGTGCCCTCC----ACCCTGCT---CTGGTCCCGGACCTGCTCCGCTCCACA-CTGCGCTC-CGCGGGACCCGGGAGGTTTCTGTAGCA-GAGCTGGACAGTGTTGAACAGGCTTCCAGCCCGCACCTCGGTGGGGTGCTTTTTTTCATGGGACATGTGGGGTTGTCTGGGCTGGAGGACACGGATCT-GGGGCACTCCTGAAGGTGGCAGAAGGTTGG---------------------CCCTATGCAGGATCCAGT------------GGTCACCTCCGCAAATGCCTGGGCTGGGCTGTTCCCTGCCTCAGAGGCCTCCCTCCCCCGGAGCAGAGGTGGCGAAATCAGCCTGG-AGAGCCTCACGGCGCAGGAGGGACTTGTCGGAGCTGCCTCTGAATAGAG--CCCCTGCAA---ACACAGGAGCTGTTTTCCGGGAGTGGATTTGGCTTGCAGGGTCCTGGAACACCTGGAGACATCAGAGGGGGA-GACCGCAGATGAAGACCTCCCGGAA-----GGCAACCAGTGGCCGTCC-CACAAGCC-AGGGGCCGTGGCCAGCCTCCTTTTGGGA--------------------------CACAGTCGGGCCTGGAGGGAGG-GAGGGGACGGGGG-CCTTTCTGATTCTTC-TTTTTCCTTTTCCCTTGGAATGAAAAAACAGCCTCTACGGGCTCCCATGCACATCC-ATCAGCAGCTGCAGGAGCGCTTCGCCTCTTCCCCACCAACTCTGCACCCTCCACAGGGA i chlSab2.chr28 C 0 I 7 s manLeu1.NW_012101810v1 155608 836 - 2515279 AAATACAGTCG--ACGTCACAGTTTCTTTCTCCTCAGCATTCTCT-GGGGGCTGGTCCT--CAACCGTGGCCACCGGCCCTGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGCCATCCAGGGCGGCCGTGGCCCGTCTGTACCCTCC----ACCCTGCC---CTGGTCCCGGACCTGCTCCGCTCCGCA-CTGCGCTC-CGCCAGACCTGAGAGGTTTCTGTAGCAGGAGCTGGACAGTGTTGAACAGGCTTCCAGCCCGCACCTCGGTGGGGCGCTTTTCTTCGTGGGACGTGTGGGGTTGTCTGGGCTGGAGGACACGGATTT-GGGGCACTCCTGAAGGTGGCAGAAGGTTGG---------------------CCCTACACAGGACCCAGT------------GGTCACCTCTGCAAACGCCTGGGCTGGGCTGTTCGCTGCCTCAGAGGCCTCCCTCCCCCGGAACAGAGGTGGCGAAATCAGCCTGG-AGAGCCTCACGGTGCAGGAGGGATTTGCCGGAGCTGTCTCTGAATAGAG-CCCCCTGCAA---ACACAGGAGCTGTTTTCCAGGAGTGGATTTGGCTTGCAGGGTCCTAGAACACCTGGAGACGTCAGAGGGGGA-GACCGCAGATGAAGATCTCCCGGAA-----GGCAACCAGTGGCCATCC-CACAAGCCAAGGGGCCGTGGCCAGCCTCCTTTCGGGA--------------------------CACAGTCAGGCCTGGAGGGAGG-GAGGGGACAGGGG-GCTTTCTGATTCTTC-TTTTTCCTTTTCCCTTGGAATGAAAAAACAGCCTCTACAGGCTCCCATTCGCGTCC-ATCAGCAGCTGAAGGAGCGCTTCGCCTCTTCCCCACCGACTCTGCACCCTCCACAGGGA i manLeu1.NW_012101810v1 C 0 I 9 s colAng1.NW_012117710v1 313674 840 + 6586416 AAATACAGTCG--ACGTCACAGTTTCTTTCTCCTCAGCATTCTCT-GGGGGCTGGTCCT--CAACCGTGGCCGCCGGCCCCGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGCCATCCGGGGCGGCCCTGGCCCGTCTGTACCCTCC----GCCCTGCC---CTGGTCCCGGACCTGCTCCGCTCCGCA-CTGCAGTC-CACCGGACCTGAGAGGTTTCTGCAGCAGGAGCTGAACAGTGTTGAACAGGCTTCCGGCCCGCACCTCGGTGGGGCGCTTTTTTTCATGGGACGTGTGGGGTTGTCTGGGCTGGAGGACACGGATTT-GGGGCACTCCTGAAGGTGGCAGAAGGTTGG---------------------CCCTACGCAGGACCCAGT------------GGTCACCTCTGCAAATGCCTGGGCTGGGCTGTTCCCTGCCTCAGAGGCCTTCCTCCGCCAGAGCAGAGGTGGAGAAATCGGCCTGG-AGAGCCTCACGGCGCAGGAGGGTTTTCCCGGAGCTGCCTCTGAATAGAG-CCTCCTGCAA---ACACAGAAGCTGTTTTACGGGAGTGGATTTGGCTTGCAGGGTCCTAGAACACCTGGAGACATCAGAGGGGGA-GACCGCAGATGAAGACCTCCCGGAAGGCAGGGCAACCA--AGCCGTCC-CACAAGCCAAGGGGCCCTGGCCAGCCTCCTTTCGGGA--------------------------CACAGTCGGGCCTGGAGGGAGG-GAGGGGACAGGGGTTCTTTCTGATTCTTC-CTTTTCCTTTTCCCTTGGAAGGAGAAAACATCCTCTATGGGCTCCCATTCGCGTCC-ATCAGCAGCTGAAGGAGCTCTTCGCCTCTTCCCCACTGACTCTGCACCCTCCACGGGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 43063 780 + 138751 AAATAAGGTCA--ATATCACAGTTTCTTTCCCCTTGGCAGACTCT-GGGGGCTGGTCCT--CAACCGTGGCTGTCAGCCCTGGTCTGTCATCCTCCTGATAATTTTCTAGAACTCCACCTGCAGCTGCCATCCACGGCGGCCCTGCCCCACCTGCACCCTCT----GTCCTTCC---CAGG-----------CTCCACTCTGCA-CTGCGCTT-CACAGGACCAAAGAGATTTCCACAGCAGGAGCTGAGCAATGCTGAGCAGGCTGCCAGCCCACACCTCAATGGTGCACTTTCTTCATGGGGACAC---GGGTTGTCTGGGCTGGAGGACATGGGTTTGGGGCCACTCCTGAAAGTGGCAGAAGGTTGG---------------------CCCTATCCGGGACCCAGT------------GGTCACCTCTGCAAATGTCTGGG------------CTGCCCCAGAGGCCTCCCTCCTCCAGAGCAGAGGTGAAGA------------------------------AAGGATTTGGCCAAGCTGCCTCTGAATAGAGGCCCCCTGTGA---ACACAGGAGCTGTTTCATGGCAGTGGATTTAACTTGCAGGAACCC-GAACACCTAGAGAACTCAGATGGGGA-GACCATAAACGAAGACTTCTGGAGAAGCTGAGCAATGAGTGGCAGTCC-CACAAGCCAC-AGGCCATGGCCAGCCTCCTTTCAGGA--------------------------CATGGTTGTGCCTGGAGGAAAGAAAGGGTGCAGGGGACCTTTCTGATTCTCCTTTTTTCCTTTTCCCTTGGAATGAGAAAACAGCCTCGATGGGCTCCCGTTCACATTT-GTAATCAGC-AAAGGAG--------CTCTTCCCCACTGACTCTACCCCCTCCACAGGGA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 358451 822 - 2409723 AAATAAGGTCA--ACATCACCGTTTCTTTCCCCTTGGCAGACTCT-GGGGACCGGTCCT--CAACCGTGGCCGTCAGCCCCGGTCTGTCATCATCCTGATAATTTTCCAGAACCCCACCTGCAGCTGCCCTCCAGGGCGGCCCTGTCCCACCTGCACCCTCT----GTCCTTCC---CCGG-----------CTCCGCTCCACA-CTGTGCTC-CACAGGACCCAAGAGATTTCCGCAGCAGGAGCTGAGCAATACTGAGCAGGCTGCCAGCCCACACCTCGGTGGTGCGCTTTCTTCATGGGGACACGTGGGGTTGTCTGGGCTGGAGGACACGGGTTTAGGGACACGCCTGAAAGTGGCAGAAGGTTGG---------------------CCCTACCCGGGACCCAGT------------GGTCACCTCTGCAAATGTCTGGGCTGGGCTGTCCCCTGCCGCAGAAGCCTCCCTTCTCCAGAGCAGAGGTGGAGAAATCGGCCTTG-AGAGGTTCACAGTGCAGGAAGGATGTGGCCAAGCTACCTCTGAATAGAGGCCTCCTGTGA---ACGCAGGAGCTGTTTTATGGCGGCGGATTTAACTTGCAGGAACCC-GAACACCTAGAGAATTCAGATGGGGA-GACCATAGACTAAGACCTCTGGAGAGGCTGGGCAATGAGTGGCAGTCC-CATGAGCCAC-AGGCCGTGGCCAGCCTCCTTTCAGGA--------------------------CACGGTTGAGCCGTGAGGAAAG--AGGGGACAGGGGACCTTTCTGATTGTCCTTTTTTCCTTTTCCCTTGGAATGAGAAAACAGCCTCGATGGGCTCCTGTTCACATTC-ATGATCAGC-GCCTTCG--------CTCTTGCCCGCTGACTCTGCCCCCTCCTCAGGGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 521970 821 - 2125214 AAATAAGGTCA--ACATCACAGTTTCTTTCCCCTTGGCAGACTCT-GGGGGCCGGTCCT--CAACCGCGGCCATCAGCCCCGGTCTGTCATCATCCTGATAATTTTCCAGAACT-CACCTGCAGCTGCCAATCAGGGTGGCCCTGCCCCACCTGCACCCTCT----GTCCTTCC---CTGG-----------CTCCGCTCCGCA-CTGTGCTC-CACAGGACCCAAGAGATTTCCACAGCAGGAGCTGAGCAATGCTGAGCAGGCTGCCAGCCCACACCTCAGTGGTGCGCTTTCTTCATGGGGACACGTGGGGTTGTCTGGGCTGGAGGACATGGGTTCAGGGCCACTCCTGAGAGTGGCAGAAGGTTGG---------------------CCCTACCCGGGACCCAGT------------GGTCACCTCTGCAAATGTCTGGGCTGGGCTGTCACCTGCCCCAGAGTCCTCCCTCCTCCAGAGCAGAGGTGGAGAAATCAGCCTTG-AGAGGTTCACAGTGCAAGAAGGATTTGGCCAAGCTGCCTCTGAATAGAGGCATCCTGTGA---ACGCAGGAACTGTTTTATGGCAGTGGATTTAACTTGCAGGAACCC-GAACACCTAGAGAACTCTGATGGGGA-GACCATAGACAAAGACCTCTGGAGAGGCCGGGCAACAAGTGGCAGTCC-CATGAGCCAC-GGGCCGTGGCCAGCCTCCTTTCAGGA--------------------------CACGGTTGAGCCTGGAGAAAAG--AGGGGACAGGGGACCTTTCTGATTCTCCTTTTTTCCTTTTCCCTTGGAATGAGAAAACGGCCTCAATGGGCTCCTGTTCACATTC-ATAGTCAGT-GAAGGAG--------CTCTTTCCCGCTGACTCTGCCTCTTCCACAGCGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 110285 813 + 376347 AACTAAGGTCA--ATATCACAGTTTCTTTCTCCTCGGCAGACTCT-GGGGGCCGGTCCT--CAACCGTGGCCGCCAGCCCCGGTCTGTCATCATCCTGATAATTTTCCAGAACTCCACCTGCAGCCGCCATCCAGGGCGGCCCTGCCCCACCTGCACCCTCT----GTCCTTCC---CTGG-----------CTCCGCTCGGCA-CCGCGCTC-CGCAGGACCCGAGAGATTTCCACAGCAGGAGCTGAGCAGTGCTGAGCAGGCTGCCAGCCCACACCTCAGTGGTGCACTTTCTTCATGGGGACACGTGGGGTAGTCTGGGCTGGAGGACATGGGTTTGGGGCCACTCCTGAAAGTGGCAGAAGGTTGG---------------------CCCTACCCGGGACCCAGT------------GGTCACCTCTGCAAATGTCTGGGCTGGGCTGTCCCCTGCCCCAGAGGCCTCCCTCC-CCAGAGCAGAGGTGGAGAAATCAGCCTCG-AGAGGTTCACAGCACAGGAAGGATTTGGCCAAGCTGCCTCTGAATAGAGGCCCCCTGTGA---ACACAAGAGCTGTTTTATGGCAGTGGATTTACCTTGCAGGGACCC-GAACACCTAGAGAACTCAGATGGGGA-GACCATAGATGAAGACCTCTGGAGAGGCCGGGCAGCGAGTGGCAGTCC-CACGAGCCAC-GGGCCATGGCCAGCCTCCTTTCAGGA--------------------------CACGGTTGAGCCTGGAGGAAAG--AGGGGACAGGGGACCTTTCTGATT---CTTTTTTCCTTTTCCCTTGGAATGAGAAAACAGCCTCAGTGGGATCCCGCTCGCATTC-ATAATCAGC-GA---AG--------CTCTTCCCCACTGA--CTGCCCCCTCCACAGGGA i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61040233 821 - 77573801 AAATAAGGCGGACACATCACAGTCTCCTT---TTCAGCATCCTCTAGGAGGCTGGACCT--CTCCAGTGACCCCATGCTT---TCCCTCACCGTCC--AGAATCTCCAGGACCCTGGACTGTGGCTGCCACC------AGCCTTGAGCCATCCCTTCCCTCCCACAGCCCTGCTCTGCTGGTCTGGGACCTGCTATGCTCCACATCTGCATTCACAAGGGAGCTGGGAGGTTCCTGTGGCAGGAGCAGAGAAGTGCCAACCAGGCCTACTGCTTGCACCCCAGTGGTCTGGTCTTTCT------------GGAGACATCTG----GGAAAACACTGGTTC-TTGGGATTCCT-AAGGTGGGAGAAGGCTGGTCCTGGGGGCACGCGGCCAGTCCCTGCTCAGGACAGAGTGTGAGTGGTGAGGTTTACCTCTACAAATGCGGAGACCAGGCTGGGCTCT------------TCTCACCCCCAGAGTAGAGATAGA------AGATTTG-AAGGCTTCGTGGGACAGGA-GTATTTGTCCGTGCTGCTTCTGAATGGAG-CCCCCCAAGAAATACACAGGGATTGTGTTTGTGACATGGGTGCAACTCA----------TGATGCCCAAAGATGTCAAGTGGGGCTGGTCG--------------TTGGAAGTCTGTGCAGCTCTTGACAGTCCTCACAGGCCACCTGGCCACAGCCAGCCTCTTCTTGGGACTGGCCCAGGAGACTGCACAGCTGTGCACCGTGGAGCCTGGAGGGAAG-GAAGGAACAAGGG---CTTCTGATCACTT-TT----------CCTTGGAGTAAGTAGGCAGCCCATATGA--CCCCTTTCAAGTCCTATCAGCAGCTGCAGGAG---------TTTTCCCCACCAATTCTCTGCCATCCATATGGG i canFam3.chr6 I 14 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I a score=3843.000000 s hg38.chr7_KI270899v1_alt 149664 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 24029 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 539796 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 111193 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 171419 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33633004 1 + 192294377 T i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 16988243 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 I 9 s colAng1.NW_012117710v1 314514 1 + 6586416 C i colAng1.NW_012117710v1 C 0 I 6 s calJac3.chrUn_GL286444 43843 1 + 138751 C i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 359273 1 - 2409723 T i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 522791 1 - 2125214 C i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 111098 1 + 376347 T i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61041054 1 - 77573801 C i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e chlSab2.chr28 124245 7 - 21531802 I e manLeu1.NW_012101810v1 156444 9 - 2515279 I e macNem1.NW_012019910v1 4400221 9 - 9440265 I e rheMac8.chr3 34017037 9 + 185818997 I a score=44701.000000 s hg38.chr7_KI270899v1_alt 149665 19 + 190869 AGCCTTGCTTTCGGGGCAC s panTro5.chr7_NW_015973580v1_random 24030 19 - 83720 AGCCTTGCTTTCGGGGCAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 539797 19 + 162613886 AGCCTTGCTTTCAGGGCAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 111194 19 - 432965 AGCCTTGCTTTCGGGGCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 171420 19 + 85365473 AGCGTCGCTTTCCGGGCAC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33633005 2 + 192294377 ---------------GC-- i macFas5.chr3 C 0 C 0 s calJac3.chrUn_GL286444 43844 19 + 138751 GGCGTTGCTCTTGGGGCAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 359274 19 - 2409723 GGTGTTGCTCTTGGGGCAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 522792 19 - 2125214 GGCATTGCTCTTGGGGCAT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 111099 19 + 376347 GGCGTTGCTCGTGGGGCAT i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61041055 19 - 77573801 AGCCTTGCTTTCAGGCTGT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 314515 6 + 6586416 I e otoGar3.GL873611 2246990 6717 - 8137123 I e chlSab2.chr28 124245 7 - 21531802 I e manLeu1.NW_012101810v1 156444 9 - 2515279 I e cerAty1.NW_012002954v1 16988244 9 - 21915920 I e macNem1.NW_012019910v1 4400221 9 - 9440265 I e rheMac8.chr3 34017037 9 + 185818997 I a score=7098.000000 s hg38.chr7_KI270899v1_alt 149684 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 24049 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 539816 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 111213 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 171439 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33633007 1 + 192294377 A i macFas5.chr3 C 0 I 5 s chlSab2.chr28 124252 1 - 21531802 A i chlSab2.chr28 I 7 I 1 s colAng1.NW_012117710v1 314521 1 + 6586416 A i colAng1.NW_012117710v1 I 6 I 1 s calJac3.chrUn_GL286444 43863 1 + 138751 A i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 359293 1 - 2409723 A i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 522811 1 - 2125214 A i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 111118 1 + 376347 A i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61041074 1 - 77573801 A i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e manLeu1.NW_012101810v1 156444 9 - 2515279 I e cerAty1.NW_012002954v1 16988244 9 - 21915920 I e macNem1.NW_012019910v1 4400221 9 - 9440265 I e rheMac8.chr3 34017037 9 + 185818997 I a score=-10785.000000 s hg38.chr7_KI270899v1_alt 149685 2 + 190869 AT s panTro5.chr7_NW_015973580v1_random 24050 2 - 83720 AT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 539817 2 + 162613886 AT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 111214 2 - 432965 AT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 171440 2 + 85365473 AT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34017046 1 + 185818997 A- i rheMac8.chr3 I 9 C 0 s macFas5.chr3 33633013 1 + 192294377 A- i macFas5.chr3 I 5 C 0 s macNem1.NW_012019910v1 4400230 1 - 9440265 A- i macNem1.NW_012019910v1 I 9 C 0 s chlSab2.chr28 124254 1 - 21531802 A- i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 156453 1 - 2515279 A- i manLeu1.NW_012101810v1 I 9 C 0 s colAng1.NW_012117710v1 314523 1 + 6586416 A- i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chrUn_GL286444 43864 2 + 138751 AT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 359294 2 - 2409723 AT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 522812 2 - 2125214 AT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 111119 2 + 376347 AT i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61041075 2 - 77573801 AT i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e cerAty1.NW_012002954v1 16988244 9 - 21915920 I a score=1173288.000000 s hg38.chr7_KI270899v1_alt 149687 149 + 190869 ---GAAAG----AAAC----ATGACTGGAGACATTACCAAGACCTGTCACTTGCTACCTTCTCTTTCTGAAGCCGTAAACATGAGGAAAGACTCATCGTTAGGTTATTATGAATGATGGACCAGCTTATGTGTTTCAATGAAAGCTAGGCTATCACTG---------------AG--- s panTro5.chr7_NW_015973580v1_random 24052 153 - 83720 ---GAAAGAAATAAAC----ATGACTGGAGAGATTACCAAGACCTGTCACTCGCTACCTTCTCTTTCTGAAGCCGTAAACATGAAGAAAGGCTCGTCGTTAGGTTATTATGAACGATGGACCAGCTTATGTGTTTCAATGAAAGCTAGGCTATCACTG---------------AG--- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 539819 153 + 162613886 ---GAAAGAAATAAAC----ATGACTGGAGAGATTACCAAGACCTGTCACTCGCTACCTTCTCTTTCTGAAGCCGTAAACATGAGGAAAGACTCGTCGTTAGGTTATTATGAACGATGGACCAGCTTATGTGTTTCAATGAAAGCTAGGCTATCACTG---------------AG--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 111216 153 - 432965 ---GAAAGAAATAAAC----ATGACTGGAGACATTACCAAGACCTGTCACTTGCTACCTTCTCTTTCTGAAGCCGTAAACATGAGGAAAGACTCATTGTTAGGTTATTATGAACGATGGACCAGCTTATGTGTTTCAAGGAAAGCTAGGCTATCACTG---------------AG--- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 171442 103 + 85365473 ---GAAAGAAATAAAC----GTGACTGGAGACATTACCAAGACCTGTCACTTGCCACCTTCTCCTTCTGAAGCCGTAAACATGAGGAAAGACTCGT-------------------------------------------------TAGGCTATCACTG---------------A---- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34017047 149 + 185818997 ---GAAAG----AAAC----GTTACTGGAGACGTTACCAAGACCTGTCACTTGCTGTCCTGTCTTTCTCAAGCCGTAAACATGACAGAAGACTCATCGTTAGATTATTACGAGCGACGGACCAGCTTATGCATTTCAGTGAAAGCGAGGCTATCACCG---------------AG--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33633014 149 + 192294377 ---GAAAG----AAAC----GTTACTGGAGACGTTACCAAGACCTGTCACTTGCTGTCCTGTCTTTCTCAAGCCGTAAACATGACAGAAGACTCATCGTTAGATTATTACGAGCGACGGACCAGCTTATGCATTTCAGTGAAAGCGAGGCTATCACCG---------------AG--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4400231 149 - 9440265 ---GAAAG----AAAC----GTTACTGGAGACGTTACCAAGACCTGTCACTTGCTGTCCTGTCTTTCTCAAGCCGTAAACATGACAGAAGACTCATCGTTAGATTATTACGAGCGACGGACCAGCTTATGCATTTCAGTGAAAGCGAGGCTATCACCG---------------AG--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16988253 149 - 21915920 ---GAAAG----AAAC----GTTACTGGAGACGTTACCAAGACCTGTCACTTGCTGTCCTGTCTTTCTCAAGCCGTAAACACGACAGAAGACTCATCGTTAGATTATTACGAGCAACGGACCGGCTTATGCATTTCAGTGAAAGCGAGGCTATCACTG---------------AG--- i cerAty1.NW_012002954v1 I 9 C 0 s chlSab2.chr28 124255 149 - 21531802 ---GAAAG----AAAC----GTTACTGGAGACATTACCAAGACCTGTCACTTGCTGCCCTGTCTTTCTCAAGCCGTAAACACGACAGAAGACTCGTCGTTATATTATTACAAGCGACGGACCGGCTTGTGCATTTCCGTGAAAGCGAGGCTGTCGCCG---------------AG--- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 156454 149 - 2515279 ---GAAAG----AAAC----GTTACTGGAGACGTTACCAAGACCTGTCACTTGCTGTCCTGTCTTTCTCAAGCCGTAAACACGACAGAAGACTCATCGTTAGATTATTACGAGCGACGGACCAGCTTATGCATTTCAGTGAAAGCGAGGCTATCACCG---------------AG--- i manLeu1.NW_012101810v1 C 0 I 387 s colAng1.NW_012117710v1 314524 145 + 6586416 ---GAAAG----AAAC----ATTACCGGAGACATTACCAAGACCTGTCACTTGCTGCC----CTTTCTCAAGCCGTAAACATGACAGAAGATTCATCGTTAGATTATTACAAGCAATGGACCAGCTTATGCATTTCAGTGAAAGCGAGGCTATCACCG---------------AG--- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 43866 149 + 138751 ---TAAAG----AAAT----AATGCTGGAGGCATTACCAAGACCTGACACTTGGTACCTTCTCTTTCTGAAGCTGCAAACGTGAAAGAGGACTCATGGTTAGATTATTATGAACGACACACTAGTCTATGCATTTCACTGAAAGCTAAGCTGTCACTG---------------GG--- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 359296 164 - 2409723 ---TAAAG----AAAT----AATGCTGGAGGCATTACCAAGACCTAACACTTGCTACCTTCTCTTTCTGAAGCTGCAAACGTGACAGAGGACTCGTGGTTAGATTATTATGAACAACGCACTGGTTTATGCATTTCACTGAAAGCTAAGCTGTCGCTGCGTGGCGGGGAGGGTGG--- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 522814 153 - 2125214 ---TAAAG----AAATTAACAATGCTGGAGGCATTACCAAGACCTGACACTTGCTACCTTCTCTTTCTGAAGCTGCAAACATGACAGAGGACTCATGGTTAGATTATTATGAACGACGCACTAGCTTATGCATTTCACTGAAAGCTAAGCTGTCGCTG---------------GG--- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 111121 112 + 376347 ---TAAAG----AAAGAAACAGTACTGGGGGCATTACCAAGACCGGACG-------------CTTTCTGAGGCTGCAAACGTGAC----------------------------TGACGGACCAGCTTATGCATTTCACTGAAAGCTAAGCTGTCGCTG---------------GG--- i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61041077 156 - 77573801 TAAGGAAAAAATAAAC----ATTACTGGAGACATTA-CAGGATGTGACACTTGCTGCCCT--CTTTCTGAAGCTGTAAACGTGATGGATGACCCATTGTTGGATTATTATGAAAGATGAACTAGCTTATGAATTTCAGCAGAACCTAAAATATCATCA---------------ATGAG i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I a score=453721.000000 s hg38.chr7_KI270899v1_alt 149836 66 + 190869 -CTTGCTGGCTTAAAGCTGTGTGAGCCCACTGCTTAATTTTTGGGACACAAAAGGTCTAGAAATGTC s panTro5.chr7_NW_015973580v1_random 24205 66 - 83720 -CTTGCTGGCTTAAAGCTGTGTGAGCCCACTGCTTAATTGTTGGGACACAAAAGGTCTAGAAAGGTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 539972 66 + 162613886 -CTTGCTGGCTTAAAGCTGTGTGAGCCCACTGCTTAATTGTTGGGACACAAAAGGTCTAGAAAGGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 111369 66 - 432965 -CTTGCTTGCTTAAAGCTGTGTGAGCCCACTGCTTAATTGTTGGGACACAAAAGGTCTAGAAAGGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 171545 63 + 85365473 ----GCTGGCTTAAAGCTTTGTAAGCCCACTGCTTAACTGTCGTGACACAAAAGGTCTGGAAAGGTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34017196 66 + 185818997 -ATCCCGGGCTTGATGCTTTCTAAGCCAACTGCTTAATTGTTGTGGCACAAACGGTCTGGAAGGATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33633163 66 + 192294377 -ATCCCGGGCTTGATGCTTTCTAAGCCAACTGCTTAATTGTTGTGGCACAAACGGTCTGGAAGGATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4400380 66 - 9440265 -ATCCCGGGCTTGATGCTTTCTAAGCCAACTGCTTAATTGTTGTGGCACAAACGGTCCGGAAGGATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16988402 66 - 21915920 -ATCCCGGGCTTGATGCTTTCTAAGCCAACTGCTTAATTATTGTGGCACAAACGGTCCGGAAGGATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 124404 66 - 21531802 -ATCGCAGGCTTGAGGCTTTCTAAGCCAACTGCTTAATTGTTGTGGCACAAACAGCCTGGAAAGATT i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 314669 66 + 6586416 -ATTGCCGGCTTGATGCTTTCTAAGCCAACTGCTTAATTGTTGTGGCACGAATGGTCTGGAAAGATT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 44015 66 + 138751 -CAGGCCAGCTTAATGCTTCATAAGCCAACTGCTTAATTGCCATGACACAAAAGGTCAAGAAAGATT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 359460 66 - 2409723 -GAGGCCGGCTTAATGCTTCATAAGCCAACTGCTTAGTTGTCATGACACAAAAGGTCTAGAAAGATT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 522967 66 - 2125214 -CGGGCCAGCTTAATGCTTCATAAGCCAACTGCTTAATTGTCATGACACAAAAGGTCTAGAAAGATT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 111233 53 + 376347 -CGGTCCAGCT----------TAAGCCAACGGCTTAATTG---TGACACAAAAGGTCTAGAAAGATT i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61041233 67 - 77573801 CACCGTCAGCTTAATGGTTCATAAACCAGCTGCTTAATTGTTGTGACACAGAAGGTCGAGAAAGATT i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e manLeu1.NW_012101810v1 156603 387 - 2515279 I a score=3404372.000000 s hg38.chr7_KI270899v1_alt 149902 394 + 190869 GCCTGGCC-TTTTCCAGTAGAGGTTGGCCCAAGAGCATGAATTTTCTGGCCAGCATTTCGTTTCTTTTTCCTTCACGT-ATGTTGCCAGCACTC-AGGGCCTGT--GGACCTGCCTTCTGTGCAGGGTGTCTTGTCTTTCGGGGCCGTGGC-TGCTTCCGTA---GGAGGCATG-GCAGGTG-CCAGCCTGGGGCTGAGCTCTCCCCACGTGGAGCTCAGGGCCTCAGAGGCCAAAGGCACA-TCCCTCAGAGGGCCTGGAAATGGAAGGCCGGGCTGGGTTTACGGCACACC-CAGGC-CGG-GCTCTAGTGGCTCATGG--TCACAGCCTGTCCACAcagcatggcgctccagagaatgctcagaggcttaggctcagacaga-----catgaattcacgtctgatgggcggag s panTro5.chr7_NW_015973580v1_random 24271 394 - 83720 GCCTGGCC-TTTTCCAATAGAGGTTGGCCCGAGAGCATGAATTTTCTGGCCAGCGTTTCGTTTCTTTTTCCTTCACGT-ATGTGGCCGGCACTC-AGGGCCTGT--GGACCTGCCTTCTGTGCAGGGTGTCTTGTCTTTCGGGGCCGTGGC-TGCTTCCCTA---GGAGGCATG-GCAGGTG-CCAGCCTGGGGCTGAGCTCTCCCCACGTGGAGCTCAGGGCCTCCGAGGCCAAAGGCACA-TCCCTCAGAGGGCCTGGAAATGGAAGGCCCGGCTGGGTTTACGGCACACC-CGGGC-CGG-GCTCTAGTGGCTCATGG--CCACAGCCTGTCCACAcagcgtggcactccagagaatgctcagaggcttaggctcagacaga-----catgaattcacgtctgatgggcggag i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 540038 394 + 162613886 GCCTGGCC-TTTTCCAGTAGAGGTTGGCCCAAGAGCATGAATTTTCTGGCCAGCGTTTTGTTTCTTTTTCCTTCACGT-ATGTGGCCGGCACTC-AGGGCCTGT--GGACCTGCCTTCTGTGCAGGGTGTCTTGTCTTTCGGGGCCGTGGC-TGCTTCCCTA---GGAGGCATG-GCAGGTG-CCAGCCTGGGGCTGAGCTCTCCCCACGTGGAGCTCAGGGCCTCCGAGGCCAAAGGCACA-TCCCTCAGAGGGCCTGGAAATGGAAGGCCCGGCTGGGTTTACGGCACACC-CGGGC-CGG-GCTCTAGTGGCTCATGG--CCACAGCCTGTCCACgcagcgtggcgctccagagaatgctcagaggcttaggctcagacaga-----catgaattcacgtctgatgggcggag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 111435 393 - 432965 GCCTGGCC-TTTTCCA-TAGAGGTTGGCCCAAGAGCATGAATTTTCTGGCCACCATTTCGTTTCTTTTTCCTTCACGT-ATGTGGCCAGCACTC-AGGGCCTAT--GGATCTGCCTTCTGTGCAGGGTGTCTTGTCTTTCGGGGCCGTGGC-TGCTTCCGTA---GGAGGCATG-GCAGGTG-CCAGCCTGGGGCTGAGCTCTCCCCACGTGGAGCTCAGGGCCTCAGAGGCCAAAGGCACA-TCCCTCAGAGGGCCTGGAAATGGAAGGCCCGGCTGGGTTTACGGCACACC-CAGGC-CAG-GCTCTAGTGGCTCATGG--TCACAGCCTGTCCACAcagcgtggcgctccagagaatgctcagaggcttaggctcagacaga-----catgaattcacgtctgatgggcggag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 171608 394 + 85365473 GTCTGGCT-TTTTCCAGTGAAGGTTGACCCAAGAGCATGAATTTTCTGGGCAGTGCTCCGTTTCTTTTTCCTTCATGT-GTGTGGCCAGCGCTC-AGGGCCTGT--GGACCTGCCTTCTGTGCAGGGCGTCTTGTCTTTCGGGGCTGTGGC-TGCTTCTGCA---GGAGCCATG-GCAGGTG-CCAGCCTGGGGCTGAGCTCTCCCCACGTGGAGCTCAGGGCCTCAGAGGCCAATGGCACA-TCCCTCAGAGGGCGTGGAAATGGAAGGCCCGGCTGGGTTTACGGCACACC-TGGGC-CGG-GCTCTAGCGGCTCATGG--TCACAGCCTGTCCACACAGAGTGGCGCTCCAGAGAACGTGCAGGGGCTTAGGCTCAGACAGA-----CACGAATTCACTTCTGATGGGCGGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34017262 383 + 185818997 GCCTGGCC-TCTTCCAGTAAATGTTAGCCCAAGGGCATGGATTTTCTGGGCAGTGCTTCGTTTCTTTTTCCTTCATAT-ATGTGGCCAGGCCTC-AGGGCCTGC--GGACCTGCCTGCTGTGCAGGGCATCTTGTCTTTGGGGGCCGTGGT-TGCTTCTG---------------GCAGGTG-CCAGCCTGGGGCTGAGGTCTCCCCACGTGGAGCTCAGGGCCTCAGAGGCCAATGGCACA-TCCCTCAGAGAGCCTGGAAATGGAAGGCCCAGCTGGGTTTACGGCACACC-TGGGC-CGG-GCTGTAGTGGCTCCTGG--TCACAGCCTGTCCACACAGAGTGACATTCCAGAgaacaggcagaggcttaggctcaggcaga-----cactggttcactctctgtgtgctgag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33633229 383 + 192294377 GCCTGGCC-TCTTCCAGTAAATGTTAGCCCAAGGGCATGGATTTTCTGGGCAGTGCTTCGTTTCTTTTTCCTTCATAT-ATGTGGCCAGGCCTC-AGGGCCTGC--GGACCTGCCTGCTGTGCAGGGCATCTTGTCTTTGGGGGCCGTGGT-TGCTTCTG---------------GCAGGTG-CCAGCCTGGGGCTGAGGTCTCCCCACGTGGAGCTCAGGGCCTCAGAGGCCAATGGCACA-TCCCTCAGAGAGCCTGGAAATGGAAGGCCCAGCTGGGTTTACGGTACACC-TGGGC-CGG-GCTGTAGTGGCTCCTGG--TCACAGCCTGTCCACACAGAGTGACATTCCAGAGAACAGGCAGAGGCTTAGGCTCAGGCAGA-----CACTAATTCACATCCGACGGGCAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4400446 383 - 9440265 GCCTGGCC-TCTTCCAGTAAATGTTAGCCCAAGGGCATGGATTTTCTGGGCAGTGCTTCGTTTCTTTTTCCTTCATAT-ATGTGGCCAGGCCTC-AGGGCCTGC--GGACCTGCCTGCTGTGCAGGGCATCTTGTCTTTGGGGGCCGTGGT-TGCTTCTG---------------GCAGGTG-CCAGCCTGGGGCGGAGGTCTCCCCACGTGGAGCTCAGGGCCTCAGAGGCCAATGGCACA-TCACTCAGAGAGCCTGGAAATGGAAGGCCCAGCTGGGTTTACGGCACACC-TGGGC-CGG-GCTGTAGTGGCTCCTGG--TCACAGCCTGTCCACAcagagtgacgttccagagaacaggcagaggcttaggctcaggcaga-----cacgaattcacatccgacgggcagag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16988468 383 - 21915920 GCCTGGCC-TCTTCCAGTAAATGTTAGCCCAAGGGCATGGATTTTCTGGGCAGTGCTTCGTTTCTTTTTCCTTCATAT-ATGTGGCCAGGCCTC-AGGGCCTGC--GGACCTGCCTGCTGTGCAGGGCATCTTGTCTTTGGGGGCCGTGGT-TGCTTCTG---------------GCAGGTG-CCAGCCTGGGGCTGAGGTCTCCCCACGTGGAGCTCAGGGCCTCAGAGGCCAATGGCACA-TCCCTCAGAGAGCCTGGAAATGGAAGGCCCAGCTGGGTTTACGGCACACC-TGGGC-CGG-GCTGTAGTGGCTCCTGG--TCACAGCCTGTCCACAcagagtgacgttccagagaacagacagaggcttaggctcaggcaga-----cacgaattcacatccgacgggcagag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 124470 394 - 21531802 GCCTGGCC-TCTTCCAGTACATGTTAGCCCAAGGGCATGGATTTTCTGGGCAGTGCTTCGTTTCTTTTTCCTTCATCG-ACGTCGCCAGGGCTC-AGGGCCTGT--GGACCTGCCTTCTGTGCAGGGGGTCTTGTCTTTGGGGGCCGTGGT-TGCTTCTGCA---GGAGCCATA-GCAGGTG-CCAGCCTGGGGCTGAGGTCTCCCCACGTGGAGCTCAGGGCCTCAGAGGCCAATGGCACA-TCCCTCAGAGGGCCTGGAAATGGAAGGCCCGGCTGGGTTTACGGCACACC-TGGGC-CGG-GCTGTAGTGGCTCCTGG--TCACAGCCTGTCCACACAGAGTGATGCTCCGGAGAACAGGCAGAGGCTTAGGCTCAGGTAGA-----CACGAATGCATATCCGACGGGCAGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 156990 383 - 2515279 GCCTGGCC-TCTTCCAGTAAATGTTAGCCCAAGGGCATGGATTTTCTGGGCAGTGCTTCGTTTCTTTTTCCTTCATAT-ATGTGGCCAGGCCTC-AGGGCCTGC--GGACCTGCCTGCTGTGCAGGGCATCTTGTCTTTGGGGGCCGTGGT-TGCTTCTG---------------GCAGGTG-CCAGCCTGGGGCTGAGGTCTCCCCACGTGGAGCTCAGGGCCTCAGAGGCCAATGGCACA-TCCCTCAGAGAGCCTGGAAATGGAAGGCCCAGCTGGGTTTACGGCACACC-TGGGC-CAG-GCTGTAGTGGCTCCTGG--TCACAGCCTGTCCACAcagagtgacgtgccagagaacaggcagaggcttaggctcaggcaga-----cacgaattcatatccgaccggcagag i manLeu1.NW_012101810v1 I 387 C 0 s colAng1.NW_012117710v1 314735 394 + 6586416 GCCTGGCC-TCTTCCAGTAAATGTTAGCCCAAGAGCATGGATTTTCTGGGCAGTGCTTCGTTTCTTTTTCCTTCACGT-ATGTGGCCAGTGCTC-AGGGCCTGT--GGACCTGCCTTCTGTGCAGGGCGTCTTGTCTTTGGGGGCCGTGGC-TGCTTCTGCA---GGAGCCATG-GCAGGTG-CCAGCCTGGGGCTGAGGTCTCCCCACGTGGAGCTCAGGGCCGCAGAGGCCAATGGCACA-TCCCTCAGAGGGCCTGGAAATGGAAGGCCTGGCTGGGTTTACAGCACACC-TGGGC-CGG-GCTGTAGTGGCCCATGG--TCACAGCCTGTCCACACTGAGTAACGCTCCGGAGGACAGGCAGAGGCTTAGGCTCAGGCAGA-----CACGAATTCATGTCCGACGGGCAGAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 44081 377 + 138751 GCCTGGCC-TTTTTCCATAAAGGTTAGCCTGAGGGCATGGATTTTCTGGGCAGCATTTTATT--------ATTCGTGT-GTGTGGCCAGTGCTC-AGGGCCTG---GGACCTGCCTTCGGTGCAGGGTGTCTTGCCTTT-GGGATGGTTGC-TGCTGCCGCA---GGAGCCATG-GCAGGTG-CCAGCCTGGGGCTGAGCTCTCCCCACATGGAGCTCA--------GAGGCCGATGGCACA-TCCCTCAGAGGGCCTAGAAATGGGAGGCCCAGCTGAGTTGACAGCACTAC-TGGGC-CTGTGCTGTATCGGCTCATGA--CCACAGTCTGTCCACTCAGAGTGGCGCTCCAGAGAATAGGCATAGGCTTAGGCTCAGATAGA-----CACAAATTCACATCTGACGGGTGGAG i calJac3.chrUn_GL286444 C 0 I 20 s saiBol1.JH378296 359526 353 - 2409723 GCCTGCTC-TTTTTCCATAAAGGTTGGCCTGAGAGCATGGGTTTTCTGGGCAGCATTTTGTT--------CTTCGTGT-GTGTGGCCAGTGCTC-AGGGCCTG---GGACC---------------------TGCCTTT-GGGATGGGGGC-TGCT---GCA---GGAGCCATG-GCAGGCA-CCGGCCTGGGGCTGAGCTGTCCCAACATAGACCTCA--------GAGGCTGATGGCACA-TCCCTCAGAGGGCCTAGAAATGGCAGGCCCAGCTGAGTTGATAGCACACC-TGGGC-CTGGGCTGTATCAGCTCATGA--CCACAGCCTGTCCACTCAGAGTGGCGCTCCGGAGAACAGGCATAGGCTTAGGCTCAGACAGA-----CACAAAGTCACATCCGACGGGTGGAG i saiBol1.JH378296 C 0 I 24 s cebCap1.NW_016107703v1 523033 377 - 2125214 GCCTGGCC-TTTTTCCATAAAGGTTGGCCCGAGAGCATGGATTTTCTCGGCAGCATTTTATT--------CTTCATGC-ATGTGGCCAGTGCTC-AGGGCCTG---GGACCTGCCTTTGGTGCAGGGCATCTTGCCTTT-GGGATGGTGGC-TGCTGCTGCA---GGAGCCATG-GCAGGTG-CCAGCCTGGGGCTGAGCTCTCCCCACATGGAGGTCA--------GAGGCTGATGGCACA-TCCATCAGAGGGCCTAGAAATGGCAGGCCCAGCTGAGTTGACAGCACACC-TGGGC-CTGGGCTGTATCGGCTCATGA--CCACATTCTGTCCACTCAGAGTGGCGCTCCGAAGAACAGGCATAGGCTTAGGCTCAGGCAGA-----CACAAATTCATATCCGACAGGTGGAG i cebCap1.NW_016107703v1 C 0 I 46 s aotNan1.NW_018514293v1 111286 376 + 376347 GCCTGGCC-TTTTTCCATAAAGGATAGCCCGAGAGTATGGATTTTCTGGGCAGCATTTTATT--------CTTCGTGT-GTGTGGCCAGTGCTC-AGGGCCTG---GGACCTGCCTTCGGTGCAGGGCGTCTTGCCTTT-GGGATGGTGGC-TGCTTCCGCA---GGAGCTATG-ACAGGTG-CCAGCCTGGGGCTGAGCTCTCCCCACATGGAGCTCC--------GAGGCCGATGACACA-TCCCTCAGAGGGCCTAGAAATGGCAGGCCCAGCTGAGTTGACAGCACACC-TGGGC-CTG-GCTGTATCAGCTCATGA--CCACAGCCTGTCCACTCAGAACGGCGCTCCGGAGAACAGGCATAGGCTTAGGCTCAGACAGA-----CAGAAATTCACATCCGACGGGTGGAG i aotNan1.NW_018514293v1 C 0 I 24 s canFam3.chr6 61041300 384 - 77573801 GCCTGGCCTTTTTCCAAAAGAGGTTAGCC-GAGAACATGGGTTTTCTCAGTAGCCTTCCGGTTCTTTTTCCTTCATGTCCTACAGCCAGTGCCCTAGAGACTTCCAGAACCTGCCTTCTATGCGGGACATGTTTTTCTT--GGGCAGCAGCATGGTTGTGCACTTGGAGCCAAGTGCAGGTGACCAAGCT-GGCCAGGGCTCAGTTCACATGGAGTTCAGGGCCCCACGGGCAGGTGACACACTCTGTCAGAGGACACAAAGGTTACAGGTGCCTGTGAGTGTACAGCACCTCTTGGGCACAG-ACTCT-----CCCATGGATCCGAAGCctgggcacacagagcagtgattgagagaacg------ggcttggaacaggacagatctgccatgaacctg---------------- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I a score=159110.000000 s hg38.chr7_KI270899v1_alt 150296 19 + 190869 cacccgt---gtgaccatggca s panTro5.chr7_NW_015973580v1_random 24665 22 - 83720 cacccgttgggtgaccgtggca i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 540432 22 + 162613886 cacccgttgggtgaccgtggca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 111828 22 - 432965 cacccgttgggtgaccatggca i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 172002 22 + 85365473 CACCCGTTGGGTGACCATGGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34017645 22 + 185818997 cacctgttgggtgaccatggca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33633612 22 + 192294377 CACCTGTTGGGTGACCATGGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4400829 22 - 9440265 cacctgttgggtgaccatggca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16988851 22 - 21915920 cacctgttgggtgaccgtggca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 124864 22 - 21531802 CACCTGTTGGGTGACCATGACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 157373 22 - 2515279 cacctgttgggtgaccatggca i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 315129 22 + 6586416 CACCTGTTGGGTGACCATGGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 44478 21 + 138751 CACCTATTGGGTGGCT-TGGCG i calJac3.chrUn_GL286444 I 20 I 1 s saiBol1.JH378296 359903 21 - 2409723 CACCTATTGGGTGGCT-TGGCG i saiBol1.JH378296 I 24 I 1 s aotNan1.NW_018514293v1 111686 21 + 376347 CACCTATTGGGTGGCT-TGGCG i aotNan1.NW_018514293v1 I 24 I 1 s canFam3.chr6 61041684 14 - 77573801 ------ctgcatgaccttag-- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I e cebCap1.NW_016107703v1 523410 46 - 2125214 I a score=2784837.000000 s hg38.chr7_KI270899v1_alt 150315 292 + 190869 ggttgcctcc--tttttatctgcaaagctgtggcaatgat--ccccacctccaaggactccagcgaggcaca----tgtgagacgctgcatgggaagagcGTCCT-GCAAACCCGGC-------CAGATGGCAGCTGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGATGCCTGCCTACCCAGCTCTGTTTCTGTTCACATCTCAGTGTGACAAGCAGCCTGGAAGGGCCATGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACCTGGTGAGCACAGACTGCGGCTTCCCAGACACCAACAGGGGAGGGGA s panTro5.chr7_NW_015973580v1_random 24687 292 - 83720 ggttgcctcc--tttttatctgtaaagctgtggcaatgat--gcccacctccaagggctccagcaaggcaca----tgtgagacgctgcatgggaagagcGTCCT-GCAAACCCGGC-------CAGATGGCAGCTGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGATGCCTGCGTACCCAGCTCTGTTTCTGTTCACATCTCAGTGTGACAAGCAGCCTGGAAGGGCCATGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACCTGGTGAGCACGGACTGCGGCTTCCCAGACACCAACAGGGGAGGGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 540454 292 + 162613886 ggttgcctcc--tttttatctgcaaagctgtggcaatgat--gcccacctccaagggctccagcaaggcaca----tgtgagacgctgcatgggaagagcGTCCT-GCAAACCCGGC-------CAGATGGCAGCTGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGATGCCTGCGTACCCAGCTCTGTTTCTGTTCACATCTCAGTGTGACAAGCAGCCTGGAAGGGCCATGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACCTGGTGAGCACGGACTGCGGCTTCCCAGACACCAACAGGGGAGGGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 111850 286 - 432965 ggttgcctcc--tttttatctgcaaagctgtggcaatgat--gcccacctccaagggctccagcaaggcaca----tgtgagac---gcatgggaagagcGTCCT-GCAAA-CCGGC-------CAGATGGCAGCTGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGACGCCTGGCTACCCAG--CTGTTTCTGTTCACATCTCAGTGTGACAAGCAGCCTGGAAGGGCCATGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACCTGGTGAACACAGACTGCGGCTTCCCAGACACCAACAGGGGAGGGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 172024 292 + 85365473 GGTTGCCTCC--TTTTTATCTGCAAAGCTGTGGCAAAGAT--GCCCACCTCCAAGGGCTCCTGCGCAGCACA----TGTGAGACGCTGTGTGGGAAGAGCATCTT-GCAAACCTGGC-------CAGATGGCAGCTGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGACGCCTGCCTACCCAGCTCTGTTTCTGTTCACATCACAGTGTGACAAGCAGCCTGGAAGGGCCACGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCCTACCTGGTGAGCACAGACTGCGGCTTCCCAGACACCAACGGGGGAGGGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34017667 291 + 185818997 ggctgcctcc--tttttatctgcaaagctggggcgaggat--gcccacctccaggggctcctgcaaggcaca----tgtgagacgctgcaggggaagagcctctt-acaaacccggc-------cagatggcagccgcAC-CGTCCCTCTGCCAGGTGTCCCTGGAGACGCCTGCCTACCCAGGTCTGTTTCTGTTCACATCTCCGTGTGACAAGCAGCCTGGAAGGGCCATGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACGTGGCGAGCACAGACCGCGGTTTCCCAGACACCAGCAGGGGA-GGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33633634 291 + 192294377 GGCTGCCTCC--TTTTTATCTGCAAAGCTGGGGCGAGGAT--GCCCACCTCCAGGGGCTCCTGCAAGGCACA----TGTGAGACGCTGCAGGGGAAGAGCCTCTT-GCAAACCCGGC-------CAGATGGCAGCCGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGACGCCTGCCTACCCAGGTCTGTTTCTGTTCACATCTCCGTGTGACAAGCAGCCTGGAAGGGCCATGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACGTGGCGAGCACAGACCGCGGTTTCCCAGACACCAGCAGGGGA-GGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4400851 291 - 9440265 ggctgcctcc--tttttatctgcaaagctggggcgaggat--gcccacctccaggggctcctgcaaggcaca----tgtgagacgctgcaggggaagagcctCTT-GCAAACCCGGC-------CAGATGGCAGCCACAC-CGTCCCTCTGCCAGGTGTCCCTGGAGACGCCTGCCTACCCAGGTCTGTTTCTGTTCACATCTCCGTGTGACAAGCAGCCTGGAAGGGCCATGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACATGGCGAGCACAGACCGCGGTTTCCCAGACACCAGCAGGGGA-GGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16988873 291 - 21915920 ggctgcctcc--tttttatctgcaaagctggggcgaggac--gcccacctccaggggctcctgcgaggcaca----tgtgagacgctgcaggggaagagcctCTT-GCAAACCCGGC-------CAGATGGCAGCCGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGACGCCTGCCTACCCTGGTCTGTTTCTGGTCACATCTCCGTGTGACAAGCAGCCTGGAAGGGCCATGATCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACGTGGCGAGCACAGACCGTGGTTTCCCAGACACCAGCAGGGGA-GGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 124886 281 - 21531802 GGCTGCCTCC--TTTTTGTCTGCAACGCTGGGGCGAGGAT--GCGCACCTCCAAGGGCCCCTGCGAGGCACA----TGTGAGACGCTGCAGGGGAAGAGCCTCTT-GCAAACCCGGC-------CGGATGGCAGCCGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGACGCCTGCCTACCCAGCTCTGTTTCTGTTCACATCTCCGTGTGACAAGCAGCCT----------TGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACGTGGAAAGCACAGACCGCGGCTTCCCAGACACCAGCAGGGGA-GGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 157395 291 - 2515279 ggctgcctcc--tttttatctgcaaagctggggcgaggac--gcccacctccaggggctcctgcgaggcaca----tgtgagatgctgcaggggaagagcctCTT-GCAAACCCGGC-------CAGATGGCAGCCGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGACGCCTGCCTACCCAGCTCTGTTTCTGTTCACATCTCCATGTGACAAGCAGCCTGGAAGGGCCATGCTCGAAAGG----------------------CTTGGGCCAGGAGCTCTTACGTGGCGAGCATAGACCGTGGTTTCCCAGACACCAGCAGGGGA-GGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 315151 292 + 6586416 GGCTGCCTCC--TTTTTATCTGCAAAGCTGGGGCGAGGAT--GCCCACCTCCAACGGCTCCTGCGAGGTACC----TGTGAGACCCTGCACGGGAAGAGCCTCTTGGCAAACCCGGC-------CAGATGGCAGCTGCAC-CGTCCCTCTGCCAGGTGTCCCTGGAGACACCTGCCTACCCGGCTCTGTTTCTGTTCACATCTCAGTGTGACAAGCAGCCTGGAAGGGCCATGCTCAAAAGG----------------------CTTGGGCCAGGAGCTCTTACATAGCGAGCACAGACTGCAGCTTCCCAGACCCCAGCAGCGGA-GGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 44500 291 + 138751 GGTTGCCTCC--CTTTTATCTGCGGAGCTGGGGCAGTGGTCCCCCCACCTCTAAGGGCTCCTGTGGGACACA----TGTGAGGTGCTGTGTGGGAAGAGCCTCCT-GTAAACCTGGC-------CAGATGGCAGCTGCAC-CCTCCCTCTACCAGGTGTCCCTGAAGACACCTGCCTACCCAGCTCTATTTCTGTTCACATCTCAGTGTGACAAGCAGCTGAGAAGGGCCATGCTCAAGGGG----------------------CTGGGGCCAGGAGTTCTCACCTGGTGCGAACAGACTGCAGCTTACCAGACACCAACA---GAGGGGA i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 359925 296 - 2409723 GGTTgcctcctttttttatctgcagagctgggacaatggtccccccacttccaagggctcctatgatacaca----tgtgaggcactgtgtgggaagagcctcct-gtaaacCCGGC-------CAGATAGCAGCTGCAC-CCTCCCTTTGCCAGGTGTCCCTGAAGACACCTGCCTACCCAACTCTGTTTCTGTTCACATCTCAGTGTGACAAGCAGCCTAGAAGGGCCGTGCTCGAGGGG----------------------CTGGGGCCAGAAGTTCTCACCTGGTGCGCACAGACTGTGGCTTCCCAGACACCAACAGGGGAGGGGA i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 523456 294 - 2125214 GGTTGCCTCC--tttttatctgcagagctggggcaatggtccccccacctccaagggctcctgtgggacaca----tgtgaggtgctatgtgggaagagcctcct-gtaaacCCGGC-------CAGATGGCAGCTGCAC-CCTCCCTCTGCCAGGTGTCCCTGAAGACACCTGCCTACCCAGCTCTGTTTCTGTTCACATCTCAGTGTGACAAGCAGCCTGGAAGGGCCGTGCTTGAGGGG----------------------CTGGGGCCAGGAGTTCTCACCTTGTGCGCACAGACTGCGGCTTCCCAGACACCAATAGGGGAAGGGA i cebCap1.NW_016107703v1 I 46 C 0 s aotNan1.NW_018514293v1 111708 293 + 376347 GGTTGCCTCC--tttttatgtgcagagctggggcaatggtccccccacctccgagggctcccgtgggacaca----cgtgagggactgtgtgggaagagcctcct-gtaaacCCGGC-------CAGGTGGCAGCTGCAC-CCT-CTTCTGCCAGGTGTCCCCGAACACACCTGCCTACCCAGCTGTATTTCTGTTCACATCTCAGTGTGACAAGCAGCCTGGAAGGGCCATGCTCGAGGGG----------------------CTGGGGCCAGGAGTTCCCACCTGGTGCGCACACACTGCGGCCTCCCAGACACCAGCAGGGGAGGGGA i aotNan1.NW_018514293v1 I 1 C 0 s canFam3.chr6 61041698 294 - 77573801 --------------------------gcaggGGTGATCAC--GCCCACTTCAGAGGGCCATCAGGTAGTACAACATAGTGAGATGCCTAGTGTG-AGAGTGTGC--ATAAACCCAGCCGGTAGGCAGGTGGCAGTGACACACATTCCTCTTCCAGGCTCCTCTGGCTACTGGAACCC-CCTAGTTCTGTTTCTGTTTAAACCTCAGCATTATAAGCAGCACAGAAGGCCTGTGATAGGAGGGCAGGGTCTGCACGGCAGAAAACCTGGGTCCAGGAGATCTTACCTGGTGAGCCCAG-----GGCTTACCTGACTCCAAGAGGTGAGCAGC i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2246990 6717 - 8137123 I a score=5365137.000000 s hg38.chr7_KI270899v1_alt 150607 645 + 190869 CAGATGTTGCGCCATGCTACGCCATTGACTTTTCTGCAACTGATACGATGGGAATAAT---ACTCCACTTCAGTTCACAGGG-TGGGGGCAAT----AGTGAGTGAGAGCTGGA-CAAGCCAGGGAATATTGAG---AGACCAAAGACACCTGTTGTGGA--TTTCCTGGGCCAT--GAGAGCCGCCTCTTGGACGT-------GCAG-------GGTTGACGTAGTCAGCCA--CTCTTCTGAAACAGCGGCCTGGGGACCAGGCAGCCACGGTGAACCCTGGTACATCACAGAGGGTGCTGACATGG----------GCTGTACTGTGGGAG----CTGCTGTGTAATCATTGC-ACACTGGG-CAGTGGTGTTTGGC--ATTCCCTGTgattacgttcagccacctagaca-gaaccccaaatcacg-gtgggtgaaacaagatgg-agcg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cattttc-ttccatgcacaggaagcatggcagctggcacttacagccagcgtgaagctcccaggggctcca-----gag-cc--aggagctc-tctgctcctgggcctcacatccctgctcatggcttccatgctccctgccagcgtggctgctggaactccagccttc--------tcat-------cACAATGCGTACAGGGAGGCTTCCAGAAGCTCTGGGTCAGTATTCCGGCGTGCATGTCCTCCACCCTAACGCACTCACCCA s panTro5.chr7_NW_015973580v1_random 24979 645 - 83720 CAGATGTTGCGCCATGCTACGCCATGGACTTTTCTGCAACTGATACGATGGGAATAAT---ACTCCACTTCAGTTCACAGGG-TGCGGGCAAT----AGTGAGTGGGAGCTGGA-CAAGCCAGGGAATATTGAG---AGACCAAAGACACCTGTTGTGGA--TTTCCTGGGCCAT--GAGAGCCGCCTCTTGGACGT-------GCAG-------GGTCGACGTAGTCAGCCA--CTCTTCTGAAACAGCGGCCTGGGGACCAGGCAGCCACGGTGAACCCTGGTACATCACAGAGGGTGCTGACGTGG----------GCTGTACTGTGGGAG----ATGCTGTGTAATCATTGC-ACACTGGG-CAGTGGTGTTTGGC--ATTCCCTGTgattacgttcagccgcctaaaca-gaaccccacatcacg-gtgggtgaaacgagatgg-agcg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cattttc-ttccatgcacaggaagcatggcggctggcacttacagccagcgtgaagctcccaggggctcca-----gag-cc--aggagctc-tctgctcctgggcctcacatccctgctcatggcttccatgctccctgccagtgtggctgctggagctccagccttc--------tcat-------cACAACGCGTACAGGGAGGCTTCCAGAAGCTCTGGGTCAGTATTCCTGCGTGCTTGTCATCCACCCTAACGCACTCACCCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 540746 645 + 162613886 CAGATGTTGCGCCATGCTACGCCATGGACTTTTCTGCAACTGATACGATGGGAATAAT---ACTCCACTTCAGTTCACAGGG-TGCGGGCAAT----AGTGAGTGGGAGCTGGA-CAAGCCAGGGAATATTGAG---AGACCAAAGACACCTGTTGTGGA--TTTCCTGGGCCAT--GAGAGCCGCCTCTTGGACGT-------GCAG-------GGTCGACGTAGTCAGCCA--CTCTTCTGAAACAGCGGCCTGGGGACCAGGCAGCCACGGTGAACCCTGGTACATCACAGAGGGTGCTGACGTGG----------GCTGTACTGTGGGAG----ATGCTGTGTAATCATTGC-ACACTGGG-CAGTGGTGTTTGGC--ATTCCCTGTgattacgttcagccgcctaaaca-gaaccccacatcacg-gtgggtgaaacgagatgg-agcg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cattttc-ttccatgcacaggaagcatggcggctggcacttacagccagcgtgaagctcccaggggctcca-----gag-cc--aggagctc-tctgctcctgggcctcacatccctgctcatggcttccatgctccctgccagtgtggctgctggagctccagccttc--------tcat-------cACAACGCGTACAGGGAGGCTTCCAGAAGCTCTGGGTCAGTATTCCTGCGTGCTTGTCATCCACCCTAACGCACTCACCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 112136 643 - 432965 CAGATGGTGTGCCATGCTACGCCATTGACTTTTCTGCCACTGATACGATGGGAATAAT---ACTCCACTTCAGTTCACAGGG-TGGGGGCAAT----AGTGAGTGAGAGCTGGA-CAAGCCAGGGAATATTGAG---AGACCAAAGACACCTGTTGTGGA--TTTCCTGGGCCAT--GAGAGCCGCCTCTTGGATGT-------GCAG-------GGTCGACGTAGTCAGCCA--CTCTTCTGAAACAGCGGCCTGGGGACCAGGCAGCCACGGTGAACCCTGGTACATCATAGAGGGTGCTGAC-TGG----------GCTGTACTGTGGGAG----CTGCTGTGTAATCATTGC-ACACTGGG-CAGTGGTATTTGGC--ATTCCCTGTgattacgttcagccgcctaaaca-gaaccccaaatcacg-gtgggtgaaacaggacgg-agcg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cattttc-ttccatgcacaggaagcatggcggctggcacttacagccagc-tgaagctcccaggggctcca-----gag-cc--aggagctc-tctgctcctgggccgcacatccctgctcatggcttccatgctccctgccagcgtggctgctggagctccagccttc--------tcat-------cACAACGCGTACAGGGAGGCTTCCAGAAGCTCTGGGTCAGTATTCCTGCGTGCATGTCACCCACCCTAACGCACTCACCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 172316 647 + 85365473 CAGATGTTGTGCTATGCTATGCCATTGACTTTTCTGCAACTGATACGATGGGAATAAT---ATTCCATTTCAGTTCACAGGGTTGGGGGCAAC----AGTGAGTGAGAGCTGGA-CAAGCCAGGGAATATTGAG---ACACCAAAGACACCTGCTGTGGA--TTTACTGGGCCAT--GAGAGCTGCCTCTTGGGCGT-------GCAG-------GGTCGACGTAGTCAGCCACTCTCTTCTGAAACAGTGGCCTGGGGACCAGGCAGCCACGGTGAACCCTGGTACATCACAGAGGGTGCTGACGTGG----------GCTGTACTGTAGGAG----CTGCTGTGTAATCATTGC-ACACTGGG-CAGTGGTGTTTGGC--ATTCCCTGTgattatgttcagccgcctaaaca-gaaccccaaatcacg-gtgggtaaaacaagatgg-agcg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cgttttc-ttccacgcacaggaagcatggcggctggcacctgcagccagcgtgaagctcccaggggctcca-----gag-cc---ggagctc-tctgcttctaggccgcacatccctgctcacggcttccatgctctctgccagcgtggctgctggagctccagccttc--------tcat-------cACAACGCGTACAGGGAGGCTTCCAGAAGCTCTGGGTCAGTATTCTTGTGTCCATGGCATCGACCATAACGCACTTACCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34017958 733 + 185818997 CGGATGTGGTGCCATGCTGTGCGACTGACTTGTCTGCAACTGATACGATGGGAATAAT---ATTCCACTTCAGTTCACAGGGTTGGGGGCAAC----GGT------------GA-CAAGCTAGGGAATGTTGAG---AGACCAAAGATACCTGTTGTGGA-TTTTACTGGGCCAT--GAGAGCTGCCTCTTGGACAT-------GCAG-------AGTCGACGTCCTCAGCCACTCTCTCCTGAAACAGCGGCCTGGGGACC-GGCAGCCACGGCGAACCCTGGGACATCACAGAGGGAGCTGACGTGGGCCGTGAGACGCTGCACTGCGGGAG----CTGCTGTGTCATCACTGGGGCACTTGG-CAGTGGTGTTCGGCGTATTCTCTGTGATTATGTTCAGCTGCCTCAGCA-GAAACCCAAATCGCG-GTGGGTAAAACAAGACGG-GGCGCGTCGTCTTCCAGGCACAGGAAACG-------------------------------------------------------------------------------------------------------------------------------------TGGTGGCTGGCACTTGCAGCCAGCGTGAAGCTCGCAGTGGGTAAAACAAGACAGAGTGTGTCGTC-TTCCATGCACAAGAAACATGGCGGCTGGCACTTGCAGCCAGCGTGAAGCTCGCAGGGGCTCCA-----GGA-CC--AGGAGCTCTTCTGCTTCTGGGCCGCACATCCCTGCTCACAGCTTCCACACTTCCGGCCGGTGTGGCTGCTGGACCTCCAGCCTTC--------TCAT-------CACCTCATGTGCGCGGAGGCTTCCGGGAGCTCTGGGCCGGTATTCCCGCATGCATGTCACTGACCCTAACGCGCTTACCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33633925 733 + 192294377 CGGATGTGGTGCCATGCTGTGCGACTGACTTGTCTGCAACTGATACGATGGGAATAAT---ATTCCACTTCAGTTCACAGGGTTGGGGGCAAC----GGT------------GA-CAAGCTAGGGAATGTTGAG---AGACCAAAGATACCTGTTGTGGA-TTTTACTGGGCCAT--GAGAGCTGCCTCTTGGACAT-------GCAG-------AGTCGACGTCCTCAGCCACTCTCTCCTGAAACAGCGGCCTGGGGACC-GGCAGCCACGGCGAACCCTGGGACATCACAGAGGGAGCTGACGTGGGCCATGAGACGCTGCACTGCGGGAG----CTGCTGTGTCATCACTGGGGCACTTGG-CAGTGGTGTTCGGCGTATTCTCTGTGATTATGTTCAGCTGCCTCAGCA-GAAACCCAAATCGCG-GTGGGTAAAACAAGACGG-GGCGCGTCGTCTTCCAGGCACAGGAAACGTGGTG--------------------------------------------GCTGGCA-----CTTGCAGCCAGC-----GTGAA-------GCTCGCAGTGGGTAAAACAAGACG------------------------------------------------------------------------GAGTGTGTCGTC-TTCCACGCACAAGAAACATGGCGGCTGGCACTTGCAGCCAGCGTGAAGCTCGCAGGGGCTCCA-----GGG-CC--AGGAGCTCTTCTGCTTCTGGGCCGCACATCCCTGCTCACAGCTTCCACACTTCCGGCCGGTGTGGCTGCTGGACCTCCAGCCTTC--------TCAT-------CACCTCATGTGCGCGGAGGCTTCCGGGAGCTCTGGGCCGGTATTCCCGCATGCATGTCACTGACCCTAACGCGCTTACCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4401142 733 - 9440265 CGGATGTGGTGCCATGCTGTGCGACTGACTTGTCTGCAACTGATACGATGGGAATAAC---ATTCCACTTCAGTTCACAGGGTTGGGGGCAAC----GGT------------GA-CAAGCTAGGGAATGTTGAG---AGACCAAAGATACCTGTTGTGGA-TTTTACTGGGCCAT--GAGAGCTGCCTCTTGGACAT-------GCAG-------AGTCGACGTCCTCAGCCACTCTCTCCTGAAACAGCGGCCTGGGGACC-GGCAGCCACGGCGAACCCTGGGACATCACAGAGGGAGCTGACGTGGGCCGTGAGACGCTGCACTGCGGGAG----CTGCTGTGTCATCACTGGGGCACTTGG-CAGTGGTGTTCGGCGTATTCTCTGTGATTATGTTCAGCTGCCTCAGCA-GAAACTCAAATCGCG-GTGGGTAAAACAAGACGG-GGCGCGTCGTCTTCCAGGCACAGGAAACGTGGTG--------------------------------------------GCT----------------------------------------------------------GGCACTTGCAGCCAGCGTGAAGCTC-------------------------------GCAGTGGGTAAAACAAGACGGAGTGTGTCGTC-TTCCACGCACAAGAAACATGGCGGCTGGCACTTGCAGCCAGCGTGAAGCTCGCAGGGGCTCCA-----GGG-CC--AGGAGCTCTTCTGCTTCTGGGCCGCACATCCCTGCTCACAGCTTCCACACTTCCGGCCGGCGTGGCTGCTGGACCTCCAGCCTTC--------TCAT-------CACCTCATGTGCGCGGAGGCTTCCGGGAGCTCTGGGCCGGTATTCCCGCATGCATGTCACTGACCCTAACGCGCTTACCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16989164 723 - 21915920 CGGATGTGGTGCCATGCTGTGCGACTGACTTGTCTGCAACTGATATGATGGGAATAAT---ATTCCACTTCAGTTCACAGGGTTGGGGGCAAC----GGT------------GA-CAAGCTAGGGAATGTTGAG---AGACCAAAGATACCTGTTGTGGA-TTTTACTGGGCCAT--GAAAGCTGCCTCTTGGACAT-------GCAG-------AGTCGACGTCCTCAGCCACTCTCTCCTGAAACAGCAGCCTGGGGACC-GGCAGCCACGGCGAACCCTGGGACATCACAGAGGGAGCTGACGTGGGCCGTGAGACGCTGCACTGCGGGAG----CTGCTGTGTCATCACTGGGGCACTTGG-CAGTGGTGTTCGGCATATTCTCTGTGATTACGTTCAGCTGCCTCAGCA-GAAACCCAAATCGCG-GTGGGTAAAACAAGACGG-GGCGCGTCGTCTTCCAGGCACAGGAAACGTAATC--------------------------------------------ACTTGCAGCCAGCCTGAAGCTCGCAGTGGGTAAAATAAGACG-----------------------------------------------------------------------------------------------GAGTGCGTCGTC-TTCCACGCACAAGAAACATGGCGGCTGGCACTTGCAGCCAGCGTGAAGCTCGCAGGGGCTCCA-----GGG-CC--AGGAGCTCTTCTGCTTCTGGGCCGCACATCCCTGCTCACGGCTTCCACGCTTCCGGCCGGCGTGGCTGCTGGACCTCCAGCCTTC--------TCAT-------CTCCTCATGTGCGCGGAGGCTTCCGGGAGCTCTGGGCCGGTATTCCCGCATGCATGTC----ACCCTAACGCGCTTACCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 125167 647 - 21531802 CGGATGTGGTGCCGTGCTCTGCGATTGACTTGTCTGCAACTGACACGATGGGAATAAT---ATTTCACTTCGGTTCACAGGGTTGGGGGCAAC----GGT------------GA-CAAGCCAGGGAATGTTGAG---AGACCAAAGACACCTGTTGTGGATTTTTACTGGGCCGT--GAGAGCTGCCTCTTGGCC-T-------GCAG-------GGTCGGCGTCGTCAGCCACTGTCTCCTGAAACAGCGGCCTGGGGACC-GGCAGCCACGGCGAACCCTGGGACATCACAGAGGGAGCTGACGTGGGCCGTGAGACGCCGCACTGCGGGAG----CTGCCGTGTCATC---GTGGCACTCGG-CAGTGGTGTTCGGCGTATTCTCTGTGATTACGTTCAGCTGCCTCAGCA-GAAACCCAAATCACG-GTGGGTAAAATGAGACGG-AGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGTC-TTCCACGCACGGGAAGCGTGGCGGCTGGCACTTGCAGCCAGCGTGAAGCTCGCGGGGGCTCCA-----GGG-CC--AGGAGCTCTTCCGCTTCTGGGCCGCACATCCCTGCTCACGGCTTCCACGCTCCCTGCCAGCGTGGCTGCTGGAGCTCCAGCCTTC--------TCAT-------CACCTCGCGTGGGGGGAGGCTCCCGGGAGCTCTGGGCCGGTATTCCCGCCTGCGTGTCACGGACCCTAACGCACTTACCCA i chlSab2.chr28 C 0 I 2 s manLeu1.NW_012101810v1 157686 728 - 2515279 CGGATGTGGTGCCATGCTGTGCGACTGACTTGTCTGCAACTGATACGATAGGAATAAT---ATTCCACTTCAGTTCACAGGGTTGGGGGCAAC----GGT------------GA-CAAGCCAGGGAATGTTGAG---AGACCAAAGACACCTGTTGTGGA-TTTTACTGGGCCGT--GAGAGCTGCCTCTTGGAC------------G-------TGCAGACGTCCTCAGCCACTCTCTTCTGAAACAGCGGCCTGGGGACC-GGCAGCCAGGGCGAACCCTGGGACATCACAGAGGGAGCTGAGGTGGGCCGTGAGACGCTGCACTGCGGGAG----CTGCTGTGCCATCACTGGGGCACTTGG-CAGTGGTGTTCGGCGTATTCTCTGTGATTACGTTCAGCTGCCTCAGCA-GAAACTCAAATCGCG-GTGGGTAAAACAAGACGG-GGCGCGTCATCTTCCACGCACAGGAAACGTGGTGCCTGGCACTTGCAGCCAGCGTGAAGCTCGCAGTGGGTAAAACAAGATG-------------------------------------------------------------------------------------------------------------------------------------GAGCACGTCGTC-TTCCACGCACAAGAAACATGGCGGCTGGCACTTGCAGCCAGCGTGAAGCTCGCAGGGGCTCCA-----GGG-CC--AGGAGCTCTTCCGCTTCTGGGCCGCACATCCCTGCTTACGGCTTCCACGCTTCCGGCCGGCGTGGCTGCTGGACCTCCAGCCTTC--------TCAT-------CACCTCACGTGCGCGGAGGCTCCCGGGAGCTCTGGGCCGGTATTCCCGCATGCATGTCACGGACCCTAACGCGCTTACTCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 315443 645 + 6586416 CAGATGCGGTGCCATGCTATGCGATTGACTTGTCTGCAACTGATACGATGGGAATAAT---ATTCCACTTCAGTTCACAGGGTTGTGGGCAAC----GGT------------GA-CAAGCCAGGGAATGTTGAG---AGACCAAAGACACCTGTTGTGGA--TTTACTGGACCGT--GAGAGCTGCCTCTTGGGCAT-------GCAG-------GGTCGACGTCGTCAGCCACTCTCTCCTGAAACAGCGGCCTCGGGACC-GGCAGCCACGGTGAACCCCGGGACATCGCAGAGGGAGCTGACGTGGGCCGTGAGATGCTGCACTGTGGGAG----CTGCTGTGTCATCATT---GCACTCTG-CAGTGGTGTTCGGCGTATTCTCTGTgattatgttcagctgcctcaacg-gaaacccaaatctca-gtgggtaaaacaagacgg-agcg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cgtcttc-ttccacgcacaggaagcgtgacggctggcacttccagccagcatgaagctcaca-gggctcca-----ggg-cc--aggagctcttctgcttctgggctgcacatccctgctcacggcttccacgctccctgctagcgtggctgctggagctccagccttc--------tcgt-------cACTTCGCGTGCGGGGAGGCTCCCAGGAGCTCCGGGTCGGTATTCCCGCGTGCATGTCACGGACCCTAACATACTTACCCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 44791 640 + 138751 CAGATGTTGTCCCGTGCTATGCAATTGACTTTCCTACAACTGATAGCATGGGAATAAT--AATTCCCCTTCAGTTAATAGGGTCAGGGGCAAT----AGTGAGTAAGAACTGGA-CAAGGCAG--------------------AAGACACCTGTTGTGGA--TCTACTGGGCCAT--GAGACCTGCCTCTTGTACAT-------GCAG-------GGTCAATATAGT-AGCCA--CTCTTCTGCAACAGGGGTCTGGGGACAAGGCAGCCA-GGTGAACCCTGGGACATCGCAGAGGGTGCTGACGTGAGCTTCAAGATGCTGCACAGTAGAAG----CTGCTGGGAAATAATTGC-ACACTGGG-CAGTGGTGTTTGGT--ATTCCCTGTgattacgttcagctgcctgaaca-gaaactcaaaccaca-gtggataaaacaagacag-ggtg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgtttgcttttcacacacagggagcttggaggctgacactaggagccagtgtgaagctcacaggggctcca-----ggg-ccacaggagcacgtctgcttctc--ctgcacgtccctgctcttggcttccgtgctccctgccagcatggctgctgaagctccagccttc--------tcat-------caccttgcttgcagggaggCTTCCAGGAGCTCTGGGTCAGTATTCCTGCATGCACATCATCAACCCTAATGCACTTACCCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 360221 640 - 2409723 CAGATGTTGTGCCGTGCTATGCAATTGACTTTCCTACAACTGATAGGATGCGACTAAT--AATTCCCTTTCAGTTAATAGGGTCGGGGGCAAT----AGTGAGTGAGAACCAGA-CAAGCCAG--------------------AAGACACCTGTTGTGGA--TCTACTGGGCCAT--GAGACCTGCCTGTGGTACAT-------GCAG-------GATCAATACAGT-AGCCA--CTCTTCAGCAACAGCAGTCTGGGGACCAGGCAGCCA-GGTGAACCCTGGGACATCGCAGAGGGTGCTGACGTGGGCTTCAAGATGCCGCACAGTAGAAG----CTGCCGGGAAGTAATTGC-ACACTGGG-CAGTGGTGTTTGGT--ATTCCCTGTgattacgttcagctgcctgaaca-gaaacccaaaccaca-atggatgaaacaagacag-ggtg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------catttgc-tttcacgcacaggaagcttggaggctggcactagcagccagtgtgaggctcacaggggcttca-----ggg-ccacaggagcacatccacttctctgctgcatgt-cctgctcctggcttccgtgctcactgccaacatggcttctggagctccagccttc--------TTAT-------CACCTTGCTTGCGGGGAGGCTTCCAGGAGCTCTGGGTCAGTATTCCTGCGTGCACATCATCAACCCTAATGCACTTACCCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 523750 640 - 2125214 CAGATGTTGTGCCGTGCTATGCAACTGACTTTCCTACAACTGATAGGATGGGAATAAT--AATTCCCTTTCAGTTAATAGGGTTGGGGGCAAT----AGTGAGTGAGAACCAGA-CAAGCCAG--------------------AAGACACCTATTGTGGA--TCTACTGGACCAT--GAGACCTTCCTCTTGTACAT-------GCAG-------GGTCAATATAGT-AGTCA--CTCTTCTGCAACAGGGGTCTGGGGACCAGGCAGCCA-GGTGAGCCCTGGGACATCACAGAGGGTGCTGACGTGGGCTTCAAGATGCTGCACAGTAGAAG----CTGC-GGGAAATAATTGC-ACACTGGG-CAGTGGTGTTTGGT--ATTCCCTGTgattacattcagctgcctgaaca-gaaacccaaaccaca-gtggataaaacaagacag-ggtg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------catttgc-tttcacgcacaggaggcttggaggctggcactagcagccagcgtgaagctcacaggggctcca-----ggg-ccacaggagcacgtctgcttctctgctgcatgtccctgctcctggcttccatgctccctgccagcatgtctgctggagctccagccttc--------tcat-------cACCTTGCTTGTGGGGAGGCTTCCAGGAGCTCTGGGTCAGTATTCCTGCGTGCACATCATCAACCCTAATGCACTTACCCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112001 637 + 376347 CAGATGTTGTGCCGTGCTGTGCAGTCGACTTTCCAACAACTGATAGGGTGGGAATAAT--AATTCCCCTTCAGTTAACAGGGTCGGGGGCAAC----GGTGAGTGAGAACCGGA-CGAGCCAG--------------------AAGACACCCGTTGTGGA--CCTACTCGACCAT--GAGACCTGCCTCTTGTACCT-------GCAG-------GGCCAACATAGT-AGCCA--CTCTTCTGCAACAG--GTCTGGGGACCAGGCAGCCA-GGTGAACCCTGGGACATCACAGAGGGTGCTGACGTGGGCTGCAAGATGCTGCATAGTAGAAG----CTTCCGGGAAATAATTGC-ACGCTGGG-CAGTGGTGTTTGGT--ATTCCCTGTgattacgttccgctgtctgaaca-gaaacccaaatcaca-gtggatgaaacaagacag-ggtg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cctttgc-tttcaggcacaggaagcttggaggctggcaccagcagccagcgtgaagctcacaggggctcca-----ggg-ccacaggagcacgtctgcttctc--ctgcacgtccctgctcctggcttctgtgccccctgccagcgtggctgctggagctccagccttc--------tcat-------cACCTTGCTTGCGGGGAGGCTTCCAGGAGCTCTGGGTCAGTATTCCCGCGAGCACATCATCAACCCTAATGCACTTACCCA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2253707 614 - 8137123 caaatattgatccatGGCACACAGCTGATTTTCCCATAGCTGATGAGATTGGAGTAAT--GATTCCTTTTAAGTTAACAGGGTTGGGGGGCACTTGTTGTGAGTAAGAACTGGA-CAAAGTCACAGAAGCCTAA---AACCCAGAGGCAAATGCTGTGGA--TTTACTGG----------------TTCCTGGACAT-------ACAAGTCAGCTGGTTGAGGTCATCAGCAG--CTCCTCTCAAACTGCAACATGGACAGT--GTGGCCACCATGAACATGGAGATGCTACAGAAGGTGCTGATGCAA-CTCTGAGATTTTATCCCGTAGGGG-----------------------AGACTTGACCAGTGTTGTT-GGT--ATTCCCCGTgactagcttcagctgcataaaca-gaaaccccaaacccacgtgtgtaaaacaaggcag-agta------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgttttt-gttcaggtacaggaggtgtggaggttggcatctgccactagcatgaagcttcccgtgggttca-----gggacc--AGGAGCACATCTG---------------TCCCTTCACA---------------CTACTGAAGTGGCTGCCAGAACTCTAGCCTTCGTAAATGGCCAC-------TCTCAAGCTTCTAAGGAGGTTTCCAAAAGCTCTTGGCTATTattcctggttatgtgtctttatcccaaacttagctgcctg i otoGar3.GL873611 I 6717 C 0 s canFam3.chr6 61041992 618 - 77573801 CAGATGTGGAAC------------------------CAACTGAGGAGACCAGAGAGGTGGGACTTTACATTAATCAGGTGGGGGAGGGGGACT----CGTGAGTGAAGGGTGGACCAAATCAGGGGATGTTGAGTCAGAACCAAAGACAGGTGCTGTGGA--TTTCCTGGAACACAGGAGAGATGTGTCCTGAATATCAAAGCAGCAT-------GGTCAGAGCGATCAGCTG--TTGTTCCTAGACAGCAGCCTGGAGACT-CACAGTCACCACAAAAATCGAGATGTGTTAGAGGATGCTGA----------GCAATGTTGTACTGTAGGGGGGATGGGCCTTGGGATAATCGCAAAGGTGGT-CACTGGCATTTGTT--ATTCCCTATCatttggttcagctgcatcaacaggaagccaaaataaca-ctggctgcaataagccagaagtg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cattctc-tttctggtgaaggaagcatggaagttaacattccctgcttgtatgAAATTTGCAGTGGGGTCACTAGCGAG-C---AGGAATTC-------------CTACATCCCACTGTGTGCGGCTTCTGTTTTCCCTTCCATAGTGG---------CTCCAGCCTTC--------ATATCTGGTCACTCTTTGGCTTCAAGGAGGCCTCCAGAAACTCTCAGACACCATTCCT----------------CCCCAACCTAGATGCCCA i canFam3.chr6 C 0 C 0 a score=70964.000000 s hg38.chr7_KI270899v1_alt 151252 9 + 190869 CATGCGCCG s panTro5.chr7_NW_015973580v1_random 25624 9 - 83720 CATGCGCCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541391 9 + 162613886 CATGCGCCG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 112779 9 - 432965 CATGCACCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 172963 9 + 85365473 CATGCATCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34018691 9 + 185818997 CGTGCACCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33634658 9 + 192294377 CGTGCACCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4401875 9 - 9440265 CGTGCACCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16989887 9 - 21915920 CGTGCACTG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 158414 9 - 2515279 CGTGCACCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316088 9 + 6586416 CGTGCACCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 45431 9 + 138751 CGTGCACTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 360861 9 - 2409723 CGTGCACTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524390 8 - 2125214 CATGCACT- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112638 9 + 376347 CGTGCACCG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2254321 9 - 8137123 cctacattg i otoGar3.GL873611 C 0 I 421 s canFam3.chr6 61042610 9 - 77573801 CCTGCACTG i canFam3.chr6 C 0 C 0 e chlSab2.chr28 125814 2 - 21531802 I a score=5118.000000 s hg38.chr7_KI270899v1_alt 151261 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 25633 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541400 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 112788 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 172972 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34018700 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33634667 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4401884 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16989896 1 - 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 158423 1 - 2515279 A i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316097 1 + 6586416 A i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 45440 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 360870 1 - 2409723 G i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524398 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112647 1 + 376347 G i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61042619 1 - 77573801 A i canFam3.chr6 C 0 I 1607 e otoGar3.GL873611 2254330 421 - 8137123 I e chlSab2.chr28 125814 2 - 21531802 I a score=146193.000000 s hg38.chr7_KI270899v1_alt 151262 19 + 190869 GCAAAGTTGGAGCGGGTGG s panTro5.chr7_NW_015973580v1_random 25634 19 - 83720 GCAAAGTTGGAGTGGGTGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541401 19 + 162613886 GCAAAGTTGGAGCGGGTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 112789 19 - 432965 GCAAAGTTGGAGCGGGTAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 172973 19 + 85365473 GCAAAGTTGGAGCAGGTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34018701 19 + 185818997 GCAAAGCTGGAGCAGGTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33634668 19 + 192294377 GCAAAGCTGGAGCAGGTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4401885 19 - 9440265 GCAAAGCTGGAGCAGGTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16989897 19 - 21915920 GCAAAGCTGGAGCGGGTGG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 158424 19 - 2515279 GCAAAGCTGGAGGGGGTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316098 19 + 6586416 GTAAAGCTGGAGCGGGTGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 45441 18 + 138751 GCAAAGTTGGAG-GGGTGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 360871 18 - 2409723 GCAAAGTTAGAG-GGGTGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524399 18 - 2125214 GCAAAGTTAGAG-GGGTGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112648 18 + 376347 GCAAAGTTGGAG-GGGTGG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2254330 421 - 8137123 I e canFam3.chr6 61042620 1607 - 77573801 I e chlSab2.chr28 125814 2 - 21531802 I a score=736595.000000 s hg38.chr7_KI270899v1_alt 151281 84 + 190869 AGAAGGGCCTGGCGGTGCAGAGGCCCCAGGATTTCTGGACAGGGCA--GCTGTGGCTGCAGCAGGGA------GGTGCAGTGCTG---CGGGGAG s panTro5.chr7_NW_015973580v1_random 25653 84 - 83720 AGAAGGGCCTGGCGGTGCAGAGGCCCCAGGATTTCTGGACAGGGCA--GCTGTGGCTGCAGCAGGGA------GGTGCAGTGCTG---CGGGGAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541420 84 + 162613886 AAAAGGGCCTGGCGGTGCAGAGGCCCCAGGATTTCTGGACAGGGCA--GCTGTGGCTGCAGCAGGGA------GGTGCAGTGCTG---CGGGGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 112808 84 - 432965 AGAAGGGCCCGGCGGTGCAGAGGCCCCAGGATTTCTGGACAGGGCA--GCTGTGGCTGCAGCAGGGA------GGTGCAGTGCTG---CGGGGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 172992 84 + 85365473 AGGAGGGCCTGGCGGTGCAGAGGCCCCAGGATTTCTGGACAGGGCA--GCTGTGGCTGCGGCAGGGA------GGTGCGGTGCTG---AGGGGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34018720 84 + 185818997 AGAAGGGCCTGGCAGTGCAGAGGCCCCAGGATTTCCAGACAGGGTA--GCTGTGGCCACGGCAGGGA------GGTGCAGTGCTG---GCGGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33634687 84 + 192294377 AGAAGGGCCTGGCAGTGCAGAGGCCCCAGGATTTCCAGACAGGGTA--GCTGTGGCCACGGCAGGGA------GGTGCAGTGCTG---GCGGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4401904 84 - 9440265 AGAAGGGCCTGGCAGTGCAGAGGCCCCAGGATTTCCAGACAGGGTA--GCTGTGGCCACGGCAGGGA------GGTGCAGTGCTG---GCGGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16989916 84 - 21915920 AGAAGGGCCTGGCAGTGCAGAGGCCCCAGGATTTCCAGACAGGGTA--GCTGTGGCCACGGCAGGGA------GGTGCAGTGCCG---GCGGGAG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 158443 84 - 2515279 AGAAGGGCCTGGCAGTGCAGAGGCCCCAGGATTTCCGGACAGGGTA--GCTGTGGCCACGGCAGGGA------GGTGCAGTGCTG---GCGGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316117 84 + 6586416 AGAAGGGCCTGGCAGTACAGAGGCTCCAGGATTTCCAGACAGGGCA--GCTGTGGCCGTGGCAGGGA------GGTGCAGTGCTG---GTGGGAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 45459 90 + 138751 AGAAGGGCCTGGCAGTGCAGAGGCTGCAGGATTTCTGGACAGGGCA--GCTATGGCCACAACAGGGTGTGGTGGGAGCAGTGCTG---GGGGGAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 360889 84 - 2409723 GAAAGGGCCTGGCGGTGCAGAGGCTGCAGGATTTCTTGACAGGGCA--GCGATGGCCACATCAGGGT------GGAGCAGTGCTG---GGGGGAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524417 84 - 2125214 AAAAGGGCCTGGCAGTGCAGAGGCTGCAGGATTTCTGGACAGAGCA--GCTATGGCCACATCAGGGT------GGAGCAGTGCTG---GGGGGAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112666 84 + 376347 AGAAGGGCCTGGCAGTGCAGAGGCTGCAGGATTTCTGGACGGGGCA--GCTATGGCCACATCAGGGT------GGAGCAGTGCTG---GGGGGAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2254751 86 - 8137123 AGAAGGGCCTCCTGGGGCAGAGG---CAGGATTTCCGGACCTCGCGGTGCTGTGGCCATGTTGGGGA------GGGCTGGTTCTGGGTGGGGTGG i otoGar3.GL873611 I 421 C 0 e canFam3.chr6 61042620 1607 - 77573801 I e chlSab2.chr28 125814 2 - 21531802 I a score=74095.000000 s hg38.chr7_KI270899v1_alt 151365 10 + 190869 GCGGTTGACA s panTro5.chr7_NW_015973580v1_random 25737 10 - 83720 GCGGTTGACG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541504 10 + 162613886 GCGGTTGACG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 112892 10 - 432965 GCGGTTGACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173076 10 + 85365473 GCGGTTAATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34018804 10 + 185818997 GTAGTCGATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33634771 10 + 192294377 GTAGTCGATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4401988 10 - 9440265 GTAGTCGATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990000 10 - 21915920 GTAGTCGATG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 158527 10 - 2515279 GTAGTCGATG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316201 10 + 6586416 GTGGTTGATG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 45549 10 + 138751 GTGGCTGATG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 360973 10 - 2409723 GCGGCTGACG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524501 10 - 2125214 GGGGCTGACG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112750 10 + 376347 GCGGCTGACG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2254837 10 - 8137123 GTGGTTGACT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61044227 10 - 77573801 GCGCTCGACC i canFam3.chr6 I 1607 C 0 e chlSab2.chr28 125814 2 - 21531802 I a score=430352.000000 s hg38.chr7_KI270899v1_alt 151375 39 + 190869 GCTGTCGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT s panTro5.chr7_NW_015973580v1_random 25747 39 - 83720 GCTGTCGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541514 39 + 162613886 GCTGTCGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 112902 39 - 432965 GCTGTCGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173086 39 + 85365473 GCTGTCGCCTtttgccatttccgagcccaggcaccaaat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34018814 39 + 185818997 GCTGTTGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33634781 39 + 192294377 GCTGTTGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4401998 39 - 9440265 GCTGTTGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990010 39 - 21915920 GCTGTTGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 125816 39 - 21531802 GCTGTTGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT i chlSab2.chr28 I 2 C 0 s manLeu1.NW_012101810v1 158537 39 - 2515279 GCTGTTGCCTTTTGCCACTTCTGAGCCCAGCCACCAAAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316211 39 + 6586416 GCTGTTGCCTTTTGCCACTTCTGAGTCCAGCCACCAAAT i colAng1.NW_012117710v1 C 0 I 310 s calJac3.chrUn_GL286444 45559 39 + 138751 GTTGTCACCTTGTACCCCTTCTGAGCCCAACCACCACAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 360983 39 - 2409723 GTTGTCACCTTGTACCCCTTCTGAGCCCAACCACCACAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524511 39 - 2125214 GTTGTCACCTTGTACCCCTTCTGAGCCCAACCACCACAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112760 39 + 376347 GTTGTCACCTTGTAACCCTTCTGAGCCCAACCACCACAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2254847 39 - 8137123 AGTGTGGTCTTTTATGCCTGCTGAGCCCAACCACCAAAC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61044237 39 - 77573801 TGAGTAGCCTTTTACTCCTTCTGAGCCCAGCCACCAGCC i canFam3.chr6 C 0 C 0 a score=265672.000000 s hg38.chr7_KI270899v1_alt 151414 23 + 190869 TGGTCCACG--TCTCTTAGAAAATT s panTro5.chr7_NW_015973580v1_random 25786 23 - 83720 TGGTCCACG--TCTCTTAGAAAATT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541553 23 + 162613886 TGGTCCACG--TCTCTTAGAAAATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 112941 23 - 432965 TGGTCCACG--TCTCTTAGAAAATT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173125 23 + 85365473 tggtccaag--tctcttagaaaatt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34018853 23 + 185818997 TGGTCCATA--TCTCTTAGAAAATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33634820 23 + 192294377 TGGTCCATA--TCTCTTAGAAAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402037 23 - 9440265 TGGTCCATA--TCTCTTAGAAAATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990049 23 - 21915920 TGGTCCATA--TCTCTTAGAAAATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 125855 23 - 21531802 TGGTCCACA--TCTCTTAGAAAATT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 158576 23 - 2515279 TGGTCCATA--TCTCTTAGAAAATT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316560 23 + 6586416 TGGTCCATA--TCTCTTAGAAAATT i colAng1.NW_012117710v1 I 310 C 0 s calJac3.chrUn_GL286444 45598 23 + 138751 TGGTCTACA--TCTCTTAGAAAATT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361022 23 - 2409723 TGGTTTATG--TCTCTTAGAAAATT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524550 23 - 2125214 TGGTCTATG--TCTCTTAGAAAATT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112799 23 + 376347 TGGTCTATG--TCTCTCAGAAAATT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2254886 22 - 8137123 TGGCCTATG--TCTTTT-GAAAATT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61044276 25 - 77573801 TGGTCAATGACTTTTTTAAAAAATT i canFam3.chr6 C 0 I 282 a score=611793.000000 s hg38.chr7_KI270899v1_alt 151437 67 + 190869 CTGTGACATGGCAGATTCATTGACACTCCTGGTCATAACT--GCTTCCCTTCTCCCAC-----------TAGACCAC--CTT s panTro5.chr7_NW_015973580v1_random 25809 67 - 83720 TTGTGACATGGCAGATTCATTGACACTCCTGGTCATAACT--GCTTCCCTTCTCCCAC-----------TAGACCAC--CTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541576 67 + 162613886 TTGTGACATGGCAGATTCATTGACACTCCTGGTCATGACT--GCTTCCCTTCTCCCAC-----------TAGACCAC--CTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 112964 67 - 432965 CTGTGACACTGTGGATTCATTGACACTCCTGGTCATAACC--GCTTCCCTGCTCCCAC-----------TAGACCAC--CTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173148 67 + 85365473 ctgaGACATGGTGGATTCATTGACATTCCTGGTCATAACT--GCTTCCCTCCTCCCAC-----------TAGACCAC--CTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34018876 67 + 185818997 CTGTGACACTGCGGATTCATTGACATTCCCAGTCATAACG--GCTTCCCTCCTCCCAC-----------TAGACCAC--CTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33634843 67 + 192294377 CTGTGACACTGCGGATTCATTGACATTCCCAGTCATAACG--GCTTCCCTCCTCCCAC-----------TAGACCAC--CTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402060 67 - 9440265 CTGTGACACTGCGGATTCATTGACATTCCCAGTCATAACG--GCTTCCCTCCTCCCAC-----------TAGACCAC--CTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990072 67 - 21915920 CTGTGACACTGCGGATTCATTGACATTCCCAGTCATAACG--GCTTCCCTCCTCCCAC-----------TAGACCAC--CTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 125878 67 - 21531802 CTGTGACACTGCGGATTCATTGACATTCCCGGTCATAACG--GCTTCCCTCCTCCCAC-----------TAGACCAC--CTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 158599 67 - 2515279 CTGTGACACTGCGGATTCATTGACATTCCCGGTCATAACG--GCTTCCCTCCTCCCAC-----------TAGACCAC--CTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316583 67 + 6586416 CTGTGACACTGCGGATTCATTGACATTCCCGGTCATAACG--GCTTCCCTCCTCCCAC-----------CAGAACAC--CTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 45621 66 + 138751 CTGTGGCACTGAGGATCCATTGACATCCCTGCTCATAGCT--GCTTCCCTCCTCCCGC-----------CAGA-CAC--TTT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361045 66 - 2409723 CTGTGGCACTGAGGATCCATTGACATCTCTGCTCATAGCT--GCTTCCCTCCTCCCAC-----------CAGA-CAC--TTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524573 66 - 2125214 CTGTGGCACTGAAGATCCATTGACATCCCTGCTCATAGCT--GCTTCCCTCCTCCCAC-----------CAGA-CAC--TTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112822 66 + 376347 CGGTGGCACTGAGGATCCACTGACATCCCTGCTCATAGCT--GCTTCCCTCCTCCCAC-----------CAGA-CAC--TTT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2254908 82 - 8137123 CAGTCACACTGAGGATTCTTTGAAATCTCTCATCAGAGTGGAGATCCCCTCCTCCCACGGAGGTGTCCGCAAGACACTGCCC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61044301 282 - 77573801 I a score=1315221.000000 s hg38.chr7_KI270899v1_alt 151504 146 + 190869 CCCTCCCCAGCCCCCTTTTGGTAGCACAAATACAGCTGCTGTGTGTATTGGATCCAGCAGGCGTGGATCCAATTAAACCTACACTATTTGTTTCACTTTTCTTCAGAAAGAGCCTATGAAATATGAGTTTCGGGGGCAAAGTTTTT s panTro5.chr7_NW_015973580v1_random 25876 146 - 83720 CCCTCCCCAGCCCCCTTTTGGTAACACAAATACAGCTGCTGTGTGTATTGGATCCAGCAGGCGTGGATCCTATTAAACCTACACTATTTGTTTCACTTTTCTTCAGAAAGAGCCTATGAAATATGAGTTTCGGCGGCAAAGTTTTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541643 146 + 162613886 CCCTCCCCAGCCCCCTTTTGGTAACACAAATACAGCTGCTGTGTGTATTGGATCCAGCAGGCGTGGATCCAATTAAACCTACACTATTTGTTTCACTTTTCTTCAGAAAGAGCCTATGAAATATGAGTTTCGGCGGCAAAGTTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113031 146 - 432965 CCCTCCCCAGCCCCCTTTTGGTAACACAAATATGGCTGCTGTGTGTATTGGATCCAGCAGGCGTGGATCCAATTAAACCTACACTATTTGTTTCACTTTTCTTCAGAAAGAGCCTATGAAACATGAGTTCTGGCTGCAAAGTTTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173215 146 + 85365473 CCCTCCCCAGCCCCCTTTTGGTAACATAAATACAGCTGCTGTGTGTATTGGATCCAGCAGGCGTGGATCCAATTAAACCTACATTATTTGTTTCACTTCTCTTCAGAAAGAGCCTATGGAATATGAGTTTTGGTGGCAAAGTTTTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34018943 142 + 185818997 CCCTCGCCAGCCCCCTTTTGGTAACATAAATACAGCTGCTGTGTGCATCGGATCCAGTAGGCGTGGATCCAGTTCAACCTAC----TTTGTTTCACTTTTCTTCAGGAAGAGCCTATGAAATATGAGTTTTGGTGTGAAGGTTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33634910 142 + 192294377 CCCTCGCCAGCCCCCTTTTGGTAACATAAATACAGCTGCTGTGTGCATCGGATCCAGTAGGCGTGGATCCAGTTAAACCTAC----TTTGTTTCACTTTTCTTCAGGAAGAGCCTATGAAATATGAGTTTTGGTGTGAAGGTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402127 142 - 9440265 CCCTCGCCAGCCCCCTTTTGGTAACATAAATACAGCTGCTGTGTGCATCGGATCCAGTAGGCGTGGATCCAGTTAAACCTAC----TTTGTTTCACTTTTCTTCAGGAAGAGCCTATGAAATATGAGTTTTGGTGTGAAGGTTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990139 142 - 21915920 CCCTCACCAGCCCCCTTTTGGTAACATAAATACAGCTGCTGTGTGCATCGGATCCAGCAGGCGTGGATCCAGTTAAACCTAC----TTTGTTTCACTTTTCTTCAGGAAGAGCCTATGAAATATGAGTTTTGGTGTGAAGGTTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 125945 146 - 21531802 CCCTCGCCAGCCCCCTTTTGGTAACATAAATACTGCTGCTGTGTGTATCGGATCCAGCAGGCATGGATCCAGTTAAACCTACTTTGTTTGTTTCACTTTTCTTCAGGAAGAGCCTATGAAATATGAGTTTTGGTGTGAAGGTTTTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 158666 142 - 2515279 CCCTCGCCAGCCCCCTTTTAGTAACATAAATACAGCTGCTGTGTGCATCGGATCCAGCAGGCATGGATCCAGTTAAACCTAC----TTTGTTTCACTTTTCTTCAGGAAGAACCTATGAAATATGAGTTTTGGTGTGAAGGTGTTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316650 146 + 6586416 CTCTCGCCAGTCCCCTTTTGGTAACGTAAATATGGCTGCTGTGTGTATCGGATCCAGCAGGCGTGGATCCAGTTAAACCTGCGTTGTTTGTTTCACTTTTCTTCAGAAAGAGCCTATGAAATATGAGTTTTGGTGTGAAGGTTTTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 45687 126 + 138751 ACCTTGCCAG-CCCCTTTCAGTCATATAAATACAG-------------------TGGCAGACATGGATCCAATTACAGCGACATGACTTGTTTCACTTTTCTTCAGAAAGAGCCTGTGAAATATGAGTTTTGGTGGCAAAGTTTTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361111 126 - 2409723 ACCTCTCCAG-CCCCTTTCGGTCACATAAATACGG-------------------CGGCAGGCATGGATACAATTACACCAACATGATTTGTTTCTCTTTTCTTCAGAAAGAGCCTGTGAAATACGAGTTTTGGTGGCAAAGTTTTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524639 126 - 2125214 ACCTCACCGG-CCCCTTTTGGTCACATAAATACGG-------------------CTGCAGGCATGGATCCAATTACACCGACATGATTTGTTTCACTTTTCTTCAGAAAGAGCCTGTGAAATATGAGTTTTGGTGGCAAAGTTTTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 112888 126 + 376347 ACCTCGCTGG-CCCCTTTCGGTCACACAAATACGG-------------------CAGCAGGCGTGGATCCAATCACACCAACGTGATTTGTTTCACTTTTCTTCAGAAAGAGCCTGTGAAATATGAGTTTTGGTGGCAAAGTTTTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2254990 133 - 8137123 CCTTGTCCTGCCTGCTTTT-------TAAATACAGTTGCTCTGTGT----TACCCAGCAGGTTTGGATGCCATTAAACCTAAATTA-TTGTTTTGCTTTTCTTCAGAAAGA-CCTATGAGATACGAGTTTTAAAGGCAAAGGTTTT i otoGar3.GL873611 C 0 I 2027 s canFam3.chr6 61044583 137 - 77573801 CCCTCTTACTCCCACTCCTGCTAAC----ATACAGTTATGTTGTGT----TACTCAGCTGTTAGGGA-ACAGTTAAAACTAAACTATTTGTTGCCCTTTTATTCAGGAAAGACCTATGAAATATGAATTCTAATGACAAAGTTTTG i canFam3.chr6 I 282 C 0 a score=1192950.000000 s hg38.chr7_KI270899v1_alt 151650 120 + 190869 ATCATCAGAGCTGTTCCTTT-CCAGCAGACC----TTTCAGTTCTCAGCAGCAGCCC-TTCTTTCTGGGGTAGGAACTGAGCTGGTCTG--TGGGATGCCCCGCCTCGTTCCAAATGGGGTCCAT-------CCC s panTro5.chr7_NW_015973580v1_random 26022 120 - 83720 ATCATCAGAGCTGTTCATTT-CCAACAGACC----TTTCAGTTCTCAGCAGCAGCCC-TTCTTTCTGGGGTAGGAACTGAGCTGGTCTG--TCGGATGCCCCACCTCGTTCCAAATGGGGTCCAT-------CCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541789 120 + 162613886 ATCATCAGAGCTGTTCATTT-CCAACAGACC----TTTCAGTTCTCAGCAGCAGCCC-TTCTTTCTGGGGTAGGAACTGAGCTGGTCTG--TCGGATGCCCCACCTCGTTCCAAATGGGGTCCAT-------CCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113177 121 - 432965 ATCATCAGAGCTGTTCCTTT-CCAGCAGACC----TTTCAGTTCTCAGCAGCAGCCCTTTCTTTCTGGGGTAGGAACCGAGCTGGTCTG--TCGGATGCCCCGCCTCGTTCCAAATGGGGTCCAT-------CCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173361 120 + 85365473 ATCATCAGAGCTGTTCCTTT-CCAGCAGACC----TTTCAGGTCTCAGCAGCAGCCC-TTCTTTCTGGGGTGGGAACTGAGCTGGTCTG--TCGGATGCCCCACCTTGTTCCAAATGGGGTCCAT-------CCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019085 119 + 185818997 ATCATCAGCGCCGTTCCCTT-CCAGCAGACC----TTTCAGGTCTCAGCAGCAGCCC-TTCTTTCTGGGGCGGGAACTGAGCTGGTCTG--TTGGGTGCCCCACCTTGTTCCAAAT-GGGTCTGT-------CCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635052 119 + 192294377 ATCATCAGCGCCGTTCCCTT-CCAGCAGACC----TTTCAGGTCTCAGCAGCAGCCC-TTCTTTCTGGGGCGGGAACTGAGCTGGTCTG--TTGGGTGCCCCACCTTGTTCCAAAT-GGGTCTGT-------CCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402269 119 - 9440265 ATCATCAGCGCCGTTCCCTT-CCAGCAGACC----TTTCAGGTCTCAGCAGCAGCCC-TTCTTTCTGGGGAGGGAACTGAGCTGGTCTG--TTGGGTGCCCCACCTCGTTCCAAAT-GGGTCTGT-------CCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990281 119 - 21915920 ATCATCAGCGCCGTTCCCTT-CCAGCAGACC----TTTCAGGTCTCAGCAGCAGCCC-TTCTTTCTGGGGCGGGAACTGAGCTGGTCTG--TTGGGTGCCCCACCTCGTTCCAAAT-GGGTCTGT-------CCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126091 120 - 21531802 ATCATCAGAGCCGTTCCCTTACCAGCAGACC----TTTCGGGTCTCAGCAGCAGCCC-TTCTTTCTGGGGCGGGAACTGAGCCGGTCTG--CTGGGTGCCCCGCCTCGTTCCAAAT-GGGTCCGT-------CCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 158808 119 - 2515279 ATCATCAGCGCCCTTCCCTT-CCAGCAGACC----TTTCAGGTCTCAGCAGCAGCCC-TTCTTACTGGGGCGGGAACTGAGCTGGTCTG--TTGGGTGCCCCACCTCGTTCCAAAT-GGGTCTGT-------CCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316796 119 + 6586416 ATCATCAGGGCCGTTCCCTT-CCAGCAGACC----TTTCAGGTCTCAGCAGCAGCCC-TTCTTTCTGGGGTGGGAACTGAGCCGGTCTG--TTGGGTGCCCCGCCTCGTTCCAAAT-GGGTCCGT-------CAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 45813 125 + 138751 ATCATCAGAGCTCTTCACTC-CCAGCAGACC----GTTTGGGTCTCAGCAGAAGCCC-TTCTTTCTGGGGTGGGAATTGAGCTGGTCTG--TCAGATGCCCCACCTCGTTCCAAGTGGGGCCCATC--AGGCCTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361237 129 - 2409723 ATCGTCAGAGCTCTTCACTC-CCAGCAGACCGTTTGTTTGGGTCTCAGCAGCAGCCC-TTCTTTCTGGGGTGGGAATTGAGCTGGTCTG--TCGAATGCTCCACCTCGTTCCAAATGGGGCCCATC--AGGCCTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524765 125 - 2125214 ATCATCAGAGCTCTTCATTC-CCAGCAGACC----ATTTGGGTCTCAGCAGCAGCCC-TTCTTTCTGGGGTGGGAATTGAGCTGGTCTG--TTGGATGCCCCACCTCGTTCCAAATGGGGCCCGTC--AGGCCTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 113014 125 + 376347 ATCGTCAGAGCTCTTCACTC-CCAGCAGACC----GTTTGGGTCTCCACAGCAGCCC-TTCCTTCTGGGGTGGGAATTGAGCTGGTCTG--TCGGATGCCCCACCTCGTTCCAAATGGGGCCCATC--AGGCCTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2257150 109 - 8137123 ATCATCAAAGCTGTTTGTTT-CCAGCAAATT----CTTCAGTTCTAAGCAGAATCCCCTTCTTTCTGGGGTGGAACTTGAGCTAGTCTG--TT------------TCATTACAAACTAAGTCCAT-------CCC i otoGar3.GL873611 I 2027 I 599 s canFam3.chr6 61044720 116 - 77573801 GTCATCAATGCTGTTCACTT-TCAGCAAAT-----TTTCAGGTCTCAACAGACTTCC-TTCATTATGGGG------------TGGCCTGCTTCTGACACCCATTCTTATCTCAAACTGGACCCATTGGAGGCGCC i canFam3.chr6 C 0 C 0 a score=1223951.000000 s hg38.chr7_KI270899v1_alt 151770 146 + 190869 TGAGACAAAGGCACATGATACAAAGCAAAGCCGCACAAACCTGCGGGAATCAGAGTGAGGGAGATGGAGGTGGAACAGCCACGCGGCCCGAGGAAGCAGCTACAGAATGAAGTCTGTT-----AGTTCCCATTCAGGCACCAGAGTGGGCC s panTro5.chr7_NW_015973580v1_random 26142 146 - 83720 TGAGACAAAGGCACATGATACGAAGCAAAGCCGCACAAACCTGTGGGAATCAGAGTGAGGGAGATGGAGGTAGAACAGCCACGCAGCCCAAGGAAGCAGCTACAGAATGAAGTCTGTT-----AGCTCCCATTCAGGCACCAGAGTGGGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 541909 146 + 162613886 TGAGACAAAGGCACATGATACGAAGCAAAGCCGCACAAACCTGCGGGAATCAGAGTGAGGGAGATGGAGGTAGAACAGCCACGCAGCCCAAGGAAGCAGCTACAGAATGAAGTCTGTT-----AGCTCCCATTCAGGCACCAGAGTGGGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113298 146 - 432965 TGAGACAAAGGCACATGATACGAAGCAAAGCCGCACAAACCTGCAGGAATCAGAGTGAGGGAGATGGAGGTGGAACAGCCACGCGGCCCGAGGAAGCAGCTACAGAATGAAGTCTGTT-----AGTTCCCATTCAGGCACCAGAGTGGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173481 145 + 85365473 TGAGAGAAAGGCACATGATACGAAGCAAAGCTGCAGAAACCTGCGGGAATCAGAGTGAGGGAGATGGAGGTAGAACAGCCACACGGCCCGAGGAAACAGCTACAGAATGAAGTCTGTT-----AGTTCCCATTCAGGCACCAGAGC-GGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019204 146 + 185818997 TGGGAGAAAGGCATGTGATACGAAGCAAAGCTGCACAAACCTGTGGGAATCCGGGTGAGGGAAGTAGAGGTAGATGAACCCTGCGGCCCTAGGTAGCAGCTACAGAATGAAGTCAGTT-----AGTTCCCGTCCAGGCACCAGCGTGGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635171 146 + 192294377 TGGGAGAAAGGCATGTGATACGAAGCAAAGCTGCACAAACCTGTGGGAATCCGGGTGAGGGAAGTAGAGGTAGATGAACCCTGCGGCCCTAGGTAGCAGCTACAGAATGAAGTCAGTT-----AGTTCCCGTCCAGGCACCAGCGTGGGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402388 145 - 9440265 TGGGAGAAAGGCATGTGATACGAAGCAAAGCTGCAC-AACCTGCGGGAATCCGGGTGAGGGAAGTAGAGGTAGATGAACCCTGCGGCCCTAGGTAGCAGCTACAGAATGAAGTCAGTT-----AGTTCCCGTCCAGGCACCAGCGTGGGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990400 146 - 21915920 TGGGAGAAAGGCATGTGATACGAAGCAAAGCTGCACAAACCTGCGGGAATCCGGGTGAGGGAAGTAGAGGTAGATGAACCCTGCGGCCCTAGGTAGCAGCTACAGAATGAAGTCAGTT-----AGTTCCCGTCCAGGCACCAGCGTGGGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126211 146 - 21531802 TGAGAGAAAGGCACGTGATACGAAGCAAAGCTGCACAAACCTGCGGGAATCCGAGTGAGGGAAGTGGAGGTAGACGAACCGTGTGGCCCGAGGAAGCAGCTACAGAATGAAGTCAGTT-----ACTTCCCGTTCAGGCACCAGCGTGGGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 158927 146 - 2515279 TGGGAGAAAGGCACGTGATACAAAGCAAAGCTGCACAAACCTGCGGGAATCCGGGTGAGGGAAGTAGAGGTAGATGAACCGTGCGGCCCTAGGTAGCAGCTACAGAATGAAGTCAGTT-----AGTTCCTGTCCAGGCACCGGCGTGGGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 316915 146 + 6586416 CGAGAGAAAGGCACGTGATGCAAAGCAAAGCTGCACAAACCTGCGGGAATCCGAGTGAGGGAAGTGGAGGTAGACGAACCGTGCAGCCCGAGGCAGCAGCTACAGAATGAAGTCAGTT-----AGTTCCTGTTCAGGCACCAGTGTGGGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 45938 136 + 138751 TGATGGAAATGCACATGGTTTAAAGCAATGCCACACAAACCTGGTAGAATCCAAGTGAGGGAAACAGAAGCAGAAGAATCACATGGCCCCAGCAAGCAACTCAAGAATGAAGT---------------CTGTTCAGGCACCAgagtgggcc i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361366 146 - 2409723 TGACGGAAATGCACATGGTTCAAAGCAATGCTGCACAAACCTGGTGGAATCCAAGTGagggaaacagaggcagaagaatcacgtggccccaggaattaactcgagaatgaagtctgtt-----agctcctgttcaggcgccagagtgggtc i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 524890 146 - 2125214 TGACGGAAATGCACATGGTTCAAAGCAATGCTGCACAAACCTGGTGGAATCCAAGGGaaggaaatagaggcagaagaatcacgtggccccaggacgcaactcgagaatgaagcctgtt-----agctcccgttcaggtgccagagtgggcc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 113139 146 + 376347 TGACGGAAATGCATGTGGTTCAAAGCAATGCCGCACAAACCTGGTGGAATCCAAGTGAGGGAAACAGAGGCAGAAGAATCATGCGGCCCCGGGAAGCAACTCGAGACTGAAGTCTGTT-----agctcccgttcaggcgccagagtgagcc i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61044836 120 - 77573801 TCTCAGAAACGCACACAACGTG-CGTGATGAAGCACAGACTTGAGGGGATCAAAGGGAAG------------------------------AGGAAATATCTACAGAATGACGTGTTTCTCCTGGATTCCCACCCGGCTGCCAGAGCAGGCC i canFam3.chr6 C 0 I 755 e otoGar3.GL873611 2257259 599 - 8137123 I a score=1118682.000000 s hg38.chr7_KI270899v1_alt 151916 132 + 190869 ACACATTTGCTGGT-AGCTT-CTATCGACCAGTGCAAAAAGGCGACCGAGGTCTGTGATGTCCCAGAGTGAACATGACAGAGCGCAGGGGACACTCGGGCCTGAG-CCCCCTGCCACCA------AGGAAGAGGACCTT--GA s panTro5.chr7_NW_015973580v1_random 26288 132 - 83720 ACACGTTTGCTGGT-AGCTT-CTATCGACCGGTGCAAAAAGGCGACCGAGGTCTGTGATGTCCCAGAGTGAACATGACAGAGCGCAGGGGACACTCGGGCCTGAG-CCCCCTGCCACCA------AGGAAGAGGACCTT--GA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542055 132 + 162613886 ACACATTTGCTGGT-AGCTT-CTATCGACCGGTGCAAAAAGGCGACCGAGGTCTGTGATGTCCCAGAGTGAACATGACAGAGCGCAGGGGACACTCGGGCCTGAG-CCCCCTGCCACCA------AGGAAGAGGACCTT--GA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113444 132 - 432965 ACACGTTTGCTGGT-AGCTT-CTATCGACCAGTGCAAAAAGGCGACCGAGGTCTGTGATGTCCCAGAGTGAACATGACAGAGTGCCGGGGACACTCGGGCCTGAG-CCCCCTGCCACCA------AGGAAGAGGACCTT--GA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173626 132 + 85365473 ACACGTTTGCCAGT-AGCTT-CTAGCGACCAGTGTAAAAAGGCGACTGAGGTCTGTGATGTCCCAGAGTGAACGTGACAGAGTGCAGGGGACACTCGGGCCTGAG-CCCCCTGCCACCA------AGGAAAAGGACCTT--GA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019350 138 + 185818997 ACACGTTTGCCGGT-AGCTT-CTAGAGACCAGCGCAAAAAGGCAACTGAGGTCTGTGATGTCCCAGAGTGAACGTGACACAGTGCAGAGGACACTTGGGCCTGAG-CCCCCTGCCACCAAGGAAGAGGAAGAGGACATT--GA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635317 138 + 192294377 ACACGTTTGCCGGT-AGCTT-CTAGAGACCAGCGCAAAAAGGCAACTGAGGTCTGTGATGTCCCAGAGTGAACGTGACACAGTGCAGAGGACACTTGGGCCTGAG-CCCCCTGCCACCAAGGAAGAGGAAGAGGACATT--GA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402533 138 - 9440265 ACACGTTTGCCGGT-AGCTT-CTAGAGACCAGCGCAAAAAGGCAACTGAGGTCTGTGATGTCCCAGAGTGAACGTGACACAGTGCAGAGGACACTTGGGCCTGAG-CCCCCTGCCACCAAGGAAGAGGAAGAGGACATT--GA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990546 138 - 21915920 ACACGTTTGCTGGT-AGCTT-CTAAAGACCAGCGCAGAAAGGCGACTGAGGTCTGTGATGTCCCAGAGTGAACGTGACACAGTGCAGAGGACACTTGGGCCTGAG-CCCCCTGCCACCAAGGAAGAGGAAGAGGACATT--GA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126357 130 - 21531802 ACACGTTTGCCGGT-AGCTT-CTAGAGACCAGCGCAAAACGGCAACTGAGGTCTGTGATGTCCCAGAGTGAACGTGACACAGTGCAGGGGACACTTGGGCCTGAG-CCCCCGA--ACCA------AGGAAGAGGACCTT--GA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 159073 138 - 2515279 ACACGTTTGCCGGT-AGCTT-CTAGAGACCAGCGCAAAAAGGCGACTGAGGTCTGTGATGTCCCAGAGTGAACGTGACACAGTGCAGAGGACACTTGGGCCTGAG-CCCTCTGCCACCAAGGAAGAGGAAGAGGACATT--GA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317061 133 + 6586416 ACACGTTTGCCGGT-AGCTT-CTAGAGACCAGCGCAAAACGGTGACTGAGGTCTGTGATGTCCCAGAGTGAATGTGACACAGTGCAGGGGACACTTGGGCCTGAGCCCCCCTGCCACCA------AGGAAGAGGACCTT--GA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 46074 127 + 138751 acacatttgcccttaagcttcctagtggccaatgcaaagaggTGACTGAGGTCTGTGATGCACCAGAGTGAACGTGACAG-----AGGGGATGCTCAGGCATGGG-CCACCTGCCACTA------AGAAAGAGGACCTT---- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361512 132 - 2409723 acacatttgcccgtaagcttcctagcggccaacgcaaagaggTGACTGAGGTCTGTGATGCACCAGAGTGAACGTGACAGAGTGCAGGGGATGCTCAGGCATGAG-CCACCTGCCACTA------AGAAAGAGGACCTT---- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 525036 134 - 2125214 acacatttgtccgtaagcttcctagcagccaacgcaaagaggTGACTGAGGTCTGTGATGCACCAGAGTGAACGTGACAGAATGCAGAGGATGCTTATGCATGAG-CCACCTGCCACTA------AGAAAGAGGACCTTGA-- i cebCap1.NW_016107703v1 C 0 I 51 s aotNan1.NW_018514293v1 113285 132 + 376347 acacccttgcccgtgagcttcctagcggccaacgcaaagaggTGACTGAGGTCTGTGATGCACCAGAGTGAATGTGACAGAGTGCAGGGGATGCTCAGGCATAAG-CCACCTGCCACTA------AGAAAGAGGACCTT---- i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I a score=280909.000000 s hg38.chr7_KI270899v1_alt 152048 35 + 190869 GGAAGGCATGGGTGCCACCTGTCCACTG---CACACAC s panTro5.chr7_NW_015973580v1_random 26420 35 - 83720 GGAAGGCATGGGTGCCACCTGTCCACTG---CACACAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542187 35 + 162613886 GGAAGGCATGGGTGCCACCTGTCCACTG---CACACAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113576 35 - 432965 GGAAGGCATGGGTGCCACCTGTCCACTG---CACACAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173758 35 + 85365473 GGAAGGCATGGGTGCTACCTGTCCACTG---CACACAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019488 35 + 185818997 AGAAGGCATGGGTGCCACCGGTCCACGG---CACACAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635455 35 + 192294377 AGAAGGCATGGGTGCCACCGGTCCACGG---CACACAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402671 35 - 9440265 AGAAGGCATGGGTGCCACCGGTCCACGG---CACACAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990684 35 - 21915920 AGAAGGCATGGGTGCCACCGGTCCACGG---CACACAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126487 38 - 21531802 GGAAGTCATGGGTGCCACGGGTCCACTGCACCACACAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 159211 35 - 2515279 AGAAGGCATGGGTGCCACTGGTCCATGG---CACACAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317194 35 + 6586416 GGAAGGCATGGGTGCCACCGATCCACGG---CACACAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 46201 34 + 138751 -GAAGGCATGGATGCCACCTCTGCACTG---CACACAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361644 34 - 2409723 -GAAGGCATGGATGCCACCTCTGCACTG---CACACAC i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 113417 34 + 376347 -GAAGGCATGGATGCCACCTCTGCGCTG---CACACAC i aotNan1.NW_018514293v1 C 0 I 123 e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e cebCap1.NW_016107703v1 525170 51 - 2125214 I a score=35716.000000 s hg38.chr7_KI270899v1_alt 152083 5 + 190869 AGCCC s panTro5.chr7_NW_015973580v1_random 26455 5 - 83720 AGCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542222 5 + 162613886 AGCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113611 5 - 432965 AGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173793 5 + 85365473 ATCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019523 5 + 185818997 ATCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635490 5 + 192294377 ATCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402706 5 - 9440265 ATCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990719 5 - 21915920 ATCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126525 5 - 21531802 ATCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 159246 5 - 2515279 ATCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317229 5 + 6586416 ATCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 46235 5 + 138751 ATCCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361678 5 - 2409723 ATCCC i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e cebCap1.NW_016107703v1 525170 51 - 2125214 I a score=5748.000000 s hg38.chr7_KI270899v1_alt 152088 5 + 190869 TTCT-A s panTro5.chr7_NW_015973580v1_random 26460 5 - 83720 TTCT-A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542227 5 + 162613886 TTCT-A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113616 5 - 432965 TTCT-A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173798 5 + 85365473 TTCT-A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019528 4 + 185818997 TTCT-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635495 4 + 192294377 TTCT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402711 4 - 9440265 TTCT-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990724 4 - 21915920 TTCT-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126530 4 - 21531802 TTCT-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 159251 4 - 2515279 TTCT-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317234 5 + 6586416 TTCTA- i colAng1.NW_012117710v1 C 0 I 23 e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=22704.000000 s hg38.chr7_KI270899v1_alt 152093 12 + 190869 ACG--------------------------------------------AACACGGAC s panTro5.chr7_NW_015973580v1_random 26465 56 - 83720 ACGAACACGGACCCTCACGGGCCCAGCAGGGCTCAAACACCGATTCTAACACGGAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542232 12 + 162613886 ACG--------------------------------------------AACACGGAC i panPan2.chr7 C 0 I 6 s gorGor5.CYUI01015914v1 113621 12 - 432965 ACG--------------------------------------------AACATGGAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173803 56 + 85365473 ACAAACACTGACCCTTGCAGGGCCGGCAGGGCTCAAACACTGATTCTAACACTGAC i nomLeu3.chr20 C 0 I 44 s rheMac8.chr3 34019532 12 + 185818997 ACA--------------------------------------------AACACTGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635499 12 + 192294377 ACA--------------------------------------------AACACTGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402715 12 - 9440265 ACA--------------------------------------------AACACTGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990728 12 - 21915920 ACA--------------------------------------------AACACTAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126534 12 - 21531802 ACA--------------------------------------------AACACGGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 159255 12 - 2515279 ACA--------------------------------------------AACACTGAC i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=4163.000000 s hg38.chr7_KI270899v1_alt 152105 7 + 190869 CCTCA-CG s panTro5.chr7_NW_015973580v1_random 26521 7 - 83720 CCTCA-CG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 113633 6 - 432965 TCTCA-C- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173903 7 + 85365473 CCTCA-CA i nomLeu3.chr20 I 44 C 0 s rheMac8.chr3 34019544 6 + 185818997 CCTCC-C- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635511 6 + 192294377 CCTCC-C- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402727 6 - 9440265 CCTCC-C- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990740 6 - 21915920 CCTCC-C- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126546 7 - 21531802 TCTCAGG- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 159267 6 - 2515279 CCTCC-C- i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C e panPan2.chr7 542244 6 + 162613886 I a score=158394.000000 s hg38.chr7_KI270899v1_alt 152112 39 + 190869 GGGCCCGGCGGGGCTCAGACACCGATTCTAACACAGACC s panTro5.chr7_NW_015973580v1_random 26528 39 - 83720 GGGCCGGGCGGGGCTCAGACACCGATTCTAACACGGACC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542250 39 + 162613886 GGGCCCTGCAGGGCTCAAACACCGATTCTAACACGGACC i panPan2.chr7 I 6 C 0 s gorGor5.CYUI01015914v1 113639 37 - 432965 GGGCCCAGCAGGGCTCAA--ACCGATTCTAACACGGACC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173910 39 + 85365473 GGGCCGGGCGGGGCTCAAACACCGATTCTAACACTGACC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019550 39 + 185818997 GGGCCCGGCGGGTCCCAAACACCGACTGTAACACTGACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635517 39 + 192294377 GGGCCCGGCGGGTCCCAAACACCGACTGTAACACTGACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402733 39 - 9440265 GGGCCCGGCGGGTCCCAAACACCGACTGTAACACTGACC i macNem1.NW_012019910v1 C 0 I 178 s cerAty1.NW_012002954v1 16990746 39 - 21915920 GGGCCCGGCAGGTCCCAAACACCGACTGTAACACTGACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126553 39 - 21531802 GGGCCCAGCGGGGCTCAAACACCGGTTCTAACACTGACC i chlSab2.chr28 C 0 I 54 s manLeu1.NW_012101810v1 159273 39 - 2515279 GGGCCCAGCAGGTCCCAAACACCGACTGTAACACTGACC i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=8595.000000 s hg38.chr7_KI270899v1_alt 152151 2 + 190869 CT s panTro5.chr7_NW_015973580v1_random 26567 2 - 83720 CT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542289 2 + 162613886 CT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113676 2 - 432965 CT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173949 2 + 85365473 CT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019589 2 + 185818997 CT i rheMac8.chr3 C 0 I 218 s macFas5.chr3 33635556 2 + 192294377 CT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402950 2 - 9440265 CT i macNem1.NW_012019910v1 I 178 C 0 s cerAty1.NW_012002954v1 16990785 2 - 21915920 CT i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159312 2 - 2515279 CT i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=3725.000000 s hg38.chr7_KI270899v1_alt 152153 4 + 190869 CACG s panTro5.chr7_NW_015973580v1_random 26569 4 - 83720 CACG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542291 4 + 162613886 CACG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113678 4 - 432965 CACG i gorGor5.CYUI01015914v1 C 0 I 45 s nomLeu3.chr20 173951 4 + 85365473 CGAG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33635558 4 + 192294377 GTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402952 4 - 9440265 CCCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990787 4 - 21915920 CCCA i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159314 4 - 2515279 CCCG i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e rheMac8.chr3 34019591 218 + 185818997 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=6300.000000 s hg38.chr7_KI270899v1_alt 152157 3 + 190869 GGC s panTro5.chr7_NW_015973580v1_random 26573 3 - 83720 GGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542295 3 + 162613886 GGG i panPan2.chr7 C 0 T 54 s gorGor5.CYUI01015914v1 113727 3 - 432965 GGG i gorGor5.CYUI01015914v1 I 45 C 0 s nomLeu3.chr20 173955 3 + 85365473 GGG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33635562 3 + 192294377 GGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402956 3 - 9440265 GGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990791 3 - 21915920 GGC i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159318 3 - 2515279 GGC i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e rheMac8.chr3 34019591 218 + 185818997 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=-90.000000 s hg38.chr7_KI270899v1_alt 152160 2 + 190869 CC- s panTro5.chr7_NW_015973580v1_random 26576 2 - 83720 CC- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 113730 2 - 432965 CC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173958 2 + 85365473 CC- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33635565 1 + 192294377 -C- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402959 1 - 9440265 -C- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990794 1 - 21915920 -C- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159321 2 - 2515279 -CC i manLeu1.NW_012101810v1 C 0 I 101 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e rheMac8.chr3 34019591 218 + 185818997 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C e panPan2.chr7 542298 54 + 162613886 T a score=12195.000000 s hg38.chr7_KI270899v1_alt 152162 13 + 190869 CCGCGGGGCTCAG s panTro5.chr7_NW_015973580v1_random 26578 13 - 83720 GGGCGGGGCTCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 113732 13 - 432965 GGATGGGGCTCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173960 13 + 85365473 GAATGAGGCTCAA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33635566 13 + 192294377 CAGCGGGTCCCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402960 13 - 9440265 CGGCGGGTCCCAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990795 13 - 21915920 CGGCAGGTCCCAA i cerAty1.NW_012002954v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e manLeu1.NW_012101810v1 159323 101 - 2515279 I e rheMac8.chr3 34019591 218 + 185818997 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C e panPan2.chr7 542298 54 + 162613886 T a score=20132.000000 s hg38.chr7_KI270899v1_alt 152175 10 + 190869 ACACCGATTC s panTro5.chr7_NW_015973580v1_random 26591 10 - 83720 ACACCGATTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 113745 10 - 432965 ACACTGAATC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173973 10 + 85365473 ACACCGGTTC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33635579 10 + 192294377 ACACTGACTC i macFas5.chr3 C 0 I 168 s macNem1.NW_012019910v1 4402973 10 - 9440265 ACACCGATTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990808 10 - 21915920 ACACTGACTC i cerAty1.NW_012002954v1 C 0 I 1 s manLeu1.NW_012101810v1 159424 10 - 2515279 ACACCGACCC i manLeu1.NW_012101810v1 I 101 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e rheMac8.chr3 34019591 218 + 185818997 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C e panPan2.chr7 542298 54 + 162613886 T a score=745.000000 s hg38.chr7_KI270899v1_alt 152185 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 26601 1 - 83720 T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 113755 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173983 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33635757 1 + 192294377 T i macFas5.chr3 I 168 C 0 s macNem1.NW_012019910v1 4402983 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990819 1 - 21915920 C i cerAty1.NW_012002954v1 I 1 C 0 s manLeu1.NW_012101810v1 159434 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e rheMac8.chr3 34019591 218 + 185818997 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C e panPan2.chr7 542298 54 + 162613886 T a score=25093.000000 s hg38.chr7_KI270899v1_alt 152186 9 + 190869 AACACGGAC s panTro5.chr7_NW_015973580v1_random 26602 9 - 83720 AACACGGAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 113756 9 - 432965 AACGTGGAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 173984 9 + 85365473 AACACTGAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019809 9 + 185818997 AACACTGAC i rheMac8.chr3 I 218 C 0 s macFas5.chr3 33635758 9 + 192294377 AACACTGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402984 9 - 9440265 AACACTGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990820 9 - 21915920 AACACTGAC i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159435 9 - 2515279 AACACTGAC i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C e panPan2.chr7 542298 54 + 162613886 T a score=15253.000000 s hg38.chr7_KI270899v1_alt 152195 6 + 190869 CCTCAC s panTro5.chr7_NW_015973580v1_random 26611 6 - 83720 CCTCAC i panTro5.chr7_NW_015973580v1_random C 0 I 1 s panPan2.chr7 542244 6 + 162613886 CCTCAC i panPan2.chr7 T 54 C 0 s gorGor5.CYUI01015914v1 113765 6 - 432965 CCTCAC i gorGor5.CYUI01015914v1 C 0 T 89 s nomLeu3.chr20 173993 6 + 85365473 CCTCGC i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 34019818 6 + 185818997 ACTCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635767 6 + 192294377 ACTCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402993 6 - 9440265 CCTCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990829 6 - 21915920 CCACCC i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159444 6 - 2515279 CCTCCC i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=29106.000000 s hg38.chr7_KI270899v1_alt 152201 10 + 190869 GGGCCC-CGCG s panTro5.chr7_NW_015973580v1_random 26618 10 - 83720 GGGCCG-GGCG i panTro5.chr7_NW_015973580v1_random I 1 C 0 s panPan2.chr7 542250 10 + 162613886 GGGCCC-TGCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113682 10 - 432965 GGGCCC-AGCG i gorGor5.CYUI01015914v1 T 89 C 0 s nomLeu3.chr20 174000 10 + 85365473 GGGCCG-GGCG i nomLeu3.chr20 I 1 C 0 s rheMac8.chr3 34019824 10 + 185818997 GGGCCC-GGCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635773 10 + 192294377 GGGCCC-GGCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4402999 10 - 9440265 GGGCCC-GGCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990835 10 - 21915920 GGGCCC-AGCG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159450 11 - 2515279 GGGCCCGGGGG i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 317239 23 + 6586416 I e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=102054.000000 s hg38.chr7_KI270899v1_alt 152211 24 + 190869 GGGCTCAGACACCGATTCCAACAC s panTro5.chr7_NW_015973580v1_random 26628 24 - 83720 GGGCTCAGACACCGATTCTAACAC i panTro5.chr7_NW_015973580v1_random C 0 I 493 s panPan2.chr7 542260 24 + 162613886 GGGCTCAAACACCGATTCTAACAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113692 24 - 432965 GGGCTCAAACACCGATTCTAACAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174010 24 + 85365473 GGGCTCAAACACCGGTTCTAACAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019834 24 + 185818997 GGTCCCAAACACCAATTCCAACAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635783 24 + 192294377 GGTCCCAAACACCAATTCCAACAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403009 24 - 9440265 GGTCCCAAACACCGATTCCAACAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990845 24 - 21915920 GGTCCCGAACACCGACCCTAACAC i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159461 24 - 2515279 GGTCCCAAACACCGATTCCAACAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317262 24 + 6586416 GGGCTCAAACACCGGTTCCAACAC i colAng1.NW_012117710v1 I 23 C 0 e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=221871.000000 s hg38.chr7_KI270899v1_alt 152235 81 + 190869 GGACCCTCACGGGGCCCGGCGGGGCTCAGACACCGATTCTAACACAGACCCTCA---------------------------------------------CGGGGCCCGGCGGGGCTCAGACACCGA s panTro5.chr7_NW_015973580v1_random 27145 81 - 83720 GGACCCTCACGGGGCCCGGCGGGGCTCAAACACCGATTCTAACATGGACCCTCA---------------------------------------------CGGGGCCGGACGGGGCTCAAACACCGA i panTro5.chr7_NW_015973580v1_random I 493 C 0 s panPan2.chr7 542284 81 + 162613886 GGACCCTCACGGGGCCGGGCGGGGCTCAGACACCGATTCTAACACGGACCCTCA---------------------------------------------CGGGGCCGGACGGGGCTCAAACACCGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113716 65 - 432965 GGACCCTCACGGGGCCGGATGGGGCTCAAACACTGAATCTAACGTGGACCCTCA---------------------------------------------CGGGGCCGGAC---------------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174034 126 + 85365473 TGACCCTCGCGGGGCCGGGCGGGGCTCAAACACCGATTCTAACACTGACCCTCACGGGGCCAACGGGGCTCAAACACCGGGTTCTAACACTGACCCTCGCGGGGCCGGGCGGGGCTCAAACACCGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019858 79 + 185818997 TGACCCTC-CCGGGCCCGGCGGGTCCCGAACACCGACTGTAACACTGACCCTC----------------------------------------------CCGGGCCCGGCGGGTCCCAAACACTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635807 79 + 192294377 TGACCCTC-CCGGGCCCGGCGGGTCCCGAACACCGACTGTAACACTGACCCTC----------------------------------------------CCGGGCCCGGCGGGTCCCAAACACCGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403033 79 - 9440265 TGACCCTC-CCGGGCCCGGCGGGTCCCGAACACCGACTGTAACATTGACCCTC----------------------------------------------CCGGGCCCGGCGGGTCCCAAACACCGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990869 49 - 21915920 TGACCCTC-CTAGGCCCGGCGGGTCCCGAACACCGACTGTAACACTGACC---------------------------------------------------------------------------- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159485 79 - 2515279 TGACCCTC-CCGGGCCCGGCAGGTCCCGAACACCGACTGTAACACTGACCCTC----------------------------------------------CCGGGCCCGGCGGGTCCCAAACACTGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317286 79 + 6586416 TGACCCTC-CCGGGCCCGGCAGGTCCCAAACACTGACTCCAACGCTGGCCCTC----------------------------------------------CTGGGCCCGGCGGGTCCCAAACATGGA i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e saiBol1.JH378296 361683 0 - 2409723 C e cebCap1.NW_016107703v1 525170 51 - 2125214 I e calJac3.chrUn_GL286444 46240 0 + 138751 C a score=44840.000000 s hg38.chr7_KI270899v1_alt 152316 13 + 190869 TTCTCACACGGAC s panTro5.chr7_NW_015973580v1_random 27226 13 - 83720 TTCTAACACGGAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542365 13 + 162613886 TTCTAACATGGAC i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 174160 13 + 85365473 TTCTAACACTGAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019937 13 + 185818997 CTCTAACACTGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635886 13 + 192294377 CTCTAACACTGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403112 13 - 9440265 CTCTAACACTGAC i macNem1.NW_012019910v1 C 0 C 0 s manLeu1.NW_012101810v1 159564 13 - 2515279 CTCTAACACTGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317365 13 + 6586416 TCCTAACACTGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 46240 13 + 138751 TCCTGATACTGTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361683 13 - 2409723 TCCTGATACTGTC i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2257259 599 - 8137123 I e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e cerAty1.NW_012002954v1 16990918 0 - 21915920 C e aotNan1.NW_018514293v1 113451 123 + 376347 I e cebCap1.NW_016107703v1 525170 51 - 2125214 I e gorGor5.CYUI01015914v1 113781 0 - 432965 C a score=-693.000000 s hg38.chr7_KI270899v1_alt 152329 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 27239 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542378 1 + 162613886 C i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 174173 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019950 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635899 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403125 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s manLeu1.NW_012101810v1 159577 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317378 1 + 6586416 C i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 46253 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361696 1 - 2409723 A i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2257858 1 - 8137123 C i otoGar3.GL873611 I 599 C 0 e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e cerAty1.NW_012002954v1 16990918 0 - 21915920 C e aotNan1.NW_018514293v1 113451 123 + 376347 I e cebCap1.NW_016107703v1 525170 51 - 2125214 I e gorGor5.CYUI01015914v1 113781 0 - 432965 C a score=35469.000000 s hg38.chr7_KI270899v1_alt 152330 12 + 190869 CTCACGGGCCCC- s panTro5.chr7_NW_015973580v1_random 27240 12 - 83720 CTCACGGGGCTG- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542379 12 + 162613886 CTCACGGGGCTG- i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 174174 12 + 85365473 CTCACGAGGCTG- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019951 11 + 185818997 CTCCCGGGCCC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635900 11 + 192294377 CTCCCGGGCCC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403126 11 - 9440265 CTCCCGGGCCC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990918 11 - 21915920 CTCCCGGGCCC-- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 159578 11 - 2515279 CTCCCGGGCCC-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317379 11 + 6586416 CTGACGGGCCC-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 46254 11 + 138751 CTCACGGGGCC-- i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 361697 11 - 2409723 CTCACAGAGCC-- i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 525221 11 - 2125214 CTCACGGGGTC-- i cebCap1.NW_016107703v1 I 51 I 1 s otoGar3.GL873611 2257859 12 - 8137123 TTGATGGGGCC-T i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61044956 755 - 77573801 I e chlSab2.chr28 126592 54 - 21531802 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e gorGor5.CYUI01015914v1 113781 0 - 432965 C a score=687278.000000 s hg38.chr7_KI270899v1_alt 152342 74 + 190869 GGCGGGGCTCAGACACCGAGGCT-GACACACTGCCCTGTGCACACCTGCCTGGAGCCGGTGGCGGGACCCAGGGA s panTro5.chr7_NW_015973580v1_random 27252 74 - 83720 GATGGGGCTCAAACACCGAGGCT-GACACACTGCCCTATGCACACCTGCCTGGAGCCGGTGGCGGGACCCAGGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542391 74 + 162613886 GATGGGGCTCAAACACCGAGGCT-GACACACTGCCCTATGCACACCTGCCTGGAGCCGGTGGCGGGACCCAGGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113781 71 - 432965 ---GGGGTTCAAACACCGAAGCT-GACACACTGCCCTGTGCACACCTGCCTGGAGCCAGTGGAGGGACCCAGGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174186 74 + 85365473 GATGGGGCTCAGACACCAAGGCT-GACCCACTGCCCTATGCACACCTGCCTGGAGCCAGTGAAGAGACTCAGGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34019962 74 + 185818997 AGTGGATCCCAAACACTGAGGCT-GACACACTGCCCTGTGCACACCTGCCTGGAGCCAGTGGAGAGACCCAGGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635911 74 + 192294377 AGTGGATCCCAAACACTGAGGCT-GACACACTGCCCTGTGCACACCTGCCTGGAGCCAGTGGAGAGACCCAGGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403137 74 - 9440265 AGTGGATCCCAAACACTGAGGCT-GACACACTGCCCTGTGCACACCTGCCTGGAGCCAGTGGAGAGACCCAGGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16990929 74 - 21915920 AGTGGGTCCCAAACACTGAGGCT-GACACACTGCCCTGTGCACACCTGCCTGGAGCCAGTGGAGAGACCCAGGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126646 74 - 21531802 GGCGGGTCCCAAACACCGAGGCT-GACACACTGCCCTGTGCACACCTGCCTGGAGCCGGTGGAGAGACCCAGGGA i chlSab2.chr28 I 54 C 0 s manLeu1.NW_012101810v1 159589 74 - 2515279 AGTGGGTCCCAAACACCGAGGCT-GACACACTGCCCCGTGCACACCTGCCTGGAGCCGGTGGAGAGACCCAGGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317390 74 + 6586416 AGCGGGGCTCAAACACTGAGGCT-GACACACTGCCCTGTGCACACCTGCCTAGAGTCAGTGGAGAGACCCAGGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 46266 74 + 138751 GGTGGGGCTGAAACACTGAGGCT-GACACACTGCCCTATGCACCCCTGCCTGGTGCCAGTGGAGAGACCCAGGGA i calJac3.chrUn_GL286444 I 1 I 18 s saiBol1.JH378296 361709 74 - 2409723 GGTGGGGCCGAAACACCAAGGTT-GACCCACTGCCCTATGCACCCCTGCCTGGAGCCAGTGGAGAGACCCAGGGA i saiBol1.JH378296 I 1 I 20 s cebCap1.NW_016107703v1 525233 74 - 2125214 GATGGGGCTGAAACACCAAGGCT-GACACACTGCCCTATGCACTCCTGCCTGGAGCCAGTGGAGAGACCCAGGGA i cebCap1.NW_016107703v1 I 1 I 34 s otoGar3.GL873611 2257871 75 - 8137123 GGTGGGGATCAAACACTGAGGCTAGATACACAAGCCTATATCCACCTACTTGGGGCAGGTGGAGAGACCCAGGGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113451 123 + 376347 I a score=60478.000000 s hg38.chr7_KI270899v1_alt 152416 11 + 190869 GAGACA-----GCGTG s panTro5.chr7_NW_015973580v1_random 27326 11 - 83720 GAGACA-----GAGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542465 11 + 162613886 GAGACA-----GCGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113852 11 - 432965 GGGACA-----GCGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174260 11 + 85365473 GGGACA-----GTGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020036 11 + 185818997 GGGACA-----ACGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635985 11 + 192294377 GGGACA-----ACGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403211 11 - 9440265 GGGACA-----ACGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991003 11 - 21915920 GGGACA-----ATGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126720 11 - 21531802 GGGACA-----GCATC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 159663 11 - 2515279 GGGACA-----ACGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317464 11 + 6586416 GGGACA-----GCGTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 46358 16 + 138751 GGAACATGTCTGCATC i calJac3.chrUn_GL286444 I 18 C 0 s saiBol1.JH378296 361803 16 - 2409723 GGAACATGTCCGCATC i saiBol1.JH378296 I 20 C 0 s otoGar3.GL873611 2257946 11 - 8137123 GGGACA-----GCTTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113451 123 + 376347 I e cebCap1.NW_016107703v1 525307 34 - 2125214 I a score=518830.000000 s hg38.chr7_KI270899v1_alt 152427 47 + 190869 TCCTCCAGCGTCTCCCCAGCTCCTCCGTGGTCAGTGGAGAGTCCATG s panTro5.chr7_NW_015973580v1_random 27337 47 - 83720 TCCTCCAGCGTCTCCCCAGCTCCTCCGTGGTCAGTGGAGAGTCCATG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542476 47 + 162613886 TCCTCCAGCGTCTCCCCAGCTCCTCCGTGGTCAGTGGAGAGTCCATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113863 47 - 432965 TCCTCCAGCATCTCCCCAGCTCCTCCGTGGTCAGTGGAGAGTCCATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174271 45 + 85365473 TCTTCCACCATCTCCCCAGCTCCTCCGTGGTCAGT--AGAGTCCATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020047 47 + 185818997 TTCTCCAGCATCTCCCCAGCTCCTCTGTGGTCAGTGGAGAGTCCATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33635996 47 + 192294377 TTCTCCAGCATCTCCCCAGCTCCTCTGTGGTCAGTGGAGAGTCCATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403222 47 - 9440265 TTCTCCAGCATCTCCCCAGCTCCTCTGTGGTCAGTGGAGAGTCCATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991014 47 - 21915920 TTCTCCAGCATCTCCCCAGCTCCTCTGTGGTCAGTGGAGAGTCCATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126731 47 - 21531802 TTCTCCAGCATCTCCCCAGCTCCTCTGTGGTCAGTGGAGAGTCTATG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 159674 47 - 2515279 TTCTCCAGCATCTCCCCAGCTCCTCTGTGGTCAGTGGAGAGTCCATG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 317475 47 + 6586416 TTCTCCAGCATCTCCCCAACTCCTCTGTGGTCAGTGGAGAGTCCATG i colAng1.NW_012117710v1 C 0 I 1426 s calJac3.chrUn_GL286444 46374 47 + 138751 TCCTCCAGCATCTCCCCAGCTCCTCTGTGGTCAGTGAAGAGTCCATG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361819 47 - 2409723 TCCTCCAGCATCTCCACAGCTCCTCTGTGGTCAGTGGAGAGTCCATG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 525341 47 - 2125214 TCCTCCAGCATCTCCCTAGCTCCTCTGAGGTCAGTGGAGAGTCCATG i cebCap1.NW_016107703v1 I 34 C 0 s aotNan1.NW_018514293v1 113574 47 + 376347 TCCTCCAGCATCTCCCCAGCTCCTCTGTGGTCAGTGAAGAGTCCATG i aotNan1.NW_018514293v1 I 123 C 0 s otoGar3.GL873611 2257957 47 - 8137123 TCTGTCAACTTCTCCTTGGCTCTTCTTTCATCAATGGAAATTTGATG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61044956 755 - 77573801 I a score=165917.000000 s hg38.chr7_KI270899v1_alt 152474 23 + 190869 GGAACGTTTGAGGCTTTGATCC-T s panTro5.chr7_NW_015973580v1_random 27384 23 - 83720 GGAACATTTGAGGCTTTGATCT-T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542523 23 + 162613886 GGAACATTTGAGGCTTTGATCT-T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113910 23 - 432965 GGAACATTTGAGGCTTTGATCC-T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174316 23 + 85365473 GGAACATTTGAGGCTTTGATCC-T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020094 22 + 185818997 GAAATATTCAAGGCTTTGATCC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636043 22 + 192294377 GAAATATTCAAGGCTTTGATCC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403269 22 - 9440265 GAAATATTCAAGGCTTTGATCC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991061 22 - 21915920 GAAATATTCAAGGCTTTGATCC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126778 23 - 21531802 GGAATATTCGAGGCTTTGATCCT- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 159721 23 - 2515279 GAAATATTCAAGGCTTTGATCCT- i manLeu1.NW_012101810v1 C 0 I 270 s calJac3.chrUn_GL286444 46421 23 + 138751 GGAACATTCGAGGCTTTGATTC-T i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361866 23 - 2409723 GGAACGTTCGAGGCTTTGATCC-T i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 525388 23 - 2125214 GGAACATTCGAGACTTTGATCC-T i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 113621 23 + 376347 GGAACATTCGAGGCTTTGATCC-T i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2258004 23 - 8137123 AGAGTGTTCAAAGTTTTGATCT-T i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e canFam3.chr6 61044956 755 - 77573801 I a score=9555.000000 s hg38.chr7_KI270899v1_alt 152497 1 + 190869 T s panTro5.chr7_NW_015973580v1_random 27407 1 - 83720 T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542546 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113933 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174339 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020116 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636065 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403291 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991083 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126801 1 - 21531802 T i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 46444 1 + 138751 T i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361889 1 - 2409723 T i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 525411 1 - 2125214 T i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 113644 1 + 376347 T i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2258027 1 - 8137123 T i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e canFam3.chr6 61044956 755 - 77573801 I e manLeu1.NW_012101810v1 159744 270 - 2515279 I a score=6228.000000 s hg38.chr7_KI270899v1_alt 152498 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 27408 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542547 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113934 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174340 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020117 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636066 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403292 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991084 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126802 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 525412 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 I 49 s aotNan1.NW_018514293v1 113645 1 + 376347 G i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2258028 1 - 8137123 A i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e canFam3.chr6 61044956 755 - 77573801 I e manLeu1.NW_012101810v1 159744 270 - 2515279 I e saiBol1.JH378296 361890 0 - 2409723 C e calJac3.chrUn_GL286444 46445 0 + 138751 C a score=5500.000000 s hg38.chr7_KI270899v1_alt 152499 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 27409 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542548 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113935 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174341 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020118 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636067 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403293 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991085 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 126803 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s aotNan1.NW_018514293v1 113646 1 + 376347 G i aotNan1.NW_018514293v1 C 0 I 279 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e otoGar3.GL873611 2258029 0 - 8137123 C e canFam3.chr6 61044956 755 - 77573801 I e manLeu1.NW_012101810v1 159744 270 - 2515279 I e saiBol1.JH378296 361890 0 - 2409723 C e cebCap1.NW_016107703v1 525413 49 - 2125214 I e calJac3.chrUn_GL286444 46445 0 + 138751 C a score=21664.000000 s hg38.chr7_KI270899v1_alt 152500 8 + 190869 CAAGAATA s panTro5.chr7_NW_015973580v1_random 27410 8 - 83720 CAAGAAtc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542549 8 + 162613886 CAAGAAtc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113936 8 - 432965 CAAGAAtc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174342 8 + 85365473 CAAGAAtc i nomLeu3.chr20 C 0 I 9 s rheMac8.chr3 34020119 8 + 185818997 CAAGACAC i rheMac8.chr3 C 0 I 12 s macFas5.chr3 33636068 8 + 192294377 CAAGACAC i macFas5.chr3 C 0 I 13 s macNem1.NW_012019910v1 4403294 8 - 9440265 CAAGACAC i macNem1.NW_012019910v1 C 0 I 7 s cerAty1.NW_012002954v1 16991086 8 - 21915920 CAAGACAC i cerAty1.NW_012002954v1 C 0 I 10 s chlSab2.chr28 126804 8 - 21531802 CAAGACAC i chlSab2.chr28 C 0 I 8 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e otoGar3.GL873611 2258029 0 - 8137123 C e canFam3.chr6 61044956 755 - 77573801 I e manLeu1.NW_012101810v1 159744 270 - 2515279 I e aotNan1.NW_018514293v1 113647 279 + 376347 I e saiBol1.JH378296 361890 0 - 2409723 C e cebCap1.NW_016107703v1 525413 49 - 2125214 I e calJac3.chrUn_GL286444 46445 0 + 138751 C a score=1265005.000000 s hg38.chr7_KI270899v1_alt 152508 293 + 190869 ttttttttttgagatggagtctcactctgtcgcccaggctggagtgcagagtggtgtgatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagcagggactacaggcgcccgccaccacgcctggctaattttttgtatttttagtacagacagggtttcactgtgttagccaggatggtctcaatctcctgacctcgtgatccaccctcctcggcctcccaaagtgctgggattacaggcgtgagcccccgcgcccggcc s panTro5.chr7_NW_015973580v1_random 27418 293 - 83720 ttttttttttgagacggagtctcgctctgtcgcccaggctggagtgcagagtggcgtgatctccactcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagcagggactacaggcgcccgccaccacacctggctaattttttgtatttttagtagagacagggtttcactgtgttagccaggatggtctcgatttcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542557 292 + 162613886 -tttttttttgagacggagtctcgctctgtcgcccaggctggagtgcagagtggcgtgatctccactcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagcagggactacaggcgcccgccaccacacctggctaattttttgtatttttagtagagacagggtttcactgtgttagccaggatggtctcgatttcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 113944 291 - 432965 ttttttttttgagacggagtcttgctctgtcacccaggctggagtgc--agtggcgcgatctccactcactgcaagctccgtctcccgggttcacgccattctcctgcctcagcctcctgagtagtggggactacaggcgcctgccaccacgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174359 291 + 85365473 ttttttttttgagacggagtctcgctctgtcgcccaggctggagtgc--agtggcgcaatctcggctcactgcaagctccacctcccaggttcacaccattctcctgccgcaggctcccgagtagctgggactacaggtgcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtttcgatgtcctgacctcgtgatccacccgcctcggcctctcaaagtgctgggattacaggcgtgagccgccgcgcccggcT i nomLeu3.chr20 I 9 C 0 s rheMac8.chr3 34020139 288 + 185818997 ttttttttttgagacagagtctcgctctgtcgcccaggctggagtgc--agtggcacaatctcggctcactgcaacctccacctcccaggttcaagctatt---ctacctcagcctcccgagtagctgggactacaggtgctcaccaccacgcccggctaatttttagaatttttagtagagacggggttttagcgtgttagccagaatgttctcgatctcctgacttcatgatccgcccgcctcggcctcccaaagtgctgggatgacaggtgtgagccaccggccccggcc i rheMac8.chr3 I 12 C 0 s macFas5.chr3 33636089 288 + 192294377 ttttttttttgagacagagtctcgctctgtcgcccaggctggagtgc--agtggcacaatctcggctcactgcaacctccacctcccaggttcaagctatt---ctacctcagcctcccgagtagctgggactacaggtgctcaccaccacgcccggctaatttttagaatttttagtagagacggggttttagcgtgttagccagaatgttctcgatctcctgacttcatgatccgcccgcctcggcctcccaaagtgctgggatgacaggtgtgagccaccggccccggcc i macFas5.chr3 I 13 C 0 s macNem1.NW_012019910v1 4403309 288 - 9440265 ttttttttttgagacagagtctcgctctgtcgcccaggctggagtgc--agtggcacaatctcggctcactgcaacctccacctcccagattcaagctatt---ctacctcagcctcccgagtagctgggactacaggtgctcaccaccacgcccggctaatttttagaatttttagtagagacggggttttagcgtgttagccaggatgttcttgatctcctgacttcatgatccgcccgcctcggcctcccaaagtgctgggatgacaggtgtgagccaccgtccccggcc i macNem1.NW_012019910v1 I 7 C 0 s cerAty1.NW_012002954v1 16991104 273 - 21915920 ttttttttttgagacagagtctcactctgtcgcccaggctggagtgc--agtggcacaatctcagctcactgcaacctccacctcccaagttcaagctatt---ctacctcagcctcccgagtagctgggactac---------------cgcccggctagtttttagaatttttagtagagacggggtttcagcgtgttagccagaatgttctcgatctcttgacttcatgatccgcccgcctcggcctcccaaagtgctgggatgacaggtgtgagccaccggccccggcc i cerAty1.NW_012002954v1 I 10 C 0 s chlSab2.chr28 126820 290 - 21531802 ttttttttttgagatggagtctcgctctgtcgcccaggctggagtg---agcgacgccatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccacctcgcccagctagttttttgtatttctagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggatgacaggtgtgagccactggccccagcc i chlSab2.chr28 I 8 C 0 s manLeu1.NW_012101810v1 160014 288 - 2515279 ttttttttttgagacagagtctcactctgtcgcccaggctggagtgc--agtggcacaatctcagctcactgcaacctccacctcccaggttcaagctatt---ctacctcagcctcccgagtagctgggactacaggtgctcaccaccatgcccggctaatttttagaatttttagtagagacggggtttcagcatgttagccagaatgttctcgatctcctgacttcatgatccgcctgcctcggcctcccaaagtgctgggatgacaggtgtgagccaccggccccggcc i manLeu1.NW_012101810v1 I 270 C 0 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e otoGar3.GL873611 2258029 0 - 8137123 C e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113647 279 + 376347 I e saiBol1.JH378296 361890 0 - 2409723 C e cebCap1.NW_016107703v1 525413 49 - 2125214 I e calJac3.chrUn_GL286444 46445 0 + 138751 C a score=2109.000000 s hg38.chr7_KI270899v1_alt 152801 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 27711 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542849 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 114235 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174650 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020427 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636377 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403597 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991377 1 - 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127110 1 - 21531802 A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160302 1 - 2515279 A i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 46445 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361890 1 - 2409723 G i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e otoGar3.GL873611 2258029 0 - 8137123 C e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113647 279 + 376347 I e cebCap1.NW_016107703v1 525413 49 - 2125214 I a score=304645.000000 s hg38.chr7_KI270899v1_alt 152802 49 + 190869 GCAAGAATCCTGCGTG-------CGGATGTTAAACCAGG--GGCCAAATGCAGCCAGG s panTro5.chr7_NW_015973580v1_random 27712 49 - 83720 GCAAGAATCCTGGGTG-------CAGATGTTAAACCAGG--GGCCAAATGCAGCCAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542850 49 + 162613886 GCAAGAATCCTGGGTG-------CAGATGTTAAACCAGG--GGCCAAATGCAGCCAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 114236 49 - 432965 GCAAGAATCCTGGGTG-------CAGATGTTAAACCAGG--GGCCAAATGCAGCCAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174651 50 + 85365473 GCAAGAATCCTGGGTG-------TGGATGTTAAACCGGG-CGGCCAAATGCAGCCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020428 50 + 185818997 GCAAGGATCCTGAGTG-------CAGATGTTAAACCCAG-CGGCCAAATGCAGCCAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636378 50 + 192294377 GCAAGGATCCTGAGTG-------CAGATGTTAAACCCAG-CGGCCAAATGCAGCCAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403598 50 - 9440265 GCAAGGATCCTGAGTG-------CAGATGTTAAACCCAG-CGGCCAAATGCAGCCAGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991378 50 - 21915920 GCAAGGATCCTGAGTG-------CAGATGTTAAACCCAG-CGGCCAAATGCAGCCAGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127111 57 - 21531802 GCAAGAATCCTGAGTGCTAAACCCAGATGTTAAACCCGG-CGGCCAAATGCAGCCAGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160303 50 - 2515279 GCAAGGATCCTGAGTG-------CAGATGTTAAACCCAG-CGGCCAAATGCAGCCAGC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 46446 49 + 138751 GCGAGAATCTTGGGTG--------AGATGTTAAACCCGG-TGGCCAAGTGCAGCCTAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361891 49 - 2409723 GCAAGACTCTTGAGTG--------AGATGTTAAACCCAG-TGGCCAAGTGCACCCCAC i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2258029 51 - 8137123 GCAAGAATCTTGGGTA-------TAGATGTCAAATGTGGGTGACCAAGAGCAGCCAGT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113647 279 + 376347 I e cebCap1.NW_016107703v1 525413 49 - 2125214 I a score=1832044.000000 s hg38.chr7_KI270899v1_alt 152851 265 + 190869 CTTGCACAGTGGGCTT-GTCTTCAGCAAGATGGGGgctgcctcagaatcaccaggaacgttcgataaaaatggagacttccggaacctgccctaacctactgaacagtatcgttgctggtgggtgc--------------------cctgcagtctgcatttGGCAAACTGGCATAGCGAGTCCCATGCCGTGTCGAGCCTGAGCCCCA---CGTTTCATAAGGGATTAGGGTCACTGGAGC-TCACGAGGC-CGCACCTGttcctggctgggtgcgcttgggca----ctttgc s panTro5.chr7_NW_015973580v1_random 27761 265 - 83720 CTTGCACAGTGGACTT-GTCTTCAGTAAGATGGGGGCtgcctcagaatcaccaggaacgttggataaaaatggagacttccagaacctgccctaacctgctgaacagtatcgttgctggtgggtgc--------------------cctgcagtctgcatttggcaaactggcatagcgagtcccacgccgggtcgagcctgagcccca---cGTTTCATCAGGGATTAGGGTCACTGGAGC-TCACGAGGC-CGCACCTGttcctggctggatgcgcttgggca----ctttgc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 542899 265 + 162613886 CTTGCACAGTGGACTT-GTCTTCAGTAAGATGGGGGCtgcctcagaatcaccaggaacgttggataaaaatggagacttccggaacctgccctaacctgctgaacagtatcgttgctggtgggtgc--------------------cctgcagtctgcatttGGCAAACTGGCATAGCGAGTCCCACGCCGGGTCGAGCCTGAGCCCCA---CGTTTCATCAGGGATTAGGGTCACTGGAGC-TCACGAGGC-CGCACCTGttcctggctggatgcgcttgggca----ctttgc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 114285 265 - 432965 CTTGCACAGTGGGCTT-GTCTTCAGTAAGATGGGGgctgcctcagaatcaccaggaacgttcgataaaaatggagatttccggaacctgccctaacctactgaacagtatcgttgctggtgggtgc--------------------cctgcagtctgcatttGGCAAACTGGCATAGCGAGTCCCATGCCGGGTCGAGCCTGAGCCCCA---CCTTTGATCAGGGATTAGGGTCACTGGAGC-TCACGAGGC-CGCACCTGttcctggctgggtgcgcttgggca----ctttgc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174701 238 + 85365473 CCTGCACAGTGGACTT-GTGTTCAGTAAGATGTGGgctgcctcagaatcaccaggaacattcgataaagatggagatttccggaacctgccctaacctactgaacagtatcgttgctggcgggggc--------------------cctgcagtctgcatttGGCAAGCTGGCATAGCGAGTCCCATGCCGGGTGGAGCCTGAGCCCCA---CATTTGATCAGGGATT-----------------------------CCTGTTCCTGTCTGGGTGCGCCTGGGCA----CTTTGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020478 265 + 185818997 CTCACACAGTGGATTT-GGCTTCAGTAAAATGTGGCCTgcctcagaatcaccaggaacatttgataaaaatggaggttcctggaacctgccctaacctgttgaaccgtatccttgctggtgggggc--------------------cctgcagtctgcatttggcaagctggcatcgagagtcccatgccggttcgaggctgagTCACA---CATTTGATCAGGGATTAGGGTCACTGGGGC-TCACAAGGC-CGCACCTGCTCCTGGCTGGGTGCGCTCGGTCA----CTTTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636428 265 + 192294377 CTCACACAGTGGATTT-GGCTTCAGTAAAATGTGGCCTgcctcagaatcaccaggaacatttgataaaaatggaggttcctggaacctgccctaacctgttgagccgtatccttgctggtgggggc--------------------cctgcagtctgcatttggcaagctggcatcgagagtcccatgccggttcgaggctgagTCACA---CATTTGATCAGGGATTAGGGTCACTGGGGC-TCACAAGGC-CGCACCTGCTCCTGGCTGGGTGCGCTCGGTCA----CTTTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403648 265 - 9440265 CTCACACAGTGGATTT-GGCTTCAGTaaaatgtggcctgcctcagaatcaccaggaacatttgataaaaatgaaggttcctggaacctgccctaacctgttgaaccgtatccttgctggtgggggc--------------------cctgcagtctgcatttGGCAAGCTGGCATCGAGAGTCCCATGCCGGTTCGAGGCTGAGTCACA---CATTtgatcagggattagggtcactggggc-tcacaaggc-cgcacctgctcctggctgggtgcgctcggtca----ctttgc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991428 265 - 21915920 CTCACACAGTGGATTT-GGCTTCAGTaaaatgtggcctgcctcagaatcaccaggaacatttgataaaaatggaggttcctggaacctgccctaacctgttgaaccgtatccttgctggtgggggc--------------------cccgcagtctgcatttggcacgctggcatcgcgagtcccatgccggttcgaggctgagTCACA---CATTTGATCAGGGATTAGGGTCACTGGGGC-TCACAAGGC-CGCAGCTGCTTCTGGCTGGGTGCACTCGGTCA----CTTTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127168 266 - 21531802 CTCACACAGTGGATTT-GGCTTCAGTAAGATGTGGgctgcctcagaatcaccaggaacattcgataaaaatggagattcctggaacctgccctaacctgttgaaccatatccttgctggtgggggc--------------------cccgcagtctgcatttggcaagccggcatcgcgagtcccatgccagttcgagcctgagTCACA---CATTTGATCAGGGATTAGGGTCACGGGACCTTCACAAGGC-CGCACCTGCTCCTGGCTGGGTGCACTCAGTCA----CTTTGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160353 265 - 2515279 CTCACACAGTGGATTT-GGCTTCAGTAAAATGTGGCCTgcctcagaatcaccaggaacatttgataaaaatggaggttcctggaacctgccctaacctgttgaaccgtatccttgctggtgggggc--------------------cccgcagtctgcatttggcaagctggcatcacgagtcccatgccggttcgaggctgagTCACA---CATTTGATCAGGGATTAGGGTCACTGGGGC-TCACAAGGC-TGCACCTGCTTCTGGCTGGGTGCGCTCGGTCA----CTTTGC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 46495 264 + 138751 CTTACACAGTGGATTT-GTCTTCAGTAAGATGTGGgctgtctcagaatcaccagggacatctgataaaaacacagattcccggaacccaccctaacctattgaactaaatccttgctggcaggggc--------------------cctgcgctctgcatttggcagtctcacacagcgagtcccatgctggtttgagccagaaccacA---CATTTGATCAGTGATGAGGGTCGCT-GAGC-TCACAAGGC-CACAGCTGTTCCTGGCTGGGTGCGCTTGGGCA----CGTTGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 361940 263 - 2409723 CTTACACAGTGGATTT-GTCTTCAGTAAGATGTGGgctgtctcagaatcaccagggacatctgataaaaacacagattcctggaacccgccctaacctattgaacacaatccttgctggcgggggc--------------------cctgcactctgcatttggcagcctcacacagcgagtcccatgctggtttgcgccagaaccacA---CATTTGATCAGTGATGAGGGTCACT-GAGC-TCACAAGGC-CACAGCTGTTCGTGGCTGGGTGCGCTT-GGCA----CTTTGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 525462 263 - 2125214 CTTACACAGTGGATTT-GTCTTCAGTAAGATGTGGACTGTCtcagaatcaccagggacatctgataaaaacacagattcctggaacccacgctaacctatt-aacaaaatccttgctggcggaggc--------------------cctgcgctctgcatttggcagcctcgcacagctagtcccatgctggtttgagccagaaccacA---CATTTGATCAATGATGAGGGTCACT-GAGC-TCACAAGGC-CACAGCTCTTCCTGGCTGGGTGCGCTTGGGCA----CTTTGC i cebCap1.NW_016107703v1 I 49 C 0 s otoGar3.GL873611 2258080 274 - 8137123 CCTGCACAGTAGATTTCATCTTAATAAAGATGTGGTGCGCATCAGAATCACCAGAGACATTTGATAAAA----AGACTCCTAAGACCTGTCTGAACATTCTGAATAGAATCCTTGCTGGTGGGGGAGGGGATTGGGTGGGGCATGGGCTACAATCTGCCTTTATCAAGTCCTTAT--CGAATCCAA-------------CTGAACTCAAAGGCGCCTGCTTAGTGGTGGAGATCACT-GAGT-TCACTGAGCGTGTGCCTGTCCTTCCTTGGATGATCCTAGGAAAGTCTCTTCT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e canFam3.chr6 61044956 755 - 77573801 I e aotNan1.NW_018514293v1 113647 279 + 376347 I a score=314558.000000 s hg38.chr7_KI270899v1_alt 153116 43 + 190869 ccgtctacgcctggaacttctctggtgtaa---------actggaataatat s panTro5.chr7_NW_015973580v1_random 28026 43 - 83720 ccgtctacgcctggaacttctctggtgtaa---------actggaataatat i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543164 43 + 162613886 ccgtctacgcctggaacttctctggtgtaa---------actggaataatat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 114550 43 - 432965 ctgtctacgcctggaacttctctggtgtaa---------actggaataatat i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174939 43 + 85365473 CCGTCTATGCCTGGAACTTCTTTGGTGTAA---------ACTGGAATAATAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020743 52 + 185818997 CCGTCTACGCCTGGAACTTCTCTGGTGTAAACTGGAATGACTGGAATGATAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636693 52 + 192294377 CCGTCTACGCCTGGAACTTCTCTGGTGTAAACTGGAATGACTGGAATGATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403913 52 - 9440265 ctgtctacgcctggaacttctctggtgtaaactggaatgactggaatgatat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991693 52 - 21915920 CCATCTACACCTGGAACTTCTCTGGTGTAAACTGGAATGACTGGAATGATAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127434 52 - 21531802 CCATCTACGCCTGGAACTTCTCTGGTATAAACTGGAGTGACTGGAATGATAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160618 52 - 2515279 CCATCTACGCCTGGAACTTCTCTGGTGTAAACTGGAATGACTGGAATGATAT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 46759 40 + 138751 CCATCTATGCCTGGAACTTCTCTGGTATAA---------ACTGGAATCT--- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 362203 40 - 2409723 CCATCTGTTCCTCGAACTTCTCCTGTGTAA---------ACTGGAGTAT--- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 525725 40 - 2125214 CCATCTATGCCTCGAACCTCTCTGGTGTAA---------ACTGGAATAT--- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2258354 41 - 8137123 CCATCTAAGCCTCAAATTTCTCTCTTATAA---------ATAAGAATAAT-- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61045711 43 - 77573801 CTGCCTAAGCCTCAAATTTCTCTGAGGCAA---------ACTGGAATAACAT i canFam3.chr6 I 755 C 0 e colAng1.NW_012117710v1 317522 1426 + 6586416 I e aotNan1.NW_018514293v1 113647 279 + 376347 I a score=377566.000000 s hg38.chr7_KI270899v1_alt 153159 35 + 190869 ctcctttacatggCACAGAACTAAAGATTCTTTGA s panTro5.chr7_NW_015973580v1_random 28069 35 - 83720 ctcctttacatggCACAGAACTAAAGATTCTTTGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543207 35 + 162613886 ctcctttacatggCACAGAACTAAAGATTCTTTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 114593 35 - 432965 ctcctttacatggCACAGAACTAAAGATTCTTTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 174982 35 + 85365473 CTCCTTTACACGGCACAGAACTAAGGATTCTTTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020795 35 + 185818997 CTCCTTTACATGGCATAGAACTAAAGGTTCTTTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636745 35 + 192294377 CTCCTTTACATGGCATAGAACTAAAGGTTCTTTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4403965 35 - 9440265 ctcctttacaTGGCATAGAACTAAAGGTTCTTTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991745 35 - 21915920 CTCCTTTACATGGCATAGAACTAAAGGTTCTTTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127486 35 - 21531802 TTCCTTTACATGGCATAGAACTAAAGATTCTTTGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160670 35 - 2515279 CTCCTTTACATGGCATAGAACTAAAGGTTCTTTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 318948 35 + 6586416 CTCCTTTACATGGCATAGAACTAAAGATTCTTTGG i colAng1.NW_012117710v1 I 1426 C 0 s calJac3.chrUn_GL286444 46799 35 + 138751 TTCCTTTACATGGCATAAAACTAAAGATTCTTTGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 362243 35 - 2409723 TTCCTTTACATGGCATAGAACTAAAGATTCTTTAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 525765 35 - 2125214 TTCCTTTACGTGGCATAGAACTAAAGATTCTTTGG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2258395 35 - 8137123 CTCCCTTACACGGCATAGAAGTAAAGATTTTTTGC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61045754 35 - 77573801 CTCTCTTACATGTTTTAGAACTAAAGATTCTCCTG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 113647 279 + 376347 I a score=2118442.000000 s hg38.chr7_KI270899v1_alt 153194 211 + 190869 GTTCCAGGTAATAAAAACCAAGGCCAGACTAAATCAGACAAAATGACATTTAAAACATAATAA--AGACAGGATTGCAGCTGACAGTGGA-----TCTAGAGATC--CACAGTT-CACTGGG-CCCCCACCCTGCCTGTCGCTCAGAAGTCTCCCCTCTGTGTGGCTTCACTCGCAGGCCGCTCCTCTGCACGGAGCAGCAGGGTGGCCGCCATCAGCCT--GG s panTro5.chr7_NW_015973580v1_random 28104 211 - 83720 GTTCCAGGTAATAAAAACCAAGGCCAGACTAAATCAGACAAAATGACATTTAAAACATAATAA--AGACCGGATTGCAGCTGACAGCGGA-----TCTAGAGATC--CACAGTT-CACTGGG-TCCCCACCCTGCCTGTCACTCAGAAGTCTCCCCTCTGTGTGGCTTCACTCGCAGGCCGCTCCTCTGCACGGAGCAGCAGTGTGGCCGCCATCAGCCT--GG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543242 211 + 162613886 GTTCCAGGTAATAAAAACCAAGGCCAGACTAAATCAGACAAAATGACATTTAAAACATAATAA--AGACCGGATTGCAGCTGACAGTGGA-----TCTAGAGATC--CACAGTT-CACTGGG-TCCCCACCCTGCCTGTCACTCAGAAGTCTCCCCTCTGTGTGGCTTCACTCGCAGGCCGCTCCTCTGCACGGAGGAGCAGTGTGGCCGCCATCAGCCT--GG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 114628 211 - 432965 GTTCCAGGTAATAAAAACCAAGGCCAGACTAAATCAGACAAAATGACATTTAAAACATAATAA--AGACCGGATTGCAGCTGACAGTGGA-----TCTAGAGATC--CACAGTT-CACTGGG-CCCCCACCCTGCCTGTCGCTCAGAAGTCTCCCCTCTTTGTGGCTTCACTCGCAGGCAGCTCCTCTGCATGGAGCAGCAGGGTAGCCGCCATCAGCCT--GG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 175017 213 + 85365473 GTTCCAGGTAATAAAAACCAAGGCCAGACTAAATCAGACAAAATGACATTTAAAACATAATAA--AGACCGGATTGCAGCTGACGGTGGA-----TCTAGAGATCCACACAGTT-CACTGGG-CCCCCACCCTGCCTGTCGCTCAGAAGTCTCCCCTCTGTGCGGCTTCACTCACAGGCACCTCCTCTGCAAGGAGCAGCAGGGTGGCCGCCATCAGCTT--GA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34020830 212 + 185818997 GTTCCAGGTAATAAAAACCAAGGCCAGACTACATCAGACAAAATGACATTTAAAACATAATAA--AGACCGGATTGCAGCTAACGGTGGA-----TCTAGAGATCCACACAGTT-CACTGGG-CCCCCACCCCGCCCGTCGCTCAGAAGTctcccctctgtgtggcttcactcgcaggcagctcctctacatggggcagcagggcggccgccgtcagctc---G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636780 212 + 192294377 GTTCCAGGTAATAAAAACCAAGGCCAGACTACATCAGACAAAATGACATTTAAAACATAATAA--AGACCGGATTGCAGCTAACGGTGGA-----TCTAGAGATCCACACAGTT-CACTGGG-CCCCCACCCCGCCCGTCGCTCAGAAGTctcccctctgtgtggcttcactcgcaggcagctcctctacatggggcagcagggcggccgccgtcagctc---G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404000 212 - 9440265 GTTCCAGGTAATAAAAACCAAGGCCAGACTACATCAGACAAAATGACATTTAAAACATAATAA--AGACCGGATTGTAGCTAACGGTGGA-----TCTAGAGATCCACACAGTT-CACTGGG-CCCCCACCCCGCCCATCGCTCAGAAGTCTCCCCTCTGTGTGGCTTCACTCGCAGGCAGCTCCTCTACATGGGGCAGCAGGGCAGCCGCCGTCAGCTC---G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991780 212 - 21915920 GTTCCAGGTAATAAAAACCAAGGCCAGACTACATCAGATAAAATGACATTTAAAACATAATAA--AGACCAGATTGCAGCTGACAGTGGA-----TCTAGAGATCCACACAGTT-CACTGGG-CCCCCACCCCGCCCATCGCTCAGAAGTCTCCCCTCTGTGTGTCTTCACTCGCAGGCAGCTCCTCTACACGGGGCAGCAGGGCGGCCGCCGTCAGCTC---G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127521 213 - 21531802 GTTCCAGGTAATAAAAAACAAGGCCAGACTACATCAGACACAATGACATTTAAAACATAATAA--AGACCGGATTGCAGCTGACGGTGGA-----TCTAGAGATCCACGCAGTT-CACTGGG-CCCCCACCTCGCCCATCGCTCAGAAGTCTCGcctctgtgtggcttcactcgcaggcagctcctctgcacggggcggcaaggtggccgccatcagctc--GG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160705 212 - 2515279 GTTCCAGGTAATAAAAACCAAGGCCAGACTACATCAGACAAAATGACATTTAAAACATAATAA--AGACCGGATTGCAGCTGACGGTGGA-----TCTAGAGATCCACACAGTT-CACTGGG-CCCCCACCCCGCCCATCGCTCAGAAGTctcccctctgtgtggcttcactcgcaggcagctcctctacacggggcagcagggcggccgccgtcagctc---G i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 318983 212 + 6586416 GTTCCAGGTAATAAAAACCAAGGCCAGACGAAATCAGACAAAATGACATTTAAAACATAAGAA--AGACCGGATTGCAGCTGACGGTGGA-----TCTAGAGATCCACACAGTT-CACTGGG-CCCCCACCCCGCCCATCGCTCAGAAGTCTCCCCTCTGTCTGGCTTCACTCGGAGGCAGCTCCTCTGCACGGGGCAGCAGGGCGGCCGCCGTCAGCTC---G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 46834 214 + 138751 GTTCCAAGTAATAAAAACCAAGGGCAGACTAAATCAGACAAAATGACATTTAAAACATAATAA--AGATTGAGCTGCAGCTGACAGTAGA-----TCTAGAGATCCACACAGTT-CACTGGCCCCCCCACCCCACCTGTTGCTCAGAAGCCTCCCCTCTGTGTGGTCTCACTTGCAGGCAGCTCATCTACATGGGGCAGTAGGCCGGCCACCGTCAGCTT--GG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 362278 205 - 2409723 GTTCCAAGTAATAAGAACCAAGGCCAGACTAAATCAGACAAAACG-CATTTAAAAC--AATAA--AGATTGGGCTGCAGCTGACGGTGGA-----TCTAGAGATCCACACAGTT---CTGGCTCCCCCACCCCGCCTGTTGCTCAGAAGCCTCCCCTC----TGGCCTGACTCGAAGGCAGCTCCTCTGCACGGGGCAGTAGGCTGGCCGCCATCAGCTT--GA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 525800 213 - 2125214 GTTCCAAGTAATAAAAACCAAGGCCAGACTAAATCAGACAAAATGACATTTAAAACATAATAA--AGATTGGGCTGCAGCTGACGGTGGA-----TCTAGAGATCCACACGGTT-CACTGGC-CCCCCACCCCACCTGTTGCTCAGAAGCCTCCCCTCTGTGTGGCCAGACTCGCAGGCAGCTCCTCTGCATGGGGCAGTAGGCTGGCCGCCGTCAGCTT--GG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 113926 191 + 376347 GTTCCAAGTAATAAAAACCAAGGCCAGACTAAATCAGACAAAATGACATTTAAAACATTATAA--AGATCGGGCTGCAGCTGACGGTGGA-----TCTAGAGATCCACACAGTT-CACTGGC-CCCCCACCCCGCCTGT----------------------GTGGCCTCACTCGCAGGCAGCTCCTCCGCATGGGGCAGGAGGCCGGCCGCCGTCAGCTT--GG i aotNan1.NW_018514293v1 I 279 I 89 s otoGar3.GL873611 2258430 172 - 8137123 -TTCTAAGTAATTAAAACCAAGGCCAAACTAAATTAGATAAAATGAAAGTTAAAACATAGTAA--AGATTACATTGTAGAAGAC---GGA-----ACT--AGATGCAAAGAGTT-CACTGG--CCCCCATCC--CCCATTTCTCAGA---------------------------------GCTCCTCTGTGAGTGGCAAGGAGACAGCC-CCATCCGCTCCTGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61045789 185 - 77573801 GTTCCAAGTAACAAAGATCAAAGCCAAACTACACCAGACAAAATAGAAGTTAAAGCATAATAATTGTATTGGCTTG----GGTCATTGAAAACTTCCTAGAGATCCAAACTGTGACCCTGGG---CCCACTCTGTGCATCT-----------------------GCCTCACTC--AGGAAGCTCCTC-ACA---GACAGCAGCGAGGCAGCCCTGGGCTT--G- i canFam3.chr6 C 0 C 0 a score=264637.000000 s hg38.chr7_KI270899v1_alt 153405 33 + 190869 TCTCATCTGCCCTCAGGGCTGATGGTCCTGGAC s panTro5.chr7_NW_015973580v1_random 28315 33 - 83720 GCTCATCTGCCCTCAGAGCTGATGGTCCTGGAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543453 33 + 162613886 GCTCATCTGCCCTCAGAGCTGATGGTCCTGGAC i panPan2.chr7 C 0 I 33 s gorGor5.CYUI01015914v1 114839 33 - 432965 GCTCATCTGCCCTCAGAACTGGTGGTCCTGGAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 175230 33 + 85365473 GCTCATCTGCCCTCAGAGCTGATGGTCCTGGAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021042 33 + 185818997 GCTCCTCTGCCGTCAGAGCTGACGGTCCTGGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33636992 33 + 192294377 GCTCCTCTGCCGTCAGAGCTGACGGTCCTGGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404212 33 - 9440265 GCTCCTCTGCCGTCAGAGCTGACGGTCCTGGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16991992 33 - 21915920 GCTCCTCTGCCCTCAGAGCTGACGGTCCTGGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127734 33 - 21531802 GCTCCTCTGCCCTCAGAGCTGACAGTCCTGGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160917 33 - 2515279 GCTCCTCTGCCCTCAGAGCTGACGGTCCTGGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 319195 33 + 6586416 GCTCCTCTGCCCTCAGAGCTGATGGTCCTGGAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 47048 33 + 138751 GTTCTTCCATCCTCAGAGCTGATGACCCTGGAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 362483 33 - 2409723 GTTCATCCGTCCTCAGAGCTGATGATCCTGGAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526013 33 - 2125214 GTTCATCCGTCCTCAGAGCTGATGATCCTGGAC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2258602 23 - 8137123 -CTCCATCATCCTCAGGAGAGGAG--------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61045974 24 - 77573801 ----TGTCACTCTTGGAGTTGGTGACCT----- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 114117 89 + 376347 I a score=19868.000000 s hg38.chr7_KI270899v1_alt 153438 8 + 190869 AAACAG--CT s panTro5.chr7_NW_015973580v1_random 28348 8 - 83720 AAACAG--CT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 114872 8 - 432965 AAACAG--CT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 175263 8 + 85365473 AAACAG--CT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021075 7 + 185818997 AAACAG--C- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637025 7 + 192294377 AAACAG--C- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404245 7 - 9440265 AAACAG--C- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992025 7 - 21915920 AAACAG--C- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127767 7 - 21531802 AAACAG--C- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160950 7 - 2515279 AAACAG--C- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 319228 9 + 6586416 AAGCAGCTC- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 47081 7 + 138751 AAACGG--C- i calJac3.chrUn_GL286444 C 0 I 2 s saiBol1.JH378296 362516 7 - 2409723 AAACGG--C- i saiBol1.JH378296 C 0 I 2 s cebCap1.NW_016107703v1 526046 7 - 2125214 AAATGG--C- i cebCap1.NW_016107703v1 C 0 I 2 s otoGar3.GL873611 2258625 7 - 8137123 AAATGG--C- i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61045998 2 - 77573801 ---CT----- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 114117 89 + 376347 I e panPan2.chr7 543486 33 + 162613886 I a score=209930.000000 s hg38.chr7_KI270899v1_alt 153446 31 + 190869 G----------------------------------------------------TCTCTCTGTTCATCAAACT-------TGAGTTCATAG--- s panTro5.chr7_NW_015973580v1_random 28356 31 - 83720 G----------------------------------------------------TCTCTCTGTTCATCAAACT-------TGAGTTCATAG--- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543519 31 + 162613886 G----------------------------------------------------TCTCTCTGTTCATCAAACT-------TGAGTTCATAG--- i panPan2.chr7 I 33 C 0 s gorGor5.CYUI01015914v1 114880 31 - 432965 G----------------------------------------------------TCTCTCTGTTCATCAAACT-------TGAGTTCATAG--- i gorGor5.CYUI01015914v1 C 0 I 138 s nomLeu3.chr20 175271 31 + 85365473 C----------------------------------------------------TCTCTCTGTTCATCAAACT-------TGAGTTCATAG--- i nomLeu3.chr20 C 0 I 69 s rheMac8.chr3 34021082 30 + 185818997 -----------------------------------------------------TCTCTCTGTTCCTCAGACT-------TGAGTTCACAG--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637032 30 + 192294377 -----------------------------------------------------TCTCTCTGTTCCTCAGACT-------TGAGTTCACAG--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404252 30 - 9440265 -----------------------------------------------------TCTCTCTGTTCCTCAGACT-------TGAGTTCACAG--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992032 30 - 21915920 -----------------------------------------------------TCTCTCTGTTCCTCAGACT-------TGAGTTCACAG--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127774 30 - 21531802 -----------------------------------------------------TCTCTCTGTCCCTCAGACT-------TGAGTTCACAG--- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160957 30 - 2515279 -----------------------------------------------------TCTCTCTGTTCCTCAGACT-------TGAGTTCACAG--- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 319237 30 + 6586416 -----------------------------------------------------TCTCTCTGTTCCTCAGACT-------TGAGTTCACAG--- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 47090 83 + 138751 CTCTCTGTTCCTCAAACTTGAGCTCATCAGCTGATGATCCTGGACAAATGGCTTCTCTCTGTTCCTCaaact-------tgagctcatca--- i calJac3.chrUn_GL286444 I 2 C 0 s saiBol1.JH378296 362525 31 - 2409723 C----------------------------------------------------TCTCTCTGTTCCTCAAACT-------TGAGCTCATCA--- i saiBol1.JH378296 I 2 C 0 s cebCap1.NW_016107703v1 526055 31 - 2125214 C----------------------------------------------------TCTCTCTGTTCCTCAAACT-------TGATCTCATCG--- i cebCap1.NW_016107703v1 I 2 C 0 s otoGar3.GL873611 2258633 37 - 8137123 -----------------------------------------------------GTTTTATGTTCATAAAATTCCAAAGGTGGGCGCCAAG--- i otoGar3.GL873611 I 1 I 15 s canFam3.chr6 61046000 25 - 77573801 -------------------------------------------------------------GCCCCCAGATG-------TGTGTTAATGTCAG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 114117 89 + 376347 I a score=132841.000000 s hg38.chr7_KI270899v1_alt 153477 16 + 190869 CCTTCC--AGAGGTGGCT----- s panTro5.chr7_NW_015973580v1_random 28387 16 - 83720 CCTTCC--AGCGGTGGCT----- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543550 16 + 162613886 CCTTCC--AGCGGTGGCT----- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115049 16 - 432965 CCTTCC--AGAGGTGGCT----- i gorGor5.CYUI01015914v1 I 138 C 0 s nomLeu3.chr20 175371 16 + 85365473 CCTTCC--AGAGGTGGCT----- i nomLeu3.chr20 I 69 C 0 s rheMac8.chr3 34021112 16 + 185818997 CCTTCC--AGAAGTGGCT----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637062 16 + 192294377 CCTTCC--AGAAGTGGCT----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404282 16 - 9440265 CCTTCC--AGAAGTGGCT----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992062 16 - 21915920 CCTTCC--AGAGGTGGCT----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127804 16 - 21531802 CCTTCC--AGAGGTGGCT----- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 160987 16 - 2515279 CCTTCC--AGAGGTGGCT----- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 319267 16 + 6586416 CCTTCC--AGAGGTGGCT----- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 47173 15 + 138751 -cctcc--agaggtggct----- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 362556 15 - 2409723 -CCTCC--AGAGGTGGCT----- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526086 15 - 2125214 -CCTCC--AGAGGTGGCT----- i cebCap1.NW_016107703v1 C 0 I 9 s otoGar3.GL873611 2258685 16 - 8137123 --TTCCTTAGAAAGAGCC----- i otoGar3.GL873611 I 15 I 14 s canFam3.chr6 61046025 19 - 77573801 --CCTG--GAAGATGGTCTTACT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 114117 89 + 376347 I a score=10616.000000 s hg38.chr7_KI270899v1_alt 153493 9 + 190869 -----GCAAAG-CAG s panTro5.chr7_NW_015973580v1_random 28403 9 - 83720 -----GCAAGG-CGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543566 9 + 162613886 -----GCAAAG-TGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115065 9 - 432965 -----GCAAGG-CGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 175387 9 + 85365473 -----CCAAGG-CAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021128 10 + 185818997 -----CCAAGGCCGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637078 10 + 192294377 -----CCAAGGCCGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404298 10 - 9440265 -----CCAAGGCCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992078 10 - 21915920 -----CCAAGGCCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127820 10 - 21531802 -----CCAAGGCCGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 161003 10 - 2515279 -----CCAAGGCCGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 319283 10 + 6586416 -----CCAAGGCCGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 47188 9 + 138751 ------taaggctga i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 362571 9 - 2409723 ------TAAGGTTGA i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2258715 6 - 8137123 -----TCAATG---- i otoGar3.GL873611 I 14 C 0 s canFam3.chr6 61046044 9 - 77573801 GCAGACCAA------ i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 114117 89 + 376347 I e cebCap1.NW_016107703v1 526101 9 - 2125214 I a score=22039.000000 s hg38.chr7_KI270899v1_alt 153502 3 + 190869 GCG s panTro5.chr7_NW_015973580v1_random 28412 3 - 83720 GCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543575 3 + 162613886 GTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115074 3 - 432965 GCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 175396 3 + 85365473 GCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021138 3 + 185818997 GCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637088 3 + 192294377 GCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404308 3 - 9440265 GCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992088 3 - 21915920 GCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127830 3 - 21531802 GCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 161013 3 - 2515279 GCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 319293 3 + 6586416 GCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 47197 3 + 138751 GCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 362580 3 - 2409723 GCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526110 3 - 2125214 GCA i cebCap1.NW_016107703v1 I 9 C 0 s otoGar3.GL873611 2258721 3 - 8137123 GTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61046053 2 - 77573801 GC- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 114117 89 + 376347 I a score=2440384.000000 s hg38.chr7_KI270899v1_alt 153505 285 + 190869 GTGTGCTCACCTGGGC-----------------------------------------------------------------------CGATCACAC-----------CTCTGAGGGACCGAGCGCT---CTGAG----------------GACGGTG-CCCCAGGTCACACC------------CGTGAGGGGCACACATCCCC-------------TGGGCTTCAGAGCAACGCAGCTGTGTCCTCTCCACAAGGTGAGTTTGAGGAATCTGTGCACAT-GGGAAACACAGCCTGCGTTTCTGAGAACAAGGGCTTTTCAGGTTCCCTCCCTCTAGGCCCTCCAGGCCTGGGG-G-------GACAGGTCCTGGTGCCACATTCATAGAACTACACGGCCCTGGCTCCTTCCAGGACCCA s panTro5.chr7_NW_015973580v1_random 28415 356 - 83720 GTGTGCTCACCTGGGCTGATCACACCTCTGAGAGTTCATAGCCTTCCAGAGAGGTGGCCGCAAAGTGGGTGGTGTGCTCACCTCGGCCGATCACAC-----------CTCTGAGGGACCGGGCGCT---CTGAA----------------GACGGTG-CCCCAGGTCACACC------------CGTGAGGGGCACACATCCCC-------------TGGGCTTCAGACCAATGCAGCCGTGTCCTCTCCACAAGGTGAGTTCGAGGAATCTGTGCACAT-GGGAAACACAACCTGCGTTTCTGAGAACAAGGGCTTTTCAGGGCCCCTCCCTCTAGGCCCTCCAGGCCTGGGG-G-------GACAGGTCCTGGTGCCACATTCATAGAACTGCACGGCCCTGGCTACTTCCAGGACCCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543578 285 + 162613886 GTGTGCTCACCTGGGC-----------------------------------------------------------------------TGATCACAC-----------CTCTGAGGGACCGGGCACT---CTGAA----------------GACGGTG-CCCCAGGTCACACC------------CGTGAGGGGCACACATCCCC-------------TGGGCTTCAGACCAATGCAGCCGTGTCCTCTCCACAAGGTGAGTTCGAGGAATCTGTGCACAT-GGGAAACACAACCTGCGTTTCTGAGAACAAGGGCTTTTCAGGGCCCCTCCCTCTAGGCCCTCCAGGCCTGGGG-G-------GACAGGTCCTGGTGCCACATTCATAGAACTGCACGGCCCTGGCTACTTCCAGGACCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115077 283 - 432965 GTGTGCTCACCTGGGC-----------------------------------------------------------------------CGATCACAC-----------CTCTGA-GGACCAGGCGCT---CTGAG----------------GACGGTG-CCGCAGGTCACACC------------CGTGAGGGGCACACATCCCC-------------TGGGCTTCAGACCAACGCAGCCGTGTCCTCTCCACAAGGTGAGTTCGAGGAATCTATGCACAT-GGGAAACACAGCCTGCGTTTCTGAGAACAAGGGCTTTTCAGGGCCCCTCCCTCTAGGCCCTCCAGGCCT-CGG-G-------GACAGGTCGTGGTGCCACATTCATAGAACTGCACGGCCCTGGCTACTTCCAGGACCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 175399 280 + 85365473 GTGTGCTCACCTGGGC-----------------------------------------------------------------------CGATCACAC-----------CTCTGAGGGACCGGGTGCT---CTGAG----------------GACGGTG-CCCCAGGTCACACC------------CGTGAGGGG--CACATCCCC-------------TGGGCATCA-ACCAATGCAGCCCTGTCCCCTCCACAAGGTGAGTTCGAGGAGTCTGTGCACAT-GGGAA--ACAGCCTGCGTTTCTGAGAACAAGGGCTTTTCAGGGCCCTTCCCTCTAGGCCCTCCAGGCCCCGGG-G-------GACAGGTCCTGGTGCCACATTGATAGAACTGCATGGCCCTGGCTACTTCCAGGACCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021141 280 + 185818997 GTGTGCTCGCCCGGGG-----------------------------------------------------------------------CAGTCACAC-----------CTCTGAGGGACCAGAAGCT---CTGAG----------------GA-GGTG-CCCCAGGTCACACC------------CGTGAGGGG--CACATCCCC--------------GGGCTTCAGACCAACGCAGCAGCGTCCTCTGCACAAGATGAGTTCGAGGAGTTTGTGCACAT-GGGAA-CATAGCCTGCATTTCTGAGAATGGGGATTTCTCAGGGCCCCTCCCTCTAGGCCCTCCAGGCCCCAGG-G-------GACAGGTCCTGGTGTCACATTCATAGAACTGTGCGGCCCTGGCTGCTTCCAGGACCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637091 280 + 192294377 GTGTGCTCGCCCGGGG-----------------------------------------------------------------------CAGTCACAC-----------CTCTGAGGGACCAGAAGCT---CTGAG----------------GA-GGTG-CCCCAGGTCACACC------------CGTGAGGGG--CACATCCCC--------------GGGCTTCAGACCAACGCAGCAGCGTCCTCTGCACAAGATGAGTTCGAGGAGTTTGTGCACAT-GGGAA-CACAGCCTGCATTTCTGAGAATGGGGATTTCTCAGGGCCCCTCCCTCTAGGCCCTCCAGGCCCCAGG-G-------GACAGGTCCTGGTGTCACATTCATAGAACTGTGCGGCCCTGGCTGCTTCCAGGACCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404311 280 - 9440265 GTGTGCTCGCCCGGGG-----------------------------------------------------------------------CAGTCACAC-----------CTCTGAGGGACCAGAAGCT---CTGAG----------------GA-GGTG-CCCCAGGTCACACC------------CGTGAGGGG--CACATCCCC--------------GGGCTTCAGACCAACGCAGCAGCGTCCTCTGCACAAGATGAGTTCGAGGAGTTTGTGCACAT-GGGAA-CACAGCCTGCATTTCTGAGAATGGGGACTTCTCAGGGCCCCTCCCTCTAGGCCCTCCAGGCCCCAGG-G-------GACAGGTCCTGGTGTCACATTCATAGAACTGTGCGGCCCTGGCTGCTTCCAGGACCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992091 280 - 21915920 GTGTGCTCGCCCGGGG-----------------------------------------------------------------------CAGTCACAC-----------CTCTGAGGGACCAGAAGCT---CTGAG----------------GA-GGTG-CCCCAGGTCACACC------------CGTGAGGGG--CACATCCCC--------------GGGCTTCAGACCAACGCAGCAGCGTCCTCTGCACAAGATGAGTTCGAGGAGTTTGTGCACAT-GGGAA-CACAGCCTGCGTTTCTAAGAATGGGGACTTCTCAGGGCCCCTCCCTCTAGGCCCTCTAGGCCCCAGG-G-------GACAGGTCCTGGTGTCACATTCATAGAACTGTGCGGCCCTGGCTGCTTCCAGGACCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 127833 278 - 21531802 GTGTGCTCACCCGGGC-----------------------------------------------------------------------CAGTCACAC-----------CTCCGAGGGACCAGGCGCT---CTGAG----------------GA-GGTG--CCCAGGTCACA-C------------CATGAGGGG--CACATCCCT--------------GGGCTTCAGACCAACGCAGCCGCGTCCTCTGCACAAGACGAGTTCGAGGAGTTTGTGCGCAT-GGGAA-CACAGCCTGCGTGTCTGAGAACGGCGGCTTCTCAGGGCCCCTCCCTCCAGGCCCTCCAGGCTGCAGG-G-------GACAGGTCCTGGTATCACATTCATAGAACTGTGCGGCCCTGGCTGCTTCCAGGACCCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 161016 280 - 2515279 GTGTGCTCGCCCGGGG-----------------------------------------------------------------------CAGTCACAC-----------CTCTGAGGGACCAGAAGCT---CTGAG----------------GA-GGTG-CCCCAGGTCACACC------------CGTGAGGGG--CACATCCCC--------------GGACTTCAGACCAACGCAGCAGCGTCCTCTGCACAAGATGAGTTCGAGGAGTTTGTGCACAT-GGGAA-CACAGCCTGCGTTTCTGAGAATGGGGACTTCTCAGGGCCCCTCCCTCTAGGTCCTCCAGGCCCCAGG-G-------GACAGGTCCTGGTGTCACATTCATAGAACTATGCGGCCCTGGCTGCTTCCAGGACCCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 319296 279 + 6586416 GTGTGCTCGCCCGGGG-----------------------------------------------------------------------CAGTCACAC-----------CTCCGAGGGACCAGGCGCT---CTGAG----------------GA-GGTG-CCCCAGGTCACA-T------------GGTGAGGGG--CACATTCCC--------------GGGCTTCAGACCAACGCAGCCGCGTCCTCTGCACAAGATGAGTTCGAGGAGTTTGTGCACAT-GGGAA-CACAGCCTGCGTTTCTGAGAACGGGGGCTTCTCAGGGCCCCTCCCTCTAGGCCCTCCAGGACCCAGG-G-------GACAGATCCTAGTGTCACAATCATAGAACTGTGCGGCCCTGGCTACTTCCAGGACCCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 47200 283 + 138751 GTGTGCTCACTGGGGC-----------------------------------------------------------------------CAATCATGC-----------CTCTGAGGGGACAGACACT---CTGAG----------------GACGGTG-GCCCAGGTCCCATC------------CATGAGGGT--CACATCCCC-------------TGGGCATCATACCAAAGCAGCAGCATCCTCTGCA-AGGGTGAGTTTGAGGAATTCATGCACACAGGGGA-AACAGCTGGCATTTCTGAGAACGAGGGTTTTTTAGGGCACCTCCCTCTAAGCCCTCCAGGTCCCAGGGG-------GACAGGTCCTGGTGTCACATTCACAGAACTGCAGGGCTCTGGTGAATTCCAGGACCCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 362583 280 - 2409723 GTGTGCTCACTGGGGC-----------------------------------------------------------------------CAGTCATGC-----------CTCTGAGGGGACAGACACT---CTGAG----------------GACGGTG-CCCCAGGTCCCATC------------CGTGACGGT--CACATCCCC-------------TGGGCTTCATACC-AAGCAGCAGCATCCTCTGCA-AGGGTGAGTTTGAGGAATTCATGCACACGGAGGA-AACGGCCAGCATTTCTGAGAACGAGGGTTTTTTAGGGCCCCTTCCTCTAAGCCCTCCAGGCCCCAGGGG-------GACAGGTCCTGGTGT--CATTCACAGAACTGCAGGGCTCTGGCGACTTCCAGGACCCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526113 270 - 2125214 GTGTGCTCACTGGGGC-----------------------------------------------------------------------CAATCATGC-----------CTCTGAGGGGACAGACACT---CTGAG----------------GACGGTG-CCCCAGGTCCCATC------------CATGAGGGT--CACATCCCC-------------TGGGCTTCATACCAAAGTAGCAGCATCCTCTGCA-AGGGTGAGTTTGAGGAATTCAGGCACAC-GAGGA-AACAGCCGGCATTTCTGAGAACGAGGGTTTTTTAGGGCCCCTCCCTCTAAGCCCTCCAGGCCCCAGG-------------------GGTGTCACATTCACAGAACTGCAGGGCTCTGGCGACTTCCAAGACCCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 114206 279 + 376347 GTGTGCTCACT-GGGC-----------------------------------------------------------------------CAATCATGC-----------CTCTGAGGGGACAGACACT---CTGAG----------------GACAGTG-CCCCAGGTCCCATC------------CTTGAGGGT--CACATCCCC-------------TGGGCTTCATAGCAGAGCAGCAGCAGCCCCTGCC-AGGGTGAGTTTGAGGAATTCATGCACAT-GAGG--AACAGCCGGCATTTCTGAGAATGAGGG-TTTTTAGGGCCCCTCCCTCTAAGCCCTCCAGGCCCCGGGGG-------GACAGGTCCTGGTGTCACATTCACAGAACTGCAGGGCTCTGGCGACTTCCAGGACCCA i aotNan1.NW_018514293v1 I 89 I 34 s otoGar3.GL873611 2258724 287 - 8137123 TTTTTATCATCAGAGC-----------------------------------------------------------------------TAGCCATTTTCAAGCACATACCCAGAGGGGCCAGGGGCT---CTGAGTGGCCTTAGCCCTGATGACGATG-CCCCAGGTCA----------------------AGG-------------------------GGGTTTCAGCCAGAAGCAGCACTGCCTTCTGCTCTGGGTGGGTTCCAGGAGTTTGAGCCTGT-GAAAGACACAGCTTGCGTTACTAAGAACAAAGGTTTCT--GGGCTGCTCCATCTGGGTCCTGTAGGCCCTGAG---------GATGGGTCCTGGGGCCATGTTTATACATCTGCATGCCATTGGCTGCTTCTAGGACCTA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61046055 275 - 77573801 GCGTGGCCAGAGGGAC-----------------------------------------------------------------------CAGG---AG-----------CTCGGATGGGCCAGGAGCTGCCCCAAC----------------GA-GGCGCCCCCAGATCCCACCAGGTGGCAGGGACAGAAGAGA--CAGTGCCCCAGCAGAGCTGGCCCAGGCTGCA-AGGGTCGCAGC--TGTTCTCAGCACTGCATGATTTC------------CACAC-AGGAT-------------TGCTG-----GAGGGTTT---GGTGCTGCTCCCTCGGAGCCCTTGGAGCCCTCAG-GCCCTGCAGATGGG-CCTGGT--CACATTCACAGGTCTACGTGACAGTGGC-ATTCCCAGGACACT i canFam3.chr6 C 0 C 0 a score=3108567.000000 s hg38.chr7_KI270899v1_alt 153790 362 + 190869 GAGGCCTGGACAGGAAGTGCTGGAGCAAAA-------------------GCGCTCCCATTCACACCAGATTCCACCAGCTCCTCAG---GG----GCTTCCGTCCCAGCCGGGGCGGGGGGCGGACACCT-GAGAG-----------------------------------------------GAGAGGCAGAGACCTCCCAGGAGGGTGGTGCGTGGCCCC--TCCCTACAGCCCAT--GGGACGACCGCAC-GGGAAGCCGCTGGAGAGCCG-CCACTGAGCAA-CGTGTTTTCCGTGAAATAAAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAAAAGTAGCAAAGTGTTCATTAAACTTGATACAAAGTATATATTT-AGGTG------TCTGAATGTTTCC-TGATGGAAGCATTTTCAAG s panTro5.chr7_NW_015973580v1_random 28771 362 - 83720 GAGGCCTGGACAGGAGGTGCTGGAGCAAAA-------------------GCGTTCCCATTCACACCGGATTCCACCAGCTCCTCAG---GG----GCTTCCGTCCCAGCCGGGGCGGGGGGCGGACACCT-GAGTG-----------------------------------------------GAGAGGCAGAGACCTCCCAGGAGGGTGGTGCGTGGCCCC--TCCTTACAGCCCAT--GGGACGACCGCAC-GGGAAGCCCCTGGAGAGCGG-CCACCGAGCAA-CGTGTTTTCCGTGAAATAAAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAAAAGTAGCAAAGTGTTCATTAAACTTGATACAAAGTATATATTT-AGGTG------TCTGAATGTTTCC-TGATGGAAGCATTTTCAAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 543863 362 + 162613886 GAGGCCTGGACAGGAGGTGCTGGAGCAAAA-------------------GCGTTCCCATTCACACCGGATTCCACCAGCTCCTCAG---GG----GCTTCCGTCCCAGCCGGGGCTGGGGGCGGACACCT-GAGTG-----------------------------------------------GAGAGGCAGAGACCTCCCAGGAGGGTGGTGCGTGGCCCC--TCCTTACAGCCCAT--GGGACGACCGCAC-GGGAAGCCCCTGGAGAGCGG-CCACCGAGCAA-CGTGTTTTCCGTGAAATAAAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAAAAGTAGCAAAGTGTTCATTAAACTTGATACAAAGTATATATTT-AGGTG------TCTGAATGTTTCC-TGATGGAAGCATTTTCAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115360 362 - 432965 GAGGCCTGGACAGGAGGTGATGGAGCAAAA-------------------GCGTTCCCATTCACACCGGATTCCACCAGCTCCTCAG---GG----TCTTCCGTCCCAGCCGGGGCGGGGGGCGGACACCT-GAGTG-----------------------------------------------GAGAGGCAGAGACCTCCCAGGAGGGTGGTGCGTGGCCCC--TCCCTACAGCCCAT--GGGACGACCGCAC-GGGAAGCCGCTGGAGAGCGG-CTACTGAGCAA-CGTGTTTTCCGTGAAATAAAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAAAAGTAGCAAAGTGTTCATTAAACTTGGTACAAAGTATATATTT-AGGTG------TCTGAATGTTTCC-TGATGGAAGCATTTTCAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 175679 355 + 85365473 GAGACCTGGGCAGGAGGTGCTGGAGCAAAA-------------------GCGTTCCCATTCACACCCGATTCTACCAGCTCCTCAG---GG----GCTTCCATCCCAGCTGGGGTGGGGGGCGGACACCT-GAGTG-----------------------------------------------GAGAGGCAGAGACCTCCCAGGAGGGTGGTGCGTGGCCCC--TCCCTACAGCCCAC--------ACTGCGC-GGGAAGCAGCTGGAGAGAGG-CCA-TGAGCAA-CGTGTTTTCTGTGAAATAAAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCACAGTCATCAAAAGTAGCAAAGTGTTCATTAAACTTGATACAAAGTATATATTT-AGGTG------TCTGCATGTTTCC-TGATGGAAGCATTTTCAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021421 353 + 185818997 GAGACCTGGACAG---GTGCTGGAGCAGAA-------------------GCGTTCCTGTTCACACCCGATTCCACCAGCTCCTCAG---GG----GCGTCCGTCCTGGCTGGGGCAGGCGGTGGACACCT-GAGCG-----------------------------------------------GTGAGGCAGGGACCTCCCATGAGGGTGGTGCGTGGCCCC--TCCCTGCAACCCGC----GGTGACTGCAC-GGGAAGTGGCTGGAGAGCGG-CCACCGGGCGA-CGTGTTTTCTGTGAAATAGAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAGAAGTAGCAAAGTGCTCATTAAACTTGACACAAAGTGTATATTT-AGGTG------T----CTGTTTTC-TGATGGAAGCATTTTCAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637371 353 + 192294377 GAGACCTGGACAG---GTGCTGGAGCAGAA-------------------GCGTTCCTGTTCACACCCGATTCCACCAGCTCCTCAG---GG----GCGTCCGTCCTGGCTGGGGCAGGCGGTGGACACCT-GAGCG-----------------------------------------------GTGAGGCAGGGACCTCCCATGAGGGTGGTGCGTGGCCCC--TCCCTGCAACCCGC----GGTGACTGCAC-GGGAAGTGGCTGGAGAGCGG-CCACCGGGCGA-CGTGTTTTCTGTGAAATAGAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAGAAGTAGCAAAGTGCTCATTAAACTTGACACAAAGTGTATATTT-AGGTG------T----CTGTTTTC-TGATGGAAGCATTTTCAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404591 353 - 9440265 GAGACCTGGACAG---GTGCTGGAGCAGAA-------------------GCGTTCCTGTTCACACCCGATTCCACCAGCTCCTCAG---GG----GCGTCCGTCCTGGCTGGGGCAGGCGGTGGACACCT-GAGCG-----------------------------------------------GTGAGGCAGGGACCTCCCACGAGGGTGGTGCATGGCCCA--TCCCTGCAACCCGC----GGTGACTGCAC-GGGAAGCGGCTGGAGAGCGG-CCACCGGGCGA-CGTGTTTTCTGTGAAATAGAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAGAAGTAGCAAAGTGCTCATTAAACTTGACACAAAGTGTATATTT-AGGTG------T----CTGTTTTC-TGATGGAAGCATTTTCAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992371 357 - 21915920 GAGACCTGGACAG---GTGCTGGAGCAGAA-------------------GCGTTCCCATTCACACCCGATTCCACCAGCTCCTCAG---GG----GCTTCCATCCTGGCTGGGGCAGGCAGTGGACACCT-GAGCG-----------------------------------------------GTGAGGCAGGGACCTCCCATGAGGGTGGTGCGTGGCCCC--TCCCTGCAGCCTGC----GGTGACTGCAC-GGGAAGCGGCTGGAGAGCGG-CCACCGGGCGA-CGTGTTTTCTGTGAAATAGAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAGAAGTAGCCAAGTGCTCATTAAACTTGACACAAAGTGTATATTT-AGGTG------TCTGACTGTTTTC-TGATGGAAGCATTTTCAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 128111 364 - 21531802 GAGACCTGGACAG---GTGCTGGAGCAGAA-------------------GCGTTCCCGTCCACACCCGATTCCACCAGCTCCTCAG---GG----GCTTCTGTCCCTGCTGGGGCGGGCGGTGGACACCT-GAGCG-----------------------------------------------CTGAGGCGGGGACCTCCCACGAGGGTGGTGCGTGGCCCC--TCCCTGCAGCCCGC---GGGCGACTACTC-GGGAAGCGGCTGGAGAGCGG-CCACCGGGCGA-CGTGTTTTCTGTGAAATGGAACTAAAAGGTTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAAAAGTAGCAAAGTGCTCATTAAACTCGATGCAAAGTGTGTATTT-AGGTGTCTGAATCTGACTGTTTTC-TGAGGGAAGCATTTTCAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 161296 357 - 2515279 GAGACCTGGACAG---GTGCTGGAGCAGAA-------------------GCGTTCCCATTCACACCCGATTCCACCAGCTCCTCAG---GG----GCTTCCGTCCCGGCTGGGGCAGGCGGTGGACACCT-GAGCG-----------------------------------------------GTGAGGCAGGGACCTCCCATGAGGGTGGTGCGTGGCCCC--TCCCTGCAGCCTGC----GGTGACTGCAC-GGGAAGCGGCTGAAGAGCGG-CCACCGGTCGA-CGTGTTTTCTGTGAAATAGAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAGAAGTAGCAAAGTGCTCATTAAACTTGACACAAAGTGTATATTT-AGGTG------TCTGACTGTTTTC-TGATGGAAGCATTTTCAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 319575 400 + 6586416 GAGACCTGGACAG---GTGCTGGAGCAGAA-------------------GCATTCCCGTCCACACCCGATTCCACCAGCTCCTCAG---GG----GCTTCCGTCCCAGCGGGGGCAGGCGGTGGACACCT-GAGCGGTGAGGCAGGGACGTCCCAGCGGGGGCGGGCAGTGGACACCTGAGCAGTGAGGCAGGGACCTCCCACGGGGGTGGTGCGTGGCCCC--TCCCTGCAGACCGT----GGCGACTGCGT-GGGAAGCGGCTGGAGAGCGG-CCACCGGGCAA-CGTGTTTTCTGTGAAATAGAACTAAAAGGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTCATCAAAAGTAGCAAAGTGCTCATTAAACTTGACACAAAGTGTATATTT-AGGTG------T----CTGTTTTC-TGATGGAAGCATTTTCAAG i colAng1.NW_012117710v1 C 0 I 51 s calJac3.chrUn_GL286444 47483 357 + 138751 GAGACCTGGACAGGAGGTGCTAGGGCAAAA-------------------GCATTCCCATGCACACCCAATTCCACTGGCTCCTCAA---GG----GCTTCCATCCCAGCTTCAGTGAGTGGCAGACACCT-GAGTG------------------------------------------------TGAGGCAGAGACCTCCCATGAGGTTAGCACACCGCCCT--TCCCCACAGCCCAT--GGGATGACTGCACAGAGAGGCTGCTGGAGAGCAG-ACACTGAGCA--CGTGTTTTCTGTGA-----AACGAAAAAGCTCCTGGTCTCTGTTAAC---CCGGGAGATAAAGAAATCATGGTTATCAAAGGTAGTCAAGTGTTCATTAAACTGGATACAAAGTATATATTTAAGGTG------TCTGAATGTTACC-TGATGGAAGCATTTTAATG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 362863 347 - 2409723 GAGACCTGGACAGGAGGTGCTAGAGCAAAA-------------------GCATT----------CCCAATTCCACCGGCTCCTCAA---GG----GCTTCTGTCCCAGCTTCGGTGAATGGCGGCCACCC-GAGTG------------------------------------------------TGAGGCAGAGACTCCCCATGAGGTCAGCACACGGCCCT--TCCCCACAGCCCAT--GGGATGACCGCACAGAGAGGCTGCTGGAGAGCAG-ACACTGAGAG--CGTGTTTTCTGTGA-----AAAGAGAAAGCTCCTGGTCTCTGTTCAC---CAGGTAGATAAAGAAATCATGGTTATCAAAGGTAGTCAAGGGTTCATTAAACTGGATACAAAGTATATATTTAAGGTG------TCTGAATGTTTCC-TGATGGAAGCATTTTCAAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526383 358 - 2125214 GAGACCTGGATAGGAGGTGCTAGAGCAAAA-------------------GCATTCCCATGCACACCTGATTCCACTGGCTCCTCAA---GG----ACTTCCATCCCAGCTTTGGTGAGTGGCAGACACCT-GGGTG------------------------------------------------TGGGACAGAGACCTCCCATGAGGTCAGCGCACAGCCCT--TCCCCACAGCCCAT--GGGATGACTGCACAGAGAGGTTGCTTGAGAGCAG-ACACTGAGCG--CGTGTTTTCTGTGA-----AACCAAAAAGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATGGTTATCAAAGGTAGTCAAGTGTTCATTAAACTGGATACAAAGTATATATTTAAGGTG------TCTGAATGTTTCCTTGATGGAAGCATTTTCAAG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2259011 374 - 8137123 GATTCTTGGGCTT---AGGCTGGAGCAAAAGCAGAAATAGTCCCTCCTGGCGTTCACATTCAGGCCT-ATGCTAACAGCTCTTGAG---GGTGGAGCTTATGTT-------GGGTCTGTAGGGGGCATCT-GAGCA-----------------------------------------------TGGTGGTAGCAACCTCC--ACAGGGT-GTGTGTGGCCCC-TTCCCTACAGCCTAC-AGGGAAGATTGTGCTGGGCAACCGCTGGAGAAGGA-CCTCTGAGCGA-CACTTTATCTGTGAGATAAAAATAAAAAGCTCCTGGTCTCTGTTTAC---CAGGTAGATAAAGAAATCATAGTTATCA-AGGAAGCAAAGTGTTCATTAAACTTGCTGCAAAGTGTATATTTAAAGTG------TCTGAGAGTTTCC-TGATGGAAGCACTTTCAAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61046330 371 - 77573801 CGGGCCTGAGTGGGAGATGCTGGAGCAAAG-------------------ACTCTCACACTCACTTCTGATTCTAGTGGCTCCTCAGGTAGG----TTTCCCGTCCCTGCTGGATGTGGGGGTAGGTACCCGGAGTG-------------------------------------------------GAGGCAGAGACCTCTCGCAAGGGT-ATGCATTGCCCCCTCCCCTGACGCCCGCCAGAGATG-TTGTAC-TGGCAGCCCCTGGAGAAGGGTCCACTGAGCAATCTTTTATTCTGCGAAGTAAAAATTAAAAGC-CCAGGTCCCTGTTTACAGGAAGGTAAAAAAAAAAATCATAGTTTTCAATGACAGCAAAGTAGTCATTTAACTCGATACGAGCTGTATACTTACAGTG------TCTGAATGTTTCC-TGATGGAAGCGTTTTCCAG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 114485 34 + 376347 I a score=120401.000000 s hg38.chr7_KI270899v1_alt 154152 18 + 190869 GGCATTTGCCTCAGCT----------------------AT s panTro5.chr7_NW_015973580v1_random 29133 18 - 83720 GGCATTTGACTCAGCT----------------------AT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544225 18 + 162613886 GGCATTTGACTCAGCT----------------------AT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115722 18 - 432965 GGCATTTGACTCAGCT----------------------AT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 176034 40 + 85365473 GGCACTTTACTCAGCTAGTGTTTTCGTTGACTTCTTGCAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021774 18 + 185818997 GGCTTTTCACTCAGCT----------------------AG i rheMac8.chr3 C 0 I 22 s macFas5.chr3 33637724 18 + 192294377 GGCTTTTCACTCAGCT----------------------AG i macFas5.chr3 C 0 I 22 s macNem1.NW_012019910v1 4404944 18 - 9440265 GGCTTTTCACTCAGCT----------------------AG i macNem1.NW_012019910v1 C 0 I 22 s cerAty1.NW_012002954v1 16992728 18 - 21915920 GGCTTTTCACTCAGCT----------------------AG i cerAty1.NW_012002954v1 C 0 I 22 s chlSab2.chr28 128475 18 - 21531802 GGCTTTTCACTCAGCT----------------------GT i chlSab2.chr28 C 0 I 33 s manLeu1.NW_012101810v1 161653 18 - 2515279 GGCTTTTCACTCAGCT----------------------AG i manLeu1.NW_012101810v1 C 0 I 22 s calJac3.chrUn_GL286444 47840 18 + 138751 GGTGTTTCACTCAGCT----------------------AC i calJac3.chrUn_GL286444 C 0 I 22 s saiBol1.JH378296 363210 18 - 2409723 GGCGTTTCACTCAGCT----------------------AC i saiBol1.JH378296 C 0 I 22 s cebCap1.NW_016107703v1 526741 18 - 2125214 GGTGTTTCACTCAGCT----------------------AC i cebCap1.NW_016107703v1 C 0 I 22 s otoGar3.GL873611 2259385 18 - 8137123 GACACTCGGCCCAGCT----------------------GC i otoGar3.GL873611 C 0 I 22 s canFam3.chr6 61046701 18 - 77573801 GGCATTTCTCTCAGCT----------------------GC i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 319975 51 + 6586416 I e aotNan1.NW_018514293v1 114485 34 + 376347 I a score=12277.000000 s hg38.chr7_KI270899v1_alt 154170 3 + 190869 -GGG s panTro5.chr7_NW_015973580v1_random 29151 3 - 83720 -GGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544243 3 + 162613886 -GGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115740 3 - 432965 -GGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 176074 3 + 85365473 -GGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021814 3 + 185818997 -GAG i rheMac8.chr3 I 22 C 0 s macFas5.chr3 33637764 3 + 192294377 -GAG i macFas5.chr3 I 22 C 0 s macNem1.NW_012019910v1 4404984 3 - 9440265 -GAG i macNem1.NW_012019910v1 I 22 C 0 s cerAty1.NW_012002954v1 16992768 3 - 21915920 -GAG i cerAty1.NW_012002954v1 I 22 C 0 s manLeu1.NW_012101810v1 161693 3 - 2515279 -GAG i manLeu1.NW_012101810v1 I 22 C 0 s calJac3.chrUn_GL286444 47880 3 + 138751 -AGG i calJac3.chrUn_GL286444 I 22 C 0 s saiBol1.JH378296 363250 3 - 2409723 -AGG i saiBol1.JH378296 I 22 C 0 s cebCap1.NW_016107703v1 526781 3 - 2125214 -AGG i cebCap1.NW_016107703v1 I 22 C 0 s otoGar3.GL873611 2259425 3 - 8137123 -GGG i otoGar3.GL873611 I 22 C 0 s canFam3.chr6 61046719 3 - 77573801 CGG- i canFam3.chr6 C 0 I 300 e colAng1.NW_012117710v1 319975 51 + 6586416 I e chlSab2.chr28 128493 33 - 21531802 I e aotNan1.NW_018514293v1 114485 34 + 376347 I a score=37673.000000 s hg38.chr7_KI270899v1_alt 154173 12 + 190869 AACCAAACA-TTT s panTro5.chr7_NW_015973580v1_random 29154 12 - 83720 AACCAAACA-TTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544246 12 + 162613886 AACCAAACA-TTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115743 12 - 432965 AACGAAACA-TTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 176077 12 + 85365473 AACGGAACA-TTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021817 11 + 185818997 AACGGAACA-TG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637767 11 + 192294377 AACGGAACA-TG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404987 11 - 9440265 AACGGAACA-TG- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992771 11 - 21915920 AACGGAACA-TG- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 161696 11 - 2515279 AACGGAACA-TG- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 47883 12 + 138751 AACTGAACA-TTT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 363253 12 - 2409723 AACCGAACA-TTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526784 13 - 2125214 AACTGAACATTTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2259428 12 - 8137123 AGCTCAATG-TTT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 319975 51 + 6586416 I e canFam3.chr6 61046722 300 - 77573801 I e chlSab2.chr28 128493 33 - 21531802 I e aotNan1.NW_018514293v1 114485 34 + 376347 I a score=440496.000000 s hg38.chr7_KI270899v1_alt 154185 52 + 190869 -ACATGAAGGAAGGTTTAGAGGTGAACGTCCA---CTGCGGAGGTCGGAGAAG----CAC s panTro5.chr7_NW_015973580v1_random 29166 52 - 83720 -ACATGAAGGAAGGTCTAGAGGTGAACGCCCA---CTGCGGAGGTCGGAGAAG----CAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544258 52 + 162613886 -ACATGAAGGAAGGTCTAGAGGTGAGCGTCCA---CTGCGGAGGTCGGAGAAG----CAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115755 55 - 432965 -ACATGAAGGAAGGTCTAGAGGTGAACGTCCACTGCTGCGGAGGTCGGAGAAG----CAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 176089 52 + 85365473 -ACACGAAGGAAGGTCCAGAGGTGAACGTCCA---CTGCGGAGGCCGGAGAAG----CAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021828 52 + 185818997 -ACATGAAGGAAGGTCCAGAGATGAACGTCCC---CTGTGGAGGCTGGAGAAG----CAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637778 52 + 192294377 -ACATGAAGGAAGGTCCAGAGATGAACGTCCC---CTGTGGAGGCTGGAGAAG----CAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4404998 52 - 9440265 -ACATGAAGGAAGGTCCAGAGGTGAACGTCCC---CTGTGGAGGCTGGAGAAG----CAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992782 52 - 21915920 -ACATGAAGGAAGGTCCAGAGGTGAACGTCCC---CTGTGGAGGCCGGAGAAG----CAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 128526 52 - 21531802 -ACGTGAAGGAAGGTCCAGAGGTGAACGTCCC---CTGTGGAGGCCGGAGAAG----CAC i chlSab2.chr28 I 33 C 0 s manLeu1.NW_012101810v1 161707 52 - 2515279 -ACATGAAGGAAGGTCCAGAGGTGAACGTCCC---CTGTGGAGGCCGGAGAAG----CAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 320026 52 + 6586416 -ACATGAAGGAAGGTCCAGAGGTGAACGTCCC---CTGCGGAGGTCGGAGAAG----CAC i colAng1.NW_012117710v1 I 51 I 510 s calJac3.chrUn_GL286444 47895 56 + 138751 -ACACGAAGGAAGGTCTGAGGGTGAACATCCA---GTGTGGAGGTCAGAGGAGCACTCAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 363265 52 - 2409723 -ACACGAAGGAAGGTCTGAAGGTGGACGTCCG---ATGGGGAGGTCGGAGGAG----CAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526797 52 - 2125214 -ACATGAAGAAAGATCTGAAAGTGAACATCCA---ATGTGGAGGTCGGAGAAG----CAC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2259440 52 - 8137123 ACCTTGGAGGAAGGTCAGAAGGCAAAAGTGCA---CC-TGGGTGTTGAAGGAG----AAC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61046722 300 - 77573801 I e aotNan1.NW_018514293v1 114485 34 + 376347 I a score=778753.000000 s hg38.chr7_KI270899v1_alt 154237 124 + 190869 TCAGGTCAGCGGGCAGAGCGGCTAGTCGGTGGGCCGAGCTCTCTGCTACCCCCGCAGGAGTGTCCCGACGCCATCCCAG-AAGCAGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGACTGA s panTro5.chr7_NW_015973580v1_random 29218 123 - 83720 TCAGGTCAGCGGGCAGAGTGGCTAGTCGGTGGGCCGAGCTCTCTGCTACCCC-GCAGGAGTGTCCCGACGCCATCCCAA-AAGCAGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGACTGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544310 123 + 162613886 TCAGGTCAGCGGGCAGAGCGGCTAGTCGGTGGGCCGAGCTCTCTGCTACCCC-GCAGGAGTGTCCCGACGCCATCCCAA-AAGCAGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGACTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115810 124 - 432965 TCAGGTCAGCGGGCAGAGCGGCTAGTCGGTGGGCCGAGCTCTCTGCTACCCCCGCAGGAGTGTCCCGACGCCATCCCAA-AAGCAGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGACTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 176141 124 + 85365473 TCAGGTGGGCGGGCGGAGCGGCTCGTCGGTGGGCCGAGCTCTCTGCTACCCCTGCAGGAGTGTCCCGACGCCATCCCAA-AAGCAGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGACCGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34021880 124 + 185818997 TCAGGTGGGCGTGCGGAGCTGTGTGGCGGC-GGCCGAGCTCTCCGCTACCCCTGCAGGAGGGTCCCGACGCCATCCCAAGAAGCAGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGCCTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637830 124 + 192294377 TCAGGTGGGCGTGCGGAGCTGTGTGGCGGC-GGCCGAGCTCTCCGCTACCCCTGCAGGAGGGTCCCGACGCCATCCCAAGAAGCAGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGCCTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4405050 124 - 9440265 TCAGGTGGGCGTGCGGAGCTGTGTGGCGGC-GGCCGAGCTCTCCGCTACCCCTGCAGGAGGGTCCCGACGCCATCCCAAGAAGCAGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGCCTGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992834 124 - 21915920 TCAGGTGGGCGTGCGGAGCTGTGTGGCGGC-GGCCGAGCTCTCCGCTACCCCTGCAGGAGGGTCCCGACGCCATCCCAAGAAGCGGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGCCTGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 128578 124 - 21531802 TCAGGTGGGCGTGCGGAGCTGTGCGGCGGT-GGCCGAGCTCTCCACTACCCCTGCAGGACGGTCCCGATGCCATTCCAAGAAGCGGCACCT----GTGGGCCACGGCGCTTGCTTAGAGCCTGGCCTGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 161759 124 - 2515279 TCAGGTGGGCGTGCAGAGCTGTGTGGCGGC-GGCCGAGCTCTCCGCTACCCCTGCAGGAGGGTCCCGACGCCATCCCAAGAAGCGGCACCT----GTGGGCCACGGCGTTTGCTTAGAGCCTGGCCTGA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 47951 127 + 138751 TCAGGT-GGCGTGTGGAGCTGC-TGTTGGTGGGCCGAGCCATCTATTACCCCTGCAGCAGAGTCCCAACGCCACCCCAAGAGGCGGCCCCTTGGGGTGGGCCACGCTGTTTGCCTGGAGCCTAGACTGA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 363317 122 - 2409723 TCAGGT-GGCGTGCGGACCTGC-TGTCGGTGGGTCGAGCTGTCTACTACCCCTGCAGCAGAGTCCCAGCACCGCCCCAAGAGGCGGCCCCT----GT-GGCCACGCCGATTGCCTGGGGCCTGGACTGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526849 123 - 2125214 TCAGGT-GGCGTGCAGAGCTGC-TGTCGGTGGACCAAGCCGTCTACTACCCCTGCAGCAGAGTCCCAACGCCACCCCAAGAGGCAACCCCT----GTGGGCTACGCTGTTTGCCTGGAGCCTGGACTGA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2259492 101 - 8137123 CTCGGTGAGAGCA-GGAGTTGCTCCCTGGAGGACGGGAACCTCT-----CTCCGCAGCAGCGTCTAGACCGCACTTTGGTCAGCAGTGGCT----GT------------------AGGGCTGGGACTGA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 320078 510 + 6586416 I e canFam3.chr6 61046722 300 - 77573801 I e aotNan1.NW_018514293v1 114485 34 + 376347 I a score=221261.000000 s hg38.chr7_KI270899v1_alt 154361 24 + 190869 GGCTGCCTGGACGGGGCCCCTCAC s panTro5.chr7_NW_015973580v1_random 29341 24 - 83720 GGCTGCCTGGACGGGGCCCCTCAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544433 24 + 162613886 GGCTGCCTGGACGGGGCCCCTCAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115934 24 - 432965 GGCTGCCTGGACGGGGCCCCTCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 176265 23 + 85365473 GGCTG-CTGGACAGGGCCCCTCGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34022004 24 + 185818997 GGCTGTCCGGACAGGGCCCCTCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637954 24 + 192294377 GGCTGTCCGGACAGGGCCCCTCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4405174 24 - 9440265 GGCTGCCCGGACAGGGCCCCTCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992958 24 - 21915920 GGCTGCCCGGACAGGGCCCCTCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 128702 24 - 21531802 GGCTGCCCAGACAGGGCCCCTCAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 161883 24 - 2515279 GGCTGCCCGGACAGGGCCCCTCAC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 48078 24 + 138751 GGCTGCCTGGAGAGGGCTCCTCAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 363439 24 - 2409723 GGCTGCCTGGATAGGGCTCCTCAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526972 24 - 2125214 GGCTGCCTGGATAGGGCTCCTCAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 114519 24 + 376347 GGCTGCCTGGATAGGGCTCCTCAC i aotNan1.NW_018514293v1 I 34 C 0 s otoGar3.GL873611 2259593 24 - 8137123 TGCCACCTGGACAAAGCCCCTGAG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 320078 510 + 6586416 I e canFam3.chr6 61046722 300 - 77573801 I a score=1961900.000000 s hg38.chr7_KI270899v1_alt 154385 271 + 190869 C------CGGCCAGAGTTAGGGGTGC-CGCTGCCA-CCCCCAT--------GGACCCGCTTCGGGCTG---CTCAGT-CCTTGTTCATTTGCATCCATCTTGGTTTTTAGGAAGGCAAGTTTCTCAGGAGCTCAGAAAATTAATTTCGTAGTGATTAGGCTATCCCCAGAGTAACA--CGTTCCAACTGTCACCAGCACGGACTTC---TCATGAAGCCTGGGACCATTTGCAAGGACTCCC--------GGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt----TTTCCTGTGT s panTro5.chr7_NW_015973580v1_random 29365 275 - 83720 C------CGGCCAGAGTTAGGGGTGC-TGCTGCCA-CCCCCAT--------GGACCTGCTCCGGACTG---CTCAGT-CCTTGTTCATTTGCATCCATCTCGGTTTTTAGGAAGGCAAGTTTCTCAGGAGCTCAGAAAATTAATTTCGTAGTGATTAGGCTATCCCCAGAGTAACA--CGTTCCAACTGTCACCAGCACGGACTTC---TCATGAAGCCTGGGACCATTTGCAAGGACTCCC--------GGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTTCCTGTGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544457 257 + 162613886 C------CGGCCAGAGTTAGGGGTGC-TGCTGCCA-CCCCCAT--------GGACCTGCTCCGGACTG---CTCAGT-CCTTGTTCATTTGCATCCATCTCGGTTTTTAGGAAGGCAAGTTTCTCAGGAGCTCAGAAAATTAATTTCGTAGTGATTAGGCTATCCCCAGAGTAACA--CGTTCCAACTGTCACCAGCACGGACTTC---TCATGAAGCCTGGGACCATTTGCAAGGACTCCC--------GGgtgtgtgtgtgtgtgtgtgtgtgtgtgt------------------TTTCCTGTGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 115958 259 - 432965 C------CGGCCAGAGTTAGGGGTGC-CGCTGCCA-CCCCCAT--------GGACCTGCTCCGGGCTG---CTCAGT-CCTTGTTCATTTGCATCCATCTCGGTTTTTAGGGAGGCAAGTTTCTCAGGAGCTCAGAAAATTAATTTCGTAGTGATTAGGCTATCCCCAGAGTAACA--CGTTCCAACTGTCACCAGCACGGACTTC---TCATGAAGCCTGGGACCGTTTGGAAGGACTCCC--------GGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt----------------TTTCCTCTGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 176288 270 + 85365473 C------CGGCCAGAGCTAGGGGTGC-CGCTGCCA--CCCCAC--------GGACCCGGTCCGGGCTG---CCCAGC-CCTTGTTCATTTGCATCCATCTTGGTTTTTAGGAAGGCAAGTTTCTCAGGAGCTCAGACAATTAATTTCGTAGTGACTGGGCTATCCCCAGAGTAACA--CGTTCCAACTGTCACCAGCACGGACTTC---TCATGAAGCCTGGGACCGTTTGCAAGGACTCCC--------AGGGGTGTGtgtgtgtgttcctgtgtgtgttcctgtctgcgtgt----gttcctgtgt i nomLeu3.chr20 C 0 I 5618 s rheMac8.chr3 34022028 258 + 185818997 C------CGGCCCGAGTTAGGGGTGC-CGCCGCCACCCCCCGT--------GGACCTGCTGCGGGCTG---CTGAGC-CCTTGTTCATTTGCATCCATCTCGGTTGTTAGGAAGGCAGGTTTCTCAGAAGCTCAGAAAATTAACTTCATAGTGATCGGGCCATCCCCGGAGTAACA--CGTTCCAACGGTCAACAGCGTGGACTTC---TCATGAAGCCTGGGACCTTTTGCGAGGAATCCC--------gtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtCT------------------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33637978 258 + 192294377 C------CGGCCCGAGTTAGGGGTGC-CGCCGCCACCCCCCGT--------GGACCTGCTGCGGGCTG---CTGAGC-CCTTGTTCGTTTGCATCCATCTCGGTTGTTAGGAAGGCAGGTTTCTCAGAAGCTCAGAAAATTAACTTCATAGTGATCGGGCCATCCCCGGAGTAACA--CGTTCCAACGGTCACCAGCGTGGACTTC---TCATGAAGCCTGGGACCTTTTGCGAGGAATCCC--------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt------------------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4405198 240 - 9440265 C------CAGCCCGAGTTAGGGGTGC-CGCCGCCACCCCCCGT--------GGACCTGCTGCGGGCTG---CTGAGC-CCTTGTTCGTTTGCATCCATCTCGGTTGTTAGGAAGGCAGGTTTCTCAGAAGCTCAGAAAATTAACTTCATAGTGATCGGGCCATCCCCAGAGTAACA--CGTTCCAACGGTCACCAGCGTGGACTTC---TCATGAAGCCTGGGACCTTTTGCGAGGAATCCC--------------------------gtgtgtgtgtgtgtgtgtgtgt------------------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16992982 258 - 21915920 C------CGGCCCAAGTTAGGGGTGC-CGCCGCCACCCCCCGT--------GGACCTGCTGCGGGCTG---CTGAGC-CCTTGTTTGTTTGCATCCATCTCGGTTGTTAGAAAGGCAGGTTTCTCAGAAGCTCAGAAAATTAACTTCATAGTGATCAGGCCATCCCCAGAGTAACA--CATTCCAACGGTCACCAGCGTGGACTTC---TCATGAAGCCTGGGACCTTTTGCGAGGAATCCC--------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt------------------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 128726 246 - 21531802 C------CGGCCCGAGTTAGGGGTGC-CGCCGCCACCCCCCGT--------GGACCTTCTCCGGGCTG---CTGAGC-CCTTGTTCGTTTGCATCCATCTCGGTTGTTAGGAAGGCAGGTTTCTCAGAAGCTCAGAAAATTAACTTCATAGTGATCAGGCCATCCCCAGAGTAACA--CGTTCCAACGGTCACCAGCGTGGACTTC---TCATGAAGCCTGGGACCATTTGCGAGGACTCCC--------------------gtgtgtgtgtgtgtgtgtgtgtgtgtgt------------------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 161907 266 - 2515279 C------CGGCCCAAGTTAGGGGTGC-CACCGCCACCCCCCGT--------GGACCTGCTGCGGGCTG---CTGAGC-CCTTGTTTGTTTGCATCCATCTCGGTTGTTAGGAAGGCAGGTTTCTCAGAAGCTCAGAAAATTAACTTCATAGTGATCGGGCCATCCCCAGAGTAACA--CGTTCCAACGGTCACCAGCGTGGACTTC---TCATGAAGCCTGGGACCTTTTGCGAGGAATCCCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt------------------ i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 48102 254 + 138751 C------CGGCCAGAGTTTGGAGTGC-AGCTGCCA-CCCTCAT--------GGGCCCACTCCAGGCCA---CTCAGCACCTTGTTCATCTGCATCCATCATGGTTTTTAGGAAGGCAAGTTTCTCAGGAGCTCAGAAAATTAATTTCATAGCGATTGGGCTATCCCCAAAGTACCA--TGTTCCAACTGTCACCATCATGGCCTT----TCATGAAGCCTGGGTCCATTTGCAAGGACTCCC--------AGgtgtgtgtgtgtgtgtgtgtgtgtgt---------------------TTCCTGTGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 363463 267 - 2409723 C------CGGCCAGAGTTAGGAGTGC-AGCTGCCA-CCCACGT--------GGGCCCACTCCAGGCCA---CTTAGCACCTTGTTCTTCTGCATCCATCATGGTTTTTAGGAAGGCAAGTTTCTCAGGAGCTCAGAAGATTAATTTCATAGCGATTGGGCTATCCCCAAAGTAACA--TGTTCCAACTGTCACCATCATGGCCTT----TCATGAAGCCTGGGGCCATTTGCAAGGACTCCC--------AGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt--------gtttctgtgt i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 526996 249 - 2125214 C------TGGCCAGAGTTAGGAGTGC-AGTTGCCA-CCCACAT--------GGGCCCATTCCAGGCCG---CTCAGCACCTTGTTCATCTGCATCCATCATGGTTTTTAGGAAGGCAAGTTTCTCGGGAGCTCAGAAAATTAATTTCATAGCGATTGGGCTATCCCCAAAGTAACA--TGTTCCAACTGTCACCATCATGGCCTT----TCATGAAGCCTGGGGCCATTTGCAAGGACTCCC--------AGgtgtgtgtgtgtatgtgtgt-----T---------------------TTCCTCTGT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 114543 261 + 376347 C------CGGCCAGAGTTAGGAGTGC-AGCTGCCA-CCTC--T--------GGGCCCACTCCAGGCCG---CTCAGCACCTTGTTCATCTGCATCCATCATGGTTTTTAGGAAGGCAAGTTTCTCAGGAGCTCAGAAAATTAATTTCATAGCCATTGGGCTATCCCCAAAGTAACA--TGTCCCAACTGTCACCATCGAGGCCTT----TCATGAAGCCTGGGGCCATTTGCAAGGACTCCC--------AGGGgtgtgtgtgtgtgtgtgtgtgtgt----gtgtgtgt--------TTTCCTGTGT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2259617 245 - 8137123 TTAGGAGTGGCCAGAGTTAGGAGTGAGGGCTGCTA--TCTCAG--------GGGCCAACTCTGGGCCA---C------CCCAGCACTTTGGCCTCCATCTCGTTTT---GGAAGGCAAGTTTCTTGGGAGCTTGGAAAATGAATGTTTTTGTCATTGGCCCATCCACAGAGCAACGCTCATTCAAACTGTCACCGGCCCGGACTTC---TCATGATGTCT--GTTTATGTCCGAGAACCCCT--------AAGGGTCTACTTCATTTCTTTCTTGTATGT---------------------------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61047022 221 - 77573801 C------CGACAGGAGCGAGA------AGACACCA-CCTCCGTCGGCAGCAGCACCTGCTGGGGCCCATCCCCGAGAACCGGGTCCACCAGCACGCACCTCAACTCTCTGGCAGGCAGATTCCC--GGGGCTCAGGAGCTGAATTT----GTCACTGG------CCCAATGT-TCT--CCTTCGTGGTGCCACCCACACGGGCATCTCTTCATGGGGCCTGAG-CCCTTTGCAAGGACTGTG--------TCCTGTGT-------------------------------------------------- i canFam3.chr6 I 300 C 0 e colAng1.NW_012117710v1 320078 510 + 6586416 I a score=826049.000000 s hg38.chr7_KI270899v1_alt 154656 106 + 190869 CCTCTGAGTAGACA-CCGCTATGAATGTAGACTT-GAGGTTTCTTGGCAAACATGTGTCCTCACTT-ATGTGGCTGAGGAT-TCTTCCCCGACTCAGGATGCAAGTGCCA s panTro5.chr7_NW_015973580v1_random 29640 106 - 83720 CCTCTGAGTAGACA-CCGCTATGAATGGAGACAT-GAGGTTTCTTGGCAAACATATGTCCTCACTT-ATGTGGCTGAGGAT-TCTTCCCCAACTCAAGATGCAAGTGCCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544714 105 + 162613886 CCTCTGAGTAGACA-CCGCTATGAATGGAGACAT-GAGGTTTCTTGGCAAACATATGTCCTCACTT-ATGTGGCTGAGGAT-TCTTCCCCAACTCATT-TGCAAGTGCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 116217 106 - 432965 CCTCTGAGTAGACA-CCGCTATGAATGGAGACTT-GGGGTTTCTTGGCAAACATGCGTCCTCACTT-ACGTGGCTGAGGAT-TCTTCCCTGACTCAAGATGCAGGTGCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182176 104 + 85365473 CCTCTGAGTAGACA-CGGCTGTGAATGGAGACTT-GGGGTTTCTTGGCAAACGTGTGTCCTCACTT-ATGTGGCTGAGGAT-TCTTCCTGGACTCAAGATGCCAGTGC-- i nomLeu3.chr20 I 5618 C 0 s rheMac8.chr3 34022286 105 + 185818997 CTTCTGAGTAGACA-CCACTGTGAATGGAGACTTGGGGGTTTCTTGGCGAACGTGTGTCCTCCCTG-ATGTGGCCGAGGAT-TCTTTCTGGACTCAAA-TGCCAGTGCC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33638236 105 + 192294377 CTTCTGAGTAGACA-CCACTGTGAATGGAGACTTGGGGGTTTCTTGGCGAACGTGTGTCCTCCCTG-ATGTGGCCGAGGAT-TCTTTCTGGACTCAAA-TGCCAGTGCC- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4405438 105 - 9440265 CTTCTGAGTAGACA-CCACTGTGAATGGAGACTTGGGGGTTTCTTGGCGAACGTGTGTCCTCCCTG-ATGTGGCCGAGGAT-TCTTTCTGGACTCAAA-TGCCAGTGCC- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16993240 105 - 21915920 CCTCTGAGTAGACA-CCACTGTGAATGGAGACTTGGGGGTTTCTTGGCGAACGTGTGTCCTCCCTG-ATGTGGCCGAGGAT-TCTTTCTGGACTCAAA-TGCCAGTGCC- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 128972 105 - 21531802 CCTCTGAGTAGACA-CCACTGTGAATGGAGACTTGGGGGTTTCTTGGCGAACGTGTGTCCTCCCTG-ATGTGGCCGAGGAT-TCTTTCTGGGCTCAAA-TGCCAGTGCC- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 162173 105 - 2515279 CCTCTGAGTAGACA-CCACTGTGAATGGAGACTTCGGGGTTTCTTGGCGAACGTGTGTCCTCCCTG-ATGTGGCCGAGGAT-TCTTTCTGGACTCAAA-TGCCAGTGCT- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 48356 106 + 138751 CCTCTGAGTAAACA-CCGCTGTGAACAGAGACCTGGGGGTTTCTCGGCAAATGTGTGTCCTCACTT-ATGTGGTTGATGAT-TCTTCTTTAACTCAAGATGCAAGTACC- i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 363730 106 - 2409723 CCTCTGAGTAAACA-CTGCTGTGAACAGAGACCTGGGGGTTTCTCAGTAAACATGTGTCCTCACTT-ACGTGGTCGATGAT-TCTTCTTTAACTCAAAATGCAAGTACC- i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 527245 107 - 2125214 CCTCTGAGTAAACA-CTGCTGTGAACAGAGACCTGGGGGTTTCTCGGCAAATGTGTGTCCTCACTTAACGTGGTTGATGAT-TCTTCTTTAACTCAAGATGCAAGTACC- i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 114804 106 + 376347 CCTCTGAGTAAACA-CTGCGGTGAACAGAGACCTGGGGGCTTCTCGGCAAACGTGTGTCCTCACTT-ACGTGGCTGATGAT-TCTTCTTTAACTCAAGATGCAAGTACC- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2259862 106 - 8137123 CCACTGAGTAGATA-CTGCTGTAAATGGAGACTTGGGAGTTTCTTGACAAACGTGT-CCCACAGGT-ACATGGTCGACAGTGTCTTCCTTGACTCAAGGTGCAAGTCCC- i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61047243 92 - 77573801 GCTCTGAACAGACAGCTGTTGTCAATGGGGACTG-GAATTAACTCGGGGGACATGAGCCCCTCATT-TTACA----------TTGCCTTCAACTCATG-----GGATCC- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 320078 510 + 6586416 I a score=718706.000000 s hg38.chr7_KI270899v1_alt 154762 75 + 190869 GGGGACCCGAGTCTCCGGGG-AAAGCT-GGGTGCATGCACGGTTCTTTGATCCGTCATTTGAATAATTAGCTCTTAA s panTro5.chr7_NW_015973580v1_random 29746 75 - 83720 GGGGACCCGAGTCTCCGGGG-AAAGCT-GGGTGCATGCACGGTTCTTTGATCCGTCATTTGAATAATTAGTTCTTAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544819 75 + 162613886 GGGGACCCGAGTCTCCGGGG-AAAGCT-GGGTGCATGCACGGTTCTTTGATCCGTCATTTGAATAATTAGTTCTTAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 116323 75 - 432965 GGGGACCCGAGTCTCCGGGG-AAAGCT-GGGTGCATGCACGGTTCTTTGATCCGTCATTTGAATAATTAGTTCTTAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182280 75 + 85365473 AGGGACCCGAGTCTCCGGGG-AAAGCT-GGGTGCATGCACGGTTCTTGGATCAGTCGGTTGAATAATTAGTTCTTAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34022391 73 + 185818997 GGGGACCCGAGTCTCCGGGG-AAAGCT-GGGTGCATGCGCAGTTCTTTGATCAGTTGG--GAATAACTAGTTCTTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33638341 73 + 192294377 GGGGACCCGAGTCTCCGGGG-AAAGCT-GGGTGCATGCGCAGTTCTTTGATCAGTTGG--GAATAACTAGTTCTTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4405543 73 - 9440265 GGGGACCCGAGTCTCCGGGG-AAAGCT-GGGTGCATGCGCAGTTCTTTGATCAGTTGG--GAATAACTAGTTCTTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16993345 73 - 21915920 AGGGACCCGAGTCTCCAGGG-AAAGCT-GGGTGCATGCGCAGTTCTTTGATCAGTTGG--GAATAACTAGTTCTTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 129077 75 - 21531802 GGGGACCCGAGTCTCCGGGG-AGAGCT-GGGTGCATGCACAGTTCTTTGATCAGTCGGTTGAATAACTAGTTCTTAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 162278 73 - 2515279 GGGGACCCGAGTCTCCGGGG-AAAGCT-GGGTGCATGCGCAGTTCTTTGATCAGTTGG--GAATAACTAGTTCTTAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 320588 75 + 6586416 GGGGACCCGAGTCTCCGGGG-AGAGCT-GGGTGCAGGCACGGTTCTTTGATCAGTCGGTTGAATAACTAGTTCTTAA i colAng1.NW_012117710v1 I 510 C 0 s calJac3.chrUn_GL286444 48463 75 + 138751 GGGGGCCCAGGTCTCCAGGG-AAAGCC-GGGCATGTGCACTGGTCTGTGATGAGTCAGTTGAACAATTAGTTCTTAA i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 363837 75 - 2409723 GGGGGCCCAGGTCTCCAGGG-AAAGCT-GGGTGCATGCACACGTCTGTGATGAGTCAGTTGAACAATTAGTTGTTAA i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 527353 75 - 2125214 GGGGGCACGGGTCTCCAGAA-AAAGCT-GGGTGCATGCACGGGTCTGTGATGAGTCAGTTGAACAATTAGTTCTTAA i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 114910 75 + 376347 GGGGGCCCGGGTCTCCAGGG-AAAGCT-GGGCACATGCACGGGTCTGTGATGAGTCAGTTGAACAATTAGTTCTTAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2259969 73 - 8137123 GGGGACCTGGGTCTCCAGAGTAAAGCCAGGGGGAACATATGGTTCTGTGGTCAGTT----GAGTAATTAGTTGTCAG i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61047335 72 - 77573801 TTAGAGTCGTGACTCCAAGGCAAAGCT-GGGGGAACTACCAGTTCT----TCAGCAAACTGAGCAATCAGCTCTCAG i canFam3.chr6 C 0 I 106 a score=273229.000000 s hg38.chr7_KI270899v1_alt 154837 32 + 190869 TTAGCTGTCTGAGTATGATCATC-AGCTTG-AAT- s panTro5.chr7_NW_015973580v1_random 29821 32 - 83720 TTAGCTGTCTGAGTATAATCATC-AGCTTG-AAT- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544894 32 + 162613886 TTAGCTGTCTGAGTATAATCATC-AGCTTG-AAT- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 116398 32 - 432965 TTAGCTGTCTGAGTATAATCATC-AGCTTG-AAT- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182355 33 + 85365473 TTAGCCGTCTGAATATAATCATC-AGCTTGAAAT- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34022464 32 + 185818997 TTAGCCGTCTGAATATAATCGTC-AGCTCG-AAT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33638414 32 + 192294377 TTAGCCGTCTGAATATAATCGTC-AGCTCG-AAT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4405616 32 - 9440265 TTAGCCGTCTGAATATAATCGTC-AGCTCG-AAT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16993418 32 - 21915920 TTAGCCGTCTGAATATAATCATC-AGCTCG-AAT- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 129152 32 - 21531802 TTAGCCGTCTGAATATAATCGTC-AGCTCG-AAT- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 162351 32 - 2515279 TTAGCCATCTGAATATAATCGTC-GGCTCG-AAT- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 320663 32 + 6586416 TTATCTGTCTGAATATAATCGTC-AGCTTG-AAT- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 48538 33 + 138751 GTAGCCACCTGAGTATAATCATTAAGCTTG-AAT- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 363912 33 - 2409723 GTAGCCATCTGAGTATAATCATTAAGCTCG-AAT- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 527428 33 - 2125214 GTAGCCATCTGAGTATAATCATTAAGCTTG-AAT- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 114985 33 + 376347 GTAGCCATCTGAGTATAATCATTAAGCTGG-AAT- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2260042 33 - 8137123 TTAGTCATCAGAGTTAAATGGTA-CTTCTG-AATA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61047407 106 - 77573801 I a score=3169428.000000 s hg38.chr7_KI270899v1_alt 154869 313 + 190869 GTAAGTTTCTTTAGAGGACACTG----------TGCTTTCCCATCCTGGTAAGTGGCGATGATGGGTTTCTGGGTATGAGGTTAATTTGAGGAGGAATTCTCACCTCCTAGAGCCTG-------GCAGACAGCAGTCATGTGGCGCGTTAGCCAATTACCGGGAAAGCTTC-CTGTG-CCCGGACGGAATCTGCTTCC---AGGAGCTGGGGGAGAGG-AGGCTGCACAT--TGCTCCTGGTC--ACTGCCGGCGCCTTCTGTA---TCCTCT---------------------------GACCCACCCTCCTACGGGAGGGAACGTCTCCGCTGGGGAAGACGACCGTGTGGGCTCATCTCCAGCCACT s panTro5.chr7_NW_015973580v1_random 29853 313 - 83720 ATAAGTTTCTTTAGAGGACACTG----------TGCTTTCCCATCCTGGTAAGTGGCGATGATGGGTTTCTGGGTGTGAGGTTAATTTGAGGAGGAATTCTCACCTCCTAGAGCCTG-------GCGGACAGCAGTCATGTGGCGCGTTAGCCAATTACCGGGAAAGCTTC-CTGTG-CACGGACGGAATCTGCTTCC---AGGAGCTGGGGGAGAGG-AGGCTGGACAT--TGCTCCTGGTC--ACTGCCGGCGCCTTCTGTA---TCCTCT---------------------------GACCCACCCTCCTACGGGAGGGAACGTCTCCGCTGGGGAAGACGACCGTGTGGGCTCATCTCCAGCCACT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 544926 313 + 162613886 ATAAGTTTCTTTAGAGGACACTG----------TGCTTTCCCATCCTGGTAAGTGGCGATGATGGGTTTCTGGGTGTGAGGTTAATTTGAGGAGGAATTCTCACCTCCTAGAGCCTG-------GCGGACAGCAGTCATGTGGCGCGTTAGCCAATTACCGGGAAAGCTTC-CTGTG-CACGGACGGAATCTGCTTCC---AGGAGCTGGGGGAGAGG-AGGCTGGACAT--TGCTCCTGGTC--ACTGCCGGCGCCTTCTGTA---TCCTCT---------------------------GACCCACCCTCCTACGGGAGGGAACGTCTCCGCTGGGGAAGACGACCGTGTGGGCTCATCTCCAGCCACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 116430 312 - 432965 ATAAGTTTCTTTAGAGGACACTG----------TGCTTTCCCATCCTGGTAAGTGGCGATGATGGGTTTCTGGGTGTGAGGTTAATTTGAGGAGGAATTCTCACCTCCTAGAGCCTG-------GCAGACAGCAGTCATGTGGCGCGTTAGCCAATTACCGGGAAAGCTTC-CTGTG-CCCGGACGGAATCTGCTTCC---AGGAGCTGGGGGAGAGG-AGGCTGGACAT--TGCTCCTGGTC--ACTGCCGG-GCCTTCTGTA---TCCTCT---------------------------GACCCACCCTCCTACGGGAGGGAACGTCTCCGCTGGGGAAGACGACCGTGTGGGCTCATCTCCAGCCACT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182388 313 + 85365473 ATAAGTTTCTTTAGAGGAAACTG----------CGCTTCCCCATCCTGGTAAGTGGCGATGATGGGTTTCTGGGTGTGAGGTTAATTTGTGGAGGAATTCTCACCTCCTAGAGCCTG-------GCAGACGGCAGTCATGTGGCACGTTAGCCAATTACCGGGAAAGCTTC-CTGTG-CCCGGACGGAATCTGCTTCC---AGGAGCTGGGGGAGACG-AGGCTGGACAT--CGCTTCTGGTC--GCTGCCGGCGCCTTCTGTA---TCCTCT---------------------------GACCCACCCTCCTGCGGGAGGGAACGTCCCCGCTGGGGAAGACGACTGTGTGGGCTCATCTCCAGCCACC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34022496 313 + 185818997 GTAGGTTTCTTTGGAGGAAACTG----------TGCTTCCCCATCCTGGTAAGCGGCGATGATGAGTTTCTGGGCGTGAGGTTAATTTGTGGAGGAATTCTCACCTCCTAGAGGCTG-------GCAGACGGCAGTCATGTGGCACGTTGGCCAATTACCAGAAAAGCTTC-CTGTG-CCCAGACGGAATCTGCTTCC---AGGAGCTGCGGGAGAGG-AGGCTGGACAT--GGCTTCTGGTC--ACTGCCAGCACCTTCTGTG---TCTTAT---------------------------GACCCACCCTCCTACGGGAGGGAAGGTCCCCGCTGGGGAAGACGACCGTGTGGGCCCATCTCCAGCCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33638446 313 + 192294377 GTAGGTTTCTTTGGAGGAAACTG----------TGCTTCCCCATCCTGGTAAGCGGCGATGATGAGTTTCTGGGCGTGAGGTTAATTTGTGGAGGAATTCTCACCTCCTAGAGGCTG-------GCAGACGGCAGTCATGTGGCACGTTGGCCAATTACCAGAAAAGCTTC-CTGTG-CCCAGACGGAATCTGCTTCC---AGGAGCTGCGGGAGAGG-AGGCTGGACAT--GGCTTCTGGTC--ACTGCCAGCACCTTCTGTG---TCTTAT---------------------------GACCCACCCTCCTACGGGAGGGAAGGTCCCCGCTGGGGAAGACGACCGTGTGGGCCCATCTCCAGCCACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4405648 313 - 9440265 GTAGGTTTCTTTGGAGGAAACTG----------TGCTTCCCCATCCTGGTAAGCGGCGATGATGGGTTTCTGGGCGTGAGGTTAATTTGTGGAGGAATTCTCACCTCCTAGAGGCTG-------GCAGACGGCAGTCATGTGGCACGTTGGCCAATTACCAGAAAAGCTTC-CTGTG-CCCAGACGGAATCTGCTTCC---AGGAGCTGCGGGAGAGG-AGGCTGGACAT--GGCTTCTGGTC--ACTGCCAGCACCTTCTGTG---TCTTAT---------------------------GACCCACCCTCCTACGGGAGGGAAGGTCCCCGCTGGGGAAGACGACCGTGTGGGCCCATCTCCAGCCACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16993450 313 - 21915920 GTAGGTTTCTTTGGAGGAAACTA----------TGCTTCCCCATCCTGGTAAGCGGCGATGATGGGTTTCTGGGAGTGAGGTTAATTTGTGGAGGAATTCTCACCTCCTAGAGGCTG-------GCAGACGGCAGTCATGTGGCACGTTGGCCAATTACCAGAAAAGCTTC-CTGTG-CCCAGACAGAATCTGCTTCC---AGGAGCTGCGGGAGAGG-AGGCTGGACAT--GGCTTCTGGTC--ACTGCCAGCACCTTCTGTG---TCCTAT---------------------------GACCCACCCTCCTACGGGAGGGAAGGTCCCCGCTGGGGAAGACGACCGTGTGGGCCCATCTCCAGCCACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 129184 271 - 21531802 GTAGGTTTCTTCGGAGGAAACTG----------TGCTTCCCCATCCCGGTAAGCGGCGATGACGGGTTTCTGGGCGTGAGGTTAATTTGTGGAGGGATTCTCACCTCCTGGAGCCTG-------GCAG------------------------------------------T-CAGTG-CCCAGACGGAATCTGCTTCC---AGGGGCTGGGGGAGAGG-AGGCTGGACGT--GGCTTCTGGTC--ACTGCCGGCGCCTTCTGTG---TCCTCT---------------------------GACCCACCGTCCGACGGGAGGGAAGCTCCCCGCTGGGGAAGACGACCGTGTGGGCCCATCTCCAGCCACT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 162383 313 - 2515279 GTAGGTTTCTTTGGAGGAAACTG----------TGCTTCCCCATCCTGGTAAGCGGCGATGATGGGTTTCTGGGCGTGAGGTTAATTTGTGGAGGAATTCTCACCTCCTAGAGGCTG-------GCAGACGGCAGTCATGTGGCACGTTGGCCAATTACCAGAAAAGCTTC-CTGTG-CCCAGACGGAATCTGCTTCC---AGGAGCTGCGGGAGAGG-AGGCTGGACAT--GGCTTCTGGTG--ACTGCCAGCACTTTCTGTG---TCCTAT---------------------------GACCCACCCTCCTACGGGAGGGAAGGTCCCCGCTGGGGAAGACGACCGTGTGGGCCCATCTCCAGCCACT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 320695 313 + 6586416 GTAGGTTTCTTTGGAGGAAACTG----------TGCTTCCCCATTCTGGTAAGTGGCGATGATAGGTTTCTGGGCGTGAGGTTAATTTGTGGAGGAATTCTCACCTCCTGGAGCCTG-------GCAGACGACAGTCATGTGGCACGTTGGCCAATTACCAGAAAAGCTTC-CTGTG-CCCAGATGGAATCTGCTTCC---AGGAGCTGGGGGAGAGG-AGGCTGGACAT--GGCTTCTGGTC--ACTGCCGGCGCCTTCTGTG---TCCTCT---------------------------GACCCACTGTCCTACGGGAGGGAAGGTCCCCGCTGGGGAAGACGACCGTGTGGGCTCATCTCCAGCCACT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 48571 314 + 138751 GTAGGTTTCTTTCAAGGAATCTG----------TACTTCTCCATCCTGGTCAGTGGCGATGATGGGTTTCTGGGCATGAGATTAATTTGTGGAGGAATTCTTACCTCCTAGAGGCTG-------GCAGGTGGCCATCATGTGGAGCATTAGCCAGTGACCGGACAAGCTCC-CTGTT-CCCTGACGGAATCTGCTTTC---AGGAGCTG-GGGAGAGG-AGGCTAGACAT--TGTTTCTGGCC--ACTGCCAGCATCCTATGTATCCTCCTCT---------------------------GACCCACCCTCCTCCGAGAGGGAACATCCCCACTGGGGAAGACAACC-TGTGGGCTCATCTCCAGCCACT i calJac3.chrUn_GL286444 C 0 M 403 s saiBol1.JH378296 363945 314 - 2409723 GTAGGTTTCTGTAGAGGAACCTG----------TACTTCTCCATCCTGGTCAGTGGCGATGATGGGTTTCTAGGCATGAGATTAATTTGTGGAGGAATTCTCACCTCCTAGAGCCTG-------GCAGATGGCTGTCATGTGGAGCATTAGCCAGTGACCAGACAAGCTCC-CTGTT-CCCTGACGGAATCTGCTTCC---AGGAGCTG-GGGAGAGG-AGGCTGGACAT--TGCTTCTGGCC--ACCGCCAGCACCCTGTGTATCCTCCTCT---------------------------GACCCACCCTCCTCTGAGAGGGAACATCCCCACTGGGGAAGACAGCC-TGTGGGCTCATCTCCAGCCGTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 527461 311 - 2125214 GTAGGTTTCTTTAGAGGAGCCTG----------TACTTCTCCATCCTGGTCAGTGGTGATGATGGGTTTCTGGGCATGAGATTAATTTGTGGAGGAATTCTCACCTCCTAGAGCCTG-------GCAGATGGCCATCATGTGGAGCATTAGCCAGTGACCGGACAAGCTCC-CTGTT-CCCTGACGGAATCTACTTCC---AGGAGCTG-GGGAGAGG-AGGCTGGACAT--TGCTTCTGGCC--ACTGCCAGCACCCTGTGTA---TCCTCT---------------------------GACTCACCCTCCTCCGAGAGGGAACATCCCCACTGGGGAAGACAACC-TGTGGGCTCATCTCCAGGTGCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 115018 314 + 376347 GTAGGTTTCTTTAGAGGAACCTG----------TACGTCTCCATCCTGGTCAGTGGCAATGATGCGTTTCTGGGCATGAGATTAATTTGTGGAGGAATTCTCACCTCCTAGAGCCTG-------GCAGATGGCCGTCATGTGGAGCATTAGCCAGTGACCGGACAAGCTCC-CTGTT-CCCTGCTGGAATCTGCTTCC---AGGAGCTG-GGGAGAGG-AGGCTGGACAT--TGCTTCTGGCC--ACTGCCGGCAGCCTGTGTATCCTCCTCT---------------------------GACCCACCCTCCCCCGAGAGCGAACATCCCCGCTGGGGAAGACAACC-TGTGGGCTCATCTCCAGCCGCT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2260075 307 - 8137123 GTCAGTTTTCTTAGAGGAAACTG------------CTTCCCCTTCCTGGTAAGTATTGCTGATGAG---------------TTAATTTGTGAAGGAATTCTCATCTCCTAGAGCCTG-------GCAGACAGGGATCATCTGAAGCATTTGCCTGTGACCAGACAAACTCCTCTGTG-CCCTGACAGAATCAGCTTCTCTAAGGAGCTGGAAGAGAGGAAGGCCACATAC--AGCTCCTGTTCAGATTCCAAGTGCCACCTGTC---TCCTTC---------------------ACCTGGGACCCACCCTCTTACTGGAGGGGACATTTCAGT--GGGAAGAAAACCTTATTGTCTCATCACCGGCCACT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61047513 320 - 77573801 GCAGGTTTTCTTAAAGGAAGCTATGATCCGCTCTGCCTCCCCACC---AGAAGAGATGACAGTGGTCTCCCAGCTGTGAGGTTAATTTGTGGAGG-ACTCTCAGCT-CTGGAGTCAGAGCACACATAGATGGCAGTTGTCTGGAGCTTCATTGCATGGCTGGAGGACTTCC-CTGTGCCCCGGACAGGATTCCCCCTC----------------TAAG-GGACTAGACATACTGCTTCTGGCC--AC-----GTGCCATGTGTG---TCTTCTGACCCCCTCCATTTCCGCCCCACCCCTGACCCACCCTCTTATAGGAGGCAACATGCCAGCTGGGAAGGA-----------------TCCTGGCCACT i canFam3.chr6 I 106 C 0 a score=166849.000000 s hg38.chr7_KI270899v1_alt 155182 26 + 190869 GTGGTGACTATTGTCGTCCCCTTCAC s panTro5.chr7_NW_015973580v1_random 30166 26 - 83720 GTGGTGACTATTGCCATCCCCTTCAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 545239 26 + 162613886 GTGGTGACTATTGCCATCCCCTTCAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 116742 26 - 432965 GTGGTGACTATTGTCGTCCCCTTCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182701 26 + 85365473 GTGGTGACTATTATCGTCCCCTTCAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34022809 26 + 185818997 GTGGTGACTGTTGTCGTCCCCTTCAC i rheMac8.chr3 C 0 I 144 s macFas5.chr3 33638759 26 + 192294377 GTGGTGACTGTTGTCGTCCCCTTCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4405961 26 - 9440265 GTGGTGACTGTTGTCATCCCCTTCAC i macNem1.NW_012019910v1 C 0 I 144 s cerAty1.NW_012002954v1 16993763 26 - 21915920 GTGGTGACTGCTGTCGTCCCCTTCAC i cerAty1.NW_012002954v1 C 0 I 144 s chlSab2.chr28 129455 26 - 21531802 GTGGTGACTGTTGTCGTCCCCTTCAC i chlSab2.chr28 C 0 I 144 s manLeu1.NW_012101810v1 162696 26 - 2515279 GTGGTGACTGTTGTTGTCCCCTTCAC i manLeu1.NW_012101810v1 C 0 I 144 s colAng1.NW_012117710v1 321008 26 + 6586416 CTGGTGACTGTTGTCGTCCCCTTCAC i colAng1.NW_012117710v1 C 0 I 456 s saiBol1.JH378296 364259 26 - 2409723 GCTGAGACTACTGTCGTGCCCTTGAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 527772 26 - 2125214 GCTAAAACTACTATCGTGCCCGTCAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 115332 26 + 376347 GCTGAGACTACTGTCATGCCCTTCCG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2260382 11 - 8137123 GCCATGACCAT--------------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61047833 13 - 77573801 ------------GCCAAGCCTCCAG- i canFam3.chr6 C 0 C 0 e calJac3.chrUn_GL286444 48885 403 + 138751 M a score=14711.000000 s hg38.chr7_KI270899v1_alt 155208 6 + 190869 TCCGGA s panTro5.chr7_NW_015973580v1_random 30192 6 - 83720 TCTGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 545265 6 + 162613886 TCTGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 116768 6 - 432965 TCCGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182727 6 + 85365473 GCCGGA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33638785 6 + 192294377 CCCAGA i macFas5.chr3 C 0 I 138 s saiBol1.JH378296 364285 6 - 2409723 CCCAGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 527798 6 - 2125214 CCCAGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 115358 6 + 376347 CCCAGA i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61047846 6 - 77573801 CCCGGT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 321034 456 + 6586416 I e otoGar3.GL873611 2260393 0 - 8137123 C e chlSab2.chr28 129481 144 - 21531802 I e manLeu1.NW_012101810v1 162722 144 - 2515279 I e cerAty1.NW_012002954v1 16993789 144 - 21915920 I e macNem1.NW_012019910v1 4405987 144 - 9440265 I e rheMac8.chr3 34022835 144 + 185818997 I e calJac3.chrUn_GL286444 48885 403 + 138751 M a score=2333.000000 s hg38.chr7_KI270899v1_alt 155214 3 + 190869 -TGC s panTro5.chr7_NW_015973580v1_random 30198 3 - 83720 -TGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 545271 3 + 162613886 -TGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 116774 3 - 432965 -TGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182733 3 + 85365473 -TGC i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378296 364291 3 - 2409723 -GGC i saiBol1.JH378296 C 0 I 2 s cebCap1.NW_016107703v1 527804 3 - 2125214 -GGC i cebCap1.NW_016107703v1 C 0 I 2 s aotNan1.NW_018514293v1 115364 3 + 376347 -GGC i aotNan1.NW_018514293v1 C 0 I 2 s canFam3.chr6 61047852 3 - 77573801 CTG- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 321034 456 + 6586416 I e otoGar3.GL873611 2260393 0 - 8137123 C e chlSab2.chr28 129481 144 - 21531802 I e manLeu1.NW_012101810v1 162722 144 - 2515279 I e cerAty1.NW_012002954v1 16993789 144 - 21915920 I e macNem1.NW_012019910v1 4405987 144 - 9440265 I e macFas5.chr3 33638791 138 + 192294377 I e rheMac8.chr3 34022835 144 + 185818997 I e calJac3.chrUn_GL286444 48885 403 + 138751 M a score=1014862.000000 s hg38.chr7_KI270899v1_alt 155217 133 + 190869 T--CTTTCCCCCATG-GCCAGATGCCAGCAGGGTTTG-------------TCCCCAGGACCCTGCAGGAGATCCCCTCTTCATCATCCTGGGAGTGTGAC--------GTGGTCTG--C-------------TAAGCAAAGCTCCTTCCCTGCAGCAGGTGAGTCCTAGCTC s panTro5.chr7_NW_015973580v1_random 30201 135 - 83720 TGTCTTTCCCCCATG-GCCAGATGCCAGCAGGGTTTG-------------TCCCCAGGACGCTGCAGGAGATCCCCTCTTCATCATCCTGGGAGTATGAC--------GTGGTCTG--C-------------TAAGCAAAGCTCCTTCCCTGCAGCAGGTGAGTCCTAGCTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 545274 135 + 162613886 TGTCTTTCCCCCATG-GCCAGATGCCAGCAGGGTTTG-------------TCCCCAGGACGCTGCAGGAGATCCCCTCTTCATCATCCTGGGAGTGTGAC--------GTGGTCTG--C-------------TAAGCAAAGCTCCTTCCCTGCAGCAGGTGAGTCCTAGCTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 116777 135 - 432965 TATCTTTCCCCCATG-GCCAGATGCCAGCAGGGTTTG-------------TCCCCAGGACCCTGCTTGAGATCCCCTCTTCATCATCCTGGGAGTGTGAC--------GTGGTCTG--C-------------TAAGCAAAGCTCCTTCCCTGCAGCAGGTGGGTCCTAGCTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182736 135 + 85365473 TGTCTTTCCCCCATG-GCCAGATGCCAGCAGGGTTTG-------------TCCCCAGGACCCTGCAGGAGATACCCCCTTCATCATCCTGGGAGTGTGAC--------ATGGTCTG--C-------------TAAGCAAAGCTCCTTTCCTGCAGCAGGTGGGTCCTAGCTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34022979 133 + 185818997 --TCTTTCCCCCATG-GCCAGATGCCAGCAGGGTTTG-------------TACCCAGGACCCTGCAGGAGATGCCCTCGTCATCATCCTGGGAGTGTGGC--------GTGGTCTC--C-------------TAAGCTAAGATCCTTCCCTGCAGCAGATGGATCCCAGCTC i rheMac8.chr3 I 144 C 0 s macFas5.chr3 33638929 133 + 192294377 --TCTTTCCCCCGTG-GCCAGATGCCAGCAGGGTTTG-------------TACCCAGGACCCTGCAGGAGATGCCCTCGTCATCATCCTGGGAGTGTGGC--------GTGGTCTC--C-------------TAAGCTAAGATCCTTCCCTGCAGCAGATGGATCCCAGCTC i macFas5.chr3 I 138 C 0 s macNem1.NW_012019910v1 4406131 133 - 9440265 --TCTTTCCCCCATG-GCCAGATGCCAGCAGGGTTTG-------------TACCCAGGACCCTGCAGGAGATGCCCTCGTCATCATCCTGGGAGTGTGGC--------GTGGTCTC--C-------------TAAGCTAAGATCCTTCCCTGCAGCAGATGGATCCCAGCTC i macNem1.NW_012019910v1 I 144 C 0 s cerAty1.NW_012002954v1 16993933 133 - 21915920 --TCTTTCCCCGGTG-GCCAGATGCCAGCAGGGTTTG-------------TACCCAGGACCCTGCAGGAGATGCCCTCATCATCATCCTGGGAGTGTGGC--------GTGGTCTC--C-------------TAAGCTAAGATCCTTCCCTGCAGCAGATGGATCCCAGCTC i cerAty1.NW_012002954v1 I 144 C 0 s chlSab2.chr28 129625 135 - 21531802 --TCTTTCCCCCGTG-GCCAGATGCCAGCAGGGTTTG-------------TCCCCAGGACCCTGCCGGAGATGCCCTCGTCGTCATCCTGGGAGTGTGGT--------GTGGTCGCTGC-------------TAAGCTAAGATCCTTCCCGGCGGCAGACGGGTCCCAGCTC i chlSab2.chr28 I 144 C 0 s manLeu1.NW_012101810v1 162866 133 - 2515279 --TCTTTCCCCCGTG-GCCAGATGCCAGCAGGGTTTG-------------TACCCAGGACCCTGCAGGAGATGCCCTCGTCATCATCCTGGGAGTGTGGC--------GTGGTCTC--C-------------TAAGCTAAGATCCTTCCCTGCAGCAGATGGATCCCAGCTC i manLeu1.NW_012101810v1 I 144 C 0 s colAng1.NW_012117710v1 321490 135 + 6586416 --TCTTTCCCCCGTG-ACCGGATGCCAGCAGGGTTTG-------------TCCCCAGGACCCTGCAGGAGATGCCCTCGTCATCGTCCTGGGAGTGTGAC--------GTGGTCTCTGC-------------TAAGCAAAGATCCTTCCCTGCAGCAGATGGATCCCAGCTC i colAng1.NW_012117710v1 I 456 C 0 s saiBol1.JH378296 364296 125 - 2409723 --TCTTTCAGCCATG-GCCAGATGCCAGCAGCATTTG-------------TCCCCAGGACCCTGTGGGGCATCCCCTCTTCATCA-CCTTTGAGTGTGAC--------ATGGTCTG--C-------------TCAGCAAAACTCCTCCCCTGCAGCAGGTGCGTC------- i saiBol1.JH378296 I 2 C 0 s cebCap1.NW_016107703v1 527809 125 - 2125214 --TCTTTCTGCCATG-GCCAGATGCCAGCAGCATTTG-------------TCCCCAGGACCCTGTGGGGTGTTCCCTCTTCATCA-CTTTGGAGTGTGAC--------ATGGTCTG--C-------------TCAGCAAAGCTCCTCCTCTGCAGCAGGTGCGTC------- i cebCap1.NW_016107703v1 I 2 C 0 s aotNan1.NW_018514293v1 115369 124 + 376347 --TCTTTCCGCCATG-GCCAGATGCCAGCAGCGTTTA-------------TCCGCAGGACCCTGTAGGGCATCCCCTCTTCATCA-CTTTGGAG-GTGAC--------ATGGTCTG--C-------------TCAGCAAAGCTCCCCCCCTGCAGCAGCTGCGTC------- i aotNan1.NW_018514293v1 I 2 C 0 s otoGar3.GL873611 2260393 125 - 8137123 -----------CATGTACCTGATGCCTCTAGGGTTTGCTTCTTGGTGGATTCCTCGAGAACTCACAAGGGTTTCCCATAGCATC-TCTTGTAGATG----------------------T-------------TCAGCCAAGCTCCTCACCTGCAGTGGGTGCCCTCTAGCCC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61047855 145 - 77573801 ---ACTGTTCCCATA-GTGTGGTGCTA-CTCGGTCTG-------------TCCCC-----CTTGGTGGAG--CCCCTCAGCACCACCCCGGGGGTGTGACAGGGCTGAGCAGCCTC--CCACACAGGTGGATTAGGTGAACATACTGGGCCACAGCAGGTACCTTTTAGCCC i canFam3.chr6 C 0 C 0 e calJac3.chrUn_GL286444 48885 403 + 138751 M a score=1914005.000000 s hg38.chr7_KI270899v1_alt 155350 190 + 190869 AGAGGACACGGACGGTGATTTTCCAACTGTCGTGCTCAGAACAAACTTTCACATCCAAGAAATGTT-GCAGACATCCTAGAAAGGAT-GAATCAAACC-CACAGGCCCTCA-GGCCCCCATGCAACACTGTGCTGCCTTGGCACAGAAATATTTACAGCAGAGTTCCCGTGTGAGCCTGCAGACACAGCAACCA s panTro5.chr7_NW_015973580v1_random 30336 190 - 83720 AGAGGACACAGACGGTGATTTTCCAACTGTCGTGCTCAGAACAAACTTTCACATCCAAGAAATGTT-GCAGACATCCTAGAAAGGAT-GAATCAAACC-CACAGGCCCTCA-GGCCCCCATGCAACACTGTGCTGCCTTGGCACAGAAATATTTACAGCGGAGTTCCCGTGTGATCCTGCAGACACAGCAACCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 545409 190 + 162613886 AGAGGACACGGACGGTGATTTTCCAACTGTCGTGCTCAGAACAAACTTTCACATCCAAGAAATGTT-GCAGACATCCTAGAAAGGAT-GAATCAAACC-CACAGGCCCTCA-GGCCCCCATGCAACACTGTGCTGCCTTGGCACAGAAATATTTACAGTGGAGTTCCCGTGTGATCCTGCAGACACAGCAACCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 116912 190 - 432965 AGAGGACACGGACGGTGATTTTCCAACTATTGTGCTCAGAACAAACTTTCACATCCAAGAAATGTT-GCAGACATCCTAGAAAGGAT-GAATCAAACC-CACAGGCCCTCC-GGCCCCCATGCAACACTGTGCTGCCTTGGCACAGAAATATTTACAGCGGAGTTCCCATGGGATCCTGCAGACACAGCAACCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182871 189 + 85365473 AGAGAACACAGACAGTGGTTTTCCAACTATCGTGCTCAGAACAAACTTTCACATCCAAGAAGTGTT-GCAAACATCCTAGAAGGGAC-GAATCAAA-C-CACAGGCCCTCA-GGCCCCCGTGCGACACTGTGCTGCCTTGGCCCAGAAATATTTACGGCAGAGTTCCCGTGTGATCCTGCAAACACAGCAGCCA i nomLeu3.chr20 C 0 T 4994 s rheMac8.chr3 34023112 188 + 185818997 AGAGGACACGGATGGCGGTTTTCCAACTGTCGTGCTCAGAACAGACCTTCGCGTCCAAGAAATGTT-GCAGACATCCTAGAAAGGAT--AATCAAGCC-CACAGGCCCTCA-GGCCCCCGTGCGACCCTGTGATGCCTTGGCGCAGAAATATTGACAGCAGAGTTCCCGTGTCATCCTGCA-ACACAGCAGCCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33639062 188 + 192294377 AGAGGACACGGATGGCGGTTTTCCAACTGTCGTGCTCAGAACAGACCTTCGCGTCCAAGAAATGTT-GCAGACATCCTAGAAAGGAT--AATCAAGCC-CACAGGCCCTCA-GGCCCCCGTGCGACCCTGTGATGCCTTGGCGCAGAAATATTGACAGCAGAGTTCCCGTGTCATCCTGCA-ACACAGCAGCCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4406264 188 - 9440265 AGAGGACACGGATGGCGGTTTTCCAACTGTCGTGCTCAGAACAGACCTTCGCGTCCAAGAAATGTT-GCAGACATCCTAGAAAGGAT--AATCAAGCC-CACAGGCCCTCA-GGCCCCCGTGCGACCCTGTGATGCCTTGGCACAGAAATATTGACAGCAGAGTTCCCGTGTCATCCTGCA-ACACAGCAGCCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16994066 188 - 21915920 AGAGGACACGGATGGCGGTTTTCCAACTGTCGTGCTCAGAACAGACCTTCACGTTCAAGAAATGTT-GCAGACATCCTAGAAAGGAT--AATCAAGCC-CACAGGCCCTCA-GGCCCCCGTGCGACCCTGTGATGCCTTGGCGCAGAAATATTGACAGCAGAGTTCCCGTGTCATCCTGCA-ACACAGCAGCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 129760 187 - 21531802 AGAGGACACAGACGGCGGCTTTCCAGCTGTCGTGCTCGGAACAGACCTCCACGTCCAAGAAACGTT-GCCGACATCCTAGAAAGGAT--AATCAAACC-CACAGGTCCTCA-GG-CCCCGTGCGACCCTGTGATGCCTTGGCACAGAAATATTGGCGGCGGAGTTCCTGCGTCATCCTGCA-ACACAGCAGCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 162999 188 - 2515279 AGAGGACACGGATGGCGGTTTTCCAACTGTCGTGCTCAGAACAGACCTTCACGTCCAAGAAATGTT-GCAGACATCCTAGAAAGGAT--AATCAAGCC-CACAGGCCCTCA-GGCCCCCGTGCGACCCTGTGATGCCTTGGCGCAGAAATATTGACAGCAGAGTTCCCGTGTCATCCTGCA-ACACAGCAGCCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 321625 189 + 6586416 AGAGGACACGGACGGCGGTTTTCCAACTGTCGTGCTCAGAACAAACTTTCACTAACAAGAAATGTT-GCAGACATCCTAGAAAGGAT-AAAGTGAACC-CACAGGCCCTCG-GGCCCCCGTGCGCCCCTGTGCTGCCTTGGCACAGAAATATTGACAGCAGAGTTCCCGTGTCATCCTGCA-GCACAGCAGCCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 49288 191 + 138751 AGAGGACATGGACAGTGGTTTTCCAACTATCGTGCTCAGAACAAACTTTCACATCCAAGAAATGTT-GCGGGCATCCTGGAAAGGGT-AAATCAAACC-CAGAGGCCCTCATGGCCCCTGTGTGACATGGTGCTGCCTTGGCACAGAAATACTTACAGCAAAGTTCCCATGTGATCCTGCAAACACAGCAACCA i calJac3.chrUn_GL286444 M 403 C 0 s saiBol1.JH378296 364421 191 - 2409723 AGAGGACATGGACAGTGGTTTTCCAACTATTGTGCTCAGAACAAACTTTCACATCCAAGAAATGTT-GCGGGCATCTTGGAAAGGGT-AAATCAAACC-CACAGGCCCTCATGGCCCCTGTGTGGCACAGTGCTGCCTTGGCACAGAAATATTTACAGCCAAGTTCCCATGTGATCCTGCAAACACAGCAACCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 527934 191 - 2125214 AGAGGACATGGACAGTGGTTTTCCAACTATCGTGCTCAGAACAAACTTTCACATCCAAGAAATGTT-GCGGGCATCCTGAAAAGGGT-AAATCAAACC-CACAGGCCCTCATGGCCCCTGTGCAACATGGTGCTGCCTTGGCACAGAAATATTTACAGCAAAGTTCCCATGTGATCCTGCAAACACAGCAACCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 115493 191 + 376347 AGAGGACACGGACAGTGGTTTTCCAGCTATCGTGCTCAGAACAAACTTTCACATCCAAGAAATGTT-GCAGGCATCCTGGAAAGGGT-AAATCAAACC-CGCAGGCCCTCACGGGCCCTGTGCGACGCGGTGCTGCCTCGGCACAGAAATATTTACAGCCAAGTTCCCATGTGATCCTGCAAACACAGCAAGCG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2260518 189 - 8137123 AGAGGACATAGCCTATGGTTTTCAAATTATA--CCTAGGAACAAACTTTCATGCACCATAAATCTT-GAGAGCATCCTAAAAAGGGTTAAATCAAACC-CCGAGGTCCCCACTCCCTCCATGCAACACTCTGCTGCTTCAGTATAGAAATATTTACAGCAAAGTTCCTGTGAGATCCTGAAAATATA-CAACTA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61048000 159 - 77573801 AGAAAACA-AGCCAGCGGTTTTCAAACTGTTGTGCTCAGAGAGCACTTT-ACAAATCAGAAATATTGGCAGGCATCATAGGAAGGGT-GAAGCCAACCACAGAAGT------TGCCCCCATGCACCACCAGGCTGCTTTGGCATTGAGATGTTTATAGCAGTGTTCCC-------------------------- i canFam3.chr6 C 0 C 0 a score=1358946.000000 s hg38.chr7_KI270899v1_alt 155540 181 + 190869 TTTTTTATAACAGTTCTCCAAAGTCTCTCCTCTTGAAAACAGAGCAAGTTGCACCCTGGTCTCCGTATCACATCG-GCCTGCAGTTTCACACGATCTGCTTGGTTCGGA-GTGCTGTCTTTCAGACCTGGCTGTGGCCACATGCTCCTCACA----------------GC-TTGCACATCCCTCAGTCTCGGCACCACGC s panTro5.chr7_NW_015973580v1_random 30526 181 - 83720 TTTTTTATAACAGTTCTCCAAAGTCTCTCCTCTTGAAAACAGAGCAAGTTGTACCCTGGTCTCTGTATCACATCG-GCCAGCAGTTTCACACGATCTGCTTGGTTTGGA-GTGCTGTCTTTCAGACCTGGCTGTGGCCACATGCTCCTCACA----------------GC-TTGCACATCCCTCAGTCTCGGCACCACGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 545599 181 + 162613886 TTTTTTATAACAGTTCTCCAAAGTCTCTCCTCTTGAAAACAGAGCAAGTTGTACCCTGGTCTCCGTATCACATCG-GCCAGCAGTTTCACACGATCTGCTTGGTTCAGA-GTGCTGTCTTTCAGACCTGGCTGTGGCCACATGCTCCTCACA----------------GC-TTGCACATCCCTCAGTCTCGGCACCACGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 117102 181 - 432965 TTTTTTATAACAGTTCTCCAAAGTCTCTCCTCTTGAAAACAGAGCAAGTTGTACCCTGGTCTCCGTATCACATCG-GCCAGCAGTTTCACACGATCTGCTTGGTTCAGA-GTGCTGTCTTTCAGACCTGGCTGTGGCCACATACTCCTCACA----------------GC-TTGCACATCCCTCAGTCTTGGCACCACGC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34023300 181 + 185818997 TTTTTGTTGACAGTTCTCCAAAGTCTCTCTTCTCGAAAGCAGAGCAAGTCGTACCCCAGTCTCTGAATCACAGCA-GCCACAAGTTTCCCACAGTCTGCTTGGTTCGGAGGTGCTGTC-TTCAGGCCTGGCTGTGGCCACCAACTCCTCACA----------------GC-TTGCACCTCCATCAGTCTCGGCACCACGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33639250 181 + 192294377 TTTTTGTTGACAGTTCTCCAAAGTCTCTCTTCTCGAAAGCAGAGCAAGTCGTACCCCAGTCTCTGAATCACAGCA-GCCACAAGTTTCCCACAGTCTGCTTGGTTCGGAGGTGCTGTC-TTCAGGCCTGGCTGTGGCCACCAACTCCTCACA----------------GC-TTGCACCTCCATCAGTCTCGGCACCACGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4406452 181 - 9440265 TTTTTGATGACAGTTCTCCAAAGTCTCTCTTCTCGAAAGCAGAGCAAGTCGTACCCCGGTCTCTGAATCACAGCA-GCCACAAGTTTCCCACAGTCTGCTTGGTTCGGAGGTGCTGTC-TTCAGGCCTGGCTGTGGCCACCAACTCCTCACA----------------GC-TTGCACCTCCATCAGTCTCGGCACCACGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16994254 181 - 21915920 TTTTTGATGACAGTTCTCCAAAGTCTCTCTTCTCGAAAGCAGAGCAAGTCGCACCCCGGTCTCTGAATCACAGCA-GCCACCAGTTTCCCACAGTCTGCTTGGTTCGGAGGTGCTGTC-TTCAGGCCTGGCTGTGGCCACCAACTCCTCACA----------------GC-TTGCACCTCCATCAGTCTCGGCACCACGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 129947 181 - 21531802 TTTTTGATGACAATTCTCCAAAGTCTCTCTTCTCGAAAGCGGAGCCAGTCGCACCCCGGTCTCCGAACCACAGCG-GCCACCGGTTTCCCACAGTCTGCTTGGTTCGGAGGTGCTGTC-TTCAGACCTGGCTGTGGCCACCAACTCCTCACA----------------GC-TTGCACCTCCATCAGTCCCGGCACCACGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 163187 181 - 2515279 TTTTTGATGACAGTTCTCCAAAGTCTCTCTTTTCGAAAGCAGAGCAAGTCACACCCCGGTCTCTGAATCACAGCA-GCCACCAGTTTCCCACAGTCTGCTTGGTTCAGAGGTGCTGTC-TTCAGGCCTGGCTGTGGCCACCAACTCCTCACA----------------GC-TTGCACCTCCATCAGTCTCGGCACCACGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 321814 180 + 6586416 TTTTTGATAACAGTTATCCAAAGTCTCTCTTCTTGAAAGCGGAGGAAGTCGCACCCCGGTCTCCGAATCACAGCG-GCCACCAGTTTCCCACAGTCTGCTTGGTTCGCAGGTGCTGTC-TTCAGACCTGGCTGTGGCCACAAACTCCTCACA----------------GC-TTGCACCTCCATCAGTCTCAGCA-CACGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 49479 184 + 138751 TCTTTGATACCAGTTCTCTAAGGTCTCTCTTCTTGAAAGTAGAGCAAGTTGTAGCCTGGCCTCCTTATCACATTG-GCCACCAGTTTCACACAGTCTGCTTGGTTCAGG-GTGCTGCCTTTCAGA-----------CCTCATGCTCCTCACAGCATAGCACAGACATAGC-TGGT--ACCCATCAATCTTGGCACCATGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 364612 180 - 2409723 TCTTTGATACCGGTTCTCTAAAGTCTCTCTTCTTGAAAGCAGAGCAAGTTGTAGCC-----------------TG-TTCACCAGTTTCACACGGTCCGCTTGGTTCAGG-GTACTGCCTTTCAGACTTGGCTGTGGCCTCATGCTCCTCACAGCATAGCACAGACACAGC-TGGTACACCCATCAATCTTGGCACCACAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 528125 197 - 2125214 TCTTTGATACCAGTTCTCTAAAGTCTCTCTTCTTGAAAGCAGAGCAAGTTGTAGCCTGGCCTCCTTATCACATCG-GCCATCAGTTTCACACAGTCTGCTTGGTTCAGG-GTGCTGCCTTTCAGACCTGGCTGTGGCCTCATGCTCCTCACAGCATAGCACAGACACAGC-TGGTACACCCATCAATCTTGGTACCACGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 115684 194 + 376347 TCTTTGATACCAGTTCTCTAAAGTCTCTCTTCTTGAAAGCAGAGCGAGTTGTAGCCTGGCCTCCTTATCACGTCG-GCC-CGAGTTTCACA--GTCTGCTTGGTTCCGG-GTGCTGCGTTTCAGACCTGGCTGTGGCCTCATGCTCCTCACAGCATGGCACAGACACGGC-TGGTACACCCATCAGTCTTGGCACCATGC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2260707 184 - 8137123 TTTTTGATAACAGTTCTCCAAAGGCTCT--TCTTGAAACCAGAGCGAGTTGTACCC---TCATTGCATCACA-----CCACCAGTTTCACACAATCTGCTCAGCTCTGG-GTGTCATCTCGCAGGCCCAGCTGCCACTGCAAACTCCCCAGGGTGCAGCAGAGACATGGC-TCGCACATCCGCCAGGCTTGACAGC---- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61048159 129 - 77573801 --------------TCTCGGGTGT------TCTTGAAACCAGGG----------------CTTCATATCAAATCATGCCACTAGCTTCACACCATCTGCTCAGGCGAG--GTGCTGTC-TCAACGGCTGGCAG------------CCACACA----------------GCACGGCCCAGATATAACTCTCGAAGCC---- i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 183060 4994 + 85365473 T a score=987079.000000 s hg38.chr7_KI270899v1_alt 155721 108 + 190869 CACACGGGAGGGGTTCCACCACGTCTCTGAGCTTAGGGTGGCCGGTGGTGCCCAGGGGAGGGGGAAG-CCCGTGGCAGGCGTGGGATGGATTTGCTGAGTGACTCTAAC s panTro5.chr7_NW_015973580v1_random 30707 108 - 83720 CACACGGGAGGGGTTCCACCACGTCTCTGAGCTTAGGGTGGCCGGCGGTGCCCAGGGGAGGGGGAAG-CCCGTGGCAGGCGTGGGGTGGATTTGCTGAGTGACTGTAAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 545780 108 + 162613886 CACATGGGAGGGGTTCCACCACGTCTCTGAGCTTAGGGTGGCCGGCGGTGCCCAGGGGAGGGGGAAG-CCCGTGGCAGGCGTGGGGTGGATTTGCTGAGTGACTGTAAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 117283 108 - 432965 CACACGGGAGGGGTTCCACCACGTCTCTGAGCTTAGGGTGGCCGGCGGTGCCCAGGGGAGGGGGAAG-CCCGTGGCAGGCGTGGGGTGGATTTGCTGAGTGACTCTAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 178066 108 + 85365473 CACATGGGAGAGGTCCCACCACGTCTCTGAGCTTAGGGTGGCCGGTGGTGCCCAGGGGAGGGGGAAG-CCCGTGGCAGGTGTGGGGTGGGTTTGCTGAGCGACTCTAAC i nomLeu3.chr20 T 4994 C 0 s rheMac8.chr3 34023481 106 + 185818997 CACACGGGAGGGGTTCCACCACGTCTCTGAGCTCAGGGTGGCCGCTGGTGCCCAGGGGA-GGGGAAG-CCCGTGGCAGGTGTGGGGCAG-TTTGCTGAGTGACTCTAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33639431 106 + 192294377 CACACGGGAGGGGTTCCACCACGTCTCTGAGCTCAGGGTGGCCGCTGGTGCCCAGGGGA-GGGGAAG-CCCGTGGCAGGTGTGGGGCAG-TTTACTGAGTGACTCTAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4406633 106 - 9440265 CACACGGGAGGGGTTCCACCACGTCTCTGAGCTCAGGGTGGCCGCTGGTGCCCAGGGGA-GGGGAAG-CCCGTGGCAGGTGTGGGGCAG-TTTGCTGAGTGACTCTAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16994435 106 - 21915920 CACACAGGAGGGGATCCACCACGTCTCTGAGCTCAGGGTGGCTGCTGGTGCCCAGGGGA-GGGGAAG-CCCGTGGCAGGTGTGGGGCAG-TTTGCTGAGTGACTCTAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 130128 106 - 21531802 CGCACGGGAGGAGTTCCACCACGTCTCTGAGCTCAGGGTGGCCGCTGGTGCCCAGGGGA-GGGGAAG-CCCGTGGCAGGCGTGGGGCAG-TTTGCTGAGTGACTCTACC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 163368 106 - 2515279 CACACGGGAGGGGTTCCACCACGTCTCTGAGCTCAGGGTGGCCGCTGGTGCCCAGGGGA-GGGGAAG-CCCGTGGCAGGTGTGGGGCAG-TTTGCTGAGTGACTCTAAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 321994 105 + 6586416 CACACGGGAGGGGTTCCACCACGTCTCTGAGCTTAGGGTGGCCGCTGGTGCCCA-GGGA-GGGGAAG-CCCGTGGCAGGCGTGGGGTGG-TTTGCTGAGTGACTCTAAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 49663 107 + 138751 CACATGGGAGGGGTTCTACCACATCT-TGAGCTCAGGGGGGCTGGCAATGCCTGGGGTAGGGGGAAG-CCCATGGCAGGCACGTGGTGGGTTTGCTGAGTGACTCTAAC i calJac3.chrUn_GL286444 C 0 I 406 s saiBol1.JH378296 364792 107 - 2409723 CACATGGGAGGGGTTCTACCACATCT-TGAGCTCAGGGGGGCCGGCGGTGCCTGGGCGAGGGGGAAG-CCCATGGCAGGCATGTGGTGGGTTTTCTGAGTGACTCTAAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 528322 107 - 2125214 CACATGGGAGGGATTTTACCACACCT-TGAGCTCAGGGGGGCCGTCGGTACCTGGGGGAGGGGGAAG-CCCATGGCAGGCACATGGTGGGTTTGCTGAGTGACTCTAAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 115878 105 + 376347 CACATGGGAGGGGTTCTACCACACCT-TGAGCTCAGGGGGGCCAGCGGTGCCTGGGGGAGGGGGAAG-CCCACGGCAGGCACGTGGAGGGTTTGCTGAGTGA--CTAAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2260891 98 - 8137123 CACCTGGGAAGGTTCCCACCACGTCAGTGAAGTTGGGGT--CTGGCTGGGCCGAGGGGGGGTGCAATCCCCATGGCAGGCTCGTGGTGGGTTTGTTGAGT--------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61048288 70 - 77573801 --CGAGCAAGGGCTCCCACC---TCTGAGAGTTCAGGG--GCT-----------------TGGGCAG-CAGGCAGGAGGCATGGTGGAG-TCTGCT------------- i canFam3.chr6 C 0 C 0 a score=2216393.000000 s hg38.chr7_KI270899v1_alt 155829 279 + 190869 CACTCCTTATGGAATGAGCACCACCTCGCCAGGGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGGCTGC-AAGGTCCCTCTGGCAAACCTCCTTTCCCTCTGG------------GGCTGGTTGAGGACTCCAGGGGGCCAGCCTGGAGACCAAGGCCGTGCTGTGTGGTCAGCAGACCAGTGAGGAGTCAGCAGACCAGTGA-GGGGTCAGCGTTCTGCTGTGGCTGCCTGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGTGTCTGGGGAC-TGCCAAAACCTCTGCAGGGA s panTro5.chr7_NW_015973580v1_random 30815 279 - 83720 CACTCCTTATGGAACAAGCACCACCTCGCCAGCGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGGCTAC-AAGGTCCCTCCGGCAAACCTCCTTTCCCTCTGG------------GGCTGGTTGAGGACTCCAGGGGGCCAGCCTGGAGACCAAGGCCGTGCTGTGTGGTCAGCAGACCAGTGAGGAGTCAGCAGACCAGTGA-GGGGTCAGCGTTCTGCTGCGGCTGCCTGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGTGTCTGGGGAC-TGCCAAAACCTCTGCAGGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 545888 279 + 162613886 CACTCCTTATGGAACAAGCACCACCTCGCCAGGGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGGCTGC-AAGGTCCCTCCGGCAAACCTCCTTTCCCTCTGG------------GGCTGGTTGAGGACTCCAGGGGGCCAGCCTGGAGACCAAGGCCGTGCTGTGTGGTCAGCAGACCAGTGAGGAGTCAGCAGACCAGTGA-GGGGTCAGCGTTCTGCTGCGGCTGCCTGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGTGTCTGGGGAC-TGCCAAAACCTCTGCAGGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 117391 314 - 432965 CAGTCCTTATGGAATGAGCACCACCTCGCCAGGGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGGCTGC-AAGGTCCCTGTGGCAAACCTCCTTTCCCTCTGG------------GGCTGGTTAAGGACTCCAGGGGGCCAGCCTGGAGACCAAGGCCGTGCTGTGTG-------------------GTCAGCAGACCAGTGA-GGGGTCAGCGTTCTGCTGCGGCTGCCTGGACTCCTCTTCCTCTCAAGACAGCAGTGTCTGGGGAGACAGCAGTGTCTGGGGAGACAGCAGTGTCTGGGGAGACAGCAGTGTCTGGGGAC-TGCCAAAACCTTTGCAGGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 178174 242 + 85365473 CAGTCTTTATGGAATGAGCACCACCTCCCCAGGGGCATTGTCCTTGCCATCCTGGGGCCACACGTGTGGCTCCAAAGGTCCCTCTGGCAAACCTCCTTTCACTTTGG------------GGCTGCTTGAGGACTCTAGGGGGCCAGCCTGGAGACCAAGGCCATGCTGTGTG---------------------------------------GTCAGCACTCTGCTGCGGCCACCAGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGCGTCTGGGGAC-TGCCAAAACCTCTGCAGGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34023587 260 + 185818997 CAGCCCTTATGGAATGAGCATCACCTTGACAGCGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGACTCC-AAGGTCCTTCTGGCAAACCTCCTTTCCCTTTGG------------GGCTGGTTGAGGACTCCAGGTGGCCAGTCTGGACACCAGGGCCCTGCTGTGTG-------------------GTCGGCAGACCACTGA-GGGGTCAGTGCTCTGCTGCGGCCGCCAGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGGGTCTGGGGAC-CACCCAAAGCTCTGCATGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33639537 260 + 192294377 CAGCCCTTATGGAATGAGCATCACCTCGACAGCGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGACTCC-AAGGTCCTTCTGGCAAACCTCCTTTCCCTTTGG------------GGCTGGTTGAGGACTCCAGGTGGCCAGTCTGGACACCAGGGCCCTGCTGTGTG-------------------GTCGGCAGACCACTGA-GGGGTCAGTGCTCTGCTGCGGCCGCCAGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGGGTCTGGGGAC-CACCCAAAGCTCTGCATGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4406739 260 - 9440265 CAGCCCTTATGGAATGAGCATCACCTCGACAGCGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGACTCC-AAGGTCCTTCTGGCAAACCTCCTTTCCCTTTGG------------GGCTGGTTGAGGACTCCAGGTGGCCAGTCTGGACACCAGGGCCCTGCTGTGTG-------------------GTCGGCAGACCACTGA-GGGGTCAGTGCTCTGCTGCGGCCGCCAGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGGGTCTGGGGAC-CACCCAAAGCTCTGCATGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16994541 260 - 21915920 CAGCCCTTATGGAATGAGCATCACCTCGACAGCGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGACTCC-AAGGTCCTTCTGGCAAACCTCCTTTCCCTTTGG------------GGCTGGTTGAGGACTCCAGGTGGCCAGTCTCGACACCAGGGCCCTGCTGTGTG-------------------GTCGGCAGACCACTGA-GGGGTCAGTGCTCTGCTGCGGCCGCCAGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGGGTCTGGGGAC-CACCCAAAGCTCTGCATGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 130234 260 - 21531802 CAGCCCTTATGGAAGGAGCATCACCTCGCCGGGGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGACTCC-AAGGTCCCTCTGGCAAACCTCCTTTCCCTTTGG------------GGCTGGTTGAGGACTCTGGGTGGCCAGTCTGGAGACCAGGGCCCTGCTGTGTG-------------------GTCGGCACACCACTGA-GGGGTCAGTGCTCTGCTGCGGCCGCCAAGACTCCTCTTCCCCTCA------------------------------------------------------AGACAGCAGGGTCTGGGGAC-CACCAAAAGCTCTGCATGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 163474 260 - 2515279 CAGCCCTTATGGAATGAGCATCACCTCGACAGCGGCCTTGTCCTTGCCATCCTGGGGCCACACGTGTGACTCC-AAGGTCCTTCTGGCAAACCTCCTTTCCCTTTGG------------GGCTGGTTGAGGACTCCAGGTGGCCAGTCTGGACACCAGGGCCCTGCTGTGTG-------------------GTCGGCAGACCACTGA-GGGGTCAGTGCTCTGCTGCGGCCGCCAGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGGGTCTGGGGAC-CACCCAAAGCTCTGCATGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 322099 260 + 6586416 CAGCCCTTATGGAAGGAGCATCACCTCGCCAGTGGACTTGTCCTTGCCATCCTGGGGCCACACGTGTGACTCC-AAGGTCCCTCTGGCAAACCTCCTTTCCCTTTGG------------GGCTGGTGGAGGACTCTAGGTGGCCAGTCTGGAGACCAGGGTCCTGCTGTGTG-------------------GTCAGCAGACCACTGA-GGGGTCAGTGCTCTGCTGTGGCTGCCAGGACTCCTCTTCCTCTCA------------------------------------------------------AGACAGCAGGGTCTGGGGAC-TACCCAAAGCTCTGCATGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 50176 253 + 138751 CAGTCCTTACGGAATGAGCATCAGCTCGCCAGGGGCCTCATCCTAGCTATCCCGGGGCCACACATATGGCTCC-AAGGTCCCTCTGGCAAAACTCCTTTCC--------------------CTGGTTGAGGGCTCTAAGTGATCAGCCTGGAGACCAAAGCCATGCTGTTTG-------------------GTTAGTAGACCACTGAGGGGGTCAGCGCTCTGCTGTGGCTGCCAGGACTCCTCTTCCTCTGA------------------------------------------------------AGACAGCCATGTCTGGGGAC-CACCAAGAGCTCTGCATGGA i calJac3.chrUn_GL286444 I 406 I 133 s saiBol1.JH378296 364899 253 - 2409723 CAGTCCTTACGAAATGAGCATCAGCTCACCAGGGGCCTCGTCCTCGCCATCCTGGGGCCACACATGTGACTCC-AAGGTTCCTCTGGCAAAACTCCTTTCC--------------------CTGGTTGAGGGCTCTAAGTGGCCAGCCTGGAGACCAGAGCCATGCTGTTTG-------------------GTCAGCAGACCACTGAGGGGGTCAGCGCTCGGCTGCGGCTGCCAGGACTACTCTTCCTCTGA------------------------------------------------------AGACAGCCGTGTCTGGGGAC-TGCCAAGAGCTCTGCATGGA i saiBol1.JH378296 C 0 I 59 s cebCap1.NW_016107703v1 528429 252 - 2125214 CAGTCCTTATGGAATGAGCATCAGCTCACCCGGGGCCTCATTCTCGCCATCCTGGGGCCACACATGTGGCTCC-AAGGTCCCTCTGGCAAAACTCCTTTCC--------------------CTAGTTGAGGGCTCTATG-GGCCAGCCTGGAGACCAGAGCCGTGCTGTTCG-------------------GTCAGCAGACCACTGAGGGGGTCAGCACTCTGCTGTGGCTGCCAGGACTCCTCTTCCTCTGA------------------------------------------------------AGACAGCCGTGTCTGGGGAC-TGCCAAGAGCTCTGCATGGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 115983 238 + 376347 CAGTCCTTATGGAATGAGTATCAGCTCAGCAGGGGCCTCATCCTCGCCATCCTGGGGCCACACATGTGGCTCC-AAGGTCCCTCTGGCAAAACTCCTTTCC-----------------------------------AAGTGGCCAGCCTGGAGACCAGAGCCATGCTGTTTG-------------------GTCAGCAGACCACTGAGGGGGTCAGCGCTCTGCTGCGGCTGCCAGGACTCCTCTTCCTCTGA------------------------------------------------------AGACAGCCGTGTCTGGGGAC-CGCGAAGAGCTCTGCATGGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2260989 193 - 8137123 --------------------------------------------------------GTTGCACCTATGGGTTC-CAGCTCCCTAGTGCACATCTTCTTCCCCTGTGGAGCTAAAACTTAGGCTGTCTGAGGG-TCAAGGTAGCCAGCCAGGAGACCA--------------------------------------GCAAACCACTGA-GGGGCTAGCACTTTGCTGTGGCCTCCTGGGACCCTCTT----TCA------------------------------------------------------AGACAACCAGGTATAGGGACTTACCAAGAGCTCAGCACTGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61048358 79 - 77573801 -------------------------------------------------------------------------------------------------------------------------------------CACACAGTGCTGGCCTG---ACC-----------------------------------ATCAGCA-------------------GCTCCACTGCCACCGCCAGGGCATTGCTTC------------------------------------------------------------------------------AC-CCCCAACCGCGTTGTAGGCA i canFam3.chr6 C 0 C 0 a score=385110.000000 s hg38.chr7_KI270899v1_alt 156108 38 + 190869 CCAGCAGCACAGGATCACAGAATTCCACACTTCCTGCT s panTro5.chr7_NW_015973580v1_random 31094 38 - 83720 CCAGCAGCACGGGATCACAGAATTCCACACTTCCTGCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 546167 38 + 162613886 CCAGCAGCACAGGATCACTGAATTCCACACTTCCTGCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 117705 38 - 432965 CAAGCAGCACGGGATCACAGAATTCCACACTTCCTCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 178416 38 + 85365473 CGAGCAGCACAGGGTCACAGAATTCCACACTTCCTGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34023847 38 + 185818997 CCAGCAGCACAGGATCACAGAATTCCACGCTTCCTGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33639797 38 + 192294377 CCAGCAGCACAGGATCACAGAATTCCATGCTTCCTGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4406999 38 - 9440265 CCAGCAGCACAGGATCACAGAATTCCACGCTTCCTGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16994801 38 - 21915920 CCAGCAGCACAGGATCACAGAATTCCACGCTTCCTGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 130494 38 - 21531802 CCAGCAGCACAGGATCACAGAATTCCACGCTTCCTGCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 163734 38 - 2515279 CCAGCAGCACAGGATCACAGAATTCCACGCTTCCTGCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 322359 38 + 6586416 CAAGCAGCACAGGATCACAGAATTCCACGCTTCCTGCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 50562 38 + 138751 CCATCAGCATGGGATCAAGGAATTCCACGCTTCCTGCT i calJac3.chrUn_GL286444 I 133 C 0 s saiBol1.JH378296 365211 38 - 2409723 CCGTCAGCACGGGATCACAGAATTCCACGCTTCCTGCT i saiBol1.JH378296 I 59 C 0 s cebCap1.NW_016107703v1 528681 38 - 2125214 GGAGCAGTGCGGGATCACAGAATTCCACGGTTCCTGCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 116221 38 + 376347 GGAGCAGTGCGGGATCACAGAATTCCACGCTTCCTGCT i aotNan1.NW_018514293v1 C 0 I 79 s otoGar3.GL873611 2261182 38 - 8137123 TGAGCATCTCATAATCACAGAATTTCACTTTTCCTGCC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61048437 18 - 77573801 CCAGGAGTGTTCGACCGC-------------------- i canFam3.chr6 C 0 C 0 a score=73864.000000 s hg38.chr7_KI270899v1_alt 156146 23 + 190869 AAATCGG------------------------------------------------------------GGTCTC----------------------------------------CTTTTCATCC s panTro5.chr7_NW_015973580v1_random 31132 23 - 83720 AAATCGG------------------------------------------------------------GGTCTC----------------------------------------CTTGTCATCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 546205 23 + 162613886 AAATCGG------------------------------------------------------------GGTCTC----------------------------------------CTTGTCATCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 117743 23 - 432965 AAATCGG------------------------------------------------------------GATCTC----------------------------------------CTTTTCATCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 178454 23 + 85365473 AAATCAG------------------------------------------------------------GGTCTC----------------------------------------CTTTTCATCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34023885 23 + 185818997 AAATCGG------------------------------------------------------------GGTCTC----------------------------------------CTTTTCGTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33639835 23 + 192294377 AAATCGG------------------------------------------------------------GGTCTC----------------------------------------CTTTTCGTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4407037 23 - 9440265 AAATCGG------------------------------------------------------------GGTCTC----------------------------------------CTTTTCGTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16994839 23 - 21915920 AAATCGG------------------------------------------------------------GGTCTC----------------------------------------CTTTTCGTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 130532 23 - 21531802 AAATCGG------------------------------------------------------------GGTCTC----------------------------------------CTTTTCATCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 163772 23 - 2515279 AAATCGG------------------------------------------------------------CGTCTC----------------------------------------CTTTTCGTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 322397 23 + 6586416 AAATCGG------------------------------------------------------------GGTCTC----------------------------------------CTTTTCATCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 50600 122 + 138751 -AATTGGTGATCTCCTGTTCATCCGTCAGCACAGAATCACAGAATTCCACGCTTCCTGCTAATCGTTGATCTCTTCATCCATCAGCATCCATGCTTCCTGCCGTATTGGTGATCTTTTCATCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 365249 63 - 2409723 -AATTGG-----------------------------------------------------------TGATCTCTTCATCCATCAGCAGCCGTGCTTCCTGCCATATTGGTGATCTTTTCATCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 528719 23 - 2125214 -AATCAG-----------------------------------------------------------TGATCTC----------------------------------------CTTTTCATCC i cebCap1.NW_016107703v1 C 0 I 157 s otoGar3.GL873611 2261220 19 - 8137123 ------------------------------------------------------------------------------------------------------ATGTTAATG--ATTTCCACCC i otoGar3.GL873611 C 0 I 20 s canFam3.chr6 61048455 4 - 77573801 ---------------------------------------------------------------------TCTC-------------------------------------------------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=6210011.000000 s hg38.chr7_KI270899v1_alt 156169 777 + 190869 GTCACAT---CTCCCTTCCCGACTGCACCATCAACATCAG-------------TTCCTCATCTCCACAGCCACCAAGGGCAGCTCAGC-TCAAGCTCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGATGG-------AGAGAGGCCCCAGTCCCAGGCAGCCACGAGGACGGCGCCTGTCCAGACACACAAAGCAAGGGCCCCGCAGGAGAAGCAAGCCTCCCTCACTCCAGA-TGCCTCGCCA-----------------------------------------TGAAGCCGTAC-AC-CC--ACCCAGCCGACCTGCA----CGCGAGAGCTGCTCATTCGTTTTTCGGCTCGGCAGCTGCACGACCTTGTGGGTTCCTGAGCTGCTGGCTGGGAAGCTGAGGTTGGactcagacaggcaggaggcacgc--aggccccggagtgaggcgccaccgtggctcagggcagagaatgctgatctgaggagggaacatctaaactaaggcttggagggt--------------gggtgg-------tcg--------ggggcgagggaggagTGTGCCCCAGCCTCCTATCTGACCTGAACGTGCCC------ATTTCCATCTTGGCAGGTGCTGAGGCAGTGATGCTGCCGGGC----------GGTTCCACGGCCTCTCTCCCCAG--------------------------GGCTCTGAGTGTCAG-------GTGGGGGTCCAGGCTGAGGCTCAAGTC-AGGTCTGCTC----TGTGTGCCCCTCACTCTGCTGAGCTCCAGGCATGTTT-----TTCCTGA-----AG-----CCGATTCCCTGGAACACATTG-CAGGGCCTGCGGACATC-CACCAGCGTCCACGTG------GTCAAAGCCCACCTTA-G-----TGGGGTGGAG-AAAAATGTTCCTTCCATGGCCATC--AGG s panTro5.chr7_NW_015973580v1_random 31155 776 - 83720 GTCACAT---CTCCCTTCCCGACTGCACCATCAACATCAG-------------TTCCTCATCTCCACAGCC-CCAAGGGCAGCTCAGC-TCAAGCTCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGATGG-------AGAGAGGCCCCAGTCCCAGGCAGCCACGAGGACGGCGCCTGTCCAGACACACAAAGCAAGGGCCCCGCAGGAGAAGCAAGCCTCCCTCACTCCAGA-TGCCTCGCCG-----------------------------------------TGCAGCCGTAC-AC-CC--ACCCAGCCGACCTGCA----CGCGAGAGTTGCTCTTTCGTTTTTCGGCTCGGCAGCTGCACGACCTTGTGGGTTCCCGAGCTGCTGGCTGGGAAGCTGAGGTTGGACTcagacaggcaggaggcacgc--aggcCCTGGAGTGAGGCGCCACCGTGGCTCAgggcagagaatgctgatctgaggagggaacacctaaactaaggcttggagggt--------------gggtgg-------TCG--------GGGGCGAGGGAGGAGTGTGCCCCAGCCTCCTATCTGACCTGAACGTGCCC------ATTTCCGTCTTGGCAGGTGCTGAGGCAGTGATGCTGCCGGGC----------GGTTCCACGGCCTCTCTCCCCAG--------------------------GGCTCTGAGTGTCAG-------GTGGGGGTCCAGGCTGAGGCTCAAGTC-AGGTCTGCTC----TGTGTGCCCCTCACTCTGCTGAGCTCCAGGCATGTTC-----TTCCTGA-----AG-----CCAATTCCCTGGAACACATTG-CAGGGCCTGCAGACATC-CACCAGCGTCCACGTG------GTCAAAGCCCACCTTA-G-----TGGGGTGGAG-AAAAATGTTCCTTCCATGGCCATC--AGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 546228 777 + 162613886 GTCACAT---CTCCCTTCCCGACTGCACCATCAACATCAG-------------TTCCTCATCTCCACAGCCACCAAGGGCAGCTCAGC-TCAAGCTCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGATGG-------AGAGAGGCCCCAGTCCCAGGCAGCCACGAGGACGGCGCCTGTCCAGACACACAAAGCAAGGGCCCCGCAGGAGAAGCAAGCCTCCTTCACTCCAGA-TGCCTCGCCG-----------------------------------------TGCAGCCGTAC-AC-CC--ACCCAGCCGACCTGCA----CGCGAGAGTTGCTCTTTCGTTTTTCGGCTCGGCAGCTGCACGACCTTGTGGGTTCCCGAGCTGCTGGCTGGGAAGCTGAGGTTGGACTCAGACAGGTAGGAGGCACGC--AGGCCCTGGAGTGAGGCGCCACCGTGGCTCAgggcagagaatgctgatctgaggagggaacacctaaactaaggcttggagggt--------------gggtgg-------TCG--------GGGGCGAGGGAGGAGTGTGCCCCAGCCTCCTATCTGACCTGAACGTGCCC------ATTTCCATCTTGGCAGGTGCTGAGGCAGTGATGCTGCCGGGC----------GGTTCCACGGCCTCTCTCCCCAG--------------------------GGCTCTGAGTGTCAG-------GTGGGGGTCCAGGCTGAGGCTCAAGTC-AGGTCTGCTC----TGTGTGCCCCTCACTCTGCTGAGCTCCAGGCATGTTC-----TTCCTGA-----AG-----CCAATTCCCTGGAACACATTG-CAGGGCCTGCAGACATC-CACCAGCGTCCACGTG------GTCAAAGCCCACCTTA-G-----TGGGGTGGAG-AAAAATGTTCCTTCCATGGCCATC--AGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 117766 776 - 432965 GTCACAT---CTCCCTTCCCGACTGCACCATCAACATCAG-------------TTCCTCATCTCCACAGCCACCAAGGGCAGCTCAGC-TCAAGCTCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGATGG-------AGAGAGGCCCCAGTCCCAGGCGGCCATGAGGACGGCGCCTGTCCAGACACACAAAGC-AGGGCCCCGCAGGAGAAGCAAGCCTCCCTCACTCCAGA-TGCCTCGCCG-----------------------------------------TGCAGCCGTAC-AC-CC--ACCCAGCCGACCTGCA----CGCGAGAGCTGCTCATTCGTTTTTCGGCTCGGCGGCTGCACGACCTTGTGGATTCCCAAGCTGCTGGCTGGGAAGCTGAGGTTGGactcagacaggcaggaggcacgc--aggccctggagtgaggcgccaccgtggctcagggcagagaatgctgatctgaggagggaacatctaaactaaggcttggagggt--------------gggtgg-------tcg--------ggggcgagggaggagTGTGCCCCAGCCTCCTATCTGACCTGAACGTGCCC------ATTTCCGTCTTGGCAGGTGCTGAGGCAGTGATGCTGCCGGGC----------GGTTCCACGGCCTCTGTCCCCAG--------------------------GGCTCTGAGTGTCAG-------GTGGGGGTCCAGGCTGAGGCTCAAGTC-AGGTCTGCTC----TGTGTGCCCCTCACTCTGCTGAGCTCCAGGAATGTTC-----TTCCTGA-----AG-----CCGATTCCCTGGAACACATTG-CAGGGCCTGCGGACATC-CACCAGCGTCCACGTG------GTCAAAGCCCACCTTA-G-----TGGGGTAGAG-AAAAATGTTCCTTCCATGGCCATC--AGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 178477 777 + 85365473 ATCACAT---CTCCCTTCCCGACTGCACCATCAACGTCAG-------------TTCCTCGTCCCCACAGCCACCAAGGGCAGCTCAGC-TCGAGCTCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGGTGG-------AGAGAGGCCCCAGTCCCAGGCGGCCGCGAGGATGGCGCCTGTCCAGCCACACAAAGCAAGGGCCCCGCAGGAGAAGCAGGCCTCCCTCACCCTAGA-TGCCTTGCCG-----------------------------------------TGCAGCCGTACAAC-CC--ACCCAGCCGACCTGCA----CGCCAGAGCTGCTCATTCGTTTTTCGGCTCGGCAGCTGCATGACCTTGGGGGTTCCCGAGCTGCTGGCTGGGAAGCTGAGGTTGGactcagacaggcaggaggcacgc--aggccccggagtgaggcaccaccgtggctcaggacagagaatgctggtctgaggagggaacgtctaaactgaggcttggagggt--------------gggtgg-------ttg--------ggggcgagggaggagtgtgctccagCCTCCTGTCTGACCTGAATGTGCCC------ATTTCCGTCTTGGCAGGTGCTGAGGCAGTGACGCTGCCAGGC----------GGTTCCACGGCCTCTGCCCCCAG--------------------------GGCTCTGAGTGTCAG-------GTGGGGGTCCAGGCTGCGGCT-GGGTC-GGGTCTGCTC----TGTGTGCCCCTCACTGTGCTGGGCTCCAGGCTTGTTC-----TTCCTGA-----AG-----CCGATTCCCTGGAACACATTG-CAGGGCCTGCCGACATC-CATCAGTGTCCACATG------GTCAAAGCCCACCTTA-G-----TGGGGTAGAG-AAAAGTGTTCCTTCCATGGGCATC--AGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34023908 801 + 185818997 GTCACAT---CCCCCTTCCCAACTGCACCAGCAACATCAG-------------TGCCTCATCCCTGCAGCCACCAAGGGCAGCTCAGC-TCGAGTGCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGGTAG-------AGAGAGGCCCAAGTCCCAGGCGGCCATGTGGACGATGCCTGTCCAGCCACACAAAGCAAGGTCCCCTCAGGAGAAGCGAGC-TCCCCTACTCTAGA-TGCCTCGCCA-----------------------------------------TGCAGCCATAC-ATGCC--ACCTGGCCGACCTGCA----CCTGGGAGTTGCTCATTTGTTTTTCGGCTCAGCAGCTGCACGACCTGGGGGGTTCCCGAGCTGCTGGCT-GGAAGCCGAGGTCGGACTCAGACAGGCAGGAGGCACAC--AGGCTCCGGAGGGAGGCGCCACCATGGCTCAGGGCAGAGAACGCTGGTCTGCAGAGGGAACGTCTAAACTGAGGCTTGGAGGGT--------------GGGTGG-------TTG--------GGGGCGAGGGAGGAGTGTGCCCCAGCCTCCTCTCTGACCGAAACGTGCCC------ATTTCTGTGTTGGCAGGTGTCGAGGCAGTGGGGCTGCCGGGT----------GGTTCCATGGCCTCGGCCCCCAGTGGGCACAGGCGAGTCTCTTGCTCGCGGCCCTGAGTGTCGG-------GT-GGGGTCCAGGCTGCGGCTCGGGTC-GGGTCTGCTC----TGCGCACCCCTCACTCTGCTGAGCCCCAGGCATGTTC-----CTCCCGA-----AG-----CCAATTTCCTGGAACACATGG-CAGGGCCTGCGGACATC-CACCAGTGCCCACATG------GCCAAAGCCCACCTTA-G-----CGGGGCGGAG-AAAAATGTCCCTTCCACGGCCGTC--AGG i rheMac8.chr3 C 0 I 12 s macFas5.chr3 33639858 801 + 192294377 GTCACAT---CCCCCTTCCCGACTGCACCAGCAACATCAG-------------TGCCTCATCCCTGCAGCCACCAAGGGCAGCTCAGC-TCGAGTGCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGGTGG-------AGAGAGGCCCAAGTCCCAGGCGGCCATGTGAACGATGCCTGTCCAGCCACACAAAGCAAGGTCCCCTCAGGAGAAGCGAGC-TCCCCTACTCTAGA-TGCCTCGCCA-----------------------------------------TGCAGCCATAC-ATGCC--ACCTGGCCGACCTGCA----CCTGGGAGTTGCTCATTTGTTTTTCGGCTCAGCAGCTGCACGACCTGGGGGGTTCCCGAGCTGCTGGCT-GGAAGCCGAGGTCGGACTCAGACAGGCAGGAGGCACAC--AGGCTCCGGAGGGAGGCGCCACCATGGCTCAGGGCAGAGAACGCTGGTCTGCAGAGGGAACGTCTAAACTGAGGCTTGGAGGGT--------------GGGTGG-------TTG--------GGGGCGAGGGAGGAGTGTGCCCCAGCCTCCTCTCTGACCGAAACGTGCCC------ATTTCTGTGTTGGCAGGTGTCGAGGCAGTGGGGCTGCCGGGT----------GGTTCCATGGCCTCGGCCCCCAGTGGGCACAGGCGAGTCTCTTGCTCGCGGCCCTGAGTGTCGG-------GT-GGGGTCCAGGCTGCGGCTCGGGTC-GGGTCTGCTC----TGCGCACCCCTCACTCTGCTGAGCCCCAGGCATGTTC-----CTCCCGA-----AG-----CCAATTTCCTGGAACACATGG-CAGGGCCTGCGGACATC-CACCAGTGCCCACATG------GCCAAAGCCCACCTTA-G-----CGGGGCGGAG-AAAAATGTCCCTTCCACGGCCGTC--AGG i macFas5.chr3 C 0 I 2 s macNem1.NW_012019910v1 4407060 801 - 9440265 GTCACAT---CCCCCTTCCCGACTGCACCAGCAACATCAG-------------TGCCTCATCCCTGCAGCCACCAAGGGCAGCTCAGC-TCGAGTGCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGGTGG-------AGAGAGGCCCAAGTCCCAGGCGGCCATGTGGACGGTGCCTGTCCAGCCACACAAAGCAAGGTCCCCTCAGGAGAAGCGAGC-TCCCCTACTCTAGA-TGCCTCGCCA-----------------------------------------TGCAGCCATAC-ATGCC--ACCTGGCCGACCTGCA----CCTGGGATTTGCTCATTTGTTTTTCGGCTCAGCAGCTGCACGACCTGGGGGGTTCCCGAGCTGCTGGCT-GGAAGCCGAGGTCGGACTCAGACAGGCAGGAGGCACAC--AGGCCCCGGAGGGAGGCGCCACCATGGCTCAGGGCAGAGAACGCTGGTCTGCAGAGGGAACGTCTAAACTGAGGCTTGGAGGGT--------------GGGTGG-------TTG--------GGGGCAAGGGAGGAGTGTGCCCCAGCCTCCTCTCTGACCGAAACGTGCCC------ATTTCCGTGTTGGCAGGTGTCGAGGCAGTGGGGCTGCCGGGT----------GGTTCCATGGCCTCGGCCCCCAGTGGGCACAGGCGAGTCTCTTGCTCGCGGCCCTGAGTgtcgg-------gt-ggggtccaggctgcggctcgggtc-gggtcTGCTC----TGCGCACCCCTCACTCTGCTGAGCCCCAGGCATGTTC-----CTCCCGA-----AG-----CCAATTTCCTGGAACACATGG-CAGGGCCTGCGGACATC-CACCAGTGCCCACATG------GCCAAAGCCCACCTTA-G-----CGGGGCGGAG-AAAAATGTCCCTTCCACAGCCGTC--AGG i macNem1.NW_012019910v1 C 0 I 2 s cerAty1.NW_012002954v1 16994862 801 - 21915920 GTCACAT---CCCCCTTCCCGACTGCACCAGCAACATCAG-------------TGCCTCGTCCCCGCAGCCACCAAGGGCAGCTCAGC-TCGAGTGCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGGTGG-------AGAGAGGCCCAAGTCCCAGGCGGCCATGTGGACGGTGCCTGTCCAGCCACACAAAGCAAGGTCCCCGCAGGAGAAGCGAGC-TCCCCTACTCTAGA-TGCCTCGCCA-----------------------------------------TGCAGCCGTAC-ATGCC--ACCTGGCCGACCTGCA----CCTGGGAGTTGCTCATTTGTTTTTCGGCTCAGCAGCTGCACGACCTGGGGGGTTCCCGAGCTGCTGGCT-GGAAGCCGAGGTCGGACTCAGACAGGCAGGAGGCACAC--AGGCCCCGGAGGGAGGCGCCACCGTGGCTCAGGGCAGAGAACGCTGGTCTGCGGAGGGAACGTCTAAACTGAGGCTTGGAGGGT--------------GGGTGG-------TTG--------GGGGCGAGGGAGGAGTGTGCCCCAGCCTCCTCTCTGACCGAAACGTGCCC------ATTTCCGTGTTGGCAGGTGTCGAGGCAGTGGGGCTGCCGGGT----------GGTTCCATGGCTTCGGCCCCCAGTGGGCACAGGCGAGTCTCTTGCTCGCAGCCCTGAGTgtcgg-------gt-ggggtccaggctgcggctcgggtc-gggtcTGCTC----TGCGCACCCCTCACTCTGCTGAGCCCCAGGCATGTTC-----CTCCCGA-----AG-----CCAATTTCCTGGAACACATGG-CAGGGCCTGTGGACATC-CACCAGTGCCCACATG------GCCAAAGCCCACCTTA-G-----CGGGGCAGAG-AAAAATGTCCCTTCCACGGCCGTC--AGG i cerAty1.NW_012002954v1 C 0 I 2 s chlSab2.chr28 130555 843 - 21531802 GTCACAT---CCCCCTTCCCGACTGCACCATCAACATCAG-------------TGCCTCATCCCCGTAGCCACCAAGGGCAGCTCAGC-TCGAGCGCTAGGACTGGCCACCCCTCTTCCTGGACTGTGGTGGTGG-------AGAGAGGCCCGAGTCCCAGGCGGCCACGAGGACGGTGCCTGTCCAGCCACACAAAGCAAGGTCCCCGCAGGAGAAGCGAGCTTCCCCCTCTCTAGA-TGCCTCGCCGTGCAGCCGTACACCCCACCCGGCCAACCTGCACGTGGGAGTTGCAGCCGTAC-ACCCC--ACCCGGCCGACCTGCA----CCTGGGAGTTCCTCATTTGTTTTTTGGCTCAGCAGCTGCACGACCTGGGGGGTCCCAGAGCTGCCGGCT-GGAAGCCGAGGTTGGACTCAGACAGGGAGGAGGCACGC--AGGCCCCGGAGGGACGTGCCACCACTGCTCAGGGCAGAGAACACTGGTCTGCGGAGGGAACGTCTAAACTGAGGCTTGGAGGGT--------------GGGTGG-------TTG--------GGGGCGAGGGAGGAGTGTGCCCCAGCTTCCCCTCTGACCTCAACGTGCCC------GTTTCCGTGCTGGCAGGTGTCGGGGCAGTGGGGCTGCCGGGC----------GGTTCCACGGCCTCGGCCCCCAGTGGGCACAGGCCAGTCCCTTGCTCGCGGCCCTGAGTgtcgg-------gt-ggggtccaggctgcggctcgggtc-gggtcTGCCC----TGCGTTCCCCTCACTCTGCTGAGCCCCCGGCATGTTC-----TTCCTGA-----AG-----CCGATTCCCTGGAACACACGG-CAGGGCCTGCGGACATC-CACCGGCACCCACACA------GCCAAAGCCCACCTTA-G-----AGGAGCGGAG-AAAAACGTCCCTTCCACGGCCATC--GGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 163795 803 - 2515279 GTCACAT---CCCCCTTCCCGACTGCACCAGCAACATCAG-------------TGCCTCGTCCCCGCAGCCACCAAGGGCAGCTCAGC-TCAAGTGCTAGGACTGGCCACCCCTCTTCCTGGACTGTGATGGTGG-------AGAGAGGCCCAAGTCCCAGGCGGCCATGTGGACGGTGCCTGTCCAGCCACACAAAGCAAGGTCCCCGCAGGAGAAGCGAGC-TCCCCTACTTTAGA-TGCCTCACCA-----------------------------------------TGCAGCCGTAC-ATGCC--ACCTGGCCGACCTGCA----CCTGGGAGTTGCTCATTTGTTTTTCAGCTCAGCAGCTGCACGACCTGGGGGGTTCCCGAGCTGCTGGCT-GGAAGCCGAGGTCGGACTCAGACAGGCAGGAGGCACAC--AGGCCCCGGAGGGAGGCACCACCGTGGCTCAGGGCAGAGAACGCTGGTCTGTGGAGGGAACGTCTAAACTGAGGCTTGGAGGGT--------------GGGTGG-------TTG--------GGGGCGAGGGAGGAGTGTGCCCCAGCCTCCTCTCTGACCGAAACGTGCCC------ATTTCCGTGTTGGCAGGTGTCGAGGCAGTGGGGCTGCCGGGT----------GGTTCTATGGCCTCGGCCCCCAGTGGGCACAGGCGAGTCTCTTGCTCGTGGCCCTGAGTgtcgg-------gt-ggggtccaggctgcggctcgggtc-gggtcTGCTC----TGCGCACCCCTCACTCTGCTGAGCCCCAGGCATGTTC-----CTCCCGA-----AG-----CCAATTTCCTGGAACACATGG-CAGGGCCTGCGGACATC-CACCAGTGCCCACATG------GCCAAAGCCCACCTTA-G-----CGGGGCGGAG-AAAAATGTCCCTTCCACGGCCGTCAGGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 322420 802 + 6586416 ATCATAT---CCCCCTTCCCGACTGCACCAGCAACATCAG-------------TGCCTCGTCCCCGCAGCCACCAAGGGCAGCTCAGC-TCGAGTGATAGGACTGGCCACCCCTCTTCCTGGACTGTGGTGGTGG-------AGAGAGGCCCAAGTCCCAGGCGGCCACGAGGACAGTGCCTGTCCAGCCACACAAAGCAAGGTCCCCGCAGGAGAAGCCAGCCTCCCCAACTCTCGA-TGCCTCG-CG-----------------------------------------TGCGGCCATAC-GCCCC--ACCCGGCCGACCTGCA----CGTGGGAGCTGCTCATTTGTTCTTCGGCTCAGCAGCTGCACGACCTGGGGGGTTCCCGAGCTGCTGGCT-GGAAGCTGAGGTTGGACTcagacaggcaggaggcacgc--aggcCCCGGAGTGAGGCGCCACCGTGGCTTAGGGCAGAGAACGCTGGTCTGAGAAGGGAACGTCTAAAGTGAGGCTTGGAGGGT--------------GGGTGG-------TTG--------GGGGCAAGGGAGGAGTGTGCCCCAGCCTCCTCTCTGACCTCAACGTGCCC------GTTTCCATGTTGGCAGGTGTCGAGGCAGTGGGGCTGCCGGGT----------GGTTCCACGGCCTCGGCCCCTAGTGAGCACAGGCGAGTCTCTCGGTCGCGGTTCTGAGTGTCGG-------GTGGGGGTCCAGGCTGCGGCTCGGGTC-AGGTCTGCTC----TGCGTATCCCTCACTCTGCTGAGCTCCAGGCATGTTC-----TTCCTGA-----AG-----CCGATTCCCTGGAACACATGG-CAGGGCCTGCGGACATC-CACCAGCGCCCACATG------GCCAAAGCCCACCTTA-G-----AGGGGTGAAG-AAAAACGACCCTTCCCTGGCCTTC--AAG i colAng1.NW_012117710v1 C 0 I 2 s calJac3.chrUn_GL286444 50722 795 + 138751 GTCAAAT---CTCCCTTCCCAATTGTACCATCAACATCAG-------------TTCCTCATCCCCACAGCCCCCGAGGGCAGCTCAGC-TCAACCTCTAGGACTGGCCACCCC-CTCCCTGTACTGTGATATTGG-------AGAGAGACCCAGGGCCAAGGCAGCCAAAAGGACGGTACCTGACCAGCCAAACAAAGCAAGGGCCCAGCAGGAGAAACAAGCCTCCCTTGCTCTAGC-TGCCTCCTTG-----------------------------------------TGCAGCCATAC-GCCACC-ACCCAGCCAACCTGCA----TGTGAGAGTTGCTCATTGGCTCTTCAGCTTGGCAGCTGCACAATCTTCGGGGTTCCCGAGCTGCTAGCCAGGAAGCCGAGGTTGGACTCAGACAGGCAGGAGGCACAC--AAGCCCTGGAGTGAGGCACCA-----------GGTAGAGAATGCTGGTCTGAGGAAGAAACATCTAAACTGAGGCTTGGAAGGT--------------AGGTGG-------TTG--------GGGGCAAGGGAGGGGTGTGCCCCAGCCTCCTACCTGACCTGAACATGCCC------AGTTTCACCTTGGCAGCTGCTGAAGCAGTGGCACTGCTGGGT----------GATTCCACAGCCTCTGCCCGCAGTGAGCACAGATAAGCCTCTTGCTCAGGGCTCTGAGTGTGGG-------GTAGGGGTCCAGGCTGCAGCTCAGGTC-AGGTCTGCTT----TGTGTGCCCCTCACTCTGCTGCACTGCAGACATGTTC-----TTCCTGA-----AG-----CTGACTCCCTGGAACACATTA-CAGGGCCTGTGGATATC-AACCAGTGCCCACGTG------GCAAAAGCCCCCCTTAGG-----TGGGGTGGAGAAAATATGTCCCTTCCATGACCATC--AGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 365312 793 - 2409723 GTCAAAT---CTCCCTTCCTAATTGTACCATCAACATCAA-------------TTCCTCATCCCCATAGCCCCTGAGGGCAGCTTAGG-TCGACCTCTAGGACTGGCCACCCC-CTCCCTGGACTGTGATATTGG-------AG-GAGACCCAGGGCCAAGGCAGCCAAAAGGACGGTCCCCGATCCGCCACACAAAGCAAGGGCCCAGCAGGAGAAACAAGCCCCCATCGATCCAGC-TGCCTCTTTG-----------------------------------------TGCAGCCATAC-GCCCCCAACCCAGCCAACCTGCG----TGTGAGAGTTGCTCATTGGCTCTTCGGCTTGTCAGCTGCGTGATCTTGAGGGTTCCCGAGCTGCTCACCAGGAAGCTGAGGTTGGACTCAGACAGGCAGGAGGCACAC--AGGCCCTGAAGTGAGGCACCA-----------GGCAGAGAATGCTGGTCTGAGGAGGGAACACCTAAACTGAGGCTTAGAGGGT--------------AGGTGG-------TTG--------GGGGTAAGGGAGGGGTGTGCCCCAGCCTCCTGCCTGACCTAAACATGCCT------ATTTTCATCTTGGCAGGTGCTGATGCAGCGGCACTGCTGGGT----------GGTTCCACAGCCTCTGCCCGCAGTGAGCACAGATGAGCCTCGTGCTCAGGGCTCTGAGTGTGGG-------GTGGGGGTCCAGGCTGCAGCTTGGGTC-GGGTCTGCTC----TGTGTGCCCCTCACTCTGCTGCACTACAGGCATGTTC-----TTCCTGA-----AG-----CTGACTCCCTGGAACACATTG-CAGGGCCTGTGGATATC-CACCAGTGCCCACGTG------GCCAAAACCCACCTTA-G-----TGGGGTGGAG-AAATATGTCCCTTCCATGGCCATC--AGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 528899 799 - 2125214 GTCAAAT---CTCCCTTCCCAATTGTACCATCAACATCAG-------------TT--------CCATAGCCTCCAAGGGCAGCTCAGC-TCGACCTCTAGGACTGGCCACCCT-CTCCCTGGACTGTGATATTGG-------AGAGAGACCCAGGGCCAAGGCAGCCAAAAGGACAGTACCTGACTAGCCACACAAAGCAAGGGCCTAGCAGGAGAAACAAGCCTCCATCGCTCTAGC-TGCCTCCTTG-----------------------------------------TGCAGCCATAC-ACCCCCAACCCAGCCAACCTGCA----TGTGAGCGTTGCTCATTGGCTCGTTGGCTTGGCAGCTGCACGATCTTGAGGGTTCCCGAGCTGCTAGCCAGGAAGCTGAGGTTGGACTCAGACAGGCAGGAG----------GCCCTGAAGTGAGGCACCA-----------GGcagagaatgctggtctgaggagggaacatctaaactgaggcttggagggtACACCTACCCTCCAAGGTAGGTGTACCTTG--------GGGGCAAGGGAGGGGTGTGCCCCAGCCTCCTACCTGACCTGAACATACCC------ATTTTCATCTTGGCAGGTGCTGACGCAGCGGCACTGCTGGGT----------GGTTCCACAGTCTCTGCCCGCGGTGAGCACAGACGAGCCTCTTGCTCAGGGCTCTCAGTGTGGG-------GTGGGGGTCCAGGCTGCAGCTCGGGTC-GGGTCTGCTC----TGTGTGCCCCTCACTCTGCTGCGCTGCAGGCATGTTC-----TTCCTGA-----AG-----CTGACTCCCTGGAACACATTG-CAGGGCCTGTGGATATC-CACCAGTGCCCATGTG------GGCAAAGCCCACCTTA-G-----TGGGGTGGAG-AAATATGTCCCTTCCATGGCCATC--AGG i cebCap1.NW_016107703v1 I 157 C 0 s otoGar3.GL873611 2261259 739 - 8137123 GCCATTTGCAACACGTTCTCAACTGCACTGTGAA-ATCAGGAGGTTGGACAGATTCCTCAGCATGACAGCCAGAGAAGTCAGATCAGTGTCAAGCTGTGTGACTGGC--ACACTCTTCCTTGTCTGTGAAGCCAGCATCGCTAGCTTCTCTAAGGGCTCAGGTGGCCAGAAAGCCTAAGTCCCACAAGCAGCACAAAGCCAGGGCTAGGCAGGAGAAGCCAGTGGCACCCAGT------------ACTG-----------------------------------------GGAGGCCTTTC-----C--ACGTGTCTGGCCTG----------AGACCTGCTCATTG----TTCAG-TGAGCATCTG-----------------------TGCTAGCT--GCATATGAGGTGACACCC------GCATGTCCCTCACCAATAGTCTGGAGT---CTGCTTTCTGGCATGGGGGTAGGGAATGCTGGTCTGCAGGAGG-ACATTCAGAGCAAGGCTTGAAGGGT--------------GAGTGG------------------GGCATCAGGGAGGAGAGTATCCCTACTTCTTAGCAGGACTAGACAGGC-----------TCCACCTTGGTGGGCTGCCCTGCAGTTATGCAAATG-----------------CAACAGCTT-------TGGTGGTTGAGCATGGGCCTATTGCTCA-------------CAG-------GTGTGTGCCTTCACAGAGGGT-AGGTC-AAGGCT-----------GGGTCCCTCACCCACCGGGAAATTGGCCATGTTC-----TTTCAGAGAAGTGG-----CTGAATCCCTCAAACACACTGCCAGGCCCTGCTGACATCACACC--CACCCACATGTGAGGTATCAAAGCCTGCCTCA-GGGGGATGGGATGGAG-AAATGTACCCTTTCTGTTGACACC--ACA i otoGar3.GL873611 I 20 C 0 s canFam3.chr6 61048459 689 - 77573801 ---------------------ACTGTACTGTCACCAGTGG--------------------------GAACCATGTGGGCCAGGTCTGT-GGGCTCTCTGTGACTGGCCACCCT-------------------TGG---------------------CCCAGCCCGACAGGAG-------------------CACAGAGCCAGGG-TGGGCAGGAGGAG---------GCTGTTCTAGAGTGTCTCCCCT-----------------------------------------TGACTTTCTTC-ATTCA--GTCCTGCTG-TCAGCAGCTGTGCAGGAGCT-CCCCTTGGTGTGGCCACGTGTGAGGCACACA-----GGGCCCTCCTGAGCTCTGAGCT-----------GCTGGA--AAGACAAGCAGACGTTGCAC--GGGCCTGACAAGAAGACC--------------AGTGGAGAC--CTAGCCTGGGCTGGGA--GGCTGCTCTGAGGCTCACAGGCT--------------GAACGG-------TTGAGGGGGCAGGAGTGAGGGGTGGGGGTGCT---GCCTTCT-----AACTAGACATGCACTGGAGAATTTCCTCTCTATTGGCTGTGGATGCGACAATGCTACTGAGCAAATGACCCAAATTAAGCAGCTT-------CAGTGAAAGATCATGGATCCCTTCCTCACAGATCTGTGGGTCAGCACGGGCTTGGGGGTGCAGGCATTTGCTTGAGTCTAGGTCTGCTCTATGTGTATGTGTCTCATTCTTCTGGGTCCATGGTGGCAGCAGAAGCTCAAGA-----AGAGAAACCCAACCCCTTATGCACATTG-CAGGACTGGCTGGCATC------ACACCC-----------ACCAAAACCCCACTGA-G----------------AGACAGGTTCCTTCTGTGGAAGCC--AAG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=80948.000000 s hg38.chr7_KI270899v1_alt 156946 10 + 190869 AGCAGGGCTG s panTro5.chr7_NW_015973580v1_random 31931 10 - 83720 AGCAGGGCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 547005 10 + 162613886 AGCAGGGCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 118542 10 - 432965 AGCAGGGCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179254 10 + 85365473 AGCAGAGCTG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33640661 10 + 192294377 AGCAGAGCTG i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 4407863 10 - 9440265 AGCAGAGCTG i macNem1.NW_012019910v1 I 2 C 0 s cerAty1.NW_012002954v1 16995665 10 - 21915920 AGCAGAGCTG i cerAty1.NW_012002954v1 I 2 C 0 s chlSab2.chr28 131398 10 - 21531802 AGCACAGCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 164598 10 - 2515279 AGCAGAGCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 323224 10 + 6586416 AGCACAGCTG i colAng1.NW_012117710v1 I 2 C 0 s calJac3.chrUn_GL286444 51517 10 + 138751 CCCAGAGCTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 366105 10 - 2409723 CGCAGAGCTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 529698 10 - 2125214 CGCAGAGTTG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2261998 10 - 8137123 GGCAGGGCTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61049148 10 - 77573801 GGCAGGAGTG i canFam3.chr6 C 0 C 0 e rheMac8.chr3 34024709 12 + 185818997 I e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=958589.000000 s hg38.chr7_KI270899v1_alt 156956 142 + 190869 ACCATC-GCAGGGAGGGCTCACATCTG-CCCAGTCTCTGC-CAGCGAGTCTCCTCT---------------------------------------------------CAGATCCCACGTG-GGCACTCCCTCCCC----ACCCCTTCGTCTCTAAGATTAAATCC---------------AGGTG----------CCTTGAG------CCCCAGT---CCCCATGTTCCCCTCAA s panTro5.chr7_NW_015973580v1_random 31941 192 - 83720 ACTATC-GCAGGGAGGGCTCACATCTG-CCCAGTCTCTGC-CAGCGAGTCTCCTCT-CAGTGCAGGCCCTGTCCACGTGCACAGAGACAGGGCGGTGCGCGTGGGCACAGATCCCACGTG-GGCACTCCCTCCCC----ACCCCTTCGTCTCTAAGATTAAATCC---------------AGGTG----------CCTTGAG------CCCCAGT---CCCCATGTTCCCCTCAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 547015 192 + 162613886 ACCATC-GCAGGGAGGGCTCACATCTG-CCCAGTCTCTGC-CAGCGAGTCTCCTCT-CAGTGCAGGCCCTGTCCACGTGCACAGAGCCAGGGCGGTGCTCGTGGGCACAGATCCCACGTG-GGCACTCCCTCCCC----ACCCCTTCGTCTCTAAGATTAAATCC---------------AGGTG----------CCTTGAG------CCCCAGT---CCCCATGTTCCCCTCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 118552 192 - 432965 ACCATC-GCAGGGAGGGCTCACGTCTG-CCCAGTCTCTGC-CAGCGAGTCTCCTCT-CAGTGCAGGCCCTGTCCACGTGCACAGAGCCAGGGTGGTGCTCGTGGGCACAGATCCCACGTG-GGCACTCCCTCCCC----ACCCCTTCGTCTCTAAGATTAAATCC---------------AGGTG----------CCTTGAG------CCCCAGT---CCCCATGTTCCCCTCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179264 191 + 85365473 ACCATC-GCGGGGAGGGCTCACGTCTG-CCCAGTCTCTGC-CAGCGAGTCTCCTCT-CGGTGCAGGCCCTGTCCACGTGCACAGAGCCACAGCAGTGCTCGTGGGCACAGATCCCACGTG-GGCACTCCCTCCCC----ACCCCTTCGTCTGTAAGATTAAATCC---------------AGGTG----------CCTTGAG------CCCCACT---CCCCATGTT-CCCTCAA i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4407873 192 - 9440265 GCCATC-GCGGGCAGGGCTCACGTCTG-CCTGATTTCTGC-CAGGGAGTCTCCTCT-CAGTGCAGGCCCTATCCACGTGCACAGAGCCACGGCAGCACTCAGGGGCACAGACCCTACGTG-GACACTCCCTCCCC----GCCGCTTGGTCTCTAAGATTAAATCC---------------AGGTG----------TCTTGAG------CCCCCCT---CCCCATGTTCCCCTCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16995675 192 - 21915920 GCCATC-GCGGGCAGGGCTCACGTCTG-CCCGATTTCTGC-CAGGGAGTCTCCTCT-CAGTGCAGGCCCTATCCACGTGCACAGAGCCACGGCAGCACTCAGGGGCACAGACCCTACGTG-GACACTCCCTCCCC----GCCGCTTGGTCTCTAAGATTAAATCC---------------AGGTG----------TCTTGAG------CCCCCCT---CCCCAAGTTCCCCTCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 131408 190 - 21531802 GCCATC-GCGGGCAGGGCTCACGTCTG-CCCCATCTCTGC-CAGCGAGTCTCCTCT-CAGTGCAGGCCCTGTCCACGTGCACAGAACCACGGCAGCACTC--GGGCACGGACCCTACGTG-GGCACACCCTCCCC----CACGCTTGGTCGCTAAGATTAAATCC---------------AGGTG----------CCTTGAG------CCCCCCT---CCCCATGTTCCCCTCAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 164608 192 - 2515279 GCCCTC-GCAGGCAGGGCTCACGTCTG-CCCGATTTCTGC-CAGGGAGTCTCCTCT-CAGTGCAGGCCCTATCCACGTGCACAGAGCCACGGCAGCACTCAGGGGCACAGACCCTACGTG-GACACTCCCTCCCC----GCCGCTTGGTCTCTAAGACTAAATCC---------------AGGTG----------TCTTGAG------CCCCTCT---CCCCATGTTCCCCTCAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 323234 192 + 6586416 GCCATC-GTGGGCAGGGCTCACGTCTG-CCCGATCTCTGC-CAGCGAGTCTCCTCT-CAGTGCAGGCCCTGACCACGTGCACAGAGCCACGGCAGTACTCATGGGCACAGACCGTGTGTG-GGCACTCCCTTCTC----CCCACTTGGTCTCTAAGATTAAATCC---------------AGGTG----------CCTTGAG------CCCCCCT---CCCCATGTTCCCCTCAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 51527 167 + 138751 ACCATC-GTGGGAAGGGCTCATGTATG-CCCAGTCTCTGC-CAGCTAGTCTCACCTCCAGTGCCGGCCCTGTCCATGTGCA--------------------------CAGATCCCACACA-GGTACCCCCTCTCC----ACCGCTTTGTCTCTAAGA-TAAATCC---------------AAGAA----------CCTTGAG------Ccccact--cccccacattcccctcca i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 366115 166 - 2409723 ACCGTC-GTGGGCAGGGCTCATGAAGG-CCCAATCTCTGC-CAGCTAGTCTCACCT-CAGTGCAGGCCCTGTCCACGTGCA--------------------------CAGATCCCACATG-GGCACCCCCTCTCC----ACCCCTTTGTCTCTAAGATTAAATCC---------------AGGCA----------CCTTTAG------Ccccact---ccccacattcccctcca i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 529708 166 - 2125214 ACCATC-GTGGGCAGGGTTCACATATG-CACAATCTCTGC-CAGCTAGTCTCACCT-CAGTGCAGGCCCTGTCCACGTGCA--------------------------CAGATCCCACACG-GGCACCCCCTCTCC----ACTCCTTTGTCTCTAAGATTAAATCC---------------AGGCA----------CCTTGAG------CCCCACT---CCCCACATTCCCCTCCA i cebCap1.NW_016107703v1 C 0 I 158 s otoGar3.GL873611 2262008 131 - 8137123 -------------------AATGTTTGCCCCAACCTCTGAGTTGTGGGCCTCAGCC-CAGTGCCTACCGCA-CTGTGTGCACA----------------------------------GTG-GTGAAGCCCTCTGCTTTGGCTCCTTGGTCTCTGAGATGAAATCC---------------AGACA----------CCTTAAA------TCTCA-----CCCCA------------ i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61049158 219 - 77573801 -CTACCTGCAGAACAAGATCAAGTCTG-CC------CTGC-CTGGGCACCTCACCT-CAGTACCTGCTGCAGTCATGTGCCTGGAGCAGCCGGGGTGTTGGTGAACAC--ACCCTGAGTGAGACCTTGCATTCCT----GGATCTCTGCCTCCAGGATTAAGTCCCTCCAGAGCTCCCCAAGGCGAGAAGCAGCCCCCTGAGCATTGCCTCCACTTGCCCCAGTGTCCTGCACGA i canFam3.chr6 C 0 C 0 e macFas5.chr3 33640671 0 + 192294377 C e rheMac8.chr3 34024709 12 + 185818997 I e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=7098.000000 s hg38.chr7_KI270899v1_alt 157098 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 32133 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 547207 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 118744 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179455 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4408065 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16995867 1 - 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 131598 1 - 21531802 A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 164800 1 - 2515279 A i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 323426 1 + 6586416 A i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 51694 1 + 138751 a i calJac3.chrUn_GL286444 C 0 I 65 s saiBol1.JH378296 366281 1 - 2409723 a i saiBol1.JH378296 C 0 I 329 s cebCap1.NW_016107703v1 530032 1 - 2125214 A i cebCap1.NW_016107703v1 I 158 C 0 e otoGar3.GL873611 2262139 0 - 8137123 C e canFam3.chr6 61049377 0 - 77573801 C e macFas5.chr3 33640671 0 + 192294377 C e rheMac8.chr3 34024709 12 + 185818997 I e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=911308.000000 s hg38.chr7_KI270899v1_alt 157099 149 + 190869 CCCCTGTTCCTCCCCACAGAGACACATGGCTCCAGCTCCACACCCGAGCACCTGCTGTTTACGGTTTGTGCTGACCGGATGCTGTTTCTCCTTCCATCTCCACCTGCAAATGTTCTGCTGA-CCCT-CAGGCCGGTTTGAAGACCAGCACA s panTro5.chr7_NW_015973580v1_random 32134 149 - 83720 CCCCTGTTCCTCCCCACAGAGACGCATGGCTCCAGCTCCACACCCGAGCACCGGCTGTTTATGGTTTGTGCTGAGCGGATGCTGTTTCTCCTTCCATCTCCACCTGCGAATGTTCTGCTGA-CCCT-CAGGCCGGTTTGAAGACCAGCACA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 547208 149 + 162613886 CCCCTGTTCCTCCCCACAGAGACGCATGGCTCCAGCTCCACACCCGAGCACCGGCTGTTTATGGTTTGTGCTGAGCGGATGCTGTTTCTCCTTCCATCTCCACCTGCGAATGTTCTGCTGA-CCCT-CAGGCCGGTTTGAAGACCAGCACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 118745 148 - 432965 CCCCTGTTCCTCCCCACAGAGACAGGTGGCTACAGCTCCACACCCAAGCACCTGCTGTTTACGGTTGGTGCTGACCGGATGCTGTTTCTCCTTCCATCTCCACCTGCGAATGCTCTGCTGA-CCCT-CAGGCCGGTTTG-AGACCAGCACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179456 148 + 85365473 CCCCTGTTCC-CCCCACAGAGACATGTGGCTCCAACTCCACACCCGTGCACCTGCTGTTTACAGTTTGTGCTGACCAGATGCTGTTTCTCCTTCCATCTCCACCTGCGAATGTTCTGCTGA-CCCT-CAGGCCTGTTTGAAGACCAGCGCA i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4408066 148 - 9440265 CCCGTATTCCCCCCCACAGAGACCTGTGGCTCCAACTCCACG-CCGTGCACCTGCTGTTTACGGTGTGTGCTGACTGGATGCTGTCTCTCCTTCCCTCTCCACCTGCCAATGTTCTGCGGA-CCCT-CAGGCCCGTTTGAAGACCAGCACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16995868 148 - 21915920 CCCCTATTCCCCCCCACAGAGACCTGTGGCTCCAACTCCACG-CTGTGCACCTGCTGTTTACGGTGTGTGCTGACTGGATGCTGTCTCTCCTTCCTTCTCCACCTGCCAATGTTCTGCCAA-CCCT-CAGGCCCATTTGAAGACCAGCACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 131599 148 - 21531802 CCCCTATTCCTCCCCACAGAGACCTGTGGCTCCAACTCCACG-CCGTGCACCTGCTGTTTATGGTGTGTGCTGACTGGATCCTGTCTCTCCTTCCCTCTCCACCTGCCAATGTTCTGCCGA-CCCT-CAGGCCCGTTTGAAGACCAGCACG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 164801 148 - 2515279 CCCCTATTCCCCCCTACAGAGACCTGTGGCTCCAACTCCACG-CCGTGCACCTGCTCTTTACGGTGTGTGCTGACTGGATGCTGTCTCTCCTTCCCTCTCCACCTGCCAATGTTCTGCCGA-CCCT-CAGGCCCATTTGAAGACCAGCACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 323427 148 + 6586416 CCCCTATTCCTCCCCACAGAGACATGGGGCTCCAACTCCACA-CCATGCACCTGCTGTTTACGGTGTGTGCTGACTGGATGCTGTTTCTCCTTCCCTCTCCACCTGCCAATGTTCTGTTGA-CCCT-CAGGCCCGTTTGAAGACCAGCACA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 51760 149 + 138751 cccctgctcctccccACCCAGACATGTGGCTCCAGCTCTACACTCGTGTACCTGCTGTTTATGGTTTGTGCTAACTGGATGCCATTTCTCCTTCCATCTCCACCTGCCAATGTTCTCTTGA-CCCT-CAGGTCCATGTAGAGACCGGCAAA i calJac3.chrUn_GL286444 I 65 C 0 s saiBol1.JH378296 366611 148 - 2409723 cccctgctcctccccACCCAGACATGTGGCTCCAGCTCCACCCTCGTGCACCTGCTGTTTACGGTTTGTGCTGACTGGATGCCATTTCTCCTTCCATCTCCACCTGCCAATGTTCTCTTGA-CCCT-CAGGCCC-TCTAGAGACTGGCACA i saiBol1.JH378296 I 329 C 0 s cebCap1.NW_016107703v1 530033 149 - 2125214 CCCCTGCTCCTCCCCACCCAGACATGTGGCTCCAGCTCCACACTCGTGCACCTGCTGTTTACAGTTTGTGCTGACTGGATGCCATTTCTCCTTCCATCTCCACCTGCCAATGTTCTCTTGA-CCCT-CAGGCCCATTTAGAGACTGGCACA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2262139 91 - 8137123 -------------------------------------------------GCATGCAGTTC-TAGTCTCTGTTGACCAGACACCATTTCTCCTTCCATCTCCACCTG-AAATGTTCTGCTGATCCCT-CAGTGTGTCTGGGAGA-------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61049377 141 - 77573801 --CCTGTTCC-ATCAACCCGAATATGCAATCCCAGCTTGACACGTCTGCAC-GGTGGTGTGCAGTTTGTGCCAAC--GGAGCCGCTGCGCCTTCCATTGCCACCTGGAAATGTTCTAGTAA-CCCTCCAGGCTGGTT---AAATCAGCAAA i canFam3.chr6 C 0 C 0 e macFas5.chr3 33640671 0 + 192294377 C e rheMac8.chr3 34024709 12 + 185818997 I e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=305986.000000 s hg38.chr7_KI270899v1_alt 157248 35 + 190869 GCCCATGTGAGCAGGGCACAGGGCCCCATCCTGAG s panTro5.chr7_NW_015973580v1_random 32283 35 - 83720 GCCCATGTGAGCAGGGCACAGGGCCCCATCCTGAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 547357 35 + 162613886 GCCCATGTGAGCAGGGCACAGGGCCCCATCCTGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 118893 35 - 432965 GCCCATGTGAGCGGGGTACAGGGCCCCATCCTGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179604 35 + 85365473 GCCCGTGTGAGCAGGGCACAGGGCCCCATCCTGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34024721 35 + 185818997 GCCCATGCGGGCAGGGCACGGGGCCCCCTCCTGAG i rheMac8.chr3 I 12 C 0 s macFas5.chr3 33640671 35 + 192294377 GCCCATGCGGGCAGGGCACGGGGCCCCCTCCTGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4408214 35 - 9440265 GCCCATGCGGGCAGGGCACGGGGCCCCCTCCTGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16996016 35 - 21915920 GCCCATGCGGGCAGGGCACGGGGCCCCCTCCTGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 131747 35 - 21531802 GCCCACGCGGGCAGGGCACGGGGCCCCCTCCTGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 164949 35 - 2515279 GCCCATGTGGGCAGGGCACGGGGCCCCCTCCTGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 323575 35 + 6586416 GCCCACGTGGGCAGGGCACGGGGCCCCCTCCTGAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 51909 35 + 138751 GCACATGTGGACAGGGCACAGGGTTCCACCCTAAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 366759 35 - 2409723 GCACATGTGGGCAGGGCACAGGGTTCCATCCTAAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 530182 35 - 2125214 GCACATGTGGTCAGGGCACAGGGTTCCATCCTAAG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2262230 19 - 8137123 --------GGGCAGGGC--------CCATGCTGAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61049518 28 - 77573801 ----GTGTTTTTGGAG---AGGGCCTCATCCTGAG i canFam3.chr6 C 0 I 1007 e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=141245.000000 s hg38.chr7_KI270899v1_alt 157283 16 + 190869 TGGCTGGCCTGTCCGG- s panTro5.chr7_NW_015973580v1_random 32318 16 - 83720 TGGCTGGCCTGTCCGG- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 547392 16 + 162613886 TGGCTGGCCTGTCCGG- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 118928 16 - 432965 TGGCTGGCCTGTCCGG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179639 16 + 85365473 TGACTGGCCTGTCCAG- i nomLeu3.chr20 C 0 I 18 s rheMac8.chr3 34024756 16 + 185818997 TGGTTGGCCTGTCCGG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33640706 16 + 192294377 TGGTTGGCCTGTCCGG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4408249 16 - 9440265 TGGTTGGCCTGTCCGG- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16996051 16 - 21915920 TGGTTGGCCTGTCCGG- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 131782 16 - 21531802 TGGCTGGCCTGTCCGG- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 164984 16 - 2515279 TGGTTGGCCTGTCCGG- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 323610 16 + 6586416 TGTCTGGCCTGTCTGG- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 51944 16 + 138751 TGGCTGGCCTGTCCAG- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 366794 16 - 2409723 TGGCTGGCCTGTCCAG- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 530217 16 - 2125214 TGGCTGGCCTGTCCAG- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2262249 17 - 8137123 CTGCCGTCCTGTGTATT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61049546 1007 - 77573801 I e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=19802.000000 s hg38.chr7_KI270899v1_alt 157299 3 + 190869 GGG s panTro5.chr7_NW_015973580v1_random 32334 3 - 83720 GGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 547408 3 + 162613886 GGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 118944 3 - 432965 GGA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34024772 3 + 185818997 GAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33640722 3 + 192294377 GAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4408265 3 - 9440265 GAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16996067 3 - 21915920 GAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 131798 3 - 21531802 GAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 165000 3 - 2515279 GAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 323626 3 + 6586416 GAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 51960 3 + 138751 GAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 366810 3 - 2409723 GAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 530233 3 - 2125214 GAG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2262266 3 - 8137123 GGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61049546 1007 - 77573801 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 179655 18 + 85365473 I a score=2872100.000000 s hg38.chr7_KI270899v1_alt 157302 383 + 190869 AGGAAGTT-----------CCACCCCACACCCA--CCCCACCACCACAGGATGTGCCCAGAAGGCGGAGGGACTGGCCACTGTGGGGGCTCCCATGTCCAGGCC-GGGCCTCCTCAGCATAAAATCAGCT-GACAGCAGCCTCAACGCGCCACTGCCTGAGAGGACACCGCCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CACGC-----CCTGGGGAGGGAACAGGTGGAGGTGGGTGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAATGAAAAGATAGCATCACTGAATTAAAGACGTCATTTA--TTATGGAGCTGAGATTTGGTTTGCCCAGCAGCTTAAAACAATGTCACTCACAGCCTTGTGG-----CA-CCTTGGGACGGGCAGGTG---- s panTro5.chr7_NW_015973580v1_random 32337 394 - 83720 AGGAAGTTccaccccacacccaccccacaccca--ccccaccaccacAGGACGTGCCCAGAAGGCGGAGGGACTGGCCACTGTGGGGGCTCCCGTGTCCAGGCC-GGGCCTCCTCAACATAAAATCAGCT-GACAGCAGCCTCAATGTGCCACTGCCTCAGAGGACACCGCCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CACGC-----CCTGGGGAGGGAACAGGCGGAGGTGGGTGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAATGAAAAGATAGCATCACTGAATTAAAGACGCCATTTA--TTATGGAGCTGAGATTTGGTTTGCCCAGCAGCTTAAAACAATGTCACTCACAGCCTTGTGG-----CA-CCTTGGGACGGGCAGGTG---- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 547411 394 + 162613886 AGGAAGTTccaccccacacccaccccacaccca--ccccaccaccacAGGACGTGCCCAGAAGGCGGAGGGACTGGCCACTGTGGGGGCTCCCGTGTCCAGGCC-GGGCCTCCTCAACATAAAATCAGCT-GACAGCAGCCTCAATGTGCCACTGCCTCAGAGGACACCGCCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CACGC-----CCTGGGGAGGGAACAGGCGGAGGTGGGTGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAATGAAAAGATAGCATCACTGAATTAAAGACGTCATTTA--TTATGGAGCTGAGATTTGGTTTGCCCAGCAGCTTAAAACAATGTCACTCACAGCCTTGTGG-----CA-CCTTGGGACGGGCAGGTG---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 118947 394 - 432965 AGGAAGTTccaccccacacccaccgcacaccca--ccccaccaccacAGGACGTGCCCAGAAGGCGGAGGGACTGGCCACTGTGGGGGCTCCCGTGTCCAGGCC-GGGCCTCCTCAGCATAAAATCAGCT-GACAGCAGCCTCAACGCACCACTGCCTCAGAGGACACCACCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CACGC-----CCTGGGGAGGGAACAGGCGGAGGTGGGTGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAATGAAAAGATAGCATCACTGAATTAAAGACATCATTTA--TTATGGAGCTGAGATTTGGTTTGCCCAGCAGCTTAAAACAATGTCACTCACAGCCTTGTGG-----CA-CCATGGGACGGGCAGGTa---- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34024775 370 + 185818997 AGGAAGCT-----------CCACCCCACACCCA--CCCC-CCACCACAGGACGTGCCCAGAAGGCGGGGGGACTGGCCACTGTGGGGGCTCCCGTGTCCAGGCC-GGGACTCCTCAGCATAACGTCCGCT-GACGGCAGCCTCAGCGCGCCACTGCCTCGGAGGACATGTCCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CCCGC-----CCTGGGGAGGGAACA----------GGCGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAACGAAAAGATAGCATCACTGAATTAAATACGTTGTTTA--TTATGGAGCTGGGATTTGGTTTGTCTGGCAGTTTAAAACGATGTCACTCACAGCC-TGTGG-----CA-CCGTGGGA-GGGGAGGTA---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33640725 370 + 192294377 AGGAAGCT-----------CCACCCCACACCCA--CCCC-CCACCACAGGACGTGCCCAGAAGGCGGGGGGACTGGCCACTGTGGGGGCTCCCGTGTCCAGGCC-GGGACTCCTCAGCATAACGTCCGCT-GACGGCAGCCTCAGCGCGCCACTGCCTCGGAGGACATGTCCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CCCGC-----CCTGGGGAGGGAACA----------GGCGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAACGAAAAGATAGCATCACTGAATTAAATACGTTGTTTA--TTATGGAGCTGGGATTTGGTTTGTCTGGCAGTTTAAAATGATGTCACTCACAGCC-TGTGG-----CA-CCGTGGGA-GGGGAGGTA---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4408268 370 - 9440265 AGGAAGCT-----------CCACCCCACACCCA--CCCC-CCACCACAGGACGTGCCCAGAAGGCGGGGGGACTGGCCACTGTGGGGGCTCCCGTGTCCAGGCC-GGGACTCCTCAGCATAACGTCCGCT-GACGGCAGCCTCAGCGCGCCACTGCCTCGGAGGACACGTCCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CCCGC-----CCTGGGGAGGGAACA----------GGCGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAACGAAAAGATAGCATCACTGAATTAAATACGTTGTTTA--TTATGGAGCTGGGATTTGGTTTGTCTGGCAGTTTAAAACGATGTCACTCACAGCC-TGTGG-----CA-CCGTGGGA-GGGGAGGTA---- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16996070 370 - 21915920 AGGAAGCT-----------CCACCCCACACCCA--CCCC-CCACCACAGGACATGCCCAGAAGGCGGGGGGACTGGCCACTGTGGGGGCTCCCGTGTCCAGGCC-GGGACTCCTCAGCATAACGTCCGCT-GACGGCAGCCTCAGCGCGCCACTGCCTCGGAGGACACGTCCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CCCGC-----CCTGGGGAGGGAACA----------GGCGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAACGAAAAGATAGCATCACTGAATTAAATTCGTTGTTTA--TTATGGAGCTGGGATTTGGTTTGTCTGGCAGTTTAAAACGATGTCACTCACAGCC-TGTGG-----CA-CCGTGGGA-GGGGAGGTA---- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 131801 372 - 21531802 AGGACGCT-----------CCACCCCACACCCA--CCCC-CCACCACGGGACGTGCCCAGAAGGCGGGGGGACTGGCCACTGTGGGGGCTCCCGTGTCCAGGCC-GGGGCTCCTCAGCATAACGTCCGCT-GACGGCAGCCTCAGGGCGCCACTGCCTCGGAGGACACGGCCT---CTGCAAACCTGGGAAGAAGGGCAGC-----CTCGC-----CCTGGGGAGGGAGCA----------GGTGGAGGCGGG-CGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAATGAAAAGAGAACATCACTGAATTAAACACGTCGTTTA--TTATGGAGCTGGGATTTGGTTTGTCTGGCAGTTTAAAACAATGTCACTCACAGCC-TGTGG-----CA-CCGTGAGACGGGGAGGTG---- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 165003 370 - 2515279 AGGAAGCT-----------CCACCCCACACCCA--CCCC-CCACCACAGGACGTGCCCAGAAGGCGGGGGGACTGGCCACTGTGGGGGCTCCCGTGTCCAGGCC-GGGACTCCTCAGCATAACGTCCGCT-GACGGCAGCCTCAGCGTGCCACTGCCTCGGAGGACACGTTCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CCCGC-----CCTGGGGAGGGAACA----------GGCGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAACGAAAAGATAGCATCACTGAATTAAATACGTTGTTTA--TTATGGAGCTGGGATTTGGTTTGTCTGGCAGTTTAAAACGATGTCACTCACAGCC-TGTGG-----CA-CCGTGGGA-GGGGAGGTA---- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 323629 383 + 6586416 AGGAAGTT-----------ccaccccacacccacccccc-ccgccacaGAACGTGCCCAGAAGGCGGGGGGACTGGCCACTATGGGGGCTCCCGTGTCCAGGCC-GGGACTCCTCAGCATAACGTCCACT-GACAGCAGCCCCAGCACGCCACTGCCTCGGAGGACACGGCCT---CTCCAAACCTGGGAAGAA-GGTAGC-----CTCGC-----CCTGGGGAGGGAACAGGCGGAGGCGGGCGCCAGGACC-AGCTAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAATGAAAAGATAGCATCACTGAATTAAATATGTCATTTA--TTATGGAGCTGGGATTTGGTTTGTCTGGCAGTTGAAAACGATGTCACTCACAGCC-TGTGG-----CA-CCGTGGGACGGGGAGGTA---- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 51963 372 + 138751 AGGAAATT-----------CCACCCCACACCCA--TCCCACCACCACAGGAGGTGCCCAGAAGGCAGTGGGACTGGCCACTGTGGGGGTTCCTGTGTCCAGGCT-GGGGCTTCTCAGCATAAACCCACCT-GATGGCAGCCTCAAAGCAACACTGCCTCCGAGGACACAGCGT---CTCCAAACCTGGGAAGAA-GGCAGC-----CACAC-----CCTGTGCTCGTG-------------GGTGCCAGGACT-AGCCAGG-ACTTCCTCCAAAATATTTAGAAGCTTGATTGTAATGAAAAGATAGCATCACTCAATTAAATATGTCATTTAATTTATGGAGCTGAGATTTGGTTTGCCCAGCAGTTTAAAATGATGCCACTCACAGCCTTGTGG-----CA-CTGTGGGATGGAAAGGTA---- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 366813 372 - 2409723 AGGAAATT-----------CCGCCCCACACCCA--CCCCACCACCACAGGAGGTGCCCAGAAGGCAGGGGGACTGGCCGCTGTGGGGGTTCCTTTGTCCAGGCT-GGGGCTCCTCAGCATAAAACCACCT-GATAGCAGCCTCAAAGCACCACTGCCTCCGAGGACACAGCCT---CTCCAAACCTGGGAAGAT-GGCAGC-----CACAC-----CCTGTGTTGGTG-------------GATGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAATAAAAAGAGAGCATCACTGAATTAAATATGTCATTTAATTTATGGAGCTGAGATTTGGTTTGCCCAACAGTTTAAAATGATGCCACTCACAGCCTTGTGG-----CA-CTGTGGGATGGGAAGGTA---- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 530236 369 - 2125214 AGGAAATT-----------CCACCCCACATCCA--CCCCACCACCACAGGAGGTGCCCAGAAAGCAGCGGGACTGGCCACTGTGAGGGCTCCTGTGTCCAGGCT-GGGGCTCCTCAGCATAAAACCACCT-GATGGCAGCCTCAAAGCACCACTGCCTCCGAGGACACAGCCT---CTCCAAACCTGGGAAGAA-GGCAGC-----CGCGC-----CCTGTGTTGGTG-------------AGTGCCAGGACT-AGCCAGG-ACTTCCTCCCAAATATTTAGAAACTTGATTGCAATG-AAAGAGAGCATCACTTAATTAAATATGTCATTTAATTTATGGAGCTGAGATTTGGTTTGCCCAGCAGTTTAAAACGATTCCACT--CAGCCTTGTGG-----CA-CTCTGGGATGGGAAGGTA---- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2262269 370 - 8137123 AGAGAGCT-----------CTGTCCCATTCTAA---------------GGAGGTACCCAGAAGTCAGTGCAACTGGCTGTTGCAGGGCTTCCAGGGCCAGGCCT-GGGGCTCCTCAGCATAAGATCAGCTGGAGAGTATCCCCAAAGTGCCCCTGCGCCAGAGG----TACGT---CTCAAGTCACTGGGAAAA-AGCATCTTATGCAGGC-----CCTGGCAAGGGAATAGGCCTCCAGCAGTGCCAGGAATCAGTAAGG-GCTTTCTC----------AGCAACTTGATTGTAAAAAAGAGACAAAACCACTGAATTAAAGATGTAATTTAATTTACAGAGCTGAGATTAGATTTGCCTAGGAGTTTAAAATGATGCCACCTACTGCC-TGTGGGCCTCCATCCATGGGATGGGTGGGTG---- i otoGar3.GL873611 C 0 I 1253 s canFam3.chr6 61050553 389 - 77573801 AGGAAGTT------------CAACTCATCCCCA--ACCCGTTACTTACAGAAGTGCCCAGAGACTGCTGGGACAGGTCACCATCTGG-CCCCCGTGGTCAGGCCTGGGGCTTCTCAAAGCCGTATCAGCT-GA-AGTAATCTCAAAGCATTCCTGCATCTGAGAACGAAGACGTTACCCCGTACCTGGGAAGAA-GGGAGT-----CTGATGCATGCCTGGTGATGGAGCA--TGGTGGTGGGTATCAGGAAC-AAATAGACACTTCAGCACAAAGTTTTGGAATCTAGATTGCAAAGAAAAGGCAAAATCACAGGATTAAATATG-----TA--CAAGGAAGCTGAGGTTAGAGTTGCCCATCAGTTGAACGTGGCCTCACTCACTCTCCTGTAGGC---CA-CCACGGCCACAGCAGGCAGTTG i canFam3.chr6 I 1007 I 763 e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 179655 18 + 85365473 I a score=3287608.000000 s hg38.chr7_KI270899v1_alt 157685 523 + 190869 cctacacaattatttacttaagaacataccttccttt------------aaaataaccaatgttgtacttagataaatgtatttacatggg--agactttctgtcacAGATTTGATGTCTC-GTGAT-CATTTCTCTTAGTATACATTAAAAGTTA------ATTATTGTCAGAAAAAGTTATCTGAAACCTGGAACTAAGTCCCTAAAGTGGGCAGGGCT-GGGGGGAAGGTTCCCGAGACCTGGGCTGGTTCCCAAGACCTGGGCTGCGGGG-GACTTAGTTCACCTCCCAGTTTGCTGT---TCAAAGGTTCCAGACTCAGAGACGTGTCCCATTATCT---GGATTTTAGCCGAAGGCAGATGCAGTgatctctgtccagggagacagataat-ccacagatttcaggccggctggacattaaccagtccataacccagaggtcttatctcagcctttcttgtcaaattgcctgtaaaca-cctcttctgtgaagtgtgctcagcagccagtcacagcgtctgccataacatcgcccctcatttgttaatg s panTro5.chr7_NW_015973580v1_random 32731 502 - 83720 Tctacacaattatttacttaagaacataccttccttt------------aaaataaccaatgttgtacttagataaatgtatttacatggg--agactttctgtcacAGATTTGATGTTTC-GTGAT-CATTTCTCTTAGTATACGTTAAAAGTTA------ATTATTGTCAGAAAAAGTTATCTGAAACCTGGAACTAAGTCCCTAAAGGGGGCAGGGCT-GGGGGGAAGGTTCCCG-------------------AGACCTGGGCTGTGGGG-GACTTAGTTCACCTCCCAGTTTGCTGT---TCAAAGGTTCCAGACTCAGAGACGTGCCCCATTATCT---GGATTTTAGCCGAAGGCAGATGCAGTGAtctc--tccagggagacagataat-ccacagatttcaggccggctggacattaaccggtccataacccagaggtcttatctcagcctttcttgtcaaattgcctgtaaaca-cgtctcttgtgaagtgtgctcagcagccagtcacagcgtctgccataacatcgcccctcatttgttaatg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 547805 502 + 162613886 Tctacacaattatttacttaagaacataccttccttt------------aaaataaccaatgttgtacttagataaatgtatttacatggg--agactttctgtcacAGATTTGATGTTTC-GTGAT-CATTTCTCTTAGTATACGTTAAAAGTTA------ATTATTGTCAGAAAAAGTTATCTGAAACCTGGAACTAAGTCCCTAAAGGGGGCAGGGCT-GGGGGGAAGGTTCCTG-------------------AGACCTGGGCTGCGGGG-GACTTAGTTCACCTCCCAGTTTGCTGT---TCAAAGGTTCCAGACTCAGAGACGTGCCCCATTATCC---GGATTTTAGCCGAAGGCAGATGCAGTGAtctc--tccagggagacagataat-ccacagatttcaggccggctggacattaaccggtccataacccagaggtcttatctcagcctttcttgtcaaattgcctgtaaaca-cctcttttgtgaagtgtgctcagcagccagtcacagcgtctgccataacatcgcccctcatttgttaatg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 119341 507 - 432965 tctacacaattatttacttaagaacataccttccttt------------aaaataaccaatgttgtacttagataaatgtatttacatggg--agactttctgtcacAGATTTGATGTTTC-GTGAT-CATTTCTCTTAGTATACATTAAAAGTTA------ATTATTGTCAGAAAAAGTTATCTGAAACCTGGAACTAAGTCCCTAAAGTGGGCAGGGCT-TGGGGGAAGGTTCCCG-------------------AGACCTGGGCTGCGGGG-GACTTAGTTCACATCCCAGTTTGCTGTTGATCAAAGGTTCCAGACTCAGAGACGTGCCCCATTATCC---GGATTTTAGCCGAAGGCAGATGCAGTgatctctgtccagggagacagataat-ccacagatttaaggccggctggacattaaccagtccataacccagaggtcttatctcagcctttcttgtcaaactgcctgtaaaca-cgtctcttgtgaagtgtgctcagcagccagtcacagcgtctgccagaacatcgcccctcatttgttaatg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025145 483 + 185818997 TCTACGCCA-TGTTTCCTTAAGAACATACCTTCCTTT------------AAAATAACCAACGTTTCACTTAGATAAACGTATTTACACGGG--AGACTTTCTGCCACAGATTCGATGTTTC-ATAAT-CATTTCTCTTCGTATACATTGAAAGTTA------ATCATTGTCAGAAAAAGTTATCTGAAACCTGGAATGAAGCCCCTAAAATGGGCAGGGTT-GGGGGGCA-GTTCCCG-------------------AGGCCTGTGCTGGGGGG-GACTTAGT----------------------TCAAAGGTTCCAGACTCAGAGACGTCCCCCGTTTTCT---GGATTTTAACCCAACGCAGACGCAGTgatctctgtccagagagacagataat-ccgcagaatgaaggccggtcggacattaaccagccggtaacccagaggtctggtcttggcctttcttgtcagactgcctgtctgca-cctcgctcgtgaagtgcgctcagcagccagtcacagcatctgccatcacgtcgcccctcatttgtcaatg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641095 483 + 192294377 TCTACGCCA-TGTTTCCTTAAGAACATACCTTCCTTT------------AAAATAACCAACGTTTCGCTTAGATAAACGTATTTACACGGG--AGACTTTCTGCCACAGATTCGATGTTTC-ATAAT-CATTTCTCTTCGTATACATTGAAAGTTA------ATCATTGTCAGAAAAAGTTATCTGAAACCTGGAATGAAGCCCCTAAAATGGGCAGGGTT-GGGGGGCA-GTTCCCG-------------------AGGCCTGTGCTGGGGGG-GACTTAGT----------------------TCAAAGGTTCCAGACTCAGAGACGTCCCCCGTTTTCT---GGATTTTAACCCAACGCAGACGCAGTgatctctgtccagagagacagataat-ccgcagaatgaaggccggtcggacattaaccagccggtaacccagaggtctggtcttggcctttcttgtcagactgcctgtctgca-cctcgctcgtgaagtgcgctcagcagccagtcacagcatctgccatcacgtcgcccctcatttgtcaatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4408638 483 - 9440265 TCTACGCCA-TGTTTCCTTAAGAACATACCTTTCTTT------------AAAATAACCAACGTCTCACTTAGATAAACGTATTTACACGGG--AGACTTTCTGCCACAGATTCGATGTTTC-ATAAT-CATTTCTCTTCGTATACATTGAAAGTTA------ATCATTGTCAGAAAAAGCTATCTGAAACCTGGAATGAAGCCCCTAAAATGGGCAGGGTT-GGGGGGCA-GTTCCCG-------------------AGGCCTGTGCTGGGGGG-GACTTAGT----------------------TCAAAGGTTCCAGACTCAGAGACGTCCCCCGTTATCT---GGATTTTAACCCAACGCAGACGCAGTgatctctgtccagggagacagataat-ccgcagaatgaaggccggtcggacattaaccagccggtaacccagaggtctggtcttggcctttcttgtcagactgcctgtctgca-cctcgctcgtgaagtgcgctcagcagccagtcacagcatctgccatcacgtcgcccctcatttgtcaatg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16996440 483 - 21915920 TCTACGCTA-TGTTTCCTTAAGAACATACCTTCCTTT------------AAAATAACCAACGTTTCACTTAGATAAACGTATTTACACGGG--AGACTTTCTGCCACAGATTCGATGTTTC-GTAAT-CATTTCTCTTCGTATACATTGAAAGTTA------ATCATTGTCAGAAAAAGTTATCTGAAACCTGGAACGAAGCCCCTAAAATGGGCAGGGTT-AGGGGGCA-GTTCCCG-------------------AGGCCTGTGCTGGGGGG-GACTTAGT----------------------TCAAAGGTTCCAGACTCAGAGACATCCCCCGTTATCT---GGATTTTAGCCCAACGCAGACACAGTgatctctgtccagggagacagataat-ccgcagaatgaaggccggtcggacattaaccagccggtaacccagaggtctggtctcggcctttcttgtcagactgcctgtctgca-cctcgctcgtgaagtgcgctcggcagccagtcacagcatctgccatcacgtcgcccctcatttgtcaatg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132173 482 - 21531802 TCTACGCCA-TGCGTCCTTAAGAACATACCTTCCTTT------------AAAATAACCAGCGTTTTACGTAGATAAACGTATTTACACGGG--AGACTTTCTGCCACAGATTCGATGTTTC-GTAAT-CATTTCTCTTCGTATACATTGAAAGTTA------ATTCTTGTCAGAAAAAGTTATCTGAAACCTGGAACGAAGCCCCTAAAACGGGCAGGGTT--GGGGGCA-GTTCCCG-------------------AGGCCTGTGCTGGGGGG-GACTTAGT----------------------TCAAAGGTTCCAGACTCAGAGACGTCCCCCGTTATCT---GGATTTTAGCCCAAGGCAGACGCAGTGATCTCTGGCCAGGGAGACAGACACC-CCGCAGACTGAAGGCCGGTCGGACGTTAACCAGCCGGGAACCCAGAGGTCTGGTCTCGGCCTttcttgtcagactgcccgtcagca-cctcgctcgtgaagtgcgctcggcagccagtcacagcatctgccatcacgtcgcccctcatttgtcaatg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 165373 483 - 2515279 TCTACGCCA-TGTTTCCTTAAGAACATACCTTCCTTT------------AAAATAACCAACGTTTCACTTAGATAAACGTATTTACACGGG--AGACTTTCTGCCACAGATTCAATGTTTC-GTAAT-CATTTCTCTTCGTATACATTGAAAGTTA------ATCATTGTCAGAAAAAGTTATCTGAAACCTGGAATGAAGCCCCTAAAATGGGCAGGGTT-GGGGGGCA-GTTCCCG-------------------AGGCCTGTGCTGGGGGG-GACTTAGT----------------------TCAAAGGTTCCAGACTCAGAGACATCCCCCGTTATCT---GGATTTTAGCCCAACGCAGACGCAGTGATCTCTGTCCAGGGAGACAGATAAT-CCGCAGAACGAAGGCCAGTCCGACATTAACCAGCCGGTAACCCAGAGGTCTGGTCTCAGCCTTTCTTGTCAGACTGCCTGTCTGCA-CCTCGCTCGTGAAGTGCGCTCGGCAGCCAGTCACAGCATCTGCCATCACGTCGCCCCTCATTTGTCAATG i manLeu1.NW_012101810v1 C 0 I 699 s colAng1.NW_012117710v1 324012 484 + 6586416 TCTACGCCA-TGTTTCCTTAAGAACATACCTTCCCTT------------AAAATAACCAATATTTTACTTAGATAAACGTATTTACACGGG--AGACTTTCTGCCACAGATTCGATGTTTC-GTAAT-CATTTCTCTTCGTATACATTGAAAGTTA------ATTATTGTCAGAAACAGTTGTTTGAAACCTGGAACGAAGCCCCTAAAATGGGCAGGGTTGGGGGGGCA-GTTCCCG-------------------AGACCTATGCTGGGGGG-GACTTAGT----------------------TCAAAGGTTCCAGACTCAGAGACGTCCCCCGTTACCT---GGATTTTAGCCCAGGGCAGACGCAGTgatctctgtccagggagacagataat-ccgcagattgaaggccggtcggacattaaccagcccataactcagaggtcttgtctccgcctttcttgtcagactgcgtgttagca-ccttgcttgtgaagtgcgctcggcagccagtcacagcctctgccatcacgtcgcccctcgtttgtcaatg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 52335 514 + 138751 TCTACACAATTATTTACTTAAGAACATACCTTCCGATGTTCTTAAGTAAAAAATAACCGATGTTTTACATAGATAAATGTATTTACATAGG--AGACTTTCTGTCACAGATTTGATGTTTC-GCAAT-CATTTCTCTTAGTATACATTAGAAGTTAATAGTGATTGTTATCAGAAACAGTTATCTGAAACCTGGAACTAAGCTCCCAAAATGGCCAGTGTT-GGGGGAAAGATTCCCT-------------------AGACCTGTGCTGGGGA--GACTTAGTTCATCTCACAGTTTGTCGTTGATCAAATGCTCCAGATTCAGGGACATCCCCTGTTATCT---GAATTTTAGCCCAAGGGAGATGCAGTGATCTCTGTCCAGGGA------------CACAGATTTAAAGCTGgtcggacattaaccagtccataacccagaggtcttatttcagcttttctttccaaattgcctgtaaataccctcgcctgtgaagtgtgctccacatccagtcaccacgcctatcgaaacatcgtccctcacttgttaatg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 367185 470 - 2409723 TCTACAA------TTACTTAAGAACATACCTTCCTGT------------AAAATAACCGACGTTTTACATAGATAAATGTATTTACATGGA--AGACTTTCTGTCACAGATTTGATGTTTC-ACAAT-TATGTCTCTTAGTATACATTAAAAGTTAATAGTAATTGTTATCA-------------GAAACCGGGAACTGACCTCTCAACATGGGCAGTGTT-GGGGGGAAGTTTCCCT-------------------AGACCCGTGCTGGGGAG-GACTTAGTTCACCTCCCAGTTTGCTGTTGATCAAATGTTCCTGATTCAGGGACATCCCCTGTTACCT---GAATTTTAGCCCAAGGGAGATGTAGTGATCTCTGTCCAGGGA------------CACAGATTTAAAGccagttggacattaaccagttcataacccagaggtcttatttcagcctttctttccaaattgcctgtaaataccctcacctgtgaagt--------------gtcaccacgcctgtcgaaacatcgtccctcatttgttaatg i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 530605 501 - 2125214 TCTACACAATTA-TTGCTTAAGAACATACCTTCCTGT------------AAAATAGCCAACATTTTACATAGGTAAATGTATTTACATGGG--AGACTTTCTGTCACAGATTTGAAGTTTC-ATAAT-CATTTCTCTTAGTATACATTAAAAGTTAATAGTAATTGTTATCAGAAACAGTTATCTGAAACCTGGAACTAAGCTCCCAAAATGGGCAGTGTT-GGGGGAAACGTCCCCT-------------------AGACCTGTGCTGGGGA--GACTTTGTTCACCTCCCAGTTTGCCGTTGATCAAATGTTACAGATTCTGGGACGTCCCCTGTTATCT---GAATTTTAGCCCAAGGGAGATGCAGTGATCTCTGTCCAGGGA------------CACAGATTTAAAGCTGgttggacattaaccagtccataacccagaggtcttatttcagcctttctttccaaattgcctataaatacccttgcctgtgaagtgtgctcagcatccagtcaccacgcctgtcgaaacatcgtccctcatttgttaata i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2263892 459 - 8137123 TCTACATAACTATTTACTTAACAAAATA---TTCTTT------------AAAGTAATTGATATTTTACTTGATAAAACATAGTTACACAGGAAAAACATGCAGTCACAAACTTGATGTTTTAGTGATACATTTCTCTTAGAACATTTTAAAAGTGAATAATAACTATTCTCAGAAAAA-TTATCTGAAACTAGGGCATAAGCCCCAAAGATGGGCAGAATA-GGGGGAAG-GTATCCA-------------------AGGCCTGTCCAGGGGAATGACTCAGTCCGTCTCCTTTGTTGCTGT---------------------------TGCCCTGTTGCTTTGGGGATTTTAGTCTGATG-AGATGCAGTAatttctgctcagtgggacagataatcccacagatt-aaggcctgttggacattaaccagtctataccccagaggtcgtcttgtaacctttcttttttaa-------------------------aaatgtgcacagcaaccagtcataacatct-----tactcatttcctcactaataaatg i otoGar3.GL873611 I 1253 C 0 e canFam3.chr6 61050942 763 - 77573801 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 179655 18 + 85365473 I a score=548658.000000 s hg38.chr7_KI270899v1_alt 158208 86 + 190869 aattcaatgaaatcttcgacgtgtgcccattttccatttgctggagaatcacgattttacccttttgaaaattatacgttagcaAC s panTro5.chr7_NW_015973580v1_random 33233 86 - 83720 aattcaatgaaatctttgacgtgtgcccattttccatttgctggagaatcacgattttacccttttgaaaattatatgttagcaAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548307 86 + 162613886 aattcaatgaaatctttgacgtgtgcccattttccatttgctggagaatcacgattttacccttttgaaaattatacgttagcaAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 119848 86 - 432965 aattcaatgaaacctttgacgtgtgcccatttcccatttgctggagaatcacgattttacccttttgaaaattatacgttagcaAC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025628 86 + 185818997 gattaaacaaaatcttcgacgtgtgcccgttttccgtttgctggagaatcacgattttacccctttgaaaattatctgttagcaAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641578 86 + 192294377 gattaaacaaaatcttcgacgtgtgcccgttttccgtttgctggagaatcacgattttacccctttgaaaattatctgttagcaAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409121 86 - 9440265 gattaaacaaaatcttcgacgtgtgcccgttttccgtttgctggagaatcacgattttacccctttgaaaattatctgttagcaAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16996923 86 - 21915920 gattaaacaaaatcttcgacgtgtgcccgttttccgtttgctggagaatcacaattttacccctttgaaaattatctgttagcaAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132655 86 - 21531802 gattaaacgaaatcttcgacatgtgcccgttttccctttgctggagaatcacgattttacccctttgaaaattatatgttagcaAC i chlSab2.chr28 C 0 I 11 s colAng1.NW_012117710v1 324496 86 + 6586416 gattaaacgaaatcttcgacgtgtgcccgttttccgtttgctggagaatcacgattttacccctttgaaaattgtatgttagcaAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 52849 75 + 138751 aattaaatgaaatctt----------ctattttccatttgctggagaatcatgattttacccctttgaaaattatacACTAGCAA- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 367655 84 - 2409723 aattaaacgaaatcttccatgcgtacctattttcca-ttgctggagaatcgtgattttacgcctttgaaaattatacattagcaA- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 531106 85 - 2125214 aattaaacgaaatcttccatgagtacctattttccatttgctgaagaatcatgattttacccctttgaaaattatacattagcaA- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2264351 83 - 8137123 agttaaatgaaatctttgatgtgtgtccatttt-catttgctggggagtcatgatttcacc--tttagaatttacactttagcaAT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61050942 763 - 77573801 I e manLeu1.NW_012101810v1 165856 699 - 2515279 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 179655 18 + 85365473 I a score=12598.000000 s hg38.chr7_KI270899v1_alt 158294 3 + 190869 CAT s panTro5.chr7_NW_015973580v1_random 33319 3 - 83720 CAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548393 3 + 162613886 CAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 119934 3 - 432965 CAT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025714 3 + 185818997 TGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641664 3 + 192294377 TGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409207 3 - 9440265 TGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997009 3 - 21915920 TGT i cerAty1.NW_012002954v1 C 0 C 0 s colAng1.NW_012117710v1 324582 3 + 6586416 CGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 52924 3 + 138751 CGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 367739 3 - 2409723 CGT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 531191 3 - 2125214 CGT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2264434 3 - 8137123 CAT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61050942 763 - 77573801 I e chlSab2.chr28 132741 11 - 21531802 I e manLeu1.NW_012101810v1 165856 699 - 2515279 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 179655 18 + 85365473 I a score=30971.000000 s hg38.chr7_KI270899v1_alt 158297 12 + 190869 AAACTGTTCTCT s panTro5.chr7_NW_015973580v1_random 33322 12 - 83720 AAACTGTTCTCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548396 12 + 162613886 AAACTGTTCTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 119937 12 - 432965 AAACTGTTCTCT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025717 10 + 185818997 AAACAGTTCT-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641667 10 + 192294377 AAACAGTTCT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409210 10 - 9440265 AAACAGTTCT-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997012 10 - 21915920 AAACAGTTCT-- i cerAty1.NW_012002954v1 C 0 C 0 s colAng1.NW_012117710v1 324585 10 + 6586416 AAACGGTTCT-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 52927 12 + 138751 AAATGGTTCTCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 367742 12 - 2409723 AAATGGTTCTCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 531194 12 - 2125214 AAATGGTTCTCT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2264437 7 - 8137123 ACCCTGT----- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61051705 12 - 77573801 AAATTATGTTTA i canFam3.chr6 I 763 C 0 e chlSab2.chr28 132741 11 - 21531802 I e manLeu1.NW_012101810v1 165856 699 - 2515279 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 179655 18 + 85365473 I a score=605132.000000 s hg38.chr7_KI270899v1_alt 158309 98 + 190869 AAGTACATACAGGCAGCAGCTTAAAATCCTCCTGT----------------------------GGGC-------------TAAAGGC---TGGGCAGTCCTATCAGGGCTGTGAT-----GGG--GGGAGGTGGCTGGTTTGTGGAGGA s panTro5.chr7_NW_015973580v1_random 33334 98 - 83720 AAGTACATATAGGCAGCAGCTTAAAATCCTCCTGT----------------------------GGGC-------------TAAAAGC---TGGGCAGTCCTACCAGGGCTGTGAT-----GGG--GGGAGGTGGCTGGTTTGTGGAGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548408 98 + 162613886 AAGTACATATAGGCAGCAGCTTAAAATCCTCCTGT----------------------------GGGC-------------TAAAGGC---TGGGCAGTCCTATCAGGGCTGTGAT-----GGG--GGGAGGTGGCTGGTTTGTGGAGCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 119949 98 - 432965 AAGTACATGTAGGCAGCAGCTTAAAATCCTCCTGT----------------------------GGGC-------------TAAAGGC---TGGGCAGTCCTATCAGGGCTGTGAT-----GGG--GGGAGGTGGCTGGTTTGTGGAGGA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025727 98 + 185818997 GAGTACATACAGGTAGCAGCTAAAGATCCCCCTGT----------------------------GGGC-------------TAAAGGC---TGGGCCATCCTGACAGGGCTGTGAT-----GGG--GGCAGGTGGCTGGTTTGTGGAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641677 98 + 192294377 GAGTACATACAGGTAGCAGCTAAAGATCCCCCTGT----------------------------GGGC-------------TAAAGGC---TGGGCCATCCTGACAGGGCTGTGAT-----GGG--GGCAGGTGGCTGGTTTGTGGAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409220 98 - 9440265 GAGTACATACAGGTAGCAGCTAAAGATCCCCCTGT----------------------------GGGC-------------TAAAGGC---TGGGCCATCCTGACAGGGCTGTGAT-----GGG--GGCAGGTGGCTGGTTTGTGGAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997022 98 - 21915920 GAGTACATATAGGTAGCAGCTAAAGATCCCCCTGT----------------------------GGGC-------------TAAAGGC---TGCGCCATCCTGACAGGGCTGTGAT-----GGG--GGCAGGTGGCTGGTTTGTGGAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132752 97 - 21531802 AGGCAGATACAGGCAGCCGCTGAAGAT-CCCCTGT----------------------------GGGC-------------TAAAGGC---TGGGCCGTCCTGACAGGGCTGTGAT-----GGG--GGCAGGTGGCTGGTTTGTGGAGGA i chlSab2.chr28 I 11 C 0 s colAng1.NW_012117710v1 324595 98 + 6586416 GAGTACACACAGGTAGCAGCTAAAGATCCCCCTGT----------------------------GGGC-------------TAAAGGC---TGGGCCGTCCTGTCAGGGCTGTGAT-----GGG--GGCAGGTGGCTGGTTTGTGGAGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 52939 99 + 138751 GACTACATATAGGTA-CACCTTAAAATCATCCTGT----------------------------AGGC-------------TGAAGGC---TGGGTGGTCCTGTCAGGGCTGTGAT-----GGGTCGGGAGGTAGCTGCTTTGTGGAGGA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 367754 99 - 2409723 GACTACATATAGGTA-CACCTTAAAATCATCCTGT----------------------------GGGC-------------TGAAGGC---TGGGTGGTCCTGTCAGGGCTGTGAT-----GGCTGGGGAGGTGGCTGCTTTGTGGAGGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 531206 99 - 2125214 GACTACATATAGGTA-CACCTTAAAATCATCCTGT----------------------------GGGC-------------TGAAGGC---CGGGTGGTCCTGTCAGGGCTGTCAT-----GGGTAGGGAGGTAGCTGCTTTGTGGAGGA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2264444 96 - 8137123 ----------AGGTAGGAGCTGACAGTTGTCACAT----------------------------GTACCTCCAAGACTAAGTAAGGGC---TGAG-GGTCTTCTCA-GGCTGTGGG-----GTT--GGCAGGAG---GGTTTGTGGGAGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61051717 134 - 77573801 GAGTGCACATAGATACCACCTTAAACTCTTTGTGTACTTCAAAGGCTGGGATAAGGAAGGAAGGGAG-------------TAAAGGCCATTGGGTAGTCTTGTCAGGACTGTGATGTGGAGGG--GAGGAGTGGCTGGTTTGTAGAACA i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 165856 699 - 2515279 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 179655 18 + 85365473 I a score=45096.000000 s hg38.chr7_KI270899v1_alt 158407 12 + 190869 ACTTCccctccc- s panTro5.chr7_NW_015973580v1_random 33432 12 - 83720 ACTTCccctccc- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548506 12 + 162613886 ACTTCccctccc- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120047 12 - 432965 Acttcccctccc- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025825 12 + 185818997 ACTTCccctccc- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641775 12 + 192294377 ACTTCccctccc- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409318 12 - 9440265 Acttcccctccc- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997120 12 - 21915920 ACTTCCCCTCCC- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132849 12 - 21531802 ATTTCccctccc- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 324693 12 + 6586416 ACTTCccctcct- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 53038 7 + 138751 ATTtccc------ i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 367853 7 - 2409723 Acctccc------ i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 531305 7 - 2125214 Acctccc------ i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61051851 12 - 77573801 -CTGACTcatcta i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2264540 0 - 8137123 C e manLeu1.NW_012101810v1 165856 699 - 2515279 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 179655 18 + 85365473 I a score=113647.000000 s hg38.chr7_KI270899v1_alt 158419 23 + 190869 tccctccctc-------------------------------------------cttccttctttcc s panTro5.chr7_NW_015973580v1_random 33444 23 - 83720 tccctccctc-------------------------------------------cttccttctttcc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548518 23 + 162613886 tccctccctc-------------------------------------------cttccttctttcc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120059 23 - 432965 tccctccctc-------------------------------------------cttccttctttcc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025837 23 + 185818997 tccgtccccg-------------------------------------------cttccttctttcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641787 66 + 192294377 tccgtccccgcttccttctttccttccttctcttcttcccccttccctcccttcttccttctttcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409330 23 - 9440265 tccgtcccag-------------------------------------------cttccttctttcc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997132 23 - 21915920 TCCGTCCCCG-------------------------------------------cttccttctttcc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132861 22 - 21531802 tccctccc-c-------------------------------------------cttccttctttcc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166555 23 - 2515279 tccctccctc-------------------------------------------cttccttatttcc i manLeu1.NW_012101810v1 I 699 C 0 s colAng1.NW_012117710v1 324705 23 + 6586416 tccctccccc-------------------------------------------cttccttctttcc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 53045 23 + 138751 tccctccctt-------------------------------------------tttactcctttcc i calJac3.chrUn_GL286444 C 0 I 5 s saiBol1.JH378296 367860 23 - 2409723 tccctccctt-------------------------------------------tctccttctttcc i saiBol1.JH378296 C 0 I 5 s cebCap1.NW_016107703v1 531312 23 - 2125214 tccctccctt-------------------------------------------tttccttctttcc i cebCap1.NW_016107703v1 C 0 I 504 s canFam3.chr6 61051863 2 - 77573801 ---------------------------------------------------------------tc- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2264540 0 - 8137123 C e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 179655 18 + 85365473 I a score=7668.000000 s hg38.chr7_KI270899v1_alt 158442 3 + 190869 ttc s panTro5.chr7_NW_015973580v1_random 33467 3 - 83720 ttc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548541 3 + 162613886 ttc i panPan2.chr7 C 0 M 258 s gorGor5.CYUI01015914v1 120082 3 - 432965 ttc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025860 3 + 185818997 ttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641853 3 + 192294377 ttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409353 3 - 9440265 ttc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997155 3 - 21915920 ttc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132883 3 - 21531802 ttc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166578 3 - 2515279 atc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 324728 3 + 6586416 ttc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 53073 2 + 138751 tt- i calJac3.chrUn_GL286444 I 5 C 0 s saiBol1.JH378296 367888 2 - 2409723 tt- i saiBol1.JH378296 I 5 C 0 e otoGar3.GL873611 2264540 0 - 8137123 C e canFam3.chr6 61051865 0 - 77573801 C e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I a score=157204.000000 s hg38.chr7_KI270899v1_alt 158445 33 + 190869 cctctcttcttccccc-ttccctccctccttccc s panTro5.chr7_NW_015973580v1_random 33470 33 - 83720 cttctcttcttccccc-ttccctccctccttccc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 120085 33 - 432965 cctctcttcttccccc-ttccctccctccttccc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025863 33 + 185818997 cttctcttcttccccc-ttccctcccttcttcct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641856 33 + 192294377 cttctcttcttccccc-ttccctcccttcttccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409356 33 - 9440265 cttctcttcttccccc-ttccctcccttcttcct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997158 33 - 21915920 cttctcttcttccccc-ttccctcccttcttcct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132886 33 - 21531802 cttctcttcttccccc-ttccctccctcctccac i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166581 34 - 2515279 cctctcttcttcctccgttccctcccttgttccc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 324731 33 + 6586416 cttctcttcttccccc-ttccctccctccttccc i colAng1.NW_012117710v1 C 0 I 285 s calJac3.chrUn_GL286444 53075 34 + 138751 cttcccctcttccctccctccttcccttgctcct i calJac3.chrUn_GL286444 C 0 I 4 s saiBol1.JH378296 367890 34 - 2409723 cttcccctcttccctctttccctTGCTTCTtccc i saiBol1.JH378296 C 0 I 4 s canFam3.chr6 61051865 26 - 77573801 -------tattaaccc-atccactcatccatgta i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2264540 0 - 8137123 C e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I e panPan2.chr7 548544 258 + 162613886 M a score=133316.000000 s hg38.chr7_KI270899v1_alt 158478 41 + 190869 tccctccctccttccc----tccctc-cc----------------tccttccctcccttcct s panTro5.chr7_NW_015973580v1_random 33503 57 - 83720 tccctccctccttccc----tccctc-cctacttcccaccctccttccttctctcccttcct i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 120118 41 - 432965 tccctccctacttcac----accctc-ct----------------tccttccctcccttcct i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025896 40 + 185818997 tctttccttccttctc----ttcttc-cc-----------------ccttccctcccttctt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641889 41 + 192294377 tccctccctgcttccc----ttcctctct-----------------ccttccctccctttct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409389 40 - 9440265 tctttccttccttctc----ttcttc-cc-----------------ccttccctcccttctt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997191 40 - 21915920 tctttccttccttctc----ttcTTC-TC-----------------CCTTCCCTCCCTTCTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132919 37 - 21531802 tccctccttcctccct----tc---t-tt-----------------ccttccttctcttctt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166615 40 - 2515279 tccctccctgcttccc----tccttc-tt-----------------ccttccctcccttctt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 325049 40 + 6586416 tccctccctccttccc----tccctc-cc-----------------tgcttccctccttctt i colAng1.NW_012117710v1 I 285 C 0 s calJac3.chrUn_GL286444 53113 41 + 138751 tctctccctccttccc----tccctc-tc----------------tccttccttccctccct i calJac3.chrUn_GL286444 I 4 C 0 s saiBol1.JH378296 367928 45 - 2409723 tccctccctccttccctctgtccctc-tc----------------tccttccttccctccct i saiBol1.JH378296 I 4 C 0 s canFam3.chr6 61051891 24 - 77573801 ---------------------tctac-cc----------------accccatatccattcat i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2264540 0 - 8137123 C e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I e panPan2.chr7 548544 258 + 162613886 M a score=9100.000000 s hg38.chr7_KI270899v1_alt 158519 1 + 190869 c s panTro5.chr7_NW_015973580v1_random 33560 1 - 83720 c i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548802 1 + 162613886 c i panPan2.chr7 M 258 C 0 s gorGor5.CYUI01015914v1 120159 1 - 432965 c i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34025936 1 + 185818997 c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641930 1 + 192294377 c i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409429 1 - 9440265 c i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997231 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132956 1 - 21531802 c i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166655 1 - 2515279 c i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 325089 1 + 6586416 c i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 53154 1 + 138751 c i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 367973 1 - 2409723 c i saiBol1.JH378296 C 0 C 0 s canFam3.chr6 61051915 1 - 77573801 c i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2264540 0 - 8137123 C e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I a score=52655.000000 s hg38.chr7_KI270899v1_alt 158520 10 + 190869 cttc----cctccc s panTro5.chr7_NW_015973580v1_random 33561 10 - 83720 cttc----cctccc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548803 10 + 162613886 cttc----cctccc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120160 10 - 432965 cttc----cctccc i gorGor5.CYUI01015914v1 C 0 I 151 s rheMac8.chr3 34025937 10 + 185818997 cctc----cctccc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33641931 10 + 192294377 cttt----cttccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409430 10 - 9440265 cctc----cctccc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16997232 10 - 21915920 CCTC----CCTCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 132957 10 - 21531802 cctc----tctccc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166656 14 - 2515279 cttccttttctctg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 325090 10 + 6586416 cttc----cctccc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 53155 10 + 138751 tctc----cttact i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 367974 10 - 2409723 cctc----cctcct i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2264540 10 - 8137123 CACC----CCTGCC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61051916 10 - 77573801 catc----catcac i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I a score=7847.000000 s hg38.chr7_KI270899v1_alt 158530 1 + 190869 t s panTro5.chr7_NW_015973580v1_random 33571 1 - 83720 t i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548813 1 + 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120321 1 - 432965 t i gorGor5.CYUI01015914v1 I 151 C 0 s rheMac8.chr3 34025947 1 + 185818997 t i rheMac8.chr3 C 0 I 473 s macFas5.chr3 33641941 1 + 192294377 t i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409440 1 - 9440265 t i macNem1.NW_012019910v1 C 0 I 498 s cerAty1.NW_012002954v1 16997242 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 I 764 s chlSab2.chr28 132967 1 - 21531802 t i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166670 1 - 2515279 t i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 325100 1 + 6586416 t i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 53165 1 + 138751 t i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 367984 1 - 2409723 t i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2264550 1 - 8137123 T i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61051926 1 - 77573801 c i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I a score=12770.000000 s hg38.chr7_KI270899v1_alt 158531 4 + 190869 --ccct s panTro5.chr7_NW_015973580v1_random 33572 4 - 83720 --ccct i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548814 4 + 162613886 --ccct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120322 4 - 432965 --ccct i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33641942 4 + 192294377 --ctct i macFas5.chr3 C 0 I 373 s chlSab2.chr28 132968 4 - 21531802 --ccct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166671 4 - 2515279 --ccct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 325101 4 + 6586416 --tcct i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chrUn_GL286444 53166 4 + 138751 --ccct i calJac3.chrUn_GL286444 C 0 I 9 s saiBol1.JH378296 367985 4 - 2409723 --ccct i saiBol1.JH378296 C 0 I 9 s otoGar3.GL873611 2264551 4 - 8137123 --GCCT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61051927 4 - 77573801 cacc-- i canFam3.chr6 C 0 C 0 e cerAty1.NW_012002954v1 16997243 764 - 21915920 I e macNem1.NW_012019910v1 4409441 498 - 9440265 I e rheMac8.chr3 34025948 473 + 185818997 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I a score=38734.000000 s hg38.chr7_KI270899v1_alt 158535 28 + 190869 cctcccttcctccttcctattct-c----tgtc s panTro5.chr7_NW_015973580v1_random 33576 28 - 83720 cctcccttcctccttccttttct-c----tgtc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548818 29 + 162613886 cctcccttcctccttccttttctcc----tgtc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120326 28 - 432965 cctcccttcttccttccttttct-c----tgtc i gorGor5.CYUI01015914v1 C 0 C 0 s macFas5.chr3 33642319 28 + 192294377 cctcccttcttccttccttttct-ctgtc---- i macFas5.chr3 I 373 C 0 s chlSab2.chr28 132972 21 - 21531802 ---ccttccctccctccctgctt-c-------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166675 21 - 2515279 ---ccttccttccctcccactct-c-------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 325106 24 + 6586416 cttccttctctctgtccctcctt-c-------- i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chrUn_GL286444 53179 24 + 138751 cttccctccctccttccctccct-c-------- i calJac3.chrUn_GL286444 I 9 C 0 s saiBol1.JH378296 367998 24 - 2409723 cttccttccctcccttcttcctt-c-------- i saiBol1.JH378296 I 9 C 0 s otoGar3.GL873611 2264555 13 - 8137123 CCCCCCTTTCTCC-------------------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61051931 28 - 77573801 catccactcatccatccacctat-c----tatc i canFam3.chr6 C 0 C 0 e cerAty1.NW_012002954v1 16997243 764 - 21915920 I e macNem1.NW_012019910v1 4409441 498 - 9440265 I e rheMac8.chr3 34025948 473 + 185818997 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I a score=67022.000000 s hg38.chr7_KI270899v1_alt 158563 32 + 190869 cctc---cgtccttccctccctccctccttccctc s panTro5.chr7_NW_015973580v1_random 33604 16 - 83720 cctc---cg----------------tccttccctc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548847 16 + 162613886 cctc---cg----------------tccttccctc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120354 32 - 432965 cctc---cgtccttccctccctccctccttccctc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34026421 24 + 185818997 cctc---ctttctttct--------tcccttcctc i rheMac8.chr3 I 473 I 1 s macFas5.chr3 33642347 24 + 192294377 cctc---cttccttccc--------tcccactctc i macFas5.chr3 C 0 I 25 s cerAty1.NW_012002954v1 16998007 24 - 21915920 cctc---ctttctttct--------tcccttcctc i cerAty1.NW_012002954v1 I 764 I 1 s chlSab2.chr28 132993 27 - 21531802 cctccttcttccttccc--------tcccttcttc i chlSab2.chr28 C 0 I 4 s manLeu1.NW_012101810v1 166696 24 - 2515279 cctc---ctttctttct--------tcccttcctc i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 325130 24 + 6586416 cctc---cctccctctc--------tccctccttt i colAng1.NW_012117710v1 C 0 I 17 s calJac3.chrUn_GL286444 53203 32 + 138751 tctc---cctccttccctccctctctccttccttc i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 368022 32 - 2409723 tctc---cctccttccctccctgtctccttccttc i saiBol1.JH378296 C 0 C 0 s canFam3.chr6 61051959 32 - 77573801 catc---catatgtccatctgtccatccTCCTTTC i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2264568 0 - 8137123 C e macNem1.NW_012019910v1 4409441 498 - 9440265 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I a score=161772.000000 s hg38.chr7_KI270899v1_alt 158595 35 + 190869 ccttcctccctctctccct-ctttccctccttccTT s panTro5.chr7_NW_015973580v1_random 33620 35 - 83720 ccttcctccctctctccct-ctttccctccttccTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548863 35 + 162613886 ccttcctccctctctccct-ctttccctccttccTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120386 35 - 432965 ccttcctccctctctccct-ctttccctccttcctt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34026446 35 + 185818997 cctttctctgtccctccct-tcttctctccttccTT i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33642396 35 + 192294377 cctttctctgtccctccct-tcttctctccttccTT i macFas5.chr3 I 25 C 0 s macNem1.NW_012019910v1 4409939 35 - 9440265 cctttctctgtccctccct-tcttctctccttcctt i macNem1.NW_012019910v1 I 498 C 0 s cerAty1.NW_012002954v1 16998032 35 - 21915920 cctttctctgtccctccct-tcttctctccttcctt i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 133024 35 - 21531802 cttttctctgtccctccct-tcttctctccttcctC i chlSab2.chr28 I 4 C 0 s manLeu1.NW_012101810v1 166721 35 - 2515279 cctttctctgtccctccct-tcttctctccttcctt i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 325171 35 + 6586416 cgtttctctgtccctccct-tcttctctccttccTT i colAng1.NW_012117710v1 I 17 C 0 s calJac3.chrUn_GL286444 53235 36 + 138751 cctccctctctccttccttcccttccctccctcctt i calJac3.chrUn_GL286444 C 0 I 1008 s saiBol1.JH378296 368054 35 - 2409723 cctccctccctccctgctt-ccttccctctgtcctt i saiBol1.JH378296 C 0 I 655 s otoGar3.GL873611 2264568 4 - 8137123 --------------------------------CCTT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61051991 12 - 77573801 ----ATGGTGCACCTC-------------------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e nomLeu3.chr20 179655 18 + 85365473 I a score=3575.000000 s hg38.chr7_KI270899v1_alt 158630 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 33655 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548898 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120421 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34026481 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33642431 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4409974 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16998067 1 - 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 133059 1 - 21531802 A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 166756 1 - 2515279 A i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 325206 1 + 6586416 G i colAng1.NW_012117710v1 C 0 I 14 s otoGar3.GL873611 2264572 1 - 8137123 G i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61052003 0 - 77573801 C e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I e nomLeu3.chr20 179655 18 + 85365473 I a score=14290.000000 s hg38.chr7_KI270899v1_alt 158631 3 + 190869 TGT s panTro5.chr7_NW_015973580v1_random 33656 3 - 83720 TGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548899 3 + 162613886 TGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120422 3 - 432965 TGT i gorGor5.CYUI01015914v1 C 0 I 11 s rheMac8.chr3 34026482 3 + 185818997 TGT i rheMac8.chr3 C 0 I 11 s macFas5.chr3 33642432 3 + 192294377 TGT i macFas5.chr3 C 0 I 3 s macNem1.NW_012019910v1 4409975 3 - 9440265 TGT i macNem1.NW_012019910v1 C 0 I 11 s cerAty1.NW_012002954v1 16998068 3 - 21915920 TGT i cerAty1.NW_012002954v1 C 0 I 11 s chlSab2.chr28 133060 3 - 21531802 TGC i chlSab2.chr28 C 0 I 3 s manLeu1.NW_012101810v1 166757 3 - 2515279 TGT i manLeu1.NW_012101810v1 C 0 I 11 s otoGar3.GL873611 2264573 3 - 8137123 TGT i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 325207 14 + 6586416 I e canFam3.chr6 61052003 0 - 77573801 C e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I e nomLeu3.chr20 179655 18 + 85365473 I a score=1826.000000 s hg38.chr7_KI270899v1_alt 158634 3 + 190869 GAG s panTro5.chr7_NW_015973580v1_random 33659 3 - 83720 GAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548902 3 + 162613886 GAG i panPan2.chr7 C 0 C 0 s macFas5.chr3 33642438 3 + 192294377 GTG i macFas5.chr3 I 3 I 5 s chlSab2.chr28 133066 3 - 21531802 GTG i chlSab2.chr28 I 3 I 5 s otoGar3.GL873611 2264576 1 - 8137123 --G i otoGar3.GL873611 C 0 I 2 e colAng1.NW_012117710v1 325207 14 + 6586416 I e canFam3.chr6 61052003 0 - 77573801 C e manLeu1.NW_012101810v1 166760 11 - 2515279 I e cerAty1.NW_012002954v1 16998071 11 - 21915920 I e macNem1.NW_012019910v1 4409978 11 - 9440265 I e rheMac8.chr3 34026485 11 + 185818997 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I e nomLeu3.chr20 179655 18 + 85365473 I e gorGor5.CYUI01015914v1 120425 11 - 432965 I a score=2176620.000000 s hg38.chr7_KI270899v1_alt 158637 484 + 190869 ACA-TGTGAGAGTCTCACCCCAGCCTTGGGGGACAC---AGCAGGACGCAGGCAGTGGGTGTAG-------------------TGGCCACTGGGTGGGCTGGAGGGGGCTGCTCAGAGGAAGTCT-C-TCTGAGT--GCTTGGGG---------AATGAAA--GGCCTTTAATGAGTAGAGACCG-GAAAGGAGCAAATGCTTGTGTGTTTCTCAAGAAAACAGTGTGAGGGAAGGCACAGAAGCAGC-TGGAGGAACAGGAACAGCTGGGGAAAGGGCACGCGTGGCCAG----ACAAGGAGGTCT--AGAAGAGGCAGTGCCCTCACTCTCTGCACAGACCTC------GTGCTGGGGATGGATGGAGACC-AAGAGT----CTGACCTTC--TAGTGGGGGGTGTTTGAAAGCCCCTTAGGGCCCTGCCACCTGTGGTTTGGTGTTGACAACACCTGCTCTTCCCTGGGGGATCCGTGGACCTCCCTGCATGGTGCATGTGGCAGGGCCCTGTGGCTCCAGAAAATTCCTGGCCACCGTT s panTro5.chr7_NW_015973580v1_random 33662 486 - 83720 ACA-TGTGAGAGTCTCACCCCAGCCTTGGGGGACAC---AGCAAGACGCAGGCAGTGGGTGTAG-------------------TGGCCACTGGGTGGGCTGGAGGGGGCTGTTCGGAGGAAGTCT-C-TCTGAGT--GCTTGGGG---------AATGAAA--GGCCTTTAATGAGTAGAGACAG-GAAAGGAGCAAATGCTTGTGTGTTTCTCAAGGAAACAGTGTGAGGGAAGGCACAGAAGCAGC-TGGAGGAACAGGAACAGCCGGGGAAAGGGCACACGTGGCCAG----ACAAGGAGGCCTTCCAAGGAGGCAGTGCCCTCACTCTCTGCACAGACCTC------GTGCTGGGGATGGATGGAGACC-AAGAGT----CTGACCTTC--TAGTGGGGGGTGTTTGAAAGCCCCTTAGGGCCCTGCCACCTGTGGTTTGGTGTTGACAACACCTGCTCTTCCCTGGGGAATCTGTGGGCCTCCCTGCATGGGGCATGTGGCAGGGCCCTGTGGCTCCAGAAAATTCCTGGCCACCGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 548905 486 + 162613886 ACA-TGTGAGAGTCTCACCCCAGCCTTGGGGGACAC---AGCAAGACGCAGGCAGTGGGTGTAG-------------------TGGCCACTGGGTGGGCTGGAGGGGGCTGCTCGGAGGAAGTCT-C-TCTGAGT--GCTTGGGG---------AATGAAA--GGCCTTTAATGAGTAGAGACAG-GAAAGGAGCAAATGCTTGTGTGTTTCTCAAGGAAACAGTGTGAGGGAAGGCACAGAAGCAGC-TGGAGGAACAGGAACAGCCGGGGAAAGGGCACACGTGGCCAG----ACAAGGAGGCCTTCCAAGGAGGCAGTGCCCTCACTCTCTGCACAGACCTC------GTGCTGGGGATGGATGGAGACC-AAGAGT----CTGACCTTC--TAGTGGGGGGTGTTTGAAAGCCCCTTAGGGCCCTGCCACCTGTGGTTTGGTGTTGACAACACCTGCTCTTCCCTGGGGAATCTGTGGGCCTCCCTGCATGGGGCATGTGGCAGGGCCCTGTGGCTCCAGAAAATTCCTGGCCACCGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120436 484 - 432965 ACA-TGTGACAGTCTCACCCCAGCCTTGGGGGACAC---AGCAGGACGCAGGCAGTTGGTGTAG-------------------TGGCCACTGGGTGGGCTGGA-GGGGCTGCTCGGAGGAAGTCT-C-TCTGAGT--GCTTGGGG---------AATGAAA--GGCCTTTAATGAGTAGAGACAG-GAAAGGAGCAAATGCTTGTGTGTTTCTCAAGGAAACAGTGTGAGGGAAGGCACAGAAGCAGC-TGGAGGAACAGGAACAGCCGGGGAAAGGGCACCCGTGGCCAG----ACAAAGAGGTCTTCTAGGGAGGCAGCGCCCTCACTCTCTGCACAGACCTC------GTGCTGGGGATGGATGGAGACC-AAGAGT----CTGACCTTC--TAGTGGGGGGTGTTTGAAAGCCCCTTAGGGCCCTGCCACCTGTGGTTTGGTGTTGACAACACCTGCTCTTCCCTGGGG-ATCCGTGGACCTCCCTGCATGGGGCATGTGGCAGGGCCCTGTGGCTCCAGAAAATTCCTGGCCACCGTG i gorGor5.CYUI01015914v1 I 11 C 0 s rheMac8.chr3 34026496 481 + 185818997 ACA-TGTGAGAGTCTCACCCCAGCCTTGGGGTACGC---AGCAGGACGCAGGCAGTGGGTGTGG--------------------GGCCACCGGGT-GCCCGGAGAGGTCTGCTCAGAGGAAGTAG-C-TGTGAGT--GTTTGGGG---------AATGAAA--GGCCTTTAATGAGTGGAGACAG-GGAAGGAGCAAATGCTTGTGTGTTTCCCAAGGAAACGGTGTGA-GGAAGGCCCAGGAGTGGC-TGGAGGCACAGGGACAGCTGGGGAAAGGGCACGCGTGGCCAG----ACAAGGAGGTCTGCCAGGGAGGCAGCGCCCTCCCTCTCTGCACGGACCTC------GTGCTGGGGCTCGAGGGAGACC-AAGAGT----CTGACCTTC--CAGTGGGTGGTGTCTGAAAGTCCTGTAGGGCCCTGCCACCTGTGGCTCGGTGTTGACAACACCTGCTTTTCCCTGGGGGAT--GTGGGCCTCCCTGCATGGGGCATGTGGCAGGACCCTGTGGCTTCAGCAAAGGCCTGGCCGCCGTG i rheMac8.chr3 I 11 I 1 s macFas5.chr3 33642446 481 + 192294377 ACA-TGTGAGAGTCTCACCCCAGCCTTGGGGTACGC---AGCAGGACGCAGGCAGTGGGTGTGG--------------------GGCCACCGGGT-GCCCGGAGAGGTCTGCTCAGAGGAAGTAG-C-TGTGAGT--GTTTGGGG---------AATGAAA--GGCCTTTAATGAGTGGAGACAG-GGAAGGAGCAAATGCTTGTGTGTTTCCCAAGGAAACGGTGTGA-GGAAGGCCCAGGAGTGGC-TGGAGGCACAGGGACAGCTGGGGAAAGGGCACGCGTGGCCAG----ACAAGGAGGTCTGCCAGGGAGGCAGCGCCCTCCCTCTCTGCACGGACCTC------GTGCTGGGGCTCGAGGGAGACC-AAGAGT----CTGACCTTC--CAGTGGGTGGTGTCTGAAAGTCCTGTAGGGCCCTGCCACCTGTGGCTCGGTGTTGACAACACCTGCTTTTCCCTGGGGGAT--GTGGGCCTCCCTGCATGGGGCATGTGGCAGGACCCTGTGGCTTCAGCAAAGGCCTGGCCGCTGTG i macFas5.chr3 I 5 I 1 s macNem1.NW_012019910v1 4409989 481 - 9440265 ACA-TGTGAGAGTCTCACCCCAACCTTGGGGTACGC---AGCAGGACGCAGGCAGTGGGTGTGG--------------------GGCCACCGGGT-GCCCGGAGAGGTCTGCTCAGAGGAAGTAG-C-TGTGAGT--GTTTGGGG---------AATGAAA--GGCCTTTAATGAGTGGAGACAG-GGAAGGAGCAAATGCTTGTGTGTTTCCCAAGGAAACGGTGTGA-GGAAGGCCCAGGAGTGGC-TGGAGGCACAGGGACAGCTGGGGAAAGGGCACGCGTGGCCAG----ACAAGGAGGTCTGCCAGGGAGGCAGCGCCCTCCCTCTCTGCACGGACCTC------GTGCTGGGGCTCGAGGGAGACC-AAGAGT----CTGACCTTC--CAGTGGGTGGTGTCTGAAAGTCCTGTAGGGCCCTGCCACCTGTGGCTCGGTGTTGACAACACCTGCTTTTCCCTGGGGGAT--GTGGGCCTCCCTGCATGGGGCATGTGGCAGGACCCTGTGGCTTCAGCAAAGGCCTGGCCGCTGTG i macNem1.NW_012019910v1 I 11 I 1 s cerAty1.NW_012002954v1 16998082 481 - 21915920 ACA-TGTGAGAGTCTCACCCCAGCCTTGGGGGACGC---AGCAGGACGCAGGCAGTGGGTGTGG--------------------GGCCACCGGGT-GCCCGGAGAGGTCTGCTCAGAGGAAGTAG-C-TGTGAGT--GTTTGGGG---------AATGAAA--GGCCTTTAATGAGTGGAGACAG-GGAAGGAGCAAATGCTTGTGTGTTTCCCAAGGAAACGGTGTGA-GGAAGGCCCAGGAGTGGC-TGGAGGCACAGGGACAGCTGGGGAAAGGGCACGCGTGGCCAG----ACAAGGAGGTCTGCCAGGGAGGCAGCACCCTCCCTCTCTGCACGGACCTC------GTGCTGGGGCTCGAGGGAGACC-AAGAGT----CTGACCTTC--CAGTGGGTGGTGTCTGAAAGTCCTGTAGGGCCCTGCCACCTGTGGCTCGGTGTTGACAACACCTGCTTTTCCCTGGGGGAT--GTGGGCCTCCCTGCATGGGGCATGTGGCAGGACCCTGTGGCTTCAGCAAAGGCCTGGCCGCCGTG i cerAty1.NW_012002954v1 I 11 I 1 s chlSab2.chr28 133074 453 - 21531802 ACA-TGTGAGAGTCTCACCCCAGCCTTGGGGGACGC---AGCAGGACGCAGGCAGTGTCTGTGG--------------------GGCCACCGGGT-GCCCGGAGAGGTCTGCTCAGAGGAAGTAG-C-TGTGAGT--GTTTGGGG---------AATGAAA--AGCCTTTAATGAGTGGAGACAG-GGAACGAGCAAATGCTTGCGTGTTTCCCAAGGAAACGGTGTGA-GGAAGGCCCAGGAGTGGC-TGGAGGCACAGGGACAGCTGGGGAAAGGGCACGCGTGGCCAG----ACAAGGAGGTCCGCTAGGGAGGCAGCGCCCTCACTCTCGGCACGGACCTC------GTGCTGGGGCTCAACGGAGACC-AAGAGT----CTGACCTTC--CAGTGGGGGGTGTCTGAAAGCCCCGTAGGGCCCTGCCACCCGTGGTTCGGTGTTGACGACACCTGCTTTTCCCTGGGGCAT--CCGT----------------------------CCCTGTGGCTCCAGCAAAGGCCTGGCCGCCGTG i chlSab2.chr28 I 5 I 1 s manLeu1.NW_012101810v1 166771 481 - 2515279 ACA-TGTAAGAGTCTCACCCCAGCCTTGGGGGACGC---AGCAGGACGCAGGCAGTGGGGGTGG--------------------GGCCACCGGGT-GCCCGGAGAGGTCTGCTCAGAGGAAGTAG-C-TGTGAGT--GTTTGGGG---------AATGAAA--GGCCTTTAATGAGTGGAGATAG-GGAAGGAGCAAATGCTTGTGTGTTTCCCAAGGAAACGGTGTGA-GGAAGGCCCAGGAGTGGC-TGGAGGCACAGGGACAGCTGGGGAAAGGGCACGCGTGGCCAG----ACAAGGAGGTCTGCCAGGGAGACAGCGCCCTCCCTCTCTGCACGGACCTC------GTGCTGGGGCTCAAGGGAGACC-AATTGT----CTGACCTTC--CAGTGGGTGGTGTCTGAAAGTCCTGTAGGGCCCTGCCACCTGTGGCTCGGTGTTGACAACACCTGCTTTTCCCTGGGGGAT--GTGGGCCTCCCTGCATGGGGCATGTGGCAGGACCCTGTGGCTTCAGCAAAGGCCTGGCTGCCGTG i manLeu1.NW_012101810v1 I 11 I 1 s colAng1.NW_012117710v1 325221 483 + 6586416 ACA-TGTGAGAGTCTCACCCCAGCCCCGGGGGACAC---AGCAGGATGCAGGCAGTGGGTGTGG--------------------GGCCACCGGGT-GCCCGGAGAGGTCTGCTCAGAGGAAGCAG-C-TGTGAGT--TCTTGGGG---------AGTGAAA--GGCCTTTAATGAGTGGAGACGG-GGAAGGAGCAAATGCTTGTGTGTTTCCCAAGGAAAAGGTGTGA-GGAAGGCCCAGGAGTGGC-CGGAGGCACAGGGACAGCTGGGGACAGGGCACGCGTGGTCAG----ACAAGGAGGTCTGCTGGGGAGTCAGCGCCCTCACTCTCTGCACGGACCTC------ATGCTGGGGCTCGACGGAGACC-GAGAGT----CTGACCTTC--TGGTGGGGGGTGTCTGAAAGCCCTGTAGGGCCCTGACACCCGTGGTTTGGTGTTGACAACACCTGCTTTTCCCTGGGGGATCCGCGGGCCTCCCTGCGTGGGGCGTGTGGCAGGGCCCTGTGGCTCCGGCAAAGGCCTGGCTGCCATG i colAng1.NW_012117710v1 I 14 I 1 s otoGar3.GL873611 2264579 409 - 8137123 -CACTGTGAGGGTCTCACACTGGCCC---------------CAGGAGGCAGGCAGAGG--GCTG--------------------GGTTACTAGGTGGGTCCAGGAG--CTTCTCAGAGGAGGGAGCC-TTTGAAT--GTAGGGGGGCTGGTGGTGATGAAG--GAGTTCCAGTCAGTGGA-ACAG-G--AGTGGCAGGTGTCCAAG---TTTCCAAGGACA---TGTCAAGGAA----------------GAAGGCACAGG----GCCAGGGGAACATAGTGCATGGGAGG----GCAAGGAGGTCTGC--ATGGGGCAACA-CATCACTCCCTACATGGACCACCTCTGGGCACCGGGGCTTGGTGGAGACCTGAGAGTGGTCCTGGCCT----------------------GACCTCATGTGGCCCTACCACC-ATGGTTTGGTGTAGA-AACACCTGGCACTATCAGGACCCC--TGGGACTTTGCTGTGTGGGGCATATGG---------GTGTCCACGGGA----------------- i otoGar3.GL873611 I 2 C 0 s canFam3.chr6 61052003 432 - 77573801 ACC-TGTGAGGGTCTGGCAGTAACCTCAGGAGAGACTTTGGCAAGAAGCAGACAGAGGGGGGTGAGGGCCACTAGACAAGGTTAAGCCCCTGAGTCGGTGGAAGGCAGCTGCTTAGAGGAAGCAA-CATCTGAATAGGCCTTGGG---------GGTGGGGTTGGGTTTTAAC-AGTGGAGACGACGGGAGGAGCAAGTGTTCTCATATTTCCAGAAGAGATGGTGTGAAAGGAGGCACAGAAGTGGCAAGGAGGGGCATGACCAATTGGGGAAAGTGCTGGGCTCATCAAGGGTGTGAAGAGGTATGCTCA-GAGGCAG---CTTCATTC----------ACTC------ACTCTGCACCTGGGTGGGGCCC-A---------CAGATATTCATCAAAGGTGAGCATGTGGAAGGGCCTGGAGGC--------------------------------------TACCTGAGC-----GTGGCCCTCT-----------------GAGGGCC---TGTCTCTCTCAGGAGCACAGTT------ i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I e nomLeu3.chr20 179655 18 + 85365473 I a score=297386.000000 s hg38.chr7_KI270899v1_alt 159121 54 + 190869 GGGGTGCGGGGCAGGGTCAGTGTGCCCGGGTCCATGCCAGGCCACCGCTGCCCC s panTro5.chr7_NW_015973580v1_random 34148 54 - 83720 GGGGTGCGGGGCAGGGTCAGTGTGCCCAGGTCCATGCCAGGCCACCACTGCCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549391 54 + 162613886 GGGGTGCGGGGCAGGGTCAGTGTGCCCAGGTCCATGCCAGGCCACCACTGCCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120920 54 - 432965 GGGGTGCAGGGCAGGTTCAGTGTGCCCGGGTCCATGCCAGGCCACCGCTGCCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179673 54 + 85365473 GGGGTGCGGGGCAGGGTCCGTGTGCCCGGGTCCATGCCAGGCCACCGCTGCCCC i nomLeu3.chr20 I 18 C 0 s rheMac8.chr3 34026978 54 + 185818997 GGGCTGCGGGGCGGGGTCAGTGTGCCCATGTCCATGCCAGGCCACCGCTGCCCC i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33642928 54 + 192294377 GGGCTGCAGGGCGGGGTCAGTGTGCCCATGTCCATGCCAGGCCACCGCTGCCCC i macFas5.chr3 I 1 I 130 s macNem1.NW_012019910v1 4410471 54 - 9440265 GGGCTGCGGGGCGGGGTCAGTGTGCCCATGTCCATGCCAGGCCACCGCTGCCCC i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 16998564 54 - 21915920 GGGCTGCAGGGCGGGGTCAGTGTGCCCATGTCCATGCCAGGCCACCGCTGCCCC i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 133528 54 - 21531802 GGGCTGTGGGGCAGGGTCAGTGTGCCCACGTCCATGCCAGGCCACCGCTGGCCC i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 167253 54 - 2515279 GGGCTGCGGGGCAGGGTCAGTGTGCCCATGTCCATGCCAGGCCACCGCTGCCCC i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 325705 54 + 6586416 GGGCTGCAGGGCGGGGTCAGTGTGCCCGTGTCCATGCCAGGCCACTGCTGCCCC i colAng1.NW_012117710v1 I 1 C 0 s otoGar3.GL873611 2264988 36 - 8137123 GGGGAGCCAGGCAGGACCC-TGTA---GGGGCCATGTCCG-------------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61052435 40 - 77573801 AGGGTGC----------CAGTCCTCCCTTGACATCTCTGGGAC----CTGGCTC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=8710.000000 s hg38.chr7_KI270899v1_alt 159175 2 + 190869 CC s panTro5.chr7_NW_015973580v1_random 34202 2 - 83720 CC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549445 2 + 162613886 CC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120974 2 - 432965 CC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179727 2 + 85365473 CC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027032 2 + 185818997 CT i rheMac8.chr3 C 0 I 131 s macFas5.chr3 33643112 2 + 192294377 CC i macFas5.chr3 I 130 I 1 s macNem1.NW_012019910v1 4410525 2 - 9440265 CT i macNem1.NW_012019910v1 C 0 I 175 s cerAty1.NW_012002954v1 16998618 2 - 21915920 CT i cerAty1.NW_012002954v1 C 0 I 259 s chlSab2.chr28 133582 2 - 21531802 CC i chlSab2.chr28 C 0 I 86 s manLeu1.NW_012101810v1 167307 2 - 2515279 CT i manLeu1.NW_012101810v1 C 0 I 218 s colAng1.NW_012117710v1 325759 2 + 6586416 CC i colAng1.NW_012117710v1 C 0 C 0 s canFam3.chr6 61052475 1 - 77573801 -T i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2265024 0 - 8137123 C e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=1365.000000 s hg38.chr7_KI270899v1_alt 159177 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 34204 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549447 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120976 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179729 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 325761 1 + 6586416 A i colAng1.NW_012117710v1 C 0 I 307 e otoGar3.GL873611 2265024 0 - 8137123 C e canFam3.chr6 61052476 0 - 77573801 C e chlSab2.chr28 133584 86 - 21531802 I e manLeu1.NW_012101810v1 167309 218 - 2515279 I e cerAty1.NW_012002954v1 16998620 259 - 21915920 I e macNem1.NW_012019910v1 4410527 175 - 9440265 I e macFas5.chr3 33643114 1 + 192294377 I e rheMac8.chr3 34027034 131 + 185818997 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=160423.000000 s hg38.chr7_KI270899v1_alt 159178 34 + 190869 GGCTCACGACAGGACGGCGAG-------------------------------TGCTCCACACAGG s panTro5.chr7_NW_015973580v1_random 34205 65 - 83720 GGCTCACGACAGGATGGCGAGTGCTCCACACAGGTGGGGTGCCCTAGTCAACTGCTCCACACAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549448 65 + 162613886 GGCTCACGACAGGATGGCGAGTGCTCCACACAGGTGGGGTGCCCTAGTCAAGTGCTCCACACAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 120977 65 - 432965 GGCTCACGACAGGACGGCGAGTGCTCCACACAGGTGGGGTGCCCTAGTCAAGTGCTCCACACAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179730 34 + 85365473 GGCTCACGACAGGAGGACAAG-------------------------------TGCTCCACACAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027165 34 + 185818997 GGCCCACGACAGGATGGCGAG-------------------------------TCCTCCACACAGG i rheMac8.chr3 I 131 C 0 s macFas5.chr3 33643115 34 + 192294377 GGCCCACGACAGGATGGCGAG-------------------------------TCCTCCACACAGG i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4410702 34 - 9440265 GGCCCATGACAGGATGGCGAG-------------------------------TCCTCCACACAGG i macNem1.NW_012019910v1 I 175 C 0 s cerAty1.NW_012002954v1 16998879 34 - 21915920 GGCCCACAACAGGATGGCGAG-------------------------------TCCTCCACACAGG i cerAty1.NW_012002954v1 I 259 C 0 s chlSab2.chr28 133670 34 - 21531802 GGCCCACGACAGGATGGCGAG-------------------------------TGCTCCACACAGG i chlSab2.chr28 I 86 I 107 s manLeu1.NW_012101810v1 167527 34 - 2515279 GGCTCACGACAGGATGGCGAG-------------------------------TCCTCCACACAGG i manLeu1.NW_012101810v1 I 218 C 0 s colAng1.NW_012117710v1 326069 34 + 6586416 GGCCCACGACAGGATGACGAG-------------------------------TCCTCGACACAGG i colAng1.NW_012117710v1 I 307 C 0 s otoGar3.GL873611 2265024 14 - 8137123 ---------------------------------------------------CACCTGCACACATG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61052476 33 - 77573801 ---TCATGACAAAATGACAGATG-----------------------------GCCTCCACACACC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=5634.000000 s hg38.chr7_KI270899v1_alt 159212 1 + 190869 T s panTro5.chr7_NW_015973580v1_random 34270 1 - 83720 T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549513 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121042 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179764 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027199 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643149 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4410736 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16998913 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 167561 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326103 1 + 6586416 T i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2265038 1 - 8137123 C i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61052509 1 - 77573801 T i canFam3.chr6 C 0 C 0 e chlSab2.chr28 133704 107 - 21531802 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=911390.000000 s hg38.chr7_KI270899v1_alt 159213 162 + 190869 GGGGTGCCCTAGTTCTGTGCAGGTGCACGTCC---GAGTGTGGCCTCTGAATCAATTCCCTGAATCAGCCCCACAATGGGGATGTCTGTGTAGACACAGCCCCTCGTTCCCAGCCCTACCAGCAACCTGAAAGGAGCCGT------GTTCCTCGAGCC-TATAAAATTAACC- s panTro5.chr7_NW_015973580v1_random 34271 162 - 83720 GGGGTGCCCTAGTTCTGTGCAGGTGCACGTCC---GAGTGTGGCCTCTGAATCAATTCCCTGAATCAGCCCCACAATGGGGATGTCTGTGTAGACACAGCCCCTCGTTCCCAGCCCTACCAGCAACCTGAAAGGAGCCGT------GTTCTTCGAGCC-TATAAAATTAACC- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549514 162 + 162613886 GGGGTGCCCTAGTTCTGTGCAGGTGCACGTCC---GAGTGTGGCCTCTGAATCAATTCCCTGAATCAGCCCCACAATGGGGATGTCTGTGTAGACACAGCCCCTCGTTCCCAGCCCTACCAGCAACCTGAAAGGAGCCGT------GTTCTTCGAGCC-TATAAAATTAACC- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121043 162 - 432965 GGGGTGCCCTAGTTCTGTGCAGGTGCACGTCC---GAGTGTGGCCTCTGAATCAATTCCCTGAATCAACCCCACAATGGGGATGTCTGTGTAGACACAGCCCCTCGTTCCCAGCCCTACCAGCAACCTGAAAGGAGCCTT------GTTCCTCGAGCC-TATAAAATTAACC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179765 161 + 85365473 -GGGTGCCCTAGTTCTGTGCAGATGCACGTCC---CAGTGTGGCCTCCGAATCAATTCCCTGAATCAACCCCACGATGGGGATATCTGTGTAGTCACAGCCCCTCACTCCCAGCCCTACCAGCGACCCGAAAGGAGCCGT------GTTCCTTGCGGC-TATAAAATTAACC- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027200 161 + 185818997 GGGGTGCCCTAGTTCTGTGCAGATCCACGTCC---GAGTGTGGCGTCTGAATCAATTCCCCGAATCAACCCCACAACGGGGGTATCTGTGTAGACACAGCCCCTCTCTCCCAGACCTACCAGGGACCCGAGAGGAGCCGT------GTTCCTCACGGC-TATAAAATTAA-G- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643150 161 + 192294377 GGGGTGCCCTAGTTCTGTGCAGATCCACGTCC---GAGTGTGGCGTCTGAATCAATTCCCCGAATCAACCCCACAACGGGGGTATCTGTGTAGACACAGCCCCTCTCTCCCAGACCTACCAGGGACCCGAGAGGAGCCGT------GTTCCTCACAGC-TATAAAATTAA-G- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4410737 161 - 9440265 GGGGTGCCCTAGTTCTGTGCAGATCCACGTCC---GAGTGTGGCGTCTGAATCAATTCCCCGAATCAACCCCACAACGGGGGTATCTGTGTAGACACAGCCCCTCTCTCCCAGACCTACCAGGGACCCGAGAGGAGCCGT------GTTCCTCACGGC-TATAAAATTAA-G- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16998914 161 - 21915920 GCGGTGCCCTAGTTCTGTGCAGATCCACGTCC---GAGTGTGGCGTCTGAATCAATTCCCCGAATCAACCCCACAACGGGGGTATCTGTGTAGACACAGCCCCTCTCTCCCAGACCTACCAGGGACCTGAGAGGAGCCGT------GTTCCTCACGGC-TATAAAATTAA-G- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 133811 161 - 21531802 GGGGTGCCCTAGTTCTGTGCAGATCCACGTCC---AAGTGTGGCGTCTGAATCAAGTCCCCGAATCAACCCCACAACGGGGGTATCTGTGTAGACACAGCCCCTCGCTCCCAGCCCTACCAGCGACCCGAGAGGAGCCGC------GTTCCTCGCGGC-TGTAACATGAA-G- i chlSab2.chr28 I 107 C 0 s manLeu1.NW_012101810v1 167562 161 - 2515279 GGGGTGCCCTAGTTCTGTGCAGATCCACGTCC---GAGTGTGGCGTCTGAATCAATTCCCCGAATCAACCCCACAACGGGGGTATCTGTGTAGACACAGCCCCTCTCTCCCAGACCTACCAGGGACCCGAGAGGAGCCGT------GTTCCTCACGGC-TATAAAATTAA-G- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326104 161 + 6586416 GGGGTGCCCTAGTTCTGTGCAGATCCACGTCC---GAGTGTGGCGTCTGAATCAAGTCCCCGAATCAACCCCACAACGGGGGTATCTGTGTAGACACAGCCCCTCGCTCCCAGCCCTACCAGGGACCCGACAGGAGCCGT------GTTCCTCGCGGC-TGTAAAATTAA-C- i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2265039 162 - 8137123 CGGGTACCTTGCTTCTGTGCAGATTCACACTCTGGGTGTATGGCCTTTGTCTCACTCTTCTGCAT----------ATGAGGATGTTTCCATAACCCAAACCTCCTACTCCCAGACCTACCAGGGACCTGACAGTATCAGTATCAGAGTTCAACTTGGCTTATTAAACTAATG- i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61052510 137 - 77573801 TGGGAGCCCTGATCCTTTGCAAATGCATGCTT---G---------------------TCTTGTATC--CCTGGTGACAAAGATATTTGTTTCATCA-AACCCCTCATTCTCAG-CCTACTGCTGCTCTGAGAATCTCTTT------GTTTATCTTGGT-AGATAAGCAAA-AC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368089 655 - 2409723 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=154265.000000 s hg38.chr7_KI270899v1_alt 159375 22 + 190869 CCTTCAGCTGGCTGCTTACCCT s panTro5.chr7_NW_015973580v1_random 34433 22 - 83720 CCTTCAGCTGGCTGCTTACCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549676 22 + 162613886 CCTTCAGCTGGCTGCTTACCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121205 22 - 432965 CCTTCAGCTGGCTGCTTACCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179926 22 + 85365473 CCTTCAGCTGGCTGCTTACCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027361 22 + 185818997 CCTCCAGCTGGCTGCTTACCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643311 22 + 192294377 CCTCCAGCTGGCTGCTTACCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4410898 22 - 9440265 CCTCCAGCTGGCTGCTTACCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999075 22 - 21915920 CCTCCAGCTGGCTGCTTACCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 133972 22 - 21531802 CCTCCAGCTGGCTGCTTACCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 167723 22 - 2515279 CCTCCAGGTGGCTGCTTACCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326265 22 + 6586416 CCTCCAGCTGGCTGCTTACCCC i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 368744 22 - 2409723 ccttcAGCCAGCTACTTACCGA i saiBol1.JH378296 I 655 C 0 s otoGar3.GL873611 2265202 22 - 8137123 CTCTCAGAGAGTCATCTACTCC i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61052647 20 - 77573801 CCCTCAGTCGGTCACTGACT-- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531335 504 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=275921.000000 s hg38.chr7_KI270899v1_alt 159397 39 + 190869 ACAGTGTCTC--TGGTGAACCCACAAGGCCCAGCC------CTTCCC------------- s panTro5.chr7_NW_015973580v1_random 34455 29 - 83720 ACAGTGTCTC--TGT----------AGGCCCAGCC------CTTCCC------------- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549698 29 + 162613886 ACAGTGTCTC--TGT----------AGGCCCAGCC------CTTCCC------------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121227 39 - 432965 ACAGTGTCTC--TGGTGAGCCCTCAAGGCCCAGCC------CGTCCC------------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179948 39 + 85365473 ACAGTGTCTC--TGGTGAGCCCACAAGGCCCAGCC------CTTCCC------------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027383 39 + 185818997 ACAGCGTCTC--TGGTGAGCCCATGAGGCCCAGCC------CTTCCC------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643333 39 + 192294377 ACAGCGTCTC--TGGTGAGCCCATAAGGCCCAGCC------CTTCCC------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4410920 39 - 9440265 ACAGCGTCTC--TGGTGAGCCCATGAGGCCCAGCC------CTTCCC------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999097 39 - 21915920 ACAGCGTCTC--TGGTGAGCCCACGAGGCCCAGCC------CTTCCC------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 133994 38 - 21531802 AC-GCGTCTC--TGGTGAGCCCACAAGGCCCAGCC------CTTCCC------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 167745 39 - 2515279 ACAGCGTCTC--TGGTGAGCCCACGAGGCCCAGCC------CTTCCC------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326287 39 + 6586416 GCAGTGTCTC--TGGTGGGCCCACAAGGCCCAGCC------CTTCCC------------- i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 368766 39 - 2409723 ACAGTGTCTC--TGGGGAGCCCCCAACGCCCAGCC------CTTCCC------------- i saiBol1.JH378296 C 0 I 3 s cebCap1.NW_016107703v1 531839 39 - 2125214 ACAGTGTCTC--TGGGGAGCCCACAATGCCCAGCC------CTTCCC------------- i cebCap1.NW_016107703v1 I 504 I 153 s otoGar3.GL873611 2265224 41 - 8137123 ACAGTGTCTCTGTGGTCAGCTCAGAAGGCCCAGCC------CTGACC------------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61052667 55 - 77573801 GCAGTCTCTG--TCT---GCTCAGGAGGTCCAGCCGTAACACTGCCTCCACCTCCACCCC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=412175.000000 s hg38.chr7_KI270899v1_alt 159436 68 + 190869 AACTGGCCAGGACCTGACCCAGGAGC--TGGT--------CTGC-GGGA--AGGCGTGGGCT------------TAGAAGGAAGTGGGGTGTG s panTro5.chr7_NW_015973580v1_random 34484 68 - 83720 AACTGGCCAGGACCTGACCCAGGAGC--TGGT--------CTGC-GGGA--AGGTGTGGGCT------------TAGAAGGAAGTGGGGTGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549727 68 + 162613886 AACTGGCCAGGACCTGACCCAGGAGC--TGGT--------CTGC-GGGA--AGGCGTGGGCT------------TAGAAGGAAGTGGGGTGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121266 68 - 432965 AACTGGCCAGGACCTGACCCAGGAGC--TGGT--------CTGC-GGGA--AGGCGTGGGCT------------TAGAAGGAAGTGGGGTGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 179987 68 + 85365473 AATTGGCCAGGACCTGACCCAGGAGC--TGGA--------CTGT-GGGA--AGGCGTGTGCT------------TGGAAGGAAGTGGGGTGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027422 68 + 185818997 AGCCATCTGGGCCCCGACCCCGGACC--TGGT--------CTGT-GGGA--AGGCGTGGGCT------------TGGAAGGAAGTGGGGTGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643372 68 + 192294377 AGCCATCTGGGCCCCGACCCCGGACC--TGGT--------CTGT-GGGA--AGGCGTGGGCT------------TGGAAGGAAGTGGGGTGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4410959 68 - 9440265 AGCCATCTGGGCCCCGACCCCGGACC--TGGT--------CTGT-GGGA--AGGCGTGGGCT------------TGGAAGGAAGTGGGGTTTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999136 68 - 21915920 AGCCATCTGGGCCCCGACCCCGGACC--TGGT--------CTGT-GGGA--AGGCGTGGGCT------------TGGAAGGAAGTGGGGTGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134032 68 - 21531802 AGCCAGCTGGGCCCCGACCCCGGAGC--TGGC--------CTGT-GGGA--AGGCGTGGGCT------------TGGAAGGAAGTGGGGTGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 167784 68 - 2515279 AGCCATCTAGGCCCCGACCCCAGACC--TGGT--------CTGT-GGGA--AGGCGTGGGCT------------TGGAAGGAAGTGGGGTGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326326 70 + 6586416 AGCCATCTGGGCCCCGACCCCAGAGC--TGGT--------CTGT-GGGAAGAGGCGTGGGCT------------TGGAAGGAAGTGGGGTGTG i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 368808 67 - 2409723 CGCCAGCTGGGCCCCAACCTGGGAGC--TGAT--------CTGT-GGGA--AGGTGTGGGC-------------AGGAAGGAAGTGGGGCGTG i saiBol1.JH378296 I 3 I 77 s otoGar3.GL873611 2265265 82 - 8137123 AACTGGCTAAGTCCTGACCTGGGAGT--TGATGCAGGGGGCTGTCGAGG--AGGTGGGGGCCATCATTACCACACGGGGGGAGGTG------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61052722 61 - 77573801 ACCCCACAGAGCTCTGATCTGGAAGCCATGGT--------CCCC-AGGG--GA---------------------AGGATGGAAGGGCAGTGTG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531878 153 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=193090.000000 s hg38.chr7_KI270899v1_alt 159504 35 + 190869 ----GGGCTCACGGCCCCTTCCTGAGGCTGCAGCTGCCC s panTro5.chr7_NW_015973580v1_random 34552 35 - 83720 ----GGGCTCACGGCCCCTTCCTGAGGCTGCAGCTGCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549795 35 + 162613886 ----GGGCTCACGGCCCCTTCCTGAGGCTGCAGCTGCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121334 35 - 432965 ----GGGCTCACGGCCCCTTCCTGAGGCTGCAGCTGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180055 35 + 85365473 ----GGGCTCACAGCCCTTCCCTGAGGCTGCAGTTGCCC i nomLeu3.chr20 C 0 M 225 s rheMac8.chr3 34027490 35 + 185818997 ----GGGCTCACAGCCCCTTCCTGAGGCTGCAGCTGCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643440 35 + 192294377 ----GGGCTCACAGCCCCTTCCTGAGGCTGCAGCTGCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411027 35 - 9440265 ----GGGCTCACAGCCCCTTCCTGAGGCTGCAGCTGCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999204 35 - 21915920 ----GGGCTCACAGCCCCTTCCTGAGGCTGCGGCTGCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134100 35 - 21531802 ----GGGCTCACAGCCCCTTCCTGAGGCTGCGGCTGCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 167852 35 - 2515279 ----GGGCTCACAGCCCCTTCCTGAGGCTGCGGCTGCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326396 35 + 6586416 ----GGGCTCACAGCCCCTTCCTGAGGCTGCGGCTGCCC i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2265347 22 - 8137123 ----GGGGCCATCATCACCAC--------ACAGC----- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61052783 20 - 77573801 AAAGGAGCT----GTCTCACTCTG--------------- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368875 77 - 2409723 I e cebCap1.NW_016107703v1 531878 153 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I a score=121197.000000 s hg38.chr7_KI270899v1_alt 159539 22 + 190869 TGGGGAGGCCCCTGTGCTGAGA s panTro5.chr7_NW_015973580v1_random 34587 21 - 83720 T-GGGAGGCCCCTGTGCTGAGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549830 21 + 162613886 T-GGGAGGCCCCTGTGCTGAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121369 22 - 432965 TGGGGAGGCCCCTGTGCTGAGA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34027525 22 + 185818997 TGGGGAGGCCCCTGTGCTGAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643475 22 + 192294377 TGGGGAGGCCCCTGTGCTGAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411062 22 - 9440265 TGGGGAGGCCCCTGTGCCGAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999239 22 - 21915920 TGGGGAGGCCCCTGTGCCGAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134135 22 - 21531802 TGGGGAGGCCCCTGTGCCGAGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 167887 22 - 2515279 TGGGGAGGCCCCTGTGCCGAGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326431 22 + 6586416 TGGGGAGGCCCCTGTGCTGAGA i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2265369 18 - 8137123 -GGGGAGG---CTGTGCCAACA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61052803 21 - 77573801 -GGGAGGGGTCTTGTGCTTAGG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e saiBol1.JH378296 368875 77 - 2409723 I e cebCap1.NW_016107703v1 531878 153 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I e nomLeu3.chr20 180090 225 + 85365473 M a score=6166.000000 s hg38.chr7_KI270899v1_alt 159561 4 + 190869 --CATC-- s panTro5.chr7_NW_015973580v1_random 34608 4 - 83720 --CATC-- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549851 4 + 162613886 --CATC-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121391 4 - 432965 --CATC-- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34027547 4 + 185818997 --CGTC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643497 4 + 192294377 --CGTC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411084 4 - 9440265 --CGTC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999261 4 - 21915920 --TGTC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134157 4 - 21531802 --CGTC-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 167909 4 - 2515279 --CGTC-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326453 4 + 6586416 --CGTC-- i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 368952 2 - 2409723 --CG---- i saiBol1.JH378296 I 77 C 0 s otoGar3.GL873611 2265387 4 - 8137123 --AGTC-- i otoGar3.GL873611 C 0 I 6 s canFam3.chr6 61052824 8 - 77573801 AAGGGCTA i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 531878 153 - 2125214 I e calJac3.chrUn_GL286444 53271 1008 + 138751 I e nomLeu3.chr20 180090 225 + 85365473 M a score=969552.000000 s hg38.chr7_KI270899v1_alt 159565 152 + 190869 TTGGAGTGAGGGTGTCCGCTGAGAAG--AGGGCTTAGCCGAGGCCCCTGGGTGGAGGT--TCCTGGTGTTCA------CCCACCC-----TCCCTTCCTCCCGAGACCTGGCCGGCTGGCGTCCCCTTTGGTGCCGGTTGGAGGCTCTGCCTGCAGGCTGGGCTCCT s panTro5.chr7_NW_015973580v1_random 34612 152 - 83720 TTGGAGTGAGGGTGTCTGCTGAGAAG--AGGGCTTAGCCGAGGCCCCTGGGTGGAGGT--TCCTGGTGTTCA------CCCACCC-----TCCCTTCCTCCCGAGACCTGGCCGGCTGGCGTCCCCTTTGGTGTCGGTTGGAGGCTCTGCCCACAGGCTGGGCTCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 549855 152 + 162613886 TTGGAGTGAGGGTGTCCGCTGAGAAG--AGGGCTTAGCCGAGGCCCCTGGGTGGAGGT--TCCTGGTGTTCA------CCCACCC-----TCCCTTCCTCCCAAGACCTGGCCGGCTGGCGTCCCCTTTGGTGTCGGTTGGAGGCTCTGCCCACAGGCTGGGCTCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121395 152 - 432965 TTGGAGTGAGGGTGTCCGCGGAGAAG--AGGGCTTAGCCGAGGCCCCTGGGTGGAGGT--TCCTGGTGTTCA------CCCACCC-----TCCCTTCCTCCCGAGACCTGGCCGGCTGGCGTCCCCTTTGGTGCCGGTTGGAGGCTCTGCCCACAGGCTGGGCTCCT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34027551 150 + 185818997 TTGGAGTGAGGGTGTCCCCTGAGAAG--GGAGCTTAGCCGAGGCACC-GGGTGGAGGT--TCCTGGTGTTCG------CCCACCC-----TGCCTTCCTCCCGAGACCTGGCC-CCTGGCGTCCCCTTTGGTGCTGGCTGGAGGCTCTGCCCGCAGGCTGGTCTCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643501 150 + 192294377 TTGGAGTGAGGGTGTCCCCTGAGAAG--GGAGCTTAGCCGAGGCACC-GGGTGGAGGT--TCCTGGTGTTCG------CCCACCC-----TGCCTTCCTCCCGAGACCTGGCC-CCTGGCGTCCCCTTTGGTGCTGGCTGGAGGCTCTGCCCGCAGGCTGGTCTCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411088 150 - 9440265 TTGGATTGAGGGTGTCCCCTGAGAAG--GGATCTTAGCCGAGGCACC-GGGTGGAGGT--TCCTGGTGTTCG------CCCACCC-----TGCCTTCCTCCCGAGACCTGGCC-CCTGGCGTCCCCTTTGGTGCTGGCTGGAGGCTCTGCCTGCAGGCTGGTCTCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999265 150 - 21915920 TTGGAGTGAGGGTGTCCCCTGAGAAG--GGAGCTTAGCCGAGGCCCC-GGGTGGAGGT--TCCTGGTGTTCG------CCCACCC-----TGCCTTCCTCCCGAGACCTGGCC-CCTGGCGTCCTCTTTGGTGCTGGCTAGAGGCTCTGCCCGCAGGCTGGTCTCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134161 150 - 21531802 TTGGAGTGACGGTGTCCCCTGAGAAG--GGTGCTTAGCCGAGGCCCC-GGGTGGAGGT--TCCTGGTGTTCG------CCCACCC-----TGCCTTCCTCCCGAGACCTGGCC-CCTGGCGTCCCCTTTGGTGCCGGCTGGAGGCTCTGCCCGCAGGCTGGTCTCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 167913 150 - 2515279 TTGGAGTGAGGGTGTCCCCTGAGAAG--GGAGCTTAGCCGAGGCCCC-AGGTGGAGGT--TCCTGGTGTTCA------CCCACCC-----TGCCTTCCTCCCGAGACCTGGCC-CCTGGCGTCCCCTTTGGTGCTGGCTGGAGGCTCTGCCCGCAGGCTGGTCTCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326457 151 + 6586416 GTGGAGTGAGGGCGTCCCCTGAGAAA--GGGGCTTAGCCGAGGCCCCTGGGTGGAGGT--TCCCGGTGTTCA------CCCACCC-----TGCCTTCCTCCCGAGACCTGGCC-CCTGGCGTCCCCTTTGGTGCCGGTTGGAGGCTCTGTCTGCAGGCTAGGCTCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54279 145 + 138751 TTGAAGCAAGGGTGTCCCCTGAGAA---AGGGCTTAGCCAAGGCCCCTGAGTGG-GTT--TCCCAGTGTTCA------CCCA----------CCTCCCTCCTGTGACCTGGCCAGATGGCATCCCCTTTGGTGCTGATAGGAGCCTCTGCTCGCAGGCTGGGAGCCT i calJac3.chrUn_GL286444 I 1008 C 0 s saiBol1.JH378296 368954 145 - 2409723 TTGAAGTGAGGGTGTTCCCTGAGAA---AGGGCTTAGCCAAGGCCCCTAAGTGG-GTT--TCCCAGTGTTCA------CGCA----------CCTCCCTCCTGCGGCCTGGCCGGCTGGCATCCCCTTCGGTGCTGATACGAGCCTCTGCTCACAGGCTGGGAGCCG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 532031 145 - 2125214 TTGAAGTGAGGGTGTCCCCTGAGAA---AGGGCTTAGTCAAGGCCCCTAAGTGG-GTT--TCCCAGTGTTTA------CCCA----------CCTCCCTCCTGCGACGTGGCTGGCTGGCATCCCCTTTGGTGCTGATAGGAGCCTCTGCTCGCAGGCTGGGAGCCT i cebCap1.NW_016107703v1 I 153 C 0 s otoGar3.GL873611 2265397 123 - 8137123 CAAGACTGAGGGTAGCACCTGAGGGGAAGGGGCACAGCAGTGGGCCCTGAGGGGGGGCGGTCCCTGTGTTCA------CCAAACC-----CTCCCTTGTCCCCAG---------GCTG-----------GGTGTCCACGTGAGGCT--------GGGCTGTG----- i otoGar3.GL873611 I 6 C 0 s canFam3.chr6 61052832 123 - 77573801 AGGGAGTAAGGGAGCCTTCTGAGGAGT-GGGTCCTAGT----------------AAAC--CCCCTGTGTTCATAAAACCCCACACTTGGTTGTCTATGTCTTGTGAC-------TGTTGCAT--------ATGCCAGCTTGTGGCTTTGCCTG----------TCCT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e nomLeu3.chr20 180090 225 + 85365473 M a score=55227.000000 s hg38.chr7_KI270899v1_alt 159717 6 + 190869 CCCCAG s panTro5.chr7_NW_015973580v1_random 34764 6 - 83720 CCCCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550007 6 + 162613886 CCCCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121547 6 - 432965 CCCCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180317 6 + 85365473 CCCCAG i nomLeu3.chr20 M 225 C 0 s rheMac8.chr3 34027701 6 + 185818997 CCCCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643651 6 + 192294377 CCCCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411238 6 - 9440265 CCCCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999415 6 - 21915920 CCCCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134311 6 - 21531802 CCCCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168063 6 - 2515279 CCCCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326608 6 + 6586416 CCCCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54424 6 + 138751 CCCCAG i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 369099 6 - 2409723 CCCCAG i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 532176 6 - 2125214 CCCCAG i cebCap1.NW_016107703v1 C 0 I 140 s otoGar3.GL873611 2265520 6 - 8137123 TCACTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61052955 2 - 77573801 -CT--- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=13477.000000 s hg38.chr7_KI270899v1_alt 159723 2 + 190869 TG s panTro5.chr7_NW_015973580v1_random 34770 2 - 83720 TG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550013 2 + 162613886 TG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121553 2 - 432965 TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180323 2 + 85365473 TG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027707 2 + 185818997 TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643657 2 + 192294377 TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411244 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999421 2 - 21915920 TG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134317 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168069 2 - 2515279 TG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326614 2 + 6586416 TG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54431 2 + 138751 CA i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 369106 2 - 2409723 CA i saiBol1.JH378296 I 1 C 0 s otoGar3.GL873611 2265526 2 - 8137123 TG i otoGar3.GL873611 C 0 I 17 e canFam3.chr6 61052957 0 - 77573801 C e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 532182 140 - 2125214 I a score=291888.000000 s hg38.chr7_KI270899v1_alt 159725 50 + 190869 GGAGCTGGTGTTCCTGGTATCACAAGAGCGTCTCCTGCTTCCTCTTCTTG s panTro5.chr7_NW_015973580v1_random 34772 50 - 83720 GGAGCTGGTGTTCCTGGTATCACATGAGCGTCTCCTGCTTCCTCTTCTTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550015 50 + 162613886 GGAGCTGGTGTTCCTGGTATCACATGAGCGTCTCCTGCTTCCTCTTCTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121555 50 - 432965 GGAGCTGGTGTTCCTGGTATCACATGAGCGTCTCCTGCTTCCTCGTCTTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180325 50 + 85365473 GAAGCTTGTGTTCCTGGCATCACATCAGCGTCCCCTTCTTCCTCTTCTTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027709 50 + 185818997 GGAGCTGGTGTTCCCGGCATCCCATCAGCTTCCCCTTCTTCCTCTTTTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643659 50 + 192294377 GGAGCTGGTGTTCCCGGCATCCCATCAGCTTCCCCTTCTTCCTCTTTTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411246 50 - 9440265 GGAGCTGGTGTTCCCGGCATCCCATCAGCTTCCCCTTCTTCCTCTTTTTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999423 50 - 21915920 GGAGCTGGTGTTCCCGGCATCCCATCAGCTTCCCCTTCTTCCTCTTTTTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134319 50 - 21531802 GGAGCTGGTGCTCCCGGCATCCCATCAGCTTCCCCTTCTTCCTGTTTTCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168071 50 - 2515279 GGAGCTGGTGTTCCCGGCATCCCATCAGCTTCCCCTTCTTCCTCTTTTTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326616 50 + 6586416 GGAGCTGGTGTTCCCAGGACCCCATCAGCTTCCCCTTCTTCCTGTTTTTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54433 50 + 138751 GGGGCTGGTGTGTCCACCATCCCATCAGCTTCCCCTTCTCCCCTTTCTTT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 369108 49 - 2409723 GGAGCTGGTGTGTCCACCACCCTGTCAGCTTCCCCTTCT-CCCTGTCTTT i saiBol1.JH378296 C 0 C 0 s canFam3.chr6 61052957 13 - 77573801 ------------------GCCCCACTAGAGC------------------- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2265528 17 - 8137123 I e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 532182 140 - 2125214 I a score=631119.000000 s hg38.chr7_KI270899v1_alt 159775 89 + 190869 CACAGGCAGGACCGTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCAGCT--CCCCCAGAAGTTGCCCCCTAATCACCCCTTCCAAGGACA------ s panTro5.chr7_NW_015973580v1_random 34822 89 - 83720 CACAGGCAGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCAGCT--CCCCCAGAAGTTGTCCCCTAACCACCCCTTCCAAGGACA------ i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550065 89 + 162613886 CACAGGCAGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCAGCT--CCCCCAGAAGTTGTCCCCTAACCACTCCTTCCAAGGACA------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121605 88 - 432965 CACAGGCAGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCA-TT--CCCCCAGAAGTTGTCCCCTAACCACCCCTTCCAACGACA------ i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180375 71 + 85365473 TGCAGGCAGGACCCTCAGGCCAGCCCCAGA--G-----CCCTTTTCTTCTCCCAGCT--CCCCCCGAAGTTGTCCCCTAG------------------------ i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027759 89 + 185818997 TACAGGCAGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCAGCT--GCCCCAGAAGTTGTTCCCTAACCTTCCCTTCCAAGGACA------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643709 89 + 192294377 TACAGGCAGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCAGCT--GCCCCAGAAGTTGTTCCCCAACCTTCCCTTCCAAGGACA------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411296 89 - 9440265 TACAGGCAGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCAGCT--GCCCCAGAAGTTGTTCCCTAACCTTCCCTTCCAAGGACA------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999473 89 - 21915920 TACAGGCAGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCAGCT--GCCCCAGAAGTTGTTCCCTAACCTTCCCTTCCAAGGACA------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134369 89 - 21531802 TGCAGGCAGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTGCTTCTCCCAGCT--CCCCCAGAAGTTGTTCCGTAACCTTCCCTTCCAAGGACA------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168121 89 - 2515279 TACAGGCAGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCATCT--GCCCCAGAAGTTGTTCCCTAACCTTCCCTTCCAAGGACA------ i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326666 89 + 6586416 TGCAGGCGGGACCCTCAGGCCAGCCTCAGA--G-----CCCTTTTCTTCTCCCAGCT--CCCCCAGAAGTTGTTCCCTAACCTTCCCTTCCAAGGACA------ i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54483 85 + 138751 TGCAGGCAGAAGCCTCAGGTCAGCCTCAGA--A-----CCCTTTTCTTCTCCCAGCT---CCTCAGAGGT---CCCCTAGCCTTCACTGTCAGGGGTG------ i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 369157 85 - 2409723 TGCAGGCAGAAGCCTCAGGCCGGCCCCAGA--A-----CCCTTTTCTCCTCCCAGCT---CCCCAGAAGT---CCCCTCGCCTTCCCCTTCAGGGGTG------ i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2265545 87 - 8137123 CACAGGTAGG--TTTCAGGCCAA-CTCAGAGTG-----TCCTTTTCTTCTCCTAGCC---CCCCACAAGGCACCCCTCAAGCTTCCCCATGAGTTACA------ i otoGar3.GL873611 I 17 C 0 s canFam3.chr6 61052970 97 - 77573801 CACATGCAGGAGATGCTGGTCAACCTTCAT--GGGCTTCCTCTTTCTTCTCCTGGGTTGTCCCCAGA-----CTCCCTGATTTTGCCACTCCTTGGCAGAGCCA i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I e cebCap1.NW_016107703v1 532182 140 - 2125214 I a score=341824.000000 s hg38.chr7_KI270899v1_alt 159864 47 + 190869 TTTCCCTTATTTTCCA-----CTCAAGACAGCGCGAGGCCATCCCTCCTGCC s panTro5.chr7_NW_015973580v1_random 34911 47 - 83720 TTTCCCTTATTTTCCA-----CTCAAGACAGCGCGAGGCCATCCCTCCTGCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550154 47 + 162613886 TTTCCCTTATTTTCCA-----CTCAAGACAGCGCGAGGCCATCCCTCCTGCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121693 47 - 432965 TTTCCCTTATTTACCA-----CTCAAGACAGCGCGAGGTCAGCCCTCCTGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180446 10 + 85365473 ------------------------------------------CCCTCCTGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027848 47 + 185818997 TTTCCCTTCTTTTCCA-----CTCAAGACAGCGCGAGGCCAGCCCTCCTGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643798 47 + 192294377 TTTCCCTTCTTTTCCA-----CTCAAGACAGCGCGAGGCCAGCCCTCCTGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411385 47 - 9440265 TTTCCCTTCTTTTCCA-----CTCAAGACAGCGCGAGGCCAGCCCTCCTGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999562 47 - 21915920 TTTCCCTTCTTTTCCA-----CTCAAGACAGCGCGAGGCCAGCCCTCCTGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134458 47 - 21531802 TTTCCCTTCTTTCCCA-----CTCAAGACAGCGCGAGGCCAGCCCTCCTGTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168210 47 - 2515279 TTTCCCTTCTTTTCCA-----TTCAAGACAGCGCGAGGCCAGCCCTCCTGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326755 44 + 6586416 CTTCCCTTCTTTTCCA-----CTCAAAACAGCGCAAGGCCAGCCCTCCT--- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54568 44 + 138751 TTTCCCT---TTTCCA-----CTCAAGACAGGATGAGACCAGCTCTCCTGCC i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 369242 47 - 2409723 TTTCCTTTCGTTTCCA-----CTCAAGGCAGGGTGAGACCAGCTCTCCTGCC i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 532322 47 - 2125214 TTTCCCTTCTTTTCCA-----TTCAAGACAGGGTGAGACCAGCTCCCCTGCC i cebCap1.NW_016107703v1 I 140 I 2 s otoGar3.GL873611 2265632 51 - 8137123 TCTTCCCTCCCTTCCAGGGCTCTCAGGACAGTG-GAGGCTACCCTTCTTGCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61053067 30 - 77573801 ----------------------TTAAGACAGTGTGAGACCACCCTGCCTGCC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116259 79 + 376347 I a score=417659.000000 s hg38.chr7_KI270899v1_alt 159911 59 + 190869 CCCGTGTCAGAGC-CCCCGAGGC---CCCCAAGG-CAGACACGAAGCTCAT--------------CCCGAGA----GGGACC- s panTro5.chr7_NW_015973580v1_random 34958 59 - 83720 CCTGTGTCAGAGC-CCCCGAGGC---CCCCAAGG-CAGACACGAAGCTCAT--------------CCCGAGA----GGGACC- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550201 59 + 162613886 CCTGTGTCAGAGC-CCCCGAGGC---CCCCAAGG-CAGACACGAAGCTCAT--------------CCCGAGA----GGGACC- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121740 59 - 432965 CCCGTGTCAGAGC-CCCCGAGGC---CCCCAAGG-CAGACATGAAGCTCAT--------------CCTGAGA----GGGACC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180456 58 + 85365473 CCCGTGTCAGAGC-CCCCGA-GC---CCCCAAGG-CAGATAGGAAGCTCAT--------------CCCGAGA----GGGACC- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027895 55 + 185818997 CCTGCGTCAGAG---CCCGAGG-----CCCAAGG-CAGACGCGAAGCTCAT--------------CACGGGA----GGGAGC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643845 55 + 192294377 CCTGCGTCAGAG---CCCGAGG-----CCCAAGG-CAGACGCGAAGCTCAT--------------CACGGGA----GGGACC- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411432 55 - 9440265 CCTGCGTCAGAG---CCCGAGG-----CCCAAGG-CAGACGCGAAGCTCAT--------------CACGGGA----GGGACC- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999609 55 - 21915920 CCCGCGTCAGAG---CCCGAGG-----CCCAAGA-CAGACGCGAAGCTCAT--------------CACGGGA----GGGACC- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134505 57 - 21531802 CTCGTGTCAGAG---CCCGAGGC---CCCCAGGG-CAGACGCGAAGCTCAT--------------CACGGGA----GGGACC- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168257 55 - 2515279 CCCGCGTCAGAG---CCCGAGG-----CCCAAGG-CAGACGCGAAGCTCAT--------------CACGGGA----GGGACC- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326799 54 + 6586416 -----GTCAGAGC-CCCCGAGGC---CCCCAAGG-CAGACGCGAAGCTCAT--------------CAcgggg----ggcacc- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54613 56 + 138751 ---GTCTCAGAGC-CCCCAGGGC---TCCCAAGG-CAGACTTGAAGCTCAT--------------CACCAGA----GGGACC- i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 369290 56 - 2409723 ---GTCTCAGAGC-CCCCGAGGC---TCCCAAGG-CAGACTTGAAGCTCAT--------------CACCAGA----GGGACT- i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 532371 59 - 2125214 TCTGTCTCAGAGC-CCCCAAGGC---TCCCAAGG-CAGACTTGAAGCTCAT--------------CACCAGA----GGGACC- i cebCap1.NW_016107703v1 I 2 C 0 s aotNan1.NW_018514293v1 116338 59 + 376347 CCCGTCTCAGAGC-CCCCAAGGC---TCCCACGG-CAGACTTGAAGCTCAT--------------CACCAGA----GGGACC- i aotNan1.NW_018514293v1 I 79 I 59 s otoGar3.GL873611 2265683 58 - 8137123 -CTGCCTCAGAGAGCTCCAAGGT---CCCCATGGACATGCCTCAAGTGGGC----------------TGAGA----GGGGCC- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61053097 79 - 77573801 --AATCTCAGAGC-ATCTGAGGAAGGCCAAGAGG-CAGACTTGAGGCTCTTGCCTGTGGCCCAGCCCAGAGACTACGGGGTCT i canFam3.chr6 C 0 C 0 a score=12366.000000 s hg38.chr7_KI270899v1_alt 159970 2 + 190869 TC- s panTro5.chr7_NW_015973580v1_random 35017 2 - 83720 TC- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550260 2 + 162613886 TC- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121799 2 - 432965 TC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180514 2 + 85365473 TC- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34027950 2 + 185818997 TC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643900 2 + 192294377 TC- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411487 2 - 9440265 TC- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999664 2 - 21915920 TC- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134562 2 - 21531802 TC- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168312 2 - 2515279 TC- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326853 2 + 6586416 tc- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54669 2 + 138751 TC- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 369346 2 - 2409723 GC- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 532430 2 - 2125214 TC- i cebCap1.NW_016107703v1 C 0 I 60 s otoGar3.GL873611 2265741 2 - 8137123 CC- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61053176 2 - 77573801 -CT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116397 59 + 376347 I a score=72033.000000 s hg38.chr7_KI270899v1_alt 159972 14 + 190869 GTGA-GGGCTGCGGT s panTro5.chr7_NW_015973580v1_random 35019 14 - 83720 GTGA-GGGCTGCAGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550262 14 + 162613886 GTGA-GGGCTGCGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121801 14 - 432965 ATGA-GGGCTGCGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180516 14 + 85365473 GTGA-GGGCTGTGCT i nomLeu3.chr20 C 0 I 43 s rheMac8.chr3 34027952 14 + 185818997 GCGG-GGGCTGTGGC i rheMac8.chr3 C 0 I 43 s macFas5.chr3 33643902 14 + 192294377 GCGG-GGGCTGCGGC i macFas5.chr3 C 0 I 43 s macNem1.NW_012019910v1 4411489 14 - 9440265 GCGG-GGGCTGCGGC i macNem1.NW_012019910v1 C 0 I 43 s cerAty1.NW_012002954v1 16999666 14 - 21915920 GCGG-GGGCTGCGGC i cerAty1.NW_012002954v1 C 0 I 43 s chlSab2.chr28 134564 14 - 21531802 gcgg-gggctgcggc i chlSab2.chr28 C 0 I 43 s manLeu1.NW_012101810v1 168314 14 - 2515279 GCAG-GGGCTGCGGC i manLeu1.NW_012101810v1 C 0 I 43 s colAng1.NW_012117710v1 326855 14 + 6586416 gcgg-gggctgcggt i colAng1.NW_012117710v1 C 0 I 43 s calJac3.chrUn_GL286444 54671 13 + 138751 -AGG-GGGCTGCAGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 369348 12 - 2409723 --GG-GGGCCCCAGG i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2265743 9 - 8137123 ------TGCCCCAGG i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61053178 15 - 77573801 ATGACAGGCCGAGGT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 116397 59 + 376347 I e cebCap1.NW_016107703v1 532432 60 - 2125214 I a score=29744.000000 s hg38.chr7_KI270899v1_alt 159986 3 + 190869 -GGC s panTro5.chr7_NW_015973580v1_random 35033 3 - 83720 -GGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550276 3 + 162613886 -GGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121815 3 - 432965 -GGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180573 3 + 85365473 -GGC i nomLeu3.chr20 I 43 C 0 s rheMac8.chr3 34028009 3 + 185818997 -GGC i rheMac8.chr3 I 43 C 0 s macFas5.chr3 33643959 3 + 192294377 -GGC i macFas5.chr3 I 43 C 0 s macNem1.NW_012019910v1 4411546 3 - 9440265 -GGC i macNem1.NW_012019910v1 I 43 C 0 s cerAty1.NW_012002954v1 16999723 3 - 21915920 -GGC i cerAty1.NW_012002954v1 I 43 C 0 s chlSab2.chr28 134621 3 - 21531802 -GGC i chlSab2.chr28 I 43 C 0 s manLeu1.NW_012101810v1 168371 3 - 2515279 -GGC i manLeu1.NW_012101810v1 I 43 C 0 s colAng1.NW_012117710v1 326912 3 + 6586416 -GGC i colAng1.NW_012117710v1 I 43 C 0 s calJac3.chrUn_GL286444 54684 3 + 138751 -GGC i calJac3.chrUn_GL286444 C 0 I 44 s saiBol1.JH378296 369360 3 - 2409723 -GGC i saiBol1.JH378296 C 0 I 44 s aotNan1.NW_018514293v1 116456 3 + 376347 -GGC i aotNan1.NW_018514293v1 I 59 C 0 s otoGar3.GL873611 2265753 2 - 8137123 -GG- i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61053193 4 - 77573801 AAGC i canFam3.chr6 C 0 C 0 e cebCap1.NW_016107703v1 532432 60 - 2125214 I a score=141320.000000 s hg38.chr7_KI270899v1_alt 159989 16 + 190869 -CCAGC------------------------------------------GGGAGGTGCTG s panTro5.chr7_NW_015973580v1_random 35036 16 - 83720 -CCAGC------------------------------------------GGGAGGTGCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550279 16 + 162613886 -CCAGC------------------------------------------GGGAGGTGCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121818 16 - 432965 -CCAGC------------------------------------------AGGAGGTGCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180576 16 + 85365473 -CCAGC------------------------------------------GGGAGGTGCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028012 16 + 185818997 -CCAGC------------------------------------------GGCAGGTGCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643962 16 + 192294377 -CCAGC------------------------------------------GGCAGGTGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411549 16 - 9440265 -CCAGC------------------------------------------GGCAGGTGCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999726 16 - 21915920 -CCAGC------------------------------------------GGCAGGTGCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134624 16 - 21531802 -CCAGC------------------------------------------AGCAGGTGCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168374 16 - 2515279 -CCAGC------------------------------------------GGCAGGTGCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326915 16 + 6586416 -CCAGC------------------------------------------GGCAGGTGCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54731 16 + 138751 -CCAGC------------------------------------------AGGAAGTACTG i calJac3.chrUn_GL286444 I 44 C 0 s saiBol1.JH378296 369407 16 - 2409723 -CCAGC------------------------------------------GGGAGGCGCTG i saiBol1.JH378296 I 44 C 0 s cebCap1.NW_016107703v1 532492 16 - 2125214 -CCAGC------------------------------------------GGGAGGCGCTG i cebCap1.NW_016107703v1 I 60 C 0 s aotNan1.NW_018514293v1 116459 16 + 376347 -CCAGC------------------------------------------GGGAGGTGCTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2265755 11 - 8137123 -CAGGT------------------------------------------GGGAGG----- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61053197 59 - 77573801 CCGGGCTCTGGAACATGGGATGAATGGTGCTCggtggtagtggtggtggggaggtggtg i canFam3.chr6 C 0 I 61 a score=172378.000000 s hg38.chr7_KI270899v1_alt 160005 20 + 190869 CGTCCTGACCACACA-CATCA s panTro5.chr7_NW_015973580v1_random 35052 20 - 83720 CGTCCTGACCACACA-CGTCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550295 20 + 162613886 CGTCCTGACCACACA-CGTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121834 20 - 432965 CGTCCTGACCACACA-CGTCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180592 20 + 85365473 TGTCCTGACCACACA-CGTCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028028 20 + 185818997 CATCGTGACCACACA-CGTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643978 20 + 192294377 CATCGTGACCACACA-CGTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411565 20 - 9440265 CATTGTGACCACACA-CGTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999742 20 - 21915920 CATCGTGACCACACA-CGTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134640 20 - 21531802 CATCGTGACCACGCA-CGTCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168390 20 - 2515279 CATCGTGACCACACA-CGTCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326931 20 + 6586416 CGTCGTGACCACGCA-CGTCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54747 18 + 138751 CGTTGTGACCACACA---TCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 369423 20 - 2409723 CGTCGTGACCACACA-TGTCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 532508 20 - 2125214 CGTCGTGACCACACA-TGTCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 116475 20 + 376347 CGTCGTGACCACGCA-TGTCA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2265766 21 - 8137123 AAGCCAGAGAACAGGTTGGCC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61053256 61 - 77573801 I a score=407564.000000 s hg38.chr7_KI270899v1_alt 160025 41 + 190869 CAAGCTCCAAGTCAGC-ACCTGTGTGAGGAACAGGCTCTAT----------------T s panTro5.chr7_NW_015973580v1_random 35072 41 - 83720 CAAGCTCCAAGTCAGC-ACCTGTGTGAGGAAAAGGCTCTAT----------------T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550315 41 + 162613886 CAAGCTCCAAGTCAGC-ACCTGTGTGAGGAAAAGGCTCTAT----------------T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121854 41 - 432965 CAAGCTCCAAGGCAGC-ACCTGTGTGAGGAACGGGCTCTAT----------------T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180612 41 + 85365473 CAAGCTCCAAGTCAGC-ACCTGTGTAAGGAACAGGCTGTAT----------------T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028048 57 + 185818997 CAGGGTCCAAGTCAGC-ACCTGTGTGAGGAACAGGCTCTCTGTTTGTTCAGTCGCTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33643998 57 + 192294377 CAGGGTCCAAGTCAGC-ACCTGTGTGAGGAACAGGCTCTCTGTTTGTTCAGTCGCTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411585 57 - 9440265 CAGGGTCCAAGTCAGC-ACCTGTGTGAGGAACAGGCTCTCTGTTTGTTCAGTCGCTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999762 57 - 21915920 CAGGGTCCAAGTCAGC-ACCTGTGTGAGGAACAGGCTCTCTGTTTGTTCAGTCGCTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134660 57 - 21531802 CAAGGTCCAAGTCAGC-ACCTGTGTGAGGAGCAGGCTCCGTGTTGGTTCGGTCGCTGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168410 57 - 2515279 CAGGGTCCAAGTCAGC-ACCTGTGTGAGGAACAGGCTCTCTGTTTGTTCAGTCGCTGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 326951 57 + 6586416 CAAGGTCCAAGTCAGC-ACCTGTGTGAGGAACAGGCTCTCTGTTTGTTCGGTTGCTGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54765 41 + 138751 CAAGTTCCGAATCAGC-ACCTGTGTGAGGAACAGGCTCTAT----------------T i calJac3.chrUn_GL286444 C 0 I 16 s saiBol1.JH378296 369443 41 - 2409723 CAAGTTCCGAATCAGC-ACCTGTGTGAGGAACAGGCTCTAT----------------T i saiBol1.JH378296 C 0 I 16 s cebCap1.NW_016107703v1 532528 41 - 2125214 CAAATTCCGAATCAGC-ACCTGTGTGAGGAACAGGCTCTAT----------------T i cebCap1.NW_016107703v1 C 0 I 87 s aotNan1.NW_018514293v1 116495 41 + 376347 CAAGTTCCGAATCAGC-ACCTGCGTGAGGAACAGGCTCTAT----------------T i aotNan1.NW_018514293v1 C 0 I 87 s otoGar3.GL873611 2265787 42 - 8137123 CAGGGACCCTGTAAGCTACCTGTGTGGGAAACAGGCTCTAT----------------T i otoGar3.GL873611 C 0 I 17 s canFam3.chr6 61053317 40 - 77573801 CACATCCCCAATAAGC-ACCCA-GTGGGAAAGAACCTCTGT----------------T i canFam3.chr6 I 61 I 22 a score=441176.000000 s hg38.chr7_KI270899v1_alt 160066 70 + 190869 CACGTCTCTCAACGT---GGAGAATGAGCTT-CTACC------GTGCTAGGAG-CTTCCTTGCCTGCTGTGCACTTTCGTC s panTro5.chr7_NW_015973580v1_random 35113 70 - 83720 CACGTCTCGCAACGT---GGAGAATGAGCTT-CTACG------GTGCTAGGAG-CTTCCTTGCCCGCTGTGCACTTTCGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550356 70 + 162613886 CACGTCTCGCAACGT---GGAGAATGAGCTT-CTACG------GTGCTAGGAG-CTTCCTTGCCCGCTGTGCACTTTCGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121895 70 - 432965 CACGTCTCACAACGT---GGAGAATGAGCTT-CTACG------GTGCTAGGAG-CTTCCTTGCCCGCTGTGCACTTTCGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180653 71 + 85365473 CACATCTCACAACGT---GGAGAATGAGCTTCCTACG------GTGCTAGGAG-CTTCCTTGCCCACTGTGCACTTTCGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028105 72 + 185818997 CAGGTCTCACGACGT--GGGGGAATGAGCTTCCTGTG------AGGCTGGGAG-CTTCCTCACCAGCTGTGCACTTCCGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33644055 72 + 192294377 CAGGTCTCACGACGT--GGGGGAATGAGCTTCCTGTG------AGGCTGGGAG-CTTCCTCACCAGCTGTGCACTTCCGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411642 72 - 9440265 CACGTCTCACGACGT--GGGGGAATGAGCTTCCTGTG------AGGCTGGGAG-CTTCCTCACCAGCTGTGCACTTCCGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999819 71 - 21915920 CACGTCTCACGACGT---GGGGAATGAGCTTCCTGTG------AGGCTGGGAG-CTTCCTCACCAGCCGTGCACTTCCATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134717 70 - 21531802 CACGTCTCACGACGT---GGGGAATGAGCTTCCTGTG------AGGCT-GGAG-CTTCCTCACCAGCCGTGCATTTCCGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168467 71 - 2515279 CACGTCTCACGACGT---GGGGAATGAGCTTCCTATG------AGGCTGGGAG-CTTCCTCACCAGCCGTGCACTTCCGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 327008 71 + 6586416 CCCGTCTCACGACGT---GGGGAATGGGCTTCCTGTG------ACACTGGGAG-CTTCCTCCCCAGCCGTGCACTTCCGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54822 71 + 138751 AACATCTCACAGCTT---GGGAAACAAGCTTCTTATG------GTGGTAGGAA-CTTCCCCACCAGGCACGCGAGTTCATG i calJac3.chrUn_GL286444 I 16 C 0 s saiBol1.JH378296 369500 71 - 2409723 AACGTCTCACAGCTT---GGAAATCGAGCTTCCTGTG------GTGCTAGGAA-CTTCCCCACCAGGCACGCACATTCATG i saiBol1.JH378296 I 16 C 0 s otoGar3.GL873611 2265846 72 - 8137123 AATATCTCACAATTT---ACAAAATGAGCTTCCTCTG------GTGCTAACAACCTTTCCTACCAGGCTTGCACTTTCAGT i otoGar3.GL873611 I 17 I 1 s canFam3.chr6 61053379 80 - 77573801 CATGTCTTACAATTTTTTAAAAAATGAGCTTCTCATGGCACCAGCGCCAGCCA-TCTTCCCCCTGGACATGCACTTTCTTT i canFam3.chr6 I 22 C 0 e aotNan1.NW_018514293v1 116536 87 + 376347 I e cebCap1.NW_016107703v1 532569 87 - 2125214 I a score=3833446.000000 s hg38.chr7_KI270899v1_alt 160136 460 + 190869 TGATCAGCAGCCAGATGCTTTTACAGTGTTCCCACA---AGGACAGCGAGCACCAGGA-CCCCACCTCTC-GATTGTATTGTGTCCAGTTCT--AC-TGCGACTCCAGGATAGCCCCTGAGAAAGGAGAACACAAACACACAGAAAGGGAACATCAGCTCTGCCCTCC---CTGAGCGC-CTTGTCTAAGTCTGAGGGTGGTGCCACCTCTGATGGATGCTGAGGTATGGAGCCTCTGTCATCTATGACCAGACATATGGGG------CAGGCAGAGATACACAAA-------------------------------GGCCTGC---AATGGGAGCAAACACAGGCT--CTGCACAGG-AGCCTCCGGTGGCCTCGGGGCCAAACGTCACTGTGTCCAGCGGGt--gggggagct-ccaggctgccggcagccggccgtcctacacgtcaggctagaggagcacccgtggc-ttctctggctgggcctgaggtgggagtgatgtggggagggtggtggt s panTro5.chr7_NW_015973580v1_random 35183 460 - 83720 TGATCAGCAGCCAGATGCTTTTACAGTGTCCCCACA---AGGACAGCAAGCACCAGGA-CCCCACCTCTC-GACTGTATTGTGTCCAGTTCT--AC-TGCGACTCCAGGATAGCCCCTGAGAAAGGAGAACACAAACGCACAGAAAGGGAACATCAGCTCTGCCCTCC---CTGAGCGC-CTTGTCTAAGTCTGAGGGTGGTGCCACCTCTGATGGATGCTGATGTATGGAGTCTCTGTCATCTATGACCAGACATACGGGG------CAGGCAGAGATACACAAA-------------------------------GGCCTGC---AATGGGAGCAAACACAGGCT--CTGCACAGG-AGCGTCCGGTGGCCTCGGGGCCGAACGTCACTGTGTCCAGCGGGt--gggggagct-ccaggctgccggcagccggccgtcctacacgtcaggctagaggagcacccgtggc-ttctctggctgggcctgaggtgggagtgatgtggggagggtggtggt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550426 460 + 162613886 TGATCAGCAGCCAGATGCTTTTACAGTGTCCCCACA---AGGACAGCAAGCACCAGGA-CCCCACCTCTC-GACTGTATTGTGTCCAGTTCT--AC-TGCGACTCCAGGATAGCCCCTGAGAAAGGAGAACACAAACGCACAGAAAGGGAACATCAGCTCTGCCCTCC---CTGAGCGC-CTTGTCTAAGTCTGAGGGTGGTGCCACCACTGATGGATGCTGATGTATGGAGTCTCTGTCATCTATGACCAGACATACGGGG------CAGGCAGAGATACACAAA-------------------------------GGCCTGC---AATGGGAGCAAACACAGGCT--CTGCACAGG-AGCGTCCGGTGGCCTCGGGGCCGAACGTCACTGTGTCCAGCGGGt--gggggagct-ccaggctgccggcagccggccgtcctacacgtcaggctagaggagcacccgtggc-ttctctggctgggcctgaggtgggagtgatgtggggagggtggtggt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 121965 460 - 432965 TGATCAGCAGCCAGATGCTTTTACAGTGTCCCCACA---AGGACAGCGAGCACCAGGA-CCCCACCTCTA-GATTGTATTGTGTCCAGTTCT--AC-TGCGACTCCAGGATAGCCCCTGAGAAAGGAGAACACAAATGCACAGAAAGGGAACAACAGCTCTGCCCTCC---CTGAGCGC-CTCGTCTAAGTCTGAGGGTGGTGCCACCTCTGATGGATGCTGATGTATGGAGTCTCTGTCATCTATGACCAGACATACGGGG------CAGGCAGAGATACACAAA-------------------------------GGCCTGC---AATGGGAGCAAACACAGGCT--CTGCACAGG-AGCCTCTGGTGGCCTCGGGGCCGAACGTCACTGTGTCCAGCGGGt--gggggagct-ccaggctgccggcagccggccgtcctacacgtcagcctagaggagcacacgtggc-ttctctggctgggcctgaggtgggagtgatgtggggagggtggtggt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 180724 443 + 85365473 TGATCAGCAGCCAGATGCTTTTACAGTGTCCCCACA---AGGACAGCGAGCTCCAGGA--CCCACCTCTC-GATTGTATTGTGTCCAGTTCT--AC-TGCGACTCCAGGATAGCCCCTGAGAAAGGAGAACACAAACAAACAGAAAGGGAACATCAGCTCTGCCCTCC---CTGAGCAC-GTCGTCTAAGTCTGAGGGTGGTGCCTCCTCTGAT----------GTATGGAGTCTCTGTCATCTGTGACCAGCTGTATGGGG------CACGCAGAGATACACAAA-------------------------------GGCCTGC---AATGGGGGCAAACACAGGCT--CTGCACAGG-AGCCTCTGGTGGCCTCAGGGCAGAACGTCACTGTGTCCAG-GGGT--GCGGGAGCT-CCAGGCTGCCGGCAGCCGGCCGTCCTACACGTCAGGCTAGAGGAGC-----CAGC-TTCTCTGGCTGAGCCTGAGGTGGGAGTGATGTGGGGAGGGTGGTGGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028177 442 + 185818997 TGATCGGCAGCCAGATGC-TTCACAGTGTCCCCACC---AGGACATTGAGCCCAAGGA-CCCCACCTCTC-GATTGTACTGTGTCCAGGTCT--AC-GGCGACTCCAGGACAGCCCCTGAGAAAGGAGAACACAAGCAAACAGAAAGGGAGCCTCGGCTCTGCCCTCC---CTGAGCGC-CTCGTCTAAGTCTGAGGGTGGTGCCGCCTCTGAA----------GTATGGAGTCTCCGTCATCTATGACCAGACCCACGGGG------CACACGGAGACACACAGA-------------------------------GGCCTGT---GATGGGAACAAACGCAGGCT-------CAGG-AGCCGCTGGTGGCCTCGGGGCGGCACGTCACTGTGTCCAGTGGGT--GGGGG--CT-CCAGGCTGCCGGCAGCAGGCTGTCCTACACGTCAGGCTGGAGGAGCGTCCGTGGC-TTCTCTGGCGGGGCCTGAGGTGGGAGTGATGCGGGGAGGGTGGTGGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33644127 442 + 192294377 TGATCGGCAGCCAGATGC-TTCACAGTGTCCCCACC---AGGACATTGAGCCCAAGGA-CCCCACCTCTC-GATTGTACTGTGTCCAGGTCT--AC-GGCGACTCCAGGACAGCCCCTGAGAAAGGAGAACACAAGCAAACAGAAAGGGAGCCTCGGCTCTGCCCTCC---CTGAGCGC-CTCGTCTAAGTCTGAGGGTGGTGCCGCCTCTGAC----------GTATGGAGTCTCCGTCATCTATGACCAGACCCACGGGG------CACACGGAGACACACAGA-------------------------------GGCCTGT---GATGGGAACAAATGCAGGCT-------CAGG-AGCCGCTGGTGGCCTCGGGGCGGCACGTCACTGTGTCCAGTGGGT--GGGGG--CT-CCAGGCTGCCGGCAGCAGGCTGTCCTACACGTCAGGCTGGAGGAGCGTCCGTGGC-TTCTCTGGCGGGCCCTGAGGTGGGAGTGATGCGGGGAGGGTGGTGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4411714 442 - 9440265 TGATCGGCAGCCAGATGC-TTCACAGTGTCCCCACC---AGGACATCGAGCCCAAGGA-CCCCACCTCTC-GATTGTACTGTGTCCAGGTCT--AC-GGCGACTCCAGGACAGCCCCTGAGAAAGGAGAACACAAGCAAACAGAAAGGGAGCCTCGGCTCTGCCCTCC---CTGAGCGC-CTCGTCTAAGTCTGAGGGTGGTGCCGCCTCTGAC----------GTATGGAGTCTCCGTCATCTATGACCAGACCCACGGGG------CACACGGAGACACACAGA-------------------------------GGCCTGT---GATGGGAACAAACGCAGGCT-------CAGG-AGCCGCTGGTGGCCTCGGGGCGGCACGTCACTGTGTCCAGTGGGT--GGGGG--CT-CCAGGCTGCCGGCAGCAGGCTGTCCTACACGTCAGGCTGGAGGAGCGTCCATGGC-TTCTCTGGCGGGGCCTGAGGTGGGAGTGATGCGGGGAGGGTGGTGGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 16999890 442 - 21915920 TGATCGGCAGCCAGATCC-TTCACAGTGTCCCCACC---AGGACAGCGAGCCCAAGGA-CCCCACCTCTC-GATTGTACTGTGTCCAGGTCT--AC-GGCGACTCCAGGACAGCCCCTGAGAAAGGAGAACACAAGCAAACAGAAAGGGAGCCTCGGCTCCGCCCTCC---CTGAGCGC-CTCATCTAAGTCTGAGGGTGGTGCCACCTCTGAC----------GTATGGAGTCTCCGTCATCTATGACCAGACCCACGGGG------CACGCGGAGACACACAGA-------------------------------GGCCTGT---GATGGGAACAAACGCAGGCT-------CAGG-AGCCGCTGGTGGCCTCGGGGCGGCACGTCACTGTGTCCAGTGGGT--GGGGG--CT-CCAGGCTGCCGGCAGCAGGCTGTCCTACACGTCAGGCTGGAGGAGCGTCGGTGGC-TTCTCTGGCGGGGCCTGAGGTGGGAGTGATGCGGGGAGGGTGGTGGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 134787 442 - 21531802 TGATCGGCAGCCAGACGC-TTCACAGTGTCCCCACG---AGGACAGCGAGCACCAGGA-CCCCACCTCTC-GATTGTACTGTGTCCAGGTCT--AT-GGCGACTCCAGGACAGGCCCTGAGAAAGGAGAACACAAGCAAACAGAAAGGCAGCCTCGACTCTGCCCTCC---CTGAGCAC-CTCGTCTAAGTCTGAGGGTGGTGCCGCCTCTGAC----------GCATGGAGTCTCCGTCATCTATGACCAGACCCACGGGG------CATGCGGAGACACACAGA-------------------------------GGCCTGT---GATGGGAACAAACACAGGCT-------CAGG-AGCCGCTGGTGGCCTCGGGGCGGCACGTCACTGTGTCCAGCGGGT--GGGGG-CCT-CCAGGCTGCCGGCAGCAGGCTGTCCTACACGTCAGGCTGGACGAGCGTCCGTGG--TTCTCTGGCTGGGCCTGTGGTGGGAGTGATGTGGGGAGGGTGGTGGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 168538 442 - 2515279 TGATCGGCAGCCAGATGC-TTCACAGTGTCCCCACC---AGGACAGCGAGCCCAAGGA-CCCCACCTCTC-GATTGTACTGTGTCCAGGTCT--AC-GGCGACTCCAGGACAGCCCCTGAGAAAGGAGAACACAGGCAAACAGAAAGGGAGCCTCGGCTCTGCCCTCC---CTGAGCGC-CTCATCTAAGTCTGAGGGTGGTGCCACCTCTGAC----------GTATGGAGTCTCCGTCATCTATGACCAGACCCACGGGG------CACGCGGAGACACACAGA-------------------------------GGCCTGT---GATGGGAACAAACGCAGGCT-------CAGG-AGACGCTGGTGGCCTCGGGGTGGCACGTCACTGTGTCCAGTGGGT--GGGgg--ct-ccaggctgccggcagcaggctgtcctacatgtcaggctggaggAGCGTCTGTGGC-TTCTCTGGTGGGGCCTGAGGTGGGAGTGATGCGGGGAGGGTGGTGGT i manLeu1.NW_012101810v1 C 0 M 1700 s colAng1.NW_012117710v1 327079 443 + 6586416 CGATCAGCAGCCAGACGC-TTCACAGTGTCCCCACA---AGGACAGCGAGCACCAGGA-CCCCCCCTCTC-GATTGTACTGTGCCCAGGTCT--AC-GGCGACTCCAGGACAGCCCCTGAGAAAGGAGTACACAAGCAAACAGAAAGGGAGCATCGGCTCTGCCCTCC---CCGAGAGC-CTCGTCTAAGTCTGAGGGTGGTGCCACCTCTGAT----------GTATGGCGTCTCCGTCATCTATGACCAGACCTACGGGG------CACGCGGAGACACACAGA-------------------------------GGCCTGC---AATGGGAACAAACGCAGGCT-------CAGG-AGCCACTGGTGGCCTCGGGGCGGCACGTCACTGTGTCCAGCGGGT--GGGGG-GCT-CCAGGCTGCCGGCAGCAGGCCGTCCTACACGTCAGGCAGGAGGAGCGTCCATGGC-TTCTCTGGCTGGGCCTGAGGTGGGAGTGATGCGGGGAGGGTGGTGGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 54893 446 + 138751 TGATCAGGAGCCAGAGGTTTTTACAGAGTCTCCACA---AGGACAGCAAGCACCAGGA-CCACACCTCTC-GATTGCATTGTGTCCACTTCT--ACCTTTGACTCCAGGATATCCCCGGATAAAATTGAACATA----CACAGAAAGGGAACATCTGCTCTCCCCTCC---CTGAGTGC-CTCATGTAAGTCCAAGGGTGGTGCCGCATCTGAC----------AGACAGAGTCTCTGTAATTTAAGACCAGGCATATGGGG------TGTGCAGAGAGATGCAGA-------------------------------GCCCTGC---AATAGGAACAAACACGGGCT--CTGCACAAG-AGCTTCTGGTGACCTTGTGGTGGCACGTCACTGTGTCCAGTGGGGGAGGGGGAGCT-CCAGGCTGTAGGTGCTAGGCCATCCTATGGGTCAGG---AGAGAGTGCCCATGGC-TTCTCTGGCTAGGCCTGAGGTGGGAGTAATCAGGGGAGGGAGGTGAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 369571 433 - 2409723 TGATCAGGAGCCAGAGGTTTTTACAGGGTCCCCACC---AGGACAGCCAGCACCAGGA-CCCCACCTCTC-AATTGCATTGTGTCCCCTTCT--ACCTGTGACTCCAGGATATCCCCAGATAGAGTTGAACATA----CACAGAAAGGGAACATCTGCTCTCCCCTCC---CTGAGTGC-CTCATCTAAGTCCCAGGGTGGTGCCACATCTGAT----------GGACAGAGTCTCTGTAATGTATGACCAGGCATACGGGG------CATGCGGAGAGACGCAGA-------------------------------GCCCTGC---GATGGGAGCAAACATGGGCT--CTGCAGGGG-AGCTTCTGGTGACCTCAGGGTGTCACGTCACTGT-------------GGGGGAGCT-CCAGGCTGTGGGCGCcaggccatcctatgggtcaga---agagagcgcccatggc-ttctctggctaggcctgaggtgggagtgatcaggggagggaggtgat i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 532656 441 - 2125214 TGATCAGGAGCCAGAGGTTTTTACAGGGTCCCCACC---AGGACAGCGAGCGCCAGGA-CTCCACCTCTC-GATTGCATTGTGTCCACTTCT--ACCTGTGACTCCAGGATATCCCCGGATAAAGTTGAACATA----CACAGAAAGGGAACATCTGCTTTCCCCTCC---CTGAGCAC-CTCATCTAAGTCCAAG---GGTGCCACATCTGAT----------AGACAGAGTCTCTGTAATTTACGACCAGGCATACGGGG------TGTGCAAAGAGACGCAAA-------------------------------GCCCTGC---AATGGGAACAAACACGGGCT--CTGCACAGG-AGCTTCTGGCGACCTCAGGGTGGCACGTCACTGCGTCCAGTGGGT--GGGGGAGCT-CCAGGCTGTGGGCGCcaggccatcctgtgggtcagg---agagagcgcccatggc-ttctctggctaggcctgaggtggaagtgattgggggagggaggtgat i cebCap1.NW_016107703v1 I 87 C 0 s aotNan1.NW_018514293v1 116623 441 + 376347 TGATCAGGAGCCAGAGGTTTTTACAGGGTCCCCACC---AGGACAGCGAGCGCCAGGA-CCCCACCTCTC-GATTGCATTGTGTCTGC-TCT--AC--GTGACTCCGGGATATCCCCGGATAAAGTTGAACATA----CACAGACGGGGAACATCTGCTCTCCCCTCC---CTGAGCGC-CTCATCTACGTCCGAGGGCGGTGCCACATCTGAA----------CGACAGAGTCTCTGTAACTTACGACCAGGCATATGGGG------TGTGCGGAGAGACGCAGA-------------------------------GCCCTGT---GATGGGAACAAACACGGGCT--CTGCACAGG-AGCTTCTGGTGACCTTGGGGTGGCACGTCACTGTGTCCAATGGGT--GGGGGAGCT-CCAGGCTGTGGGCACCAGGCCATCCTATGGGTCAGG---AGAGAGTCCCCGTGGC-TACTCTGGCTAGGCCTGAGGTGGGAGTGATCGGGGGAGAGAGGTGAT i aotNan1.NW_018514293v1 I 87 C 0 s otoGar3.GL873611 2265919 356 - 8137123 TGATCTGCAGCCAAATATTCCTACAGTTTTCCCACA---AGGACAGCAGGCCCTGCGAGTCTCACATCCCTGGTTTTATTACATCCACTTCT-AAC-TGCAACTTCAGAACGTCCAATGATAGA---------------AAAGAATCAGATTTTCCTCTCTTCCTCCCTAACTGAGGGC-TCTTTCTAAGTCTGAGGGTTTTCTAACCTCTAAT----------GCATATGCTCTTTACAACTCAGGACCATGCACATAGAG------CGtgtggagctacacgaa-------------------------------gacgtccccagatcagaacaaatggaggctacttgctca-g-agctccctgtggcccaggggc----cagcACTGTGTCTGACAGGC--GGGCG--C-----------------------------------------GGAGAGC-----------------------------------------TGGGGGCTATggt--- i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61053459 428 - 77573801 -------CAGCCTAAT-------CAGAGCCCCCAGCTGGAGGACTGTGGACACTGTCATCCCCACTGTCC-TGGTTTGTTACAGTCACTTCCCCAT-TAGAAATTCAGGATAACCAATGACAAGGACAAAGACAATT-AATAAATAGAGGGTGTTGCCTCTCCCCCTC--ACTGGGTGCTCTTGTCT-----------------CCTGTCTGAG----------GCACATACTCATCATCACCCCTGACCAGATCCACGAAGATGCCCCACATGAGGACACTCAGAGGCTGCACGTTTGTAGTTTGCTCTGGTGAGGGGCTTGg---cattgtagtgaacaagggcc--c----caggaaggccctggtggt-----ggccacacg--actggg------aagt--gaggtgactacctggtcgcaggca--------ccctgcgtgaatggttagaggaacatatttggctttttctggctcgtcctgagttggaagtgatgagg------------- i canFam3.chr6 C 0 C 0 a score=574214.000000 s hg38.chr7_KI270899v1_alt 160596 70 + 190869 aaacaatcagagaaactggcagtgtggaccaagtcctgacctcggggcagctgctgcagaggCCCTGGCC s panTro5.chr7_NW_015973580v1_random 35643 70 - 83720 aaacaatcagagacactggcagtgtggaccaagtcctgacctcggggcagctgctgcagaggCCTTGGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550886 70 + 162613886 aaacaatcagagacactggcagtgtggaccaagtcctgacctcggggcagctgctgcagaggCCCTGGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122425 70 - 432965 aaacaatcagagacactggcagtgtggaccaagtcctgacctcggggcagctgctgcagaggCCCTGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181167 69 + 85365473 AAAAAATCAGAGACACTGGCAGTGTGGGCCAACTCCTGACCTT-GGGCAGCTGCTGCAGAGGCCCTGGAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028619 70 + 185818997 CACAAACCAGAGACGCTGGTGGTGTAGACCACGTCCAGACATCGGGGCAGCTGCTGCAGAGGCCCTGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33644569 70 + 192294377 CACAAACCAGAGACGCTGGTGGTGTAGACCACGTCCAGACATCGGGGCAGCTGCTGCAGAGGCCCTGGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4412156 70 - 9440265 CACAAACCAGAGACACTGGTGGTGTAGACCACGTCCTGACCTCGGGGCAGCTGCTGCAGAGGCCCTGGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17000332 70 - 21915920 CACAAACCAGAGACACTGGTGGTGTGGACCACATCCTGACCTCGGGGCAGCTGCTGCAGAGGCCCTGGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135229 70 - 21531802 CACAAACCAGAGACACTGGCGGTGTGGACCACGTCCTGACCTCGGGGCAGCTGCTGCAGAGGCCCTGGCC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327522 70 + 6586416 CACAAACCAGAGACACTGGCGGTGTGGACCAAGTCCTGACCTCGGGATAGCTGCTGCAGAGGCCCTGGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55339 70 + 138751 CAAAAATCAGAGGCACTGGCAGTACAGACCGAGTCCTGACCTCGGGGCAGCTGCTGCAGAGGCCCTGGCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 370004 70 - 2409723 caaaaattagaggcactggcagtacagaccaagtcctgacctcgaggcagctgctgcagaggCCTTGGCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 533097 70 - 2125214 caaaaatcagaggcactggcagtacagaccaagtcctgacctcagggcagctgctgcagaggCCCTGGCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 117064 70 + 376347 CAAAAATCAGAGGCACTGGCAGTACAGACCGAGTCCTGACCTCGGTGCAGCTGCTGCAGAGGCCCTGGCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2266275 30 - 8137123 ----------------tggtagtgtgg----------------ggggcagctgt--------acctatcc i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61053887 54 - 77573801 --------------accaacaatGCAGGTTGTTCTCTAATTTT--TGCAGCCACTGATGAGGTCATGACC i canFam3.chr6 C 0 I 74 e manLeu1.NW_012101810v1 168980 1700 - 2515279 M a score=263643.000000 s hg38.chr7_KI270899v1_alt 160666 43 + 190869 AGAGTCCCATGGGCATCCTCAGTCCGGCTGGGGTTGGG--------------------------------------------------GTGTC s panTro5.chr7_NW_015973580v1_random 35713 76 - 83720 AGAGCCCCATGGGCATCCTCAGTCCGGCTGGGGTTGGGGTGTCCCTGGAGGG-----------------TCTGTCTCCTGGAAGGTCCGTGTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 550956 93 + 162613886 AGAGCCCCATGGGCATCCTCAGTCCGGCTGGGGTTGGGGTGTCCCTGGAGGGTCTGTGTCCCTGATGGATCTGTCTCCTGGAAGGTCTGTGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122495 43 - 432965 AGAGCCCCATGGGCATCTTCAGTCCGGCTGGGGTTGGG--------------------------------------------------GTGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181236 43 + 85365473 AGAGCCCCATGGGCATCCTTAGTCCGGCTGGGGTTGGG--------------------------------------------------GTGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028689 35 + 185818997 --------ATGGGCATCTTCAGTCCGGCTGGGGTTGGG--------------------------------------------------GTGTC i rheMac8.chr3 C 0 I 67 s macFas5.chr3 33644639 35 + 192294377 --------ATGGGCATCTTCAGTCCGGCTGGGGTTGGG--------------------------------------------------GTGTC i macFas5.chr3 C 0 I 67 s macNem1.NW_012019910v1 4412226 35 - 9440265 --------ATGGGCATCTTCAGTCCGGCTGGGGTTGGG--------------------------------------------------GTGTC i macNem1.NW_012019910v1 C 0 I 116 s cerAty1.NW_012002954v1 17000402 35 - 21915920 --------ATGGGCATCTTCAGTCCGGCTGGGGTTGGG--------------------------------------------------GTGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135299 43 - 21531802 GGAGCCCAGTGGGCATCTTCAGTCCGGCTGGGGTTGGG--------------------------------------------------GTGTC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327592 43 + 6586416 AGAGCCCCATGGGCGTCTTCAGTCCAGCTGGAGTTGGG--------------------------------------------------GTGTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55409 43 + 138751 AGAGCCCCATGGACATCCTCAGTCTGTCTGGGGTTGGG--------------------------------------------------GTGTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 370074 43 - 2409723 AGAGCCCCATGGGCATCCTGAGTCTGGCTGGGGTCAGG--------------------------------------------------GTGTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 533167 43 - 2125214 AGAGCCCCATGGGCATCCTCAGTCTGGCTGGGGTTGCG--------------------------------------------------GTGTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 117134 43 + 376347 AGAGCCCCATGGCCATCCTCCATCTGGCTGGGGTCGGG--------------------------------------------------GTGTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2266305 12 - 8137123 agaag---agagaca------------------------------------------------------------------------------ i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M a score=67864.000000 s hg38.chr7_KI270899v1_alt 160709 8 + 190869 CCTGGAGG s panTro5.chr7_NW_015973580v1_random 35789 8 - 83720 CCTGGAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551049 8 + 162613886 CCTGGAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122538 8 - 432965 CCTGGAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181279 8 + 85365473 CCTGGAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028791 8 + 185818997 CCTGGAGG i rheMac8.chr3 I 67 C 0 s macFas5.chr3 33644741 8 + 192294377 CCTGGAGG i macFas5.chr3 I 67 C 0 s macNem1.NW_012019910v1 4412377 8 - 9440265 CCTGGAGG i macNem1.NW_012019910v1 I 116 C 0 s cerAty1.NW_012002954v1 17000437 8 - 21915920 CCTGGTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135342 8 - 21531802 CCTGGTGG i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 55452 8 + 138751 CCTGTAGG i calJac3.chrUn_GL286444 C 0 I 19 s saiBol1.JH378296 370117 8 - 2409723 CCTGGAGG i saiBol1.JH378296 C 0 I 20 s cebCap1.NW_016107703v1 533210 8 - 2125214 CCTGGAGG i cebCap1.NW_016107703v1 C 0 I 304 s aotNan1.NW_018514293v1 117177 8 + 376347 CCTGGAGG i aotNan1.NW_018514293v1 C 0 I 330 s otoGar3.GL873611 2266317 8 - 8137123 tctgatgg i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 327635 0 + 6586416 C e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M a score=44129.000000 s hg38.chr7_KI270899v1_alt 160717 41 + 190869 GTCCGTGTC-------------------------------------------------CCTGGA-GGGTCC-GTGTCCCTGGT----------------------------------GGATCCGTC s panTro5.chr7_NW_015973580v1_random 35797 41 - 83720 GTCCGTGTC-------------------------------------------------CCTGGA-GGGTCC-GTGTCCCTGGC----------------------------------GGATCCGTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551057 41 + 162613886 GTCCGTGTC-------------------------------------------------CCTGGA-GGGTCC-GTGTCCCTGGC----------------------------------GGATCCGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122546 41 - 432965 GTCCGTGTC-------------------------------------------------CCTGGA-GGGTCT-GTGTCCCTGGT----------------------------------GGATCCGTC i gorGor5.CYUI01015914v1 C 0 I 232 s nomLeu3.chr20 181287 23 + 85365473 GTCAG---------------------------------------------------------------------GTCCCTGGT----------------------------------GGATCCGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028799 90 + 185818997 GTCGGTGTCCCTGGCAGGTGCATGTCCCTGGCGGGTCCATCTCCTGGCCGGTCCATCTCCTGGA-GGGTCG-GTGTCCCTGGC----------------------------------GGGTCCGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33644749 90 + 192294377 GTCGGTGTCCCTGGCAGGTGCATGTCCCTGGCGGGTCCATCTCCTGGCCGGTCCATCTCCTGGA-GGGTCG-GTGTCCCTGGC----------------------------------GGGTCCGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4412385 41 - 9440265 GTCGGTGTC-------------------------------------------------CCTGGA-GGGTCG-GTGTCCCTGGT----------------------------------GGGTCCGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17000445 108 - 21915920 GTCCGTCTC-CTGAAGGATCGGTGTCCCTGGAGGGTCAGTGTC---------------CCTGGA-GGGTCA-GTATCCCTGGAGGGTCGGTGTCCCTGGCAGATGCATGTCCCTGGCGGGTCCATC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135350 56 - 21531802 GTCCGTCTC------------------CTGGAGGGTCCGTCT----------------CCTGGA-GGGTCC-GTGTCCCTGGA----------------------------------GGGTCCGTC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327635 15 + 6586416 -----------------------------------------------------------------------------CCTGGC----------------------------------GGGTCCGTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55479 42 + 138751 ATCAGTGTC-------------------------------------------------CCTGGTTGGGTCA-TTGTCCCTGGT----------------------------------AGATCCATC i calJac3.chrUn_GL286444 I 19 C 0 s saiBol1.JH378296 370145 38 - 2409723 GTCAGTG-C-------------------------------------------------CCTGAGCAGATCAGGTGTCCCAGGC----------------------------------GGATC---- i saiBol1.JH378296 I 20 C 0 s otoGar3.GL873611 2266325 13 - 8137123 -------------------------------------------------------------------gtca-g--------------------------------------------gggttcgt- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I e cebCap1.NW_016107703v1 533218 304 - 2125214 I a score=31579.000000 s hg38.chr7_KI270899v1_alt 160758 12 + 190869 TCCTGGAGGGTC s panTro5.chr7_NW_015973580v1_random 35838 12 - 83720 TCCTGGAGGGTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551098 11 + 162613886 TCCTGGAGGTC- i panPan2.chr7 C 0 I 119 s gorGor5.CYUI01015914v1 122819 12 - 432965 TCCTGGAGGGTC i gorGor5.CYUI01015914v1 I 232 C 0 s nomLeu3.chr20 181310 3 + 85365473 TCC--------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028889 12 + 185818997 TCCTGGAGGGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33644839 12 + 192294377 TCCTGGAGGGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4412426 6 - 9440265 TCCTGG------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17000553 12 - 21915920 TCCTGGCCGGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135406 12 - 21531802 TCCTGGAGGGTC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327650 12 + 6586416 TCCTGGAGGGTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55521 12 + 138751 TCCTGGCAGCTT i calJac3.chrUn_GL286444 C 0 C 0 e otoGar3.GL873611 2266338 0 - 8137123 C e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I e saiBol1.JH378296 370183 0 - 2409723 C e cebCap1.NW_016107703v1 533218 304 - 2125214 I a score=249164.000000 s hg38.chr7_KI270899v1_alt 160770 59 + 190869 CATGTC----------------CCTGGA-GGGTCCATGTCCCTGGTGGATCCGTCTCCTGGAGGG------------------TCCGTGTCCCT s panTro5.chr7_NW_015973580v1_random 35850 59 - 83720 CGTGCC----------------CCTGGA-GGGTCCGTGTCCCTAGTGGATCCGTCTCCTGGAGGG------------------TCCGTGTCCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551228 59 + 162613886 CATGTC----------------CCTGGC-GGGTCCGTGTCCCTGGTGGATCCGTCTCCTGGAGGG------------------TCCGTGTACCT i panPan2.chr7 I 119 C 0 s gorGor5.CYUI01015914v1 122831 59 - 432965 CGTGTC----------------CCTGGA-GGGTCCGTGTCCCTGGTGGATCCGTCTCCTGGAGGG------------------TCCGTGTCCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181313 50 + 85365473 ------------------------TGGA-GGGTCCGTGTCCCTGGTGGATCCGTCTCCTGGAGGG------------------T-CGGGTCCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028901 59 + 185818997 AGTGTC----------------CCTGGA-GGGTCGGTGTCCCTGATGGGTCCGTCTCCTGGAGGG------------------TCAGTGTCCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33644851 59 + 192294377 AGTGTC----------------CCTGGA-GGGTCGGTGTCCCTGATGGGTCCGTCTCCTGGAGGG------------------TCAGTGTCCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4412432 59 - 9440265 AGTGTC----------------CCTGGA-GGGTCGGTGTCCCTGGTGGGTCTGTCTCCTGGAGGG------------------TCAGTGTCCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17000565 58 - 21915920 CGTCT-----------------CCTGGA-GGGTCGGTGTCCCTGGTGGGTCCGTCTCCTGGAGGG------------------TCGGTGTCCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135418 75 - 21531802 CGTGTCCCTGGAGGGTCCGTCTCCTGGA-GGGTCGGTGTCTCTGGCAGGTCCGTCTCCTGGAGGA------------------TCGGTGTCCCC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327662 59 + 6586416 GGTGTC----------------CCTGGC-AGGTCTGTGTCCCTGGCAGGTCCGTCTCCTGGAGGG------------------TCGGTGTCCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55533 78 + 138751 GGTGTC----------------CCTGGGTGGGTCAGTGTGCCTAATGGATCCACCTCCTGGCAGCTTGGTATCTGTGGGCAGATTGGTGTCCCT i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 370183 60 - 2409723 AGTGTC----------------CCTGGGTGGGTCATTGTCCCTGGCAGATCCATCTCCTGGCAGC------------------TTGGTGTCCCT i saiBol1.JH378296 C 0 I 174 s otoGar3.GL873611 2266338 12 - 8137123 --------------------------------------------ttggttttctct-------------------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I e cebCap1.NW_016107703v1 533218 304 - 2125214 I a score=2756.000000 s hg38.chr7_KI270899v1_alt 160829 9 + 190869 GGTGGA---------------------------------TCC s panTro5.chr7_NW_015973580v1_random 35909 42 - 83720 GGTGGATCCGTCTCCTGGAGGGTCCGTGCCCCTGGAGGGTCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551287 42 + 162613886 GGTGGATCCGTCTCCTGGAGGGTCCGTGTCCCTGGCGGGTCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122890 9 - 432965 GGCGGG---------------------------------TCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181363 24 + 85365473 GGTGGATCCGTCTCCTGGAGG------------------GTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34028960 9 + 185818997 GGAGGG---------------------------------TCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33644910 9 + 192294377 GGAGGG---------------------------------TCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4412491 9 - 9440265 GGAGGG---------------------------------TCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17000623 9 - 21915920 GGAGGG---------------------------------TCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135493 9 - 21531802 GGAGGG---------------------------------TCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327721 9 + 6586416 GGAGGG---------------------------------TCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55612 9 + 138751 AGTGGG---------------------------------TGG i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 370417 9 - 2409723 GGTGGG---------------------------------TCA i saiBol1.JH378296 I 174 C 0 s otoGar3.GL873611 2266350 9 - 8137123 ggctga---------------------------------tcc i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I e cebCap1.NW_016107703v1 533218 304 - 2125214 I a score=155152.000000 s hg38.chr7_KI270899v1_alt 160838 30 + 190869 GTGTCCCTAGTAGATCCGTCT---CCTGGAGGG s panTro5.chr7_NW_015973580v1_random 35951 30 - 83720 GTGTCCCTAGTGGATCCGTCT---CCTGGAGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551329 30 + 162613886 GTGTCCCTGGTGGATCCGTCT---CCTGGAGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122899 30 - 432965 GTGTCCCTGGTGGATCCGTCT---CCTGGAGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181387 30 + 85365473 AGGTCCCTGGTGGATCCGTCT---CCTGGAGGG i nomLeu3.chr20 C 0 I 16 s rheMac8.chr3 34028969 30 + 185818997 GTGTCCCTGGTGGGTCCGTCT---CCTGGAGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33644919 30 + 192294377 GTGTCCCTGGTGGGTCCGTCT---CCTGGAGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4412500 30 - 9440265 GTGTCCCTGGTGGGTCCGTCT---CCTGGAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17000632 30 - 21915920 GTGTCCCTGATGGGTCCGTCT---CCTGGAGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135502 31 - 21531802 GCATCCCTGGAGGATTGGTGTC--CCTGGCAGG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327730 16 + 6586416 GCGTCCCTGGCAGGTG----------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55621 30 + 138751 GTATCCCTGGTAGATCAGTCT---CCTGGCAGG i calJac3.chrUn_GL286444 C 0 I 246 s saiBol1.JH378296 370426 30 - 2409723 GTGTCCCTAGCGGATCCATCT---CCTGGCAGG i saiBol1.JH378296 C 0 I 764 s cebCap1.NW_016107703v1 533522 30 - 2125214 GTGTCCCTGGTAGATCTGTCT---CCTGGTGGG i cebCap1.NW_016107703v1 I 304 C 0 s otoGar3.GL873611 2266359 12 - 8137123 ---------------------caagttggaagG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I a score=12198.000000 s hg38.chr7_KI270899v1_alt 160868 2 + 190869 TC s panTro5.chr7_NW_015973580v1_random 35981 2 - 83720 TC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551359 2 + 162613886 TC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122929 2 - 432965 TC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181433 2 + 85365473 TC i nomLeu3.chr20 I 16 C 0 s rheMac8.chr3 34028999 2 + 185818997 TC i rheMac8.chr3 C 0 I 319 s macFas5.chr3 33644949 2 + 192294377 TC i macFas5.chr3 C 0 I 319 s macNem1.NW_012019910v1 4412530 2 - 9440265 TC i macNem1.NW_012019910v1 C 0 I 319 s cerAty1.NW_012002954v1 17000662 2 - 21915920 TC i cerAty1.NW_012002954v1 C 0 I 336 s chlSab2.chr28 135533 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 55897 2 + 138751 TC i calJac3.chrUn_GL286444 I 246 C 0 s saiBol1.JH378296 371220 2 - 2409723 TC i saiBol1.JH378296 I 764 C 0 s cebCap1.NW_016107703v1 533552 2 - 2125214 TC i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 327746 0 + 6586416 C e otoGar3.GL873611 2266371 0 - 8137123 C e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I a score=80935.000000 s hg38.chr7_KI270899v1_alt 160870 11 + 190869 CGTGTCCCTGG s panTro5.chr7_NW_015973580v1_random 35983 11 - 83720 CGTGTCCCTGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551361 11 + 162613886 CGTGTCCCTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122931 11 - 432965 CGTGTCCCTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181435 11 + 85365473 CATGTCCCTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029320 11 + 185818997 CGTGTCTCTGG i rheMac8.chr3 I 319 C 0 s macFas5.chr3 33645270 11 + 192294377 CGTGTCTCTGG i macFas5.chr3 I 319 C 0 s macNem1.NW_012019910v1 4412851 11 - 9440265 CGTGTCTCTGG i macNem1.NW_012019910v1 I 319 C 0 s cerAty1.NW_012002954v1 17001000 11 - 21915920 CGTGTCTCTGG i cerAty1.NW_012002954v1 I 336 C 0 s chlSab2.chr28 135535 11 - 21531802 CGTGTCTCTGG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327746 11 + 6586416 CGTGTCTCTGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55899 11 + 138751 CATGTCCCTAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 371222 11 - 2409723 CATGTCCCTAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 533554 11 - 2125214 AGTGTCCCTGG i cebCap1.NW_016107703v1 C 0 I 129 e otoGar3.GL873611 2266371 0 - 8137123 C e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I a score=3782.000000 s hg38.chr7_KI270899v1_alt 160881 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 35994 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 I 510 s panPan2.chr7 551372 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122942 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181446 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029331 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645281 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4412862 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001011 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135546 1 - 21531802 C i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327757 1 + 6586416 C i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55910 1 + 138751 T i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 371233 1 - 2409723 C i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2266371 0 - 8137123 C e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I e cebCap1.NW_016107703v1 533565 129 - 2125214 I a score=34716.000000 s hg38.chr7_KI270899v1_alt 160882 6 + 190869 GGATCC s panTro5.chr7_NW_015973580v1_random 36505 6 - 83720 GGATCC i panTro5.chr7_NW_015973580v1_random I 510 C 0 s panPan2.chr7 551373 6 + 162613886 GGATCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122943 6 - 432965 AGATCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181447 6 + 85365473 GGATCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029332 6 + 185818997 AGGTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645282 6 + 192294377 AGGTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4412863 6 - 9440265 AGGTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001012 6 - 21915920 AGGTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135547 6 - 21531802 AGGTCC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 327758 6 + 6586416 AGGTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 55911 6 + 138751 GGATCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 371234 6 - 2409723 GGATCC i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2266371 0 - 8137123 C e canFam3.chr6 61053941 74 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I e cebCap1.NW_016107703v1 533565 129 - 2125214 I a score=74702.000000 s hg38.chr7_KI270899v1_alt 160888 15 + 190869 GTCTCTGA--CCGCGCG s panTro5.chr7_NW_015973580v1_random 36511 15 - 83720 GTCTCTGA--CTGCACG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551379 15 + 162613886 GTCTCTGA--CTGCACG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122949 15 - 432965 ATCTCTGA--CTGCACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181453 15 + 85365473 GTCTCTGA--CCTCACG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029338 17 + 185818997 GTCTCTGAAGCCGCACG i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33645288 17 + 192294377 GTCTCTGAAGCCGCACG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4412869 17 - 9440265 GTCTCTGAAGCCGCACG i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 17001018 17 - 21915920 GTCTCTGAAGCCACACG i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 135553 17 - 21531802 GTCTCTGAAGCCGCACG i chlSab2.chr28 C 0 I 1 s colAng1.NW_012117710v1 327764 17 + 6586416 ATCTCTGAGGCCGCACG i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chrUn_GL286444 55917 17 + 138751 CTCTCCAAAGCCGCATG i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 371240 17 - 2409723 CTCTCCAAAGCCGCATG i saiBol1.JH378296 C 0 I 1 s canFam3.chr6 61054015 15 - 77573801 --GTCTGATACCATGCC i canFam3.chr6 I 74 C 0 e otoGar3.GL873611 2266371 0 - 8137123 C e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117185 330 + 376347 I e cebCap1.NW_016107703v1 533565 129 - 2125214 I a score=2574559.000000 s hg38.chr7_KI270899v1_alt 160903 305 + 190869 TGCTCTTCACCATGGAAGGAGGTGCTGGTAGCCAAGCC-----GCCCTCCCCAAGTGGGCGTCCACTTTGAGGAAACGCGTGTGTGAGTCCCC-----TTGTTGGCT-------GGGTGT-CTCCGTCTAAAGGGACAGCTGGAA----CTCCCCACAGTACAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTCCCTGCTGCC-----CGAGGTCTGGTGAGAGGCTTGATGGAGGATTCTGCCAACCCCC--ACCTCAAAACCCTCACAGCAGCTGCATTTTGAGGTTTTGTTCAATTTTATTTGCAGGTCTTCAAAA s panTro5.chr7_NW_015973580v1_random 36526 305 - 83720 TGCTCTTCACCATGGAAGGAGGTGCTGGTAGCCAAGCC-----GCCCTCCCCAAGTGGGCGTCCACTTTGAGGAAACGCGTGTGTGAGTCCCC-----TTGTTGGCT-------GGGTGT-CTCCGCCTAAAGGGACAGCTGGAA----CACCCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTCCCTGCTGCC-----CGAGGTCTGGTGAGAGGCTTGATGGAGGATTCTGCCAACCCCC--ACCTCAAAACCCTCACAGCAGCTGCATTTTGAGGTGTTGTTCAATTTTATTTGCAGGTCTTCAAAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551394 305 + 162613886 TGCTCTTCACCATGGAAGGAGGTGCTGGTAGCCAAGCC-----GCCCTCCCCAAGTGGGCGTCCACTTTGAGGAAACGCGTGTGTGAGTCCCC-----TTGTTGGCT-------GGGTGT-CTCCGCCTAAAGGGACAGCTGGAA----CACCCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTCCCTGCTGCC-----CGAGGTCTAGTGAGAGGCTTGATGGAGGATTCTGCCAACCCCC--ACCTCAAAACCCTCACAGCAGCTGCATTTTGAGGTGTTGTTCAATTTTATTTGCAGGTCTTTAAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 122964 304 - 432965 TGCTCTTCACCATGGAAGGAGGTGCTGGTAGCCAAGCT-----GCCCTCCCCAAGTGGGGGTCCGCTTTGAGGAAACGCGTGTGTGAGTCCCC-----TTGTTGGCT-------GGGTGT-CTCCGCCTAAAGGGACAGCTGGAA----CTCCCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGC-GGGAT-GTCCCTGCTGCC-----CGAGGTCTGGTGAGAGGCTTGATGGAGGATTCTGCCAACCCCC--ACCTCAAAACCCTCACAGCAGCTGCATTTTGAGGTTTTGTTCAATTTTATTTGCAGGTCTTCAACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181468 304 + 85365473 TGCTCTTCACCATGGAAGGAGGTGCTGGTAGCCAAGCC-----GCCCTCCCCAGGTGGGCGTCCACTTTGAGGAAACGCGTGTGTGAGTCCCC-----TTGTTGTCT-------GGGTGT-CTCCGTCTAAAGGGACAGCTGGAA----CT-CCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTCCCTGCTGCC-----CGAGGTCTGCTGAGAGGCTTGATGGAGGCTTCTGCCAACCCCC--ACCTCAAAACCCTCACAGCAGCTGCATTTTGAGGTTTTGTTCAATTTTATTTGCAGGTCCTCAAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029356 303 + 185818997 TGCTCTTCACCATGGAAGGAGGTGCTGGT-GCCAAGTC-----GCCCTCCCCAGGTGAGCATCCACTTTGAGGAGACGCCTGTGTGGGTCCCC-----TCGTTGGCT--------GGTGT-CTCTGTCTAAAGGGAGAGCGGGAA----CTCCCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTGCCTGCTGCC-----CAAGGTCTGGTGAGAGGCTTGATGGAGGATTCGGCCAACCCCC--ACCTCAAACCTCGCACAGCAGTCACATTTGGAGGTTTTGTTCAATTTTATTTGCAGATCCTCAAAA i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33645306 303 + 192294377 TGCTCTTCACCATGGAAGGAGGTGCTGGT-GCCAAGTC-----GCCCTCCCCAGGTGAGCATCCACTTTGAGGAGACGCCTGTGTGGGTCCCC-----TCGTTGGCT--------GGTGT-CTCTGTCTAAAGGGAGAGCGGGAA----CTCCCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTGCCTGCTGCC-----CGAGGTCTGGTGAGAGGCTTGATGGAGGATTCGGCCAACCCCC--ACCTCAAACCTCGCACAGCAGTCACATTTGGAGGTTTTGTTCAATTTTATTTGCAGATCCTCAAAA i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4412887 303 - 9440265 TGCTCTTCACGATGGAAGGAGGTGCTGGT-GCCAAGTC-----GCCCTCCCCAGGTGAGCATCCACTTTGAGGAGATGCCTGTGTGGGTCCCC-----TCGTTGGCT--------GGTGT-CTCTGTCTAAAGGGAGAGCGGGAA----CTCCCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGTAGGGAT-GTGCCTGCTGCC-----CGAGGTCTGGTGAGAGGCTTGATGGAGGATTCGGCCAACCCCC--ACCTCAAACCTCGCACAGCAGTCACATTTGGAGGTTTTGTTCAATTTTATTTGCAGATCCTCAAAA i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 17001036 303 - 21915920 TGCTCTTCACCATGGAAGGAGGTGCTGGT-GCCAAGTC-----GCCCTCCCCAGGTGAGCATCCACTTTGAGGAGACGCCTGTGTGGGTCCCC-----TCGTTGGCT--------GGTGT-CTCTGTCTAAAGGGAGAGCGGGAA----CTCCCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTGCCTGCTGCC-----CGAGGTCTGGTGAGAGGCTTGATGGAGGATTCGGCCAACCCCC--ACCTCAAACCTCGCACAGCAGTCACATTTGGAGGTTTTGTTCAATTTTATTTGCAGATCCTCAAAA i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 135571 303 - 21531802 TGCTCTTCACCATGGAAGGAGGTGCTGGT-GCCAAGTC-----GCCCTCCCCAGGTGAGCGTCCACTTTGAGGAGACGCCTGTGTGGGTCCCC-----TCGTTGGCT--------GGTGT-CTCTGTCTGAAGGGAGAGCGGGAA----CTCCCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTTCCTGCTATC-----CGAGGTCTGGTGAGAGGCTTGATGGAGGATTCCGCCAACCCCC--ACCTCAAAACTCGCACAGCAGTCACACTTGGAGGTTTTGTTCAATTTTATTTGCAGATCCTCGAAA i chlSab2.chr28 I 1 C 0 s colAng1.NW_012117710v1 327782 304 + 6586416 TGCTCTTCACCATGGAAGGAGGTGCTGGT-GCCAAGTC-----ACCCTCTCCAGGTGAGCGTCCACTTTGAGGAGACGCCTGTGTGGGTCCCC-----TCGTTGGCT--------GGTGT-CTCTGTCTAAAGGGAGAGCGGGAA----CTCCCCACAGTCCAAGGTCTC-ACCAGGGCCCCTCAGATCCCACACAGCTGCAGGGATGGTCCCTGCTGCC-----CGAGGTCTGGTGAGAGGCTTGATGGAGGATTCTGCCAACCCCC--ACCTCAAAACTCGCACAGCAGTCACATTTTGAGGTTTTGTTCCATTTTATTTGCAGATCCTCAAAA i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chrUn_GL286444 55935 304 + 138751 TGCTCTTCACCATGGAGGGAGGTGCTAGTGGCCAAGCC-----GCCCTCCCCAAGTGGGCATCCACTTGGAGGAAA-GCATGTGTGGGTCCCC-----TTGTTGGCT-------GGGTGT-CCCCGTCTAAAGGGACAGCTGGAA----CTCCCTGTGGTCCAAGGTCTC-ACTGGAGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTCCCCACTGCC-----CGAGGTCTGGTGAGAGGCTTGATGGGGGATTCGGCCAACCTCC--ACCTCAAAACCCTCACAGCAGCTGCATGTTGAGGTTTCATTCAATTTTATTTACAGGTCCTCAGAA i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 371258 288 - 2409723 TGCTCTTCACCACGGAGGGAGGGGCTGGTGGCCAAGCC-----GTCCTCCCCAAGTGGGCATCCACTTGGAGGAAA-ACATGTGTGGGTCCCC-----TTGTTGGCT-------AGGTGT-CCCCGTCTACAGGGACAACTGGAA----CTCCCTGTGGTCCAAGGTCTC-ACTGGAGCCCCTCAGATCCCACGCAGCTGCAGGGAT-GTCCCTGTTGCC-----TGAGGTCTGGTGAGAGGCTTGGTGAGAGG------------------CTCAAAACCCTCACAGCAGCTGCAGGTTGAGGTTTCATTCAATTTTATTTACAGGTCCTCAGAA i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 533694 303 - 2125214 TGCTCCTCACCAACGAGGGAGGTGCTGGTGGCCAAGCC-----ACCCTCCCCAAGTGGGCATCCACTTGGAGGAAA-GCATGTGTGGGT-CCT-----TTGTTGGCT-------GGGTGT-CCCTGTCTAAAGGGACAACTGGAA----CTCCCTGTGGTCCAAGGTCTC-ACTGGAGCCCCTCAGATCCCACACAGCTGCAGGGAT-GTCCCCGCTGCC-----TGAGATCTGGTGAGAGACTTGATGGGGGATTCGGGCAACTCCC--ACCTCAAAACCCTCACAGCAGCTGCATGTTGAGGTTTCATTCAATTTTATTAACAGTTCATCAGAA i cebCap1.NW_016107703v1 I 129 C 0 s aotNan1.NW_018514293v1 117515 304 + 376347 TGCTCCTCACCAGGGAGGGAGGTGCTGGTGGCCAAGCC-----GCCCTCCCCAAGTGGGCACCCACTTGGAGGAAA-GCATGTGTGGGTCCCC-----TTGTTGGCT-------GGGTGT-TCCCATCTAAAGGGAGAGCTGGAA----GTCCCTGTGGTCCAAGGTCTC-ACTGGAGCCGCTCAGATCCCACACAGCTGCAGGGAT-GTCCCCGCTGCC-----CGAGGTCTGGTGAGAGGCTTGATGGGGGATTCGGCCAACCCCC--ACCTCAAAACCCTCACAGCAGCTGCACGTTGAGGTTCCATTCCATTTTATTTACGGGTCCTCAGAA i aotNan1.NW_018514293v1 I 330 C 0 s otoGar3.GL873611 2266371 246 - 8137123 -----------ATGGGGGGAGGTG------GTCA---------------CACATCAGGGCCTCGGCTCTGA----------------GTCCCCTCACATTGGTGTCTACAGGGCAGGCAT-TCCAGTCTGCAGGAATAGCTGGGAACTCCTCCACCAGGCCCCAGGTCTCTCCCAAGGCCCCTCG----------------AGTGCT-ATTCCTGGTGCC-----CAAGGC----TGCGGAGCTTGGTGGGGGAATTT-------------CCCCAAACCC--CACAGTAGCTCCACTTTGATGTTTTGCTCAATTTTATTTACAGGTCCTCAGAG i otoGar3.GL873611 C 0 I 17 s canFam3.chr6 61054030 286 - 77573801 TGTCTT-----ATAGGACGAGGTGCTCAAGGCCCAACCAGCCAGCCCTCCCAAAGAGGG-GTCCACTTGGAGGGAATGCCCATG--------------TCATCAGAC-------AGGTGTGCACAACGTGAAGGGACTGCTGG------CACCAGGGAGGTCGGGGTCTCTAACAGGGTCCCTTAGATCCTGCAGAGTGATAGAGGT-GTCCCTGGCACCATCCAATAGGGGTGAGGAAAGGTCGAGGAGTGGATTC---CAAGCCCCTTTCGTCGGCAACCCCCTAGTAACTTTGTTGTGATGTTTTATCTGCttttatttt------------- i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 168980 1700 - 2515279 M a score=53661.000000 s hg38.chr7_KI270899v1_alt 161208 16 + 190869 TGAA-AAAAATTTATAT s panTro5.chr7_NW_015973580v1_random 36831 16 - 83720 TGAA-AAACACATATAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551699 16 + 162613886 TGAA-AAACATATATAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123268 16 - 432965 TGAA-AAAACTATATAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181772 17 + 85365473 TGAATATATCTATATCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029659 15 + 185818997 TGAA-AAA-ATATATAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645609 15 + 192294377 TGAA-AAA-ATATATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413190 15 - 9440265 TGAA-AAA-ATATATAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001339 15 - 21915920 TGAA-AAA-ATATATAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135874 16 - 21531802 TGAA-AAATATATATAT i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 328086 10 + 6586416 TGAA-AAA------TAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 56239 16 + 138751 TGAA-AAAAAATAGTGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 371546 15 - 2409723 TGAA-AAAAAA-AGTGT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 533997 16 - 2125214 TGAA-AAAAAACAGTGT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 117819 16 + 376347 TGAA-AAAAAGTAGTGT i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61054316 16 - 77573801 ttaa-aaaattttaaat i canFam3.chr6 C 0 I 33 e otoGar3.GL873611 2266617 17 - 8137123 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M a score=1075954.000000 s hg38.chr7_KI270899v1_alt 161224 161 + 190869 ----------------GTACCAGGCCAGGTGTGgtggtggctcatgcctgtaatcccggcagttttggaggtcaaggtgggcagattgttgaacccaggtctttatggccagcctgggcagcgtagtgagacctcacctgtac--aaaaaattaaaacgtagcgagacacggtggcagg s panTro5.chr7_NW_015973580v1_random 36847 161 - 83720 ----------------GTACCAggccaggtgtggtcgtggctcatgcctgtaatcccggcagttttggaggtcaaggtgggcagattgttgaacccaggtctttatggccagcctgggcagcatagtgagacctcatctctac--aaaaaattaaaacgtagcgaggcacggtggcagg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551715 161 + 162613886 ----------------GTACCAGGCCAGGTGTGgtggtggctcatgcctgtaatcccggcagttttggaggtcaaggtgggcagattgttgaacccaggtctttatggccagcctgggcagcatagtgagacctcatctctac--aaaaaattaaaacgtagcgaggcacggtggcagg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123284 161 - 432965 ----------------GTACCAGGCCAGGTGTGgtggtggctcatgcctgtaatcccggcagttttggaggtcgaggtgggcagattgttgaacccaggtctttatggccagcctgggcagcatagtgagacctcatctctac--aaaaaattaaaacgtagcgaggcacggtggcagg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181789 158 + 85365473 ----------------ACACCAggccaggtgtg---gtggctcatgcctgtaatcccggcagttttgggggtcaaggtgggcgggctgttgaccccaggtctttatggccagcctgggcaacacagtgagacctcatctctac--aaaaaattaaaacgtagtgaggcgtcgtggcagg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029674 159 + 185818997 ----------------ACACTAggccaggtgtggtgggagctgat-cctgtcatcccagcagttttggagatcgagttgagcagattgccgagtccaggtccttacggccagcctgggcaacacggcgagacctcatctctac---aaaaattaaaaggtggcgaggcgccgcggcagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645624 159 + 192294377 ----------------ACACTAggccaggtgtggtgggagctgat-cctgtcatcccagcagttttggagatcgagttgagcagattgccgagtccaggtccttacggccagcctgggcaacacggcgagacctcatctctac---aaaaattaaaaggtggcgaggcgccgcggcagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413205 159 - 9440265 ----------------ACACTAggccaggtgtggtgggagctgat-cctgtcatcccagcagttttggagatcgagttgagcagattgccgagtccaggtccttacggccagcctgggcaacacggcgagacctcatctctac---aaaaattaaaaggtggcgaggcgccgcggcagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001354 159 - 21915920 ----------------ACACTAggccaggtgtggtgggggctcat-cctgtcatcccagtagttttggagatcgaggtgagcagattgccgagtccaggtccttacggccagcctgggcaacacggcgagacctcatctctac---aaaaattaaaaGGTGGCGAGGCGCCgcggcagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 135890 159 - 21531802 ----------------ACACCAggccaggtgtgctgggggctcat-cccgtcatcccagcagttttggagatcgaggtgggcagattgccgagtccaggtctttgcggccagcctgggcaacacagcgagacctcatctctac---aaaaatgaaaaggtggcgaggcgccccggcagg i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 328096 145 + 6586416 ----------------A--------------TGgtgggggcccat-cctgtcatcccagcagttttggagatcgaggtgggcagattgctgagtccaggtctttacggccagcctgggcaacacggcgagacctcatctctac---aaaaagtaaaaGGTGGCGAGCCGCCACGGCagg i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 56255 161 + 138751 ---------AAAAAAAATACCAggccaggcatg---gtggcttatgactgtaatcccagcaattttggaggtcaaagtgggcagatagttgcgcccaggtctttatggctagcctgggcaacaaagtgagacctcacctctac--aaaaaattaaaaagttac----catggtggcaga i calJac3.chrUn_GL286444 C 0 I 39 s saiBol1.JH378296 371561 176 - 2409723 AAAAAAAAAAAAAAAAATACCAggccaggcatg---gtggattatgcctgtaatcccagcaattttggaggtcaaagtgggcagatagctgcgcccaggtctttatggccagcctgggcaaaaaagtgaaacctcatctctacaaaaaaaattaaaaagtagccaagcatggtggcaca i saiBol1.JH378296 C 0 I 39 s cebCap1.NW_016107703v1 534013 164 - 2125214 ---------AAAAAAAATACCAggccaggcatg---gtggctcatgcctgtaatcccagcaattttggaggtcaaagtgggcagatagttgcgcccagatctttatggccagcctgggcaacaaagtgagaccttacctctac---aaaaattaaaaagtagccaagcacggtggcaca i cebCap1.NW_016107703v1 C 0 I 39 s aotNan1.NW_018514293v1 117835 149 + 376347 ---------CAAAAAAATACCAggccaggcatg---gtggctcatgcctgtaatcccagcaattttggaggtcaaagtgggc----------------gtctttatggccagcctgggcaacaaagtgagacctcacccccac--aaaaaattaaaaagtagccaagcatggtggcaca i aotNan1.NW_018514293v1 C 0 I 75 e otoGar3.GL873611 2266617 17 - 8137123 I e canFam3.chr6 61054332 33 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M a score=355770.000000 s hg38.chr7_KI270899v1_alt 161385 56 + 190869 a---------tcgcttgcgcccgagaggtcaaggccgcagtgagatgtgatcgcaccactgcact s panTro5.chr7_NW_015973580v1_random 37008 65 - 83720 agtggcaggatcgcttgcgcccgggaggtcaaggccgcagtgagatgtgatcgcaccactgcact i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551876 65 + 162613886 agtggcaggatcgcttgcgcccgggaggtcaaggccgcagtgagatgtgatcgcaccactgcact i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123445 56 - 432965 a---------tcgcttgcgcccaggaggtcaaggccacagtgagatgtgatcgcaccactgcact i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 181947 56 + 85365473 a---------ttgcttgcgcctgggaggtcaaggccgcagtgagacttgattgcaccactgcact i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029833 56 + 185818997 a---------ccgcttgtgcccaggaagtcaaggccgcggtgagacgtgattgccccaccgcact i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645783 56 + 192294377 a---------ccgctcgtgcccaggaagtcaaggccgcggtgagacgtgattgccccaccgcact i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413364 56 - 9440265 a---------ccgcttgtgcccaggaagtcaaggccgcggtgagacgtgattgccccaccgcact i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001513 56 - 21915920 a---------ccgcttgtgcccaggaagtcaaggccgcggtgagacgtgatcgccccaccgcact i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 136049 56 - 21531802 a---------ccgcttgtgcccaggaagtcaaggccgcggcgagctgtgatcaccccaccgcact i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 328241 56 + 6586416 a---------ccgcttgtgcccaggaagtcgaggccgcggtgagacgtgatcgccccaccgcact i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 56455 56 + 138751 a---------ttatttgcacccgggaagtcaaggctgaagtgagatgtgatcacaccattgcact i calJac3.chrUn_GL286444 I 39 C 0 s saiBol1.JH378296 371776 55 - 2409723 a---------taatttgcaccc-ggaagtcaaggctgaagtgagacgtgatcgcaccattgcact i saiBol1.JH378296 I 39 C 0 s cebCap1.NW_016107703v1 534216 56 - 2125214 a---------ttatttgcacccgggaagtcaaggctgaagtgagacatgttcgcaccattgcact i cebCap1.NW_016107703v1 I 39 C 0 e otoGar3.GL873611 2266617 17 - 8137123 I e canFam3.chr6 61054332 33 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e aotNan1.NW_018514293v1 117984 75 + 376347 I a score=263515.000000 s hg38.chr7_KI270899v1_alt 161441 47 + 190869 ccagcctgggtgacaaagtgagTCATTT---CTCTCTCTCTCTA--TCTATA s panTro5.chr7_NW_015973580v1_random 37073 47 - 83720 ccagcctgggtgacaaagtgagTCATTt---ctctctctctcta--tctctA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551941 47 + 162613886 ccagcctgggtgacaaagtgagTCATTt---ctctctctctcta--tctctA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123501 47 - 432965 ccagcctgggtgacaaagtgagTCATTt---ctctctctctcta--tctcta i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182003 40 + 85365473 ccagcctgggtgacagactgagtccgtt--------tctcTCTA----TATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029889 46 + 185818997 ccagcctgggtgac--ggtgagtccgtt--tctcTCTCTCTCTA--TCTACG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645839 46 + 192294377 ccagcctgggtgac--ggtgagtccgtt--tctcTCTCTCTCTA--TCTACG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413420 46 - 9440265 ccagcctgggtgac--ggtgagtccgtt--tctcTCTCTCTCTA--TCTACG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001569 46 - 21915920 ccagcctgggtgac--ggtgagtccgtt--tctcTCTCTCTCTA--TCTACG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 136105 48 - 21531802 ccagcccgggtgac--ggtgagtccgtttctcTCTCTCTCTCTA--TCTACG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 328297 46 + 6586416 ccagcctgggtgac--ggtgagtccgtt--tctcTCTCTCTCTA--TCTACG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 56511 50 + 138751 ccagcctggagtggagacagagTCCCCT--TCTTTCTCTCTCTCTTTCTAGA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 371831 48 - 2409723 ccatcctgggtgacagagtgagtccACT--TCTTTCTCTCTCTA--TATATA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 534272 48 - 2125214 ccagcctgggtgacagagtgagtccACT--TCTTTCTCTCTCTT--TCTATA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 118059 48 + 376347 CCAGCCTGGGTGACGG--TGAATCCACT--TCCTTCACTCTCTCTTTCTATA i aotNan1.NW_018514293v1 I 75 C 0 e otoGar3.GL873611 2266617 17 - 8137123 I e canFam3.chr6 61054332 33 - 77573801 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M a score=22341.000000 s hg38.chr7_KI270899v1_alt 161488 5 + 190869 TATA--T s panTro5.chr7_NW_015973580v1_random 37120 5 - 83720 TATA--T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551988 5 + 162613886 TATA--T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123548 5 - 432965 tatc--t i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182043 5 + 85365473 TATA--T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34029935 5 + 185818997 TATA--T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645885 5 + 192294377 TATA--T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413466 5 - 9440265 TATA--T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001615 5 - 21915920 TATA--T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 136153 5 - 21531802 TATA--T i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 328343 5 + 6586416 TGTA--T i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 56561 7 + 138751 TATATGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 371879 7 - 2409723 TATATGT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 534320 7 - 2125214 TATATGT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 118107 7 + 376347 TATATGT i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61054365 5 - 77573801 taaa--a i canFam3.chr6 I 33 C 0 e otoGar3.GL873611 2266617 17 - 8137123 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M a score=182011.000000 s hg38.chr7_KI270899v1_alt 161493 19 + 190869 AATCCAGTGAATCTAAAGC s panTro5.chr7_NW_015973580v1_random 37125 19 - 83720 AATCCAGTGAATCTAAAGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 551993 19 + 162613886 AATCCAGTGAATCTAAAGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123553 19 - 432965 AATCCAGTGAATCTAAAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 182048 19 + 85365473 AATCCAGTGAATCTAAAAC i nomLeu3.chr20 C 0 I 1100 s rheMac8.chr3 34029940 19 + 185818997 AATCCAGAGAATCTAAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645890 19 + 192294377 AATCCAGAGAATCTAAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413471 19 - 9440265 AATCCAGAGAATCTAAAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001620 19 - 21915920 AATCCAGAGAATCTAAAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 136158 19 - 21531802 AATCCAGAGAATCTAAAAC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 328348 19 + 6586416 CATCCAGTGAATCTAAAAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 56568 19 + 138751 ACCCTAGTGAATCTAAAAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 371886 19 - 2409723 AATCCAGTGAATCTAAAAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 534327 19 - 2125214 AATCCAGCGAATCTAAAAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 118114 19 + 376347 AACCCAGTGAACCTAAAAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2266634 19 - 8137123 AAACCATGGAATCTAAAAC i otoGar3.GL873611 I 17 C 0 s canFam3.chr6 61054370 18 - 77573801 aatCC-TTGACTCTAAATC i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 168980 1700 - 2515279 M a score=209390.000000 s hg38.chr7_KI270899v1_alt 161512 27 + 190869 ATTTCCACGTTAAAAGTCACAAGGATC s panTro5.chr7_NW_015973580v1_random 37144 27 - 83720 ATTTCCACGTTAAAAGTCACAAGGATC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552012 27 + 162613886 ATTTCCACGTTAAAAGTCACAAGGATC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123572 27 - 432965 ATTTCCACGTTAAAAGTCACAAGGATC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34029959 27 + 185818997 CCTTCCACGGTAAAAGTCACAAGGATC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645909 27 + 192294377 CCTTCCACGGTAAAAGTCACAAGGATC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413490 27 - 9440265 CCTTCCACGGTAAAAGTCACAAGGATC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001639 25 - 21915920 CCTTCCACGGT--AAGTCACAAGGATC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 136177 27 - 21531802 CCTTCCACGTTAAAAGTCACAAGGATC i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 328367 27 + 6586416 CCTTCCACGGTAAAAGTCACCAGGATC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 56587 27 + 138751 ACTTCCACGTTAAAAGTCACTAGGATC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 371905 27 - 2409723 ACTTCCACGTTAAAAGTCACTAGGATC i saiBol1.JH378296 C 0 I 1564 s cebCap1.NW_016107703v1 534346 27 - 2125214 ACTTCCACGTTAAAAGTCACTAGGATC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 118133 27 + 376347 ACTTGCACATTAAAAGTTACCAGGATC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2266653 27 - 8137123 AGTTCAATGTTAAAAACCAAGAGGGGC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61054388 27 - 77573801 ACCTCAATGTTAGGAATCAAGAGGATT i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e nomLeu3.chr20 182067 1100 + 85365473 I a score=613042.000000 s hg38.chr7_KI270899v1_alt 161539 99 + 190869 ATTTCAAAGGAAAAATGGACCTGAGCTACTCTCTGCCTCAGCTCAAGACCCTGCTGGGGAAATCGTTAG---GTGGAGCCTTTGCTGG----AAACAGCACC----ATCA s panTro5.chr7_NW_015973580v1_random 37171 99 - 83720 ATTTCAAAGGAAAAATGGACCTGAGCTACGCTCTGACTCAGCTCAAGACCCTGCTGGGGAAATCATTAG---GTGGAGCATTTGCTGG----AAACAGCACC----ATCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552039 99 + 162613886 ATTTCAAAGGAAAAATGGACCTGAGCTACGCTCTGACTCAGCTCAAGACCCTGCTGGGGAAATCATTAG---GTGGAGCATTTGCTGG----AAACAGCACC----ATCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123599 99 - 432965 ATTTCAAAGGAAAAATGGACCTGAGCTACGCTCTGCCTCAGCTCAAGACCCTGCTGGGGAAATCGTTAG---GTGGAGCCTTTGCTGG----AAACAGCACC----GTCA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34029986 99 + 185818997 ATTTCAAAGGAAAAATGGACCTGAGCGATGCTCGGCCTCCGCTCAAGACCCTGCTGGGGAAATGGTTAA---GTGGAGCCTTTGCTGG----AAACAGCGCC----GTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33645936 99 + 192294377 ATTTCAAAGGAAAAATGGACCTGAGCGACGCTCGGCCTCCGCTCAAGACCCTGCTGGGGAAATGGTTAA---GTGGAGCCTTTGCTGG----AAACAGCGCC----GTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413517 99 - 9440265 ATTTCAAAGGAAAAATGGACCTGAGCGACGCTCGGCCTCCGCTCAAGACCCTGCTGGGGAAATGGTTAA---GTGGAGCCTTTGCTGG----AAACAGCGCC----GTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001664 99 - 21915920 ATTTCAAAGGAAAAATGGACCTGAGCGACGCTCGGCCTCCGCTCAAGACCCTGCTGGGGAAATGGTTAA---GTGGAGCCTTTGCTGG----AAACAGCGCC----GTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 136204 99 - 21531802 ATTTCAAAGGAAAAACGGACCTGAGCGACGCTCGGCCTCAGCTCAAGTCCCTGCTGGGGAAACGGTTAA---GTGGAGCCTTTGCTGG----AAACGGCGCC----GTCA i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 328394 99 + 6586416 ATTTCAAAGGAAAAATGGACCTGAGCGACGCTCAGCCTCAGCTCAAGACCCTGCTGGGGAGATGGGTAA---GTGGAGCCTTTGCTGG----AAACAGCGCG----GTCA i colAng1.NW_012117710v1 C 0 I 62 s calJac3.chrUn_GL286444 56614 91 + 138751 ATTTCAAAGGGAAAATAGACCTGAGCTATGCTCTGCCTCAGCACAAGACCCTGCC-AGGAAATGGTTAA---GTGGAACCTTTGCTGG----AAACAGC----------- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 534373 91 - 2125214 GTTTCAAAGGGAAAATAGACCTGAGTTATGCTCTGCCTCAGTGCAAGACCATGCC-AGGAAATGGTTAA---GTGGAACCTTTGCTGG----AAACAGC----------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 118160 90 + 376347 GTTTCAAAGGGAAAATAGACCTGAGCTACGCTCTGCCTCAGCGCAAGACCCTGCC-AGGAAAT-GTTAA---GTGGAACCTTTGCTGG----AAACAGC----------- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2266680 105 - 8137123 ATTTCAAAGGGAAGATGGACCTGGGCTGTG-TCTGC--TAGGGGAAGACCCTGTGCAGGAAGCTTCAAAAGGAGGGAGGCTCTGCTGGGACCAAACAGCATGAA--GTTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61054415 100 - 77573801 ATTTCAAAGGGAA-ATGGACTTGACTTGCCCCCTGCTTCAAGG-GAGACCCTGCCTGCGAAGTCTTTAA---ATGCAGCCT-TGCTGG----AAGCAGGACACCTTGTCA i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e saiBol1.JH378296 371932 1564 - 2409723 I e nomLeu3.chr20 182067 1100 + 85365473 I a score=137230.000000 s hg38.chr7_KI270899v1_alt 161638 38 + 190869 GGTCCGCCTGTGC----------CCCAGCG----CCCGGGGAACACAGGCAT s panTro5.chr7_NW_015973580v1_random 37270 38 - 83720 GGTCCGCCTGTGC----------CCCAGCA----CCCGGGGAACGCAGGCAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552138 38 + 162613886 GGTCCGCCTGTGC----------CCCAGCG----CCCGGGGAACGCAGGCAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123698 38 - 432965 GGTCCGCCTGTGC----------CCCAGCG----CCCGGGGAACGCAGGCAT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34030085 38 + 185818997 GGTTGGCCTGTGC----------CCCCGCG----CCCGGGGAACGCAGACAT i rheMac8.chr3 C 0 I 36 s macFas5.chr3 33646035 38 + 192294377 GGTCGGCCTGTGC----------CCCCGCG----CCCGGGGAACGCAGACAT i macFas5.chr3 C 0 I 36 s macNem1.NW_012019910v1 4413616 38 - 9440265 GGTGGGCCTGTGC----------CCCCGCG----CCCGGGGAACACAGACAT i macNem1.NW_012019910v1 C 0 I 46 s cerAty1.NW_012002954v1 17001763 39 - 21915920 GGTCGGCCTGTGC----------CCCCGCGC---CCCGGGGAACGCAGACAT i cerAty1.NW_012002954v1 C 0 I 36 s chlSab2.chr28 136303 42 - 21531802 GGTCCGCCTGTGC----------CCCCGCGTGCGCCCGGGGAACACAGACAT i chlSab2.chr28 C 0 I 34 s calJac3.chrUn_GL286444 56705 26 + 138751 -----------GC----------CCCAGCA-----CCAGTGAATGCAGGCAT i calJac3.chrUn_GL286444 C 0 I 7 s cebCap1.NW_016107703v1 534464 26 - 2125214 -----------GC----------CCCAGCA-----CCAGGGAACGCAGTCAT i cebCap1.NW_016107703v1 C 0 I 7 s aotNan1.NW_018514293v1 118250 26 + 376347 -----------TC----------CCCAGCA-----CCGGGGAAGGCAGGCAC i aotNan1.NW_018514293v1 C 0 I 7 s otoGar3.GL873611 2266785 48 - 8137123 GTGCTGCCTGTGCACTAAGCAGACTCTGCG----GACGGGGACTGCATGCGC i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61054515 36 - 77573801 -GTTCAGCCCTGT----------CTTGAGG-----CCCAAGTGCATAGGTGT i canFam3.chr6 C 0 I 8 e colAng1.NW_012117710v1 328493 62 + 6586416 I e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e saiBol1.JH378296 371932 1564 - 2409723 I e nomLeu3.chr20 182067 1100 + 85365473 I a score=309205.000000 s hg38.chr7_KI270899v1_alt 161676 60 + 190869 CCCTCCCCTC-----------CGGAGGGCCTC-CCCAGGCGGTAGAGACCAGT-GCATTAGGCAG-------AGGCCTCG s panTro5.chr7_NW_015973580v1_random 37308 72 - 83720 CCCTCCCCTCTCCTCCCCTCCCAGAGGGCCTGGCCCAGGCGGTACAGACCAGT-GCATTAGGCAT-------AGGCCTTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552176 72 + 162613886 CCCTCCCCTCTCCTCCCCTCCCGGAGGGCCTGGCCCAGGCGGTACAGACCAGT-GCATTAGGCAT-------AGGCCTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123736 72 - 432965 CCCTCCCCTCCCCTCCCCTCCCGGAGGGCCTGGCCCAGGCGGTACAGACCAGT-GCATTAGGCAG-------AGGCCTCG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34030159 61 + 185818997 ccctccctcc-----------cAGAGGGCCTGCCCCAGGCGCTAGAGAACAGT-GCATTAGGCAG-------AGGTCTCA i rheMac8.chr3 I 36 C 0 s macFas5.chr3 33646109 61 + 192294377 ccctccctcc-----------cAGAGGGCCTGCCCCAGGCGCTAGAGAACAGT-GCATTAGGCAG-------AGGTCTCA i macFas5.chr3 I 36 C 0 s macNem1.NW_012019910v1 4413700 61 - 9440265 ccctccctcc-----------cGGAGGGCCTGCCCCAGGCGCTAGAGAACAGT-GCATTAGGCAG-------AGGTCTCA i macNem1.NW_012019910v1 I 46 C 0 s cerAty1.NW_012002954v1 17001838 61 - 21915920 ccctccctcc-----------cGGAGGGCCTGCCCCAGGCGCTAGAGAACAGT-GCATTAGGCAG-------AGGCCTCG i cerAty1.NW_012002954v1 I 36 C 0 s chlSab2.chr28 136379 61 - 21531802 ccctccctcc-----------cGGAGGGCCTGGCCCAGGCGCTAGAGACCAGT-GCATTAGGCAG-------AGGCCTCG i chlSab2.chr28 I 34 C 0 s colAng1.NW_012117710v1 328555 61 + 6586416 ccctccctcc-----------cGGAGGGCCTGGCCCAGGCGCTAGAGACCAGT-GCGTTAGGCAG-------AGGCCTGG i colAng1.NW_012117710v1 I 62 C 0 s calJac3.chrUn_GL286444 56738 67 + 138751 CCCTCCCCTC-----CCTTCCCAGAGGGGCTGGCCCAGGTGGTGGAGACCCAT-GCATTAGGCGG-------AGGCCTTG i calJac3.chrUn_GL286444 I 7 C 0 s cebCap1.NW_016107703v1 534497 67 - 2125214 CCCTCCCCTA-----CCGTCCCAGAGGGGATGGCTCTGGCGGTGGACACCCAT-GCATTAGGCAG-------AGGCCTCA i cebCap1.NW_016107703v1 I 7 C 0 s aotNan1.NW_018514293v1 118283 54 + 376347 CCCACCCCTC-----CCCTCCCAGAGGGGCTGGCCCAGGCGGTGGAGACCCAT-GCATTA-------------------- i aotNan1.NW_018514293v1 I 7 C 0 s otoGar3.GL873611 2266834 48 - 8137123 CCCTCCCCTC-------------AGAGGCCTG---------GTAGGGACTGGGAGCATCAGGCA----------GCCCTG i otoGar3.GL873611 I 1 I 3 s canFam3.chr6 61054559 67 - 77573801 CCCCTTCCTC-----------CAGAGCACCTAGACTGTGTGGGGGGGACCTGT-GCATTAGGCAGTCATCACATGCCTC- i canFam3.chr6 I 8 C 0 e manLeu1.NW_012101810v1 168980 1700 - 2515279 M e saiBol1.JH378296 371932 1564 - 2409723 I e nomLeu3.chr20 182067 1100 + 85365473 I a score=881967.000000 s hg38.chr7_KI270899v1_alt 161736 101 + 190869 GTCCTGCCCGGATCTGCCA---TCTCCTCGTTGTGTGGGTTCCAACCTTGC-TTTAATAGCTCCCACACCATTACC------AGGAAATGGATCCACTTACTCTGTGCGGA s panTro5.chr7_NW_015973580v1_random 37380 101 - 83720 GTCCTGCCCGGATCTGCCA---TCTCCTCATTGTGTGGGTTCCAACCTTGC-TTTAATAGCTCCCACACCATTACC------AGGAAATGGATCCGCTTACTCTGTGCGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552248 101 + 162613886 GTCCTGCCCGGATCTGCCA---TCTCCTCATTGTGTGGGTTCCAACCTTGC-TTTAATAGCTCCCACACCGTTACC------AGGAAATGGATCCGCTTACTCTGTGCGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123808 101 - 432965 GTCCTGCCCGGATCTGCCA---TCTCCTCGTTGTGTGGGTTCCAACCTTGC-TTTAATAGCTCCCACACCATTGCC------AGGAAATGGATCCACTTACTCTGTGCGGA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34030220 101 + 185818997 GTCCTGCCCGGATCCGCCA---CCTCCTCGTTGTGTGGGTTCCAGCCTTGC-TTTAATAGCTCCCACACCATTACC------AGGAAATGGATCCACTTACTCTGTGCGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33646170 101 + 192294377 GTCCTGCCCGGATCCGCCA---CCTCCTCGTTGTGTGGGTTCCAGCCTTGC-TTTAATAGCTCCCACACCATTACC------AGGAAATGGATCCACTTACTCTGTGCGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413761 101 - 9440265 GTCCTGCCCGGATCCGCCA---CCTCCTCATTGTGTGGGTTCCAGCCTTGC-TTTAATAGCTCCCACACCATTACC------AGGAAATGGATCCACTTACTCTGTGCGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17001899 104 - 21915920 ATCCTGCCCGGATCCGCCACCTCCTCCTCATTGTGTGGGTTCCAGCCTTGC-TTTAATAGCTCCCACACCATTACC------AGGAAATGGATCCACTTACTCTGTGTGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 136440 101 - 21531802 GTCCTGCCCGGATCTGCCA---CCTCCTCCTTGTGTGGGTTCCAGCCTTGC-TTTAATAGCTCCCACACCATTACC------AGGAAATGGATCCACTTACTCTATGCGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 170705 101 - 2515279 GTCCTGCCCGGATCCGCCA---CCTCCTCGTTGTGTGGGTTCCAGCCTTGC-TTTAATAGCTCCCACACCATTACC------AGGAAATGGATCCACTTACTCTGTGCGGA i manLeu1.NW_012101810v1 M 1700 C 0 s colAng1.NW_012117710v1 328616 100 + 6586416 GTCCTG-CCGGATCTGCCA---TCTCCTCGTTGTGTGGGTTCCAGCCTTAC-TTTAATAGCTCCCACACCATTACC------AGGAAATGGATCCACTTACTCTGTGCGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 56805 98 + 138751 GTTCTACCCGGGTCTGCCA---T---CTCATTGTGTGGGTTCCAGCCTAGC-TTTAATAGCACCCACACCATTACC------AGGAAATAGATCCACTTACTCTGTGCAGA i calJac3.chrUn_GL286444 C 0 I 20 s cebCap1.NW_016107703v1 534564 98 - 2125214 GTTCTACCCGGGTCTGCCA---T---CTCATTGTGTGGGTTCCAGCCTAGC-TTTAATAGCACCCACACCATTACC------AGGAAATGGATCCACTTACTCTGTGCGGA i cebCap1.NW_016107703v1 C 0 I 20 s aotNan1.NW_018514293v1 118337 89 + 376347 ---------AGGTCTGCCA---T---CTCCTTGTGTGGGTTCCAGCCTAGC-TGTAATAGCAGCCAAACCATTACC------AGGAAATGGATCCCCGTACTCTGTGCAGA i aotNan1.NW_018514293v1 C 0 I 20 s otoGar3.GL873611 2266885 94 - 8137123 CTCCTTCTAAGAGTTGTGG---TTTCCTCACTGTGTGGG-----------C-TTTAATAGC-CCCACACCATTATC-GGGGGAGGAAATGGATCCTTTCACTCTGTGCAGA i otoGar3.GL873611 I 3 I 20 s canFam3.chr6 61054626 105 - 77573801 ---CTGCCAGGGGCTGCAA---TTTCCTCCTTGTGTGGGTTCCAGCCTTGCTTTTAATAGCACCCACACCATTACCAGGAGGAGGAAATGGGCCCACTTACTCTGTGCAGA i canFam3.chr6 C 0 C 0 e saiBol1.JH378296 371932 1564 - 2409723 I e nomLeu3.chr20 182067 1100 + 85365473 I a score=4342655.000000 s hg38.chr7_KI270899v1_alt 161837 434 + 190869 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATCCCAGCGTCATTCGCAGTGCCTCCATCTCAAAATCTCCTTAATGCC-AAAGGCGGTAATGGGTGTCTGCTGTGCCTGCCTAATGAGCTGTAAAATGAACCAGTGGGTGATTTGTTTCTTGCCGTCAAGACCCTGGTTAAGTGACGGCCAGGACGGTGGAAGGAAGGCCGGGGGTCCTGTCCCCCAGACGGCA-CTCCAGACATCAGGCTCTCGGATCACAATTGATTCAAAGGTAAAAACACGTTCATGC-----ACACACCTGGTTTTCCATTCTCTTAACA-TTTTTTTCTCCATAATTAGTTTCTCCAGCATCATCTTGGGAGAATGTTGA-CGTCACTGATCTTGGTTTCTCGGATGGTGATGAATCTGGGCAGGGGGCTGGAGTGGAACCTGCCAGCCCC s panTro5.chr7_NW_015973580v1_random 37481 434 - 83720 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATCCCAGCGTCATTCGCAGTGCCTCCATCTCAAAATCTCCTTAATGCC-AAAGGCGGTAATGGGTGTCTGCTGTGCCTGCCTAATGAGCTGTGAAATGAACTAGTGGATGATTTGTTTCTTGCCATCAAGACCCTGGTTAAGTAACGGCCAGGACGGCGGAAGGAAGGCCGGGGGTCCTGTCCCCCAGACGGCA-CTCCAGACATCAGGCTCTCTGATCACAATTGATTCAAAGGTAAAAACACGTTTGTGC-----ACACACCTGGTTTTCCATTCTCTTAACA-TTTTTTTCTCCATAATTAGTTTCTCCAGCATCATCTTGGGAGAATGTTGA-CGTCACTGATCTTGGTTTCTCGGATGGTGATGAATCTGGGCAGGGGGCTGGAGTGGAACCTGCCAGCCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552349 434 + 162613886 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATCCCAGCGTCATTCGCAGTGCCTCCATCTCAAAATCTCCTTAATGCC-AAAGGCGGTAATGGGTGTCTGCTGTGCCTGCCTAATGAGCTGTAAAATGAACCAGTGGATGATTTGTTTCTTGCCATCAAGACCCTGGTTAAGTAACGGCCAGGACGGCGGAAGGAAGGCCGGGGGTCCTGTCCCCCAGACGGCA-CTCCAGACATCAGGCTCTCTGATCACAATTGATTCAAAGGTAAAAACACGTTCGTGC-----ACACACCTGGTTTTCCATTCTCTTAACA-TTTTTTTCTCCATAATTAGTTTCTCCAGCATCATCTTGGGAGAATGTTGA-CGTCACTGATCTTGGTTTCTCAGATGGTGATGAATCTGGGCAGGGGGCTGGAGTGGAACCTGCCAGCCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 123909 434 - 432965 --------------------TGAGAATTCCATTAATGTTCACTCTGACCTTTGCTAATCCCAGCGTCATTCGCAGTGCCTCCATCTCAAAATCTCCTTAATGCC-AAAGGCGGTAATGGGTGTCTGCTGTGCCTGCCTAATGAGCTGTAAAATGAACCAGTGGGTGATTTGTTTCTTGCCGTCAAGACCCTGGTTAAGTAACGGCCAGGACGGCGGAAGGAAGGCCGGGGGTCCTGTCCCCCAGACGGCA-CTCCAGACATCAGGCTCTCTGATCACAGTTGATTCAAAGGTAAAAACACGTTCGTGC-----ACACACCTGGTTTTCCATTCTCTTAACA-TTTTTTTCTCCATAATTAGTTTCTCCAGCATCATCTTGGGAGAATGTTGA-CGTCACTGATCTTGGTTTCTCGGATGGTGATGAATCTGGGCAGGGGGCTGGAGTGGAACCTGCCAGCCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 183167 432 + 85365473 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATTCCAGCGTCATTAGCAGTGCCTACATCTCAAAATCTCCTTAATGCCAAAAGGCAGTAATGGGTGTCTGCTGTGCCTGCCTAACGAGCTGTAAAATGAACCGGTGGGTGATTTGTTTCTTGCCGTCAGGACCCTGGTTAAGTAACGGCCAGGACAGCGGAAGGAAGGCCAGGCGTCCTGTCCCCCAGACAGCA-GTCCAGAGA-CAGGCTCCCTGATCACAATTGATTCACAGGTAAAAACATGTTCGTGC-----ACACACCTGGTTTTCTATTCTCTTAACA-TTTTTTTCTCCATAATTAGTTTCTCCAGCATCATCTTGGGAGAATGTTGA-TGTCACTGATCTTGGTTTCTCGGGTGGTGATGAATCTGGAC--GGGGCTGGAGTGGAGCCTGCCAACCCC i nomLeu3.chr20 I 1100 I 181 s rheMac8.chr3 34030321 434 + 185818997 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATTCCAGCGTCATTAGTGGTGCCTACGTCTCCAAATCTCCTTAATGCC-AAAGGCAGTAATGGGCGTCTGCTGTGCCTGCCTAATGAGCTGTAAAACGAACCAGTGGGTGATTTGTTTCTTGCCGTCAAGACCCTGGTTAAGTAACAGCCAGGACGACGGAAGGAAGGCCGGGCGTCCTGTCCCCCGGACAGCA-CTCTGGACATCAGGCTCTCTGATCACAATCAATTCAAAGGTAAAACTAGGTTTGTGC-----ACACACCTGGTTTTCCAGTCTCTTAACA-TTTTTTTCTCCGTCATTAGTTTCTCCATCATCGTCTTGGGAGAATGTTGA-CGTCACCAATCTTTGTTTCTCGGGTGGTGATGAATCTGGGCAGGGGGCTGGAGTGGAGCCTGTTAGCCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33646271 434 + 192294377 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATTCCAGCGTCATTAGTGGTGCCTACGTCTCCAAATCTCCTTAATGCC-AAAGGCAGTAATGGGCGTCTGCTGTGCCTGCCTAATGAGCTGTAAAACGAACCAGTGGGTGATTTGTTTCTTGCCGTCAAGACCCTGGTTAAGTAACAGCCAGGACGACGGAAGGAAGGCCGGGCGTCCTGTCCCCCGGACAGCA-CTCTGGACATCAGGCTCTCTGATCACAATCAATTCAAAGGTAAAACTAGGTTTGTGC-----ACACACCTGGTTTTCCAGTCTCTTAACA-TTTTTTTCTCCGTCATTAGTTTCTCCATCATCGTCTTGGGAGAATGTTGA-CGTCACCAATCTTTGTTTCTCGGGTGGTGATGAATCTGGGCAGGGGGCTGGAGTGGAGCCTGTTAGCCGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4413862 434 - 9440265 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATTCCAGCATCATTAGTGGTGCCTACGTCTCCAAATCTCCTTAATGCC-AAAGGCAGTAATGGGCGTCTGCTGTGCCTGCCTAATGAGCTGTAAAACGAACCAGTGGGTGATTTGTTTCTTGCCGTCAAGACCCTGGTTAAGTAACAGCCAGGACGACGGAAGGAAGGCCAGGCGTCCTGTCCCCCGGACAGCA-CTCCGGGCATCAGGCTCTCTGATCACAATCAATTCAAAGGTAAAACTAGGTTTGTGC-----ACACACCTGGTTTTCCAGTCTCTTAACA-TTTTTTTCTCCGTCATTAGTTTCTCCATCATCGTCTTGGGAGAATGTTGA-CGTCACCAATCTTTGTTTTTCGGGTGGTGATGAATCTGGGCAGGGGGCTGGAGTGGAGCCTGTTAGCCGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002003 434 - 21915920 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATTCCAGCGTCATTAGCAGTGCCTACGTCTCCAAATCTCCTTAATGCC-AAAGGCAGTAATGGGCGTCTGCTGTGCCTGCCTAATGAGCTGTAAAACGAACCAGTGGGTGATTTGTTTCTTGCCGTCAAGACCCTGGTTAAGTAACAGCCAGGACGACGGAAGGAAGGCCGGGCGTCCTGTCCCCCGGACAGCA-CTTCGGACATCAGGCTCTCTGATCACAATCAATTCAAAGGTAAAACTAGGTTTGTGC-----ACACACCTGGTTTTCCAGTCTCTTAACA-TTTTTTTCTCCGTCATTAGTTTCTCCATCATCATCTTGGGAGAATGTTGA-CGTCACCGATCTTTGTTTCTCGGGTGGTGATGAATCTGGGCAGGGGGCTGGAGTGGAGCCTGTTAGCCGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 136541 433 - 21531802 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATTCCAGCGTCATTAGCAGTGCCTACGTCTCCAAATCTCCTTAATGGC-AAAGGCAGTAATGGGTGTCTGCTGTGCCTGCCTAATGAGCTGTAAAACGAACCAGTGGGTGATTTGTTTCTTGCCGTCAAGACCCTGGTTAAGTAACAGCCAGGACGGCGGAAGGAAGGCCGGGCGTCCCGTCCCCC-GACAGCA-CTCCGGACATCAGGCTCTCTGATCACAATTGATTCAAAGGTAAAACTAGGTTTGTGC-----ACACACCTGGTTTTCCAGTCTCTTAACA-TTTTTTTCTCCATCATTAGTTTCTCCGTCATCGTTTTGGGAGAATGTTGA-CGTCACCGATCTTTGTTTCTCGGGTGGTGATGAATCTGGGCAGGGGGCTGGGGCGGAGCCTGCCAGCCGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 170806 434 - 2515279 --------------------TGAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATTCCAGCGTCATTAGCAGTGCCTACGTCTCCAAATCTCCTTAATGCC-AAAGGCAGTAATGGGCGTCTGCTGTGCCTGCCTAATGAGCTGTAAAACGAACCAGTGGGTGATTTGTTTCTTGCCGTCAAGACCCTGGTTAAGTAACAGCCAGGACGACGGAAGGAAGGCCGGGCGTCCTGTCCCCCGGACAGCA-CTCCGGACATCAGGCTCTCTGATCACAATCAATTCAAAGGTAAAACTAGGTTTGTGC-----ACACACCTGGTTTTCCAGTCTCTTAACA-TTTTTTTCTCCGTCATTAGTTTCTCCATCATCATCTTGGGAGAATGTTGA-CGTCACCGATCTTTGTTTCTCGGGTGGTGATGAATCTGGGCAGGGGGCTGGAGTGAAGCCTGTTAGCCGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 328716 439 + 6586416 --------------------TGAGAATTCCATTAACGTTCGCTCTGACCTTTGCTAATTCCAGCGTCATTAGCAGCGCCTACGTCTCCAAATCTCCTTAATGCC-AAAGGCAGTAATGGGTGTCTGCTGTGCCTGCCTAATGAGCTGTAAAACGAACCAGTGGGTGATTCGTTTCTTGCCGTCAAGACCCTGGTTTAGTAACAGCCAGGACGGCGGAAGGAAGGCCGGGCGTCCTGTCCCCCGGACAGCA-CTCCAGACATCAGGCTCTCTGATCACAATCGATTCAAAGGTAAAACTGTGTTTGTGCACACAACACACCTGGTTTTCCATTCGCTTAACA-TTTTTTTCTCCGTCATTAGTTTCTCCGTCATCATCTTGGGAGAATGTTGA-CGTCACCGATCTTTGCTTCTCGGGTGGTGATGAATCTGGGCAGGGGGCTGGAGCAGAGCCTGCCAGCCGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 56923 430 + 138751 --------------------TGAGAATTCCATTAAGGTTCACTGTGACCTTTGCTAATTCCAGTGTCATTAGCAGTGCCTACATCTCCAAATCTCCTTGATGCCAAAAGGCAGTAATGGGTGTCTGCTGTGCCTGCTTAATGAGCTATAAAATGAACCAGTGGGTGATTTGTTTCTTGCTGTCAAGACCCTGGTTAAGTAACAGCCAGGACGGCAGAAGGAAGGCCGCATGTCCTGTCACCCAGACGGCA-CTCCAGACATCGGCCTCTCTAATCACAATGGATTCAAAGGTAAAAATATGTTCATGC-----ACACACCTTGTTTTCCATTCCCTTCACA--TTTTTTCTCCATGATTAGTTTCTCCATCATCATCTTGGGAGAATGTTGA-CATCACCCACCTTTGTTTCTCAGATGGTGATGAATCGGCA----GGGCTGGAGTGGAGCATGCCAGCACC i calJac3.chrUn_GL286444 I 20 C 0 s cebCap1.NW_016107703v1 534682 431 - 2125214 --------------------TGAGAATTCCATTAAGGTTCGCTCTGACCTTTGCTAATTCCATTGTCATTAGCAGTGCCTACGTCTCCAAATCTCCTTCATGCCAAAAGGCAGTAATGGGTGTCTGCTGTGCCTGCTTAATAAGCTGTAAAATGAACCAGTGTGTGATTTGTTTCTTGCCGTCAAGAGCCTGGTTAAGTAACAGCCTGGAGAGCAGAAGGAAGGCCGCACGACCTGTCACCCAGACGGCA-CTCCAGACATTGGCCTCTCTAA-CACAGTGGATTCAAAGG-AAAACCATGTTCATGC-----ACACACCTCATTTTCCATTCCCGTCACA--TTTTTTCTCCATGATTAGTTT-TTTATCATCATCTTGGGAGAATGTTGA-CGTCACTGACCTTTGTTTCTCAGATGGTGATGAATCTGGACAGGGGGCTGGAATGGAGCATGCCAGCACC i cebCap1.NW_016107703v1 I 20 C 0 s aotNan1.NW_018514293v1 118446 414 + 376347 --------------------TGAGAATTCCATTAAGGTTCGCTCTGACCTTTGCTAATTCCAGTGTCATTAGCAGTGCCTACGTCTCCAAATCTCCTTGATGCCAAAAGGCAGTAACGGGTGCCTTCGGTGCCTGCTTAATGAGCTGTAAAATGGACCAGTGGGTGATTTGTTTCTTGCCATCAAGACCCTGGTTAAGTAGCAGCCAGGCCAGCGGAAGGAAGGCCGCACGTCCTATCGCCCAGACGGCA-CTCCAGACGTCGGCCTCTCTAATCACAACGGATTCAAAGGTAAAAATATGTTCATGC-----ACACACCTCGTTTTCCATTCCCTTCACA--TTTTTTCTCCATGATTAGTTTATCCATCGTCATCTTGGGAGAA--------------------TGTTTCTCAGATGGCGATGAATCTGGGCAG-GGCTTGGAGTGGAGCGTGCCGGCACC i aotNan1.NW_018514293v1 I 20 C 0 s otoGar3.GL873611 2266999 428 - 8137123 --------------------TAAGAATTCCATTAATGTTCGCTCTGACCTTTGCTAATTCCAGCGTCATTAGCAGTGCATACGTTTCAAAATCTCCTTAATGCCAAAAAGCAGTAATGGGTGTCTGCTGTGCTTACTTAATGAGCCATAAAATGAACCAGTGGATGATTTGTTTCTTGCCGTCAAGCCACTGGTTAAGTAATGGCCAGGATGGAGGAAGGAAGGCGATGCGTCTTGTCACCCAGACAACA-CTGAAGGCATC-GGCTTTCCTATCACAATTGATT-ACAGGTAAAAGCATCTATGTGC-----ACACACCTCGTTTTCCATTATCTTAA-A-CTTTTTTCTCAGTAATTAGTTTCTCCATCATCATTTTTGCAGGATGTTAG-CATCATTGATCTTTGTTTCTAGGATTATGATAAACCTGAACCG----CTTAAGCAGAGGCTGTACCCCTC i otoGar3.GL873611 I 20 C 0 s canFam3.chr6 61054731 437 - 77573801 TAAGAATTCCATTAATGTTCTAAGAATTCCATTAACGTTTGCTCTGACCTTTGCTAATTCCAGCATCATTAGCAGTGCATACGTTTCAAAATCTCCTTAATGCCAAAAAGCAGTAATGGGTGTCTGCTATGCTTGCTTAATGAGCCATAAAATGAACCAGTGGGTGATGTGTTTCTTGCCATCAAGCCCCTGGTTAAGTAATGGCCAGGCCGGTGGAATG-AGGCTATGCATCTTGTCA-CCAGACAGCAGCTCAAGGCACTGGCTTTTCTAATCACAATTGATTAAAAGGTAAAAATATTTATATGC-----ACCCACCTTATTTTCCATTATCTTAAAAAAATTTTTCTCAGTAATTAGTTTCTCCATCATCATTTTGAGAGAATGTTTACCATCATTGATCTTTGTTTCTTTAATTATGATAGATCCTCATGGGAGGCT-----------------CC-- i canFam3.chr6 C 0 C 0 e saiBol1.JH378296 371932 1564 - 2409723 I a score=743118.000000 s hg38.chr7_KI270899v1_alt 162271 88 + 190869 TCCTCAGCCCGGGCGCCCGACCTCAGCTCCCTCCAGCCCTGGA--CTCT--GTTTTCTTCCAAGACTG-----GGCCCTGCTTCCCTGCACCACGGT s panTro5.chr7_NW_015973580v1_random 37915 88 - 83720 TCCTCAGCCCGGGCGCCCGACCTCAGCTCCCTCCAGCCCTGGA--CTCT--GTTTTCTTCCAAGACTG-----GGCCCTGCTTCCCTGCACCACGGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552783 88 + 162613886 TCCTCAGCCCGGGCGCCCGACCTCAGCTCCCTCCAGCCCTGGA--CTCT--GTTTTCTTCCAAGACTG-----GGCCCTGCTTCCCTGCACCACGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124343 87 - 432965 TCCTCAGCCCGGGCGCCCGACCTCGGCT-CCTCCAGCCCTGGA--CTCT--GTTTTCTTCCAAGGCTG-----GGCCCTGCCTCCCTGCACCACGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 183780 90 + 85365473 tCCTCAGCCCAGGCGCCCGACCTCGGCTCCCTCCGGCCCTGGA--CTCTCCGTTTTCCTCCCAGACTG-----GGCCCTGCGCCCCTGCACCACGGT i nomLeu3.chr20 I 181 C 0 s rheMac8.chr3 34030755 88 + 185818997 TCCTCAGCCCGGGCGCCCGATCTCGGCTCCCTCCAGCCCTGGA--CTCT--GTTTTCCTCCCAGACTG-----GGCTCTGCCGCCCTGCACCACGGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33646705 88 + 192294377 TCCTCAGCCCGGGCGCCCGATCTCGGCTCCCTCCAGCCCTGGA--CTCT--GTTTTCCTCCCAGACTG-----GGCTCTGCCGCCCTGCACCACGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414296 88 - 9440265 TCCTCAGCCTGGGCGCCCGATCTCGGCTCCCTCCAGCCCTGGA--CTCT--GTTTTCCTCCCAGACTG-----GGCTCTGCCGCCCTGCACCACGGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002437 88 - 21915920 TCCTCAGCCCGGGCGCCCGATCTCGGCTCCCTCCAGCCCTGGA--CTCT--GTTTTCCTCCCAGACTG-----GGCTCTGCCGCCCTGCACCACGGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 136974 87 - 21531802 TCCTCAGCCCGGGCG-CCGACCTCGGCTCCCTCCAGCCCTGGA--CTCT--GTTTTCCTCCCGGACTG-----GGCTCTGCCGCCCTGCACCACGGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171240 88 - 2515279 TCCTCAGCCCGGGCGCCCGATCTCGGCTCCCTCCAGCCCTGGA--CTCT--GTTTTCCTCTCAGACTG-----GGCTCTGCCGCCCTGCACCACGGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329155 90 + 6586416 TCCTCAGCCCGGGCGCCCGACCTCGGCTCCCTCCAGCCCTGGACTCTCT--GTTTTCCTCCCAGACAG-----GGCTCTGCCGCCCTGCACCACGGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57353 88 + 138751 TCCTCAGCCTGGGCGCCCGACCTTGGCTCCCTCCAGCCCTGGG--CTCT--GTTTTCCTTCCAGACTT-----GGCCCTGAGCCCCTGCACCACACT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 535113 87 - 2125214 TCCTCAGCCTGGGCGCCTGACCTTGGCTCCCTCCAGCCCTGGG--CTCT--GTTTTCCTTCCAGACTT-----GGCCCTGCG-CCCTGCACCACACT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 118860 87 + 376347 TCCTCAGCCTGGGCGCCCGACCTTGGCTCCCTCCAGCCCTGGG--CTCT--GTTTTCCTTCCAGACGT-----GGCCCTGCG-CCCTGTACCACACT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2267427 83 - 8137123 CCACTGGCCCTGTGCCCCGTGCACACCTCC------CCCTGGG--------GCTCCCCTCTCAGCCAGCCACCTGCTCTGTCTCACCTCGCCCCTGT i otoGar3.GL873611 C 0 I 376 s canFam3.chr6 61055168 68 - 77573801 -------CCCAGAGGCTGGGCCTT---CCTCCTCAGGACCAGC--CCCT--ACCTCCTTCCCTGA--G-----GACCCAGCTCCCCTGT-------- i canFam3.chr6 C 0 C 0 e saiBol1.JH378296 371932 1564 - 2409723 I a score=333300.000000 s hg38.chr7_KI270899v1_alt 162359 52 + 190869 CCGCCTGGATCCTGCACACCCAGCCCGGTGGCTCC---TGCCCACTCAGCGGGGC s panTro5.chr7_NW_015973580v1_random 38003 52 - 83720 CCGCCTGGATCCTGCACACCCAGCCCGGTGGCTCC---TGCCCACTCAGCAGGGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552871 52 + 162613886 CCGCCTGGATCCTGCACACCCGGCCCGGTGGCTCC---TGCCCACTCAGCAGGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124430 52 - 432965 CCGGCTGGATCCTGCACACCCGGCCCGGTGGCTCC---TGCCCACTCAGCGGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 183870 45 + 85365473 CCACCTGGATCCTGCACACCCGGCCCGGCGG----------CCACTCAGCGGAGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34030843 52 + 185818997 CTGCCTGGATCCTGCACACGCGGCCCTGCGGCTTC---TGCCCACTCGGCAGGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33646793 52 + 192294377 CTGCCTGGATCCTGCACACGCGGCCCTGCGGCTTC---TGCCCACTCGGCAGGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414384 52 - 9440265 CTGCCTGGATCCTGCACACGCGGCCCTGCGGCTTC---TGCCCACTCGGCAGGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002525 52 - 21915920 CTGCCTGGATCCTGCACACGCGGCCCTGCGGCTTC---TGCCCACTCGGCAGGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137061 33 - 21531802 CTGCCTGGATCCTGCACACCCGGCCCTGCGGCT---------------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171328 52 - 2515279 CTGCCTGGATCCTGCACACGAGGCCCTGCGGCTTC---TGCCCACTCGGCAGGGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329245 52 + 6586416 CTGCCTGGATCCTGCACACCCGGCCCTGCGGCTCC---TGCCCACTCGTTGGGGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57441 47 + 138751 CCGCCTGGACCCTGCACACCCAGTCCTGCAGCT--------CCACTCAGCGGGGC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 535200 47 - 2125214 CTGCCTGGACCCTGCACACCCGGTCCTGCAGCT--------CCACTCCGCAGGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 118947 47 + 376347 CCGCCTGGACCCTGCACACCCGGTCCTCTGGCT--------CCACTCAGCGGGGC i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61055236 43 - 77573801 CAGCTT------------CCCTGCTCAGCTTCTCCGTTCTCCTGCCAGTCAGGGC i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2267510 376 - 8137123 I e saiBol1.JH378296 371932 1564 - 2409723 I a score=18984.000000 s hg38.chr7_KI270899v1_alt 162411 9 + 190869 --------CCTGACGC-C s panTro5.chr7_NW_015973580v1_random 38055 9 - 83720 --------CCTGACGC-C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552923 9 + 162613886 --------CCTGACAC-C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124482 9 - 432965 --------CCTGACGC-C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 183915 9 + 85365473 --------CCTGACGC-C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34030895 9 + 185818997 --------CCTGACGC-T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33646845 9 + 192294377 --------CCTGACGC-T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414436 9 - 9440265 --------CCTGACAC-T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002577 9 - 21915920 --------CCTGACGC-T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137094 1 - 21531802 -----------------C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171380 9 - 2515279 --------CCTGACGC-T i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329297 9 + 6586416 --------CCTGACGC-C i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57488 8 + 138751 --------CCTCATGC-- i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 535247 8 - 2125214 --------CCTCATGC-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 118994 9 + 376347 --------CCTCACGCC- i aotNan1.NW_018514293v1 C 0 I 45 s otoGar3.GL873611 2267886 9 - 8137123 --------CCTGAAAC-C i otoGar3.GL873611 I 376 C 0 s canFam3.chr6 61055279 14 - 77573801 CCCACACAGCTGGC---- i canFam3.chr6 C 0 C 0 e saiBol1.JH378296 371932 1564 - 2409723 I a score=484786.000000 s hg38.chr7_KI270899v1_alt 162420 69 + 190869 CTACATCTCCTCTGTGAGCAAAAGC--TCTCTTGTTGTTAGAGAG--ACTTGCGGAAGCCACACACCCATAGA s panTro5.chr7_NW_015973580v1_random 38064 69 - 83720 CTACATCTCCTCTGTGAGCAAAAGC--TCTCTTGTTGTTAGAGAG--ACTTGCGGAAGCCACACACCCATAGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 552932 69 + 162613886 CTACATCTCCTCTGTGAGCAAAAGC--TCTCTTGTTGTTAGAGAG--ACTTGCGGACGCCACACACCCATAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124491 69 - 432965 CTACATCTCCTCTGTGAGCAAAAGC--TCTCTTGTTGTTAAAGAG--ACTTGCGGAAGCCACACATCCATAGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 183924 69 + 85365473 CTATGTCTCCTCTGTGAGCAAAAGC--TCTCTTGTTGTTAAAGAG--ACTTGCAGAAGCCACACACCCATAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34030904 66 + 185818997 CTACGTCTCCTCTGTGGGCGAAAGC--TCTC---TTGTTAAAGAG--ACTTGCAGAAGCCACACACCTACCGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33646854 66 + 192294377 CTACGTCTCCTCTGTGGGCGAAAGC--TCTC---TTGTTAAAGAG--ACTTGCAGAAGCCACACACCTACCGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414445 66 - 9440265 CTACGTCTCCTCTGTGGGCGAAAGC--TCTC---TTGTTAAAGAG--ACTTGCAGAAGCCACACACCTACCGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002586 66 - 21915920 CTACGTCTCCTCCGTGGGCGAAAGC--TCTC---TTGTTAAAGAG--ACTTGCAGAAGCCACACACCTACCGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137095 66 - 21531802 CCACGTCTCCTCTGTGGGCGAAAGC--TCTC---TTGTGAAAGAG--ACTTGCGGAAGCCACACACCCACCGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171389 66 - 2515279 CTACGTCTCCTCCGTGGGCGAAAGC--TCTC---TTGTTAAAGAG--ACTTGCAGAAGCCACACACCTACCGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329306 66 + 6586416 CTATGTCTCCTCTACAGGCGAAAGC--TCTC---TTGTGAAAGAG--ACTTGCGGAAGCCACACACCCACCGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57496 69 + 138751 TTACAGGTCCTCTCTGAGCAAAAGC--TATCTTATTGTTAAAGAG--ACTTGCAAAAGCCACACACCCGTAGT i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 535255 69 - 2125214 CTACAGGTCCTCTGTGAGCAAAAGC--TATCTTGTTGTTAAAGAG--ACTTGCAAAAGCCACACACCAGTAGT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2267895 73 - 8137123 TTTCATCTCTTCTGTGAGCAAAACCTGTGTCTTTTTGTTAAAGAGAAATTTGAGAAAACAACCTACCCATAAT i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61055293 72 - 77573801 CCAAGTCTC-TGTGTTAACAAAGCCTGTATCTTTTCATTAAGGAGAAATGTGAGAAAAGCGCACACCCCAAAT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 119003 45 + 376347 I e saiBol1.JH378296 371932 1564 - 2409723 I a score=11020.000000 s hg38.chr7_KI270899v1_alt 162489 2 + 190869 CC s panTro5.chr7_NW_015973580v1_random 38133 2 - 83720 CC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553001 2 + 162613886 CC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124560 2 - 432965 CC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 183993 2 + 85365473 CT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34030970 2 + 185818997 CT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33646920 2 + 192294377 CT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414511 2 - 9440265 CT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002652 2 - 21915920 CT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137161 2 - 21531802 CT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171455 2 - 2515279 CT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329372 2 + 6586416 CT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57565 2 + 138751 CT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 373496 2 - 2409723 cc i saiBol1.JH378296 I 1564 C 0 s cebCap1.NW_016107703v1 535324 2 - 2125214 CT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2267969 1 - 8137123 C- i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61055365 2 - 77573801 CT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 119003 45 + 376347 I a score=531219.000000 s hg38.chr7_KI270899v1_alt 162491 63 + 190869 GTTACTTCTACACATTCTTTTTATTTCACACAGATCTGCA-------TCCCTT-------GAAGTACTCACGGGGAC s panTro5.chr7_NW_015973580v1_random 38135 63 - 83720 GTTACTTCTACACATTCTTTTTATTTCACACAGATCTGCA-------TCCCTT-------GAAGTACTGACGGGGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553003 63 + 162613886 GTTACTTCTACACATTCTTTTTATTTCACACAGATCTGCA-------TCCCTT-------GAAGTACTGACGGGGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124562 63 - 432965 GTCACTTTGACACATTCTTTTTATTTCACACAGATCTGCA-------TCCCTT-------GAAGTACTCACGGGGAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 183995 63 + 85365473 GTTACTTTGACACATTCTTTTTACTTCACACAGATCTGCG-------TCCCTT-------GAAGTACTCACCGGGAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34030972 64 + 185818997 GTTACTTTGACACATACTTTTTATTTCATACAGATCTACAT------TCCCTT-------GAAGTGCTCACGGGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33646922 64 + 192294377 GTTACTTTGACACATACTTTTTATTTCATACAGATCTACAT------TCCCTT-------GAAGTGCTCACGGGGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414513 64 - 9440265 GTTACTTTGACACATACTTTTTATTTCATACAGATCTACAT------TCCCTT-------GAAGTGCTCAGGGGGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002654 64 - 21915920 GTTACTTTGACACATTCTTTTTATTTCATACAGATCTACAT------TCCCTT-------GAAGTGCTCACGGGGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137163 64 - 21531802 GTTACTTTGACACATTCTTTTTATTTCACACAGACCCACAC------TCCCTT-------GAAGTGCTCACGGGGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171457 64 - 2515279 GTTACTTTGACACATTCTTTTTATTTCATACAGATCTACAT------TCCGTT-------GAAGTGCTCATGAGGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329374 64 + 6586416 GTTACTTTGACACGTTCTTTTTATTCCACACAGATCTACAC------TCCCTT-------GAAGTGCTCATGGGGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57567 63 + 138751 GTTACTTTGACACGTTCTTTTTACCTCACCCATGTCTGCA-------TCCCTT-------GAAGTGCTCAGAGGGAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 373498 60 - 2409723 ggcACTTTGACACA---TTTTTATCTCACCCATGTCTGCG-------TCCCTT-------GAAGTGCTCATGGGGAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 535326 63 - 2125214 GTTACTTTGACACATTCTTTTTACCTCACCCATGTCTGCA-------TCCCTT-------GAAGTGCTCACGGGGAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 119048 63 + 376347 GTTACTTTGACACATTCTTTTTACCTCACCCATGTCTGCG-------TCCCTT-------GAAGTGCTCATGGGGAC i aotNan1.NW_018514293v1 I 45 I 46 s otoGar3.GL873611 2267970 59 - 8137123 -----TTTAACATACTGTTCTGTGTCTCTTGACATCTACT-------CCCATTTTCAGTAGAAATGCAGAT------ i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61055367 66 - 77573801 GTTACTCTACCACATTTTTTTT--TTTACATTTGCTTACATCAAGTAGCATTT-------TTAGTAC--ATGCAGAC i canFam3.chr6 C 0 C 0 a score=745077.000000 s hg38.chr7_KI270899v1_alt 162554 110 + 190869 GTATTCCGCATGGTTTCCATCTTAGTGCACATAGAACACGGTTTTAACTTACAATCGGCACTGTCTTCTCAAGATCT--GTCACTTTGAAAA-CGTCATTGCCAATAATTGTA s panTro5.chr7_NW_015973580v1_random 38198 110 - 83720 GTATTCCGCGTGGTTTCCATCTTAGTGCACATAGAACACGGTTTTAACTTACAATCGGCACTGTCTTCTCAAGATCT--GTCACTTTGAAAA-TGTCATTACCAATAATTGTA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553066 110 + 162613886 GTATTCTGCGTGGTTTCCATCTTAGTGCACATAGAACACGGTTTTAACTTACAATCGGCACTGTCTTCTCAAGATCT--GTCACTTTGAAAA-TGTCATTGCCAATAATTGTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124625 108 - 432965 GTATTCCACGTGGTTTCCATCTTAGT-CACATAGAAC-TGGTTTTAACTTACAATCGGCACTGTCTTCTCAAGATCT--GTCACTTTGAAAA-CGTCATTGCCAATAATTGTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184058 110 + 85365473 GTGTTCCACGTGGTTTCCGTCTTAGTGCACATGGAACACGGTTTTAACTTATAATCGGCACTGTCTTCTCAAGATCT--GTCGCTTTGAAAA-CGTCATTGCCAATAACTGTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34031036 94 + 185818997 GTATCCTGCGTGGTTTCCGTCTTAGTGTACGTGGAAC----------------GTCAGCACTGTCTTCTCGAGATCT--GTCATTTTGAAAT-TGTCATTGCCAATAATTGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33646986 94 + 192294377 GTATCCTGCGTGGTTTCCGTCTTAGTGTACGTGGAAC----------------GTCAGCACTGTCTTCTCGAGATCT--GTCATTTTGAAAT-TGTCATTGCCAATAATTGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414577 94 - 9440265 GTATCCTGCGTGGTTTCCATCTTAGTGTACGTGGAAC----------------GTCAGCACTGTCTTCTCGAGATCT--GTCATTTTGAAAT-TGTCATTGCCAATAATTGTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002718 94 - 21915920 GTATCCTGCGTGGTTTCCGTCTTAGTGTACGTGGAAC----------------GTCAGCACTGTCTTCTCGAGATCT--GTCATTTTGAAAT-TGTCATTGCCAATAATTGTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137227 94 - 21531802 GCACCCTGCGTGGTTTCTGTCTTAATGCACGTGGAAC----------------ATCGGCGCTGTCTTCTCGAGATCT--GTCATTTTGAAAA-CGTCGTTGCCGATGATTGTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171521 94 - 2515279 GTATCCTGCGTGGTTTCCGTCTTAGTGTACGTGGAAC----------------GTCAGCACTGTCTTCTCGAGATCT--GTCATTTTGAAAT-TGTCATTGCCAATAATTGTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329438 94 + 6586416 GTGTCCTGCGTGGTTTCTGTCTTAGTGCACGTGGAAC----------------GTCGGCACTGTCTTCTCGAGATCT--GTCATTCTGAAAA-CGTCATTGCCGGTAATTGTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57630 108 + 138751 -ATTTCTTTGTGGCTTCTGTCTTAGTGCACATAAAATGTGGTTTTAACTTATAATTGGTATGATATTGTCAAGATCT--GTCATTTTGAAAACTGTCA--GTCAATCATTGCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 373558 110 - 2409723 -ATTTTTATGTGGCTTCTGTTTTAGTGCACATACAATGTGGTTTTAACTTATAATTGGCATGATATTGTCAAGATCT--GACGTTTTGAAAACTGTCATTGTCAATCATTGCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 535389 110 - 2125214 -ATTTCTATGTGGCTTCTGTCTTAGTGCACACAAAATGTGGTTTTAACTTATAATTGGCATGATATTATCAAGATCT--GTCATTTTGAAAACTGTCATTGTCAATCATTGCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2268029 92 - 8137123 ATATTTTACAAGGTTTAT-------------CAAAAC-----TATAGCTT---ACCAGAACTATTTTCTCAAGATGTAAATCATTTTGAAAGCTATCATTTCGAATAATTGCA i otoGar3.GL873611 C 0 I 469 s canFam3.chr6 61055433 111 - 77573801 --TTTTTAAGTGGTTTCTGTTTCAGTGTGCATATAATACTGTTTTAATATATAATTGGCACTATTTTCTCAAGATCTAAGTCATTTTGAAAACTATTATTGCAAACAATTGCA i canFam3.chr6 C 0 I 1 e aotNan1.NW_018514293v1 119111 46 + 376347 I a score=17118.000000 s hg38.chr7_KI270899v1_alt 162664 2 + 190869 CA s panTro5.chr7_NW_015973580v1_random 38308 2 - 83720 CA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553176 2 + 162613886 CA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124733 2 - 432965 CA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184168 2 + 85365473 CA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34031130 2 + 185818997 CG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33647080 2 + 192294377 CG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414671 2 - 9440265 CA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002812 2 - 21915920 CG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137321 2 - 21531802 CA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171615 2 - 2515279 CG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329532 2 + 6586416 CA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57738 2 + 138751 CA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 373668 2 - 2409723 CA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 535499 2 - 2125214 CA i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61055545 2 - 77573801 CA i canFam3.chr6 I 1 C 0 e otoGar3.GL873611 2268121 469 - 8137123 I e aotNan1.NW_018514293v1 119111 46 + 376347 I a score=225001.000000 s hg38.chr7_KI270899v1_alt 162666 25 + 190869 TATTGCGTTAATTTCCTAAATCACT s panTro5.chr7_NW_015973580v1_random 38310 25 - 83720 TATTGCATTAATTTCCTAAATCACG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553178 25 + 162613886 TATTGCATTAATTTCCTAAATCACG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124735 25 - 432965 TATTGCGTTAATTTCCTAAATCACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184170 25 + 85365473 TATTGCGTTAATTTCCCAAATCATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34031132 25 + 185818997 TATTGCGACAATTTCCTAAGTCACG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33647082 25 + 192294377 TATTGCGACAATTTCCTAAGTCACG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414673 25 - 9440265 TATTGCGACAATTTCCTAAGTCACG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002814 25 - 21915920 TATTGCGACAATTTCCTAAGTCACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137323 25 - 21531802 TATTGTGACAATTTCCTAAGTCACG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171617 25 - 2515279 TATTGCGACAATTTCCTAAGTCACG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329534 25 + 6586416 TATTGCGACGATTTCCTAAGTCACG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57740 25 + 138751 TATTGCAATAATTTCCTAAGTCATA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 373670 25 - 2409723 TATCGTGATAATTTCCTAAGTCATA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 535501 25 - 2125214 TATTGTGATAATTTCCTAAGTCATA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2268590 25 - 8137123 TATTCTAATAATTGCATAAGTCATG i otoGar3.GL873611 I 469 C 0 s canFam3.chr6 61055547 25 - 77573801 CATTCCAATAAACTCGTAAGTCAAA i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 119111 46 + 376347 I a score=2036873.000000 s hg38.chr7_KI270899v1_alt 162691 208 + 190869 ATTCACCAT-CCATCCTTCAAATGCTGAAAACACT-CTCTTGATTCCCAATTTAAATACTTTTACAGGCAATACCACAAATGCCTTTAGAAATGGAAGTTT---GTCTTCTTCTTGTTAT------TTTTGTCTC--TTGTTTCTTCCATCGAATAATGGCCTTGTCGAGTTGGTGAGAGTGA--ATC-ACTTGTGAGTCTTGATTTCCAAAGAGGCTGAGCAG s panTro5.chr7_NW_015973580v1_random 38335 208 - 83720 ATTCACCGT-CCATCCTTCAAATGCTGAAAACACT-CTCTTGATTCCCAATTTAAATACTTTTACAGGCAATACCACAAATGCCTTTAGAAATGGAAGTTT---GTCTTCTTCTTGTTAT------ttttgtctt--ttgtttcttccatcgaataacggccttgtcaggttggtgagagtga--atc-acttgtgggtcttgatttccaaagaggctgagcag i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553203 208 + 162613886 ATTCACCGT-CCATCCTTCAAATGCTGAAAACACT-CTCTTGATTCCCAATTTAAATACTTTTACAGGCAATACCACAAATGCCTTTAGAAATGGAAGTTT---GTCTTCTTCTTGTTAT------TTTTGTCTC--TTGTTTCTTCCATCGAATAACGGCCTTGTCGGGTTGGTGAGAGTGA--ATC-ACTTGTGGGTCTTGATTTCCAAAGAGGCTGAGCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124760 208 - 432965 ATTCACCGT-CCATCCTTCAAATGCTGAAAACACT-CTCTTGATTCCCAATTTAAATACTTTTACAGGCAATACCACAAATGCCTTTAGACATGAAAGTTT---GTCTTCTTCTTGTTAT------TTTTGTCTC--TTGTTTCTTCCATCGAGTAACGGCCTTGTCGGGTTGGTGAGAGTGA--ATC-ACTTGTAGGTCTTGATTTCCAAAGAGGCTGACCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184195 211 + 85365473 ATTCACCGT-CCATCCTTCAAATGCTGAAAACACT-CTCTTGGTTCCCAATTTAAATACTTTTACAGGCAATACCACCAATGCCTTTAGAAATGGAAGTttctcttcttcttcttgttat------ttttgtctc--ttgtttcttcCATCGAATAACGGCCTTGTCGGGTTGGTGAGAGTGA--ATC-ACTTGTGGGTCTTGATTTCCAAAGAGGCTGAGCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34031157 211 + 185818997 ATTCACCGT-CCGTCCTTCAAATGCTGGAGACGCT-CTCTTGTTTCCCAGTTTAAACACGTTGACAGGCAACACCACAAACGTCTTTAGAAATGGAAGTTTGTCTTCTTTTTCTTGTTAT------TTTTGTCAC--TTGTTTCTTCTATCAAATAACAGCCTTGTTGGGTTGGTGAGAGGGA--ACC-ACTTGTGGGTCTTGATTTCCGAAGATGCAGGGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33647107 211 + 192294377 ATTCACCGT-CCGTCCTTCAAATGCTGGAGACGCT-CTCTTGTTTCCCAGTTTAAACACGTTGACAGGCAACACCACAAACGTCTTTAGAAATGGAAGTTTGTCTTCTTTTTCTTGTTAT------TTTTGTCAC--TTGTTTCTTCTATCAAATAACAGCCTTGTTGGGTTGGTGAGAGGGA--ACC-ACTTGTGGGTCTTGATTTCCGAAGATGCAGGGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414698 211 - 9440265 ATTCACCGT-CCGTCCTTCAAATGCTGGAGACGCT-CTCTTGTTTCCCAGTTTAAACACGTTGACAGGCAACACCACAAACGTCTTTAGAAATGGAAGTTTGTCTTCTTTTTCTTGTTAT------TTTTGTCAC--TTGTTTCTTCTATCAAATAACAGCCTTGTTGGGTTGGTGAGAGTGA--ACC-ACTTGTGGGTCTTGATTTCCGAAGATGCAGGGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17002839 211 - 21915920 ATTCACCGT-CTGTCCTTCAAATGCTGGAGACGCT-CTCTTGTTTCCCAGTTTAAACACGTTGACAGGCAACACCACAAACGTCTTTAGAAATGGAAGTTTGTCTTCTTCTTCTTGTTAT------TTTTGTCAC--TTGTTTCTTCTATCAAATAACAGCCTTGTTGGGTTGGTGAGAGTGA--ACC-ACTTGTGGGTCTTGATTTCCGAAGACGCAGGGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137348 209 - 21531802 ATTCACCGT-CCATCCCTCAAATGCTGGAGACG---CTCTTGTTTCCCAGTTTAAATACTTTGACAGGCAACACCACAAACGTCTTTAGAAATGGAAGTTTGTTGTCGTCTCGTTGTTGT------TTTTGTCAC--TTGTTTCTTCCATCGAGTAACAGCCTTGTCAGGTTGGTGAGAGTGA--ACC-ACTTGTGGGTCTTGATTTCCAAAGATGTAGAGCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171642 211 - 2515279 ATTCACCGT-CCGTCCTTCAAATGCTGGAGACGCT-CTCTTGTTTCCCAGTTTAAACACGTTGACAGGCAACACCACAAACGTCTTTAGAAATGGAAGTTTGTCTTCTTCTTCTTGTTAT------TTTTGTCAC--TTGTTTCTTCTATCAAATAACAGCCTTGTTGGGTTGGTGAGAGTGA--ACC-ACTTGTGGGTCTTGATTTCCGAAGATGCAGGGCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329559 211 + 6586416 AGTCACCGT-CCATCCTTCGAATGCTGGAAACGCT-GTCTTGTTTCCCAGTTTAAATACTTTGACAGGCAATACCACAAATGTCTTTAGAAATGGAAGTTTGTCGTCTTCTTCTTGTTAT------TTTTGTCAC--TTGTTTTTTCCATCAAGTAACAGCCTTGTGGGGTTGGTGAGAGTGA--ATC-ACTTGTGGGTCTTGATTTCCAAAGATGCAGAGCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57765 210 + 138751 ATTCTCCAT-CTATCCATCAAATGCTGAAAACA---CTCTTGTTTACCAATTTCAATACTTTTACAGGTAATACCACAAATATCTTTAGAAATGGAAGTTTGTCTTTTTAGTATTGTTAT------TTTTGTCTC-TTTGTTTCTTCAATCAAATAATGGCCTTGTTGGGTTGGGGAGAATGA--GTC-ACTTGTAGGTCTTGATTTCCAAAGAGGCCGAGCAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 373695 203 - 2409723 ATTCTCCAT-CTATCCTTCACATGCTGGAAACA---CTCTTCTTTACCAATTTCAGTACTTTTACAGGTAATGCCGCAAATATCCTTAGAAATGGAAGTTTGTCTCTTTAGCATTGTTAT------TTTTGTCTC-TTTGTTTCTTCAATCGAAGAGTGGCCTTGCT-GGTTGGG------GA--GTC-ACTCGTGGGTCTCGATTTCCAAAGAGGCTGAGCAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 535526 210 - 2125214 ATTCTCCAT-CTGTCCTTCAAATGCTGAAAACA---CTCTTGTTTACCAATTTCAATACTTTTATAGGTAATACCACAAATATCTTTAGAAATGGAAGTTTGTCTCTTTAGTATTGTTAT------TTTTGTCTC-TTTGTTTCTTCAATCGAAGAATGGCCTTGTTGGGTTGGGGAGAGTGA--GTC-ACTTGTGGGTCTTGATTTCCAAAGAGGCTGAGCAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 119157 208 + 376347 ATTCTCCAT-CTATCCTTCAGATGCTGAAAACA---CTCTTGTTTACCGATTTCAATACTTTCACAGGTAATACCACAAATATCTTTAGAAATAGGAGTTTGTCTTTTCAGTATTGTTAT------TTTTGTCTC---TGTTTCTTCAATCAAATAATGGCCTTGCTGGGTTGGGGAGAGTGA--GTC-ACTTGTGGGTCTTGATTTCCAAAGAGCCTGAGCAG i aotNan1.NW_018514293v1 I 46 C 0 s otoGar3.GL873611 2268615 217 - 8137123 ATTCCCCTTCCCATCCCTCACATGTTGATAACATTCCTTTCTGTGTCCTATGTAAATACTTTCATAGGAAATGCCACAGATATTTTCAGGAATGGAAGCATCTTATCTTTGTGTTGAGTT------TTTTGGCTTGTTTGTTTCTTCGGTTGAATAATCTACTTGTTGAACTGGTGAGAATGATTAGC-TTTTATGGGTCTTGATTTTCAAAAAGGCTGAGTGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61055572 211 - 77573801 ATGCACCTT-CCATCCCTTGAACGCTG-AAATA---CTCTTCTTCCCC---TGATATACTTCAACAGATAATGCCACAAATATCTTTAAGAATGGAAGTTGGCCTTTTTGTTGTTGTTATTATGTGTTTATTTGC--TTGTTTCTTCAGATGA-TGATTTTTTTGTGGGGTCAGTTGTGTTGA--ATAGATTTATGGGTCTAGATTTTCAAAAAGGCTGTGCAG i canFam3.chr6 C 0 I 317 a score=658943.000000 s hg38.chr7_KI270899v1_alt 162899 67 + 190869 ATTTACAAGGCCACAAACACCTACTT-CAGATGAGACCTTTGGGG----TCTCTCAGGAGGGGCGAGAGACA s panTro5.chr7_NW_015973580v1_random 38543 66 - 83720 acatacaaggccacaaacacctgctt-cagatgagaccttt-ggg----tctctcaggAGGGGCGAGAGACA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553411 66 + 162613886 ATATACAAGGCCACAAACACCTGCTT-CAGATGAGACCTTT-GGG----TCTCTCAGGAGGGGCGAGAGACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 124968 66 - 432965 ATTTACAAGGCCACAAACACCTGCTT-CAGATGAGACCTTTGGGG----TCTCTCAGGA-GGGCGAGAGACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184406 67 + 85365473 ATTGACAAGGCCACAAACACCTGCTT-CAGGCGAGACCTTTGGGG----TCTCTCAGGAGGGGCGAGAGACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34031368 66 + 185818997 ATTTGCAAGGCCACAAGCACCTGCTT-CAGGTGAGACGTTTGGGG----TCTCTCAGGA-GGGCGAGAGACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33647318 66 + 192294377 ATTTGCAAGGCCACAAGCACCTGCTT-CAGGTGAGACGTTTGGGG----TCTCTCAGGA-GGGCGAGAGACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414909 66 - 9440265 ATTTGCAAGGCCACAAGCACCTGCTT-CAGGTGAGACGTTTGGGG----TCTCTCAGGA-GGGCGAGAGACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17003050 66 - 21915920 ATTTGCAAGGCCACAAGCACCTGCTT-CAGGCGAGATGTTTGGGG----TCTCTCAGGA-GGGCGAGAGACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137557 66 - 21531802 ATGTGCAAGGCCACAAGCACCTGCTT-CAGGCGAGACGTTTGGGG----TCTCTCAGGA-GGGCAAGAGACA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171853 66 - 2515279 ATTTGCAAGGCCACAAGCACCTGCTT-CAGGCGAGACGTTTGGGG----TCTCTCAGGA-GGGCGAGAGACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329770 67 + 6586416 ATTTGCAAGGCCACAAGCACCTGCTT-CAAGCGAGACGTTTGGGG----TCTCTCAGGAGGGGCGAGAGACG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 57975 67 + 138751 ATTTGCAAGGCCACAAACACCTGATT-CAGGTGAGACATTGGGGG----TCTCTCAGGAGGGGTGAGAGACA i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 373898 67 - 2409723 ATTTGCAAGGCTACAAACACCTGATG-CAGGGGAGACATTTGGGG----TCTCTCAGGAGGGGTGAGAGACA i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 535736 67 - 2125214 ATTTGCAAGGCCACAAACACCTGATT-CAGGTGAGACATTTGGGG----TCTCTCAGGAGGGGTGAGAGACA i cebCap1.NW_016107703v1 C 0 I 657 s aotNan1.NW_018514293v1 119365 67 + 376347 ATTTGCAAGGCCACAAACACCTGATT-CAGGTGAGACATTTGGGG----TCTCTCAGGAGGAGTGAGAGACA i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 2268832 72 - 8137123 ATACGCCAGGCCACAAACACCCACTTGCAGTCAAGCCACCTTGGGTTTCTCTCTCAGGCGGGGTTGAGGACA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I a score=88539.000000 s hg38.chr7_KI270899v1_alt 162966 12 + 190869 GAGC-CGGTGACT s panTro5.chr7_NW_015973580v1_random 38609 12 - 83720 GAGC-CGGTGACT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553477 12 + 162613886 GAGC-CGGTGACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125034 12 - 432965 GAGC-CGGTGACT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184473 12 + 85365473 GAGC-CGGTGACT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34031434 12 + 185818997 GAGC-GGGGGACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33647384 12 + 192294377 GAGC-GGGGGACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414975 12 - 9440265 GAGC-GGGGGACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17003116 12 - 21915920 GAGC-GGGGGACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137623 12 - 21531802 GAGC-GGGTGACT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171919 12 - 2515279 GAGC-GGGGGACT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329837 12 + 6586416 GAGC-GGGTGACT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 58043 13 + 138751 GAGCCAGGTGACT i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 373966 13 - 2409723 GAGCTGGGTGACT i saiBol1.JH378296 I 1 C 0 s aotNan1.NW_018514293v1 119433 13 + 376347 GAGCCGGGTGACT i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2268904 13 - 8137123 GAGCCCAAGGACT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I e cebCap1.NW_016107703v1 535803 657 - 2125214 I a score=7397.000000 s hg38.chr7_KI270899v1_alt 162978 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 38621 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553489 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125046 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184485 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34031446 1 + 185818997 C i rheMac8.chr3 C 0 I 6 s macNem1.NW_012019910v1 4414987 1 - 9440265 C i macNem1.NW_012019910v1 C 0 I 6 s chlSab2.chr28 137635 1 - 21531802 C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171931 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 I 5 s colAng1.NW_012117710v1 329849 1 + 6586416 C i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 58056 1 + 138751 C i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 373979 1 - 2409723 C i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 119446 1 + 376347 C i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2268917 1 - 8137123 T i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I e cerAty1.NW_012002954v1 17003128 0 - 21915920 C e macFas5.chr3 33647396 0 + 192294377 C e cebCap1.NW_016107703v1 535803 657 - 2125214 I a score=91368.000000 s hg38.chr7_KI270899v1_alt 162979 31 + 190869 -GCTGGGCGCTGACAGGACCCGCAAGGGTTGG s panTro5.chr7_NW_015973580v1_random 38622 31 - 83720 -GCTGGGCGCTGACAGGACCCGCGAGGGTTGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553490 31 + 162613886 -GCTGGGCGCTGACAGGACCCGCGAGGGTTGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125047 31 - 432965 -ACTGGGCGCTGACAGGACCCACGAGAGTTAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184486 31 + 85365473 -GCTGGGCGCTGACAGGACCCGCGAGGGTTGG i nomLeu3.chr20 C 0 I 22 s chlSab2.chr28 137636 30 - 21531802 -GCTGGGCGCCGA-GGGACCCCCGAGGGTTAG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 329850 31 + 6586416 -GCTGGGCGCCGACGGGACCCCCGAGGGTTAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 58057 31 + 138751 -CCTGGGCCTTGGTAGGACTCTCAGGAGTTAG i calJac3.chrUn_GL286444 C 0 I 2256 s saiBol1.JH378296 373980 31 - 2409723 -ACTGGGCCTTGGCAGGACCCTCAAGAATTAG i saiBol1.JH378296 C 0 I 512 s aotNan1.NW_018514293v1 119447 31 + 376347 -ACTGGGCCTTGGCAGGACCCTCAAGAGTTAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2268918 21 - 8137123 GCCTGGTAGCAGACAGGACCC----------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 171932 5 - 2515279 I e cerAty1.NW_012002954v1 17003128 0 - 21915920 C e macNem1.NW_012019910v1 4414988 6 - 9440265 I e macFas5.chr3 33647396 0 + 192294377 C e rheMac8.chr3 34031447 6 + 185818997 I e cebCap1.NW_016107703v1 535803 657 - 2125214 I a score=11892.000000 s hg38.chr7_KI270899v1_alt 163010 3 + 190869 TTC s panTro5.chr7_NW_015973580v1_random 38653 3 - 83720 TTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553521 3 + 162613886 TTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125078 3 - 432965 TTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184539 3 + 85365473 ttc i nomLeu3.chr20 I 22 C 0 s chlSab2.chr28 137666 3 - 21531802 TTC i chlSab2.chr28 C 0 I 94 s colAng1.NW_012117710v1 329881 3 + 6586416 CTC i colAng1.NW_012117710v1 C 0 I 30 s calJac3.chrUn_GL286444 60344 3 + 138751 ttc i calJac3.chrUn_GL286444 I 2256 C 0 s saiBol1.JH378296 374523 3 - 2409723 TTC i saiBol1.JH378296 I 512 C 0 s aotNan1.NW_018514293v1 119478 3 + 376347 TTC i aotNan1.NW_018514293v1 C 0 I 1131 s otoGar3.GL873611 2268939 2 - 8137123 -TC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 171932 5 - 2515279 I e cerAty1.NW_012002954v1 17003128 0 - 21915920 C e macNem1.NW_012019910v1 4414988 6 - 9440265 I e macFas5.chr3 33647396 0 + 192294377 C e rheMac8.chr3 34031447 6 + 185818997 I e cebCap1.NW_016107703v1 535803 657 - 2125214 I a score=87412.000000 s hg38.chr7_KI270899v1_alt 163013 67 + 190869 GTCAGTATCCA---CCACCCCCTTCCTCTCGC------TGAT-GCTGCTCTGAAtctgacactgtggattggttcgg s panTro5.chr7_NW_015973580v1_random 38656 67 - 83720 GTCAGTATCCA---CCACCCCCTTCCTCTCGC------TGAT-GCTGCTCTGAATCTGACACTGTGGATTGGTTCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553524 67 + 162613886 GTCAGTATCCA---CCACCCCCTTCCTCTCGC------TGAT-Gctgttctgaatctgacactgtggattggttctg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125081 67 - 432965 ATCAGTATCCA---CCACCCCCTTCCTCTCGC------TGAT-GCTGCTCTGAAtctgacactgtggattggttctg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184542 67 + 85365473 gtcagtatcca---ccacccccttcccctcgc------tgac-actgctctgactctaacactgtggattggttctg i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 60347 62 + 138751 atcagtatcca---cctaccccttctgctcag------tgatccctgc------tctaacattgtggattgattctg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 374526 62 - 2409723 GTCGGTATCCA---CCTACCCCTTCTGCTCAG------TGATCGCTGC------CCTAACATTGTGGATTGATTCGG i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2268941 72 - 8137123 CCCTGCGTTCAGGTCCTTCCTTTACTTCTCGCATGCAGTAATGGCTGC-CGGAGCCCCACATCAGAGCTGAGC---- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 329884 30 + 6586416 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 137669 94 - 21531802 I e manLeu1.NW_012101810v1 171932 5 - 2515279 I e cerAty1.NW_012002954v1 17003128 0 - 21915920 C e macNem1.NW_012019910v1 4414988 6 - 9440265 I e macFas5.chr3 33647396 0 + 192294377 C e rheMac8.chr3 34031447 6 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e cebCap1.NW_016107703v1 535803 657 - 2125214 I a score=24130.000000 s hg38.chr7_KI270899v1_alt 163080 6 + 190869 --ctgctg s panTro5.chr7_NW_015973580v1_random 38723 6 - 83720 --CTGCCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553591 6 + 162613886 --ctgccg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125148 6 - 432965 --ctgccg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184609 6 + 85365473 --ctgccg i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33647396 6 + 192294377 --CTGCCG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 17003128 6 - 21915920 --CTGCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137763 6 - 21531802 --CTGCCA i chlSab2.chr28 I 94 C 0 s colAng1.NW_012117710v1 329914 6 + 6586416 --CTGCCG i colAng1.NW_012117710v1 I 30 C 0 s calJac3.chrUn_GL286444 60409 6 + 138751 --ctgctg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 374588 6 - 2409723 --CTGCTG i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2269013 6 - 8137123 CTGTGC-- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 171932 5 - 2515279 I e macNem1.NW_012019910v1 4414988 6 - 9440265 I e rheMac8.chr3 34031447 6 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e cebCap1.NW_016107703v1 535803 657 - 2125214 I a score=2367.000000 s hg38.chr7_KI270899v1_alt 163086 1 + 190869 t s panTro5.chr7_NW_015973580v1_random 38729 1 - 83720 T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553597 1 + 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125154 1 - 432965 t i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184615 1 + 85365473 t i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33647402 1 + 192294377 A i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 17003134 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137769 1 - 21531802 T i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171937 1 - 2515279 T i manLeu1.NW_012101810v1 I 5 C 0 s colAng1.NW_012117710v1 329920 1 + 6586416 T i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 60415 1 + 138751 t i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 374594 1 - 2409723 G i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2269019 1 - 8137123 T i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I e macNem1.NW_012019910v1 4414988 6 - 9440265 I e rheMac8.chr3 34031447 6 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e cebCap1.NW_016107703v1 535803 657 - 2125214 I a score=247811.000000 s hg38.chr7_KI270899v1_alt 163087 41 + 190869 aggattttctacaaacggaacatggacaggtcctct--ttggg s panTro5.chr7_NW_015973580v1_random 38730 41 - 83720 AGGATTTTCTACAAACGGAACACGGACAGGTCCTCT--CTGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553598 41 + 162613886 aggattttctacaaacggaacacggacaggtcctct--ttggg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125155 41 - 432965 aggattttctacaaacggaacatggacaggtcctgt--ttggg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184616 41 + 85365473 agggttttccataaacggaacgtggacgggtcctgt--ttggc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34031453 43 + 185818997 AGGATTTTCCATAAACGGAACGTGGACAGGTCCTGTAGGTGGG i rheMac8.chr3 I 6 C 0 s macFas5.chr3 33647403 43 + 192294377 AGGATTTTCCATAAACGGAACGTGGACAGGTCCTGTAGGTGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4414994 43 - 9440265 AGGATTTTCCATAAACGGAACGTGGACAGGTCCTGTAGGTGGG i macNem1.NW_012019910v1 I 6 C 0 s cerAty1.NW_012002954v1 17003135 43 - 21915920 AGGATTTTCCATAAACGGAACGTGGACAGGTCCTGTAGGTGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 137770 43 - 21531802 AGGATTGTCTATAAACGGAACGTGGACAGGTCCTGTAGGTGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 171938 43 - 2515279 AGGATTTTCCATAAACGGAACGTGGACAGGTCCTGTAGGTGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 329921 43 + 6586416 AGGATTTTCTATAAACGGAACGTGGACAGGTCCTGTAGGTGGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 60416 36 + 138751 aggattttctataaatg-----tgaacccaccctgt--ttgtc i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 374595 36 - 2409723 AGGATTTTCTATAAATG-----TGACCCCACCCTGT--TTGTC i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2269020 41 - 8137123 AAGGTTTCCTATCAGTGGAATGTGCAGCTGTCCTGT--CTGTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e cebCap1.NW_016107703v1 535803 657 - 2125214 I a score=4441594.000000 s hg38.chr7_KI270899v1_alt 163128 586 + 190869 tccgccctttggtctcagcatcatggctgagacaagtcctgtcgtagctatgtcag--agtggcgggg-tcc-tcacttctcactcctgt-ccagattctcctgtgt--gtaccccacaggctgtgcacccgctctgccatcagtggg------catctgggGCGCATGGCAGACCATGTGCATGTCGG-CCATGTGAGCCCATGTCCTGGTGTCCACCCCATGCAGCCTGTCCCG-GGGGTGGCCT----------------------GAGGCTGCCTTGCCTCCCCTGGGCTGAGGCTGGGACACCTGTGGCCTGTCTTACCCTTTTGCTGGCGTCCTCTGGG---------------GAGTATCCAGAAGTGAGGGGCCCCACGGAGAGGCGCATGCAGCAGGAACCCCAGGCAGTGC-CGGCAGCCCCAGGAGAGAATCC--CACCAGCCGCCATGCGAGTGAGCTTGGAGACCA----CGCAGTCGGGAGAGGCCG-----------CCCGG--CC---------ACAGAAAAAAGTCGTCCTGTTGTTCAGGAT-CCAGGCCAGGGTCATCTGCTGAGCAGCAACAGACAAGGAAAACC-GCCGTTACGGGCACTGCTGCCATCTCGCAATTTACATAAA-GTCTCAGCTCTGTGC---GTGGGACA s panTro5.chr7_NW_015973580v1_random 38771 595 - 83720 TCCGCCCTTTGGTCTCAGCATCATGGCTGAGACGAGTCCCGTCGTAGCTATGTGAG--AATGGCGGGG-TCC-TCACTTCTCACTGCTGT-TCAGATTCTCCTGCGT--GTACCCCACAGGCTGTGCACCCGTTCTGCCATCAGTGGG------CATCTGGGGCGCATGGCAGACCACGTGCATGTCAG-CCATGTGAGCCCATGTCCTGGTGTTCACCCCATGCAGCCTGTCCCG-GGGGTGGCCT----------------------GAGGCTGCCTTGCCTCCCCTGGGCTGAGGCTGGGACACCTGTGGCCTGTCTTACCCTTTTGCTGGTGTCCTCTGGG---------------GAGTATCCAGAAGTGAGGGGCCCCACGGAGAGGCGCATGCAGCAGGAACCCCAGGCAGTGC-CGGCAGCCCCAGGAGAGAATCC--CACCAGCCACCATGCGAGTGAGCTCGGAGACCA----CGCAGTCGGGAGAGGCCG-----------CCCGG--CCACAGAAAATACAGAAAAAAGTCGTCCTGTTGTTCAGGAT-CCAGGCCAGGGTCATCTGCTGAGCAGCAACAGACAAGGAAAACC-GCCGTTACGGGCACTGCTGCCATCTCGCAATTTACATAAA-GTCTCAGCTCTGTGC---GTGGGACA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 553639 595 + 162613886 tccgccctttggtctcagcatcatggctgagacgagtcccgtcgtagctatgtcag--agtggcaggg-tcc-tcacttctcactgctgt-ccagattctcctgcgt--gtaccccacaggctgtgcacccgctctgccaccagtggg------catctgggGCGCATGGCAGACCACGTGCATGTCGG-CCATGTGAGCCCATGTCCTGGTGTCCACCAAATGCAGCCCGTCCCG-GGGGTGGCCA----------------------GAGGCTGCCTTGCCTCCCCTGGGCTGAGGCCGGGACACCTGTGGCCTGTCTTACCCTTTTGCTGGCGTCCTCTGGG---------------GAGTATCCAGAAGTGAGGGGCCCCACGGAGAGGCGCATGCAGCAGGAACCCCAGGCAGTGC-TGGCAGCCCCAGGAGAGAATCC--CACCAGCCACCATGCGAGTGAGCTCGGAGACCA----CGCAGTCGGGAGAGGCCG-----------CCTGG--CCACAGAAAATACAGAAAAAAGTCATCCTGTTGTTCAGGAT-CCAGGCCAGGGTCATCTGCTGAGCAGCAACAGACAAGGAAAACC-GCCATTACGGGCACCGCTGCCATCTCGCAATTTACATAAA-GTCTCAGCTCTGTGC---GTGGGACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125196 596 - 432965 tccgccctttggtctcagcatcatggctgagacgaatcccatcatagctacgtcag--agtggcgggg-tcc-tcacttctcactgctgt-ccagattctcctgcgt--gtaccccacaggctgtgcacccactctgccatcagtggg------catctgggGCGCATGGTAGACCACGTGCATGTCGG-CCATGTGATCCCATGTCCTGGTGTCCGCCCCATGCAGCCCGTCCTG-AGGGTGGCCT----------------------GAGGCTGCCTTGCCTCCCCTGGGCTGAGGCTGGGACACCTGTGGCCTGTCTTACCCTCTTGCTGGCATCCTCTGGG---------------GAGTATCCAGAAGTGAGGGGCCCCACGGAGAGGCGCATGCAGCAGGAACCCCGGGCAGTGCATGGCAGCCCCAGGAGAGAATCC--CACCAGCTGCCACGCAAGTGAGCTCGGAGACCA----CACAGTCGGGAGAGGCCA-----------CCCGG--CCACAGAAAATACAGAAAAAAGTCGTCCTGTTGTTCAGGAT-CCAGGCCAGGGTCATCTGCTGAGCAGCAACAGACAAGGAAAACC-GCCGTTACGGGCACAGCTGCCATCTCGTAATTTACATAAA-GTCTCAGCTCTGTGC---ATGGGACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 184657 597 + 85365473 tgcgccctttggtctcagcattgtggccgagatgagtccagtcgtagctaggtcag--agtggcaggg-tcc-tcacttctcactgctgt-ccagattctcccgtgc--gtaccccacaggctgtgcacccgctctgccatcagtggg------catctgggGCGTATGGTAGACCACGTGCATGTCGG-CCATGTGAGCCCATGTCCTGGTGTCCGCCCCGTGCCCCCCGTCCCG-GGGGTGGCCT----------------------GAGGATGCCTTGCATCCCCTGGGCTGAGGCTGGGACACCTGTGGcctgtctcaccctcttgctggcgtcttctggg---------------gagtatccataagtgaggggccccacggagaggcgcacgtggcaggaaccccgggcagtgcctggcagccccaggagagaatcc--caccagcagccacgcgagtgagcttggaGACCA----CGCAGCCGGGAGAGGCCG-----------CCTGG--CCACAGAAAATACAGAAACAAGTCGCCCTGTTGTTCAGGACACCAGGCCAGGGAAATCCGCTGAGCAGCAACAGACAAGGAATACC-GCCGTTACGGGCACCTCTGCCATCTTGCAATTTACATAAA-GTCTCAGCTCTGTGC---GTGGGACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34031496 562 + 185818997 TCCTCCCTTTGGTCTCAGCATCATGGCTGAGACGAGTCCAGTCATAGCTACGTCAG--AGTGGCAGGG-TCC-TTGCTTCTCACTGCTGT-CCAGGTTCTCCTGTGC--GTACCCCACAGGCTGTGCACCTACCGTGCCATCAGTGGG------CATCTGGGGCGCATGGTAGACCACGTGCAGGTCAGCCCGCGTGAGCCCGTGTCCTGGTGTCTGCCCCGTGCAGTCCGTCCCT-GGGGTGGCCT----------------------GAGGCTGCCTTGCCTCCCTTGGGCTGAGGCTGGAACAACTGCGGCCTCTCTTACCTTCCTGCTGGCGTCCTCTGGG---------------GAGTATCCAGAAGTGAGGG-----ATGGTGA-------------------------------TGGCAGCCCCAGGAGATAATCC--CACCAGCAGCCACGTGAGTGAGCTTGGAGACCA----CGCAGCCGAGAGAGGCCA-----------CCCGG---CACAGAAAATACGGAGACAAGTCGTCCTGTTGTTCAGGACGCCAGGCCAGGGTCGTCTGCTGAGCAGCAACAGACAAGGAACGCCGGCTGCTACTGGCACCTCTGCCGTCCTGCAATTTACATCAA-GTCTGAGCTCTGTGC---GTGTGACA i rheMac8.chr3 C 0 I 105 s macFas5.chr3 33647446 562 + 192294377 TCCTCCCTTTGGTCTCAGCATCATGGCTGAGACGAGTCCAGTCATAGCTACGTCAG--AGTGGCAGGG-TCC-TTGCTTCTCACTGCTGT-CCAGGTTCTCCTGTGC--GTACCCCACAGGCTGTGCACCCACCGTGCCATCAGTGGG------CATCTGGGGCGCATGGTAGACCACGTGCAGGTCAGCCCGCGTGAGCCCGTGTCCTGGTGTCCGCCCCGTGCAGTCCGTCCCT-GGGGTGGCCT----------------------GAGGCTGCCTTGCCTCCCTTGGGCTGAGGCTGGAACAACTGCGGCCTCTCTTACCTTCCTGCTGGCGTCCTCTGGG---------------GAGTATCCAGAAGTGAGGG-----ATGGCGA-------------------------------TGGCAGCCCCAGGAGATAATCC--CACCAGCAGCCACGTGAGTGAGCTTGGAGACCA----CGCAGCCGAGAGAGGCCA-----------CCCGG---CACAGAAAATACGGAGACAAGTCGTCCTGTTGTTCAGGACGCCAGGCCAGGGTCGTCTGCTGAGCAGCAACAGACGAGGAACGCCGGCTGCTACTGGCACCTCTGCCGTCCTGCAATTTACATCAA-GTCTGAGCTCTGTGC---GTGTGACA i macFas5.chr3 C 0 I 2 s macNem1.NW_012019910v1 4415037 562 - 9440265 TCCTCCCTTTGGTCTCAGCATCATGGCTGAGATGAGTCCAGTCATAGCTACGTCAG--AGTGGCAGGG-TCC-TTGCTTCTCACTGCTGT-CCAGGTTCTCCTGTGC--GTACCCCACAGGCTGTGCACCCGCCGTGCCATCAGTGGG------CATCTGGGGCGCATGGTAGACCACGTGCAGGTCAGCCCGCGTGAGCCCGTGTCCTGGTGTCCGCCCCGTGCAGTCCGTCCCT-GGGGTGGCCT----------------------GAGGCTGCCTTGCCTCCCTTGGGCTGAGGCTGGAACAACTGCGGCCTCTCTTACCTTCCTGCTGGCGTCCTCTGGG---------------GAGTATCCAGAAGTGAGGG-----ATGGCGA-------------------------------TGGCAGCCCCAGGAGATAATCC--CACCAGCAGCCACATGAGTGAGCTTGGAGACCA----CGCAGCCGAGAGAGGCCG-----------CCCGG---CACAAAAAATACGGAGACAAGTCGTCCTGTTGTTCAGGACGCCAGGCCAGGGTCGTCTGCTGAGCAGCAACAGACGAGGAATGCTGGCTGCTACTGGCACCTCTGCCGTCCTGCAATTTACATCAA-GTCTGAGCTCTGTGC---GTGTGACA i macNem1.NW_012019910v1 C 0 I 105 s cerAty1.NW_012002954v1 17003178 562 - 21915920 TCCTCCCTTTGGTCTCAGCATCATGGCTGAGACAAGTCCAGTCATAGCTACGTCGG--AGTGGCAGGG-TCC-TTGCTTCTCACTGCTGT-CCAGGTTCTCCTGTGC--GTACCCCACAGGCTGTGCACCCGCCGTGCCGTCGGTGGG------CATCTGGGGCACATGGTAGACCACGTGCAGGTCAGCCCGCGTGAGCCCATGTCCTGGTGTCCGCCCCGTGCAGTCCATCCCT-GGGGTGGCCT----------------------GAGGCTGCCTTGCCTCCCTTGGGCTGAGGCTGGAACAACTGCGGCCTCTCTTACCTTCCTGCTGGCGCCCTCTGGG---------------GAGTATCCAGAAGTGAGGG-----ATGGCGA-------------------------------TGGCAGCCCAAGGAGATAATCC--CACCAGCAGCCACGTGAGTGAGCTTGGAGACCA----CGCAGCCGAGAGAGGCCG-----------CCCGG---CACAGAAAATACGGAGACAAGTCGTCCTGTTGTTCAGGACGCCAGGCCAGGGTCGTCTGCTGAGCAGCAACAGACGAGGAACGCCGGCTGCTACTGGCACCTCTGCCGTCCTGCAATTTACATCAA-GTCTGAGCTCTGTGC---GTGTGACA i cerAty1.NW_012002954v1 C 0 I 2 s chlSab2.chr28 137813 562 - 21531802 TCCTCCCTTTGGTCTCAGCATCATGGCTGAGACGAGTCCAGTCATAGCTATGTCAG--AGTGGCGGGG-TCC-TCACTTCTCACTGCTGT-CCAGGTTCTCCTGTGC--GCACCCCACAGGCTGTGCACCGGCCGTGCCATCGGTGGG------CATCTGGGGCACATGATAAACCACGTGCAGGTCAGCCCGTGTGAGCCCAAGTCCTGGTGTCCGCCCCCTGCAGCCCGTCCCT-GGGGTGGCCT----------------------GAGGCTCCCTTGCCTCCCCAGGGCTGAGGCTGGAACAACTGTGGCCTCTCTTACCCTCCTGCTGGCGTCCTCTGTG---------------GAGTGTCCAGAAGTGAGGG-----ATGGCGA-------------------------------TGGCAGCCCCAGGAGATAATCC--CACCAGCAGCCACGTGAGTGAGCTTGGAGACCA----CACAGCCGGGAGAGGCCG-----------CCCGG---CACAGAAAATATGGAGACAAATCGTCCTGTTGTTCAGGACACCAGGCCAGGGTCGTCTGCTGAGCAGCAACAGACAGGGAATGCCGGCTGCTCTTGGCACCTCTGCCGTCCTGCAATTTACATCAA-GTCTGAGCTCTGTGC---GTGCAACA i chlSab2.chr28 C 0 I 2 s manLeu1.NW_012101810v1 171981 562 - 2515279 TCCTCCCTTTGGTCTCAGCATCATGGCTGAGACGAGTCCAGTCATAGCTACGTCAG--AGTGGCAGGG-TCC-TTGCTTCTCACTGCTGT-CCAGGTTCTCCTGTGC--GTACCCCACAGGCTGTGCACCCGCCGCGCCATCGGTGGG------CATCTGGGGCGCATGGTAGACCACGTGCAGGTTAGCCCGCGTGAGCCCATGTCCTGGTGTCCGCCCCGTGCAGTCCGTCCCT-GGGGTGGCCT----------------------GAGGCTGCCTTGCCTCCCTTGGGCTGAGGCTGGAACAACTGCGGCCTCTTTTACCTTCCTGCTGGCGTCCTCTGGG---------------GAGTATCCAGAAGTGAGGG-----ATGGCGA-------------------------------TGGCAGCCCCAGGAGATAATCC--CACCAGCAGCCACGTGAGTGAGCTTGGAGACCA----CGCAGCCGAGAGAGGCCG-----------CCCGG---CACAGAAAATACGGAGACAAGTCGTCCTGTTGTTCAGGACGCCAGGCCAGGGTCGTCTGCTGAGCAGCAACAGACGAGGAACGCCGGCTGCTACTGGCACCTCTGCCGTCCTGCAATTTACATCAA-GTCTGAGCTCTGTGC---GTGTGACA i manLeu1.NW_012101810v1 C 0 I 2 s colAng1.NW_012117710v1 329964 592 + 6586416 TCCTCCCTTTGGTCTCAGCATCACGGCTGAGACGAGTCCAGTCATAGCTACGTCAG--AGTGGCGGGG-TCC-TCACTTCTCACTGCTGT-CCAGGTTCTCCTGTGC--GTACCCCACAGGCTGTGCACCCGCCCTGCCGTCAGTGGG------CATCTGGGGCACATGATAGACCACGTGCAGGTCAGCCCGCGTGAGCTCATGTCCTGGTGTCTGCCCCGTGCAgcctgtccct-ggggtggcct----------------------gaggctgccttgcctcccctgggctgaggctggAACAACTGTGGCCTCTCTTACCCTCCTGCTGGCGTCCTCTGGG---------------GAGTATCCAGAAGAGAGGG-----ATGGAGAGGCGCACGCAGCAGGAACCCC-GGCAGTGCCCGGCAGCCCCAGGAGATAATCC--CACCAGCAGCCACGTGAGTGAGCTTAGAGACCA----CGCAGCCAGGAGGGGCCG-----------CCCGG---CACAGAAAACACAGAGACAAGTCGTCCTGTTGTTCGGGACGCCAGGCCAGGGTCGTCTGCTGAGCAGCAACAGACGAGGAGTGCCGGCTGCTACTGGCACCTCTGCCGTCTTGCAATTTACATCAA-GTCTGAGCTCTGTGC---GTGCGACA i colAng1.NW_012117710v1 C 0 I 112 s calJac3.chrUn_GL286444 60452 580 + 138751 tccacccttagatctcagcatcatggctgagatgagtccagttgtagctatgtcag--aggggcagggatct-ttacttctcactgctgt-tcacattctcctgtgc--ataccccacatgctgctcacccactcagccatctgtggg------catctgggGTACATAGTAGACCACAGGCATGTTGGCCCCCATGAGCCCATCCTCTGGTGTGCATTCTGTGAAGCCTGTCCCT-GGGGTGGCCT---------------------GGAGGCTGCCTTGCCTCCCCTGGGCTGAGGCTGGGACAACTGTGCCCTCTCTTGCCATCTTGCTGGTGTCCTCTGGG---------------GAGTGCCCAGAAGTGAGTGATCTCATGGAGAGGTGCACAGGGCA--------------------GCAGCCCCAGGAGAGAATCTCACACCTGCAGCCACGTGAGTGAACTTGGAG-CCA----TGTGGCCAGGAGAGGCTG-----------CCCAG--CCACAGAAAATAGGGAAACAAGG---GCTGTTGTTCAGGATGCCAGGTCAGGGTCCTCTGCTGAGCAGCAAT-GAC-AGGAATACCAGCAGGTACTGCCACCTCTGCCATTTTGCAATTTATATGAA-GTCTCAGCTCTGTGTATGATGGGACA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 374631 596 - 2409723 TCCACCCTTTGGTCTCAGGGTCATGGCTGAGACGAGTCTAGTTGTAGCTATGTCAG--AGGGGCAGGGATCT-TCGCTTGTCACTGCTGT-TCAGATTCTCCTGTGT--ATACCCCACACGCTGCACACCCACTCAGCCATCTGTGGG------CATCTGGGGCACACAGTAGACTACAGGCATGTTGGCCCCCATGAGCCCATCTTCTGGTGTGCGTTCCGTGAAGCCTGTCCCT-GGGGTGGCCT---------------------GGAGGCTGCCTTGCCTCCCCTGGGCTGAAGCTGGGACAGCTgtgccctctcttgccctctttctggtgtcctctggg---------------gagtgcccagaagtgagtgatctcatggagaggtgtacatggcaggaatcctgggcagtgcccggcagcgccaggagagaatcc--cacctgcagccacgtgagtgagcttggaGACCA----TGTGGCCGGGAGAGGCCA-----------CCCAG--CCACAGAAAATAGGGAAACAAGG---GGTGTTGTTCAGGATGCCAGGTCAGGGTCCTCTGCTGAGCAGCAAT-GAC-GGGAATACCGGCAGGGACTGCCACCTCTACCATTTTGCAATTTACATGAA-GTCTCAGCTCTGTGC---ATGGGACA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 536460 595 - 2125214 TCCACCCTTTGGTCTCAGCATCATGGCTGAGACGAGTCCAGTTGTAGCTATGTCAG--AGGGGCAGGGATCT-TCACTTGTCACTGCT-T-TCAGATTCTCCTGTGC--ATACCCCACACGCTGCGCACCCACTCAGCCATCTGTGGG------CATCTGGGACACATAGTAGACCACAGGCATGTTGGCCCCCATAAGCCCATCTTCTGGTGTGCGTTCCGTGAAGCCTGTCCCT-GGGGTGGCCT---------------------GGAGGCTGCCTTGCCTCCTGTGGGCTGAGGCTGGGACAACTgtgccctctcttgccctcttgctggtgtcctctggg---------------gagtgcccagaagtcagtgacctcgtggagaggcgcacatggcaggaatcctgggcagtgcccagcagccccaggagagaatcc--cacctgcagccacgtgagtgagcttggaGACCA----TGTGGCCGGGCGAGGCTG-----------CCCAG--CCACAGAAAATAGGGAAACAAGG---GCTGTTGTTCAGGATGCCAGGTCAGGGTCCTATGTTGAGCAGCAAT-GAC-AGGAATATCGGCAGGTACTGCCACCTCTGCCATTTTGCAATTTACATGAT-GTCTCAGCTCTGTGC---ATGGGACA i cebCap1.NW_016107703v1 I 657 C 0 s otoGar3.GL873611 2269061 554 - 8137123 --------------TCAGCAATGTGGC---------------CATAGTGGGgttgggtagggcaaaag-tctgtcacttttcactgctgtgtgggattctctagggcaagtatgccacatcttgcctaccagttatactgtcagtgggcatggacatttgggGCCTGCAGGGGACAGCGTATAGGCTGGCCCAGGGAGAC---TGTCCTGGTGTCT-CACTTTGCAGGGCGCCTCTCAGTGTAACCTAAAGTGTGGAAGTGTCAAGATGGAGGCTGGCT--CCTTCTCT--GCTAGGGTCGTGAAGTGTGTGG-ctctcctgcccttttgctggctccctcagggacactgatctgttgtgagctgctcagtatgagggcccacatgg----------------------------------caagagctc--------agtgc--agcctgcag-cAGGTGAGTGAGCTTGGA--CCATGATTGCAACTAGGAGAGGCTGAGCCACCTGCCCCCTGACCCATGGAAAACA--------------ACTGCCGTTCAGGATGCCAG----------------GGGCTGGCATGGAGAAGTAACATAGGCTGGAATCAGCTTCTCGACAATTTCACAATGTGCATAAAGGGCTTATCTCTGTGT---GTGGGACA i otoGar3.GL873611 C 0 I 1 e canFam3.chr6 61055783 317 - 77573801 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=396480.000000 s hg38.chr7_KI270899v1_alt 163714 79 + 190869 GCAGCGTTTGAAGCTGTCCCCATCA-AGGGCCTGTACAACCACCTCC-TTCACAGTTAGGGG-TTGGCCGTCCTGAggctgc s panTro5.chr7_NW_015973580v1_random 39366 79 - 83720 GCAGCGTCTGAAGCTGTCCCCATCA-AGGGCCTACACAACCACCTCC-TTCACAGTTAGGGG-TTGGCCGTCCTGAGGCTGc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554234 79 + 162613886 GCAGCGTCTGAAGCTGTCCCCATCA-AGGGCCTACACAACCACCTCC-TTCACAGTTAGGGG-TTGGCCGTCCTGAggctgc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125792 79 - 432965 GCAGCATCTGAAGCTGTCCCCATCA-AGGGCCTGCACAACCACCTCC-TTCATAGTTAGGGG-TTGGCCGTCCTGAGGCTcc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185254 79 + 85365473 GCAGCGTCTAAAGCTGTCCCCATCA-AGGGCCTACACAACCACCTCC-TTCACAGTTAGGGG-TTGGCCATCCTGAGGCTGC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33648010 79 + 192294377 GCGGCATCTAAAGCTGTCCCCAGCA-AGGGCCCATGTAACCACCTCC-TTCCCAGTCAGGCA-TTGGCTGTCCGGAGGCTGC i macFas5.chr3 I 2 C 0 s cerAty1.NW_012002954v1 17003742 79 - 21915920 GCAGCATCTAAAGCTGACCCCAGCA-AGGGCCCATGTAACCACCTCC-TTCCCAGTCAGGCA-TTGGCTGTCCGGAGGCTGC i cerAty1.NW_012002954v1 I 2 C 0 s chlSab2.chr28 138377 79 - 21531802 GCAGCGTCTAAAGGTGTCCCCAGCA-AGGGCCCATGTAACCACCTCC-TTCCCAGTCAGGCG-CTGGCTGTCCTGAGGCTGC i chlSab2.chr28 I 2 C 0 s manLeu1.NW_012101810v1 172545 79 - 2515279 GCAGCATCTAAAGCTGTCCCCAGCA-AGGGCCCATGTAACCACCTCC-TTCCCAGTCAGGCA-TTGGCTGTCCGGAGGCTGC i manLeu1.NW_012101810v1 I 2 C 0 s calJac3.chrUn_GL286444 61032 79 + 138751 GCAGCATCCAAAGCTGTTCCCATCA-GGGGCTTACACAGCCACCTCC-TTCACAATTAGGAG-TTGGCTGTCCTAAGCCTGC i calJac3.chrUn_GL286444 C 0 I 40 s saiBol1.JH378296 375227 80 - 2409723 GCAGTGTCCAAAGCTGCCCCCATTA-GGGGCTTACACAGCCACCTCCTTTCCCGATTAGGAG-TTGGCTGTCCTAAGCCTGC i saiBol1.JH378296 C 0 I 40 s cebCap1.NW_016107703v1 537055 79 - 2125214 GCAGCATCCAAAGCTGTCCCCATCA-GGGGCTTACACAGCCACCTCC-TTCCCAATTAGGAG-TTGGCTGTCCTAAGCCTGC i cebCap1.NW_016107703v1 C 0 I 1 s otoGar3.GL873611 2269616 77 - 8137123 GCAGCTCTTACA----TGCCCACTGTGGGGCCTGAGCACACGATTTC-TTCCCAACAAGAGGCCTGACTGCCCTGGGGCTGC i otoGar3.GL873611 I 1 C 0 e colAng1.NW_012117710v1 330556 112 + 6586416 I e canFam3.chr6 61055783 317 - 77573801 I e macNem1.NW_012019910v1 4415599 105 - 9440265 I e rheMac8.chr3 34032058 105 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=-3440.000000 s hg38.chr7_KI270899v1_alt 163793 2 + 190869 -cc s panTro5.chr7_NW_015973580v1_random 39445 2 - 83720 -cc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554313 2 + 162613886 -cc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125871 2 - 432965 -cc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185333 2 + 85365473 -CC i nomLeu3.chr20 C 0 I 39 s macFas5.chr3 33648089 2 + 192294377 -CG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 17003821 2 - 21915920 -CG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 138456 2 - 21531802 -CG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 172624 2 - 2515279 -CG i manLeu1.NW_012101810v1 C 0 C 0 s cebCap1.NW_016107703v1 537135 1 - 2125214 -C- i cebCap1.NW_016107703v1 I 1 I 50 s otoGar3.GL873611 2269693 2 - 8137123 AC- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 330556 112 + 6586416 I e canFam3.chr6 61055783 317 - 77573801 I e macNem1.NW_012019910v1 4415599 105 - 9440265 I e rheMac8.chr3 34032058 105 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 375307 40 - 2409723 I e calJac3.chrUn_GL286444 61111 40 + 138751 I a score=16114.000000 s hg38.chr7_KI270899v1_alt 163795 20 + 190869 gaccccc-tcccggctccccg s panTro5.chr7_NW_015973580v1_random 39447 20 - 83720 gaccccc-tcccggctccccg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554315 20 + 162613886 gaccccc-tcccggctccccg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125873 19 - 432965 gaccccc-tcccggct-cccg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185374 21 + 85365473 GAcccccttcccggctccccg i nomLeu3.chr20 I 39 I 1 s macFas5.chr3 33648091 20 + 192294377 GAAGCCG-AAGTGGAGCCGCG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 17003823 20 - 21915920 GAAGCCG-AAGTGGAGCCGCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 138458 20 - 21531802 GAAGCCG-AAGTGGAGCCGCG i chlSab2.chr28 C 0 I 5 s manLeu1.NW_012101810v1 172626 20 - 2515279 GAAGCCG-AAGTGGAGCCGCG i manLeu1.NW_012101810v1 C 0 C 0 s otoGar3.GL873611 2269695 12 - 8137123 ---------TTTAGCCCCACA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 330556 112 + 6586416 I e canFam3.chr6 61055783 317 - 77573801 I e macNem1.NW_012019910v1 4415599 105 - 9440265 I e rheMac8.chr3 34032058 105 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 375307 40 - 2409723 I e cebCap1.NW_016107703v1 537136 50 - 2125214 I e calJac3.chrUn_GL286444 61111 40 + 138751 I a score=-12205.000000 s hg38.chr7_KI270899v1_alt 163815 30 + 190869 accccctcccggctccccgaccccctcccg s panTro5.chr7_NW_015973580v1_random 39467 20 - 83720 accccctcccggctccccga---------- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554335 20 + 162613886 accccctcccggctccccga---------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125892 2 - 432965 ac---------------------------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185396 21 + 85365473 accccctgcctgctccccgac--------- i nomLeu3.chr20 I 1 C 0 s macFas5.chr3 33648111 2 + 192294377 -------------TC--------------- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 17003843 2 - 21915920 -------------TC--------------- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 172646 2 - 2515279 -------------TC--------------- i manLeu1.NW_012101810v1 C 0 C 0 s otoGar3.GL873611 2269707 3 - 8137123 ACA--------------------------- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 330556 112 + 6586416 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 138478 5 - 21531802 I e macNem1.NW_012019910v1 4415599 105 - 9440265 I e rheMac8.chr3 34032058 105 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 375307 40 - 2409723 I e cebCap1.NW_016107703v1 537136 50 - 2125214 I e calJac3.chrUn_GL286444 61111 40 + 138751 I a score=2135.000000 s hg38.chr7_KI270899v1_alt 163845 3 + 190869 gct s rheMac8.chr3 34032163 3 + 185818997 GAA i rheMac8.chr3 I 105 C 0 s macFas5.chr3 33648113 3 + 192294377 GAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4415704 3 - 9440265 GAA i macNem1.NW_012019910v1 I 105 C 0 s cerAty1.NW_012002954v1 17003845 3 - 21915920 GAA i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 172648 3 - 2515279 GAA i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 330556 112 + 6586416 I e otoGar3.GL873611 2269710 0 - 8137123 C e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 138478 5 - 21531802 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 375307 40 - 2409723 I e cebCap1.NW_016107703v1 537136 50 - 2125214 I e calJac3.chrUn_GL286444 61111 40 + 138751 I e nomLeu3.chr20 185417 0 + 85365473 C e panPan2.chr7 554355 0 + 162613886 C e panTro5.chr7_NW_015973580v1_random 39487 0 - 83720 C e gorGor5.CYUI01015914v1 125894 0 - 432965 C a score=7034.000000 s hg38.chr7_KI270899v1_alt 163848 4 + 190869 cccc s rheMac8.chr3 34032166 3 + 185818997 -TCC i rheMac8.chr3 C 0 I 1 s macFas5.chr3 33648116 3 + 192294377 -TCC i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4415707 3 - 9440265 -TCC i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 17003848 3 - 21915920 -TCC i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 138483 3 - 21531802 -TCC i chlSab2.chr28 I 5 I 1 s manLeu1.NW_012101810v1 172651 3 - 2515279 -TCC i manLeu1.NW_012101810v1 C 0 I 1 s otoGar3.GL873611 2269710 4 - 8137123 CTCC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 330556 112 + 6586416 I e canFam3.chr6 61055783 317 - 77573801 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 375307 40 - 2409723 I e cebCap1.NW_016107703v1 537136 50 - 2125214 I e calJac3.chrUn_GL286444 61111 40 + 138751 I e nomLeu3.chr20 185417 0 + 85365473 C e panPan2.chr7 554355 0 + 162613886 C e panTro5.chr7_NW_015973580v1_random 39487 0 - 83720 C e gorGor5.CYUI01015914v1 125894 0 - 432965 C a score=54586.000000 s hg38.chr7_KI270899v1_alt 163852 13 + 190869 gacccccctcccg s panTro5.chr7_NW_015973580v1_random 39487 10 - 83720 ---cccccTCCCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554355 10 + 162613886 ---ccccctcccg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125894 10 - 432965 ---ccccctcccg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185417 10 + 85365473 ---ccccttcccg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34032170 13 + 185818997 GACCCCTCTCCCA i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33648120 13 + 192294377 GACCCCTCTCCCA i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4415711 13 - 9440265 GACCCCTCTCCCA i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 17003852 13 - 21915920 GACCCCTCTCCCA i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 138487 13 - 21531802 GACCCCCCTCCCA i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 172655 13 - 2515279 GACCACTCTCCCA i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 330668 13 + 6586416 GACCCCCCTCCAA i colAng1.NW_012117710v1 I 112 C 0 s calJac3.chrUn_GL286444 61151 12 + 138751 GACTCACCTCGA- i calJac3.chrUn_GL286444 I 40 C 0 s saiBol1.JH378296 375347 12 - 2409723 GACTCACCTCGA- i saiBol1.JH378296 I 40 C 0 s otoGar3.GL873611 2269714 13 - 8137123 AGCCCACTTTCCA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e cebCap1.NW_016107703v1 537136 50 - 2125214 I a score=306960.000000 s hg38.chr7_KI270899v1_alt 163865 37 + 190869 gctc-----ccCTTGTCTGGGAAGCAGCTCTCTCCAGTGTAG s panTro5.chr7_NW_015973580v1_random 39497 37 - 83720 GCTC-----CCCTTGTCTGGGAAGCAGCTCTCTCCAGTATAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554365 37 + 162613886 gctc-----ccCTTGTCTGGGAAGCAGCTCTCTTCAGTGTAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125904 37 - 432965 gctc-----cccTTGTCTGGGAAGCAGCTCTCTCCAGCGTAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185427 36 + 85365473 gctccccgacccccctcc------cGGCTTTCTCCAGTGTAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34032183 37 + 185818997 GCTC-----CCCTCGTCTGGAAAGCAGCTCTCTCCAGCGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33648133 37 + 192294377 GCTC-----CCCTCGTCTGGAAAGCAGCTCTCTCCAGCGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4415724 37 - 9440265 GCTC-----CCCTCGTCTGGAAAGCAGCTCTCTCCAGCGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17003865 37 - 21915920 GCTC-----CCCTCGTCTGGGAAGCAGCTCTCTCCAGCGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 138500 37 - 21531802 GCTC-----CCCTCGTCTGGGAAGCTGCTCTCTCCAGCGCGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 172668 37 - 2515279 GCTA-----CCCTCGTCTGGGAAGCAGCTCTCTCCAGCGCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 330681 37 + 6586416 GCTC-----CCCTTGTCTGGGAAGCTGCTCTCTCCAGCGCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 61163 37 + 138751 GCTC-----CCCTTGTCTGGGAAGCAGCTCCCTCCACTGCAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 375359 37 - 2409723 GCTC-----CCCTCATCTGGGAAGCAGCTCCCTTCACTGCAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 537186 37 - 2125214 GCTC-----CCCTCATCTGGGAAGCAGCTCCCTCCACTGCAG i cebCap1.NW_016107703v1 I 50 C 0 s otoGar3.GL873611 2269727 36 - 8137123 ------GCGCCCTTGTTTAGGAGGCAGCTCTGTTCAGTGTAG i otoGar3.GL873611 C 0 I 275 e canFam3.chr6 61055783 317 - 77573801 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=1415578.000000 s hg38.chr7_KI270899v1_alt 163902 224 + 190869 CCACTCAACACGGCTGGTTTCATTGCAGCAGCGCACGCCCACCTGTGGCCACCCCGGCCTCCTCCCCGACACCCACACGGAAGGCCGTGTCCCCTCCCCTCCGTGTCCTGGGCGCAAAGGGCGCCCGGAGTGCCTGCGTGTGGACGCACAAGCCCAGGGCCACGGCGCTGCAGGGCAGCCCTTTTCTCACTGCAAGCCTGCACCCTTCT--------CTCACTGCTTTCCAG s panTro5.chr7_NW_015973580v1_random 39534 224 - 83720 CCACTCAACACGGCTGGTTTCATTGCAGCAGCGCACGCCCACCTGTGGCCACCCCGGCCTCCTCCCCGACACCCACACGGAAGGCCGTGTCCCCTCCCCTCCGTGTCCTGGGCGCAAAGGGCGCCCAGAGTGCCTGCGTGTGGACGCACAAGCCCAGGGCCACGGTGCTGCAGGGCAGCCCTTTTCTCACTGCAAGCCTGCACCCTTCT--------CTCTCTGCTTTCCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554402 224 + 162613886 TCACTCAACATGGCTGGTTTCATTGCAGCAGCGCACGCCCACCTGTGGCCACCCCGGCCTCCTCCCCGACACCCACACGGAAGGCCGTGTCCCCTCCCCTCCGTGTCCTGGGCGCAAAGGGTGCCCGGAGTGCCTGCGTGTGGACGCACAAGCCCAGGGCCACGGCGCTGCAGGGCAGCCCTTTTCTCACTGCAAGCCTGCACCCTTCT--------CTCTCTGCTTTCCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 125941 217 - 432965 CCACTCAACACAGCTTGTTTCATTGCAGCAGCGCACGCCCACCTGTGGCCACCCCGGCCTCCTCCCCGACACCCACACGGAAGGCCATGTCCCTCCC---------------CGCAAAGGGCGCCCGGAGTGCCTGCGTGTGGACGCACAAGCCCAGGGCCACGGCGCTGCAGGGCAGCCCTTTTCTCACTGCAAGCCTGCACCCTTCTCGCAGGTGCTCACTGCTTTCCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185463 210 + 85365473 CCACTCAAGACGGCTGGTCTCATTGCAGCAGCGCACGCCCACCCATGGCCACCCCGGCCTCCTCCCCGATACCCACACGGAAGGCCGTGTCCCCTCCC--------------CGCAAAGGGCGCCCGGAGCGCCTGTGTGTGGACGCATAAGCCCAGGGCCACGGCACTGCAGGGCAGCCCTTTTCTCACTGAAAGCCTGCACCCTTCT--------CTCACTGCTTTCCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34032220 207 + 185818997 CCACTCAACACGGATGGTCTCAGAGCAGCAGCGCACACCCACCCGCGGCCACCCCGGGCTCCT-CCCGACACCCCCACGAAAGGCTGTGTCTCCACCC--------------CACGAAGGGCTCCTGGAGTGCCTGTGTGTGGA--GACAAGCCCAGGGCCATGGCACTGCAGGGCAGCCCTTTTCTCGCTGAAAGCCTGCACCCTCCT--------CTCAGTGCTTTCCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33648170 207 + 192294377 CCACTCAACACGGCTGGTCTCAGAGCAGCAGCGCACACCCACCCGCGGCCACCCCGGGCTCCT-CCCGACACCCCCACGAAAGGCTGTGTCTCCACCC--------------CACGAAGGGCTCCTGGAGTGCCTGTGTGTGGA--GACAAGCCCAGGGCCATGGCACTGCAGGGCAGCCCTTTTCTCACTGAAAGCCTGCACCCTCCT--------CTCAGTGCTTTCCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4415761 207 - 9440265 CCACTCAACGCGGCTGGTCTCAGAGCAGCAGCGCACACCCACCCGCGGCCACCCCGGGCTCCT-CCCGACACCCCCACGAAAGGCTGTGTCTCCACCC--------------CACGAAGGGCTCCTGGAGTGCCTGTGTGTGGA--GACAAGCCCAGGGCCATGGCACTGCAGGGCAGCCCTTTTCTCACTGAAAGCCTGCACCCTCCT--------CTCAGTGCTTTCCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17003902 207 - 21915920 CCACTCAACATGGCTGGTCTCAGAGCAGCAGCGCACGCCCACCCGCGGCCACCCCGGGCTCCT-CCCGACACCCCCACGGAAGGCTGTGTCTCCACCC--------------CACGAAGGGCGCCCGGAGTGCCTGTGTGTGGA--GACAAGCCCAGGGCCATGGCACTGCAGGGCAGCCCTTTTCTCATTGAAAGCCTGCACCCTCCT--------GTCAGTGCTTTCCAG i cerAty1.NW_012002954v1 C 0 I 45 s chlSab2.chr28 138537 183 - 21531802 CCACTCAACACGGCTGGTCTCAGAGCAGCAACGCACGCCCACCTGCGGCCACCCCGGCCTCCT-CCCGACGCCCCCACGGAAGGCTGTGTCTCCACCC--------------CACGAAGGGCGCCCGGAGTGCCTGTGTGTGGA--GACAAGCCCAGGGCCACGGCACTGCAGGGCAGCCCTTTTCTCAC--------------------------------TGCTTTCCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 172705 207 - 2515279 CCACTCAACACGGCTGGTCTCAGAGCAGCAGCGCACGCCCACCCGCGGCCACCCCGGGCTCCT-CCCGACACCCCCACGGAAGGCTGTGTCTCCACCC--------------CACGAAGGGCGCCCGGAGTGCCTGTGTGTGGA--GACAAGCCCAGGGCCATGGCACTGCAGGGCAGCCCTTTTCTCACTGAAAGCCTGCACCCTCCT--------CTCAGTGCTTTCCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 330718 207 + 6586416 CCACTCAACACGGCTGGTCTCAGAGCAGCAGCGCACGCCCACCCGCGGCCACCCCGGCCTCCG-CCCGACACCCCCACGGAAGGCTGTGTCTCCGCCT--------------GGCGAAGGGCGCCCGGAGTGCCTGTGTGTGGA--GACAAGCCCAGGGCCACGGCACTGCAGGGCAGCCCTTTTCTCACTAAAAGCCTGCACCCTTCT--------CTCACTGCTTTCCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 61200 179 + 138751 CCACTCAACACAGCTGGTCTCATTGCCGCAGGGCATGCCCCTCTGTGGCCATCCAGGCCTCCTCCCCAACACACCCACAGAAGTCTGTGTCCCATCCC--------------CGCAAAGGGCTCCCAGAGTGCCCCTGTGTGGACGTCTACACCCAGGGCCACAGCACTGAA------CCCTTT---------------------------------CTCACTGTTTTCCAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 375396 177 - 2409723 CCACTCAACACAACTGGTCTCACTGCCGCAGGGCACACCCATCTGTGGGCATCCCGGCCTCCTCCCTGACACACCCACAGAAGGCTGTGTCCCGTCCC--------------CGCAAAGGGCTCC--GAGTGTCCCTGTGTGGACGTCCACACCCAGGGCCACAGCACTACA------CCCTTT---------------------------------CTCATTGTTTTCCAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 537223 179 - 2125214 CCACTCAACAAAACTAGTCTAATTGCCGCAGGGCACGCCCATGTGTGGCCATCCCAGCCTCCTCCCCGACACACCCACAGAAGGCTGTGTCCCGTCCC--------------CGCAAAGGGCTCCCAGAGTGCCCCTGTGTGGACGTCCACACCCAGGGCCACAGCCCTGCA------CCCTTT---------------------------------CTCATTGTTTTCCAG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=191806.000000 s hg38.chr7_KI270899v1_alt 164126 24 + 190869 -GGGGAGCTCTCTCAGGT--------------CCAGAGC s panTro5.chr7_NW_015973580v1_random 39758 24 - 83720 -GGGGAGCTCTCTCAGGT--------------CCAGAGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554626 24 + 162613886 -CGGGAGCTCTCTCAGGT--------------CCAGAGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 126158 38 - 432965 -GGGGAGCTCTCTCAGGCCCAGGGGGTGTTGGCCAGAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185673 38 + 85365473 -GGGAAGCTGTCTCAGGTCCAGGGGGTGTTGGCCAGAGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34032427 38 + 185818997 -GAGGGGCTCCCTCAGGTCCGGGGGGTGTTGGCCAGAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33648377 38 + 192294377 -GAGGGGCTCCCTCAGGTCCGGGGGGTGTTGGCCAGAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4415968 38 - 9440265 -GAGGGGCTCCCTCAGGTCCGGGGGGTGTTGGCCAGAGC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 138720 37 - 21531802 -GAGGGGCTCCCTCAGG-CCGGGGGGTGTTGGCCAGAGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 172912 38 - 2515279 -GAGGGGCTCCCTCAGGTCCGGGGGGTGTTGGCCAGAGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 330925 38 + 6586416 -GAGGGGCTCCCTCAGGTGCGGGGGGTGTTGGCCAGAGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 61379 39 + 138751 GAGGGAGCTCTCTCAGGCCCAGGGGGTGTTGATCAGAGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 375573 38 - 2409723 GAGGGAGCTCTTTCAGGCCCA-GGGGTGTTGATCAGAGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 537402 38 - 2125214 GAGGGAGCTCTCTCAGGCCCA-GGGGTGTTGATCAGAGC i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e cerAty1.NW_012002954v1 17004109 45 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=414366.000000 s hg38.chr7_KI270899v1_alt 164150 47 + 190869 CCCACGGCTCACACCTCCTCTCCTGCCTCTGGCTTCCTGTCTTCAGG s panTro5.chr7_NW_015973580v1_random 39782 47 - 83720 CCCATGGCTCACACCTCCTCTCCTGCCTCTGGCTTCCTGTCTTCAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554650 47 + 162613886 CCCATGGCTCACACCTCCTCTCCTGCCTCTGGCTTCCTGTCTTCAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 126196 47 - 432965 CCCACGGCTCACACCTCCTCTCCTGCCTCTGGCTTCCTGTCTTCAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185711 47 + 85365473 CCCACGGCTCACACCTCCTCTCCTGCCTCTGGCTTCCTGTCTTCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34032465 47 + 185818997 CCCACGGCTCACACCTCCTCTCCTGTCTCTGGCTTCCTGTCTTCAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33648415 47 + 192294377 CCCACGGCTCACACCTCCTCTCCTGTCTCTGGCTTCCTGTCTTCAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416006 47 - 9440265 CCCACGGCTCACACCTCCTCTCCTGTCTCTGGCTTCCTGTCTTCAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17004154 47 - 21915920 CCCACGGCTCACCACTCCTTTCCTGTCTCTGGCTTCCTATCTTCAGG i cerAty1.NW_012002954v1 I 45 I 964 s chlSab2.chr28 138757 47 - 21531802 CCCACGGCTCACACCTCCTCTCCTGTCTCTCGCTTCCTGTCTTCAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 172950 47 - 2515279 CCCACGGCTCACACCTCCTCTCCTGTCTCTGGCTTCCTATCTTCAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 330963 47 + 6586416 CCCGCGGCTCACACTTCCTCTCCTGTCTCTGGCTTCCTGTCTTCAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 61418 47 + 138751 CCCAAAGCTCACACCTCCTCTTCTGTCTCTGCCTTCATGTCTTCAGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 375611 47 - 2409723 CCCACAGCTCACACCTCCTCTCCCGTCTGTGCCTTCATGTCTTCAGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 537440 47 - 2125214 CCCATAGCTCATACCTCCTCTCCTATCTCTGCCTTCATGTCTTCAGG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=659692.000000 s hg38.chr7_KI270899v1_alt 164197 93 + 190869 AGGATATTTCAAGTTCCAAGAAGGTACTCAGTAACTTCTTTGACTAATATTATGTTGAGAAATGATCATTTTACTTTCAGGTGCTTTTTAAAA s panTro5.chr7_NW_015973580v1_random 39829 93 - 83720 CGGATATTTCAAGTTCCAAGAAGGTACTCAGTAACTTCTTTGACTAATATTATGTTGAGAAATGATCATTTTACTTTCAGGTGATTTTTAAAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554697 93 + 162613886 CGGATATTTCAAGTTCCAAGAAGGTACTCAGTAACTTCTTTGACTAATATTATGTTGAGAAATGATCATTTTACTTTCAGGTGATTTTTAAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 126243 93 - 432965 CGGATATTTCAAGTTCCAAGAAGGTACTCAGTAACTTCTTTGACTAATATTATGTTGAGAAATGATCATTTTACTATCAGGTGATTTTTAAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185758 93 + 85365473 CAGATATTTCAAGTTCCAAGAAAGTACTTAGTAACTCCTTTGAGTAATATTCTGTTGAGAAATGATCATTTTACTTTCAGGTGATTTTTTAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34032512 93 + 185818997 AGGGTATTTCAAATTCCAAGAAAGCACTTAGTAACTTCTTTGTGTAATATTATGTTGAGAAATGATCATTTTACTTTCAGGTGACTTTTAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33648462 93 + 192294377 AGGATATTTCAAATTCCAAGAAAGCACTTAGTAACTTCTTTGTGTAATATTATGTTGAGAAATGATCATTTTACTTTCAGGTGACTTTTAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416053 93 - 9440265 AGGATATTTCAAATTCCAAGAAAGCACTTAGTAACTTCTTTGTGTAATATTATGTTGAGAAATGATCATTTTACTTTCAGGTGACTTTTAAAA i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 138804 93 - 21531802 AGGATGTTTCAGATTCCAAGGAAGCACTTAGCAACTTCTTTGTGTAATATGACGTTGAGAAATGATCATTTTACTTTCAGGTGATTTTTAAAA i chlSab2.chr28 C 0 I 4 s manLeu1.NW_012101810v1 172997 93 - 2515279 AGGATATTTCAAATTCCAAGAAACCACTTAGTAACTTCTTTGTGTAATATTATGTTGAGAAATGATCATTTTACTTTCAGGTGACTTTTAAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 331010 93 + 6586416 CGGATATTTCAAATTCCAAGAAAGCATTTAGTAACTTCTTTGAGTGATATTATGTTGAGAAATGATCATTTTACTTTCAGGTGATTTTTAAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 61465 93 + 138751 TGGGTATTTCAAATCCCAAGAAAGTACTTAGTAACTTCTTTGAGTAATATTATATTGAGAAATTATTATTTTACTTTCAGGTGATTTTTAAAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 375658 93 - 2409723 TGGGTACTTCAAATTCTAAGAAAGTAGGTAGTAACTTCTTTGAGTAATATTATATTGAGAAATGATCATTTTACTTTCAGGTGATTTTTAAAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 537487 93 - 2125214 TGGGTATTTCAAATTCTAAGAACATACGTAGTAACTTCTTTGAGTAATATTATATTGAGAAATGATTCTTTTACTTTCAGGTGATTTTTAAAC i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e cerAty1.NW_012002954v1 17004201 964 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=213643.000000 s hg38.chr7_KI270899v1_alt 164290 40 + 190869 GCTACATTCACAGAAA--TTTTAAAAAATCTCAATATGCGGT s panTro5.chr7_NW_015973580v1_random 39922 40 - 83720 GTTACATTCACAGAAA--TTTTAAAAAATCTCAATATGCGGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554790 40 + 162613886 GCTACATTCACAGAAA--TTTTTAAAAATCTCAATATGCGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 126336 40 - 432965 GTTACATTCACAGAAA--TTTTAAAAAATCTCAATATGCGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185851 39 + 85365473 ATTACATTCACAGAAA---TTAAAAAAATCTCAATATGCAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34032605 40 + 185818997 ATTACATTCACAGAAA--TTTTAAAAAATCTCAATATGCAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33648555 40 + 192294377 ATTACATTCACAGAAA--TTTTAAAAAATCTCAATATGCAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416146 40 - 9440265 ATTACATTCACAGAAA--TTTTAAAAAATCTCAATATGCAGC i macNem1.NW_012019910v1 C 0 C 0 s manLeu1.NW_012101810v1 173090 40 - 2515279 ATTACATTCACAGAAA--TTTTAAAAAATCTCAATATGCAGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 331103 39 + 6586416 ATTACATTCACAGAAA--TTTT-AAAAATCTCAATATGCAGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 61558 41 + 138751 TTTACATTTACAGAAAATTTTTTTT-AATCTCAATATGAAGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 375751 42 - 2409723 GTTACATTCACAGAAAATTTTTTTTAAATCTCAATATGAAGT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 537580 42 - 2125214 ATTACATTCACAGAAATTTTTTTAAAAATCTCAATATGAAGT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 138897 4 - 21531802 I e cerAty1.NW_012002954v1 17004201 964 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=3440067.000000 s hg38.chr7_KI270899v1_alt 164330 559 + 190869 CATCTGCGTTTTCTGCTGGGGCACGCTTCAGTTCTGTGTTGGACA-CTGCGGAGAGTAGAGGGCTGGGCACAGCATCTGCACGGAGCCGGGCGCAGCACCTGCACGTGCAGACAGG-GGAGGGCCCCTGGAGGGCTCAGCTCCCGCGTGAGGGTCCAGCCTGGACACAAGGTTGAGACGCACATG-GGGACAAGTGGGAGGTATTGGGTGGGGCACAGGGGCTAGGAG------------------------GCCAAGGGCTTGC-------TCCTGGAATTCTATA-------------------------------------------------CAGGCCTGCAAACCCTGCTCAGTGGAACACCACACCAGACACAGTTCTGGGGCTGGAGGAGCCGCAGCCACCCCGGGACCCCCACCATCCTGGCATCAAGGGCCTCAGACTCTGCTCTCTGTAAGCTCCCTC--------------------TGGAGGGAGCAGAGCCAGTGAGATCTGGAGAACAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGGGGACACTTCGTGTTCGTGGGAACGTCCAGCTGCCATGAGGGTCCCTGGGGCAAGCTGGAGGTACGTGCGGAGAAGGGGGCCAGCTCCTCTCAGGCAGCCCACTCCAGCC s panTro5.chr7_NW_015973580v1_random 39962 558 - 83720 CATCTGCGTTTTCTGCTGGGGCACGCTTCAGTTCTGTGTTGGACA-CTGCGGAGAGTAGAGGGCCGGGCACAGCATCTGCAC-GAGCCGGGCGCAGCACCTGCAGGTGCAGACGGG-GGAGGGCCCCTGGAGGGCTCAGCTCCCATGTGAGAGTCCAGCCTGGACACAAGGTTGAGAAGCACATG-GGGACAAGTGGGAGGTATTGGGTGGGGCACAGGGGCTAGGAG------------------------GCCAAGGGCTTGC-------TCCTGGAATTCCATA-------------------------------------------------CAGGCCTGCAAACCCTGCTCAGTGGAACACCACACCAGACACAGTTCTGGGGCTGGAGGAGCCGCAGCCACCCCGGGACCCCCACCATCCTGGCATCAAGGGCCTCAGACTCTGCTCTCTGTAAGCTCCCTC--------------------TGGAGGGAGCAGAGCCAGTGAGATCTGAAGAACAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGGGGACACCTCGTGTTCGTGGGAACGTCCAGCTGCCATGAGGGTCCCTGGGGCAAGCTGGAGGTACGTGCGGAGAAGGGGGCCAGCTCCTCTCAGGCAGCCCACTCCAGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 554830 559 + 162613886 CATCTGAGTTTTCTGCTGGGGCACGCTTCAGTTCTGTGTTGGACA-CTGTGGAGAGTAGAGGGCCGGGCACAGCATCTGCACAGAGCCGGGCGCAGCACCTGCACGTGCAGACGGG-GGAGGGCCCCTGGAGAGCTCAGCTCCCGCGTGAGGGTCCAGCCTGGACACAAGGTTGACACGCACATG-GGGACAAGTGGGAGGTATTGGGTGGGGCACAGGGGCTAGGAG------------------------GCCAAGGGCTTGC-------TCCTGGAATTCCATA-------------------------------------------------CAGGCCTGCAAACCCTGCTCAGTGGAACACCACACCAGACACAGTTCTGGGGCTGGAGGAGCCGCAGCCACCCCGGGACCCGCACCATCCTGGCATCAAGGGCCTCAGACTCTGCTCTCTGTAAGCTCCCTC--------------------TGGAGGGAGCAGAGCCAGTGAGATCTGGAGAACAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGAGGACACCTCGTGTTCGTGGGAACGTCCAGCTGCCATGAGGGTCCCTGGGGCAAGCTGGAGGTACGTGCGGAGAAGGGGGCCAGCTCCTCTCAGGCAGCCCACTCCATCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 126376 573 - 432965 CATCTGCGTTTTCTGCTGGGGCACGCTTCAGTTCTGTGTTGGACA-CTGCGGAGAGTAGAGGGCCAGGCACAGCATCTGCACAGAGCCGGGCGCAGCACCTGCACGTGCAGATGGG-GGAGGG-CCCTGGAGGGCTCAGCTCCCGTGTGAGGGTCCAGCCTGGACACAAGGTTGAGACGCACATG-GGGACAAGTGGGAGGTATTGGGTGGGGCACAGGGGCTAGGAG------------------------GCCAAGGGCTTGC-------TCCTGGAATTCCATA-------------------------------------------------CAGGCCTGCAAACCCTGCTCAGTGGAACACCACACCAGACACAGTTCTGGGGCTGGAGGAGCCGCAGCCA-CTCGGGACCCCCACCATCCTGGCATCAAGGGCCTCAGACTCTGCTCTCTGTAAGCTCCCTCTGGAGGAAAGAGAGTCTCCTTGGAGGGAACAGAGCCAGTGAGATCTGGAGAACAGAGGGTACCTGGGCCCTTCCT-GAGAGT-------GGGGG--ACCTCGTGTTCGTGGGAACGTCCAGCTGCCATGAGGGTCCCTGGGGCAAGCTGGAGGTACGTGTGGAGAAGGGGG-CAGCTCCTCTCAGGCAGCCCACTCCAGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 185890 527 + 85365473 CATCTGTGTTTTCTGCTGGGGCAGGCTTCAATTCTGTATTGGACA-CTGCGGAGGGTAGAGAGCCGGGCACA-----------------------------GCACGTGCAGACCGG-GGAGGGCCCCTGGAGGGCTCAGCTCCTGCATGAGGGTCCAGCCTGGTTGCAAGGTTGAGACGCACTTG-GGGACAAGTGGGAGGTATTGGGTGGGGCACAGGGGCTAGGAG------------------------GCCAAGGGCTTGC-------TCCTGGAATTCCATA-------------------------------------------------GTGGCCTGCAAACCCTGCTCAAGGGAACACCACACCAGACGCAGCTCTGGGGCTGGAGGAGCCGCAGCCACCCCGGGACCCCCACCATCTTGGCATCAAGGGCCTCAGACTCTGCTCTCTGTAAGCTTCCGC--------------------TGGAGGGAGCAGAGCCAGTGAGATTTGGAGAACAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGGGGGCACCTCGTGTTCACGGGAACGTCCAGCTGCCATGAGGGCCCCTGGGGCAAGCTGGAGGTACCTGCGGAGGAGGG---CAGCTCCTCTCAGGCAGCCCACTCCagcc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34032645 537 + 185818997 CATCTGCTTTTTCAGCTGGGGCATGCTTCAATTCTGTATTGGACA-CCAAGGAGAGCAGAGAGCCGGGCGCA-----------------------GCACCTGCACGTGCAGATAGGCGGAGGGCCCCCGGAGGGCTCAGCTCCCTCCTGAGGGTCCAGCCTGGATGCAAGGTTGAGACGCACGTG-GGGACCAGCGGGAGGTATCGGGCAGGGTGCGGGGGCTGGGAG------------------------GCCAGGGTTGTGC-------TCCTGGAATTCCATA-------------------------------------------------CTGGTCTGCAAACCCTGCTCAGTGGAACACCACACCAGACACAGCTCTGGGGCTGGAGGAGCCGCGGCCGCCCCGGGACCCCCACCATCCTGGCATCAAGGGTCTCAGACTCTGCTCTGTGTAAGCTCCCTC--------------------CGGGGGGAGCAGAGCCGGTGAGATTTGGAGGCCAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGGGGGCACCTGGTGTTCACGGGAACATCCCGCTGCCATGAGGGTCCCCGGGGCAAGCTGGAAGTACATTCGGAGAAGGGGGGCTGCTCCTCTCAGGTAGCCCACTCCAGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33648595 537 + 192294377 CATCTGCTTTTTCAGCTGGGGCATGCTTCAATTCTGTATTGGACA-CCAAGGAGAGCAGAGAGCCGGGCGCA-----------------------GCACCTGCACGTGCAGATAGGCGGAGGGCCCCCGGAGGGCTCAGCTCCCTCCTGAGGGTCCAGCCTGGATGCAAGGTTGAGACGCACGTG-GGGACCAGCGGGAGGTATCGGGCAGGGTGAGGGGGCTGGGAG------------------------GCCAGGGTTGTGC-------TCCTGGAATTCCATA-------------------------------------------------CTGGTCTGCAAACCCTGCTCAGTGGAACACCACACCAGACACAGCTCTGGGGCTGGAGGAGCCGCGGCCGCCCCGGGACCCCCACCATCCTGGCATCAAGGGTCTCAGACTCTGCTCTCTGTAAGCTCCCTC--------------------CGGGGGGAGCAGAGCCGGTGAGATTTGGAGGCCAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGGGGGCACCTGGTGTTCACAGGAACGTCCCGCTGCCATGAGGGTCCCCGGGGCAAGCTGGAAGTACATTCGGAGAAGGGGGGCTGCTCCTCTCAGGTAGCCCACTCCAGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416186 536 - 9440265 CATCTGCTTTTTCAGCTGGGGCATGCTTCAATTCTGTATTGGACA-CCAAGGAGAGCAGAGAGCCGGGCGCA-----------------------GCACCTGCACGTGCAGATAGGCGGAGGGCCCCCGGAGGGCTCAGCTCCCTCCTGAGGGTCCAGCCTGGATGCAAGGTTGAGACGCACGTG-GGGACCAGTGGGAGGTATCGGGCAGGGTGAGGGGGCTGGGAG------------------------GCCAGGGTTGTGC-------TCCTGGAATTCCATA-------------------------------------------------CTGGTCTGCAAACCCTGCTCAGTGGAACACCACACCAGACACAGCTCTGGGGCTGGAGGAGCCGCGGCCGCCCCGGGACCCCCACCATCCTGGCATCAAGGGTCTCAGACTCTGCTCTCTGTAAGCTCCCTC--------------------CGGGGGGAGCAGAGCCGGTGAGATTTGGAGGCCAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGGGGGCACCTGGTGTTCACAGGAACGTCCCGCTGCCATGAGGGTCCCCGGGGCAAGCTGGAAGTACATTCGGAGAA-GGGGGCTGCTCCTCTCAGGTAGCCCACTCCAGCC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 138901 520 - 21531802 CATCTGCTTTTTCGGCTGGGG-----------TTAGGGTTGGACA-CTGCAGAGAGCAGAGCGCCGGGCGCA-----------------------GCACCTGCACGTGCAGATGGGCGGA-GGCCCCCGGAGGGCTCAGCTCCCTCGTGAGGGTCCAGCCTGGATGCAAAGTTGAGACGCAGGTG-GGGACAAGCGGGAGGTATCGGGCAGGGTGCGTGGGCTCGGAG------------------------GCCAGGG-TTTGC-------TCCTGGAATTCCATA-------------------------------------------------CCGGCCTGCAAACCCTGCTCAGTGGAACACGACACCAGACACAGCTCTGGGGCTGGAAGAGCCGCGGTTGCTCCGGGACCCCCACCATCCTGGCATCAAGGGCCTCAGACTATGCTCTCTGTAAGCTCCCTC--------------------CGTGGGGAGCAGAGCCGGTGAGATTTGGAGGCCAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGGGGGCACCTGGTGTTCACGGGAACATCCCGCTGCCATGAGGGTCCCCGGAGCAGGCTGGAGGTACGTGCAGAGAA-GGGGGCAGCTCCTCTCAGGCAGCCCACCCCA--- i chlSab2.chr28 I 4 C 0 s manLeu1.NW_012101810v1 173130 537 - 2515279 CATCTGCTTTTTCAGCTGGGGCATGCTTCAATTCTGTATTGGACA-CCACAGAGAGCAGACAGCCAGGCGCA-----------------------GCACCTGCACATGCAGATAGGCGGAGGGCCCCCGGAGGGCTCAGCTCCCTCCTGAGGGTCCAGCCTGGATGCAAGGTTGAGACGCACGTG-GGGACCAGCGGGAGGTATCGGGCAGGGTGCGGGGGCTGGGAG------------------------GCCAGGGTTTTGC-------TCCTGGAATTCCATA-------------------------------------------------CTGGTCTGCAAACCCTGCTCAGTGGAACACCACACCAGACACAGCTCTGGGGCTGGAGGAGCCGCGGCCGCCCCGGGACCCCCACCATCCTGGCATCAAGGGTCTCAGACTCTGCTCTCTGTAAGCTCCCTC--------------------CGGGAGGAGCAGAGCCGGTGAGATTTGGAGGCCAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGGGGGCACCTGGTGTTCACGGGAACATCCCGCTGCCATGAGGGTCCCCGGAGCAAGCTGGAAGTACATGCGGAGAAGGGGGGCTGCTCCTCTCAGGTAGCCCACCCCAGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 331142 536 + 6586416 CATCTGCTTTTTCGGCTGGGGCATGCTTCAGTCCTGTACTGGACA-CCGCGGAGAG-AGAGAGCCAGACACA-----------------------GCACCTGCATGTGCAGACGGGCGGAGGGCCCCTGGAGGGCTTAGCTCCCTCGTGAGGGTCCAGCCTGGATGCAAGGTTGAGACACACGTG-GGGACAAGCGGGAGGTATCGGGCAGGGTGCAGGGGCTGGGAG------------------------GCCAGGGCTTTGC-------TCCTGGAATTTCATA-------------------------------------------------CCGGCCTGCAAACCCTGCTCAGTGGAACACCACGCCAGACACAGCTCTGGGGCTGGAGGAGCCGCGGCCGCCCCAGGACCCCCACCATCCTGGCATCAAGGGCCTTGGACTCTGCTCTCTGCAAGCTCCCTC--------------------CGGGGGGAGCAAAGCCGGTGAGATTTGGAGGCCAGAGGGTACCTGGGCCCTTCCTGGAGAGT-------GGGGGGCACCTGGTGTTCACGGGAACATCCCACTGCCATGAGGGTCCCCGGGGCAAGCTGGAGGTACGTGCAGAGAAGGGGGGAAGCTCCTCTCAGGCGGCCCACCCCAGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 61599 613 + 138751 CATGTGCTTTTTCTGCTGGGGCAGGGTTTAGTTCTGCATTGAACAACCACAGAGAGCAGAGAGCCGGGCACA-----------------------GTGCCTGCACGTGCAGATGGGCGGAGGTTCCCTGGAAAGCCCAGCTCCCATGTGAGGGTCCAGCCTGGATGGAAGGTTG-GACGCACATGTGGGACAAGCAGAAGTTACTGGAAGGGGTGCGGAGGCTGGGAGTCCGTCATTCCTAAGCCACACTCAGCAGGTGACATGCAGCAAGACCCTGGGACCCCAGGCTCCATGCATGCCAGGGAGAGGTAGTAGCATCTGAGGGCATTCTGCTGCCTGACCT-CCAACCCTGCTCAAGGGAACATGACACCAGACACAGCTCTGGGGTTGGAGGAGCCACAGCTG--------CCCCTGCCATCCTGGCATCATGGGTCTTGGACTCTGCTCTCTATAAATTCCTTC--------------------TGGAGGGAGCAGAGCC-TTGAGATTTGGAGACCAGCAGGCTCCTGGGCCCTTCCTGGAGAGTGGGGATGGGGGGGTGTCTCACATTCACAGGAACATCCAGCTAACCTGAGGGTCCCTGA-GCAAACCAGAGGTATGTGCAGAGAAGGAAG-CATCTCCTCTCAGGCAGTGCACCCTGGCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 375793 533 - 2409723 CATCTGCTTTTTCTGCTGGGGCACGGTTCAGTTCCGCATTGGACACCCACAGAGAGCAGAGAGCCGGGCACA-----------------------GCGCCTGCACATGCAGATGGGCGGAGATTCGCTGGAGGGCCCAGCTCCCATGTGAGGGTCCAGCCTGGACGAAAGGTTGAGACGCACATGTGGGACAAGCAGAAGTTACTGGAAGGGGTGCGGGAGCTGGGAG------------------------GCCAGGGGCTTGC-------TCCTGGAATTCCACA-------------------------------------------------CTGACCT-CCAATCCTGTTCAAGGGAATACAACACCAGACGCAGCTCTGGGGCTGGGGGAGCCACAGCTG--------CCCCTGCCATCCTGGCATCACAGGCCTTGGACTCTGCTCTCTGTAACTTCCCTC--------------------TGGAGGGAGCAGAGCT-GTGAGATTTGGAGACCAGAGGACTCCTGGGCCCTTACTGGAGAGTGGGGGT-GAGGGGTGCCTCACATTCACAGGAGCATCCAGCTGACCTGAGGGTCCCTGG-GCAAACCGAAGGTACATGCAGAGAAGGGGG-CAGCTCCTCTCAGGCAGCCCACCCCGGCC i saiBol1.JH378296 C 0 I 499 s cebCap1.NW_016107703v1 537622 528 - 2125214 CATCTGCTTTTTCTGCTGGGGCACGGTTCAGTTCCGCATTGGACACCCACAGAGAGCAGAGAGCCAGACACA-----------------------GTGCCTGCACGTGCAGATGGGCAGAGGTTCGCTGGAGGGCCCAGCTCCCATGTGAGGGTCCAGCCTAGATGGAAGGTTGAGACGCACATGTGGGACAAGCAGAAGTTACTGGAAGGGGTGCGGGGGCTGGGAG------------------------GCCAGGGGCTTGC-------TCCTGTAATTCCACA-------------------------------------------------CTGACCT-CCAACCCTGCTCAAGGGAACACGACACCAGACGCAGCTCTGGGGCTGGAGGAGCCACAGCTG--------CCCCTGCCATCCTGGCATCACGGGCCTCGGACTCTGCTCTCTATAAATTCCCTC--------------------TGGAGGGAGCAGAGCT-GTGAGATTTGGAGACCAGAGGGCTCCTGGGCCCTTCCTGGAGAGTGGGGGTGGGGGGGTGCCTCATGTTCACTGGAACATCCAGCTGACCTGAGGATCCCTGG-GCAAACCGG------GTGCAGAGAAGGGGG-CAGCTCCTCTCAGGCAGCCCACCCCGGCC i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e cerAty1.NW_012002954v1 17004201 964 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=1221.000000 s hg38.chr7_KI270899v1_alt 164889 1 + 190869 T s panTro5.chr7_NW_015973580v1_random 40520 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555389 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 126949 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186417 1 + 85365473 c i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033182 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649132 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416722 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s manLeu1.NW_012101810v1 173667 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 331678 1 + 6586416 C i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139421 0 - 21531802 C e cerAty1.NW_012002954v1 17004201 964 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376326 499 - 2409723 I e cebCap1.NW_016107703v1 538150 0 - 2125214 C e calJac3.chrUn_GL286444 62212 0 + 138751 C a score=273690.000000 s hg38.chr7_KI270899v1_alt 164890 48 + 190869 ATCTGTGACACTGGCTTCACGAGGGGAGTGAGGAG---------------------------------------------------AGGGATGCGGGCC s panTro5.chr7_NW_015973580v1_random 40521 48 - 83720 ATCTGTGACACTGGCTTCACAAGGGGAGTGAGGAG---------------------------------------------------AGGGATGCGGGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555390 48 + 162613886 ATCTGTGACACTGGCTTCACGAGGGGAGTGAGGAG---------------------------------------------------AGGGATGCGGGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 126950 48 - 432965 ATCTGTGACACTGGCTTCGCGAGGGGAGTGAGGAG---------------------------------------------------AGGGATGCGGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186418 48 + 85365473 atctgtgacactggcttctcaagaggagtgaggag---------------------------------------------------agggatgcgggct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033183 48 + 185818997 GTCTGTGACACTGGCTTCTCGAGAGGAGTGAGGAG---------------------------------------------------AGGGATGTGGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649133 48 + 192294377 GTCTGTGACACTGGCTTCTCGAGAGGAGTGAGGAG---------------------------------------------------AGGGATGTGGGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416723 48 - 9440265 GTCTGTGACACTGGCTTCTCGAGAGGAGTGAGGAG---------------------------------------------------AGGGATGTGGGCC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 139421 44 - 21531802 ----GTGACATGGGCTTCTCGAGAGGAGTGAGGAG---------------------------------------------------AGGGATGTGGGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 173668 48 - 2515279 GTCTGTGACACTGGCTTCTCGAGAGGAGTGAGGAG---------------------------------------------------AGGGATGTGGGCC i manLeu1.NW_012101810v1 C 0 M 660 s colAng1.NW_012117710v1 331679 48 + 6586416 GTCGGTGACACTGGCTACTCGAGAGGAGTGAGGAG---------------------------------------------------AGGGATGCGGACC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62212 98 + 138751 ATCTGTGACACAGGCTTCAGGAGAGGAGTGATCAGGCAGCACACTCGAGCCATGTGTGACATCACCTTCAGCAGAGGAAAGAGGAGAGGGATGAAAGC- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 376825 38 - 2409723 ATCTGTGACACCGACTTCAGGAGAGGAGTGAGAAG------------------------------------------------------------AGC- i saiBol1.JH378296 I 499 C 0 s cebCap1.NW_016107703v1 538150 47 - 2125214 ATGTGTGACACCAGCTTCAGGAGAGGGGTGAGGAG---------------------------------------------------AGGGATGAGAGC- i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e cerAty1.NW_012002954v1 17004201 964 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=231752.000000 s hg38.chr7_KI270899v1_alt 164938 43 + 190869 CTTAGCAAACCAGGAAGCCTGAAAA--ACACCTATTGACAAGAGC s panTro5.chr7_NW_015973580v1_random 40569 43 - 83720 GTTAGCAAACCAGGAAGCCTGAAAA--ACACCAATTGACAAGAGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555438 43 + 162613886 GTTAGCAAACCAGGAAGCCTGAAAA--ACACCTATTGACAAGAGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 126998 43 - 432965 GTTAGCAAACCAGGAAGCCTGAAAA--ACACCTATTGACAAGAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186466 43 + 85365473 gttaggaaaccagcaagcctgaaaa--acacctattgacaagagc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033231 43 + 185818997 ATCGGGAAACCAAGAAGCCTGAAAA--ATAACTATTAACAAGAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649181 43 + 192294377 ATCGGGAAACCAAGAAGCCTGAAAA--ATAACTATTAACAAGAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416771 43 - 9440265 ATCGGGAAACCAAGAAGCCTGAAAA--ATAACTATTAACAAGAGC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 139465 43 - 21531802 GTCGGGAAACCACGAAGCCTGAAAA--GTAACTATTGACAAGAGT i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 331727 43 + 6586416 ATCGGGAAACCACGAAGCCTGAAAA--ATACCTGTTGACAAGTGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62310 43 + 138751 --TAGGAAACCAGGAAGTCTAAAAAATATACCTATTGACAAGAGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 376863 41 - 2409723 --TAGGAAACCAGGAAGTCTGAAAA--ATACCTATTAATAAGAGT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538197 41 - 2125214 --TAGGAAACCAGGAAGTCTGAAAA--ATACCTATTAACAAAAGT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17004201 964 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=109878.000000 s hg38.chr7_KI270899v1_alt 164981 14 + 190869 GGGTCAGAGGAGCT s panTro5.chr7_NW_015973580v1_random 40612 14 - 83720 GGGTCAGAGGAGCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555481 14 + 162613886 GGGTCAGAGGAGCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127041 14 - 432965 GGGTCAGAGGAGTT i gorGor5.CYUI01015914v1 C 0 I 33 s nomLeu3.chr20 186509 14 + 85365473 gggtcagaggagct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033274 14 + 185818997 GGGTCAGAGGAGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649224 14 + 192294377 GGGTCAGAGGAGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416814 14 - 9440265 GGGTCAGAGGAGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005165 14 - 21915920 GGGTCAGAGGAGCT i cerAty1.NW_012002954v1 I 964 C 0 s chlSab2.chr28 139508 14 - 21531802 CGGTCAGAGGAGCT i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 331770 14 + 6586416 GGGTCAGAGGAGCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62353 14 + 138751 TGGTTGGAGGAGCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 376904 14 - 2409723 GGGTCGGAGGAGCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538238 14 - 2125214 GGATCAGAGGAGCT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=6228.000000 s hg38.chr7_KI270899v1_alt 164995 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 40626 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555495 1 + 162613886 G i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 186523 1 + 85365473 g i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033288 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649238 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416828 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005179 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 139522 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 331784 1 + 6586416 G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62367 1 + 138751 A i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 376918 1 - 2409723 G i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538252 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e aotNan1.NW_018514293v1 119481 1131 + 376347 I e gorGor5.CYUI01015914v1 127055 33 - 432965 I a score=6600.000000 s hg38.chr7_KI270899v1_alt 164996 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 40627 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555496 1 + 162613886 G i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 186524 1 + 85365473 g i nomLeu3.chr20 C 0 I 3 s rheMac8.chr3 34033289 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649239 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416829 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005180 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 139523 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 62368 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 376919 1 - 2409723 G i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538253 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e aotNan1.NW_018514293v1 119481 1131 + 376347 I e gorGor5.CYUI01015914v1 127055 33 - 432965 I a score=4500.000000 s hg38.chr7_KI270899v1_alt 164997 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 40628 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555497 1 + 162613886 G i panPan2.chr7 C 0 C 0 s rheMac8.chr3 34033290 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649240 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416830 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005181 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 139524 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 62369 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 538254 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 I 5 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e nomLeu3.chr20 186525 3 + 85365473 I e gorGor5.CYUI01015914v1 127055 33 - 432965 I a score=10976.000000 s hg38.chr7_KI270899v1_alt 164998 4 + 190869 GAGA s panTro5.chr7_NW_015973580v1_random 40629 4 - 83720 GAGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555498 4 + 162613886 GAGA i panPan2.chr7 C 0 C 0 s rheMac8.chr3 34033291 4 + 185818997 GAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649241 4 + 192294377 GAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416831 4 - 9440265 GAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005182 4 - 21915920 GAGA i cerAty1.NW_012002954v1 C 0 I 247 s chlSab2.chr28 139525 4 - 21531802 GGGA i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 62370 4 + 138751 CAGA i calJac3.chrUn_GL286444 C 0 I 1 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e nomLeu3.chr20 186525 3 + 85365473 I e gorGor5.CYUI01015914v1 127055 33 - 432965 I a score=-4882.000000 s hg38.chr7_KI270899v1_alt 165002 1 + 190869 -C s panTro5.chr7_NW_015973580v1_random 40633 1 - 83720 -T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555502 1 + 162613886 -C i panPan2.chr7 C 0 C 0 s rheMac8.chr3 34033295 1 + 185818997 G- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649245 1 + 192294377 G- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416835 1 - 9440265 G- i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 139529 1 - 21531802 G- i chlSab2.chr28 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I e nomLeu3.chr20 186525 3 + 85365473 I e gorGor5.CYUI01015914v1 127055 33 - 432965 I a score=32751.000000 s hg38.chr7_KI270899v1_alt 165003 14 + 190869 GGCCCAGGTCAGCC s panTro5.chr7_NW_015973580v1_random 40634 14 - 83720 GGCCCAGGTCAGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555503 14 + 162613886 GGCCCAGGTCAGCC i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 186528 14 + 85365473 GGCCCAGGTCAGCC i nomLeu3.chr20 I 3 C 0 s rheMac8.chr3 34033296 14 + 185818997 AGCCCAGGCCGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649246 14 + 192294377 AGCCCAGGCCGGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416836 14 - 9440265 AGCCCAGGCCGGCC i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 139530 14 - 21531802 GGCCCAGGTCGGCC i chlSab2.chr28 C 0 I 41 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I e gorGor5.CYUI01015914v1 127055 33 - 432965 I a score=2100.000000 s hg38.chr7_KI270899v1_alt 165017 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 40648 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555517 1 + 162613886 C i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 186542 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033310 1 + 185818997 C i rheMac8.chr3 C 0 I 164 s macFas5.chr3 33649260 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4416850 1 - 9440265 C i macNem1.NW_012019910v1 C 0 I 163 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I e gorGor5.CYUI01015914v1 127055 33 - 432965 I a score=7229.000000 s hg38.chr7_KI270899v1_alt 165018 12 + 190869 AGTTCAGAGGGA s panTro5.chr7_NW_015973580v1_random 40649 12 - 83720 AGTTCAGAGGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555518 12 + 162613886 AGTTCAGAGGGA i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 186543 12 + 85365473 AGTCCAGAGGGA i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33649261 12 + 192294377 CATCCAGCTGGG i macFas5.chr3 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I e gorGor5.CYUI01015914v1 127055 33 - 432965 I a score=49482.000000 s hg38.chr7_KI270899v1_alt 165030 55 + 190869 -------GAGGGCCCAGGTCAGCCCAGTTCGGGGGGAGAGGGCCCAGGTCAGCCCAGTGCGG s panTro5.chr7_NW_015973580v1_random 40661 55 - 83720 -------GAGGGCCCAGGTCAGCCCAGTCCGGAGGGAGAGGGCCCAGGTCAGCCCAGTGCGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555530 55 + 162613886 -------GAGGGCCCAGGTCAGCCCAGTCCGGAGGGAGAGGGCCCAGGTCAGCCCAGTGCGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127088 49 - 432965 -------GAGGGCCCAG----GCCCAGTCCGGAGG--GGGGGCCCAGGTCAGCCCAGTCCGG i gorGor5.CYUI01015914v1 I 33 T 82 s nomLeu3.chr20 186555 55 + 85365473 -------GAGGACCCAGGTCAGCCCAGTCCAGAGGCAGAGGGCCCAGGTCAGCCCAGTCCAG i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33649273 57 + 192294377 GCTCCCGGAGGA--CGGGTCAGAGGAG-CTGGAGG--GAGAGCCCAGGTCGGCCCTGTCCAG i macFas5.chr3 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=34172.000000 s hg38.chr7_KI270899v1_alt 165085 56 + 190869 --GGGG-----AGAGGGCCCAGGTCAGCCCAGTGCGGGGGGAGAGGGCCCAGGTCAGCCCAGT s panTro5.chr7_NW_015973580v1_random 40716 56 - 83720 --AGGG-----AGAGGGCCCAGGTCAGCCCAGTGCGGAGGGAGAGGGCCCAGGTCAGCCCAGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555585 56 + 162613886 --AGGG-----AGAGGGCCCAGGTCAGGCCAGTCCGGAGGGAGAGGGCCCAGGTCAGCCCAGT i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 186610 56 + 85365473 --AGGG-----AGAGGACCCAGGTCAGCCCAGTCCAGAGGGAGAGGACCCAGGTCAGCCCAAT i nomLeu3.chr20 C 0 T 143 s macFas5.chr3 33649330 58 + 192294377 CTGGGGCTCCCGGAGGA--CGGGTCAGAGGAGCT---GGGGAGAGGGCCCAGGTCGGCCACGT i macFas5.chr3 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I e gorGor5.CYUI01015914v1 127137 82 - 432965 T a score=1107.000000 s hg38.chr7_KI270899v1_alt 165141 4 + 190869 GCGG s panTro5.chr7_NW_015973580v1_random 40772 4 - 83720 GCGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555641 4 + 162613886 CCGG i panPan2.chr7 C 0 C 0 s macFas5.chr3 33649388 4 + 192294377 CCAG i macFas5.chr3 C 0 I 32 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I e nomLeu3.chr20 186666 143 + 85365473 T e gorGor5.CYUI01015914v1 127137 82 - 432965 T a score=1267.000000 s hg38.chr7_KI270899v1_alt 165145 3 + 190869 GGG s panTro5.chr7_NW_015973580v1_random 40776 3 - 83720 AGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555645 3 + 162613886 AGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127055 3 - 432965 GGG i gorGor5.CYUI01015914v1 T 82 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I e nomLeu3.chr20 186666 143 + 85365473 T a score=36858.000000 s hg38.chr7_KI270899v1_alt 165148 43 + 190869 GAGAGGGCCCAGGTCAGCCCAGTCCGGGGGGAGAGGGCCCAGG s panTro5.chr7_NW_015973580v1_random 40779 43 - 83720 GAGAGGGCCCAGGTCAGCCCAGTCCGGAGGGAGAGGGCCCAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555648 43 + 162613886 GAGAGGGCCCAGGTCAGCCCAGTCCGGAGGGAGAGGGCCCAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127058 41 - 432965 GAGAGGGCCCAGGTCAGCCCAGTCCGGAGG--GAGGGCCCAGG i gorGor5.CYUI01015914v1 C 0 I 24 s nomLeu3.chr20 186523 43 + 85365473 gggaaGGCCCAGGTCAGCCCAGTCCAGAGGGAGAGGACCCAGG i nomLeu3.chr20 T 143 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=9640.000000 s hg38.chr7_KI270899v1_alt 165191 10 + 190869 TCAGCCCAGT s panTro5.chr7_NW_015973580v1_random 40822 10 - 83720 TCAGCCCAGT i panTro5.chr7_NW_015973580v1_random C 0 T 150 s panPan2.chr7 555691 10 + 162613886 TCAGCCCAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127123 10 - 432965 TCAGCCCAGT i gorGor5.CYUI01015914v1 I 24 C 0 s nomLeu3.chr20 186566 10 + 85365473 TCAGCCCAGT i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=4548.000000 s hg38.chr7_KI270899v1_alt 165201 7 + 190869 GCGGGGG s panTro5.chr7_NW_015973580v1_random 40682 7 - 83720 CCGGAGG i panTro5.chr7_NW_015973580v1_random T 150 C 0 s panPan2.chr7 555701 7 + 162613886 GCGGAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127133 7 - 432965 CCGGAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186576 7 + 85365473 CCAGAGG i nomLeu3.chr20 C 0 T 60 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=5770.000000 s hg38.chr7_KI270899v1_alt 165208 11 + 190869 GAGAGGGCCCA s panTro5.chr7_NW_015973580v1_random 40689 11 - 83720 GAGAGGGCCCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555708 11 + 162613886 GAGAGGGCCCA i panPan2.chr7 C 0 T 224 s gorGor5.CYUI01015914v1 127140 9 - 432965 GAGGGGGCA-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186523 11 + 85365473 gggaaGGCCCA i nomLeu3.chr20 T 60 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=2465.000000 s hg38.chr7_KI270899v1_alt 165219 16 + 190869 GGTCAGCCCAGTGCGG s panTro5.chr7_NW_015973580v1_random 40700 16 - 83720 GGTCAGCCCAGTGCGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 127149 12 - 432965 GGT--GCCCGTCGG-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186534 16 + 85365473 GGTCAGCCCAGTCCAG i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I e panPan2.chr7 555719 224 + 162613886 T a score=2187.000000 s hg38.chr7_KI270899v1_alt 165235 3 + 190869 GGG s panTro5.chr7_NW_015973580v1_random 40716 3 - 83720 AGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555495 3 + 162613886 GGG i panPan2.chr7 T 224 C 0 s gorGor5.CYUI01015914v1 127161 3 - 432965 AGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186550 3 + 85365473 AGG i nomLeu3.chr20 C 0 T 30 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=21727.000000 s hg38.chr7_KI270899v1_alt 165238 27 + 190869 GAGAGGGCCCAGGTCAGCCCAGTGCGG s panTro5.chr7_NW_015973580v1_random 40719 27 - 83720 GAGAGGGCCCAGGTCAGCCCAGTGCGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555498 27 + 162613886 GAGACGGCCCAGGTCAGCCCAGTTCAG i panPan2.chr7 C 0 T 30 s gorGor5.CYUI01015914v1 127164 27 - 432965 GAGGGGGCCCAGGTCAGCCCAGTCCGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186523 27 + 85365473 gggaaGGCCCAGGTCAGCCCAGTCCAG i nomLeu3.chr20 T 30 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=2187.000000 s hg38.chr7_KI270899v1_alt 165265 3 + 190869 GGG s panTro5.chr7_NW_015973580v1_random 40746 3 - 83720 AGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555495 3 + 162613886 GGG i panPan2.chr7 T 30 C 0 s gorGor5.CYUI01015914v1 127191 3 - 432965 AGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186550 3 + 85365473 AGG i nomLeu3.chr20 C 0 T 30 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=14292.000000 s hg38.chr7_KI270899v1_alt 165268 17 + 190869 GAGAGGGCCCAGGTCAG s panTro5.chr7_NW_015973580v1_random 40749 17 - 83720 GAGAGGGCCCAGGTCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555498 17 + 162613886 GAGACGGCCCAGGTCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127194 17 - 432965 GAGGGGGCCCAGGTCAG i gorGor5.CYUI01015914v1 C 0 T 112 s nomLeu3.chr20 186523 17 + 85365473 gggaaGGCCCAGGTCAG i nomLeu3.chr20 T 30 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=9857.000000 s hg38.chr7_KI270899v1_alt 165285 13 + 190869 CCCAGTGCGGGGG s panTro5.chr7_NW_015973580v1_random 40766 13 - 83720 CCCAGTGCGGAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555515 13 + 162613886 CCCAGTTCAGAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127099 13 - 432965 CCCAGTCCGGAGG i gorGor5.CYUI01015914v1 T 112 C 0 s nomLeu3.chr20 186540 13 + 85365473 CCCAGTCCAGAGG i nomLeu3.chr20 C 0 T 30 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=38572.000000 s hg38.chr7_KI270899v1_alt 165298 53 + 190869 GAGAGGGCCCAGGTCAGCCCAGTCCGGGGGGAGAGGGCCCAGGTCAGCCCAGT s panTro5.chr7_NW_015973580v1_random 40779 53 - 83720 GAGAGGGCCCAGGTCAGCCCAGTCCGGAGGGAGAGGGCCCAGGTCAGCCCAGT i panTro5.chr7_NW_015973580v1_random C 0 T 150 s panPan2.chr7 555528 53 + 162613886 GAGAGGGCCCAGGTCAGCCCAGTCCGGAGGGAGAGGGCCCAGGTCAGCCCAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127112 46 - 432965 --GGGGGCCCAGGTCAGCCCAGTCCGGAGGGAGGGGG--CAGGT--GCCCGT- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186523 53 + 85365473 gggaaGGCCCAGGTCAGCCCAGTCCAGAGGGAGAGGACCCAGGTCAGCCCAGT i nomLeu3.chr20 T 30 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=5713.000000 s hg38.chr7_KI270899v1_alt 165351 9 + 190869 CCGGGGGGA s panTro5.chr7_NW_015973580v1_random 40682 9 - 83720 CCGGAGGGA i panTro5.chr7_NW_015973580v1_random T 150 C 0 s panPan2.chr7 555581 9 + 162613886 GCGGAGGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127158 8 - 432965 -CGGAGGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186576 9 + 85365473 CCAGAGGCA i nomLeu3.chr20 C 0 T 60 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=23022.000000 s hg38.chr7_KI270899v1_alt 165360 28 + 190869 GAGGGCCCAGGTCAGCCCAGTCCGGGGA s panTro5.chr7_NW_015973580v1_random 40691 28 - 83720 GAGGGCCCAGGTCAGCCCAGTGCGGAGG i panTro5.chr7_NW_015973580v1_random C 0 I 119 s panPan2.chr7 555590 28 + 162613886 GAGGGCCCAGGTCAGGCCAGTCCGGAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127166 28 - 432965 GGGGGCCCAGGTCAGCCCAGTCCGGAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186525 28 + 85365473 gaaGGCCCAGGTCAGCCCAGTCCAGAGG i nomLeu3.chr20 T 60 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=73732.000000 s hg38.chr7_KI270899v1_alt 165388 83 + 190869 GAGAGGGCCCAGGTCAGCCCAGTCCGGGGGGAGAGGGCCCAGGTCAGCCCAGTGCGGAGGGAGAGGGCCCAGGTCAGCCCAGT s panTro5.chr7_NW_015973580v1_random 40838 83 - 83720 GAGAGGGCCCAGGTCAGCCCAGTCCGGAGGGAGAGGGCCCAGGTCAGCCCAGTGCGGAGGGAGAGGGCCCAGGTCAGGCCAGT i panTro5.chr7_NW_015973580v1_random I 119 C 0 s panPan2.chr7 555618 83 + 162613886 GAGAGGGCCCAGGTCAGCCCAGTCCGGAGGGAGAGGGCCCAGGTCAGCCCAGTCCGGAGGGAGAGGGCCCAGGTCAGCCCAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127194 83 - 432965 GAGGGGGCCCAGGTCAGCCCAGTCCGGAGGGAGGGGGCCCAGGTCAGCCCAGTCCGGAGGGAGGGGGCCCAGGTCAGCCCAGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186553 83 + 85365473 GAGAGGACCCAGGTCAGCCCAGTCCAGAGGCAGAGGGCCCAGGTCAGCCCAGTCCAGAGGGAGAGGACCCAGGTCAGCCCAGT i nomLeu3.chr20 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e saiBol1.JH378296 376920 0 - 2409723 C e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=2918.000000 s hg38.chr7_KI270899v1_alt 165471 4 + 190869 GCGG s panTro5.chr7_NW_015973580v1_random 40921 4 - 83720 CCGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555701 4 + 162613886 GCGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127277 4 - 432965 CCGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186636 4 + 85365473 CCAG i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378296 376920 4 - 2409723 GCAG i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e macNem1.NW_012019910v1 4416851 163 - 9440265 I e macFas5.chr3 33649392 32 + 192294377 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=1694.000000 s hg38.chr7_KI270899v1_alt 165475 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 40925 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555705 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127281 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186640 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33649424 1 + 192294377 G i macFas5.chr3 I 32 C 0 s macNem1.NW_012019910v1 4417014 1 - 9440265 A i macNem1.NW_012019910v1 I 163 C 0 s saiBol1.JH378296 376924 1 - 2409723 A i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 331785 0 + 6586416 C e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e chlSab2.chr28 139544 41 - 21531802 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e rheMac8.chr3 34033311 164 + 185818997 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=23182.000000 s hg38.chr7_KI270899v1_alt 165476 6 + 190869 GGGAGA s panTro5.chr7_NW_015973580v1_random 40926 6 - 83720 GGGAGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555706 6 + 162613886 GGGAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127282 6 - 432965 GGGAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186641 6 + 85365473 GGGAGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033475 6 + 185818997 GGGAGA i rheMac8.chr3 I 164 C 0 s macFas5.chr3 33649425 6 + 192294377 GGGAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417015 6 - 9440265 GGGAGA i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 139585 6 - 21531802 GGGGGA i chlSab2.chr28 I 41 C 0 s colAng1.NW_012117710v1 331785 6 + 6586416 GGGAGA i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 376925 4 - 2409723 GGGA-- i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e cebCap1.NW_016107703v1 538255 5 - 2125214 I e calJac3.chrUn_GL286444 62374 1 + 138751 I a score=79059.000000 s hg38.chr7_KI270899v1_alt 165482 13 + 190869 GGGCCCAGGTCAG s panTro5.chr7_NW_015973580v1_random 40932 13 - 83720 GGGCCCAGGTCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555712 13 + 162613886 GGGCCCAGGCCAG i panPan2.chr7 C 0 T 6 s gorGor5.CYUI01015914v1 127288 13 - 432965 GGGCCCAGGTCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186647 13 + 85365473 GGACCCAGGTCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033481 13 + 185818997 GGGCCCAGGTCGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649431 13 + 192294377 GGGCCCAGGTCGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417021 13 - 9440265 GGGCCCAGGTCGG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 139591 13 - 21531802 GGGCCTAGGTTGG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 331791 13 + 6586416 GGGCCCAGGCCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62375 13 + 138751 GGGCTCAGGTCAG i calJac3.chrUn_GL286444 I 1 I 1 s saiBol1.JH378296 376929 10 - 2409723 ---CTCAGGTCAG i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 538260 13 - 2125214 GGGCTCAGGTCAG i cebCap1.NW_016107703v1 I 5 I 1 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=182022.000000 s hg38.chr7_KI270899v1_alt 165495 42 + 190869 CCCAGTCCAGCTGAGGCTCTCGGAGGACAGGACCCGCCCCGC s panTro5.chr7_NW_015973580v1_random 40945 42 - 83720 GCCAGTCCAGCTGGGGCTCTCGGAGGACGGGACCCGCCCCGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 127301 41 - 432965 CCCAGTCCAGCTGGGGATCTCGGAGGACGGGACCCGCCCCG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186660 42 + 85365473 CCCAATTCAGCTGGGGCTCTCGGAGGACGGGACCCGCCCCGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033494 42 + 185818997 CCGCGTCCAGCTGGGGCTCTCGGAGGACAGGGGCCGCCCCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649444 42 + 192294377 CCACGTCCAGCTGGGGCTCTCGGAGGACAGGGGCCGCCCCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417034 42 - 9440265 CCACGTCCAGCTGGGGCTCTCGGAGGACAGGGGCCGCCCCAG i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 139604 42 - 21531802 CCACGTCCAGCTGGGGCTCCCGGAGGATGGGGGCCGCCCCAG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 331804 42 + 6586416 CCCCGTCCAACTGGGGCTCTCGGAGGACGGGGGCTGCCCCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62389 41 + 138751 CCCAGTCCAGCTG-GGCTCTCAGAGGATGGGGGCTGCCCGAC i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 376940 41 - 2409723 CCCAGTCCAGCTG-GGCTCTCAGAGGACACGGGCTGCCCCAC i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 538274 41 - 2125214 CCCAGTCCAGCTG-GGCTCTCGGAGGATGGGGGCTGCCCTAC i cebCap1.NW_016107703v1 I 1 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e cerAty1.NW_012002954v1 17005186 247 - 21915920 I e aotNan1.NW_018514293v1 119481 1131 + 376347 I e panPan2.chr7 555725 6 + 162613886 T a score=664269.000000 s hg38.chr7_KI270899v1_alt 165537 103 + 190869 GCTGCCAGTGCCGAAGCTTGGGTTCTCTGAGGACTGCGAGGGGGTCTCAGCACTGTGTCCACAGATGGGGCAGGGACCT-CCG--CAGGGAACCTTCTCTCGGCTG s panTro5.chr7_NW_015973580v1_random 40987 103 - 83720 GCTGCCAGTGCCGAAGCTTGGGTTCTCTGAAGACCGTGAGGGGGTCTCAGCACCGTGTCCACAGATGGGGCAGGGACCT-CCG--CAGGGAACCTTCTCTCGGCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 127342 103 - 432965 GCTGCCAGTGCCGAAGCTTGGGTTCTCTGAGGACTGTGAGGGGGTCTCAGCACCGTGTCCACAGATGGGGCAGGGACCT-CCG--CAGGGAACCTTCTCTCGGCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186702 102 + 85365473 GCTGCCAGTGCCGAAGCTTGGGTTCTCTGAGGACTGTGAGGGGGTCTCA-CACCGTGACCACAGATGGGGCAGGGACCT-CCC--CAGGGAACCTTCTCTCAGCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033536 103 + 185818997 GCTGCCAGTGCTGAAGTTTGGGTTCTCTGAGGACTGTAAGGGGGTCTCAGAGCCGTGTCCACAGATGGGGCAGGGACCT-CCC--CAGGGAACCTTCTCTCTGCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649486 103 + 192294377 GCTGCCAGTGCTGAAGTTTGGGTTCTCTGAGGACTGTAAGGGGGTCTCAGAGCCATGTCCACAGATGGGGCAGGGACCT-CCC--CAGGGAACCTTCTCTCGGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417076 103 - 9440265 GCTGCCAGTGCTGAAGTTTGGGTTCTCTGAGGACTGTAAGGGGGTCTCAGAGCCATGTCCACAGATGGGGCAGGGACCT-CCC--CAGGGAACCTTCTCTCGGCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005433 104 - 21915920 GCTGCCAGTGCTGAAGTTTGGGTTCTCTGAGGACTGTAAGGGGGTCTCAGAGCCGTGTCCACAGATGGGGCAGGGACCTCCCC--CAGGGAACCTTCTCTCGGCTG i cerAty1.NW_012002954v1 I 247 C 0 s chlSab2.chr28 139646 103 - 21531802 GCTGCCAGTGCTGAAGTTTGGGTTCTCTGAGGACTGTGAGGGGGTCTCGGAGCCGTGTCCACAGATGGGGCAGGGACCT-CCC--CAGGGAACCTTCTCTCGGCTG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 331846 103 + 6586416 GCTGCCAGTGCTGAAGTTTGGGTTCTCTGAGGACTGTGAGGGGGTCTCAGCACCATGTCCACAGATGGGGCAGGGACCT-CCC--CAGGGAACCTTCTCTCGGCGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62430 103 + 138751 ACTGCTGGTGCTGAAGGTTGGACTCTCTGAGGACTGTGAGGGGGTCTCAGTGCTGTGTCCACAGATGGGGTAGGGACCT-CCC--CAGGGAACCTTCTCTCAGCTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 376981 103 - 2409723 ACTGCCAGTGCTGAAGGTTGGACTCTCTGAGGACTGAGAGGGGGTCCCAGTGTTGTGTCCACAGATGGGGCAGGGACCC-CCC--CAGGGAACCTTCTCTCGGCTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538315 105 - 2125214 ACTGCCAGTGCTGAAGGTTGGACTCTCTGAGGACTGTGAGGGGGTCTCAGTGCTGTGTCCTCAGATGGGGCAAGGACCC-CCCCACAGGGAACCTTCTCTCAGCTG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e aotNan1.NW_018514293v1 119481 1131 + 376347 I e panPan2.chr7 555725 6 + 162613886 T a score=944341.000000 s hg38.chr7_KI270899v1_alt 165640 146 + 190869 GGCCAGCCCACCCCAGGGGCTGTAGACGAGGGAGTTAATGAAC-----------ACGGGATGGGTTGAGCCGCCTGGTTTGCCCACAGAGGGGCGAGGAAGGGAGT-GGGGAGTCTGCTGTGAGCGGAGAGAGGACAGCCTGAGGCCTCAGGAACGCT s panTro5.chr7_NW_015973580v1_random 41090 146 - 83720 GGCCAGCCCACCCCAGGGGCTGTAGACGAGGGAGTTAATGAAC-----------ACGGGATGAGTTGAGCCGCCTGGTTTGCCCACAGAGGGGCGAGGAAGGGAGC-GGGGAGTCTGCCGTGAGCGGAGAGAGGACGGCCTGAGGCCTCAGGAACGCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555719 146 + 162613886 GGCCAGGCCACCCCAGGGGCTGTAGACGAGGGAGTTAATGAAC-----------ACGGGATGAGTTGAGCCGCCTGGTTTGCCCACAGAGGGGCGAGGAAGGGAGC-GGGGAGTCTGCCGTGAGCGGAGAGAGGACGGCCTGAGGCCTCAGGAACGCT i panPan2.chr7 T 6 C 0 s gorGor5.CYUI01015914v1 127445 145 - 432965 GGCCAGCCCACCCCAGGGGCTGTAGACGAGGGAGTTAATGAAC-----------ACGAGATGGGTTGAGCTGCCTGGTTTGCCCACAGAGGGGCAAGGAAGGGAGT-GGGGAGTCTGC-GTGAGCGGAGAGAGGACAGCCTGAGGCCTCAGGAATGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186804 146 + 85365473 GGGCAGCCCACCCCAGGGGCTGTGGACGAGGGAGTTAATGAAC-----------ACGGGCTGAGTAGAGCCGCCTGGTTTGCCCACAGAGGGGCGAGGAAGGGAGT-GGGGAGTCTGCTGTGAGCGGAGAGAGGACAGCCTGAGGCCTCAGGAACGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033639 155 + 185818997 GGCCAGCCCACCCCAGGGGCCGTAGACCAGGGAGTTAAAGAACAGAGTTAATGGACAGGATGAGCAGAGCCGCCTGGTTTGCCCGCAATGGGGTGAGGAAGGGAGT-GGGGGGTCTGCCGTGAGTG--GAGAGGACAGCCTGAGGCCTCAGGAATGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649589 155 + 192294377 GGCCAGCCCACCCCAGGGGCCGTAGACCAGGGAGTTAAAGAACAGAGTTAATGGACAGGATGAGCAGAGCCGCCTGGTTTGCCCGCAATGGGGTGAGGAAGGGAGT-GGGGGGTCTGCCGTGAGTG--GAGAGGACAGCCTGAGGCCTCAGGAATGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417179 155 - 9440265 GGCCAGCCCACCCCAGGGGCCGTAGACCAGGGAGTTAAAGAACAGAGTTAATGGACAGGATGAGCAGAGCCGCCTGGTTTGCCCGCAATGGGGTGAGGAAGGGAGT-GGGGGGTCTGCCGTGAGTG--GAGAGGACAGCCTGAGGCCTCAGGAATGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005537 155 - 21915920 GGCCAGCCCACCCCAGGGGCCGTAGACCAGGGAGTTAAAGAACAGAGTTAATGGACAGGATGAGCAGAGCCGCCTGGTTTGCCCGCAACGGGGTGACGAAGGGAGT-GGGGGGTCTGCCGTGAGTG--GAGAGGACAGCCTGAGGCCTCAGGAATGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 139749 158 - 21531802 GGCCAGCCCACACCAGGGGCCGTAGACGAGGGAGTTAATGGACAGAGTTAATGGACAGGACGAGCAGAGCCGCCTGGTTTGCCCGCAGCGGGGTGAGGAAGGGAGTGGGGGGGTCTCCCATGAGTGGAGAGAGGACAGCCCGAGGCCTCAGGAATGCT i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 331949 144 + 6586416 GGCCAGCCCACCCCAGGGGCCGTAGACGAGGGAGTTAATGGAC-----------ACAGGATGAGCAGAGCCGCCTGGTTCGCCCGCAGCGGGGTGAGGAAGGGAGT---GGGGTCCGCCGTGAGTGGAGAGAGGACAGCCTGAGGCCTCAGGAATGCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62533 139 + 138751 GGCCAG-----CCCAGGGGCTGTAGATGAGGGAGTTAATGAAC-----------GGAGGATAAGCAGAGCCACCTGGGTTGCCTGCAGT-AGGTGAGGCAGGGAGT--AGGGGTCTGTAGTGAGCAGAGGGAGGACAACCTGGGGCCTCAGGAATGct i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377084 144 - 2409723 GGCCAGCCCACCCCAGGGGCTGTAGATGAGGGAGTTAATGAAC-----------GGAGGATGAGCAGAGCCACCTGGGTTGTCTGCAGT-GGGTGAGGCGGGGAGT--GGGGGTCTGCAGCGAGCGGAGGCAGGGCAACCTGGGGCCTCAGGAACGCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538420 144 - 2125214 GGCCAGCCCACCCCAGGAGCTGTAGATGAGGGAGCTAATGAAT-----------GGAGGATGAGCAGAGCCACCTGGGTTGCCTGTAGT-AGGTGAGGCGGGGAGT--GGGGGTCTGCAGCGAGCAGAGGGAGGGCAACCTGGGGCCTCAGGAAAGCT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2269763 275 - 8137123 I e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=568791.000000 s hg38.chr7_KI270899v1_alt 165786 85 + 190869 GGCTGCCTG----CC-TGCAGCGGGAGCTAAC--GGG---GCGTCTGTCGGGAAGGGGCACGGCCACAGGATTT----AGGGGCAGTTTGGACACACTG s panTro5.chr7_NW_015973580v1_random 41236 85 - 83720 GGCTGGCTG----CC-TGCAGCAGGAGCTAAC--GGG---GCGTCTGTCGGGAAGGGGCACGGCCACAGGATTT----AGGGGCAGTTTGGACACACTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555865 85 + 162613886 GGCTGGCTG----CC-TGCAGCGGGAGCTAAC--GGG---GCGTCTGTCGGGAAGGGGCACGGCCACAGGATTT----AGGGGCAGTTTGGACACACTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127590 85 - 432965 GGCTGCCTG----CC-TGCAGCGGGCGCTAAC--GGG---GCGTCTGTCGGGAAGGGGCACGGCCACAGGATTT----AGGGGCAGTTTGGACACACTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 186950 85 + 85365473 GGCTGCCTG----CC-TGCAGCTGGAGCTAAC--GGG---GCGTCTGTCGGGAAGGGGCATGGCCATGGGATTT----AGGGGCAGTTTGGACACACTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033794 85 + 185818997 GGCTGCCTG----CC-TGCAGTGGGAGCTAAC--TGG---GGGTCTGTCGGGAAGGGGCCTGGCCGCGGGATTT----AGGGGCAGTTTGGACACATTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649744 85 + 192294377 GGCTGCCTG----CC-TGCAGTGGGAGCTAAC--TGG---GGGTCTGTCGGGAAGGGGCCTGGCCGCGGGATTT----AGGGGCAGTTTGGACACACTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417334 85 - 9440265 GGCTGCCTG----CC-TGCAGTGGGAGCTAAC--TGG---GGGTCTGTCGGGAAGGGGCCTGGCCGCGGGATTT----AGGGGCAGTTTGGACACACTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005692 85 - 21915920 GGCTGCCTG----CC-TGCAGTGGGAGCTAAC--TGG---GGGTCTGTCGGGAAGGGGCCTGGCCGCGGGATTT----AGGGGCAGTTTGGACACACTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 139907 81 - 21531802 GG----CTG----CC-TGCAGTGGGGGCTAAC--TGG---GGGTCTGTCGGGAAGGGGCCTGGCCGCGGGATTT----AGGGGCAGTTTGGACACACTG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 332093 84 + 6586416 GGCTGCCTG----CC-TGCAGTGGGAGCTAAG--TGG---GGGTCTGTCGGGAAGGGGCCTGGCCAT-GGATTT----AGGGGCAGTTTGGACACACTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62672 91 + 138751 gcctgcctgcctgcc-tgcTGCAGGAGCTAACTGTGG---GTGTCTGTTGGAAACAGGCATGGCCGCAGGATTT----ATGGACCATTTAGACATACCG i calJac3.chrUn_GL286444 C 0 I 4 s saiBol1.JH378296 377228 86 - 2409723 GCCTGCCTG-----C-TGCCGCAGGAGCTAACTGTGG---GCGTCTGTCAGAAACAGGCATGGCGGCAGGATTT----AGGGACCATTTAGGCATACTG i saiBol1.JH378296 C 0 I 4 s cebCap1.NW_016107703v1 538564 87 - 2125214 GACTGCCTG----CC-TGCTACAGGAGCTAACTGTGG---GTGTCTGTCGGAAACAGGCATGGCCACAGGATTT----AGGGACCATTTAGGCATACTG i cebCap1.NW_016107703v1 C 0 I 4 s otoGar3.GL873611 2270038 93 - 8137123 GGCTCCCTG----CCATGCAGAGGGAGAGGGC--AGGCTAACGTTCTCCTAAAAGGTAAATGGCATCAGGGTTCCAGAAAGGACTGCTGGGATATATTG i otoGar3.GL873611 I 275 I 4 e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M e aotNan1.NW_018514293v1 119481 1131 + 376347 I a score=87981.000000 s hg38.chr7_KI270899v1_alt 165871 12 + 190869 GTCCGGTGAGCT s panTro5.chr7_NW_015973580v1_random 41321 12 - 83720 GTCCGGTGAGCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555950 12 + 162613886 GTCCGGTGAGCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127675 12 - 432965 GTCCGGTGAGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187035 12 + 85365473 GTCCGATGAGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033879 12 + 185818997 GTCCGGTGACCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649829 12 + 192294377 GTCTGGTGACCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417419 12 - 9440265 GTCTGGTGACCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005777 12 - 21915920 GTCCGGTGACCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 139988 12 - 21531802 GTCCCGTGACCT i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 332177 12 + 6586416 GTCCGGTGACCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62767 12 + 138751 GTCCAGTGAGCT i calJac3.chrUn_GL286444 I 4 C 0 s saiBol1.JH378296 377318 12 - 2409723 GTCCAGTGAGCT i saiBol1.JH378296 I 4 C 0 s cebCap1.NW_016107703v1 538655 12 - 2125214 GTCTAGTGAGCT i cebCap1.NW_016107703v1 I 4 C 0 s aotNan1.NW_018514293v1 120612 12 + 376347 GTCCAGTGAGCC i aotNan1.NW_018514293v1 I 1131 C 0 s otoGar3.GL873611 2270135 12 - 8137123 GCCTGCTGAGGC i otoGar3.GL873611 I 4 C 0 e canFam3.chr6 61055783 317 - 77573801 I e manLeu1.NW_012101810v1 173716 660 - 2515279 M a score=160024.000000 s hg38.chr7_KI270899v1_alt 165883 14 + 190869 TGATTTCAGATTCC s panTro5.chr7_NW_015973580v1_random 41333 14 - 83720 TGATTTCAGATTCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555962 14 + 162613886 TGATTTCAGATTCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127687 14 - 432965 TGATTTCAGATTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187047 14 + 85365473 TGATTTCAGATTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033891 14 + 185818997 TGATTTCAGATTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649841 14 + 192294377 TGATTTCAGATTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417431 14 - 9440265 TGATTTCAGATTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17005789 14 - 21915920 TGATTTCAGATTCC i cerAty1.NW_012002954v1 C 0 I 2108 s chlSab2.chr28 140000 14 - 21531802 TGATTTCAGATTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 174385 14 - 2515279 TGATTTCAGATTCC i manLeu1.NW_012101810v1 M 660 C 0 s colAng1.NW_012117710v1 332189 14 + 6586416 TGATTTCGGATTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62779 14 + 138751 TGATTTCAGATTCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377330 14 - 2409723 TGATTGCAGATTCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538667 14 - 2125214 TGATTTCAGATTCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120624 14 + 376347 TGATTTCAGATTCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270147 14 - 8137123 TGCTTGCAGGTTTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I a score=276699.000000 s hg38.chr7_KI270899v1_alt 165897 31 + 190869 GGGATCTGGTTTCGGAGTGGAGTTGTGGACT s panTro5.chr7_NW_015973580v1_random 41347 31 - 83720 GGGATCTGGTTTCGGAGTGGAGCTGTGGACT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 555976 31 + 162613886 GGGATCTGGTTTCGGAGTGGAGCTGTGGACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127701 31 - 432965 GGGATATGGTTTCGGAGTGGAGCTGTGGACT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187061 31 + 85365473 GGGTTCTGGTTTCCGAGTGGAGCTGTGGACT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033905 31 + 185818997 AGATGCTGGTTTCTGAGTGGAGCTGTGGACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649855 31 + 192294377 AGATGCTGGTTTCTGAGTGGAGCTGTGGACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417445 31 - 9440265 AGATGTTGGTTTCTGAGTGGAGCTGTGGACT i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 140014 31 - 21531802 GGATGCTGGTTTCTGAGTGGAGCTGTGGACT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 174399 31 - 2515279 AGATGCTGGTTTCTGAGTGGAGCTGTGGACT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 332203 31 + 6586416 GGATGCTGGTGTCTGAGTGGAGCTGTGGACT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62793 31 + 138751 GAGTTCTGGTTTCTGAGTGGAGCTGTGGACT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377344 31 - 2409723 GGGTTCTGGTTTCTGAGTGGAGCTACGGACT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538681 31 - 2125214 GGGTTCTGGTTTCTGAGTGGAGCTGTGGACT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120638 31 + 376347 AGGTTCTGGTTTCTGAGTGGAGCTGTGGACT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270161 31 - 8137123 AGATTCAGGTTTCTGGGTGGAGATGAGGCCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I e cerAty1.NW_012002954v1 17005803 2108 - 21915920 I a score=348275.000000 s hg38.chr7_KI270899v1_alt 165928 40 + 190869 CTCCAGGACCCATCGCTGAGGAGCAGGAGGTTCTCCAGGG s panTro5.chr7_NW_015973580v1_random 41378 40 - 83720 CTCCAGGACCCATCGCTGAGGAGCAGGAGGTTCTCCAGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556007 40 + 162613886 CTCCAGGACCCATCGCTGAGGAGCAGGAGGTTCTCCAGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127732 40 - 432965 CTCCAGGACCCATCGCTGAGGAGCAGGAGGTTCTCCAGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187092 37 + 85365473 CTCCAGGACCCATCACTGAGGAGCAGCAGGTTCTCCA--- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34033936 40 + 185818997 CTCCAGGACCCATCACTGAGGAGCAGCAGCATCTCCAGAG i rheMac8.chr3 C 0 I 51 s macFas5.chr3 33649886 40 + 192294377 CTCCAGGATCCATCACTGAGGAGCAGCAGCATCTCCAGGG i macFas5.chr3 C 0 I 51 s macNem1.NW_012019910v1 4417476 40 - 9440265 CTCCAGGATCCATCACTGAGGAGCAGCAGCATCTCCAGGG i macNem1.NW_012019910v1 C 0 I 51 s cerAty1.NW_012002954v1 17007911 40 - 21915920 CTCCAGGACCCATCACTGAGGAGCAGCAGCATCTCCAGGG i cerAty1.NW_012002954v1 I 2108 I 56 s chlSab2.chr28 140045 40 - 21531802 CTCCAGGACCCATCACTGAGGAGCAGCAGCGTCTCCAGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 174430 40 - 2515279 CTCCAGGACCCATCACTGAGGAGCAGCAGCATCTCCAGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 332234 40 + 6586416 CTCCAGGACCCATCACTGAGGAGCAGGAGCATCTCCAGGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62824 40 + 138751 CTGCAGGACCCATGGCTGAGGAGCAGCAGCGTCCCCAGGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377375 40 - 2409723 CTGCAGGACCCATGGCTGAGGAGCGGCAGCATCTCCAGGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538712 40 - 2125214 CTGCAGGACCCGTGGCTGAGGAGCAGCAGCATCTCCAGGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120669 40 + 376347 CTGCGGGACCCGTGGCTGAGGAGCAGCAGCATCTCCAGGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270192 2 - 8137123 ---------------CT----------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61055783 317 - 77573801 I a score=23199.000000 s hg38.chr7_KI270899v1_alt 165968 5 + 190869 GCCAT s panTro5.chr7_NW_015973580v1_random 41418 5 - 83720 GCCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556047 5 + 162613886 GCCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127772 5 - 432965 GCTCT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34034027 5 + 185818997 ACCAT i rheMac8.chr3 I 51 C 0 s macFas5.chr3 33649977 5 + 192294377 ACCGT i macFas5.chr3 I 51 C 0 s macNem1.NW_012019910v1 4417567 5 - 9440265 ACCGT i macNem1.NW_012019910v1 I 51 C 0 s chlSab2.chr28 140085 5 - 21531802 GCCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 174470 5 - 2515279 TCCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 332274 5 + 6586416 GTCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62864 5 + 138751 GCCCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377415 5 - 2409723 GCCCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538752 5 - 2125214 TCCCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120709 5 + 376347 GCCCT i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2270194 0 - 8137123 C e canFam3.chr6 61055783 317 - 77573801 I e cerAty1.NW_012002954v1 17007951 56 - 21915920 I e nomLeu3.chr20 187129 0 + 85365473 C a score=494594.000000 s hg38.chr7_KI270899v1_alt 165973 56 + 190869 GGGGCCCGGGGCTCTGAGGGAGGCTCTGCACTCCCAGCATGAG--GTCACCAC------------------------------------------------AGGGC s panTro5.chr7_NW_015973580v1_random 41423 56 - 83720 GGGGCCCGGGGCTCTGAGGGAGGCTCTGCACTCCCAGCACGAG--GTCACCAC------------------------------------------------GGGGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556052 56 + 162613886 GGGGCCCGGGGCTCTGAGGGAGGCTCTGCACTCCCAGCACGAG--GTCACCAC------------------------------------------------GGGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127777 56 - 432965 GGGGCCCGGGGCTCTGAGGGAGGCTCTGCACTCCCAGCACGAG--GTCACCAC------------------------------------------------GGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187129 49 + 85365473 -------GGGGCTCTGAGGGAGGCTCTGTACTCCCAGCCCAAG--GTCACCAC------------------------------------------------GGGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034032 56 + 185818997 GGGGCCCGGGGCTCTGAGGGAGGCTCCACAGTCCCGGCATGAG--GTCACCAC------------------------------------------------GGGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33649982 56 + 192294377 GGGGTCCGGGGCTCTGAGGGAGGCTCCACAGTCCCGGCATGAG--GTCACCGC------------------------------------------------GGGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417572 56 - 9440265 GGGGTCCGGGGCTCTGAGGGAGGCTCCACAGTCCCGGCATGAG--GTCACCGC------------------------------------------------GGGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008007 56 - 21915920 GGGGCCCGGAGCTCTGAGGGAGGCTCCACAGTCCCGGCATGAG--GTCACCGC------------------------------------------------GGGGC i cerAty1.NW_012002954v1 I 56 C 0 s chlSab2.chr28 140090 55 - 21531802 -GGGCCCGGGGCTCTGAGGGAGGCTCCGCGGTCCCAGCACGAG--GTCACCGC------------------------------------------------GGGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 174475 56 - 2515279 GGGGCCCGGGGCTCTGAGGGAGGCTCCAAAGTCCCAGCACGAG--GTCACCGC------------------------------------------------GGGGC i manLeu1.NW_012101810v1 C 0 I 51 s colAng1.NW_012117710v1 332279 104 + 6586416 GGGGCCCGGGGCTCTGAGGGAGGCTCCGCAGTCCCGGCACGAG--GTCGCCGCGGCCGGGGCTCTGAGGGAGGCTCCGCAGTCCTGGCACGAGGTCGTCGTGGGGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62869 49 + 138751 GGGGTC-------CTGAGGGAGACTCTGTACTCCCAGCACATG--GTCACTAT------------------------------------------------AGGGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377420 55 - 2409723 GGGGCCTGGGGTTCTGAGGGAG-CTCTGTACTTCCAGCACATG--GTCACTAC------------------------------------------------AAGGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538757 56 - 2125214 AGGGCCTGGGGTTCTGAGGGAGGCTCTGTACTTCCAGCACGTG--GTCACTAC------------------------------------------------AGGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120714 56 + 376347 GGGGCCTGGGGTTCTGAGGGAGGCTCTGTACTTCCAGCACATG--GTCACTAC------------------------------------------------AGGGC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270194 54 - 8137123 -GTGGCCTGGGCCCTGAGGGAGGTTCTGCA-TCCCTGCAGGGG--GGCATGAG------------------------------------------------GAAAC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61056100 51 - 77573801 GGGGCCTGGGGCTCCGACAGAGGCACTGAAGAACCAGCATGGGATGTGACC------------------------------------------------------- i canFam3.chr6 I 317 C 0 a score=15276.000000 s hg38.chr7_KI270899v1_alt 166029 4 + 190869 ---TAGG s panTro5.chr7_NW_015973580v1_random 41479 4 - 83720 ---TAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556108 4 + 162613886 ---TAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127833 4 - 432965 ---TAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187178 4 + 85365473 ---CAGG i nomLeu3.chr20 C 0 C 0 s chlSab2.chr28 140145 4 - 21531802 ---CAGG i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 332383 4 + 6586416 ---CAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62918 4 + 138751 ---CAGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377475 4 - 2409723 ---CAGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538813 4 - 2125214 ---CAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120770 4 + 376347 ---CAGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270248 4 - 8137123 ---CAGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61056151 4 - 77573801 TCTC--- i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 174531 51 - 2515279 I e cerAty1.NW_012002954v1 17008063 0 - 21915920 C e macNem1.NW_012019910v1 4417628 0 - 9440265 C e macFas5.chr3 33650038 0 + 192294377 C e rheMac8.chr3 34034088 0 + 185818997 C a score=1112369.000000 s hg38.chr7_KI270899v1_alt 166033 131 + 190869 CCAGGGCCCA------GACACAG---CAAGCCACCAAGAGGA----GGCCGGCCG-------GCGTGGAAGCCTCGCAGAGGGTGAATTCCAAAGAGGGCCCCTCCT---GCTCTGAGACCCACACTCCCGAGCCACACTCAGCAGGTGACGTG s panTro5.chr7_NW_015973580v1_random 41483 127 - 83720 CCAGGGCCCA------GACACAG---CAAGCCACCAAGAGGA----GGCTGGC-----------ATGGAAGCCTCGCAGAGGGTGAATTCCAAAGAGGGCCCCTCCT---GCTCTGAGACCCGCACTCCCGAGCCACACTCAGCAGGTGACGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556112 127 + 162613886 CCAGGGCCCA------GACACAG---CAAGCCACCAAGAGGA----GGCCGGC-----------ATGGAAGCCTCGCAGAGGGTGAATTCCAAAGAGGGCCCCTCCT---GCTCTGAGACCCGCACTCCCGAGCCACACTCAGCAGGTGACGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127837 131 - 432965 CCAGGGCCCA------GACACAG---CAAGCCACCAAGAGGA----GGCCGGCCG-------GCGTGGAAGCCTCGCAGAGGGTGAATTCCAAAGAGGGCCCCTCCT---GCTCTGAGACCTGCACTCCCAAGCCACACTCAGCAGGTGACGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187182 130 + 85365473 CCAGGGCCCA------GACACAG---CAATCCACCAAGAAGA----GGCCGGCCG-------GCGTAGAAGCATTGCAGAGGGTGAATTCCAAAGAGGGCGCCTCCT---GCTCTGAGACCCGCATTCCCGAGCCACACTC-GCAGGTGACCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034088 126 + 185818997 CCGGGGCCCA------GGCACAG---C-AGCCACCAAGAGGA----GGCCGGC-----------ATGGACGCCTTGCAGAGAGTGAATTCCAAAGACAGCTCCTCCT---GCTCTGAGACCCTCGCTCCCGAGCCACACTCAGCAGGTGACACG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650038 126 + 192294377 CCGGGGCCCA------GGCACAG---C-AGCCACCAAGAGGA----GGCCGGT-----------GTGGACGCCTTGCAGAGGGTGAATTCCAAAGACAGCTCCTCCT---GCTCTGAGACCCTCGCTCCCGAGCCACACTCAGCAGGTGACACG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4417628 126 - 9440265 CCGGGGCCCA------GGCACAG---C-AGCCACCAAGAGGA----GGCCGGC-----------GTGGACGCCTTGCAGAGGGTGAATTCCAAAGACAGCTCCTCCT---GCTCTGAGACCCTCGCTCCCGAGCCACACTCAGCAGGTGACACG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008063 126 - 21915920 CCGGGGCCCA------GGCACAG---C-AGCCACCAAGAGGA----GGCCGGC-----------GTGGACGCCTTGCAGAGAGTGAATTCCAAAGACAGCTCCTCCT---GCTCCGAGACCCTCGCTCCGGAGCCACACTCAGCAGGTGACACG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140149 121 - 21531802 CCAGGGCCCA------GGCACAG---C-AGCCACCAAGAGGA----GGACGGC-----------ATGGGCGCCTTGCAGTGGGTGAATTCCAGAG--AGCCCCTCCT---GCTCCGAGACCCTCGCTCCCAAGCCACACTCAGCAGGTGAC--- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 174582 126 - 2515279 CCAGGGCCCA------GGCACAG---C-AGCCACCAAGAGGA----GGCCGGC-----------GTGGACGCCTTGCAGAGAGTGAATTCCAAAGACAGCTCCTCCT---GCTCCGAGACCCTCGCTCCCGAGCCACACTCAGCAGGTGACACG i manLeu1.NW_012101810v1 I 51 C 0 s colAng1.NW_012117710v1 332387 130 + 6586416 CCAGGGCCCA------GGCACAG---C-AGCCACCAAGAGGAGGCTGGCCGGC-----------ATGGAAGCCTTGCAGAGGGTGAATTCCAAAGAGAGCCCCTCCT---GCTCCGAGACCCTCCCTCCCGAGCCACACTCAGCAGGTGACACG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 62922 130 + 138751 CCAGGGCCCA------GACACAG---CGAGCCACCAAGAGG-----GACCAGCCA-------AGGTCAGAGCCTCGCAGAGGGTGAATTCCAAAGAGGGACCTTCCT---ACTCTGAGACTGTCATTCCTAAGCCACACTCAGCAGGTGACGTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377479 130 - 2409723 CCAGGGCCTG------GACACAG---CAATCCACCAAGAGG-----GGCCAGCCG-------AGGTCAGAGCCTCGCAGAGGGTGAATTCCAAAGAGGGACCCTCCT---ACTCTGAGACCCTCACTCCCAAGCCACACTCAGCAGGTGATGTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538817 118 - 2125214 CCAGGGCCCG------GACACAG---CGATCCACCAAG------------------------AGGTCAGAGCCTCGCAGAGGGTGAATTCCAAAGAGGGACCCTCCT---ACTCTGAGACCCTCACTCCCAAGCCACACTCAGTAGGTGACGTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120774 130 + 376347 CCAGGGCCCG------GACACAG---CGATCCACCAAGAGG-----GGCCAGCTG-------AGGTCAGAGCCTTGCAGAGGGTGAATTCCAAAGAGGGACCCTCCT---ACTCTGAGACCCTCACTCCCGAGCCACACTCAGCAGGTGACGTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270252 115 - 8137123 --AGGGGTCA------GAGGCTGGTTC-ACCCACCTTGA-------TGCCAGT-------------------CTTGCAAAGGGCAAATCCTGAAGGGCCCTCCTTCT---GCCCTGAGAGCCCCCCTCATGAGCCGCACTCA-CTGCTGACAGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61056155 138 - 77573801 CCAGAGTCCAAGCTGTGACATGG---C------CAGGGTTGG----GGGTAGTTGTCTTCCCTGACTGTAGGCCTGCAGGGGG--AATTCTGATGGTGCACCCCTCTCTCACTCTAAGACCCCTG-TCAGGAGCCACACTCAGATGGTACCTTG i canFam3.chr6 C 0 I 620 a score=103651.000000 s hg38.chr7_KI270899v1_alt 166164 11 + 190869 CAACAAGACCC s panTro5.chr7_NW_015973580v1_random 41610 11 - 83720 CAACAAGACCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556239 11 + 162613886 CAACAAGACCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127968 11 - 432965 CAACAAGACCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187312 11 + 85365473 CAACAAGACCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034214 11 + 185818997 CAACAATACCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650164 11 + 192294377 CAACAAGACCA i macFas5.chr3 C 0 I 516 s macNem1.NW_012019910v1 4417754 11 - 9440265 CAACAAGACCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008189 11 - 21915920 CAACAAGACCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140270 9 - 21531802 --ACAAGACCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 174708 11 - 2515279 CAACAAGACCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 332517 11 + 6586416 CAACAAGACCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63052 11 + 138751 CAGCAAGACCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377609 11 - 2409723 CAGCAAGACCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538935 11 - 2125214 CAGCAAGACCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120904 11 + 376347 CCACAAGACCC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2270367 0 - 8137123 C e canFam3.chr6 61056293 620 - 77573801 I a score=-7795.000000 s hg38.chr7_KI270899v1_alt 166175 2 + 190869 tt s panTro5.chr7_NW_015973580v1_random 41621 2 - 83720 tt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556250 2 + 162613886 tt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127979 2 - 432965 TT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187323 2 + 85365473 TT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034225 2 + 185818997 TC i rheMac8.chr3 C 0 I 514 s macFas5.chr3 33650691 2 + 192294377 tc i macFas5.chr3 I 516 C 0 s macNem1.NW_012019910v1 4417765 2 - 9440265 tc i macNem1.NW_012019910v1 C 0 I 616 s cerAty1.NW_012002954v1 17008200 2 - 21915920 TC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140279 2 - 21531802 tc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 174719 2 - 2515279 TC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 332528 2 + 6586416 TC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63063 1 + 138751 T- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377620 1 - 2409723 T- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538946 1 - 2125214 T- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120915 1 + 376347 T- i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2270367 0 - 8137123 C e canFam3.chr6 61056293 620 - 77573801 I a score=27264.000000 s hg38.chr7_KI270899v1_alt 166177 6 + 190869 agggtt s panTro5.chr7_NW_015973580v1_random 41623 6 - 83720 agggtt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556252 6 + 162613886 agggtt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127981 6 - 432965 AGGGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187325 6 + 85365473 AGGGTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034741 6 + 185818997 agggtc i rheMac8.chr3 I 514 C 0 s macFas5.chr3 33650693 6 + 192294377 agggtc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418383 6 - 9440265 agggtc i macNem1.NW_012019910v1 I 616 C 0 s cerAty1.NW_012002954v1 17008202 6 - 21915920 Ggggtc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140281 6 - 21531802 agagtc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 174721 6 - 2515279 Ggggtg i manLeu1.NW_012101810v1 C 0 I 443 s colAng1.NW_012117710v1 332530 6 + 6586416 Ggggtc i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2270367 0 - 8137123 C e canFam3.chr6 61056293 620 - 77573801 I e aotNan1.NW_018514293v1 120916 0 + 376347 C e saiBol1.JH378296 377621 0 - 2409723 C e cebCap1.NW_016107703v1 538947 0 - 2125214 C e calJac3.chrUn_GL286444 63064 0 + 138751 C a score=11846.000000 s hg38.chr7_KI270899v1_alt 166183 4 + 190869 aggg s panTro5.chr7_NW_015973580v1_random 41629 4 - 83720 aggg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556258 4 + 162613886 aggg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127987 3 - 432965 A-GG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187331 1 + 85365473 A--- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034747 4 + 185818997 aggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650699 4 + 192294377 aggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418389 4 - 9440265 aggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008208 4 - 21915920 aggg i cerAty1.NW_012002954v1 C 0 I 120 s chlSab2.chr28 140287 4 - 21531802 aggg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175170 4 - 2515279 aggg i manLeu1.NW_012101810v1 I 443 C 0 s colAng1.NW_012117710v1 332536 4 + 6586416 aggg i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2270367 0 - 8137123 C e canFam3.chr6 61056293 620 - 77573801 I e aotNan1.NW_018514293v1 120916 0 + 376347 C e saiBol1.JH378296 377621 0 - 2409723 C e cebCap1.NW_016107703v1 538947 0 - 2125214 C e calJac3.chrUn_GL286444 63064 0 + 138751 C a score=37184.000000 s hg38.chr7_KI270899v1_alt 166187 9 + 190869 ttagggtta s panTro5.chr7_NW_015973580v1_random 41633 9 - 83720 ttacggtta i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556262 9 + 162613886 ttagggtta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127990 9 - 432965 TTAGGGTTA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34034751 9 + 185818997 ttagggtca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650703 9 + 192294377 ttagggtca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418393 9 - 9440265 ttagggtca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008332 9 - 21915920 ttagggtca i cerAty1.NW_012002954v1 I 120 C 0 s chlSab2.chr28 140291 9 - 21531802 tcagggtga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175174 9 - 2515279 ttagggtca i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 332540 9 + 6586416 tcagggtca i colAng1.NW_012117710v1 C 0 I 426 e otoGar3.GL873611 2270367 0 - 8137123 C e canFam3.chr6 61056293 620 - 77573801 I e aotNan1.NW_018514293v1 120916 0 + 376347 C e saiBol1.JH378296 377621 0 - 2409723 C e cebCap1.NW_016107703v1 538947 0 - 2125214 C e calJac3.chrUn_GL286444 63064 0 + 138751 C e nomLeu3.chr20 187332 0 + 85365473 C a score=55161.000000 s hg38.chr7_KI270899v1_alt 166196 9 + 190869 gggttaggg s panTro5.chr7_NW_015973580v1_random 41642 9 - 83720 gggttaggg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556271 9 + 162613886 gggttaggg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 127999 9 - 432965 GGGTTGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187332 9 + 85365473 GGGTTAGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034760 9 + 185818997 gggtcaggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650712 9 + 192294377 aggtcaggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418402 9 - 9440265 aggtcaggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008341 9 - 21915920 gggtcaggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140300 9 - 21531802 gggtcaggg i chlSab2.chr28 C 0 I 251 s manLeu1.NW_012101810v1 175183 9 - 2515279 gggtcaggg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 332975 9 + 6586416 gggtcaggg i colAng1.NW_012117710v1 I 426 C 0 s calJac3.chrUn_GL286444 63064 3 + 138751 ------GGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377621 3 - 2409723 ------GAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538947 3 - 2125214 ------GGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120916 3 + 376347 ------GGG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2270367 0 - 8137123 C e canFam3.chr6 61056293 620 - 77573801 I a score=7905.000000 s hg38.chr7_KI270899v1_alt 166205 2 + 190869 AC s panTro5.chr7_NW_015973580v1_random 41651 2 - 83720 AC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556280 2 + 162613886 AC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128008 2 - 432965 AC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187341 2 + 85365473 AC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034769 2 + 185818997 AG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650721 2 + 192294377 AG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418411 2 - 9440265 AG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008350 2 - 21915920 AG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 175192 2 - 2515279 AG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 332984 2 + 6586416 AG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63067 2 + 138751 AC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377624 2 - 2409723 AC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538950 2 - 2125214 AC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120919 2 + 376347 AC i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2270367 0 - 8137123 C e canFam3.chr6 61056293 620 - 77573801 I e chlSab2.chr28 140309 251 - 21531802 I a score=827087.000000 s hg38.chr7_KI270899v1_alt 166207 95 + 190869 CCCAGGC-TCCATGCATGCCAGGGAGAGGCAGC-GGTGTGCGAGGGCCTCCTGGTGCCTGGCAGACCAGGAGTGAATTTTGG-CTGTCACCTTCTCTG s panTro5.chr7_NW_015973580v1_random 41653 95 - 83720 CCCAGGC-TCCATGCATGCCAGGGAGAGGCAGC-GGTGTGCGAGGGCCTCCTGGTGCCTGGCAGACCAGGAGTGAATTTTGG-CTGTCACCTTCTCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556282 95 + 162613886 CCCAGGC-CCCATGCATGCCAGGGAGAGGCAGC-GGTGTGCGAGGGCCTCCTGGTGCCTGGCAGACCAGGAGTGAATTTTGG-CTGTCACCTTCTCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128010 95 - 432965 CCCAGGC-TCCATGCATGCCAGGGAGAGGCAGC-GGTGTGCGAGGGCCTCCTGGTGCCTGGCAGACCAGGAGTGAATTTTGG-CTGTCACCTTCTCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187343 96 + 85365473 CCCAGGCAGGGAAAAAAGCCAGGTAGAGGCAGC-GGTGTACGAGGGCCTCCTGGTGCCTGGCAGACCAGGAGTGAATTTTGG-CTGTCACCCTCTCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034771 95 + 185818997 CCCAGGC-TCCATTCGTGCCCGGGAGAGGCTGC-GGCAGTCCAGGGCATTCCGGTGCCTGGCAGACAAGGAGCGAATTTTGG-CCGTCACCCTCTCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650723 95 + 192294377 CCCAGGC-TCCATTCGTGCCCGGGAGAGGCTGC-GGCAGTCCAGGGCATTCTGGTGCCTGGCAGACAAGGAGCGAATTTTGG-CCGTCACCCTCTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418413 95 - 9440265 CCCAGGC-TCCATTCGTGCCCGGGAGAGGCTGC-GGCAGTCCAGGGCATTCTGGTGCCTGGCAGACAAGGAGCGAATTTTGG-CCGTCACCCTCTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008352 95 - 21915920 CCCAGGC-TCCATTCGTGCCCGGGAGAGGCTGC-GGCAGCCCAGGGCATTCTGGTGCCTGGCAGACAAGGAGCGAATTTTGG-CCGTCACCCTCTCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140560 95 - 21531802 CCCAGGC-TCCATCCATGCCAGGGAGAGGCCAC-GGCAGCCAAGGGCATTCTGGTGCCGGGCAGACAAGCAGCGAATTTTGG-CCATCACCCTCTCTG i chlSab2.chr28 I 251 C 0 s manLeu1.NW_012101810v1 175194 95 - 2515279 CCCAGGC-TCCATTCATGCCCGGGAGAGGCTGC-GGCAGCCCAGGGCATTCTGGTGCCTGGCAGACAAGGAGCGAATTTTGG-CCGTCACCCTCTCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 332986 95 + 6586416 CCCAGGC-CCCATGTGTGCCAGAGAGAGGCTGC-GGCAGCCTAGGGCGTTCTGGTGCCTGGCAGACAAGGAGTGAATTTTGG-CTGTCACCCTCTCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63069 96 + 138751 CCCAGGC-TCCATGCATGCCAGGGAGAGGTAGT-GGCATCTGAGGGCATTCTGCTGCCTGACAGACCAGCAGTGAATTTCGGTTTGTCACCCTCTCTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377626 89 - 2409723 CCCAGGC-TC------TCCCAGGGGGAGGCAGC-GGCATCCGAGGGCATTCTGCTGCCTGACAGACCAGCAGTGAATTTCAG-TGGTCACCCTCTCTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 538952 93 - 2125214 CCCAGGC-TCCATGCATGCCAGGGAGAGGCAGC-AGCATCCGAGGGCATTCTGCTGCCTGACAGACCAGTAGT--ATTTCGG-TGGTCACCCTCTCTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 120921 91 + 376347 CCCAGTC-TCCACGCATGCCGGGGAGAGGCGGC-GGCGTCTGAGGGCGTTCTGCTGCCTGACAGACCGGGAGTGAATTTCGG-GGGTCACC----CTG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270367 81 - 8137123 ----------------TGCTATGAAGAGGCCACAGGCGTTCAAGGGCAGTCTGGGGTCTGACAGGCCAGGAGTGGATTTTGG-TGGCTACCTTCTCTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61056293 620 - 77573801 I a score=697689.000000 s hg38.chr7_KI270899v1_alt 166302 75 + 190869 AGTTACTCCAG---------------TGT-------AG---------AGAGGCAAGG----CCTGGGT-CCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAGAATGGGGG s panTro5.chr7_NW_015973580v1_random 41748 75 - 83720 AGTTACTCCAG---------------TGT-------AG---------AGAGGCAGGG----CCTGGGT-CCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAGAATGGGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556377 75 + 162613886 AGTTACTCCAG---------------TGT-------AG---------AGAGGCAGGG----CCTGGGT-CCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAGAATGGGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128105 75 - 432965 AGTTACTCCAA---------------TGT-------AG---------AGAGGCAGGG----CCTGGGT-CCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAGAATGGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187439 74 + 85365473 AGTTACTCCAG---------------TGT-------AG---------AGAGGCAGGG----CCTGGGT-CCAGGGTTGTCTCAGTCTCAATGCAGCCCCTCA-AATGGGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034866 76 + 185818997 AGTGACTCCAG---------------TGT-------GG---------AGACGCAGGG----CCTGGGTCCCAGGGTTGTCGCAGTCTCAGTGCAGCCCCTCAAAATGGGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650818 76 + 192294377 AGTGACTCCAG---------------TGT-------GG---------AGACGCAGGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAAAATGGGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418508 76 - 9440265 AGTGACTCCAG---------------TGT-------GG---------AGACGCAGGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAAAATGGGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008447 76 - 21915920 AGTGACTCCAG---------------TGT-------GG---------AGACGCAGGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAAAATGGGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140655 76 - 21531802 AGTGACTCCAG---------------TGT-------AG---------AGAAGCAGGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAAAATGGGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175289 69 - 2515279 AA-------AG---------------TGT-------GG---------AGACGCAGGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAAAATGGGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 333081 76 + 6586416 AGTGACTCCAC---------------TGT-------AG---------AGAGGCAGGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAGTGCAGCCCCTCAAAATGGGGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63165 75 + 138751 AGTTTCCCCAG---------------TGT-------GA---------GGAGGCAGGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAAGGCAG-CCCTCGAAATGGGGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377715 75 - 2409723 AGTTTCTTCAG---------------TGT-------AG---------GGAGGCCAGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAAGGCAG-CCCTCAAAATGGGGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 539045 75 - 2125214 AGTTTCTCCAG---------------TAT-------AG---------GGAGGCAGGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAAGGCAG-CCCTCAAAATGGGGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 121012 75 + 376347 AGTTTCTCCAG---------------TGT-------AG---------GGAGGCAGGG----CCTGGGTCCCAGGGTTGTCTCAGTCTCAAGGCAA-CCCTCAAAATGGGGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270448 100 - 8137123 AGTTACTCTGACCCTGGCTCCCCCTCTGT-------GGGCTTGGTTTGCAAGTTGAGACCTCCTTGGT--CAGGCTGGTATGAGCAGCAGGACAG--TCTCAGAAAGGCGG i otoGar3.GL873611 C 0 I 380 s canFam3.chr6 61056913 83 - 77573801 AGTCACTCCTA---------------CGCTCCAACAAG---------TGAGACCAGG----CCACTGCCCCTGGGGCTTATACACCTCAATGCAGCTGTTCCAAGAAAGGG i canFam3.chr6 I 620 C 0 a score=308598.000000 s hg38.chr7_KI270899v1_alt 166377 30 + 190869 GCCCATGCCTAGCACCCTGGGTGGGGAGGA s panTro5.chr7_NW_015973580v1_random 41823 30 - 83720 GCCCATGCCTAGCACCCTGGGTGGGGAGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556452 30 + 162613886 GCCCATGCCTAGCACCCTGGGTGGGGAGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128180 30 - 432965 GCCCATGCCTAGCACCCTGGGTGGGGAGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187513 30 + 85365473 GCCCGTGCCTAGCACCCCGGGTAGGGAGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034942 30 + 185818997 GCCCATGCCCAGCACCCCGGGTGGGGAAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650894 30 + 192294377 GCCCATGCCCAGCACCCCGGGTGGGGAAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418584 30 - 9440265 GCCCATGCCCAGCACCCCGGGTGGGGAAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008523 30 - 21915920 GCCCATGCCCAGCACCCCGGGTGGGGAAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140731 30 - 21531802 GCCCATGCCCAGCACCCTGGGTGGGGAAGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175358 30 - 2515279 GCCCATGCCCAGCACCCCGGGTGGGGAAGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 333157 30 + 6586416 GCCCATGCCCAGCACCCTGGGTGGGGAAGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63240 30 + 138751 ACCCATGCCCAACTCCCTGGGTAGGGAGGA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377790 30 - 2409723 ACCCATGTCCAACGCCCTGGGTGGGGAGGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 539120 30 - 2125214 ACCCATGCCCAACGCCCTGGGTGGGGAGGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 121087 30 + 376347 ACCCATGCCCAACACCCTGGGTGGGGAGGA i aotNan1.NW_018514293v1 C 0 I 4027 s canFam3.chr6 61056996 25 - 77573801 GCCAATGCACACACTTCTGGGTGGG----- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2270548 380 - 8137123 I a score=366715.000000 s hg38.chr7_KI270899v1_alt 166407 41 + 190869 GCAGGCAGCTAGCTGGAGCTTCTGGCCCTTTTAAAAGAGGC s panTro5.chr7_NW_015973580v1_random 41853 41 - 83720 GCAGGCAGCTAGCTGGAGCCTCTGGCCCTTTAAAAAGAGGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556482 41 + 162613886 GCAGGCAGCTAGCTGGAGCCTCTGGCCCTTTTAAAAGAGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128210 40 - 432965 GCA-GCAGCTAGCTGGAGCCTCTGGCCCTTTTAAAAGAGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187543 37 + 85365473 GCAGGCAGCCAGCTGGAGCCTCTGGCCCTTTTA----AGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34034972 41 + 185818997 GCAGGCAGCTAGCTGGAGCCTCTGGCCATTTCAAAAGAGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650924 41 + 192294377 GCAGGCAGCTAGCTGGAGCCTCTGGCCATTTCAAAAGAGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418614 41 - 9440265 GCAGGCAGCTAGCTGGAGCCTCTGGCCATTTCAAAAGAGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008553 41 - 21915920 GCAGGCAGCTAGCTGGAGCCTCTGGCCATTTCAAAAGAGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140761 41 - 21531802 GCAGGCAGCTAGCTGGAGCCTCTGGCCATTTTAAAAGTGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175388 41 - 2515279 GCAGGCAGCTAGCTGGAGCCTCTGGCCATTTCAAAAGAGGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 333187 41 + 6586416 GCAGGCAGCTAGTTGGAGCCTCTGGCCATTTTAAAAGAGGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63270 41 + 138751 GCAGGCAGCTAGCTAGAGCCTCTGGCCCTTTTAGAAGAGGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377820 41 - 2409723 GCAGGCAGCTAGCCGGAGCCTCTGGCCCTTTTAGAAGAGGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 539150 41 - 2125214 GCAGGCAGCTAGCTGGAGCCTCTGGCCCTTTTAGAAGAGGC i cebCap1.NW_016107703v1 C 0 C 0 s canFam3.chr6 61057021 30 - 77573801 -----------GCTGGGGTCTCCCGATCCTTGCAGAGAAGC i canFam3.chr6 C 0 I 5 e otoGar3.GL873611 2270548 380 - 8137123 I e aotNan1.NW_018514293v1 121117 4027 + 376347 I a score=51681.000000 s hg38.chr7_KI270899v1_alt 166448 6 + 190869 CCCATT s panTro5.chr7_NW_015973580v1_random 41894 6 - 83720 CCCATT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556523 6 + 162613886 CCCATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128250 6 - 432965 CCCATT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187580 6 + 85365473 CCCATT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035013 6 + 185818997 CCCATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650965 6 + 192294377 CCCATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418655 6 - 9440265 CCCATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008594 6 - 21915920 CCCATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140802 6 - 21531802 CCCATT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175429 6 - 2515279 CCCATT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 333228 6 + 6586416 CCCATT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63311 6 + 138751 CCCATG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377861 6 - 2409723 CCCACG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 539191 6 - 2125214 CCCACT i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2270548 380 - 8137123 I e canFam3.chr6 61057051 5 - 77573801 I e aotNan1.NW_018514293v1 121117 4027 + 376347 I a score=251578.000000 s hg38.chr7_KI270899v1_alt 166454 24 + 190869 CCCTGGGCCTCGAGGGAGTGGCTG s panTro5.chr7_NW_015973580v1_random 41900 24 - 83720 CCCTGGGCCTCGAGGGAGTGGCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556529 24 + 162613886 CCCTGGGCCTCGAGGGAGTGGCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128256 24 - 432965 CCCTGGGCCTCGAGGGAGTGGCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187586 24 + 85365473 CCCTGGGCCTTGAGGGAGTGGCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035019 24 + 185818997 CCCTGGGCCTCGAGGGAGTGGCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650971 24 + 192294377 CCCTGGGCCTCGAGGGAGTGGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418661 24 - 9440265 CCCTGGGCCTCGAGGGAGTGGCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008600 24 - 21915920 CCCTGGGCCTCGAGGGAGTGGCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140808 23 - 21531802 CCCTGGGCCT-GAGGGCGTGGCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175435 24 - 2515279 CCCTGGGCCTCGAGGGAGTGGCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 333234 24 + 6586416 CCCTGGGCCTCAAGGGGGTGGCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63317 24 + 138751 CCCTGGGCCTCAAGGGAGTGGCtg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377867 24 - 2409723 CCCTGGGCCTCGAGGGAGTGACTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 539197 24 - 2125214 CCCTGGGACTCAAGGGAGTGGCTG i cebCap1.NW_016107703v1 C 0 I 819 s aotNan1.NW_018514293v1 125144 24 + 376347 CCCTGGACCTCGAGGGAGTGTCTG i aotNan1.NW_018514293v1 I 4027 C 0 e otoGar3.GL873611 2270548 380 - 8137123 I e canFam3.chr6 61057051 5 - 77573801 I a score=182526.000000 s hg38.chr7_KI270899v1_alt 166478 34 + 190869 TGCACATTCAGACATGCACTGACCCATGTacaca s panTro5.chr7_NW_015973580v1_random 41924 34 - 83720 TGCACATGCAGACATGCACTGACCCATGTACACA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556553 34 + 162613886 TGCACATGCAGACATGCACTGACCCATGTACACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128280 34 - 432965 TGCACATGCAGACATGCACTGACCCATGTACACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187610 34 + 85365473 TGCAcatgcatgcatgcattaacccatgtaggca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035043 34 + 185818997 TGTACATGCAGACAGGCACTAACCCAAGTacgca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33650995 34 + 192294377 TGTACATGCAGACAGGCACTAACCCAAGTacgca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418685 34 - 9440265 TGTACATGCAGACAGGCACTAACCCAAGTacgca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008624 34 - 21915920 TGTACATGCAGACAGGCACTAACCCAAGTacgca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140831 34 - 21531802 TGCACTTGCAGACAGGCACTAACCcaggtacaca i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175459 34 - 2515279 TGTACATGCAGACAGGCACTAACCCAAGTacgca i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 333258 34 + 6586416 TGCACATGCAGACAGGCGCTAACCCAGGTacgca i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63341 34 + 138751 cacacatgcacacatacacgcacatgggtatgca i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 377891 20 - 2409723 cgcacatgtacacacacaca-------------- i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 125168 16 + 376347 cacacacgcacacaca------------------ i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2270548 380 - 8137123 I e canFam3.chr6 61057051 5 - 77573801 I e cebCap1.NW_016107703v1 539221 819 - 2125214 I a score=158611.000000 s hg38.chr7_KI270899v1_alt 166512 32 + 190869 cacacatacacgcacacgtgtatgcacactca s panTro5.chr7_NW_015973580v1_random 41958 24 - 83720 CAC--------GCACACGTGTATGCACACTCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556587 24 + 162613886 CAC--------GCACACGTGTATGCACACTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128314 23 - 432965 CAC--------GCACACATGTATG-ACACTCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187644 32 + 85365473 cacacatacatgcaCACGTTTAAGCACACTCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035077 32 + 185818997 cacacatacacgcacacgtgtacacacactca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33651029 32 + 192294377 cacacatacacgcacacatgtacacacactca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418719 32 - 9440265 cacacatacacgcacacatgtacacacactca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008658 32 - 21915920 cacacatacacgcacacgtgtacacacactca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140865 28 - 21531802 cacacatacacgcacaggtgtacaca----ca i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175493 28 - 2515279 cacacatacacgcacacgtgtacaca----ca i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 333292 28 + 6586416 cacacatacacgtacacgtgtacaca----ca i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 63375 32 + 138751 caatcacacatgcatgtgggcatgcacattca i calJac3.chrUn_GL286444 C 0 I 459 s saiBol1.JH378296 377911 28 - 2409723 ----cacacacgcacctgggtatgcacaatca i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 125184 28 + 376347 ----cacacacgcacaTGGGCATGCACAACCA i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61057056 32 - 77573801 cacacacacaccaacacacgtgtgcactcaaa i canFam3.chr6 I 5 C 0 e otoGar3.GL873611 2270548 380 - 8137123 I e cebCap1.NW_016107703v1 539221 819 - 2125214 I a score=95316.000000 s hg38.chr7_KI270899v1_alt 166544 21 + 190869 cac--gtatatttgtacatacac-- s panTro5.chr7_NW_015973580v1_random 41982 21 - 83720 CAC--GTATATTTGTACATACAC-- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556611 21 + 162613886 CAC--GTATATTTGTACATACAC-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128337 20 - 432965 CAC---TATATTTGTACACACAT-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187676 23 + 85365473 CACGTGTGTATTCGTACATACAT-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035109 19 + 185818997 cacaTGGATATTTGTACAT------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33651061 19 + 192294377 cacaTGGATATTTGTACAT------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418751 23 - 9440265 cacatggatatttgtacatacac-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008690 23 - 21915920 cacatggatatttgtacatacac-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 140893 21 - 21531802 cac--ggatatctgtacatacac-- i chlSab2.chr28 C 0 I 177 s manLeu1.NW_012101810v1 175521 23 - 2515279 cacatggatatttgtacatacac-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 333320 23 + 6586416 cacatggatgtttgtacatacac-- i colAng1.NW_012117710v1 C 0 I 57 s calJac3.chrUn_GL286444 63866 21 + 138751 --catgtatgtttgtacatgtac-- i calJac3.chrUn_GL286444 I 459 C 0 s saiBol1.JH378296 377939 19 - 2409723 ----cacatgtatgtacatgtac-- i saiBol1.JH378296 C 0 C 0 s canFam3.chr6 61057088 21 - 77573801 ----tatacatgcgtgcacacacac i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2270548 380 - 8137123 I e aotNan1.NW_018514293v1 125212 0 + 376347 C e cebCap1.NW_016107703v1 539221 819 - 2125214 I a score=44204.000000 s hg38.chr7_KI270899v1_alt 166565 27 + 190869 atgtgcatacatccacatgtacaggta s panTro5.chr7_NW_015973580v1_random 42003 27 - 83720 GTGTGCATAAACCCACATGTACAGGTA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556632 27 + 162613886 GTGTGCATACACCCACATGTACAGGTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128357 27 - 432965 GTGTGCATACATCCACATGTACAGGTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187699 27 + 85365473 GTGTGCATACCTCCACATGTACACATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035128 19 + 185818997 --------ACATACACGTGCACACAGG i rheMac8.chr3 C 0 I 6 s macFas5.chr3 33651080 19 + 192294377 --------ACATACACGTGCACACAGG i macFas5.chr3 C 0 I 6 s macNem1.NW_012019910v1 4418774 21 - 9440265 ------acacatacacgtgcacacaGG i macNem1.NW_012019910v1 C 0 I 6 s cerAty1.NW_012002954v1 17008713 21 - 21915920 ------acacatacacgtgcacacaGG i cerAty1.NW_012002954v1 C 0 I 6 s manLeu1.NW_012101810v1 175544 21 - 2515279 ------acacatacacgtgcacacaGG i manLeu1.NW_012101810v1 C 0 I 6 s calJac3.chrUn_GL286444 63887 27 + 138751 atatatgcacatgggtatacacattga i calJac3.chrUn_GL286444 C 0 I 36 s saiBol1.JH378296 377958 23 - 2409723 ata----cacacgggcatgcacattta i saiBol1.JH378296 C 0 I 187 s aotNan1.NW_018514293v1 125212 14 + 376347 ---------CACGCGCCTGTGCA---- i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61057109 19 - 77573801 ------atatgtgtgcatgcacgta-- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 333343 57 + 6586416 I e otoGar3.GL873611 2270548 380 - 8137123 I e chlSab2.chr28 140914 177 - 21531802 I e cebCap1.NW_016107703v1 539221 819 - 2125214 I a score=-1307.000000 s hg38.chr7_KI270899v1_alt 166592 1 + 190869 c s panTro5.chr7_NW_015973580v1_random 42030 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556659 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128384 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187726 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035153 1 + 185818997 A i rheMac8.chr3 I 6 C 0 s macFas5.chr3 33651105 1 + 192294377 A i macFas5.chr3 I 6 C 0 s macNem1.NW_012019910v1 4418801 1 - 9440265 A i macNem1.NW_012019910v1 I 6 C 0 s cerAty1.NW_012002954v1 17008740 1 - 21915920 A i cerAty1.NW_012002954v1 I 6 C 0 s chlSab2.chr28 141091 1 - 21531802 C i chlSab2.chr28 I 177 C 0 s manLeu1.NW_012101810v1 175571 1 - 2515279 A i manLeu1.NW_012101810v1 I 6 C 0 s calJac3.chrUn_GL286444 63950 1 + 138751 c i calJac3.chrUn_GL286444 I 36 C 0 s saiBol1.JH378296 378168 1 - 2409723 c i saiBol1.JH378296 I 187 C 0 s canFam3.chr6 61057128 1 - 77573801 a i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 333343 57 + 6586416 I e otoGar3.GL873611 2270548 380 - 8137123 I e aotNan1.NW_018514293v1 125226 0 + 376347 C e cebCap1.NW_016107703v1 539221 819 - 2125214 I a score=197540.000000 s hg38.chr7_KI270899v1_alt 166593 25 + 190869 acaCAGG--------------TATGCACGAAGGAGGTTC s panTro5.chr7_NW_015973580v1_random 42031 25 - 83720 ACACAGG--------------TATGCAGGAAGGAGGCTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556660 25 + 162613886 ACACAGG--------------TATGCACGAAGGAGGCTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128385 25 - 432965 ACACAGG--------------TATGCACGAAGGAGGCTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187727 39 + 85365473 ACACATGCACATGCACACAGCTATGCACGAAGGAGGCTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035154 25 + 185818997 ACACAGG--------------GATGCATGAAGGAGGCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33651106 25 + 192294377 ACACAGG--------------GATGCATGAAGGAGGCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418802 25 - 9440265 ACACAGG--------------GATGCATGAAGGAGGCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008741 25 - 21915920 ACACAGG--------------GATGCATGAAGGAGGCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 141092 25 - 21531802 ACACAGG--------------GATGCATGAAGGAGGCTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175572 25 - 2515279 ACACAGG--------------GATGCATGAAGGAGGCTC i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 63951 25 + 138751 acatagg--------------tatGCACAAAAGAGGCTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 378169 25 - 2409723 acacagg--------------tatgcaCAAAAGAGGCTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 540040 25 - 2125214 ACACAGG--------------TATGCGCAAAAGAGGCTC i cebCap1.NW_016107703v1 I 819 C 0 s aotNan1.NW_018514293v1 125226 24 + 376347 -CACAGG--------------TATGCATGAAAGAGGCTC i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61057129 13 - 77573801 acaAAAG--------------AATGCA------------ i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 333343 57 + 6586416 I e otoGar3.GL873611 2270548 380 - 8137123 I a score=2864.000000 s hg38.chr7_KI270899v1_alt 166618 7 + 190869 CCAAACC s panTro5.chr7_NW_015973580v1_random 42056 7 - 83720 CCAAACC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556685 7 + 162613886 CCAAACC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128410 7 - 432965 CCAAACC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187766 7 + 85365473 CCAAGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035179 2 + 185818997 CC----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33651131 2 + 192294377 CC----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418827 2 - 9440265 CC----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008766 2 - 21915920 CC----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 141117 2 - 21531802 CC----- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175597 2 - 2515279 CC----- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 63976 7 + 138751 CCAAGCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 378194 7 - 2409723 CCAAGCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 540065 7 - 2125214 CCAAGCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 125250 7 + 376347 CCAAGCA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270928 7 - 8137123 CCAATCC i otoGar3.GL873611 I 380 C 0 e colAng1.NW_012117710v1 333343 57 + 6586416 I e canFam3.chr6 61057142 0 - 77573801 C a score=14645674.000000 s hg38.chr7_KI270899v1_alt 166625 1480 + 190869 CTTTCTGCA-CCCCTTAGCTGCCTTCCAAAGGGACAC--------GTCCTGATTT---------------------CCCTGTGGTGGGACACTGAGCA------------TGCCCAGC--TTCTG------CGGGGC---CAGGTGACGCA----CACGAACTCAGGGTCTGCTGAG------------------GCAGGTGCATTGGCG--------------ACGGTGGACAGCAGAGAAGTGGGATGCCTAGC--------------------------------GGCAG-GGGCTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGACC--AGGTCCCG--------------CTGTCAACCAAGGGAAGCCAGGC--------------------CCTGGCCACCCGGCCCTGCATTTCAGAGGGGGCAGCACCCAGTGTTCTGGGGTctcagttactgaatgagcctgggcacctgcctgccctctctggcctcagtttaccccctgtact--gctgggcgagggatcagggcatagcgaaggaccatttcagctccgCTGGTG------------CCACACTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCT-GGGGTTTTCTGACAAAAGGGGAGCATGTTAGTGCTTGAAATGGCCTCACCTCTTGCTATTTTTGCAGGAAGCCTGAACGCAGTTGTTAAAAATAGAAATAATGAAGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGACTCCCAGGATCCTCTCCAGGCTTGTGATGATAAATGATCATTGGGCTGCATTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGAAAG-----TTTCTGC----CTTTTTTTTTTTTT--------------AAGAGGAAA--GCTGGAAAGGTGCTTGAGGCCTAATAACTTTGCTTGGTC---TTTTTTGGGCACTGGGCCCTGCATTTTCCACCTGGC--AATGCTGTGTGGGGCTTCTTCCAGGCACTCTGTGGGCCTCATGCCGCCTGTGCTGGCCGG-AGCCAGCGTGGCGATCAGACGTCTGGGTGTGCCCGGCA-----CGACCCCACCTCGCCGCTCCCCTGAGCTGTCC--TTCCCCTGCAGAGGGGCCAAGA----------------AGCACCCC-TGGGAGG-CCAT-----------------------------TAGTGTCAGCAAGAAAGGTACGGCA-------------GGGCGGGGCCAGGACAGGGTGAACAGGACCCCAGCGCTTGGTGGCCACGAGTCCCAGCTCT----------------GGGAGGAACAGGCCTTGAGGATGCAGAGAGGTTTGCATTGGCAAAAGTCTCGGCATCTCTC---------------------------------ATTTTTCCCGTACATGCACCACCA-CCGC-TGCTTCCTGCTG-TAGCCCCTCTCCG-CCAAGAGGCATTCCCAGCCCCCAGGA-CCATAGAGAGGGGCAGG-GGTCTTCAGCGTGGCTGAGGGCCACCGCCTGCGGCACGTGGGAGGAAGCTGCCA-ACTACCCCCATCCCCTGAGCTGAAGTCTCCTTGCATCTGGGCCTTGA-T-TTTTTAA-TGCGAGATGCAGCTCAAGGCTTGCGGTCATACTTCTGTCTTCAGGTGCGAAAAC--TGCGTTTTCTTCTTGAGTTCCGTGTTTCAGGGAGAGAATCGTGAAGAAACAGACTAAAGGACTTTGTTGCAAGCTACAGTCATGAAGAAGGACACGTGGGTGAGGCTGGGA s panTro5.chr7_NW_015973580v1_random 42063 1484 - 83720 CTTTCTGCA-CCCCTTAGCTGCCTTCCAAAGGGACAC--------GTCCTGATTT---------------------CCCTGTGGTGGGACCCTGAGCA------------TGCCCAGC--TTCTG------CGGGGC---CAGGTGATGCA----CACAAACTCAGGGTCTGCTGAG------------------GCAGGTGCATTGGTG--------------ACGGTGGACAGCAGAGAAGTGGGATGCCTAGC--------------------------------GGCAG-GGGCTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGACC--AGGTCCCG--------------CTGTCAACCAAGGGAAGCCAGGC--------------------CCTGGCCACCCAGCCCTGCATTTCAGAGGGGGCAGCACCCAGTGTTCTGGGGTctcagttactgaatgagcctgggcacctgcctgccctctctggcctcagtttaccccctgtact--gctgggcgacggatcagggcatagcgaaggaccatttcagctccgCTGGTG------------CCACATTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCT-GGGGTTTTCTGACAAAAGGGGAGCATGTTAGTGCTTGAAATGGCCTCACCTCTTGCTATTTTTGCAGGAAGCCTGAACGCAGTTGTTAAAAATAGAAATAATGAAGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGACTCCCAGGATCCTCTCCAGGCTTGTGATGATAAATAATCATTGGGCTGCGTTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGAAAG-----TGTCTGC----Cttttttttttttttttt----------AAGAGGAAA--GCTGGAAAGGTGCTTGAGGCCTAATATCTTTGCTTGGTC---TTTTTTGGGCACTGGGCCCTGCATTTTCCACCTGGC--AATGCTGTGTGGGGCTTGTTCCAGGCGCTCTGTGGGCCTCATGCCGCCTGTGCTGGCCGG-AGCCAGCGTGGCGATCAGACGTCTGGGTGTGCCCGGCA-----CGACCCCACCTCGCCGCTCCCCTGAGCTGTCC--TTCCCCTGCAGAGGGGCCAAGA----------------AGCACCCC-TGGGAGG-CCAT-----------------------------GAGTGTCAGCAAGAAAGGTACGGCA-------------GGGCGGGGCCAGGACAGGGTGAACAGGACCCCAGCGCTTGGTGGCCACGAGTCCCAGCTCT----------------GGGAGGAACAGGCCTTGAGGATGCAGAGAGGTTTGCATTGGCAAAGGCCTCGGCATCTCTC---------------------------------ATTTTTCCCGTACATGCACCACCA-CCGC-TGCTTCCTGCTG-TAGCCCCTCTCCA-CCCAGAGGCATTCCCAGCCCCCAGGA-CCATAGAGAGGGGCAGG-GGTCTTCAGCGTGGCTGAGGGCCACCGCCTGCGGCCCGTGGGAGGGAGCTGCCA-ACTACCCCCATCCCGTGAGCTGAAGTCTCCTTGCATCTGGGCCTTGA-T-TTTTTAA-TGCAAGATGCAGCTCAAGGCTTGCGGTCACACTTCTGTCTTCAGGTGCGAAAAC--TGCGTTTTCTTCTTGAGTTCCGTGTTTCAGGGAGAGAATCGTGAAGAAACAGACTAAAGGACTTTGTTGCAAGCTACAGTCATGAAGAAGGACACATGGGTGAGGCTGGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 556692 1479 + 162613886 CTTTCTGCA-CCCCTTAGCTGCCTTCCAAAGGGACAC--------GTCCTGATTT---------------------CCCTGTGGTGGGACCCTGAGCA------------TGCCCAGC--TTCTG------CGGGGC---CAGGTGATGCA----CACGAACTCAGGGTCTGCTGAG------------------GCAGGTGCATTGGTG--------------ACGGTGGACAGCAGAGAAGTGGGATGCCTAGC--------------------------------GGCAG-GGGCTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGACC--AGGTCCCG--------------CTGTCAACCAAGGGAAGCCAGGC--------------------CCTGGCCACCCGGCCCTGCATTTCAGAGGGGGCAGCACCCAGTATTCTGGGGTctcagttactgaatgagcctgggcacctgcctgccctctctggcctcagtttaccccctgtact--gctgggcgacggatcagggcatagtgaaggaccatttcagctccgCTGGTG------------CCACATTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCT-GGGGTTTTCTGACAAAAGGGGAGCATGTTAGTGCTTGAAATGGCCTCACCTCTTGCTATTTTTGCAGGAAGCCTGAATGCAGTTGTTAAAAATAGAAATAATGAAGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGACTCTCAGGATCCTCTCCAGGCTTGTGATGATAAATGATCATTGGGCTGCGTTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGAAAG-----TTTCTGC----CTTTTTTTTTTTT---------------AAGAGGAAA--GCTGGAAAGGTGCTTGAGGCCTAATATCTTTGCTTGGTC---TTTTTTGGGCACTGGGCCCTGCATTTTCCACCTGGC--AATGCTGTGTGGGGCTTGTTCCAGGCGCTCTGTGGGCCTCATGCCGCCTGTGCTGGCCGG-AGCCAGCGTGGCGATCAGACGTCTGGGTGTGCCCGGCA-----CGACCCCACCTCGCCGCTCCCCTGAGCTGTCC--TTCCCCTGCAGAGGGGCCAAGA----------------AGCACCCC-TGGGAGG-CCAT-----------------------------GAGTGTCAGCAAGAAAGGTACGGCA-------------GGGCGGGGCCAGGACAGGGTGAACAGGACCCCAGCGCTTGGTGGCCACGAGTCCCAGCTCT----------------GGGAGGAACAGGCCTTGAGGATGCAGAGAGGTTTGCATTGGCAAAGGCCTCGGCATCTCTC---------------------------------ATTTTTCCCGTACATGCACCACCA-CCGC-TGCTTCCTGCTG-TAGCCTCTCTCCG-CCAAGAGGCATTCCCAGCCCCCAGGA-CCATAGAGAGGGGCAGG-GGTCTTCAGCGTGGCTGAGGGCCACCGCCTGCGGCCCGTGGGAGGGAGCTGCCA-ACTACCCCCATCCCGTGAGCTGAAGTCTCCTTGCATCTGGGCCTTGA-T-TTTTTAA-TGCAAGATGCAGCTCAAGGCTTGCGGTCACACTTCTGTCTTCAGGTGCGAAAAC--TGCGTTTTCTTCTTGAGTTCTGTGTTTCAGGGAGAGAATCGTGAAGAAACAGACTAAAGGACTTTGTTGCAAGCTACAGTCATGAAGAAGGACACATGGGTGAGGCTGGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 128417 1474 - 432965 CTTTCTGCA-CCCCTTAGCTGCCTTCCAAAGGGACAC--------GTCCTGATTT---------------------CCCTGTGGTGGGACCCTGAGCA------------AGCCCAGC--TTGTG------CGGGGC---CAGGTGATGCA----CACGAACTCAGGGTCTGCTGAG------------------GCAGGTGCATTGGTG--------------ACAGTTGACAGCAGAGAAGTGGGATGCCTAGC--------------------------------GGCAG-GGGCTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGACC--AGGTCCCG--------------CTGTCAACCAAGGGAAGCCAGGC--------------------CCTGGCCACC--GACCTGCATTTCAGAGGGGGCAGCACCCAGTGTTCTGGGGTctcagttactgaatgagcctgggcacctgcctgccctctctggcctcagtttaccccctgtact--gctgggcgacgggtcagggcagagcgaaggaccatttcagctctgCCGGTG------------CCACATTGCTGAAGTCCTGGCCGCTTTTTCCTCCATCCC-AGGGTTTTCTGACAAAAGGGGAGCATGCTAGTGTTTGAAATGGCCTCACCTCTTGCTATTTTTGCAGGAAGCCTGAACGCAGTTGTTAAAAATAGAAATAATGAAAGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGACTCCCAGGATCCTCTCCGGGATTGTGATGATAAATGATCATTGGGCTGCATTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGAAAG-----TTTCTGC----CTTTTTTTTTTTT---------------AAGAGGAAA--GCTGGAAAGGTGCTTGAGGCCTAATATCTTTGCTTGGTC---TTTTTTGGGCACTGGGCCCTGCATTTTCCACCTGGC--AATGCTGTGTGGGGCTTGTTCCAGGCGCTCTGTGGGCCTCATGCCGCCTGTGCTGG-CGG-AGCCAGC-TGGCGATCAGACGTCTGGGTGTGCCCGGCA-----CGACCCCACCTCGCTGCTCCCCTGAGCT-CCC--TTCCCCTGCAGAGGGG-CAAGA----------------AGCACCCC-TGGGAGGCCCGT-----------------------------GAGTGTCAGCAAGAAAGGTACGGCA-------------GGGCGGGGCCAGGACAGGGTGAACAGGACCCCAGCGCTTGGTGGCCACGAGTCCCAGCTCT----------------GGGAGGAACAGGCCTTGAGGATGCAGAGAGGTTTGCACTGGCAAAGGCCTCGGCATCTCTC---------------------------------ATTTTTCCAATACATGCACCACCA-CCGC-TGCTTCCTGCTG-TAGCCCCTCTCCA-CCAAGAGGCATTCCCAGCCCCCAGGA-CCATAGAGAGGGGCAGG-GGTCTTCAGCATGGCTAAGGGCCACTGCCTGCGGCACATGGGAGGAAGCTGCCA-ACTACCCCCATCCCCTGAGCTGAAGTCTCCTTGCATCTGGGCCTTGA-T-TTTTTAA-TGCGAGATGCAGCTCAAGGCTTGTGGTCACACTTCTGTCTTCAGGTGCTAAAAC--TGCATTTTCTTCTTGAGTTCCGTGTTTCAGGGAGAGAATCGTGAAGAAACAGACTAAAGGACTTTGATGCAAGCTACAGTCATGAAGAAGGACATGTGGGTGAGGCTGGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 187773 1438 + 85365473 CTTTCTGCA-CCCCTTAGCTGCCTTCCAAAGGGACAG--------GTCCTGATTT---------------------CCCTGTGGTGGGACCCTGAGCA------------TGCCCAGC--TTCTG------CAGGGC---CAGGTGATGCA----CACGAACTCAGGGTCTGCT------------------------------------------------------TAAACAGCAGAGAAGTGGGATGCCTGGC--------------------------------GGCAG-GGGCTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGACC--AGGTCCTG--------------CTGTCAACCAAGGGAAGCCAGGC--------------------CCTGGCCACCCGGCCCTGCATTTCAGAGGGGTCAGCACCCATTGCTCTGGGGTcttagttactgaatgagcctgggcacctgcctgccctctctggcctcagtttaccccctgtact--gctgagtgacggatcagggcacaacgaaggaccatttcagctctgCTGGTG------------CCACATTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCT-GGGGTTTTCTGACAAAAGGGGAGCATGTTAGTGC-TGAAATGGCCTCACCTCTTGCTATTTTTGCAGGAAGCCTGAACGCAGTTGTTAAAAATAGAAATAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGGCTCCCAGGATCCTCTCCGGGCTCATGATGATAAATGATCATTGGCCTGCGTTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGAAAG-----TTTCTGC----CTTTTTTTTTTTT----------------AGAGGAAA--GCTGGAAAGGTGCTTGGGGCCTGATAACTTTGCCTGGTC---TTTATTGGGCACTGGGCCCTGCATTTTCCACCTGGC--AATGCTGTGTGGGGCTTGTTCCAGGCACTCTGTGGGCCTCGTGCCGCCTGTGCTGGCTGG-AGCCAGCGTGGCGATCAGATGTCTGGGTGTGCCCAGCA-----CGACCCCACCTCGCTGCTCCCCTGAGCTGTCC--TTCCCCTGCAGAGGGGCCAAGA----------------AGCACCCC-TGGGAGG-CCGT-----------------------------GAGTGTCAGCAAGAAAggcacggca-------------gggcggggccgggacagggTGAACAGGACCCCAGCGCTTGGTGGCCACGAGTCCCAGGTCT----------------TGGAGGAACAGGCCTTGAAGATGCAGAGAGGTTTGCCCTGGCAAAGACCTCGGCATCTCTC---------------------------------ATTTTCC------------------CCGC-TGCTTCCTGCTA-TAGCCCCTCTCCG-CCAAGAGGCAGTCCCAGCCCCCAGGA-CCATAGAGAGGGGCAGG-GGTCTTCAGTGTGGCTAAGGGCCACCGCCTTTGGCACATGGGATGGAGCTGCCA-ACTACCCCCATCCCCTGAGCTGAAGTCTCCTTGCATCTGGGCCTTGA-T-TTTTTAA-TGCAAGATGCAGCTCAAGGCTTGTGGTCGCACTTCTGTCTTCGGGTGCTAAAAC--TGCATTTTCTTCTTGAGTTCCGTGTTTCAGGGAGAGAATCACGAAGAAACAGACTAAAGGACTTTGTTGCAAGCTACAGTCGTAAAGAAGGACATGTGGGTGAGGCCGGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34035181 1490 + 185818997 CTCTCTGCA-CCCCTAAGCTGCCTTCCAAAGGGACAG--------GTCCTGATTT---------------------CCCTGTGGTGGGACCCCGAGCG------------TGCCCGGC---TCTG------CGGGGC---CAGGTGATGCA----CACCAACTCAGGGTCTGCTGAG------------------GCAGGTGCACTGGCG--------------ACGGTGGACAGCAGAGAAGCGGGATGCCTGGC--------------------------------GGCAG-GGACTCTGCCCTCATAGCTCCTCTGCTAGGGAGGGACC--AGGTCCCA--------------CTGTCAACCAATGGAAGCCAGGC--------------------CCTGGCCACCCGGCCCTGCATTTCAGAGGGGCCAGCACCCAGTGCTCTGGGGTcttagtcactgaatgagcctgggcacctgcctgccctctccggcctcagtcta-cccctgtgct--gctgggcggcggatcagggcatagcaaaggaccatttcagctctgCCGGTG------------CCACCTTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCC-AGGGTTTTCTGACAAAAGAGGAGCATGTTAGTGCTTGAAATGGCCTTACCTCTTGCTATTTTTGCAGGAGGCCTGAACGCAAGTGTTAAAAATAGAAATAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGGCTCCCAGGATTCTCTCCGAGCTCGTGATGATAAATGATCATTGGGCTGCATTTGTCCTTAGCTAATTTATCCTCGGCCTAGAGAGAAAG-----TTTCTGC----Cttttttttttttttttt----------AAGAGGAAA--GCTGGAAAGGTGCTTCAGGCCTAATATCTTTGCTTGGTCTCTTTTTTTGGGCACTGGGCCCTGTATTTTCCACCTGGC--AATGCCGTGTGGGGCTTGTTCCAGGCGCTCTACGGGCCTCGTGCCGCCTGTGCTGGCCGG-AGCCAGTGTGGCGATCAGATGTCTGGGTGTGCCTGGCA-----CGACCCCACCTCACTGCTCCCCTGAGCTGTCT--TTCCCCTGCAGAGGGGCCAAGG----------------AGCACCCC-TGGGAGG-CCGT-----------------------------GAGTGTCAGCAAGAAAggcacggca-------------gggcggggacagggcagggtgagcaggACTCCAGCGCGTGGTGGCCGCGAGTCCCAGCTCT----------------CAGAGGAACAGGCCTTGAAGATGCAGGGAGGTTTGCACCGACAAAAGCCTCGGCATCTCTC------------------------------TTTATTTTTACCTTACATGCACCGCCA-CTGC-GGCTTCCTGCTG-TAGCCTCTCCCCACCCGAGAGGCATTCCCAGCCCCCAGGA-CCACAGAGAGGGGCAGG-GGTCTTCAGTGTGGCTAAAGGCCACCGCCTGCAGCACCTGGGATGGAGCTGCCA-ACTACCCCCATCCTCAGAGCTGAAGTCTCCTAGCGTTTGGGCCTTGACT-TTCTTAA-TGTGAGATACAGCTCAAAGCTTGCGGTGACATTTCTGTCTTCGGGTGCTAAAAC--TGCATTTCCTTCTTGAGTTCCATGTTTCAGGGAGAGAATCATGAAGAAACAGAATAAAGGACTTTGTTGCAAGCTGCAGTCATAAAGAAGGACATGTGGGTGAGGCTGGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33651133 1489 + 192294377 CTCTCTGCA-CCCCTAAGCTGCCTTCCAAAGGGACAG--------GTCCTGATTT---------------------CCCTGTGGTGGGACCCCGAGCG------------TGCCCGGC---TCTG------CGGGGC---CAGGTGATGCA----CACCAACTCAGGGTCGGCTGAG------------------GCAGGTGCACTGGCG--------------ACAGTGGACAGCAGAGAAGCGGGATGCCTGGC--------------------------------GGCAG-GGACTCTGCCCTTATAGCTCCTCTGCTAGGGAGGGACC--AGGTCCCA--------------CTGTCAACCAAGGGAAGCCAGGC--------------------CCTGGCCACCCGGCCCTGCATTTCAGAGGGGCCAGCACCCAGTGCTCTGGGGTcttagtcactgaatgagcctgggcacctgcctgccctctccggcctcagtcta-cccctgtact--gctgggcggcggatcagggcatagcaaaggaccatttcaactctgCCGGTG------------CCACCTTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCC-GGGGTTTTCTGACAAAAGAGGAGCATGTTAGTGCTTGAAATGGCCTTACCTCTTGCTATTTTTGCAGGAGGCCTGAACGCAAGTGTTAAAAATAGAAATAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGGCTCCCAGGATTCTCTCCGAGCTCGTGATGATAAATGATCATTGGGCTGCATTTGTCCTTAGCTAATTTATCCTCGGCCTAGAGAGAAAG-----TTTCTGC----Cttttttttttttttttt----------AAGAGGAAA--GCTGGAAAGGTGCTTCAGGCCTAATATCTTTGCTTGGTCTC-TTTTTTGGGCACTGGGCCCTGTATTTTCCACCTGGC--AATGCCGTGTGGGGCTTGTTCCAGGCGCTCTACGGGCCTCGTGCCGCCTGTGCTGGCCGG-AGCCAGTGTGGCGATCAGATGTCTGGGTGTGCCTGGCA-----CGACCCCACCTCACTGCTCCCCTGAGCTGTCT--TTCCCCTGCAGAGGGGCCAAGG----------------AGCACCCC-TGGGAGG-CCGT-----------------------------GAGTGTCAGCAAGAAAggcacggca-------------gggcggggacagggcagggtgagcaggACTCCAGCGCGTGGTGGCCGCGAGTCCCAGCTCT----------------CAGAGGAACAGGCCTTGAAGATGCAGGGAGGTTTGCACCGACAAAAGCCTCGGCATCTCTC------------------------------TTTATTTTTACCTTACATGCACCGCCA-CCGC-GGCTTCCTGCTG-TAGCCTCTCCCCACCCGAGAGGCATTCCCAGCCCCCAGGA-CCACAGAGAGGGGCAGG-GGTCTTCAGTGTGGCTAAAGGCCACCGCCTGCAGCACCTGGGATGGAGCTGCCA-ACTACCCCCATCCTCAGAGCTGAAGTCTCCTAGCGTTTGGGCCTTGACT-TTCTTAA-TGTGAGATACAGCTCAAAGCTTGCGGTGACATTTCTGTCTTCGGGTGCTAAAAC--TGCATTTCCTTCTTGAGTTCCATGTTTCAGGGAGAGAATCATGAAGAAACAGAATAAAGGACTTTGTTGCAAGCTGCAGTCATAAAGAAGGACATGTGGGTGAGGCTGGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4418829 1489 - 9440265 CTCTCTGCA-CCCCTAAGCTGCCTTCCAAAGGGACAG--------GTCCTGATTT---------------------CCCTGTGGCGGGACCCCGAGCG------------TGCCCGGC---TCTG------CGGGGC---CAGGTGATGCA----CACCAACTCAGGGTCTGCTGAG------------------GCAGGTGCACTGGCG--------------ACAGTGGACAGCAGAGAAGCGGGATGCCTGGC--------------------------------GGCAG-GGACTCTGCCCTCATAGCTCCTCTGCTAGGGAGGGACC--AGGTCCCA--------------CTGTCAACCAAGGGAAGCCAGGC--------------------CCTGGCCACCCGGCCCTGCATTTCAGAGGGGCCAGCACCCAGTGCTCTGGGGTcttagtcactgaatgagcctgggcacctgcctgccctctccggcctcagtcta-cccctgtact--gctgggcggcggatcagggcatagcaaaggaccatttcagctctgCCGGTG------------CCACCTTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCC-GGGGTTTTCTGACAAAAGAGGAGCATGTTAGTGCTTGAAATGGCCTTACCTCTTGCTATTTTTGCAGGAGGCCTGAACGCAAGTGTTAAAAATAGAAATAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGGCTCCCAGGATTCTCTCCGAGCTCGTGATGATAAATGATCATTGGGCTGCATTTGTCCTTAGCTAATTTATCCTCGGCCTAAAGAGAAAG-----TTTCTGC----Cttttttttttttttttt----------AAGAGGAAA--GCTGGAAAGGTGCTTCAGGCCTAATATCTTTGCTTGGTCTC-TTTTTTGGGCACTGGGCCCTGTATTTTCCACCTGGC--AATGCCGTGTGGGGCTTGTTCCAGGCGCTCTACGGGCCTCGTGCCGCCTGTGCTGGCCGG-AGCCAGCGTGGCGATCAGATGTCTGGGTGTGCCTGGCA-----CGACCCCACCTCACTGCTCCCCTGAGCTGTCT--TTCCCCTGCAGAGGGGCCAAGG----------------AGCACCCC-TGGGAGG-CCGT-----------------------------GAGTGTCAGCAAGAAAggcacggca-------------gggcggggacagggcagggtgagcaggACTCCAGCGCGTGGTGGCCGCGAGTCCCAGCTCT----------------CAGAGGAACAGGCCTTGAAGATGCAGGGAGGTTTGCACCGACAAAAGCCTCGGCATCTCTC------------------------------TTTATTTTTACCTTACATGCACCGCCA-CCGC-GGCTTCCTGCTG-TAGCCTCTCCCCACCCGAGAGGCATTCCCAGCCCCCAGGA-CCACAGAGAGGGGCAGG-GGTCTTCAGTGTGGCTAAGGGCCACCGCCTGCAGCACCTGGGATGGAGCTGCCA-ACTACCCCCATCCTCAGAGCTGAAGTCTCCTAGCGTTTGGGCCTTGACT-TTCTTAA-TGCGAGATACAGCTCAAAGCTTGCGGTGACATTTCTGTCTTCGGGTGCTAAAAC--TGCATTTCCTTCTTGAGTTCCATGTTTCAGGGAGAGAATCATGAAGAAACAGAATAAAGGACTTTGTTGCAAGCTGCAGTCATAAAGAAGGACATGTGGGTGAGGCTGGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17008768 1477 - 21915920 CTCTCTGCA-CCCCTAAGCCGCCTTCCAAAGGGACAG--------GTCCTGATTT---------------------CCCTGTGGTGGGACCCCAAGCG------------TGCCCGGC---TCTG------CGGGGC---CAGGTGATGCA----CACCAACTCAGGGTCTGCTGAG------------------GCAGGTGCACTGGCG--------------ACGGTGGACAGCAGAGAAGCGGGATGCCTGGC--------------------------------GGCAG-GGACTCTGCCCTCATAGCTCCTCTGCCAGGGAGGGACC--AGGTCCCA--------------CTGTCAACCAAGGGAAGCCAGGC--------------------CCTGGCCACCCGGCCCTGCATTTCAGAGGGGCCAGCACCCAGTGCTCTGGGGTcttagtcactgaatgagcctgggcacctgcctgccctctctggcctcagtcta-cccctatact--gctgggcggcggatcagggcatagcaaaggaccatttcagctctgCCGGTG------------CCACCTTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCC-GGGGTTTTCTGACAAAAGAGGAGCATGTTAGTGCTTGAAATGGCCTTACCTCTTGCTATTTTTGCAGGAGGCCTGAACGCAAGTGTTAAAAATAGAAATAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGGCTCCCAGGATTCTCTCCGAGCTCGTGATGATAAATGATCATTGGGCTGCATTTGTCCTTAGCTAATTTATCCTCGGCCTAGAGAGAAAG-----TTTCTGC----C----TTTTTTTTTTTTT----------AAGAGGAAA--GCTGGAAAGGTGCTTCAGGCCTAGTATCTTTGCTTGGTCTC-TTTTTTGGGCACTGGGCCCTGTATTTTCCACCTGGC--AATGCCGTGTGGGGCTTGTTCCAGGCACTCTACGGGCCTCGTGCCGCCTGTGCTGGCCGG-AGCCAGCGTGGCGATCAGATGTCTGGGTGTGCCTGGCA-----CGACCCCACCTCACTGCTCCCCTGAGCTGCCT--TTCCCCTGCAG--------AGG----------------AGCACCCC-TGGGAGG-CCGT-----------------------------GAGTGTCAGCAAGAAAggcacggca-------------gggcggggacagggcagggtgagcaggACTCCAGCGCGTGGTGGCCACGAGTCCCAGCTCT----------------CAGAGGAACAGGCCTTGAAGATGCAGGGAGGTTTGCACCGGCAAAAGCCTCGGCATCTCTC------------------------------TTTATTTTTACCTTACATGCACCGCCA-CCGC-GGCTTCCTGCTG-TAGCCTCTCCCCACCCGAGAGGCATTCCCAGCCCCCAGGA-CCACAGAGAGGGGCAGG-GGTCTTCAGTGTGGCTAAGGGCCACCGCCTGCAGCACCTGGGATGGAGCTGCCA-ACTACCCCCTTCCTCAGAGCTGAAGTCTCCTATCGTATGGGCCTTGACT-TTCTTAA-TGCGAGATACAGCTCAAAGCTTGCGGTCACATTTCTGTCTTCGGGTGCTAAAAC--TGCATTTCCTTCTTGAGTTCCATGTTTCAGGGAGAGAATCATGAAGAAACAGAATAAAGGACTTTGTTGCAAGCTGCAGCCATAAAGAAGGACATATGGGTGAGGCTGGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 141119 1491 - 21531802 CTTTCTGCA-CCCC-AAGCTGCCTTCCAAAGGGACAG--------GTCCTCATTT---------------------CCCTGTGGTGGGACCCCGAGCG------------TGCCTGGC---TCTG------CGGGGC---CAGGTGATACA----CACCAACTCAGGGTCTGCTTAG------------------GCAGGTGCACTGGCG--------------ACGGTGGGCAGCAGAGAAGCGGGATACCTAGC--------------------------------GGCAG-GGACTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGACC--AGGTCCCA--------------CTGTCAATCAAGGGAAACCAGGC--------------------CCTGGCCACCCAGCCCTGCATTTCAGAGGGGCCAGCACCCAGTGCTCTGGGGTcttagtcactgaatgagcctgggcacctgccttccctctctggcctcagttta-ccccagtgct--gctgggcggtgcatcagggcatagcgaaggaccatttcagctctgCCGGTG------------CCGCCTTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCC-AGGGTTTTCTGACAAAACAGGAGCATGTTAGTGCTTGAAATGGCCTTACCTCTTGCTATTTTTGCAGGAGGCCTGAACGCAATTGTTAAAAATAGAAATAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGGCTCCCAGGATCCTCTCCGAGCTCGTGATGATAAATGATCATTGGGCTGTATTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGA-AAAG-----TTTCTGC----CttttttttttttttttttttttttATGAAAAGGAAA--GCTGGACAGATGCTCAGGGCTGAATATCTTTGCTTGGTCTC-TTTTTTGGGCACTGGGCCCTGCATTTTCCACCTGGC--AATGCCGTGTGGGGCTTGTTCCGGGCGCTCTACGGGCCTCGTGCCGCCTGTGCTGGCCGG-AGCCAGCGTGGCGATCAGATGTCTGGGTGTGCCCGGCA-----CAACCCCACCTCACTGCTCCCCTGAGCTGTCC--TTCCCCTGCAGAGGGGCCAAGG----------------AGCACCCC-TGGGAGG-CCGT-----------------------------GAGTGTCAGCAAGAAAggcacggca-------------gggcggggccagggcagggtgagcaggACCCCAGCGCGTGGCAGCCACGAGTCCCACCTCT----------------CAGAGGAACAGGCCTTGAAGA------GAGGTTTGCACTGGCGAAAGCCTCGGCGTCTCTC------------------------------TTTATTTTTACCTTACATGCACCACCA-CCGA-TGCTTCCTGCCG-TAGCCCCTCCCCACCCGAGAGGCATTCCCCGCGCCCAGGA-CCACAGAGAGGGGCAGG-GGTCTTCCGTGTGGCTAAGGGCCACCGCCTGCAGCACCTGAGAGGGAGCTGCCA-ACTACCCCCCTCCCCAGAGCTGAAGTCTCCTCGCGTTTGGGCCTTGACT-CTCTTAA-TGCGAGATACAGCTCGAGGCTTGCGGTCGCATTTCTGTCTTCGGGTGCTAAAAC--TGCATTTCCTTCTTGAGTTCCATGTTTCAGGGAGAGAATCATGAAGAAACAGAATAAAGGACTTTGTTGGAAGCTACGATTATAAAGAAGGACATGTGGGTGAGGCTGGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 175599 1486 - 2515279 CTCTCTGCA-CCCCTAAGCTGCCTTCCAAAGGGACAG--------GTCCTGATTT---------------------CCCTGTGGTGGGACCCCGAGCG------------TGCCCGGC---TCTG------CGGGGC---CAGGTAATGCA----CACCAACTCAGGGTCTGCTGAG------------------GCAGGTGCACTGGCG--------------ACGGTGGACAGCAGAGAAGCGGGATGCCTGGC--------------------------------GGCAG-GGACTCTGCCCTCATAGCTCCTCTGCCAGGGAGGGACC--AGGTCCCA--------------CTGTCAACCAAGGGAAGCCAGGC--------------------CCTGGCCACCCGGCCCTGCATTTCAGAGGGGCCAGCACCCAGTGCTCTGGGGTcttagtcactgaatgagcctgggcacctgcctgccctctctggcctcagtcta-cccctgtact--gctgggcagcagatcagggcatagcaaaggaccatttcagctctgCCGGTG------------CCACCTTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCC-GGGGTTTTCTGACAAAAGAGGAGCATGTTAGTGCTTGAAATGGCCTTACCTCTTGCTATTTTTGCAGGAGGCCTGAACGCAAGTGTTAAAAATAGAAATAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGGCTCCCAGGATTCTCTCCGAACTCGTGATGATAAATGATCATTGGGCTGCATTTGTCCTTAGCTAATTTATCCTCGGCCTAGAGAGAAAG-----TTTCTGC----CTTTTTTTTTTTTTT-------------AAGAGGAAA--GCTGGAAAGGTGCTTCAGGCCTAATATCTTTGCTTGGTCTC-TTTTTTGGGCACTGGGCCCTGTATTTTCCACCTGGC--AATGCCGTGTGGGGCTTGTTCCAGGCGCTCTACGGGCCTCGTGCCGCCTGTGCTGGCCGG-AGCCAGCGTGGCGATCAGATGTCTGGGTGTGCCTGGCA-----CGACCCCACCTCACTGCTCCCCTGAGCTGCCT--TTCCCCTGCAGAGGGGCCAAGG----------------AGCACCCC-TGAGAGG-CCGT-----------------------------GAGTGTCAGCAAAAAAggcacggca-------------gggcggggacagggcagggtgagcaggACTCCAGCGCGTGGTGGCCACGAGTCCCAGCTCT----------------CAGAGGAACAGGCCTTGAAGATGCAGGGAGGTTTGCACCGGCAAAAGCCTCGGCATGTCTC------------------------------TTTATTTTTACCTTACATGCACCGCCA-CCGC-GGCTTCCTGCTG-TAGCCTCTCCCCACCCGAGAGGCATTCCCAGCCCCCAGGA-CCACAGAGAGGGGCAGG-GGTCTTCAGTGTGGCTAAGGGCCACCGCCTGCAGCACCTGGGATGGAGCTGCCA-ACTACCCCCATCCTCAGAGCTGAAGTCTCCTATCGTTTGGGCCTTGACT-TTCTTAA-TGCGAGATACAGCTCAAAGCTTGCGGTCACATTTCTGTCTTCGGGTGCTAAAAC--TGCATTTCCTTCTTGAGTTCCATGTTTCAGGGAGAGAATCATGAAGAAACAGAATAAAGGACTTTGTTGCAAGCTGCAGTCATAAAGAAGGACATGTGGGTGAGGCTGGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 333400 1429 + 6586416 CTTTCTGCA-CCCCTAAGCTGCCTTCCAAAGGGACAG--------GTCCACATTT---------------------CCCTGTGGTGGGACCCCGAGCG------------TACCCGGC--TTCTG------CGGGGC---CAGGTGATGCA----CACCAACTCAGGGTCTGCTTAG------------------GCAGGTGCA----------------------------CAGCAGAGAAGTGGGATGCCTAGT--------------------------------GGCAG-GGACTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGACC--AGGTCCCA--------------CTGTCAACCAAGGAAAGCCAGG---------------------CCTGGGTACCCGGCCCTGTATTTCAGAGGGGCCAGCAGACAGTGCTCTGGGGTcttagtcactgaatgagcctgggcacctgccttccctctctggcctcagttta-ccccagtact--gctgggcggcggatcagggcatagcgaaggaccatttcagctctgCCGGTG------------CCACCTTGCTGAAGTCCTGGCCGCTTTTTCCTGCATCCC-GGGGTTTTCTGACAAAAGAGGAGCATGTTAGTGCTTGAAATGGCCTTACCTCTTGCTATTTTTGCAGGAGGCCTGAACGCAATTGTTAAAAATAGAAATAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGGCTCCCAGGATCCTCTCCGGGCTTGTGATGATAAATGATCATTGGGCTGCATTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGAAAG-----TTTCTGC----CTTCTTTTTTTTTTT-------------AAGAGGAAA--GCTGGAAAGGTGCTTCAGGCCTAATATCTTTGCTTAGTCTC-TTTTTTGGGCACTGGGCCCTGCATTTTCCACCTGGC--AATGCCGTGTGGAGCTTGTTCCAGGCGCTCTATGGGCCTCGTGCTGCCTGTGCTGGCCAG-AGCCAGCGTGGCGACCAAACGTCTGGGTGTGCCCGGCA-----CGGCCCCACCTCACTGCTCCCCTGAGCTGTCC--CTCCCCTGCAGAGGGGCCAAGG----------------AGCACCCC-TGGGAGG-CCGT-----------------------------GAGTGTCAGCAAGAAAggcacggca-------------gggcggggccagggcagggTGAACAGGACCCCGGCGCGTGGTGGCCACGACTCCCAGCTCT----------------CGAAGGAACAGGCCTTGAAGAAGCAGAGAGGTTGGC-CTGGCAAAAGCCTC-------------------------------------------------------------------------TGCTGCCTGCGG-TAGCCCCTCCCCACCCAAGAGGCATTCCCAGCCTGCAGGA-CCACAGAGAGGGGCAGG-GGTCTTCCGTGTGGCTAAGGGCCACCGCCTGCAGCACCTGGGAAGGAGCTGCCA-ACT-CCCCCATCCTCAGAGCTGAAGTCTCCTCGCATTTGGGCCTTGACT-TTTTTAA-TGCGAGATACAGCTCGAGGCTTGCAGTCGCATTTCTGTCTTCGGGTGCTAAAAC--TGCATTTTCTTCTTGAGTTCCATGTTTCAGGGAGAGAATCATGAACAAACAGAATAAAGGACTTTGTGGCTAGCTACGGTCATAGAGAAGGACATGTGGGTGAGGCTGGGA i colAng1.NW_012117710v1 I 57 C 0 s calJac3.chrUn_GL286444 63983 1489 + 138751 -CTTCTGCA-CCCCTTAGCTGCCTTCCAAAGGGACAG--------GGCCTGATTT---------------------CCCTGTGGTGGGATCCTGAGGG------------TGCACAGC--TTCTC------TGGGGC---CAGGTGATACA----CAGGATCTCAGCGCTGGCTGAG------------------GCAGGTGCATTGGCA--------------ACAGTGGACAGCAGAGAACTGTGAGGCTTAGT--------------------------------GGCAC-GGGCTCTGCCCTCACAGCTCCTCTGCCAAGCAGGGACC--AGGCCCCACTGTCCTAGCCAAGGTGTCAACCAAGGGACACCAGGC-------------CTCCTGTCCTGGCCACCGGGTCCTGCATTTCATAGGAG---------------CTGGGGTCTTCATCACTGGATGAGTCTGGGCA-CTGCCTGCCCTCTCTGGCCTCGGTTTA-CCCCCATACT--ACTGGTCAATGGATTAGGGCATAGCAAAGGACCATTTCAGCTCCACTGGTG------------CCACATGGCTGAAGTCCTGGCCACTTTTTCCTGCAGTCC-GGGGTTTTCTGACAAAAGAGGAGCATGTTAGTGCTTGAAATGGCCTCACCTCTTGCTATTTTTGCAGGAGGCCTGAACACAATTTTTAAAAATAGAAATAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCCAAGGCCAGGACAGGGCTCCCAGGATCCTCTCCGGGCTTGTGATGATGAATGATCATTGCACTGCATTTGTTCTTAGCTAATTTATCCTTGGCCTAGAGAGAAAG-----TTTCTGCtttttttttttttttttttt------------tGGAGGAAA--GCTGGAAAGGTGATTCAGGCCTCATATCTTTCCTTGGTC-----TTTTGGGTACTGAGCCCTGCATTTCCCAGCTGGCAAAATGCTGCATGGGGCTTGTTCTAGGTGCTCTGTCGGCCTCATGCTGCCTGTGCTAGCTGG-AGCCAGCGTGGTGATCACACATCTGGGTGTGCCCAGCA-----TGACCCCACCTTGCGGCTCCTCTGAGCTGCCC--TTTCCCTGCAGAGGGGCCAAAA----------------ATCGCCCC-TGGGAGG-CCAT-----------------------------GAGTGTAAGCAAGAAAGGCATGGCA-------------GGGT-GAGCCAGGACAGGACAACCAAAACCCCAGTGCTTGGTGGCCATGCATCCCAGCTCT----------------TAGAGGTACAGGCCTTGAAGATGCAGAGAGGTTTGCACCTGGAAAGACCTTGGTATCTCT----------------------------------ACTTTCCCCCAACTTGCACCACCA-CTGC-TGCTCCCTGCTG-TAGCTCCTCCCTG-CCAAGAGGCATTCCCAG-CCCCAGGA-CCATAGAGAAGCATAGA-GGTCTTCAGTGTGGCTAAGTGTCACCACCTGTGGCACCTGGGACTGAGCTGCCA-GCTACGCCCATCCCCAGAGCTGAAGTCTCCTTGCGTTTGGGCCTTGATTATTTTTAA-TGCAGGATGCAGCTCAAGGCTTGCA-CCGCACTTCTGTATTCAGGTGCTAAAACAATGCAGTTTCTTCTTGAGTTCCCTGTTTCAAGGAGAGAACCATGAAGAAACAGACGAAAAGACTTTGTTGCAAGCTACAGTCATAAAGGAGGGCATGCAGGTGAGGCTGGGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 378201 1431 - 2409723 -CTTCTGTA-CCCCTTAGCTGTCTTTCAAAGGGACAG--------AGTCTGATTT---------------------CCCTGTGGTGGGACCCTGAGCG------------TGGCCAGC--TTCTC------GGGGGC---CAGGTGATGCA----CAGGATCTCAGCGCCGGCTGAG------------------GCAGGTGCATTGGTG--------------AC-GTGGACACTAGAGAACTGTGAGGCTTAGC--------------------------------GGCAC--GGCTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGACC--AGGCCCCA-----------------------------------------------------CTGTCCTGGCCACCCAGTCCTGCATTTCAGAGGAG---------------CTGGGGTCTTCGtcactggatgagtctgggca-ctgcctgccctctctggcctcagttta-cccctgtact--accgggcaatggattagggcatagcaaaggaccatttcagctcCACTGCTG------------CCACATGGCTGAAGTCCTGGCCACTTTTTCCTGCATCCC-GGGGTTTTCTGACAAAAGAGTAGCATGTCAGTGCTTGAAATGGCCTCACCTCTTGCTATTTTTGCAGGAGACCTGAACATAATTGTTAAAAATAGAAATAATGAGGGAAAGTAGCAGCTTCTGCCCTTGAGTCCTGAGGCCTGGACAGGGCTCCCAGGATCCTCTCTGGGCTCGTGATGATGAATGATCATCGTGCTGCATTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGAAAG-----ATTCTGC------CTTTTTTTTTTTTT------------AAGAGGAAA--GCTAGAAAGGTGATTCTGGCCTCACATCTTTGCTTGGTC----TTTTTGGGTACTGAG-CCTGCATTTCCCAGCCGGCAAAATGCTGCGTGGGGCTTGTTCTAGGCTCTCTGTCGGCCTCATGCCGCCTGCGCTAGCCGG-AGCCAGCGTGGTGATCACACATCTGGGTGTGCCCAGCA-----CGACCCCACCTTGCGGCTCCCCTAAGCTGCCC--TTCCCCTGCAGAGGGG-CAAAA----------------ATCACCCCTTGGGAGG-CCAT-----------------------------GAGTGTAAGCAAGAAAGGCATGGCA-------------GGGT-GAGCCAGGACAGGGCAAACAAAACCCCAGCACTGGGTGGCCATGAGTCCCAGCTCT----------------TAGAGGTACAGGCCTCGACGATGCAGAGAGGTTTGCACTGGGAAAGACCTTGGTATCTCT----------------------------------ACTTTCCCCCAACATGCACTACCA-CCGC-TGCTCCCTGCTG-CAGCTCCTCCCTG-CCAAGAGGCATTCCCAGCCCCCAGGA-CCGTAGAGATACATAGA-GGTCTTCAGTGTGGCTAAGTGACACCACCTGTGGCACCTGGGACTGAGCTGCCA-GCTACG--------CAGAGCTGAAGTCTCCTTGCATTTGGGCCT---TTATTTTTAA-TGCAGGATGCAGCTCAAGGCTCGCA-CCGCACTTCCGTATTCGGGTGCTAAAACAATTCAGTTTCTTCTTGAGTTCCATGTTTCGAGGCTAGAACCATGAAGAAACAGACGAAAGGACTTTGTTGCAAGCTACGGTCATAAAGGAGGGCATGTGGGTGAGGCTGGGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 540072 1487 - 2125214 -CTTCTGCA-CCCCTTAGCTGCCTTTCAAAGGGTCAG--------GGCCTGATTT---------------------CCCTGTGGTGGGACCCTGAGCG------------TGCCCAGC--TTCTG------TGGGGC---CAGGTGATGCT----CAGGATCTCAGCACTGGCTGAG------------------GCAGGTGCATTGGCG--------------ACGGTGGATAGCAGAGAACTGTGAGGCTTGGC--------------------------------AGCAT--GGCTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGTCC--AGGCCCCACTGTCCTGGCCAAGGTATCAACCAAGGGACACCAGGC-------------CTGCTGTCCTGGCCACCCGGTCCTGCATTTCAGAGGAG---------------CTGGGATCTTCGtcactggatgagtctgggca-ctgcctgccctctctggcctcagctta-cccccgtact--actgggcaatggattagggcgtagcaaaggaccatttcagctctgCTGGTG------------CCACATGGCTGAAGTCCTGGCCACTTTTTCCTGCATCCC-GGGGTTTTCTGACAAAAAAGGAGCATGTCAGTGCTTGAAATGGCCTCACCTCTTGCTATTTTTGCAGGAGACCTGAACATAATTGTTAAAAATAGAAATAATGAGAGAAAGCAGCAGCTTCTGCCCTTGAGTCCTGAGGCCAGGACAGGGCTTCCAGGATCCTCTCCGGGCTTGTGATGATGAATGATCATTGTGCTGCATTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGAAAG-----TTTCTGC----CTCTTTTTTTTTTTTT------------TAGAGGAAA--GCTAGAAAGGTGATTCAGGCCTCATATCTTTGCTTAGTC----TTTTTGGGTACTGAGTCCTGCATTTCCCAGCCAGCAAAATGCTGCATGGGACTTGTTCTAGGCACTCTGTCGGCCTCATGCCGCCTGTGCTAGCCGG-GGCCAGCATGATGATCACACATCTGGGTGTGCCCAGCA-----TGACCCCACCTTGCAGCTCCCCTGAGCTGCCC--TTCCCCTGCTGAGGGGACAAAA----------------ATCACCCCTTGGGAGG-CCAT-----------------------------GAGTGTAAGCAAGAAAGGCATGGCA-------------GGGT-GAGCCAGGACAGGACAAACAAAACCCCAGCGCTTGGTGGCCATGAGTCCTAGCTCT----------------TAGAGGTACAGGCCTTGAAGATGCAGAGAGGTTTGTACTAGGAAAGACCTTGGTATCTCT----------------------------------ATTTTCCCCCCACATGCACCACCA-CCGC-TGCTCCCTGCTG-TAGCTCCTGCCTG-CCAAGAGGCATTCCCAGCCCCCAGGA-CCATAGAGAGACATAGA-GGTCTTCAGTACGGCTAAGTGCCACCACCTGCAGCACCCGGGACTGAGCTGCCA-GCTACGCCCATCCCCAGAGCTGAAGTCTCCTTGCATTTGGGCCTTGATTATTTTTAA-TGCAGGATGCAGCTCAATGCTTGTA-CTGCACTTCTGTATTCGGGTGCTAAAACAATTCAGTGTCTTCTTGAGTTCCATGTTTCAAGGCTAGAGCCATGAAGAAACGGACAAAAGGACTTTGTTGCAAGCTACAGTCATGAAGGAGTGCATGCGGGTGAGGCTGGGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 125257 1434 + 376347 -CTTCTGCA--CCCTCAGCTGCCTTCCAAAGGGACAG--------GGCCTGATTT---------------------CCCTGTGGTGGGACCCTGAGCA------------TGCCCAGC--TTCTG------GGGGGC---CAGGTGATGCA----CAGGATCTCAGCGCCGGCTGAG------------------GCAGGTGCATTGGTG--------------ACGGTGGACAGCAGAGAACTGTGAGGCTTAGC--------------------------------GGCAC-GGGCTCTGCCCTCACAGCTCCTCTGCCAGGCAGGGACC--AGGCCCCA-----------------------------------------------------CTGTCCTGGCCACCTGGTTCTGCGTTTTGGAGGAG---------------CTGGGGTCTTTGtcactgggtgagtgtgggca-ctgcctgccctctctggcctcagttta-cccccgtact--actgggcaatggattagggcatagcaaaggaccgtttcagctccgCTGGGG------------CCACGTGGCTGAAG--------------TCCTGCATCCC-GGGGTTTTCTGACCAAAGCAGAGCACGTTAGTGCTTGAAATGGCCTCACCTCTTGCTATTTTTGCAGGAGACCTGAACACAATTGTTAAAAATAGAAGTAATGAGGGAAAGCAGCAGCTTCTGCCCTTGAGTCCCGAGGCCAGGACAGGGCTCCCAGGATCCTCTCTGGGCTCGTGATGATGAATGATCATTGTGCTGCATTTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGGACG-----TTTCTGC-CTCCTTTTTTTTTTTTTTT------------AAGAGGAAA--GCTAGAAAGGTGATTCAGGCCTCATATCTTTGCTTGGTC-----TTTTGGGTACTGAGCCCTGCATTTCCCAGCCGGCAAAATGCTGCGTGGGGCTCGTTCTAGGCACTCCGTCAGCCTCATGCCACCTGTGCTAGCCGG-AGCCAGTGTGGTGATCCCACATCTGGCTGTGCCCAGCA-----CAACCCCACCTTGCCGCTCCCCTGAGCTGCCC--TTCCCCTGCAGAGGGGCCAAAA----------------ATCACCCCTTGGGAGG-CCGT-----------------------------GTGTGTAAGCAAGAGAGGCACGGCA-------------GGGT-GAGCCAGGACAGGGCAAACGAAGCCCCAGTGCTTGGTGGTCATGAGTCCCAGCTCT----------------TAGAGGTACAGGCCTTGAAGATGCAGAGAGGTTTGCACTGGAAAAGACCTTGGCATCTCT----------------------------------ATGTTCCCCCCACATGCACCACCA-CTCC-TGCTCCCTGCTG-TAGCTCCTGCCTG-CCAAGAGGCATTCCCAGCCCCCAGGA-CCATAGAGAGACGTAGA-GGTCTTCAGTGTGGCTACGTGCCACCAGTTGCGGAACCTGGGACTGAGCTGCCA-GCTACGCCCATCCCCGGAGCTGAAGGCTCCTTGCGTTTTGGCCTTGATTACTTTCAA-CGCAGGATGCAGCTCAAGGCTTGCA-CCGCACTTCTGCCTTCGGGTGCTGAAACAATGCAGTTTCTTCTTGAG-TCCATGTTTCCAGGTGAGAACCATGAAGAAACAGACGAAAGGACTTTGTTGGAAGCTACAGTCACAAAGGAGGGCATGCGGGTGAGGCTGGGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2270935 1589 - 8137123 TTTATTGCATCTCCTCTGTTCTCTTTCCAAGAGACACCAATCCATGTCTTGGCCTAGAGCCAGGATGGGGATGAGATGCTGTGCAGGGCACCAGTGTGGAGGCAGGACTCTGCACAGTGACTCT-------CACAGC---CATGGGAAGCAGAAGCCTGGGCCCAGGGTTGACTCAGTCTTAATACAGCCCTTGAGAATGGGGACTGATGCAGCACCAGCTCCAATGAGGGCCAGT-GGGAATTGTGTTCTCTGGCACTCCCTGGAGGGTGAACTCAGGAGACTGGCAGGCAGGGGGCTCTTTCCTCAC--CTCTTCCAGCTGATGGGGCCTCAGGACTCCA--------------CTGTCGAACACAGAATGCCATGCTCTGTGGCCAGGGCTCCCTCCCTGGCCTCTCAGTCCTGCATCTCAGAGGAGTCA-TACCCGCTGCTCTAAG-CCTCACTCACCGAGTGACCTCAGACACACTCCTGCCCTCCCTGGCCTTGATTTA-CCCACTTGCTCAGTTGCGTGATGGGTCAGAGATTTGCTGA-GACTATTTCAGCTCAGCTGGTG------------CCACATTGCCAAAATCCTGGCTGCTTTTCCCTGCATCCT-GTGGTTTTCAGACAAAAAGGGAGCATGTTAGTGCCTGAAACAGTCTCACCTCTTGCTATTTTTGCAGGAGGCCCAAACGCAATTGTTAAAAATAGAAATAATGAGGGAAGGCAGAAGCTTCTGACCTTGAG-CCGGGGGCCAGGACGGGGCACCCAGGATCCTCTCTGGGCTGAAGATGATAAATGACCATCGAGCTGCATTTGTCCTTAGCTAATTTATCCTTGGCCCAGAGAGAAAG-----TTTCTGC----CTTATTTTTT------------------A--AGGAAA--GCTGGG-AGGTGCTGCAGGCCTAATGGGTTTGCTTGGTA---TTTTCTGGGCTCTGGGCCTAGTGTTCTCTGCCTGAC--AATGCTGT---GGACTTCTTCCTGGTGCTCCTTGGGTCCTGCCCTGCCTGTGCTGGCCGG-AAGCAATGTGGTGATCAGACATTTG---GTGCCCAGCAGTTAGTTCCCCCACCCCTCTGCTGTCCTGAACCG--------CCCTGCAAAGGAGCTGA-A----------------AGCACACT-TGGGAGG-CCAT-------------------------------GTGCCAGCTGGACACTGGCGTCCTCCCTGCTGTCCTGGGTGGGACTGGGGAAGGA-----AAGGACCCAGCACTTTGCTGCTGTGAGTCCCAACCCTTCTCCCCACCCCACCCCCCGGAAGTAGGCCCTGGAGGAGT-GCAAGCTCCACACCAGGAAAGGCGCCGGCACCTCT----------------------------------GTGTTCTCCCCTCACACTCCTCCACCCAC-TGCTGTATGCTG-TA--CCCCTCCTGCCCAAGAGG-ACCCCCAGGCTCCAGGC-CTACAGAGAGA-------------------AGCCAGCCCCCACC-CCTAAGGC-CCTGGGACTGAGCTGC-------CCTCCATCATGGCAGCGCTAGCCCTACTGGATTTGAACCTTGAAT-TTTTTAAGTCCAGGATGCAGCTCAAGGCTCATAGCTGCATCTCTGTCTTCAGGTGTGTATACATGGCATATTTTTCTTGAGTTCCTTGTTTCAAAGAGAGAATCAGGAGGAAACAGACTAAAGGACTTCGCTGCAAGTTACAGTC-TAAAGAGGGATGTGTGGATGAGGCTGGGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61057142 1335 - 77573801 --TTCTTCA-TCCCTGAGA-GCTTCCCGAAGGGGCTC--------ATCCTAGTTT----------------------CCTGTGACAGGTGACAG---G------------TGTGCAGC--CTCTGAGGTCTCGGGACTCTTGGGAGATGCC----C---------------------------------------CTCTGTGCAGTTGTG-------------------GACCTGTAGGG------------------------------------------------AACAG-G----CCATCCTCATTGTTCCCCTGCCCA-----GACC--TGAGCTCA--------------CT--------------------C--------------------CCTGACC------------------------------------------------------------GACCTTGAGCACCTGCCTACTCT-----GCCTCAGTTTA-CCC----ACA--GTAAGCAGTTGGACCAGAGCATCA-GTGGGGTTATTTCAGCTTCAGCCATGGAGGACTCACCCCTATGCTACCCAAATCCTGGCCAGTTTTTCCTGCATCCCTGTGGTTTTCTGAC-AAAGAGGGGCATGCTAGCACTTGAAATGTTCTCACCTCTTGCTATTTTTGCAAGAGGCCTGAACGCAATTGTTAAAAATAGAAATAATGAGGGAAGGCAGAAGCTTCTGACCTTGAGTCACGAGGCCAGGACAGG-TTCCCAGTATCCTCCC--GGCTCACGATGATAGATGATGGTCGCGCAGCATGTGTCCTTAGCTAATTTATCCTTGGCCTAGAGAGAGAGAAAGTTTTCTGC----TTGCTTTTTTTTTT--------------GAGGGGATGTTGCTGGAAAGGTGCTTCAGGACCAGTAGCTTTGCCTGCTC---TGTTTTGGGTGC------------TCTCTGGCTGGC--AGTGCTGGGGGGAGCTCACCCCAGGTGCTCTG-AATCATCATGCCACCTGTGCTGGCCAGAAGCCAGCAAG--------------------GCCCACCA-----GA----CATATTCCTGCTCCCCTGAGTTGACCCGTCCCCCTGCAAAGGGACCATGAAGGCTGAGGATCTTCCAGCATCCT-TGGGAGG-CTGTTTGTCCATAGAACAAGGGCTATCCTCCCCGAGATTCCACAAAAAGG---CCGTA-------------GGGCAGGGCCTGG---GAGGTAGTGGGACTCCAGCATCTGACTATTGCAGG--CCTACTCT----------------GGAAAATACA-----------------GAAGTTTGCATCTGGAAGGCCCTTGGCATCTCCTACCCAGGAAGGTTCAGGACAGCAGCTTCTTTCCACTCTCTTCCCACATACACAGCCA-CCCCTTGCCCCATGCTACTAACCTCTCCCAG-ACAAGAGGCGCCCCCACCCCTCATGAGTCATAGAGAGAGGCAGGAGATCTTGAGAGAGGCCTGCATCCACCACCCACAGCACCTGGAACAGAGCTGAGATGCTGTACCCATCCT--GGACTTAGGTCTGCACAGATTTAGAGCTTCTTT-TTTAAAA-TCCAGGACGCTGCTCAAAGCTCACAGTTGTACCTCCGCCTTCAGGTGCTGAGAC------------------------------AGGGAGAGATT----------CAAACCAAAGGGCTTTCTTGCAAGTTGCAGT-GTGGAGAAGG-CATGCGGTTGTGGCT---- i canFam3.chr6 C 0 C 0 a score=3107233.000000 s hg38.chr7_KI270899v1_alt 168105 355 + 190869 GCCCGGGGAGCCTGGTGTCAGCCCCAGTCCGAACAGCGGAGCCAGCAGGAAGACCCTGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTGTGTTTAGA-TTTTGTCTCTTCCATGTTATTCCCATGGCAGGCTCTGCACCAGTCCCCGGCG-------------------------CTGCCTGCGGCATCTGA---------------------TTCTGCCGGCGCTGCCCGCTTAGCTTATGGGTATGCAGAAGATCTGCATCATGGTTCCTGCTGAAGAAGGGAgtgtgtggctg----tgtgtgtgtg-gctgtgtgtgtgtgcgtgtgC----ACAGGC--ATG-CACACACCTGTGTTTA-------------------------------------CATGAACACATATGAATACAGTGTATGTGTACACACACAAACA s panTro5.chr7_NW_015973580v1_random 43547 357 - 83720 GCCCGGGGAGCCTGGTGTCAGCCTCAGTCCGAGCAGCAGAGTCAGCAGGAAGACCCTGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTGTGTTTAGA-TTTTGTCTCTTCCATGTTATTCCCATGGCAGGCTCTGCACCAGTCCCCGGCG-------------------------CTGCCTGCGGCATCTGA---------------------TTCTGCCGGCGCTGCCCGCTTAGCTTATGGGTACGCAGAGGATCTGCATCATGGTTCCTGCTGAAGAAGGGAgtgtgtggctg----tgtgtgtgtg-gctgtgtgtgtgtgtgtgCGC--GCACAGGC--ATG-CACACACCTGTGTTTA-------------------------------------CATGAACACATATGAATACAGTGTATGTGTATACACACAAACA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558171 357 + 162613886 GCCCGGGGAGCCTGGTGTCAGCCTCAGTCCGAGCAGCAGAGTCAGCAGGAAGACCCTGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTGTGTTTAGA-TTTTGTCTCTTCCATGTTATTCCCATGGCAGGCTCTGCACCAGTCCCCGGCG-------------------------CTGCCTGCGGCATCTGA---------------------TTCTGCTGGCGCTGCCCGCTTAGCTTATGGGTACGCAGAGGATCTGCATCATGGTTCCTGCTGAAGAAGGGAgtgtgtggctg----tgtgtgtgtg-gctgtgtgtgtgtgtgtgCAC--GCACAGGC--ATG-CACACACCTGTGTTTA-------------------------------------CATGAACACATATGAATACAGTGTATGTGTATACACACAAACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 129891 358 - 432965 GCCCGGGGAGCCTGGTGTCAGCCCCAGTCCGAGCAGTGGAGTCAGCAGGAAGA-CCTGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTGTGTTTAGA-TTTTGTCTCTTCCGTGTTATTCCCATGGCAGGCTCTGCACCAGTCCCCGGCG-------------------------CTGCCTGCGGCATCTGA---------------------TTCTGCCGGCGCTGTCCGCTTAGCTTATGGGTACGCAGAAGATCTGCATCATGGTTCCTGCTGAAGAAGGGAGTATGTGGCtg----tgtgtgtgtg-gctgtgtgtgtgtgtgtgtgtgtgCACAGGC--ATG-CGCACACCTGTGTTTA-------------------------------------CATGAACACATATGAATACAGTGTATGTGTATACACACAAACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 189211 343 + 85365473 GCCCGGGGAGCCTGGCGTCAGCTCCAGTCCGAGCAGCGGAGCCAGCAGGAAGACTCGGCCCCTGCGAGTGTGTGGG-GTGCTTTAGA-GATGG---GGGTGTGTTTAGA-TTTTGTCTCTTACGTGTTATTCCCATGGCAGGCTCTGCACCAGTCCCCGGCA-------------------------CTGCCTGCGGCATCTGA---------------------TTCTGCCACGGCTGCCCACTTAGCTTTTGGGTACGCAGAAGATCTGCATCGTGGTTCCTGCTGAAGAAGGGAgtgtgtggctg-----------------tgtgtgcgtgtgtgtgtgC----ACAGGC--ATG-CACACACCTGTGTTTA-------------------------------------CACGAACACATATGAATACAGTGTATGTGTATACACACAAACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34036671 337 + 185818997 GCCCGGGGAGCCTGGTGTCAGCTCCAATCCGAGCAGCGGGGCCAGCAGGAAGACCCGGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTGTGTTTAGA-CTTTGTCGCTTACATGTTATTCCCATGGCAGGCTCTGCACCAGT-CCCAGCA-------------------------CTGCCTGCTGCATCTGA---------------------TTCTGCCAGTGCTGCCCACTTAGCTTTTGGGTACATGGAAGTTCTGCATCGTGGTTCCTGCTGAAGAAGGGAgtgtgtggctg---------------------tgtatgtgtgtgtgC----ACAGGC--ATG-CACACACCTGTGTTTA-------------------------------------CGTGAACACATATGAGCA-AGTGCATGTGTATACGCATGAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33652622 337 + 192294377 GCCCGGGGAGCCTGGTGTCAGCTCCAATCCGAGCAGCGGGGCCAGCAGGAAGACCCGGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTGTGTTTAGA-CTTTGTCGCTTACATGTTATTACCATGGCAGGCTCTGCACCAGT-CCCAGCA-------------------------CTGCCTGCTGCATCTGA---------------------TTCTGCCAGTGCTGCCCACTTAGCTTTTGGGTACATGGAAGTTCTGCATCGTGGTTCCTGCTGAAGAAGGGAgtgtgtggctg---------------------tgtatgtgtgtgtgC----ACAGGC--ATG-CACACACCTGTGTTTA-------------------------------------CGTGAACACATATGAGCA-AGTGCATGTGTATACGCATGAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4420318 337 - 9440265 GCCCGGGGAGCCTGGTGTCAGCTCCAATCCGAGCATCGGGGCCAGCAGGAAGACCCGGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTGTGTTTAGA-CTTTGTCGCTTACATGTTATTCTCATGGCAGGCTCTGCACCAGT-CCCGGCA-------------------------CTGCCTGCGGCATCTGA---------------------TTCTGCCAGTGCTGCCCACTTAGCTTTTGGGTACATGGAAGTTCTGCATCGTGGTTCCTGCTGAAGAAGGGAgtgtgtggctg---------------------tgtatgtgtgtgtgC----ACAGGC--ATG-CACACACCTGTGTTTA-------------------------------------CGTGAACACATATGAGCA-AGTGCATGTGTATACGCATGAACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17010245 337 - 21915920 GCCCAGGGAGCCTGGTGTCAGCTCCAATCCGAGCAGCGGGGCCAGCAGGAAGACCCGGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTGTGTTTAGA-CTTTGTCTCTTACATGTTATTCCCATGGCAGGCTCTGCACCAGT-CCCGGCA-------------------------CTGCCTGCGGCATCTGA---------------------TTCTGCCAGTGCTGCCCACTTAGCTTTTGGGTACATGGAAGTTCTGCATCGTGGTTCCTGCTGAAGAAGGGAgtgtgtggctg---------------------tgtatgtgtgtgtgC----ACAGGC--ATG-CACACACCTGTGTTTA-------------------------------------CGTGAACACATATGAGCA-AGTGCATGTGTATATGCATGAACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 142610 334 - 21531802 GCCCGGGGAGCCTGGTGTCAGCTCCAATCCGAGCAGCGGGGCCAGCAGGAAGACCCGGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GGTGG---GGGTGTGTTCAGA-CTTTGCGTCTTACATGTTATTCCCATGGCAGGCTCTGCACCAGT-CCCAGCA-------------------------CTGCCTGCGGCATCTGA---------------------TTCTGCCAGTGCTGCCCACTCAGCCTTT-GGTACATGGAAGTTCTGCATCGTGGTTCCTGCTGAAGAAGGGAGTGTGTGGCTG---------------------TGTATGTGTGTGCAC----ACAGGC--ACG-CACACACCCGTGTTTA-------------------------------------CATGAACAc--atgagca-agtgcatgtgtatacgcacgaaca i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 177085 337 - 2515279 GCCCGGGGAGCCTGGTGTCAGCTCCAATCCGAGCAGCGGGGCCAGCAGGAAGACCCGGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTATGTTTAAA-CTTTGTCTCTTACATGTTATTCCCATGGCAGGCTCTGCACCAGT-CCCGGCA-------------------------CTGCCTGCGGCATCTGA---------------------TTCTGCCAGTGCTGCCCACTTAGCTTTTGGGTACATGGAAGTTCTGCATCGTGGTTCCTGCTGAAGAAGGGAgtgtgtggctg---------------------tgtatgtgtgtgtgC----ACAGGC--ATG-CACACACCTGTGTTTA-------------------------------------CGTGAACACATATGAGCA-AGTGCATGTGTATACGCATGAACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 334829 339 + 6586416 GCCCGGGGAGCCTGGTGTCAGCTCCAATCTGAGCAGCGGAGCCAGCGGGAAGACCCGGCCTCTGTGAGTGTGTGGG-GTGCTTTGGA-GATGG---GGGTGTGTTTAGA-CTTTGTCTCTTACATGTTATTCCCATGGCAGGCTCTGCACCAGT-CCCGGCA-------------------------CTGCCTGTGGCATCTGA---------------------TTCTGCCAGGGTTGCCCACTTAGCTTTTGGGTACATGGAAGGTCTGCATCGTGGTTCCTGCTGAAGAAGGGAGTGTGTGGCTG---------------------TGCATGTGTGTGTGC----ACAGGCATATG-CACACGCCTGTGTTTA-------------------------------------CATGAACACATATGAGCA-AGTGCATGTGTATACGCACGAACA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 65472 335 + 138751 ACCAA-GGAGCCTGGTGTCAGC-CCAATCTGAGCAGCAGAGCCAGCAGGAAAACCGGGCCTCTGTGAGTGTGTGGG-GTGCTTTGCA-GGCGG---GGGTGTGTTTAAA-TTTTGTCTCTTACATGTTACTCCCACGGCAGGTCCTGCATCAGT-CCTGGCA-------------------------CTGCCTGTGATGTCTGA---------------------TTCTGCCAGTGCTGCCCACTTCAC-TTTGGGTACACATAAGATTTGCATTGTGGTTCTTGCTGAAGATGGCAGTGTGTGACTG---------------------TGTATATGTGTGTCC----ACAGGC--ATG-CACGCACCTGTGTTTA-------------------------------------catgaacacacatgaatacagtgcatgtatatacacacaaaca i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 379632 373 - 2409723 GCCCA-GGAGCCTAGTGTCAGC-CCAATCTGAGCAACAGAGCCAGCAGGAAAACTGGGCCTCTGTGAGTGTGTGGG-GTGCCTTGCA-GGCGG---GGGTGTGTTTAAA-TTTTGTCTCTTACATGTTACTCCCACAGCTGGTCCTGCACCAGT-CCTGGCA-------------------------CTGCCTGTGACGTCTGA---------------------TTCTGCCAGGGCTGCCCACTTCACTTTTGGGTACACAGAAGATTTGCATCATGGTTCTTGCTGAAGACGGCGGTGTGTGGCTG---------------------TGTATATGTGTGTCC----ACAGGC--ATG-CACGCACCTGTGTTtacatacctgtgtatatacacgcactgtattcatgtgtgcatgaacacacatgaatacagtgcgtgtatatacacacaaaca i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 541559 333 - 2125214 GCCC----AGCCTAGTGTCAGC-TCAATCTGAGCAACAGAGCCAGCAGGAAAACCGGGCTTCTGTGAGTGTGTGGG-GTGCTTTGCA-GGCAG---GGGTGTGTTTAAA-TTTTGTCTCTTACATGTTACTCCCACGGCAGGTCCTGCACCAGT-CCTGGCA-------------------------CTGCCTGTGACATCTGA---------------------TTCTGCCAGTGCTGCCCACTTCGCTTTTGGGTACACAGAAGATTTGCATCATGGTTCTTGCTGAAGACAGCAgtgtgtggctg---------------------tgtatgtgtgtgtCC----ACAGGC--ATG-CACGCACCTATGTTTA-------------------------------------CATGAACACACATGAATAAAGtgcatgtacatacacacaaaca i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 126691 326 + 376347 GCCCA-GGA-CCTGGTGTCAGC-CCAATGTGAGCAACAGAGCCAGCAGGAAAACCAGGCCTCTGTGACTGTGCCGG-GTGCTTTGCAGGGCGG---GGGTGTGTTTAAA-TTTTGTCTCTTACATGTTACTCCCACGGCAGGTCCTGCACCAGC-CCTGGCA-------------------------CCGCCTGTGATGTCTGA---------------------TTCTGCCAGTGCCGCCCACTTCACTTTTGGGTCCACAGAAGATTTGCATCGTGGTTCTTGCTGAAGACGGCAgtgtgtggctg---------------------tgtatgtgtgtgtCC----ACAGGC--ATG-----------TGTTTA-------------------------------------CATGAGCACACATGAATACAGTGCATGTATACACACACACACA i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61058477 390 - 77573801 ----GGGGAGCGTGG-----------ATCCATGCAGGAGGGCAGGTGGGAAACCCTGGCCTGAGGGAATGCATGGGTATGTTTTGGA-GATGGGATGGGCATATTTAACTTTTTGTCGTTTATAAATTACT-CCAAGGCAGGTTCTGGATCAGT-CCCAGGAGCGATGGGACAATGGCTGATTGCACCTATCTGCTGTGACCAAGGGGGCATTTTGGCATGGGTGTTCCCCCCGTCCTGCCTCCTTAACTTTTGCATA-ATTCAAGATTCACAGTGTGGTTCCTGCTAAAGTGAAGAGGGTGCATATGTACTTGTGTGTGTGTGTTGAGTGTGTGTAAATGTGC----GCATGC--ACGTCCCACATATTTGCCTG-------------------------------------CGTGCACCTGTATGTATC----ACATGTGCATACACAGAAACA i canFam3.chr6 C 0 I 13 e otoGar3.GL873611 2272524 0 - 8137123 C a score=10035.000000 s hg38.chr7_KI270899v1_alt 168460 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 43904 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558528 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130249 1 - 432965 T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 189554 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037008 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33652959 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4420655 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17010582 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 142944 1 - 21531802 c i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 177422 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 335168 1 + 6586416 C i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 65807 1 + 138751 c i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 380005 1 - 2409723 c i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 541892 1 - 2125214 c i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 127017 1 + 376347 C i aotNan1.NW_018514293v1 C 0 I 129 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61058867 13 - 77573801 I a score=355835.000000 s hg38.chr7_KI270899v1_alt 168461 59 + 190869 --GTGtgtgcatgtgaggtacatgcatgtgcacatttgcttacatgtacgtg-----------------tgtgtgtgc s panTro5.chr7_NW_015973580v1_random 43905 59 - 83720 --GTGtgtgcatgtgaggtacatgcatgtgcacatttgcttacatgtacatg-----------------tgtgtgtgc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558529 59 + 162613886 --GTGtgtgcatgtgaggtacatgcatgtgcacatttgcttacatgtacatg-----------------tgtgtgcgc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130250 59 - 432965 --GTGTGTGCATGTGAGGTACATGCATGTGCACATTTGCTTACATGTACATG-----------------TGTGTGCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 189555 46 + 85365473 --GTGtgtgcatgtgaggtacatgcaggtgcacattcacttacatgtg------------------------------ i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037009 58 + 185818997 --GTGTGTGCAC-TGAGGTACATGCATGTGTGCATTCACCTACACGTACATG-----------------TGTGTGTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33652960 58 + 192294377 --GTGTGTGCAC-TGAGGTACATGCATGTGTGCATTCGCCTACACGTACATG-----------------TGTGTGTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4420656 58 - 9440265 --ATGTGTGCAC-TGAGGTACATGCATGTGTGCATTCGCCTATACGTACATG-----------------TGTGTGTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17010583 58 - 21915920 --GTGTGTGCAC-TGAGGTACATGCATGTGTGCATTCGCCTACACGTACGTG-----------------TGTGTGTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 142945 58 - 21531802 --gtgtgtgcac-tgaggtacatgcatgtgcGCATTCGCCTACACGTACGTG-----------------TGTGTGTGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 177423 58 - 2515279 --GTGTGTGCAC-TGAGGTACATGCATGTGTGCATTCGCCTACACGTACGTG-----------------TGTGTGTGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 335169 57 + 6586416 --GTGTGTGCCC-TGAGGTACATGCATGTGCGCATTTGCCTACATGGACCTG-----------------TGCGTGTG- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 65808 52 + 138751 ataaatgtgcttgtgaggtacatacacatgcacattagcctacatgtatatg-------------------------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 380006 52 - 2409723 atacatgtgcatgtgaggtacatacacacgcacattagcctacatgtacatg-------------------------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 541893 78 - 2125214 atacatgtgcatgtgaggtacatatacatgcacattagcccatatgtacatgcacacatgtgattggtatgtgtgtgc i cebCap1.NW_016107703v1 C 0 I 90 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61058867 13 - 77573801 I e aotNan1.NW_018514293v1 127018 129 + 376347 I a score=209242.000000 s hg38.chr7_KI270899v1_alt 168520 44 + 190869 acgtgcatacacatgtgcgattggcaagtgtg--tgc----a-----tgcatatg s panTro5.chr7_NW_015973580v1_random 43964 46 - 83720 acgtgcatacacatgtgcgattggcatgtgtgcatgc----a-----tgcatatg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558588 46 + 162613886 acgtgcatacacatgtgcgattggcatgtgtgcatgc----a-----tgcatatg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130309 49 - 432965 ATGTG--TACACATGTGCGATTGGCATGTGTGTGTGC----ATGCATTGCATATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 189601 39 + 85365473 -------tgcacatgtgcgattggcatgcgtgcatgt----a-----tgcatatg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037067 43 + 185818997 ACGTGG-TACACATGTGCGATTGGCAAGCGTG--TGC----A-----CACATATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33653018 43 + 192294377 ACGTGG-TACACATGTGCGATTGGCAAGCGTG--TGC----A-----CACATATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4420714 43 - 9440265 ACGTGG-CACACATGTGCGACTGGCAAGCGTG--TGC----A-----CACATATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17010641 43 - 21915920 ACGTGG-TACACATGTGCGATTGGCAAGCGTG--TGC----A-----CACATATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 143003 43 - 21531802 ACATGG-CACACATATGCAACTGGCAAGCGTG--CGC----A-----CACATATG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 177481 43 - 2515279 ACGTGG-TACACATGTGCGATTGGCAAGCGTG--TGC----A-----CACATATG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 335226 38 + 6586416 ---TGG-TACAC--GTGCAATTGGCAAGTATG--TGC----A-----CACATATG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 65860 39 + 138751 ---------cacatatgtgattggcatgtgtg--tgcatgaa-----tgcatatg i calJac3.chrUn_GL286444 C 0 I 73 s saiBol1.JH378296 380058 35 - 2409723 ---------cacacacgtgattgacacgtatg--tgc----a-----tgcatatg i saiBol1.JH378296 C 0 I 51 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61058867 13 - 77573801 I e aotNan1.NW_018514293v1 127018 129 + 376347 I e cebCap1.NW_016107703v1 541971 90 - 2125214 I a score=72426.000000 s hg38.chr7_KI270899v1_alt 168564 10 + 190869 tatatgggca s panTro5.chr7_NW_015973580v1_random 44010 10 - 83720 tatatgggca i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558634 10 + 162613886 tatatgggca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130358 10 - 432965 TATATGGGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 189640 10 + 85365473 tatatgggca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037110 10 + 185818997 TATATGGGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33653061 10 + 192294377 TATATGGGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4420757 10 - 9440265 TATATGGGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17010684 10 - 21915920 TATATGGGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 143046 10 - 21531802 TCTATGGGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 177524 10 - 2515279 TATATGGGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 335264 10 + 6586416 TATATGGGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 65972 10 + 138751 tgcatgtgtg i calJac3.chrUn_GL286444 I 73 C 0 s saiBol1.JH378296 380144 10 - 2409723 tgcatgtgtg i saiBol1.JH378296 I 51 C 0 s cebCap1.NW_016107703v1 542061 10 - 2125214 tgcatgtgta i cebCap1.NW_016107703v1 I 90 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61058867 13 - 77573801 I e aotNan1.NW_018514293v1 127018 129 + 376347 I a score=190177.000000 s hg38.chr7_KI270899v1_alt 168574 30 + 190869 catatatgtaca---ggcatg-tATGCACGTT-------------------------------------------------------------TG s panTro5.chr7_NW_015973580v1_random 44020 30 - 83720 catatatgtaca---ggcacg-tatgcacgtt-------------------------------------------------------------tg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558644 30 + 162613886 catatatgtaca---ggcacg-tatgcacgtt-------------------------------------------------------------tg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130368 35 - 432965 CATATATATGTACAGGGCACGTTATGCACGTTC------------------------------------------------------------TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 189650 91 + 85365473 catatatgtaca---ggcaca-catgcacgtttgtgtgtgcatgcatattatatgaacacacatgtgcatgcatgtacaggcacgtgtgcatgtg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037120 30 + 185818997 CATGTATATGCA---GGCATG-TATGCACGTT-------------------------------------------------------------TG i rheMac8.chr3 C 0 I 97 s macFas5.chr3 33653071 30 + 192294377 CATGTATATGCA---GGCATG-TATGCACGTT-------------------------------------------------------------TG i macFas5.chr3 C 0 I 97 s macNem1.NW_012019910v1 4420767 30 - 9440265 CATGTATATGCA---GGCATG-TATGCACGTT-------------------------------------------------------------TG i macNem1.NW_012019910v1 C 0 I 97 s cerAty1.NW_012002954v1 17010694 30 - 21915920 CATGTATATGCA---GGCATG-TATGCACGTT-------------------------------------------------------------TG i cerAty1.NW_012002954v1 C 0 I 97 s chlSab2.chr28 143056 30 - 21531802 CATGTATGTGCA---GGCATG-TATGCACGTT-------------------------------------------------------------TG i chlSab2.chr28 C 0 I 117 s manLeu1.NW_012101810v1 177534 30 - 2515279 CATGTATATGCA---GGCATG-TATGCACGTT-------------------------------------------------------------TG i manLeu1.NW_012101810v1 C 0 I 97 s colAng1.NW_012117710v1 335274 30 + 6586416 Catgtatgtgca---ggcatg-tatgcacgtt-------------------------------------------------------------tg i colAng1.NW_012117710v1 C 0 I 97 s calJac3.chrUn_GL286444 65982 28 + 138751 catgaatgtaca---ggcatg-tatgcacatg--------------------------------------------------------------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 380154 28 - 2409723 catgtatgtaca---ggcgtg-tatgcacatg--------------------------------------------------------------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 542071 28 - 2125214 catgtatgtata---ggcatg-tgTGCACATG--------------------------------------------------------------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 127147 28 + 376347 CCTGTATGTACA---GGGATG-TATGCACACG--------------------------------------------------------------- i aotNan1.NW_018514293v1 I 129 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61058867 13 - 77573801 I a score=170861.000000 s hg38.chr7_KI270899v1_alt 168604 23 + 190869 TGTGTTTGGTGTGTCTATATATG s panTro5.chr7_NW_015973580v1_random 44050 23 - 83720 tgtgtttggtgtgtatatatatg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558674 23 + 162613886 tgtgtttggtgtgtctatatatg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130403 23 - 432965 TGTGTTTGGTGTGTCTATATATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 189741 23 + 85365473 TGTGTTTGGTGTGTCTATATATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037247 23 + 185818997 TGTGTTTGGCGTGTGCGTATTTG i rheMac8.chr3 I 97 I 1 s macFas5.chr3 33653198 23 + 192294377 TGTGTTTGGCGTGTGCGTATTTG i macFas5.chr3 I 97 I 1 s macNem1.NW_012019910v1 4420894 22 - 9440265 TGTGTTTGGCGTGTGCGTA-TTG i macNem1.NW_012019910v1 I 97 I 1 s cerAty1.NW_012002954v1 17010821 23 - 21915920 TGTGTTTGGCGTGTGCGTATTTG i cerAty1.NW_012002954v1 I 97 I 1 s manLeu1.NW_012101810v1 177661 23 - 2515279 tgtgtttggcgtgtgtgtatttg i manLeu1.NW_012101810v1 I 97 I 1 s colAng1.NW_012117710v1 335401 23 + 6586416 tgtgtttggcatgtgcatatgtg i colAng1.NW_012117710v1 I 97 I 1 s calJac3.chrUn_GL286444 66010 23 + 138751 tgtgtttggtgtgtgcatagctg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 380182 23 - 2409723 tgtgtttggtgtgtgcatatctg i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 542099 23 - 2125214 TGTGTTTGGTGTGTGCATATCTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 127175 23 + 376347 TGTGTTTGGTGTGTGCGTATCTG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61058867 13 - 77573801 I e chlSab2.chr28 143086 117 - 21531802 I a score=347015.000000 s hg38.chr7_KI270899v1_alt 168627 44 + 190869 TACGTGTATATGGCCACACAC--GGATACAGGTATGTATACACCTG s panTro5.chr7_NW_015973580v1_random 44073 46 - 83720 tacgtgtatatgGCCACACACATGGATACAGGTATGTATACACCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558697 46 + 162613886 tacgtgtatatgGCCACACACATGGATACAGGTATGTATACACCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130426 46 - 432965 TACGTGTATATGGCCACACACATGGATACAGGTATGTATACACATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 189764 46 + 85365473 TACATGTATATGGCCACACACATGGATACAGGTATGTGTACACCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037271 44 + 185818997 TACGTATATGTGGCCACACAC--GGATACAGGTATGTGTACACACG i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33653222 44 + 192294377 TACGTATATGTGGCCACACAC--GGATACAGGTATGTGTACACACG i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4420917 44 - 9440265 TACGTATATGTGGCCACACAC--GGATACAGGTATGTGTACACACG i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 17010845 44 - 21915920 TACGTATATGTGGCCACACAC--AGATACAGGTATGTGTACACACG i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 143203 44 - 21531802 TACGTGTATATGGCCACACAC--AGATACAGGTATGTGTACACAGG i chlSab2.chr28 I 117 C 0 s manLeu1.NW_012101810v1 177685 44 - 2515279 TACGTATATGTGGCCACACAC--AGATACAGGTATGTGTACACACG i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 335425 44 + 6586416 tacgtgtatatgGCCACACAC--GGATACAGGTATATGTATACATG i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chrUn_GL286444 66033 42 + 138751 ----tgtgtatgagcacacacatggatacaggcatgcatacatgtg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 380205 42 - 2409723 ----tgtgtacgggcacacacatggatacaggcatgtgtccacatg i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 542122 42 - 2125214 ----TGTGTATGGGCACACACATGGATACAGGTATGTGTACATGTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 127198 38 + 376347 ----TGTATGGG----CACACATGGATACAGGCACGTGTACATGTG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61058867 13 - 77573801 I a score=1825128.000000 s hg38.chr7_KI270899v1_alt 168671 201 + 190869 TGCATGCACGCTTGCCCAGACACACAACTGCACACCTCCCTGCCCTGCA--CCCTGCCTTTGGGCTCTCCATCGTTGCTGCTGGCTGATAGGTCTTG-AAAGGCCCAGG--CT--GGTGAGTAAGTCCTGCCCCTCAGGTGGGCAA------------------GAC-TGGGAACAGCCT-----ATCT-GGCCTTCTTCAGGTTTCCTCTCTCAGCCTGGAGGAGGGCAATA s panTro5.chr7_NW_015973580v1_random 44119 201 - 83720 TGCATGCACGCTTGCCCAGACACACAACTGCACACCTCCCTGCCCTGCA--CCCCGCCTTTGGGCTCTCCATCATTGCTGCTGGCTGATAGGTCTTG-AAAGGCCCAGG--CT--GGTGGGTAAGTCCTGCCCCTCAGGTGGGCAG------------------GAG-TGGGAACAGCCT-----ATCT-GGCCTTCTCCAGGTTTCCTCTCTCAGCCTGGAGGAGGGCAATA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558743 201 + 162613886 TGCATGCACGCTTGCCCAGACACACAACTGCACACCTCCCTGCCCTGCA--CCCCGCCTTTGGGCTCTCCATCATTGCTGCTGGCTGATAGGTCTTG-AAAGGCCCAGG--CT--GGTGGGTAAATCCTGCCCCTCAGGTGGGCAG------------------GAG-TGGGAACAGCCT-----ATCT-GGCCTTCTCCAGGTTTCCTCTCTCAGCCTGGAGGAGGGCAATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130472 200 - 432965 TGCATGCACGCTTGCCCAGACACACAACTGCACACCTCCCTG-CCTGCA--CCCCGCCTTTGGGCTCTCCATCATTGCTGCTGGCTGATAGGTCTTG-AAAGGCCCAGG--CT--GGTGGGTATGTCCTGCCTCTCAGGTGGGCAG------------------GAG-TGGGAACAGCCT-----ATCT-GGCCTTCTCCAGGTTTCCTCTGTCAGCCTGGAGGAGGGCAATA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 189810 202 + 85365473 TGCATGCACACTTGCCCAGACACACAACTGCACACCTCCCTGCCCTCCA--CCCTGCCTTTGGGCTCTCCATCATTGCTGCTGGCTGATAGGTCTTG-AAAGGCCCAGG--CT--GGCGGGCATGTCCTGCTGCTCAGGCGGGCAG------------------AAG-TCGGAACAGCCT-----GTCTGGGCCTTCTCTAGGTTTCCTCTGTCGGCCTGGAGGAGGGCAATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037315 203 + 185818997 TGCATGCACGCTTGCCCAGATACAGACCTGCACGCCTCCCTGCCCTCCA--TCCCGCCTTTGGGGTCTCCATCACCGCTGCTTGTTGATAGGTCTTGAAAAGGTCCAGG--CT--GGCGGGCATGTCCTGCTGCCCAGGTGGGCAG------------------GAG-TGGGAACAGCAT-----ATCTGGGCCTTCTCCAGGTTTCCTCTGTCAGCCCGGAGGAGGGCAATC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33653266 203 + 192294377 TGCATGCACGCTTGCCCAGATACAGACCTGCACGCCTCCCTGCCCTCCA--TCCCGCCTTTGGGGTCTCCATCACCGCTGCTTGTTGATAGGTCTTGAAAAGGTCCAGG--CT--GGCGGGCATGTCCTGCTGCCCAGGTGGGCAG------------------GAG-TGGGAACAGCAT-----ATCTGGGCCTTCTCCAGGTTTCCTCTGTCAGCCCGGAGGAGGGCAATC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4420961 203 - 9440265 TGCATGCACGCTTGCCCAGATACAGACCTGCACGCCTCCCTGCCCTCCA--TCCCGCCTTTGGGGTCTCCATCACCGCTGCTTGTTGATAGGTCTTGAAAAGGTCCAGG--CT--GGCGGGCATGTCCTGCTGCCCAGGTGGGCAG------------------GAG-TGGGAACAGCAT-----ATCTGGGTCTTCTCCAGGTTTCCTCTGTCAGCCCGGAGGAGGGCAATC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17010889 203 - 21915920 TGCATGCACGCTTGCCCAGATACAGACCTACACGCCTCCCTGCCCTCCA--TCCCGCCTTTGGGGTCTCCATCACCACTGCTTGTTGATAGGTCTTGAAAAGGTCCAGG--CT--GGCGGGCATGTCCTGCTGCCCAGGTGGGCAG------------------GAA-TGGGAACAGCAT-----ATCTGGGCCTTCTCCAGGTTTCCTCTGTCAGCCCGGAGGAGGGCAATC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 143247 201 - 21531802 TGCACGCACGCTTGCCCAGACACACACGTGCACACCTCCCTGTCCTCC---CCTCGCCTTTGGGGTCTCCATCACCGCTGCTTGTTGATAGGTCTTGAAAAGGTCCAGG--CT--GGCGGGCATGTCC-GCTGCCCAGGTGGGCAG------------------AAG-TGGGAACAGCGT-----ATCTGGGCCTTCTCCAGATTTCCCCTGTCAGCCCGGAGGAGGGCAATC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 177729 203 - 2515279 TGCACGCATGCTTGCCCAGATACAGACCTGCATGCCTCCCTGCCCTCCA--TCCCGCCTTTGGGGTCTCCATCACCGCTGCTTGTTGATAGGCCTTGAAAAGGTCCAGG--CT--GGCAGGCATGTCCTGCTGCCCAGGTGGGCAG------------------GAG-TGGGAACAGCAT-----ATCTGGGCCTTCTCCAGGTTTCCTCTGTCGGCCCGGAGGAGGGCAATC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 335469 203 + 6586416 TGCATGCACGCTTGCCCAGACACACACCTGCACACCTCCCTGCCCTCCA--TCCCGCCTTTGGGGTCTCCATCACCACTGCTTGCTGATAGGTCTTGAAAAAGCCCAGG--CT--GGTGGGCATGTCCTGCTGCCCAGGTGGGCAG------------------GAG-TGGGAACAGCCT-----ATCTGGGCCTTCTCCAGGTTTCCTCTGTCAGCCCGGGGGAGGGCAATC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66075 203 + 138751 tacatgcaCACTTGTCCAGACACATAACTGCAAACATCCCTTCCCTCA---CCCCGCCTTTGGGCTCTCCATCATTGCTGCTGGCTGATAGGTCTTG-AAACGCCTAGGCTCT--GGTGGGCATGCTCTGCTGCCCAGGTGGGCAG------------------GAG-TGGGAACAGCCT-----ATTGGGGCCTTCTCCAGGTTTCCTCTGTCAGCCTGGAGGAGAGAAATA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 380247 202 - 2409723 tgcatgcacaCTGGCCCAGACACATCACTGCACACATCTCTTCTCTTA----CCTGCCTTTGGGCTCTCCGCCATTGCTGCTGGCTGATAGGTCTTG-AAGGGCCCAGGCTCT--GGTGGGCGTGCTCTGTTGCTCAGGTGGGTAG------------------GAG-TAGGAACAGCCT-----ATTGGGGCCTTCTCCAGGTTTCGTCTGTCAGCCTAGAGGAGGAAAATA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 542164 203 - 2125214 TGCATGCACACTTGCCCAGACACATAACTGCACACATCCCTTCTCTCA----CCTGCCTTTGGGCTCTCCGTCATTGCTGCTGGCTGATAGGTCTTG-AAAGGCCCAGGCTCT--GGTGGGCATGCTTTGCTGCTCAGGTGGGTAG------------------GAGTTGGGAACAGCCT-----ATTGGGGCCTTCTCCAGGTTTCCTCTGCCAGCCTAGAGGAGGAAAATA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 127236 202 + 376347 TGCGTGCACACTCGCCCAGACACGTAGCTGCACACATCCCTTCTCTCA----CCTGCCTTTGGGCTCTCCGTCATTGCTGCGGGCTGATAGGTCTTG-AAAGGCCCAGGCTCT--GGCGGTCGTGCTCTGCTGCTCAGGTGGGCAG------------------GAG-TGGGAACAGCCT-----ACTGGGGCCTTCTCCAGGTTCCCTCTGTCAGCCTAGAGGAGGGAAATT i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61058880 227 - 77573801 TGTGTGTGGACCTGTCCAGATACTCAGCTGCAC---TCTCTGCTCTGAGTCCCCCTCCGCTGGGCCCCCCATAGTTGACAGCTGGGGGTAAGTCTTGCTGAGGCCCAGG--CTGCGGCAGGTACATCCTGCCACCAGGACAGAGTGGCTTTCTGAGTCCTTACTGAA-TAGGAACTACACCTCCGATCTGGGGATTCTCAGGTTTTCCTCTGTCAGCCAGGACGATGACAATA i canFam3.chr6 I 13 I 1 e otoGar3.GL873611 2272524 0 - 8137123 C a score=10920.000000 s hg38.chr7_KI270899v1_alt 168872 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 44320 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558944 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130672 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 190012 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037518 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33653469 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4421164 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17011092 1 - 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 143448 1 - 21531802 A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 177932 1 - 2515279 A i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 335672 1 + 6586416 A i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66278 1 + 138751 A i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 380449 1 - 2409723 A i saiBol1.JH378296 C 0 I 302 s cebCap1.NW_016107703v1 542367 1 - 2125214 A i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 127438 1 + 376347 A i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059107 1 - 77573801 I a score=2112772.000000 s hg38.chr7_KI270899v1_alt 168873 263 + 190869 TGATGCAATTTCTTACAATAATGATACCTTACATTGCATAATCGTTC-GGGTCACTCAAAATATTGAAAACAGTAGCACAGAAAGGTTAA-----------AGGGTT--------CCACAGCAACTCAGCAGCACAGCCAGCACCACGAAGTCGGCCACCGCCCCACACTTTAG----TCAGTTGGGTGACCTGGCCGGCCCTGG-GAGGACGCCTCATTCAGCTGAAGCTCATCCACATCCACGTCAGGGGGCTCCTTGGTGTCCCGGAGATGCTGCCAGCTCCCAG s panTro5.chr7_NW_015973580v1_random 44321 263 - 83720 TGATGCAATTTCTTACAATAATGATACCTTACATTGCATAATCGTTC-GGGTCACTCAAAATATTGAAAACAGTAGCACAGAAAGGTTGA-----------AGGGTT--------CCACAGCAACTCAGCAGCACAGCCAGCACCACGAAGTCGGCCACCGCCCCACACTTTAG----TCAGTTGGGTGACCTGGCCAGCCCTGG-GAGGACCCCTCATTCAGCTGAAGCTCATCCACATCCACGTCAGGGGGCTCCTCGGTGTCCAGGAGATGCTGCCAGCTCCCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 558945 264 + 162613886 TGATGCAATTTCTTACAATAATGATACCTTACATTGCATAATCTTTCAGGGTCACTCAAAATATTGAAAACAGTAGCACAGAAAGGTTGA-----------AGGGTT--------CCACAGCAACTCAGCAGCACAGCCAGCACCACGAAGTCGGCCACCGCCCCACACTTTAG----TCAGTTGGGTGACCTGGCCAGCCCTGG-GAGGACCCCTCATTCAGCTGAAGCTCATCCACATCCACGTCAGGGGGCTCCTCGGTGTCCAGGAGATGCTGCCAGCTCCCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130673 261 - 432965 TGATGCAATTTCTTACAATAATGATACCTTACATTGCATAATCGCTC-GGGTCACTCAAAATATTGAAAACAGTAGCACAGAAAGGTTAA-----------AGGGTT--------CCACAGCAACTCAGCAGCATAGCCAGCACCACGAAGTCGGCCACCGCCCCACACTTTAG----TCAGTTGGGTGACCTGG-CGGCCCTGG-GAGGACGCCTCATTCAGCTGAAGCTCATCCA-ATCCACGTCAGGGGGCTCCTCGGTGTCCAGGAGATGCCGCCAGCTCCCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 190013 263 + 85365473 TGATGCAATTTCTTACAATAATGATACCTTACACTGCATAATCGTTC-GTGTCACTCAAAATGTTGAAAACAGTAGCACAGAAAGGTTAA-----------AGGGTT--------CCACAGCAACTCAGCAGCACAGCCAGCACCACGAAGTCGGCCACCGCCCCACACTTTAG----TCAGCTGGGTGACCTGGCCGGCCCTGG-GAGGACGCCTCATTCAGCTGAAGCTCATCCACATCCACGTCAGGGGGCTCCTCGGTGTCCAGGAGATGCTGCCAGCTCCCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037519 252 + 185818997 CGACGCAATTTCTTACAATAATGATACCTCACATTGCATAATCGTTC-ATGTCCTTCAAAATATTGAAAATCGTAGCACAGAAAGTTTGA-----------AGGGTT--------CCACAGCAACT------------CAGCACCACGAAGTCAGCCACGGCCCCACACGTCGACGGCTCAGTTGGGTGACATGGCCGGCCCCGG---GGACACCTCTTTCTGCTGACGTTCATCCACATCCACATCC-AGAGCTTCTCGGTGTCCAGGAGATGCTGCCAGCTCCTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33653470 252 + 192294377 CGACGCAATTTCTTACAATAATGATACCTCACATTGCATAATCGTTC-ATGTCCTTCAAAATATTGAAAATCGTAGCACAGAAAGTTTGA-----------AGGGTT--------CCACAGCAACT------------CAGCACCACGAAGTCAGCCACGGCCCCACACGTCGACGGCTCAGTTGGGTGACATGGCCGGCCCCGG---GGACACCTCTTTCTGCTGACGTTCATCCACATCCACATCC-AGAGCTTCTCGGTGTCCAGGAGATGCTGCCAGCTCCTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4421165 252 - 9440265 CGACGCAATTTCTTACAATAATGATACCTCACATTGCATAATCGTTC-ACGTCCTTCAAAATATTGAAAATCGTAGCACAGAAAGTTTGA-----------AGGGTT--------CCACAGCAACT------------CAGCACCACGAAGTCAGCCACGGCCCCACACGTCGACGGCTCAGTTGGGTGACGTGGCCGGCCCCGG---GGACTCCTCTTTCTGCTGACGTTCATCCACATCCACATCC-AGAGCTTCTCGGTGTCCAGGAGATGCTGACAGCTCCTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17011093 252 - 21915920 CGACGCAATTTCTTACAATAATGATACCTCACATTGCATAATCGTTC-ATGTCCTTCAAAATATTGAAAATCGTAGCACAGAAGGTTTGG-----------AGGGTT--------CCACAGCAACT------------CAGCACCACGAAGTCGGCCACGGCCCCACACGTCGACGGCTCGGTTGGGTGACGTGGCCGGCCCCGG---GGACGCCTCTTTCTGCTGACGTTCATCCACATCCACATCC-AGAGCTTCTCGGTGTCCAGGAGATGCTGCCAGCTCCTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 143449 254 - 21531802 CGACGCAATTTCTTACAACAATGATACCTCACATTGCATGATCGTTC-ATGTCCTTCAAAATGTTGAAAATCGTAGCACAGAAAGGTTGG-----------AGGGTT--------CCACAGTGACT------------CATCACCACGAAGTCGGCCACGGCCCCACACGTCGATGGCTCGGTTGGGTGACATGGCCGGCCCCGG-GAGGACACCTCTTTCTGCTGACGCTCATCCACATCCATGTCC-AGAGCTTCTTGGTGTCCAGGAGATGCTGCCAGCTCCCGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 177933 252 - 2515279 CGACGCAATTTCTTACAATAATGATACCTCACATTGCATAATCGTTC-ATGTCCTTCAAAATATTGAAAATCGTAGCACAGAAAGTTTGG-----------AGGGTT--------CCACAGCAACT------------CAGCACCACGAAGTCGGCCACGGCCCCACACGTCGACAGCTCGGTTGGGTGACGTGGCCGGCCCCGG---GGACGCCTCTTTCTGCTGACGTTCATCCACATCCACATCC-AGAGCTTCTCGGTGTCCAGGAGATGCTGCCAGCTCCTGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 335673 255 + 6586416 TGATGCAATTTCTTACAATAATGATACCTCACATTGCATAATCGTTC-GTGTCATTCAAAATATTGAAAATCGTAGCACAGAAAGGTTGG-----------AGGATT--------CCACAGCACCT------------CAGCACCACGAAGTCGGCCACGGCCCTACACGTCGACGGGTCACTTGAGTGACCTGGCCGGCCCCGGGGAGGACGCCTCTTTCTGCTGAAACTCATCCACATCCATGTCC-AGAGCTTCTTAGTGTCCAGGAGATGCTGCCAGCTCCCGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66279 286 + 138751 TGATGCAATTTCTTACAGTAATGATACCTTACACTGCATAATTGT-T-GTGtcattcaaaatattggaaatagtagcacagagaggttaactgacttacccagggttgctcagcagctcagcagctcagcagctcagcCAGCACCACAAAGTCGGCCACCGCCCCATAGTTTTGCTGGTCAGTTGGGTGACCTGGCTGGCCCAGGGGAGGATGCCTCACTCTGCTGAAACCCATCCACATCCATGTCAGGGAGCTTCTCATTGTCCAGGAGATGCTGCAAGCCCCCAG i calJac3.chrUn_GL286444 C 0 I 11 s saiBol1.JH378296 380752 278 - 2409723 TGATGCAATTTCTTACAGTAATGATACCTTGCATTGCATAATTGC-C-ATGtcattcaaaatattggaaatagtagcacagagaggttaactgacttacctagggtt--------gctcagcagctcagcagctcagccggcaccacaaAGTCGGCCACCACCCCACAGTTTTGCTGGTCAGTTGGGTGACCTGTTTGGCCCGGGGCAGGATGCCTCACTCTGCTGAAGCCCATCCACATCCATGTCAGGAAGATTCTCGCTGTCCAGGAGATGCTGCCGGCTCCCAG i saiBol1.JH378296 I 302 C 0 s cebCap1.NW_016107703v1 542368 278 - 2125214 TGATGCAATTTCTTACAGTAATGATACCTTACACTACATAATTGC-C-GTGtcattcaaaatattggaaatagtagcacagagaggttaactgacttacctagggtt--------gctcagcagctcagcagctcagccagcaccacaaAGTTGGCCACTGCCCCACAGTTTTACCGGTCAGCTGGGTGACCTGGCCGGCCCAGGGGAGGACATCTCACTCTGCTGAAGCCCATCCACATCCATGTTAGGGAGCTTCTCGCTGTCCAGGAGATGCTGCCAGCTCCTAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 127439 275 + 376347 TGATGCAATTTCTTACAGTAATGATACCTTATGTTGCGTAATTGC-C-GTGccattcaaaatatgggaaatagtagcacagagaggttaactgacttccctagggtt--------gct---cagcccggcagctcagccagCACCACAAAGTCGGCCACCGCCCCACAGTTTTGCTGGTCAGTTGGGTGACCTGGCCGGCCCAGGGGAGGACGCCTCACTCTGCTGAAGCCCATCCACATCCATGTCAGGGAGCTTCTCGCTGTCCAGGAGATGCTGCCGGCTCTTGG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059107 1 - 77573801 I a score=237628.000000 s hg38.chr7_KI270899v1_alt 169136 31 + 190869 CCCCAGGAC-GGGTGTGAGGCTGTGGCCCAC--G s panTro5.chr7_NW_015973580v1_random 44584 31 - 83720 CCCCAGGAC-GGGTGTGAGGCTGTGGCCCCC--G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 559209 31 + 162613886 CCCCAGGAC-GGGTGTGAGGCTGTGGCCCCT--G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130934 31 - 432965 CCCCAGGAC-GGGTGTGAGGCTGTGGTCCCC--G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 190276 31 + 85365473 CCCCAGGAC-GGGTGTGAGGCTGTGGCCCCC--G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037771 30 + 185818997 CCCCAGGAT-GGGTGTGAGGCTGTGGCCC-C--G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33653722 30 + 192294377 CCCCAGGAT-GGGTGTGAGGCTGTGGCCC-T--G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4421417 30 - 9440265 CCCCAGGAT-GGGTGTGAGGCTGTGGCCC-C--G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17011345 30 - 21915920 CCCCAGGAT-GGGTGTGAGGCTGTGGCCC-C--G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 143703 30 - 21531802 CCCCAGGAC-GAGTGTGAGGCTGTGGCCC-C--A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 178185 30 - 2515279 CCCCAGGAT-GGGTGTGAGGCTGTGGCCC-C--G i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 335928 30 + 6586416 CCCCAGGAC-GAGTGTGAGGCTGTGGCCC-C--G i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 381030 34 - 2409723 CCCCACGATGGGGTGTGAGGCTGTGACCCCCCGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 542646 32 - 2125214 TCCCAGGACGGGGTGTGAGACTGTGGCCCCC--G i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 127714 32 + 376347 CCCCAGGACGGGGTGTGAGGCTGTGGCCCCC--G i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059107 1 - 77573801 I e calJac3.chrUn_GL286444 66565 11 + 138751 I a score=2426152.000000 s hg38.chr7_KI270899v1_alt 169167 309 + 190869 GGG----------------TAGGTCCCACCAGGGTCTGAAACAGTT----CCCTGAGGTGCAGG----GAGGTGGGAGGCAGTGA---ATCCTGCTTTGAAAACTGACTTCAGCTGTTCAGGGTGGGTGGGGC---------------GTGGGCT--------CAGGGGTGCAGCTGACGCGTAGGTTGGCTCCAGCTATCACCCCAGATCTGGTCCATCCGCAACAGCA-----------------------GCCTTGCGTGTGGGCTGAGCAGTTGGTTGGCCACATCCAAGCTCTGTTGGGAAAAGAAA----------TCCACTGGTGCCTGTGGTAGGAAACCAGTGCCTCATCCTTGGGCCGGATCAGGTGATCT--------------------GAGGGGTGGGA s panTro5.chr7_NW_015973580v1_random 44615 303 - 83720 GGG----------------TAGGTCCCACCAGGGTCTGAAACAGTT----CCCTGAGGTGCAGG----GAGGTGGGAGGCAGTGA---ATCCTGCTTTGAAAACTGACTTCAGCTGTTCAGGGTGGATGGGGC---------------------T--------CAGGGGTGCAGCTGACGCGTAGGTTGGCTCCAGCTATCACCCCAGATCTGGTCCATCCGCAACAGCA-----------------------GCCTTGCGTGTGGGCTGAGCAGTTGGTTGACCACATCCAAGCTCTGTTGGGAAAAGAAG----------TCCACTGGTGCCTGTGGTAGGAAACCAGTGCCTCATCCTTGGGCCGGATCAGGTGATCT--------------------GAGGGGTGGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 559240 309 + 162613886 GGG----------------TAGGTCCCACCAGGGTCTGAAACAGTT----CCCTGAGGTGCAGG----GAGGTGGGAGGCAGTGA---ATCCTGCTTTGAAAACTGACTTCAGCTGTTCAGGGTGGATGGGGC---------------GTGGGCT--------CAGGGGTGCAGCTGACGCGTAGGTTGGCTCCAGCTATCACCCCAGATCTGGTCCATCCGCAACAGCA-----------------------GCCTTGCGTGTGGGCTGAGCAGTTGGTTGACCACATCCAAGCTCTGTTGGGAAAAGAAG----------TCCACTGGTGCCTGTGGTAGGAAACCAGTGCCTCATCCTTGGGCCGGATCAGGTGATCT--------------------GAGGGGTGGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 130965 309 - 432965 GGG----------------TAGGTCCCACCAGGGTCTGAAACAGTT----CCCTGAGGTGCAGG----GAGGTGGGAGGCAGTGA---ATCCTGCTTTGAAAACTGACTTCAGCTGTTCAGGGTGGATGGGGC---------------GTGGGCT--------CAGGGGTGCAGCTGACGCGTAGGTTGGCTCCAGCTATCACCCCAGATCTGGTCCATCCGCAACAGCA-----------------------GCCTTGCGTGTGGGCTGAGCAGTTGGTTGACCACATCCAAGCTCTGCTGGGAAAAGAAG----------TCCACTGGTGCCTGTGGTAGGAAACCAGTGCCTCATCCTTGGGCCGGATCAGGTGATCT--------------------GAGGGGTGGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 190307 312 + 85365473 CGG----------------TAGGTCCCACCAGGGGCTGAAACAGTT----CCCTGAGATGCAGGGTTAGGGGTGGGAGGCAGTGA---ATCCTGCTTTGAGAACTGGCTTCAGCTGTTCAGGGTGGATGGGGC---------------GTGGGCT--------CAGGGGTGCATCTGACACGTAGGTTGGCTCCAGCTATTGCCCCAGATCTGGTCCATCCGCAACAGCA-----------------------GCCTT-CGTGTGGGCTGAGCAGTTGATTGGCCACATCCAAGCTCTGTTGGGAAAAGAAG----------TCCACTGGTGCCTGTGGTAGGAAACCAGTGCCTCACCCTTGGGCCAGATCAGGTGACCT--------------------GAGGGGTGGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34037801 332 + 185818997 GGG----------------TAGGTCCCACCAGGGTCTGAAACGGTG----CCCTGAGGTGGAGG----GAGGTTGGGGGCAGTGA---ATCCTGCTTTGAGAACTGCTGTCAGCTGTTCGGGGTGGATGGGGT---------------GTGGGCT--------CGGGGCTGCGTCTGACATGTAGGTTGGCTCCAGCTATCGCCCCAGATAGGGTCTGTCCGCAGCAGCAGTGGGATGAGTGCTGGGCTGAGGGCCCAGCGTGTGGGCTGAGCAGTTTGCTGGCCACATCCAAGCTCTACTGGGGAAAGAAG----------TCCGCTGGTGCCTGTGGTAGGAAACCAGTGCCTCACCCTGGGGCCAGATCAGGGGATCT--------------------GGGGGGTGGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33653752 332 + 192294377 GGG----------------TAGGTCCCACCAGGGTCTGAAACGGTG----CCCTGAGGTGGAGG----GAGGTTGGGGGCAGTGA---ATCCTGCTTTGAGAACTGCTGTCAGCTGTTCGGGGTGGATGGGGT---------------GTGGGCT--------CAGGGCTGCGTCTGACATGTAGGTTGGCTCCAGCTATCGCCCCAGATAGGGTCTGTCCACAGCAGCAGTGGGATGAGTGCTGGGCTGAGGGCCCAGCGTGTGGGCTGAGCAGTTTGCTGGCCACATCCAAGCTCTACTGGGGAAAGAAG----------TCCGCTGGTGCCTGTGGTAGGAAACTAGTGCCTCACCCTGGGGCCAGATCAGGGGATCT--------------------GGGGGGTGGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4421447 332 - 9440265 GGG----------------TAGGTCCCACCAGGGTCTGAAACGGTG----CCCTGAGGTGGAGG----GAGGTTGGGGGCAGTGA---ATCCTGCTTTGAGAACTGCTGTCAGCTGTTCGGGGTGGATGGGGT---------------GTGGGCT--------CGGGGCTGCGTCTGACATGTAGGTTGGCTCCAGCTATCGCCCCAGATAGGGTCTGTCCGCAGCAGCAGTGGGATGAGTGCTGGGCTGAGGGCCCAGCGTGTGGGCTGAGCAGTTTGCTGGCCACATCCAAGCTCTACTGGGGAAAGAAG----------TTTGCTGGTGCCTGTGGTAGGAAACCAGTGCCTCACCCTGGGGCCAGATCAGGGGATCT--------------------GGGGGGTGGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17011375 332 - 21915920 GGG----------------TAGGTCCCACCAGGGTCTGAAATGGTG----CCCTGAGGTGGAGG----GAGGTTGGGGGCAGTGA---ATCCTGCTTTGAGAACTGCTGTCAGCTGTTCGGGGTGGATGGGGT---------------GTGGGCT--------CGGGGCTGTGTCTGACATGTAGGTTGGCTCCAGCTATCGCCCCAGATAGGGTCTGTCCGCAGCAGCAGTGGGATGAGTGCTGGGCTGAGGGCCCAGCGTGTGGGCTGAGCAGTTTGCTGGCCACATCCAAGCTCTACTGGGGAAAGAAG----------TTCGCTGGTGCCTGTGGTAGGAAACCAGTGCCTCACCCTGGGGCCGGATCAGGGGATCT--------------------GGGGGGTGGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 143733 330 - 21531802 GGG----------------TAGGTCCCACCAGGGTCTGAAACGGTG-----CCTGAGGTGGAGG----GAGGTTGGGGGCAGTGA---ATCCTGCTTTGAGAACTGCCGTCAGCTGTTGGCGGTGGATGGGGT---------------GTGGGCT--------CGGGGCTGCATCTGACATGTAGGTTGGCTCCAGCTATCGCCCCAGATCGGGTCCGTCCGCAACAGCAGTGGGATGAGTGCTGGGCTGAGGGCCCAGCGTGTGGGCTGAGCAGTTTGTTGGCCACATCCAAGCTCTACTGGGGAAAGAAG----------TTCGCTGGTGCCTGT-GTAGGAAACCAGTGCCTCACCCTCGGGCCGCATCAGGGGATCT--------------------GGGGGGTGGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 178215 332 - 2515279 GGG----------------TAGGTCCCACCAGGGTCTGAAACGGTG----CCCTGAGGTGGAGG----GAGGTTGGGGGCAGTGA---ATCCTGCTTTGAGAACTGCTGTCAGCTGTTCGGGGTGGATGGGGT---------------GTGGGCT--------CGGGGCTGCGTCTGACATGTAGGTTGGCTCCAGCTATCGCCCCAGATAGGGTCTGTCCGCAGCAGCAGTGGGATGAGTGCTGAGCTGAGGGCCCAGCGTGTGGGCTGAGTAGTTTGCTGGCCACATCCAAGCTCTACTGGGGAAAGAAG----------TCCGCTGGTGCCTGTGGTAGGAAACCAGTGCCTCACCCTGGGGCCGGATCAGGGGATCT--------------------GGGGGGTGGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 335958 332 + 6586416 GGG----------------TGGGTCCCACCAGGGTCTGAAATGGTG----CCCTGAGGTGGAGG----GAGGTTGGGGGCAGGAA---ATCCTGCTTTGAGAACTGCCATCAGCTGTTTGGGGTGGATGGGGT---------------GTGGGCT--------CGGGGCTGCGTCTGACATGTAGGTTGGCTCTAGCTGTCACCCCAGATCGGGTCCGTCCGCAACAGCAGTGGGATGAGTGCTGGGCTGAGGGCGCAGCATGTGGGCTGAGCAGTTTGTTGGCCACATCCAAGCTCTATTGGGGAAAGAAG----------TCCGCTGGTGCCTGTGGTAGGAAACCAGTGCCTCACCCTCGGGTCGGATCAGGGGATCT--------------------GAGGGGTGGGA i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 381064 362 - 2409723 GGGTAGTCACTGGCTGTTTTAGGTGGTACCAGGATCTGAAAAAGTGAGTTCCCCCAGGTGCAGG----GAAGTGAGAGGCAGTGA---ATCCTGCTTTGAAAACTGACTTCAGCTGTTCAGAGTAGATGGGGCG-TGGGGGTTGGGGTGTGGGCT--------CAGGGGTGCATCTGACACATATGTTGGCTCCAGCTATCACCCCAGATGGGGTCCATCCGTGACAGCA-----------------------GCCTTGCGTGTGGGCTGAGCAGTTTGTTAGCCACACCGAGGCTGGACAGGGAAAAGAGG----------CCCACTGGTGCCTGTGATACGAGACCTGTGCCTCA-CCTTGGGCCAAAGCAGGTGACTTGAGGGGAGGGAGGAGCCCCAGAGGGGTGGGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 542678 362 - 2125214 GAGTAGTCACTGGCTGTTTTAGGTGGTACCAGGATCTGAAAAAGTGAGTTCCCCCAGGTGCAGG----GAAGTGGGGGGCAGTGA---ATCCTGCTTTGAAAACTGACTTCAGCTGTTCAGAGTAGatggggca-tgggggttggggtgtgggct--------caggggtgcatCTGACACATATATTGGCTCCTGCTATCACCCCAGATGGGGTCCATCCGTGACAGCA-----------------------GCCTTGCGTGTGGGCTGAGCAGTCTGTTAGCCATACCCAGGCTCGACAGGGAAAAGAAG----------CCCACCGGTGCCTGTGATACAAAACCTGTGCCTCA-CCTTGGGCCAAAGCAGGTGACTTGAGGGGAGGGAGGAGCCCCAGAGGGGTGGAA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 127746 362 + 376347 GGGTAGTCACTGGCTGTTTTAGGTGGTACCAGGATCTGAAAAAGTGAGTTCCCCCAGGTGCAGG----GAAGTGGGGGGCAGTGA---ATCCTGCTTTGAAAACTGACTTCAGCTGTTTAGAGTAGatggggca-tgggggttggggtgtgggct--------caggggtgcatCTGACACATATGTTGGCTCCAGCCATCACCCCAGAGGGGGTCCATCCGTGACAGCA-----------------------GCCTTGCGTGTGGGCTGAGCAGTCTGTTAGCCACACCCAGGCTCGACGGGGAAAAGAAG----------CCCACTGGTGCCTGTGATACGAATCCTGTGCCTCA-CCTTGGGCCGAAGCAGGTGACCCGAGGGGAGGGAGGAGCCCCAGAGGGGTGGGA i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61059108 327 - 77573801 GGA----------------GAGGCCCCGTCAGGCTTTAACATAGTG---TTCCAGGGGTGTAGG----CTGGTGAGAGGCATCCAGTGGTCTTGCTTTCAAAATCAGCATCATCTACCCAAGATGGACAGGGAAGTAGGTGCCAG---GTGGGTTCCAGTAAGCAGGGCTGCTGTGGA-------GTCGGCTCCAGTTACCACCCCAATTCTGACCCTTC-----CAGAA-----------------------TCAGTGCATGGAG---GGCCATTCTGTTAG-CATATCCAGGCTCGACAGAAAGAAAAGGAAGAAAGGCATCTGCTGATGCCCCAAACAGAAAATCAGTTAAGTAGCCTGGGCCAGGAGCAGAGGGTTT--------------------AAATGAAGGAA i canFam3.chr6 I 1 I 758 e otoGar3.GL873611 2272524 0 - 8137123 C e calJac3.chrUn_GL286444 66565 11 + 138751 I a score=869404.000000 s hg38.chr7_KI270899v1_alt 169476 122 + 190869 ACTGCTGCC-CCCGGCTTGGCTGTTCTCCATAAGCCGGACAGGCCGACCCATATGCGCGT--GTGTGTGAGCTCGTGGTGAGCAGAGCCCTCCCCCTTCAGCGGAGGTCTGTGACCACCTCCCCG s panTro5.chr7_NW_015973580v1_random 44918 122 - 83720 ACTGTTGCC-CCCGGCTTGGCTGTTCTCCAGAAGCCGGACAGGCCGACCCAAATGCGCGT--GTGCGTGAGCTCGTGGTGAGCAGAGCCCTCCCCCTTCAGCGGAGGTCTGTGACCGCCTCCCCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 559549 122 + 162613886 ACTGCTGCC-CCCGGCTTGGCTGTTCTCCAGAAGCCGGACAGGCCGACCCAAATGCGCAT--GTGCGTGAGCTCGTGGTCAGCAGAGCCCTCCCCCTTCATCGGAGGTCTGTGACCGCCTCCCCG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131274 122 - 432965 ACTGCTGCC-CCCGGCTTGGCTGTTCTCCGTAAGCTGGACAGGCCGACCCAAATGCGCGT--GTGCGTGAGCTCGTGGTGAGCAGAGCCCTCCCCCCTCAGCGGAGGTCTGTGACCGCCTCTCCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 190619 122 + 85365473 ACTGCTGCC-CCTGGCTTGGCTGCTCTCCATAAGCCGGACAGGCCAACCCAAACGCGCAT--GTGTGTGAGCTCACGGTGAGCAGAGCCCTCCCCCTTCAGCGGAGGTCTGTGACCGCCTCCCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038133 122 + 185818997 AGTGCTGTC-CTCGGCTTGGCTGCTCTCTGTGCGCTGGACAATCCAACCCAAATGCACATGTGTGTGTGAGCTCATGGTGAGCAGAG-CCTCCCGCTTCGGCAGAGGTCTGTGACTGCCTC-CGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654084 122 + 192294377 AGTGCTGTC-CTCGGCTTGGCTGCTCTCTGTGCGCTGGACAATCCAACCCAAATGCACATGTGTGTGTGAGCTCATGGTGAGCAGAG-CCTCCCGCTTCGGCAGAGGTCTGTGACTGCCTC-CGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4421779 122 - 9440265 AGTGCTGTC-CTCGGCTTGGCTGCTCTCTGTGCGCTGGACAATCCAACCCAAATGCACATGTGTGTGTGAGCTCATGGTGAGCAGAG-CCTCCCGCTTCGGCAGAGGTCTGTGACTGCCTC-CGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17011707 122 - 21915920 AGCGCTGTC-CTCGGCTTGGCTGCTCTCTGTGCGCTGGACAATCCAACCCAAATGCACATGTGTGTGTGAGCTCATGGTGAGCAGAG-CCTCCCGCTTCGGCAGAGGTCTGTGACCGCCTC-CGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144063 118 - 21531802 AGTGCTGTC-CCCGGCTTGGCTGCTCTCCGTGTGCTGGACAATCCAACCCAAATGCAC----GTGTGTGAGCTCACGGTGAGCAGAG-CTTCCCGCTTCGGCAGAGGTCTGTGACCGCCTC-CGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 178547 122 - 2515279 AGTGCTGTC-CTCGGCTTGGCTGCTCTCTGTGCGCTGGACAATCCAACCCAAATGCACATGTGTGTGTGAGCTCATGGTGAGCAGAG-CCTCCCGCTTCGGCAGAGGTCTGTGACCGCCTC-CGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336290 120 + 6586416 AGTGCTGCC-CCCGGCTTGGCTGCCCTCTGTGAGCTGGACAATTGAACCCAAATGCACAT--GTGTGTGAGCTCACGGTGAGCAGAG-CCTCCCGCTTTGGCAGAGGTCTGTGACCGCCTC-CGG i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 381426 123 - 2409723 AGTGCTGCTACCTGGCTTGGCTGTTCTCCGTAAGCCAGACAGGCCAACCCGAATGCTCAC--GCGGGTGAGCTCAGGATGAGCAGAGCCCTCCCCCTCCAGCAGAGGTCTGTGACCACCTCCCAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 543040 123 - 2125214 AGTGCTGCTACCTGGCTTGGCTGTTCTCCGTAAGCCAGACAGGCCAGCCCGAATGCTCAT--GCGGGTGAGCTCAAGATGAGCAGAGCCCTCCCCCTTCAGCAGAGGTCTGTGACCACCTCCCGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 128108 123 + 376347 AGTGCTGCTCCCTGGCTTGGCTGTTCTCCGTAAGGCAGACAGGCCAACCCAAATGTGCAT--GCGGGTGAACTCAAGATGAGCAGAGCCCTTCCCCTTCAGCGGAGGTCTGTGACCGCCTCCCGG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e calJac3.chrUn_GL286444 66565 11 + 138751 I a score=3128087.000000 s hg38.chr7_KI270899v1_alt 169598 357 + 190869 AGCTCCTTCC----------CTCCCCAGGGCACCGCCGAGGCCTGGCTGACATCACGGGGTGTCCTGCCCAAGGCCCTGTGGTTACTGGACACACTCAACCTGCTGC----CTCTGGCCTTTTCCTCACTTTCTAAACCTTCTCTCCACTTCCCAGGGAACTCCTCCTGCACAAGGCGTCTTGGCTCCTGCCCTGCTACACCGACCACGTCCCTCCCTCAGCCGGTCCCCGATACTGAGCACCTTAGAGGCA---GCCACTCTTCGCAGGCCTGGTTACCTGTCTTGCACCATGTGCATCTCCTCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCCCCAGAGCTCGCAAAGGCAGAGACCCCAGGCTCCCT s panTro5.chr7_NW_015973580v1_random 45040 357 - 83720 AGCTCCTTCC----------CTCCCCAGGGCACCGCCGAGGCCTGGCTGACATCACGGGGTGTCCTGCCGAAGGCCCTGTGGTTACTGAACACCCTCAACCTGCTGC----CTCTGGCCTTTTCCTCACTTTCTAAACCTTCTCTCCACTTCCCAGGGAACTCCTCCTGCACGAAGCGTCTTGGCTCCTGCCCTGCTACACGGACCACGTCCCTCCCTCAGCCGGTCCCCGATACTGAGCACCTTAGAGGCA---GCCACTCTTCGCAGACCTGGTTGCCCGTCTTGTACCATGTGCATCTCCTCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAAGGCAGAGACCCCAGGCTCCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 559671 357 + 162613886 AGCTCCTTCC----------CTCCCTAGGGCACCGCCGAGGCCTGGCTGACATCACGGGGTGTCCTGCCGAAGGCCCTGTGGTTACTGGACACCCTCAACCTGCTGC----CTCTGGCCTTTTCCTCACTTTCTAAACCTTCTCTCCACTTCCCAGGGAACTCCTCCTTCAGGAAGCGTCTTGGCTCCTGCCCTGCTACACGGACCACGTCCCTCCCTCAGCCGGTCCCCGATACTGAGCACCTTAGAGGCA---GCCACTCTTCGCAGACCTGGTTGCCCGTCTTGTACCATGTGCATCTCCTCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAAGGCAGAGACCCCAGGCTCCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131396 357 - 432965 AGCTCCTTCC----------CTCCCCAGGGCACCGCCGAGGCCTGGCTGACATCACGGGGTGTCCTGCCCAAGGCCCTGTGGTTACTGGACACCCTCAACCTGCTCC----CTCTGGCCTTTTCCTCACTTTCTAAACCTTCTCTCCACTTCCCAGGGAAGTCCTCCTGCACGAAGCGTCTTGGCTCCTGCCCTGCTACACGGACCACATCCCTCCCTCAGCCGGTCCCCAATACTGAGCACCTTAGAGACA---GCCACCCTTCGCAGACCTGGTTGCTTGTCTTGCACCATGTGCATATCCTCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 190741 354 + 85365473 AGCTCCTTCC----------CTCCCCAGGGCACCACCGAGGCCCGGCTGACATCATGAGGTGTCCTGCCCAAGGCCCTGTGGTTACTGGACACCCTCAACCTGCTGC----CTCTGCCCTTTTCCTCACTTTCTAAACCTTCTCTCCACTTCCCAGGGAACTCCTCCTGCACGAAGCATCTTGGCTCTTGCCCT-CCGCACCGACCACGTCCCTCTCTCAGCCGGTCCCCGATACCGAGCACGTTAGAGGCA---GCCACTC--CGCAGACCTGGTTGCCCATCTTGCACCATCTGCATCTCCTCCTGTGCACGGAGGAGGACGCCAAGGTTCCCAGGCCTGGAGCTCGCAAGGACAGAGACCCCAGGCTCCCT i nomLeu3.chr20 C 0 T 72 s rheMac8.chr3 34038255 353 + 185818997 AGCGCCTTCC----------CTTA--AAGACACCACCGAGGCCTGGTGGACGTCACGA-GTGTCCTGCCCAAGGCCCTGTGATTACTGGACTCCCTCAACCTGCTGC----CTCCGA-CTCTTCCTCACTTTCTAAACCTTCTCTCCGCTTCCTGGGGAGCTCCTCCTGCACGACGTGTCCTGGCTCCTGCGCTGCCACACCGACCACGTCCCTCTTTCAGCCGGTCCCCGATACTGAGCATCTTAGAGGCA---GCCACTCTTCGCAGACCTGGTTGCCCATCTTCCACCATTTGCATCTCCTCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654206 353 + 192294377 AGCGCCTTCC----------CTTA--AAGACACCACCGAGGCCTGGTGGACGTCACGA-GTGTCCTGCCCAAGGCCCTGTGATTACTGGACTCCCTCAACCTGCTGC----CTCCGA-CTCTTCCTCACTTTCTAAACCTTCTCTCCGCTTCCTGGGGAGCTCCTCCTGCACGACGTGTCCTGGCTCCTGCGCTGCCACACCAACCACGTCCCTCTTTCAGCCGGTCCCCGATACTGAGCATCTTAGAGGCA---GCCACTCTTCGCAGACCTGGTTGCCCATCTTCCACCATTTGCATCTCCTCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4421901 353 - 9440265 AGCGCCTTCC----------CTTA--AAGACACCACCGAGGCCTGGTGGACATCACGA-GTGTCCTGCCCAAGGCCCTGTGATTACTGGACTCCCTCAACCTGCTGC----CTCCGA-CTCTTCCTCACTTTCTAAACCTTCTCTCCGCTTCCTGGGGAGCTCCTCCTGCACGACATGTCCTGGCTCCTGCGCTGCCACACCGACCACGTCCCTCTTTCAGCCGGTCCCCGATACTGAGCATCTTAGAGGCA---GCCACTCTTCGCAGACCTGGTTGCCCATCTTCCACCATTTGCATCTCCTCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17011829 353 - 21915920 AGTGCCTTCC----------CTTA--AAGACACCACCGAGGCCTGGTGGATGTCACGA-GTGTCCTGCCCAAGGCCCTGTGATTACTGGACTCCCTCAACCTGCTGC----CTCCGA-CTCTTCCTCACTTTCTAAACCTTCTCTCCGCTTCCTGGGGAGCTCCTCCTGCACGACGTGTCCTGGCTCCTGCGCTGCCACACCGACCACGTCCCTCTTTCAGCCGGTCCCCGATACTGAGCATCTTAGAGGCA---GCCACTCTTCGCAGACCTGGTTGCCCATCTTCCACCATTTGCATCTCCTCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGATCCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144181 352 - 21531802 AACTCCTTCC----------CTCC--AGGACACCGCCGGGGCCTGGCGGACGTCACGA-GTGTCCTGCCCAAGGCCCTGTGGTTACTGGACTCCCTCAACCTGCTGC----CTCCGA-CTCTTCCTCACTTTCTAAACCTTCTCTCCGCTTCCCGGGGAGCTCCTCCTGCACGACGTGTCCTGGCTCCTGCCCTGCCACAGCGGCCACGTCCCTCCTTCAGCCGGTCCCTGATACTGAGCATCTTAGAGGCA---GCCGCTCTTCGCAGACCTGGTTGCCCATCTTCCACCATTTGCATCTCCTCCTG-GCACAGAGGAGGAAACCGAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 178669 353 - 2515279 AGCGCCTTCC----------CTTA--AAGACACCACCGAGGCCTGGTGGACGTCACAA-GTGTCCTGCCCAAGGCCCTGTGATTACTGGACTCCCTCGACCTGCTGC----CTCCGA-CTCTTCCTCACTTTCTAAACCTTCTCTCCGCTTCCTGGGGAGCTCCTTCTGCACGACGTGTCCTGGCTCCTGCGCTGCCACACCGACCACGTCCCTCTTTCAGCCGGTCCCCGATACTGAGCATCTTAGAGGCA---GCCACTCTTCACAGACCTGGTTGCCCATCTTCCACCATTTGCATCTCCTCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGATCCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336410 353 + 6586416 AGCGCCTTCC----------CTCC--AGGACACCGCTGAGGCCTGGCGGACGTCACGA-GTGTCCTGCCCGAGGCCCTGTGGTTACTGGACTCCCTCAACCTGCTGC----CTGCGA-CTCTTCCTCACTTTCTAAACCTTCTCTCCACTTCCCGGGGAGCTCCTCCTGCACGAAGTGTCCTGGCTCCTGCCCTGCCACAGCGACCATGTCCCTCCTTCAGCTGGTCCCCAATACTGAGCATCTTAGAGGCA---GCCACTCTTCGCAGACCTGGTTGCCCATCTTCCACCATTTGCATCTCCTCCTGTGCACAGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAGACGCAGAGACCCCAGGCTCCCT i colAng1.NW_012117710v1 C 0 T 72 s calJac3.chrUn_GL286444 66576 355 + 138751 AGCTCCTTCT----------CTTCCCAGGGTGCCACCAAGGGTGGGCTGACATCATGAGGTGTCCTGCCCCTGGCCCTGTGGTTACTGGACACCCCTGACCTGCTGC----CTCTGACCCCTTACTCACTTTCTAAACCTTCTCTCCACTTCCCA-GGAGCTCCTCCCACATGAAGAGTCTTGGCTCCTGCTCTGCCACACTGACAACATCTGTCTTCCAGCAGATTCCTAATACTGAGCAGCTTAGGGGCA---GCCATATTTCACAGACCTGGTTTCCAATTTTGCACAATCTGCATCTCCTCCTGTGCACAGAGGAGGAAACC-AGGCTTCCAGCCCCAGAGCTGGCAAATGCAGAGACCCTAGGCTCCCT i calJac3.chrUn_GL286444 I 11 C 0 s saiBol1.JH378296 381549 363 - 2409723 AGCTCCCTCCCTTCCCAGGGCTTCCCAGGGCACCGCTGAGGCTGGGCTGACACCATGAGGTGTCCTGCCCATGGCCCTGTGGTTACTGGACACCCC-GACCTGCTGC----CTCTGACCCCTTCCTCACTTTCTAAACCTTCTCTCCACTTCCCG-GGAGCTCCTCCCACGTGAAAAGTCTTGGCTCCTGCTCTGCCACACCGACCACATCCGTCTTCCAGCAGGTCCACAATACTGAGCAGCTTAGGGGCA---GCCACGTTTAGCACACCTGGTTTCCAATCTT-CACAATCTGCATCTCCTCCTGTGCACAGAGGAGGAAACC-AGGCTTCCAGCCCCGGAGCTGGCAGATGCAGAGACCCTAGGCTCCCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 543163 372 - 2125214 AGCTTCTTCCCTTCCCAGGGCTTCCCAGGGTGCTGCTGAGGCTGGGCTGACATCATGAGGTGCCCTGCCCATCGTCCTGTGGTTACTGGACACCCCCGACCTGCTGCCTCTCTCTGACCCCTTCCTCACTTTCTAAACCTTCTCTCCACTTCCCA-GGAGCTCCTCCGACGTGAAGAGTCTTGGCTCCTGCTCTGCCACACCAACCACATCCATCTTCCAGCAGGTCCCTAATACTGAGCAGCTTAGGGGCAGCTGCCACGTTTCACAGATCTGGTTTCCAATCTTGCACAATCTGCACCTCCTCCTGTGCACAGAGGAGGAAACC-AGGCTTCCAGCCCCAGAGCTGGCAAATGCAGAGACCCTAGGCTCCCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 128231 364 + 376347 AGCTCCTTCCCTTCCCAGGGCTTCCCAGGGCGCCGCCGAGGCCGGGCTGACATCCCGAGGTGTCCTGCACGTGGCCCTGTGGTTACTGGACACCCC-GACCTGCTGC----CTCTGACCCCCTCCTCACTTTCTAAACCTTCTCTCCACTTCCCA-GGAGCTCCTCCCACGTGAAGAGTCTTGGCTCCTGCTCTGCCACACCGACCACGTCCGTCTTCCAGCAGGTCCCTGATACTGAGCAGCTTAGGGGCA---GCCACATGTCGCAGACCCGGTTTCCAATCTTGCACAGTCTGCATCTCCACCTGGGCACAGAGGAGGGAACC-AGGCTTCCAGCCCCGGAGCTGGCAAATGCAGAGACCCTAGGCTCCCT i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I a score=34762.000000 s hg38.chr7_KI270899v1_alt 169955 4 + 190869 GTGT s panTro5.chr7_NW_015973580v1_random 45397 4 - 83720 GTGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560028 4 + 162613886 GTGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131753 4 - 432965 GTGT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34038608 4 + 185818997 GTGT i rheMac8.chr3 C 0 T 76 s macFas5.chr3 33654559 4 + 192294377 GTGT i macFas5.chr3 C 0 T 76 s macNem1.NW_012019910v1 4422254 4 - 9440265 GTGT i macNem1.NW_012019910v1 C 0 T 76 s cerAty1.NW_012002954v1 17012182 4 - 21915920 GTGT i cerAty1.NW_012002954v1 C 0 T 76 s chlSab2.chr28 144533 4 - 21531802 GTGT i chlSab2.chr28 C 0 T 64 s manLeu1.NW_012101810v1 179022 4 - 2515279 GTGT i manLeu1.NW_012101810v1 C 0 T 76 s calJac3.chrUn_GL286444 66931 4 + 138751 GTGT i calJac3.chrUn_GL286444 C 0 T 75 s saiBol1.JH378296 381912 4 - 2409723 GTGT i saiBol1.JH378296 C 0 T 75 s cebCap1.NW_016107703v1 543535 4 - 2125214 GTGT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 128595 4 + 376347 GTGT i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 336763 72 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e nomLeu3.chr20 191095 72 + 85365473 T a score=600.000000 s hg38.chr7_KI270899v1_alt 169959 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 45401 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560032 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131757 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 e colAng1.NW_012117710v1 336763 72 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144537 64 - 21531802 T e manLeu1.NW_012101810v1 179026 76 - 2515279 T e cerAty1.NW_012002954v1 17012186 76 - 21915920 T e macNem1.NW_012019910v1 4422258 76 - 9440265 T e macFas5.chr3 33654563 76 + 192294377 T e rheMac8.chr3 34038612 76 + 185818997 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e saiBol1.JH378296 381916 75 - 2409723 T e cebCap1.NW_016107703v1 543539 0 - 2125214 C e calJac3.chrUn_GL286444 66935 75 + 138751 T e nomLeu3.chr20 191095 72 + 85365473 T a score=83728.000000 s hg38.chr7_KI270899v1_alt 169960 12 + 190869 CTCCTGTGCATG s panTro5.chr7_NW_015973580v1_random 45402 12 - 83720 CTCCTGTGCACG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560033 12 + 162613886 CTCCTGTGCACG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131758 12 - 432965 CTCCTGTGCACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191023 12 + 85365473 CTCCTGTGCACG i nomLeu3.chr20 T 72 C 0 s rheMac8.chr3 34038536 12 + 185818997 CTCCTGTGCACA i rheMac8.chr3 T 76 C 0 s macFas5.chr3 33654487 12 + 192294377 CTCCTGTGCACA i macFas5.chr3 T 76 C 0 s macNem1.NW_012019910v1 4422182 12 - 9440265 CTCCTGTGCACA i macNem1.NW_012019910v1 T 76 C 0 s cerAty1.NW_012002954v1 17012110 12 - 21915920 CTCCTGTGCACA i cerAty1.NW_012002954v1 T 76 C 0 s manLeu1.NW_012101810v1 178950 12 - 2515279 CTCCTGTGCACA i manLeu1.NW_012101810v1 T 76 C 0 s colAng1.NW_012117710v1 336691 12 + 6586416 CTCCTGTGCACA i colAng1.NW_012117710v1 T 72 C 0 s calJac3.chrUn_GL286444 66860 12 + 138751 CTCCTGTGCACA i calJac3.chrUn_GL286444 T 75 C 0 s saiBol1.JH378296 381841 12 - 2409723 CTCCTGTGCACA i saiBol1.JH378296 T 75 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144537 64 - 21531802 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=455371.000000 s hg38.chr7_KI270899v1_alt 169972 60 + 190869 GAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAAGGCAGAGACCCCAGGCTCCCT s panTro5.chr7_NW_015973580v1_random 45414 60 - 83720 GAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTTGCAAACACAGAGACCCCAGGCTCCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560045 60 + 162613886 GAGGAGGAAACCAAGGCTTCCAGCCCCAGAGCTCGCAAACACAGAGACCCCAGGCTCCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131770 60 - 432965 GAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAACCCAGAGACCCCAGGCTCCCT i gorGor5.CYUI01015914v1 C 0 T 77 s nomLeu3.chr20 191035 60 + 85365473 GAGGAGGACGCCAAGGTTCCCAGGCCTGGAGCTCGCAAGGACAGAGACCCCAGGCTCCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038548 60 + 185818997 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654499 60 + 192294377 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422194 60 - 9440265 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012122 60 - 21915920 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGATCCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144473 60 - 21531802 GAGGAGGAAACCGAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i chlSab2.chr28 T 64 C 0 s manLeu1.NW_012101810v1 178962 60 - 2515279 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGATCCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336703 60 + 6586416 GAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAGACGCAGAGACCCCAGGCTCCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66872 59 + 138751 GAGGAGGAAACC-AGGCTTCCAGCCCCAGAGCTGGCAAATGCAGAGACCCTAGGCTCCCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381853 59 - 2409723 GAGGAGGAAACC-AGGCTTCCAGCCCCGGAGCTGGCAGATGCAGAGACCCTAGGCTCCCT i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=26481.000000 s hg38.chr7_KI270899v1_alt 170032 3 + 190869 GTG s panTro5.chr7_NW_015973580v1_random 45474 3 - 83720 GTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560105 3 + 162613886 GTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131753 3 - 432965 GTG i gorGor5.CYUI01015914v1 T 77 C 0 s nomLeu3.chr20 191095 3 + 85365473 GTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038608 3 + 185818997 GTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654559 3 + 192294377 GTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422254 3 - 9440265 GTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012182 3 - 21915920 GTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144533 3 - 21531802 GTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179022 3 - 2515279 GTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336763 3 + 6586416 GTG i colAng1.NW_012117710v1 C 0 T 75 s calJac3.chrUn_GL286444 66931 3 + 138751 GTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381912 3 - 2409723 GTG i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=12438.000000 s hg38.chr7_KI270899v1_alt 170035 2 + 190869 TG s panTro5.chr7_NW_015973580v1_random 45477 2 - 83720 TG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560108 2 + 162613886 TG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131756 2 - 432965 TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191098 2 + 85365473 GG i nomLeu3.chr20 C 0 T 77 s rheMac8.chr3 34038611 2 + 185818997 TG i rheMac8.chr3 C 0 T 77 s macFas5.chr3 33654562 2 + 192294377 TG i macFas5.chr3 C 0 T 77 s macNem1.NW_012019910v1 4422257 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 T 77 s cerAty1.NW_012002954v1 17012185 2 - 21915920 TG i cerAty1.NW_012002954v1 C 0 T 77 s chlSab2.chr28 144536 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179025 2 - 2515279 TG i manLeu1.NW_012101810v1 C 0 T 77 s calJac3.chrUn_GL286444 66934 2 + 138751 TG i calJac3.chrUn_GL286444 C 0 T 76 s saiBol1.JH378296 381915 2 - 2409723 TG i saiBol1.JH378296 C 0 T 76 e colAng1.NW_012117710v1 336766 75 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=9100.000000 s hg38.chr7_KI270899v1_alt 170037 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 45479 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560110 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131758 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191023 1 + 85365473 C i nomLeu3.chr20 T 77 C 0 s rheMac8.chr3 34038536 1 + 185818997 C i rheMac8.chr3 T 77 C 0 s macFas5.chr3 33654487 1 + 192294377 C i macFas5.chr3 T 77 C 0 s macNem1.NW_012019910v1 4422182 1 - 9440265 C i macNem1.NW_012019910v1 T 77 C 0 s cerAty1.NW_012002954v1 17012110 1 - 21915920 C i cerAty1.NW_012002954v1 T 77 C 0 s chlSab2.chr28 144538 1 - 21531802 C i chlSab2.chr28 C 0 T 66 s manLeu1.NW_012101810v1 178950 1 - 2515279 C i manLeu1.NW_012101810v1 T 77 C 0 s colAng1.NW_012117710v1 336691 1 + 6586416 C i colAng1.NW_012117710v1 T 75 C 0 s calJac3.chrUn_GL286444 66860 1 + 138751 C i calJac3.chrUn_GL286444 T 76 C 0 s saiBol1.JH378296 381841 1 - 2409723 C i saiBol1.JH378296 T 76 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=74609.000000 s hg38.chr7_KI270899v1_alt 170038 11 + 190869 TCCTGTGCATG s panTro5.chr7_NW_015973580v1_random 45480 11 - 83720 TCCTGTGCACG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560111 11 + 162613886 TCCTGTGCATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131759 11 - 432965 TCCTGTGCACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191024 11 + 85365473 TCCTGTGCACG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038537 11 + 185818997 TCCTGTGCACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654488 11 + 192294377 TCCTGTGCACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422183 11 - 9440265 TCCTGTGCACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012111 11 - 21915920 TCCTGTGCACA i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 178951 11 - 2515279 TCCTGTGCACA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336692 11 + 6586416 TCCTGTGCACA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66861 11 + 138751 TCCTGTGCACA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381842 11 - 2409723 TCCTGTGCACA i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 66 - 21531802 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=467452.000000 s hg38.chr7_KI270899v1_alt 170049 63 + 190869 GAGGAGGAAACCAAGGCTTCCAGCC-CCGGAGCTCGCAAAGGCAGAGA-CCCCAGGCTCCCTGTG s panTro5.chr7_NW_015973580v1_random 45491 63 - 83720 GAGGAGGAAACCAAGGCTTCCAGCC-CCGGAGCTTGCAAACGCAGAGA-CCCCAGGCTCCCTGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560122 65 + 162613886 GAGGAGGAAACCAAGGCTTCCAGCCTCCGGAGCTCGACAACGCGGAGACCCCCAGGCTCCCTGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131770 63 - 432965 GAGGAGGAAACCAAGGCTTCCAGCC-CCGGAGCTCGCAAACCCAGAGA-CCCCAGGCTCCCTGTG i gorGor5.CYUI01015914v1 C 0 T 152 s nomLeu3.chr20 191035 63 + 85365473 GAGGAGGACGCCAAGGTTCCCAGGC-CTGGAGCTCGCAAGGACAGAGA-CCCCAGGCTCCCTGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038548 63 + 185818997 GAGGAAGAAACCAAGGCTTCCAGCC-CCGGAGCTGGCAAACGCAGAGA-CCCCAGGCTCCCTGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654499 63 + 192294377 GAGGAAGAAACCAAGGCTTCCAGCC-CCGGAGCTGGCAAACGCAGAGA-CCCCAGGCTCCCTGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422194 63 - 9440265 GAGGAAGAAACCAAGGCTTCCAGCC-CCGGAGCTGGCAAACGCAGAGA-CCCCAGGCTCCCTGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012122 63 - 21915920 GAGGAAGAAACCAAGGCTTCCAGCC-CCGGAGCTGGCAAACGCAGAGA-CCCCAGGATCCCTGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144473 63 - 21531802 GAGGAGGAAACCGAGGCTTCCAGCC-CCGGAGCTGGCAAACGCAGAGA-CCCCAGGCTCCCTGTG i chlSab2.chr28 T 66 C 0 s manLeu1.NW_012101810v1 178962 63 - 2515279 GAGGAAGAAACCAAGGCTTCCAGCC-CCGGAGCTGGCAAACGCAGAGA-CCCCAGGATCCCTGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336703 63 + 6586416 GAGGAGGAAACCAAGGCTTCCAGCC-CCGGAGCTGGCAGACGCAGAGA-CCCCAGGCTCCCTGTG i colAng1.NW_012117710v1 C 0 T 75 s calJac3.chrUn_GL286444 66872 62 + 138751 GAGGAGGAAACC-AGGCTTCCAGCC-CCAGAGCTGGCAAATGCAGAGA-CCCTAGGCTCCCTGTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381853 62 - 2409723 GAGGAGGAAACC-AGGCTTCCAGCC-CCGGAGCTGGCAGATGCAGAGA-CCCTAGGCTCCCTGTG i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=11275.000000 s hg38.chr7_KI270899v1_alt 170112 2 + 190869 TG s panTro5.chr7_NW_015973580v1_random 45554 2 - 83720 TG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560187 2 + 162613886 TG i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 191098 1 + 85365473 -G i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 34038611 2 + 185818997 TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654562 2 + 192294377 TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422257 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012185 2 - 21915920 TG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144536 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179025 2 - 2515279 TG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 66934 2 + 138751 TG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381915 2 - 2409723 TG i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 336766 75 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C e gorGor5.CYUI01015914v1 131833 152 - 432965 T a score=9100.000000 s hg38.chr7_KI270899v1_alt 170114 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 45556 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560189 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131681 1 - 432965 C i gorGor5.CYUI01015914v1 T 152 C 0 s nomLeu3.chr20 191100 1 + 85365473 C i nomLeu3.chr20 I 1 T 77 s rheMac8.chr3 34038613 1 + 185818997 C i rheMac8.chr3 C 0 T 77 s macFas5.chr3 33654564 1 + 192294377 C i macFas5.chr3 C 0 T 77 s macNem1.NW_012019910v1 4422259 1 - 9440265 C i macNem1.NW_012019910v1 C 0 T 77 s cerAty1.NW_012002954v1 17012187 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 T 78 s chlSab2.chr28 144538 1 - 21531802 C i chlSab2.chr28 C 0 T 66 s manLeu1.NW_012101810v1 179027 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 T 78 s colAng1.NW_012117710v1 336691 1 + 6586416 C i colAng1.NW_012117710v1 T 75 C 0 s calJac3.chrUn_GL286444 66936 1 + 138751 C i calJac3.chrUn_GL286444 C 0 T 76 s saiBol1.JH378296 381917 1 - 2409723 C i saiBol1.JH378296 C 0 T 76 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=326033.000000 s hg38.chr7_KI270899v1_alt 170115 71 + 190869 TCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCACAAACGCAGAGACCCCAGGCTCCCT s panTro5.chr7_NW_015973580v1_random 45557 71 - 83720 TCCTGTGCACAGAGGAGGAAACCAAGGCTTCCAGCCCCAGAGCTCGCAAACGCAGAGACCCCAGGCTCCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560190 71 + 162613886 TCCTGCGCATGGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCT i panPan2.chr7 C 0 T 156 s gorGor5.CYUI01015914v1 131682 71 - 432965 TCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191024 71 + 85365473 TCCTGTGCACGGAGGAGGACGCCAAGGTTCCCAGGCCTGGAGCTCGCAAGGACAGAGACCCCAGGCTCCCT i nomLeu3.chr20 T 77 C 0 s rheMac8.chr3 34038537 71 + 185818997 TCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i rheMac8.chr3 T 77 C 0 s macFas5.chr3 33654488 71 + 192294377 TCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i macFas5.chr3 T 77 C 0 s macNem1.NW_012019910v1 4422183 71 - 9440265 TCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i macNem1.NW_012019910v1 T 77 C 0 s colAng1.NW_012117710v1 336692 71 + 6586416 TCCTGTGCACAGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAGACGCAGAGACCCCAGGCTCCCT i colAng1.NW_012117710v1 C 0 T 72 s calJac3.chrUn_GL286444 66861 70 + 138751 TCCTGTGCACAGAGGAGGAAACC-AGGCTTCCAGCCCCAGAGCTGGCAAATGCAGAGACCCTAGGCTCCCT i calJac3.chrUn_GL286444 T 76 C 0 s saiBol1.JH378296 381842 70 - 2409723 TCCTGTGCACAGAGGAGGAAACC-AGGCTTCCAGCCCCGGAGCTGGCAGATGCAGAGACCCTAGGCTCCCT i saiBol1.JH378296 T 76 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 66 - 21531802 T e manLeu1.NW_012101810v1 179028 78 - 2515279 T e cerAty1.NW_012002954v1 17012188 78 - 21915920 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=17820.000000 s hg38.chr7_KI270899v1_alt 170186 5 + 190869 CTGTG s panTro5.chr7_NW_015973580v1_random 45628 5 - 83720 GTGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560105 5 + 162613886 GTGTG i panPan2.chr7 T 156 C 0 s gorGor5.CYUI01015914v1 131753 5 - 432965 GTGTG i gorGor5.CYUI01015914v1 C 0 T 77 s nomLeu3.chr20 191095 5 + 85365473 GTGGG i nomLeu3.chr20 C 0 T 77 s rheMac8.chr3 34038608 5 + 185818997 GTGTG i rheMac8.chr3 C 0 T 77 s macFas5.chr3 33654559 5 + 192294377 GTGTG i macFas5.chr3 C 0 T 77 s macNem1.NW_012019910v1 4422254 5 - 9440265 GTGTG i macNem1.NW_012019910v1 C 0 T 77 s calJac3.chrUn_GL286444 66931 5 + 138751 GTGTG i calJac3.chrUn_GL286444 C 0 T 76 s saiBol1.JH378296 381912 5 - 2409723 GTGTG i saiBol1.JH378296 C 0 T 76 e colAng1.NW_012117710v1 336763 72 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 66 - 21531802 T e manLeu1.NW_012101810v1 179028 78 - 2515279 T e cerAty1.NW_012002954v1 17012188 78 - 21915920 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=80530.000000 s hg38.chr7_KI270899v1_alt 170191 12 + 190869 CTCCTGTGCATG s panTro5.chr7_NW_015973580v1_random 45633 12 - 83720 CTCCTGTGCATG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560110 12 + 162613886 CTCCTGTGCATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131681 12 - 432965 CTCCTGTGCATG i gorGor5.CYUI01015914v1 T 77 C 0 s nomLeu3.chr20 191023 12 + 85365473 CTCCTGTGCACG i nomLeu3.chr20 T 77 C 0 s rheMac8.chr3 34038536 12 + 185818997 CTCCTGTGCACA i rheMac8.chr3 T 77 C 0 s macFas5.chr3 33654487 12 + 192294377 CTCCTGTGCACA i macFas5.chr3 T 77 C 0 s macNem1.NW_012019910v1 4422182 12 - 9440265 CTCCTGTGCACA i macNem1.NW_012019910v1 T 77 C 0 s cerAty1.NW_012002954v1 17012110 12 - 21915920 CTCCTGTGCACA i cerAty1.NW_012002954v1 T 78 C 0 s manLeu1.NW_012101810v1 178950 12 - 2515279 CTCCTGTGCACA i manLeu1.NW_012101810v1 T 78 C 0 s colAng1.NW_012117710v1 336691 12 + 6586416 CTCCTGTGCACA i colAng1.NW_012117710v1 T 72 C 0 s calJac3.chrUn_GL286444 66860 12 + 138751 CTCCTGTGCACA i calJac3.chrUn_GL286444 T 76 C 0 s saiBol1.JH378296 381841 12 - 2409723 CTCCTGTGCACA i saiBol1.JH378296 T 76 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 66 - 21531802 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=188923.000000 s hg38.chr7_KI270899v1_alt 170203 25 + 190869 GAGGAGGAAACCAAGGCTTCCAGCC s panTro5.chr7_NW_015973580v1_random 45645 25 - 83720 GAGGAGGAAACCAAGGCTTCCAGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560122 25 + 162613886 GAGGAGGAAACCAAGGCTTCCAGCC i panPan2.chr7 C 0 T 154 s gorGor5.CYUI01015914v1 131693 25 - 432965 GAGGAGGAAACCAAGGCTTCCAGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191035 25 + 85365473 GAGGAGGACGCCAAGGTTCCCAGGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038548 25 + 185818997 GAGGAAGAAACCAAGGCTTCCAGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654499 25 + 192294377 GAGGAAGAAACCAAGGCTTCCAGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422194 25 - 9440265 GAGGAAGAAACCAAGGCTTCCAGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012122 25 - 21915920 GAGGAAGAAACCAAGGCTTCCAGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144473 25 - 21531802 GAGGAGGAAACCGAGGCTTCCAGCC i chlSab2.chr28 T 66 C 0 s manLeu1.NW_012101810v1 178962 25 - 2515279 GAGGAAGAAACCAAGGCTTCCAGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336703 25 + 6586416 GAGGAGGAAACCAAGGCTTCCAGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66872 24 + 138751 GAGGAGGAAACC-AGGCTTCCAGCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381853 24 - 2409723 GAGGAGGAAACC-AGGCTTCCAGCC i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=299950.000000 s hg38.chr7_KI270899v1_alt 170228 38 + 190869 CCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCTGTG s panTro5.chr7_NW_015973580v1_random 45670 38 - 83720 CCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCTGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 559993 38 + 162613886 CCGGAGCTCGCAAAGGCAGAGACCCCAGGCTCCCTGTG i panPan2.chr7 T 154 C 0 s gorGor5.CYUI01015914v1 131718 38 - 432965 CCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCTGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191060 38 + 85365473 CTGGAGCTCGCAAGGACAGAGACCCCAGGCTCCCTGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038573 38 + 185818997 CCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCTGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654524 38 + 192294377 CCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCTGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422219 38 - 9440265 CCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCTGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012147 38 - 21915920 CCGGAGCTGGCAAACGCAGAGACCCCAGGATCCCTGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144498 38 - 21531802 CCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCTGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 178987 38 - 2515279 CCGGAGCTGGCAAACGCAGAGACCCCAGGATCCCTGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336728 38 + 6586416 CCGGAGCTGGCAGACGCAGAGACCCCAGGCTCCCTGTG i colAng1.NW_012117710v1 C 0 T 75 s calJac3.chrUn_GL286444 66896 38 + 138751 CCAGAGCTGGCAAATGCAGAGACCCTAGGCTCCCTGTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381877 38 - 2409723 CCGGAGCTGGCAGATGCAGAGACCCTAGGCTCCCTGTG i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=12438.000000 s hg38.chr7_KI270899v1_alt 170266 2 + 190869 TG s panTro5.chr7_NW_015973580v1_random 45708 2 - 83720 TG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560031 2 + 162613886 TG i panPan2.chr7 C 0 T 77 s gorGor5.CYUI01015914v1 131756 2 - 432965 TG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191098 2 + 85365473 GG i nomLeu3.chr20 C 0 T 77 s rheMac8.chr3 34038611 2 + 185818997 TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654562 2 + 192294377 TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422257 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012185 2 - 21915920 TG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144536 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179025 2 - 2515279 TG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 66934 2 + 138751 TG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381915 2 - 2409723 TG i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 336766 75 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=9100.000000 s hg38.chr7_KI270899v1_alt 170268 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 45710 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 559956 1 + 162613886 C i panPan2.chr7 T 77 C 0 s gorGor5.CYUI01015914v1 131758 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191023 1 + 85365473 C i nomLeu3.chr20 T 77 C 0 s rheMac8.chr3 34038613 1 + 185818997 C i rheMac8.chr3 C 0 T 77 s macFas5.chr3 33654564 1 + 192294377 C i macFas5.chr3 C 0 T 77 s macNem1.NW_012019910v1 4422259 1 - 9440265 C i macNem1.NW_012019910v1 C 0 T 77 s cerAty1.NW_012002954v1 17012187 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 T 77 s chlSab2.chr28 144538 1 - 21531802 C i chlSab2.chr28 C 0 T 66 s manLeu1.NW_012101810v1 179027 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 T 77 s colAng1.NW_012117710v1 336691 1 + 6586416 C i colAng1.NW_012117710v1 T 75 C 0 s calJac3.chrUn_GL286444 66936 1 + 138751 C i calJac3.chrUn_GL286444 C 0 T 76 s saiBol1.JH378296 381917 1 - 2409723 C i saiBol1.JH378296 C 0 T 76 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=73543.000000 s hg38.chr7_KI270899v1_alt 170269 11 + 190869 TCCTGTGCATG s panTro5.chr7_NW_015973580v1_random 45711 11 - 83720 TCCTGTGCATG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 559957 11 + 162613886 TCCTGTGCATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131759 11 - 432965 TCCTGTGCACG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191024 11 + 85365473 TCCTGTGCACG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038537 11 + 185818997 TCCTGTGCACA i rheMac8.chr3 T 77 C 0 s macFas5.chr3 33654488 11 + 192294377 TCCTGTGCACA i macFas5.chr3 T 77 C 0 s macNem1.NW_012019910v1 4422183 11 - 9440265 TCCTGTGCACA i macNem1.NW_012019910v1 T 77 C 0 s cerAty1.NW_012002954v1 17012111 11 - 21915920 TCCTGTGCACA i cerAty1.NW_012002954v1 T 77 C 0 s manLeu1.NW_012101810v1 178951 11 - 2515279 TCCTGTGCACA i manLeu1.NW_012101810v1 T 77 C 0 s colAng1.NW_012117710v1 336692 11 + 6586416 TCCTGTGCACA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66861 11 + 138751 TCCTGTGCACA i calJac3.chrUn_GL286444 T 76 C 0 s saiBol1.JH378296 381842 11 - 2409723 TCCTGTGCACA i saiBol1.JH378296 T 76 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 66 - 21531802 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=457868.000000 s hg38.chr7_KI270899v1_alt 170280 60 + 190869 GAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAAGGCAGAGACCCCAGGCTCCCT s panTro5.chr7_NW_015973580v1_random 45722 60 - 83720 GAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCT i panTro5.chr7_NW_015973580v1_random C 0 T 77 s panPan2.chr7 559968 60 + 162613886 GAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAAGGCAGAGACCCCAGGCTCCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131770 60 - 432965 GAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAACCCAGAGACCCCAGGCTCCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191035 60 + 85365473 GAGGAGGACGCCAAGGTTCCCAGGCCTGGAGCTCGCAAGGACAGAGACCCCAGGCTCCCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038548 60 + 185818997 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654499 60 + 192294377 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422194 60 - 9440265 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012122 60 - 21915920 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGATCCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144473 60 - 21531802 GAGGAGGAAACCGAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCT i chlSab2.chr28 T 66 C 0 s manLeu1.NW_012101810v1 178962 60 - 2515279 GAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGATCCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336703 60 + 6586416 GAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAGACGCAGAGACCCCAGGCTCCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66872 59 + 138751 GAGGAGGAAACC-AGGCTTCCAGCCCCAGAGCTGGCAAATGCAGAGACCCTAGGCTCCCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381853 59 - 2409723 GAGGAGGAAACC-AGGCTTCCAGCCCCGGAGCTGGCAGATGCAGAGACCCTAGGCTCCCT i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=26481.000000 s hg38.chr7_KI270899v1_alt 170340 3 + 190869 GTG s panTro5.chr7_NW_015973580v1_random 45705 3 - 83720 GTG i panTro5.chr7_NW_015973580v1_random T 77 C 0 s panPan2.chr7 560028 3 + 162613886 GTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131830 3 - 432965 GTG i gorGor5.CYUI01015914v1 C 0 T 77 s nomLeu3.chr20 191095 3 + 85365473 GTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038608 3 + 185818997 GTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654559 3 + 192294377 GTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422254 3 - 9440265 GTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012182 3 - 21915920 GTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144533 3 - 21531802 GTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179022 3 - 2515279 GTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336763 3 + 6586416 GTG i colAng1.NW_012117710v1 C 0 T 75 s calJac3.chrUn_GL286444 66931 3 + 138751 GTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381912 3 - 2409723 GTG i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=12438.000000 s hg38.chr7_KI270899v1_alt 170343 2 + 190869 TG s panTro5.chr7_NW_015973580v1_random 45708 2 - 83720 TG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560031 2 + 162613886 TG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131756 2 - 432965 TG i gorGor5.CYUI01015914v1 T 77 C 0 s nomLeu3.chr20 191098 2 + 85365473 GG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038611 2 + 185818997 TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654562 2 + 192294377 TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422257 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012185 2 - 21915920 TG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144536 2 - 21531802 TG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179025 2 - 2515279 TG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 66934 2 + 138751 TG i calJac3.chrUn_GL286444 C 0 T 76 s saiBol1.JH378296 381915 2 - 2409723 TG i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 336766 75 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=9100.000000 s hg38.chr7_KI270899v1_alt 170345 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 45710 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560033 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131758 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191100 1 + 85365473 C i nomLeu3.chr20 C 0 T 77 s rheMac8.chr3 34038613 1 + 185818997 C i rheMac8.chr3 C 0 T 77 s macFas5.chr3 33654564 1 + 192294377 C i macFas5.chr3 C 0 T 77 s macNem1.NW_012019910v1 4422259 1 - 9440265 C i macNem1.NW_012019910v1 C 0 T 77 s cerAty1.NW_012002954v1 17012187 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 T 2 s chlSab2.chr28 144538 1 - 21531802 C i chlSab2.chr28 C 0 T 2 s manLeu1.NW_012101810v1 179027 1 - 2515279 C i manLeu1.NW_012101810v1 C 0 T 2 s colAng1.NW_012117710v1 336691 1 + 6586416 C i colAng1.NW_012117710v1 T 75 C 0 s calJac3.chrUn_GL286444 66860 1 + 138751 C i calJac3.chrUn_GL286444 T 76 C 0 s saiBol1.JH378296 381917 1 - 2409723 C i saiBol1.JH378296 C 0 T 76 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=339821.000000 s hg38.chr7_KI270899v1_alt 170346 74 + 190869 TCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCCCCAGAGCTCGCAAAGGCAGAGACCCCAGGCTCCCTGTG s panTro5.chr7_NW_015973580v1_random 45711 74 - 83720 TCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCTGTG i panTro5.chr7_NW_015973580v1_random C 0 T 154 s panPan2.chr7 560034 74 + 162613886 TCCTGTGCACGGAGGAGGAAACCAAGGCTTCCAGCCCCAGAGCTCGCAAACACAGAGACCCCAGGCTCCCTGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131759 74 - 432965 TCCTGTGCACGGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTCGCAAACCCAGAGACCCCAGGCTCCCTGTG i gorGor5.CYUI01015914v1 C 0 T 152 s nomLeu3.chr20 191024 74 + 85365473 TCCTGTGCACGGAGGAGGACGCCAAGGTTCCCAGGCCTGGAGCTCGCAAGGACAGAGACCCCAGGCTCCCTGTG i nomLeu3.chr20 T 77 C 0 s rheMac8.chr3 34038537 74 + 185818997 TCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCTGTG i rheMac8.chr3 T 77 C 0 s macFas5.chr3 33654488 74 + 192294377 TCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCTGTG i macFas5.chr3 T 77 C 0 s macNem1.NW_012019910v1 4422183 74 - 9440265 TCCTGTGCACAGAGGAAGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAAACGCAGAGACCCCAGGCTCCCTGTG i macNem1.NW_012019910v1 T 77 C 0 s colAng1.NW_012117710v1 336692 74 + 6586416 TCCTGTGCACAGAGGAGGAAACCAAGGCTTCCAGCCCCGGAGCTGGCAGACGCAGAGACCCCAGGCTCCCTGTG i colAng1.NW_012117710v1 C 0 T 3 s calJac3.chrUn_GL286444 66861 73 + 138751 TCCTGTGCACAGAGGAGGAAACC-AGGCTTCCAGCCCCAGAGCTGGCAAATGCAGAGACCCTAGGCTCCCTGTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381842 73 - 2409723 TCCTGTGCACAGAGGAGGAAACC-AGGCTTCCAGCCCCGGAGCTGGCAGATGCAGAGACCCTAGGCTCCCTGTG i saiBol1.JH378296 T 76 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 2 - 21531802 T e manLeu1.NW_012101810v1 179028 2 - 2515279 T e cerAty1.NW_012002954v1 17012188 2 - 21915920 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=5908.000000 s hg38.chr7_KI270899v1_alt 170420 2 + 190869 TG s panTro5.chr7_NW_015973580v1_random 45631 2 - 83720 TG i panTro5.chr7_NW_015973580v1_random T 154 C 0 s panPan2.chr7 560108 2 + 162613886 TG i panPan2.chr7 C 0 C 0 s nomLeu3.chr20 191098 1 + 85365473 -G i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 34038611 2 + 185818997 TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654562 2 + 192294377 TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422257 2 - 9440265 TG i macNem1.NW_012019910v1 C 0 C 0 s calJac3.chrUn_GL286444 66934 2 + 138751 TG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381915 2 - 2409723 TG i saiBol1.JH378296 C 0 C 0 e colAng1.NW_012117710v1 336766 3 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 2 - 21531802 T e manLeu1.NW_012101810v1 179028 2 - 2515279 T e cerAty1.NW_012002954v1 17012188 2 - 21915920 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C e gorGor5.CYUI01015914v1 131833 152 - 432965 T a score=4500.000000 s hg38.chr7_KI270899v1_alt 170422 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 45633 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560110 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131681 1 - 432965 C i gorGor5.CYUI01015914v1 T 152 C 0 s nomLeu3.chr20 191100 1 + 85365473 C i nomLeu3.chr20 I 1 T 6 s rheMac8.chr3 34038613 1 + 185818997 C i rheMac8.chr3 C 0 T 2 s macFas5.chr3 33654564 1 + 192294377 C i macFas5.chr3 C 0 T 2 s macNem1.NW_012019910v1 4422259 1 - 9440265 C i macNem1.NW_012019910v1 C 0 T 2 s calJac3.chrUn_GL286444 66936 1 + 138751 C i calJac3.chrUn_GL286444 C 0 T 2 s saiBol1.JH378296 381917 1 - 2409723 C i saiBol1.JH378296 C 0 T 2 e colAng1.NW_012117710v1 336766 3 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 2 - 21531802 T e manLeu1.NW_012101810v1 179028 2 - 2515279 T e cerAty1.NW_012002954v1 17012188 2 - 21915920 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e cebCap1.NW_016107703v1 543539 0 - 2125214 C a score=20790.000000 s hg38.chr7_KI270899v1_alt 170423 36 + 190869 TCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCC s panTro5.chr7_NW_015973580v1_random 45634 36 - 83720 TCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560111 36 + 162613886 TCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCC i panPan2.chr7 C 0 T 77 s gorGor5.CYUI01015914v1 131682 36 - 432965 TCCTGTGCATGGAGGAGGAAACCAAGGCTTCCAGCC i gorGor5.CYUI01015914v1 C 0 C 0 e colAng1.NW_012117710v1 336766 3 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 2 - 21531802 T e manLeu1.NW_012101810v1 179028 2 - 2515279 T e cerAty1.NW_012002954v1 17012188 2 - 21915920 T e macNem1.NW_012019910v1 4422260 2 - 9440265 T e macFas5.chr3 33654565 2 + 192294377 T e rheMac8.chr3 34038614 2 + 185818997 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e saiBol1.JH378296 381918 2 - 2409723 T e cebCap1.NW_016107703v1 543539 0 - 2125214 C e calJac3.chrUn_GL286444 66937 2 + 138751 T e nomLeu3.chr20 191101 6 + 85365473 T a score=18439.000000 s hg38.chr7_KI270899v1_alt 170459 35 + 190869 CCAGAGCTCGCAAAGGCAGAGACCCCAGGCTCCCC s panTro5.chr7_NW_015973580v1_random 45670 35 - 83720 CCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCT i panTro5.chr7_NW_015973580v1_random C 0 I 77 s panPan2.chr7 560070 35 + 162613886 CCAGAGCTCGCAAACACAGAGACCCCAGGCTCCCT i panPan2.chr7 T 77 I 156 s gorGor5.CYUI01015914v1 131718 35 - 432965 CCGGAGCTCGCAAACGCAGAGACCCCAGGCTCCCT i gorGor5.CYUI01015914v1 C 0 I 77 e colAng1.NW_012117710v1 336766 3 + 6586416 T e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 2 - 21531802 T e manLeu1.NW_012101810v1 179028 2 - 2515279 T e cerAty1.NW_012002954v1 17012188 2 - 21915920 T e macNem1.NW_012019910v1 4422260 2 - 9440265 T e macFas5.chr3 33654565 2 + 192294377 T e rheMac8.chr3 34038614 2 + 185818997 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e saiBol1.JH378296 381918 2 - 2409723 T e cebCap1.NW_016107703v1 543539 0 - 2125214 C e calJac3.chrUn_GL286444 66937 2 + 138751 T e nomLeu3.chr20 191101 6 + 85365473 T a score=4740.000000 s hg38.chr7_KI270899v1_alt 170494 4 + 190869 GTGG s panTro5.chr7_NW_015973580v1_random 45782 4 - 83720 GTGG i panTro5.chr7_NW_015973580v1_random I 77 C 0 s panPan2.chr7 560261 4 + 162613886 GTGG i panPan2.chr7 I 156 C 0 s gorGor5.CYUI01015914v1 131830 4 - 432965 GTGG i gorGor5.CYUI01015914v1 I 77 C 0 s nomLeu3.chr20 191095 4 + 85365473 GTGG i nomLeu3.chr20 T 6 C 0 s colAng1.NW_012117710v1 336763 4 + 6586416 GTGC i colAng1.NW_012117710v1 T 3 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e chlSab2.chr28 144539 2 - 21531802 T e manLeu1.NW_012101810v1 179028 2 - 2515279 T e cerAty1.NW_012002954v1 17012188 2 - 21915920 T e macNem1.NW_012019910v1 4422260 2 - 9440265 T e macFas5.chr3 33654565 2 + 192294377 T e rheMac8.chr3 34038614 2 + 185818997 T e aotNan1.NW_018514293v1 128599 0 + 376347 C e saiBol1.JH378296 381918 2 - 2409723 T e cebCap1.NW_016107703v1 543539 0 - 2125214 C e calJac3.chrUn_GL286444 66937 2 + 138751 T a score=400696.000000 s hg38.chr7_KI270899v1_alt 170498 43 + 190869 GCCAGGACCACTGGCCTTTCCCTCCGCTGCTTGGGGCGTCCTG s panTro5.chr7_NW_015973580v1_random 45786 43 - 83720 GCCAGGACCACTGGCCTTTCCCTCCGCTGCTTGGGGCATCCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560265 43 + 162613886 GCCAGGACCACTGGCCTTTCCCTCCGCTGCTTGGGGCATCCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131834 43 - 432965 GCCAGGACCACTGGCCTTTCCCTCCACTGCTTGGGGCGTCCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191099 39 + 85365473 GCCAGGACCACTGGCCTTTCCT----CTGCTTGGGGCATCCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038612 43 + 185818997 GCCTGGACCGCTGGCCTTTCCCTCTGCTGCCTGGGGCGTCCTG i rheMac8.chr3 T 2 C 0 s macFas5.chr3 33654563 43 + 192294377 GCCTGGACCGCTGGCCTTTCCCTCTGCTGCCTGGGGCGTCCTG i macFas5.chr3 T 2 C 0 s macNem1.NW_012019910v1 4422258 43 - 9440265 GCCTGGACCGCTGGCCTTTCCCTCTGCTGCCTGGGGCGTCCTG i macNem1.NW_012019910v1 T 2 C 0 s cerAty1.NW_012002954v1 17012186 43 - 21915920 GCCCGGACCGCTGGCCTTTCCCTCTGCTGCCTGGGGCGTCCTG i cerAty1.NW_012002954v1 T 2 C 0 s chlSab2.chr28 144537 43 - 21531802 GCCCCGACCGCTGGCTGTTTCCTCTGCCGCTTGGGGCGTCCTG i chlSab2.chr28 T 2 C 0 s manLeu1.NW_012101810v1 179026 43 - 2515279 GCCCGGACCGCTGGCCTTTCCCTCTGCTGCCTGGGGTGTCCTG i manLeu1.NW_012101810v1 T 2 C 0 s colAng1.NW_012117710v1 336767 42 + 6586416 GCCCGGACCACTGGC-TTTCCCTCTGCTGCCTGGGGCGTCCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66935 43 + 138751 GCCAGGACCACCGGCCTTGCCCTCTGCTACTTGGGGCATCCTG i calJac3.chrUn_GL286444 T 2 C 0 s saiBol1.JH378296 381916 43 - 2409723 GCCAGGACCACTGGCCTTGCCCTCTGCTGCTTGGGGCATCCTG i saiBol1.JH378296 T 2 C 0 s cebCap1.NW_016107703v1 543539 43 - 2125214 GCCAGGACCACTGGCCTTGCCCTCTGCTGCTTGGGGCATCCTG i cebCap1.NW_016107703v1 C 0 I 156 s aotNan1.NW_018514293v1 128599 43 + 376347 GCCAGGACCACTGGCCTTGCCCTCTTCTGCTTGGGGTATCCTG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I a score=19765.000000 s hg38.chr7_KI270899v1_alt 170541 3 + 190869 CAG s panTro5.chr7_NW_015973580v1_random 45829 3 - 83720 CAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560308 3 + 162613886 CAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131877 3 - 432965 CAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191138 3 + 85365473 CAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038655 3 + 185818997 AAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654606 3 + 192294377 AAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422301 3 - 9440265 AAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012229 3 - 21915920 AAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144580 3 - 21531802 CAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179069 3 - 2515279 AAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336809 3 + 6586416 CAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66978 3 + 138751 CAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381959 3 - 2409723 CAG i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 128642 3 + 376347 CAG i aotNan1.NW_018514293v1 C 0 I 21 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e cebCap1.NW_016107703v1 543582 156 - 2125214 I a score=262602.000000 s hg38.chr7_KI270899v1_alt 170544 46 + 190869 TACCGGGCTCAGGGATGGAACCCTCACGCGGAGCCAGGACGAGCAG s panTro5.chr7_NW_015973580v1_random 45832 46 - 83720 TACCGGGCTCAGGGATGGAACCCTCATGCGGAGCCAGGACGAGCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560311 46 + 162613886 TACCGGGCTCAGGGATGGAACCCTCATGCGGAGCCAGGACGAGCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131880 46 - 432965 TACCGGGCTCAGGGATGGAACCCGCACGCGGAGCCAGGACGAGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191141 46 + 85365473 TACCAGGCTCAGGGATGGAACCCGCACGCAGAGCCAGGACAAGCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038658 46 + 185818997 TACCGGGCTCGGGGGTGGAACCCGCACGTGGAACCAGGACAAGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654609 46 + 192294377 TACCGGGCTCGGGGGTGGAACCCGCACGTGGAACCAGGACAAGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422304 46 - 9440265 TACCGGGCTCGGGGGTGGAACCCGCACGTGGAACCAGGACAAGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012232 46 - 21915920 TACCGGGCTCGGGGGTGGAACCCGCACGTGGAACCAGGACAAGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144583 46 - 21531802 TACCGGGCTCGGGGGTGGAACCCGCACATGGAACCAGGACAAGCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179072 46 - 2515279 TACCGGGCTCGGGGGTGGAACCCGCACGTGGAACCAGGACAAGCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336812 46 + 6586416 GACCGGGCTGAGGGGTGGAACCCGCACGTGGAACCAGGACAAGCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 66981 21 + 138751 ------------------------CATGTGGAACCTGGACAGGCA- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381962 21 - 2409723 ------------------------TACGTGGAGCCTGGACAGGCA- i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e aotNan1.NW_018514293v1 128645 21 + 376347 I e cebCap1.NW_016107703v1 543582 156 - 2125214 I a score=385052.000000 s hg38.chr7_KI270899v1_alt 170590 51 + 190869 GCCACACAGAGGGAATGCCGACCACGTCCCTGAAGCCACAGTGGTGAGGAG s panTro5.chr7_NW_015973580v1_random 45878 51 - 83720 GCCACACGGAGGGAACGCCGACCACGTCACTGAAGCCACAGTGGTGAGGAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560357 51 + 162613886 GCCACACGGAGGGAACGCCGACCACGTCACTGAAGCCACAGTGGTGAGGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131926 51 - 432965 GCCACACGGAGGGAATGCCGACCACGTCCCTGAAGCCACAGTGGTGAGGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191187 51 + 85365473 GCCACACGGAGGGAACGCCGACCACGTCCCTGAAGCCACGGTGGTGAGGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038704 50 + 185818997 GCCACACGGAGGG-ACGCTGACCACGTCCCTGAAGCTGCAGTGGCGAGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654655 50 + 192294377 GCCACACGGAGGG-ACGCTGACCACGTCCCTGAAGCTGCAGTGGCGAGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422350 50 - 9440265 GCCACACGGAGGG-ACGCTGACCACGTCCCTGAAGCTGCAGTGGCGAGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012278 50 - 21915920 GCCACACGGAGGG-ACGCTGACCACGTCCCTGAAGCTGCAGTGGCGAGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144629 51 - 21531802 GCCCCACGGAGGGAACGCTGACCACGTCCCTGAGGCTGCAGTGGTGAGGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179118 50 - 2515279 GCCACACGGAGGG-ACGCTGACCACGTCCCTGAAGCTGCAGTGGCGAGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336858 51 + 6586416 GCCACACGGAGGGAATGCCGACCATGTCCCTGAGGCTGCAGTGGTGAGGAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67002 51 + 138751 GCCACACAGAGGGAATGCCAGGCATGCCCCCAAAGCAGCAATGGTGAGGAA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 381983 51 - 2409723 GCCACACAGTGGGAACCCCGGGCGCACCCCTGAAGCAGAAATGGTGAAGAA i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 128666 51 + 376347 GCCACACGGAGGGAACGCCGGGCACGCCCCTGAAGCAGCAATGGGGAGGAA i aotNan1.NW_018514293v1 I 21 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e canFam3.chr6 61059435 758 - 77573801 I e cebCap1.NW_016107703v1 543582 156 - 2125214 I a score=343134.000000 s hg38.chr7_KI270899v1_alt 170641 52 + 190869 GGGACTGTGCACTTCAGTGTGAGGTCGGGAAGGCAG---CGTCCTGCTC-GGATTG- s panTro5.chr7_NW_015973580v1_random 45929 52 - 83720 GGGACTGTGCACTTCAGTGTGAGGTCGGGAAGGCAG---CGTCCTGCTC-GGATTG- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560408 52 + 162613886 GGGACTGTGCACTTCAGTGTGAGGTCGGGAAGGCAG---CGTCCTGCTC-GGATTG- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 131977 52 - 432965 GGGACTGTGCACTTCAGTGTGAGGTCGGGAAGGCAG---CGTCCTGCTC-AGATTG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191238 52 + 85365473 CGGACTGTGCACTTCAGAGTGAGGTCGGGAAGGCAG---CGTCCTGCTC-AGATTG- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038754 49 + 185818997 GGGACTG---ACTTCAGTGTGAGCTCAGGAAGGCAG---CGTCCGGCTC-GGATTT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654705 49 + 192294377 GGGACTG---ACTTCAGTGTGAGCTCAGGAAGGCAG---CGTCCGGCTC-GGATTT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422400 49 - 9440265 GGGACTG---ACTTCAGTGTGAGCTCAGGAAGGCAG---CGTCCGGCTC-GGATTT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012328 49 - 21915920 GGGACTG---ACTTCAGCGTGAGCTCAGGAAGGCAG---CGTCCGACTC-GGATTT- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144680 49 - 21531802 GGGACTG---ACTTCAGCGTGAGCTCAGGAAGGCAG---CGTCCGGCTC-GGATTT- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179168 49 - 2515279 GGGACTG---ACTTCAGTGTGAGCTCAGGAAGGCAG---CGTCCGACTC-GGATTT- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336909 49 + 6586416 GGGACTG---ACTTCAGTGTGAGTTCAGGAAGGCAG---CGTCCTGCTC-GGATTT- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67053 51 + 138751 GGACCTGTGTGC-TCAGTGTGAGCTCAGGACAGCAG---CATCATGCTA-GGAGTT- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 382034 51 - 2409723 GGGCCTGTGTGC-TCAGTGTGAGCTCAGAACAGCAA---CGTCATGCTA-GGAGTT- i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 128717 51 + 376347 GGGCCTGTGTGC-TCAGTGTGAGCTCAGGACAGCAG---CGTCATGCTC-GGAGTT- i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61060193 54 - 77573801 GGGAGTGT--GCATGAGTGCAAGTTCAG-AGGGCAGGCTAGACATACGCTGGATTTG i canFam3.chr6 I 758 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C e cebCap1.NW_016107703v1 543582 156 - 2125214 I a score=13984.000000 s hg38.chr7_KI270899v1_alt 170693 2 + 190869 -TA s panTro5.chr7_NW_015973580v1_random 45981 2 - 83720 -TA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560460 2 + 162613886 -TA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132029 2 - 432965 -TA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191290 2 + 85365473 -TA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038803 2 + 185818997 -TA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654754 2 + 192294377 -TA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422449 2 - 9440265 -TA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012377 2 - 21915920 -TA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144729 2 - 21531802 -TA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179217 2 - 2515279 -TA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336958 2 + 6586416 -TA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67104 2 + 138751 -CA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 382085 2 - 2409723 -TA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 543738 2 - 2125214 -TA i cebCap1.NW_016107703v1 I 156 C 0 s aotNan1.NW_018514293v1 128768 2 + 376347 -TA i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61060247 2 - 77573801 CT- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2272524 0 - 8137123 C a score=1259604.000000 s hg38.chr7_KI270899v1_alt 170695 149 + 190869 GAAACGGGCAGAAACC--CCGACGTGGTCTCTCCTCGGTTTAACCGAGAAGATGCTGAGGCCTGGTATCCACTGTCCTCCCTCCCGAAGGCCAGACTCAAAAGGAGGAAGTACAGGAGGATGGTGCAGCTGGGCTTGTCCCCTCACGGCCC- s panTro5.chr7_NW_015973580v1_random 45983 149 - 83720 GAAACGGGCAGAAACC--CCGACGTGGTCTCTCCTCGGTTTAACTGAGAAGGTGCTGAGGCCTGGTATCCACTGTCCTCCCTCCCGAAGGCCAGACTCAAAAGGAGGAAGTACAGGAGGATGGTGCAGCTGGGCTTGTCCCCTCATGGCCC- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560462 149 + 162613886 GAAACGGGCAGAAACC--CCGACGTGGTCTCTCCTCGGTTTAACTGAGAAGGTGCTGAGGCCTGGTATCCACTGTCCTCCCTCCCGAAGGCCAGACTCAAAAGGAGGAAGTACACGAGGATGGTGCAGCTGGGCTTGTCCCCTCACGGCCC- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132031 149 - 432965 GAAACGGGCAGAAACC--CCGAAGTGGTCTCTCCTCAGTTTAACCCAGAAGATGCTGAGGCCTGGTATCCACTGTCCTCCTTCCCAAAGGCCAGACTCAAAAGGAGGAAGTACAGGAGGGTGGTGCAGCTGGGCTTGTCCCCTCACGGCCC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191292 133 + 85365473 GAAACGGGCAGAAACC--CCCACGTGGTCTCTCCTTGGTTTAACCGAGAAGATGCTGAGGCCTGGTATCCACTGCCCTTTCTCCCAAAGCCCAGGCTGAAGAGGAGGCAGTACAGGAGGATGGCGCAGCTGGG----------------CC- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038805 147 + 185818997 GAAATGGACAGAAACC--CCCACGTGGTGTCTCCTTGGTTTAACCGAG-AGATGCTGAGGCCTGGTGTCCTCTACCCTCCCTCCCGCAGGCCAGACTCAAGAGGAGGCAGTGCAGGAGGATGGCACAGCTGGGCCTGTCTCCTCGCGG-CC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654756 147 + 192294377 GAAATGGACAGAAACC--CCCACGTGGTGTCTCCTTGGTTTAACCGAG-AGATGCTGAGGCCTGGTGTCCGCTACCCTCCCTCCCGCAGGCCAGACTCAAGAGGAGGCAGTGCAGGAGGATGGCACAGCTGGGCCTGTCTCCTCGCGG-CC- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422451 147 - 9440265 GAAATGGACAGAAACC--CCCACGTGGTGTCTCCTTGGTTTAACCGAG-AGATGCTGAGGCCTGGTGTCCGCTACCCTCCCTCCCGCAGGCCAGACTCAAGAGGAGGCAGTGCAGGAGGATGGCACAGCTGGGCCTGTCTCCTCGCGG-CC- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012379 147 - 21915920 GAAATGGACAGAAACC--CCCACGTGGTGTCTCCTTGGTTTAACCGAG-AGATGCTGAGGCCTGGTGTCCGCTACCCTCCCTCCCGCAGGCCAGACTCAAGAGGAGGCAGTGCAGGAGGATGGCACAGCTGGGCCTGTCTCCTCGCGG-CC- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144731 118 - 21531802 GAAATGGACAGAAACC--CC------------------------------GACACTGAGGCCTGGTGTCCGCTGCCCTCCCTCCCGCAGGCCAGACTCAAGAGGAGGCAGTGCAGGAGGATGGCACAGCTGGGCCTGTCCCCTCACGG-CC- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179219 147 - 2515279 GAAATGGACAGAAACC--CCCACGTGGTGTCTCCTTGGTTTAACCGAG-AGATGCTGAGGCCTGGTGTCCGCTACCCTCCCTCCCGCAGGCCAGACTCAAGAGGAGGCAGTGCAGGAGGATGGCACAGCTGGGCCTGTCTCCTCGCGG-CC- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 336960 146 + 6586416 GAAATGGGTAGAAACC--CCCACGTGGTGTCTCCTTGGTTTAACCCAG-AGATGCTGAGGCCTGGTGTCCACTGCCCT-CCTCCCGAAGGCCAGACTCAGGAGGAGGCAGTGCAGGAGGATGGCACAGCTGGGCCTGTCCCCTCGTGG-CC- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67106 129 + 138751 GAA--------------------ATGATCTCTCCTCATTTTAACCGAGAAGATTCTGAGGCCCGG-ATCCACTGCCCTCCCTCCCAAAGGCCAGACTCAAGAGGAGGCAGTGCAGGAGGATGTTGCAGCTGGGCCTGTCTCCTCACAG-CT- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 382087 147 - 2409723 GAAATGGGCAGAACCC--CCCACATGATCTCTCCACGTTTTAACCAAGAAGATTCTGAGGCCCGG-ATCCACTGCCCTCCCTCCCAAAGGCCAGACTCAAGAGGAGGCAGTGGAGGAGGATGGTACAGCTGGGCCTGTCTCCTCACGG-CC- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 543740 147 - 2125214 GAAATGGGCAGAACCC--CCAACATGATCTCTCCTTGTTTTAACTGAGAAGATTCTGAGGCCCGG-ATCCACTGCCCTTCCTCCCAAAGGCCAGACTCAAGAGAAGGCAGTGCAGGAGGATGGTACAGCTGGGCCTGTCTCCTCACGG-CC- i cebCap1.NW_016107703v1 C 0 I 69 s aotNan1.NW_018514293v1 128770 149 + 376347 TAAATGGGCAGAACCCCGCCCCCACGATCTCCCCTCATTTTAACTGAGAAGATTCTGGGGCCCAG-ATCCACTGCCCTCCCTCCCAAAGGCCAGATTCAGGAGAAGGCCGTGCAGGAGGATGGTACAGCCGGGCCTGTCTCCTCACGG-CC- i aotNan1.NW_018514293v1 C 0 I 121 s otoGar3.GL873611 2272524 135 - 8137123 GAAATAGACAGAAACC--AGCACATGGTTGCTTCTTGTTTTGACCAAGGAGATTCAGTACCCAGA-GTCCACTGTTCTCC--CCCAAAGGCCAGCCTCAGAAGAAA-------AGGATGGCTGTTCAGCTGG---CTTCCTCTCATGG-CC- i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61060249 117 - 77573801 ------GGGATGAACC--CCCCTGTGACGGCTCTTCTTTCCAACTGAGAAGACTCTGAGGTTGAG-GCCCTCTTTCCTC---CTGGAAGGTCAG------------------CAGTGGAAGGTCCCCACTG----TCCACTCTCACGG-CCC i canFam3.chr6 C 0 C 0 a score=245875.000000 s hg38.chr7_KI270899v1_alt 170844 34 + 190869 CAGATGCGGCCTCCGCCACGGTGTGGTCTCTGCA s panTro5.chr7_NW_015973580v1_random 46132 34 - 83720 CAGATGCGGCCTCGGCCACAGTGTGGTCTCTGCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560611 34 + 162613886 CAGATGTGGCCTCGGCCACGGTGTGGTCTCTGCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132180 34 - 432965 CAGATGCGGCCTCGGCCATGGTGTGGTCTCTGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191425 34 + 85365473 CCGATGCGGCCTCGGCCACGGTGCGGTCTCTGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34038952 34 + 185818997 CGGATGCGGCGTCGGCCACCGTGTGGTCTCTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654903 34 + 192294377 CGGATGCGGCGTCGGCCACCGTGTGGTCTCTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422598 34 - 9440265 CGGATGCGGCGTCGGCCACCGTGTGGTCTCTGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012526 34 - 21915920 CGGATGCGGCGTCGGCCACCATGTGGTCTCTGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144849 34 - 21531802 CGGATGCGGCGTCAGCCACCGTGTGGTCTCTGCA i chlSab2.chr28 C 0 I 13 s manLeu1.NW_012101810v1 179366 34 - 2515279 CGGATGCGGCGTCGGCCACCATGTGGTCTCTGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337106 34 + 6586416 CGGAGGCAGCATCGGCCACAGTGTGGTCTCTGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67235 34 + 138751 CGGACATGGCATTGGCCAAGGTGCAGTCTTTGCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 382234 34 - 2409723 CGGACATGGCGTTGGCCAGGGTGCAGTCTCTGCA i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2272660 33 - 8137123 CAGGTATGGCCGT-GCCATGGTGGGGTCCCTTTG i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61060366 33 - 77573801 TGGATGTGACCCTAACTCTGAAG-GGTCTCTGCT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 128919 121 + 376347 I e cebCap1.NW_016107703v1 543887 69 - 2125214 I a score=92534.000000 s hg38.chr7_KI270899v1_alt 170878 22 + 190869 -----TGCAGGCCCCTCCATGCTGCAA s panTro5.chr7_NW_015973580v1_random 46166 22 - 83720 -----TGCAGGCCCCTCCGTGCTGCAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560645 22 + 162613886 -----TGCAGGCCCCTCCGTGCTGCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132214 22 - 432965 -----TGCAGGCCCCTCCGCACTGCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191459 22 + 85365473 -----TGCAGATGGGTGGGCTCTGCAA i nomLeu3.chr20 C 0 I 12 s rheMac8.chr3 34038986 22 + 185818997 -----TGCGGGCGGGTGGGCTCTGCAA i rheMac8.chr3 C 0 I 12 s macFas5.chr3 33654937 22 + 192294377 -----TGCGGGCGGGTGGGCTCTGCAA i macFas5.chr3 C 0 I 12 s macNem1.NW_012019910v1 4422632 22 - 9440265 -----TGCGGGCGGGTGGGCTCTGCAA i macNem1.NW_012019910v1 C 0 I 12 s cerAty1.NW_012002954v1 17012560 22 - 21915920 -----TGCGGGCGGGTGGGCTCTGCAA i cerAty1.NW_012002954v1 C 0 I 12 s manLeu1.NW_012101810v1 179400 22 - 2515279 -----TGCGGGCGGGTGGGCTCTGCAA i manLeu1.NW_012101810v1 C 0 I 12 s colAng1.NW_012117710v1 337140 22 + 6586416 -----TGCAGGCGGGTGGGCTCTGCAA i colAng1.NW_012117710v1 C 0 I 12 s calJac3.chrUn_GL286444 67269 22 + 138751 -----CGCAGGCCCATCTGCTCTGCAA i calJac3.chrUn_GL286444 C 0 I 12 s saiBol1.JH378296 382268 22 - 2409723 -----CACAGGCCCATCTGCTCTGCAA i saiBol1.JH378296 C 0 I 12 s otoGar3.GL873611 2272693 22 - 8137123 -----TCCAGGGCTACCTGCCCTGCAG i otoGar3.GL873611 C 0 I 13 s canFam3.chr6 61060399 27 - 77573801 TACCCCTCCCCACCGCCCTCTCTACAG i canFam3.chr6 C 0 C 0 e chlSab2.chr28 144883 13 - 21531802 I e aotNan1.NW_018514293v1 128919 121 + 376347 I e cebCap1.NW_016107703v1 543887 69 - 2125214 I a score=12000.000000 s hg38.chr7_KI270899v1_alt 170900 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 46188 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560667 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132236 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191493 1 + 85365473 G i nomLeu3.chr20 I 12 C 0 s rheMac8.chr3 34039020 1 + 185818997 G i rheMac8.chr3 I 12 C 0 s macFas5.chr3 33654971 1 + 192294377 G i macFas5.chr3 I 12 C 0 s macNem1.NW_012019910v1 4422666 1 - 9440265 G i macNem1.NW_012019910v1 I 12 C 0 s cerAty1.NW_012002954v1 17012594 1 - 21915920 G i cerAty1.NW_012002954v1 I 12 C 0 s chlSab2.chr28 144896 1 - 21531802 G i chlSab2.chr28 I 13 C 0 s manLeu1.NW_012101810v1 179434 1 - 2515279 G i manLeu1.NW_012101810v1 I 12 C 0 s colAng1.NW_012117710v1 337174 1 + 6586416 G i colAng1.NW_012117710v1 I 12 C 0 s calJac3.chrUn_GL286444 67303 1 + 138751 G i calJac3.chrUn_GL286444 I 12 C 0 s saiBol1.JH378296 382302 1 - 2409723 G i saiBol1.JH378296 I 12 C 0 s otoGar3.GL873611 2272728 1 - 8137123 G i otoGar3.GL873611 I 13 C 0 s canFam3.chr6 61060426 1 - 77573801 G i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 128919 121 + 376347 I e cebCap1.NW_016107703v1 543887 69 - 2125214 I a score=50010.000000 s hg38.chr7_KI270899v1_alt 170901 9 + 190869 -AGGTGGCGG---------- s panTro5.chr7_NW_015973580v1_random 46189 9 - 83720 -AGGTGGCAG---------- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560668 9 + 162613886 -AGGTGGCGG---------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132237 9 - 432965 -AGGTGGCGG---------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191494 8 + 85365473 -AGATGGC-G---------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039021 9 + 185818997 -AGAGGGCGG---------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654972 9 + 192294377 -AGAGGGCGG---------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422667 9 - 9440265 -AGAGGGCGG---------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012595 9 - 21915920 -AGAGGGCGG---------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144897 9 - 21531802 -AGAGGGCGG---------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179435 9 - 2515279 -AGAGGGCGG---------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337175 9 + 6586416 -AGGGGGCGG---------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67304 9 + 138751 -AGATGGCAA---------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 382303 9 - 2409723 -AGATGGCAA---------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 543956 9 - 2125214 -AGATGGCAA---------- i cebCap1.NW_016107703v1 I 69 C 0 s otoGar3.GL873611 2272729 9 - 8137123 -AGACAACAG---------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61060427 20 - 77573801 GCCATGGTGGGGACACACGG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 128919 121 + 376347 I a score=853648.000000 s hg38.chr7_KI270899v1_alt 170910 101 + 190869 GCTCTGGGGCCGCATCGCACCCCC---------------------GATTCGTGTCCTCCAGCCT--GTTTCCTCGCCTTAGGT-GGGACGCGATCACCCGCCTGCGGGGAGTCTTGCTGCCGTG-C s panTro5.chr7_NW_015973580v1_random 46198 101 - 83720 GCCCTGGGGCCGCATTGCACCCCC---------------------GATTCGTGTCCTCCAGCCT--GTTTCCTCATCTTAGGT-GGGACGCGATCACCCACCTGCGGGGAGTCTTGCTGCCGTG-C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560677 101 + 162613886 GCCCTGGGGCCGCATTGCACCCCC---------------------GATTCGTGTCCTCCAGCCT--GTTTCCTCGTCTTAGGT-GGGACGCGATCACCCGCCTGCGGGGAATCTTGCTGCCGTG-C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132246 101 - 432965 GCTCT-GGGTCGCGTCGCACCCCC---------------------GATTCATGTCCTTCAGCCT--GTTTCCTCGCCTTAGGTGGGGACGCGATCACCCGCCTGCGGGGAGTCTTGCTGCCGCG-C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191502 100 + 85365473 GCTCTGGGGCCGCATCGCACCCCG---------------------GATTCGTGTCCTCCAGCCT--GTCTCCTCGCCTTAGGT-GGGACGCGATCA-CCACCTGCGGGGTGTCTTGCTGCTGCG-C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039030 100 + 185818997 GCGCTGGGGCCACATCGCACCCCT---------------------GATTCGTGTCCTCCAGCCT--GTTTCCTTGCCTTACGT-GGGACACAATCA-CCACCTGCGGGGAGTCCTGCTGCTGCA-C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33654981 100 + 192294377 GCGCTGGGGCCACATCGCACCCCT---------------------GATTCGTGTCCTCCAGCCT--GTTTCCTTGCCTTACGT-GGGACACAATCA-CCACCTGCGGGGAGTCCTGCTGCTGCA-C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422676 100 - 9440265 GCGCTGGGGCCACATCGCACCCCT---------------------GATTCGTGTCCTCCAGCCT--GTTTCCTTGCCTTACGT-GGGACACAATCA-CCACCTGCGGGGAGTCCTGCTGCTGCA-C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012604 100 - 21915920 GCGCTGGGGCCGTATCGCACCCCT---------------------GATTCGTGTCCTCCAGCCT--GTTTCCTTGCCTTACGT-GGGACACAATCA-CCACCTGCGGGGAGTCCTGCTGCTGCA-C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 144906 101 - 21531802 GCGCTGGGGCCGCGTCGCACCCCT---------------------GATTCGTGTCCTCCGGCCT--GTTTCCTCGCCTTACGT-GGGACACGATCAGCCACCTGCGGGGAGTCCTGCTGCTGCA-C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179444 100 - 2515279 GCGCTGGGGCCGCATCGCACCCCT---------------------GATTCGTGTCCTCCAGCCT--GTTTCCTTGCCTTACGT-GGGACACAATCA-CCACCTGCGGGGAGTCCTGCTGCTGCA-C i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337184 99 + 6586416 GCTCTGGGGCCGCATCGCACCC------------------------ATTCGTGTTCTCCAGCCT--GTTTCCTCGCCTTACGT-GGGACACGATCACCCACCTGCGGGGATTCTTGCTGCTGTGTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67313 97 + 138751 GCTCTGGGGCTGCATCGCACCC------------------------AATCGTGTCCCCCAGCCT--GTTTCCTCACTTTACAT-GGGACAGAAGAC-CTGCCTGCAGGGGGGCTTGATGCTGTA-C i calJac3.chrUn_GL286444 C 0 I 242 s saiBol1.JH378296 382312 97 - 2409723 GCTCTGGGGCCACATCGCACCC------------------------AGTTGTGTTCCCCAGCCT--GTTTCCTTGCCTTACAC-GGGACAGAAGAC-CTGCCTGCAGGGAGGCTTGATGCTGTG-C i saiBol1.JH378296 C 0 I 2 s cebCap1.NW_016107703v1 543965 97 - 2125214 GCTCTGGGGCCACATCGcaccc------------------------aatcgtgtcccccagcct--gtttccttgccttacgt-gggacagaagac-ctgcctgcagggaggcttgatgccatg-c i cebCap1.NW_016107703v1 C 0 I 2 s aotNan1.NW_018514293v1 129040 97 + 376347 GCTCTGGGGCCACGTCGcaccc------------------------aatcgtgtcccccagcct--gtttcctcgcctcatgt-gggatagaagac-ctgcctgccgggaggcttgatgctgtg-c i aotNan1.NW_018514293v1 I 121 I 2 s otoGar3.GL873611 2272738 124 - 8137123 GCTCTGGGGTCACCTCACACCCATGCTTCCTTGCCATGCACCCTAGATTTGTGtcctcaagcctcagtttcctcatatgcagt-gggacaagattgcccacctgtgggacatatcagtgctgca-t i otoGar3.GL873611 C 0 I 2 s canFam3.chr6 61060447 87 - 77573801 GCTCTGGGGTCATGGTGCACCCAA---------------------GCCTCG---------------GGTCCCTCATCTCAGGC-ACAGTGAGGGCA-TCCCCTGTGGGGTGTCTTGTGACATAG-C i canFam3.chr6 C 0 C 0 a score=613981.000000 s hg38.chr7_KI270899v1_alt 171011 66 + 190869 GACAGTGAGTAGAG--GCCGGGCACAGGCCCACAGCAGGCGCTCAGCAAACGCTCACTCC-CAGGTCCC s panTro5.chr7_NW_015973580v1_random 46299 66 - 83720 GACAGTGAGTAGAG--GCCGGGCACAGGCCCACAGCAGGCGCTCAGCAAACGCTCACTCC-CAGGTCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560778 66 + 162613886 GACAGTGAGTAGAG--GCCGGGCACAGGCCCACAGCAGGCGCTCAGCAAACGCTCACTCC-CAGGTCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132347 65 - 432965 GACAGTGAGTAGAG--GCCGGGCACAGGCCCACAGCAGGCGCTCAGCCAACGCTCACT-C-CAGGTCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191602 65 + 85365473 GACAGTGAGTAGAG--GCCGCACACAGGCCCACAGCAGGCGCTCAGCAAATGCTCACT-C-CGGGTCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039130 68 + 185818997 GACAGCGAGTAGAGGTGCCCGGCACAGGCACACGGCAGGCACTCGGCCAGCGCTCACTCC-TGGGTCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33655081 68 + 192294377 GACAGCGAGTAGAGGTGCCCGGCACAGGCACACGGCAGGCACTCGGCCAGCGCTCACTCC-TGGGTCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422776 68 - 9440265 GACAGTGAGTAGAGGTGCCCGGCACGGGCACACGGCAGGCACTCGGCCAGCGCTCACTCC-TGGGTCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012704 68 - 21915920 GACAGTGAGTAGAGGTGCCCGGCACGGGCACACGGCAGGCACTCGGCCAGCGCTCACTCC-TGGGTCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 145007 68 - 21531802 GACAGTGAGTAGAGGTGCCCGGCACGGGCACACGGCGGGCACTCAGCCAGCGCTCACTCC-TGGGTCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179544 68 - 2515279 GACAGTGAGTAGAGGTGCCCGGCACGGGCACACGGCAGGCACTCGGCCAGCGCTCACTCC-TGGGTCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337283 68 + 6586416 GACAGTGAGTAGAGGTGCCCGGCACGGGCACATGGCAGGCAGTCAGCCAGCGCTCACTCC-TGGGTCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67652 68 + 138751 GACAGTGATTAGAGGTGCCAGGCACAGGCACACAGCAGGCGCTCAGCAAACGCTCACTCC-CGGGTCCC i calJac3.chrUn_GL286444 I 242 C 0 s saiBol1.JH378296 382411 57 - 2409723 GACAGTGATTAGGGGCGCCGGGCA-----------CAGGCGCTCAGCAAACGCTCATGCC-TGGGTCCC i saiBol1.JH378296 I 2 C 0 s cebCap1.NW_016107703v1 544064 68 - 2125214 gacagtgattagaggtgcccggcacaggcacacagcaggcgctcagcaaacgctcactcC-CGGGTCCC i cebCap1.NW_016107703v1 I 2 C 0 s aotNan1.NW_018514293v1 129139 67 + 376347 gac-gtgatcagaggcgcccggcacaggcacacagcaggcgctcagcaaacgctcactcC-CGGGTCCC i aotNan1.NW_018514293v1 I 2 C 0 s otoGar3.GL873611 2272864 68 - 8137123 gacagggctggaaggtattcagcat-ggcgcatagcatgtgctcaatgaatgCTCAGTCCTCAGGGTCC i otoGar3.GL873611 I 2 C 0 s canFam3.chr6 61060534 62 - 77573801 -----AGAGTGGAGGCACCCAGCCC-CACACCCAGCAGACGCTGAGTACATGCTACCTCC-CAGATCCC i canFam3.chr6 C 0 I 123 a score=93728.000000 s hg38.chr7_KI270899v1_alt 171077 9 + 190869 CGTGTGCCC s panTro5.chr7_NW_015973580v1_random 46365 9 - 83720 CGTGTGCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560844 9 + 162613886 CGTGTGCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132412 9 - 432965 CGTGTGCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191667 9 + 85365473 CGTGCACCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039198 9 + 185818997 CGTGTGCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33655149 9 + 192294377 CGTGTGCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422844 9 - 9440265 CGTGTGCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012772 9 - 21915920 CGTGTGCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 145075 9 - 21531802 TGTGTGCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179612 9 - 2515279 CGTGTGCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337351 9 + 6586416 TGTGTGCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67720 9 + 138751 TGTGTGCCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 382468 9 - 2409723 TGTGTGCCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 544132 9 - 2125214 TGTGTGCCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 129206 9 + 376347 TGTGTGCCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2272932 9 - 8137123 TGTGTCCCC i otoGar3.GL873611 C 0 I 273 e canFam3.chr6 61060596 123 - 77573801 I a score=1103064.000000 s hg38.chr7_KI270899v1_alt 171086 134 + 190869 GTCTAAGAACCGCGAGGCTTCAGGCCTCCAGGAGGTGTCTTGCGGGGGCAGCCGCTCTGACGTCGCCTCTG-CCCACTGTGTCTGGATCCCTCGTGAGGGGCCCCCAGACCAGAGGCAGCCGAAAGGTAGAGTCC s panTro5.chr7_NW_015973580v1_random 46374 134 - 83720 GTCTAAGAACCGCGAGGCTTCAGGCCTCCAGGAGGTGTCTTGCAGGGGCAGCCACTCTGACGTCGCCTCTG-CCCACTGTGTCTGGATCCCTCGTGAGGGGCCCCCAGACCAGAGGCAGCCGAAAGGTAGAGTCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560853 134 + 162613886 GTCTAAGAACCGCGAGGCTTCAGGCCTCCAGGAGGTGTCTTGCAGGGGCAGCCACTCTGACGTCGCCTCTG-CCCACTGTGTCTGGATCCCTCGTGAGGGGCCCCCAGACCAGAGGCAGCCGAAAGGTAGAGTCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132421 134 - 432965 GTCTAAGAACCGCGAGGCTTCAGGCCTCCAGGAGGTGTCTTGCGGGGGCAGCCGCTCTGACGTCGCCTCTG-CCCACTGTGTCTGGATCCCTCGTGAGGGGCCCCCAGACCAGAGGCAGCCGAAAGGTAGAGTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191676 126 + 85365473 GTCCAAGAACCGCAGG--TTCAGGCTTCCAGGGGACGCCTT--CGGGGCAGCCGCTCTGACGTCGCCTCTG-CCCG--GTGTCTGGATCCCTCGTGA-GGGTCCCCAGACCAGAGGCAGCAG-GAGGTGGGGTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039207 128 + 185818997 G----AGAACCACTAAGCTTCAGGCTTCCAAGAGGCGTCTCGCAGGGGCAGTCTCTCTGACCTCGCCTCTG-CC--CCGTGTCTGGATCCCTCGTGCGGGGCCCCCAGACTAGAGGCAGCCGGGAGGTGGAGTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33655158 128 + 192294377 G----AGAACCACTAGGCTTCAGGCTTCCAAGAGGCGTCTCGCAGGGGCAGTCTCTCTGACCTCGCCTCTG-CC--CCGTGTCTGGATCCCTCGTGCGGGGCCCCCAGACTAGAGGCAGCCGGGAGGTGGAGTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422853 128 - 9440265 G----AGAACCACTAGGCTTCAGGCTTCCAAGAGGCGTCTCGCAGGGGCAGTCTCTCTGACCTCGCCTCTG-CC--CCGTGTCTGGATCCCTCGTGCGGGGCCCCCAGACTAGAGGCAGCCGGGAGGTGGAGTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012781 128 - 21915920 G----AGAACCACTAGGCTTCAGGCTTCCAAGAGGCGTCTCGCAGGGGCAGTCTCTCTGACCTTACCTCTG-CC--CCGTGTCTGGATCCCTCGTGCGGGGCCCCCAGACCAGAGGCAGCCGGGAGGTGCAGTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 145084 129 - 21531802 G----AGAACCACTAGGCTTCAGGCCTCCAAGAGGCGTCTCGCAGGGGCCGTCTCTCTGACCTCGCCTCTGCCC--CCGTGTCTGGATCCCTCGTGCGGGGCCCCCAGACCAGAGGCAGCCGGGAGGTGGAGTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179621 128 - 2515279 G----AGAACCACTAGGCTTCAGGCTTCCAAGAGGCGTCTCGCAGGGGCGGTCTCTCTGACCTCGCCTCTG-CC--CCGTGTCTGGATCCCTCGTGCGGGGCCCCCAGACCAGAGGCAGCCGGGAGGTGGAGTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337360 130 + 6586416 G----AGAACCACTAGGCTTCAGGCCTCCAAGAGGCATCTTGCAGGGGCAGTCTCTCTGACCTCGCCTCTG-CCCGCTGTGTCTGGATCCCTCGTGCGGGGCCCCCAGACCAGAGGCAGCCGGGAGGTGGAGTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67729 134 + 138751 ATCTAAGAACAGCCAGGCTTCAGGCCTCCAGCAGGCCTCTTGGTGGGGCAGCCTCTCTGACATGGCCTCTG-CCCCCTGTATCTGGACCCCTTGTGAGTGGACCCCAGACCAGAAGCAGCCGGGAGGTGGAGCCT i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 382477 134 - 2409723 ATCTAAGAACAGCCAGGCTTCAGGCCTCCAGGAGGCCTCTTGGTGGGGCAGCCTCTCTGACGTGGCCTCTG-CCCCCTGTGTCTGGACCCCTTGTGAGAGGTCCCCAGACCAGAAGCAGCTGGGAGGTGGAGCCT i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 544141 134 - 2125214 ATCTAAGAACAGCCAGGCTTCAGGCCTCCAGGAGACCTCTTGGCCGGGCAGCCTCTCTGACGTGGCCTCTG-TCACCTGTGTCTGGACCCCTTGTGAGAAGTCCCCAGACCAGAAGCAGCCGGGAGGTGGAGCCT i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 129215 134 + 376347 ATCTAAGAGCAGCCAGGCTTCAGGCCTCCAGGAGGCCTCTTGGCGGGGCAGCCTCTCTGACGTGGCCTCTG-CCCCCTGTGTCTGGACCCCTTGTGAGGGGTCCCCAGACCAGAAGCAGCCGGGAGGTGGCGCCT i aotNan1.NW_018514293v1 C 0 I 8 e otoGar3.GL873611 2272941 273 - 8137123 I e canFam3.chr6 61060596 123 - 77573801 I a score=87405.000000 s hg38.chr7_KI270899v1_alt 171220 22 + 190869 AGATGCGGAGGGAAAGACGTGA s panTro5.chr7_NW_015973580v1_random 46508 22 - 83720 AGATGCAGAGGGAAAGACGTGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 560987 22 + 162613886 AGATGCGGAGGGAAAGACGTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132555 22 - 432965 AGATGCGGAGGGAAGGACGTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191802 22 + 85365473 AGATGCGGAGGGAGAGACAGGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039335 22 + 185818997 GGACGCGGAGGGAGACACAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33655286 22 + 192294377 GGACGCAGAGGGAGAGACAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4422981 22 - 9440265 GGACGCGGAGGGAGAGACAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012909 22 - 21915920 GGACGCGGAGGGAGAGACAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 145213 22 - 21531802 GGATGTGGGGGGAGAGACAGGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179749 22 - 2515279 GGACGCGGAGGGAGAGACAGGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337490 22 + 6586416 GGACGCGGAGGGAGAGACAGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67864 7 + 138751 ------TGATGGA--------- i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 382612 7 - 2409723 ------TGATGGA--------- i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 544276 7 - 2125214 ------TGATGGA--------- i cebCap1.NW_016107703v1 I 1 C 0 e otoGar3.GL873611 2272941 273 - 8137123 I e canFam3.chr6 61060596 123 - 77573801 I e aotNan1.NW_018514293v1 129349 8 + 376347 I a score=534738.000000 s hg38.chr7_KI270899v1_alt 171242 61 + 190869 TCTCCGAATTCCGTGATGACAGGTGGGCAGCGGCAGCTGGAATTACACACCAGTCCCACAG s panTro5.chr7_NW_015973580v1_random 46530 61 - 83720 TCTCCGAATTCCGTGATGACAGGTGGGCAGCGGCAGCTGGAATTACACACCAGTCCCACAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561009 61 + 162613886 TCTCCGAATTCTGTGATGACAGGTGGGCAGCGGCAGCTGGAATTACACACCAGTCCCACAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132577 61 - 432965 TCTCCGAATTCCGTGATCACAGCTGGGCAGCGGCAGCTGGAATTACACACCAGTCCCACAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 191824 61 + 85365473 TCTCTGAATTCCGTGATCACGGGCGGGCAGCGGCAGCTGGAATTACACACTAGTCCCACAG i nomLeu3.chr20 C 0 I 330 s rheMac8.chr3 34039357 61 + 185818997 TCTCCGAATTCGGTGGTTATGGGTGGACAGTGGCAGCCAGAATTACACACCAGTCCCACAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33655308 61 + 192294377 TCTCCGAATTCAGTGGTTATGGGTGGACAGTGGCAGCCAGAATTACACACCAGTCCCACAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4423003 61 - 9440265 TCTCCGAATTCGGTGGTTATGGGTGGACAGTGGCAGCCAGAATTACACACCAGTCCCACAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012931 61 - 21915920 TCTCCGAATTCGGTGGTTATGGGTGGACAGTGGCAGCCAGAATTACACACCAGTCCCACAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 145235 60 - 21531802 TTTCCGAATTTGGTGATTATGGGTGGACGGCGGCAGCC-GGATTACACACCAGTCCCACAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179771 61 - 2515279 TCTCCGAATTCGGTGGTTATGGGTGGACAGTGGCAGCCAGAATTACACACCAGTCCCACAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337512 61 + 6586416 TCTCCGAATTCAGTGATTATGGGTGGGCAGCGGCAGCCGGAATTACACGCCAGTCCCACAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67871 50 + 138751 TCTCTGAATTCTATGATCATGGGTGGGCAATGACAGCTGGAATTACTCAC----------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 382619 61 - 2409723 TCTCTGAATTCCGTGATTGTGGGTGGGCAGTGACAGCTGGAATTACATACTAGTCCCACAT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 544283 61 - 2125214 TCTCTGAATTCCGTGATCATGGGTGGGCAGTGACACCTGGAATTACACACTAGTCCCACAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 129357 61 + 376347 TCTCTGAATTCCGTGATCGTGGGTGGGCAGTGACAGCTGGAATTACACACTAGTCCCACAG i aotNan1.NW_018514293v1 I 8 C 0 e otoGar3.GL873611 2272941 273 - 8137123 I e canFam3.chr6 61060596 123 - 77573801 I a score=70002.000000 s hg38.chr7_KI270899v1_alt 171303 10 + 190869 CTGTGGTTTT s panTro5.chr7_NW_015973580v1_random 46591 10 - 83720 CTGCTGTTTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561070 10 + 162613886 CTGCGGTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132638 10 - 432965 CTGCGGTTTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 192215 10 + 85365473 CTGCGGTTTT i nomLeu3.chr20 I 330 C 0 s rheMac8.chr3 34039418 10 + 185818997 CGGGGGTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33655369 10 + 192294377 CGGGGGTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4423064 10 - 9440265 CGGGGGTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17012992 10 - 21915920 CGGGGGTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 145295 10 - 21531802 CGGGGGTTTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179832 10 - 2515279 CGGGGGTTTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337573 10 + 6586416 CGGTGGTTTT i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 382680 10 - 2409723 CGGCAGTTTT i saiBol1.JH378296 C 0 I 319 s cebCap1.NW_016107703v1 544344 10 - 2125214 CTGTGGTTTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 129418 10 + 376347 CTGCGGTTTT i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272941 273 - 8137123 I e canFam3.chr6 61060596 123 - 77573801 I e calJac3.chrUn_GL286444 67921 0 + 138751 C a score=3785627.000000 s hg38.chr7_KI270899v1_alt 171313 434 + 190869 AAGCACT----AATATTTTACAGGTAAGAAGCTCCATCTCCCACGGCAGATTGCAACCGTCAGGGTTGTT-AGATTCGTGCGGACCGGACGATGCGTCTAAAGGAAAACGGACCCAGGCAGGAACAGCAGCGGCCG-CCCGAGTGTTGGCAGAAGCAGGCCTGTTGCTGAATTGTGACGTTTGTAGAAATCGCTGTTTTAGCCGCTGTTGGCTCCTCTCA-AGCTCCTGACAGTGATCCCAAGATCTGCTGGGAAGCACCTTCCCCGGCGACTCCTCGGGGACA-CCGGCTCCAGCTGCAGCCTCAAGTGACCCCTTTGCCGGAGTCCAAGAAAAGAGAAGCTGCTTCCGTGGACTCTTCTGTCCCAGATGAAGCCGCAGCGGCAGGAAGTGGTAGCTGGCTGCTCTCAGGGTTTATTTGGTTGGGACAAGAGGTCCCAAAG s panTro5.chr7_NW_015973580v1_random 46601 434 - 83720 AAGCACT----AATATTTTACAGGTAAGAAGCTCCATCTCCCACGGCAGATTGCAACCGTCAGGGTTGTT-AGATTTGTGCGGACCAGATGATGCATCTAAAGGAAAATGGACCCAGGCAGGAACACCAGCGGCCG-CCCGAGTGTTGGCAGAAGCAGGCCTATTGCTGAATTGTGACGTTTGTAGAAATCGCTGTTGTAGCCGCTGTTGGCTCCTCTCA-AGCTCCTGACAGTGATCCCAAGATCTGCCGGGAAGCACCTTCCCTGGCGACTCCTCGGGGACA-CGGGCTCCAGCTGCAGCCTCAAGTGACCCCTTTGCCGGAGTCCAAGAAAAGAGAAGCTGCTTCCGTGGACTCTTCTGTCCCAGATGAAGCCGCAGCGGCAGGAAGTGGTAGTTGGCTGCTCCCAGGGTTTATTTGGTTGGGACAAGAGGTCCCAAAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561080 434 + 162613886 AAGCACA----AATATTTTACAGGTAAGAAGCTCCATCTCCCACGGCAGATTGCAACCGTCAGGGTTGTT-AGATTCGTGCGGACCGGATGATGCATCTAAAGGAAAATGGACCCAGGCAGGAACAGCAGCGGCCG-CCCGAGTGTTGGCAGAAGCAGGCCTGTTGCTGAATTGTGACGTTTGTAGAAATCGCTGTTTTAGCCACTGTTGGCTCCTCTCA-AGCTCCTGACAGTGATCCCAAGATCTGCTGGGAAGCACCTTCCCCGGCGACTCCTCGGGGACA-CCGGCTCCAGCTGCAGCCTCAAGTGACCCCTTTGCTGGAGTCCAAGAAAAGAGAAGCTGCTTCCGTGGACTCTTCTGTCCCAGATGAAGCCGCAGCGGCAGGAAGTGGTAGTTGGCTGCTCCCAGGGTTTATTTGGTTGGGACAAGAGGTCCCAAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 132648 434 - 432965 AAGCACC----AATATTTTACAGGTAAGAAGCTCCATCTCCCACGGCAGATTGC-ACCGTCAGCGTTGTT-AGATTCGTGCGGACCGGACGATGTGTCTAAAGGAAAACGGACCCAGGCAGGAACACCAGCGGCCGCCCCGAGTGTTGGCAGAAGCAGGCCTGTTGCTGAATTGTGATATTTGTAGAAATCGCTGTTGTAGCCGCTGTTGGCTCCTCTCA-AGCTCCTGACAGTGATCCCAAGATCTGCCGGGAAGCACCTTCCCCGGCGACTCCTCGGGGACA-CCGGCTCCAGCTGCAGCCTCAAGTGACCCCTTTGCCGGAGTCCAAGAAAAGAGAAGCTGCTTCCGTGGACTCTTCTGTCCCAGATGAAGCCGCAGCGGCAGGAAGTGGTAGTTGGCTGCTCCCAGGGTTTATTTGGTTGGGACAAGAGGTCCCAAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 192225 432 + 85365473 AAGCACT----AATATTTTACAGGTAAAAAGCTACACTTCCCACGGCAGATAGCAACCGTCAGGGTTGTT-AGATTCATGCGGACCGGACAATGCGTCTAAAGGAAAACAGACCCAGGCAGGAACACCAGCGGCCG-CCCGAGTGTTGGCAGAAGCAGGCCTGTTGCTGAATTGCTACGTTTGTAGAAATCACTGTTTTAGCCGCTGTTGGCTCCCCTCA-AACTCCTGACAGTGATCCGAAGATCTGCCGGGAAGCACCTTCCCCTGCGACTCCTCGGAGACA-CTGGCGCGGGCTGCAGCCTCATGTGACCCCTTTGCCGGAGTCCAAGAAAAGAGAAGCTGCCTCCGTGGA--CTTCTGTCCCTGATGAAGCCGCAGCGGCAGGAAGTGGTAGCTGGCTGCTCCCAGGGTTTATTTGGTTGGGACAAGAGGTCCCAAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039428 430 + 185818997 AAGCACT----AATATTTTACAGGTGAAAAGTTACATCTCCCACGGCAGATAGCCACCATCACGGCTGTT-AGATGCCTGCGGACCGGACGATGCATCTAAAGGAAAACGGACCCAGGCGGGAAGACCAGCGGCCG-CCCGAGTGTTGGCAGAAGCAGGCCTGTTGCTGAATAGTGATGTTTGTAGAAATCGCTGTTTTAGCCACTGTTGGCTCCTCTCA-AACTCCTGAC--CGACCCCAAGAGCTGCCGGGAAGCCCCTTCCCCTGCGACTCCTCAGGGACA-CGGGCTCCGGCTGCAGCCTCAAGTGACCCCTTTGCAGGAGTCCAAGAAAAGAGAAGCTGCTTCTGTGGA--TTTCTGTCCTAGATGAAGCCACAGCGGCAGGAAGTGGTATCTGGCTGCTCCCAGGGTCTGTTTGGCTGGGACAAGAGGTCTCAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33655379 430 + 192294377 AAGCACT----AATATTTTACAGGTGAAAAGCTACATCTCCCACGGCAGATAGCCACCATCACGGCTGTT-AGATGCCTGCGGACCGGACGATGCATCTAAAGGAAAACGGACCCAGGCGGGAAGACCAGCGGCCG-CCCGAGTGTTGGCAGAAGCAGGCCCGTTGCTGAATCGTGATGTTTGTAGAAATCGCTGTTTTAGCCACTGTTGGCTCCTCTCA-AACTCCTGAC--CGACCCCAAGAGCTGCCGGGAAGCCCCTTCCCCTGCGACTCCTCAGGGACA-CGGGCTCCGGCTGCAGCCTCAAGTGACCCCTTTGCAGGAGTCCAAGAAAAGAGAAGCTGCTTCTGTGGA--TTTCTGTCCTAGATGAAGCCACAGCGGCAGGAAGTGGTAGCTGGCTGCTCCCAGGGTCTGTTTGGCTGGGACAAGAGGTCTCAAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4423074 430 - 9440265 AAGCACT----AATATTTTACAGGTGAAAAGCTACATCTCCCACGGCAGATAGCCACCATCACGGCTGTT-AGATGCCTGCGGACCGGACGATGCATCTAAAGGAAAACGGACCCAGGCGGGAAGACCAGCGGCCG-CCCGAGTGTTGGCAGAAGCAGGCCCGTTGCTGAATCGTGATGTTTGTAGAAATCGCTGTTTTAGCCACTGTTGGCTCCTCTCA-AACTCCTGAC--CGACCCCAAGAGCTGCCGGGAAGCCCCTTCCCCTGTGACTCCTCAGGGACA-CGGGCTCCGGCTGCAGCCTCAAGTGACCCCTTTGCAGGAGTCCAAGAAAAGAGAAGCTGCTTCTGTGGA--TTTCTGTCCTAGATGAAGCCACAGCGGCAGGAAGTGGTAGCTGGCTGCTCCCAGGGTCTGTTTCGCTGGGACAAGAGGTCTCAAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17013002 430 - 21915920 AAGCACT----AATATTTTACAGGTGAAAAGCTACATCTCCCACGGCAGATAGCCACCATCACGGCTGTT-AGATGCCTGCGGACCGGACGATGCATCTAAAGGAAAACGGACCCAGGCGGGAAGACCAGCGGCCG-CCGGAGTGTTGGCAGAAGCAGGCCCGTTGCTGAATCGTGACGTTTGTAGAAATCGCTGTTTTAGCCGCTGTCGGCTCCTCTCA-AACTCCTGAC--CGACCCCAAGAGCTGCTGGCAAGCCCCTTCCCCTGCGACTCCTCAGGGACA-CGGGCTCCGGCTGCAGCCTCAAGTGACCCCTTTGCAGGAGTCCAAGAAAAGAGAAGCTGCTTCCGTGGA--TTTCTGTCCCAGATGAAGCCGCAGCGGCAGGAAGTGGTAGCTGGCTGCTCCCAGGGTCTGTTTGGCTGGGACAAGAGGTCTCAAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 145305 434 - 21531802 AAGCACTAATAAATATTTTACAGGTGAAAAGCTACATCTCCCACGGCAGATGGCCACCATCACGGCTGTT-AGATTCCCGCGGACCGGACGATGCATCTAAAGGAAAACGGACCCAGGTGGGAAGACCAGTGGCCG-CCCGAGTGTTGGCAGAAGCAGGCCCGTTGCTGAATCGTGACGTTTGCAGAAATCGCTGTTTTAGCCGCTGTTGGCTCCTCTCA-AACTCCTGAC--CAATCCCAAGAGCTGCCGGGAAGCCCCTTCCCCTGCGACTCCTCGGGCACA-CAGGCTCCGGCTGCAGCCTCAAGTGACCCCTTTGCTGGAGTCCAAGAAAAGAGAAGCTGCTTCCGTGGA--CTTGTGTCCCAGATGAAGCCGCAGCGGCAGGAAGTGGTAGCTGGCTGGTCCCAGGGTCTGTTTGGCTGGGACAAGAGGTCCCAAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 179842 430 - 2515279 AAGCACT----AATATTTTACAGGTGAAAAGCTACATCTCCCACGGCAGATAGCCACCATCACGGCTGTT-AGATGCCTGCGGACCGGACGATGCATCTAAAGGAAAACGGACCCAGGCGGGAAGACCAGCGGCCG-CCGGAGTGTTGGCAGAAGCAGGCCCGTTGCTGAATCGTGACGTTTGTAGGAATCGCTGTTTTAGCCGCTGTTGGCTCCTCTCA-AACTCCTGAC--CGACCCCAAGAGCTGCCGGGAAGCCCCTTCCCCTGCGACTCCTCAGGGACA-CGGGCTCCGGCTGCAGCCTCAAGTGACCCCTTTGCAGGAATCCAAGAAAAGAGAAGCTGCTTCCGTGGA--TTTCTGTCCCAGATGAAGCCGCAGCGGCAGGAAGTGGTAGCTGGCTGCTCCCAGGGTCTGTTTGGCTGGGACAAGAGGTCTCAAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 337583 418 + 6586416 AAGCACC----AATATTTTATAGGTGAAAAGCTACATCTCCCACGGCAGAGAGCCACCATCATGGCTGTT-AGATTCTTGCGGACCGGAAGATGCATCTAAAGGAAAACGGACCCAGGCGGGAAGACCAGCGGCCG-CCTGAGTGTTGGCAGAAGCAGGCCTGTTGCTGAATCGTGACATTTACAGAAATCGCTGTTTTAGCTGCCGTTGG------------CTCCTGAC--TGATCCCAAGAGCTGCCGGGAAGCACCTTCCCCTGCGACTCCTCGGGGACA-CGGGCTCTGGCTGCAGCCTCAAGTGACCCCTTTGCCGGAGTCCAAGAAAAGAGAAGCTGCTTCCGTGGA--CTTCTGTCC-AGATGAAGCCGCAGCAGCAGGAAGTGGTAGCTGGCTGCTCCCAGGGTCTATTTGGCTGGGACAAGAGGTCCCAAAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 67921 410 + 138751 --------------ATTTTATAGATAAAAAGCTACCTCTCCCACAGCAGACAGCAACTGACAAGGTTGTTAAGATTCGTGCATACTGGGCAATGCATCTGAAGGAAATCGGACCCAGGCGGGAACACCAGCGGCAG-CCTAAGTGTTGGCGGAAGCAGGCCTGTTGCTGAATTGTGACATTTGGAGAAATCACTGTTTTAGCTGCTGCTGGCTCCTCTCA-AAGTCCTGA-------CCCAAGAGCTGCTGG-ATGCACCTTCCCTGATGGCT-CTCAGGGACACCAGGCTCTGGTTGCATCCTCAATTGACCCCTTTGTGGGAGTC-----AAAGAAAAGCTGCTTCCATGGA--CTTTGGTCCTAGATGAAGCCACAGTGGCAGGAAGTGGTAGCTGGCTGCTCCCAGGGTTTATTTGGTTGGGACAAGAGATCCCGAAA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 383009 427 - 2409723 AAGAACT----CACATTTTATAGCCAAAAAGCTCCATCTCCCACAGCAGACAGCAACTGGCAAAGTTGTT-AGATTCATGCAGACGGGACAACGCATCTGAAGGAAATCAGACCCAGGCGAGAACACCAGAGGCAG-CCCAGGTGTTGGCGGAAGCAGGCCCGTTGCTGAATTGTGACGTTTGGAGAAATCGCTGTTTTAGCTGCTGCTGGCTCCTCTCAGAAGTCCTGAGAGTGATCCCAAGAGCTGCTGG-AAGCACCTTCCCTGACGACT-CTCAGGGACACCAGGCTCTGGCTGCATCCTCAATTGACCCCTTTGAGGGAGTC-----AAAAAGAAGCCGCTTCCGTGGA--CTTCGGTCCTAGACGAAGCCGCAGTGGCAGGAAGTGGTGGCTGGCTGCTCCCAGGGTTTATTTGGTTGGGACAAGAGGTCCCGAAG i saiBol1.JH378296 I 319 C 0 s cebCap1.NW_016107703v1 544354 426 - 2125214 AAGCACT----CACATTTTATAGCTAAAAAGCTACATCTCCCACAGCAGACAGCAACTAACAAGGTTGTT-AGTTTCATGCAGACTGGACGATGCATCTGAAGGAAATCGGACCCAGGCGAGAACAGCAGCGGCAG-CCCAAGTGTTGGCGAAAGCAGGCCTGTTGCTGAATTGTGACGTTTGGAGAAATCGCTGTTTTAGCTGCTGCTGGCTCCTCTAA-AAGTCCTGACAGTGATCCCAAGAGCTGCTGG-AAGCACCTTCCCTGACGACT-CTCAGGGACACCAGGCTCTGGCTGCATCCTCAATTAACCCCTTTGCAGGAGTC-----AAAGGGAAGCTGCTTCCATGGA--CTTCGGTCCTAGATGAAGCTGCAGTGGCAGGAAGTGGTAGCTGGCTGCTTCCAGGGTTTATTTGGTTGGGACAAGAGGTCCCGAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 129428 393 + 376347 AAGCACT----CACATTTTGTAGCTAAAAGGCTACCTCTCCC-------ACAACAACTGGCAAGGTTTTT-AGATTCATGCAGACTGGACGACGCACCTGAAGGAAATCGGACCCAGGCGAGAACGCCAGCGACGG-CCCAAGTGTCGGCGGAAGCAGGCCTGTTGCTGAATTTTGACGTTTGGAGAAATCACTGTTTTAGCTGCTGCTGGCTCCTCTCA-AAGTCCTGACGGTGATCCCAAGAGCTGCCGG-AAGCACCTTCCCTGACGACT-CTCGGGGACACCGGGCTCTGGCTGCATCCTCGATCGACCCCTTTGCGGGAGTC-----AAAGAGAAGCTGCTTCCGTGGA--CTTCGGTCCTAGACGAAGCCGCGGTGGCGGGAAGTGGC----------------------TTCGGT----ACAAGAGGTCCCGAAG i aotNan1.NW_018514293v1 C 0 C 0 e otoGar3.GL873611 2272941 273 - 8137123 I e canFam3.chr6 61060596 123 - 77573801 I a score=392893.000000 s hg38.chr7_KI270899v1_alt 171747 40 + 190869 CTGTCCTTGGGAAGG-AGCTTAGGCGGGGCTGAGCTGATGT s panTro5.chr7_NW_015973580v1_random 47035 40 - 83720 TTGTCCTTGGGAAGG-AGCTTAGGCGGGGCTGAGCTGATGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561514 40 + 162613886 CTGTCCTTGGGAAGG-AGCTTAGGCGGGGCTGAGCTGATGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133082 40 - 432965 CTGTCCTTGGGAAGG-AGCTTAGGCAGGGCTAAGCTGATGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 192657 35 + 85365473 CTGTCCTTGGGAAGG-AGCTTAGGCGG-----AGCTGATGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039858 40 + 185818997 CTGTCCCTGGGAAGG-AGCTTAGGCGGTGCTGAGCTGATGT i rheMac8.chr3 C 0 I 58 s macFas5.chr3 33655809 40 + 192294377 CTGTCCCTGGGAAGG-AGCTTAGGCGGTGCTGAGCTGATGT i macFas5.chr3 C 0 I 40 s macNem1.NW_012019910v1 4423504 40 - 9440265 CTGTCCCTGGGAAGG-AGCTTAGGCGGTGCTGAGCTGATGT i macNem1.NW_012019910v1 C 0 I 58 s cerAty1.NW_012002954v1 17013432 40 - 21915920 CTGTCCCTGGGAAGG-AGCTTAGGCGGTGCTGAGCTGATGT i cerAty1.NW_012002954v1 C 0 I 59 s chlSab2.chr28 145739 40 - 21531802 CTGTCCCTGGGAAGC-AGCTTCGGCGGTGCTGAGCTGATGT i chlSab2.chr28 C 0 I 4 s manLeu1.NW_012101810v1 180272 40 - 2515279 CTGTCCCTGGGAAGG-AGCTTAGGCAGTGCTGAGCTGATGT i manLeu1.NW_012101810v1 C 0 I 40 s colAng1.NW_012117710v1 338001 40 + 6586416 CTGTCCCTGGGGAGA-AGCTTAGGCAGTGCTGAGCTGGTGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 68331 40 + 138751 CTGTCCTTGGGGAGG-AGCTTAGGCACTGCTGAGTTGATGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 383436 40 - 2409723 CTGTCCTTGGGGAGG-AGCTTAAGCTCTGCTGAGCTGATGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 544780 40 - 2125214 CTGTTCTTGGGGAGG-AGCTTAGGCACTGCTGAGCTAGTGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 129821 40 + 376347 CTGTCCCTGGGGAGG-AGCTTAGGCGCTGCTGAGCTGATGC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2273214 41 - 8137123 CTATCCTTGTGTTGGAAACTTGGGCTGAGCAGAGGTGATGC i otoGar3.GL873611 I 273 I 15 e canFam3.chr6 61060596 123 - 77573801 I a score=9852.000000 s hg38.chr7_KI270899v1_alt 171787 7 + 190869 -GTGCCTC s panTro5.chr7_NW_015973580v1_random 47075 7 - 83720 -GTGCCTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561554 7 + 162613886 -GTGCCTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133122 7 - 432965 -GTGCCTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 192692 7 + 85365473 -GTGCCTC i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33655889 7 + 192294377 -GTGCTGA i macFas5.chr3 I 40 I 11 s manLeu1.NW_012101810v1 180352 7 - 2515279 -GTGCTGA i manLeu1.NW_012101810v1 I 40 I 9 s colAng1.NW_012117710v1 338041 2 + 6586416 ---TC--- i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chrUn_GL286444 68371 7 + 138751 -ATGCCTT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 383476 7 - 2409723 -GTGCCTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 544820 7 - 2125214 -GTGCCTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 129861 7 + 376347 -GTGCCTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2273270 7 - 8137123 GGTCCTG- i otoGar3.GL873611 I 15 C 0 e canFam3.chr6 61060596 123 - 77573801 I e chlSab2.chr28 145779 4 - 21531802 I e cerAty1.NW_012002954v1 17013472 59 - 21915920 I e macNem1.NW_012019910v1 4423544 58 - 9440265 I e rheMac8.chr3 34039898 58 + 185818997 I a score=8666.000000 s hg38.chr7_KI270899v1_alt 171794 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 47082 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561561 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133129 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 192699 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039956 1 + 185818997 G i rheMac8.chr3 I 58 C 0 s macFas5.chr3 33655907 1 + 192294377 G i macFas5.chr3 I 11 C 0 s macNem1.NW_012019910v1 4423602 1 - 9440265 G i macNem1.NW_012019910v1 I 58 C 0 s manLeu1.NW_012101810v1 180368 1 - 2515279 G i manLeu1.NW_012101810v1 I 9 I 1 s colAng1.NW_012117710v1 338044 1 + 6586416 G i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chrUn_GL286444 68378 1 + 138751 G i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 383483 1 - 2409723 A i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 544827 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 129868 1 + 376347 G i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2273277 1 - 8137123 G i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61060596 123 - 77573801 I e chlSab2.chr28 145779 4 - 21531802 I e cerAty1.NW_012002954v1 17013472 59 - 21915920 I a score=1598740.000000 s hg38.chr7_KI270899v1_alt 171795 166 + 190869 AGGAGCGGAGGGAGAGACAGGGCAGGAGACAGGGAGAACACGGTCCAGAGG--CAGCGGGGAACAGTGGGAGGGAGAGCCGGGCCCTCTGCAACGCCGGCTGTGGGCTGGGACAACAGGGGAGGGTGAGGC---------AGTCCCAGCTCTCAAGGCCTCTG----GCCCAGGATGAGGT s panTro5.chr7_NW_015973580v1_random 47083 166 - 83720 AGGAGCGGAGGGAGAGACAGGGCAGGAGACAGCGAGAACACGGTCCAGAGG--CAGCGGGGAACAGTGGGAGGGAGAGCCGGGCCCTCTGCGACGCCGGCTGCGGGCTGGGACAACAGGGGAGGGTGAGGC---------AGTCCCAGCTCTCAAGGCCTCTG----GCCCAGGATGGGGt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561562 166 + 162613886 AGGAGCGGAGGGAGAGACAGGGCAGGAGACAGCGAGAACACGGTCCAGAGG--CAGCGGGGAACAGTGGGAGGGAGATCCGGGCCCTCTGCGACGCCGGCTGCGGGCTGGGACAACAGGGGAGGGTGAGGC---------AGTCCCAGCTCTCAAGGCCTCTG----GCCCAGGATGGGGt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133130 164 - 432965 GGGAGCAGAGGGAGAGACAGGGCAGGAGACATGGAGAACACGGTCCAGAGG--CAGCAGGG-ACGGTGGGAGGGAGAGCCGGGCCCTCTGCGACGCCGGCTGTGGGCTGGGACAACAGGGGAGGGTGAGGC---------AGTCCCAGCTCTCAAGG-CTCTG----GCCCAGGCTGGGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 192700 165 + 85365473 GGGAGCGGAGGGAGAGACAGGGCAGGAGACATGGAGAACACGGTCCAGAGG--CAGCGGGGAAGAGCGGGAGGGAGAGCCAGGCCCTCTGCGACG-AGGCTGTGGGCTGGGACAACAGGGGAGGGTGCGGC---------AGTCCCAGCTCTCAAGGCCTCTG----GCCCAGGATGGGGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34039957 166 + 185818997 GGGGGCAGAGGGAGAGACAGGGTCGGAGACACGGGGAACACGGTCCAGAGG--CAGCGGGGAGCAGTGGGAGGGAGAGCCAGATCCTTTGCGACACTGGCTGTGGGCTGGGACAACGGGGGAGGGTGAGGC---------AGTCCCAGCTCTCAGGGCCTCTG----GCCCAGGATGGGGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33655908 166 + 192294377 GGGGGCAGAGGGAGAGACAGGGCCGGAGACACGGGGAACACGGTCCAGAGG--CAGCGGGGAGCAGTGGGAGGGAGAGCCAGATCCTCTGCGACACTGGCTGTGGGCTGGGACAACGGGGGAGGGTGAGGC---------AGTCCCAGCTCTCAGGGCCTCTG----GCCCAGGATGGGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4423603 166 - 9440265 GGGGGCAGAGGGAGAGACAGGGCCGGAGACACGGGGAACACGGTCCAGAGG--CAGCGGGGAGCAGTGGGAGGGAGAGCCAGATCCTCTGCGACACTGGCTGTGGGCTGGGACAACGGGGGAGGGTGAGGC---------GGTCCCAGCTCTCAGGGCCTCTG----GCCCAGGATGGGGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17013531 166 - 21915920 GGGGGCAGAGGGAGAGACAGGGCCGGAGACACGGGGAACACGGTCCAGAGG--CAGCGGGGAGCAGTGGGAGGGAGAGCCAGACCCTCTGCGACACCGGCTGTGGGCTGGGACAACGGGGGAGGGTGAGGC---------AGTCCCAGCTCTCAGGGTCTCTG----GCCCAGGATGGGGT i cerAty1.NW_012002954v1 I 59 C 0 s chlSab2.chr28 145783 165 - 21531802 GGGGGCGGAGGGAGAGACAGGGCCAGAGACACGGGGAACATGGCCCAGAGG--CAGCGGGGAGCAGTGGGAGGGAGAGCCAGGCCCTCCGCGAC-CCGGCTATGGGCTGGGACAACGGGGGAGGGGGAGGC---------AGTCCCAGCTCTCAGGGCCTCTG----GCCCAGGATGGGGG i chlSab2.chr28 I 4 C 0 s manLeu1.NW_012101810v1 180370 166 - 2515279 GGGGGCAGAGGGAGAGACAGGGCCGGAGACACGGGGAACACGGTCCAGAGG--CAGCGGGGAGCAGTGGGAGGGAGAGCCAGACCCTCTGCGACACCGGCTGTGGGCTGGGACAACGGGGGAGGGTGAGGC---------AGTCCCAGCTCTCAGGGCCTCTG----GCCCAGGATGGGGT i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 338045 166 + 6586416 GGGGATGGAAGGAGAGACAGGGCAAGAGACACGGGGAACATGGTCCAGAAG--CAGCGGGGAGCAGTGGGAGGGAGAGCCAGGCCCTCTGCGATGCCAGCTGTGGGCTGGGACAACAGGGGAGGGTGAGGC---------AATCCCAGCTCTCAAGGCCTCTG----GCCCAGGATGGGGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 68379 166 + 138751 AAGTGTGGAGGGAGAGGCAGGGCAGGAGACACAGGGAATGCGGTGCAGAGG--CAGCAGGGAACAGTGGGAGGGAGAGCTGGGCCCTCTGCGATGCTGGCTGTGGGCTGGGACGACAGGGGTGGGTGAGGC---------AATCCCAGCTCTCAAGACCTCTG----GCCCAGGAGAGCAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 383484 166 - 2409723 ATGAGCGGAGGGAGAGGCAGGGCAGGAGACGTGGAGAATGTGGTGCAGAGG--CCGCGGGGAACAGTGGGAGGGAGAGCTGGGCCCTCTACAGTGCCGGCTGTGGGCTGGGACAACAGGGATGGGTGAGGC---------AGTCCCAGCTCTCAAGGCCTCTG----GCCCAGGAGGGAGT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 544828 166 - 2125214 AAGAGTGGAGAGAGGGGCAGGGCAGGAGACGGGGAGAACGTGGTGCAGAGG--CAGCAGGGAACAGTGGGAGGGAGAGCTGGGCCCTCTTCGATGCCGGCTGTGGGCTGGGATGACAGGGGTGGGTGAGGC---------AATCCCAGCTCTCAAGGCCTCTG----GCCCAGGTGGGGGt i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 129869 166 + 376347 AAGGGCGGAGGGAGAGGCAGGGCAGGAGACGCGGAGAACGCGGTGCCGAGG--CAGCGGGGAACAGTGGGAGGGAGAGCTGGGCCCTCTGCGATGCCGGCTGTGGGCTGGGACGACAGGGGTGGGTGAGAC---------GATCCCAGCTCTCAAGGCCTCTG----GCCCAGGAGGGagt i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2273278 173 - 8137123 GACAGCAGAGGGAGAGCCTGGGATGGG---AGAGTGAGCCCAGTTTAGAGGGACAGCAGGGCCCAG-GAGGGACAGAGC-AGCCACTGTGCTTTTCCTGCTGTGATGCCTCAGGAGGAGGGAGAGCCAGCCTTAAGGAGGAGTCTTAGCTC---ATCCCTCTGTGACACCCCAGGAGGAGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61060596 123 - 77573801 I a score=2074428.000000 s hg38.chr7_KI270899v1_alt 171961 219 + 190869 GTGAGATGGCCA--------------AGC---T-----GCCGTGGG-------GCCGCCCGGGAGGA-GGA---GAAGCAAACCCA-tcaaggagggctcacaggcgtggtga--tatctgacgaggctcctgaagggtgggt----aagagttttccaggaagggtggttggagggagcactaggcga-gtggccggcacgaaccaaggcctcgggTCCCCAGAGCCCTGTATGGGTCGCAGTTGGGTCTTCCCAGGTT s panTro5.chr7_NW_015973580v1_random 47249 218 - 83720 gtgagatggcca--------------agc---t-----gccgtggg-------gccacccgggagga-gga---gaagcaaaccca-tcaaggagggctcacaggcgtggtga--tatctgaagagactcctga-gggtgtgt----aagagttttccaggaagggtggttggagggagcactaggcaa-gtggccggcacgaaccaaggcctcgggTCCCCAGAGCCCTGTATGGGTCGCAGTTGGGTCTTCCCAGGTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561728 219 + 162613886 gtgagatggcca--------------ggc---t-----gccatggg-------gccacccgggagga-gga---gaagcaaaccca-tcaaggagggctcacaggcgtggtga--tatctgaagaagctcctgaagggtgtgt----aagagttttccaggaagggtggttggagggagcactaggcga-gtggccggcacgaaccaaggcctcgggTCCCCACAGCCCTGTATGGGTCAGAGTTGGGTCTTCCCAGGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133294 218 - 432965 GTGAGATGGCCA--------------AGC---T-----GCTGTGGG-------GCCACCCGGGAGGA-GGA---GAAGCAAACCCA-tcaaggagggctcacaggcgtggtga--tatctgaagaggctcctgaagggtgtgt----aagagttttccaggaagggtggttggagggagcactaggcga-gcggccggcac-aaccaaggcctcgggTCCCCAGAGCCCTGTATGGGTCGGAGTTGGGTCTTCCCAGGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 192865 222 + 85365473 GTGAGATGGCCA--------------AGC---T-----GCCATGGG-------GCCACCCGGGAGGA-GGAGGGGAAGCAAAggca-tcaaggagggcacacaggcgcggtga--tatctgaagaggctcctgaagggtgtgt----aagagttttccaggaagggtggttggagggagcactaggcaa-gtggctggcacgaaccaaggcctcgggTCCCCAGAGCCCTGTGTGGGTTGAAGCTGGGTCTTCCCAGGTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34040123 218 + 185818997 GTGAGATGGCCA--------------AGC---T-----GCCGTGGG-------GCCGCCCAGGAGGA-GGA---GAAGCAAACCCA-TCGGGGAGGGCTCACGGGCCTGGTGG--TATCTGCAGAGGCTCCTGAAGGGTGTGT----GAGAG-TGTCCAGGAAGGGTGCTTGGAGGGAGCCCTGGGCGA-GTGGCCGGCACGAACAAAGGCCTAGGGTGCCCAGAGCCCTGTGTGGGTCGGAGCTGGGTCTTTCCAGGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33656074 218 + 192294377 GTGAGATGGCCA--------------AGC---T-----GCCGTGGG-------GCCGCCCAGGAGGA-GGA---GAAGCAAACCCA-TCGGGGAGGGCTCACGGGCCTGGTGG--TATCTGCAGAGGCTCCTGAAGGGTGTGT----GAGAG-TGTCCAGGAAGGGTGCTTGGAGGGAGCCCTGGGCGA-GTGGCCGGCACAAACAAAGGCCTAGGGTGCCCAGAGCCCTGTGTGGGTCGGAGCTGGGTCTTTCCAGGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4423769 218 - 9440265 GTGAGATGGCCA--------------AGC---T-----GCCGTGGG-------GCCGCCCAGGAGGA-GGA---GAAGCAAACCCA-TCGGGGAGGGCTCACGGGCCTGGTGG--TATCTGCAGAGGCTCCTGAAGGGTGTGT----GAGAG-TGTCCAGGAAGGGTGCTTGGAGGGAGCCCTGGGCGA-GTGGCCGGCACGAACAAAGGCCTAGGGTGCCCAGAGCCCTGTGTGGGTCGGAGCTGGGTCTTTCCAGGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17013697 218 - 21915920 GTGAGATGGCCA--------------AGC---T-----GCCGTGGG-------GCCGCCCAGGAGGA-GGA---GAAGCAAACCCA-TCGGGGAGGGCTCACAGGCCTGGTGG--TATCTGCAGAGGCTCCTGAAGGGTGTGT----GAGAG-TGTCCAGGAAGGGTACTTGGAGGGAGCCCTGGGCGA-GTGGCCGGCACGAACAAAGGCCTAGGGTGCCCAGAGCCCTGTGTGGGTCGGAGCTGGGTCTTTCCAGGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 145948 212 - 21531802 GTGATCTGGCCA--------------AGC---T-----GCCGTGGG-------GCTGCCCAGGAGGA-GGA---GAAG--CACCCA-TCGGGGAGGGCTCACGGGCCTGGTGG--TATCTGCAGAGACTCCTGAAGGCTGTGG----GA-----GTCCAGGAAGGGTGCTTGGAGGGAGCCCTGGGCGA-GTGGCCGGCACGAACAAAGTCCTCGGGTCCCCAGAGCCCTGTGTGGGTCGGAGCTGGGTCTTCCCAGGTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 180536 218 - 2515279 GTGAGATGGCCA--------------AGC---T-----GCCGTGGG-------GCCGCCCAGGAGGA-GGA---GAAGAAAACCCA-TCGGGGAGGGCTCACGGGCCTGGTGG--TATCTGCAGAGGCTCCTGAAGGGTGTGT----GAGAG-TGTCCAGGAAGGGTGCTTGGAGGGAGCCCTGGGCGA-GTGGCCGGCACGAACAAAGGCCTAGGGTGCCCAGAGCCCTGTGTGGGTCGGAGCTGGGTCTTTCCAGGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 338211 219 + 6586416 GTGAGATGGCCA--------------AGC---T-----GCCGTGGG-------GCCGCCCAGGAGGA-GGA---GAAGCAAGCCCA-tcggggagggctcatgggcgtggcgg--tatctgaagaggctcctgaagggtgtgt----gagagttttccaggaagggtgcttggagggagtgctgggtga-gtggccggcaccaacaaaggcctcgTGTCCCCAGAGCCCTGCGTGGGTCGGAGCTGGGTCTTCCCAGGTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 68545 212 + 138751 GTGAGATGGCCA--------------CGC---T-----GCCATGGG-------GCCATCTGGGAAGA-------GACACAAACCCA-TCAAGGAGGGCTCACAGGCACGGTGA--TCTCTGAAGAGGTTCCTGACGGGTGTGT-------AGTTTTCCAGGAAGGGTGGTTGGAGGGAGCGATAGA-GA-GTGGCTGGCTCGGACAAAGGCCTCGGGTCCCGAGAGACCTGTGTGGATCAGAGCTGGGTCTTCCTGGGCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 383650 217 - 2409723 GTGAGATGACCA--------------CGC---T-----ACCATGGG-------GCCACCCAAGAGGA-------GAAGCAAACCCA-TCAAGGAGGGTTCATAGGCACGGTGATCTCTCTGAAGAGGCTCCTGAAGGGTGTGT----AGGAGTTTTCCGGGAAGGATGGTTGGAGGGAGCGATAGA-GA-GTGGCTGGCTCGGACAAAGGCCTCGGGTCCCCAGAGCCCTGTGTGGATCAGAGCTGGGTCTTCCCAGGCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 544994 202 - 2125214 gtgagatggcca--------------cgc---t-----gccatggg-------gccacccaggagga-------gaagcaaaccca-tcaaggagggctcacaggcacagtga--tctctgaagaggctcctgaagggtgtgt----aggagttttccaggaaggatggttggagggagcGATAGA-GA-GTGGCTGG-------------CTCGGGTCCCCAGAGCCCTGTGTGGATCAGAGCTGGGTTTTCCCACGCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 130035 215 + 376347 gtgagatggcca--------------cgc---t-----gccatggg-------gccacccagtagga-------gaagcaaacgca-tcaaggagggctcacaggcacggtga--tctctgaagaggctcctgaaggatgtgt----aggagttttccaggaaggatggttggagggagccataga-ga-gtggctggctcggacaaaggcctcgggTCCCCAGAGCCCTGTGTGGATCAGAGCTGGGTCTTCCCGGGCT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2273451 228 - 8137123 GGGAGCTAGCCCTAGGGAGGAGTCTTAGCTCAT-----CCCACTGT-------GACATCCAGGGGGAGGGA---GAGACAGTCTCA-CAGAGGA-GGCTCATAGGCATGGCAG--TCTCTGAAGAGGCTCCGGGGGGGTGGGGTATGAGGAGTTTTCCTGAAAGGGCAAGTGGAGGGGATACTAGGGCC-GTGCCC-------ATAAAGGCCTTGGGTCTTCATGGCCCCAAGTGGGGCAGAGCCAGGTCTTTCC----- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61060719 220 - 77573801 GTGACATGCTCA--------------GGG---TCAGGCCCCATGGGGGGAGGAGGGAACAAGGAGGAGGGA---CAAGCCAGCCCAGTCACAGAGGGCTCATAGGTGCCACAA--TACCTGAAGAGGCTCTTGAGGTGTGTGT----AGGAGTCTCCCAGGAAAGCAA--TGGAGGGCCCGCCAGGCCATGGGGTGAGTGTGAACAAAGGGCTTGCATCCCCAGAGCCCTGGA------------GGGTCTTCTCAGGTA i canFam3.chr6 I 123 I 22 a score=426376.000000 s hg38.chr7_KI270899v1_alt 172180 48 + 190869 AGGGTTGAGGTTCGGGTTATGTCTC--TTCCACAGCCCTTGAGAGCAATA s panTro5.chr7_NW_015973580v1_random 47467 48 - 83720 AGGGTTAAGGTTCGGGTTATGTCTC--TTCCACAGCCCTTGAGAGCAGTA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561947 50 + 162613886 AGGGTTAAGGTTCGGGTTATGTCTCTTTTCCATAGCCCTTGAGAGCAATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133512 50 - 432965 CGGGTTAAGGTTCGGGTTATGTCTCTTTTCCACAGCCGTTGAGAGCAATA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 193087 50 + 85365473 AGGGTTAAGGTTCGGATTATGTCTCTTTTCCACAGCCCTTGAGAGCAATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34040341 49 + 185818997 AGGGTTAAGGTTCGGGCTGTGTCTCTTTTCCACAGCCCTTGAGAGC-GTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33656292 50 + 192294377 AGGGTTAAGGTTCGGGCTGTGTCTCTTTTCCACAGCCCTTGAGAGCAGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4423987 50 - 9440265 AGGGTTAAGGTTCGGGCTGTGTCTCTTTTCCACAGCCCTTGAGAGCAGTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17013915 50 - 21915920 AGGGTTAAGGTTCGGGCTGTGTCTCTTTTCCACAGCCCTTGAGAGCAGTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 146160 50 - 21531802 AGGGTTAAGGTTCGGGCTGTGTCTCTCTTTCACAGCCCTTGAGATCGGTA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 180754 50 - 2515279 AGGGTTAAGGTTCGGGCTATGTCTCTTTTCCACAGCCCTTGAGAGCAGTA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 338430 50 + 6586416 AGGGTTAAGGTTCAGGTTGTGTCTCTTTTCCACAGCCCTTGAGAGCAGTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 68757 46 + 138751 AGGGTTAGGGTTCAGATTATGTCTCTTTTCCACAGCCCTTGAGAGT---- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 383867 46 - 2409723 AGGGTTAGGTTTCAGGTTATGTCTCTTTTCCATAGCCCTTGAGAGC---- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 545196 46 - 2125214 AGGGTTAGGGTTCAGGTTATGTCTCTTTTCCATAGCCCTTGAGAGC---- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 130250 46 + 376347 AGGGTTAGGGTTCGGGTTATGTCTCTTTTCCACAGCCCTTGAGAGC---- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2273679 12 - 8137123 --------------------------------------CTAGGACCAATA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61060939 22 - 77573801 I a score=226661.000000 s hg38.chr7_KI270899v1_alt 172228 24 + 190869 GGATTTCAGCAAATGTAGCTTGTG s panTro5.chr7_NW_015973580v1_random 47515 24 - 83720 GGATTTCAGCAAATGTAGCTTGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 561997 24 + 162613886 GGATTTCAGCAAATGTAGCTTGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133562 23 - 432965 TGATTTCAGC-AATGTAGCTTGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 193137 24 + 85365473 AGATTTCAGCAAATGTAGCTTGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34040390 24 + 185818997 AGATTTCCGCAAATGTAGCTTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33656342 24 + 192294377 AGATTTCCGCAAATGTAGCTTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4424037 24 - 9440265 AGATTTCCGCAAATGTAGCTTGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17013965 24 - 21915920 AGATTTCCGAAAATGTAGCTTGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 146210 24 - 21531802 AGATTTCCACAAATGTAGCTTGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 180804 24 - 2515279 AGATTTCCGAAAATGTAGCTTGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 338480 24 + 6586416 AGATTTCAGCAAATGTAGCTTGTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 68803 23 + 138751 -GATTTCAGCAAACGTAGCTTGTA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 383913 23 - 2409723 -GATTTCAGCAAACGTAGCTTGTA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 545242 23 - 2125214 -AATTTCAGCAAACGTAGCTTGTA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 130296 23 + 376347 -AGTTTCAGCAAACGTAGCTTGTA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2273691 24 - 8137123 TGATTTTAGCAAATACAGCTTTCA i otoGar3.GL873611 C 0 I 8 s canFam3.chr6 61060961 13 - 77573801 GGGTTTCAGCAAA----------- i canFam3.chr6 I 22 C 0 a score=29548.000000 s hg38.chr7_KI270899v1_alt 172252 3 + 190869 TGG s panTro5.chr7_NW_015973580v1_random 47539 3 - 83720 TGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 562021 3 + 162613886 TGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133585 3 - 432965 TGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 193161 3 + 85365473 TGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34040414 3 + 185818997 TGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33656366 3 + 192294377 TGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4424061 3 - 9440265 TGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17013989 3 - 21915920 TGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 146234 3 - 21531802 CGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 180828 3 - 2515279 TGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 338504 3 + 6586416 CGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 68826 3 + 138751 TGG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 545265 3 - 2125214 TGG i cebCap1.NW_016107703v1 C 0 I 161 s aotNan1.NW_018514293v1 130319 3 + 376347 TGG i aotNan1.NW_018514293v1 C 0 I 337 s otoGar3.GL873611 2273723 3 - 8137123 TAG i otoGar3.GL873611 I 8 C 0 e canFam3.chr6 61060974 0 - 77573801 C e saiBol1.JH378296 383936 0 - 2409723 C a score=2267706.000000 s hg38.chr7_KI270899v1_alt 172255 390 + 190869 TTTCTGATGGTCAGAAATAATCCACATT---TTAGGATTTCTGTAATCCTGTACTTTAAAACTGGCATCACAGACCATTGCCCCTGCAGACAGCAGCCTGGGCC--TCCAAATGGAGGGGCCT---GCGGGGGGATGAGCTGTCCGGAGGGTCCACACTGGAGGAGGGGGC---AGGCCACGG----CC--CGGCTGGAGAGCC-T--CTGTGCCTAGT-GGGCCCCGGAGCCCC-AGGTCCCTGGTGCAGGGGGTGGAGGTCAGGCAGGCCCTGGGCAGCT----GATTGCTGCCTGAAGCCCACCCTGAggagggagggaggcagggg--aggagACAGAACAGATCC---CTTGGGG--GAAGCAAACCCACATTCCCAGA----CCCAGGAG-------CGCCCACGTCAGGGGGACCC-----------CAGGGAGGGCC s panTro5.chr7_NW_015973580v1_random 47542 390 - 83720 TTTCTGATGGTCAGAAATAATCCACATT---TTAGGATTTCTGTAATCCTGTACTTTAAAACTGGCATCACAGACCAGTGCCCCTGCAGAGAGCAGCCTGGGCC--TCCAAATGGAGGGGCCT---GCAGGGGGATGAGCTGTCCGGAGGGTCCACACTGGAGGAGGGGGC---GGGCCACGG----CC--AGGCTGGAGAACC-T--CTGTGCCTAGT-GGGACCCGGACCTCC-AGGTCCCTGGTGCAGGGGGTGGAGGTCAAGCAGGCCCTGGGCAGCC----AATTGCTGCCTGAAGCCCACCCTGAggagggagggaggcagggg--aggaggcagAACAGATCC---CTTGGGG--GAAGCAAACCCACATTCCCAGA----CCCAGGAG-------TGCCCACATCAGGGGGACCC-----------CAGGGAGGGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 562024 390 + 162613886 TTTCTGATGGTCAGAAATAATCCACATT---TTAGGATTTCTGTAATCCTGTACTTTAAAACTGGCATCACAGACCGGTGCCCCTGCAGAGAGCAGCCTGGGCC--TCCAAATGGAGGGGCCT---GCAGGGGGATGAGCTGTCCGGAGGGTCCACACTGGAGGAGGGGGC---AGGCCACGG----CC--AGGCTGGAGAACC-T--CTGTGCCTAGT-GGGCCCCGGACCCCC-AGGTCCCTGGTGCAGGGGGTGGAGGTCAGGCAGGCCCTGGGCAGCC----GATTGCTGCCTGAAGCCCACCCTGAggagggagggaggcagggg--aggaggcagAACAGATCC---CTTGGGG--GAAGCAAACCCACATTCCCAGA----CCCAGGAG-------TGCCCACATCAGGGGGACCC-----------CAGGGAGGGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133588 388 - 432965 TTTCTGATGGTCAGAAATAATCCACATT---TTAGGATTTCTGTAATCCTGTGCCTTAAAACTGGCATCACAGACCATTGCCCCTGCAGAGAGCAGCCTGGGCC--TCCAAATGGAGGGGCCT---GC-TGGGGATGAGCTGTCCGGAGGGTCCACACTGGAGGAGGGGGC---AGGCCACGG----CC--AGGCTGGAGAGCC-T--CTGTGCCTAGT-GGGCCCCAGAGCCCC-AGGTCCCTGGTGCAGGGGGTGGAGGTCAGGCAGGCCCTGGGCAGCC----GATTGCTGCCTGAAGCCCACCCTGAggagggagggaggcagggg--aggaggcagAAC-GACCC---CTTGGGG--GAAGCAAACCCACATTCCCAGA----CCCAGGAG-------TGCCCACATCAGGGGGACCC-----------CAGGGAGGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 193164 291 + 85365473 TTTCTGACGGTCAGAAATAATCCACATT---TTAGGCTTTCTATAATCCTGTACTTTAAAACTGGCGTCACAGACCAGTGCCCCTGCAGAGAGCAGCCTGGGCC--TCTAAAT--------------------------------GGAGGGTCCACACTGGAGGAGGGGGC--GGGGCCACGC----CC--AGGCTGGAGAGCC-T--CTGTGCCTAGT-GGGCCCCGGAGTCCC-AGGTCCCTGGTGCAG---------------------------------------------------------------------------GGGG--AGGAGGCAGAACAGATCC---CTTGGGG--GAAGCAAACCCACTTCCCCAGA----CCCAGGAG-------TGCCCACATCAGGGGGACCC-----------CAGGGAGGGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34040417 382 + 185818997 TTTCTGACAGTCAGAAATAATCCACATG---GTAGGCTTTCTGTAATCCTGTACTTTAAAATTGGCATCACAGACCAGTGCCCCTGCAGAGAGCAGCCTGGGCC--TCCAAATGGAGGAGCCT---GCTGGGGAATGAGCTGTCTCGGGGGTCCACACTGGA-----------GGAGCCACGC----CC--AGGCTGGAAAGCC-T--CTATGCATAGC-GGGCCCCGGAGCCGC-AGGTCCCTGGTGCAGGGGGTGGAGGTCAGGCAGGCCCTGGGCAGCC----AACTGCTGCCCGAAGCCCACCCTGAGGAGGGAGGGAGGCAGAAG--AGGAGGCAGGACAGATCC---CTTGGGG--GAGGCAAAGCCACTTCCCCAGA----CCCAGCAG-------TGCCCATATCTGGGGGACCC-----------CAGGAAGGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33656369 382 + 192294377 TTTCTGACAGTCAGAAATAATCCACATG---GTAGGCTTTCTGTAATCCTGTACTTTAAAATTGGCATCACAGACCAGTGCCCCTGCAGAGAGCAGCCTGGGCC--TCCAAATGGAGGAGCCT---GCTGGGGAATGAGCTGTCTCGGGGGTCCACACTGGA-----------GGAGCCACGC----CC--AGGCTGGAAAGCC-T--CTATGCATAGC-GGGCCCCGGAGCCGC-AGGTCCCTGGTGCAGGGGGTGGAGGTCAGGCAGGCCCTGGGCAGCC----AACTGCTGCCCGAAGCCCACCCTGAGGAGGGAGGGAGGCAGAAG--AGGAGGCAGGACAGATCC---CTTGGGG--GAGGCAAAGCCACTTCCCCAGA----CCCAGCAG-------TGCCCATATCTGGGGGACCC-----------CAGGAAGGGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4424064 382 - 9440265 TTTCTGACAGTCAGAAATAATCCACATG---GTAGGCTTTCTGTAATCCTGTACTTTAAAATTGGCATCACAGACCAGTGCCCCTGCAGAGAGCAGCCTGGGCC--TCCAAATGGAGGAGCCT---GCTGGGGAATGAGCTGTCTCGGGGGTCCACACTGGA-----------GGAGCCACGC----CC--AGGCTGGAAAGCC-T--CTATGCATAGC-GGGCCCCGGAGCCGC-AGGTCCCTGGTGCAGGGGGTGGAGGTCAGGCAGGCCCTGGGCAGCC----AACTGCTGCCCGAAGCCCACCCTGAGGAGGGAGGGAGGCAGAAG--AGGAGGCAGGACAGATCC---CTTGGGG--GAGGCAAAGCCACTTCCCCAGA----CCCAGCAG-------TGCCCATATCTGGGGGACCC-----------CAGGAAGGGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17013992 391 - 21915920 TTTCTGACAGTCAGAAATAATCCACATG---GTAGGCTTTCTGTAATCCTGTACTTTAAAATTGGCATCACAGACCAGTGCCCCTGCAGAGAGCAGCCTGGGCC--TCCAAATGGAGGGGCCT---GCTGGGGAATGAGCTGTCTCAGGGGTCCACACTGGAGGAGGCGGT--GGAGCCACGC----CC--AGGCTGGAAAGCC-T--CTATGCATAGC-GGGCCCCGGAGCCGC-AGGTCCCTGGTGCAGGGGGTGGAGGTCAGGCAGGCCCTGGGCAGCC----AACTGCTGCCCGAAGCCCACCCTGAGGAGGGAGGGAGGCAGAAG--AGGAGGCAGGACAGATCC---CTTGGGG--GAGGCAAAGCCACTTCCCCAGA----CCCAGCAG-------TGCCCATATCTGGGGGACCC-----------CAGGAAGGGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 146237 388 - 21531802 TTTCTGACGGTCGGAAATAATCCACGT-----TAGGCTTTCTGTAATCCTGTACTTTAAAATTGGCATCACAGACCAGTGCCCTTGCAGACAGCAGCCTGGGCC--TCCAAATGGAGGGGCCT---GCTGGGGAATGAGCTGTCTCGGGGGTCCACACTGGAGGAGG-GGC--GGAGCCGCGG----CC--AGGCTGGAGAGCC-T--CTATGCAGAGC-GGGCCCCGGAATCCC-AGGTCCCTGGTGCAGAGGGTGGAGGTCAGGCAGGCCCTGGGCAGCC----AACTGCTGCCCGAAGCCCACCCTGAggagggagggaggcagagg--gggaggcaggACAGATCC---CTTCGGG--GAAGCAAAGCCACTTCCCCAGA----CCCAGCAG-------TGCCCATATCTGGGGGACCC-----------CAGGAAGGGCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 180831 391 - 2515279 TTTCTGACAGTCAGAAATAATCCACATG---GTAGGCTTTCTGTAATCCTGTACTTTAAAATTGGCATCGCAGACCAATGCCCCTGCAGACAGCAGCCTGGGCC--TCCAAATGGAGGGGCCT---GCTGGGGAATGAGCTGTCTCGGGGGTCCACACTGGAGGAGGCGGT--GGAGCCACGC----CC--AGGCTGGAAAGCC-T--CTATGCATAGC-GGGCCCCGGAGCCGC-AGGTCCCTGGTGCAGGGGGTGGAGGTCAGGCAGGCCCTGGGCAGCC----AACTGCTGCCCGAAGCCCACCCTGAGGAGGGAGGGAGGCAGAAG--AGGAGGCAGGACAGATCC---CTTGGGG--GAGGCAAAGCCACTTCCCCAGA----CCCAGCAG-------TGCCCATATCTGGGGGACCC-----------CAGGAAGGGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 338507 359 + 6586416 TTTCTGATGGTCAGAAATAACCCACGTG---TTAGGCTTTCTGTAATCCTGTACTTCAAAATTGGCATCACAGACCAGTGCCCCTGCAGAGAGCAGCCTGGGCC--CCTAAATGGAGGGGCCT---GCTGGGGAATGAGCTGTCCGGAGGGTCCACACTGGAGGAGGGGGA--AGAGCCACGC----CC--GGGCTGGAGAGCC-T--CTCTGCAGAGT-GGGCCCCGGAATCCC-AGGTCCCTGGTGCAGGGAGTGGAGGTCAGGCAGGCCCTGGGTAGCC----AATTGCTGCCCGAAGCCCACTCTGAGGAGGGAGGGAG----------GGAGGT-----------------------------AACCCACTTCCCCAGA----CCCAGCAG-------TGCCCATATCTCGGGGACCC-----------CAGGAAGGGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 68829 391 + 138751 TTTCTGATGGTCAGAAATAATCCATGTT---TTAAGCTTTCTGTAATCCTGTACTTTAAAATTCGCATCACAAACCAGTGCCCCTGCAGAGAGCAGCCTGGTCC--TCTAAATGTATGGGCCT---GCTGGGGGAAGAGCTGTCCCCAGGATCCACACTGGAGGAGG------AGGGCCATGCCCAGCC--AGGCTGGAAAGCC-T--CTGCACTGAGT-GGGCCCCAGAGCCTC-AGGTCCCTGGTGCAGGGGGAGGAAGTCAGGCAGGCCCTGGGCAGCC----AATTGCTGCCCAAAGCCCACCCTGAGGAGGGAAGGGGGCGGGAG--AGGAGGCAGAACACATCC---CTTGAGG-TGAAGCAAACACAATTCCCCAGC----CTCAGCAG-------TGCCCACATCAGGGGGACCA-----------T-GGAAAGGTC i calJac3.chrUn_GL286444 C 0 C 0 s otoGar3.GL873611 2273726 317 - 8137123 TTTCTAATGGTCAGAAACAAATGGCATGTTTTTAGGATTCATGTTATCTAGTCCTTTAAAATCTACATCCCAGACCAGTGCCCCTGCAGAGAGCAGCCTGGTCC--------TGGGGAGGCCT---------------------CAGAAGATCCACCCTGGAGAGTCAAACATGGGGCCATAC----TA--AGGCTGGGGGGCTGG--CTGAGCTGAATGGGGCCCCGGAGCCCCAAAATCCATGGTGCAGGGG--TATTGTCAGGCAGGACCTG---------------------------------------AGGAGGGGAAAGGTGG--GGGGGGGAGAATAACCCC---CTGGGGG--------AATAAACTGGCCCTGA--------------------------GTAGGGAAGACCC-----------CAGGGAGGACC i otoGar3.GL873611 C 0 I 633 s canFam3.chr6 61060974 366 - 77573801 ------------------------------------------------CTGT-CTTTAAGATTTGCACCCTAGCCTGGCATGCTCACCGGAGAGAGCCTGGACCTGTCTGCAGGGATCGGCCTCATGCTAAGGGGAGGGCAGACT-----GTCCA----AGGTCAGAGGTC--CTAACCCTGC----CCGGAGGAGGTAGGGGC-TGGCTGTCCTGAGG-GAGGCCCTGGACCCC-AATATTTCTGTGCAGAACCTGAGG-------AGGGGCTGGGGGGATGAGGGAATGTCACCTGCAGCCCACCCCAGGGCAGGAAGAGACAGGGAGAAAAGAGGAAGGACAGATCTGGGATGGGGGGTGGAGTCAAGGGACAAACTCAGAGCGCCCCGAGAGGCTTCCCTGCCCACACT-----GACCCTTCCCTACTCTCTCTGAGGCCC i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 130322 337 + 376347 I e saiBol1.JH378296 383936 0 - 2409723 C e cebCap1.NW_016107703v1 545268 161 - 2125214 I a score=2170458.000000 s hg38.chr7_KI270899v1_alt 172645 370 + 190869 AGCCCTGCGTGTAC---ACCCCTCCTGCCAGGACCCTGCTTCGGAGGT-CACACCAGCTCCTTGTGGAATGGTCTGTTGGAGCGGA-----CCTGACCTGGAGAATCCACGCCTCTCACACA----TGGAGCTG-----GGCAACAGCTGGCACCCGCC-CC-CTCGGCCTC-----AGCCTCCCTGGGGG-CTC-------------CCCCGCCACAAGAGGGGCCGTCCC------------GGGTGCTTTGAGTGGAGTGAGCTAGA--GAGT--CGGATATTAGGG------------CCACCTAGGAGAGCCGGCCTT---GTCCATCGCCTGGCCGGGGCT----GGACTGAC-------GTGAGCT----GTCTCC-AAGTCCAGGAGGAAACTCACAAACTCTGAGCTACACAGCAGGTATGAGTCCTGCTGCAACACAGTGCGCTTT- s panTro5.chr7_NW_015973580v1_random 47932 370 - 83720 AGCCCTGCGTGTAC---ACCGCTCCTGCCAGGACCCTGCTTCCGAGGT-CACACCAGCTCCTTGTGGAATGGTCTGTTGGAGTGGA-----CCTGACCTGGAGAATCCACGCCTCTCACACA----TGGAGCTG-----GGCAACAGCTGGCACCTGCC-CC-CTCGGCCTC-----AGCCTCCCTGGGGG-CTC-------------CCCCACCACAAGAGGGGCCATCCT------------GGGTGCTTTGAGTGGAGTGAGCTAGA--GAGT--CGGATATTCGGG------------CCGCCTAGGAGAGCCGGCCTT---TTCCATCGCCTGGCCGGAGCT----GGACTGAC-------GTGGGCT----GTCTCC-AAGTCCAGGAGGAAACTCACAAACTCTGAGCTACACAGCAGGTATGAGTCCTGCTGCAACACAGTGGGCTTT- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 562414 370 + 162613886 AGCCCTGCGTGTAC---ACCCCTCTTGCCAGGACCCTGCTTCCGAGGT-CACACCAGCTCCTTGTGGAATGGTCTGATGGAGTGGA-----CCTGACCTGGAGAATCCACACCTCTCACACA----TGGAGCTG-----GGCAACAGCTGGCACCCGCC-CC-CTCGGCCTC-----AGCCTCCCTGGGGG-CTC-------------CCCTGCCACAAGAGGGGCCATCCT------------GGGTGCTTTGAGTGGAGTGAGCTAGA--GAGT--CGGATATTAGGG------------CCGCCTAGGAGAGCCGGCCTT---TTCCATCGCCTGGCCGGGGCT----GGACTGAC-------GTGGGCT----GTCTCC-AAGTCCAGGAGGAAACTCACAAACTCTGAGCTACACAGCAGGTATGAGTCCTGCTGCAACACAGTGGGCTTT- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 133976 366 - 432965 AG-CCTGCGTGTAC---ACC-CTCCTACCAGGACCCTGCTTCCGAGGT-CACACCAGCTCCTTGTGGAATGGTCTGATGGAGTGGA-----CCTGACCTGGAGAATCCACGCCCCTCACACA----TGGAGCTG-----GGCAACAGCTGGCACCCG-C-CC-CTCGGCCTC-----AGCCTCCCTGGGGG-CTC-------------CCCTGCCACAAGAGGGGCCGTCCC------------GGGTGCTTTGAGTGGAGTGAGCTAGA--GAGT--CGGATATTAGGG------------CCGCCTAGGAGAgccggcctt---g-ccatcgcctggccggggct----ggactgac-------gtggGTC----GGCTCC-AAGTCCAGGGGGAAACCTGCAAACTCTGAGCTGCACAGCAGGTATGAGTGCTGCTGCGACACAGTGGGCTTT- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 193455 371 + 85365473 GGCCCTGCGTGTAC---ACCCTTCCTGCCAGGACCCTGCTCCCGAGGT-CACACCAGCTCCTTGTGGAATGGTCTGATGGGGTGGA-----CCTGACCTGGAGAATCCATGCCTCTCACACA----CGGAGCTG-----GGCGACAGCTGGCACCCACCGCC-CTTGGCCTC-----AGCCTCCCTGGGGG-CTC-------------CGCCGCCACAAGAGGGGCTGTCCT------------GGGTGCTTTGAGTGGAGTGAGCTAGA--GAGT--CGGATATTAGGG------------CCACCTAGGAGAGCCGGCGTT---GCCCATCTCCTGGCCGCGGCT----GGACTGAC-------GTGGGCT----GGCTCC-AAGTCCAGGAGGAAACTCACAAACTCTGAGCTACACAGCGGGTATGAGTCCTGCTGCAACATGGTGGTCTTT- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34040799 374 + 185818997 GGCACTTCGTGGAC---ACCCCTCCGGCCAGGCCCTTGGTTCCAAGTT-CACACCGGCTCCCTGTGGAATGGTCTGACGGACAGGA----GTCTGACCTGGAGAATCCATGCCTCTCACACA----TGGAGCTG-----GGCAACAGCTGGGACCTGCC-CCGCTCAGCCTC-----AGGCTCCCCGGAGG-CTC-------------CCCTGCCACAAGAGGGGCTGTCCC------------GGGTGCTTCGAGTGGAGTGAGCTAGAGGGAGT--GGGACAGTAGGG------------CCGCCTGGGAGAGCCGGCCTT---GCCCACCACCTGGCCGGAGCT----GGACTGAC-------GTCGGCT----GGCTCC-AAGTCCAGGAGGACACTCATGAACTCTGAGCTACTCAGAGGGTACGAGTCCTGCTGCAACACAGTGGTCTTT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33656751 374 + 192294377 GGCACTTCGTGGAC---ACCCCTCCGGCCAGGCCCTTGGTTCCAAGTT-CACACCGGCTCCCTGTGGAATGGTCTGACGGACAGGA----GTCTGACCTGGAGAATCCATGCCTCTCACACA----TGGAGCTG-----GGCAACAGCTGGGACCTGCC-CCGCTCAGCCTC-----AGGCTCCCCGGAGG-CTC-------------CCCTGCCACAAGAGGGGCTGTCCC------------GGGTGCTTCGAGTGGAGTGAGCTAGAGGGAGT--GGGACAGTAGGG------------CCGCCTGGGAGAGCCGGCCTT---GCCCACCACCTGGCCGGAGCT----GGACTGAC-------GTCGGCT----GGCTCC-AAGTCCAGGAGGACACTCATGAACTCTGAGCTACTCAGAGGGTACGAGTCCTGCTGCAACACAGTGGTCTTT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4424446 374 - 9440265 GGCACTTCGTGGAC---ACCCCTCCGGCCAGGCCCTTGGTTCCAAGTT-CACACTGGCTCCCTGTGGAATGGTCTGACGGACAGGA----GTCTGACCTGGAGAATCCATGCCTCTCACACA----TGGAGCTG-----GGCAACAGCTGGGACCTGCC-CCGCTCAGCCTC-----AGGCTCCCCGGAGG-CTC-------------CCCTGCCACAAGAGGGGCTGTCCC------------GGGTGCTTCGAGTGGAGTGAGCTAGAGGGAGT--GGGACAGTAGGG------------CCGCCTGGGAGAGCCGGCCTT---GCCCACCACCTGGCCGGAGCT----GGACTGAC-------GTCGGCT----GGCTCC-AAGTCCAGGAGGACACTCATGAACTCTGAGCTACTCAGAGGGTACGAGTCCTGCTGCAACACAGTGGTCTTT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17014383 374 - 21915920 GGCACTGCGTGGAC---ACCCCTCCGGCCAGGCCCTTGGTTCCAAGTT-CACACCGGCTCCCTGTGGAATGGTCTGATGGACAGGA----GTCTGACCTGGAGAATCCATGCCTCTCACACA----TGGAGCTG-----GGCAACAGCTGGGACCTGCC-CCGCTCAGCCTC-----AGGCTCCCCGGAGG-CTC-------------CCCTGCCACAAGAGGGGCTGTCCC------------GGGTGCTTCGAGTGGAGTGAGCTAGAGGGAGT--GGGACAGTAGGG------------CCGCCTGGGAGAGCCGGCCTT---GCCCACCACCTGGCCGGAGCT----GGACTGAC-------GTCGGCT----GGCTCC-AAGTCCAGGAGGACACTCATGAACTCTGAGCTACTCAGAGGGTACGAGTCCTGCTGCAACACAGTGGTCTTT- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 146625 374 - 21531802 GGCAGTGCGTAGAC---ACCCCTTCGGCCAGGCCCTTGGTTCCAAGTT-CACACCGGCTCCCTGTGGAATGGTCTGATGGACAGGA----GTCTGACCTGGAGAATCCATGCCTCTCACACA----TGGAGCTG-----GGCGACAGCTGGGACCTGCC-CCCCTCAGCCTC-----AGGCTCCCCGGAGG-CTC-------------CCCTGCCACAAGAGGGGCTGTCCC------------GGGTGCTTCGAGTGGAGCGAGCTAGAGGGAGT--GGGACAGTGGGG------------CCGCCTGGGAGAGCCGGCCTT---GCCCACCACGTGGCCGGAGCT----GGACTGAC-------GTGGGCT----GGTTCC-AAGTCCAGGAGGACACTCATGAACTCTGAGCTACTCAGAGGGTACAAGTCCTGCTGCCACACGGTGGTCTTT- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 181222 374 - 2515279 GGCACTGCGTGGAC---ACCCCTCCGGCCAGGCCCTTGGTTCCAAGTT-CACACTGGCTCCCTGTGGAATGGTCTGATGGACAGGA----GTCTGACCTGGAGAATCCATGCCTCTCACACA----TGGAGCTG-----GGCAACAGCTGGGACCTGCC-CTGCTCAGCCTC-----AGGCTCCCCGGAGG-CTC-------------CCCTGCCACAAGAGGGGCTGTCCC------------GGGTGCTTCGAGTGGAGTGAGCTAGAGGGAGT--GGGACAGTAGGG------------CCGCCTGGGAGAGCCGGTCTT---GCCCACCACCTGGCCGGAGCT----GGACTGAC-------GTCGGCT----GGCTCC-AAGTCCAGGAGGACACTCATGAACTCTGAGCTACTCAGAGGGTACGAGTCCTGCTGCAACACAGTGGTCTTT- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 338866 337 + 6586416 GGCACTGCGTGGAC---ACCCCTCCGGCCAGGCCCTTGGTTCCAAGTT-CACACCAGCTCCCTGTGGAACGGTCTGATGGAGAGGA----GTCTGACCTGGAGAATCCATGCCTCTCACACA----TGGAGCTG-----GGCAACAGCTGGTACCTGTC-CTGCTCAGCCTC-----AGGCTCCCCGGAGG-CTC-------------CCCTGCCACAAGAGGGGCTGTCCC------------GGGTGCTTCGAGTGGAGTGAGCTAGAGAGAGT--GGGATAGTAGGG------------CCGCCTGGGAGAGCCGGCCTT---GCCCACCACCCAGCCGGAGCT----GGACTGAC-------GTGGGCT----GGCTCC-AAGTCCAAG-------------------------------------AGTCCTGCTGCAACACAGTGGTCTTT- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 69220 379 + 138751 GGCAGTGTGGGCGC---ACACCTCTGGCCGGGACCCTGAATCTGAGGT-CACACAAGTTCCTTATGGGATGGCCTAATGGAGTAGAGCCTGCCTGACCTGGGGAATCCAGGCCTCTCATGCA----TGAAGCTG-----GGCAATAGCTCGTACCCACC-CTACTCGGCCTC-----GGGCTCCTTGGGGGACTC-------------CCCTGCCACAAGAGGATCTGTCCT------------GGGTACTTTGAGTGGAGTAAACTATAGAGAGT--GGGGCATTAGGG------------TGATCTAGGAGAGCCACCCTT---GCCCACCACCTGGCCAGGGCC----GGACTGAT-------GTGGGCT----GTCTGT-AAGTCCAAGAGGAAACTCACAAATTCTGAGCTATGCAGCAGATATGAGTCCTGCTGCAACACAGTGGTCTTT- i calJac3.chrUn_GL286444 C 0 I 271 s canFam3.chr6 61061340 445 - 77573801 --CACTCTGGTCCCAGAACTCCACCATCCAGGCCCAGAACTCCAAGCTGCACACATAGCCATTGGGTTGAGCTCCAGAGGGGCCAA----GTC-AACCCAGAAAAGCAAGGATGCTCACACAGACGTGGCACTGGCCTCGTCCTTGGCCGGTGGCCGCT-GC-CTCTGCCTCGGGGGGGGTCCCTCAGAGG-CTCCAGGGATACGTCTCCCCACCCCACTCGAAGGTGATCCTACTCAGCCTGAGGATCCTCTGGGTGGTCTGTGCCAGAGGGAGGAAGGGGCATCAGGGCAGGACTGACCCCCGCCAGGGGACTCCTGTGTGCGAGCCCACCAGGTGTGTGTGGTTCTTGGGACTGGCTGCTGGGGTGGGGCCCAGGGCTCTGAAGTCCAGGAGGGAAGCCACACACT-TGAATCAAGCAAGAGGTATG-GCCCTACGTCAACACAGCTGTCCTCT i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2274043 633 - 8137123 I e aotNan1.NW_018514293v1 130322 337 + 376347 I e saiBol1.JH378296 383936 0 - 2409723 C e cebCap1.NW_016107703v1 545268 161 - 2125214 I a score=424613.000000 s hg38.chr7_KI270899v1_alt 173015 71 + 190869 AAAAAGTGTGAATAAATTGAAACTTCATGAAATAGCCTATATTTACAATATCCAGACAAAATTACCtcttt s panTro5.chr7_NW_015973580v1_random 48302 71 - 83720 AAAAAGTGTGAATAAATGGAAACTTCATAAAATAGTCTATATTTACAATATCCAAACAAAATTACCtcttt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 562784 71 + 162613886 AAAAAGTGTGAATAAATTGAAACTTCATAAAATAGTCTATATTTACAATATCCAAACAAAATTACCtcttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 134342 71 - 432965 CAAAAGTGTGAATAAATTGAAACTTCATAAAATAGCCTATATTTACAATATCCAAACAAAATTACCtcttt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 193826 68 + 85365473 CAAAAGTGTGAATAAATTGAAACTTCATAAAATAGTCTATATTTACAATATCCATACAGAATTACCTC--- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34041173 70 + 185818997 ACAAAGTGTGAATGAACTGAAACTTCAT-AAATCATCTAAATTTACAATATCCAAACAGAACTACCtcttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33657125 70 + 192294377 ACAAAGTGTGAATGAACTGAAACTTCAT-AAATCATCTAAATTTACAATATCCAAACAGAACTACCtcttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4424820 70 - 9440265 ACAAAGTGTGAATGAACTGAAACTTCAT-AAATCGTCTAAATTTACAATATCCAAACAGAACTACCtcttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17014757 70 - 21915920 ACAAAGTGTGAATGAACTGAAACTTCAT-AAATCGTCTAAATTTACAATATCCAAACAGAACTACCtcttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 146999 70 - 21531802 ACAAAGTGTGAATGAATTGAAACTTCAT-AAATCCTCTAAATTTACAATATCCAAACAGAATTACCtcttt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 181596 70 - 2515279 ACAAAGTGTGAATGAACTGAAACTTCAT-AAATCGTCGAAATTTACAATATCCAAACAGAACTACCtcttt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 339203 63 + 6586416 ACAAAGTGTGAATGAATTGAAACTTCAT-AAATAGTCTAAATTTA-------CAAACAGAACTACCtcttt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 69870 71 + 138751 aaaaaGTGTGAATAAATTGAATCTTCAGAAAATAATCTATATTTACAATATCCAAACAGAATTATGtcttt i calJac3.chrUn_GL286444 I 271 C 0 s canFam3.chr6 61061785 71 - 77573801 ACAGAATGTGTATCAGTGGAAACTTTACCAAATACTCAGTATTTAAAATATGCAAACCCAACTATCCCTTT i canFam3.chr6 C 0 I 3227 e otoGar3.GL873611 2274043 633 - 8137123 I e aotNan1.NW_018514293v1 130322 337 + 376347 I e saiBol1.JH378296 383936 0 - 2409723 C e cebCap1.NW_016107703v1 545268 161 - 2125214 I a score=6424989.000000 s hg38.chr7_KI270899v1_alt 173086 1055 + 190869 ttgtcttttatttatttagttactgagagagggtctcgctctgtcacccaggctgggtgcagtcacggctgactacagcctcgaactctcagacccagaggtcctcgtgcctcagcctcctgagtagctgggaccacaggtgggaaccaccaggcccagctaGAATGCTTTAAAAAGAGTCATCTAAGG----cagaggtagaagttacagctctagggcccaagtcagcctctgtttttgtccaacagagggctaaaaatgatgtttatatctttaaatagttggaaaatcaagagactattttgtgacatgtgaaacttataggaaattcaaattttagcatccataaacaaggagatgt-ggggacacagccacacacactcatcac----gtgggtcgaaggctgctctgggccacagcggcagaggtgagcgtttgcaccagaggcagagtgacctcgaggcctgaagcacaccgtccagcccttcacagaGCGGCGTGCCAGCCCAGCTCTCGGGCTCCCTGGCAAGGCTGGAGCCGCAAGGGGCT---------CGAGTTTCCCCTGCCCGCAGCCCCCATAACTGGAAGCTGGCTCGCCC-AGTGCCCTGATCCCAC----------CCGCCGGCCCCTTCCTGTCCACACATCCCCGCTTTTCCCTGGAAGCCTTTGGTGACAAGTGCAGACACTCTGCCCCTCATCGTCTGGGGTCCTTGGCCGCCTCTCACCTGTCCCCCAGGTGGCAGGTGAGGCCCTCGGGTCCACTCTGAAGGTGATGGGCTGATGCTCCAGGCCGGACATCAGGCTCCGTGACAGCTGGTTCTACACCGTCTTCTCCGGCTGTCCCTGGGGTCACGCCCCTCTCCTGCTGCAGAAACTTGGGTTTCCTCCGTGAGGCTTAAATGAGAGCAGCCTCAGGACAGAT--------------------------------GTCCAGGAAAGGCCAAGAGAACTCAAGCTTGACTGTTCCTCAAGCCTGCTCTTGACAGACAGAAGTGGGTTGGGTGAATCTGAGGAAGAGGGGAGAGGGCCTCGCCCCATGGGGCAGGCTTGTTACCGTCAGGAC-GGGGCTGCTT s panTro5.chr7_NW_015973580v1_random 48373 1053 - 83720 ttgtcttttatttatttagttactgagagagggtctcgctctgtcacccaggctgggtgcagtcacggctgactacagcctcgaactctcagacccagaggtcctcgtgcctcagcctcctgagtagctgggaccacaggtgggaaccaccagacccagctaGAATGCTTTAAAAAGAGTCATCTAAGG----cagaggtagaagttacagctctagggcccaagtcagcctctgtttttgtcgaacagagcgctaaaaatgatgtttatatctttaaatagttggaaaatcaagagactattttgtgac--gtgaaacttataggaaattcaaattttagcatccataaacaaggagatgt-ggggacacagccacacacactcatcac----gtgggtcgaaggctgctctgggccacagcagcagaggtgagcgtttgcaccggaggcagagtgacctcgaggcctgaagcacaccgtccagcccttcacagaGCGGCGTGCCAGCCCAGCTCTCAGGCTCCCTGGCAAGGCTGGAGCCGCAAGGGGCT---------CGAGTTTCCCCTGCCCACAGCCCCCATAACTGGAAGCTGGCTCGCCC-AGTGCCCTGATCCCAC----------CCGCCGGCCCCTTCCTGTCCACACATCCCCGCTTTTCCCTGGAAGCCTTTGGTGACAAGTGCAGACACGCTGCCCCTCATCGTCTGGGGTCCTTGGCTGCCTCTCACCTGTCCCCCAGGTGGCAGGTGCGGCCCTCGGGTGCACTCTGAAGGTGATGGGCTGATGCTCCAGGCCGGACATCAGGCTCCGTGACAGCTGGTCCTACACCGTCTTCTCCGGCTGTCCCTGGGGTCACGCCCCTCTCCTGCTGCAGAAACCTGGGTTTCCTCCGTGAGGCTTAAATGAGAGCAGCCTCAGGACAGAT--------------------------------GTCCAGGAAAGGCCAAGAGAACTCAAGCTTGACTGTTCCTCAAGCCTGCTCTTGACAGAGAGAAGTGGGTTGGGTGAATCTGAGGAAGAGGGGAGAGGGCCTCGCCCCATGGGGCAGGCTTGTTACCGTCGGGAC-GGGGCTGCTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 562855 1087 + 162613886 ttgtcttttatttatttagttactgagagagggtctcactctgtcacccaggctgggtgcagtcacggctgactacagcctcgaactctcagacccagaggtcctggtgcctcagcctcctgagtagctgggaccacaggtgggaaccaccaggcccagctaGAATGCTTTAAAAAGAGTCATCTAAGG----cagaggtagaagttacagctctagggcccaagtcagcctctgtttttgtcgaacagagggctaaaaatgatgtttatatctttaaatagttggaaaatcaagagactattttgtgacatgtgaaacttataggaaattcaaattttagcatccataaacaaggagatgt-ggggacacagccacacacactcatcac----gtgggtcgaaggctgctctgggccacagcagcagaggtgagcgtttgcaccggaggcagagtgacctcgaggcctgaagcacaccgtccagcccttcacagaGCGGCGTGCCAGCCCAGCTCTCAGGCTCCCTGGCAAGGCTGGAGCCGCAAGGGGCT---------CGAGTTTCCCCTGCCCGCAGCCCCCATAACTGGAAGCTGGCTCGCCC-AGTGCCCTGATCCCAC----------CCGCCGGCCCCTTCCTGTCCACACATCCCCGCTTTTCCTTGGAAGCCTTTGGTGACAAGTGCAGACACGCTGCCCCTCATCGTCTGGGGTCCTTGGCCGCCTCTCACCTGTCCCCCAGGTGGCAGGTGCGGCCCTTGGGTACACTCTGAAGGTGATGGGCTGATGCTCCAGGCCGGACATCAGGCTCCGTGATAGCTGGTCCTACACCATCTTCTCCGGCTGTCCCTGGGGTCACGCCCCTCTCCTGCTGCAGAAACTTGGGTTTCCTCCGTGAGGCTTAAATGAGAGCAGCCTCAGGACAGATGTCCAGGAAAGGCCAAGAGAACTCAAGCTTGAGTCCAGGAAAGGCCAAGAGAACTCAAGCTTGACTGTTCCTCAAGCCTGCTCTTGACAGAGAGAAGTGGGTTGGGTGAATCTGAGGAAGAGGGGAGAGGGCCTCACCCCATGGGGCAGGCTTGTTACCGTCGGGAC-GGGGCTGCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 134413 1051 - 432965 ttgtcttttatttatttagttactgagagagggtctcgctctgtcacccaggctgggtgcagtcacggctgactacagcctggaactctcagacccaggggtcctcgtgcctcagcct-ctgagcagctgggaccacaggtgggaaccaccaggcccagctaGAATGCTTTAAAAAGAATCATCTAAGG----cagaggtagaagttacagctctagggcccaagtcagcctctgtttttgtcgaacagagggctaaaaatgatgttcatatctttaaatagttggaaaatcaagagactattttgtggcatgtgaaacttataggaaattcaaattttagcatccataaacaaggagatgt-ggggacacagccacacacactcatcac----gcgggtcgaaggctgctctgggccacagcggcagaggtgagcgtttgcaccagaggcagagtgacctcgaggcctgaagcacaccgtccagcccttcacagaGCGGCGTGCCAGCCCAGCTCTCAGGCTCCCTGGCAAGGCTGGAGCCGCAAGGGGCT---------CGAGTTTCCCCTGCCCGCAGCCCCCATAACTGGAAGCTGGCTCGCCC-AGTGCCCTGATCCCAC----------CCGCCGGCCCCTTCCTGTCCACACATCTCCACTTTTCCCTGGAAGCCTTTGGTGACAAGTGCAGACACGCTG-CCCTCATCGTCTGGGGTCGTTGGCCGCCTCTCACCTGTCCCCCAGGTGGCAGGTGCGGCCCTCGGGTCCACTCTGAAGGTGACGGGCTGATGCTCCAGGCCGGACGTCAGGCTCCGTGACAGCTGGTCCTACACCGTCTTCTCCGGCTGTCCCTGGGGTCACGCCCCTCTCCTGCTGCAGAAACCTGGGTTTCCTCCATGAGGCTTAAATGAGAGCAGCTTCAGGACAGA---------------------------------GTCCAGGAAAGGCCAAGAGAACTCAAGCCTGACTGTTCCTCAAGCCTGCTCTTGACAGAGAGAAGTGGGTTGGGTGAATCTGAGGAAGAGGGGAGAGGGCCTCGCCCCAT-GGGCAGGCTTGTTACCATCGGGAC-AGGGCTGCTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 193894 1039 + 85365473 -TGTTTTAAA---AtttagttattgagagagggtctcgctctgtcacccaggctgggtgcagtcacggctgactacagcctcgaactctcagacccagggctcctcgtgcctcagcctcctgagtagctgggaccacaggtgggaaccaccaggcccagctaGAATGCTTTAAGAA-AATCATCTAAGGTGCAcagaggtagaagctacagctctagggcccaagtcagcc-ctgtttttgtcaaacagagggctaaaaatgatttttatatctttaaatagttggaaaatcaagagactattttgtgacatgtgaaacttacaggaaattcaaattttagcatccataaacaagaagatgt-ggggacacagccacacacattcatcac----gtgggtcgaaggctgctctgggccacagcggcagaggtgagcgtttgcaccggaggcagagcgacctcaaggcctgaaacacactgtccagcccttcacagaGCAGCGTGCCAGCCCAGCTCTCAGGCTCCTTGGCAAGGCTGGAGCCCCAAGGGGCT---------GGAGTTTCCCCTGACCACAGCCCCCATAACCGGAAGCCGGCTTGCCC-AGTGCCCTGATCCCAC----------CCACCGGCCCCTTCCTGTCCATACATCCCCGCTTTTCCCTGGAAGCCTTTGGTGACAAGTGCAGACACACTGCCCCTCATCGTCTGGGGTCCTTGGCTGCCTCTCACCTGTCCGCCAGGTGGCAGGTGCGGCCCTCGGGCCCACTCTGAAGGTGATGGGCTGATGCTCCGGGCCGGACATCAGGCTCCGTGACGGCTGGTCCTACACCGTCTTCTCTGGCT---------GTCATGCCCCTCTGCTGCTGCAGAAACCTGGGTTTCCTACGTCAGGCTTAAATGAAAGCAGCCTCAGGACAGAA--------------------------------GTCCAGGAAAGGCCAAGAGAACTCAAGCTTGACTGTTCCTCAAGCTTGGTCTTGACAGAGAGAAG-----TGGGTAAATCTGAGGAACAGGGGAGAGGGCCTCACCCCATGGGGCAGGCTTGTTACCGTCGGGAC-GAGGCTGCTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34041243 1067 + 185818997 ttaagatttatttatttagttatcgagagagggtctcgctctgtca-ccaggctgggtgcaatcgtggctgactgcagccgcgaactctcagacccaggggtcctcgtgcctcagtcttctgagtagctgggaccacaggtgggaaccaccaggcccagctaaAATGCCTTAAAAAGAATCATCTAAGG----cagaggtagaagctacagctccagggcccaagtcagcctctgtttttgtcgcacagggggctaaaaatgatttttgtatctttaaatggttggaaaatcaagagactattttgtgacatgtgaaacttataggaaattcaaattttagc-tccataaacaaggaaaggtggggggcacagccacacgcactcatcgt----gtgtgtcgaagtctgctctgagccacagcggcagacgtgagtgttttcactggaggcagagtgacctcacggcctgaaaCGCACCGTCC-TCCCTTCACACAGCAGTGTGTCCGCCCAGTTCTCAGGCTCCTTGGCAAGGCTGGAGCCCCAAGGGGCTTCCTACCCCCGAGTTTCCCCTGCCCGCAGACCCCATAACCAGAAGCCGGCTCGCCC-GGTGCCCTGATCCCACCCTGTCCATGCCACGGTCCCCTTCCTGTCCACACATCCCAGGTCTTCCCTGGCAGCCTTTGGTGACAAGTGCAGACACGCTGCCCCTCGTCGTCTGGGGTCCTTGGTCGCCTCTCACCTGTCACCCAGGTGGCAGGTGCGGCCCTCGGGCCCACTCTGAGGGTGATGGGCTGATGCTCCCGGATGGACGTCAGGCTCCGTGACGGCTGGTCCTACACGGTCTTCCCCAGCTGTCCCTGAGGCCACGCCCCTCTCCTGCTGCAGAAACCTGGGTTTCCTATGCCAGGCTTAAATGAAAGCAGCCTCGGGACAGAA--------------------------------GTCCAAGAAAGGCCAAGAGGACTCCAGCTTGATTGTTCCTCAAGCCTGCTCTTGGCAGAGAGAAC-----CGGGTAAATCTGAGGAACTGGGGAGAGGGCCTTGCCCCAT-GGGCAGGATTGTCACTGCCAGGACAGGGGCTGCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33657195 1067 + 192294377 tttagatttatttatttagttatcgagagagggtctcgctctgtca-ccaggctgggtgcaatcgtggctgactgcagccgcgaactctcagacccaggggtcctcgtgcctcagtcttctgagtagctgggaccacaggtgggaaccaccaggcccagctaaAATGCCTTAAAAAGAATCATCTAAGG----caggggtagaagctacagctccagggcccaagtcagcctctgtttttgtcgcacagggggctaaaaatgatttttgtatctttaaatggttggaaaatcaagagactattttgtgacatgtgaaacttataggaaattcaaattttagc-tccataaacaaggaaaggtggggggcacagccacacgcactcatcgt----gtgtgtcgaagtctgctctgagccacagcggcagacgtgagtgttttcactggaggcagagtgacctcacggcctgaaaCGCACCGTCC-TCCCTTCACACAGCAGTGTGTCCGCCCAGTTCTCAGGCTCCTTGGCAAGGCTGGAGCCCCAAGGGGCTTCCTACCCCCGAGTTTCCCCTGCCCGCAGACCCCATAACCAGAAGCCGGCTCGCCC-GGTGCCCTGATCCCACCCTGTCCATGCCACGGTCCCCTTCCTGTCCACACATCCCAGGTCTTCCCTGGCAGCCTTTGGTGACAAGTGCAGACACGCTGCCCCTCGTCGTCTGGGGTCCTTGGTCGCCTCTCACCTGTCACCCAGGTGGCAGGTGCGGCCCTCGGGCCCACTCTGAGGGTGATGGGCTGATGCTCCCGGATGGACGTCAGGCTCCGTGACGGCTGGTCCTACACGGTCTTCCCCAGCTGTCCCTGAGGCCACGCCCCTCTCCTGCTGCAGAAACCTGGGTTTCCTATGCCAGGCTTAAATGAAAGCAGCCTCGGGACAGAA--------------------------------GTCCAAGAAAGGCCAAGAGGACTCCAGCTTGATTGTTCCTCAAGCCTGCTCTTGGCAGAGAGAAC-----CGGGTAAATCTGAGGAACTGGGGAGAGGGCCTTGCCCCAT-GGGCAGGATTGTCACTGCCAGGACAGGGGCTGCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4424890 1067 - 9440265 tttagatttatttatttagttatcgagagagggtctcgctctgtca-ccaggctgggtgcaatcgtggctgactgcagccgcgaactctcagacccaggggtcctcgtgcctcagtcttctgagtagctgggaccacaggtgggaaccaccaggcccagctaaAATGCCTTAAAAAGAATCATCTAAGG----caggggtagaagctacagctccagggcccaagtcagcctctgtttttgtcgcacagggggctaaaaatgatttttgtatctttaaatggttggaaaatcaagagactattttgtgacatgtgaaacttataggaaattcaaattttagc-tccataaacaaggaaaggtggggggcacagccacacgcactcatcgc----gtgtgtcgaaggctgctctgagccacagcggcagacgtgagtgttttcactggaggcagagtgacctcacggcctgaaaCGCACCGTCC-TCCCTTCACACAGCAGTGTGTCCGCCCAGTTCTCAGGCTCCTTGGCAAGGCTGGAGCCCCAAAGGGCTTCCTACCCCCGAGTTTCCCCTGCCCGCAGACCCCATAACCAGAAGCCGGCTCGCCC-GGTGCCCTGATCCCACCCTGTCCATGCCACGGTCCCCTTCCTGTCCACACATCCCAGGTCTTCCCTGGCAGCCTTTGGTGACAAGTGCAGACATGCTGCCCCTCGTCGTCTGGGGTCCTTGGTCGCCTCTCACCTGTCACCCAGGTGGCAGGTGCGGCCCTCGGGCCCACTCTGAGGGTGATGGGCTGATGCTCCCGGATGGACATCAGGCTCCGTGACGGCTGGTCCTACACGGTCTTCCCCCACTGTCCCTGAGGCCACGCCCCTCTCCTGCTGCAGAAACCTGGGTTTCCTATGCCAGGCTTAAATGAAAGCAGCCTCGGGACAGAA--------------------------------GTCCAAGAAAGGCCAAGAGGACTCCAGCTTGATTGTTCCTCAAGCCTGCTCTTGGCAGAGAGAAC-----CGGGTAAATCTGAGGAACCGGGGAGAGGGCCTTGCCCCAT-GGGCAGGATTGTCACTGCCAGGACAGGGACTGCTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17014827 1066 - 21915920 tttagatttatttatttagttatcgagagagggtctcgctctgtca-ccgggctgggtgcaatcgtggctgactgcagccgcgaactctcagacccaggggtcctcgtgcctcagtcttctgagtagctgggaccacaggtgggaaccaccaggcccagctaaAATGCCTTAAAAAGAATCATCTAAGG----caggggtagaagctacagctccagggcccaagtcagcctctgtttttgtcgcacagggggctaaaaatgatttttgtatctttaaatggttggaaaatcaagagactactttgtgacatgtgaaacttataggaaattcaaattttagc-tccataaacaaggagaggt-gggggcacagccacacgcactcatcgc----gtgtgtcgaaggctgctctgagccacagcggcagacgtgagtgttttcactggaggcagagtgacctcacggcctgaaaCGCACCGTCC-TCCCTTCACACAGCAGTGTGTCCGCCCAGTTCTCAGGCTCCTTGGCAAGGCTGGAGCCCCAAGGGGCTTCCTACCCCCGAGTTTCCCCTGCCCGCAGACCCCATAACCAGAAGCCGGCTCGCCC-GGTGCCCTGATCCCACCCTGTCCATGCCATGGTCCCCTTCCTGTCCACACATCCCAGGTCTTCCCTGGCAGCCTTTGGTGACAAGTGCAGACACGCTGCCCCTTGTCGTCTGGGGTCCTTGGTCACCTCTCACCTGTCACCCAGGTGGCAGGTGCGGCCCTCGGGCCCACTCTGAGGGTGATGGGCTGATGCTCCCGGACGGACGTCAGGCTCCGTGATGGCTGGTCCTACACGGTCTTCCCCCGCTGTCCCTGAGGCCACGCCCCTCTCCTGCTGCAGAAACCTGGGTTTCCTACGCCAGGCTTAAATGAAAGCAGCCTTGGGACAGAA--------------------------------GTCCAAGAAAGGCCAAGAGGACTCCAGCTTGATTGTTCCTCAAGCCTGCTCTTGGCAGAGAGAAC-----CGGGTAAATCTGAGGAACCGGGGAGAGGGCCTTGCCCCAT-GGGCAGGATTGTCACCGCCAGGACGGGGGCTGCTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 147069 1061 - 21531802 tttagatt----tatttagttatcgagagagggtctcgctctgtca-ccagaccgggtgcaatcgcggctgactgcagcctcgaactctcagacccaggggtcctcgtggctcagtctcctgagtagctgggaccacaggtgggaaccaccaggcccagctaaAATGCCTTAAAAAGTATCATCTAAGG----caggggcagaagctacagctccagggcccaagtcagcctctgtttttgtcgcacagggggct-aaaatgatttttgtatctttaaatggttggaaaatcaagagactattttgtgacctgtgaaacttacaggaaattcaaattttagc-tccataaaccaggagaggt-gggggcacagccacacgcactcatcgc----gtgtgtcgaaggcggctctgggccacagcggcagacgtgagtgttttcaccggaggcagagtgacctcacggcctgaaaCGCACCGTCC-TCGCCTCACACAGCAGCGTGTCCGCCCAGTTCCCAGGCTCCTTGGCAAGACTGGAGCCCCAAGGGGCTTCCTACCCCCGAGTTTCCCCTGCCCTCAGCCCCCATAACCAGAAGCCGGCTCGCCC-AGTGCCCTGATCCCACCCGGTCCGTGCCACGGTCCCCTTCCTGTCCACACATCCCAGGTCTTCCCTGGCAGCCTTTGGTGACAAGTGCAGACACGCTGCCCCTCGTCGTCTGGGGTCCTTGGCCACCTCTCACCCGTCCCCCAGGTGGCAGGTGCGGCCCTCGGGCCCACTCTGAGGGTGATGGGCTGATGCTCCCGGACGGACGTCAGGCTCCGCGACGGCTGGTCCTACACGGTCTTCCCCGGCTGTCCCTGAGGCCACGCCCCTCTCCTGCTGCAGAAACCTGGGTTTCCTACGCCAGGCTTAAATGAAAGCAGCCTCGGGACAGAA--------------------------------GTCCAAGAAAGGCCCAGAGAAGTCAAGCTTGATTTTTCCTCCAGCCTGCTCTTGGCAGAGAGAAC-----CGGGTAAATCTGAGGAACCGGGGAGAGGGCCTCGCCCCAT-GGGCAGGATTGTCACCGCCAGGACGGGGGCTGCTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 181666 1066 - 2515279 tttagatttatgtatttagttatcgagagagggtctcgctctgtca-ccaggctgggtgcaatcgtggctgactgcagccgcgaactctcagacccaggggtcctcgtgcctcagtcttctgagtagctgggaccacaggtgggaaccaccaggcccagctaaAATGCCTTAAAAAGAATCATCTAAGG----caggggtagaagctacagctccagggcccaagtcagcctctgtttttgtcgcacagggggctaaaaatgatttttgtatctttaaatggttggaaaatccagagactattttgtgacatgtgaaacttataggaaattcaaattttagc-tccataaacaaggagaggt-gggggcacagccacacgcactcatcgc----gtgtgtcgaaggctgctctgagccacagcggcagacgtgagtgttttcactggaggcagagtgacctcatggcctgaaaCGCATCGTCC-TCCCTTCACACAGCAGTGTGTCCACCCAGTTCTCAGGCTCCTTGGCAAGGCTGGAGCCCCAAGGGGCTTCCTACCCCCGAGTTTCCCCTGCCCGCAGACCCCATAACCAGAAGCCGGCTCGCCC-GGTGCCCTGATCCCACCCTGTCCATGCCACGGTCCCCTTCCTGTCCACACATCCCAGGTCTTCCCTGGCAGCCTTTGGTGACAAGTGCAGACATGCTGTCCCTTGTCGTCTGGGGTCCTTGGTCGCCTCTCACCTGTCACCCAGGTGGCAGGTGCGGCCCTCGGGCCCACTCTGAGGGTGATGGGCTGATGCTCCTGGACGGACATCAGGCTCCGTGATGGCTGGTCCTACACGGTCTTCCCCCGCTGTCCCTGAGGCCACGCCCCTCTCCTGCTGCAGAAACCTGGGTTTCCTACGCCAGGCTTAAATGAAAGCAGCCTTGGGACAGAA--------------------------------GTCCAAGAAAGGCCAAGAGGACTCCAGCTTGATTGTTCCTCAAGCCTGCTCTTGGCAGAGGGAAC-----CGGGTAAATCTGAGGTACCGGGGAGAGGGCCTTGCCCCAT-GGGCAGGATTGTCACCGCCAGGACGGGGGCTGCTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 339266 1051 + 6586416 tttagattcatttatttagttatcgagagagggtctcgctctgtca-ccaggctgggtgcgatcgtggctaactgcagcctcgaactctcagacccgggggtcctcgtgcctcagtctcctgagtagctgggaccacaggtgggaaccaccaggcccagctaaAATGCCTTAAAAAGAATCATCTAAGG----caggggtagaagctacagctctagggcccaagtcagc--ctgtttttgtcgcacagagggctaaacatgagttttgtatctttaaatggttggaaaatcaagagattattttgtgacatgtgaaacttacaggaaattcaaattttagc-tccataaacaaggagaggt-gggggcacagccgcacgcactcattgc----gcgtgtcgaaggctgccctgggtctcagcggcagaggtgagtgttttcaccggaggcagagtgacctcacggcctgaaataCACCGTCC-TCCCCTCACAGAGCAGCGTGCCTGCCCAGCTCCCAGGCTCCTTGGCAAGGCTGGAGCCCCAAGGGGCTTCCTACCCTCGAGTTTCCCCCGCCCGCAGCCCCCATAACCAGAAGCCGGCTCGCCC-GGTGCCCTGATCCCACCCGGTCCATGCCATGGT-CCCTTCCTGTCCACACATCCCAGGTCTTCCCTGGCAGCCTTTGGTGACAAGCGCAGACACGCTGCCCCTCATTGTCTGGGGTCCTTGGTCGCCTCTCACCTGTGCCCCAGATGGCAGGTGCGGCCCTC-------------GGGTGATGGGCTGATGCTCCTGGACGGACGTCAGGCTCCGTGACGGCTGATCCTACAGGGTCTTCCCCGGCTGTCCCTGAGGCCACGCCCCTCTCCTGCTGCGGAAACCTGGGTTTCCTACGCCAGGCCTAAATGAAAGCAGCCTCAGGACAGAA--------------------------------GTCCAAGAAAGGTTGAGAGAACTCAAGTTTGATTGTTCCTCAAGCCTGCTCTTGGCAGAGAGAAC-----CGGGTAAATCTGAGGAATCGGGGAGAGGGCCTCGCCCCACGGGGCAGGATGGTTACCGCCAGGACAGGGGCTGCTT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 69941 1028 + 138751 tt--actttatttgtttagttattgagagagggtcttactctgtcacccaggctgagtgcaatcacgactcactgcagcctcaaactctcagacccagaggtcctcgtgcctcagcctcctgagtagctgggaccacaggtgggaaacaccaggtccagctaGAATACTTCCAAAAGAATCATCTAAGG----caggggtggaagctacagctttagggcctaattcagcctctgtttttgttgaatagaaggctaaaaatgatttttatacctttaaatggttgaaaaatgaagag--tattttgtgacgtg-aaaacttatagaaaatgcaaattttagcatccataaacaagt--atgt--gggacacagccacacgcactcaccacatttatgtatctaaggctgctctgggccacagcggcagaggtgagtgtctgcaccagaggcagagtgacctcaagg-ctgaaacacaccatccagcccttcacagaGCAGCGTGACAGCCCAGCTCTCAGGCTCCTTGTCAAGGCTGGAGCCCCAGTGGGCTTTCTATCCTTGGGTTTCCCCTGCCCGCAGCCCCCATCATTGGAAGCTGGCTGGCCCAGGTGCCCTAATCCCAC----------------------------CCACACATCCCAGCTCTTCCCTGGAAGTCTTTGATGACAAGCACAGCCATGTTGTCCCTCATCATCCGGGGTCGTTGGCCGCCTCTGGCCTGTCCCCCAGGTGGCAAGTGCAGCCCTAGGGCCCA-TCTGAAGGTGATGGGCTGATGCTCTGGGCAGGATGTCAGGCTCTGTGACAGCTGGCCCTACACA---TGCTCTTGCCG-----GGGGCCACGCCCCTCTCCTGCTGCAGAAACCTAGGTTTCCTATGTCAAGCATACATGAAGGCAACCTCAGGACAGAA--------------------------------GTCCAAGAAAGGCCATGAGATCTCAAGCTTGAATATTCCTCAAGCCTGCTCTTGGCAGAGAGAAG-----TGGGTAAATCTGAGGAACAGGAGATAGGGCCTAGCCCCATAGGGCAGGCTTGTTATCACT-GGACAGGGGCTGCTT i calJac3.chrUn_GL286444 C 0 C 0 e otoGar3.GL873611 2274043 633 - 8137123 I e canFam3.chr6 61061856 3227 - 77573801 I e aotNan1.NW_018514293v1 130322 337 + 376347 I e saiBol1.JH378296 383936 0 - 2409723 C e cebCap1.NW_016107703v1 545268 161 - 2125214 I a score=1003860.000000 s hg38.chr7_KI270899v1_alt 174141 165 + 190869 TGGGT-GCTGAGTCCTGGAAGCCGCTCGGACCCATCCATGACTTCTTATGTGTGCTGTCGGCAGCTGACCAGCGGCCACGCTATCCTGGACGCGTGGGGATGGAGCTACGGGGAGGGTGCGGTGGTGACTGC-TCCACTGCAGAGCCAGGTATCGCCAGGGGCGCCA- s panTro5.chr7_NW_015973580v1_random 49426 165 - 83720 TGGGT-GCTGAGTCCTGGAAGCCGCTCGGACCCATCCATGACTTCTTATGTGTGCTGTCGGCAGCTGACCAGCAGCCACACTATCCTGGATGCGTGGGGATGGAGCTACGGGGAGGGTGCGGTGGTGACTGC-TCCACTGCAGAGCCAGGTATCGCCAGGGGCGCCA- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 563942 165 + 162613886 TGGGT-GCTGAGTCCTGGAAGCCGCTCGGACCCATCCATGACTTCTTATGTGTGCTGTCGGCAGCTGACCAGCGGCCACACTATCCTGGACGTGTGGGGATGGAGCTACGGGGAGGGTGCGGTGGTGACTGC-TCCACTGCAGAGCCAGGTATCGCCAGGGGCGCCA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 135464 167 - 432965 TGGGTGGCTGAATCCTGGAAGCCGCTCGGACCCATCCATGACTTCTTATGTGTGCTGTCGGCAGCTGACCAGCGGCCACACTATCCTGGACGCGTGGGGATGGAGCTACGGGGAGGGTGCAGTGGTGACTGCTTCCACTGCAGAGCCAGGTATCGCCAGGGGCGCCA- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 194933 164 + 85365473 TTGGT-GCTGAGTCCTGGAAGCCACTTGGACCCATCCACAACTTCTTATGTGTGCTGCCGGCAGCTGACCAGCGGCCACACTATCCTGGACACGTGGGGATGGAGCTACGGGGA-GGTGCGGTGGTGACTGC-TCCACTGCAGAACCAGGTATCGCCAGGGGCACCG- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042310 155 + 185818997 TGGGT-GCCGAGTCCTGGAAGCTGCTTGGACCCATCCACAACTTCTTCTGTGTGCTGCCGGCAGCTGACCAGCGGCCACAC-ATCCTGGACGCGTGGGGATGGAGCCACGGGCAGGGTACAGTGGCAACCGC---------AGAGCTGGGGCTTCCCAGGGGCACC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33658262 155 + 192294377 TGGGT-GCCGAGTCCTGGAAGCTGCTTGGACCCATCCACAACTTCTTCTGTGTGCTGCCGGCAGCTGACCAGCGGCCACAC-ATCCTGGACGCGTGGGGATGGAGCCACGGGCAGGGTACAGTGGCAACCGC---------AGAGCTGGGGCTTCCCAGGGGCACC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4425957 155 - 9440265 TGGGT-GCCGAGTCCTGGAAGCCGCTTGGACCCATCCACAACTTCTTCTGTGTGCTGCCGGCAGCTGACCAGCGGCCACAC-ATCCTGGACGCGTGGGGATGGAGCCACGGGCAGGGTACAGTGGCAACCGC---------AGAGCTGGGGCTTGCCAGGGGCACC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17015893 155 - 21915920 TGGGT-GCCGAGTCCTGGAAGCCGCTTGGACCCATCCACGACTTCTTCTGTGTGCTGCCGGCAGCTGACCAGCGGCCACAC-ATCCTGGACGCGTGGGGATGGAGCCACGGGCAGGGTACAGTGGCAACCGC---------AGAGCTGGGGCTTGCCAGGGGCACC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148130 155 - 21531802 TGGGT-GCCGAGTCCTGGAAGCCACTTGGATCCATCCACGACTTCTTCTGTGTGCTGCTGGCAGCTGACCAGCGGCCACAG-ATCCTGGACACGTGGGGATGGAGCCACGGGCAGGGTGCAGTGGCAACCAC---------AGAGCTGGGGCTCGCCAGGGGCACC-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 182732 155 - 2515279 TGGGT-GCCGAGTCCTGGAAGCCGCTTGGACCCATCCACGACTTCTTCTGTGTGCTGCCGGCAGCTGACCAGCGGCCACAC-ATCCTGGACGCGTGGGGATGGAGCCACAGGCAGGGTACAGTGGCAACCGC---------AGAGCTGGGACTTGCCAGGGGCACC-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340317 155 + 6586416 TGGGT-GCCGAGTTCTGGACGCCGCTTGGATCCATCCGTGACTTCTTATGTGTGCTGCCGGCAGCTGACCAGCGGCCACAC-ATCCTGGACGCGTGGGGATGGAGCCACGGGCAGGGTGCAGTGGCAACCAC---------AGAGCTGGGGCTCTCCAGGGGCACC-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 70969 163 + 138751 TGGGT-GCTGAGCTATGGAAGATGCTTGGACCCATCGACAGCTTCTTGTATGTGCTGCCAGCAGCTGACCAGTGGCCACACTGTGCTGGGAGCATGGGGATGAAGCTACGGG-AGGATGAGGTGGAGGCTCC-TTCACTC-TGAGCCGGGGCTCACCAGGGGCACC-A i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 383936 161 - 2409723 TGGGT-GCTGAGCTCTGGAAGGTGCTTGGACCCATCGACAGCTTCTTGTATGTGCTGCCGGCAGCTGATCAGTGGCCACACTGTGCTGGAAGCATGAGGATGAAGCTACGGG-AGGATGCAGCGGAGGCGCC-TTCACTC---AGCCGGGGCTCACCAGGGGCACC-G i saiBol1.JH378296 C 0 I 1 e otoGar3.GL873611 2274043 633 - 8137123 I e canFam3.chr6 61061856 3227 - 77573801 I e aotNan1.NW_018514293v1 130322 337 + 376347 I e cebCap1.NW_016107703v1 545268 161 - 2125214 I a score=1382206.000000 s hg38.chr7_KI270899v1_alt 174306 190 + 190869 GG-TGAGACCCAGCAGAGACACAGGTGGAAAGGAGTGAGTCCTCCAGGGTCCCCTGAACAGTCAAGTTCCACCCATTCAGTAGCTTCAAAAACAGGCTCACGATTTGG-TGTGGGCCCTGGTCTCCAGCTGGGTTCCCTCACCTTACGGCTCCCCATGGTCACCGGCAACCCAGC-ATCCCACACTCTGGATG s panTro5.chr7_NW_015973580v1_random 49591 190 - 83720 GG-TGAGACCCAGCAGAGACACAGGCGGAAAGGAGTGAGTCCTCCAGGGTCCTCTGAACAGTCAAGTTCTACCCATTCAGTAGCTTCAAAAACAGGCTCACGATTTGG-TGCAGGCTCCGGTCTCCAGCTGGGTTCCCTCACCTTACGGCTCCCCATGGTCACCGGCAACCCAGC-ATCCCACACTCTGGACG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564107 190 + 162613886 GG-TGAGACCCAGCAGAGACACAGGTGGAAAGGAGTGAGTCGTACAGGGTCCTCTGAACAGTCAAGTTCCACCCATTCAGTAGCTTCAAAAACAGGCTCACGATTTGG-TGCAGGCTCCGGTCTCCAGCTGGGTTCCCTCACCTTACGGCTCCCCATGGTCACTGGCAACCCAGC-ATCCCACACTCTGGACG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 135631 190 - 432965 GG-TGAGACCCAGCAGAGACACAGGTGGAAAGGAGTGAGTCCTCCAGGGTCATCTGAACAGTCAAGTTCCACCCATTCAGTAGCTTCAAAAACAGGCTCACGATTTGGCTGCAGGC-CCGGTCTCCAGCTGGGTTCCCTCACCTTACGGCTCCCCATGGTCACGGGCAACCCAGC-ATCCCACACTCTGGATG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195097 191 + 85365473 GGATGAGGCCCAGCAGAGACACAGGTGGAAAGGAGTGAGTCCTCTAGGGTCGTCTGAACAGCCGTGTTCCACCCATTCGGTAGCTTCAAAAACAGGCTCACGATTTGGCTACAGGCCCCGGTCTCCGGCTCGGTTCCCTCACCTTG-GGCTCCCCATGGTCATGGGCAACACAGC-ATCCCACACTCTAGATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042465 187 + 185818997 GG-TGGGGCCCAGCAGAGGCACCCATGGAAAGGAGTGAGTCCTCCAGGGCCGTCTAAGCAGTCGTGTTCCACCCATTCAGTAGCTTCAAAAACAGGCTCACGGTTTGGCTACAAGCCCAGGTCTCCAGCTCAGTTCCCTCCACCTA-GGCTCCCCGTGGTCATGAAC----CAGCAGTCCCACGTTCCAGATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33658417 191 + 192294377 GG-TGGGGCCCAGCAGAGGCACCCATGGAAAGGAGTGAGTCCTCCAGGGCCGTCTAAGCAGTCGTGTTCCACCCATTCAGTAGCTTCAAAAACAGGCTCACGGTTTGGCTACAAGCCCAGGTCTCCAGCTCAGTTCCCTCACCTTAGGGCTCCCCGTGGTCATGGGCAACACAGC-GTCCCACGTTCCAGATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4426112 191 - 9440265 GG-TGGGGCCCAGCAGAGGCACCCATGGAAAGGAGTGAGTCCTCCAGGGCCGTCTAAGCAGTCGTGTTCCACCCATTCAGTAGCTTCAAAAACAGGCTCACGGTTTGGCTACAAGCCCAGGTCTCCGGCTCAGTTCCCTCACCTTAGGGCTCCCCGTGGTCATGGGCAACACAGC-GTCCCACGTTCCAGATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016048 191 - 21915920 GG-TGGGGCCCAGCAGAGGCACCCATGGAAAGGAGTGAGTCCTCCAGGGCCGTCTAAGCAGTCGTGTTCCACGCATTCAGTAGCTTCAAAAACAGGCTCACGGTTTGGCTACAAGCCCAGGTCTCCGGCTCAGTTCCCTCACCTTAGGGCTCCCCGTGGTCATGGGCAACACAGC-GTCCCACGTTCCAGATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148285 191 - 21531802 GG-TGGGGCCCAGCAGAGGCACCGGTGGAAAGGGCTGAGTCCTCCAGGGCCGTCTAAGCAGTCATGTTCCAACCCTTCAGTAGCTTCAAAAACAGGCTCACGGTTTGGCTGCAGGCCCAGGTCTCCGGCTCGGTTCCCTCACCTTAGGGGTCCCCGTGGTCATGGGCAACGCAGT-GACCCACGTTCTAGATG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 182887 191 - 2515279 GG-TGGGGCCCAGCAGAGGCACCCATGGAAAGGAGTGAGTCCTCCAGGGCCGTCTAAGCAGTCGTGTTCCACCCATTCAGTAGCTTCAAAAACGGGCTCACGGTTTGGCTACAAGCCCAGGTCTCCGGCTCAGTTCCCTCACCTTAGGGCTCCCCGTGGTCATGGGCAACACAGC-GTCCCACGTTCCAGATG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340472 191 + 6586416 GG-TGGGGCCCAGCAGAGGCACCGGTGGAAAGGGGTGAGTCCCCCAGGGCTGTCTAAGCAGTCATGTTCCACCCATTCAGTAGCTTCCAAAAcaggctcacggtttggctacaggcccaggtctccggctcagTTCCCTCACCTTAGGGCTCCCCGTGGTTATGGGCAACACAGC-GTCCCACGTTCTAGATG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71133 189 + 138751 GG-TAAGGCCCAGCAGAGGCA-CAGTGGAAAGGAGCAAGTCCACCCCAGTTGTCTGAACAGTCATGTTCCGCCCATTCAGTAGCTTAAAAAAGAGGCTCATGGTTTGGCTACAGGCCCTGGTCTACAGCCCGGTTCCCTTACGTTAGGGCTCTCCATGGCCATAGGCAGCACAGC-ATCCCATGCTCTAGAT- i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 384098 174 - 2409723 GG-TAAGGCCCAGCAGAGGCACCGGTGGAAACGAGCAAGCCCGCCCC-GTTGTCTAAATAGTCATGTTCCGCCCATTCAGTAGCTTAAAAAAGAGGCTCATGGTTTGGCTACAGGCCCTGGT---------------TCCACGTTAGGGCTTTCCATGGTCACAGGCAACACAAC-ATCCCACGCTCTAGAT- i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 545429 190 - 2125214 GG-TAAGGCCCAGCAGAGGCACAGGTGGAAAGGAGCAAGTCCGCCCCAGTTGTCTGAATAGTCACGTTCCGCCCATTCAGTAGCTTAAAAAAGAGGCTCATGGTTTGGCTACAGGCCCTGGTCTACAGCCCGGTTCCCCCACGTTAGGGTTTTCCATGGTCATAGGCAACACAGC-ATCCCACGCTCTAGAC- i cebCap1.NW_016107703v1 I 161 C 0 e otoGar3.GL873611 2274043 633 - 8137123 I e canFam3.chr6 61061856 3227 - 77573801 I e aotNan1.NW_018514293v1 130322 337 + 376347 I a score=537548.000000 s hg38.chr7_KI270899v1_alt 174496 57 + 190869 GGGGTCAGGAGTGGAGGCGAC---AGGAGGCGAGGAGGCGAGTGGGCGGCACAGACAAGG s panTro5.chr7_NW_015973580v1_random 49781 57 - 83720 GGGGTCAGGAGTGGAGGCGAC---AGGAGGCGAGGAGGTGAGTGGGCGGAACAGACAAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564297 57 + 162613886 GGGGTCAGGAGTGGAGGCGAC---AGGAGGCGAGGAGGTGAGTGGGCGGCACAGACAAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 135821 57 - 432965 GGGGTCAGGAGTGGAGGCGAC---AGAAGGCGAGGAGGTGAGTGGGCGGCACAGACAAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195288 60 + 85365473 GGGGTCAggagtggaggggacaggaggaggtgaggaggtgagtgggtggCACAGACAAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042652 52 + 185818997 GAGGTCAGGAGCGGAGGGGAC---AGGAGGTGAGAGTG-----GGGCAGCGCCGACAAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33658608 57 + 192294377 GAGGTCAGGAGCGGAGGGGAC---AGGAGGTGAGGAGGTGAGTGGGCAGCGCCGACAAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4426303 57 - 9440265 GAGGTCAGGAGCGGAGGGGAC---AGGAGGTGAGGAGGTGAGTGGGCAGCGCCGACAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016239 57 - 21915920 GAGGTCAGGAGTGGAGGGGAC---AGGAGGTGAGGAGGTGAGTGGGCAGCGCCGACAAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148476 57 - 21531802 GGGGTCAGGAGTGGAGGGGAC---AGGAGGTGAGGAGGTGAGTGGGCGGCGCCGACAAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183078 57 - 2515279 GAGGTCAGGAGCGGAGGGGAC---AGGAGGTGAGGAGGTGAGTGGGCAGCGCCAACAAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340663 57 + 6586416 GGGGTCAGGAGTGGAGGGGAC---AGGAGGTGAGGAGGTGAGTGGGCGGCGCCGGCAAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71322 57 + 138751 GGGGTCAGGAGTGGAGGGGAC---AGCAGGTGAGGAGGTGAGTGGGTGGCACAGACATGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384272 57 - 2409723 GGGGTCAGGAGTGGAGGGGAC---AGCAGGTGAGGAGGTGAGTGGGCGGCACAGACAAGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 545619 57 - 2125214 AGGGTCAGGAGTGGAGGGGAC---AGCAGGTGAGGCGGCGAGTGGGCGGCACAGACAAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 130659 57 + 376347 GGGGTCAGGAGTGGAGGGCAC---AGCAGGTGAGGAGGTGAGTGGGTGGCACAGACAAGG i aotNan1.NW_018514293v1 I 337 I 5 e otoGar3.GL873611 2274043 633 - 8137123 I e canFam3.chr6 61061856 3227 - 77573801 I a score=68889.000000 s hg38.chr7_KI270899v1_alt 174553 12 + 190869 AGGGAGCCCACC s panTro5.chr7_NW_015973580v1_random 49838 12 - 83720 AGGGAGCCCACC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564354 12 + 162613886 AGGGAGCCCACC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 135878 12 - 432965 AGAGAGCCCACC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195348 12 + 85365473 AGGGAGCCCACC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042704 10 + 185818997 A-GGAACCCA-C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33658665 12 + 192294377 AGGGAACCCACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4426360 12 - 9440265 AGGGAACCCACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016296 12 - 21915920 AGGGAACCCACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148533 12 - 21531802 AGGGAACCCACC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183135 12 - 2515279 AGGGAACCCACC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340720 12 + 6586416 AGGGAACCCACC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71379 10 + 138751 -GGGAGCCGTC- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384329 11 - 2409723 -GGGCGTCCCCC i saiBol1.JH378296 C 0 I 188 s cebCap1.NW_016107703v1 545676 11 - 2125214 -GGGCGCCCCCC i cebCap1.NW_016107703v1 C 0 I 1 e otoGar3.GL873611 2274043 633 - 8137123 I e canFam3.chr6 61061856 3227 - 77573801 I e aotNan1.NW_018514293v1 130716 5 + 376347 I a score=139373.000000 s hg38.chr7_KI270899v1_alt 174565 24 + 190869 CCTGCTCTAGACAGAGTTTAGGAG s panTro5.chr7_NW_015973580v1_random 49850 24 - 83720 CCTGCTCTAGACAGAGTTTAGGAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564366 24 + 162613886 TCTGCTCTAGACAGAGTTTAGGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 135890 24 - 432965 CCTGCTCTAGACAGAGTTTAGGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195360 24 + 85365473 CATGCTCTAGACAGAGTTTAGGAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042714 24 + 185818997 CATGCTCTAGACAGGGTTTAGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33658677 24 + 192294377 CATGCTCTAGACAGGGTTTAGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4426372 24 - 9440265 CATGCTCTAGACAGGGTTTAGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016308 24 - 21915920 CATGCTCTAGACAGGGTTTAGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148545 4 - 21531802 CAC--------------------G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183147 24 - 2515279 CATGCTCTAGACAGGGTTTAGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340732 24 + 6586416 CATGCTCTAGACAGAGTTTAGGAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71389 22 + 138751 CATGCTCTAGACA--GTTTAGAAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384528 22 - 2409723 CCTGCTCTAAACA--GTTTAGGAT i saiBol1.JH378296 I 188 C 0 s cebCap1.NW_016107703v1 545688 22 - 2125214 TTTCCTCTAGACA--GTTTAGGAT i cebCap1.NW_016107703v1 I 1 C 0 e otoGar3.GL873611 2274043 633 - 8137123 I e canFam3.chr6 61061856 3227 - 77573801 I e aotNan1.NW_018514293v1 130716 5 + 376347 I a score=78045.000000 s hg38.chr7_KI270899v1_alt 174589 7 + 190869 TGGAGGG s panTro5.chr7_NW_015973580v1_random 49874 7 - 83720 TGGAGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564390 7 + 162613886 TGGAGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 135914 7 - 432965 TGGAGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195384 7 + 85365473 TGGAGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042738 7 + 185818997 TGGGAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33658701 7 + 192294377 TGGAGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4426396 7 - 9440265 TGGAGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016332 7 - 21915920 TGGAGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148549 7 - 21531802 TGGAGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183171 7 - 2515279 TGGAGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340756 7 + 6586416 TGGAGGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71411 7 + 138751 TGGAGGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384550 7 - 2409723 TGGAGGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 545710 7 - 2125214 TGGAGGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 130721 7 + 376347 TGGAGGG i aotNan1.NW_018514293v1 I 5 C 0 e otoGar3.GL873611 2274043 633 - 8137123 I e canFam3.chr6 61061856 3227 - 77573801 I a score=897118.000000 s hg38.chr7_KI270899v1_alt 174596 108 + 190869 GACCGAACAAAAGGAATCGTCTTCA------TTTCACCTTCTGGT----A---AGAACAGGCTTTAGCCAAGGAAAGGAGGG------------------------------------------------------GTGGACGTGCAAAGCCCTCCCGTGCGGGAGCCCTGGGAC s panTro5.chr7_NW_015973580v1_random 49881 108 - 83720 GACCGAACAAAAGGAATCATCTTCA------TTTCACCTTCTGGT----A---AGAACAGGCTTTAGCCAAGGAAAGGAGGG------------------------------------------------------GTGGACGTGCAAAGCCCTCCCGTGTGGGAGCCCTGGGAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564397 108 + 162613886 GACCGAACAAAAGGAATCGTCTTca------tttcaccttctggt----a---agaacaggctttagccaaggaaaggaggg------------------------------------------------------atggacaTGCAAAGCCCTCCCGTGTGGGAGCCCTGGGAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 135921 108 - 432965 GACCGAACAGAAGGAATCGTCTTCA------TTTCACCTTCTGGT----A---AGAACAGGCTTTAGCCAAGGAAAGGAGGG------------------------------------------------------GTGGACGTGCAAAGCTCTCCTGTGCGGGAGCCCTGGGAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195391 111 + 85365473 GACCGAACAAAAGGAATCGTCTTCA------TTTCACCTTCTGGT----AAGGAGAACAGGCTTTAGCCAAGGAAAGGAGGG------------------------------------------------------GTGGAAGTGCAAAGCCCCCCCATGGGGGAGCCCTGGGCG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042745 105 + 185818997 GACTGAACAAAAGGAATC-TCTTCA------TTTCACCTTCTAGT-AA-G---AGAACAGGCTTCAGCCAAGGGAAGGAGGG-------------------------------------------------------T-GAAGTGCAGAGCCCTCCTG-GCGGGAGCCCTGGAC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33658708 110 + 192294377 GACTGAACAAAAGGAATCGTCTTCA------TTTCACCTTCTAGTAAA-G---AGAACAGGCTTCAGCCAAGGGAAGGAGGG-------------------------------------------------------TGGAAGTGCAGAGCCCTCCTGTGCGGGAGCCCTGGGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4426403 110 - 9440265 GACTGAACAAAAGGAATCGTCTTCA------TTTCACCTTCTAGTAAA-G---AGAACAGGCTTCAGCCAAGGGAAGGAGGG-------------------------------------------------------TGGAAGTGCAGAGCCCTCCCGTGCGGGAGCCCTGGGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016339 110 - 21915920 GACTGAACAAAAGGAATCGTCTTCA------TTTCACCTTCCAGTAAA-G---AGAACAGGCTTCAGCCAAGGGAAGGAGGG-------------------------------------------------------TGGAAGTGCAGAGCCCTCCTGTGCGGGAGCCCTGGGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148556 111 - 21531802 GACTGAACAAAAGGAATCGTCTTCA------TTTCACCCTCTAGTAAAGG---AGAACAGGCTTCAGCCAAGGAAAGGAGGG-------------------------------------------------------TGGAAGTGCAGAGCCCCCCCGTGCAGGAGCCCTGGGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183178 110 - 2515279 GACTGAACAAAAGGAATCGTCTTCA------TTTCACCTTCTAGTAAA-G---AGAACAGGCTTCAGCCAAGGGAAGGAGGG-------------------------------------------------------TGGAAGTGCAGAGCCCTCCTGTGTGGGAGCCCTGGGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340763 109 + 6586416 GACCAAACAAAAGGAATCGTCTTCA------TTTCACCCTCTAGT-AA-G---AGAACAGGCTTCAGCCAAGGAAAGGCGGG-------------------------------------------------------TGGAAGTGCAGAGCCCTCCCGTGCAGGAGCCCTGGGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71418 154 + 138751 GACTGAACAAAAGGAATTGCCTTCA------TTTCACCTTCTGGTAAG-G---AGAACAGGCTTTAGCCAAGGAAAGAAGGGATGGAAGTGGAGACA---------AAGAGCCAGGATTGGTCCAGGAAATGAAGGGT-GGAGTGCAAAGCCCTCCCGGGGGGGA-CCCTGGGAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384557 164 - 2409723 GACTGAACAAAAGCAATCGCCTTCA------TCTCACCTTCTGTTAAG-G---AGAACAGGCTTTAGCCAAGGAAAGAAGGGATGGAAGTGAAGACAAGGCTGGATAAGAGCCGGGTTTGGTCCAGGAAAGGAGGAGTGGGGGTGCAGAGCCCTCCCGTGCAGGG-CTCTGGGAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 545717 164 - 2125214 GACTGAACAAAAGGAATCGCCTTCA------TTTCGCCTTCTGTTAAG-G---AGAACAGGCTTTAGCTAAGGAAAGAAGGGGTGGAAGTGAAGACAAGGCTGGATAAGAGCCGGGACTGGTCCAGGAAAGGAGGAGTGGGGGTGCAAAGCCCTCCCGTGGGGGA-CCCTGGGAC i cebCap1.NW_016107703v1 C 0 I 18 s aotNan1.NW_018514293v1 130728 164 + 376347 GACTGAACAAAAGGAACAGCCTTCA------TTTCACCTTCTGTTAAG-G---AGAACAGGCTTTAGCCAAGGAAAGAAGGGATGGACGTGAAGACGAGGCTGGATAAGAGCCGGGATTGGTCCAGGAAAGGAGGGGTGGGGGAGCAAAGCCCTCCCGTGCGGGA-CCCTGGGAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2274676 139 - 8137123 GACAAAACAAAAGGAATTGATTTTATTCATCTTTTTTTTTCTGATAAA-G---AAAGCAAGGTTTGGCCTAGGAAATTTAGG-------------------------------CAGGTTACTGCCAAGCCAGAGAGGGGAAGGGACAAATCTCTCCTGCACAGGAGCCCAGGAC- i otoGar3.GL873611 I 633 C 0 e canFam3.chr6 61061856 3227 - 77573801 I a score=50090.000000 s hg38.chr7_KI270899v1_alt 174704 9 + 190869 AGAGGAACC s panTro5.chr7_NW_015973580v1_random 49989 9 - 83720 AGAGGAACC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564505 9 + 162613886 AGAGGAACC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136029 9 - 432965 AGAGGAAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195502 9 + 85365473 GGGGGCATC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042850 7 + 185818997 --GGGCACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33658818 9 + 192294377 GGGGGCACC i macFas5.chr3 C 0 T 63592 s macNem1.NW_012019910v1 4426513 9 - 9440265 GGGGGCACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016449 9 - 21915920 GGGGGCACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148667 9 - 21531802 GGGGGCACC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183288 9 - 2515279 GGGGGCACC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340872 9 + 6586416 GGGGGCACC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71572 9 + 138751 CTATGCACT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384721 9 - 2409723 CAGTGCACC i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 130892 9 + 376347 CGGTGCACC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2274815 9 - 8137123 AGTGGCACC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61061856 3227 - 77573801 I e cebCap1.NW_016107703v1 545881 18 - 2125214 I a score=6780.000000 s hg38.chr7_KI270899v1_alt 174713 42 + 190869 ATCCCACAGCCCCCCGGGAGCCGCCGATCCCCCCGACA---CAGC s panTro5.chr7_NW_015973580v1_random 49998 42 - 83720 ATCCCACAGCCCCCCGGAAGCCACCGATCCCCCCGACA---CAGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564514 45 + 162613886 ATCCCACAGCCCCCCGGGAGCCGCCGATCCCCCTGACACAGCAGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136038 42 - 432965 ATCCCACAGCCCCCCGGAAGCCGCCGATCCCCCCGACA---CAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195511 42 + 85365473 ATCCCACAGCCCCCCGGGAGCCACCAATCCCCCCGACA---CAGC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042857 12 + 185818997 -ATCCCCAGCCCC-------------------------------- i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4426522 14 - 9440265 ATCCCCCAGCCCCC------------------------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016458 14 - 21915920 ATCCCCCAGCCCCC------------------------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148676 14 - 21531802 ATCCCCCAGACCCT------------------------------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183297 14 - 2515279 ATCCCCCAGCCCCC------------------------------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340881 14 + 6586416 ATCTCCCAGCCCCC------------------------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71581 9 + 138751 ATCCCATAG------------------------------------ i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384730 9 - 2409723 ATCCCATAG------------------------------------ i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 130901 9 + 376347 ATCCCATGG------------------------------------ i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2274824 17 - 8137123 -ATCCTGGGCCCCTAGGG--------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61061856 3227 - 77573801 I e macFas5.chr3 33658827 63592 + 192294377 T e cebCap1.NW_016107703v1 545881 18 - 2125214 I a score=12441.000000 s hg38.chr7_KI270899v1_alt 174755 5 + 190869 CCCCC s panTro5.chr7_NW_015973580v1_random 50040 5 - 83720 CCCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564559 5 + 162613886 CCCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136080 5 - 432965 CCCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195553 5 + 85365473 CGCCC i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 71590 5 + 138751 CCCCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384739 5 - 2409723 CCCCG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 545899 5 - 2125214 CCCCT i cebCap1.NW_016107703v1 I 18 C 0 s aotNan1.NW_018514293v1 130910 5 + 376347 CCCCT i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 340895 0 + 6586416 C e otoGar3.GL873611 2274841 0 - 8137123 C e canFam3.chr6 61061856 3227 - 77573801 I e chlSab2.chr28 148690 0 - 21531802 C e manLeu1.NW_012101810v1 183311 0 - 2515279 C e cerAty1.NW_012002954v1 17016472 0 - 21915920 C e macNem1.NW_012019910v1 4426536 0 - 9440265 C e macFas5.chr3 33658827 63592 + 192294377 T e rheMac8.chr3 34042869 0 + 185818997 C a score=284613.000000 s hg38.chr7_KI270899v1_alt 174760 37 + 190869 GGG----AGCCGC-------------------------------------------------------------------------------------------CGATCCCC-CCGAGACTGGCCTGCACCTG s panTro5.chr7_NW_015973580v1_random 50045 101 - 83720 AGG----AGCCGCTGATCCCCCCGACACAGCACCCCGGGAGCCGCTGATC------------CCCCCGAGA---------------CAGCCCCCCAGGAGCCGCCGATCCCC-CCGAGACTGGCCTGCACCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564564 129 + 162613886 AGGAGCCCGCCGA---TCCCCCCGACACAGCCCCCCGGGAGCCGCCGATCCCCCGACACACGCCCCCGGGAGCCGCTGACTCCCCCGAGACCCCCAGGAGCCGCTGATCCCC-CCGAGACTGGCCTGCACCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136085 37 - 432965 GGG----AGCCAA-------------------------------------------------------------------------------------------CGATGCCC-CCGAGACTGGCCTGCACCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195558 37 + 85365473 GGG----AGCCGC-------------------------------------------------------------------------------------------TGATCCCC-CCGAGACTGGCCTGCACCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34042869 37 + 185818997 GGG----AGCCGC-------------------------------------------------------------------------------------------CGATTCCC-CCAAGACCGGCCTGCACCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595235 37 + 192294377 GGG----AGCCGC-------------------------------------------------------------------------------------------CGATCCCC-CCGAGACCAGCCTGCACCTG i macFas5.chr3 T 63592 C 0 s macNem1.NW_012019910v1 4426536 37 - 9440265 GGG----AGCCAC-------------------------------------------------------------------------------------------CGATCCCC-CCAAGACCGGCCTGCACCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016472 37 - 21915920 GGG----AGCCAC-------------------------------------------------------------------------------------------CGATCCCC-CCGAGACCGGCCTGCACCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148690 37 - 21531802 GGC----AGCCGC-------------------------------------------------------------------------------------------CGATCCCC-CCGAGACCGGCCTGTACCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183311 37 - 2515279 AGG----AGCCGC-------------------------------------------------------------------------------------------CGATCCCC-CCGAGACCGGCCTGCACCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 340895 37 + 6586416 GGG----AGCCGC-------------------------------------------------------------------------------------------CGATCCCC-CCGAGACCGGCCTGCACCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71595 37 + 138751 GGG----AGCCAT-------------------------------------------------------------------------------------------CAATCTCC-CCTAGACAGGCCTGCACCTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384744 37 - 2409723 GGG----AGTCAC-------------------------------------------------------------------------------------------CGATCTCC-CCTAGACAGGCCTGCACCTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 545904 37 - 2125214 GGG----AGCCAC-------------------------------------------------------------------------------------------CGATCTCC-CCTAGACAGGCCTGCACCTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 130915 37 + 376347 GGG----AGCCAC-------------------------------------------------------------------------------------------CGATCTCC-CCTAGACAGGCCTGCACCTG i aotNan1.NW_018514293v1 C 0 I 17 s otoGar3.GL873611 2274841 33 - 8137123 --G----TGCAGC-------------------------------------------------------------------------------------------CACTTCCT-GGGAGACTGGCCTGCACT-- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065083 38 - 77573801 GGG----GGCAAC-------------------------------------------------------------------------------------------CAATCCCTGTGGAGACTGGCCTATGCCAG i canFam3.chr6 I 3227 C 0 a score=70685.000000 s hg38.chr7_KI270899v1_alt 174797 14 + 190869 ---------CACATCTGGGGGGC s panTro5.chr7_NW_015973580v1_random 50146 14 - 83720 ---------CACATCCGGGGGGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564693 14 + 162613886 ---------CACATCCGGGGGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136122 14 - 432965 ---------CACATCCAGGGGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195595 14 + 85365473 ---------CACATCCGGGGGAC i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 34042906 14 + 185818997 ---------CACATGCTGGGGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595272 14 + 192294377 ---------CACATGTGGGGGGC i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4426573 14 - 9440265 ---------CACATGCAGGGGGC i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 17016509 14 - 21915920 ---------CACATGCGGGGGGC i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 148727 14 - 21531802 ---------CATGTGCGGGGGGC i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 183348 14 - 2515279 ---------CACATGCGGGGGGC i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 340932 14 + 6586416 ---------CACATGTGGGGGAC i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chrUn_GL286444 71632 13 + 138751 ---------AGCATGT-GGGGTT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384781 14 - 2409723 ---------CACATGTGGGGGTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 545941 14 - 2125214 ---------CGCATGTGGGGGTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2274874 6 - 8137123 -----------------GGGAGT i otoGar3.GL873611 C 0 I 11 s canFam3.chr6 61065121 17 - 77573801 GGCTGTGCCCAGATATA------ i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 130952 17 + 376347 I a score=737272.000000 s hg38.chr7_KI270899v1_alt 174811 89 + 190869 GGGGCCCCGAATTG----TCCTGCCACAGTGGCCCCGCCGGCAGGGAGATCAGAGGAAGAAATAAAATCCTCAGGCCTCA-------CCTGGGAT--------CCAGA s panTro5.chr7_NW_015973580v1_random 50160 89 - 83720 GGGGCCCCGAATTG----TTCTGCCACAGTGGCCCCGCCAGCAGGGAGATCCGAGGAAGAAATAAAATCCTCAGGCCTCA-------CCTGGGAT--------CCAGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564707 89 + 162613886 GGGGCCCTGAATTG----TTCTGCCACAGTGGCCCCGCCAGCAGGGAGATCAGAGGAAGAAATAAAATCCTCAGGCCTCA-------CCTGGGAT--------CCAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136136 89 - 432965 GGGGCCCCGAATTG----TTCTGCCACAGTGGCCCTGCCCGCAGGGAGATCAGAGGAAGAAATAAAATCCTCAGGCCTCA-------CCTGGGAT--------CCAGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195610 89 + 85365473 GGGGCCCCGAATTG----TTCTGCCACAGTGGCCCGGCCAGCAGGGAGATCAGAGGAAGAAATAAAATCCTCAGGCCTCA-------CCTGGGAT--------CCAGA i nomLeu3.chr20 I 1 C 0 s rheMac8.chr3 34042920 84 + 185818997 GGGGCCTGGAATTG----TTCTGCCACAGTGGCCCGGCCGGCAGGGAGATCAGAGGAAGAAATAAAATCCTCAGACCTCA-------CCGGGGGT------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33595287 89 + 192294377 GGGGCCCGGAATTG----TTCTGCCACAGTGGCCCGGCCGGCAGGGAGATCAGAGAAAGAAATAAAATCCTCAGACCTCA-------TCTGGGGTCCCGA-------- i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4426588 84 - 9440265 GGGGCCTGGAATTG----TTCTGCCACAGTGGCCCGGCCGGCAGGGAGATCAGAGGAAGAAATAAAATCCTCAGACCTCA-------CCGGGGGT------------- i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 17016524 84 - 21915920 GGGGCCCGAAATTG----TTCTGCCACAGTGGCCCGGCCGGCAGGGAGATCAGAGGAAGAAATAAAATCCTCAGACCTCA-------CCGGGGAT------------- i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 148742 87 - 21531802 GGGGCCCGGAATCG----TTCTGCCACAGTGGCCCGGCCGGCAGGGAGATCAGAAGAAGAAATAAAATCCGCAGGCCTCA-------TCGGGGGT-----CCA----- i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 183363 87 - 2515279 GGGGCCCGGAATTG----TTCTGCCACAGTGGCCCAGCCGGCAGGGAGATCAGAGAAAGAAATAAAATCCTCAGACCTCA-------CCGGGGGT-----CCT----- i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 340947 84 + 6586416 GCGGCCCGGAATTG----TTCTGCCACAGTGGCCTGGCCGGCAGGGAGATCAGAGGAAGAAATAAAGTCCTCAGGCCTCA-------CCGGGGGT------------- i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chrUn_GL286444 71645 87 + 138751 GGGGGCCCCCATTG----TTCTGCCACAGTGGTCC-ACCAGCC-GGAGATCAGAGGAAGAAATAACATCCTCAGGCCTCA-------CATGGGAT--------CCAGA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384795 88 - 2409723 GGGGGCCCCCACTG----TTCTGCCACAGTGACCCGGCCAGCC-GGAGATCAGAGGAAGAAATAACATCCTCAGGCCTCA-------CATGGGAT--------CCAGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 545955 88 - 2125214 GGGGGCCCCCATTG----TTCTGCCACAGTGGTCCAGCCAGCC-GGAGATCAGAGGAAGAAATAACATCCTCAGGCCTCA-------CATGGGAT--------CCAGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 130969 87 + 376347 -GGGGCCCCGATTG----TTCTGCCACAGTGGCCCGGCCTGCC-GGAGATCAGAGGAAGAAATAACATCCTCTGGCCTCA-------CATGGGAT--------CCAGA i aotNan1.NW_018514293v1 I 17 C 0 s otoGar3.GL873611 2274891 89 - 8137123 GGTACCAGCCATTG---CTCCTGCCACCGATAGTTGGCCAGCAGGAACATTAATGTCAGAACTGAAG-CCAGAGGGACCA-------CACAGGGT--------CCTAC i otoGar3.GL873611 I 11 C 0 s canFam3.chr6 61065138 92 - 77573801 -GGGGCACCAACAGCTGCCTTTGCTGCTGTGACTTGACTGGCA-GGAAAACAGAGTGGGAAATGAA--CCTCAG---TCAGTGTGGTCCAGGGAC--------CTCG- i canFam3.chr6 C 0 C 0 a score=25763.000000 s hg38.chr7_KI270899v1_alt 174900 12 + 190869 TTCGAGGCCGGA s panTro5.chr7_NW_015973580v1_random 50249 12 - 83720 TTCGAGGCCGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564796 12 + 162613886 TTCGAGGCCGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136225 12 - 432965 TTCGAGGCTGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195699 12 + 85365473 TTCAAGGCCCAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34043004 5 + 185818997 -------CCCGA i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4426672 5 - 9440265 -------CCCGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016608 5 - 21915920 -------CCCGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148829 2 - 21531802 ----------GA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183450 2 - 2515279 ----------GA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341031 5 + 6586416 -------CCCGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71732 12 + 138751 TTCAAGGCCCAA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384883 12 - 2409723 TTCCAGGCCGGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546043 12 - 2125214 TTCAAGGCCCGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131056 12 + 376347 TTCAAGGCTGGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2274980 10 - 8137123 -TCCAGACAAG- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065230 11 - 77573801 -TCAAGGCCAGG i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595376 0 + 192294377 C a score=332033.000000 s hg38.chr7_KI270899v1_alt 174912 33 + 190869 AGAGCAGACTTTG-CCGGGGG-CACTCACGCAGAT s panTro5.chr7_NW_015973580v1_random 50261 33 - 83720 AGAGCAGACTTTG-CCGGGGG-CACTCACGCAGAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564808 33 + 162613886 AGAGCAGACTTTG-CCGGGGG-CACTCACGCAGAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136237 34 - 432965 AGAGCAGACTTTGCCCGGGGG-CACTCACGCAGAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195711 33 + 85365473 AGAGCAGACTTTG-CCCGGGG-CACTCACGCAGAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34043009 32 + 185818997 AGAGCAG-CTTTG-CCCGGGG-CCCTCACGCAGAT i rheMac8.chr3 C 0 I 25 s macFas5.chr3 33595376 33 + 192294377 AGAGCAGCCTTTG-CCCGGGG-CCCTCACGCAGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4426677 33 - 9440265 AGAGCAGCCTTTG-CCCGGGG-CCCTCACGCAGAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016613 33 - 21915920 AGAACAGCCTTTG-CCCGGGG-CCCTCACGCAGAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 148831 33 - 21531802 AGAGCAGCCTTTG-CCCGGGG-CCCTCACGCAGAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183452 33 - 2515279 AGAGCAGCCTTTG-CCCGGGG-CCCTCACGCAGAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341036 33 + 6586416 AGAGCAGCCTTTG-CCCGGGG-CCCTCACGCAGAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 71744 33 + 138751 AGAGCAGACTTTG-CCTGGAG-CACTCACGTGGGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384895 28 - 2409723 AGAGCAGACTTTG-CCCGGGG-CACTCACG----- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546055 33 - 2125214 AGAGCAGGCTATG-CCTGGGG-CACTCATGCAGGT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131068 33 + 376347 AGAGCGGACTTTG-CCCGGGG-CACTCACACAGGT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2274990 34 - 8137123 AGAGCAGACTTAG-CCCAGGGCCACTGACCCAGGT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065241 33 - 77573801 CCTGCAGGCTGTG-CCCGCTG-TACCCGCGCAGGT i canFam3.chr6 C 0 C 0 a score=154183.000000 s hg38.chr7_KI270899v1_alt 174945 24 + 190869 -CCCCACGT-CT-CAGGGCAC---CGCAGT--- s panTro5.chr7_NW_015973580v1_random 50294 24 - 83720 -CCCCACGT-CT-CAGGGCAC---CGCAGT--- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564841 24 + 162613886 -CCCCACGT-CT-CAGGGCAC---CGCAGT--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136271 24 - 432965 -CCCCACGT-CT-CAGGGCAC---CGCAGT--- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195744 24 + 85365473 -CCCCGCGT-GT-CAGGGCAC---TGCAGT--- i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33595409 24 + 192294377 -CCCCGCGT-CG-CAGGGCAC---CGCAGT--- i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4426710 24 - 9440265 -CCCCGCGT-CG-CAGGGCAT---CGCGGT--- i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 17016646 24 - 21915920 -CCCCGCGT-CG-CAGGGCAT---CGCGGT--- i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 148864 24 - 21531802 -CCCCGCGT-CG-CAGGGCAC---CGCAGT--- i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 183485 25 - 2515279 -CCCCGCGTCCA-CAGGGCAT---CGCGGT--- i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 341069 24 + 6586416 -CCCCACGT-CG-CAGGGCAC---CGCGGT--- i colAng1.NW_012117710v1 C 0 I 1 s calJac3.chrUn_GL286444 71777 23 + 138751 -CCCCACAG-CT-CA-GACAT---CGCAGC--- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384923 20 - 2409723 ----CACAG-CT-CA-GACAT---CGCAGC--- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546088 23 - 2125214 -CCCCACGG-CT-CA-GGCAT---CACAGC--- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131101 23 + 376347 -CCCCACGG-CT-CA-GGCAC---CGCAGC--- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2275024 28 - 8137123 -GCCCACAT-CTGCAGGGCATCTACACAGT--- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065274 28 - 77573801 GCCCAAGGC-CA-CAGGGCAT---CGCCACGGC i canFam3.chr6 C 0 C 0 e rheMac8.chr3 34043041 25 + 185818997 I a score=2533269.000000 s hg38.chr7_KI270899v1_alt 174969 215 + 190869 CCTATTACCATAAGCGATCATGCAAAGGTGTG-GTAAAAGCCATCTGTCATTCAT-AAAATGTGATGATGCCTTTCTGCAAAGACATAAGCCA-TCCCGGGGCTCAGCCAAGAAATGG-CCAT-AAAATCCGGCATAATGACCTCAAAGCACACTTTCCAATATAAAGAACTTTCTAGGCAGCTGTTTCCAGA--ATTTATCTGTGTGCAATAATTTTACAC s panTro5.chr7_NW_015973580v1_random 50318 215 - 83720 CCTATTACCATAAGTGATCATGCAAAGGTGTG-ATAAAAGCCATCTGTCATTCAT-AAAATGTGATGATGCCTTTCTGCAAAGACATAAGCCA-TCCCGGGGCTCAGCCAAGAAATGG-CCAT-AAAATCCGGCATAATGACCTCAAAGCACACTTTCCAATATAAAAAACTTTATAGGCAGCTGTTTCCAGA--ATTTATCTGTGTGCAATAATTTTACAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 564865 215 + 162613886 CCTATTACCATAAGCGATCATGCAAAGGTGTG-ATAAAAGCCATCTGTCATTCAT-AAAATGTGATGATGCCTTTCTGCAAAGACATAAGCCA-TCCCGGGGCTCAGCCAAGAAATGG-CCAT-AAAATCCGGCATAATGACCTCAAAGCACACTTTCCAATATAAAGAACTTTATAGGCAGCTGTTTCCAGA--ATTTATCTGTGTGCAATAATTTTACAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136295 215 - 432965 CCTATTACCATAAGCGATCATGCAAAGGTGTG-ATAAAAGCCATCTGTCATTCAT-AAAATGTGATGATGCCTTTCTGCAAAGACATAAGCCA-TCCCGGGGCTCAGCCAAGAAATGG-CCAT-AAAATCCAGCATAATGACCTCAAAGCACACTTTCCAATATAAAGAACTTTCTAGGCAGCTGCTTCCAGA--ATTTATCTGTGTGCAATAATTTTACAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195768 215 + 85365473 CCTATTACCATAAGCGATAATGCAAAGGTGTG-ATAAAAGCCATCTGTCATTCAT-AAAATGTGATGATGCCTTTCTGCAAAGCCATAAGCCA-TGCCGGGGCTCAGCCAAGAAATGG-CTAT-AAAATCCGGCATAAAGACCTCAAAGCACACTTTCCAATATAAAGAATTTTCTAGGCAGCTGTTTCCAGA--ATTTATCTGTGTGCAATAATTTTACAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34043066 214 + 185818997 CCTGTTACCATAAGCGATAATGCAGAAGTGTATGAAAAAACCGTCTGTCGTTCAT-AAAATGTGATGATGCCCTTCTGCAAAGCCCTAAGCCAGGCCCGGGGCTCAGCC-AGAAACGG-CTGTAAAAATCTGGCGTCATGGCCTCAAAGCATACTTTCCAATATAAAGAATTTTCTAG--CGCTG-TTCCAGA--ATTTATCTGTGTGCAATAATTGTACAC i rheMac8.chr3 I 25 C 0 s macFas5.chr3 33595434 213 + 192294377 CCTATTACCATAAGCGATAATGCAGAAGTGTG-ATAAAAGCCATCTGTCATTCAT-AAAATGTGATGATGCCCTTCTGCAAAGCCATAAGCCA-GCCCGGGGCTCAGCCAAGAAACGG-CTGT-AAAATCCAGCGTCATGGCCTCAAAGCCCAGTTTCCAATATAAAGGTTATTCCAAGCAGCTGTTTCCTGA----TTATTTACGTGCAATAATTTTATAC i macFas5.chr3 I 1 I 70765 s macNem1.NW_012019910v1 4426735 215 - 9440265 CCTGTTACCATAAGCGATAATGCAGAAGTGTG-ATAAAAACCGTCTGTCGTTCAT-AAAATGTGATGATGCCTTTCTGCAAAGCCATAAGCCA-GCCCGGGGCTCAGCCAAGAAACGG-CTGT-AAAATCCGGCGTCATGGCCTCAAAGCATACTTTCCAATATAAAGAATTTTCTAGGCAGCTGTTTCCAGA--ATTTATCTGTGTGCAATAATTGTACAC i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 17016671 215 - 21915920 CCTGTTACCATAAGCGATAATGCAGAAGTGTG-ATAAAAACCGTCTGTCGTTCAT-AAAATGTGATGATGCCTTTCTGCAAAGCCATGAGCCA-GCCCGGGGCTCAGCCAAGAAACGG-CTGT-AAAATCCGGCGTCATGGCCTTAAAGCATACTTTCCAATATAAAGAATTTTCTAGGCAGCTGTTTCCAGA--ATTTATCTGTGTGCAATAATTGTACAC i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 148889 215 - 21531802 CCTGTTACCATAAGCGATAATGCAGAAGTGTG-ATAAAAGCCGTCTGTCGTTCAT-AAAATGTGACGATGCCTTTCTGCAAAGCCATAAGCCA-GCCCGGGGCTCAGCCAGGAAACGG-CTGT-AAAATCCGGCATcgtgacctcagagcacagtttccaatataaagaattttctaggcagctgtttccaga--atttATCTGTGTGCGATAATTGTACAC i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 183511 215 - 2515279 CCTGTTACCATAAGTGATAATGCAGAAGTGTG-ATAAAAACCGTCTGTCGTTCAT-AAAATGTGATGATGCCTTTCTGCAAAGCCATAAGCCA-GCCCGGGGCTCAGCCAAGAAACGG-CTGT-AAAATCTGGCGTCATGGCCTCAAAGCATACTTTCCAATATAAAGAATTTTCTAGGCAGCTGTTTCCAGA--ATTTATCTGTGTGCAATAATTGTACAC i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 341094 215 + 6586416 CCTATTACCATAAGCGATAATGCAGAAGTGTG-ATAAAAGCCGTCTGTCGTTCAT-AAAATGTGATGATGCCTTTTTGCAAAGCCATAAGCCA-GCCCGGGGCTCAGCCGAGAAACGG-CTGT-AAAATCCGGCGTCATGGCCTCAAAGCACAATTCCCAATATAAAGAATTTTCTAGGCAGTTGCTTCCAGA--ATTTATCTGTGTGCAATAATTGTACAC i colAng1.NW_012117710v1 I 1 C 0 s calJac3.chrUn_GL286444 71800 215 + 138751 CCTAGTACCATAAGCGATCATGCAAAGGTGTG-ATAAGAGCCATCTGTCATTCAT-AAAATGTGATGATGCCTTTCTGCAAAGCCATAAGCCA-TCCTGAAGCTCAGCCAAGAAATGG-CTAT-AAAATCCTGCATAATGGCCTCAAAGCACACTTTCCAATATAAAGAATTTTCTAGGCAGCTGTTTCCAGA--ATTTATCTGTGTGCAATAATTTTACAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 384943 215 - 2409723 CCTATTACCATAAGCGATCATGCAAAGGTGTG-ATAAAAGCCATCTGTCATTCAT-AAAATGTGATGATGCCTTTTTGCAGAGCTGTAAGCCA-TCCTGGAGCTCAGCCAAGAAATGG-CTAT-AAAATCCTGCCTAATGACCTCAAAGCACACTTTCCAATATAAAGAATTTTCTAGGCAGCTGTTTCCAGA--ATTTATCTGCGTGCAATAACTTTACAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546111 215 - 2125214 ACTATTACCATAAGCGATCATGCAAAGGTGTG-ATAAAAGCCATCTGTCATTCAT-AAAATGTGATGATGCCTTTCTGCAAAGCCATAAGCCA-TCCTGGAGCTCAGCCAAGAAATGG-CTAT-AAAATCCTTCATAATGACCTCAAAGCATACTTTCCAATATAAAGAATTTTCTAGGCAGCTGTTTCCAGA--ATTTATCTGTGTGCAATAATTTTACAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131124 217 + 376347 CCTATTACCGTAAGTGATCGTGCAAAGGTGTG-ATAAAAGCCATCTGTCATTCAT-AAAATGTGATGATGCCTTTCTGCAAAGCCGTCAGCCA-TCCTGGGGCTCAGCCAAGGAATGG-CTAT-AAAATCCTGCATAATGACCTCAAAGCACACTTTCCAATATAAAGGTTATTCTAGGCAGCTGTTTCCAGATTATTTATCTGTGTGCAATAATTTTACAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2275052 215 - 8137123 TCTATTAACATACATGATAATGCAAAGGTGTG-ACAAAAGCCATCTGTCACTCAC-GAAATGCAATGTCGCCTTTCTGCGAAGCCATAAGCCA-CACTGGGGCTTAGCTGAGAACTGG-CCAT-AAAATCCTGCATAATGACCTCAAAGCAGACTTTCCAATATAAAGAATCTTCTAAGCAGCTGTTTCCAGG--ATTTATGTCTGTGCAATAATCTCATAC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065302 217 - 77573801 CCTATTACCATAAGCAATAATGCAGAGGTGTG-ATAAAAGCCATCTGTCATTCATAAAAAGGCGACGTCGCCTTTTTGCAAAGCCATAAGCCA-TCTTGGGGCTCAGCCAAGAAATGGCCCAT-AAAATCCTGAGTAACGGCCTCAAAGCATACTTTTCAATATAAAGAATATTCTAGGCAGCTGTTTCTAGA--ACTTATCTGTGTGCAGTAATTTTATAC i canFam3.chr6 C 0 C 0 a score=586588.000000 s hg38.chr7_KI270899v1_alt 175184 76 + 190869 -CTAAAACTATCACTGTGTTCTGTGTCTGGTG-GCCTCTTTAGCAGTTCCTCCCCTG-TAACAGCAAGAAAGT-----------------------------------------------------------------------------GCCTTC s panTro5.chr7_NW_015973580v1_random 50533 76 - 83720 -CTAAAACTATCACTGTGTTCTGTGTCTGGTG-GCCTCTTTAGCAGTTCCTCCCCTG-TAACAGCAAGAAAGT-----------------------------------------------------------------------------GCCTTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565080 76 + 162613886 -CTAAAACTATCACTGTGTTCTGTGTCTGGTG-GCCTCTTTAGCAGTTCCTCCCCTG-TAACAGCAAGAAAGT-----------------------------------------------------------------------------GCCTTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136510 76 - 432965 -CTAAAACTATCACTGTGTTCTGTGTCTGGTG-GCCTCTTTACCAGTTCCTCCCCTG-TAACAGCAAGAAAGT-----------------------------------------------------------------------------GCCTTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 195983 153 + 85365473 -CTAAAACTATCACTGTGTTCCATGTCTGGTG-GCCTCTTTAGCAGTTCCTCCCCTG-TAAGAGCAAGAAAGTGCCTTCAACATGCTGAGGGGCTCTGGGTGACAAGAGACAGTATCAGGTTCGCCTGCCAATGGCTTTGCTGAGAAAACGCCTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34043280 76 + 185818997 -CTAAAACTATGGCTGTGTTCCACGTCTGGTG-GTCTCTTTAGCAGTTCCTCCCCTG-TGACGGCGAGAAAGC-----------------------------------------------------------------------------GCCTTC i rheMac8.chr3 C 0 I 11 s macNem1.NW_012019910v1 4426950 76 - 9440265 -CTAAAACTATGGCTGTGTTCCACGTCTGGTG-GTCTCTTTAGCAGTTCCTCCCCTG-TGACGGCGAGAAAGT-----------------------------------------------------------------------------GCCTTC i macNem1.NW_012019910v1 C 0 I 3 s cerAty1.NW_012002954v1 17016886 76 - 21915920 -CTAAAACTATGGCTGTGTTCCACGTCTGGTG-GTCTCTTTAGCAGTTTCTCCCCTG-TGACGGCGAGAAAGC-----------------------------------------------------------------------------GCCTTC i cerAty1.NW_012002954v1 C 0 I 3 s chlSab2.chr28 149104 75 - 21531802 -CCAAACCTATCGCCGTGTTCCGCGTCTGGTG-GCCTCTTTAGCAGTTCCTCCCCTG-TGACGGCGAGAAAG------------------------------------------------------------------------------GCCTTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183726 76 - 2515279 -CTAAAACTATGGCTGTGTTCCACGTCTGGTG-GTCTCTTTAGCAGTTCCTCCCCTG-TGACGGCGAGAAAGC-----------------------------------------------------------------------------GCCTTC i manLeu1.NW_012101810v1 C 0 I 3 s colAng1.NW_012117710v1 341309 75 + 6586416 -CTAAAACTATCACCGTGTTCCGCGTCTGGTG-GCCTCTTTAGCAGTTCCTCCCCTG-TGACAGCGAGAAAGC-----------------------------------------------------------------------------GCCTT- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72015 76 + 138751 -CTAAAACTATCACTGCGTTTGGTGTCTGATG-GCCTCCTTAGCTGTCCCTCCCCTG-TAACAGCAAGAAAGT-----------------------------------------------------------------------------GGCTTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385158 76 - 2409723 -CTAAAACTATCACTGCGTTTGGTGTCTGACA-GTCTCCTTAGCCATCCCTCCCCTG-TAACAGCAAGAAAGC-----------------------------------------------------------------------------GCCTTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546326 76 - 2125214 -CTAAAACTATCACTGCATTTGGTGTCTGATG-GCCTCCTTAGCCATCCCTCCCCTG-TAACAGCAAGAAAGC-----------------------------------------------------------------------------ACCTTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131341 76 + 376347 -CCAAAGCTATCAGTGCGTTTGGTGTCTGATG-GCCTCCTTAGCCGTCCCTCCCCTG-TAACAGTGAGAAAGC-----------------------------------------------------------------------------GCCTGC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2275267 64 - 8137123 -CCCAAACTATTACCTTGTCC--------------CTCTGTAGCATTCCCTCCCCCACCGACAGTGCGGAAGT-----------------------------------------------------------------------------GTCTCT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065519 75 - 77573801 CCAAAAAGGATTACCG-GCTCAGTGTCTGATGTACCCCTTCAGCAA--CCCCCTCAT-AGGCAGCAGTAAAGT-----------------------------------------------------------------------------GTCTAG i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I a score=57707.000000 s hg38.chr7_KI270899v1_alt 175260 21 + 190869 AACATGCTGATGGGCCCCGGG s panTro5.chr7_NW_015973580v1_random 50609 15 - 83720 AACATGCTGATGGGC------ i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565156 21 + 162613886 AACATGCTGGTGGGCCCTGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136586 21 - 432965 AACATGCTGATGGGCCCCGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196136 21 + 85365473 AACATGCTGATGGGCCCTGGG i nomLeu3.chr20 C 0 C 0 s chlSab2.chr28 149179 11 - 21531802 GACATGCGGAT---------- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 341384 4 + 6586416 ----TGCC------------- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72091 21 + 138751 AACATGCTGATGGCCTCTGGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385234 21 - 2409723 AACACGCTGATGGCCTCTGGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546402 21 - 2125214 AACATGCTGATGGCCTCTGGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131417 21 + 376347 AACATGCCGATGGCCTCTGGG i aotNan1.NW_018514293v1 C 0 I 20 s otoGar3.GL873611 2275331 21 - 8137123 GACATGCTGATCAGTTCTGGG i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61065594 21 - 77573801 AACGTGTTTGATGGTCCTGTG i canFam3.chr6 C 0 C 0 e manLeu1.NW_012101810v1 183802 3 - 2515279 I e cerAty1.NW_012002954v1 17016962 3 - 21915920 I e macNem1.NW_012019910v1 4427026 3 - 9440265 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043356 11 + 185818997 I a score=-2593.000000 s hg38.chr7_KI270899v1_alt 175281 1 + 190869 -T s panPan2.chr7 565177 1 + 162613886 -T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136607 1 - 432965 -T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196157 1 + 85365473 -T i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 72112 1 + 138751 -T i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385255 1 - 2409723 -A i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546423 1 - 2125214 -T i cebCap1.NW_016107703v1 C 0 I 9 s canFam3.chr6 61065615 1 - 77573801 A- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 341388 0 + 6586416 C e otoGar3.GL873611 2275352 1 - 8137123 I e chlSab2.chr28 149190 0 - 21531802 C e manLeu1.NW_012101810v1 183802 3 - 2515279 I e cerAty1.NW_012002954v1 17016962 3 - 21915920 I e macNem1.NW_012019910v1 4427026 3 - 9440265 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043356 11 + 185818997 I e aotNan1.NW_018514293v1 131438 20 + 376347 I e panTro5.chr7_NW_015973580v1_random 50624 0 - 83720 C a score=-9749.000000 s hg38.chr7_KI270899v1_alt 175282 4 + 190869 -CAAC s panPan2.chr7 565178 4 + 162613886 -CAAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136608 4 - 432965 -CAAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196158 4 + 85365473 -CAAC i nomLeu3.chr20 C 0 C 0 s calJac3.chrUn_GL286444 72113 2 + 138751 --GA- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385256 2 - 2409723 --GA- i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2275353 1 - 8137123 ----C i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61065616 4 - 77573801 GCAC- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 341388 0 + 6586416 C e chlSab2.chr28 149190 0 - 21531802 C e manLeu1.NW_012101810v1 183802 3 - 2515279 I e cerAty1.NW_012002954v1 17016962 3 - 21915920 I e macNem1.NW_012019910v1 4427026 3 - 9440265 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043356 11 + 185818997 I e aotNan1.NW_018514293v1 131438 20 + 376347 I e cebCap1.NW_016107703v1 546424 9 - 2125214 I e panTro5.chr7_NW_015973580v1_random 50624 0 - 83720 C a score=5180.000000 s hg38.chr7_KI270899v1_alt 175286 8 + 190869 ---ATGCTGAT s panPan2.chr7 565182 8 + 162613886 ---ATGCTGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136612 8 - 432965 ---ATGCTGAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196162 8 + 85365473 ---GTGCTGAT i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427029 8 - 9440265 ---ATGCGGAT i macNem1.NW_012019910v1 I 3 C 0 s cerAty1.NW_012002954v1 17016965 8 - 21915920 ---ATGCGGAT i cerAty1.NW_012002954v1 I 3 C 0 s manLeu1.NW_012101810v1 183805 8 - 2515279 ---ATGCGGAT i manLeu1.NW_012101810v1 I 3 C 0 s colAng1.NW_012117710v1 341388 8 + 6586416 ---GTGCGGAT i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2275354 4 - 8137123 ----TTCT--- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065620 8 - 77573801 AGGATCCT--- i canFam3.chr6 C 0 C 0 e chlSab2.chr28 149190 0 - 21531802 C e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043356 11 + 185818997 I e aotNan1.NW_018514293v1 131438 20 + 376347 I e saiBol1.JH378296 385258 0 - 2409723 C e cebCap1.NW_016107703v1 546424 9 - 2125214 I e calJac3.chrUn_GL286444 72115 0 + 138751 C e panTro5.chr7_NW_015973580v1_random 50624 0 - 83720 C a score=59590.000000 s hg38.chr7_KI270899v1_alt 175294 12 + 190869 GGGCTCCGGGTG s panTro5.chr7_NW_015973580v1_random 50624 8 - 83720 ----TCCGGGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565190 12 + 162613886 GGGCTCCGGGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136620 12 - 432965 GGGCTCCGGGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196170 12 + 85365473 GGGCTCTGGGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34043367 12 + 185818997 GGGCTCCCGGTG i rheMac8.chr3 I 11 C 0 s macNem1.NW_012019910v1 4427037 12 - 9440265 GGGCTCCGGGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016973 12 - 21915920 GGGCTCCGGGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 149190 4 - 21531802 --------GGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183813 12 - 2515279 GGGCTCCGGGTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341396 12 + 6586416 GGGCTCCGGGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72115 6 + 138751 ------CGAGTG i calJac3.chrUn_GL286444 C 0 I 2 s saiBol1.JH378296 385258 6 - 2409723 ------CGAGTG i saiBol1.JH378296 C 0 I 2 s otoGar3.GL873611 2275358 9 - 8137123 ---CTTTGAGTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065628 12 - 77573801 GCCCCCTGGGTG i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 131438 20 + 376347 I e cebCap1.NW_016107703v1 546424 9 - 2125214 I a score=54629.000000 s hg38.chr7_KI270899v1_alt 175306 9 + 190869 ACCAGTGAC s panTro5.chr7_NW_015973580v1_random 50632 9 - 83720 ACCAGTGAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565202 9 + 162613886 ACCAGTGAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136632 9 - 432965 ACAAGTGAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196182 9 + 85365473 ACAAGTGAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34043379 9 + 185818997 ACGAGTGAC i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4427049 9 - 9440265 ACGAGTGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016985 9 - 21915920 ACGAGTGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 149194 9 - 21531802 ACCAGTGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183825 9 - 2515279 ATGAGTGAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341408 9 + 6586416 ATGAGTGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72123 8 + 138751 -ACAATAGC i calJac3.chrUn_GL286444 I 2 I 1 s saiBol1.JH378296 385266 8 - 2409723 -ACAGTAGC i saiBol1.JH378296 I 2 I 1 s cebCap1.NW_016107703v1 546433 8 - 2125214 -ATAATAGC i cebCap1.NW_016107703v1 I 9 I 1 s otoGar3.GL873611 2275367 9 - 8137123 ACAAGTGGC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065640 9 - 77573801 ACAAGTGGC i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 131438 20 + 376347 I a score=1233888.000000 s hg38.chr7_KI270899v1_alt 175315 179 + 190869 AGCATCAGGTTCGCTTGACAATGGCTTTG------------------------------------------------CCGTCGGACACA----GG-C-----------------------GCAGGTGCCTGGGGAGGTGCCGTCTGTCTTTGTGAT-CCCCCAGGTTGCCA-GGAAGGAGGAGCTCATGCC--------TCT--------------GTT-------------GAGAAGAGCAGGTTTTGTCTTGGTTG------------GACTCAGAGACCCTGAGAGCAGGATTTTCCCTCC- s panTro5.chr7_NW_015973580v1_random 50641 179 - 83720 AGCATCAGGGTCGCTTGACAATGGCTTTG------------------------------------------------CCATCGGACACA----AG-C-----------------------GCAGGTGCCTGGGGAGGTGCCGTCTGTCTTTCTGAT-CCCCCAGGTTGCCA-GGAAGGAGGAGCTCATGCC--------TCT--------------GTT-------------GAGAAGAGCAGGCTTTGTCTTGGTTG------------GACTCAGAGACCCTGAGAGCAGGATTTTCCCTCC- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565211 179 + 162613886 AGCATCAGGTTCGCTTGACAATGGCTTTG------------------------------------------------CCATCGGACACA----AG-C-----------------------GCAGGTGCCTGGGGAGGTGCCGCCTGTCTTTGTGAT-CCCCCAGGTTGCCA-GGAAAGAGGAGCTCATGCC--------TCT--------------GTT-------------GAGAAGAGCAGGCTTTGTCTTGGTTG------------GACTCAGAGACCCTGAGAGCAGGATTTTGCCTCC- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136641 179 - 432965 AGCATCAGGTTCGCTTGACAATGGCTTTG------------------------------------------------CCATCGGACACA----AG-C-----------------------GCAGGTGCCTGGGGAGGTGCCGTCTGTCTTTGTGAT-CCCCCAGGTTGCCA-GGGAGGAGGAGCTCAGGCC--------TCT--------------GTT-------------GAGAAGAGCAGGTTTTGTCTTGGTTG------------GACTCAGAGACTCTGAGAGCAGGATTTTCCCTCC- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196191 178 + 85365473 AGCATCAGGCTCGCCTGCCAATGGCTTTG------------------------------------------------CCATCGGACACA----AG-C-----------------------ACAGGTGCCTGGGGAGGTGTCGTCTGTCCTTGTGAT-CCCCCAGGTTGCCA-GGAAGGAGGAGCTCATGCC--------TCT---------------TT-------------GAGAAGCGCAGGTTTCGTCTTGGTTG------------GACTCAGAGGCCCTGAGAGCAGGAATTACCCTCC- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34043388 179 + 185818997 CGCCTCGGGTTTGCTTGCTAATGACTTTG------------------------------------------------CCATCGGACATG----AGCC-----------------------ACAGGTGCCT-GGGAGGTGCCGTCTG-CTTTGTGATCCCCCCAGGTTGCCAGGGAAGGAGGAACTCATGCC--------TCT--------------GTT-------------GAGAAGAGGCAGTTTTGTCTTGATT-------------GACTCAGAGGCCCTGAGAGCAGGAATTCCCCTCC- i rheMac8.chr3 C 0 I 225 s macNem1.NW_012019910v1 4427058 179 - 9440265 TGCCTCGGGTTCGCTTGCTAATGACTTTG------------------------------------------------CCATCGGACATG----AG-C-----------------------ACAGGTGCCTGGGGAGGTGCCGTCTGTCTTTGTGAT-CCCCCAGGTTGCCA-GGAAGGAGGAACTCATGCC--------TCT--------------GTT-------------GAGAAGAGCAGGTTTTGTCTTGATTG------------GACTCAGAGGCCCTGAGAGCAGGAATTCCCCTCC- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17016994 179 - 21915920 CGCCTCGGGTTCGGTTGCTAATGACTTTG------------------------------------------------CCATCGGACATG----AG-C-----------------------ACAGATGCCTGGGGAGGTGCCGTCTGTCTTTGTGAT-CCCCCAGGTTGCCA-GGAAGGAGGAACTCATGCC--------TCT--------------GTT-------------GAGAAGAGCAGGTTTTGTCTTGGTTG------------GACTCAGAGGCCCTGACAGCAGGAATTCCCCTCC- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 149203 179 - 21531802 CGCTTCGGGTTCGCTTGCTAATGACTTTG------------------------------------------------CCATCGGACACG----AG-C-----------------------ACAGGTGCCTGGGGAGGTGCCGTCTGTCTTTGTGAT-CCCCCAGATTGCCA-GGAAGGAGGAGCTCATGCC--------TCC--------------GTT-------------GAGAAGAGCAGGTTTTGTCTTGGTTG------------GACTCAGAGGCCCTGACAGCAGGAATTTTCCTCC- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 183834 179 - 2515279 CGCCTCAGGTTCGCTTGCTAATGACTTTG------------------------------------------------CCATCGGACATG----AG-C-----------------------ACAGGTGCCTGGGGAGGTGCCGTCTGTCTTTGTGAT-CCCCCAGGTTGCCA-GGAAGGAGGAACTCATGCC--------TCT--------------GTT-------------GAGAAGAGCAGGTTTTGTCTTGGTTG------------GACTCAGAGGCCCTGAGAGCAGGAATTCCCCTCC- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341417 179 + 6586416 TGCTTTGGGGTCGCTTGCTAATGACTCTG------------------------------------------------CCATCGGACACG----AG-C-----------------------ACAGGTGCCTGGGGAGGTGCCGTCTGTCTCTGTGAT-CCCCCAGGTTGCCA-GGAAGGAGGAGCTCATGCC--------TCT--------------GTT-------------GAGAAGGGCAGGTTTTGTCTTGGTTG------------GACTCAGAGGCCCTGAGAGCAGGAATTGCCCCCC- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72132 96 + 138751 AGCATCATGTTCTCTTGCTAATGGCTTCA------------------------------------------------CCATCAGACAC---------------------------------CAG--ACCTTGG-----------------------------------------------------------------------------------------------------------------TTGTCTTGGTTG------------AACTCAGAGGCCCTGAAGGCAGGTATTCCCCTCG- i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 385275 163 - 2409723 AGCATCGTGTTCGCAGG-------------------------------------------------------------CATCAGACACA----AG-C-----------------------ACAA--GTCTGGGGAGGTGCTGCCAATTTTTGTGAT-CTCCCAGGTTGCCA-GGAA-GAGGAGCTCATCCT--------TGT--------------GCT-------------GAGAAGAGCAGGTTTTGTCTTGGTTG------------AACTCAGAGGCCCTGAGGGCAGGCATTCCCCTCA- i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 546442 187 - 2125214 AGCATCATGTTCACTTGCTAATGGCTTCG------------------------------------------------CCATCAGACACA----AG-C-----------------------ACAGGTGCCTGGGGAGGTGCCACCAATTTTTGTGAT-CTCCCAGGTTGCCA-GGAA-GAGGAGCTCATCCT--------TGT--------------GCT----AAGAAGAGCAAGAAGAGCAGGTTTTGTCTTGGTTG------------AACTCAGAGGCCCTGGGGGCAGGCATTCCCCTTA- i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 131458 178 + 376347 AGCATCACGTTCGCTTGCTAATGGCTTCG------------------------------------------------CCATCAGATACG----AG-C-----------------------GCAGGTGCCCGGGGAGGTGCCGCCGATCTTTGTCAT-CTCCCAGGATGCCA-GGAA-GAGGAGCTCATCCT--------GGT--------------GCT-------------GAGAAGAGCAGGTTTTGTCTTGGTTG------------AACTCAGAGGCCCTGAGGGCAGGCATTCCCCTCA- i aotNan1.NW_018514293v1 I 20 C 0 s otoGar3.GL873611 2275376 271 - 8137123 ATCATTGTGTGCAACTGCTAATGGCTTTGCCTCAAAGCCTTGGGACTACATGTGGCCTTCTGGATCCTTGAATGCATCCTTTTGACAGA----AT-CCAGATTTTACAGAACAAATTCTTGCAGGTGCCTGGA---GCACCACCCATCTTTGAGAC-TGGCCAGGTTGCTA-GGAAAGAAGAAATAGTCCC--------TGTTTCCTATGGGAAATGTT-------------GAGAACAGCAGGCTTTGTCTTGTTTGAACCTGGATCCTGACTTAGGGGCCCCAAGGGCAGGTATCCTGGC--- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065649 194 - 77573801 AGTGTTGTGCTCATGGGCCATGCCCTCTG------------------------------------------------CCATCAGATGCATCGGCA-C-----------------------GCAGGGGCCTGGGGGGACACCCACTGTCTTCAGGAT-CTCCAAAGTTACCA-GGGAGGAAGAGCTCAGCCTGTCCTGAATCT--------------GTTTCTACGGTAACGCAAGACCAGCTGGTTTTGTCTCTGTTG------------GA-----------TGAGGGCAGGCATCCTCTCTGG i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I a score=58727.000000 s hg38.chr7_KI270899v1_alt 175494 13 + 190869 CAAGCGCTCCCCA s panTro5.chr7_NW_015973580v1_random 50820 13 - 83720 CAAGTGCCCCCCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565390 13 + 162613886 CAAGCGCTCCCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136820 13 - 432965 CAAGCGCTCCCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196369 12 + 85365473 TGAGCGCTCCCC- i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427237 13 - 9440265 CAAGGGCCCCCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17017173 13 - 21915920 CAAGGGCCCCCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 149382 13 - 21531802 CAAGGGCTCCCCC i chlSab2.chr28 C 0 I 27 s manLeu1.NW_012101810v1 184013 13 - 2515279 CAAGGGCCCCCCA i manLeu1.NW_012101810v1 C 0 I 109 s colAng1.NW_012117710v1 341596 9 + 6586416 --AGGGCTCCC-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72228 13 + 138751 AAAGGGCTCCCCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385438 13 - 2409723 AAAGGGCTCCCCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546629 13 - 2125214 AAAGGGCTCCCCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131636 13 + 376347 AAATGGCTCCCCA i aotNan1.NW_018514293v1 C 0 I 26 s otoGar3.GL873611 2275647 10 - 8137123 -AAAGTCTTCA-- i otoGar3.GL873611 C 0 I 3 s canFam3.chr6 61065843 8 - 77573801 CCAGGGCT----- i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043567 225 + 185818997 I a score=1293.000000 s hg38.chr7_KI270899v1_alt 175507 3 + 190869 GGG-- s panTro5.chr7_NW_015973580v1_random 50833 3 - 83720 GGG-- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565403 3 + 162613886 GGG-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136833 3 - 432965 GGG-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196381 3 + 85365473 GGG-- i nomLeu3.chr20 C 0 C 0 s chlSab2.chr28 149422 3 - 21531802 GGG-- i chlSab2.chr28 I 27 I 43 s colAng1.NW_012117710v1 341605 2 + 6586416 -GA-- i colAng1.NW_012117710v1 C 0 C 0 s canFam3.chr6 61065851 3 - 77573801 --GTA i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2275657 3 - 8137123 I e manLeu1.NW_012101810v1 184026 109 - 2515279 I e cerAty1.NW_012002954v1 17017186 0 - 21915920 C e macNem1.NW_012019910v1 4427250 0 - 9440265 C e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043567 225 + 185818997 I e aotNan1.NW_018514293v1 131649 26 + 376347 I e saiBol1.JH378296 385451 0 - 2409723 C e cebCap1.NW_016107703v1 546642 0 - 2125214 C e calJac3.chrUn_GL286444 72241 0 + 138751 C a score=110355.000000 s hg38.chr7_KI270899v1_alt 175510 38 + 190869 GGAGACCCCTCGGGCCAGGACTCCCAGGGCC--------------------------------------------------------------CACACAG s panTro5.chr7_NW_015973580v1_random 50836 38 - 83720 GGAGACCCCTCGGGCCAGGACTCCCAGGGCC--------------------------------------------------------------CACACAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565406 38 + 162613886 GGAGACCCCTCGGGCCAGGACTCCCAGGGCC--------------------------------------------------------------CCCACAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136836 38 - 432965 GGAGACCCCTCGGGCCAGGACTCCCAGGGCC--------------------------------------------------------------CACACAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196384 38 + 85365473 GGAGACCCCTCGGGCCAGGACTCCCAGGGCC--------------------------------------------------------------CACACAG i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427250 100 - 9440265 GGAGACCCCTCGGGCCAGGACTCCCAGGGCCCCCCAGGAGACCCCTCGGGATGGGACTCCCAAGGGCCCCCCAGGAGACCCCTCGGGACAGGACTCCCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17017186 37 - 21915920 GGAGACCCCTCGGGCCAGGACTCCCAGGGC---------------------------------------------------------------CCCCCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 149468 38 - 21531802 GGAGACCCCTCGGGACGGGACTCCCAGGGCC--------------------------------------------------------------CACACAG i chlSab2.chr28 I 43 C 0 s manLeu1.NW_012101810v1 184135 38 - 2515279 GGAGACCCCTCGGGACAGGACTCCCAGGGCC--------------------------------------------------------------CACACAG i manLeu1.NW_012101810v1 I 109 C 0 s colAng1.NW_012117710v1 341607 38 + 6586416 GGAGATCCCTTGGGACGGGACTCCCAGGGCC--------------------------------------------------------------CACACAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72241 26 + 138751 GGAGACCCCGAGGGCCAGGTGTTTGG-------------------------------------------------------------------------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385451 26 - 2409723 GGAGACCCCGAGGGCCAGGTGTTTGG-------------------------------------------------------------------------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546642 26 - 2125214 GGAGACCCCAAGGGCCAGGTGTTTGG-------------------------------------------------------------------------- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2275660 22 - 8137123 GGAGACCCCTAGCACTGGGCAG------------------------------------------------------------------------------ i otoGar3.GL873611 I 3 C 0 s canFam3.chr6 61065854 31 - 77573801 GGGGACCCCTCTGACCACCTGCCCCGGGCAG--------------------------------------------------------------------- i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043567 225 + 185818997 I e aotNan1.NW_018514293v1 131649 26 + 376347 I a score=15836.000000 s hg38.chr7_KI270899v1_alt 175548 2 + 190869 AG s panTro5.chr7_NW_015973580v1_random 50874 2 - 83720 AG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565444 2 + 162613886 AG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136874 2 - 432965 AG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196422 2 + 85365473 AG i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427350 2 - 9440265 GG i macNem1.NW_012019910v1 C 0 I 11 s cerAty1.NW_012002954v1 17017223 2 - 21915920 GA i cerAty1.NW_012002954v1 C 0 I 69 s chlSab2.chr28 149506 2 - 21531802 AG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 184173 2 - 2515279 AG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341645 2 + 6586416 AG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72267 2 + 138751 AG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385477 2 - 2409723 AG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546668 2 - 2125214 AG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131675 2 + 376347 AG i aotNan1.NW_018514293v1 I 26 C 0 s otoGar3.GL873611 2275682 2 - 8137123 AG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61065885 2 - 77573801 AA i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043567 225 + 185818997 I a score=77476.000000 s hg38.chr7_KI270899v1_alt 175550 12 + 190869 CCTG--GTGTTCGG s panTro5.chr7_NW_015973580v1_random 50876 12 - 83720 CCTG--GTGTTCGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565446 12 + 162613886 CCTG--GTGTTCGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136876 12 - 432965 CCTG--GTGTTCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196424 12 + 85365473 CCTG--GCGTTCTG i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427363 12 - 9440265 CCTG--GTGTTCGG i macNem1.NW_012019910v1 I 11 C 0 s chlSab2.chr28 149508 12 - 21531802 GCTG--GTGTTCGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 184175 12 - 2515279 CCTG--GTGTTCGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341647 12 + 6586416 CCTG--GCGTTCGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72269 12 + 138751 CCTG--GTATTCAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385479 12 - 2409723 CCTG--GTATTCAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546670 12 - 2125214 CCTG--GTATTTAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131677 12 + 376347 CCTG--GTATTCAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2275684 12 - 8137123 -CTG-TGTGTACAG i otoGar3.GL873611 C 0 I 15 s canFam3.chr6 61065887 14 - 77573801 CCTGAGGTGTGCAA i canFam3.chr6 C 0 C 0 e cerAty1.NW_012002954v1 17017225 69 - 21915920 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043567 225 + 185818997 I a score=696322.000000 s hg38.chr7_KI270899v1_alt 175562 104 + 190869 AGGACA--GAGCCTGTGGGG-A------CCAAGGGCA--------GGCACAGCTG--------------GGCTCGCACC--------GACAGCTGGGGAG-----------GGAGGGGGAGCTGGAGCCTGAACTGACCCCTTTGGTGGTGGGG- s panTro5.chr7_NW_015973580v1_random 50888 104 - 83720 AGGACA--GAGCCTGTGGGG-A------CCAAGGGCA--------GGCACAGCTG--------------GGCTCGCACC--------GACAGCTGGGGAG-----------GGAGGGGGAGCTGGAGCCTGAACTGACCCCTTTGGTGGTGGGG- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565458 104 + 162613886 AGGACA--GAGCCTGTGGGG-A------CCAAGGGCA--------GGCACAGCTG--------------GGCTCGCACC--------GACAGCTGGGGAG-----------GGAGGGGGAGCTGGAGCCTGAACTGACCCCTTTGGTGGTGGGG- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136888 103 - 432965 AGGACA--GAGCCTGT-GGG-A------CCAAGGGCA--------GGCACAGCTG--------------GGCTCGCACC--------GACAGCTGGGGAG-----------GGAGGGGGAGCTCGAGCCTGAACTGACCCCTTTGGTGGTGGGG- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196436 103 + 85365473 AGGACA--GAACCTGT-GGG-A------CCAAGGGCA--------GGCACAGCTG--------------GGCTCGCACC--------GACAGCTGGGGAG-----------GGAGGGGGAGCTGGAGCCTGAACTGACCCCTTTGGCGGTGGGG- i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427375 104 - 9440265 AGGACA--GAATCTGTGGGT-A------CCAAAAGCG--------GGCACAGCTG--------------GGCTTGCACG--------GAAAGCCGGGGAG-----------GGAGGGGGAGCTGGAGCCAGAACTGGCCCCTTTGGCGGTGGGG- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17017294 104 - 21915920 AGGACA--GAACCTGTGGGG-A------CCAAAAGCG--------GGCACAGCTG--------------GGCTCGCACG--------GAAAGCCGGGGAG-----------GGAGGGGGAGCTGGAGCCAGAACTGGCCCCTTTGGCGGTGGGG- i cerAty1.NW_012002954v1 I 69 C 0 s chlSab2.chr28 149520 104 - 21531802 AGGACA--GAACCTGTGGGG-A------CCAAGAGCA--------GGCACAGCTG--------------GGCTTGCACG--------GACAGCCGGGGAG-----------GGAGGGGGAGCTGGAGCCAGAACTGGCCCCTTTGGCGGTGGGG- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 184187 105 - 2515279 AGGACA--GAACCTGTGGGGAA------CAAAAAGCG--------GGCACAGCTG--------------GGTTCGCACG--------GAAAGCCGGGGAG-----------GGAGGGGGAGCTGGAGCCACAACTGGCCCCTTTGGCGGTGGGG- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341659 118 + 6586416 AGGACA--GAACCTGTGGGG-A------CCAAGGGCG--------GGCACAGCTGGGTGGGCACAGCTAGGCTCGCGTG--------GACAGCTGGGGAG-----------GGAGGGGGAGCTGGAGCCAGAACTGGCCCCTTTGGTGGTGGGG- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72281 103 + 138751 AGGACA--GAGCCTGTGGGA-A------CCGAGGGCA--------GGCACAGCTG--------------GGCTCTCACT--------GACAGCCAGAGAA-----------GGAGGGGT-GTTGGACCCTGAATTGACCCCTTTGGCAGTGGAG- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385491 103 - 2409723 AGGACA--GAGCCTGTGGGA-A------CCGAGGACA--------GGCACAGCTG--------------GGCTCTCACT--------GACAGCTAGAGAG-----------GGAGGGGT-GCTGGACCCTGAATTGATCTCTTTGGCGGGGGGG- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546682 100 - 2125214 AGGACA--GAGTCTGTGGGA-A------CCGAGGGCA--------GGCACAGCTG--------------GGCTCTCACT--------GACA---AGAGAG-----------GGAGGGGT-GTTGGACCCTGAACTGACCCCTTTGGCGGTGGGG- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131689 103 + 376347 AGGGCA--GAGCCTGTGGGA-A------CCGAGGGCA--------GGCAGAGCTG--------------GGCTCTCACT--------GACAGCTAGAGAG-----------GGAGGGGT-GTTGGACCCTGAATCGACCCCTTTGGCGGTGGGG- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2275711 108 - 8137123 AAGGAG--GGACCTGTGGAC-A------CCAAGGGCT--------GGCACCCCTG--------------GGCTTGCACTAAATGGAGGACATCTCAGGATTTTGGTTTGGCAGAAGGGGAAATGGAGTCTCACCTGAAT---------------- i otoGar3.GL873611 I 15 C 0 s canFam3.chr6 61065901 111 - 77573801 AGGACAGGGAGCCTCAGGGG-AAGAGGCCCCGGGGAACTGCTTGGGGCAGACCTGG-------------GGCTTGCACC-------------CAATAAAC-----------AGAGGAGA-CTTGGAATTTTCGTGA-----TTTGGCTGAGGAGG i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34043567 225 + 185818997 I a score=902392.000000 s hg38.chr7_KI270899v1_alt 175666 114 + 190869 TTG-----GTGGGGTACAGG---GAGTCAATGG-CCCAGCCCCAGCGACAGCACAGCAGCTTCCCCAGGAGGAAGGGGAGGCTGAATA-GGAGAGAGAACCCCACCTCCTCCACACC-TGAGGCC s panTro5.chr7_NW_015973580v1_random 50992 114 - 83720 TTG-----GTGGGGTACAGG---GAGTCAATGG-CCCAGCCCCAGAGACAGCACAGCAGCTTCCCCAGGAGGAAGGGGAGGCTGAATA-GGAGAGAGAACCCCACATCCTCCACACC-TGAGGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565562 114 + 162613886 TTG-----GTGGGGTACAGG---GAGTCAATGG-CCCAGCCCCAGAGACAGCACAGCAGCTTCCCCAGGAGGAAGGGGAGGCTGAATA-GGAGAGAGAACCCCACATCCTCCACACC-TGAGGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 136991 115 - 432965 TTG-----GCGGGGTACAGG---GAGTCAATGGCCCCAGCCCCAGCGACAGCACAGCAGCTTCCCCAGGAGGAAGGGGAGGCTGAATA-GGAGAGAGAACCCCACATCCTCCACACC-TGAGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196539 115 + 85365473 GTG-----GTGGGGTACAGG---GAGTCAGTGgccccagccccagcgacagcacagcctctcccccagGGGGAAGGGGAGGCTGAATA-GGAGAGAGAACCCCACGCCCTCCACACC-TGAGGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34043792 115 + 185818997 TTG-----GCGGGGTACAGG---GAGTCAATGgccccagccccagcgacagcacagccgcccccccagAGGGAAGGGGATGCTGAATG-GGACAGAGAACCCCACATCCTCCACACC-TGAGGCC i rheMac8.chr3 I 225 C 0 s macNem1.NW_012019910v1 4427479 115 - 9440265 GTG-----GCGGGGTACAGG---GAGTCAATGgccccagccccagcgacagcacagccgcccccccagGGGGAAGGGGATGCTGAATG-GGACAGAGAACCCCACATCCTCCACACC-TGAGGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17017398 115 - 21915920 GTG-----GCGGGGTACAGG---GAGTCAATGgccccagccccagcgacagcacagccgcccccccagGGGGAAGGGGATGCTGAATG-GGACAGAGAACCCCACGTCCTCCACACC-TGAGGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 149624 115 - 21531802 GTG-----GTGGGGTACAGG---GAGTCAATGgccccagccccagcgacagcacagccgcccccccagGGGGAAGGGGAGGCTGAATA-GGACAGAGAACCCCACGTCCTCCACACC-TGAGGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 184292 115 - 2515279 GTG-----GCGGGGTACAGG---GAGTCAATGgccccagccccagcgacagcacagccgcccccccagGGGGAAGGGGATGCTGAATG-GGACAGAGAACCCCACGTCCTCCACACC-TGAGGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341777 114 + 6586416 GTG-----GCGGGGTACAGG---GAGTCAATGgccccagccccagcgacagcacagccg-ccccccagGGGGAAGGGGAGGCTGAATA-GGACAGAGAACCCCACGTCCTCCACACC-TGAGGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72384 115 + 138751 TTG-----GTGGGGTGCAGG---GAGACAATGGCCCCCTCCCCAGCTGCAGCAGGGCTGCTCCCCCTGGGAAAAGGGGAGAATGAATA-GGAGAGAGAACCCCACGCACCCTACATG-TGAGGCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385594 115 - 2409723 TTG-----GTGGGGTGCAGG---GAGTCAATGGTCCCCGCTCCAGCTGCAGCAGAGTTGCTCCCCCTGGGAAAACAGGAAGATGAATA-GGAGCGAGAACCCCATGCCCCCTACATG-CGAGGCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546782 115 - 2125214 TTG-----GTGGGGTGCAGG---GAGTCAACGGCCCCTGCCCCAGCTGCAGCAGAGCTGCTCCCCCTGGGAAAAGGGGAGGATGAACA-GGAGAGAGAACCCCACGCCCCCTACATG-TGAGGCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 131792 115 + 376347 TTG-----GTGGGGTGCGGG---GAGTCAACGGCCCCCGCCCCGGCTGCAGCAGAGCTGCTCCCCCTGGGAAAAGGGGAGGATGAATA-GGAGAGGGAACCCCACGCCCCCTACCTG-TGAGGCC i aotNan1.NW_018514293v1 C 0 I 8688 s otoGar3.GL873611 2275819 97 - 8137123 --------GAGGGATTCAGA---GGGTGGTT--------------CAACAGCACAGCCACTGCCT---GGGGACGGGGAGGCTGGATGCTGAGAGATAACCTGGCATCCTTCATACCAGGAGGCC i otoGar3.GL873611 C 0 I 3 s canFam3.chr6 61066012 90 - 77573801 TTGTCAGCACTGGCTATAGGGGTGGGTCAATG--CACTTCTTCACATGCTGC----CCCCTACCCCTGG------------------A-GAATTGACACCCCCATACCA---------GGAGGA- i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I a score=443437.000000 s hg38.chr7_KI270899v1_alt 175780 47 + 190869 ---GTAGCCCGAGGCTTTCACTCCAGACCCAGGCATGTACGGGCTCTG-AT s panTro5.chr7_NW_015973580v1_random 51106 47 - 83720 ---GTAGCCCGAGGCTTTAACTCCAGACCCAGACATGTACGGGCTCTG-AT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565676 47 + 162613886 ---GTAGCCCGAGGCTTTCACTCCAGACCCAGACATGTACGGGCTCTG-AT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137106 47 - 432965 ---GTAGCCCGAGGCTTTCACTCCAGACCCAGACATGTACGGGCTCTG-AT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 196654 47 + 85365473 ---ATAGCCCAAGGCTTTCGCTCCAGACCCAGACATGTACAGGCTCTG-AT i nomLeu3.chr20 C 0 I 321 s rheMac8.chr3 34043907 47 + 185818997 ---ATAGCCCGAGGCTTTCACTCCAGACCCAGACATGTACCGGCTCTG-AT i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4427594 47 - 9440265 ---ATAGCCCGAGGCTTTCACTCCAGACCCAGACATGTACCGGCTCTG-AT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17017513 47 - 21915920 ---ATAGCCTGAGGCTTTCACTCCAGACCCAGACAGGTACTGGCTCTG-AT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 149739 47 - 21531802 ---ATAGCCCGAGGCTTTCACTGCAGACCCAGACATGTACCGGCTCTG-AT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 184407 47 - 2515279 ---ATAGCCTGAGGCTTTCACTCCAGACCCAGACATGTACCGGCTCTG-AT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341891 47 + 6586416 ---ATAGCCCGAGGCTTTCACTCCAGACCCAGACATGTCCGGGCTCTG-AT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72499 47 + 138751 ---ATACCCTGAGGCTTCTGCTCCAGACCCGGACATGAACAGGCTCTG-AT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385709 47 - 2409723 ---ATACCCTGAGGCTTCCACTCCAGACCCAGACATGAACAGGCTCTG-AT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546897 47 - 2125214 ---ATATCCTGAGGCTTCCGCTCCAGACCCAGACATGAACAGGCTCTG-AT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 140595 47 + 376347 ---GTACCCTGAGGCTTCCGCTCCAGACCCAGACACCAACGGGCTCTG-AT i aotNan1.NW_018514293v1 I 8688 C 0 s otoGar3.GL873611 2275919 47 - 8137123 ---TCAGCATGAGGCTTTTGCTCCACACCCAGAAATTTGAGGGCTCTG-AA i otoGar3.GL873611 I 3 I 2 s canFam3.chr6 61066102 51 - 77573801 GTAGCAGCATGGGATTTGTGCTCTAAACCTGGAAATTTGAGGGCTCTGTAT i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I a score=2104922.000000 s hg38.chr7_KI270899v1_alt 175827 206 + 190869 AAGAGGTTCC-CTGTAATTTA--TCCTCACTTGAATCTCAAATTTGCTTCTAAATATCCAATCTTTTTTGTCTAATGTATGCGTTTTCATCCCTAATCACCAAACCTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGTCTCCTTCTGAAATTACTCCTCC-GCACCCAGGAAAAAA-CAGAATGA s panTro5.chr7_NW_015973580v1_random 51153 207 - 83720 AAGAGGTTCC-CTGTAATTTA--TCCTCACTTGAATCTCAAATTTGCTTCTAAATATCCAATCTTTTTTGTCTAATATATGCGTTTTCATCCCTAATCACCAAACCTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGTCTCCTTCTGAAATTACTCCTCCCGCACCCAGGAAAAAA-CAGAATGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565723 206 + 162613886 AAGAGGTTCC-CTGTAATTTA--TCCTCACTTGAATCTCAAATTTGCTTCTAAATATCCAATCTTTTTTGTCTAATATATGCGTTTTCATCCCTAATCACCAAACCTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGTCTCCTTCTGAAATTACTCCTCC-ACACCCAGGAAAAAA-CAGAATGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137153 206 - 432965 AAGAGGTTCC-CTGTAATTTA--TCCTCACTTGAATCTCAAATTTGCTTCTAAATATCCAATCTTTTTTGTCTAATATATGCGTTTTCATCCCTAATCAGCAAACCTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGTCTCCTTCTGAAATTACTCCTCT-GCACCCAGGAAAATA-CAGAATGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197022 206 + 85365473 aagaaGTTCC-CTGTAATGTA--TTCTCACTTGAATCTCAAATTTGCTTCTAAATATCCAATCTTATTTGTCTAATATATGCGTTTTCATCTCTAATCACCAAACCTGTAGATTACACTCATGCGTGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGTCTCTTTCTGGAATTACTCCTAC-GCACCCAGGGAAAAA-CAGAATGA i nomLeu3.chr20 I 321 C 0 s rheMac8.chr3 34043954 206 + 185818997 AAGAAGTTCC-CTGTAATTTA--TTCTCCCTTGAGTCTGAAATTTGCTTCTAAATATCCAATCTTGTTTGTCTGATATATGCGTTTTCATCTCGAATCACCAAGCCTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGCCTCCTTCTGAAATTACCCCTCC-GTACCCGGGAAAACA-CAGAATGA i rheMac8.chr3 C 0 I 376 s macNem1.NW_012019910v1 4427641 206 - 9440265 AAGAAGTTCC-CTGTAATTTA--TTCTCCCTTGAGTCTGAAATTTGCTTCTAAATATCCAATCTTGTTTGTCTGATATATGCGTTTTCATCTCGAATCACCAAGCCTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGCCTCCTTCTGAAATTACCCCTCC-GTACCCGGGAAAACA-CAGAATGA i macNem1.NW_012019910v1 C 0 I 5 s cerAty1.NW_012002954v1 17017560 206 - 21915920 AAGAAGTTCC-CTGTAATTTA--TTCTCCCTTGAGTCTGAAATTTGCTTCTAAATATCCAATCTTGTTTGTCTGATATATGCGTTTTCATCTCGAATCACCAAGCCTGTAGATTACACCCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGCCTCCTTCTGAAATTACCCCTCC-GTACCCGGGAAAACA-CAGAATGA i cerAty1.NW_012002954v1 C 0 I 370 s chlSab2.chr28 149786 206 - 21531802 AAGAAGTTCC-CTGTAATTTA--TTCTCCCTTGAGTCTGAAATTTGCTTCTAAATATCCAATCTTGTTTGTCTGATATATGCATTTTCATCTCGAATCACCAAGCCTGTAGATTACACTCGTGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGCCTCCTTCTGAAATTACTCCTCC-GTATCCAGGAAAAAA-CAGAATGA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 184454 206 - 2515279 AAGAAGTTCC-CTGTAATTTA--TTCTCCCTTGAGTCTGAAATTTGCTTCTAAATATCCAATTTTGCTTGTCTGATATATGCGTTTTCATCTCGAATCACCAAGCCTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGCCTCCTTCTGAAATTACCCCTCC-GTACCCGGGAAAACA-CAGAATGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 341938 206 + 6586416 AAGAAGTTCC-CTATAATTTT--TTCTCCCTTGAGTCTCAAATTTGCTTCTAAATATCCAATTTTGTTTGTCTGATATATGCGTTTTCATCTCGAATCACCAAGCCTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGCCTCCTTCTGAAGTTACTCCTCC-TTACCCGGGAAAACA-CAGAATGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72546 207 + 138751 AAGAAGTTCC-CTGTAATTTA--TTCTCACTTGAATCTAAAATTTGCTTCTAAACACCCAATCATATTTGTCTAATATATGCATTTTCATCTCTAATCACCAAACTTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTTACAAAATGCCTCCTTCTGAAATTATTCCTCC-GTACCCAGGAAAAAAACAGGATGA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385756 207 - 2409723 AAGAAGTTCC-CTGTAATTTA--TTCTCACTTGAATCTAAAATTTGCTTCTAAATACCCAATCATATTTGTCTAATATATGCATTTTCATCTCTAATCACCAAACTTGTAGATTACACTCATGCATGAAATA---TTTGGTGAATACCTTTTAATTTGACAAAATGCCTCCTTCTGAAATTACTCCTCC-ATAGCCAGGAAAAAAGCAGAATGA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 546944 207 - 2125214 AAGAAGTTCC-CTGTAATTTA--TTCTCACTTGAATCTAAAATTTGCTTCTAAATACCCAATCATATTTATCTAATATATGCATTTTCATCTCTAATCACCAAACTTGTAGACTACACTCATGCATGAAATA---TTTGGTGAATATCTTTTAATTTTACAAAATGCCTCCTTCTGAAATTACTCCTCC-GTACCCAGGAAAAAAGCAGGATGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 140642 192 + 376347 AAGAAGTTCC-CTGCAATTCA--TTCTCACTTGAATCTAAAATTTGCTTCTAAATACCCAATCATATTTGTCTAATATATGCATTTTCATCTCTAATCACCAAACTTGTAGATTACACTCGTGCATGAAATA---TTTGGTGAATACCTTTTACTTTTACAAAATGCC---------------TCCTCC-GTACCCGGGAAAAAAACAGGATGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2275968 209 - 8137123 AGAAGTTTCC-TTGTAATTTATTTTCTCACTTGAATCTTGCAATTGCTTCCAAATATCCAATCTTATTTGTCTAATATTTGCATTTTCATCTCTCATCACCAAACCTGTAGATT--AGTCTTGCATAAAATAATGTTTGGTGAATACCTTTTAATTTTGCAAAATGACTCCTTCTGAAATTACTCTACC-ATGCTTAGGAAAAGA-CAGAATGA i otoGar3.GL873611 I 2 C 0 s canFam3.chr6 61066153 211 - 77573801 AAGAAGTTTTGATGTAATTTAGCCTCTCATTTGAATCTTGCATTTGCCTCCAAATATCAGAACTTATTTGTCTAATATCTATATTTTCATCTCTGCTCAGCAAAGCTGTAGATTCCA-TTACACATAAAATAATGTTTGATGAATGCCTTTTAATATCACAAGATGCCTCTTCCTAAAATTATTCCCCT-CTACCTAGGAAGAGA-CAGAATGA i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I a score=46032.000000 s hg38.chr7_KI270899v1_alt 176033 6 + 190869 TGTCAC s panTro5.chr7_NW_015973580v1_random 51360 6 - 83720 TGTCAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565929 6 + 162613886 TGTCAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137359 6 - 432965 TGTCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197228 6 + 85365473 CGTCAC i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427852 6 - 9440265 CGTCAC i macNem1.NW_012019910v1 I 5 C 0 s chlSab2.chr28 149992 6 - 21531802 CGTCAC i chlSab2.chr28 C 0 I 378 s manLeu1.NW_012101810v1 184660 6 - 2515279 CATCAC i manLeu1.NW_012101810v1 C 0 I 5 s colAng1.NW_012117710v1 342144 6 + 6586416 TGTCAT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72753 6 + 138751 TGTCAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385963 6 - 2409723 TGTCAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 547151 6 - 2125214 TGTCAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 140834 6 + 376347 TGTCAC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2276177 6 - 8137123 CATCAC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61066364 6 - 77573801 TGTCAA i canFam3.chr6 C 0 C 0 e cerAty1.NW_012002954v1 17017766 370 - 21915920 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34044160 376 + 185818997 I a score=123646.000000 s hg38.chr7_KI270899v1_alt 176039 21 + 190869 TGCCAACTTCGAGGTAAAAG-----T s panTro5.chr7_NW_015973580v1_random 51366 21 - 83720 TGCCAACTTCGAGGTAAAAG-----T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565935 21 + 162613886 TGCCAACTTCGAGGTAAAAG-----T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137365 21 - 432965 TGCCAACTTGGAGGTAAAAG-----T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197234 21 + 85365473 TGCCAACTTGGAGGTAAAAG-----T i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427858 21 - 9440265 GGCCAGCTTGGAGGTACAAG-----T i macNem1.NW_012019910v1 C 0 C 0 s manLeu1.NW_012101810v1 184671 21 - 2515279 GGCCAGCTTGGAGGTACAAG-----T i manLeu1.NW_012101810v1 I 5 C 0 s colAng1.NW_012117710v1 342150 21 + 6586416 GGCCAGCTTGGAGGTACAAG-----T i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72759 26 + 138751 TGCCAACTTGGAGGTAAAAGTACTCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385969 21 - 2409723 TGCCAACTTGGAGGTAAAAG-----C i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 547157 21 - 2125214 TGCCAACTTGGAGGTAAAAG-----T i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 140840 21 + 376347 TGCCAACTTGGACGTAAAAG-----T i aotNan1.NW_018514293v1 C 0 I 169 s otoGar3.GL873611 2276183 19 - 8137123 TGGCAACTTGGA--TAAAAG-----T i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61066370 21 - 77573801 TGGAAACTTGGAGATAGAAA-----T i canFam3.chr6 C 0 C 0 e chlSab2.chr28 149998 378 - 21531802 I e cerAty1.NW_012002954v1 17017766 370 - 21915920 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34044160 376 + 185818997 I a score=16987.000000 s hg38.chr7_KI270899v1_alt 176060 4 + 190869 ATTT s panTro5.chr7_NW_015973580v1_random 51387 4 - 83720 ATTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565956 4 + 162613886 ATTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137386 4 - 432965 ATTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197255 4 + 85365473 ATTT i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427879 4 - 9440265 ATTT i macNem1.NW_012019910v1 C 0 C 0 s manLeu1.NW_012101810v1 184692 4 - 2515279 ATTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342171 4 + 6586416 ATTT i colAng1.NW_012117710v1 C 0 I 306 s calJac3.chrUn_GL286444 72785 4 + 138751 ACTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385990 4 - 2409723 ACTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 547178 4 - 2125214 ACTC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2276202 4 - 8137123 GTTT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61066391 4 - 77573801 GTCT i canFam3.chr6 C 0 C 0 e chlSab2.chr28 149998 378 - 21531802 I e cerAty1.NW_012002954v1 17017766 370 - 21915920 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34044160 376 + 185818997 I e aotNan1.NW_018514293v1 140861 169 + 376347 I a score=53569.000000 s hg38.chr7_KI270899v1_alt 176064 10 + 190869 CGCAAATCTT s panTro5.chr7_NW_015973580v1_random 51391 10 - 83720 CGCAAATCTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565960 10 + 162613886 CGCAAATCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137390 10 - 432965 CGCAAATCTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197259 10 + 85365473 CGCAAATCTT i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4427883 10 - 9440265 TGCAAAtctt i macNem1.NW_012019910v1 C 0 I 330 s manLeu1.NW_012101810v1 184696 10 - 2515279 TGCAAAtctt i manLeu1.NW_012101810v1 C 0 I 329 s colAng1.NW_012117710v1 342481 10 + 6586416 cGCAAATCTT i colAng1.NW_012117710v1 I 306 C 0 s calJac3.chrUn_GL286444 72789 10 + 138751 TGTAAATGTT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 385994 10 - 2409723 TGTAAATGTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 547182 10 - 2125214 TGTAAATGTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2276206 10 - 8137123 TGCAAGTCTT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61066395 10 - 77573801 TGCAAGTTTT i canFam3.chr6 C 0 C 0 e chlSab2.chr28 149998 378 - 21531802 I e cerAty1.NW_012002954v1 17017766 370 - 21915920 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34044160 376 + 185818997 I e aotNan1.NW_018514293v1 140861 169 + 376347 I a score=98125.000000 s hg38.chr7_KI270899v1_alt 176074 31 + 190869 AACAATTTTAGC-TTCTACATGCACGTTAGGA s panTro5.chr7_NW_015973580v1_random 51401 31 - 83720 AACAATTTTAGC-TTCTACATGCACGTTAGGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 565970 31 + 162613886 AACAATTTTAGC-TTCTACATGCACGTTAGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137400 32 - 432965 AACAATTTTGGCTTTCTACATGCACGTTAGGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197269 32 + 85365473 AACAATTTTGGCTTTCTACATGCACGTTAGGA i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012117710v1 342491 32 + 6586416 AACAATGTTGGCTTTCTACAAGCAAGTGGGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72799 32 + 138751 AACACTTTTGGCTTTCTGCATGCAAGTTAGCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386004 32 - 2409723 AACACTGTTGGCTTTGTGCATGCAAGTTAGCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 547192 32 - 2125214 AACACTTTTGGCTTTCTGCATGCAAGTTAGCA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2276216 32 - 8137123 ACTAATTTTGGCTTTCTACACGTAGGTTGGCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61066405 31 - 77573801 -ACTGCTCTGGCTTTCTTCATTCAGGCTAGCA i canFam3.chr6 C 0 C 0 e chlSab2.chr28 149998 378 - 21531802 I e manLeu1.NW_012101810v1 184706 329 - 2515279 I e cerAty1.NW_012002954v1 17017766 370 - 21915920 I e macNem1.NW_012019910v1 4427893 330 - 9440265 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34044160 376 + 185818997 I e aotNan1.NW_018514293v1 140861 169 + 376347 I a score=489749.000000 s hg38.chr7_KI270899v1_alt 176105 60 + 190869 AGTGTTGATGGACA-C-AGGATCATA-CTCTACCTATTG-GAGGAAGGAGACGATTTAATTGAT s panTro5.chr7_NW_015973580v1_random 51432 59 - 83720 AGTGTTGATGGACA-C-AGGATCATA-CTCTACCTGTTG-GAGGA-GGAGACGATTTAATTGAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566001 59 + 162613886 AGTGTTGATGGACA-C-AGGATCATA-CTCTACCTGTTG-GAGGA-GGAGACGATTTAATTGAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137432 60 - 432965 AGTGTTGATGGACT-C-AGGATCATA-CTCTACCTGTTG-GAGGAAGGAGACGATTTAACTGAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197301 60 + 85365473 AGTGTTGATGGACA-C-AGGATCATA-CTCTACCTGATA-GAGGAAGGAGACGATTTAATTGAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044536 60 + 185818997 AGTGTTGATGGACA-C-AGAGTCACA-CTCTACCTGTTG-GAGGAAGGGGACGATTTAATTGAT i rheMac8.chr3 I 376 C 0 s macNem1.NW_012019910v1 4428223 60 - 9440265 AGTGTTGATGGACA-C-AGAGTCACA-CTCTACCTGTTG-GAGGAAGGGGACGATTTAATTGAT i macNem1.NW_012019910v1 I 330 C 0 s cerAty1.NW_012002954v1 17018136 60 - 21915920 AGTGTTGATGGACA-C-AGAGTCACA-CTCTACCTGTTG-GAGGAAGGGGACGATTTAATTGAT i cerAty1.NW_012002954v1 I 370 C 0 s chlSab2.chr28 150376 60 - 21531802 AGTGTTGATGGACA-C-AGAGTCACA-CTCTACCTGTTG-GAGGAAGGGGACGATTTAATTGAT i chlSab2.chr28 I 378 C 0 s manLeu1.NW_012101810v1 185035 60 - 2515279 AGTGTTGATGGACA-C-AGAGTCACA-CTCTACCTGTTG-GAGGAAGGGGACAATTTAATTGAT i manLeu1.NW_012101810v1 I 329 C 0 s colAng1.NW_012117710v1 342523 60 + 6586416 AGTGTTGATGGACA-C-AGAGTCACA-CTCGACCTGTTG-GAGGAAGGGGACGATTTAATTGGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72831 60 + 138751 AGTGTTGATGGACA-C-ACACTCATG-CTCCACCTATTG-GAGGAAAGGGACGATTTAATTGAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386036 60 - 2409723 AGTGTTGATAGACA-C-AAAATCATG-CTCCACCTGTTG-GAGGAAAGGGACGATTTAATTGAT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 547224 60 - 2125214 AGCGTTGATGGACA-C-AAACTCATG-CTCCACCTGTTG-GAGGAAAGGGACGATTTAGTTGAT i cebCap1.NW_016107703v1 C 0 I 90 s otoGar3.GL873611 2276248 61 - 8137123 AATGTTGATGAATA-CTAGAATGACG-TTCTACCTTTGA-AAAGAAGGAGACAGTTTAATTGAT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61066436 63 - 77573801 AGCTTTGCTGGGCCTC-AGAGTGACGTCCCCAAATGTTGAGACGAGGGGGACTGTCTGGCTGGT i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 140861 169 + 376347 I a score=323919.000000 s hg38.chr7_KI270899v1_alt 176165 81 + 190869 CATGTCTTCAATT--CCTGT---CCCCACCCT-CCCCGGGCCCCTCTGTCC-------TGGGGGGCCGTGGCCTCGCGATGATC---TAGGCT-------------------------GTGA s panTro5.chr7_NW_015973580v1_random 51491 81 - 83720 GATGACTTCAATT--CCTGT---CCCCACCCT-CCCCGGGCCCCTCTGTCC-------TGGGGGGCCGTGGCCTCGCGATGATC---TAGGCC-------------------------GTGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566060 81 + 162613886 GATGACTTCAATT--CCTGT---CCCCACCCT-CCCAGGGCCCCTCTGTCC-------TGGGGGGCCGTGGCCTCGCGATGATC---TAGGCC-------------------------GTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137492 81 - 432965 GACGTCTTCAATT--CCTGT---CCCCACCCT-CCCCGGGCCCCTCTGTAC-------TGCGGGGCCGTGGCCTCGCGATGATC---TAGGCC-------------------------GTGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197361 81 + 85365473 GACATCTTCAATT--CCTGT---CCCCATCCT-CCCCGGGTCCCTCTGTAC-------TGGGGGGCCGTGGCCTCTTGATGATC---TAGGCC-------------------------GTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044596 79 + 185818997 GACATCTTTGGTT--CCCGT---CCCCATCCT-CCCTGGGCCCCTCTGTAC-------TGGGGGGCTGTGGCCTCGCGATGATC---TAGGCC---------------------------CA i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428283 79 - 9440265 GACATCTTTGGTT--CCCGT---CCCCATCCT-CCCTGGGCCCCTCTGTAC-------TGGGGGGCTGTGGCCTCGCGATGATC---TAGGCC---------------------------CA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018196 79 - 21915920 GACATCTTTGGTT--CCCGT---CCCCATCCT-CCCTGGGCCCCTCTGTAC-------TGGGGGGCTGTGGCCTCGCGATGATC---TAGGCC---------------------------CA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150436 79 - 21531802 GACATCTTCGGTT--CCCGT---CCCCATCCT-CCCTGGGCCCCTCTGTAC-------TGGGGGGCTGTGGCCTCGCGATGATC---TAGGCC---------------------------GA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185095 79 - 2515279 GACATCTTTGGTT--CCCGT---CCCCATCCC-CCCTGGGCCCCTCTGTAC-------TGGGGGGCTGTGGCCTCGCGATGATC---TAGGCC---------------------------CA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342583 78 + 6586416 GACATCTTCAGTT--CCCAT---CCCCATCCT--CCTGGGCCCCTCTGTAC-------TGGGGGGCTGTGACCTTGCGATGATC---TAGGCC---------------------------AA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72891 33 + 138751 AACATCT-------------------------------------------------------------GAGCCTCACAGTGATC---TAGGCT-------------------------GTGA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386096 33 - 2409723 GACATCT-------------------------------------------------------------GAGCCTCACAGTGATC---TAGGCT-------------------------GTGA i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2276309 116 - 8137123 AACATCTTCAATT--TCTGTGTCCCCTGCTTC-CCCCAGGTCCCTTGGTACTGTGGTGTGGGGGGCTGTAGCCTTGAAATGATT---TAGGCcagtgtttctcaaccttcctaatgctgtga i otoGar3.GL873611 C 0 I 175 s canFam3.chr6 61066499 83 - 77573801 AACAGGTTCGATTACTCTGT---CCCCTTCCTCCCCCTGACCCTTCCCTCA-------TCAGGGGCCTCAGCCCCAGATGAATCGGGTAGTCC----------------------------- i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 140861 169 + 376347 I e cebCap1.NW_016107703v1 547284 90 - 2125214 I a score=192900.000000 s hg38.chr7_KI270899v1_alt 176246 31 + 190869 CAGAGGAGC-ACCC--AAATCCTCTTCAGATTCC s panTro5.chr7_NW_015973580v1_random 51572 31 - 83720 CGGAGCAGC-ACCC--AAATCCTCTTCAGATTCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566141 31 + 162613886 CGGAGCAGC-ACCC--AAATCCTCTTCAGATTCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137573 31 - 432965 CGGAGCAGC-ACCC--AAACCCTCTTCCGATTCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197442 31 + 85365473 TGGAGCAGC-ACCC--AAATCCTCTTCAGATTCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044675 31 + 185818997 CAGAGCAGC-CCCC--AAATCCTCTTCAGATTCC i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428362 31 - 9440265 CAGAGCAGC-CCCC--AAATCCTCTTCAGATTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018275 31 - 21915920 CAGAGCAGC-CCCC--AAATCCTCTTCAGATTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150515 32 - 21531802 CCGAGCAGCACCCC--AAATCCTCTTCAGATTCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185174 31 - 2515279 CAGAGCAGC-CCCC--AAATCCTCTTCAGATTCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342661 32 + 6586416 CAGAGCAGCACCCC--AAATCCCCTTCAGATTCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72924 31 + 138751 CTGAGCAGCCCCCC--AAATCCTCTTCAGACTC- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386129 32 - 2409723 CTGAGCAGCCCCCC--TAATCCTCTTCAGACttt i saiBol1.JH378296 C 0 I 301 s otoGar3.GL873611 2276600 33 - 8137123 CAGAGCAAC-ACCCTGGAACACTCTTCACATGCC i otoGar3.GL873611 I 175 I 5 s canFam3.chr6 61066582 31 - 77573801 CAAGGCAGC-ACCC--CAAGGCCTTGCAGTCTGG i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 140861 169 + 376347 I e cebCap1.NW_016107703v1 547284 90 - 2125214 I a score=92130.000000 s hg38.chr7_KI270899v1_alt 176277 26 + 190869 TTTCAACTCG----------------------GCTGTGACGTCTGCGT s panTro5.chr7_NW_015973580v1_random 51603 26 - 83720 TTTCAACTCG----------------------GCTGTGACGTCTGCGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566172 26 + 162613886 TTTCAACTCG----------------------GCTGTGACGTCTGCGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137604 26 - 432965 TTTCAACTCG----------------------GCTGTGACTTCTGCTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197473 26 + 85365473 TTTCAACTCG----------------------GCTGTGGCGCCTGTGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044706 28 + 185818997 TTTCAACTCGG--------------------TGCTGTGACGTCTGTGA i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428393 28 - 9440265 TTTCAACTCGG--------------------TGCTGTGACGTCTGTGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018306 28 - 21915920 TTTCAACTCGG--------------------TGCTGTGACGTCTGTGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150547 27 - 21531802 -TTCAACTCGG--------------------TGCTGTGACGTCTGTGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185205 28 - 2515279 TTTCAACTCGG--------------------TGCTGTGACGTCTGTGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342693 28 + 6586416 TTTCAACTCGG--------------------TGCTGAGACGTCTGTGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72955 26 + 138751 TTTCAACTCCG--------------------TGCCGTGACGTGTGC-- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386462 26 - 2409723 TTTCAACTCCA--------------------CGCCGTGGCACGTGC-- i saiBol1.JH378296 I 301 C 0 s otoGar3.GL873611 2276638 42 - 8137123 CTTCGGCTCTGAAGGCATCT------ATCTCCATTGTAACATCTGTCT i otoGar3.GL873611 I 5 C 0 s canFam3.chr6 61066613 31 - 77573801 ----------------ATCTGGAGGCATCTGCATTGTAATGTCTGTG- i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 140861 169 + 376347 I e cebCap1.NW_016107703v1 547284 90 - 2125214 I a score=114485.000000 s hg38.chr7_KI270899v1_alt 176303 14 + 190869 CTTCATAAGAAAGG s panTro5.chr7_NW_015973580v1_random 51629 14 - 83720 CTTCATAAGAAAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566198 14 + 162613886 CTTCATAAGAAAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137630 14 - 432965 CTTCATAAGAAAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197499 14 + 85365473 CTTCATAAGAAAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044734 14 + 185818997 CTTCATGAGAAAGG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428421 14 - 9440265 CTTCATGAGAAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018334 14 - 21915920 CTTCATAAGAAAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150574 14 - 21531802 CTTCATGAGAAAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185233 14 - 2515279 CTTCATGAGAAAGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342721 14 + 6586416 CTTCATGAGAAAGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72981 14 + 138751 CTTTGTAAGAAACA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386488 14 - 2409723 CTTCGTAAGAAACA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 547374 14 - 2125214 CTTCATAAGAAACA i cebCap1.NW_016107703v1 I 90 C 0 s otoGar3.GL873611 2276680 14 - 8137123 GTTCACAAGAAGGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61066644 13 - 77573801 -TTTACAAGGAAGC i canFam3.chr6 C 0 C 0 e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 140861 169 + 376347 I a score=630735.000000 s hg38.chr7_KI270899v1_alt 176317 81 + 190869 ACGTGTTTCCGAGCGGCCACTGAGAACTACAGGCAGGCCGA-CCGGCAAACCACCCACAGCCAGC----AC---------CG--------GGAGCTGCAGAAG s panTro5.chr7_NW_015973580v1_random 51643 81 - 83720 ACGTGTTTCCGAGCGGCCACTGAGAACTACAGGCAGGCCGA-CCGGCAAACCACCCACAGCCAGC----AC---------CG--------GGAGCCGCAGAAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566212 81 + 162613886 ACGTGTTTCCGAGCGGCCACTGAGAACTACAGGCAGGCCGA-CCGGCAAACCACCCACAGCCAGC----AC---------CG--------GGAGCCGCAGAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137644 90 - 432965 ACGTGTTTCCGAGCGGCCACCGAGAACTACAGGCAGGCCGA-CCGGCAAACCACCCACAGCCAGC----ACCGGGAGCCGCG--------GGAGCCGCAGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197513 80 + 85365473 ACGGGCTTCCAAGCAGCCGCTGAGAACCACAGCCAGGCTGA-CCGGCAAACCACCCACAGCCAGC----A----------CG--------GGAGCCGCAGAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044748 81 + 185818997 ACGCGCTTCCAAGCAGCCGCTGAGAGCGACAGCCAGGCCGA-CCGGCAAACAGCCCACAGCCAGC----AC---------GA--------GGAGCCGCAGAAG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428435 81 - 9440265 ACGTGCTTCCAAGCAGCCGCTGAGAGCGACAGCCAGGCCGA-CCGGCAAACAGCCCACAGCCAGC----AC---------GG--------GGAGCCGCAGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018348 81 - 21915920 ACGCGCTTCCAAGCAGCCGCTGAGAGCGACAGCCAGGCCGA-CCGGCAAACAGCCCACAGCCAGC----AC---------GG--------GGAGCCGCAGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150588 78 - 21531802 ACAAA---AAAAAAAGCTGCTGAAAGCGACAGCCAGGCCGA-CCGGCAAACAGCCCACAGCCAGC----AC---------GG--------GGAGCCGCAGAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185247 81 - 2515279 ACGCGCTTCCAAGCAGCCGCTGAGAGCGACAGCCAGGCCGA-CTGGCAAACAGCCCACAGCCAGC----AC---------GG--------GGAGCCGCAGAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342735 81 + 6586416 ACGCGCTTCCAAGCGGCTGCTGAGAGCGACAGCCAGGCCGA-CCGGCAAACGGCCCACAGCCAGC----AC---------GG--------GGAGCCCCAGAAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 72995 80 + 138751 ATGCGCTTCCAAGTGGCCGCTGAGAACTACAGCCAGGCCAA-TGCAGAAACAA-CCACAGCCAGC----AC---------AG--------GGAGCTGCAGAAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386502 85 - 2409723 ACGTGCTTCCAAGTGGTCGCTGAGAACCACAGCCAGGCCTA-CGGGGAAACAACCCACAGCCAGCCAGGAC---------GG--------GGAGCCGCAGAAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 547388 81 - 2125214 ATGTGCTTCCAAGTGGCCACTGAGAACTACATCCGGGCCAA-CCAGGAAACAACCCAGAGCCAGC----AC---------GG--------GGAGCCACAGAAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 141030 79 + 376347 ACGTGCTTCCGAGCGGCCGCTGAGAACTACAGCCAGGCCGG-CGGGGAAACAACCCACAGCCAGC----CC---------GG--------GGAGC--CAGAAG i aotNan1.NW_018514293v1 I 169 C 0 s otoGar3.GL873611 2276694 63 - 8137123 ACATGCTTCACAGTGGCCATTGAGCGCTACAGCTGGGCC-------------------AGCCAAC----AC---------CA--------GGATCTGCGGACG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61066657 88 - 77573801 --GTGCATTTTGCTGCCGGCTGCGAACCACATCTGGGCCAATCCAGCCAACAGCGTCTAGCCAGC----CC---------CGCACCCACAAAAGCTGCACAAG i canFam3.chr6 C 0 I 4489 e macFas5.chr3 33595647 70765 + 192294377 I a score=425176.000000 s hg38.chr7_KI270899v1_alt 176398 66 + 190869 --CCACGGGGCCCTCACA-GGGGTTCTCTGTCTCCTCCATGGA-----GGTGCTCCCTGTCT-ATCTGCTGGGCC s panTro5.chr7_NW_015973580v1_random 51724 66 - 83720 --CCACAGGGCCCTCACA-GGGGGTCTCCGTCTCCTCCATGGA-----GGTGCTCCCTGTCT-ATCTGCTGGGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566293 66 + 162613886 --CCACAGGGCCCTCACA-GGGGGTCTCCATCTCCTTCATGGA-----GGTGCTCCCTGTCT-ATCTGCTGGGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137734 66 - 432965 --CCACAGGGCCCTCACA-GGGGGTCTCCGTCTCCTCCATGGA-----GGTGCTCCCTGTCT-ATCTGCTGGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197593 65 + 85365473 --CCACAGGGCCCTCACA-GGGG-TCTCCGCCTCCTCCATGGA-----GGTGCTCCCTGTCT-ATCTGCTGGGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044829 65 + 185818997 --CCACAGCGCCCACACG-GGGG-TCTCCATCCCCTCCATGGA-----GGTGCTCCCTGCCT-ATCCGCTGGGCC i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428516 65 - 9440265 --CCACAGCGCCCACACG-GGGG-TCTCCATCCCCTCCATGGA-----GGTGCTCCCTGCCT-ATCCGCTGGGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018429 65 - 21915920 --CCACAGCGCCCACACG-GGGG-TCTCCATCCCCTCCATGGA-----GGTGCTCCCTGCCT-ATCCGCTGGGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150666 65 - 21531802 --CCACAGCGTCCACACG-GGGG-TCTCCGTCCCCTCCATGGA-----GGTGCTCCCTGCCC-ATCTGCTGGGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185328 65 - 2515279 --CCACAGCGCCCACACA-GGGG-TCTCCATCCCCTCCATGGA-----GGTGCTCCCTGCCT-ATCCGCTGGGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342816 65 + 6586416 --CCACAGCGCTCACACC-GGGG-TCTCCGTCCCCTCCATGGA-----GGTGCTCCCTGCCT-CTCTGCTGGGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 73075 42 + 138751 ---------------------------CTGTCTCCCCCACGGA-----GCTGCTGCTTGTCC-ACCTGCTGGGCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386587 64 - 2409723 --CCAC---GTCCATGCAGGGGGGTCTCCGTCTCCCCCACGGA-----GCTGCTGCTGGTGC-ACCTGCTGGGCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 547469 63 - 2125214 --CCAG---GCCCATGCA-GGGGGTCTCCGTCTCCCCCACGGA-----GCTGCTGCTTGTCC-ACCTGCTGGGCC i cebCap1.NW_016107703v1 C 0 I 373 s aotNan1.NW_018514293v1 141109 63 + 376347 --TCAC---GCCCAGGCC-GGGGGTCTCCGTCTCCCCCACCAA-----GCTGCTGCTTGTCT-ACCTGCTGGGCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2276757 70 - 8137123 TGCCAT---GTCTACACA-CAGG-GCTCCATCTCCACTGTGGATGCCTGCCCCACCTTGTCTAACCTTCTGGGAC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I a score=47271.000000 s hg38.chr7_KI270899v1_alt 176464 9 + 190869 CGCTCACAG s panTro5.chr7_NW_015973580v1_random 51790 9 - 83720 CGCTCACAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566359 9 + 162613886 CGCTCACAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137800 9 - 432965 CGCTCACAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197658 9 + 85365473 CACCCACAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044894 9 + 185818997 CACTCACAG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428581 9 - 9440265 CACTCACAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018494 9 - 21915920 CACTCACAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150731 9 - 21531802 CGCTCACAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185393 9 - 2515279 CACTCACAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342881 9 + 6586416 CGCCCACAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 73117 9 + 138751 TGCAAACAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386651 9 - 2409723 TGCAAACAG i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 141172 9 + 376347 TGCAAACAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2276827 7 - 8137123 TGCTTGT-- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I e cebCap1.NW_016107703v1 547532 373 - 2125214 I a score=86805.000000 s hg38.chr7_KI270899v1_alt 176473 10 + 190869 GGCCCCTCCA s panTro5.chr7_NW_015973580v1_random 51799 10 - 83720 CGCCCCTCCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566368 10 + 162613886 CGCCCCTCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137809 10 - 432965 GGCCCCTCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197667 10 + 85365473 GGCTCCTCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044903 10 + 185818997 GGCCCCTCTG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428590 10 - 9440265 GGCCCCTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018503 10 - 21915920 GGCCCCTCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150740 10 - 21531802 GGTCCCTCCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185402 10 - 2515279 GGCCTCTCCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342890 10 + 6586416 GGCCCCTCCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 73126 10 + 138751 GACCCCTCTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386660 10 - 2409723 GACCCCTCCA i saiBol1.JH378296 C 0 I 121 s cebCap1.NW_016107703v1 547905 10 - 2125214 GGCCCCTCCA i cebCap1.NW_016107703v1 I 373 C 0 s aotNan1.NW_018514293v1 141181 10 + 376347 GACCCCTCCG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2276834 10 - 8137123 GGCCCCTCTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I a score=102457.000000 s hg38.chr7_KI270899v1_alt 176483 14 + 190869 CGGATGGTGCCCGG s panTro5.chr7_NW_015973580v1_random 51809 14 - 83720 CGGACGGTGCCCGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566378 14 + 162613886 TGGACGGTGCCTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137819 14 - 432965 CGGACGGTGCCCGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197677 14 + 85365473 CGGACGGTGCCCGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044913 14 + 185818997 CGGACGCTGCCCGG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428600 14 - 9440265 CGGACGCTGCCCGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018513 14 - 21915920 CGGACGCTGCCCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150750 14 - 21531802 CGGACGCTGCCCGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185412 14 - 2515279 CGGACGCTGCCCGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342900 14 + 6586416 TGGACGCTGCCCGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 73136 14 + 138751 CAGACCCTGTCTGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 386791 14 - 2409723 CAGACCCTGCCCGG i saiBol1.JH378296 I 121 C 0 s cebCap1.NW_016107703v1 547915 14 - 2125214 CGGATGCTGACCGG i cebCap1.NW_016107703v1 C 0 I 161 s aotNan1.NW_018514293v1 141191 14 + 376347 CGGACCCTGCCCGT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2276844 14 - 8137123 TGAAGACTTCCAGC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I a score=121731.000000 s hg38.chr7_KI270899v1_alt 176497 13 + 190869 CCTCCCTCACGTC s panTro5.chr7_NW_015973580v1_random 51823 13 - 83720 CCTCCCTCACGTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566392 13 + 162613886 CCTCCCTCACGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137833 13 - 432965 CCTCCCTCACGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197691 13 + 85365473 CCTCCCTCACGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044927 13 + 185818997 CCTCCCTCACCCC i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428614 13 - 9440265 CCTCCCTCAGCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018527 13 - 21915920 CCTCCCTCACCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150764 13 - 21531802 CCTCCCTCACCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185426 13 - 2515279 CCTCCCTCACCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342914 13 + 6586416 CCTCCCTCACCTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 73150 13 + 138751 TCTCTCTCACCTC i calJac3.chrUn_GL286444 C 0 I 1245 s saiBol1.JH378296 386805 13 - 2409723 CCTCCCTCACCTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 548090 13 - 2125214 CCTCCCTCACCTC i cebCap1.NW_016107703v1 I 161 C 0 s aotNan1.NW_018514293v1 141205 12 + 376347 -CCCCCTCACCTC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2276858 13 - 8137123 CCTCCCTCACCTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I a score=869037.000000 s hg38.chr7_KI270899v1_alt 176510 144 + 190869 CTCGAGGCGTCCCTCGGTCAGGTACTTAGAATCTGCGTCT-CCCACCTGCTTTTCCCAAGGCTGCAGCTTCCCCTGGACAAGAGCGGAGC-CTGGGCTCCCAGTGCCAGGTTACTAGCCCAGGACCTGGCCCCTGGCAGATGCTGG s panTro5.chr7_NW_015973580v1_random 51836 144 - 83720 CTCGAGGCGTCCCTCGGTCAGGTACTTAGAATCTGCGTCT-CCCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCTGGACAAGAGCGGAGC-CTGGGCTCCCAGTGCCGGGTTACTAGCCCAGGACCTGGCCCCTGGCAGATGCTGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566405 144 + 162613886 CTCAAGGCGTCCCTCGGTCAGGTACTTAGAATCTGCGTCT-CCCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCTGGACAAGAGCGGAGC-CTGGGCTCCCAGTGCCGGGTTACTAGCCCAGGACCTGGCCCCTGGCAGATGCTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137846 142 - 432965 CTCGAGGCGTCCCTC-GTCAGGTACTTAGAATCTGCGTCT-CCCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCTGGACAAGAGCGGAGC-CTGGGCTCCCAGTGCCGGGTTACTAGCCCAGGACCTGG-CCCTGGCAGATGCTGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197704 143 + 85365473 CCCGAGGCGTCCCTCGGTCAGGTACTTAGAATCTGCGGCT-CCCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCAGGATGAGAGCGGGG--CTGGGCTCCCTGTGCCCGGTTTCTAGCCCGGGACCTGGCCCCTGGCAGATGCTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34044940 131 + 185818997 CCTGAGGCATCCCTCCGTCAGGTGCTGAGAACCTGCGTCT-CTCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCAGGATGAGAGCGGGGC-CTGGGCTCCCAGCTCT-GGTTTCTAGCCTGGGACCTGGCCCCT------------ i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428627 131 - 9440265 CCTGAGGCATACCTCCGTCAGGTGCTGAGAACCTGCGTCT-CTCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCAGGATGAGAGCGGGGC-CTGGGCTCCCAGCTCT-GGTTTCTAGCCTGGGACCTGGCCCCT------------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018540 131 - 21915920 CCTGAGGCATCCCTCCGTCAGGTGCTGAGAACCTGCGTCT-CTCACCTGCTTCTCCCAAGGCTGGAGCTTCCCCAGGATGAGAGCGGGGC-CTGGGCTCCCAGCGCC-GGTTTCTAGCCTGGGACCTGGCCCCT------------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150777 131 - 21531802 CCTGAGGCATCCTTCGGTCAGGAGTTGAGAACCTGCATCT-CCCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCAGGACGAGAGCGGGGC-CTGAGCTCCCAGCGCC-GGTCTGTAGCCCAGGACCTGGCCCCT------------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185439 131 - 2515279 CTTGAGGCATCCCTCCGTCAGGTGCTGAGAACCTGCGTCT-CTCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCAGGATGAGAGCGGGGC-CTGGGCTCCCAGCGCC-TGTTTCTAGCCTGGGACCTGGCCCCT------------ i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 342927 131 + 6586416 CCTGAGGCGTCCCTCCGTCAGGTGCTGAGAACCTGAGTCT-CTCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCAGGACGAGAGCGGGGC-CTGAGCTCCCAGCGCC-GGTTTCTAGCCCAGGACCCGGCCCCT------------ i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 386818 139 - 2409723 CGAGAGGCATCGCCCCATCAGGTACTTATAACCTCCATCT-CTCACCTGCTTTTCCTGAGGCTGGAGCTTCCCCAGGACAAGAGCGGGGC------CTCCCAGTGCCGGGTTCCTAGCCCAGGACCTGGCCCCTGGCAGATGCTGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 548103 139 - 2125214 CGTGAGGCATCGCCCCGTCAGGTACTTACAACCTGCATCT-CTCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCAGGACACGAGCAGGGC------CTTCCAGTGCCAGGTTCCTAGCCCAGGACCTGGTCCCTGGCAGATGCTGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 141217 138 + 376347 CACGAGGCATCGCCCCATCAGGTACTTATAACCTGCATCT-CTCACCTGCTTTTCCCAAGGCTGGAGCTTCCCCAGGACAAGAGCGGGGC------CTCCCAGTG-TGGGCTCCTAGCCCAGGACCTGGCCCCTGGCAGATGCTGG i aotNan1.NW_018514293v1 C 0 I 315 s otoGar3.GL873611 2276871 127 - 8137123 -CTTGGGCTTCACAGCCTCACTTACTATAACTCTGCCTCTGCTGGTCCACTTTTCCTGGGGTGGAAGATTCCCCAGG-CAAGCACAGAGCACAGGATTCTTGGAGGGCAAACTCCCACCCAAGGGCTGG----------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I e calJac3.chrUn_GL286444 73163 1245 + 138751 I a score=134482.000000 s hg38.chr7_KI270899v1_alt 176654 25 + 190869 GCATAGGCTTATGAGAGGACTGAAG s panTro5.chr7_NW_015973580v1_random 51980 25 - 83720 GCATAGGCTTATGAGAGGACTGAAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566549 25 + 162613886 GCATAGGCTTATGAGAGGACTGAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 137988 25 - 432965 GCATAGGCTTATGAGAGGACTGAAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197847 25 + 85365473 CCATAGGCTTATGAGAGGGCTGAAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34045071 20 + 185818997 -----GGCTTGTGAGAGGACTGAAG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428758 20 - 9440265 -----GGCTTGTGAGAGGACTGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018671 20 - 21915920 -----GGCTTGTGAGAGGACTGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150908 20 - 21531802 -----GGCTTGTGAGAGGACTGAAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185570 20 - 2515279 -----GGCTTGTGAGAGGACTGAAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 343058 20 + 6586416 -----GGCTTGTGAGAGGACTGAAG i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 386957 25 - 2409723 ACCTAGGCTTCGGAAGGGACTGAAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 548242 25 - 2125214 ACCTAGGCTTAGGAAGGGACTGAAG i cebCap1.NW_016107703v1 C 0 I 327 s otoGar3.GL873611 2276998 24 - 8137123 ATGTGCACTCA-GGGAGGACTGAAC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 141355 315 + 376347 I e calJac3.chrUn_GL286444 73163 1245 + 138751 I a score=290319.000000 s hg38.chr7_KI270899v1_alt 176679 57 + 190869 TGGCTGTGTCTCCACGCAGCCGACAGCTTCA-CGAGAGAGAAGGGGAGGTCAAGG-CCA s panTro5.chr7_NW_015973580v1_random 52005 57 - 83720 TGGCTGTGTCTCCACGCAGCCGACAGCTTCA-CGAGAGAGAAGGGGAGGTCAAGG-CCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566574 57 + 162613886 TGGCTGTGTCTCCACGCAGCCGACAGCTTCA-CGAGAGAGAAGGGGAGGTCAAGG-CCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 138013 57 - 432965 TGGCTGTGTCTCCACGAAGCCGACAGCTTCA-CGAGAGAGAAGGGGAGGTCAAGG-CCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197872 58 + 85365473 TGGCTGTGTCTCCACGCAGCCGACAGCTTCA-CGAGACGGAAGGGGAGGTCAGGGCCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34045091 57 + 185818997 TGGCTGTGTCTCCACACAGCTGACAGCTTCA-CGAGACAGAAGGGGAGGTCAGGG-CCA i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428778 57 - 9440265 TGGCTGTGTCTCCACACAGCTGACAGCTTCA-CGAGACAGAAGGGGAGGTCAGGG-CCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018691 57 - 21915920 TGGCTGTGTCTCCACACAGCTGACAGCTTCA-CGAGACAGAAGGGGAGGTCAGGG-CCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150928 57 - 21531802 TGACTGTGTCTCCACACAGCTGACAGCTTCA-CAAGACAGAAGGAGAGGTCAGAG-CCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185590 57 - 2515279 TGGCTGTGTCTCCACACAGCTGACAGCTTCA-CAAGACAGAAGGGGAGGTCAGGG-CCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 343078 57 + 6586416 TGGCTGTGTCTCCACACAGCTGACAGCTTCA-CGAGACAGATGGGGAGGTCAGGG-CCA i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 386982 42 - 2409723 -------------AC-CGGCCAACAGCTTCA-CAGGATAGAATCGGGGG-CAGCG-CCA i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2277022 56 - 8137123 --TGTGTGCCCACACTCAGCCGATCCCTGCATTTAGAAGGAAGGAGAACAAGAAG-CCA i otoGar3.GL873611 C 0 I 310 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 141355 315 + 376347 I e cebCap1.NW_016107703v1 548267 327 - 2125214 I e calJac3.chrUn_GL286444 73163 1245 + 138751 I a score=226985.000000 s hg38.chr7_KI270899v1_alt 176736 50 + 190869 AGATCCAGTGACAAGAGGAC-CAGAGCCCCATGA-CTAGCAGG-Ccacagatg s panTro5.chr7_NW_015973580v1_random 52062 48 - 83720 AGACCCAGTGACAAGAGGACTCAGAGCCCCATGG-T---CTGG-Ccacagacg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566631 48 + 162613886 AGACCCAGTGACAAGAGGACTCAGAGCCCCATGG-T---CTGG-Ccacagacg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 138070 48 - 432965 AGACCCAGTGACAAGAGGACTCAGAGCCCCATGG-T---CTGG-Ccacagacg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197930 49 + 85365473 AGCCCCAGTGACGAGAGGGCTCAGAGCCCCATGA-C---CTGGCCCACAGACG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34045148 48 + 185818997 AGCCCCAGTGATGAGAAGACTCAGAACCCCATGA-C---CCGG-CCACAGACG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428835 48 - 9440265 AGCCCCAGTGATGAGAGGACTCAGAACCCCATGA-C---CCGG-CCACAGACG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018748 49 - 21915920 AGCCCCAGTGATGAGAGGACTCAGAACCCCACGACC---CCGG-CCACAGACG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 150985 48 - 21531802 AGCCCCACTGGCGAGAGGACTCAGAGCCCCGTGA-C---CCGG-CCACAGACG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185647 48 - 2515279 AGCCCCAGTGATGAGAGGACTCAGAACCCCATGA-C---CCGG-Ccacagacg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 343135 48 + 6586416 AGCCCCAGTGACGAGAAGACTCAGAGCCCCATGA-C---CCGG-CCACAGACG i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 387024 46 - 2409723 AGCCCCAGAGACGAAAGGACT--GAGCCCCACGA-C---CTGG-TCACAGACG i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2277078 310 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 141355 315 + 376347 I e cebCap1.NW_016107703v1 548267 327 - 2125214 I e calJac3.chrUn_GL286444 73163 1245 + 138751 I a score=81265.000000 s hg38.chr7_KI270899v1_alt 176786 13 + 190869 gcagctagtttag s panTro5.chr7_NW_015973580v1_random 52110 13 - 83720 gcagctagtttag i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566679 13 + 162613886 gcagctagtttag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 138118 13 - 432965 gcagctagtttag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197979 13 + 85365473 GCTGctggtttag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34045196 13 + 185818997 GCAGCTGGCTTAG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428883 13 - 9440265 GCAGCTGGCttag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018797 13 - 21915920 GCAGCTGGCttag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 151033 13 - 21531802 GCAGCTGGCTTAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185695 13 - 2515279 gcagctggcttag i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 343183 13 + 6586416 GCAGCTGGCttag i colAng1.NW_012117710v1 C 0 C 0 s saiBol1.JH378296 387070 13 - 2409723 GCAGCTGATTTAG i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2277388 13 - 8137123 GCAGCCAGTTTAG i otoGar3.GL873611 I 310 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 141355 315 + 376347 I e cebCap1.NW_016107703v1 548267 327 - 2125214 I e calJac3.chrUn_GL286444 73163 1245 + 138751 I a score=916379.000000 s hg38.chr7_KI270899v1_alt 176799 185 + 190869 tcctcacaacaaggtgagagccagcagctccctcccacagcaggaaact-gagctctgagagattccc-------tgacatgcccagtgccgtctggctggtgaggga---caagccggacctagcccccatgtgctggctccaag---cccaccctcagcccagcccctcCCACAGCGCTGGCCTTTC--------------CTTCCCACAC s panTro5.chr7_NW_015973580v1_random 52123 185 - 83720 tcctcatgacaaggtgagagccagcagctccctcccacagcaggaaact-gagctctgagagattccc-------tgacatgcccagtgccatctggctggtgaggga---caagccggacctagcccccatgtgctggctccaag---cccaccctcagcccagcccctcCCACAGCGCTGGCCTTTC--------------CCTCCCACAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566692 185 + 162613886 tcctcacgacaaggtgagagccagcagctccctcccacagcaggaaact-gagctctgagagattccc-------tgacatgcccagtgccatctggctggtgaggga---caagccggacctagcccccatgtgctggctccaag---cccaccctcagcccagcccctcCCACAGCGCTGGCCTTTC--------------CCTCCCACAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 138131 182 - 432965 tcctcacgacaaagtgagagccagcagctccctcccacagtaggaaact-gagctctgagagattccc-------tgacatgcccagtgccgtctggctgctga-gga---caagccagacctag-ccccatgtgctggctccaag---ccc-ccctcagcccagcccctcccacagcgctggcctttc--------------cctcCCACAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 197992 185 + 85365473 tcctcaccaccaggtgagagccagccgctccctcccgcagcaggaaact-gagctctgagagattccc-------tgacgtgcccagtgccgtctggctggtgaggga---caagccggacctagcccccatgtgctggctccaag---tccaccctcagccccacccctcccacagcgctggcctgtc--------------cctcCCACAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34045209 183 + 185818997 TCCTCACGACAAGGTGAGAGCCAACAGCTCCCTCCCGCCGTGggaaacc--agctctgagagattctc-------cgacatgcccagggccgtccggctggcgaggga---caagccagacctaacccctgtgtgctggctccaag---cccaCCCTCAGCCT-GTCCCGCCCCCAGCGCTGGCCTGTC--------------CCTCCCACAG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4428896 183 - 9440265 tcctcacgacaaggtgagagccaacagctccctcccgccgtgggaaacc--agctctgagagattccc-------cgacatgcccagggccgtccggctggcgaggga---caagccagacctaacccctgtgtgctggctccaag---cccaccctcAGCCT-GTCCCTCTCCCAGCGCTGGCCTGTC--------------CCTCCCACAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018810 183 - 21915920 tcctcacgacaaggtgagagccaacagctccctcccgccgtgggaaacc--agctctgagagattccc-------cgacatgcccagggccgtccggctggcgaggga---caagccagacctaacccctgtgtgctggctccaag---cccaccctcAGCCT-GTCCCTCCCCCAGCGCTGGCCTGTC--------------CCTCCCACAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 151046 183 - 21531802 TCCTCACGACATGGTGAGAGCCGACAGCTCCCTCCCGCCGTGggaaacc--agctctgagagattccc-------tgacacgcccagggccgtccggctggcgaggga---caagccagacctaacccctgtgtgctggctccaag---cccaCCCTCAGCCC-GTCCCTCCCCCAGCGCCGGCCTGTG--------------CCTCCCACAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185708 183 - 2515279 tcctcacgacaaggtgagagccaacagctccctcccaccgtgggaaacc--agctctgagagattccc-------cgacatgcccagggccgtccggctggcgaggga---caagccagacctaacccctgtgtgctggctccaag---cccaccctcAGCCT-GTCCCTCCCCCAGCGCTGGCCTGTC--------------CCTCCCACAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 343196 183 + 6586416 tcctcacgacaaggtgagagccaacagctccctcccgccgtgggaaacc--agctctgagagattccc-------cgacatgcccagggccgtctggctggcgaggga---caagccagacctaacccctgtgtgctggctccaag---cccaccctcAGCCC-GTCCCTCCCCCAGCGCTGGCCTGTC--------------CCTCCCACAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 74408 202 + 138751 TCCTCAGGACAAGCTGAGAGCCAGCAGCTCCCTCCCACAGCAGAAATC---AGCTCCGAGAGACTCTCACACACTCCACATGCCCAATGCCATCTGGCTGGTGAAGGA---CAAGCCAGACCTAA-ACCTAAAAGTTGGCCCCAAG---CCCGCCTTTAGCCCAGCTCCTTGTATGGCACTGGTCTGTTGGAGGTCTCAGCACCCTCTCACA- i calJac3.chrUn_GL286444 I 1245 C 0 s saiBol1.JH378296 387083 118 - 2409723 TCCTCAGGACAAGCTGAGAGCCAGCAGCTCCTTCC-----------------------------------------------------------------------------------------A-ACTCGCAAGCTGGCCTCTAG---CCCACCTTCAGCCCAGCCCCTTCTACGGCACTGGCCTGTC-GCGGTCTCAGCATCCTCTCACC- i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2277401 152 - 8137123 CCCTCACAACAAG------------------------------AAAACTTTGGCTCAGGGAGATGTAG-------TTACGTG-CTAGTGGCACTTGGCTGGGGAAGGGCTTCAAGCCCTTTCTGCCCC------ACTGGGCACAGGACTTCCTCCCTTGGGCT-TCCCTGTCCAGGGTCTCAGCCCCTC--------------CTCACTCC-- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 141355 315 + 376347 I e cebCap1.NW_016107703v1 548267 327 - 2125214 I a score=22691.000000 s hg38.chr7_KI270899v1_alt 176984 5 + 190869 CCCAA s panTro5.chr7_NW_015973580v1_random 52308 5 - 83720 CCCAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566877 5 + 162613886 CCCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 138313 5 - 432965 CCCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 198177 5 + 85365473 CCCAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34045392 5 + 185818997 CCCTC i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4429079 5 - 9440265 CCCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018993 5 - 21915920 CCCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 151229 5 - 21531802 GCCTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185891 5 - 2515279 CCCTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 343379 5 + 6586416 CCCTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 74610 5 + 138751 CCCAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 387201 5 - 2409723 TACAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 548594 5 - 2125214 CCCAC i cebCap1.NW_016107703v1 I 327 C 0 s otoGar3.GL873611 2277553 5 - 8137123 CCCAC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I e aotNan1.NW_018514293v1 141355 315 + 376347 I a score=1549222.000000 s hg38.chr7_KI270899v1_alt 176989 202 + 190869 CTGCTGCCTCCAGCA-CG--GGGACC-CCCAGGGAAGGGCAGGACCCTGGGAAGCAGATGTGGGCTTCTTGTTCCTAAGTGTCCAGAATTCCAAGATGGCTTAAACCCAGCATAGGGCTGAATGGGTGAGGCTGGCGAAGAGGTCAAGTTTCTCTGT--AAAAATAGTGACCACAATAATAGCAACGTGTGCTTTGTAGCAAAGACT-C s panTro5.chr7_NW_015973580v1_random 52313 202 - 83720 CTGCTGCCTCCAGCA-CG--GGGACC-CCCAGGGAAGGGCAGGACCCCGGGAAGCAGATGTGGGCTTCTTGTTCCTAAGTGTCCAGAATTCCAAGATGGCTTAAACCCAGCATAGGGCTGAGTGGGTGAGGCTGGCGAAGAGGTCAagtttctctgt--aaaaatagtgaccacaataatagcaacgtgtgctttgtagcaaagact-c i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 566882 202 + 162613886 CTGCTGCCTCCAGCA-CG--GGGACC-CCCAGGGAAGGGCAGGACCCCGGGAAGCAGATGTGGGCTTCTTGTTCCTAAGTGTCCAGAATTCCAAGATAGCTTAAACCCAGCATAGGGCTGAGTGGGTGAGGCTGGCGAAGAGGTCAagtttctctgt--aaaaatagtgaccacaataatagcaacgtgtgctttgtagcaaagact-c i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 138318 200 - 432965 CTGCTGCCTCCAGCA-CG--GGGACC-CCCA-GGAAGGGCAGGACCCCGGGAAGCAGATGTGGGCTTCTTGTTCCTAAGTGTCCAGAATTCCAAGATGGCTTAAACCCAGCATACGGCTGAGTGGGTGAGGCTGGCGAAGAGGTCAAGTTTCTCTGT---AAAATAGTGACCACAATGATAGCAACGTGTGCTTTGTAGCAAAGACT-C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 198182 201 + 85365473 CTGCTGCCTCCAGCACCA--GGGAGC-CCCAGGGAAGGGCAGGACCCCGGGAAGCAGATGTGGGCTTCTTGTTCCTAAGTGTCCAGAATTCCA--ACAACTTAGACCCAGCATAGGGCTGCGTGGGTGAGGCTGGTGAAGAGGTCAAGTTTCTCTGT--AAAAATAGTGACCACAATAATAGCAACGTGTGCTTTGTAGCAAAGACT-C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34045397 190 + 185818997 CTGCTGCCTCCAGCA-CG--GGGAGC-CCCAGGGAAGGGCAGGAGCCCGGGAGGCAGATGTGGGCATCTTGTTCCTAAGTGTCCAGAATTCCAAGACGGCT-----------TAGGGCTGAGTGGGTGAGGCTGGTGGAAAGGTCAAGTTTCTCTAT--AAAAATAGTGACCACAATAATAGCAACATATGCTTTGTAGCAAAGACT-- i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4429084 190 - 9440265 CTGCTGCCTCCAGCA-CA--GGGAGC-CCCAGGGAAGGGCAGGAGCCCGGGAGGCAGATGTGGGCATCTTGTTCCTAAGTGTCCAGAATTCCAAGACGGCT-----------TAGGGCTGAGTGGGTGAGGCTGGTGGAAAGGTCAAGTTTCTCTAT--AAAAATAGTGACCACAATAATAGCAACATATGCTTTGTAGCAAAGACT-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17018998 190 - 21915920 CTGCTGCCTCCAGCA-CG--GGGAGC-CCCAGGGAAGGGCAGGAGCCCGGGAGGCAGATGTGGGCATCTTGTTCCTAAGTGTCCAGAATTCCAAGACGGCT-----------TAGGGCTGAGTGGGTGAGGCTGGTGGAAAGGTCAAGTTTCTCTAT--AAAAATAGTGACCACAATAATAGCAACATATGCTTTGTAGCAAAGACT-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 151234 190 - 21531802 CTGCTGCCTCCAGCA-CG--GGCAGC-CCCAGGGAAGGGCAGGAGCCTGGGAGACAGCTGTGGGCATCTTGTTCCTAAGTGTCCAGAATTCCCAGACGGCT-----------TAGGGCTGAGTGGGAGAGGCTGGTGGAAAGGTCAAGTTTCTCTGT--AAAAATAGTGACCACGATAATAGCAACCTGTGCTTTGTAGCAAAGACT-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 185896 190 - 2515279 CTGCTGCCTCCAGCA-CG--GGGAGC-CCCAGGGAAGGGCAGGAGCCCGGGAGGCAGATGTGGGCATCTTGTTCCTAAGTGTCCAGAATTCCAAGACGGCT-----------TAGGGCTGAGTGGGTGAGGCTGGTGGAAAGGTCAAGTTTCTCTAT--AAAAATAGTGACCACAATAATAGCAACATATACTTTGTAGCGAAGACT-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 343384 191 + 6586416 CTGCTGCCTCCAGCA-CG--GGGAGC-CCAAGGGAAGGGCAGGAGCCTGGGAAGCAGATGTGGGTATCTTGTTCCTAAGTGTCCAGAATTCCAAGACGGCT-----------TAGGGCTGAGTGGGTGAGGCTGGTGGAAAGGTCAAGTTTCTCGGT--AAAAATAGCGACCACAGTAACAGCAACATATGCTTTGTAGCAAAGACTC- i colAng1.NW_012117710v1 C 0 I 1475 s calJac3.chrUn_GL286444 74615 197 + 138751 CTGTTGCCTCTAGCA-TG--GGGAGC-CCCAGGGAAGGGCAGG-CCCCAAGAAGCAGATGTTGGCGTCATGTT-CTAAGTGTCCAGAATTCCAAGACAGCTTAAATCCAGCATAGGGCTGGGTGGGTGAGGCTGGTG---AGGTCAAGCTTCCCTGT--AAAAATAGCAACCACAATAATAGCAACACGTGCTTTGTAGCAAAGACT-C i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 387206 196 - 2409723 CTGTTGCCTCCAGCA-TG--GGGAGC-CCCAGGGAAGCGCAGG-CTTCAGGAAGCAGATGTGGGCGTCATGTTCCTAAGTGTCCACAATTCCAAGACAGCTTAAATCCGGCATAGGACTGGGTGGGTGAGGCTGGTG---AGGTCAAGCTTCCCTGT--AAAAATAGCGACCACGATAATAGCAATATGTGCTTTGTAGC--AGACT-C i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 548599 198 - 2125214 CTGTTGCCTCCAGCA-TG--GGGAGC-GCCAGGGAAGGGCAGG-CCCCAGGAAGCAGATGTGGGCGTCATGTTCCTAAGTGTCCAGAATTCCAAGACAGCTTAAATCCGGCATAGGGCTGGGTGGGTGAGGCTGGTG---AGGTCAAGCTTCCCTGT--AAAAATAGTGACCACAATAATAGCAACATGTGCTTTGTAGCAAAGATT-C i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 141670 199 + 376347 CTGTTGCCTCCAGCA-CG--GGAAGCTCCCAGGGAAGGGCGGG-CCCCGGGAAGCAGATGTGGGTGTCATGTTCCTAAGTGTCCAGAATTCCAAGACAGCTTAAATCCGGCATAGGGCTGGATGGGTGAGGCTGGtg---aggtcaagcttccctgt--aaaaatagcgaccacaataatagcaacatgtgctttgtagcaaagact-c i aotNan1.NW_018514293v1 I 315 C 0 s otoGar3.GL873611 2277558 152 - 8137123 CTGCTGCCTCCAGTC-TGTTGGGAGA-GCCTAGACTGCGT--------------CAGCTG-------------------------------------AGCTCAGACCAAGCACAGAGTC---TGAAGCTGACTGGCAAAGTAGTCAAAATTTTCTTATAAAAAATAGCAACAGTAATAACAATGATGCCCACTTTGTAACAATGATG-C i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I a score=169023.000000 s hg38.chr7_KI270899v1_alt 177191 31 + 190869 ACTG-AGACTCTGCGTGCAAAGTGCTAAGGCC s panTro5.chr7_NW_015973580v1_random 52515 31 - 83720 actg-agactctgcgtgcaaagtgctgagGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567084 31 + 162613886 actg-agactctgcgtgcaaagtgctgagGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 138518 32 - 432965 ACCGAAGACTCTGTGTGCAAAGTGCTGAGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 198383 31 + 85365473 ACTG-AGGCCCTGTGTGCAAAGTGCTGAGGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34045587 24 + 185818997 --------CCCTGCGTGCAAACCCCTGAGGCT i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4429274 24 - 9440265 --------CCCTGCGTGCAAACCCCTGAGGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17019188 24 - 21915920 --------CCCTGCGTGCAAACCCCTGAGGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 151424 24 - 21531802 --------CCCTGCGTGCAAACCCCTGAGGCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 186086 24 - 2515279 --------CTCTGCGTGCAAACCCCTGAGGCT i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 74812 31 + 138751 ATTG-AGACCTTGCGTGCAAAGCGCTGAGGCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 387402 31 - 2409723 ACTG-AGACCTTGCGTGCAAAGTGCTGAGGCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 548797 31 - 2125214 ACTG-AGACCCTGTGTGCAAAGTGCTGAGGCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 141869 31 + 376347 actg-agaccttgcgtgcaaagcgctgagGCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2277710 30 - 8137123 ACTGAAAGGTCT--GTGCAAAGTGCTGAGGCC i otoGar3.GL873611 C 0 I 3929 e colAng1.NW_012117710v1 343575 1475 + 6586416 I e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I a score=2435074.000000 s hg38.chr7_KI270899v1_alt 177222 401 + 190869 GGCCCAGCTTGCGGCCACGCCAAGTGCCGTCTGCTGTGGGGCCAGCTCCTCCCTCCTCCTCCAGTTCCTCGGGCTGTCTGGTCTGGGGATGTGGCTT---------TGGGGCTCGGTGGCCTGCAGCCCATCCC-----------------------------------------------------------------CTTGCCTTCAAGGGCCCCTTAGGGCACAGAGCACCCCGTCAGGTAGCATCCCCAGGACGCGGGGCCGGCTGAATCCCTGGGTGCTGTG------------------------------------------------------------------------------------------------------------CCCTCTGCTCTGCCTTCTCCGGGGCCCCCGGCAGGATTGGCCTCCCCGACTCCGGCAGGAACTTGGTGCGGCTGTCCCAGCCCTGGGCATCTTCTCCCTCAGGCTGCGGCCTCACAGGGCCCACGAGGGTCAGAAAGCAGAGGTC-TGGCTGttttgatttttggg---------tttttattgagacagggtccagc s panTro5.chr7_NW_015973580v1_random 52546 414 - 83720 GGCCCAGCTTGTGGCCACGCCAAGTGCCGTCTGCTGTGTGGCCAGCTCCTCCCTCCTCCTCCAGTTCCTCGGGCTGTCTGGTCTGGGGATGTGGCTT---------TGGGGCTCGGTGGCCTGCAGCCCATCCCT----------------------------------------------------GCAGCCCATCCCCTTGCCTTCAAGGGCCCCTTAGGGCACAGAGCGCCCTGTCAGGTAGCATCCCCAGGACGCGGGGCCGGCTGTATCCCCGGGTGCTGTG------------------------------------------------------------------------------------------------------------CCCTCTGCTCTGCCTTCTCCGGGGCCCCCGGCAGGATGGCCCTCCCCGACTCCGGCAGGAACTTGGTGCGGCTGTCCCAGCCCTGGGCATCTTCTCCCTCAGGCTGCGGCCTCACAGGGCCCACGAGGGTCAGAAAGCAGAGGTC-TGGCTGttttgatttttggg---------tttttattgagacagggtccagc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567115 414 + 162613886 GGCCCAGCTTGTGGCCACGCCAAGTGCCATCTGCTGTGTGGCCAGCTCCTCCCTCCTCCTCCAGTTCCTCGGGCTGTCTGGTCTGGGGATGTGGCTT---------TGGGGCTCGGTGGCCTGCAGCCCATCCCT----------------------------------------------------GCAGCCCATCCCCTTGCCTTCAAGGGCCCCTTAGGGCACAGAGCGCCCTGTCAGGTAGCATCCCCAGGACGCGGGGCCGGCTGTATCCCCGGGTGCTGTG------------------------------------------------------------------------------------------------------------CCCTCTGCTCTGCCTTCTCCGGGGCCCCCGGCAGGATCGCCCTCCCCGACTCCGGCAGGAACTTGGTGTGGCTGTCCCAGCCCTGGGCATCTTCTCCCTCAGGCTGCGGCCTCACAGGGCCCACGAGGGTCAGAAAGCAGAGGTC-TGGCTGttttgatttttggg---------tttttattgagacagggtccagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 138550 410 - 432965 GGCCCAGCTTGCGGCCACGCCAAGTGCCGTCTGCTGTGGGGCCAActcct-cctcctcctccagttcctcGGGCTGTCTGGTCTGGGGATGTGGCTT---------TGGGGCTCGGTGGcctgcagcccatcct-----------------------------------------------------gcagcccatccCCTTGCCTTCAAGGG-CCCTTAGGGCACAGAGCGCCCCGTCAGGTAGCATCCCCAGGACGCGGGGCCGGCTGAATCCCCGGGTGCTGTG------------------------------------------------------------------------------------------------------------CCCTCTGCTCTG-CTTCTCCGGGGCCCCCTGCAGGATCGGCCTCCCCGACTCCGGCAGGAACTTGGTGCGGCTGTCCCAGCCCTGGGCATCTTCTCCCTCAGGCTGCGGCCTCACAGGGCCCACGAGGGTCAGAAAGCAGAGGTC-TGGCTGttttgatttttggg---------tttttattgagacagggtccagc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 198414 471 + 85365473 GGCCCAGCTTGCGGCCATGCCAAGTGCCGTCTGCTGCAGGGCCAGctcctccctcctcctccagctcctcGGGCTGTCTGGTCTGGGGATGTGGCTT---------TGGGGCTTGGTGGCCTGTAGCCCATCCCTGCGGCCCATCCCCGCGGCCTATCCCCGAGGCCCATCCCCGCGGCCCATCCCCGCGGCCCATCTCCTTGCCTTCAAGTGCCCCTTAGGGCACAGAGCGCCCCATTGAGTAGCATCCCCAGGACGCGGGGCCGGCTGTATCCCTGGGTGCTGTG------------------------------------------------------------------------------------------------------------CCCTCTGCTCTGCCTTCTCTGGGGCCCCCGGCAGGATCGGCCTCCCCAACTCCGGCAGGAACTTGGTGCAGCTGTCCCAGCCCCGGGCATCTTCTCCCTCAGGCTGCGGCCTCACAGGGCCCACAAGGGTCAGAAAGCAGAGGTC-TGGCTGttttgttttttggg----tttttttttttttGAGACAGGGTCCAGC i nomLeu3.chr20 C 0 I 2987 s rheMac8.chr3 34045611 414 + 185818997 GGCCCAGC-TGCAGCCACGCCAGGTGCCGTCTGCTGTGGGGCCAGctcctccctcctcctccagctcctcGGGCTGTCTGGTCTGGGGCTGTGGCTTTGGGGCCTCTGGGGCTCGGTGGCCTGCAGCCCATCCC-----------------------------------------------------------------CTTACCTTCAAGGGCCCCTTAGGGCACAGAGCGCCCCTTCGAGTAGCATCTCTGGGATGCAGGGCCAGCTGTGCCCCTGGGTGCTGCA------------------------------------------------------------------------------------------------------------CCCTCTGCTCTGCCTTCTCCAGTGCCCCGGTCAGGATCGG-CCCCCCGACTCCGGCAGGAGCTTGGTTTGGCTGTCCCAGCCCTGGGCATCTTCTCCCTCAGACCGTGGCCTTGCAGGGCCCATGAGGGTCAAAAAGCAGAGTTC-TGGCTGttttgttttttggg---ttttttttttttttgagacagggtccagc i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4429298 417 - 9440265 GGCCCAGC-TGCAGCCACACCAGGTGCCGTCTGCTGTGGGGCCAGctcctccctcctcctccagctcctcAGGCTGTCTGGTCTGGGGCTGTGGCTTTGGGGCCTCTGGGGCTCGGTGGCCTGCAGCCCATCCC-----------------------------------------------------------------CTTACCTTCAAGGGCCCCTTAGGGCACAGAGCGCCCCTCCGAGTAGCATCTCTGGGATGCAGGGCCGGCTGTGCCCCTGGGTGCTGCA------------------------------------------------------------------------------------------------------------CCCTCTGCTCTGCCTTCTCCAGCGCCCCGGTCAGGATCGG-CCCCCCAACTCCGGCAGGAGCTTGGTTTGGCTGTCCCAGCCCTGGGCATCTTCTCCCTCAGACCGTGGCCTTGCAGGGCCCATGAGGGTCAAAAAGCAGAGTTC-TGGCTGttttgttttttgggtttttttttttttttttgagacagggtccagc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17019212 412 - 21915920 GGCCCAGC-TGCGGCCACGCCAGGTGCCGTCTGCTGTGGGGCCAGCTCCTCCCTCCTCTTCCAGCTCCTCGGGCTGTCTGGTCTGGGGCTGTGGCTTTGGGGCCTCTGGGGCTTGGTGGCCTGCAGCCCATCCC-----------------------------------------------------------------CTTACCTTCAAGGGCCCCTTAGGGCACAGAGCGCCCCTTCGAGTAGCATCTCTGGGATGCAGGGCCGGCTGTGCCCCTGGGTGCTGCG------------------------------------------------------------------------------------------------------------CCCTCTGCTCTGCCTTCTCCAGCGCCCCGGTCAGGATCGG-CCCCCCGACTCCGGCAGGAGCTTGGTTCGGCTGTCCCAGCCCTGGGCATCTTCTCCCTCAGACCGTGGCCTTGCAGGGCCCATGAGGGTCAAAAAGCAGAGTTC-TGGCTGttttgttttttggg-----ttttttttttttgagacagggtccagc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 151448 397 - 21531802 GGCCCAGC-TGCGGCCACGCCGGGTGCCGT---------------ctcctccctcctcctccagctcctcGGGCTGTCTGGTCTGGGGCTGTGGCTTTGGGGCCTCTGGGGCTCGGTGGCCTGCAG-CCACCCC-----------------------------------------------------------------CTTACCTTCAAGCGCCCCTTAGGGCACAGAGCGCCCCTTCGAGTAGCATCTCTGGGACGCGGGGCCGGCTGTGTCCCTGGGTGCTGCG------------------------------------------------------------------------------------------------------------CCCTCTGCTCTGCCTTCTCCAGGGCCCCGGTCAGGATCGGCCCCCCCGACTCCGGCAGGAACTTGGTTGGGCTGTCCCAGCCCTGGGCATCTTCTCCCTCAGACCGCGGCCTTGCAGGGCCCATGAGAGTCAGAAAGCAGAGCTC-TGGCTG-tttgttttttggg----ttttgttttttttgagacagggtccagc i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 186110 415 - 2515279 GGCCCAGC-TGCGGCCACGCCAGGTGCCGTCTGCTGTGGGGCCAGctcctccctcctcctccagctcctcGGGCTGTCTGGTCTGGGGCTGTGGCTTTGGGGCCTCTGGGGCTCGGTGGCCTGCAGCCCATCCC-----------------------------------------------------------------CTTACCTTCAAGGGCCCCTTAGGGCACAGAGCGCCCCTTCGAGTAGCATCTCTGGGATGCAGGGCCGGCTGTGCCCCTGGGTGCTGCG------------------------------------------------------------------------------------------------------------CCCTCTGCTCTGCCTTCTCCAGCGCCCCGGTCAGGATCGG-CCCCCCGACTCCGGCAGGAGCTTGGTTCAGCTGTCCCAGCCCTGGGCATCTTCTCCCTCAGACCGTGGCCTTGCAGGGCCCATGAGGGTCAAAAAGCAGAGTTC-TGGCTGttttgttttttggg--tttttttttttttttgagacagggtccagc i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 74843 456 + 138751 GGCC----------ATAGGCCAAGTGCCATCTGCTGTGGGGCCAGCTCCTCCCTCCTCC----AGTCCTCAGGGTGTCTGGTCTGGGGATGTGGCTT---------CGGAGCTCAGCAGCCTGAAGGCCATCCC-----------------------------------------------------------------ATTACCTTCAAGGGCCCCTTAGGGCACAGAGCGCCCCTTCCAGTAGCATCCCCAGAGCACATGGCCAGCTGTGTTCCTGGGTGCTGCGCCCTTGGCTCTGCCTTCTCTGGGGTCCCTGAGTGGCATCCCCAGGGGCTGTGTGTCCCTGGATGCTGTG---------------------------------------CCCTTGGCTCTGCCTTCTCTGGGGCCCCAGGCAGGATGTGCCTCCCCAACTCTGGCAGGAACTTGGTGTGGCTGTCCCAGTCCTGCACATCTTCTCTCTAAGGCTGCAGGCTTGCAGGACCCCTGAGGGTCAGGAAGCAGAGGCCCTTGCTGTTTGGttttttggg----------tttttttgagacagggtccaac i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 387433 449 - 2409723 AGCC----------ATAGGCCAAGTGCCATCTGCTGTGGGGCCAGCTCCTCCCCCCTCT----GGTTCTCAGGATGTCTGGTTTGGGGATGTGGCTG---------CGGGGCTCAGCAGCCTGCAGGCCATTCC-----------------------------------------------------------------GTTGTCTTCAAGTGCCCCTTAGGGCACAGAGCGCCCCTTCGAGTAGCATCCCCATAGCGCATGGCCAG-------CCTGGGTGCTGCGCCCTTGGCTCTGCCTTCTCTGGGGCCCCTGAGTGGCATCCCCAGGGGCTGTGTGTCCCTGGGTGCTGTG---------------------------------------CCCTCGGCTCTGCATTCTCTGGGGCCCCAGGCAGGATGTGCCTCCCCAACTCTGGCAGGAACTTGGTGTGGCCATCCCAGTCCTGTGAATCTTCTCCCTAAGGTTGCAGCCTCGCAGGACCCACGAGGGTCAAGAAGCAGAGGCCCTTGCTGTTTGGttttttggg----------ttttcttgagacaaggtccaac i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 548828 456 - 2125214 GGCC----------ATAGGCCAAGTTCCATCTGCTGTGGGGCCAGCTCCTCCCTCCTCC----AGTCCTCAGGGTGTCCGTTCTGGGGATGTGGCTG---------TGGGGCTCAGCAGCCTGCAGGCCATCCC-----------------------------------------------------------------ATTGTCTTAAAGGTCCCCTTAGGGCACAGAGCACCCCTTCAAGTAGCCTCCCCATAGCGCGTGGCCAGCTGTGATCCTGGGTGCTGTGCCCTCAGCTCT-----------------------GCCT----------------TCTCTGGGGCCCCTGAGTGGCATGCCCAGGGGCTGTGTGTCCCTGGGTGCTATGCCCTTGGCTCTGCCTTCCCTGGGGCCCCAGGCAGGATGTTCCTTCCCAACTCTGGCAGGAACTTGGTGTGGCCGTCCCAGTACTGCGCATCTTCTCCCTAAGGCTGCAGCCTTGCAGGACCCATGAGGGTCAAGAAGCAGAGGCCCTTGCTGTTTGGttttttggg----------ttttcttgaggcagggtccaac i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 141900 385 + 376347 GGCC----------ATAGGCCAAGTGCCGTCTGCTGTGGGGCCAGCTCCTCCCTCCTCC----AGTCCT-GGGGTGTCCGGTCTGGGGATGTGGCTG---------CGGGGCTCAGCAGCCTGCA-GCCATCCC-----------------------------------------------------------------GTCGTCTTCAAGGGCCCCTTAGGGCACTGAGCGCCCCTTCGAGTAGCATCCCCAGAGCGCGTGGCCAGCTGTGTTCCTGGGTGCTGCG------------------------------------------------------------------------------------------------------------CCCTCGGCTCTGCCTTCTCTGGGACCACAGGCAGGATGTGCCTCCCCAACTCTGGCAGGAACTTGGTGTGGCCGTCCCAGTCTTGCGCATCTTCTCCCTGAGGCTGCAGCCTTGCAGGACCCACGAGGGTCAAGAAGCAGAGGCCGTTGCTGTTTGGttttttggg----------ttttcttgagacagggtccaac i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 343575 1475 + 6586416 I e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I a score=2266864.000000 s hg38.chr7_KI270899v1_alt 177623 400 + 190869 tgttgctcgggccgggctgcggtggtgtgatcaccgctcactgcagcctcggtttcctgggctcaggagatcctcccacctcagccccct----gagaagctgggactacaggcacgcaccaccacgcccggctc------atgtttttattttttgtagagatggggtctccctctgtttcctcagctgctctcgaactcctagctcaatcagtccacccacctaggcctctgaaagtgctgggatgacaggtgtgagcccctgtgagcccagccCCTGGACTTTTTTTGGACTCTTTCATATAACTAATATGTAGGCCTGGAAGTCTGGTCATTGCTTTAAGTAGTTTCTTGGT-AGAGAACTAAGAATTCTATGTTTGAGAGGCCGTAGGGGCCACATCTGACCCACT s panTro5.chr7_NW_015973580v1_random 52960 400 - 83720 tgttgctcgggccggggtgcggtggtgtgatcaccgctcactgcagcctcggtttcctgggctcacgagatcctcccacctcagcccgct----gagaagctgggaccacaggcacgcaccaccacgcccggctc------atgtttttattttttgtagagatggggtctccctctgtttcctcagctgctctcgaactcctagctcaatcagtccgcccacctaggcctctgaaagtgctgggatgacaggtgtgagcctctgtgagcccagccCCTGGACTTTTTTTGGACTCTTTCATATAACTAATATGTAGGCCTGGAAGTCTGGTCATTGCTGTAAGTAGTTTCTTGGT-AGAGAACTAAGAATTCTATGTTTGAGGGGCCATAGGGGCCACATCTGACCCACT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567529 400 + 162613886 tgttgctcgggctggggtgcggtggtgtgatcaccgctcactgcagcctcggtttcctgggctcaggacatcctcccacctcagcccgct----gagaagctgggactacaggcacgcaccaccacgcccggctc------atgtttttattttttgtagagatggggtctccctctgtttcctcagctgctctcgaactcctagctcaatcagtccgcccacctaggcctctgaaagtgctgggatgacaggtgtgagcctctgtgagcccagccCCTGGACTTTTTTTGGACTCTTTCATATAACTAATATGTAGGCCTGGAAGTCTGGTCATTGCTGTAAGTAGTTTCTTGGT-AGAGAACTAAGAATTCTATGTTTGAGGGGCCATAGGGGCCACATCTGACCCACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 138960 398 - 432965 tgttgctc-ggccggggtgcggtggtgtgatcaccgctcactgcagcctcggtttcctgggctcaggagatcctcccacctcagccccct----gagaagctgggactacaggcacgcaccaccatgcccggctc------atgtttttattttttgtagagatggggtctccctctgtttcctcagctgctctcgaactcctagctcaatcagtccg-ccacctaggcctctgaaagtgctgggatgacaagtgtgagcccctgtgagcccagccCCTGGACTTTTTTTGGACTCTTTCATATAACTAATATGTAGGCCTGGAAGTCTGGTCATTGCTGTAAGTAGTTTCTTGGT-AGAGAACTAAGAATTCTATGTTTGAGGGGCCGTAGGGGCCACATCTGACCCACT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34046025 394 + 185818997 tgttgctcaggccggagtgtagtggtgtgatcgccactcactgcagcctggatttcctgggttcaggtgatcctccgacctcagccacct----gagtagctgggactacaagcatgcaccaccacacccggctg------atgtctgtgttttttgtagagatggggtctccctgtgttccctcagctgctctcgaa---ctagctcaatcaatccgcccacctaggcctctg-aagtgctgggatgacaggtgtgagcccccgtgagcccggccCCTGAACATTTTTTGGAATCTTTCATGTAACTAATCTGTAGGCCTAGAAGTTTGGTCATTGCTCTAAGTAGCTTCTC-GT-AGAGAACTAAgaattctgtgtttga-cgactgtagggaccacatctgacccact i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4429715 395 - 9440265 tgttgctcaggccggagtgtagtggtgtgatcgccactcactgcagcctggatttcctgggttcaggtgatcctccgacctcagccgcct----gagtagctgggactacaggcatgcaccaccacacccggctg------atgtctgtgttttttgtagagatggggtctccctgtgttccctcagctgctctcgaa---ctagctcaatcaatccgcccacctaggcctctg-aagtgctgggatgacaggtgtgagcccccgtgagcccggccCCTGAACATTTTTTGGAATCTTTCATGTAACTAATCTGTAGGCCTAGAAGTTTGGTCATTGCTCTAAGTAGCTTCTCGGT-AGAGAACTAAgaattctgtgtttga-cgactgtaggggccacatctgacccact i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17019624 395 - 21915920 tgttgctcaggccggagtgtagtggtgtgatcgccactcactgcagcctggatttcctgggttcaggtgatcctccgacctcagccgcct----gagtagctgggactacaggcatgcaccaccacacccgggtg------atgtctatgttttttgtagagatggggtctccctgtgttccctcagctgctctcgaa---ctagctcaatcaatccgtccacctaggcctctg-aagtgctgggacgacaggtgtgagcccccgtgagcccggccCCTGAACATTTTTTGGAATCTTTCATGTAACTAATCTGTAGGCCTAGAAGTTTGGTCATTGCTCTAAGTAGCTTCTCGGT-AGAGAACTAAGAATTCTGTGTTTGA-CAACTGTAGGGGCCACATCTGACCCACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 151845 398 - 21531802 tgttgctcaggccggagcatagtggtgtgatcaccactcactgcagcctggatttcctgggctcaggtgatcctccgacctcagccccct----gagtagctgggaccacaggcgtgcaccaccacacccggctg------atgtctgtgttttgtgtagagatggggtctccctgtgttccctccgctgctcttgaactgctagctcaatcaatccacccacctaggccgctg-aagtgctgggatgacaggcgtgagcccctgtgagcctggccCCTGGACTTTTTTTGGAATCTTTCATATAACTAATCTGTAGGCCTAGAAGTTTGGTCATTGCTGTAAGTAGCTTCTTGGT-AGAGAACTAAgaattctgtgtttga-tggctgtaggggccacatctgacccact i chlSab2.chr28 C 0 I 495 s manLeu1.NW_012101810v1 186525 395 - 2515279 tgttgctcaggctggagtgtagtggtgtgatcgccactcactgcagcctggatttcctggattcaggtgatcctccgacctcagccgcct----gagtagctgggactacaggcatgcaccaccacacccggctg------atgtctgtgttttttgtagagatggggtctccctgtgttccctcagctgctctcgaa---ctagctcaatcaatccgtccacctaggcctctg-aagtgctgggatgacaggtgtgagcccccgtgagcccggtcCCTGAACATTTTTTGGAATCTTTCATGTAACTAAACTGTAGGCCTAGAAGTTTGGTCATTGCTCTAAGTAGCTTCTCGGT-AGAGAACTAAGAATTCTGTGTTTGA-CAACTgtaggggccacatctgacccact i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 75299 396 + 138751 tgttgctaaggcc-aagtgcagtggtgtaatcaccactcactttggccttgatttcctgggctcaggtgatcctcccacctcagccctcc---tgagtagctaggacaacaggcatgaaccaccaagcccagcta------attttttt-ttttttgtagagatggggtctccctatgttgcctcagctgctcttgaactcctggctcaatcaatccgcccacctcggcctctgaaagtgctggggtgacaggcaggagccactgtgagcctggccCCTGGACGTGTTTTGAAATCATTTATGTAACTAATCTGTAGGCCTGGAAGTTTGGCCATCGCTGTAAGCAGCTTCTTGAT-AGAGACctaagaattc--tgtttga-gggctgtaggggacacatctgacccact i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 387882 403 - 2409723 tgttgctcaggcc-gagtgctatggtataatcaccactcactgcagccttgatttcctgggctcaggtgatcctcccacctcagcacccc---cgagtagctgggatgacaggcaggcacatccatgcccggctattttttatttttttattttttgtagagatagggtctccctatgttacctcagctgctcttgaactcctggctcaatcgatccgcccacctcggcctctgaaagtgctgggatgacaggcagaagccaccgtgagcccgaccCCTGGAGGTGTTTTGAAATCATTTCTGTAACTAATCTGTAGGCCGGGAAGTTTGGCCATCGCTGTAAGTAGCTTCTTGAT-AGAGACctaagaactc--tgtttga-gggccgtaggggccacatctgacccact i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 549284 396 - 2125214 tgctgctcaagct-gagtgccgtggtgtaatcaccactcactgcagccttgatttcctgggctcaggtgaccctcccacctcagcacccc--ttgagtagctgggacaacaggcatgtaccaccaagcccagcta-----tttttctttattttttgtagagatagggtctccttatgttgcctcagctgctcttgaactcctggctcaatcaatccgcccacctcggcctctgaaagtgttgggatgacaggtaggagccaccctgagcccggccCCTGGACATGTTTTGAAATCATTTATGTAGCTAATCTGTAGGCCTGGAAATTTGGCCATT----TAAGTAGCTTCTTGATAAGAGACctaagaactc--tgtttga-gggccatagaggccacatctgacccact i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 142285 401 + 376347 cgttgctcaggct-gagtgctgtggtgtaatcaccactcactgcagccttgacttcctgggctcaggtgatcctgccacctcagccccccccccgagtagctgggacgacagacaggaaccaccaagcccggcta-----attctttttattttttgtagagatagggtctccctatgttgcctcagctgctcttgaactcctggctcaatcaatccgcccaccttggcctctgaaagtgctgggatgacaggcaggagccaccgtgagcctggccCCTGGATGTGGTTTGAAATCATTTATGTAACTAACCTGTAGGCCTGGAAGTTTGGCCATCGCTGTAAGTAGCTTCTTGAT-AGAGACCTAAGAATTC--TGTCTGA-GGGCCGCAGGGGCCACATCTGACCCACT i aotNan1.NW_018514293v1 C 0 C 0 e colAng1.NW_012117710v1 343575 1475 + 6586416 I e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e macFas5.chr3 33595647 70765 + 192294377 I e nomLeu3.chr20 198885 2987 + 85365473 I a score=38163.000000 s hg38.chr7_KI270899v1_alt 178023 7 + 190869 TCCTTCT s panTro5.chr7_NW_015973580v1_random 53360 7 - 83720 TCCTTCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567929 7 + 162613886 TCCTTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139358 7 - 432965 TCCTTCT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34046419 7 + 185818997 cccttct i rheMac8.chr3 C 0 I 2089 s macNem1.NW_012019910v1 4430110 7 - 9440265 cccttct i macNem1.NW_012019910v1 C 0 I 2826 s cerAty1.NW_012002954v1 17020019 7 - 21915920 CCCTTCT i cerAty1.NW_012002954v1 C 0 I 2953 s manLeu1.NW_012101810v1 186920 7 - 2515279 cccttct i manLeu1.NW_012101810v1 C 0 I 3150 s calJac3.chrUn_GL286444 75695 7 + 138751 tccttct i calJac3.chrUn_GL286444 C 0 I 4352 s saiBol1.JH378296 388285 7 - 2409723 gccttct i saiBol1.JH378296 C 0 I 4410 s cebCap1.NW_016107703v1 549680 7 - 2125214 tccttct i cebCap1.NW_016107703v1 C 0 I 4515 s aotNan1.NW_018514293v1 142686 7 + 376347 TCCTTCT i aotNan1.NW_018514293v1 C 0 I 3976 e colAng1.NW_012117710v1 343575 1475 + 6586416 I e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e chlSab2.chr28 152243 495 - 21531802 I e macFas5.chr3 33595647 70765 + 192294377 I e nomLeu3.chr20 198885 2987 + 85365473 I a score=2238.000000 s hg38.chr7_KI270899v1_alt 178030 4 + 190869 AACT s panTro5.chr7_NW_015973580v1_random 53367 4 - 83720 AACT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567936 4 + 162613886 AACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139365 4 - 432965 AACT i gorGor5.CYUI01015914v1 C 0 C 0 e colAng1.NW_012117710v1 343575 1475 + 6586416 I e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e chlSab2.chr28 152243 495 - 21531802 I e manLeu1.NW_012101810v1 186927 3150 - 2515279 I e cerAty1.NW_012002954v1 17020026 2953 - 21915920 I e macNem1.NW_012019910v1 4430117 2826 - 9440265 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34046426 2089 + 185818997 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I e saiBol1.JH378296 388292 4410 - 2409723 I e cebCap1.NW_016107703v1 549687 4515 - 2125214 I e calJac3.chrUn_GL286444 75702 4352 + 138751 I e nomLeu3.chr20 198885 2987 + 85365473 I a score=1820.000000 s hg38.chr7_KI270899v1_alt 178034 2 + 190869 AA s panTro5.chr7_NW_015973580v1_random 53371 2 - 83720 AA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567940 2 + 162613886 AA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139369 2 - 432965 AA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 201872 2 + 85365473 AA i nomLeu3.chr20 I 2987 C 0 e colAng1.NW_012117710v1 343575 1475 + 6586416 I e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e chlSab2.chr28 152243 495 - 21531802 I e manLeu1.NW_012101810v1 186927 3150 - 2515279 I e cerAty1.NW_012002954v1 17020026 2953 - 21915920 I e macNem1.NW_012019910v1 4430117 2826 - 9440265 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34046426 2089 + 185818997 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I e saiBol1.JH378296 388292 4410 - 2409723 I e cebCap1.NW_016107703v1 549687 4515 - 2125214 I e calJac3.chrUn_GL286444 75702 4352 + 138751 I a score=5399.000000 s hg38.chr7_KI270899v1_alt 178036 6 + 190869 tttttg s panTro5.chr7_NW_015973580v1_random 53373 6 - 83720 tttttg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567942 6 + 162613886 tttttg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139371 6 - 432965 tttttg i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 201874 6 + 85365473 tttttt i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4432943 5 - 9440265 ttttt- i macNem1.NW_012019910v1 I 2826 C 0 s manLeu1.NW_012101810v1 190077 5 - 2515279 ttttt- i manLeu1.NW_012101810v1 I 3150 C 0 e colAng1.NW_012117710v1 343575 1475 + 6586416 I e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e chlSab2.chr28 152243 495 - 21531802 I e cerAty1.NW_012002954v1 17020026 2953 - 21915920 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34046426 2089 + 185818997 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I e saiBol1.JH378296 388292 4410 - 2409723 I e cebCap1.NW_016107703v1 549687 4515 - 2125214 I e calJac3.chrUn_GL286444 75702 4352 + 138751 I a score=53810.000000 s hg38.chr7_KI270899v1_alt 178042 19 + 190869 ttttttttgagacagagtt s panTro5.chr7_NW_015973580v1_random 53379 19 - 83720 ttttttttgagacagagtt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567948 18 + 162613886 -tttttttgagacagagtt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139377 19 - 432965 ttttttttgagacagagtt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 201880 19 + 85365473 ttttttttgagacggagtt i nomLeu3.chr20 C 0 C 0 s macNem1.NW_012019910v1 4432948 19 - 9440265 ttttttttgagatggagtc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17022979 19 - 21915920 ttttttttgagatggaatc i cerAty1.NW_012002954v1 I 2953 C 0 s manLeu1.NW_012101810v1 190082 19 - 2515279 ttttttttgagacagagtc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345050 19 + 6586416 ttttttttgagacagcgtc i colAng1.NW_012117710v1 I 1475 C 0 e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e chlSab2.chr28 152243 495 - 21531802 I e macFas5.chr3 33595647 70765 + 192294377 I e rheMac8.chr3 34046426 2089 + 185818997 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I e saiBol1.JH378296 388292 4410 - 2409723 I e cebCap1.NW_016107703v1 549687 4515 - 2125214 I e calJac3.chrUn_GL286444 75702 4352 + 138751 I a score=4682.000000 s hg38.chr7_KI270899v1_alt 178061 3 + 190869 tct s panTro5.chr7_NW_015973580v1_random 53398 3 - 83720 tct i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567966 3 + 162613886 tct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139396 3 - 432965 tgt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 201899 3 + 85365473 tcg i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33666412 3 + 192294377 tca i macFas5.chr3 I 70765 C 0 s macNem1.NW_012019910v1 4432967 3 - 9440265 tca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17022998 3 - 21915920 tca i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 190101 3 - 2515279 tct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345069 3 + 6586416 tcg i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e chlSab2.chr28 152243 495 - 21531802 I e rheMac8.chr3 34046426 2089 + 185818997 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I e saiBol1.JH378296 388292 4410 - 2409723 I e cebCap1.NW_016107703v1 549687 4515 - 2125214 I e calJac3.chrUn_GL286444 75702 4352 + 138751 I a score=29117.000000 s hg38.chr7_KI270899v1_alt 178064 8 + 190869 ctcttgtt s panTro5.chr7_NW_015973580v1_random 53401 8 - 83720 ctcttgtt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567969 8 + 162613886 ctcttgtt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139399 8 - 432965 ctcttgtt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 201902 8 + 85365473 ctcttgtc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34048515 8 + 185818997 ctcttgtc i rheMac8.chr3 I 2089 C 0 s macFas5.chr3 33666415 8 + 192294377 ctcttgtc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4432970 8 - 9440265 ctcttgtc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023001 8 - 21915920 ctcttgtc i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 190104 7 - 2515279 -ctctgtc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345072 7 + 6586416 -ctctgtc i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e chlSab2.chr28 152243 495 - 21531802 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I e saiBol1.JH378296 388292 4410 - 2409723 I e cebCap1.NW_016107703v1 549687 4515 - 2125214 I e calJac3.chrUn_GL286444 75702 4352 + 138751 I a score=1337589.000000 s hg38.chr7_KI270899v1_alt 178072 260 + 190869 gcccaggctggagtgcagtggcgtgatcttggctcactgcaacctccacctaccaggttcaagcgattctcccacctctgcctcccgagtagctgggattacaggcatgcgccaccatacccggctaa-tttttgtatttttagtagagacgggatttctccatgttggtcaggctggtctcgaactcctgacctctggtgatccacccgcctcggcctcccaaagcgctgggattacaggcgtgagccaccgcaccgggc s panTro5.chr7_NW_015973580v1_random 53409 260 - 83720 gcccaggctggagtgcaatggcgtgatcttggctcactgcaacctccacctcccaggttcaagcgattctcccgcctctgcctcccgagtagctgggattacaggcatgcgccaccatacccagctaa-tttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcctgacctctggtgatccacctgcctcggcctcccaaagcgctgggattacaggcgtgagccaccgcacccggc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 567977 260 + 162613886 gcccaggctggagtgcaatggcgtgatcttggctcactgcaacctccacctcccaggttcaagcgattctcccgcctctgcctcccgagtagctgggattacaggcatgcgccaccatacccggctaa-tttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcctgacctctggtgatccacctgcctcggcctcccaaagcgctgggattacaggcgtgagccaccgcacccggc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139407 258 - 432965 gcccaggctggagtgcaatggcgtgatcttggctcactgcaacctccacctaccaggttcaagcgattctcccgcctctgcctcccgagtagctgggattacaggcctgcgcca-catacccggctaa-tttttgta-ttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcctgacctctggtgatccacccacctcggcctcccaaagcgctgggattacaggcgtgagccaccacacccggc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 201910 261 + 85365473 gcccaggctggagtgcagtggcgtgatctcggctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattataggtgtgtgccgccgtgcctggctaattttttgtatttttagtagagacggggtttcaccatgttggccaggctgttctcaaactcctgacctcaggtgatccgcccgcctcagcctccccaagtgctgggattacaggcgtgagccaccgcgcccggc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34048523 259 + 185818997 acccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgcctccctggttcaagccattctcctgcctcagcctcccaagtagctgggattacaggtgcccgtcaccaagcctggctaattttttggaattttagtagagacagggtttcaccatgttggtcaggctggtctcagactcctgacctc--gtgatccgcccacctcggcctcctgaagtcctgggattacaggcgtgagccaccgcgcccggc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666423 259 + 192294377 acccaggctggagtgcagttgtgcgatctcggctcactgcaacctccgcctccctggttcaagccattctcctgcctcagcctcccaagtagctgggattacaggtgcccgtcaccacgcctggctaattttttggaattttagtagagacagggttttaccatgttggtcaggctggtctcagactcctgacctc--gtgatccgcccacctcggcctcctgaagtcctgggattacaggtgtgagccactgcgcccggc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4432978 259 - 9440265 acccaggctggagtgcagtggtgcgatctcagctcactgcaacctcggcctccctggttcaagccattctcctgcctcagcctcccaagtagctgggattacaggtgcccgtcaccacgcctggctaattttttggaattttagtagagacagggtttcaccatgttggtcaggctggtctcagactcctgacctc--gtgatccgcccacctcggcctcctgaagtcctgggattacaggcgtgagccaccgcgcccggc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023009 259 - 21915920 acccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgcctcccgggttcaagccattctcctgcctcagcctcccaagtagctgggattacaggtgcccgtcaccacgcctggctaattttttggaattttagtagagacagggtttcaccatgttggtcaggctggtctcagactcctgacctc--gtgatccgcccacctcggcctcctgaagtcctgggattacaggcgtgagccaccgagcccggc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 152738 259 - 21531802 gcccaggctggagtgcagtggtgcgatctcggctcgctgcgacccccgcctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggcgcgcgtcaccacgtctggctaattttttggaattttagtagagacggggtttcaccatgttggtcaggctggtctcagactcctgacctt--gtgatccgcccgcctcggcctcccaaagtcctgggattacaggcgtgagccaccgcgcccggc i chlSab2.chr28 I 495 C 0 s manLeu1.NW_012101810v1 190111 259 - 2515279 gcccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgcctcccgggttcaagccattctcctgcctcagcctcccaagtagctgggattacaggtgcccgtcaccacgcctggctaattttttggaattttagtagagacagggtttcaccatgttggtcaggctggtctcagactcctgacctc--gtgatccacccaccttggcctcctgaagtcctgggattacaggcgtgagccaccgcgcccggc i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345079 237 + 6586416 gcccaggctggagtgcagtggcaggatctcggctcactgcaagctccgcctcccgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggtgcctgtcaccacgctcggctaattttttggaattttagtagagacagggtttcaccatgttggtcaggctggtctcagactcctgacctt--gtgatccgcctgcctcggcctcccgaagtcct----------------------gCGCTTGGC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2277740 3929 - 8137123 I e canFam3.chr6 61066745 4489 - 77573801 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I e saiBol1.JH378296 388292 4410 - 2409723 I e cebCap1.NW_016107703v1 549687 4515 - 2125214 I e calJac3.chrUn_GL286444 75702 4352 + 138751 I a score=113741.000000 s hg38.chr7_KI270899v1_alt 178332 11 + 190869 cCAGGTAGAAC s panTro5.chr7_NW_015973580v1_random 53669 11 - 83720 cCAGGTAGAAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568237 11 + 162613886 cCAGGTAGAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139665 11 - 432965 cCAGGTAGAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202171 11 + 85365473 cCAGGTAAAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34048782 11 + 185818997 cCAGGTAGAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666682 11 + 192294377 cCAGGTAGAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433237 11 - 9440265 cCAGGTAGAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023268 11 - 21915920 cCAGGTAGAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 152997 11 - 21531802 cCAGGTAGAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190370 11 - 2515279 cCAGGTAGAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345316 11 + 6586416 CCAGGTAGAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80054 11 + 138751 ccaggtagata i calJac3.chrUn_GL286444 I 4352 C 0 s saiBol1.JH378296 392702 11 - 2409723 ccaggtagaga i saiBol1.JH378296 I 4410 C 0 s otoGar3.GL873611 2281669 11 - 8137123 ccGGGTAGAAA i otoGar3.GL873611 I 3929 C 0 s canFam3.chr6 61071234 11 - 77573801 CCAGGTAGAAA i canFam3.chr6 I 4489 C 0 e aotNan1.NW_018514293v1 142693 3976 + 376347 I e cebCap1.NW_016107703v1 549687 4515 - 2125214 I a score=450605.000000 s hg38.chr7_KI270899v1_alt 178343 64 + 190869 TATTTTTAAA-GCCAGCTT-TTG--TTCATTATACCACACTGTG-TCTA-CGAACAATCTGTAGACTGTG s panTro5.chr7_NW_015973580v1_random 53680 64 - 83720 TATTTTTAAA-GCCACCTT-TTG--TTCATTATACCACACTGTG-TCTA-CAAACAATCTGTAGACTGTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568248 64 + 162613886 TATTTTTAAA-GCCAGCTT-TTG--TTCATTATACCACACTGTG-TCTA-CGAACAATCTGTAGACTGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139676 64 - 432965 TATTTTTAAA-GCCAGCTT-TTG--TTCATTATACCACAGTGTG-TCTA-CGAACAATCTGTAGACTGTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202182 63 + 85365473 TATTTTTAAA-GCCAGCTTCTCT--TTCATTATACGACAC--TG-TCTG-TGAACAAGCTGTAGAAGGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34048793 62 + 185818997 TATTTTTAAA-GTCAGTTT-TTG-TTTCGTTATACCACACTGTG-TCTA-CGAGCAAGCTGTAGACT--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666693 62 + 192294377 TATTTTTAAA-GTCAGTTT-TTG-TTTCGTTATACCACACTGTG-TCTA-CGAACAAGCTGTAGACT--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433248 62 - 9440265 TATTTTTAAA-GTCAGTTT-TTG-TTTCGTTATACCACACTGTG-TCTA-CGAACAAGCTGTAGACT--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023279 62 - 21915920 TATTTTTAAA-GTCAGTTT-TTG-TTTCGTTATACCACACTGTG-TCTA-TGAACAAGCTGTAGACT--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153008 65 - 21531802 TATTTTTAAA-GTCAGTTT-TTG-TTTCGTTAGACCATACTGTG-TCTA-CGAACACGCTGTGGACTGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190381 62 - 2515279 TATTTTTAAG-GTCAGTTT-TTG-TTTCGTTATACCACCCTGTG-TCTA-CGAACAAGCTGTAGACT--- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345327 65 + 6586416 TATTTTTAAA-GTCAGTTT-TTT-TTTCGTTATAGCACACTGTG-TCTA-CGAACAAGCTGTAGACTGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80065 60 + 138751 tatttttaaa-gccagctt-tcg-ttttattattctactctgtg-tctg-tgaacaagctgtaga----- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 392713 61 - 2409723 tatttttaga-gccagctt-ttg-ttttattactccactctgtg-tctg-tgaacaagctgtaGAC---- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 554202 65 - 2125214 TATTTTTAAA-GCCAGCTT-TTG-TTTTATTATTCCACTCTGTG-TCTG-TGAACACGCTGCAGACTGTG i cebCap1.NW_016107703v1 I 4515 I 36 s otoGar3.GL873611 2281680 61 - 8137123 TTTCTTTCCA-GGTAGAAT-GTA------TTACCCTGCATTGCGTTCCG-TGAGCAGACTGTGGATTATA i otoGar3.GL873611 C 0 I 2 s canFam3.chr6 61071245 68 - 77573801 TATTTTTAAAGGTGAGCTC-TTGTTTTTAATAAACTGTGCTGTG-TTGAGTGAGCAGACTGCAGATCATG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 142693 3976 + 376347 I a score=116489.000000 s hg38.chr7_KI270899v1_alt 178407 40 + 190869 TGCTCGTGTGCCTGTGCACCG--G---TGTGTGTGTGTGGATGCC s panTro5.chr7_NW_015973580v1_random 53744 40 - 83720 TGCTCGTGTGCCTGCACACTG--G---TGTGTGTGTGCGGACACC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568312 40 + 162613886 TGCTCGTGTGCCTGCGCACTG--G---TGTGTGTGTGCGGACGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139740 42 - 432965 TGCTCGTGTGCCTGCGCACCGGTG---TGTGTGTGTGCGGACGCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202245 42 + 85365473 TGCTTGTGTGCCGGCACACAGGTG---TGTGTGTGAGTAGACGCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34048855 21 + 185818997 ---------------------GTG---CGTGTGTGTGTAGACGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666755 21 + 192294377 ---------------------GTG---CGTGTGTGTGTAGATGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433310 21 - 9440265 ---------------------GTG---CGTGTGTGTGTAGACGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023341 21 - 21915920 ---------------------GTG---CGTGTGTGTGTAGACGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153073 40 - 21531802 CG--TGTGTGCCTGTGCACAGGTG---CGTGTGTGTGTAGACGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190443 21 - 2515279 ---------------------GTG---CGTGTGTGTGTAGACGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345392 40 + 6586416 CA--TGTGTGCCTGCGCACAGGTG---CGTGTGTGTGTAGGCGCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80125 40 + 138751 --catgggtgcctatgtgcagggg---cctgtgtatgcggactct i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 392774 40 - 2409723 --CGTGGGTGCCTATGAGCACGTG---CGTGTGTATGCAGACCCT i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2281743 40 - 8137123 TGCAGACATGCCTGTATATATGTG---CAAGTGTATGTAGCCA-- i otoGar3.GL873611 I 2 C 0 s canFam3.chr6 61071313 45 - 77573801 TATGCATATGCTTCTGCATGAATGTATCATATGTACGTACACtca i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 142693 3976 + 376347 I e cebCap1.NW_016107703v1 554267 36 - 2125214 I a score=412622.000000 s hg38.chr7_KI270899v1_alt 178447 43 + 190869 GTGAACAGACTCTAGATTATCTGCCTTTTGGAATTTCCCGACA s panTro5.chr7_NW_015973580v1_random 53784 43 - 83720 GTGAACAGGCTCTAGATTATCTGCCTTTTGGAATTTCCTGACA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568352 43 + 162613886 GTGAACAGGCTCTAGATTATCTGCCTTTTGGAATTTCCTGACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139782 43 - 432965 GTGAACAGGCTCTAGATTATCTGCCTTTTGGAATTTCCCGACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202287 43 + 85365473 GTggacagactctagatcatctgccttttggaatttcttgaca i nomLeu3.chr20 C 0 I 1 s rheMac8.chr3 34048876 42 + 185818997 GTG-ACAGCCTCTAGATTATCTGCCTTTTGGAATTTCTTGATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666776 42 + 192294377 GTG-acagcctctagattatctgccttttggaatttcttgata i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433331 42 - 9440265 GTG-ACAGCCTCTAGATTATCTGCCTTTTGGAATTTCTTGATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023362 42 - 21915920 GTG-ACAGCCTCTAGATTATCTGCcttttggaatttcttgata i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153113 41 - 21531802 GTG-ACAGCCTC-AGATTATCTGCCTTTTGGAATTTCTTGATA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190464 42 - 2515279 GTG-acagcctctagattatttgccttttggaatttcttgata i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345432 40 + 6586416 ATG-ACAGACT--AGATTATCTGCCTTTTGGAATTTCTTGATA i colAng1.NW_012117710v1 C 0 I 28 s calJac3.chrUn_GL286444 80165 43 + 138751 gtgaacagactctagattatctgccttttggaatttcttgaca i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 392814 43 - 2409723 GTgaacggactctggattatctgccttttggaatttcttgaca i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 554303 43 - 2125214 GTgaacagactctagattatctgccttttggaatttcttgaca i cebCap1.NW_016107703v1 I 36 I 1 s otoGar3.GL873611 2281783 42 - 8137123 GTGAACAGACTGTAG-CTAACCGCCTTTTGGAATTTCTTGACA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61071358 42 - 77573801 gtgaacagactgcagattatctgcc-tttgcaatttcttgaca i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 142693 3976 + 376347 I a score=29163.000000 s hg38.chr7_KI270899v1_alt 178490 4 + 190869 TTGT s panTro5.chr7_NW_015973580v1_random 53827 4 - 83720 TCGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568395 4 + 162613886 TCGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139825 4 - 432965 TCGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202331 4 + 85365473 tttt i nomLeu3.chr20 I 1 C 0 s rheMac8.chr3 34048918 4 + 185818997 TTTT i rheMac8.chr3 C 0 I 28 s macFas5.chr3 33666818 4 + 192294377 tttt i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4433373 4 - 9440265 TTTT i macNem1.NW_012019910v1 C 0 I 28 s cerAty1.NW_012002954v1 17023404 4 - 21915920 tttt i cerAty1.NW_012002954v1 C 0 I 28 s chlSab2.chr28 153154 4 - 21531802 TTTT i chlSab2.chr28 C 0 I 1 s manLeu1.NW_012101810v1 190506 4 - 2515279 tttt i manLeu1.NW_012101810v1 C 0 I 28 s calJac3.chrUn_GL286444 80209 4 + 138751 tttt i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 392858 4 - 2409723 tttt i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 554347 4 - 2125214 tttt i cebCap1.NW_016107703v1 I 1 C 0 s otoGar3.GL873611 2281825 4 - 8137123 TTTT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61071400 4 - 77573801 tttt i canFam3.chr6 C 0 I 4 e colAng1.NW_012117710v1 345472 28 + 6586416 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I a score=81907.000000 s hg38.chr7_KI270899v1_alt 178494 22 + 190869 GTGACCATCAGAAC-ATGATCAG s panTro5.chr7_NW_015973580v1_random 53831 22 - 83720 GTGACCATCAGAAC-ATGATCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568399 22 + 162613886 GTGACCATCAGAAC-ATGATCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139829 22 - 432965 GTGGCCATCAGAAC-ATGATCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202335 22 + 85365473 atgaccatcaaaat-atggtcag i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33666823 22 + 192294377 atgacgagcaaaat-gtagtcag i macFas5.chr3 I 1 C 0 s chlSab2.chr28 153159 22 - 21531802 ATGACGAGCAAAAC-GTGGTCAG i chlSab2.chr28 I 1 C 0 s calJac3.chrUn_GL286444 80213 22 + 138751 atgaccatcagaat-atggtcag i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 392862 22 - 2409723 atgaccatcagaat-atggtcag i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 554351 22 - 2125214 atgaccatcagaat-atggtcag i cebCap1.NW_016107703v1 C 0 I 27 s otoGar3.GL873611 2281829 22 - 8137123 -TTAATATCAAAATAATGGTCAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61071408 19 - 77573801 atggtccacag----atggtcag i canFam3.chr6 I 4 C 0 e colAng1.NW_012117710v1 345472 28 + 6586416 I e manLeu1.NW_012101810v1 190510 28 - 2515279 I e cerAty1.NW_012002954v1 17023408 28 - 21915920 I e macNem1.NW_012019910v1 4433377 28 - 9440265 I e rheMac8.chr3 34048922 28 + 185818997 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I a score=15975.000000 s hg38.chr7_KI270899v1_alt 178516 4 + 190869 TGTT s panTro5.chr7_NW_015973580v1_random 53853 4 - 83720 TGTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568421 4 + 162613886 TGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139851 4 - 432965 TGTT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202357 4 + 85365473 tttt i nomLeu3.chr20 C 0 C 0 s macFas5.chr3 33666845 4 + 192294377 tttt i macFas5.chr3 C 0 I 1 s chlSab2.chr28 153181 4 - 21531802 TTTT i chlSab2.chr28 C 0 I 1 s colAng1.NW_012117710v1 345500 4 + 6586416 TTTT i colAng1.NW_012117710v1 I 28 C 0 s calJac3.chrUn_GL286444 80236 4 + 138751 tctt i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 392885 4 - 2409723 tctt i saiBol1.JH378296 I 1 C 0 s otoGar3.GL873611 2281851 4 - 8137123 TTTT i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61071427 4 - 77573801 tttt i canFam3.chr6 C 0 I 1 e manLeu1.NW_012101810v1 190510 28 - 2515279 I e cerAty1.NW_012002954v1 17023408 28 - 21915920 I e macNem1.NW_012019910v1 4433377 28 - 9440265 I e rheMac8.chr3 34048922 28 + 185818997 I e aotNan1.NW_018514293v1 142693 3976 + 376347 I e cebCap1.NW_016107703v1 554373 27 - 2125214 I a score=135197.000000 s hg38.chr7_KI270899v1_alt 178520 18 + 190869 GCGAATGCTCCATGTGTA s panTro5.chr7_NW_015973580v1_random 53857 18 - 83720 GCGAATGCTCCATGCGTA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568425 18 + 162613886 GCGAATGCTCCATGCGTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139855 18 - 432965 GTGAATGCTCCATGCGTA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202361 18 + 85365473 gtggatactccacgtgca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34048950 18 + 185818997 GTGGATACTCCGTGTATA i rheMac8.chr3 I 28 C 0 s macFas5.chr3 33666850 18 + 192294377 gtggatactccgtgtata i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4433405 18 - 9440265 GTGGATACTCCGTGTATA i macNem1.NW_012019910v1 I 28 C 0 s cerAty1.NW_012002954v1 17023436 18 - 21915920 gtggatactccatgtata i cerAty1.NW_012002954v1 I 28 C 0 s chlSab2.chr28 153186 18 - 21531802 GTGGCTACTCCGTGTATA i chlSab2.chr28 I 1 C 0 s manLeu1.NW_012101810v1 190538 18 - 2515279 gtggatactccatgtata i manLeu1.NW_012101810v1 I 28 C 0 s colAng1.NW_012117710v1 345504 18 + 6586416 GTGGATACTCCGTGTATA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80240 18 + 138751 gtggatactccatgtcta i calJac3.chrUn_GL286444 C 0 I 4 s saiBol1.JH378296 392889 18 - 2409723 gtggatactctgtgtcta i saiBol1.JH378296 C 0 I 4 s otoGar3.GL873611 2281856 18 - 8137123 GTGATTATTCTATAAATA i otoGar3.GL873611 I 1 I 7 s canFam3.chr6 61071432 18 - 77573801 atggctattccatgtATG i canFam3.chr6 I 1 C 0 e aotNan1.NW_018514293v1 142693 3976 + 376347 I e cebCap1.NW_016107703v1 554373 27 - 2125214 I a score=12376.000000 s hg38.chr7_KI270899v1_alt 178538 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 53875 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568443 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139873 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202379 1 + 85365473 A i nomLeu3.chr20 C 0 M 335 s rheMac8.chr3 34048968 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666868 1 + 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433423 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023454 1 - 21915920 a i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153204 1 - 21531802 A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190556 1 - 2515279 a i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345522 1 + 6586416 A i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80262 1 + 138751 a i calJac3.chrUn_GL286444 I 4 C 0 s saiBol1.JH378296 392911 1 - 2409723 a i saiBol1.JH378296 I 4 C 0 s cebCap1.NW_016107703v1 554400 1 - 2125214 a i cebCap1.NW_016107703v1 I 27 C 0 s otoGar3.GL873611 2281881 1 - 8137123 A i otoGar3.GL873611 I 7 C 0 s canFam3.chr6 61071450 1 - 77573801 A i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 142693 3976 + 376347 I a score=351408.000000 s hg38.chr7_KI270899v1_alt 178539 51 + 190869 CGGACTGTGAGTCCTGTGTTTG---------ACGGATACAAAATAAAGTCAAGCTTTTAC s panTro5.chr7_NW_015973580v1_random 53876 51 - 83720 CGGACTGTGAGTCCTGTGTTTG---------AGGGATACAAAATAAAGTCAAGCTTTTAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568444 51 + 162613886 CGGACTGTGAGTCCTGTGTTTG---------AGGGATACAAAATAAAGTCAAGCTTTTAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139874 51 - 432965 CAGACTGTGAGTCTTGTGTTTG---------AGGGATACAAAATAAAGTCAAGCTTTTAC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34048969 50 + 185818997 TAGAATGTGAATCCTGTATGTG---------AGGGATACCAAATAAAGTCAAGA-TTTAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666869 50 + 192294377 tagaatgtgaatcctgtaTGTG---------AGGGATACCAAATAAAGTCAAGA-TTTAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433424 50 - 9440265 TAGAATGTGAATCCTGTATGTG---------AGGGATACCAAATAAAGTCAAGA-TTTAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023455 50 - 21915920 tagaatgtgaatcctgtaTGTG---------AGGGATACCAAATAAAGTCAAGA-TTTAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153205 50 - 21531802 TAGAATGCGAATCCTGTACGTG---------AGGGATACAAAATAAAGTCAAGA-TTTAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190557 50 - 2515279 tagaatgtgaatcctgtaTGTG---------AGGGATACCAAATAAAGTCAAGA-TTTAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345523 50 + 6586416 TAGAATGTGAATCCTGTATGTG---------AGGGATACAAAATAAAGTCAAGA-TTTAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80263 51 + 138751 aaaaatataaatcctgtatttg---------agaggtacaaaataaagttaagcttttaa i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 392912 51 - 2409723 aaaaatgtaaatcctgtatttg---------AGAGATACAAAGTAAAGTTAAGCTTTTAA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 554401 51 - 2125214 aaaaatgtaaatcctgtatttg---------AGAGATACAAAATAAAGTTAAGCTTTTAA i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2281882 48 - 8137123 AAGAATATAACGCATAT---TT---------AAGAATACAAAATCAAGTCAAGCTTTTAT i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61071451 59 - 77573801 -TATATATAAATCGTGTATTTGAGCAATTCAAGACATACAAAATAAAGTCAAGCTTTTTT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 142693 3976 + 376347 I e nomLeu3.chr20 202380 335 + 85365473 M a score=297834.000000 s hg38.chr7_KI270899v1_alt 178590 30 + 190869 ATTG-TTTTATTCTTGTGTTTTCGGCTTCTT s panTro5.chr7_NW_015973580v1_random 53927 30 - 83720 ATTG-TTTTATTCTTGTGTTTTCCGCTTCTT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568495 30 + 162613886 ATTG-TTTTATTCTTGTGTTTTCGGCTTCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139925 30 - 432965 ATTG-TTTTATTCTTGTGTTTTCGGCTTCTT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34049019 30 + 185818997 ATTG-TTTTATTCTTGTGTTTTCAGCTTCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666919 30 + 192294377 ATTG-TTTTATTCTTGTGTTTTCAGCTTCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433474 30 - 9440265 ATTG-TTTTATTCTTGTGTTTTCAGCTTCTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023505 30 - 21915920 ATTG-TTTTATTCTTGTGTTTTCAGCTTCTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153255 30 - 21531802 ACTG-TTTTATTCTTGCGTTTTCAGCTTCTT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190607 30 - 2515279 ATTG-TTTTATTCTTGTGTTTTCAGCTTCTT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345573 31 + 6586416 ATTGTTTTTATTCTTGTGTTTTCAGCTTCTT i colAng1.NW_012117710v1 C 0 I 313 s calJac3.chrUn_GL286444 80314 30 + 138751 attg-ttttattcttttgtttatagcttctt i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 392963 30 - 2409723 ATTG-TTTTATTCTTCTGTTTTTAGCTTCTT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 554452 30 - 2125214 ATCA-TTTTATTCTTCTGTTTTTAGCTTCTT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 146669 30 + 376347 aTTG-TTTTATTCTTCTGTTTTCAGCTTCTT i aotNan1.NW_018514293v1 I 3976 C 0 s otoGar3.GL873611 2281931 30 - 8137123 ATAG-TTTTATCTGCACGTTTTTTGCCTCTT i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61071510 30 - 77573801 ATTG-TTTTCTTTGTTCATTTTTGGCTTTTT i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 202380 335 + 85365473 M a score=283044.000000 s hg38.chr7_KI270899v1_alt 178620 27 + 190869 GATCGGTT---GCTTTTAATGAAAACGAAT s panTro5.chr7_NW_015973580v1_random 53957 27 - 83720 GATCTGTT---GCTTTTACTGAAAACAAGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568525 27 + 162613886 GATCTGTT---GCTTTTAATGAAAACAAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139955 27 - 432965 GATCTGTT---GCTTTTAATGAAAACAAGT i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34049049 27 + 185818997 GATCTGTT---GCTTTTAATGAAAACAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666949 27 + 192294377 GATCTGTT---GCTTTTAATGAAAACAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433504 27 - 9440265 GATCTGTT---GCTTTTAATGAAAACAAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023535 27 - 21915920 GATCTGTT---GCTTTTAATGAAAACAAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153285 27 - 21531802 GATCTGTT---GTGTTTAATGAAAACAAAT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190637 27 - 2515279 GATCTGTT---GCTTTTAATGAAAACAAAT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345917 27 + 6586416 GATCTGTT---GCTTTTAATGAAAACAAAT i colAng1.NW_012117710v1 I 313 C 0 s calJac3.chrUn_GL286444 80344 27 + 138751 gatctgtt---gcttTTAATTAAAACAAAT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 392993 27 - 2409723 GATCTGTT---GCTTTTAATTAAAACAAAT i saiBol1.JH378296 C 0 I 319 s cebCap1.NW_016107703v1 554482 27 - 2125214 GATCTGTT---GCTTTTAATTAAAACAAAT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 146699 27 + 376347 GATCTGTT---GCTTTTAATTAAAACAAAT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2281961 30 - 8137123 GATCTGTTGTCGCTTTTAATTAGAACAAAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61071540 27 - 77573801 GAACTGTT---GCTTTAAATTAGGACAAAG i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 202380 335 + 85365473 M a score=679848.000000 s hg38.chr7_KI270899v1_alt 178647 91 + 190869 GAGTTCTATTTT-CAAAGACCC--TCAGACGGTGGGTGGGGAACGGATAGCCCAGGAGTCCAGCGT------------------------TGGGGCGGACTGGCCGGCGGGCCAGCGA s panTro5.chr7_NW_015973580v1_random 53984 91 - 83720 GAGTTCTATTTT-CAAAGACCC--TCAGACGGTGGGTGGGGAACGGAGAGCCCAGGAGTCCAGCGC------------------------TGGGGCGGACTGGCCGGCCGGCCAGCGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568552 91 + 162613886 GAGTTCTATTTT-CAAAGACCC--TCAGACGGTGGGTGGGGAACGGATAGCCCAGGAGTCCAGCGC------------------------TGGGGCGGACTGGCCGGCCGGCCAGCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 139982 91 - 432965 GAGTTCTATTTT-CAAAGACCC--TCAGACGGTGGGTGGGGAACGGATAGCCCAGGAGTCCAGCGC------------------------TGGGGCGGACTGGCCGGCCGGCCAGCGA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34049076 91 + 185818997 GAGTTATCTTTT-CAGAGACCC--TCAGACTGTGGATGGGGAATGGGTAGCCCAGGAGTCCAGCGT------------------------CGGGGCGGACTGGCCGGCCGGCCAGCGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33666976 91 + 192294377 GAGTTATCTTTT-CAGAGACCC--TCAGACTGTGGATGGGGAATGGGTAGCCCAGGAGTCCAGTGT------------------------CGGGGCGGACTGGCCGGCCGGCCAGCGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433531 91 - 9440265 GAGTTATCTTTT-CAGAGACCC--TCAGACTGTGGATGGGGAATGGGTAGCCCAGGAGTCCAGCGT------------------------CGGGGCGGACTGGCCGGCTGGCCAGTGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023562 91 - 21915920 GAGTTATCTTTT-CAGAGACCC--TCAGACTGTGGATGGGGAATGGGTAGCCCAGGAGTCCAGCGT------------------------TGGGGCAGACTGGCCGGCCGGCCAGCGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153312 83 - 21531802 GAGTTATCTTTT-CAGAGACCC--TCAGACTGTGGATGGCGAATGGATAGCCCAGGAGTCCAGCGT------------------------CGGGGCGGACTGGCCGGCCG-------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190664 91 - 2515279 GAGTTATCTTTT-CAGAGACCC--TCAGACTGTGGATGGGGAATGGGTAGCCCAGGAGTCCAGCGT------------------------CGGGGCGGACTGGCCGGCCGGCCAGCGA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 345944 91 + 6586416 GAGTTATCTTGT-CAGAGACCC--TGAGACTGTGGATGGGGAATGGAGAGCCCAGGAGTCCAGCGT------------------------CAGGGTGGACTGGCCGGCCGGCCAGTGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80371 116 + 138751 GAGTCCTATTTT-CAAAGACCC-CTCAGGCTCTGGGTGGGGGATAGATAGCTCAGGAGTCCAGCATGGAGCTGGCCCAGAAGTCTAGCGTTGGGGCTGACTGGCTGGCTGGACAAAGA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 393339 116 - 2409723 GAGTTCTATTTT-CAAAGACCC-CTCAGGCTATGGATGGTGAGTAGATAGCTCAGGAGTCCAGCATGGAGCTGGCCCAGAAGTCTAGCACTGGGGCTGACTGGCTGGCTGGACAGAGA i saiBol1.JH378296 I 319 C 0 s cebCap1.NW_016107703v1 554509 116 - 2125214 GAGTTCTATTTT-CAAAGACCC-CTAAGGCTATGGGTGGGGGATAGATAGCTCAGGAGTCCAGCATGGAGCTGGCCCAGAAGTCTAGCAATGGGGCTGACTGGCTGGCTGGACAGAGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 146726 115 + 376347 GAGTTCTATTTT-CAAAGACCC-TTCAGGCTGTGG-TGGGAGACAGAGAGCTCAGGAGTCCAGCATGGAGCTGGCCCAGAAGTCTGGCACGGGGGCTGACTGGCTGGCTGGACAGAGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2281991 105 - 8137123 GAATTATAGTTT-CAAAGACTCCCCCACACTGTGGCTGGAGAAGGAACAGACCAAAGGTCCAGGAAGGAGGAGCTCCA------------GCAGGCAAAGGGGCTGGGTGGCCAGAGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61071567 68 - 77573801 AAACCCTATTTTCCAAAGACCC-CCGAGGCTGCGG-------ATGAATGGGCCAGAGGCTCCTCCT---------------------------GGTCCACTGA--------------- i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 202380 335 + 85365473 M a score=2579132.000000 s hg38.chr7_KI270899v1_alt 178738 276 + 190869 CAGCAGCCGGAGGGACGAGCACGACCC---TCCC-------------CAGCCACCCC--GCGTCCCCCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CATTTTCTCCTGCTAGCGG------CTCTCCCG----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-GCCCGTCAGCACC--CACAGCCAAGCGGGAGGCCTGGGGAGGAAGGAATATTGTCCCGTT--CTGGCTTTGCC-GGCCAGGATTAGAATTGCACGC-------------GGCGCAGCATCTGGCGCCCGCTGGACGCTCAGTAAGGACAAGACGGC s panTro5.chr7_NW_015973580v1_random 54075 276 - 83720 CAGCAGCCGGAGGGACCACCACGACCC---TCCC-------------CAGCCACCCC--GCGTCCCTCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CATTTTCTCCTGTTAGCGG------CTCTCCCG----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-GACCGTCAGCACC--CGCAGCCAAGCGGGAGGCCTGGGGAGGAAGGAATATTGTCCCCTT--CTGGCTTTGCC-GGCCAGGATTAGAATTGCACGC-------------GGCGCAGCATCTGGCGCCCGCTGGACGCTCAGTAAGGACAAGACGGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568643 277 + 162613886 CAGCAGCCGGAGGGACCACCACGACCC---TCCC-------------CAGCCACCCC--GCGTCCCTCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CATTTTCTCCTGTTAGCAG------CTCTCCCG----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-GACCGTCAGCACC--CGCAGCCAAGCGGGAGGCCTGGGGAGGAAGGAATATTGTCCCCTT--CTGGCTTTGCC-GGCCAGGATTAGAATTGCACGC------------GGGCGCAGCATCTGGCGCCCGCTGGACGCTCAGTAAGGACAAGACGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 140073 275 - 432965 CAGCAGCCAGAGGGACCAGCACGACCC---TCCC-------------CAGCCACCCC--GCGTCCCTCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CATTTTCTCCTGCTGGCGG------CTCTCCCG----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-GACCGTCAGCACC--CGCAGCCAAGCGGGAGGCCAGGGGAGGAAGGAATATTGT-CCGTT--CTGGCTTTGCC-GGCCAGGATTAGAATTGCACGC-------------GGCGCAGCATCTGGCGCCCGCTGGATGCTCAGTAAGGACAAGACGGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202716 275 + 85365473 CAGCAGCCGGAGGAACCAGCACAACCC---TCCC-------------CAGACACCCC--GCGTCCCCCGAACCCAGCCCAGG-AGATGCAGA-----------------------GCTCA---CATTTTCTCCCGCTAGCGG------CTCTCTCA----------GCTCCC---GTGAGCCCCGATAGCCAGGCCCATT-AACCGTCAGCACC--TGCAGCCAAGCGGGAGGCCTGGGGAGGAAGGAATATTGTCCTGTT--CTGGCTTCGCCAGGCCAGGATTAGAATTGCCCGC-------------GGCGCAGCATCTGGCGCTCGCTGGATGCTCAGTAAGGACAAGACGGC i nomLeu3.chr20 M 335 C 0 s rheMac8.chr3 34049167 276 + 185818997 CAGCAGCCAGAGGGACCAGCGCCACCC---TGCC-------------CCGCCACCCC--GCGTCCCTCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CA-TTTCTCCTGCTAGCGG------CTCTCCCA----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-CCCTGTCAGCACC--TGCAGCCAAGCGGGAGGCCTGGGGACGGAGGAATACTGTCCTGTT--CTGGCTTCGCCAGGCCAGGATTAGAACTGCATGC-------------AGTGCAGCATCTGACGCTCGCTGGACGCTCAGGAAGGACGAGACGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33667067 276 + 192294377 CAGCAGCCAGAGGGACCAGCGCCACCC---TGCC-------------CCGCCACCCC--GCGTCCCTCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CA-TTTCTCCTGCTAGCGG------CTCTCCCG----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-CCCTGTCAGCACC--TGCAGCCAAGCAGGAGGCCTGGGGACGGAGGAATATTGTCCTGTT--CTGGCTTCGCCAGGCCAGGATTAGAACTGCATGC-------------AGTGCAGCATCTGACGCTCGCTGGACGCTCAGGAAGGACGAGACGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433622 276 - 9440265 CAGCAGCCAGAGGGACCAGCGCCACCC---TGCC-------------CCGCCACCCC--GCGTCCCTCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CA-TTTCTCCTGCTAGCGG------CTCTCCCG----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-CCCTGTCAGCACC--TGCAGCCAAGCGGGAGGCCTGGGGACGGAGGAATATTGTCCTGTT--CTGGCTTCGCCAGGCCAGGATTAGAACTGCATGC-------------AGTGCAGCATCTGACGCTCGCTGGACGCTCAGGAAGGACGAGACGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023653 276 - 21915920 CAGCAGCCAGAGGGACCAGCGCCACCC---TGCC-------------CAGCCACCCC--GCGTCCCTCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CA-TTTCTCCTGCTAGCAG------CTCTCCCG----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-CCCTGTCAGCACC--TGCAGCCAAGCGGGAGGCCTGGGGATGGAGGAATATTGTCCTGTT--CTGGCTTCGCCAGGCCAGGATTAGAACTGCATGC-------------AGTGCAGCATCTGACGCTCGCTGGACGCTCAGGAAGGACAAGACGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153395 256 - 21531802 --------------------GCCACCC---TCCC-------------CAGCCACCCC--GTGTCCCTCGAACCCAGCCCAGC-AGATGCCGA-----------------------GTTCT---CA-TTTCTCCTGCTAGCGG------CTCTCCCA----------GCTCCC-CTGTGAGCCTCGATAGCCAGGCCCATT-CCCTGTCAGCACC--TGCAGCCACGCGGGAGGCCTGGGGACGGAGGAATATTGTCCTGCT--CTGGCTTCGCCAGGCCAGGATTAGAACTGCATGC-------------AGTGCAGCATCTGACGCTCGCTGGACGCTCAGTAAGGACGAGACGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 190755 276 - 2515279 CAGCAGCCAGAGGGACCAGCGCCACCC---TGCC-------------CAGCCACCCC--GCGTCCCTCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CA-TTTCTCCTGCTAGCAG------CTCTCCCG----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-CCCTGTCAGCACC--TGCAGCCAAGCGGGAGGCCTGGGGACGGAGGAATATTGTCCTGTT--CTGGCTTCGCCAGGCCAGGATTAGAACTGCATGC-------------AGTGCAGCATCTGATGCTCGCTGGACGCTCAGGAAGGACGAGACGGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 346035 276 + 6586416 CAGCAGCCGGAGGGACCAGCGCCACCC---TCCC-------------CAGCCACCCC--GCGTCCCTCGAACCCAGCCCAGC-AGATGCAGA-----------------------GCTCA---CA-TTTATCCTGCTAGCGT------CTCTCCTG----------GCTCCC-CTGTGAGCCCCGATAGCCAGGCCCATT-CCCTGTCAGCACC--TGCAGCCAAGTGGGAGGCCTGGGGACGGAGGAATATTGTCCTGCT--CTGGCTTCGCCAGGCCAGGATTAGAATTGCATGC-------------AGTGCAGCATCTGACGCTCGCTGGACGCCCAGTAAGGACGAGACAGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80487 272 + 138751 TGGCAGCCGGAGGGACCAGTACAACCC---TCCC-------------CAACCATCCT--GTGTCCCTCAAACCCAGACCAGC-AAATGCAGA-----------------------GCTCA---TATTTTCTCCTGCTAGAGG------CTCTCCCA----------GCTCCC-CTGTAAGCCCCGATAACCAGGCCCATT-CCCCATCAGCACC--TGCAGC----CA-GAGGCCTGGATTAGGAGGAATACTGTCCTGTT--CTGGCTTCACTGGGCCAGGATTAGAACTGCACAT-------------GGCTCAGCATCTGGCGCTCACTGGACGCTGGGTAAGGACAAGATGGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 393455 276 - 2409723 TGGCAGCCGGAGGGACCAGCACGACCC---TCTC-------------CAGCCATCCT--GTGTCCCTTAAACCCAGCCCAGC-AAATGCAGA-----------------------GCTCA---CATTTTCTCCTGCTAGAGG------CTCTCCCA----------GCTCCC-CTGTGAGCCCCGATAACCAGGCCTGTT-CCCCAGCAGCACC--TGCAGCCCAGCA-GAGGCCTGGGGAAGGAGGAATACTATCCTGTT--CTGGCTTCGCTGGGCCAGGATTAGAATTGCACGT-------------GGCGCAGCATCTGGCACTCACTGGACGCTGGGTAAGGACAAGACGGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 554625 275 - 2125214 TGGCA-CCGGAGGGACCAGCACGACCC---TCCC-------------CAGCCATCCT--GTGTCCCTCAAACCCAGCCTAGC-AAATGCAGA-----------------------GCTCA---CATTTTCTCCTGCTAGAGG------CTCTCCCA----------GCTCCC-CTGTGAGCCCCGATAACCAGGCCCATG-CCCCATCAGCACC--TGCAGCCGAGGA-GAGGCCTGGGGAAGGAGGAATACTATCCTGTT--CTGGCTTCACTGGGCCAGGATTAGAATTGCACGT-------------GGTGCAGCATCTGGCGCTCACTGGACGCTGGGTGAGGACAAGACAGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 146841 276 + 376347 CGGCAGCCGGAGGGACCAGCACGACCC---TCCC-------------CAGCCATCCT--GTGTCCCTCAAACCCAGCCCAGC-AGACGCAGA-----------------------GCTCA---CATTTTCTCCTGCTAGAGG------CTCTCCCA----------GCTCCC-CTGTGAGCCCTGATAACCAGGCCCATT-CCCCATCAGCACC--GGCAGCCGAGCA-GAGGCCTGGGGAAGGAGGAATACCGTCCTGTT--CTGGCTTCGCTGGGCCAGGATTAGACCTGCACGT-------------GGCGCAGCCCCCGGGGCTCACTGGACGCTGGGTAAGGACAAGACCCC i aotNan1.NW_018514293v1 C 0 I 1525 s otoGar3.GL873611 2282096 327 - 8137123 TGGTGGCAAAAGGAATGGGCCACACTT---ATCCACAGAATAGACCTCAGCTGCCCCTTGAGTTTCTCAGATCCATCCTGGA-GGACACGGACCCTGCCTGTCTCCCTTTTCTATGATGG---CATCTCCTCCTGCAGG--G------CTCTCCTG----------ACTCCCACTGGGAACCCCAATAACCAGGCTC-TG-CTCCACCAGGTCCATGGTGACCATAGGGGGTGGTAGAGAAGGCCCTAATATCGTCACATTCCCTGGCT---CCAGAtaaggattaaaatctcatgcccacaaagtgctcggtccagcatttggtgtatagtggatgctcagtaaaGACACAATGGC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61071635 262 - 77573801 ----------ATGCTTCCCCACTCCCCCTGCTCC-------------AAGCTGCCTCAGGAGATCCTCAAACCCAGACTGGAGGGACACTGG-----------------------TCTCAGCTCGCCTTCTCCTGGGGAGGGGGCCATCTCTCCTGGTGGTGGCACGTCCCT-GTGTAAGCTCTG-----CTGGCCCATTATCCCATCACCCCT--GCCTGACAAGTC---------------------CAGTTCCACGTTCTCTGATTCCACCAGACAAAAATTAAAACCACACAT-------------CCCATGATGTCTGA---ACACAGG-TGCCCAGTGAAGCCCATGT--- i canFam3.chr6 C 0 C 0 a score=357289.000000 s hg38.chr7_KI270899v1_alt 179014 45 + 190869 TCTCCTCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC-------------------ACCC s panTro5.chr7_NW_015973580v1_random 54351 44 - 83720 TCTCCTCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC--------------------CCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568920 45 + 162613886 TCTCCTCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC-------------------CCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 140348 45 - 432965 TCTCCTCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC-------------------CCCC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 202991 45 + 85365473 TCTCCCCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC-------------------CCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34049443 45 + 185818997 CCTCCTCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC-------------------CCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33667343 45 + 192294377 CCTCCTCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC-------------------CCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433898 45 - 9440265 CCTCCTCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC-------------------CCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023929 46 - 21915920 CCTCCTCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC------------------TCCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153651 35 - 21531802 CCTCCTCCTCCTGCCACCCAGTGCCCCAGCCC-----------------------------CCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 191031 45 - 2515279 CCTCCTCCTCCTGCCACCCAGAGCCCCAGCCTCCTCCCAGC-------------------ACCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 346311 50 + 6586416 CCTCCTCCTCCTGCCACCGAGAGCCCCAGCCTCCTCCCAGCCAC--------------CCCCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80759 64 + 138751 CCTCCTCCTCCTGCCACCCAAAACCCCAGCCTCCTCCCACCCCCAGCCCAGCTGCGCGCCCCCC i calJac3.chrUn_GL286444 C 0 I 5 s saiBol1.JH378296 393731 64 - 2409723 CCTCCTCCTCCTACCACCCAGAACCCCAGCCTCCTCCCACCCCCAACCCAGCTGTGTGCCCCCC i saiBol1.JH378296 C 0 I 15 s cebCap1.NW_016107703v1 554900 64 - 2125214 CCTCCTCCTCCTGCCACCCAGAACCCCAGCCTCCTCCCACCCCCAGCCCAGCTGTGACCCCCCC i cebCap1.NW_016107703v1 C 0 I 12 s otoGar3.GL873611 2282423 31 - 8137123 -TTGGCTCTCCTGCCTCCCAGAGCACCAGCCT-------------------------------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61071897 31 - 77573801 CCTGCTCCTCCT------------CCCTGCTGCCTGCCCGC-------------------CC-- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 147117 1525 + 376347 I a score=2143528.000000 s hg38.chr7_KI270899v1_alt 179059 190 + 190869 CCAGGCTCCCAGAATAGGCTACGGCCAGAGCTGGCCTGTGGTAAACAGCT-CGGAGCCT--CCGGGCAGGTCTTGGATGAGTAACCCTCAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGGGTGGGCCCCTCCAGCACCCCCACCTGGACCCTCCGCTGGGCCACTCCAGGCCAA s panTro5.chr7_NW_015973580v1_random 54395 190 - 83720 CCAGGCTCCCAGAATAGCCTACGGCCAGAGCTGGCCTGTGGTAAACAGCT-CGGAGCCT--CCAGGCAGGTCTTGGATGAGTAACCCTCAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGGGTGGGCCCCTCCAGCACCCCCACCTGGACCCTCCGCTGGGCCACTCCAGGCCAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 568965 190 + 162613886 CCAGGCTCCCAGAATAGCCTACGGCCAGAGCTGGCCTGTGGTAAACAGCT-CGGAGCCT--CCGGGCAGGTCTTGGATGAGTAACCCTCAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGGGTGGGCCCCTCCAGCACCCCCACCTGGACCCTCCGCTGAGCCACTCCAGGCCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 140393 189 - 432965 CCAGGCTCCCAGAATAGCCTACGGCCAGAGCTGGCCTGTGGTAAACAGCT-CGGAGCCT--CCGGGCAGGCCTTGGATGAGTAACCCTCAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGGGT-GGCCCCTCCAGCACCCCCACCTGGACCCTCTGCTGGGCCACTCCAGGCCAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 203036 191 + 85365473 CCAGGTTCCCAGAATAACCCGCGGCCAGAGCTGGCCTGTGGTAAACAGCTCCGGAGCCT--CCGGGTAGGTCTTGGATGAGTAATCCTTAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGTGTGGGACCCTCCAGCATCCCCACCTGGACCCTCCACTGGGCCACTCCAGGCCAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34049488 191 + 185818997 CCAGGCTCCCAGAATAGCCTGCGGCCAGAGCTGGCCTGTGGTAAACAGCTCCAGAGCCT--CTGGGTAGGTCTTGGATGAGTAATCCTTAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGTGTGGGCCCCTCCAGTGCCCCCACCCAGACCCTCCGCTGGGCCACTCCAGGCCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33667388 191 + 192294377 CCAGGCTCCCAGAATAGCCTGCGGCCAGAGCTGGCCTGTGGTAAACAGCTCCAGAGCCT--CTGGGTAGGTCTTGGATGAGTAATCCTTAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGTGTGGGCCCCTCCAGTGCCCCCACCCGGACCCTCCGCTGGGCCACTCCAGGCCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4433943 191 - 9440265 CCAGGCTCCCAGAATAGCCTGCGGCCAGAGCTGGCCTGTGGTAAACAGCTCCAGAGCCT--CTGGGTAGGTCTTGGATGAGTAATCCTTAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGTGTGGGCCCCTCCAGTGCCCCCACCCGGACCCTCCGCTGGGCCACTCCAGGCCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17023975 191 - 21915920 CCAGGCTCCCAGAATAGCCTGCGGCCAGAGCTGGCCTGTGGTAAACAGCTCCAGAGCCT--CTGGGTAGGTCTTGGATGAGTAATCCTTAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGTGTGGGCCCCTCCAGCGCCCCCACCCGGACCCTCCGCTGGGCCACTCCAGGCCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 153686 191 - 21531802 CCAGGCTCCCAGAATAGCCTGCGGCCAGAGCTGGCCTGTGGTAAACAGCTCCAGAGCCT--CTGGGTAGGTCTTGGATGAGTAATCCTTAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGTGAGGGCCCCTCCAGCGCCCCCACCCGGACCCTCCGCTGGGCCACTCCAGGCCAG i chlSab2.chr28 C 0 I 53 s manLeu1.NW_012101810v1 191076 191 - 2515279 CCAGGCTCCCAGAATAGCCTGCGGCCAGAGCTGGCCTGTGGTAAACAGCTCCAGAGCCT--CTGGGTAGGTCTTGGATGAGTAATCCTTAGCAAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGTGTGGGCCCCTCCAGCGCCCCCACCCGGACCCTCCGCTGGGCCACTCCAGGCCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 346361 191 + 6586416 CCAGGCTCCTAGAATAGCCTGCGGCCAGAGCTGGCCTGTGGTAAACAGCTCCAGAGCCT--CTGGGTAGGTCTTGGATGAGTGATTCTTAGCTAAACATCGTGGGATCCAGAAAGGTGCAGGTGCCAGGCCTGAGCTGTGAGGGCCCCTCCAGCGCCCCCACCCGGACCCTCCGCTGGGCCACTCCAGGCCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 80828 190 + 138751 CCAGGTTCCGAGAATAGCCTGCGGCCAGAGCTGGCCTGTGGTAAACAGTTCCGGAGCCT--CTGGGTAGGTCTTGGATGAGTAATCCTTAGCAAAACATTGCAGGATCCAGAAAGGTGCAGGTGCCAGCCCTGAGCTGTGA-GTCCCCTCCAGTACCCCCACCCGGACTTTCCACTGGGCCACTCCAGGCCAG i calJac3.chrUn_GL286444 I 5 C 0 s saiBol1.JH378296 393810 189 - 2409723 CCAGGTTCCCAGAATAGCCTGTGGCCAGAGCTGTCCTGTGGTAAACAGTTCCGGAGCCT--CCGGGTAGGTCTTGGATGAGTAATCCTTAGCAAAACATTGTGGGATCCAGAAAGGTGCAGGTGCCAGCCCTGAGCTGTGA-GGCCCCCCCAGCA-CCCCACCCGGACCTTCCGCTGGGCCACTCCAGGCCAG i saiBol1.JH378296 I 15 C 0 s cebCap1.NW_016107703v1 554976 185 - 2125214 CCAGGTTCCCAGAATAGCCTGCGGCCAGAGCTGTCCTGTGGTAAACAGTTCCGGAGCCT--CCGGGCAGGTCTTGGATGAGTAATCCTTAGCAAAACATTGTGGGATCCAGAAAGGTGCAGGTGCCAGCCCTGAGCTGTGA-GGCCCCTCCAGCA-C----CCTGGACCTTCTGCTGGGCCACTCCAGGCCAG i cebCap1.NW_016107703v1 I 12 C 0 s aotNan1.NW_018514293v1 148642 190 + 376347 CCAGGTTCCCAGAATAGCCTGCGGCCAGAGCTGGCCTGTGGTGAACAGTCCCGGAGCCT--CCGGGTAGGTCTTGGATGAGTGATCCTTAGCAAAACACTGTGGGATCCAGAAAGGTGCAGGTGCCAGCCCTGAGCTGTGA-GGCCCCTCCAGCACCCCCACCCGGACCTTCCGCTGGGCCAGGCCAGGCCAG i aotNan1.NW_018514293v1 I 1525 C 0 s otoGar3.GL873611 2282454 143 - 8137123 ------TCCCAGAATAGCCTGTGGGCAGAACTGGCTGGTGGTAAACAGCC-CAGAACCT--TGGGGTGGGTGCTGAATGAGTAAGTCTTAGGAAAATATCACCGGATTGGGTGGGGTGCAGGTGTCAGGCCTGAACTGTGTGGGCCTTTCTG----------------------------------------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61071928 169 - 77573801 -CCAGCTCCCAGAATAGCCTGTGGCCAAGGCTGGCCTGTGGTAAACAGCCCCAGAAGCTTCCTCAGTGGGTCCTGGATGAGTAATCCCTAGGAAAACATCGAAGGGTAT-GAGAGGTGTAGGTGCCAGGACCTAG-TGGGTGGGTCCCTCTGGGCCTCCCTCTTGCACCCTC--------------------- i canFam3.chr6 C 0 C 0 a score=253667.000000 s hg38.chr7_KI270899v1_alt 179249 65 + 190869 CGCATGGGTGGAGGTGCAGGGGGAAAGCCAGCTCTTGGGCTGCGGTGCCCGCCTCTGCCCCACC------------T s panTro5.chr7_NW_015973580v1_random 54585 65 - 83720 CGCATGGGTGGAGGTGCAGGGGGAAAGCCAGCTCTTGGGCTGCGGTGCCCGCCTCTGCCCCACC------------C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 569155 65 + 162613886 CGCATGGGTGGAGGTGCAGGGGGAAAGCCAGCTCTTGGGCTGCGGTGCCCGCCTCTGCCCCACC------------C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 140582 65 - 432965 CGCATGGGTGGAGGTGCAGGGGGAAAGCCAGCTCTTGGGCTGCGGTGCCCGCCTCTGCCCCACC------------C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 203227 77 + 85365473 GGCATGCGTGGAGGCGCAGGGGGAATGCCAGCTCTTGGGCTGTGGTGCCCGCCTCTGTCCCACCCCAGGAGGGCATC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34049679 42 + 185818997 -GCGTGAGTAGAGGCACAG----------------------GTGGTGCTCCCCTCTGTCCCATC------------C i rheMac8.chr3 C 0 I 12 s macFas5.chr3 33667579 42 + 192294377 -GCGTGAGTAGAGGCACAG----------------------GTGGTGCTCCCCTCTGTCCCATC------------C i macFas5.chr3 C 0 I 12 s macNem1.NW_012019910v1 4434134 42 - 9440265 -GCGTGAGTAGAGGCACAG----------------------GTGGTGCTCCCCTCTGTCCCATC------------C i macNem1.NW_012019910v1 C 0 I 12 s cerAty1.NW_012002954v1 17024166 42 - 21915920 -GCGTGAGTAGAGGCACAG----------------------GTGGTGCTCCCCTCTGTCCCATC------------C i cerAty1.NW_012002954v1 C 0 I 12 s manLeu1.NW_012101810v1 191267 42 - 2515279 -GCGTGAGTAGAGGCACAG----------------------GTGGTGCTCCCCTCTGTCCCATC------------C i manLeu1.NW_012101810v1 C 0 I 12 s colAng1.NW_012117710v1 346552 42 + 6586416 -GCGTGAGTAGAGGCACAG----------------------GTGGTGCTCCCCTCTGCCCCATC------------C i colAng1.NW_012117710v1 C 0 I 12 s calJac3.chrUn_GL286444 81018 51 + 138751 -GTGTGGGTGGAGGTGCAGGGGGATCTCCA-------------GGTGCTCTCCTCTGTCCCACC------------C i calJac3.chrUn_GL286444 C 0 I 12 s saiBol1.JH378296 393999 51 - 2409723 -GCTCGGGTGGAGATGCAGGGGGATCTCCA-------------GGTGCTCTCCTCTGTCCCACC------------C i saiBol1.JH378296 C 0 I 12 s cebCap1.NW_016107703v1 555161 51 - 2125214 -GTGTGGGTGGAGATGCAGGAGGATCTCCA-------------GGTGCTCTCCTCTGTCCCACC------------C i cebCap1.NW_016107703v1 C 0 I 12 s aotNan1.NW_018514293v1 148832 51 + 376347 -GCGAGGGTGGAGATGCAGGGGGATCTCCA-------------GGTGCTCTCCTCTGTCCCACC------------C i aotNan1.NW_018514293v1 C 0 I 12 s otoGar3.GL873611 2282597 10 - 8137123 ----------------------------------------------------CTCTG---CACT------------C i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072097 0 - 77573801 C e chlSab2.chr28 153877 53 - 21531802 I a score=1548756.000000 s hg38.chr7_KI270899v1_alt 179314 177 + 190869 CAGGAGGCTGGGACGTCCCCGATCTGTGTGGGAAAGAAAA-CCCGTCATCCTGTTGCTGATGGGGCCTCAGCGAGTCGTGGGGGGCCCCTGGGAGGAGGTGGGAGGCACATAAAGCTCCATCTGCTCGTGGACTGCACACTCC-CTGGCCACAGCTCCCAGGA-GGGCT----------TTCTCCTCCAC s panTro5.chr7_NW_015973580v1_random 54650 177 - 83720 CAGGAGGCTGGGACGTCCCCGATCTGTGTGGGAAAGAAAA-CCCGTCATCCTGTTGCTGATGGGGCCTCAGCGAGTCGTGGGGGGCCCCTGGGAGGAGGTGGGAGGCACGTAAAGCTCCATCTGCTCGTGGACTGCACACCCC-CTGGCCACAGCTCCCAGGA-GGGCT----------TTCTCCTCCAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 569220 177 + 162613886 CAGGAGGCTGGGACGTCCCCGATCTGTGTGGGAAAGAAAA-CCCGTCATCCTGTTGCTGATGGGGCCTCAGCGAGTCGTGGGGGGCCCCTGGGAGGAGGTGGGAGGCACGTAAAGCTCCATCTGCTCGTGGACTGCACACCCC-CTGGCCACAGCTCCCAGGA-GGGCT----------TTCTCCTCCAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 140647 176 - 432965 CAGGAGGCTGGGACGTCCCCAATCTGTGTGGGAAAGAAAA-CCCGTCATCCTGTTGCTGATGGGGCCTCAGCGAGTCGT-GGGGGCCCCTGGGAGGAGGTGGGAGGCACATAAAGCTCCATCTGCTCGTGGACTGCACACCCC-CTGGCCACAGCTCCCAGGA-GGGCT----------TTCTCCTCCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 203304 178 + 85365473 CAGGAGGCTGGGACGTCCCCGATCTGTGTGGGAAGGAAAA-CCCGTCATCCTGTTGCTGATGGGGCCTCAGCGAGTCGTGGGGGGCCCCTGGGAGGAGGTGGGAGGCACATAAAGCTCCATCTGCTCGTGAACTGCACACCCCTCTGGCCACAGCTCCCAGGA-GGGCT----------TTCTCCTCCAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34049733 177 + 185818997 CAGGAGGCTGGGACGTCCCCCATCCATGTGGGAAGGAAAA-CCCGCCATCCGGTTGCTGATGGGGCCTCAGGGCATTGTGGGGGGCCCCTGGGAGGAGGTGGGAGGCACATAAAACTCCATCTGCGGGTGGACTGCACACCCCTCTGGCCACAGCCCCCAGGA--GGCT----------TTCTCCTCCAC i rheMac8.chr3 I 12 C 0 s macFas5.chr3 33667633 177 + 192294377 CAGGAGGCTGGGACGTCTCCCATCCATGTGGGAAGGAAAA-CCCGCCATCCGGTTGCTGATGGGGCCTCAGGGCGTTGTGGGGGGCCCCTGGGAGGAGGTGGGAGGCACATAAAACTCCATCTGCGGGTGGACTGCACACCCCTCTGGCCACAGCCCCCAGGA--GGCT----------TTCTCCTCCAC i macFas5.chr3 I 12 C 0 s macNem1.NW_012019910v1 4434188 177 - 9440265 CAGGAGGCTGGGACGTCCCCCATCCATGTGGGAAGGAAAA-CCCGCCATCCGGTTGCTGATGGGGCCTCAGGGCGTTGTGGGGGGCCCCTGGGAGGAGGTGGGAGGCACATAAAACTCCATCTGCGGGTGGACTGCACACCCCTCTGGCCACAGCCCCCAGGA--GGCT----------TTCTCCTCCAC i macNem1.NW_012019910v1 I 12 C 0 s cerAty1.NW_012002954v1 17024220 177 - 21915920 CAGGAGGCTGGGACGTCCCCCATCCATGTGGGAAGGAAAA-CCCACCATCCTGTTGCTGATGGGGCCTCAGGGCGTTGTGGGGGGCCCCTGGGAGGAGGTGGGAGGCACATAAAACTCCATCTGCGGGTGGACTGCACACCCCTCTGGCCACAGCCCCCAGGA--GGCT----------TTCTCCTCCAC i cerAty1.NW_012002954v1 I 12 C 0 s chlSab2.chr28 153930 157 - 21531802 CAGGAGGCTGGGAGGTCCCCCATCCACGTGGGAAGGAAAA-CCTGCCATCCTGTTGCTGATGGGGCCTCAGGGAGTCGTGGGGGGCCCCTGGCAGGAGGTGGGAGGCACATAAAACC--------------------CACCCCTCTGGCCACAGCCCCCAGGA--GGCT----------TTCTCCTCCAC i chlSab2.chr28 I 53 C 0 s manLeu1.NW_012101810v1 191321 177 - 2515279 CAGGAGGCTGGGACGTCCCCCATCCATGTGGGAAGGAAAA-CCCGCCATCCTGTTGCTGATGGGGCCTCAGGGCGTTGTGGGGGGCCCCTGGGAGGAGGTGGGAGGCACATAAAACTCCATCTGCAGGTGGACTGCACACCCCTCTGGCCACAGCCCCCAGGA--GGCT----------TTCTCCTCCAC i manLeu1.NW_012101810v1 I 12 C 0 s colAng1.NW_012117710v1 346606 177 + 6586416 CAGGAGGCTGGGACGTCCCCCATCTGCGTGGGAAGGAAAA-CCCACCATCCTGTTGCTGATGGGGCCTCAGGGAGTCATGGCGGGCCCCTGGCAGGAGGTGGGAGGCACATAAAACTCCATCTGCTGGTGGACTGCACACCCCTCTGGGCACAGCCCCCAGGA--GGCT----------TTCTCCTCCAC i colAng1.NW_012117710v1 I 12 C 0 s calJac3.chrUn_GL286444 81081 176 + 138751 TGGAAGGCTGAGACGTCCCCCATCCATGTGGGAAGGAAAG-CCCGTCATCTTGTAGCTGATGGGGCCTCAGCAAGACGT-GAGGGCCTCTGGGGGGAGGCAGGAGGCACGTAAAGCCCTGTCTGCTTGTGGACTGAGTATCCT-CCCGCCACAGCTCCCGGGA-TGACT----------TTCTCCTCCAT i calJac3.chrUn_GL286444 I 12 I 10 s saiBol1.JH378296 394062 176 - 2409723 CAGAAGGCTGAGACGTCCCCCATCCGTGTGGGAAGGAAAG-CCTATCATCCTGTAGCTGATTGGGCCTCAGCAAGACGC-AGGGGCCTCTGGGGGAGGGCAAGAGGCACATAAAGCCCCGTCTGCTCATGGACTGAGTACCCT-CCAGCCACAGCTCCCAGGA-TGGCT----------TTCTCCTCCAT i saiBol1.JH378296 I 12 I 10 s cebCap1.NW_016107703v1 555224 176 - 2125214 CAGAAGGCTGAGACATTCCCCATCCATGTGGGAAGGAAAG-CCCATCATCCTATAGCTGATGGGGCCTCAGCAAGACGT-GGGGGCCTCTGGGGGGAGGCAGGAGGCACATAAAGCCCTGTCTGCTCATGGACTGAGTACCCT-CCGGCCACAGCTCCCAGGA-TGGCT----------TTCTCCTCCAG i cebCap1.NW_016107703v1 I 12 C 0 s aotNan1.NW_018514293v1 148895 172 + 376347 CAGAAGGCTGAGACGTCCTCCGTCCATGTGGGAAAGAAAGCCCCGTCATCCCATAGCTGATGGGGCCTCAGCAAGATGT-GGGGGCCTCTGGGGGGAGGTAGGAGGCACGTAAAGCCCCGTCTGCTCATGGACTGAGTACCCT-CCGGGCACGGCTCCCAGGA-TGGCT----------TTCTCC----- i aotNan1.NW_018514293v1 I 12 I 2 s otoGar3.GL873611 2282607 150 - 8137123 AAGGGCCCTGGGA-----------TACTTGGGCAGGAAAG-CCTGTCATC-AGCAGCTGATGGGCCCTTGGCAAGGC---CGGAGGCACAGGGCGGATCTGGGGTG---ACAAAGCCT-------------------CTCCCTCTAAGACGTGGCT-CCAGGA-TGCCTGAGTTCTAGCTCCTCCTCCTA i otoGar3.GL873611 C 0 I 2 s canFam3.chr6 61072097 83 - 77573801 -------CTGGAATGTTCTCTAGTCATTTGGGCAGGAAAA-CCTGTCATCCTCCC-CTGATGGG-----------------------CCTGG------------------------------------------------------------AGCTTCCAGGACAGTCT----------TTCTCC----- i canFam3.chr6 C 0 C 0 a score=5947.000000 s hg38.chr7_KI270899v1_alt 179491 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 54827 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 569397 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 140823 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 203482 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34049910 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33667810 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4434365 1 - 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17024397 1 - 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 154087 1 - 21531802 G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 191498 1 - 2515279 G i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 346783 1 + 6586416 G i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 555400 1 - 2125214 G i cebCap1.NW_016107703v1 C 0 I 41 s canFam3.chr6 61072180 1 - 77573801 A i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2282757 2 - 8137123 I e aotNan1.NW_018514293v1 149067 2 + 376347 I e saiBol1.JH378296 394238 10 - 2409723 I e calJac3.chrUn_GL286444 81257 10 + 138751 I a score=69994.000000 s hg38.chr7_KI270899v1_alt 179492 14 + 190869 CCATCACGCACCCC------- s panTro5.chr7_NW_015973580v1_random 54828 14 - 83720 CCATCACGCACCCC------- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 569398 14 + 162613886 CCATCACGCACCCC------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 140824 14 - 432965 CCATCACGCAGCCC------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 203483 14 + 85365473 CCATCACGCACCCC------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34049911 14 + 185818997 CCATCACACACCCC------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33667811 14 + 192294377 CCATCACACACCCC------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4434366 14 - 9440265 CCATCACACACCCC------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17024398 14 - 21915920 CCATCACACACCCC------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 154088 14 - 21531802 CCATCACACACCCC------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 191499 14 - 2515279 CCATCACACACCCC------- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 346784 14 + 6586416 CCATCACACACCCC------- i colAng1.NW_012117710v1 C 0 C 0 s aotNan1.NW_018514293v1 149069 10 + 376347 GGAGGAGGAG----------- i aotNan1.NW_018514293v1 I 2 C 0 s otoGar3.GL873611 2282759 14 - 8137123 CCATCATGTGTCCC------- i otoGar3.GL873611 I 2 C 0 s canFam3.chr6 61072181 14 - 77573801 -------GCAGCTCTGTCTCT i canFam3.chr6 C 0 C 0 e saiBol1.JH378296 394238 10 - 2409723 I e cebCap1.NW_016107703v1 555401 41 - 2125214 I e calJac3.chrUn_GL286444 81257 10 + 138751 I a score=265329.000000 s hg38.chr7_KI270899v1_alt 179506 33 + 190869 AAACTTTATGGCCCAGCA--TCCCTTTCCCACCCT s panTro5.chr7_NW_015973580v1_random 54842 33 - 83720 AAACTTTATGGCCCAGCA--TCCCTTTCCCACCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 569412 33 + 162613886 AAACTTTATGGCCCAGCA--TCCCTTTCCCACCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 140838 33 - 432965 AAACTTTATGGCCCAGCA--TCCCTTTCCCACCCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 203497 30 + 85365473 AAACTTTATGGCCCAGCA--TCTCTTTCCCAC--- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34049925 33 + 185818997 AAACTTTGTGGCCCAGCA--TCTCTCTCCCACCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33667825 33 + 192294377 AAACTTTGTGGCCCAGCA--TCTCTCTCCCACCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4434380 33 - 9440265 AAACTTCGTGGCCCAGCA--TCTCTCTCCCACCCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17024412 33 - 21915920 AAACTTTGTGGCCCAGCA--TCTCTCTCCCACCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 154102 33 - 21531802 AAACTTTGTGGCCCAGCG--TCTCTCTCCCACCCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 191513 33 - 2515279 AAACTTTGTGGCCCAGCA--TCTCTCTCCCACCCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 346798 35 + 6586416 AAACTTTATGGCCCAGCATCTCTCTCTCCCACCCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 81267 31 + 138751 AAACTTGATGTCCCAGCA----TCTTTCCCACCCT i calJac3.chrUn_GL286444 I 10 C 0 s saiBol1.JH378296 394248 32 - 2409723 AAACTTGATGTCCCAGCA--TCTCTTTCCCACCC- i saiBol1.JH378296 I 10 C 0 s aotNan1.NW_018514293v1 149079 33 + 376347 AAACTCGATGTCCCAGCA--TCCCTTTCCCACCCT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2282773 18 - 8137123 --------------AAAG--TCACT-TCCCACCTT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61072195 30 - 77573801 TCACCTCATTGCACAGCC-----CCCTCCCGCCCT i canFam3.chr6 C 0 C 0 e cebCap1.NW_016107703v1 555401 41 - 2125214 I a score=2339656.000000 s hg38.chr7_KI270899v1_alt 179539 269 + 190869 TGTCCATA-CATCGCGGTGCCCCCTTCACAGAGAAGCGTTGCATGAGTTCCTTCAGTTCTGTTCCAATATCCCCTGCGCAGCCATG--CAGACAGGCTTCCTTCTTTCCCCTTCTTGCGCGAGCGACACGGCT--------------CTACACGTCCTCTTATACCTCGC--TACTTACGCACGGCGGCCTCTTTCTCCTGGGAAGATCAGTGGCGGCTCCAGCCAGGCCAGCT--------------------GGCAGCTCAGGGCTCAGGCGCTGGCTCATCTGAG-------GAGCCCTGGGCTCC------------------AACCAG s panTro5.chr7_NW_015973580v1_random 54875 269 - 83720 TGTCCATA-CATCGCGGTGCCCCCTTCACAGATGAGCATTGCATGAGTTCCTTCAGTTCTGTTCCAATATCCCCTGCGCAGCCATG--CAGACGGGCTTCCTTCTTTCCCCTTCTTGCACGAGCGACACGGCT--------------CTACGCGTCCTCTTACACCTCGC--TACTTACCCACGGCGGCCTCTTTCTCCTGGGAAGATCAGTGGCGGCTCCAGCCAGGCCAGCT--------------------GGCAGCTCAGGGCTCAGGCGCTGGCTCATCTGAG-------GAGCCCTGGGCTCC------------------AACCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 569445 269 + 162613886 TGTCCATA-CATCGCGGTGCCCCCTTCACAGATGAGCATTGCATGAGTTCCTTCAGTTCTGTTCCAATATCCCCTGCGCAGCCATG--CAGACAGGCTTCCTTCTTTCCCCTTCTTGCACGAGCGACACGGCT--------------CTACGCGTCCTCTTACACCTCGC--TACTTACGCACGGCGGCCTCTTTCTCCTGGGAAGATCAGTGGCGGCTCCAGCCAGGCCAGCT--------------------GGCAGCTCAGGGCTCAGGCGCTGGCTCATCTGAG-------GAGCCCTGGGCTCC------------------AACCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 140871 269 - 432965 TGTCCATA-CATCGCGGTGCCCCCTTCACAGATGAGCGTTGCATGAGTTCCTTCAGTTCTGTTCCAATATCCCCTGCGCAGCCATG--CAGACAGGCTTCCTTCTTTCCCCTTCTTGCACGAGCGACACGGCT--------------CTACGCTTCCTCTTACACCTGGC--TACTTACGCACAGCGGCCTCTTTCTCCTGGGAAGATCAGTGGAGGCTCCAGCCAGGCCAGCT--------------------GGCAGCTCAGGGCTCAGGCGCTGGCTCATCTGAG-------GAGCCCTGGGCTCC------------------AGCCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 203527 266 + 85365473 ---CTATG-CATCGCAGTGCCCCCTTCACAGATGAGCGTTGCATGAGCTCCTTCAGTTCTGCTCCAATATCCCCTGCGCAGCCACG--CAGACGGGCTTCCTTCTGTCCCCTTCGTACACGAGCGACACGGCT--------------CTGCGCTTCCTCTTATCCCTCGC--TACTTAAGCACAGCGGCCTCTTTCTCCCAGGAAGATCAGTGGAGGCTCCAGCCAGGCCAGCT--------------------GGCAGCTCAGGGCTCAGGCGCTGGCTCATCGGAG-------GAGCCCTGGGCTCC------------------AACCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34049958 253 + 185818997 TGTCCATA-CATTGTGGTGCACCCTTCGCAGACGAGCACTGCGTGAGTTCCTTCAGTTCTCTTCCAACATCCCCTGCGCAGCCATT--CAGACAGGCTTCCTTCTCTCCCCTTCTTACCCGAGTGGCACGGCT--------------CTGTGCTTCCTCTCACACCTCAC--TACTTACGCACAGCAGCCTCCTTCTCCTGGG----------------TCAGCCAGGCCAGCT--------------------GGCTGCTCAGGGCTCAGGCGTTGGCTCCTCTGAG-------GAGTCCTGGGCTCC------------------GACCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33667858 253 + 192294377 TGTCCATA-CATTGTGGTGCACCCTTCGCAGACGAGCACTGCGTGAGTTCCTTCAGTTCTCTTCCAACATCCCCTGCGCAGCCATT--CAGACAGGCTTCCTTCTCTCCCCTTCTTACCCGAGTGGCACGGCT--------------CTGTGCTTCCTCTCACACCTCAC--TACTTACGCACAGCGGCCTCCTTCTCCTGGG----------------TCAGCCAGGCCAGCT--------------------GGCTGCTCAGGGCTCAGGCATTGGCTCCTCTGAG-------GAGTCCTGGGCTCC------------------GACCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4434413 253 - 9440265 TGTCCATA-CATTGTGGTGCACCCTTCGCAGACGAGCACTGCGTGAGTTCCTTCAGTTCTCTTCCAACATCCCCTGCGCAGCCATT--CAGACAGGCTTCCTTCTCTCCCCTTCTTACCCGAGTGGCACGGCT--------------CTGCGCTTCCTCTCACACCTCAC--TACTTACGCACAGCGGCCTCCTTTTCCTGGG----------------TCAGCCAGGCCAGCT--------------------GGCTGCTCAGGGCTCAGGCGTTGGCTCCTCTGAG-------GAGTCCTGGGCTCC------------------GACCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17024445 253 - 21915920 TGTCCATA-CATTGTGGTGCACCCTTCACAGACGAGCACTGCGTGACTTCCTTCAGTTCTCTTCCAACATCCCCTGCGCAGCCATT--CAGACAGGCTTCCTTCTCTCCCCTTCTTACCCAAGTGGCACGGCT--------------CTGTGCTTCCTCTCACACCTCAC--TACTTACGCACAGCGGCCTCCTTCTCCTGGG----------------TCAGCCAGGCCAGCT--------------------GGCTGCTCAGGGCTCAGGCGTTGGCTCCTCTGAG-------GAGTCCTGGGCTCC------------------AAACAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 154135 253 - 21531802 TGTCCATA-CATTGTGGTGCACCCTTCACAGACGAGCGCTGCGTGAGTTCCTTCAGTTCTCTTCCAACATCCCCTGCGCAGCCATT--CAGACAGGCTTCCTTCTCTCCCCTTCTTACCCGAGCGGCACGGCT--------------CTGCGCTTCCTCTCACACCTCGC--TACTTATGCACAGCGGCCTCCTTCTCCCGGG----------------TCAGCCAGGCCAGCT--------------------GGCCGCTCAGGGCTCAGGCGTTGGCTCCTCTGAG-------GAGTCCTGGGCTCC------------------GACCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 191546 253 - 2515279 TGTCCATA-CATTGTGGTGCACCCTTCGCAGACGAGCACTGCGTGAGTTCCTTCAGTTCTCTTCCAACATCCCCTGCGCAGCCATT--CAGACAGGCTTCCTTCTCTCCCCTTCTTACCCAAGTGGCACGGCT--------------CTGCGCTTCCTCTCACACCTCAC--TACTTACGCACAGCGGCCTCCTTCTCCTGGG----------------TCAGCCAGGCCAGCT--------------------GGCTGCTCAGGGCTCAGGCGTTGGCTCCTCTGAG-------GAGTCCTGGGCTCC------------------GACCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 346833 253 + 6586416 CGTCCATA-CATTGTGGTGCACCCTTCATAGACGAGCACTGCGTGAGTCCCTTCAGTTCTCTCCCAATATCCCCTGAGCAGCCATT--GAGACAGGCTTCCTTCTTTCCCCTTCGTACACCAGCAGCACGGCT--------------CTGCGCTTCCTCTCACACCTCAC--TACTTACGCACAGCGGCCTCCTTCTCCTGGG----------------TCAGCCAGGCCAGCT--------------------GGCAGCTCAGGGCTCAGGCGCTGGCTCCTCTGAG-------GAGTCTTGGGCTCC------------------AACCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 81298 270 + 138751 TGTCCACACCATCCCAGTGCCCACTTCACGGATGAGCATTTCGTGAGTTCCTTCGGTTCTGTTCCGATAGCCTCCATGCAGCCATT--TAGACAGGCTTCCTTCTTTCCCCTCCTTACATGGGTGGCACCACT--------------CTGCGCTTCCTCTCACACCTTGC--TATTTACTCATGGTGGCCTGTTTCTCCTGGGAAGATTAGCAGTGGTTCCATCTAGGCTGGCT--------------------GGCAGCTCAGGGCTCAGGCTTTGGCTCATCTGAG-------GAGCCCTGGGCTCC------------------AACCAG i calJac3.chrUn_GL286444 C 0 I 17 s saiBol1.JH378296 394280 270 - 2409723 TGTCCACACCATCCTGGTACCCACTTCACGGATGAGCACTGCGTGAGTTCCTTCAGTTCTGTTCCGATGGCCCCTGTGCAGCCATT--TAGACAGGTTTCCTTCTTTCCCCTCCTTACACGGGTGGCACGACT--------------CCACGCGTCCTGTCACACCTCGC--TATTTACTCATGGTGGCCTGTTTATCCTGGGAAGATCAGCAGTGGTTCCAGCCAGGCTGGCT--------------------GGCAGCTCAGGGCTCAGGCTCTGGCTCATCTGAG-------GAGCCCTGGGCTCC------------------AACCAG i saiBol1.JH378296 C 0 I 17 s cebCap1.NW_016107703v1 555442 269 - 2125214 TGTCCACACCATCCT-GTACCCACTTCACGGATGAGCATTGCATGAGTTCCTTCAGTTCTGTTCCAATAGCCCCTATGCAGCCATT--TAGACAGGCTTCCTTCTTGCCCCTCCTTACACGGGTGGCACCACT--------------CTGCGCTTCCTCTCACACCTCGA--TATTTACCCATGGTGGCCTGTTTATCCTGGGAAAATCAGCGGTGGTTCCAGCCAGGCTGGCT--------------------GGCAGCTCAGGGCTCAGGCTTTGGCTCATCTGAA-------GAGCCCTGGGCTCC------------------AACCAG i cebCap1.NW_016107703v1 I 41 I 17 s aotNan1.NW_018514293v1 149112 269 + 376347 TGTCCAAACCATCCAGGTACCCACTTCACGGACGAGCACTGCGTGAGTTCCTTCAGTTCTGTTCCGAGAGCCCCTGTGCAGCCGTT--TAGACAGGCTTCCTTCTT-CCCCTCCTTACACGGGTGGCACCGCT--------------CTGTGCTTCCTCTGTCACCTCCC--TATTTACTCACGGTGGCCTGTTTCTCCTGGGAAGATCGGCGGTGGTTCCAGCCAGGCTGGCT--------------------GGCAGCTCAGGGCTCAGGCTTTGGCTCATCTGAG-------GAGCCCTGGGCTCC------------------AACCAG i aotNan1.NW_018514293v1 C 0 I 55 s otoGar3.GL873611 2282791 256 - 8137123 CATCTGTA--------------CCCCCATGTTTGACCACTGCATTCACTTCTCCAGTGCTTCTCCAATATCCCCTGGGCCACTGTCCACAGACGTGCTTCCCT-TCTCTTCCTCACATAAGGGCAGCACAGTG------------------ACCACTGCTTTCACCTTCT--TGCTGGCCCATG--AGCAGCTTTCTTTTAGAAATATCAGTGGGTCCCCCAGA-AGGCTGGCT--------------------GGGGGCT------------GTGGGCTCATTTGAG-------GAGGCCTGTGCTTTGCCCTGGACTCAGAAGAGGACCAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61072225 267 - 77573801 ----TCTT-CCTTGTGGTGGGGGCTCCA-----------TGTCAAGGTGACCGCCGTACTGACCCG-----CCCT------CCATC--TACACCGCCCTCCATCCCTC--------ACACAACCGTCACCATTATGCCTGTCCTACACTGCCGCTCTTCTTGGACCTCACCTCAGTCACCCACAGGAGCC-CTGTATCCATGGTGGTTC----------TCAGCCAGGCCAGCTGTGGCTTCCCACAGCCAGGGGGATGTTCAGGGTGCGAGGCTCACCTCCTCTGTGCCTTAACCAGGACTGAGGACT------------------GACTGG i canFam3.chr6 C 0 C 0 a score=311787.000000 s hg38.chr7_KI270899v1_alt 179808 41 + 190869 CTGCTGGGCAACGCTGGGAC-GACAACCTCTC--CTGTCCTAAA s panTro5.chr7_NW_015973580v1_random 55144 41 - 83720 CTGCTGGGCAATGCTGGGAC-GACAACGTCTC--CTGTCCTAAA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 569714 41 + 162613886 CTGCTGGGCAATGCTGGGAC-GACAACCTCTC--CTGTCCTAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 141140 41 - 432965 CTGCTGGGCAATGCTGGGAT-GACAACCTCTC--CTGTCCTAAA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 203793 41 + 85365473 CTGCTGGGCGACGCTGGGGC-GACAACCTCTC--CTGTCCTAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34050211 41 + 185818997 CTGTTGGGCAACGCCGGGAC-GACAGCCTCTC--CTGTCTTAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33668111 41 + 192294377 CTGTTGGGCAACGCCAGGAC-GACAGCCTCTC--CTGTCTTAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4434666 41 - 9440265 CTGTTGGGCAACGCCAGGAC-GACAGCCTCTC--CTGTCTTAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17024698 41 - 21915920 CTGCTGGGCAACGCCGGGAC-GACAGCCTCTC--CTGTCTTAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 154388 41 - 21531802 CTGCTGGGCAACGCCGGGAC-GACCGCCTCTC--CTGTGTTAAA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 191799 41 - 2515279 CTGCTGGGCAATGCCGGGAC-GACAGCCTCTC--CTGTCTTAAA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 347086 41 + 6586416 CTGCTGGGCAACACCGGGAC-GACAGCCTCTC--CTGTCTTAAA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 81585 42 + 138751 CTGCCAGGTGACACTGGGACAGACAGCCTCTC--TTGCTCTAAA i calJac3.chrUn_GL286444 I 17 C 0 s saiBol1.JH378296 394567 42 - 2409723 CTGCCAGGTGGCACTGGGACAGACAGCCTCTC--TTGCTCTAAA i saiBol1.JH378296 I 17 C 0 s cebCap1.NW_016107703v1 555728 42 - 2125214 CTGCCAGGTGACATTGGGACAGACAGCCTCTC--TTGCTCTAAA i cebCap1.NW_016107703v1 I 17 C 0 s otoGar3.GL873611 2283047 43 - 8137123 CTGGTGGGGTCAGCCCGTAT-ACACATTTCTCAGCTGCTCTTCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61072492 39 - 77573801 CCGCTGGGGGAATCTGGGCA-GA---CTTCTCGGCTGCCCTAA- i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 149381 55 + 376347 I a score=3465267.000000 s hg38.chr7_KI270899v1_alt 179849 365 + 190869 GGGCAGGAGGTACTGCGGCTTCTTCCCCTGCCAC--AGTCCCAGGGACCTGACGG--GGACACTCAGAGACTCTGTCTCTG----CCT---CCTGTGC---GGGGTCATGCT------CTGCCTGGAAAGCGCCTCCTTCCTTCCTGGCCCATTGGGAAATCGCAGTGT---CCTCTGG-CCGGTCCCAGCACCCCCGGGTGGGACCCCAGCGACCCTGCA---CCCCCCCACTGCAGCC-------GTCTCCCTCCTCCTGGCAGGGCAGCTGCCAAGCCTTGCCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------CAGCTGTTCCCCC-ACTCCCAGAGTGTCCTCAGAGAACCCCTTCCAGACCCCAAGCTCCAGAGCTC s panTro5.chr7_NW_015973580v1_random 55185 370 - 83720 GGGCAGGAGGTACTGCGGCTTCTTCCCCTGCCAC--AGTCCCAGGGACCTGACGG--GGACACTCAGAGACTCTGTCTCTG----CCT---CCTGTGC---GGGGTCATGCT------CTGCCTGGAAAGCGCCTCCTTCCTTCCTGGCCCATTGGGAAATCGCAGTGTG-TCCTCTGG-CCGGTCCCAGCACCCCCGGGTGGGACCCCAGCGACCCTGCA---CCCCCCCACTGCAGCCC-----TGTCTCCCTCCTCCTGGCAGGGCAGCTGCCAAGCCTTGCCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------CAGCTGTTCCCCCCACTCCCAGAGTGTCCTCAGAGAACCCCTTCCAGACCCCAAGCTCCAGAGCTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 569755 370 + 162613886 GGGCAGGAGGTACTGCGGCTTCTTCCCCTGCCAC--AGTCCCAGGGACCTGACGG--GGACACTCAGAGACTCTGTCTCTG----CCT---CCTGTGC---GGGGTCATGCT------CTGCCTGGAAAGCGCCTCCTTCCTTCCTGGCCCATTGGGAAATCGCAGTGTG-TCCTCTGG-CCGGTCCCAGCACCCCCGGGTGGGACCCCAGCGACCCTGCA---TCCCCCCACTGCAGCCC-----TGTCTCCCTCCTCCTGGCAGGGCAGCTGCCAAGCCTTGCCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------CAGCTGTTCCCCCCACTCCCAGAGTGTCCTCAGAGAACCCCTTCCAGACCCCAAGCTCCAGAGCTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 141181 368 - 432965 GGGCAGGAGGTACTGCGGCTTCTT-CCCTGCCAC--AGTCCCAGGGACCTGACGG--GGACACTCAGAGACTCTGTCTCTG----CCT---CCTGTGC---GGGGTCATGCT------CTGCCTGGAAAGCGCCTCCTTCCTTCCTGGCCCACTGGGAAATCGCAGTGTG-TCCTCTGG-CCAGTCCCAGCACCCCCGGGTGGGACCCCAGCGACCCTGCA---CCCCCCCACTGCAGCCC-----TGTCTCCCTCCTCCTGGCAGGGCAGCTGCCAAGCCTTGTCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------GAGCTGTTCCCCCCACTCCCAGAGTGTCCTCAGAGAACCCC-TCCAGACCCCACGGTCCAGAGCTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 203834 368 + 85365473 GGGCAGGAGGTACTGCAGCTTCTTCCCCTGCCAC--AGTCCCAGGGACCTGACGG--GGACACTCAGAGA--CTGTCTCTG----CCT---CCTGTGC---GGGGTCGTGCT------CTGCCTGGAAAGCCCCTCCTTCCTTCCCGGCCCATTGGGAAATCGCAGTGTG-TCCTCTGG-CCGGTCCCAGCACCCCCGGGTGGGACCCCAGCGACCCTGCA---CCCCCCCACTGCAGCCC-----TGTCTCCCTCCTCCTGGCAGGGCAGCTGCCAAGCCTTGCCCAGTCCAGGTCTC-----CCCAGGCAGGAACCCTTGGG-AGAAACCTGAGGAGG-----------------CAGCTGTTCCCCCCACTCCCAGAGTGTCCTCAGAGAACCCCTTTCAGACCCCAAGGTCCAGAGCTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34050252 360 + 185818997 GGGCAGGAGGTACTGCGGCTTCTTCCCCTGCCAC--AGCCCCAGGGACCCGACGG--GGAC--------ACTCTGCCTCTG----CCT----CTGTGC---GGGGTCATGCT------CTGCCTGGAAAGCTCCTCCTTCCTTCCTGGCCCATTGGAAAATCGCCATGTG-TCCTCTGG-CCAGTCCCAGCACCCCCAGGTGGGACCCTAGCAACCCTGCA----CCTCCCACTGCAGCCC-----TGTCTCCCTCCTCCTCGCAGGGCAGCTGCCAAGCCTCACCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------CAGCTGTTTCCCCCACCCCCCAAGTGTCCTCAGAGAACCCCTTCCAGACCCCAAAGTCCAGAGCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33668152 359 + 192294377 GGGCAGGAGGTACTGCGGCTTCTTCCCCTGCCAC--AGCCCCAGGGACCCGACGG--GGAC--------ACTCTGCCTCTG----CCT----CTGTGC---GGGGTCATGCT------CTGCCTGGAAAGCTCCTCCTTCCTTCCTGGCCCATTGGAAAATCGCCATGTG-TCCTCTGG-CCAGTCCCAGCA-CCCCAGGTGGGACCCTAGCAACCCTGCA----CCTCCCACTGCAGCCC-----TGTCTCCCTCCTCCTCGCAGGGCAGCTGCCAAGCCTCACCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------CAGCTGTTTCCCCCACCCCCCAAGTGTCCTCAGAGAACCCCTTCCAGACCCCAAAGTCCAGAGCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4434707 360 - 9440265 GGGCAGGAGGTACTGCGGCTTCTTCCCCTGCCAC--AGCCCCAGGGACCCGACGG--GGAC--------ACTCTGCCTCTG----CCT----CTGTGC---GGGGTCATGCT------CTGCCTGGAAAGCTCCTCCTTCCTTCCTGGCCCATTGGAAAATCGCCATGTG-TCCTCTGG-CCAGTCCCAGCACCCCCAGGTGGGACCCTAGCAACCCTGCA----CCTCCCACTGCAGCCC-----TGTCTCCCTCGTCCTCGCAGGGGAGCTGCCAAGCCTCACCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------CAGCTGTTTCCCCCACCCCCCAAGTGTCCTCAGAGAACCCCTTCCAGACCCCAAAGTCCAGAGCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17024739 360 - 21915920 GGGCAGGAGGTACTGCAGCTTCTTCCCCTGCCAC--AGCCCCAGGGACCCGACGG--GGAC--------ACTCTGCCTCTG----CCT----CTGTGC---GGAGTCATGCT------CTGCCTGGAAAGCTCCTCCTTCCTTCCTGGCCCATTGGAAAATCGCCATGTG-TCCTCTGG-CCAGTCCCAGCACCCCCAGGTGGGACCCTAGCAACCCTGCA----CCTCCCACTGCAGCCC-----TGTCTCCCTCCTCTTCGCAGGGCAGCTGCCAAGCCTCGCCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------CAGCTGTTTCCCCCACGCCCCAAGTGTCCTCAGAGAACCCCTTCCAGACCCCAAAGTCCAGAGCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 154429 354 - 21531802 GGGCAGGAGGTACTGCGGCTTCTTCTCCTGCCAC--AGCCCCAGGGACCCGACAG--GGACACTCGGAGACTCCGCCTCTG----CCT----CTGTGC---GGGGTCATGCT------CTGCCTG--------------CCTTCCTGGCCCATTGGGAAATCGCCGTGTG-TCCTCTGG-CCACTCCCAGCACCCCCAGGTGGGACCCCAGCAACCCCGCA----CCTCCCACTGCGGCCC-----TGTCTCCCTCCTTCTCGCAGGGCAGCTGCCAAGCCTCGCCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGGGG-----------------CAGCTGTTTCCCCCACTCCCCAGGTGTCCTCAGAGAACCCCTTCCAGACCCCAAAGTCCAGAGCTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 191840 360 - 2515279 GGGCAGGAGGTACTGCGGCTTCTTCCCCTGCCAC--AGCCTCAGGGACCCGACGG--GGAC--------ACTCTGCCTCTG----CCT----CTGTGC---GGAGTCATGCT------CTGCCTGGAAAGCTCCTCCTTCCTTCCTGGCCCATTGGAAAATCGCCATGTG-TCCTCTGG-CCAGTCCCAGCACCCCCAGGTGGGACCCTAGCAACCCTGCA----CCTCCCACTGCAGCCC-----TGTCTCCCTCCTCCTCGCAGGGCAGCTGCCAAGCCTCGCCCAGTCCAGGTCTC-----CCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------CAGCTGTTTCCCCCATGCCCCAAGTGTCCTCAGAGAACCCCTTCCAGACCCCAAAGTCCAGAGCTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 347127 369 + 6586416 GGGCAGGAGGTACTGCGGCTTCTCCCCCTGCCAC--AGCCCCAGGGACCCTACAG--GGACACTTGGAGACTCTGCCTCTG----CCT---CCTGTTG---GGGGTCATGCT------CTGCCTGGAAAGTTCCTCCTTCCTTCCTGGCCCATTGGGAAATCACCGTGTG-TCCTCCGG-CCAGCCCCCGCACCCCCGGGTGGGACCCCAGCAACCCCGCA----TCTCCCACTGCAGCCC-----TGTCTCCCTCCTCCTCACAGGGCAGCTGCCAAGCCTCGTCCAGTCCAGGTCTC-----TCCAGGCAGGATCCCTTGGG-GGAAACCTGAGGAGG-----------------CAGCTGTTTACCCCACTCCCCGCGTGTCCTCAGAGAACCCCTTCCAGACCCCAAAGTCCAGAGCTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 81627 369 + 138751 GGGCAGGAGGTACTGTGGCTTCTTCCCCTGCCAC--AGTTCCAGGGACCTGACAG--GAACACTCAGCGACTCTGCCTCTG----CCT---CTTGTGT---GGGGTCATGCT------CTGCCTGGAAAGCTCCTCCTCCCTCCCTGGCCCATTGGGAAACCCCAGTATG-TCTTCTGG-CCAGTCCCAGCACCCCAGGGTGGGACCCCAGTGACCCTGCA---CCCCCGAGCTGCAGCCC-----TGTCTCCCTCCTCCTGGCAGGGCAGCTGCCCACCCTTGCCCAGCCCAGGCCTC-----TCAAGGCAGGTCTCCTTGGG--GAAACCTGAGGAGG-----------------CGGCTGCTACCCTCACTCTCCACGTGTCCTCAGAGAGTCCCTTCCAGACCCCAAGGTCCAGAGCTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 394609 372 - 2409723 GGGCAGGAGGTAGTGTGGCTTCTTCCCCTGCCAC--AGTCCCAGGGACCTGACAG--GAACACTCAGCGACTCTGCCTCTG----CCT---CCTGTGT---GGGGTCCTGCT------CTGCCTGGAAAGCTCCTCCTCCCTCCCTGGCCTATTGGGAAATCCCAGTATG-TCTTCTGG-CCAGTCCCAGCACCCCAAGGTGGGACCCCAGTGACCCTGTACCCCCCCCCAACTGCAGCCC-----TGTCTCCCTCCTCGTGGCAGGGCAGCTGCCCAGCCTCGCCCAGCCCAGGCCTC-----CCCAGGCAGGTCTCCCTGGG--GAAACCTGAGGAGG-----------------CAGCTGCTACCCCCACTCTGCACGTGTCCTCAGAGAGCCCCTTCCAGACCCCAAGGTCCAGAGCTC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 555770 360 - 2125214 GGGCAGGAGGTACTGTGGCTTCTTCCCCTGCCAC---GTCCCAGGGACCTGACAG--GAACACTCAGCGACTTTGCCTCTG----CCT---CCTGTGT---GGGGTCATGCT------CTGCCTGGAAAGCTCCTCCTCCCTCCCTGGCCCATTGGGAAATCCCAGTATG-TCTTCTGG-CCAGTCCCAGCACCCCCGGGGTGG--------GACCCTGCA---CCCCCCAACTGCAGCCC-----CATCTCCCTCCTCCTGGTGGGGCAGCTgcccagcctcgcccagcccaggcctc-----cccagGCAGGTCTCCTTGGG--GAAACCTGAGGAGA-----------------CAGCTGCTATCCCCACTCTCCACGTGTCCTCAGAGAGCCCGTTCCAGACCCCAAGGTCCAGAGCTC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 149436 367 + 376347 GGGCAGGAGGTACTGTGGCTTCTTCCCCTGCCAC--AGTCCCAGGGGCGTGACGG--GAACACTCAGCGACTCTGCCTCTG----CCT---CCTGTGT---GGGGTCATGCT------CTGCCTGGAAAGCTCCTCCTCCCTCCCTGGCCCATTGGGAAGTCCCAGTATG-TCTTCTGG-CCAGTCCCAGCACCCCGGGGTGGGACCCCAGTGACGCTGCA---TCCCCCAACTGCAGCCC-----CGTCTCCCTCCTCCTGGCAGGGCAGCTgcccagcctcgcccagcccaggcctc-----cc-agGCAGGTCTCCCTGGC--GAATCCTGAGGAGG-----------------CAGCTGCCACCCCC-CTCTCCACGTGTCCTCAGAGAGCCCCTTCCAGACCCCAAGGTCCAGAGCTC i aotNan1.NW_018514293v1 I 55 I 41 s otoGar3.GL873611 2283090 315 - 8137123 TGGTAGCAAGTG----GGCATCTTTACTAGCCAT-GAGTCCCAGGGACCCACAGGGTGGACCCTCAGAGACCCCACCTCTG----CTT---CCAATGC-----------------------------AAGTTCCTCCTCCTTTCCTGCTTCACTGGGGAGTCTGAATTTGACCTTCTGGCCCACTGCCTGCACATGCTGG----------GCACCCCAGTC---CCTCCTGGCTGC-------------------------TGCATGGAGGCTGCTATGCCTTGACAAGCCTGGAGCTTGGGTGTCCAGGCAAATTTCTTTGGC--ATGAGCTGAGGATGAGATGATTTGATGGAGCCAGTTGTTCCCTCT------TAAATATCATTAGA-------------ACCCCAAA----AGA---- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61072531 313 - 77573801 GCACATTAGAGCAAGCGGCATCTCCTCGTGTTGCCTGTCCCCAGGGATCCAGCCA--CAAAACCCAAAGACCCAGAGTCCACAGTCCTGGGCCTGTGCCCAGGCCACGTGCTCCCTCGCTGCCTGGAAAACACCTCCCTCCACC--AGCCACCTGGGAA--CTCCATCTG-TCCTCTGG-CCCA----------------------------GACCCTGTC-ATCCCCACTGCTGCAGCCCATCGTTTTCTCCTTGCCCCTGGGAGG-----------------------------CCT-----CCTGGGCAGATGTCATTGGATGGCACCCTGGGGA-------------------CTG----TACTCTCACT---GAGGCATCCTCAGAAA------CCCAGAGCCCAAGAGTC------- i canFam3.chr6 C 0 C 0 a score=321646.000000 s hg38.chr7_KI270899v1_alt 180214 41 + 190869 GGCCTCAGGTTCCCTTGCTCGGGTCTGGGAACTGGAAGTCG s panTro5.chr7_NW_015973580v1_random 55555 41 - 83720 GGCCTCAGGTTCCCTTGCTCGGGTCTGGGAACTGGAAGTCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570125 41 + 162613886 GGCCTCAGGTTCCCTTGCTCGGGTCTGGGAACTGGAAGTCG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 141549 41 - 432965 AGCCTCAGGTTCCCTTGCTCGGGTCTGGGAACTGGAAGTCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204202 41 + 85365473 AGCCTCAGGTTCCCTCACTCGGGTCTGGGAACTGGAAGTCG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34050612 41 + 185818997 AGCCTCAGGTTCCCTCACTCGGGTCTGGGAACTGGAAGCCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33668511 41 + 192294377 AGCCTCAGGTTCCCTCACTCGGGTCTGGGAACTGGAAGCCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435067 41 - 9440265 AGCCTCAGGTTCCCTCACTCGGGTCTGGGAACTGGAAGCCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025099 41 - 21915920 AGCCTCAGGTTCCCTCACTCGGGTCTGGGAACTGGAAGCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 154783 41 - 21531802 AGCCTCAGGTTCCCTCCCTCGGGTCTGGGAACTGGAAGCCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 192200 41 - 2515279 AGCCTCAGGTTCCCTCACTCGGGTCTGGGAACTGGAAGCCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 347496 41 + 6586416 AGCCTCAGGTTCCCTCCCTTGGGTCTGGGAACTGGAGGTCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 81996 40 + 138751 AGGAGCAGGTTCCCTCACTCGGGGATGGGGATGGAAAGTC- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 394981 40 - 2409723 AGGAGCAGGTTTCCTCACTCGGGGATGGGAACGGAAAGTC- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556130 40 - 2125214 AGGAACAGGTTCCTTCACTCGGGGATGGGAACAGAAAGTC- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2283405 24 - 8137123 -----------------CTCAGGTCCAAGAACTAGAGGTCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61072844 32 - 77573801 -----CAGGCCCTCTAGCT--GGTCTA--AATGGGAGGttg i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 149803 41 + 376347 I a score=547305.000000 s hg38.chr7_KI270899v1_alt 180255 55 + 190869 GTCCCGCTCCCCTCCCTGGCCTCTGCCCCATTTTTCTGTCCGCTTCCACGTAGag s panTro5.chr7_NW_015973580v1_random 55596 55 - 83720 GTCCCGCTCCCCTCCCCGGCCTCTGCCCCATTTTTCTGTCCGCTTCCACGTAGag i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570166 55 + 162613886 GTCCCGCTCCCCTCCCCGGCCTCTGCCCCATTTTTCTGTCCGCTTCCACGTAGag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 141590 55 - 432965 GTCCCGCTCCCCTCCCCGGCCTCTGCCCCATTTTTCTGTCCGCTTCCACGTAGag i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204243 55 + 85365473 GTCCCGCTCCCCGCCCCGGCCTCTGCCCCATTTTTCTGTCCGATTCCATGAAGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34050653 55 + 185818997 GTCCTGCTCCCCTCCCCAGCCTCTGCCCCATTTTTTTGTTCGCTTCCAtgtagag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33668552 55 + 192294377 GTCCTGCTCCCCTCCCCAGCCTCTGCCCCATTTTTTTGTTCGCTTCCAtgtagag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435108 55 - 9440265 GTCCTGCTCCCCTCCCCAGCCTCTGCCCCATTTTTTTGTTCGCTTCCAtgtagag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025140 55 - 21915920 GTCCTGCTCCCCTCCCCAGCCTCTGCCCCATTTTTCTGTTCGCTTCCAtgtagag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 154824 55 - 21531802 GTCCTACTCCCCTCCCCAGCCTCTGCCCCATTTTTCCGTTCGCTTCCACATAGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 192241 55 - 2515279 GTCCTGCTCCCCTCCCCAGCCTCTGCCCCATTTTTCTGTTTGCTTCCAtgtagag i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 347537 55 + 6586416 GTCCTGCTCCCCTCCCCAGCCTCTGCCCCATTTTTCTGTTCGCTTCCACATAGag i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82036 53 + 138751 ATCCTGT-CCCCTCCCTGGCCTCTGCCCCATTTTTC-ATTCGATTCTACATAGag i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395021 53 - 2409723 GTCCTGC-TCCCCTCCCGGCCTCTGCCCCATTTTCC-ATTCGATTCTACGTAGag i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556170 54 - 2125214 GTCCTGCTCCCCTCCCCGGCCTCTGCCCCATTTTTC-ATTCGATTCTACGTAGag i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 149844 54 + 376347 GTCCTGCTCCCCTCCCCGGCCTCTGCCCCATTTTTC-ATTCGATTCTACGTAGag i aotNan1.NW_018514293v1 I 41 C 0 s otoGar3.GL873611 2283429 42 - 8137123 ------------GCTCCAATCTCAGCTCCATTTCTTTG-CAGCTTTCACATGGAG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61072876 54 - 77573801 gtcctgc-cttgcccccagccatcgtcccatttctacactccctcccgcacaaag i canFam3.chr6 C 0 I 475 a score=3754278.000000 s hg38.chr7_KI270899v1_alt 180310 417 + 190869 ca-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcaaccacaggagaaattctgaaaacaagagtggaagctgctgttctatgagagaaagtcacatccgtacaggcatctgcgctcac-cagggtgcc-ccctctctgggccagaaggccgcct-gt----aagtcaccggagacgctcatccatggagaaggcctgacccc---agtttggggtaatttcttgggcccctccccacacactctttctctttgtttccgtcgaacatggtctttaaggctgagctccaagccacgcctttgcgacatagcc--tgtccc--gagtccgtcccttgcagacca--aggtatacatgctattaagcttc----tgtttttctcttgtt-atctgt----------------------------------------------------------ct s panTro5.chr7_NW_015973580v1_random 55651 419 - 83720 ca-----------------------------------------------------------------------gcccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcaaccacaggagaaattctgaaaacaagagtggaagctgctgttctgtgagagaaagtcacatccgtacaggcatctgcgctcac-cagggtgcc-ccctctctgggccagaaggccggct-gt----aagtcaccggagacgctcatccacggagaaggcctgacccc---agtttggggtaatttcttgggcccctccccacacactctttctctttgtttccgtcgaacgtggtctttaaggctgagctccaagccacatctttgagacatagcc--tgtcccctgagtccatcccttgcagacca--aggtatacatgctattaagcttc----tgtttttctcttgtt-atctgt----------------------------------------------------------ct i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570221 419 + 162613886 ca-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcaaccacaggagaaattctgaaaacaagagtggaagctgctgttctgtgagagaaagtcacatccgtacaggcatctgcgctcac-cagggtgcc-ccctctctgggccagaaggccggct-gt----aagtcaccggagacgctcatccacggagaaggcctgacccc---agtttggggtaatttcttgggcccctccccacacactctttctctttgtttccgtcgaacgtggtctttaaggctgagctccaagccacgtctttgagacatagcc--tgtcccctgagtccgtcccttgcagacca--aggtatacatgctattaagcttc----tgtttttctcttgtt-atctgt----------------------------------------------------------ct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 141645 417 - 432965 ca-----------------------------------------------------------------------gaccagaatatgccaccccaaaat-tgcctctttggcataagcattattttgagctgcttattttgagaaactgcaaccacaggagaaattctgaaaacaagagtggaagctgctgttctgtgagagaaagtcacatccgtacaggcatctgcgctcac-cagggtgcc-ccctctctgggccagaaggccgcct-gt----aagtcaccggagacgctcatccacggagaaggcctgacccc---agtttggggtaatttcttgggccgttccccacacactctttctc-ttgtttccgtcgaacgtggtctttaaggctgagctccaagccacgtctttgagacatagcc--tgtcccctgagtccgtcctgtgcagacca--aggtatacatgctattaagcttc----tgtttttctcttgtt-atctgt----------------------------------------------------------ct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204298 480 + 85365473 CC-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcaaccacaggagaaattctgaaagcaagaatggaagctgctcttctgtaagagaaagtcacatccgtacaggaatctgcactcac-cagggtgcctccctctctgggccagaaggccagct-gt----aagtcaccagagacgctcatccacggagaaggcctgacccc---agtttggggtaatttcttgggcccctccccacacaccctttctctttgtttccgtcaaacatggtcttcaaggctgagctccaagccacgtctttgacatatagtc--tgtcccctgagtccgtcc-gtgcagacca--aggtatacatgctattaagcttctgtttgtttttctcttgtt-atctgtctttcgttatg-gggtctgtctcaactttaaggtctatgaagggtgcagagagaacgact i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34050708 461 + 185818997 ca-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcagccacaggagaaactctgcaagcaagcatggaagctgctcttctgtgagagaaagtcacatccgtacagga----------------ggtgcctccctccctgagccagaaggccggct-g-----aagtcaccagagatgctcatccacggagaaggcctgacccc---agtttgGGGTAATTTCTTGGGCccctccc--cacaccctttctc--tgtttccgttgaacatggtatttaagcctgagctccaagccacgtctctgagacatagtc--tgtcccctgagtacgtcccgtgcagacca--aggtgtacatgcta-taagcttctgtttgtttttctcctctt-atctgtcttgcgttacaggggtctgtcccaacttcaaggcctgtgaaggctgcagagagaattgct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33668607 462 + 192294377 ca-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcagccacaggagaaactctgcaagcaagcatggaagctgctcttctgtgagagaaagtcacatccgtacagga----------------ggtgcctccctccctgagccagaaggccggct-g-----aagtcaccagagatgctcatccacggagaaggcctgacccc---agtttggggtaatttcttgggcccctccc--cacaccctttctc--tgtttccgttgaacatggtatttaagcctgagctccaagccacgtctctgagacatagtc--tgtcccctgagtacgtcccgtgcagacca--aggtgtacatgctattaagcttctgtttgtttttctcctctt-atctgtcttgcgttacaggggtctgtcccaacttcaaggcctgtgaaggctgcagagagaattgct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435163 462 - 9440265 ca-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcagccacaggagaaactctgcaagcaagcatggaagctgctcttctgtgagagaaagtcacatccgtacagga----------------ggtgcctccctccctgagccacaaggccggct-g-----aagtcaccagagatgctcatccacggagaaggcctgacccc---agtttgGGGTAATTTCTTGGGCccctccc--cacaccctttctc--tgtttccgttgaacatggtatttaagcctgagctccaagccacgtctctgagacatagtc--tgtcccctgagtacgtcccgtgcagacca--aggtgtacatgctattaagcttctgtttgtttttctcctctt-atctgtcttgcgttacaggggtctgtcccaacttcaaggcctgtgaaggctgcagagagaattgct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025195 462 - 21915920 ca-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcagccacagaagaaactctgcaagcaagcatggaagctgctcttctgtgagagaaagtcacatccgtacagga----------------ggtgcctccctccctgagccagaaggccggct-g-----aagtcaccagagatgctcatccatggagaaggcctgacccc---agtttgGGGTAATTTCTTGGGCccctccc--cacaccctttctc--tgtttccgttgaacatggtatttaagcctgagctccaagccacgtctctgagacatagtc--tgtcccctgagtacgtcccgtgcagacca--aggtgtacgtgctattaagcttctgtttgtttttctcctctt-atctgtcttgcgttacaggggtctgtcccaacttcaaggcctgtgaaggctgcagagagaattgct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 154879 443 - 21531802 CG-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactg------------------tgcaagcaagcgtggaagctgctcttctgt--gagaaagtcacattcgtacagga----------------ggtgcctccctccctgagctggaaggccggct-g-----aagtcaccagagatgcccatccacggagaaggcctgacccc---agtttggggtgatttcttgggcccctccc--tacaccctttctctttgtttccgttgaacgtggtatttaagcctgagctccaaggcacatctctgagacatagtc--tgtcccctgagtacgtcccgtgcagacca--aggtgcacatgctattaagcttctgtttgtttttctcctctt-atctgtcttgcgttaca-gggtctgtcccaacttcaaggcctgtgaaggctgcagagagaattgct i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 192296 462 - 2515279 ca-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcagccacaggagaaactctgcaagcaagcatggaagctgctcttctgtgagagaaagtcacatccgtacagga----------------ggtgcctccctccctgagccagaaggccggct-g-----aagtcaccagagatgctcatccacggagaaggcctgacccc---agtttgGGGTAATTTCTCGGGCccctccc--cacaccctttctc--tgtttccgttgaacatggtatttaagcctgagctccaagccacgtctctgagacatagtc--tgtcccctgagtacgtcccgtgcagacca--aggtgtacgtgctattaagcttctgtttgtttttctcctctt-atctgtcttgcgttacaggggtctgtcccaacttcaaggcctgtgaaggctgcagagagaattgct i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 347592 478 + 6586416 ca-----------------------------------------------------------------------gaccagaatatgccaccccaaaatatgcctctttggcataagcattattttgagctgcttattttgagaaactgcagccacaggagaaactctgcaagcaagagtggaagctgctcttctgtgagagaaagtcacacccgtacaggaatctgcactcac-cagggtgcctccctccctgagccagaaggccagctgg-----aagtcaccagagacgcccatcca-agagaaggcctgacccc---agtttgggataatttcttgggcccctccc--cacaccctttctctttgtttccattgaacgtggtatttaagcctgagctccaagccacatctctgagacacagtc--tgtcccctgagtacgtcccgtgcagacca--aggtatacatgctgttaagcttctgtttgtttttctcctctt-atctgtcttgcgttaca-gggtctgtgtcaactgcaaggcctatgaagggtgcagagagaattgct i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82089 423 + 138751 ca-----------------------------------------------------------------------gaccggaatatgcca-cccaaaatatgcctctctggcataagcattattttgagctgcttattttgagaaactgcagctacaggaaaaactctgaaaacaagagtggaagctgctcctccctaagagaaagtcacatctgtataggaatctgtactcac-caggatgcctccctctctaggccagaaggccggct-a-----tgctcaccagagatgctcatccatagagaagggctggccgctgttgtttggggtaatttcctgggcccctccc--cacacccattttctttgtttctgcagaacatggtatttaagcctgagctccaagccacgtctttgagacgtactc--tgtcccttgagtatctcctgcgcagacca--aggtatacaagctattaagcttctgtttgtttttctcttgtt-atctgtct---------------------------------------------------------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395074 397 - 2409723 ca-----------------------------------------------------------------------gaccggaatatgcca-cccaaaatatgcctctctggcataagcattattttgagctgcttattttgagaaactgcagctacaggaaaaactctgaaaacaagagtggaagctgctcctccctaagagaaagtcacagccgtgcaggaatctgtactcac-caggatgcctccct------------------------------ctcGCTGGAGATGCTCATGCATGGAGAGGGCCTGACCGCTGTTGTTTGGGGTCATTTactgggcccctccc--cacacccattttctttgtttctgcggaacatggtatttaagcctgagctccaagccatgtctttgagatgtaccc--tgtcccctgagtatctctcgcgc-gacc---aggtatacatgctattaagcttctgtttgtttttctcttgtt-atctgtct---------------------------------------------------------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556224 422 - 2125214 ca-----------------------------------------------------------------------gaccagaata-gcca-cccaaaatatgcctctctggcataagcattattttgagctgcttattttgagaaactgcagctacaggaaaaactctgaaaacaagagtggaagctgctccttcctaagagaaagtcacatccatacaggaatctgtactcac-caggatgcctccatctctgggccagaaggccagct-a-----ttctcaccagagatgctcatccatggagaaggcctgacagctgttgtttggggtaatttcctgtgcccctccc--cacacctgttttctttgtttgtgtggaacatggtatttaagcctgagctccaagccacgtctttgagacgtactc--tgtcccctgagcatctccctcgcagacca--aggtatacatgctattaagcttctgtttgttttgctcttgtt-atctgtct---------------------------------------------------------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 149898 416 + 376347 ca-----------------------------------------------------------------------gaccggaatatgcca-cccaaaatatgc--ctctggcataagcattattttgagctgcttattttgagaaactgcagctacaggaaaaactctgaaaacaggagtgggagctgctcctcgctaagagaaagtcacatctgtacaggaatc--taccccc-cgggatgcctccctctctgggccagaaggccggct-g-----tgctcaccagaggtgctcatccgtggggaaggcctgagcgctgctgtctggggtactttcctggg-ccctccc--cgcacccgttttctttgct--tgcggaacatggtatttacgcctgagctccaagccacgtctttgagacgtgctc--tgtcccctgagtatctcccgcgcagacca--aggtagacatgctattaggcttctgtttgtttttctcttgtt-atctgtct---------------------------------------------------------- i aotNan1.NW_018514293v1 C 0 I 67 s otoGar3.GL873611 2283471 494 - 8137123 GAGACACAATAGGCCACCCCAAAATATGACTATGAgagaccagaatatgacacctacaaatctgactataggtgaccagaatatgtcacccccaaatatgtatctttggcataagaattattttgagctgctta-tttgagaagctgcagacataggagaaactctgaaaacaagggtggaagttaccctt-tgtgggagaaatccacatctcta-aggaaactctaccctcatggagtatctcccactccatcccagaaaagaggct-gtccccagatcaccagagtctctccccagcggagaaggcaccaactt---actcatggg-gatttcctgggcacttccc--aaca-tatctttctttgttttatttgaatgtggtatttaagcttaaactcagagccatgtctttgagatatactcattttcccatgag----tcccacgtattacatgaggcacacaggttattaaacttctatttctttttctcttgttaatctgtct---------------------------------------------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I a score=21840.000000 s hg38.chr7_KI270899v1_alt 180727 2 + 190869 tt s panTro5.chr7_NW_015973580v1_random 56070 2 - 83720 tt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570640 2 + 162613886 tt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142062 2 - 432965 tt i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204778 2 + 85365473 tt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051169 2 + 185818997 tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669069 2 + 192294377 tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435625 2 - 9440265 tt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025657 2 - 21915920 tt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155322 2 - 21531802 tt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 192758 2 - 2515279 tt i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348070 2 + 6586416 tt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82512 2 + 138751 tt i calJac3.chrUn_GL286444 C 0 I 56 s saiBol1.JH378296 395471 2 - 2409723 tt i saiBol1.JH378296 C 0 I 56 s cebCap1.NW_016107703v1 556646 2 - 2125214 tt i cebCap1.NW_016107703v1 C 0 I 67 s otoGar3.GL873611 2283965 2 - 8137123 tt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150314 67 + 376347 I a score=69682.000000 s hg38.chr7_KI270899v1_alt 180729 11 + 190869 tCCACCTTGCA s panTro5.chr7_NW_015973580v1_random 56072 11 - 83720 tCCACCTTGCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570642 11 + 162613886 tCCACCTTGCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142064 11 - 432965 tCCACCTTGCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204780 11 + 85365473 tCCACCTTGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051171 11 + 185818997 tccACCTTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669071 11 + 192294377 tccACCTTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435627 11 - 9440265 tccACCTTGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025659 11 - 21915920 tccACCTTGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155324 11 - 21531802 tccACCTTGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 192760 11 - 2515279 tccACCTTGCA i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348072 11 + 6586416 tctACCTTGCA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82570 11 + 138751 tccaccctctG i calJac3.chrUn_GL286444 I 56 C 0 s saiBol1.JH378296 395529 11 - 2409723 tccactctcTG i saiBol1.JH378296 I 56 C 0 s otoGar3.GL873611 2283967 1 - 8137123 -------t--- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150314 67 + 376347 I e cebCap1.NW_016107703v1 556648 67 - 2125214 I a score=562297.000000 s hg38.chr7_KI270899v1_alt 180740 65 + 190869 GCACGAAGCTT-CCCCCAGGAATCCTCCACGCCCTCACCTGCACCA----AGACTTTCAATTAAGAGCAG s panTro5.chr7_NW_015973580v1_random 56083 62 - 83720 GCAGGAAGCTT-CCCCCAGGAATCC---ACGCCCTCACCTGCACCA----AGACTTTCAATTAAGAGCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570653 62 + 162613886 GCAGGAAGCTT-CCCCCAGGAATCC---ACGCCCTCACCTGCACCA----AGACTTTCAATTAAGAGCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142075 65 - 432965 GCACGAAGCTT-CCCCCAGGAATCCTCCACGCCCTCACCTGCACCA----AGACTTTCAATTAAGAGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204791 65 + 85365473 GCATGAAGCTT-CCCCCAGGAATCCTCCACGCCCCCAGCTGCACCA----AGACTTTCAATTAAGAGCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051182 65 + 185818997 GCACGAAGCCT-CCCCCCAGGATCCTCCACGCCCCCAGCTGCTCCA----AGACTTTCAATTATGAGCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669082 65 + 192294377 GCACGAAGCCT-CCCCCCAGGATCCTCCACGCCCCCAGCTGCTCCA----AGACTTTCAATTATGAGCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435638 65 - 9440265 GCACGAAGCCT-CCCCCCAGAATCCTCCACGCCCCTAGCTGCTCCA----AGACTTTCAATTATGAGCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025670 66 - 21915920 GCACGAAGCCTCCCCCCCGGGATCCTCCACGCCCCCAGCTGCTCCA----AGACTTTCAATTACGAGCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155335 65 - 21531802 GCACGAAGCCT-CCCCCCGGGATCCTCCACGCCCCCAGCTGCACCA----AGACTTTCAATTGCGAGCAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 192771 65 - 2515279 GCACGAAGGCT-CCCCCCGGGATCCTCCACACCCCCAGCTGCTCCA----AGACTTTCAATTACGAGCAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348083 65 + 6586416 GCACGAAGCCT-CCCCCAGGGATCCTCCACGCCCCCAGCTGCACCA----AGACTTTCAATTACGAGCAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82581 65 + 138751 GCACAAAGCTT-ACCCCAGGAATCCTCCATGCCTCCAGCTGCACCA----AGACTTTCAATTAAGAGCAC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395540 65 - 2409723 GCACAGAGCTT-CCCCCAGGAATCCTCCAGGCCTCCAGCTGCACCA----AAACTTTCAATTAAGAGCAC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556715 65 - 2125214 GCACAAAGCTT-CCCCCAGGAATCCTCCCTGCCTCCAGCTGCACCA----AGACTTTCAATTAAGAGCAC i cebCap1.NW_016107703v1 I 67 C 0 s aotNan1.NW_018514293v1 150381 65 + 376347 GCACAAAGCTT-CCCCCAGGAACCCTCCATGCCTCCGGCTGCACCA----AGACTTTCAATTAAGAGCAC i aotNan1.NW_018514293v1 I 67 C 0 s otoGar3.GL873611 2283968 34 - 8137123 ---------------------------------gtcacatggtccagctcagactt---atcaagagaag i otoGar3.GL873611 C 0 I 30 e canFam3.chr6 61072930 475 - 77573801 I a score=173008.000000 s hg38.chr7_KI270899v1_alt 180805 19 + 190869 CAGTGCCCTCCTGGTGTCT s panTro5.chr7_NW_015973580v1_random 56145 19 - 83720 CAGTGCCCTCCTGGTGTCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570715 19 + 162613886 CAGTGCCCTCCTGGTGTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142140 19 - 432965 CAGTGCCCTCCTGGTGTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204856 19 + 85365473 CAGTGCCCTCCTGGTGTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051247 19 + 185818997 CTGTGCCCTCCTGGAGTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669147 19 + 192294377 CTGTGCCCTCCTGGAGTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435703 19 - 9440265 CTGTGCCCTCCTGGAGTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025736 19 - 21915920 CTGTGCCCTCCTGGAGTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155400 19 - 21531802 CGGTGCTCTCCTGGAGTCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 192836 19 - 2515279 CTGTGCCCTCCTGGAGTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348148 19 + 6586416 CAGTGCTCTCCTGGAGTCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82646 19 + 138751 TAGTGCCCTCCTGGCATCT i calJac3.chrUn_GL286444 C 0 I 5 s saiBol1.JH378296 395605 19 - 2409723 TAGTGCCCTCCTGGCATCT i saiBol1.JH378296 C 0 I 5 s cebCap1.NW_016107703v1 556780 19 - 2125214 TAGAACCCTCCTGGCGTCT i cebCap1.NW_016107703v1 C 0 I 3 s aotNan1.NW_018514293v1 150446 19 + 376347 TAGTGCCCTCCTGGCGTCT i aotNan1.NW_018514293v1 C 0 I 53 e otoGar3.GL873611 2284002 30 - 8137123 I e canFam3.chr6 61072930 475 - 77573801 I a score=171810.000000 s hg38.chr7_KI270899v1_alt 180824 26 + 190869 GGTGGTGCCAG-GGGGCAGGCCTGGTC s panTro5.chr7_NW_015973580v1_random 56164 26 - 83720 GGTGGTGCCAG-GGGGCAGGCCTGGTC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570734 26 + 162613886 GGTGGTGCCAG-GGGGCAGGCCTGGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142159 25 - 432965 GGTGGTGCCA--GGGGCAGGCCTGGTC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204875 26 + 85365473 GGTGGTGCCGG-GGGGCAGGCCTGGTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051266 27 + 185818997 GGTGGTGCGGGAGGGGCGGGCCTGGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669166 27 + 192294377 GGTGGTGCGGGAGGGGCGGGCCTGGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435722 27 - 9440265 GGTGGTGCGGGAGGGGCGGGCCTGGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025755 27 - 21915920 GGTGGTGCGGGAGGGGCGGGCCTGCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155419 27 - 21531802 GGTGGTGCGGGAGGGGTGGGCCTGGTC i chlSab2.chr28 C 0 I 212 s manLeu1.NW_012101810v1 192855 27 - 2515279 GGTGGTGCGGGAGGGGCGGGCCTGGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348167 27 + 6586416 GGTGGTGCGGGAGGGGCGGGCCTGGTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82670 25 + 138751 GGTGGTGTGG--GGGGGTGGCCTGGTC i calJac3.chrUn_GL286444 I 5 C 0 s saiBol1.JH378296 395629 25 - 2409723 GGTGGTGGAG--GGGTGTggcctggtc i saiBol1.JH378296 I 5 C 0 s cebCap1.NW_016107703v1 556802 21 - 2125214 GGTGG----G--GGGGATGGCCTGGTC i cebCap1.NW_016107703v1 I 3 C 0 e otoGar3.GL873611 2284002 30 - 8137123 I e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I a score=42276.000000 s hg38.chr7_KI270899v1_alt 180850 5 + 190869 CTCAG s panTro5.chr7_NW_015973580v1_random 56190 5 - 83720 CTCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570760 5 + 162613886 CTCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142184 5 - 432965 CTCAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204901 5 + 85365473 CTCGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051293 5 + 185818997 CTCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669193 5 + 192294377 CTCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435749 5 - 9440265 CTCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025782 5 - 21915920 CTCAG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 192882 5 - 2515279 CTCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348194 5 + 6586416 CTCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82695 5 + 138751 CTCAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395654 5 - 2409723 ctcag i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556823 5 - 2125214 CTCAG i cebCap1.NW_016107703v1 C 0 C 0 e otoGar3.GL873611 2284002 30 - 8137123 I e canFam3.chr6 61072930 475 - 77573801 I e chlSab2.chr28 155446 212 - 21531802 I e aotNan1.NW_018514293v1 150465 53 + 376347 I a score=67182.000000 s hg38.chr7_KI270899v1_alt 180855 11 + 190869 GCCTGGGGTCT s panTro5.chr7_NW_015973580v1_random 56195 11 - 83720 GCCTGGGGTCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570765 11 + 162613886 GCCTGGGGTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142189 11 - 432965 GCCTGGGGTCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204906 11 + 85365473 CTCTGGGGTCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051298 11 + 185818997 CCCTCGGGTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669198 11 + 192294377 CCCTCGGGTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4435754 11 - 9440265 CCCTCGGGTCT i macNem1.NW_012019910v1 C 0 I 333 s cerAty1.NW_012002954v1 17025787 11 - 21915920 CCCTCGGGTCT i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 192887 11 - 2515279 CCCTCGGGTCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348199 11 + 6586416 CCCTCGGGTCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82700 11 + 138751 CCCTCTGGTCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395659 11 - 2409723 ccctctggtct i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556828 11 - 2125214 CCCTCTGGTTT i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2284032 11 - 8137123 acaCAAAGTCC i otoGar3.GL873611 I 30 C 0 e canFam3.chr6 61072930 475 - 77573801 I e chlSab2.chr28 155446 212 - 21531802 I e aotNan1.NW_018514293v1 150465 53 + 376347 I a score=40110.000000 s hg38.chr7_KI270899v1_alt 180866 4 + 190869 TCTG s panTro5.chr7_NW_015973580v1_random 56206 4 - 83720 TCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570776 4 + 162613886 TCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142200 4 - 432965 TCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204917 4 + 85365473 TCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051309 4 + 185818997 TCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669209 4 + 192294377 TCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436098 4 - 9440265 TCTG i macNem1.NW_012019910v1 I 333 C 0 s cerAty1.NW_012002954v1 17025798 4 - 21915920 TCTG i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 192898 4 - 2515279 TCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348210 4 + 6586416 TCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82711 4 + 138751 TCTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395670 4 - 2409723 tctg i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556839 4 - 2125214 TCTG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2284043 4 - 8137123 TCTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e chlSab2.chr28 155446 212 - 21531802 I e aotNan1.NW_018514293v1 150465 53 + 376347 I a score=-2125.000000 s hg38.chr7_KI270899v1_alt 180870 8 + 190869 T-CCCCCCT- s panTro5.chr7_NW_015973580v1_random 56210 8 - 83720 T-CCCCCCT- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570780 8 + 162613886 T-CCCCCCT- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142204 6 - 432965 T---CCCCT- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204921 1 + 85365473 T--------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051313 8 + 185818997 G-CCCTTCA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669213 8 + 192294377 G-CCCTTCA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436102 8 - 9440265 T-CCCCCCT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17025802 8 - 21915920 G-CCCTTCA- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 192902 8 - 2515279 G-CCCTTCA- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348214 9 + 6586416 GCCCCCTCA- i colAng1.NW_012117710v1 C 0 C 0 s cebCap1.NW_016107703v1 556843 8 - 2125214 -ACCCCCCT- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2284047 8 - 8137123 --CTTCCCTC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e chlSab2.chr28 155446 212 - 21531802 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e calJac3.chrUn_GL286444 82715 0 + 138751 C a score=-12009.000000 s hg38.chr7_KI270899v1_alt 180878 2 + 190869 T-A s panTro5.chr7_NW_015973580v1_random 56218 2 - 83720 T-A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570788 2 + 162613886 T-A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142210 2 - 432965 T-A i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34051321 1 + 185818997 T-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669221 1 + 192294377 T-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436110 2 - 9440265 CA- i macNem1.NW_012019910v1 C 0 I 197 s cerAty1.NW_012002954v1 17025810 1 - 21915920 T-- i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012101810v1 192910 1 - 2515279 T-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348223 1 + 6586416 T-- i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2284055 1 - 8137123 T-- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e chlSab2.chr28 155446 212 - 21531802 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C e nomLeu3.chr20 204922 0 + 85365473 C a score=309994.000000 s hg38.chr7_KI270899v1_alt 180880 66 + 190869 TCCTGGGGAGCCCATCTGTCC---CCCTCATTCCTGGGAAGCCCGTCTGCCCCCCTCATTCCTGGGGAG s panTro5.chr7_NW_015973580v1_random 56220 66 - 83720 TCCTGGGGAGCCCATCTGCTC---CCCTCATTCCTGGGAAGCCCGTCTGCCCCCCTCATTCCTGGGGAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570790 65 + 162613886 TCCTGGGGAGCCCATCTGCCC---CCCTCATTCCTGGGAAGCCCGTCTG-CCCCCTCATTCCTGGGGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142212 66 - 432965 TCCTGGGGAGCCCATCTGTCC---CCCTCATTCCTGGGAAGCCCATCTGCCCCCCTCATTCCTGGGGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204922 48 + 85365473 ------------------CCC---CCCTCATTCCTGGGGAGCCCGTCTGTCCCCCTCATTCCTGGGGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051322 65 + 185818997 TCCTGGGGAGCCTGTCTGTCC---CCCTCATTCCTGGGGAACCCATCTGT-CCCCTCATTCCTGGGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669222 65 + 192294377 TCCTGGGGAGCCTGTCTGTCC---CCCTCATTCCTGGGGAACCCATCTGT-CCCCTCATTCCTGGGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436309 65 - 9440265 TCCTGGGGACCCCATCTGTCT---CTCTCATTCCTGGGGAGCTCGTCTGA-CCCCTCATTCCTGGGGAC i macNem1.NW_012019910v1 I 197 C 0 s cerAty1.NW_012002954v1 17025811 65 - 21915920 TCCTGGGGAGCCCGTCTGTCC---CCCTCATTCCTGGGGAACCCGTCTGT-CCCCTCATTCCTGGGGAG i cerAty1.NW_012002954v1 C 0 I 504 s chlSab2.chr28 155658 66 - 21531802 TCCTGGGGAGCCCGTCTGTCC---CCCTTATTCCTGGGGAGCTCGTCTGTCCCCCTCATCCCTGGGGAG i chlSab2.chr28 I 212 I 27 s manLeu1.NW_012101810v1 192911 65 - 2515279 TCCTGGGGAGCCCGTCTGTCC---CCCTCATTCCTGGGGAACCCGTCTGT-CCCCTCATTCCTGGGGAG i manLeu1.NW_012101810v1 C 0 I 27 s colAng1.NW_012117710v1 348224 66 + 6586416 TCCTGGGGAGCCCGTCTGTCT---CTCTCATTCCTGGGAAGCCCATCTGTCTCTCTCATTCCTGGGGAG i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2284056 48 - 8137123 ------GGACCCCTTCAATACCTGCCCACACTACAGCAAGA----------CCTCACATCATAG----- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C a score=118435.000000 s hg38.chr7_KI270899v1_alt 180946 28 + 190869 CCCGTCTGCCCCCCTCA-----TTCCTGGGGAG s panTro5.chr7_NW_015973580v1_random 56286 28 - 83720 CCCGTCTGTCCCCCTCA-----TTCCTGGGGAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570855 27 + 162613886 CCCATCTG-CCCCCTCA-----TTCCTGGGGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142278 28 - 432965 CCCATCTGCCCCTCTCA-----TTCCTGGGGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204970 27 + 85365473 CCCATCTG-CCCCCTCA-----CTCCTGGGGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051387 27 + 185818997 CTCGTCTG-ACCTCTCA-----TCCCTGGGGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669287 27 + 192294377 CTCGTCTG-ACCTCTCA-----TCCCTGGGGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436374 28 - 9440265 CCCGTCTGTCCCCCTCA-----TTCCTGGGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026380 28 - 21915920 CCCGTCTGTCCCCCTCA-----TTCCTGGGGAG i cerAty1.NW_012002954v1 I 504 C 0 s chlSab2.chr28 155751 28 - 21531802 CCTGCCTGTCCCCCTCA-----TCCCTGGGGAC i chlSab2.chr28 I 27 C 0 s manLeu1.NW_012101810v1 193003 28 - 2515279 CCCGTCTGTCCCCCTCA-----TTTCTGGGGGC i manLeu1.NW_012101810v1 I 27 C 0 s colAng1.NW_012117710v1 348290 28 + 6586416 CCCATCTGTCTCTCTCA-----TTCCTGGGGAG i colAng1.NW_012117710v1 C 0 I 255 s otoGar3.GL873611 2284104 30 - 8137123 CACTACTGACCTCTACATGGCCTCACCGGG--- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C a score=105030.000000 s hg38.chr7_KI270899v1_alt 180974 23 + 190869 CCT----------------------------GT-----CTGCCCCCCCCATTCCTG s panTro5.chr7_NW_015973580v1_random 56314 23 - 83720 CCC----------------------------GT-----CTGCCCCCCTCATTCCTG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570882 22 + 162613886 CCT----------------------------GT-----CTG-CCCCCTCATTCCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142306 23 - 432965 CCT----------------------------GT-----CTGCCCCCCTCATTCCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204997 20 + 85365473 CCT----------------------------GT-----CTG---TCCTCATTCCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34051414 23 + 185818997 CCC----------------------------GT-----CTGTCCCCCTCATTTCTG i rheMac8.chr3 C 0 I 723 s macFas5.chr3 33669314 23 + 192294377 CCC----------------------------GT-----CTGTCCCCCTCATTTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436402 23 - 9440265 CTT----------------------------GT-----CTGTCCCCCTCATTCCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026408 23 - 21915920 CTT----------------------------GT-----CTGTCCCCCTCATTCCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155779 51 - 21531802 CCTGCCTGTCCCCCTCATCCCTGGGGACCCCGT-----CTGTCCCCCTCATTCCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193031 23 - 2515279 TCT----------------------------GT-----CTGTCCCCCTCATTCCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348573 23 + 6586416 CCC----------------------------AT-----CTGTCCCCCTCATTCCTG i colAng1.NW_012117710v1 I 255 C 0 s otoGar3.GL873611 2284134 28 - 8137123 CCT----------------------------GTGGTTAGTGTCCTCCCTTCCCCTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C a score=13498.000000 s hg38.chr7_KI270899v1_alt 180997 4 + 190869 GGGG-------- s panTro5.chr7_NW_015973580v1_random 56337 4 - 83720 GGGA-------- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570904 4 + 162613886 GGGG-------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142329 4 - 432965 GGGG-------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 205017 4 + 85365473 GGGG-------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34052160 4 + 185818997 GGGG-------- i rheMac8.chr3 I 723 I 1 s macFas5.chr3 33669337 4 + 192294377 GGGG-------- i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 4436425 4 - 9440265 GGGA-------- i macNem1.NW_012019910v1 C 0 I 144 s cerAty1.NW_012002954v1 17026431 4 - 21915920 GGGA-------- i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 155830 4 - 21531802 GGGA-------- i chlSab2.chr28 C 0 I 2 s manLeu1.NW_012101810v1 193054 4 - 2515279 GGAG-------- i manLeu1.NW_012101810v1 C 0 I 2 s colAng1.NW_012117710v1 348596 4 + 6586416 GGGA-------- i colAng1.NW_012117710v1 C 0 I 1 s otoGar3.GL873611 2284162 10 - 8137123 --GGCTTCTTGA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C a score=294.000000 s hg38.chr7_KI270899v1_alt 181001 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 56341 1 - 83720 G i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570908 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142333 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 205021 1 + 85365473 G i nomLeu3.chr20 C 0 T 80 s otoGar3.GL873611 2284172 1 - 8137123 G i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 348600 1 + 6586416 I e canFam3.chr6 61072930 475 - 77573801 I e chlSab2.chr28 155834 2 - 21531802 I e manLeu1.NW_012101810v1 193058 2 - 2515279 I e cerAty1.NW_012002954v1 17026435 1 - 21915920 I e macNem1.NW_012019910v1 4436429 144 - 9440265 I e macFas5.chr3 33669341 1 + 192294377 I e rheMac8.chr3 34052164 1 + 185818997 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C a score=61320.000000 s hg38.chr7_KI270899v1_alt 181002 26 + 190869 CC---------------------------CATC----TGT--CCC---------------------------CCCTC----ATTCCTGGG s panTro5.chr7_NW_015973580v1_random 56342 53 - 83720 CC---------------------------CACC----TGC--CCCACTCATTCCTGGGGGGCCCGTCTGCCCCCCTC----ATTCCTGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570909 25 + 162613886 CC---------------------------CGTC----TTT--CC----------------------------CCCTC----ATTACTGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142334 26 - 432965 CC---------------------------CGTC----TGT--CCC---------------------------CCCTC----ATTCCTGGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052165 27 + 185818997 CC---------------------------CATC----TGTCCCC----------------------------CCCTC----ATCCCTGGG i rheMac8.chr3 I 1 C 0 s macFas5.chr3 33669342 25 + 192294377 TC---------------------------CGTC----TGT--CC----------------------------CCCTC----ATTCCTGGG i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 4436573 27 - 9440265 CC---------------------------CATC----TGTCCCC----------------------------CCCTC----ATCCCTGGG i macNem1.NW_012019910v1 I 144 C 0 s cerAty1.NW_012002954v1 17026436 24 - 21915920 CC---------------------------CATC----TGT---C----------------------------CCCTC----ATTCCTGGG i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 155836 51 - 21531802 CCGTCTGTCCCCCTCATTCCTGGGGAGCTCGTC----TGT---C----------------------------CCCTC----ATTCCTGGG i chlSab2.chr28 I 2 C 0 s manLeu1.NW_012101810v1 193060 24 - 2515279 CC---------------------------CGTC----TGT---C----------------------------CCCTC----ATCCCTGAG i manLeu1.NW_012101810v1 I 2 C 0 s colAng1.NW_012117710v1 348601 25 + 6586416 CC---------------------------CATC----TGT--CC----------------------------CCCTC----ATTCCTGGG i colAng1.NW_012117710v1 I 1 C 0 s otoGar3.GL873611 2284173 30 - 8137123 ------------------------------GTCATAGGGT--CC----------------------------CCATCAAGTATTCCTGAG i otoGar3.GL873611 C 0 I 35 e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C e nomLeu3.chr20 205022 80 + 85365473 T a score=106008.000000 s hg38.chr7_KI270899v1_alt 181028 31 + 190869 -GA-----TCCCATCTGT-CCCCCTCATTCCTGGGGAG s panTro5.chr7_NW_015973580v1_random 56395 31 - 83720 -GA-----TCCCATCTGT-CCCCCTCATTCCTGGGGAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570934 30 + 162613886 -GA-----GCCCACCTGC-CCCACTCATTCCTGGGG-G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142360 31 - 432965 -GA-----TCCCATCTGT-CCCCCTCATTCCTGGGGAG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052192 32 + 185818997 -GA-----CCCCATCTGTCCCCCCTCATTCCTGGGGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669367 31 + 192294377 AGA-----CCCCGTCTGT--CCCCTCATCCCTGAGGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436600 32 - 9440265 -GA-----CCCCATCTGTCCCCCCTCATTCCTGGGGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026460 35 - 21915920 -GAGACCCTCCCATCTGT--CCCCTCATCCCTGGGGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155887 35 - 21531802 -GAGACCCTCCCATCTGT--CCCCTCATCCCTGAGGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193084 31 - 2515279 -GA-----CCCCATCTGT-CCCCCTCATTCCTGGGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348626 32 + 6586416 -GA-----CCCCATCTGTCCCCCCTTATTCCTGGGGAC i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2284203 35 - 8137123 I e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C e nomLeu3.chr20 205022 80 + 85365473 T a score=115327.000000 s hg38.chr7_KI270899v1_alt 181059 25 + 190869 CCCGTCTGCCCCCCTCATTCCTGGG s panTro5.chr7_NW_015973580v1_random 56426 25 - 83720 CCCGTCTGCCCCCCTCATTCCTGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570964 24 + 162613886 CCCGTCTG-CCCCCTCATTCCTGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142391 25 - 432965 CCCGTCTGCCCCCCTCATTCCTGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204942 25 + 85365473 CCCGTCTGTCCCCCTCATTCCTGGG i nomLeu3.chr20 T 80 C 0 s rheMac8.chr3 34052224 22 + 185818997 CC--GTCGT-CCCCTCATTCCTGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669398 25 + 192294377 CCCATCTGTCCCCCTCATTCCTGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436632 24 - 9440265 CCCGTCCGT-CCCCTCATTCCTGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026495 25 - 21915920 CCCATCTGTCCCCCTCATCCCTGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155922 25 - 21531802 CCCGTCTGCCCCCCTCATTCCTGGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193115 25 - 2515279 CCCATCTGTCCCCCTCATTCTTGGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348658 25 + 6586416 TCCATCTGTCCCCATCATTTCTGGG i colAng1.NW_012117710v1 C 0 C 0 e otoGar3.GL873611 2284203 35 - 8137123 I e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C a score=17434.000000 s hg38.chr7_KI270899v1_alt 181084 4 + 190869 GAGC s panTro5.chr7_NW_015973580v1_random 56451 4 - 83720 GAGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570988 4 + 162613886 GATC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142416 4 - 432965 GAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 204967 4 + 85365473 GGGC i nomLeu3.chr20 C 0 I 51 s rheMac8.chr3 34052246 4 + 185818997 GACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669423 4 + 192294377 GAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436656 4 - 9440265 GACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026520 4 - 21915920 GACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155947 4 - 21531802 GACC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193140 4 - 2515279 GAGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348683 4 + 6586416 GACC i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2284238 4 - 8137123 AAGC i otoGar3.GL873611 I 35 C 0 e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C a score=27219.000000 s hg38.chr7_KI270899v1_alt 181088 6 + 190869 CCGTCT-- s panTro5.chr7_NW_015973580v1_random 56455 6 - 83720 CCACCT-- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570992 6 + 162613886 CCATCT-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142420 6 - 432965 CCACCT-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 205022 6 + 85365473 CCGTCT-- i nomLeu3.chr20 I 51 C 0 s rheMac8.chr3 34052250 6 + 185818997 CCATCT-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669427 6 + 192294377 CCATCT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436660 6 - 9440265 CCATCT-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026524 6 - 21915920 CCATCT-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155951 6 - 21531802 CCATCT-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193144 6 - 2515279 CCATCT-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348687 6 + 6586416 CTGTCT-- i colAng1.NW_012117710v1 C 0 C 0 s otoGar3.GL873611 2284242 5 - 8137123 ---TCTCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e aotNan1.NW_018514293v1 150465 53 + 376347 I e saiBol1.JH378296 395674 0 - 2409723 C e cebCap1.NW_016107703v1 556851 0 - 2125214 C e calJac3.chrUn_GL286444 82715 0 + 138751 C a score=43683.000000 s hg38.chr7_KI270899v1_alt 181094 7 + 190869 G--------------------------------CCCCCC s panTro5.chr7_NW_015973580v1_random 56461 7 - 83720 G--------------------------------CCCCAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 570998 7 + 162613886 G--------------------------------TCCCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142426 7 - 432965 G--------------------------------CCCCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 205028 7 + 85365473 G--------------------------------TCCCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34052256 7 + 185818997 G--------------------------------TCCCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669433 7 + 192294377 G--------------------------------TCCCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436666 7 - 9440265 G--------------------------------TCCCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026530 7 - 21915920 G--------------------------------TCCCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 155957 39 - 21531802 GTCCCCTCATTCCTGGGGAGACCCTCCCATCCATCCCCC i chlSab2.chr28 C 0 I 33 s manLeu1.NW_012101810v1 193150 7 - 2515279 G--------------------------------TCTCTC i manLeu1.NW_012101810v1 C 0 I 512 s colAng1.NW_012117710v1 348693 7 + 6586416 G--------------------------------TCCCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82715 7 + 138751 G--------------------------------TCCCCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395674 7 - 2409723 g--------------------------------cccccc i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 150518 7 + 376347 G--------------------------------CCCCCC i aotNan1.NW_018514293v1 I 53 C 0 s otoGar3.GL873611 2284247 7 - 8137123 G--------------------------------CTCCCC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e cebCap1.NW_016107703v1 556851 0 - 2125214 C a score=29251.000000 s hg38.chr7_KI270899v1_alt 181101 5 + 190869 TCAT-T s panTro5.chr7_NW_015973580v1_random 56468 5 - 83720 TCAT-T i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571005 5 + 162613886 TCAT-T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142433 5 - 432965 TCAT-T i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 205035 5 + 85365473 TCAT-T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34052263 5 + 185818997 CTCA-T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669440 5 + 192294377 TCAT-T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436673 6 - 9440265 CCTCAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026537 5 - 21915920 TCAT-C i cerAty1.NW_012002954v1 C 0 I 167 s chlSab2.chr28 156029 5 - 21531802 TCAT-C i chlSab2.chr28 I 33 C 0 s manLeu1.NW_012101810v1 193669 5 - 2515279 TCAT-T i manLeu1.NW_012101810v1 I 512 C 0 s colAng1.NW_012117710v1 348700 5 + 6586416 TCAT-C i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82722 5 + 138751 TCAT-A i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395681 5 - 2409723 tcat-t i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556851 5 - 2125214 CCAT-T i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 150525 5 + 376347 TCAT-T i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2284254 5 - 8137123 TCAT-T i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I a score=81620.000000 s hg38.chr7_KI270899v1_alt 181106 9 + 190869 CCTGGGGGG s panTro5.chr7_NW_015973580v1_random 56473 9 - 83720 CCTGGGGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571010 9 + 162613886 CCTGGGGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142438 9 - 432965 TCTGGGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 205040 9 + 85365473 CCTGGGGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34052268 8 + 185818997 CCTGGGAG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33669445 9 + 192294377 CTTGGGGAG i macFas5.chr3 C 0 M 3543 s macNem1.NW_012019910v1 4436679 9 - 9440265 CCTGGGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026709 9 - 21915920 CCTGGGGAG i cerAty1.NW_012002954v1 I 167 C 0 s chlSab2.chr28 156034 9 - 21531802 CCTGGGGAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193674 9 - 2515279 CCTGGGGAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348705 9 + 6586416 CCTGGGGAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82727 9 + 138751 CCTGGGGAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395686 9 - 2409723 cctggggag i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556856 9 - 2125214 CCTGGGGAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 150530 9 + 376347 CCTGGGGAG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2284259 8 - 8137123 CCTGGGAG- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I a score=247176.000000 s hg38.chr7_KI270899v1_alt 181115 29 + 190869 CCCGTCTGTCCCAGGGC---TTTGCATACTGA-- s panTro5.chr7_NW_015973580v1_random 56482 29 - 83720 CCCGTCTGTCCCAGGGC---TTTGCATACTGA-- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571019 29 + 162613886 CCCGTCTGTCCCAGGGC---TTTGCATACTGA-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142447 29 - 432965 CCCGTCTGTCCCAGGGC---TTTGCATACTGA-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 205049 29 + 85365473 CCCATCTGTCCCAAGGC---TTTGCATACTGA-- i nomLeu3.chr20 C 0 M 1942 s rheMac8.chr3 34052276 29 + 185818997 CCCATCTGTCCCAGAGC---TTTGCACACTGA-- i rheMac8.chr3 C 0 I 1 s macNem1.NW_012019910v1 4436688 29 - 9440265 CCCATCTGTCCCAGAGC---TTTGCACACTGA-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026718 29 - 21915920 CCCATCTGTCCCAGAGC---TTTGCACACTGA-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156043 29 - 21531802 CCCATCTGTCCCAGGGC---TTTGCACACGGA-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193683 29 - 2515279 CCCATCTGTCCCAGAGC---TTTGCACACTGA-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348714 29 + 6586416 TCCATCTGTCCCAGGGC---TTTGCACACGGA-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82736 29 + 138751 CCCATCTGTCCTATGGC---TTTGCACACTGA-- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395695 29 - 2409723 cccatctgtcccatggc---tttgcatacTGA-- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556865 29 - 2125214 CCCATCTGTCCCATGGC---TTTGCACACTGA-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 150539 29 + 376347 CCCATCTGTCCCATGGC---TTTGCACATTGA-- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2284267 33 - 8137123 CGCATCCA-CACATGGCTTTTTTGCATGTTCCAA i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M a score=295043.000000 s hg38.chr7_KI270899v1_alt 181144 43 + 190869 GGCCTCGCAATCCACAAGC--TTTCCTAATTCCCAGCTCATCC-AC s panTro5.chr7_NW_015973580v1_random 56511 43 - 83720 GGCCTCGCAATCCACAAGC--TTTCGTAATTCCCAGCTCATCC-AC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571048 43 + 162613886 GGCCTCGCAATCCACAAGC--TTTCCTAATTCCCAGCTCATCC-AC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142476 43 - 432965 GGCCTTGCAATCCACAAGC--TTTCCTAATTCCCAGCTCATCC-AC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052306 46 + 185818997 GGCCTCGGAATCCACAAGCTTTTTCCTAAATTCCAACACATCCAAC i rheMac8.chr3 I 1 C 0 s macNem1.NW_012019910v1 4436717 45 - 9440265 GGCCTCGGAATCCACAAGCTTTTTCCTAATTCCCAACACATCC-AC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026747 45 - 21915920 GGCCTCGGAATCCACAAGCTTTTTCCTAATTCCCAACACATCC-AC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156072 43 - 21531802 GGCCTCGGAATCCACAAGCTTTTTCCTAATTCCCA--ACATCC-AC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193712 45 - 2515279 GGCCTCGGAATCCACAAGCTTTTTCCTAATTCCCAACACATCC-AC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348743 44 + 6586416 GGCCTCGGAATCCACAAGCTTTTTCCT-ATTCCCAACACATCC-AC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82765 45 + 138751 GGCCTCGCAATCCAGAAGCAGTTTCCTCATTTCCAGCACATCC-AA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395724 45 - 2409723 GGCCTCGCAATCCACAAGCAGTTTCCTCATTCCCAGCACATCC-AA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 556894 45 - 2125214 GGCCTTGCAATCCACAAGCAGTTTCCTCATTCCCAGCACATCC-AA i cebCap1.NW_016107703v1 C 0 I 32 s aotNan1.NW_018514293v1 150568 45 + 376347 GGCCTCGCAATCCACAAGCAGTTTCCTCATTCCCAGCACATTC-AA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2284300 45 - 8137123 GGACTCACAGTCCAAAGTCAGGTTCCTAATCCCCAGCACCTAA-AG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=44297.000000 s hg38.chr7_KI270899v1_alt 181187 14 + 190869 -----------------ATGACAACAGCCCT s panTro5.chr7_NW_015973580v1_random 56554 14 - 83720 -----------------ATGACAACAACCCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571091 14 + 162613886 -----------------ATGACAACAGCCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142519 13 - 432965 -----------------ATGACAACAGCCC- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052352 14 + 185818997 -----------------ATGACAGCAGCCGT i rheMac8.chr3 C 0 I 17 s macNem1.NW_012019910v1 4436762 14 - 9440265 -----------------ATGACAGCAGCCCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026792 14 - 21915920 -----------------ATGACAGCAGCCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156115 14 - 21531802 -----------------ATGACAGCAGCCCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193757 14 - 2515279 -----------------ATGACAGCAGCCCG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348787 14 + 6586416 -----------------ATGACAGCAGCCCG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82810 12 + 138751 -------------------GGTAGCAGCTTC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395769 12 - 2409723 -------------------GATAGCGGTTTC i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 150613 12 + 376347 -------------------GATAGCGGCTTT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2284345 31 - 8137123 CTGCTCAGAGAACAGGTCAGATAACAGCCCT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61072930 475 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e cebCap1.NW_016107703v1 556939 32 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=58054.000000 s hg38.chr7_KI270899v1_alt 181201 19 + 190869 TCCCC-GGGGGCTCTGGCCG s panTro5.chr7_NW_015973580v1_random 56568 19 - 83720 TCCCC-GGGGGCTCTGGCCG i panTro5.chr7_NW_015973580v1_random C 0 I 1 s panPan2.chr7 571105 19 + 162613886 TCCCC-GGGGGCTCTGGCCG i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01015914v1 142532 19 - 432965 TCCCC-GGGGGCTCTGGCCG i gorGor5.CYUI01015914v1 C 0 I 1 s macNem1.NW_012019910v1 4436776 16 - 9440265 ---TC-CGGGACTCCGGCTG i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 17026806 16 - 21915920 ---TC-CGGGGCTCCGGCTG i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr28 156129 8 - 21531802 ---TCACAGGG--------- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193771 16 - 2515279 ---TC-CGGGGCTCCGGCTG i manLeu1.NW_012101810v1 C 0 I 1 s colAng1.NW_012117710v1 348801 12 + 6586416 ---TC-CGGGGCTCCG---- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82822 19 + 138751 TTTCC-TGGGGCTCTGGCTG i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 395781 19 - 2409723 TTTCC-CAGGGCTCCGGCTG i saiBol1.JH378296 C 0 I 1 s aotNan1.NW_018514293v1 150625 19 + 376347 TTTCC-CGGGGCTCTGGCTG i aotNan1.NW_018514293v1 C 0 I 1 s otoGar3.GL873611 2284376 17 - 8137123 --CTC-TAGGGCTCTGGCTG i otoGar3.GL873611 C 0 I 6 e canFam3.chr6 61072930 475 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e rheMac8.chr3 34052366 17 + 185818997 I e cebCap1.NW_016107703v1 556939 32 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=486161.000000 s hg38.chr7_KI270899v1_alt 181220 74 + 190869 ACCTCCCTTCGTCCTCACC---ACACAGCTGCTCTCCCTGCCCCGCCCT----------TAGCCCTCC-TTAGACCCATCCACCCGGC s panTro5.chr7_NW_015973580v1_random 56588 74 - 83720 ACCTCCCTTCGTCCTCACC---ACACAGCTGCTCTCCCTGCCCCGCCCT----------CAGCCCTCC-TTAGACCCATCCACCCGGC i panTro5.chr7_NW_015973580v1_random I 1 C 0 s panPan2.chr7 571125 74 + 162613886 ACCCCCCTTCGTCCTCACC---ACACAGCTGCTCTCCCTGCCCCGCCCT----------CAGCCCTCC-TTAGACCCATCGACCCGGC i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01015914v1 142552 74 - 432965 ACCTCCCTTCGTCCTCACC---ACACAGCTGCTCTCCCTGCCCAGCCCT----------CAGCCCTCC-TTAGACACATCCACCTGGC i gorGor5.CYUI01015914v1 I 1 C 0 s rheMac8.chr3 34052383 74 + 185818997 ACCTCCCTCCGTCCTCACC---ACACAGCTGCTCTACCTGCCCCACCCT----------CAGCTCCTC-TCAGCCACACCCACCTGGA i rheMac8.chr3 I 17 C 0 s macNem1.NW_012019910v1 4436793 74 - 9440265 ACCTCCCTCCATCCTCACC---ACACAGCTGCTCTCCCTGCCCCACCCT----------CAGCCCTCC-TCAGACCCACCCACCCGGA i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 17026823 74 - 21915920 ACCTCCCTCCGTCCTCACC---ACACAGCTGCTCTCCTTGCCCCACCCT----------CAGCCCTCC-TCAGACCCACCCACCCGGA i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr28 156137 68 - 21531802 ------CTCCGTCCTCACC---ACACAGCTGCTCTCCCTGCCCCACCCT----------CAGCCCTCC-TCAGACCCCCCCACCCGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193788 74 - 2515279 ACCTCCCTCCGTCCTCACC---ACACAGCTGCTCTCCCTGCCCCACCCT----------CAGCCCTCC-TCAGACCCACCCACCCGGA i manLeu1.NW_012101810v1 I 1 C 0 s colAng1.NW_012117710v1 348813 67 + 6586416 -------TCCGTCCTCACC---ACACAGCTGCTCTCCCTGCCCCACCCT----------CAGCCCTCC-TCAGACCCACCCACCCGGA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82842 74 + 138751 ATCTCCCTACATCCTCACC---GCACAGCGGCCTTCCCTGCCCATCCTT----------CGGCCCTCC-TTAGACCCACCCAGCTGGT i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 395801 73 - 2409723 ACCTCTCTACATCCTCACT---GCACAGC-TCCCTCCCTGCCTGGCCTT----------CAGCCCCCC-TTAGACCCACCCAGCTGCT i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 556971 74 - 2125214 ACCTCCCTACATCCTCACC---GCACAGCGGCCCTCCCTGCCCGGCCTT----------TGGCCCTCC-TTAGACCCACCCAGCTGGT i cebCap1.NW_016107703v1 I 32 C 0 s aotNan1.NW_018514293v1 150645 74 + 376347 ACCTCCCTACATCCTCACC---ACACAGCGGCCCTCCCCGCCCGGCCTT----------CGGACCTCC-TTAGACCCACCCAGCTGGT i aotNan1.NW_018514293v1 I 1 C 0 s otoGar3.GL873611 2284399 87 - 8137123 AATCCCCCCCACCCTCAACCTTGCACAGCTGGTCT-CTTATCCCACCTTGGCTGTGGTCCAGCCCTCCATCTGGTCTCCCTGTATCTG i otoGar3.GL873611 I 6 C 0 e canFam3.chr6 61072930 475 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=1306356.000000 s hg38.chr7_KI270899v1_alt 181294 203 + 190869 CCCTAGGTGAGCCTCTCCCGACCCAAGAC--CCAGCGT-CGTCCCTCTGTCCCCAG-CCTTCCCACGG-CCCCCTCACTCAGGAC-GCAGCCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGCAGACCT----------TACAGAGGCCACTTGGCCCCTCACACAATGC---------------CCACCTCAcaggccttctctc-----------------cccgcagagg--gtca-ga-cat-gcccctg--cccca--gccttggc s panTro5.chr7_NW_015973580v1_random 56662 203 - 83720 CCCTAGGTGAGCCTCTCCCCACCCAAGAC--CCAGTGT-CGTCCCTCTGTCCCCAG-CCTTCCCACGG-CCCCCTCACTCAGGAC-GCAGCCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGCAGACCT----------TACAGAGGccacttggcccctcacacaatgc---------------ccacctcacaggccttctctc-----------------cccgcagagg--gtca-ga-cat-gcccctg--cccca--gccttggc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571199 203 + 162613886 CCCTAGGTGAGCCTCTCCCCACCCAAGAC--CCAGTGT-CGTCCCTCTGTCCCCAG-CCTTCCCACGG-CCCCCTCACTCAGGAC-GCAGCCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGCAGACCT----------TACAGAGGCCACTTAGCCCCTCACACAATGC---------------CCACCTCACAGGCCTTCTCTC-----------------CCCGCAGAGG--GTCA-GA-CAT-GCCCCTG--CCCCA--GCCTTGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142626 203 - 432965 CCCTAGGTGAGCCTCTCCCGACCCAAGAC--CCAGGGT-CGTCCCTCTGTCCCCAG-CCTTCCCACGG-CCCCCTCACTCAGGAC-ACAGCCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGCAGACCT----------TACAGAGGccacttggcccctcacacaatgc---------------ctacctcacaggccttctctc-----------------cccgcagagg--gtca-ga-cat-gcccctg--cccca--gccttggc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052457 201 + 185818997 CCCTAGGTGAGC--TCTCCGACCC-AGCC--CCAGGGTCCATCCCTCTGT-CCCAGCCCCCCCCACGG----CCTCAGTCGGGACAACAACCCAC----------------------------------------------AGCCTGGCCCCCA--------CCTGCGGACCT----------TACAGAGGCTACTTGGGCCCTCACCCAATGC---------------CCACCTCACAGGACTTCT-TC-----------------CCCGCAGAGA--GCCA-AACCATGGCCCCTG--CCCCA--GCCTTGGC i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4436867 203 - 9440265 CCCTAGGTGAGCCTCTCCCGACCCAAGCC--CCAGGGT-CATCCCTCTGTCCCCAGCCCCCCCCACGG--CCCCTCAGTCGGGAC-ACAACCCAC----------------------------------------------ATCCTGG-CCCCA--------CCTGCAGACCT----------TACAGAGGCTACTTGGGCCCTCACCCAATGC---------------CCACCTCACAAGACTTCTCTC-----------------CCCGCAGAGG--GCCA-AA-CAT-GCCCCTG--CCCCA--GCCTTGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17026897 202 - 21915920 CCCTAGGTGAGCCTCTCCCGACCCAAGCC--CCAGGGT-CATCCCTCTGTCCCCAG-CCCCCCCACGG--CCCCTCACTCGGGAC-ACAACCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGCGGACCT----------TACAGAGACTACTTGGGCCCTCACCCAATGC---------------CCACCTCACAGGACTTCTCTC-----------------CCCGCAGAGG--GCCA-Aa-cat-gctcctg--cccca--gccttggc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156205 202 - 21531802 CCCTAGGTGAGCCTCTCCTGACCCAAGCC--CCAGGGT-CGTCCCTCTGTCCCCAG-CCCCGCCACGG--CCCCTCACTCGGGAC-ACAACCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGCGGAACT----------TACAGAAGCTACTTGGCCTCTCACCCAATGC---------------CCACCTCACAGGCCTTCTCTC-----------------CCTGCAGAGG--GCCA-AA-CAT-GCCCCTG--CCCCA--GCCTTGGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 193862 203 - 2515279 CCCTAGGTGAGCCTCTCCCGACCCAAGCC--CCAGGGT-CATCCCTCTGTCCCCAGCCCCCACCACGG--CCCCTCACTCGGGAC-ACAACCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGCGGACCT----------TACAGAGGCTACTTGGGCCCTCACCCAATGC---------------CCACCTCACAGGACTTCTCTC-----------------CCCGCAGAGG--GCTA-AA-CAT-GCCCCTG--CCCCA--GCCTTGGC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 348880 203 + 6586416 CCCTAGGTGAGCCTCTCCCGACCCAAGCC--CCAGGGT-CATCCCTCTGTCCCCAG-CCCTCCCACGG-CCCCCTCACTCAGGAC-ACAACCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGCGGACCT----------CGCAGAGGCTACTTGGCCCCTCACCCAATGC---------------CCACCTCACAGGCCTTCTCTC-----------------CCCGCAGAGG--GTGA-AA-CAT-GCCCCTG--CCCCA--GCCTTGGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 82916 197 + 138751 CCCTAGGTGAGCCTCCCCC------CGAC--CCAAGGC-TGTTTCTCTGTCTCCAA-CCCTCCCACGGCCCCTCTCACTCGGGAC-ACAGCCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGTGGACCT----------CACAGAGGCCACTTGGCCCCTCACTTAATGC---------------CCA-TTCACAGGCCTTCTCTC-----------------CCCACAGAGG--GTCA--A-CAT-GCTTCTG--CCCCA-GGCCTTGGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 395874 203 - 2409723 CCCTAGGGGAGCCTCCCCCGACCTAAGAC--CCACTGC-CATTTCTCTGTCTCCAG-CCCGCCCACGGCCCCTCTCACTCGGGAC-ACAGCCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGTGGACCT----------CACAGAGGCCACTTGGCTCCTCACTCAATGC---------------CCA-CTCACAGGCCTTCTCTC-----------------CCCACAGGGG--GTCA--A-CAT-GCCTCCG--CCCCA-GGCCTTGGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 557045 201 - 2125214 CCCTAGGTGAGCCTCCCCCAACCTAAGGC--CCGCGGA-TGTT--TCTGTCTCCAG-CCCTCCCACAGCCCCTCTCACTTGGGAC-ACAGCCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGTAGACCT----------CACAGAGGCCATCTGGCCGCTCACTCAATGC---------------CCA-CTCACAGGCCTTCTCTC-----------------CCCACAGAGG--GTCA--A-CAT-GCCTCTA--CCCCA-GGCCTTGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 150719 203 + 376347 CCCTAGGTGAGCCTCCCCCGACCCAAGGC--CCGCGGA-CATTTCTCTGCCTCCAG-CCCTCCCACGGCCCCTCTCACTCGGGAC-ACAGCCCAC----------------------------------------------AGCCTGG-CCCCA--------CCTGTGGACCT----------CACAGAGGCCACTTGGCCCCTCACTCAACGC---------------CCA-CTCACAGGCCTTCTCTC-----------------CCCACGGAGG--GTCA--A-CAC-GCCTCCG--CCCCA-GGCCTTGGC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2284486 293 - 8137123 CCCCAG--AAGCCTCCCCT-ATCTGAGTC--T---GTT-TCCCTCTGTGTTCTCAG-CCCTGGAATGG-CCTCTGCAAATAGGAC-CCACCCCAAAAGCCACCATGCCCAGGCCCTGCACACCCTCCTAAGTGTGACCTTGAgcatgc-ccccaggccagggcctttgcactttcaggttctctactgagaacact--GCCCCACACTTATTGCTTCAAGTACAAGTTTCTA-TCCACAGACCCTCTTCtgaacccagaacattgaggctgcagtga--gctataa-tgt-cccactgcactcta--gccctggc i otoGar3.GL873611 C 0 I 153 s canFam3.chr6 61073405 159 - 77573801 CCCCAAGCCAGCCTTTCCTGCCCTGAGGCTACCA-----CGTCTCTCTGTCTCTA--TCGTCTGGTGG--CTGCTG----------GCCTCCTGT----------------------------------------------GGGTTGC-CCTAG--------CCTGCTGTCTC----------CA------------------TCACTCAATTC---------------CAA-----------------C-----------------CTTGAGgaaactgcca-ga-cat-catccca--tcctaggaccgtgtc i canFam3.chr6 I 475 C 0 e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=475328.000000 s hg38.chr7_KI270899v1_alt 181497 79 + 190869 atttcca--------------------ccccgcaggcctccacggggctga-gccctcaggtaccagcttctgtgcaaa-gcc----------------------------a--tgcctggaggccttcct s panTro5.chr7_NW_015973580v1_random 56865 107 - 83720 atttcca--------------------ccccgcaggcctccaaggggctga-gccctcaggtaccagcttctgtgcaaa-gccttgtacctttgcactcaggtgcaaagcca--tgcctggaggccttccc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571402 79 + 162613886 ATTTCCA--------------------CCCCGCAGGCCTCCAAGGGGCTGA-GCCCTCAGGTACCAGCTTCTGAGCAAA-GCC----------------------------A--TGCCTGGAGGCCTTCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142829 79 - 432965 atttcca--------------------ccctgcaggcctccaaggggctga-gccctcaggtaccagcttctgtgcaaa-gcc----------------------------a--tgcctggaggccttccc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052658 80 + 185818997 ACCTCCAG-------------------CCCCACAGGCCTCCAAGGGGCTGA-GCCCTCAGGTACAAGCTTCTGTGCAAA-GCC----------------------------A--TGCCCGgaggccttccc i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437070 80 - 9440265 ACCTCCAG-------------------CCCCACAGGCCTCCAAGGGGCTGA-GCCCTCAGGTACAAGCTTCTGTGCAAA-GCC----------------------------A--TGCCCGGAGGCCTTCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027099 80 - 21915920 acctccag-------------------ccccacaggcctccaaggggctga-gccctcaggtacaagcttctgtgcaaa-gcc----------------------------a--tgcccggaggccttccc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156407 80 - 21531802 ACCTCCAG-------------------CCCCACAGGCCTCCAAGGGGCTGA-GCCCTCAGGTACAAGCCTCTGTGCAAA-GCC----------------------------A--GGCCCGGAGGCCCTCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194065 80 - 2515279 ACCTCCAG-------------------CCCCACAGGCCTCCAAGGGGCTGA-GCCCTCAGGTACAAGCTTCTGTGCAAA-GCC----------------------------A--TGCCCGGAGGCCTTCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349083 80 + 6586416 ACTTCCAG-------------------CCCCACAGGCCTCCAAGGGGCTGA-GCCCTCAGGTACAAGCTTCTGTGCAAA-GCC----------------------------A--TGCCTGGAGGCCTTCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83113 63 + 138751 ATTTCCA------------------------------------CGGGCTCA-GCCCACAGGTACAAGCTTCTGTGTAAA-GTC----------------------------A--TGCCCAGGGGCCTTCCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 396077 63 - 2409723 ATTTCCA------------------------------------GGAGCTCA-GCCCACAGGTACAAGTTTCTGTGCAAA-GTC----------------------------A--TGCCCAGGGGCCTTCCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 557246 63 - 2125214 ATTTCCA------------------------------------GGGGCTCA-GCCCACGGGTACAAGCTTCTATGCAAA-GTC----------------------------A--TGCCCAGGGGCCTTCCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 150922 63 + 376347 ATTTCCA------------------------------------GGGGCTCA-GCCCACAGGCACAAGCTTCTGTGCAAA-GTC----------------------------A--TGCCCAGGGGCCTTCCC i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61073564 103 - 77573801 accttcagccccccacccagaccccattcccacagacctccaagttgcttattctttcatgtgcacatttctgaccaaatgtc----------------------------actttctcaggggtcttcct i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2284779 153 - 8137123 I e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=372034.000000 s hg38.chr7_KI270899v1_alt 181576 64 + 190869 gggccacgtggtctaagacag------c--aatcccctcacacccagagcaggcagccctccctgccc----gggc s panTro5.chr7_NW_015973580v1_random 56972 64 - 83720 ggaccacgtggtctaagacag------c--aatcccctcacacccagagcaggcagccctccctgccc----gggc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571481 66 + 162613886 GGACCACGTGGTCTAAGACAG------CAAAATCCCCTCACACCCAGAGCAGGCAGCCCTCCCCGCCC----GGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142908 64 - 432965 ggaccacgtgatctaagacag------c--aatcccctcacacccagagcaggcagccctccctgccc----aggc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052738 64 + 185818997 agaccacacggtctaagacag------c--aatcccctcacgcccagggcaggcggccctccctgccc----agcc i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437150 64 - 9440265 AGACCACACGGTCTAAGACAG------C--AATCCCCTCACGCCCAGGGCAGGCGGCCCTCCCTGCCC----AGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027179 64 - 21915920 agaccacacagtctaagacag------c--aatcccctcacgcccagggcaggcggccctccctgccc----agcc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156487 64 - 21531802 AGACCAGGCGGTCCAAGACAC------C--ACTCCCCTCACACCCAGGGCAGGCGGCCCCCCCTGCCC----GGCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194145 64 - 2515279 AGACCACACAGTCTAAGACAG------C--AATCCCCTCACGCCCAGGGCAGGCGGCCCTCCCTGCCC----AGCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349163 62 + 6586416 AGACCGTGTGGTCTAAG--AG------C--AATCCCCTCACACCCAGGGCAGGCGGCCCTCCCTGCCC----GGGC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83176 60 + 138751 AGACCACACAGTCTAAGACAG------C--AATCGCCTCACACCCAGAACAGACGCCAACCCCTGCCG-------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 396140 60 - 2409723 CGACCACACAGTCTAAGACAG------C--AATCCCCTCACACCCAGAACAGATGCCAGCCCCTGCCG-------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 557309 60 - 2125214 GGACCACACAGTCTAAGACAG------C--AATACCCTCACACCCAGAACAGACACCAACCCCTGCCA-------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 150985 64 + 376347 GGACCACACAGGCTAAGACGG------C--AATCCCCTCACACCCAGAACAGACGTCAACCCCTGCTGTGTC---- i aotNan1.NW_018514293v1 C 0 I 7 s otoGar3.GL873611 2284932 63 - 8137123 GGGCCAC-TAGCAtaaaatag------c--catctcctcacacccagaacttactacccttcctgtca----tacc i otoGar3.GL873611 I 153 C 0 s canFam3.chr6 61073667 41 - 77573801 --------tcacctcagccagaatgtcc--aattcactctctc--------ggctgcac----------------- i canFam3.chr6 C 0 C 0 e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=15675.000000 s hg38.chr7_KI270899v1_alt 181640 16 + 190869 c--gtcttattttcctat s panTro5.chr7_NW_015973580v1_random 57036 16 - 83720 c--gtcttattttcctat i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571547 16 + 162613886 C--GTCTTATTTTCCTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142972 16 - 432965 c--gtcttattttcctat i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052802 18 + 185818997 ccagtgttatttacctac i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437214 18 - 9440265 CCAGTGTTATTTACCTAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027243 18 - 21915920 ccagtgttatttacctac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156551 18 - 21531802 CCAGTGTTGTTTTCCTGC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194209 18 - 2515279 CCAGTGTTACTTACCTAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349225 18 + 6586416 CCAGTATTATTTTCCTAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83236 11 + 138751 --TGTCTAGTCTC----- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 396200 11 - 2409723 --TGTCTAGTCTC----- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 557369 11 - 2125214 --TGTCTAGTCTC----- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2284995 17 - 8137123 -catttttagttttgtac i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61073708 16 - 77573801 -caatttgattttcgac- i canFam3.chr6 C 0 C 0 e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151049 7 + 376347 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=879887.000000 s hg38.chr7_KI270899v1_alt 181656 116 + 190869 gtcattcctgtcaccacctggcG---CTCACCTTGG-CTAACTGGAGCTCCAGCCCCTTTGGACGAAAAGAGCTCCCAGAGCCACTCCCTGGTCTCTGAT-GGGGCTGTGT-GTCCTCTCCA- s panTro5.chr7_NW_015973580v1_random 57052 116 - 83720 gtcattcctgtcaccacctggcG---CTCACCTTGG-CTAACTGGAGCTCTAGCCCCTTCGGACGAAAAGAGCTCTCAGAGACCCTCCCTGGTCTCTGAT-GGGGCTGTGT-GTCCTCTCCA- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571563 116 + 162613886 GTCATTCCTGTCACCACCTGGCG---CTCACCTTGG-CTAACTGGAGCTCCAGCCCCTTCGGACGAAAAGAGCTCTCAGAGACCCTCCCTGGTCTCTGAT-GGGGCTGTGT-GTCCTCTCCA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 142988 116 - 432965 gtcattcctgtcaccacctggcG---CTCACCTTGG-CTAACTGGAGCTCCAGCCCCTTTGGATGAAAAGAGCTCCCAGAGCCACTCCCTGGTCTCTGAT-GGGGCTGTGT-GTCCTCTCCA- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052820 116 + 185818997 gtcactcctgtcaccacctggca---CTCACCTTGG-CTAACCGGAGCTCCAGCCCCTTTGGAAGAAAAGTGTTCCCAGAGCCACTCCCTGGTCTCTGAC-GGGGCCACGT-GTCCTCCCCA- i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437232 116 - 9440265 GTCACTCCTGTCACCACCTGGCA---CTCACCTTGG-CTAACCGGAGCTCCAGCCCCTTTGGAAGAAAAGTGTTCCCAGAGCCACTCCCTGGTCTCTGAC-GGGGCCACGT-GTCCTCCCCA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027261 116 - 21915920 gtcactcctgtcaccacctggca---CTCACCTTGG-CTAACCGGAGCTCCAGCCCCTTTGGAAGAAAAGTGTTCCCAGAGCCACTCCCTGGTCTCTGAC-GGGGCCATGT-GTCCTCCCCA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156569 117 - 21531802 GTCACTCCTGTCACCACCTGGCA---CTCACCGTGGCCCAACCGGAGCTCCAGCCCCTGTGGAAGCAAAGTGTCCTCAGAGCCACGCCCTGGTCTCTGAC-GGGGCCACGT-GTCCTCCCCA- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194227 116 - 2515279 GTCACTCCTGTCACCACCTGGCA---CTCACCTTGG-CTAACCGGAGCTCCAGCCCCTTTGGAAGAAAAGTGTTCCCAGAGCCACTCCCTGGTCTCTGAC-GGGGCCATGT-GTCCTCCCCA- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349243 116 + 6586416 GTCACTCCTGTCACCACCTGGCA---CACACCTTGG-CTAACTGGAGCTCCTGCCCCTTTGGAAGAAAAATGTTCCCAGAGCCACTCCCTGGTCTCTGAT-GGGGCCACGT-GTCCTCCCCA- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83247 107 + 138751 ATCATTCCTGTCACCACCTGATG---TTCACCTTGG-CTAAGC---------ACCCCTTTGAAAGAAGGAAGCCCTCAGAGCCACACCCTGGTCTCTAAT-GGGGCTGCGT-TTCCTCTCCA- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 396211 116 - 2409723 GTCATTCCTGTCACCACCTGATG---TTCACCTTGG-CTAACTGGCGCTCCAGCCCCTTTGAAAGAAGGAAGCCCTCAGAGCCACACCCTGGTCTCTGAT-GGGGCCGTGT-TTCCTCTCCA- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 557380 116 - 2125214 CTCATTCCCGTCGCCACCTGTTG---TTCACCTTGG-CTAACTGGCGCTCCAGCCCCTTTGAAAGAAGGAAGCCCTCAGGGCCACACCCTGGTCTCTGAT-GGGGCCGTGT-TTCCTCTCCA- i cebCap1.NW_016107703v1 C 0 I 43 s aotNan1.NW_018514293v1 151056 116 + 376347 GTCATTCCCGTCACCACCTGATG---TTCACCTTGG-CTAACTGGCGCTCCAGCCCCTCTGAAAGAAGGAAGCCCTCAGAGCCACGCCCTGGTCTCTGAT-GGGGCCGTGT-TTCCTCTCCA- i aotNan1.NW_018514293v1 I 7 I 42 s otoGar3.GL873611 2285012 112 - 8137123 gtaactcttgtcactatttgacatattttacattgg-cttattGGA--------CCCTTTAGAAGAAGAAAGACCCCAGAACCAC-CCTTGGTGTCTGATGGGGGCCACATCATTACCTCCA- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61073724 101 - 77573801 ataattcttgttaccacctgacttattttacatCAG-TTCATTGGAGCTCCAGCCCC-------------------CAGAACTGTTCCCTGGTCTCTGAC-AAGGCCTCAT-GTCAGTCCCCT i canFam3.chr6 C 0 C 0 e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=118759.000000 s hg38.chr7_KI270899v1_alt 181772 23 + 190869 GGTGCCCTCCC-------C--GACAG-CCAGCC----- s panTro5.chr7_NW_015973580v1_random 57168 23 - 83720 GGTGCCCTCCC-------C--GACAG-CCAGCC----- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571679 23 + 162613886 GGTGCCCTCCC-------C--GACAG-CCAGCC----- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143104 23 - 432965 GGTGCCCTCCC-------C--GACAG-CCAACC----- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052936 23 + 185818997 GGTGCCCTCCC-------C--GACAG-CCAGCC----- i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437348 23 - 9440265 GGTGCCCTCCC-------C--GACAG-CCAGCC----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027377 23 - 21915920 GGTGCCCTCCC-------T--GACAG-CCAGCC----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156686 23 - 21531802 GGTGCCCGCCC-------C--GACAG-CCAGCC----- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194343 23 - 2515279 GGTGCCCTCCC-------C--GACAG-CCAGCC----- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349359 23 + 6586416 GGTGCCCTCCC-------C--AGCAG-CCAGCC----- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83354 30 + 138751 TGTGTCTCCCCACCTGCAC--AGCAG-CCATCC----- i calJac3.chrUn_GL286444 C 0 I 13 s saiBol1.JH378296 396327 30 - 2409723 TTTGTCTCCCTGCCGGCAC--GACAG-CCATCC----- i saiBol1.JH378296 C 0 I 13 s otoGar3.GL873611 2285124 25 - 8137123 GGTGCCCTCCC-------T-GGACAGCCCAGCC----- i otoGar3.GL873611 C 0 I 13 s canFam3.chr6 61073825 31 - 77573801 GGGGCCCTTCC-------CAGAGCAGCCCAGCCTGGCC i canFam3.chr6 C 0 C 0 e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151172 42 + 376347 I e cebCap1.NW_016107703v1 557496 43 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=369073.000000 s hg38.chr7_KI270899v1_alt 181795 45 + 190869 CCTCCGCCTCTG---------CACAAGG--GAG-GGCCCAGGGAGGCTCAGGGCctg s panTro5.chr7_NW_015973580v1_random 57191 45 - 83720 CCTCCGCCTCTG---------CACAAGC--GAG-GGCCCAGGGAGGCTCAGGGCctg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571702 45 + 162613886 CCTCCGCCTCTG---------CACAAGC--GAG-GGCCCAGGGAGGCTCAGGGCCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143127 45 - 432965 CCTCCGCCTCTG---------CACAAGG--GAG-GGCCCAGGGAGGCTCAGGGCctg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34052959 45 + 185818997 CCTCTGCCTCCG---------CACAAGG--GAG-GGCCCAGGGAGGCTCAGGACctg i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437371 45 - 9440265 CCTCTGCCTCCG---------CACAAGG--GAG-GGCCCAGGGAGGCTCAGGACCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027400 45 - 21915920 CCTCTGCCTCCG---------CACAAGG--GAG-GGCCCAGGGAGGCTCAGGACCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156709 45 - 21531802 CCTCTGCCTCCG---------CACAAGG--GAG-GGCGCAGGGAGGCTCAGGACCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194366 45 - 2515279 CCTCTGCCTCCG---------CATAAGG--GAG-GGCCCAGGGAGGCTCAGGACCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349382 45 + 6586416 CCTCTGCCTCCG---------CACAAGG--GAG-GGCCCAGGGAGGCTCAGGACCTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83397 45 + 138751 CCTTGGCCTCTG---------CACAAAG--GAG-GGTTCAGGGAGGCTCAGGACCTG i calJac3.chrUn_GL286444 I 13 C 0 s saiBol1.JH378296 396370 45 - 2409723 CCTCAGCCTCTG---------CACAAGG--GAG-GGCTCAGGGAGACTCAGGACCtg i saiBol1.JH378296 I 13 C 0 s cebCap1.NW_016107703v1 557539 45 - 2125214 CCTCGGCCTCTG---------CACAAGG--GAG-GGCTCAGGGAGGCTCAGGACCtg i cebCap1.NW_016107703v1 I 43 C 0 s aotNan1.NW_018514293v1 151214 45 + 376347 CCTCGGCCTCTG---------CGCAAGG--GAG-GGCTCAGGGACGCTCGGGACCTG i aotNan1.NW_018514293v1 I 42 C 0 s otoGar3.GL873611 2285162 51 - 8137123 CCTCTATCCATG-----GAGCTACAAGGCAGAG-GCCTAAGGGCAGTCCATGCCCtg i otoGar3.GL873611 I 13 C 0 s canFam3.chr6 61073856 55 - 77573801 CCCAGGCCTTTGTCCAGAGACCATAAGG--CAGAAGCCTGAGGAGCTTCAGGCACTA i canFam3.chr6 C 0 C 0 e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=90735.000000 s hg38.chr7_KI270899v1_alt 181840 16 + 190869 tgt----------------------------ggctgtgtgtgtg s panTro5.chr7_NW_015973580v1_random 57236 16 - 83720 tgt----------------------------ggctgtgtgtgtg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571747 16 + 162613886 TGT----------------------------GGCTGTGTGTGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143172 16 - 432965 tgt----------------------------ggctgtgtgtgtg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053004 16 + 185818997 tgt----------------------------ggctgtgtgtgtc i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437416 16 - 9440265 TGT----------------------------GGCTGTGTGTGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027445 16 - 21915920 TGT----------------------------GGCTGTGTGTGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156754 16 - 21531802 TGT----------------------------GTCTGTGTGTGTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194411 16 - 2515279 TGT----------------------------GGCTGTGTGTGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349427 16 + 6586416 TGT----------------------------GGCTGTGTGTGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83442 44 + 138751 TGTGTGACACtgtgtgtgtgtctatgtgcgtggctgtgtgtgtg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 396415 18 - 2409723 tgt--------------------------gtggctgcgtgtgtg i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 557584 18 - 2125214 tgt--------------------------atggctgtgtgtgtg i cebCap1.NW_016107703v1 C 0 I 1580 s aotNan1.NW_018514293v1 151259 18 + 376347 CGC--------------------------Atggctgtgtgtatg i aotNan1.NW_018514293v1 C 0 I 24 s canFam3.chr6 61073911 14 - 77573801 TGT----------------------------GCACgtgtgca-- i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2285213 0 - 8137123 C e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=7098.000000 s hg38.chr7_KI270899v1_alt 181856 1 + 190869 t s panTro5.chr7_NW_015973580v1_random 57252 1 - 83720 t i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571763 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143188 1 - 432965 t i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053020 1 + 185818997 t i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437432 1 - 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027461 1 - 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156770 1 - 21531802 T i chlSab2.chr28 C 0 I 199 s manLeu1.NW_012101810v1 194427 1 - 2515279 T i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349443 1 + 6586416 T i colAng1.NW_012117710v1 C 0 I 2 s calJac3.chrUn_GL286444 83486 1 + 138751 t i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 396433 1 - 2409723 t i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 151301 1 + 376347 t i aotNan1.NW_018514293v1 I 24 C 0 e otoGar3.GL873611 2285213 0 - 8137123 C e canFam3.chr6 61073925 0 - 77573801 C e macFas5.chr3 33669454 3543 + 192294377 M e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=320508.000000 s hg38.chr7_KI270899v1_alt 181857 73 + 190869 ctctatgtgtctgtgtgtctgtgtgtTTCTGTGTATCTATGTGTGTATGTGAA----TGTGTATCTGTCCATGTATC s panTro5.chr7_NW_015973580v1_random 57253 73 - 83720 ctctatgtgtctgtgtgtctgtgtgtttctgtgtctctatgtgtgtatgtgaa----tgtgtatctgtccatgtatc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571764 73 + 162613886 CTCTATGTGTCTGTGTGTCAGTGTGTTTCTGTGTATCTATGTGTGCATGTGAA----TGTGTATCTGTCCATGTATC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143189 71 - 432965 ctctatgtgtctgtgtgtc--tgtgtttctgtgtatctatgtgtgtatgtgaa----tgtgtatctgtccatgtatc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053021 77 + 185818997 acgtgagtgtctgtgtgtctgtgtgtttctgtgtatctatgtgtgtatctgaatgtgtgtgtatctgtccatgtatc i rheMac8.chr3 C 0 I 2 s macNem1.NW_012019910v1 4437433 77 - 9440265 ACGTGAGTGTCTGTGTGTCTGTGTGTTTCTGTGTATCTATGTGTGTATCTGAATGTGTGTGTATCTGTCCATGTATC i macNem1.NW_012019910v1 C 0 I 2 s cerAty1.NW_012002954v1 17027462 77 - 21915920 ACGTGAGTGTCTGTGTGTCTGTGTGTTTCTGTGTATCTATGTGTGTATCTGAATGtgtgtgtatctgtccatgtatc i cerAty1.NW_012002954v1 C 0 I 2 s manLeu1.NW_012101810v1 194428 77 - 2515279 ACGTGAGTGTCTGTGTGTCTGTGTGTTTCTGTGTATCTATGTGTGTATCTGAATGTGTGTGTATCTGTCCATGTATC i manLeu1.NW_012101810v1 C 0 I 2 s colAng1.NW_012117710v1 349446 77 + 6586416 ACGTGAGTATCTGTGTGTCTGTGTGTTTCTGTGTATCTATGTGTGTGTCTGAATGTGTGTGTATCTGTCCATGTATC i colAng1.NW_012117710v1 I 2 I 2 s calJac3.chrUn_GL286444 83487 71 + 138751 ctatatgtgactatg------tgtgtgtctgtgtatctatgtgtgtatctgaatgtgtatgtAACTGTCCATGTATC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 396434 58 - 2409723 ctatgtgtgactatg------tgtgtatctg--------aatgtgtatgtaactgtccatgt-----tacatacata i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 151302 71 + 376347 ctatatgtgactgtg------tgtgtgtctgtgtatctatgtgtgtaactgaatgtgtatgtaactgtccatgtatc i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61073925 62 - 77573801 -----------tgtgtgtctgtgtgcatctgtctgtgtatatgtgtgtgtgaa----tgtgcctctctgtgtgtgtc i canFam3.chr6 C 0 C 0 e otoGar3.GL873611 2285213 0 - 8137123 C e chlSab2.chr28 156771 199 - 21531802 I e macFas5.chr3 33669454 3543 + 192294377 M e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=97746.000000 s hg38.chr7_KI270899v1_alt 181930 17 + 190869 TGTGTATATCTGTGTCT s panTro5.chr7_NW_015973580v1_random 57326 17 - 83720 tgtgtatatctgtgtct i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571837 17 + 162613886 TGTGTATATCTGTGTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143260 17 - 432965 tgtgtatatctgtgtct i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053100 17 + 185818997 tgcgtatatctgtgtct i rheMac8.chr3 I 2 C 0 s macNem1.NW_012019910v1 4437512 17 - 9440265 TGCgtatatctgtgtct i macNem1.NW_012019910v1 I 2 C 0 s cerAty1.NW_012002954v1 17027541 17 - 21915920 tgtgtatatctgtgtct i cerAty1.NW_012002954v1 I 2 C 0 s chlSab2.chr28 156970 17 - 21531802 tgtatatatctgtgtgt i chlSab2.chr28 I 199 C 0 s manLeu1.NW_012101810v1 194507 17 - 2515279 TGTGTATATCTGTGTCT i manLeu1.NW_012101810v1 I 2 C 0 s colAng1.NW_012117710v1 349525 17 + 6586416 TGTGTGTATCTGTGCCT i colAng1.NW_012117710v1 I 2 C 0 s calJac3.chrUn_GL286444 83558 17 + 138751 TATGTGCATATCTGTCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 396492 17 - 2409723 tctgtgcatatctgtcc i saiBol1.JH378296 C 0 C 0 s aotNan1.NW_018514293v1 151373 17 + 376347 tatgtgtatatctgtct i aotNan1.NW_018514293v1 C 0 C 0 s canFam3.chr6 61073987 17 - 77573801 tgtgtgtgtttgtTTTT i canFam3.chr6 C 0 I 2046 e otoGar3.GL873611 2285213 0 - 8137123 C e macFas5.chr3 33669454 3543 + 192294377 M e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=57249.000000 s hg38.chr7_KI270899v1_alt 181947 22 + 190869 GTGTGTG----TGTGT--ATGTCTGTGT s panTro5.chr7_NW_015973580v1_random 57343 12 - 83720 atgtgtg----tgtgt------------ i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571854 24 + 162613886 ATGTGTG----TGTGTGTATGTCTGTGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143277 22 - 432965 atgtgtg----tgtgt--gtatgtctgt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053117 19 + 185818997 atgtgtg----tgtgt--ctgtgtg--- i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437529 19 - 9440265 atgtgtg----tgtgt--ctgtgtg--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027558 19 - 21915920 atgtgtg----tgtgt--ctgtgtg--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 156987 19 - 21531802 gtgtctg----tgtgt--atatctg--- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194524 19 - 2515279 ATGTGTG----TGTGT--CTGTGTG--- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349542 26 + 6586416 Gtgtgtatatctgtgt--ctgtgtgtac i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83575 22 + 138751 ATGTCTG----TGTGT--ATACCCGTGT i calJac3.chrUn_GL286444 C 0 I 8 s saiBol1.JH378296 396509 22 - 2409723 atgtctg----tgcgt--atatccgtgt i saiBol1.JH378296 C 0 I 8 s aotNan1.NW_018514293v1 151390 22 + 376347 gtgtctg----tgtgt--atatccgtgt i aotNan1.NW_018514293v1 C 0 I 566 e otoGar3.GL873611 2285213 0 - 8137123 C e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=31672.000000 s hg38.chr7_KI270899v1_alt 181969 18 + 190869 CTGTGTGTATATCTGCGT s panTro5.chr7_NW_015973580v1_random 57355 12 - 83720 ------gtatatctgcgt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571878 18 + 162613886 CTGTGTGTATATCTGCGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143299 18 - 432965 ctgtgtgtatatctgcgt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053136 9 + 185818997 ---------tatatgtgt i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437548 9 - 9440265 ---------tatatgtgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027577 9 - 21915920 ---------tatatgtgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157006 7 - 21531802 -----------tgtgtgt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194543 7 - 2515279 -----------TATGTGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349568 18 + 6586416 atgtgtgtatatctgtgt i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83605 18 + 138751 CAAtgtgtatctatgtgt i calJac3.chrUn_GL286444 I 8 C 0 s saiBol1.JH378296 396539 18 - 2409723 caatgtgtatttatgtgt i saiBol1.JH378296 I 8 I 274 e otoGar3.GL873611 2285213 0 - 8137123 C e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=222091.000000 s hg38.chr7_KI270899v1_alt 181987 74 + 190869 CTGTATGTATA--------TATGCGTGT--------------------CTGTGTGTATACGTGTCTGTGTACCTG--------------------TGTCTTC--------GTATGTCTATGTGTGTATTG s panTro5.chr7_NW_015973580v1_random 57367 74 - 83720 ctgtgtgtata--------tatgtgtgt--------------------ctgtgtgtatatgtgtctgtgtacctg--------------------tgtcttt--------gtatgtctatgtgtgtattg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571896 74 + 162613886 CTGTGTGTATA--------TATGTGTGT--------------------CTGTGTGTATATGTGTCTGTGTACCTG--------------------TGTCTTT--------GTATGTCTATGTGTGTATTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143317 71 - 432965 ctgtgtgtata--------tatgtgtgt--------------------ctgtgtgtatatgtgtctgtgtacctg--------------------tgtctt---------gcatgtc--tgtgtgtattg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053145 72 + 185818997 ctgtgtgtata--------tctgtgtat--------------------atgtgtgtatatctg--tgtgtacctg--------------------tgtcttt--------gtatgtttatgtgcgtattg i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437557 72 - 9440265 ctgtgtgtata--------tctgtgtat--------------------atgtgtgtatatctg--tgtgtacctg--------------------tgtCTTT--------GTATGTTTATGTGCGTATTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027586 52 - 21915920 c------------------------------------------------tgtgtgtatatctg--tgtgtacctg--------------------tgtCTTT--------GTATGTTTATGTGCGTATTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157013 88 - 21531802 CTATGTGTATA--------TCTGTG------------------------TCTGTGTGTATATA--TGTGTATTTGTGTGCATATCCATGTGTACCTGTCTTT--------GTATGTTTATGTGCGTATTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194550 52 - 2515279 CTGTGTGTATA--------TCTG------------------------------------------TGTGTACCTG--------------------TGTCTTT--------GTATGTTTATGTGCGTATTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349586 92 + 6586416 ctgtgtgtaca--------tgtgtgtatatctgtgtgtacatgtgtacatgtgtgtatatctg--tgtgtacctg--------------------tgtCTTT--------GTATGTTTATGTGTGTATTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83623 82 + 138751 ctgtgtgcatgtg------tctgtgtgtatatttgt------------gtctgtgtatatctc--tgtgtacttg--------------------tgtctgc--------gtatatctatgtgtgtattg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 396831 96 - 2409723 ctgtgtgtatatatgtgattctgtgtgtatatgtgt------------ctgtgtgtacatatg--tatatatctg--------------------tgtctgcatgcctgtgtctatctatatgtgtattg i saiBol1.JH378296 I 274 C 0 e otoGar3.GL873611 2285213 0 - 8137123 C e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=26047.000000 s hg38.chr7_KI270899v1_alt 182061 11 + 190869 GTG--------------TGTGTCTG s panTro5.chr7_NW_015973580v1_random 57441 11 - 83720 gtg--------------tgtgtctg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 143388 7 - 432965 ------------------gtgtgtg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053217 11 + 185818997 gtg--------------tgtgtctg i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437629 11 - 9440265 GTG--------------TGTGTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027638 11 - 21915920 GTG--------------TGTGTCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157101 7 - 21531802 ------------------GTGTCTG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194602 11 - 2515279 GTG--------------TGTGTCTG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349678 9 + 6586416 GTG--------------TGTGTC-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 83705 25 + 138751 gtgtctgtgtgtatatctgtgtctg i calJac3.chrUn_GL286444 C 0 I 396 s saiBol1.JH378296 396927 11 - 2409723 gtg--------------tgtgtctg i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2285213 0 - 8137123 C e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M e panPan2.chr7 571970 0 + 162613886 C a score=466705.000000 s hg38.chr7_KI270899v1_alt 182072 146 + 190869 TGTGTGTCCATGTGTGATGACATGTGTATCTGTGTCTATG--------TGTGCATCTATGTATATCTGTGTGTATGTCTTTGTGTATCTATAGATCTGTGTCTATGTGTATATTATCTCTGTGTTCATCTGAGTATTGTATGTCCATGTGTGTC s panTro5.chr7_NW_015973580v1_random 57452 146 - 83720 tgtgtgtccatgtgtgatgacatgtgtatctgtgtctatg--------tgtgcatctatgtatatctgtgtgtatgtctttgtgtatctatagatctgtgtctatgtgtatattatctgtgtgttcatctgagtattgtatgtccatgtgtgtc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 143395 144 - 432965 tgtctgtccatgtgtgatgacatgtgtatctctgtc--tg--------tgtgcatctatgtatatctgtgtgtatgtgtttgtgtatctatagatctgtgtctatgtgtatattatctgtgtgttcatctgagtattgtatgtccatgtgtgtc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053228 135 + 185818997 tgtctgtc---atgcattgac--gtgtatctgtgtttttg--------tgtgcatctatatgtatctgcgtgtatgtctttgtgtatctatagatcggtgtctatgtgtagattatttgtgtgtccatctgcgtattgtatgtccatg------ i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4437640 141 - 9440265 TGTCTGTC---ATGCATTGAT--GTGTATCTGTGTTTTTG--------TGTGCATCTATATGTATCTGCGTGTATGTCTTTGTGTATCTATAGATCGGTGTCTATGTGTAGATTATCTGTGTGTCCATCTGCATATTGTATGTCCATGTGTGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17027649 141 - 21915920 TGTCTGTC---ATGCATTGAC--GTGTATCTGTGTTTTTG--------TGTGTATCTATATGTATCTGCGTGTATGTCTTTGTGTATCTATAGATCGGTGTCTATGTGTAGATTATCTGTGAGTCCATCTGCGTATTGTATGTCCATGTGTGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157108 138 - 21531802 TGTCTGTC---ATGCATTGAC--ATGTATCTGTGTCTATG--------TGTGCATCTGCATATATCTGCGTGTATGTCTTTGTGTGTCTATAGATCTGTGTCTGTGT---GATTATCTGTGTGTCCATCTGTGTATTGTATGTCCATGTGTGTC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194613 141 - 2515279 TGTCTGTC---ATGCATTGAC--GTGTATCTGTGTTTTTG--------TGTGTATCTATATGTATCTGCGTGTATGTCTTTGTGTATCTATAGATCGGTGTCTATGTGTAGATTATCTGTGTGTCCATCTGCGTATTGTATGTCCATGTATGTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349687 118 + 6586416 --------------------------TATCTGTGTCTATG--------TGTGCATCTATATATATCTGTGTGTATGTCTTTGTGTATCTACAGATC--TGTCTATGTGTAGATTACCTGTGTGTCCATCTGCGTATCGTAtgtccatgtgtgtc i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 84126 133 + 138751 tgtgtgtccatgtgtattg----atctatctgtgtctatgtgtgtgtctgtgCATCTATTTATATCTGCG----------tgtgtgtctatagatc--tgtgtctgtgta---tatttgtgtctccatgtgtatagtgtatgtccatg--tgtc i calJac3.chrUn_GL286444 I 396 C 0 s saiBol1.JH378296 396938 129 - 2409723 tgtgtgtccatgtgtattg----atctatctgtgtctatg--------tatgcatctatttatatctgtg----tgtctttgtgtgtctataga----tgtctatgtgta---tatttgtgtgtccatgtgtgtattgtatgtCCATG--TGTC i saiBol1.JH378296 C 0 C 0 e otoGar3.GL873611 2285213 0 - 8137123 C e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M e panPan2.chr7 571970 0 + 162613886 C a score=5681.000000 s hg38.chr7_KI270899v1_alt 182218 3 + 190869 TAC s panTro5.chr7_NW_015973580v1_random 57598 3 - 83720 tac i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 143539 3 - 432965 tac i gorGor5.CYUI01015914v1 C 0 C 0 s macNem1.NW_012019910v1 4437781 3 - 9440265 TAC i macNem1.NW_012019910v1 C 0 I 2 s cerAty1.NW_012002954v1 17027790 3 - 21915920 TAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157246 3 - 21531802 TAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194754 3 - 2515279 TAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349805 1 + 6586416 t-- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 84259 3 + 138751 aac i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 397067 3 - 2409723 tac i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2285213 3 - 8137123 tat i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e rheMac8.chr3 34053363 0 + 185818997 C e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M e panPan2.chr7 571970 0 + 162613886 C a score=10385.000000 s hg38.chr7_KI270899v1_alt 182221 42 + 190869 ATGTGCCTGTGTCTGTATCTG--TGTCTGTCTATGTGTCTATGT s panTro5.chr7_NW_015973580v1_random 57601 42 - 83720 atgtgcctgtgtctgtatctg--tgtctgtccatgtgtctatgt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 143542 42 - 432965 atgtgcctgtgtctgtatctg--tgtctgtccatgtgtctatgt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053363 11 + 185818997 -------------tgtatctg--tgt------------------ i rheMac8.chr3 C 0 I 4 s cerAty1.NW_012002954v1 17027793 4 - 21915920 --------------------A--CGT------------------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157249 28 - 21531802 --------------GTGTCTG--TGTCTGTCCATGTGTGTCTAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194757 2 - 2515279 ------------------------------------------AC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 349806 32 + 6586416 ----------atgtgtgtgtc--tgtctgtccatgtgtgtctat i colAng1.NW_012117710v1 C 0 I 2 s calJac3.chrUn_GL286444 84262 42 + 138751 atgtg--tgtctatatatctgtctgtatgtatatctgtgtctat i calJac3.chrUn_GL286444 C 0 I 2 s saiBol1.JH378296 397070 42 - 2409723 atgtatctgtctatatatctg--tgtatgtatatgtctgtctat i saiBol1.JH378296 C 0 I 2 s otoGar3.GL873611 2285216 42 - 8137123 atgtgtctgtgtctgcatccg--tgtgtaccactgtgtccatgt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macNem1.NW_012019910v1 4437784 2 - 9440265 I e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M e panPan2.chr7 571970 0 + 162613886 C a score=285914.000000 s hg38.chr7_KI270899v1_alt 182263 118 + 190869 GTGTATCT----GTGTGTCC----GTGTG---------------TGTGTGTCCA------------TATATC--------TGTCTATGCATGTATCATCTGTGTGTCT--GT------------------------------------GTAT--------------------------------------------------------TGTGTATCCATGCATATATCCGTAACTATGGGTA-------------------TGTCTGTGTGTGT s panTro5.chr7_NW_015973580v1_random 57643 126 - 83720 gtgtatct----gtgtgtcc----gtgtg---------------tgtgtgtcca------------tatat----------gtctatgcatgtatcatctgtgtgtct--gt------------------------------------gtat--------------------------------------------------------tgtgtatccatgcatatatccataactatgggtaagtc---------tgtgtgtgtctgtgtgtgt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 143584 128 - 432965 gtgtatct----gtgtgtcc----gtgtg---------------tgtgtgtcca------------tgtatc--------tgtctatgcatgtatcatctgtgtgtct--gt------------------------------------gtat--------------------------------------------------------tgtgtatccatgcatatatccgtaactatgggtatgtc---------tgtgtgtctctgtgtgtgt i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053378 122 + 185818997 gtgtatct----gtgtgtcc----gtgtg---------------tgtgtgtcca------------tgtatctg------tgtctatgcaggtatcatctgtgtgtctatgt------------------------------------gtat--------------------------------------------------------tgtgtgtccatgcatatatctgtatctatgtgta-------------------tgtctatgtgtgt i rheMac8.chr3 I 4 I 478 s macNem1.NW_012019910v1 4437786 122 - 9440265 GTGTATCT----GTGTGTCC----GTGTG---------------TGTGTGTCCA------------TGTATCTG------TGTCTATGCAGGTATCATCTGTGTGTCTATGT------------------------------------GTAT--------------------------------------------------------TGTGTGTCCATGCATATATCTGTATCTATGTGTA-------------------TGTCTATGTGTGT i macNem1.NW_012019910v1 I 2 I 27 s cerAty1.NW_012002954v1 17027797 124 - 21915920 --GTATCT----GTGTGTCCGTGTGTGTG---------------TGTGTGTCCA------------TGTATCTG------TGTCTATGCAGGTATCATCTGTGTGTCTATGT------------------------------------GTAT--------------------------------------------------------TGTGTGTCCATGCATATATCTGTATCTATGTGTA-------------------TGTCTATGTGTGT i cerAty1.NW_012002954v1 C 0 I 613 s chlSab2.chr28 157277 116 - 21531802 GCGTGTAT----GTGTGTCC--------G---------------TGTGTGTCCA------------TGTATCTA------TGTCTATGCATGTATCA--TGTGTGTCTATGT------------------------------------GTAT--------------------------------------------------------TGTGTGTCCATGCATATATCTGTAtctatgtgta-------------------tgtctatgtgtgt i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 194759 122 - 2515279 GTGTATCT----GTGTGTCC----GTGTG---------------TGTGTGTCCA------------TGTATCTG------TGTCTATGCAGGTATCATCTGTGTGTCTATGT------------------------------------GTAT--------------------------------------------------------TGTGTGTCCATGCATATATCTGTATCTATGTGTA-------------------TGTCTATGTGTGT i manLeu1.NW_012101810v1 C 0 I 637 s colAng1.NW_012117710v1 349840 105 + 6586416 gtgtatct----gtgtgtct----atgtgtAT------------TGTGTGTCCA------------TGCATATA------TCTGTATGTATG-------CGTGTGTCTG---------------------------------------------------------------------------------------------------TGTGTGTCCATGC--GTTTCTGTATCTATG-----------------------TATCTGTGTGTGT i colAng1.NW_012117710v1 I 2 C 0 s calJac3.chrUn_GL286444 84306 270 + 138751 gtatgtccatatgtctttcc----atgtttcatgtgtatatctgtgtgtgtccatgttcatgcatgtgtgtctatatatctgtctatgcatgtgtcatctgtgtgtctgtatgtctgtgtgagtatctgcatgtgtctatgtatctatgtatcatctgtgtccacgtgtgtccacatgtgagcatctgtgtatgtttctgtatcaatgtgtgtatctatgtgtgtatctgtgtctatgtgcatatcatctgtgtgtgggtgtgtccacatgtgt i calJac3.chrUn_GL286444 I 2 C 0 s saiBol1.JH378296 397114 179 - 2409723 gtCTGTCC--ATGTCTGTCC----ATGTGTCA------------TGTGTGTCCATGTTCATGCATGTGTATCTA------TGTCTAAGCA--TGTCATCTGTGTCTATGTAT------------------CCGTGTCTATATATCTATGTATCATCTGTGTCCA--------------------------------------------tgtgtgtccacgtgtatgtgtatgtttctgtatgtatca-------atgtgtgtatctgtgtgtgt i saiBol1.JH378296 I 2 C 0 s otoGar3.GL873611 2285258 77 - 8137123 ------------gtgtgtct----gtgtg---------------tgt-------------------agcat---------tgtctctacaggtct---------------gt------------------------------------g-----------------------------------------------------------tgtgtaacca--------tctgtgtatgtaggtg--------------------atgtatgtgtgt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M e panPan2.chr7 571970 0 + 162613886 C a score=491.000000 s hg38.chr7_KI270899v1_alt 182381 12 + 190869 TT----GTGTCCACGT s panTro5.chr7_NW_015973580v1_random 57769 16 - 83720 ttcttcgtgtccacat i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 143712 16 - 432965 ttctttgtgtccacat i gorGor5.CYUI01015914v1 C 0 C 0 s chlSab2.chr28 157393 8 - 21531802 --------gtccatgt i chlSab2.chr28 C 0 I 12 s calJac3.chrUn_GL286444 84576 9 + 138751 ----ctgtgtgT---T i calJac3.chrUn_GL286444 C 0 I 6 s saiBol1.JH378296 397293 12 - 2409723 ----ctatgtgcatat i saiBol1.JH378296 C 0 I 6 s otoGar3.GL873611 2285335 12 - 8137123 ----ctgtaactatct i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 349945 0 + 6586416 C e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e cerAty1.NW_012002954v1 17027921 613 - 21915920 I e macNem1.NW_012019910v1 4437908 27 - 9440265 I e macFas5.chr3 33669454 3543 + 192294377 M e rheMac8.chr3 34053500 478 + 185818997 I e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M e panPan2.chr7 571970 0 + 162613886 C a score=12679.000000 s hg38.chr7_KI270899v1_alt 182393 13 + 190869 GTGTGTATCTGTG s panTro5.chr7_NW_015973580v1_random 57785 13 - 83720 gtgtgtatctgtg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 571970 13 + 162613886 GTGTGTATCTGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143728 13 - 432965 gtgtgtatctgtg i gorGor5.CYUI01015914v1 C 0 C 0 s chlSab2.chr28 157413 13 - 21531802 ctacgtatctgtg i chlSab2.chr28 I 12 C 0 s colAng1.NW_012117710v1 349945 13 + 6586416 CTCCATATCTGTG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 84591 11 + 138751 ttatgtgtgta-- i calJac3.chrUn_GL286444 I 6 C 0 s saiBol1.JH378296 397311 11 - 2409723 tggtgtgtcca-- i saiBol1.JH378296 I 6 C 0 s otoGar3.GL873611 2285347 13 - 8137123 gtgcatgtCTATT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e cerAty1.NW_012002954v1 17027921 613 - 21915920 I e macNem1.NW_012019910v1 4437908 27 - 9440265 I e macFas5.chr3 33669454 3543 + 192294377 M e rheMac8.chr3 34053500 478 + 185818997 I e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=61877.000000 s hg38.chr7_KI270899v1_alt 182406 29 + 190869 TGTGTCTA----TAT---ATCTGTGTCT------ATGTGTGT s panTro5.chr7_NW_015973580v1_random 57798 29 - 83720 tgtgtcta----tat---atctgtgtct------gagtgtat i panTro5.chr7_NW_015973580v1_random C 0 I 1 s panPan2.chr7 571983 29 + 162613886 TGTGTCTA----TAT---ATCTGTGTCT------GAGTGTAT i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01015914v1 143741 29 - 432965 tgtgtcta----tat---atctgtgtct------atgtgtgt i gorGor5.CYUI01015914v1 C 0 C 0 s macNem1.NW_012019910v1 4437935 29 - 9440265 TGTGTCTA----CGT---ATCTGTGTCT------ATGTGTGT i macNem1.NW_012019910v1 I 27 I 228 s chlSab2.chr28 157426 29 - 21531802 tgtgtcta----cat---atctgtgtct------atgtgtgt i chlSab2.chr28 C 0 I 3 s colAng1.NW_012117710v1 349958 28 + 6586416 ----TCTA----TGTATCATCTGTGTCC------ACATATGT i colAng1.NW_012117710v1 C 0 I 2 s calJac3.chrUn_GL286444 84602 28 + 138751 tgtgtcta----tat---atctatgtat-------tatgtgt i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 397322 39 - 2409723 cgtgtctgtttctgt---atctatgtgtgtgtctatatatgt i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2285360 27 - 8137123 tgtgtctg----tct---g--tgtgtct------gtgtgttt i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e cerAty1.NW_012002954v1 17027921 613 - 21915920 I e macFas5.chr3 33669454 3543 + 192294377 M e rheMac8.chr3 34053500 478 + 185818997 I e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=44596.000000 s hg38.chr7_KI270899v1_alt 182435 30 + 190869 GTC-----TGTGTCCACGTGTGTGTATCTGTGTGT s panTro5.chr7_NW_015973580v1_random 57828 30 - 83720 atc-----tgtgtccacgtgtgtgtatctgcgtgt i panTro5.chr7_NW_015973580v1_random I 1 C 0 s panPan2.chr7 572013 30 + 162613886 ATC-----TGTGTCCACGTGTGTGTATCTGTGTGT i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01015914v1 143770 27 - 432965 atc-----tgtgtccacgtgt---tatctgtgtgt i gorGor5.CYUI01015914v1 C 0 C 0 s chlSab2.chr28 157458 28 - 21531802 atg-----tgtctacatgtgt--atatctgtgtgt i chlSab2.chr28 I 3 C 0 s colAng1.NW_012117710v1 349988 28 + 6586416 ATC-----TGTGTCTATGTGT--GCATCTGTGTGT i colAng1.NW_012117710v1 I 2 I 17 s calJac3.chrUn_GL286444 84630 32 + 138751 gtc---catgtgtccatgtgtgtgtttctgcatgt i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 397361 31 - 2409723 gtctatcatgtgtcca----cgtgtttctgcatgt i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2285387 30 - 8137123 aac-----tgtctgtgtgtctgtgtatctgtgtgc i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e cerAty1.NW_012002954v1 17027921 613 - 21915920 I e macNem1.NW_012019910v1 4437964 228 - 9440265 I e macFas5.chr3 33669454 3543 + 192294377 M e rheMac8.chr3 34053500 478 + 185818997 I e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=2476.000000 s hg38.chr7_KI270899v1_alt 182465 2 + 190869 GT s panTro5.chr7_NW_015973580v1_random 57858 2 - 83720 gt i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572043 2 + 162613886 GT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143797 2 - 432965 gt i gorGor5.CYUI01015914v1 C 0 C 0 s chlSab2.chr28 157486 2 - 21531802 gt i chlSab2.chr28 C 0 I 46 s calJac3.chrUn_GL286444 84662 2 + 138751 at i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 397392 2 - 2409723 at i saiBol1.JH378296 C 0 C 0 s otoGar3.GL873611 2285417 2 - 8137123 ct i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 350016 17 + 6586416 I e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e cerAty1.NW_012002954v1 17027921 613 - 21915920 I e macNem1.NW_012019910v1 4437964 228 - 9440265 I e macFas5.chr3 33669454 3543 + 192294377 M e rheMac8.chr3 34053500 478 + 185818997 I e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=11914.000000 s hg38.chr7_KI270899v1_alt 182467 15 + 190869 CTATA----TATCCGTGtc-- s panTro5.chr7_NW_015973580v1_random 57860 15 - 83720 ctata----tatctgtgtc-- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572045 15 + 162613886 CTATA----TATCTGTATC-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143799 15 - 432965 ctata----tatctgtgtc-- i gorGor5.CYUI01015914v1 C 0 C 0 s calJac3.chrUn_GL286444 84664 19 + 138751 ctatgtatctgtgtgtatc-- i calJac3.chrUn_GL286444 C 0 I 6 s saiBol1.JH378296 397394 14 - 2409723 ctgt-----tatctgtatc-- i saiBol1.JH378296 C 0 I 6 s otoGar3.GL873611 2285419 15 - 8137123 --gta----tatctgtgtgtt i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 350016 17 + 6586416 I e canFam3.chr6 61074004 2046 - 77573801 I e chlSab2.chr28 157488 46 - 21531802 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e cerAty1.NW_012002954v1 17027921 613 - 21915920 I e macNem1.NW_012019910v1 4437964 228 - 9440265 I e macFas5.chr3 33669454 3543 + 192294377 M e rheMac8.chr3 34053500 478 + 185818997 I e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=4095.000000 s hg38.chr7_KI270899v1_alt 182482 1 + 190869 t s panTro5.chr7_NW_015973580v1_random 57875 1 - 83720 t i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 143814 1 - 432965 t i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053978 1 + 185818997 t i rheMac8.chr3 I 478 C 0 s macNem1.NW_012019910v1 4438192 1 - 9440265 t i macNem1.NW_012019910v1 I 228 C 0 s cerAty1.NW_012002954v1 17028534 1 - 21915920 t i cerAty1.NW_012002954v1 I 613 C 0 s colAng1.NW_012117710v1 350033 1 + 6586416 T i colAng1.NW_012117710v1 I 17 C 0 s calJac3.chrUn_GL286444 84689 1 + 138751 t i calJac3.chrUn_GL286444 I 6 C 0 s saiBol1.JH378296 397414 1 - 2409723 t i saiBol1.JH378296 I 6 C 0 s otoGar3.GL873611 2285434 1 - 8137123 t i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e chlSab2.chr28 157488 46 - 21531802 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M e panPan2.chr7 572060 0 + 162613886 C a score=55635.000000 s hg38.chr7_KI270899v1_alt 182483 21 + 190869 gtgtgtatc---tgtgtgtatcta s panTro5.chr7_NW_015973580v1_random 57876 24 - 83720 gtgtgtatcatctgtgtgtatcta i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572060 12 + 162613886 ------------TGTGTGTATCTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143815 24 - 432965 gtgtgtatcatctgtgtgtatcta i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34053979 21 + 185818997 gtgtgtttc---tgtatgtatcta i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4438193 21 - 9440265 gtgtgtttc---tgtatgtatcta i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17028535 21 - 21915920 gtgtgtttc---tgtgtgtatcta i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157534 21 - 21531802 gtgtatctg---tgtgtgtatctg i chlSab2.chr28 I 46 C 0 s colAng1.NW_012117710v1 350034 21 + 6586416 GTGTGTTTC---TGTGCGTAGCTA i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 84690 21 + 138751 CTGTGTCCA---TGTGCACATCAT i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 397415 21 - 2409723 ctgtgtcca---tgtgcacatcat i saiBol1.JH378296 C 0 I 1 s otoGar3.GL873611 2285435 21 - 8137123 gtgtgtAGC---ACTTTGTGTCTG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151412 566 + 376347 I e cebCap1.NW_016107703v1 557602 1580 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=7098.000000 s hg38.chr7_KI270899v1_alt 182504 1 + 190869 t s panTro5.chr7_NW_015973580v1_random 57900 1 - 83720 t i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572072 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143839 1 - 432965 t i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34054000 1 + 185818997 t i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4438214 1 - 9440265 t i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17028556 1 - 21915920 t i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157555 1 - 21531802 t i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 350055 1 + 6586416 T i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 84712 1 + 138751 T i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 397437 1 - 2409723 t i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 559182 1 - 2125214 t i cebCap1.NW_016107703v1 I 1580 C 0 s otoGar3.GL873611 2285456 1 - 8137123 T i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e macFas5.chr3 33669454 3543 + 192294377 M e aotNan1.NW_018514293v1 151412 566 + 376347 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=119609.000000 s hg38.chr7_KI270899v1_alt 182505 21 + 190869 gtgtgcatc--tgtgtgtgtctg- s panTro5.chr7_NW_015973580v1_random 57901 21 - 83720 gtgtgcatc--tgtgtgtgtctg- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572073 21 + 162613886 GTGTGCATC--TGTGTGTGTCTG- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143840 21 - 432965 gtgtgcatc--tgtgtgtgtctg- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34054001 21 + 185818997 gtgtgtatc--agtgtgtgtctg- i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4438215 21 - 9440265 gtgtgtatc--agtgtgtgtctg- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17028557 21 - 21915920 gtgtgtatc--agtgtgtgtctg- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157556 21 - 21531802 gtgtgtcta--tgtgtgtgtctG- i chlSab2.chr28 C 0 C 0 s colAng1.NW_012117710v1 350056 23 + 6586416 ATGTGTATCTAAGTGTGTGTCTG- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 84713 18 + 138751 GTGTGTATC--TGCATGTGT---- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 397438 21 - 2409723 gtgtgtatc--tgtgtgtgtctg- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 559183 21 - 2125214 gtgtgtatc--tgcgtgtgtctg- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 151978 21 + 376347 gtgtgtatc--tgcgtgtgtctg- i aotNan1.NW_018514293v1 I 566 C 0 s otoGar3.GL873611 2285457 22 - 8137123 TTGTGTCTA--TGTGTATAACCGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 194881 637 - 2515279 I e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=3316115.000000 s hg38.chr7_KI270899v1_alt 182526 479 + 190869 tTTTCTCTTTGTTTTTATGGTGTCCACGGATGGGCCGACTGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCGGAAGGGTCTGGCGGAGGGTTGGCCGCTGTCTCCTCACTCCTCAGCGGGGTCCTGTCTTCCGACTTTTGTCTCGCGCCGCCGCAGCCTGTGGACTCC-------------------------TGGGCCCTCCTCTGAGAGCCTGCGCTGTGCCTGGCCCCGGGCGGAACTTTGAACGAGGCTCCTGTCTTAACTCGACTGCTTGTGCTTGGGGGAGATAAACAATAAACAGGAGCAGAAGAAAGTGTCCT---------------------------------CAGACCAC-------------GGCGGGTG----------------CTGTTGGGAAAACAGTGGC--GGGGCAGGGAGGGGGGCGCTTCTGA----AGGACCTGGCGAGGTAGAGGCC-----------------------------ACTGTTCTAAGAGG-CAA-----------------CAGACGAGATGAACCAGGACCCTCTGC-------GAGGGAGGGAGGCGTC------CAGGGGTGCACACGGG--------------TCCAGATAGC----------TGC------ s panTro5.chr7_NW_015973580v1_random 57922 479 - 83720 tTTTCTCTTTGTTTTCATGGTGTCCACGGATGGGCCGACTGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCGGAAGGGTCTGGCGGAGGGGTGGCCGCTGTCTCCTCACTCCTCAGCGGGGTCCTGTCTTCCGACTTTGGTCTCGCGCCGCCACAGCCTGTGGACTCC-------------------------TGGGCCCTCCTCTGAGAGCCTGGGCTGTGCCTGGCCCCGGGCGGAACCTTGAACGAGGCTCCTGTCTTAACTCGACTGCTTGTGCTTTGGGGAGATAAACAATAAACAGGAGCAGAAGAAAGTGTCTT---------------------------------CAGACCAT-------------GGCGGGTG----------------CTGATGGGAAAACAGTGGC--GGGGCAGGGACGGGGGCGCTTCTGA----AGGACCTGGTGAGGTAGAGGCC-----------------------------ACTGTTCTAAGAGG-CAA-----------------CAGACGAGATGAACCAGGACCCTCTGC-------GAGGGAGGGAGGCGTC------CAGGGGTGCACACGGG--------------TCCAGATAGC----------TGC------ i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572094 479 + 162613886 TTTTCTCTTTGTTTTCATGGTGTCCACGGATGGGCCGACTGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCGGAAGGGTCTGGCGGAGGGCTGGCCACTGTCTCCTCACTCCTCAGCGGGGTCCTGTCTTCCGACTTTTGTCTCGCGCCGCCGCAGCCTGTGGACTCC-------------------------TGGTCCCTCCTCTGAGAGCCTGCACTGTGCCTGGCCCCGGGCGGAACGTTGAACGAGGCTCCTGTCTTAACTCGACTGCTTGTGCTTTGGGGAGATAAACAATAAACAGGAGCAGAAGAAAGTGTCTT---------------------------------CAGACCAC-------------AGCGGGTG----------------CTGTTGGGAAAACAGTGGC--GGGGCAGGGACGGGGGCGCTTCTGA----AGGACCTGGCGAGGTAGAGGCC-----------------------------ACTGTTCTAAGAGG-CAA-----------------CAGACGAGATGAACCAGGACCCTCTGC-------GAGGGAGGGAGGCGTC------CAGGGGTGCACACGGG--------------TCCAGATAGC----------TGC------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 143861 478 - 432965 -tTTCTCTTTGTTTTCATGGTGTCCACGGATGGGCCGACTGAACC--ACCAAATTCCTCCTCAGAGTCCAGT--AAAGGCACCAGGCGGAAGGGTCTGGCGGAGGGCTGGCCGCTGTCTCCTCACTCCTCAGCGGGGTCCTGTCTTCCGACTTTTGTCTCGCGCCGCCGCAGCCTGTGGACTCC-------------------------TGGTCCCTCCTCTGAGAGCCTGCGCTGTGCCTGGCCCCGGGCGGAACTTTGAACGAGGCTCCTGTCTTAACTCGACTGCTTGTGCTTCGGGGAGATAAACAATAAACAGGAGCAGAAGAAAGTGTCTT---------------------------------CAGACCAC-------------GGCGGGTG----------------CTGCTGGGAAAACAGTGGC--GGGGCAGGGAGGGGGGCGCTTCTGA----AGGACCTGGCGAGGTAGAGGCC-----------------------------ACTGTTCTAAGAGG-CAA-----------------CAGACGAGATGAACCAGGACCCTCTGC-------GAGGGAGGGAGGTGTC------CAGGGGTGCACATGGC--------------TCCTGATAGC----------TGC------ i gorGor5.CYUI01015914v1 C 0 I 125 s rheMac8.chr3 34054022 502 + 185818997 tTTTCTCTTTGTTTTCACAGTGTCCACAGACGGGCAGACTGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCAGAAGGGTCCGGCCGAGGGCTGGCCGCTGTCTCCTCACTCCTCAGTGGGGTCCTGTCTTCTGACTTTTGTCACGTGCTGCCGCAGCCTGTGGACGCCTGGTCCCCACGTGGAGACGGGCTTGTGGTCCCTCCTCTGAGAGCCTGCTTTGTGCCCGGCCCCGGGCCGAACTTTGAACGaggctcctgtctt-actcgagtgcttatgttttggggagataaacaataaacaggaacagaagaaagtgtctt---------------------------------cagaccac-------------ggcgggtg----------------ctgttgggaaaacagtggt--ggggcaggga--ggGGTGCTTCTGA----AGGATCTGGCGAGGTCAAGGTC-----------------------------ACTGTTCTGAGGGGGCGA-----------------CAGACGAGCTGAACTAGGATCCTGTGC-------AAGGGAGGGAGGCGTC------CAGTGGTGCACACGGG--------------TCCAGATAAC----------AGC------ i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4438236 502 - 9440265 tTTTCTCTTTGTTTTCACAGTGTCCACAGACGGGCAGACTGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCAGAAGGGTCCGGCTGAGGGCTGGCCGCTGTCTCCTCACTCCTCAGTGGGGTCCTGTCTTCTGACTTTTGTCACGTGCTGCCGCAGCCTGTGGACGCCTGGTCCCCACGTGGAGACAGGCTTGTGGTCCCTCCTCTGAGAGCCTGCTTTGTGCCCGGCCCCGGGCCGAACTTTGAACGaggctcctgtctt-actcgagtgcttatgttttggggagataaacaataaacaggaacagaagaaagtgtctt---------------------------------cagaccac-------------ggcgggtg----------------ctgttgggaaaacagtggt--ggggcaggga--ggGGTGCTTCTGA----AGGATCTGGCGAGGTCAAGGTC-----------------------------ACTGTTCTGAGGGGGCGA-----------------CAGACGAGCTGAACTAGGATCCTGTGC-------AAGGGAGGGAGGCGTC------CAGTGGTGCACACGGG--------------TCCAGATAAC----------AGC------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17028578 502 - 21915920 tTTTCTCTTTGTTTTCACAGTGTCCACAGACGGGCAGACTGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCAGAAGGGTCCGGCCGAGGGCTGGCCGCTGTCTCCTCACTCCTCAGTGGGATCCTGTCTTCTGACTTTTGTCACGTGCTGCCACAGCCTGTGGACGCCTGGTCCCCACGTGGAGACGGGCTTGTGGTCCCTCCTCTGAGAGCCTGCTTTGTGCCCGGCCCCGGGCCGAACTTTGAACaaggctcctgtctt-actcgagtgcttatgttttggggagataaacaataaacaggaacagaagaaagtgtctt---------------------------------cagaccac-------------ggcgggtg----------------ctgttgggaaaacagtggt--ggggcaggga--ggGGCGCTTCTGA----AGGATCTGGCGAGGTCAAGGTC-----------------------------ACTGTTCTGAGGGGACGA-----------------CAGACCAGCTGAACTAGGATCCTGTGC-------AAGGGAGGGAGGCATC------CAGTGGTGCACACGGG--------------TCCAGATAAC----------AGC------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 157577 497 - 21531802 --TTTTCTCTGTTTTCACGGTGTACACAGGCGGGCAGACTGAACC--ACCAAATTCCTCCTC--AGCCCAGT--AAAGGCATTAGGCAGAAGGGTCCGGCCGAGGGCTGGCCGCTGTCTCCTCACTCCTCAGTGGGGTCCTGTCTTCTGACTTTTGTCACGTGCTGCCGCAGCCTGTGGACGCCTGGTCCCCACGTGCAGAGGGGCTTGTGGTCCCTCCTCTGAGAGCCTGCTTTGTGCCCGGCCCCGGGCCGAACTTTGAACGaggttcctgtctt-actcgagtgcttatgttttgaggagataaacaataaacaggaacagaagaaagtgtctt---------------------------------cagaccac-------------ggcgggtg----------------ctgttgggaaaacagtggt--ggggcaggga--ggGGCGCTTCTGA----AGGATCTGGCGAGGTCGAGGTC-----------------------------ACTGTTCTGAGGGGGCGA-----------------CAGACGAGATGAACCAGGACGCTGTGC--------GGGGAGGGAGGCGTC------CGGTGGTGCACACGGG--------------TCCAGACAAC----------AGC------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 195518 502 - 2515279 TTTTCTCTTTGTTTTCACAGTGTCCACAGACGGGCAGACTGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGACACCGGGCAGAAGGGTCCGGCCGAGGGCTGGCCGCTGTCTCCTCACTACTCAGTGGGGTCCTGTCTTCTGACTTTTGTCACGTGCTGCCGCAGCCTGTGGACACCTGGTCCCCATGTGGAGACGGGCTTGTGGTCCCTCCTCTGAGAGCCTGCTTTGTGCCCGGCCCCGGGCCGAACTTTGAACGAGGCTCGTGTCTT-ACTCGAGTgcttatgttttggggagataaacaataaacaggaacagaagaaagtgtctt---------------------------------cagaccac-------------ggcgggtg----------------ctgttgggaaaacagtggt--ggggcaggga--ggGGCGCTTCTGA----AGGATCTGGCAAGGTCAAGGTC-----------------------------ACTGTTCTGAGGGGGCGA-----------------CAGACGAGCTGAACTAGGATCCTGTGC-------AAGGGAGGGAGATGTC------CAGTGGTGCACACAGG--------------TCCAGATAAC----------AGC------ i manLeu1.NW_012101810v1 I 637 C 0 s colAng1.NW_012117710v1 350079 501 + 6586416 TTTTCTCTTTGTTTTCACGGTGTCCACAGACGGACGGACTAAACC--ACCAAATTCCTTCTCAGAGCCCAGT--AAAGGCACCAGGCAGAAGGGTCCGGCCGAGGGCTGGCCGCTGTCTCCTCACTCCTCTGTGGGGTCCTGTCTTCTGACTTTTGTCATGTGCTGCCGCAGCCTGTGCACGCCTGGTCCCCACGTGGAGAGGGGCTTGTGGTCCCTCCTCTGAGTGCCTGCTTTGTGCCCGGCCCCGGGCCGAACTTTGAACGaggctcctg-ctt-actcgagtgcttatgttttgcggagataaacaataaacaggaacagaagaaagtgtctt---------------------------------cagaccac-------------ggcgggtg----------------ctgttgggaaaacagtggt--ggggcaggga--ggGGCTCTTCTGA----AGGATCTGGCGAGGTCGAGGCC-----------------------------ACTGTTCTAAGGGGGCGA-----------------CAGACGAGATGAACCAGGACCCTGTGC-------GAGGGAGGGAGGCGTC------CAGTGGTGCACACGGG--------------TCCAGATAAC----------AGC------ i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 84731 497 + 138751 TTTTCTCTTTGTTTTTGTGGTGTCCATGAGTGGGCTGATGGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCAGAAGGGTCTGGCCGA-GGCTGGCCACTCTCTTCTCACTCCTGAGTGGGGCCCTGTCTTCTGACTTTTGTCACACACTGCCGCAGCCTGTGGACGCCTGGTCCCCACTTGGAGTAGGGCTTCTGGTCCCCCCTCtgagagcctactctgtgcccggccctgggcagatctgcaagcaatgctcctgtctt-actggagtgcttgtgttttggggagataaacaataaacaggagcagaagaaagtgtctt---------------------------------cagaccac-------------agcgggtg----------------ctgttaggaagacagaggc--acagcagaga--ggggtGCTTCCAG----ATGATCTGGAGAGGTAGAGGCC-----------------------------ACTGTTCCAAGTAGGTGA-----------------CAGAGGAGATGAAGCAGGAGCCTGTGT-----------GAGGGAGCTGTC------CAAGAGTGCACAAGGG--------------TCCAGAGAGC----------AGC------ i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 397459 496 - 2409723 tTTCCTCATTGTTTTTGTGGTGTCCATGAGTGGGCTGATGGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCAGAAGGGGCTGGCCGA-GGCTGGCCACTCTCTCCTCACTCCTGAGTGGGGCCCTGTCTTCTGACTTTTGTCACACACCGCCGCAGCCTGTGGACGCCTGGTCCCCACTTGGACTAGGGCTTGTGATCCCtccactgagagcctgctctgtgccc-accccaggtggaactgtgaacaaggctcctgtctt-actggagtgtttgtattttggggagataaacaataaacagaagcagaagcaagtgtctt---------------------------------cagaccat-------------agcgggtg----------------ctgttaggaagacataggc--acagcagaga--ggggtGCTTCCTG----ATGATCTGGAGAGGTAGAGGCC-----------------------------ACTGTTCTAAGGGGGCGA-----------------CAGAGGAGATGAAGCAGGAGCCAGTGC-----------GAGGGAACTGTC------CAGGGGGGCACAGGGG--------------TCCAGAGAGC----------AGC------ i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 559204 491 - 2125214 ttttctc------tctgtggtgtCCATGAGCGGGCTGATGGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCAGAAGGGTCTGGCAGA-GGCTGGCCACTCTCTCCTCACTCCTGATTGGGGCCCTGTCTTCTGACTTTTGTCACGCACCATTGCAGCCTGTGGACGCCTGGTCCCCACTTGGAGTAGGGCTTGTGGTCCCTCCTCtgagagcctgctctgtgcccggccccaggtggaactgtgaacaagcctcctgtctt-actggagtgtttgtattttgggaagataaacaattaacaggagcagaagaaagtgtctt---------------------------------cagaccac-------------agcgggtg----------------ctgttaggaagacagaggc--acagcagaga--ggggtGCTTCCAG----ATGATCTGGGGAGGTAGAGGCC-----------------------------ACTGTTGTAAGGGGGCGA-----------------CAGAGGAGATGAAGCAGGAGCCTGTGC-----------AAGGGAGCCGTC------CAGGGGTGCACAGGGG--------------TCCAGAGAGC----------AGC------ i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 151999 490 + 376347 ttttctctgtgtttttgtggtgtccgtgagtgGGCTGATGGAACC--ACCAAATTCCTCCTCAGAGCCCAGT--AAAGGCACCAGGCAGAAGGGTCTGGCCGA-GGCTGGCCACTCTCTCCTCGCTCCTGAGTGGGGCCCTGTCTTCTGACTTCCGTCACGCACCGCCGCAGCCCGTGGACGCCCGGTCCCCACTTGGAGTAGGGCTTGTGGTCCCTCCTCtgagagcctgctctgtgcccggccccgggcggaactgtgaacaaggcccctgtctt-actggagtgtttgtattttggggagataaacaataaacaggagcagaagaaagtgtctt---------------------------------cagaccac-------------agcgggtg----------------ctgttaggaagacagaggc--acagcagaga--ggGCTGCTTCAGG----ACGATCTGGG------GAGGCC-----------------------------GCTGTTCTAA-CGGGCGC-----------------CGGAGGAGATGAAGCAGGAGCCCGTGC-----------GAGGGAGCTGTC------CAGGGCTGCACAGGGG--------------TCCAGAGAGC----------AGC------ i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2285479 632 - 8137123 CTGTCTGTTTGTGATTTTCAAATCAAATTATG----AATTGAACCAAATCAAATTACTCCTCACAGTGATGTACAAAGGAGCCAAGAAGAA-GATCCGGCCACAGA----------------CACAGCTTAATTTCACTCTACCTTCAGTCTGGTGTCACATCTTCCTTTAGCCTGT-TACCCCTGGTCCCAAGGTGGGTTGTGGCATGTGGTCCCTTCTTTGAGTGCCTGTTCTGTGCCCATCCACAGGCATTATTG-----GAGGCTCCTGTCTC-ACTGAAGTGCTTGCAGTTTGGGAA---AGATAATAAACAGGAATAGAAGGAAGTGTCTTggctcggtgtctgtggctcaagcggctaaggcgccagccacatacacctaaggtggcgggttcgaatccagtctgggcccgccaaaaaaaaaatagccaggtgttgtgg--cgggcgcctgtggtcccagctacttgggaggctgagacaggagactcgcttgagcccaggagttggaggttgctgtgagcag-tgaagccatggcactctacccaggggggacagcttgaggctctgtctcaaaaaaaaaagaaggaaGTGTCTTTAGGCAGTGGAGTGGCAGGGAGGGAGGAGGCACCTCCAAATGACCTAGTGAGTTAGCCAATGC i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=112160.000000 s hg38.chr7_KI270899v1_alt 183005 46 + 190869 CGGGCTCCCAAAAA--CCA-------------------CTCTGggggtgaggatgggaggggagagg s panTro5.chr7_NW_015973580v1_random 58401 46 - 83720 CGGGCTCCCAAAAA--CCA-------------------CTCTGggggtgaggatgggaggggacagg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572573 46 + 162613886 CGGGCTCCCAAAAA--CCA-------------------CTCTGggggtgaggatgggaggggagagg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 144464 45 - 432965 CGGGCTCCCAAAAA--CCA-------------------CTCT-ggggtgaggatgggaggggagagg i gorGor5.CYUI01015914v1 I 125 C 0 s rheMac8.chr3 34054524 30 + 185818997 CGGGCTCCTGAAGAACCTA-------------------CTCTGGGG------------------AGG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4438738 30 - 9440265 CGGGCTCCTGAAGAACCTA-------------------CTCTGGGG------------------AGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17029080 30 - 21915920 CGGGCTCCTGAAGAACCTA-------------------CTCTGGGG------------------AGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 158074 30 - 21531802 CGGGCTCCGGAAGAACCTG-------------------CTCTGGGG------------------AGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 196020 30 - 2515279 CGGGCTCCTGAAGAACCTA-------------------CTCTGGGG------------------AGG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 350580 30 + 6586416 CGGGCTCCCGAAGAACCTG-------------------CTCTGGGG------------------AGG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 85228 46 + 138751 CAGGCTCCCAGAGAA-CCA-------------------CTCCAGGGGTGAGG-TGGGAGGGGAGAGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 397955 46 - 2409723 CACACTCCCAGAGAA-CCA-------------------CTCCAGGGGTGAGG-TGGGAGGGGAGAGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 559695 46 - 2125214 CACACTCCCAGAGAA-CCA-------------------CTCCAGGGGTGAGG-TGGGAGGTGAGAGG i cebCap1.NW_016107703v1 C 0 I 53 s aotNan1.NW_018514293v1 152489 45 + 376347 CAGGCTCCCAGAGAA-CCA-------------------CTCCA-GGGTGAGG-TGGGAGGGGAGAGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2286111 43 - 8137123 -TGGTCCAAGGAGGAACCAAGAACTAAGCAAGGGAGCCCTCCAG----------------------- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=-15260.000000 s hg38.chr7_KI270899v1_alt 183051 4 + 190869 -ag--------------------------------------------------------------------tt s panTro5.chr7_NW_015973580v1_random 58447 4 - 83720 -ag--------------------------------------------------------------------tg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572619 72 + 162613886 -agggggggTCCAGATAGCAGCCGGGCTCCCAAAAACCACTCTGggggtgaggatgggaggggagaggagtgg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 144509 4 - 432965 -ag--------------------------------------------------------------------tg i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34054554 4 + 185818997 -GG--------------------------------------------------------------------TG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4438768 4 - 9440265 -GG--------------------------------------------------------------------TG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17029110 4 - 21915920 -GG--------------------------------------------------------------------TG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 158104 4 - 21531802 -GG--------------------------------------------------------------------TG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 196050 4 - 2515279 -GG--------------------------------------------------------------------TG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 350610 4 + 6586416 -GG--------------------------------------------------------------------TG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 85274 4 + 138751 -AG--------------------------------------------------------------------TG i calJac3.chrUn_GL286444 C 0 I 49 s saiBol1.JH378296 398001 4 - 2409723 -AG--------------------------------------------------------------------TG i saiBol1.JH378296 C 0 I 49 s aotNan1.NW_018514293v1 152534 4 + 376347 -AG--------------------------------------------------------------------TG i aotNan1.NW_018514293v1 C 0 I 49 s otoGar3.GL873611 2286154 4 - 8137123 TGG--------------------------------------------------------------------T- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e cebCap1.NW_016107703v1 559741 53 - 2125214 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=1477412.000000 s hg38.chr7_KI270899v1_alt 183055 206 + 190869 gggggcaggAGGCAAG---TGAAAGTAAGTGCCCAGGGAACCTCCATGAGGCCCCCCACACCGGATAATAGTGTTCCATGGGGTCTGCTCAGCCCCATGTCTGCCCCAA-GACACTAGCCACAGCTCT-GCGTCGAGGTCCTGTAGACCACGGGAGAGAT----------GGGGGGGCCAGGAGCCTATAGAACTCCAAGTCCAAGGG-GACCCTTGCTGGG------ s panTro5.chr7_NW_015973580v1_random 58451 206 - 83720 gggggcaggAGGCAAG---TGAAAGTAAGTGCCCAGGGAACCTCCATGAGGCCCCCCACACTGGATAATTGTGTTCCATGGGGCCTGCTGAGCCCCATGTCTGCCCCGA-GACACTAGCCACAGCTCT-GCGTCGAGGTCCTGCAGACCACGGGAGAGAT----------GGGGGGGCCAGGAGCCTATAGAACTCCAAGTCCAAGGG-GACCCTTGCTGGG------ i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572691 207 + 162613886 gggggcaggAGGCAAG---TGAAAGTAAGTGCCCAGGGAACCTCCATGAGGCCCCCCACACTGGATAATAGTGTCCCATGGGGTCTGCTCAGCCCCATGTCTGCCCCGA-GACACTAGCCACAGCTCT-GCGTCGAGGTCCTGCAGACCACGGGAGAGATG---------GGGGGGGGCAGGAGCCTATAGAACTCCAAGTCCAAGGG-TACCCTTGCTGGG------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 144513 206 - 432965 gggggcagAAGGCAAG---TGAAAGTAAGTGCCCAGGGAACCTCCATGAGGCCCCCCACACTGGATAATAGTGTTCCATGGGGTCTGCTCAGCCCCATGTCTGCCCCGA-GACACCAGCCACAGCTCT-GTGTCGAGGTCCTGCAGACCACGGGAGAGAT----------GGGGGGGCCAGGAGCCTATAGAATTCCAAGTCCAAGGG-GACCCTTGCTGGG------ i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34054558 203 + 185818997 GGGGGCAGGAGGCGAG---TGGAAGTAAGTGCCCAGGGAATCTCCACGAGG--CCCCACACTGGATAATGGTGTTCCATGGGGTCTGGTCACCCCCATATCAG-CCCGA-GACACTAGCCACAGCTCT-GCGTCGAGGTCCTGCAGGCCACGGGAGAGATG---------GGGGGG--CAGAAGCCTACAGAACCCCAAGTCCAAGGGAGACCCTTGCTGGG------ i rheMac8.chr3 C 0 I 10 s macNem1.NW_012019910v1 4438772 202 - 9440265 GGGGGCAGGAGGCGAG---TGGAAGTAAGTGCCCAGGGAATCTCCACGAGG--CCCCACACTGGATAATGGTGTTCCATGGGGTCTGGTCACCCCCATATCGG-CCCGA-GACACTAGCCACAGCTCT-GTGTCGAGGTCCTGCAGGCCACGGGAGAGAT----------GGGGGG--CAGGAGCCTACAGAACCCCAAGTCCAAGGGAGACCCTTGCTGGG------ i macNem1.NW_012019910v1 C 0 I 5 s cerAty1.NW_012002954v1 17029114 203 - 21915920 GGGGGCAGGAGGCGAG---TGGAAGTAAGTGCCCAGGGAATCTCCACGAGG--CCCCACACTGGATAATGGTGTTCCATGGGGTCTGGTCACCCCCATATCTGCCCCGA-GACACTAGCCACAGCTCT-GCGTCGAGGTCCTGCAGGCCACGGGAGAGAT----------GGGGGG--CAGGAGCCTACAGAACCCCAAGTCCAAGGGAGACCCTTGCTGGG------ i cerAty1.NW_012002954v1 C 0 I 5 s chlSab2.chr28 158108 203 - 21531802 GGGGGCAGGAGACGAC---TGGAAGTAAGTACCCAGGGAATCTCCACGAGG--CCCCACACTGGATAATGGGGTTCCATGGGGTCTGGCCACCCCCATGTCTGCCCCGA-GACACTAGCCACAGCTCT-GTGTCGAGGTCCTGCAGGCCACGCGAGAGAT----------GGGGGG--CAGGAGCCTACAGAACCCCAAGTCCAAGGGAGACCCTCGCTGGG------ i chlSab2.chr28 C 0 I 5 s manLeu1.NW_012101810v1 196054 203 - 2515279 GGGGGCAGGAGGCGAG---TGGAAGTAAGTGCCCAGGGAATCTCCATGAGG--CCCCACACTGGATAATGGTGTTCCATGGGGTCTGGTCACCCCCATATCTGCCCCGA-GACACTAGCCACAGCTCT-GCGTCGAGGTCCTGCAGGCCACGGGAGAGAT----------GGGGGG--CAGGAGCCTACAGAACCCCAAGTCCAAGGGAGACCCTTGCTGGG------ i manLeu1.NW_012101810v1 C 0 I 5 s colAng1.NW_012117710v1 350614 203 + 6586416 GGGGGCAGGCGGCCAG---TGGAAATAAGTACCCAGGGAATCTCCACGAGG--CCCCACACTGGATAATGGTGTTCCATGGGGTCTGATCACCCCCATGTCTGCCCCGA-GACACTAGCCACAGCTCT-GTGTCGAGGTCCTGCAGCCCACGGGAGAGAT----------GGGGGG--CAGGAGCCTACAGAACCCCAAGTCCAAGGGAGACCCTTGCTGGG------ i colAng1.NW_012117710v1 C 0 I 5 s calJac3.chrUn_GL286444 85327 216 + 138751 GGGGGCAGGAGGTGAG---GGAAAGTAAGTTCCCAGGGAGCTTCCATGAAG-CCCCGACACCAGATGATTGTGTTCCATGGCATCTGGTCACTTCCATGTCTGCCCCGA-GACACTGGCCACAGCTCT-GTATCGAGGTCCTGCAGACCATGGGAGAGATGCAGTGGGCGGGGGAGGCCAGGAGCCTACAGATTCCGAAATCCAAGGGAGACACTTGCTGGG------ i calJac3.chrUn_GL286444 I 49 I 5 s saiBol1.JH378296 398054 216 - 2409723 GGGGGCAGGAGCTGAG---TGAAAGTAAGTTCCCAGGGAGCCTCCATGACG-CCCCCACACCGGGTGATTGTGTTCCATGGCATCTGGTCACCTCCATGTCTGCCCTGA-GACACTGGCCACAGCTCT-GCGTGGAGGTCCTGCAGACCACGGGAGAGACGCAGGGGGGAGGGGAGGCCAGGAGCCTACAGAACCCCAAATCCAAGGGACACACTTGCTGGG------ i saiBol1.JH378296 I 49 I 5 s cebCap1.NW_016107703v1 559794 216 - 2125214 GGGGGCAGGAGGTGAG---TGAAAGTAAGTTCCCAGGGAGTCTCCATGAGG-CCCCCACACCAGGTGATTGTGTTCCATGGCATCTAATCACCTCCATGTCTGCCCTGA-GACACTGGCCACAGCTCT-GCATCGAGGTCCTGCAGACCACGGGAGAGACGCAGGGAGTTGGGGAGGCCAGGAGCCTACAGAACCCCAAATCCAAGGGAGACACTTGCTGGG------ i cebCap1.NW_016107703v1 I 53 I 5 s aotNan1.NW_018514293v1 152587 216 + 376347 GGGGGCAGGAGGTGAG---TGAAAGTAAGTTCCCAGGGAGCCTCCATGAGG-CCCCCACACCAGGTGATTGTGTTCCATGGCGTCTGGTCACCTCCATGCCTGCCCCGA-GACACCGGCCACAGCTCT-GTATCGAGGTCCTGCAGACCACGGGAGAGACGCAGGGGGTGGGGGAGGCCAGGAGCCTACAGATCCCTGAATCTGAGGGAGACACTTGCTGGG------ i aotNan1.NW_018514293v1 I 49 I 5 s otoGar3.GL873611 2286158 214 - 8137123 GAGTGGAAAAGTCCAGACTTGATAGTAAGCATGCAGGGAGGTCTTATGAGG-CCCCCACAACTAATAGTGATGGTTCATCCAGTCAGGCCA-CCCTACATCTGGCTGAAGGACATCGGCCACAGCTTTGGTATCCAGGGTCCATGGTCA--GGGAGGGAT----------GGGGGTACCTGGGGCCTACAGAAACTCAAGGCCAAGGGAGATACTTGCTGGATTGGGG i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=157694.000000 s hg38.chr7_KI270899v1_alt 183261 30 + 190869 AGAACACAGGCCAAGACC----TTCCTTCCTGCC s panTro5.chr7_NW_015973580v1_random 58657 30 - 83720 AGAACACAGGCCAAGACC----TTCCTTCCTGCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572898 30 + 162613886 AGAACACAGGCCAAGACC----TTCCTTCCTGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 144719 30 - 432965 AGAACACAGGCCAAGACC----TTCCTTCCTGCC i gorGor5.CYUI01015914v1 C 0 C 0 s macNem1.NW_012019910v1 4438979 30 - 9440265 AGAACACAGGCCAAGACC----TTCCTTCCTGCC i macNem1.NW_012019910v1 I 5 C 0 s cerAty1.NW_012002954v1 17029322 30 - 21915920 AGAACACAGGCCAAGACC----TTCCTTCCTGCC i cerAty1.NW_012002954v1 I 5 C 0 s chlSab2.chr28 158316 18 - 21531802 AGAACACAGGCTAA----------------TGCC i chlSab2.chr28 I 5 C 0 s manLeu1.NW_012101810v1 196262 30 - 2515279 AGAACACAGGCCAAGACC----TTCCTTCCTGCC i manLeu1.NW_012101810v1 I 5 C 0 s colAng1.NW_012117710v1 350822 30 + 6586416 AGAACACAGGCCAAGACC----TTCCTTCCTGCT i colAng1.NW_012117710v1 I 5 C 0 s calJac3.chrUn_GL286444 85548 33 + 138751 AGAACACAGGCCAAAACAC-AGCTCCTTCCTGCT i calJac3.chrUn_GL286444 I 5 C 0 s saiBol1.JH378296 398275 33 - 2409723 AGAACACAGGCCAAGACAC-AGCTCCTTCCTGCC i saiBol1.JH378296 I 5 C 0 s cebCap1.NW_016107703v1 560015 33 - 2125214 AGAACACAGGCCAAGACAC-AGCTCCTTCCTGCT i cebCap1.NW_016107703v1 I 5 C 0 s aotNan1.NW_018514293v1 152808 33 + 376347 AGAACACAGGCCAAGACAC-AGCTCCTTCCTGCT i aotNan1.NW_018514293v1 I 5 C 0 s otoGar3.GL873611 2286372 31 - 8137123 TGAACACAGGCTCAGACCCAAGTTCCTTATC--- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e rheMac8.chr3 34054761 10 + 185818997 I e nomLeu3.chr20 205078 1942 + 85365473 M a score=422232.000000 s hg38.chr7_KI270899v1_alt 183291 62 + 190869 -ACAGGCTTCTGTCCCTGCTGTCTGCTCCCCCAGGACTCCCCCCACACCCGGGATCTTCCTCC s panTro5.chr7_NW_015973580v1_random 58687 62 - 83720 -ACAGGCTTCTGTCCCTGCTGTCTGCTCCCCCAGGACTCCCCCCACACCTGGGATCTTCCTGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572928 62 + 162613886 -ACAGGCTTCTGTCCCTGCTGTCTGCTCCCCCAGGACTCCCCCCACACCCGGGATCTTCCTGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 144749 61 - 432965 -ACAGGCTTCTGT-CCTGCTGTCTGCTCCCCCAGGACTCCCCCCACACCTGGGATCTTCCTCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34054771 62 + 185818997 -ACAGGCTTCTGTCCCTGCTGTCCGCTCCCCTGGGACTCTCCCTGCACCCGGGATCTTCCCCC i rheMac8.chr3 I 10 C 0 s macNem1.NW_012019910v1 4439009 62 - 9440265 -ACAGGCTTCTGTCCCTGCTGTCCGCTCCCCTGGGACTCTCCCTGCACCCGGGATCTTCACCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17029352 62 - 21915920 -ACAGGCTTCTGTCCCTGCTGTCCGCTCCCCCGGGACTCTCCCTGCACCCGGGATCTTCCCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 158334 62 - 21531802 -GCAGGCCTCTGTCCCTGCCGTCCGCCCCCCCGGGACTCTCCCTGCACCTGGGATCTTCCCCC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 196292 62 - 2515279 -ACAGGCTTCTGTCCCTGCTGTCCGCTCCCCCGGGACTCTCCCTGCACCCGGGATCTTCCCCC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 350852 62 + 6586416 -ACAGGCTTCTGTCCCTGCTGTCTGCTCCCCCGAGACTCTCCCTGCACCCGGGATCTTCCCCC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 85581 62 + 138751 -GCAGGCATCTGTCCCTGCTGTCCCCTCCCCTGGGACTCTTCCTGCACCCCAGACCTTCCTCC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 398308 62 - 2409723 -GCAGGAATCTGTCCCTGCTGTCCCCTCCCCTGGGGCTCTCCCCGCACCCCGGACCTTCCTCC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 560048 62 - 2125214 -GCAGGCATCTGTCCCTGCTGTCCCCTTCCTTGGGACTCTCTCCGCACCCTGGACTTTCCTCC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 152841 62 + 376347 -GCAGGCATCTGTCCCTGCTGTCCCCTCCCCTGGGACTCTCCCCGCACCCCGGACCTGCCTCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2286403 48 - 8137123 ACAAGGCATCTGCAGCTGGT-----CTGGGAGGGGGCTTCCTTCACACC-------TTCC--- i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M e nomLeu3.chr20 205078 1942 + 85365473 M a score=1443124.000000 s hg38.chr7_KI270899v1_alt 183353 168 + 190869 TCACCCTCCTTGGCCTCTCTCAGTGACCCTGTCTACACACAGATG----TGCTGTCCATGTGAGTGGAAGGA-AGGAAGGATGAGGTCCACTCACAGGGGTGAAGCTGTCTCCTGAGGGGGcagcccacctccaggtcacacc-------------------gccccacccaacacagcctccag-tc-cagct s panTro5.chr7_NW_015973580v1_random 58749 168 - 83720 TCACACTCCTTGGCCTCTCTCAGTGACCCCGTCTACACACAGATG----TGCTGTCCATGTGAGTGGAAGGA-AGGAAGGATGAGGCCCACTCACAGGGGTGAAGCTGTCTCCTGAGGGGGcagcccacctccaggtcacacc-------------------gccccacccaacacagcctccag-tc-cagct i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 572990 168 + 162613886 TCACCCTCCTTGGCCTCTCTCAGTGACCCCGTCTACACACAGATG----TGCTGTCCATGTGAGTGGAAGGA-AGGAAGGATGCAGTCCACTCACAGGGGTGAAGCTGTCTCCTGAGGGGGcagcccacctccaggtcacacc-------------------gccccacccaacacagcctccag-tc-cagct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 144810 168 - 432965 TCACCCTCCTTGGCCTCTCTCGGTGACCCTGTGTACACACAGATG----TGCTGTCCATGCGAGTGGAAGGA-AGGAAGGATGAGGTCCACTGACAGGGGTGAAGCTGTCTCCTGAGGGGGcagcccacctccaggtcacacc-------------------gccccacccaacacagcctccag-tc-cagct i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 207042 168 + 85365473 TCACCCCCCTTGGCCTCTCTCGGTGACCCTGTCTACACACAGATG----TGCTGTCCATGTGAGTGGAAGGA-AGGAAGGATGAGGTCCTCTCACAGGGGTGAAGCTGTCTCCTGAGGGGGCAACCCACCTCCAGGTCACACC-------------------GCCCCACCCAACACAGCATGCAG-TC-CAGCT i nomLeu3.chr20 M 1942 C 0 s rheMac8.chr3 34054833 165 + 185818997 TCACCCTTCTTGGCCTCTCTCGGTGACCCTGTCTACACACAGATG----TGCTGTCCATGTGAGT----GGA-AGGAAGGATGAAGTCCACTCACAGGGATGAGGCTGTCTCCCAGGGGGGCGGCCCACCTCCAGGTCACACC-------------------GCCCCACCCAACACAGCCTCCAG-TCGCAGCT i rheMac8.chr3 C 0 I 2 s macNem1.NW_012019910v1 4439071 164 - 9440265 TCACCCTCCTTGGCCTCTCTCGGTGACCCTGTCTACACACAGATG----TGCTGTCCATGTGAGT----GGA-AGGAAGGATGAAGTCCACTCACAGGGATGAGGCTGTCTCCCGGGGGGGCGGCCCACCTCCAGGTCACACC-------------------GCCCCATCCAACACAGCCGCCAG-TC-CAGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17029414 164 - 21915920 TCACCCTCCTTGGCCTCTCTCAGTGACCCTGTCTACACACAGATG----TGCTGTCCATGTGAGT----GGA-AGGAAGGATGAAGTCCACTCACAGGGATGAGGCTGTCTCCCGGGGGGGCAGCCCACCTCCAGGTCACACC-------------------GCCCCACCCAACACAGCCTCCAG-TC-CAGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 158396 163 - 21531802 TCATCCTCCTTGGCCTCTCTCGGCGGCCCTGTCTACACACAGAGG----TGCTGTCCATGTGAGT----GGA-AGGAAGGATGAAGTCCACTCACAGGGATGAAGCTGTCTCCC-TGGGGGCGGCCCACCTCCAGGTCACACC-------------------GCCCCACCCAACACAGCCTCCAG-TC-CGGCT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 196354 164 - 2515279 TCACCCTCCTTGGCCTCTCTCGGTGACCCTGTCTACACACAGATG----TGCTGTCCATGTGAGT----GGA-AGGAAGGATGAAGTCCACTCACAGGGATGAGGCTGTCTCCCGGGGGGGCGGCCCACCTCCAGGTCACACC-------------------GCCCTACCCAACACAGCCTCCAG-TC-CAGCT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 350914 164 + 6586416 TCATCCTCCTTGGCCTCTCTCGGTGACCCTGTCTACACACAGATG----TACTGTCCATGTGAGT----GGA-AGGAAGGATGAAGTCCACTCCCAGGGATGACGCTGTCTCCGGGGGGGGCGGCCCACCTCCAGGTCACACC-------------------ACGCCACCCAACACAGCATCCAG-TC-CAGCT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 85643 182 + 138751 TCACCCTCCTTGACCTTTCTTGGTGACCCTGTCTACACACAGATA----TGCTGCCCATGTGAGT----GGA-AGGAAGGACAAGGTCCACTCACAGGGGTGAAGCTGTCTCCC-TGGCAGTGGCCCACTTCCAGGTCACACCGACCTTCACTCTGGTCTCTGCCCCACCCAACACAGCCTCCAA-TC-CAGCT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 398370 182 - 2409723 TCACCCTCCTTGGCCTCTCTTTGTGACCCTGTCTACACACAGATG----TGCTGTCCATGTGAGC----GGA-AGGAAGGATGAGGTCCACTCACAGGGGTGACTCTGTCTCCC-CGGCAGTGGCCCACTTCCAGGTCACACCAACCTTCACTCTGGTCTCTGCCCCACCCAACACAGCCTCCAG-TC-CAGCT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 560110 181 - 2125214 TCACCCTCCTTGGCCTCTCTTGGTGACCCTGTCTACACACAGATG----TGCTGTCCATGTGAGT----GGA-AGGAAGGATGAGGTCCACTCACAGGGGTGAAGCTGTCTCCC-CGTCGGTGG-CCACTTCCAGGTCACACCAACCTTCACTCTGGTCTCTGCCCCCCACAACACAGCCTCCAG-TC-CAGCT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 152903 182 + 376347 TCACCCTCCTTGGCCTCTCTTGGTGACCCTGTCTACACACAGATG----TGCTGTCCATGTGAGC----GGA-AGGAAGGGTAAGGTCCACTCACAGGGGTGAAGCTGTCTCCC-CGGCGGTGGCCCACTTCCAGGTCACACCAGCCTTCACTCTGGTCTCTGCCCCACCCAACACAGCCTCCAG-TC-CAGCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2286451 164 - 8137123 ATAATCTCCTTGGTCTCTCTGGATAACCCTATCTGCACCCAAATGTGCTTGCTGTCCACACAAGC----AGACAGGAAAAAAGA-----------AGGGGTGAGCCTATGTCCT--CTGGGTGGCCCATTTCCAGGTCAAACT------------GATCTCTGCCCTTCCCCCAATAGCCCCCAGCTC-CAACT i otoGar3.GL873611 C 0 C 0 e canFam3.chr6 61074004 2046 - 77573801 I e macFas5.chr3 33669454 3543 + 192294377 M a score=4335911.000000 s hg38.chr7_KI270899v1_alt 183521 522 + 190869 ccagGTGGG---CCGCACCCAGCCCTTCACTCACTTC-AAATGGCCCAAGAC---GCATGGATTCCACTGGCCAGCCGGACTGGAACAACTTCTCCCCTT---ATAAGTatctagtgggtgcccacggaatgccaggcaatgggccaggctcagagatgagtgattcctcaggaacaatggg-ctcaacgcccttaattcacatcagaggaaactgaggctcagagagggcggagagggccctggtaacacagccagccggtgaaag-taagagggggggcccag------gccctg--ctcccgg----cccACCCGCCTGGGCTTGCT--------------------GGCGAGGCTGCTGGCCCA--------GGCAGTCT---GGGCACTGTGGAAGCAGCCGGCTTGAGGCACAGGGGatgtggcctcctcccacacacttacctccctgacta-catcttaggctgacatccagattaactcatattccctACAGGGAGCTGCACGGCCAGAAGCTGCTGGTTGCAGAAGCCACCAGCTGGTTGTACAAGCACCGCT-CCCCTGGTTGTGGGT s panTro5.chr7_NW_015973580v1_random 58917 522 - 83720 ccaggtggg---ccgcacccagcccTTCACTCACTTC-AAATGGCCCAAGAC---GCATGGATTCCACTGGCCAGCCGGACTGGAACAACTTCCCACCTT---GTAAGTAACtagtgggtgcccacggaatgccaggcaatgggccaggctcagagatgagtgattcctcaggaacaatggg-ctcaacgcccttaattcacatcagaggaaactgaggctcagagagggcagggagggccctggtaacacagccagctggtgaaag-taagagtgggggcccag------gccctg--ctcccag----cccACCCGCCTGGGCTTGCT--------------------GGCGAGGCTGCTGGCCCA--------GGCAGTCT---GGGCACTGGGGAAGCAGCCGGCTTGAGGCGCAGGGGatgtggcctcctcccacacacttacctccctgacta-catcttaggctgacatccacattaactcatattccctACTGGGAGCTGCACGGCCAGAAGCTGCTGGTTGCAGAAGCCACCAGCTGGTTGTACAAGCACCGCT-CCCCTGGTTGTGGGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 573158 523 + 162613886 ccagGTGGG---CCGCACCCAGCCCTTCACTCACTTC-AAATGGCCCAAGAC---GCATGGATTCCACTGGCCAGCCGGACTGGAACAACTTCTCCCCTT---ATAAGTatctagtgggtgcccacggaatgccaggcaatgggccaggctcagagatgagtgattcctcaggaacaatggg-ctcaacgcccttaattcacatcagaggaaactgaggctcacagagggcagggagggccctggtaacacagccagctggtgaaag-taagagtgggggcccag------gccctg--ctcccag----cccACCCGCCTGGGCTTGCT--------------------GGCGAGGCTGCTGGCCCA--------GGCAGTCT---GGGCACTGGGGAAGCAGCCGGCTTGAGGCGCAGGGGatgtggcctcctcccacacacttacctccctgactg-catcttaggctgacatccacattaactcatattccctACTGGGAGCTGCACGGCCAGAAGCTGCTGGTTGCAGAAGCCACCAGCTGGTTGTACAAGCACCGCTCCCCCTGGTTGTGGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 144978 523 - 432965 ccaggtggg---ccacacccagcccTTCACTCACTTC-AAATGGCCCAAGAC---GCATGGATTCCACTGGCCAGCCGGACTGGAACAACTTCTCCCCTT---GTAAGTatctagtgggtgcccacggaatgccaggcaatgggccaggctcagagatgagtgattcctcaggaacaatggg-ctcaacgcctttaattcacatcagaggaaactgaggctcagagagggcagggagggccctggtaacacagccagccggtgaaagttaagagggggggcccag------gtcctg--ctcccag----cccACCCGCCTGGGCTTGCT--------------------GGCGAGGCTGCTGGCCCA--------GGCAGTCT---GGGCACTGGGGAAGCAGCCGGCTTGAGGCACAGGGGatgtggcctcctcccacacacttacctccctgacta-catcttaggctgacatccacattaactcatattccctACTGGGAGCTGCACGGCCAGAAGCTGCTGGTTGCAGAAGCCACTAGCTGGTTGTACAAGCACCGCT-CCCCTGGTTGTGGGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 207210 504 + 85365473 CCAGGGGGG---CCGCACCCAGCCCTTCACTCACTTC-AAATGGCCCAAGAC---GCATGGATTCCACTGACCAGCCGGACTGGAACAACTTCTCCCCTT---ATAAGTatctagtgggtg-ctacggaatgccaggcgttgggccaggctcagagatgagtgattcctcaggaacaatggg-ctcaacgcccctaattcacataagaggaaactgaggcccagagagggcagggagggccctggtaacacggccagct-gtgaaag-taagagtggccgcccag------gccctg--ctcccag----cccACCCGCCTGGGCTTGCT--------------------GGAGAGGCTGCTGGCCCA--------GGCAGTCT---GGGCACTGGGGAAGCAGCTGGCTTGAGGGACAGGGGATGTGGCCTCCTACCACACACTTACCTCCCTGACTA-CATCTTAGGCTGACATCCACATTAACTCATATTCCCTCCTGGGGGCTGCACAGC----------------CAGAAGCCACCAGCTGGTTGTACAAGCACTGCT-CCCCTGGGTGTGGGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34055000 501 + 185818997 GCAGGTGGGCCCCCGCACCAGCCCTTCCAGTCACTTTAAGATGGCCCGAGAG---ACATGGATTCCACTGACCAGCC---------CCACTTCTCCCCTT---ATAAGTatctagtgggtgcccacggaatgccaggcattggg-caggctcagagatgagtgagtcctcaggaacaacgag-ctcaatgtcctgaattcacat-aaaggaaactgaggctcagagagggcagggtgggcccaggtaaca-agccagcgagtgattt-attgaaggggggcccag------gccctg--ctcccag----cccACAGGCCTGGACTTGCT--------------------GCAGAGGCTGCTGGCCCA--------GGCAATCT---GGGCACTGGGGAAGCAGCTGGCTTGGGGGACA--------GGCCTCCTCCCACACACTTACCTCCCTGACTAGGATCTTAGGCTGACATCCACCTCCCCTTATATTCCCTACTGGGGGCTGGGGGGCCAGAAGCTGCTGCTTGCAGAAGCCAC------ATTGTACAAGCACCGCT-GCCCTGGGTGTGGGT i rheMac8.chr3 I 2 C 0 s macFas5.chr3 33672997 497 + 192294377 CCAGGTGGG---CCGCACCCAGCCCTTCACTCACTTC-AGATGGCCCGAGAG---ACATGGATTCCACTGACCAGCC---------CCACTTCTCCCCTT---ATAAGTatctagtgggtgcccacggaatgccaggcattggg-caggctcagagatgagtgagtcctcaggaacaacgag-ctcaatgtcctgaattcacat-aaaggaaactgaggctcagagagggcagggtgggcccaggtaaca-agccagcgagtgaaag-aaagaaggggggcccag------gccctg--ctcccag----cccACAGGCCTGGACTTGCT--------------------GCAGAGGCTGCTGGCCCA--------GGCAATCT---GGGCACTGGGGAAGCAGCTGGCTTGGGGGACA--------GGCCTCCTCCCACACACTTACCTCCCTGACTAGGATCTTAGGCTGACATCCACCTCCCCTTATATTCCCTACTGGGGGCTGGGGGGCCAGAAGCTGCTGCTTGCAGAAGCCAC------ATTGTACAAGCACCGCT-GCCCTGGGTGTGGGT i macFas5.chr3 M 3543 C 0 s macNem1.NW_012019910v1 4439235 506 - 9440265 CCAGGTGGG---CCGCACCCAGCCCTTCACTCACTTC-AGATGGCCCGAGAG---ACATGGATTCCACTGACCAGCC---------CCACTTCTCCCCTT---ATAAGTatctagtgggtgcccacggaatgccaggcattgggccaggctcagagatgagtgagtcctcaggaacaacgag-ctcaatgtcctgaattcacat-aaaggaaactgaggctcagagagggcagggtgggcccaggtaaca-agccagcgagtgaaag-aaagaaggggggcccag------gccctg--ctcccag----cccACAGGCCTGGACTTGCT--------------------GCAGAGGCTGCTGGCCCA--------GGCAATCT---GGGCACTGGGGAAGCAGCTGGCTTGGGGGACAGGGGGTGTGGCCTCCTCCCACACACTTACCTCCCTGACTAGGATCTTAGGCTGACATCCACCTCCCCTTATATTCCCTACTGGGGGCTGGGGGGCCAGAAGCTGCTGCTTGCAGAAGCCAC------GTTGTGCAAGCACCGCT-GCCCTGGGTGTGGGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17029578 505 - 21915920 CCATGTGGG---CCGCACCCAGCCCTTCACTCACTTC-AGATGGCCCGAGAG---ACATGGATTCCACTGACCAGCC---------CCACTTCTCCCCTT---ATAAGTatctagtgggtgcccacggaatgccaggcattgggccaggctcagagatgagtgagtcctcaggaacaacgag-ctcaatgtcctgaattcacat-aaaggaaactgaggctcagagagggcagggtgggcccaggtaaca-agccagcgagtgaaag-aaagaaggggggcccag------gccctg--ctcccag----cccACAGGCCTGGACTTGCT--------------------GCAGAGGCTGCTGGCCCA--------GGCAATCT---GGGCACT-GGGAAGCAGCTGGCTTGGGGGACAGGGGGtgtggcctcctcccacacacttacctccctgactaggatcttaggctgacatccacctccccttatattccctactgggggctgggggaccagaagctgctgCTTGCAGAAGCCAC------GTTGTACAAGCACCGCT-GCCCTGGGTGTGGGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 158559 505 - 21531802 CCAGGGGGG---CCGCACCCAGCCCTTCACTCACTTC-AGATGGCCCAAGAG---ACACGGATTCCACTGACCAGCC---------CCACTTCTCCCCTT---ATAAGTatctagtgggtgcccaccgaatgccaggcattgggccaggctcagagatgagtgagtcctcaggaacaacgag-ctcaatgtcctgaattcacat-aaaggaaactgaggctcagagagggcagggagggcccaggtaac--agccagcgagtgaaag-aaagaaggggggcccag------gccctg--ctcccag----cccACCGGCCTGGGCTTGCT--------------------GCAGAGGCTGCTGGCCCA--------GGCAATCT---GGGCACTGGGGAAGCAGCTGGTTTGGGGGACAGGGGGTGTGGCCTCCTCCCACACACTTACCACCCTGACTAGGATCTTAGGCTGACATCCACATTCACTCATATTCCCTACTAGGGGCTGGGGGACCAGAAGCTGCCACTTGCAGAAGCCAC------GTTGTACAAGCACCGCT-GCCCTGGGTGTGGGT i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 196518 505 - 2515279 CCAGGTGGG---CCGCACCCAGCCCTTCACTCACTTC-AGATGGCCCGAGAG---ACATGGATTCCACTGACCAGCC---------CCACTTCTCCCCTT---ATAAGTatctagtgggtgcccacggaatgccaggcattgggccaggctcagagatgagtgagtcctcaggaacaacgag-ctcaatgtcctgaattcacat-aaaggaaactgaggctcagagagggcagggtgggcccaggtaaca-agccagcgagtgaaag-aaagaaggggggcccag------gccctg--ctcccag----cccACAGGCCTGGACTTGCT--------------------GCAGAGGCTGCTGGCCCA--------GGCAATCT---GCGCACT-GGGAAGCAGCTGGCTTGGGGGACAGGGGGTGTGGCCTCCTCCCACACACTTACCTCCCTGACTAGGATCTTAGGCTGACATCCACCTCCCCTTATATTCCCTACTGGGGGCTGGGGGGCCAGAAGCTGCTGCTTGCAGAAGCCAC------GTTGTACAAGCACCGCT-GCCCTGGGTGTGGGT i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 351078 506 + 6586416 CCAGGTGGG---CCGCACCCAGCCCTTCACTCACTTC-AGATGGCCCGGGAG---ACATGGATTCCACTGACCAGCC---------CCACTTCTCCCCTT---GTAAGTatctagtgggtgcccaccaaatgccaggcattgggccaggctcagagatgagtgagtcctcaggaacaatggg-ctcaatgccctgaattcacat-aaaggaaactgaggctcagagagggcagggagggcccaggtaacacagccagccagtgaaag-aaagaaggggagcccag------gctctg--ctcccag----cccaagggcctgggcttgct--------------------gcagaggctgcccGCCCA--------GGCAATCT---GGGCACTGGGGAAGCAGCTGGCTTGGGGGAAA-GGGGtgtggcctcctcccacacacttacctccctgactaggatcttaggctgatatccacattaactcatattccctACTGGGGGCTGGGGGGCCAGAAGCTGCCAGTTGCAGAAGCCAC------GTTGTACAAGCACCGCT-GCCCTGGGTGTGGGT i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 85825 504 + 138751 CCCAGTGGG---CCGCACTGAGCATTTCACTCACTTC-AGATGGCCCAAGAG---CCATGGATTCCACTGACCAGCT-AGCGGGAACAA---CTccactt---ataagtatctagtgggtg-----------ccaggcattgggtgaggcacagagatgagtgagtcctcagtaacactggg-ttcaacgttcataattcacataagaggaaactgaggctcagagaggtccatgagggcccaggtaacagagacagtgagtgaaag-aaaaaggaggggcccag------gccctg--ctcccag----cccACCCAGCTGGGCTT-CT--------------------GGAGAGGCCGCTGGCCTGCC-----CGGGAATCT---GGGCACTGGGGCAGCGGCCAGCTTGGGGGACAGGGGGTGTGGCCTCCTCGCACACACTTATCTCCCTGACTAGGATCTTAGGCTGACATCCACATTAACTCGGATTCCCTACTGGGGGAGGGAGGCCCAGAAGCTGCTGGCCACAGAAGCCAC------GTTGTACAGGCACCGTT-CCCCTGGGTGTGGGT i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 398552 503 - 2409723 CCTGGTGGG---CCGCACTGAGCCCTTCACTCGCGGC-AGATGGCCCAAGAG---CCACGGATTCCACTGACTAGTT-GGCGGGAACAACTCCTccactt---ataagtatctagtgggtg-----------ccaggcattgggccaggcacggagatgagcgagtcctcaggaacactggg-ttcaacgtccataattcacataagaggaaactga-gctcagagaggcccatgagggcccaggtaac--agacagtgagtgaaag-aaagaggaagggcccag------gccctg--ctcccag----cccgCCCACCTGGGCTT-CT--------------------GGAGAGGCTGCTGGCCTGCC-----CGGGAATCT---GGGCACTGGGGCAGCGGTCAGTTTGGGGGACAGGGGGtgtggcctcctcgcacacacttacctccctgactaggatcttaggctgacatcc-cattaactcagattccctACTGGGGAAGGGAAGCCCAGAAGCTTCTGGCCACAGAAGCCGC------GTTGTACAGGCACCGCT-CCCCTGGGTGTGGGT i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 560291 503 - 2125214 CCTGGTGGG---CCGCACTGAGCCCTTCACTGGCTTC-AGATGGCCCAAGAG---CCATGGATTCCACTGACTAGCT-GGCGAGAACAACTCCTccactt---ataagtatctagtgggtg-----------ccaggcattgggccaggcacggagatgagtgagtcctcaggaacactggg-ttcaacgtccataattcacataagaggaaactgaggctcagacaggcccatgaaggcccaggtacc--agacagtaagtaaaag---agaggaggggcccag------gccctg--ctcccag----cccgCCTACCTGGGCTT-CT--------------------GGAGAGGCTGCTGGCCTGCC-----TGGGAATCT---CGGCACTGGGGTAGCGGCCAGCTTGGGGGACAGGGAGtgtgggctcctcgcacacacttacctccctgactaggatcttaggctgacatccacattaactcagatttcctactgggggaaggaggcccagaagctgctggCCACAGAAGCCAC------GTTGTACAGGCACTGCT-CCCTTGGGTGTGGGT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 153085 499 + 376347 CCTGGTGGG---CCGCACTGAGCCCTTCACTCGCTTC-AGATGGCCCAAGAG---CCATGGATTCCACTGACTAGCT-GGCGGGAACAAGTCGTCCACTt----taagtatctagtgggtg-----------ccaggcattgggccaggcacggagatgagcgagtcctcaggaacactgggtttcaacgtccataactcacacaagaggaaac--aggctcggagaggcccatgagggcccaggtaac--ag-cagtgagtgaagg-aaagagGAGGGGCCCAG------GCCCTG--CTCCCGG----CCCGCCCGCCTGGGCTT-CT--------------------GGAGAGGCCGCTGGCCTGCC------GGGAATCT---GGGCACTGGGGCAGCGGCCAGCTTGGGGCACAGGGGGtgtggcctcctcgcacacacttacctcc--gactaggatcttaggctgacatccgcattaactcagattccctactgggggagggaggcccagaagctgctggCCACAGAGGCCAC------GTTGTACAGGCACCGCT-CCCCTGCGTGTGGGT i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2286615 433 - 8137123 ---------------------------------------------ACAGGAGTTCACACTTATTTCACTGACTAGCT-GCTTGGGGCCCCttcacttcatccaacaagtatctagtgggcacctagtgaatgtcaggcactgggccaggcac----------tagtccacaggaatgaTATG-CTCAATGTCCT----------------AAACTGG----------------------------------GGTGAGTGAGGGAATG-CAAGAGAAGGGGCCCAGCTCTGTGCCCTGCCCTCCCAGGGGCCCCACCCTCTCAGTCTTGCTGCTGGATCAGTGCTAGGTAGGGAGGGGTTCTTCACTCATCTGCTTTGGAAACCTCCAGCACACTGAGAGCAGAATCATTGTGCTGGGCGGTGGGCGTG--------TCACGACCCCTCCTCTCAG-CTA--------------CACTCACATTAATTAATATTCCATGTTGGAGGCTGGAGATTCAGACGCAG-------AATAGGCCAC------G-TGTAGCAGCGTCTTT-CCTCTGTGTGTGTGT i otoGar3.GL873611 C 0 I 35 e canFam3.chr6 61074004 2046 - 77573801 I a score=242987.000000 s hg38.chr7_KI270899v1_alt 184043 31 + 190869 GACAGATGAGATGCACTCACGTGAACACACA s panTro5.chr7_NW_015973580v1_random 59439 31 - 83720 GACAGATGAGATGCACTCACGTGAACACACA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 573681 31 + 162613886 GACAGATGAGATGCACTCACGTGAACACACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 145501 31 - 432965 GACAGATGAGATGCACTCACGTGAACACACA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 207714 31 + 85365473 GACAGATGAGACACACTCACGTGAACACACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34055501 31 + 185818997 GACAGATGAGATGCACTCGCGTGcacacaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33673494 31 + 192294377 GACAGATGAGATGCACTCGCGTGcacacaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4439741 31 - 9440265 GACAGATGAGATGCACTCGCGTGcacacaca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030083 31 - 21915920 GACAGATGAGATGCACTCGCGTGCACACACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159064 31 - 21531802 GACAGATGAGATGCACTCGCGTGcacacaca i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 197023 31 - 2515279 GACAGATGAGATGCACTCGCGTGcacacaca i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 351584 31 + 6586416 GACAGATGAGATGCACTTGCGTGcacacaca i colAng1.NW_012117710v1 C 0 M 3415 s calJac3.chrUn_GL286444 86329 20 + 138751 GACAGATGAGACCCACTTGT----------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 399055 20 - 2409723 GACGGATGGGacgcactcgc----------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 560794 20 - 2125214 GACGAATGAGATGCACTCGC----------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 153584 31 + 376347 GACGGATGAGacgcactcgcgtgcacacaca i aotNan1.NW_018514293v1 C 0 I 45 e otoGar3.GL873611 2287048 35 - 8137123 I e canFam3.chr6 61074004 2046 - 77573801 I a score=76525.000000 s hg38.chr7_KI270899v1_alt 184074 26 + 190869 TGCATGtgcacacacaca--tgcacaca s panTro5.chr7_NW_015973580v1_random 59470 28 - 83720 TGCATGTGcacacacacacatgcacaca i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 573712 18 + 162613886 TGCATGGGCGcacacaca---------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 145532 18 - 432965 TGCACGTGCGCACACACA---------- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 207745 20 + 85365473 TGCATGTGcacacacacg--------ca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34055532 28 + 185818997 tgcatgtgcacgcacatacaaacacaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33673525 28 + 192294377 tgcatgtgcacgcacatacaaacacaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4439772 28 - 9440265 tgcatgtgcacgcacatacaaacacaca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030114 28 - 21915920 TGCATGTGcacgcacatacaaacacaca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159095 18 - 21531802 tgcatgtgcac----------acacaca i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 197054 28 - 2515279 tgcatgtgcacgcacatacgaacacaca i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 86349 14 + 138751 -----GTCcacacacacat--------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 399075 14 - 2409723 -----gtgcacacacacat--------- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 560814 21 - 2125214 -----GTGcacacacacatgcacaca-- i cebCap1.NW_016107703v1 C 0 I 66 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e otoGar3.GL873611 2287048 35 - 8137123 I e canFam3.chr6 61074004 2046 - 77573801 I e aotNan1.NW_018514293v1 153615 45 + 376347 I a score=20868.000000 s hg38.chr7_KI270899v1_alt 184100 9 + 190869 gacgcacac s panTro5.chr7_NW_015973580v1_random 59498 9 - 83720 gacgcacac i panTro5.chr7_NW_015973580v1_random C 0 C 0 s nomLeu3.chr20 207765 9 + 85365473 cacacacac i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34055560 9 + 185818997 cgcacgcac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33673553 9 + 192294377 cgcacgcac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4439800 9 - 9440265 cgcacgcac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030142 9 - 21915920 cgcacgcgc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159113 9 - 21531802 cacacgcac i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 197082 9 - 2515279 cgcacgcac i manLeu1.NW_012101810v1 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e otoGar3.GL873611 2287048 35 - 8137123 I e canFam3.chr6 61074004 2046 - 77573801 I e aotNan1.NW_018514293v1 153615 45 + 376347 I e saiBol1.JH378296 399089 0 - 2409723 C e cebCap1.NW_016107703v1 560835 66 - 2125214 I e calJac3.chrUn_GL286444 86363 0 + 138751 C e panPan2.chr7 573730 0 + 162613886 C e gorGor5.CYUI01015914v1 145550 0 - 432965 C a score=271680.000000 s hg38.chr7_KI270899v1_alt 184109 98 + 190869 acaaacaca----------------------------------cacaggc--atacacacgcacacgcacatc--cacac----------------------------------------------------acacacatgcgcacacacacgcacacGCCTGCACTCACACACCCCCGTCGGCCCCA s panTro5.chr7_NW_015973580v1_random 59507 96 - 83720 acacaggca----------------------------------taca--c--acgcacacgcacacgcacatc--cacac----------------------------------------------------acacacatgcgcacacacacgcacacgcctgcactcacacacCCCCGTCGGCCCCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 573730 91 + 162613886 -------ca----------------------------------cacaggc--atacatacgcacacgcacatc--cacac----------------------------------------------------acacacatgcgcgcacacacgcacacgcctgcactcacacacCCCCGTCGGCCCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 145550 85 - 432965 -------------------------------------------------A--ATGCATacacacacgcacatccacacac----------------------------------------------------acacacatgcgcacacacacgcacacGCCTGCACTCACACACCCCGGTCGGCCCCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 207774 116 + 85365473 atgcataca----------------------------------cacacgc--acacacacgcacacacacatc--cacacaca------------cagttacacat----------------------ccagacacacacgcgcacacacacgcacacgcctgcactcacacacCCCCGTCGGCCCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34055569 149 + 185818997 acacacaaa----------------------------------cacacactcatgcacatgcacacacacacg--cacacacacaaacacacactcatgtacacacacactcatgcacacgcacaa--acacacacgcacacgcacacacacgcacacgcctgcactcacacacCCC-GTCGGCCCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33673562 149 + 192294377 acacacaaa----------------------------------cacacactcatgcacatgcacacacacacg--cacacgcacaaacacacactcatgtacacacacactcatgcacacgcacaa--acacacacgcacacgcacacacacgcacacgcctgcactcacacacCCC-GTCGGCCCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4439809 145 - 9440265 acacacaaa----------------------cacacact----catgcac--atgcacacacacacgcacaca--cacacact------------catgtacacacacactcatgcacacgcacaaacacacacacgcacacgcacacacacgcacacgcctgcactcacacacCCC-GTCGGCCCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030151 165 - 21915920 acacacacacactcatgcacatgcacacacacacacactcacgcacacgc--acacacacacacacacactct--ctcatgca------------------cacacacactcatgcacatgcacaaacacacacacgcacacgcacacacacgcacacgcctgcactcacacacCCC-GTCGGCCCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159122 127 - 21531802 acaaaca------------------------------------------c--acacacaaacacacacacgca--cacacacacaaacacacatgcacgcacacaaacac----acac----------acaaacacacacactcatgcacacgcacacgcctgcactcacacacCCC-GTGGGCCCCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 197091 147 - 2515279 acaaacaca----------------------cactcatg----cacatgc--acacacacacacgcacacgca--cacacacacgcacacacactcatgcacacacacactcatgcac----------atgcacaaacacacgcacacacacgcacacgcctgcactcacacacCCC-GTCGGCCCCA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 86363 78 + 138751 ------------------------------------------------------------gcacacgcaaacc--cacacacac--------------------------------------------aaacacacacatacacTCGTGCATACGCGCGGCTGCACTCACACACTCC-GT---CCCTA i calJac3.chrUn_GL286444 C 0 I 2 s saiBol1.JH378296 399089 70 - 2409723 ------------------------------------------------------------gcacacacaaccc--ccc----------------------------------------------------ccacacacacacactcgcgcgtgcgcgcgactacactcaagcacCCC-GT---CCCTA i saiBol1.JH378296 C 0 I 2 s otoGar3.GL873611 2287083 58 - 8137123 --------------------------------------------------------AGAAacacacacacaca--cacac----------------------------------------------------acacacatacacacatacacTGCCTCGCCCAGA-----GCA--------------- i otoGar3.GL873611 I 35 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e aotNan1.NW_018514293v1 153615 45 + 376347 I e cebCap1.NW_016107703v1 560835 66 - 2125214 I a score=601302.000000 s hg38.chr7_KI270899v1_alt 184207 83 + 190869 AGCAGGAAGGCG-CCCCCGGCACA---CCAGCCCCTCTCAGCGCC-------CCCAGC---GGG-CCCGGCGC--CTGGAGGGTTAAGGCG--GGCGCGTC-C s panTro5.chr7_NW_015973580v1_random 59603 83 - 83720 AGCAGGAAGGCG-CCCCCAGCACA---CCAGCCCCTCTCAGCGCC-------CCCAGC---GGG-CCCGGCGC--CTGGAGGGTTAAGGCG--GGCGCGTC-C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 573821 84 + 162613886 AGCAGGAAGGCG-CCCCCAGCACA---CCAGCCCCTCTCAGCGCC-------CCCAGC---GGGCCCCGGCGC--CTGGAGGGTTAAGGCG--GGCGCGTC-C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 145635 83 - 432965 AGCAGGAAGGCG-CCCCCAGCACA---CCAGCCCCTCTCAGCGCC-------CCCAGC---GGG-CCCGGCGC--CTGGAGGGTTAAGGCG--GGCGCGTC-C i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 207890 74 + 85365473 AGCAGGAAGGCG-CCCCCAGCACA---CCAGCCCCTCT----------------CAGC---GGG-CCCGGCGC--CGGGAAGGTTAAGGCA--GGCGCGTC-C i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34055718 83 + 185818997 AGCAGGAAGGCG-CCCCCCGCACA---CCAGCCCCTCTCTGCGCC-------CCCAGC---GGG-CCCGGAGT--CCGGAGGGTTAAGGCG--GGCGCGTC-C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33673711 83 + 192294377 AGCAGGAAGGCG-CCCCCCGCACA---CCAGCCCCTCTCTGCGCC-------CCCAGC---GGG-CCCGGAGT--CCGGAGGGTTAAGGCG--GGCGCGTC-C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4439954 83 - 9440265 AGCAGGAAGGCG-CCCCCCGCACA---CCAGCCCCTCTCTGCGCC-------CCCAGC---GGG-CCCGGAGT--CCGGAGGGTTAAGGCG--GGCGCGTC-C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030316 83 - 21915920 AGCAGGAAGGCG-CCCCCCGCACA---CCAGCCCCTCTCTGCGCC-------CCCAGC---GGG-CCCGGAGT--CCGGAGGATTAAGGCG--GGCGCGTC-C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159249 81 - 21531802 AGCAGGAA-GCG-CCCCCGACACA---CCAGCCCCGCTCTGCGCC-------CCCAGC---GGG--CCGGCGT--CGGGAGGGTTAAGGCG--GGCGCGTC-C i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 197238 84 - 2515279 AGCAGGAAGGCGCCCCCCCGCACA---CCAGCCCCTCTCTGAGCC-------CCCAGA---GGG-CCCGGAGT--CCGGAGGGTTAAGGCG--GGCGCGTC-C i manLeu1.NW_012101810v1 C 0 M 1565 s calJac3.chrUn_GL286444 86443 84 + 138751 AGCAGGGAGGCG-CCCCCAGCACA---CCAGACCCTCTCATGGCC-------CCCAGT---GCG-CCTGGCGCGCCAGGAGGGTTAAGTCG--GGCGCGTC-- i calJac3.chrUn_GL286444 I 2 C 0 s saiBol1.JH378296 399161 75 - 2409723 AGTAGGGAGGCG-CCCTCAGAACA---CCAAACCCTCTCATCGCC-------CCCA-------------GCGCGCCGGGAGGGTTAAGTCG--TGCGCGTC-- i saiBol1.JH378296 I 2 C 0 s cebCap1.NW_016107703v1 560901 84 - 2125214 AGTAGGGAGGTG-CCCCCAGCACA---CCAGACCCTCTCATCGCC-------CCCAGC---GTG-CCTGGTGCGGCCGGAGGGTTAAGTCG--GGCGCGTC-- i cebCap1.NW_016107703v1 I 66 C 0 s aotNan1.NW_018514293v1 153660 85 + 376347 AGCAGGGAGGCG-CCCCCAGCACG---CCAGACCCTCTCATCTCC-------CCCAGG---CCG-CCTGGCGCGCCGGGAGGGTTAAGTCG--GGCGCGTCC- i aotNan1.NW_018514293v1 I 45 I 36 s otoGar3.GL873611 2287141 98 - 8137123 AGCGAAGTGTCT-CCCCCAGCACATACCGGGTACCTCTCAGCGCCAAGCAGTCCCAGCTGTGGG-GCCGGCAC--CGCCAGGGTTAAGGCGCAGGCGTGTC-C i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I a score=157960.000000 s hg38.chr7_KI270899v1_alt 184290 59 + 190869 -CGCGGGTGGGCGGGGGGGGGGGGACGGGACCGGTGCCGGGAGCTCC-----GCTGCCCTGGCGT s panTro5.chr7_NW_015973580v1_random 59686 55 - 83720 -CGCGGGTGGGCAGGGGGGGG----TGGGACCGGTGCCGGGAGCTCC-----GCGGCCCTGGCGT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 573905 54 + 162613886 -CGCGGGTGGGCAGGGGGGG-----TGGGACCGGTGCCGGGAGCTCC-----GCGGCCCTGGCGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 145718 53 - 432965 -CGCGCGTGGGCAGCGGGGG-----TGCGACCCGTGCC-GGAGCTCC-----GCTGCCCTGGCGT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 207964 54 + 85365473 -CGCGGGTGGGCAGGTGGGG-----TGGGACCGGTGCCGGGAGCTCC-----GCTGCCCTGGCGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34055801 41 + 185818997 -CCCGGG------------------CGGGGCCGGTGCCGGGAGCTCC-----ACTGCCCTGGCGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33673794 41 + 192294377 -CCCGGG------------------CGGGGCCGGTGCCGGGAGCTCC-----ACTGCCCTGGCGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440037 41 - 9440265 -CCCGGG------------------CGGGGCCGGTGCCGGGAGCTCC-----ACTGCCCTGGCGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030399 41 - 21915920 -CCCGGG------------------CGGGGCCGGTGCCGGGAGCTCC-----ACTGCCCTGGCGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159330 41 - 21531802 -CCCGGG------------------CTGGGCCGGTGCCGGGAGCTCC-----AGGGCCCTGGCGT i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 86527 33 + 138751 -CGCGGG------------------TGG----G----TGGGGGCTCC-----GCCGCCCCGGGGG i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 399236 36 - 2409723 -CGCGGG------------------TGGGTGCG----TGGGGGCTCC-----GCCG-CCCGGGGC i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 560985 37 - 2125214 -CGCGGG------------------TGGGTGCG----TGGGGGCTCC-----GCCTCCCGGGGGG i cebCap1.NW_016107703v1 C 0 I 1 s otoGar3.GL873611 2287239 53 - 8137123 CCTTGGG-------CTGGGG-----TGGGGCCCGCGGGCAGGGCCCTCGCCGGCTGCTCTGGCGT i otoGar3.GL873611 C 0 I 2 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e aotNan1.NW_018514293v1 153745 36 + 376347 I a score=776668.000000 s hg38.chr7_KI270899v1_alt 184349 109 + 190869 CCCCTGGGTCCAGGCCCAG----TCGCTCCTTGGGCCTCTCTCGCGG---------------------GGCCGCCTCCGCCTCCTC------------CTTGCCGAGA--CGGGCGTGGGGCACGGGGTCGCCGCCCGGCGGGGAGCT s panTro5.chr7_NW_015973580v1_random 59741 109 - 83720 CCCCTGGGTCCAGGCCCAG----TCGCTCCTTGGGCCTCTCTCGCGG---------------------GGCCGCCTCCGCCTCCTC------------CTTGCCGAGA--CGGGCGTGGGGCACGGGGTCGCCGCCCGGCGGGGAGCT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 573959 108 + 162613886 CCCCTGGGTCCAGGCCCAG----TCGCTCCTTGGGCCTCTCTCGCGG---------------------GGCCGCCTCCGCCTCCTC------------CTTGCCGAGA--CGGGCGT-GGGCACGGGGTCGCCGCCCGGCGGGGAGCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 145771 107 - 432965 -CCCTGGGTCCAGGCCCAG----TCGCTCCTT-GGCCTCTCTCGCGG---------------------GGCCGCCTCCGCCTCCTC------------CTTGCCGAGA--CGGGCGTGGGGCACGGGGTCGCCGCCCGGCGGGGAGCT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 208018 109 + 85365473 CCCCTGGGTCCAGACCCAG----TCGCTCCTTGGGCCTCTCTCGCGG---------------------GGCCGCCTCCGCCTCCTC------------CTTGCAGAGA--CGGGCGTGGGGCACGGGGTCGCCGCCCGGCGGGGAACT i nomLeu3.chr20 C 0 M 100 s rheMac8.chr3 34055842 106 + 185818997 CCCCTGGGTCCGGGCCGAG----TCGCTCCCCGGG--TCTCCCGCGG---------------------GGCCGCCTCCGCCTCCT-------------CTTGCCGAGA--CGGGCGTGGGGCACGGGGTCGCCGCCCGGCGGGGAGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33673835 106 + 192294377 CCCCTGGGTCCGGGCCGAG----TCGCTCCCCGGG--TCTCCCGCGG---------------------GGCCGCCTCCGCCTCCT-------------CTTGCCGAGA--CGGGCGTGGGGCACGGGGTCGCCGCCCGGCGGGGAGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440078 106 - 9440265 CCCCTGGGTCCGGGCCGAG----TCGCTCCCCGGG--TCTCCCGCGG---------------------GGCCGCCTCCGCCTCCT-------------CTTGCCGAGA--CTGGCGTGGGGCACGGGGTCGCCGCCCGGCGGGGAGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030440 106 - 21915920 CCCCTGGGTCCGGGCCCAG----TCGCTCCCCGGG--TCTCCCGCGG---------------------GGCCGCCTCCGCCTCCT-------------CTTGCCGAGA--CGGGCGTGGGGCACGGGGTCGCCGCCCGGCGGGGAGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159371 106 - 21531802 CCCCTGGGTCCGGGCCCAG----TCGCTGCCCGGG--TCTCCCGCGG---------------------GGCCGTCTCCGCCTCCT-------------CCTGCCGAGA--CGGGCGTGGGGCACGGGGTCGCCGCCCGGCGGGGAGCT i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 86561 106 + 138751 CCCCTGGGTCTAGGCCCAG----TCGCTCCTCTGG--CCTCTACTGT---------------------GGCCGCCTCCGCCTCCTC------------CTGGCGGAGA--CGGGCGTGGGGCGC-GGGTCGCTGCCCGGCGGGGAGCT i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 399273 88 - 2409723 CCCCTGGATCTAGGCCCAG-------------------------TGC---------------------GGCCGCCTCCGCCTCCTC------------CTGGCCGAGA--CGGGGGTGGGGCGCGGGGTTGCTGCCCGGCGGGGAGCT i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 561023 107 - 2125214 CCCCTCGGTCTACGCCCAG----TCGCTCCTCTGG--CCTCTCCTGC---------------------GGCCGCCTCCGCCTCCTC------------CTGGCCGAGA--CGGGGGTGGGGCGCGGGGTCGCTGCCCGGCGGGGAGCT i cebCap1.NW_016107703v1 I 1 C 0 s aotNan1.NW_018514293v1 153781 107 + 376347 CCCCTGGGTCTAGGCCCAG----ccgctccgccgg--cctctcctgc---------------------agccgcctccgcctcctc------------ctGGCCGAGA--CGGGCGTGGGGCGCGGGGTCGCTGCCCGGCGGGGAGCT i aotNan1.NW_018514293v1 I 36 C 0 s otoGar3.GL873611 2287294 148 - 8137123 CCTCTGGCTTTGGGCCCGGAGACCCACTCCTCTGGCCCCTCCCGCGGCGGCAGGAGCCCGGTTGTCTTTGCCGCCTCCTCTTCCTCGCCCGCTGAGGGGCCGCCGAGACCCGGCCGCGGGGCACAAGGTCGCCTCTCGGCGGGGAGCT i otoGar3.GL873611 I 2 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 197322 1565 - 2515279 M a score=373060.000000 s hg38.chr7_KI270899v1_alt 184458 45 + 190869 CATCCGGCGGCGCAGACGCCCCGCGGCTCCGGGGAGGGACTTGGC s panTro5.chr7_NW_015973580v1_random 59850 45 - 83720 CATCCGGCGGCGCAGACGCCCCGCGGCTCCGGGGAGGGACTTGGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 574067 45 + 162613886 CATCCGGCGGCGCAGACGCCCCGCGGCTCCGGGGAGGGACTTGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 145878 44 - 432965 CATCCGGCGGCGCAGACGCCCCGCGGCTCC-GGGAGGGACTTGGC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34055948 45 + 185818997 CATCCGGCGGCGCAGACGCCCCGCGGCTCCAGGGAGGGACTTGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33673941 45 + 192294377 CATCCGGCGGCGCAGACGCCCCGCGGCTCCAGGGAGGGACTTGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440184 45 - 9440265 CATCCGGCGGCGCAGACGCCCCGCGGCTCCAGGGAGGGACTTGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030546 45 - 21915920 CATCCGGCGGCGCAGACGCCCCGCGGCTCTGGGGAGGGACTTGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159477 45 - 21531802 CATCCGGCGGCGCAGACGCCCCGCGGCTCCGGGGAGGGACTTGGC i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 86667 45 + 138751 CATCCGGCGGCGCAGACGCCCAGCGGCTCTGGGGAGGGACTTGGC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 399361 45 - 2409723 CATCCGGCGGCGCAGACGCCCAGCGGCTCCTGGGAGGGACTTGGC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 561130 45 - 2125214 CATCCGGCGGCGCAGACGCCCAGCGGCTCCTGGGAGGGACTTGGC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 153888 45 + 376347 CATCCGGCGGCGCAGACGCCCAGCGGCTCCTGGGAGGGACTTGGC i aotNan1.NW_018514293v1 C 0 I 324 s otoGar3.GL873611 2287442 45 - 8137123 CATCCGGCGGCGCAGACGCCCAGCGGCTCCGGGGAGGGACTTGGC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e nomLeu3.chr20 208127 100 + 85365473 M a score=27148.000000 s hg38.chr7_KI270899v1_alt 184503 5 + 190869 CTGGG s panTro5.chr7_NW_015973580v1_random 59895 5 - 83720 CTGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 574112 5 + 162613886 CTGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 145922 5 - 432965 CTGGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34055993 5 + 185818997 CCGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33673986 5 + 192294377 CCGGG i macFas5.chr3 C 0 M 100 s macNem1.NW_012019910v1 4440229 5 - 9440265 CCGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030591 5 - 21915920 CCGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159522 5 - 21531802 CCGGG i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 86712 4 + 138751 CTGG- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 399406 5 - 2409723 CTGGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 561175 5 - 2125214 CTGGG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2287487 5 - 8137123 CTGGG i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e aotNan1.NW_018514293v1 153933 324 + 376347 I e nomLeu3.chr20 208127 100 + 85365473 M a score=3600.000000 s hg38.chr7_KI270899v1_alt 184508 1 + 190869 C s panTro5.chr7_NW_015973580v1_random 59900 1 - 83720 C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 574117 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 145927 1 - 432965 C i gorGor5.CYUI01015914v1 C 0 C 0 s macNem1.NW_012019910v1 4440234 1 - 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030596 1 - 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s saiBol1.JH378296 399411 1 - 2409723 C i saiBol1.JH378296 C 0 M 1558 s cebCap1.NW_016107703v1 561180 1 - 2125214 C i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2287492 1 - 8137123 C i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e chlSab2.chr28 159527 0 - 21531802 C e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e macFas5.chr3 33673991 100 + 192294377 M e rheMac8.chr3 34055998 0 + 185818997 C e aotNan1.NW_018514293v1 153933 324 + 376347 I e calJac3.chrUn_GL286444 86716 0 + 138751 C e nomLeu3.chr20 208127 100 + 85365473 M a score=15278.000000 s hg38.chr7_KI270899v1_alt 184509 9 + 190869 -CCCGGCCCC s panTro5.chr7_NW_015973580v1_random 59901 9 - 83720 -CCCGGCCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 574118 9 + 162613886 -CCCGGCCCC i panPan2.chr7 C 0 M 1503 s gorGor5.CYUI01015914v1 145928 9 - 432965 -CCGGTCCCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34055998 9 + 185818997 -CCCGGCCCC i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440235 9 - 9440265 -CCCGGCCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030597 9 - 21915920 -CCCGGCCCC i cerAty1.NW_012002954v1 C 0 C 0 s cebCap1.NW_016107703v1 561181 8 - 2125214 -TCCCGCCC- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2287493 9 - 8137123 TCTTGGCCT- i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e chlSab2.chr28 159527 0 - 21531802 C e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e macFas5.chr3 33673991 100 + 192294377 M e aotNan1.NW_018514293v1 153933 324 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86716 0 + 138751 C e nomLeu3.chr20 208127 100 + 85365473 M a score=194246.000000 s hg38.chr7_KI270899v1_alt 184518 54 + 190869 GCGCTCCTCTGGGGAGGAGCCGAGAGGCTGCAGCTGGCGGCGGCGGC------CCCGGGC s panTro5.chr7_NW_015973580v1_random 59910 60 - 83720 GCGCTCCTCTGGGGAGGAGCCGAGAggctgcagctggcggcggcggcggcggccccgggc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 145937 60 - 432965 GCGCTCCTCTGGGGAGGAGCCGAGAggctgcagctggcggcggcggcggcggccccgggc i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056007 57 + 185818997 GGGCTCCTCCGGGGAGGAGCCGAGAggctgcagctggcggcggcggc---ggcCCTGGGC i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440244 57 - 9440265 GGGCTCCTCCGGGGAGGAGCCGAGAggctgcagctggcggcggcggc---ggcCCTGGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030606 57 - 21915920 GGGCTCCTCCGGGGAGGAGCCGAGAGGCTGCAGCTGGCGGCCGCGGC---GGCCCTGGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159527 54 - 21531802 ---CCCCTCCGGGGAGGAGCCGAGAggctgcagctggcggcggcggc---ggcCCTGGGC i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 86716 55 + 138751 --GCTCCTCAGGGGAGGGGCCGAGAGGCTGCAGCTGGCGGCGGCGGC---GGCCCCTGGC i calJac3.chrUn_GL286444 C 0 I 2 s cebCap1.NW_016107703v1 561189 56 - 2125214 GGGCTCCTCAAGGGAGGGGCCGAGAGGCTGCAGCTGGCggcggc-gc---ggcccctggc i cebCap1.NW_016107703v1 C 0 I 2 s otoGar3.GL873611 2287502 55 - 8137123 CGGCTCATCTGGGGAGGAGCCGAGAAGCTGCAGCTGGCGGCGGC--C---GGCACTGGGC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e macFas5.chr3 33673991 100 + 192294377 M e aotNan1.NW_018514293v1 153933 324 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=614274.000000 s hg38.chr7_KI270899v1_alt 184572 176 + 190869 GGGAGGGGGTCC--CAGGAAGCGG-----------------------------CCAGGCCGGAGCCCCCCACTCGGCCG---------------CAGCTGCTGGCCTG--GCCAGAACCGAGCGCGC---C------------CT--CCC--------------------GGTCTCCGCCGCTTCCCTCTGCAAACCGCGGGCAGGAGGAGCCCTCTCCTTAGCGGGCCCGGAGCT-CAGAGGCGTCGCGGGGCGCGGCCGA s panTro5.chr7_NW_015973580v1_random 59970 177 - 83720 ggGAGGGGGTCC--CAGGAAGCGG-----------------------------CCAGGCCGGAGCCCCCCACTCGGCCG---------------CAGCTGCTGGCCTG--GCCAGAACCGAGCGCGC---C------------CT--CCC--------------------GGTCTCCGCCGCCTCCCTCTGCAAACCGCGGGCAGGAGGAGCCCTCTCCTTAGCGGGCCCGGAGCTGCAGAGGCGTCGCGGGGCGCGGCCGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 145997 176 - 432965 ggGAGGGGGTCC--CAGGAAGCGG-----------------------------CCAGGCCGGAG-CCCCCACTCGGCCG---------------CAGCTGCCGGCCTG--GCCAGAACCGAGCGCGC---C------------CT--CCC--------------------GGTCTCCGCCGCTTCCCTCTGCAAACCGCGGGCAGGAGGAGCCCTCTCCTTAGCGGGCCCGGAGCTGCAGAGGCGTCGCGGGGCGCGGCCGA i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056064 178 + 185818997 GGGCGGGGGTCC--CGGGAAGCGG-----------------------------CCAGGCCGGAGCCCCCCTCTGGGACG---------------CAGCTGCTGGCCCG--GCCGGAACCGAGCGCGC---C------------CCCACCC--------------------GGCCTCCGCCGCTTCCCTCTGCAAACCGCGGGCCGGAGGCGCCCTC-CCTCAGCGGGCCCGGAGCTGCAGCGGCGTCGCGGGGCGCGGCCGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33674091 178 + 192294377 GGGCGGGGGTCC--CGGGAAGCGG-----------------------------CCAGGCCGGAGCCCCCCACTGGGCCG---------------CAGCTGCTGGCCCG--GCCGGAACCGAGCGCGC---C------------CCCACCC--------------------GGCCTCCGCCGCTTCCCTCTGCAAACCGCGGGCCGGAGGCGCCCTC-CCTCAGCGGGCCCGGAGCTGCAGCGGCGTCGCGGGGCGCGGCCGA i macFas5.chr3 M 100 C 0 s macNem1.NW_012019910v1 4440301 178 - 9440265 GGGCGGGGGTCC--CGGGAAGCGG-----------------------------CCAGGCCGGAGCCCCCCACTGGGCCG---------------CAGCTGCTGGCCCG--GCCGGAACCGAGCGCGC---C------------CCCACCC--------------------GGCCTCCGCCGCTTCCCTCTGCAAACCGCGGGCCGGAGGCGCCCTC-CCTCAGCGGGCCCGGAGCTGCAGCGGCGTCGCGGGGCGCGGCCGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030663 178 - 21915920 GGGCGGGGGTCC--CGGGAAGCGG-----------------------------CCAGGCCGGAGCCCCCCACTGGGCCG---------------CAGCTGCTGGCCCG--GCCGGAACCGAGCGCGC---C------------CCCACCC--------------------GGCCTCCGCCGCTTCCCTCTGCAAACCGCGGGCCGGAGGCGCCCTC-CCTCAGCGGGCCCGGAGCTGCAGCGGCGTCGCGGGGCGCGGCCGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159581 174 - 21531802 --GGGGGGGTCC--CGGGAAGCGG-----------------------------CCAGGCCGGAGCCCCCCACTGGGCCG---------------CAGCTGCTCGCCCG--GCCGGAACCGAGCGCGG---C------------CCC-CCC--------------------GGCCTCCGCCGCTTCCCTCTGCAAACCGCGGGCCGCAGGCG-CCTC-CCTCAGCGCGCCCGGAGCTGCAGAGGCGTCGCGGGGCGCGGCCGA i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 86773 216 + 138751 GGAAGGCGGTCC--CGGGGCGGGGAAGGGGGTCCCTGGGCGGAGAAAGGGGTCCCAGGCCGGAGCGCCCCTCTCCGCCG---------------CAGCCGCCTGCATG--CCCAGACCCGGACACGC---C------CAGCCGCCCGCCC-----------------CCGGGTCTCCGCCGCTGTTCCCTGCTAAGCGCGGGAGGCAGGAGCCCTCTCCTTAGCCCGTCATGAGCTGCAT-GTCCACGAGGGGCGCGGCCGA i calJac3.chrUn_GL286444 I 2 M 1088 s cebCap1.NW_016107703v1 561247 223 - 2125214 ggaaggcggtcc--cggggcggggaagggcgtcccggggcggggAAAGGGGTCCCAGGCCGGAGCGCCCCTCTCTGCTG---------------CAGCCGCTTGCATG--CCCAGACCCGcgcgcgc---ccccccgcccccgcccgccc-----------------gcAGGTCCCTGCCAATGTTCTCTGCAAAGCGCGGGAAGAAGGCGCCCTCTCCTTAGCGAGCCAGGAGCTGCAGAGACGTCGCGGGGCGCGGCCGA i cebCap1.NW_016107703v1 I 2 C 0 s otoGar3.GL873611 2287557 219 - 8137123 GGGCGGCGGTCCGTAGAGGAGCGG-----------------------------CCAGGCCAGAGAGCCCTTCTTGGCAGGGCCCGCAACGCCGCTAGCTGCTCGCCTGCCGCAGGAgccgggggcgcgggc------------ccggcgcTCTCTTGTCTTTCTTTCTCGGGTCTCTGCTGCTT--CTTTGCAAACCACGGGAAGAAGGCGCCCTCTCCTTAGCGGGCCGGGAGCTGCAGAGGCATCGCGGGGCGCGGCCGA i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e aotNan1.NW_018514293v1 153933 324 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=91898.000000 s hg38.chr7_KI270899v1_alt 184748 35 + 190869 GGGGAGGAGGAAGGAGAGCGGGAGCGCAGCCGGCC s panTro5.chr7_NW_015973580v1_random 60147 19 - 83720 GGGGAGGA---AGGAGAGCGGG------------- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146173 35 - 432965 GGGGAGGAGGAAGGAGAGCGGGAGCGCAGCCGGCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056242 34 + 185818997 GGGGAGGAGGAAGGAGAGCGCA-GCGCAGCCGGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33674269 34 + 192294377 GGGGAGGAGGAAGGAGAGCGCA-GCGCAGCCGGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440479 34 - 9440265 GGGGAGGAGGAAGGAGAGCGCA-GCGCAGCCGGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030841 34 - 21915920 GGGGAGGAGGAAGGAGAGCGCA-GCGCAGCCGGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159755 34 - 21531802 GGGGAGGAGGAGGGAGAGCGCA-GCGCAGCCGGCC i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 561470 31 - 2125214 -GGGAGGAGGAAGGAGG--GGA-GCGCCGCCGGCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2287776 35 - 8137123 TGGGAGGAGAAAGGAGAGAGGGAGCGGAGCCGGCC i otoGar3.GL873611 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e canFam3.chr6 61074004 2046 - 77573801 I e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e aotNan1.NW_018514293v1 153933 324 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86989 1088 + 138751 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=25215.000000 s hg38.chr7_KI270899v1_alt 184783 7 + 190869 CGGGCCC s panTro5.chr7_NW_015973580v1_random 60166 4 - 83720 ---GCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146208 6 - 432965 GG-GCCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056276 7 + 185818997 CGGGCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33674303 7 + 192294377 CGGGCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440513 7 - 9440265 CGGGCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030875 7 - 21915920 CGGGCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159789 7 - 21531802 CGGGCCC i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 561501 7 - 2125214 CGGGCCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2287811 7 - 8137123 CGGGCCC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076050 7 - 77573801 CGGGTCT i canFam3.chr6 I 2046 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e aotNan1.NW_018514293v1 153933 324 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86989 1088 + 138751 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=311946.000000 s hg38.chr7_KI270899v1_alt 184790 54 + 190869 AGCCGTGACTCGTGGGGCGGCGGCTCCGCCAATCTGTGGGCGCTGACGCGGGGG s panTro5.chr7_NW_015973580v1_random 60170 54 - 83720 AGCCGTGACTCGTGGGGCGGCGGCTCCGCCAATCTGTGGGCGCTGACGCGGGGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146214 54 - 432965 AGCCGTGACTCGTGGGGCGGCGGCTCCGCCAATCTGTGGGCGCTGACGCGGGGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056283 54 + 185818997 AGCAGTGACTCGCGGGGCGGCGGCTCCGCCAATCTGCGGGCGCTGACGCGGGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33674310 54 + 192294377 AGCAGTGACTCGCGGGGCGGCGGCTCCGCCAATCTGCGGGCGCTGACGCGGGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440520 54 - 9440265 AGCAGTGACTCGCGGGGCGGCGGCTCCGCCAATCTGCGGGCGCTGACGCGGGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030882 54 - 21915920 AGCAGTGACTCGCGGGGCGGCGGCTCCGCCAATCTGCGGGCGCTGACGCGGGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159796 53 - 21531802 AGCCGTGACTC-CGGGGCGGCGGCTCCGCCAATCTGCGGGCGCTGACGCGGGGG i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 561508 54 - 2125214 AGCAGTGACTCGTGGGGCCGCGGCTCCGCCAATCTGTGGGCGCTGACGCGGGGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 154257 54 + 376347 AGCCGTGACTCGTGGGGCCGCGGCTCCGCCAATCTGTGGGCGCTGACGCGGGGG i aotNan1.NW_018514293v1 I 324 I 449 s otoGar3.GL873611 2287818 54 - 8137123 AGCCGTGACTCGCGGGGCTGCGGCTCCGCCAATCTGCGGGCGCTGACGCGGGGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076057 54 - 77573801 GGCCGTGACTTACGGGGCGGCGTCTCCCCCAATCTGCGGGCGCTGACGCGGGGG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86989 1088 + 138751 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=785087.000000 s hg38.chr7_KI270899v1_alt 184844 208 + 190869 GCGGCTCCGCGGCGCT-CGATATCTGCCCGCCCGGGACGCGGGGCGCCGAGAGGCTCGGCCAGGCGGGAGCTGCGCT-CGGGG--CGGCCGCTGCACCTGCCC-GGGACCCCGCCGGCCGCTCCCCGCGCCCAC---------------------------CCCTTCCG-------------------CCCTTCGCCCCCCCCTTCCCCCCAGCCCCGGTCTCCCGGGCGCGGCGTGAGA--GCAG--AGCCCGGCCCGGAGG s panTro5.chr7_NW_015973580v1_random 60224 208 - 83720 GCGGCTCCGCGGCGCT-CGATATCTGCCCGCCCGGGGCGCGGGGCGCCGAGAGGCTCGGCCAGGCGGGAGCTGCGCT-CGGGG--CGGCCGCTGCACCTGCCC-GGGACCCCGCCGGCCGCTCCCCGCGCCCAC---------------------------CCCTTCCG-------------------CCCTTCGCCCCCCCCTTCCCCCCAGCCCCGGTCTCTCGGGCGCGGCGTGAGA--GCAG--AGCCCGGCCCGGAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146268 207 - 432965 GCGGCTCCGCGGCGCT-GGATATCTGCCCGCCCGGGGCGCGGGGCGCCGAGAGGCTCGGCCAGGCGGGAGCTGCGCT-CGGGG--CGGCCGCTGCACCTGCCC-GGGACCCCGCCGGCCGCTCCCCGCGCCCAC---------------------------CCCTTCCG-------------------CCCTTCG-CCTCCCCTTCCCCCCAGCCCCGGTCTCCCGGGCGCGGCGTGAGA--GCAG--AGCCCGGCCCGGAGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056337 196 + 185818997 GCGGCTCCGCGGCGCT-CGATATCTGCCCGCCCGGGGCGCGGGGCGCCGAGAGGCTCGGCCAGGCGGGAGCTGCGCT-CGGGG--CGGACGCTGCACCTGCCC-GGGACCCCGCCGGCCGCT--CCGCGCCCA----------------------------CCCTTCCG-------------------CCCTTCG---------CCCTCCCAGCCCCGGTCTCCCGGGCGCGGCGTGAGG--GCAG--AGCCCGGCCCGGAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33674364 196 + 192294377 GCGGCTCCGCGGCGCT-CGATATCTGCCCGCCCGGGGCGCGGGGCGCCGAGAGGCTCGGCCAGGCGGGAGCTGCGCT-CGGGG--CGGACGCTGCACCTGCCC-GGGACCCCGCCGGCCGCT--CCGCGCCCA----------------------------CCCTTCCG-------------------CCCTTCG---------CCCTCCCAGCCCCGGTCTCCCGGGCGCGGCGTGAGG--GCAG--AGCCCGGCCCGGAGG i macFas5.chr3 C 0 M 100 s macNem1.NW_012019910v1 4440574 196 - 9440265 GCGGCTCCGCGGCGCT-CGATATCTGCCCGCCCGGGGCGCGGGGCGCCGAGAGGCTCGGCCAGGCGGGAGCTGCGCT-CGGGG--CGGACGCTGCACCTGCCC-GGGACCCTGCCGGCCGCT--CCGCGCCCA----------------------------CCCTTCCG-------------------CCCTTCG---------CCCTCCCAGCCCCGGTCTCCCGGGCGCGGCGTGAAG--GCAG--AGCCCGGCCCGGAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17030936 196 - 21915920 GCGGCTCCGCGGCGCT-CGATATCTGCCCGCCCAGGGCGCGGGGCGCCGAGAGGCTCGGCCAGGCGGGAGCTGCGCT-CGGGG--CGGACGCTGCACCTGCCC-GGGACCCCGCCGGCCGCT--CCGCGCCCA----------------------------CCCTTCCG-------------------CCCTTCG---------CCCTCCCAGCCCCGGTCTCCCGGGCGCGGCGTGAGA--GCAG--AGCCCGGCCCGGAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 159849 196 - 21531802 GCGGCTCCGCGGCGCT-CGATATCTGCCCGCCCGGGGCGCGGGGCGCCGAGAGGCTCGGCCAGGCGGGAGCTGCGCT-CGGGG--CGGCCGCTGCACCTGCCC-GGGACCCCGCTGGCCGCT--CCGCGCCCA----------------------------CCCTTCCG-------------------CCCTTCG---------CCCTCCCGGCCCCGGTCTCCCGGGCGCGGCGTGAGG--GCAG--AGCCCGGCCCGGAGG i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 561562 195 - 2125214 GCGGCTCCGCGGCGCTCCGATATCTGCCCGCCCGGGGCGTGGGGCGCT-AGAGCTTCGGCCGTGCGGGAGTTGCGCT-CGGGG--CAGCAGCTGCACCTGCCA-GGGACCC--CCGGccgcc-cccgcgcccac---------------------------ctcctccg-------------------ccctccg----------ccctccagccccggtgttccgggcgccgcgcGAGA--GCAG--AGCCCTGCCCGGAGG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2287872 222 - 8137123 GCGGCTCCGCGGTGCTGGGATATCTgcccgcccggggcgcggggcgcc--gAGGCTCGGCCGTGCAGGAACTGCGCTCCGGGA--CCGCCGTTGCACCTGCCTGGGGACCTCGCCGGCCGCC--CCGTGCGCC----------------------------CCCTCCCGCTCCTGCCCCTTGCTACGTCCCTTCG-----GCCTTTCACCTGGTCCCCATCTCCCGGCTACAGTGTGAAACCGCAG--AGCCCTGCCCGAAGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076111 237 - 77573801 GCGGCTCCGCGGCTCTCGGATATCTgccggccc-gggcgcggggcgccgagaggctccgccgggcgggcgcTGCGCT-CGGGGGACGGCCGCTGCACCTGCCT-GGGGACTccccggccgcc--ccgcgcgccccccgccctgtgcccgcccccgcccggtccccgccg-------------------tcctgcgcccggctccccccccaggtccccgcctccgGGCCGCCGCGGGAGG--GAGACCAGCCCTGCCCGGAGG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e aotNan1.NW_018514293v1 154311 449 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86989 1088 + 138751 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=89826.000000 s hg38.chr7_KI270899v1_alt 185052 40 + 190869 AGCCGCCCCTTCCCCGCCCGCCC---GCCCG--------------GCGCCTGGAGAG-------- s panTro5.chr7_NW_015973580v1_random 60432 48 - 83720 AGCCGCCCCTTCcccgcccgccc---gcccg------cccgcccgGCGCCTGGAGAG-------- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146475 44 - 432965 AGCCGCCCCTTCCCCGCCCGCCC---GCCCG----------CCCGGCGCCTGGAGAG-------- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056533 36 + 185818997 AGCCGCCCCTTC----CCCGCCC---GCCCG--------------GCGCCTGGAGCG-------- i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440770 36 - 9440265 AGCCGCCCCTTC----CCCGCCC---GCCCG--------------GCGCCTGGAGCG-------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17031132 40 - 21915920 AGCCGCCCCTTCCCCGCCCGCCC---GCCCG--------------GCGCCTGGAGCG-------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160045 40 - 21531802 AGCAGCCCCTTCCCCGCCCACCC---GCCCG--------------GCGCCTGGAGCG-------- i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 561757 40 - 2125214 AGACGCCCCTTCCCCGCCCGCCT---GCCCG--------------GCCCACGGAGCT-------- i cebCap1.NW_016107703v1 C 0 I 22 s otoGar3.GL873611 2288094 56 - 8137123 AGCTGCCCC-TCTCCGCCTGCCCAGAGCCCAGCGCGGCCCACGAAGCTCACGGAGAG-------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076348 44 - 77573801 AGCCGCCCCCTC----TCGGCCG---GGCCG--------------GCCCACGGAGCGGCGGAGGG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e macFas5.chr3 33674560 100 + 192294377 M e aotNan1.NW_018514293v1 154311 449 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86989 1088 + 138751 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=152377.000000 s hg38.chr7_KI270899v1_alt 185092 61 + 190869 GAGCGCGCTGAGGATCGGGACGCCT---GCGGCCGCCGCCACCG-CCCAGGCCCGTCGCGCCCCG s panTro5.chr7_NW_015973580v1_random 60480 61 - 83720 GAGCGCGCTGAGGATCGGGTCGCCT---GCGGCCGCCGCCACCG-CCCAGGCCCGTCGCGCCCCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146519 61 - 432965 GAGCGCGCTGAGGATCGGGTCGCCT---GCGGCCGCCGCCACCG-CCCAGGCCCGTCGCGCCCCG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056569 61 + 185818997 GACCGCGCTGAGGATCGGGTCGCCT---GCGGCCGCCGCCACCG-CCGAGGCCCGTCGCGCCCCG i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440806 61 - 9440265 GACCGCGCTGAGGATCGGGTCGCCT---GCGGCCGCCGCCACCG-CCCAGGCCCGTCGCGCCCCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17031172 61 - 21915920 GACCGCGCTGAGGATCGGGTCGCCT---GCGGCCGCCGCCACCG-CCCAGGCCCGTCGCGCCCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160085 61 - 21531802 GACCGCGCTGAGGATCGGGTcgcct---gcggccgccgccaccg-cccgggcccgtcgcgccccg i chlSab2.chr28 C 0 C 0 s otoGar3.GL873611 2288150 65 - 8137123 GATCGAGCTGTGGATTGGATCGCCTCGCGCAGCCGCTGCCACTGTCCCCGGCCAGTCGCGCCCCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076392 47 - 77573801 GACTGCGCGGAG-------CCATCT--------CACCGCCACC--CCCAGGCC-GCCGCGCCCTG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e macFas5.chr3 33674560 100 + 192294377 M e aotNan1.NW_018514293v1 154311 449 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e cebCap1.NW_016107703v1 561797 22 - 2125214 I e calJac3.chrUn_GL286444 86989 1088 + 138751 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=194913.000000 s hg38.chr7_KI270899v1_alt 185153 91 + 190869 GCCGGGATGGA---------------CCCACACGCCCGATGAGC-------------------CCCGCGCCGGCGGCTGCGAGCGCCGAGCCTCCCCCTGCTGCGGCCCCAGCCGCCCCCCGCGC s panTro5.chr7_NW_015973580v1_random 60541 91 - 83720 GCCGGGATGGA---------------CCCACACGCCCGATGAGC-------------------CCCGCGCCGGCGGCTGCGAGCGCCGAGCCTCCCCCTGCTGCGGCCCCAGCCGCCCCCCGCGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146580 90 - 432965 GCCGGGATGGA---------------CCCACACGCCCGATGAGC-------------------CCCGCGCCGGCGGCTGCGAGCGCGGAGTCTCCCCCTGCTGCGGCCCCCGCCG-CCCCCGAGC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056630 91 + 185818997 GCCGGGATGGA---------------CCCGCGCGCCCGATGAGC-------------------CCCGCGCCGGCCGCTGCGAGCGCCGAGCCTCCCCCTGCTGCGGCCCCCGCCGCCCCCCGCGC i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440867 91 - 9440265 GCCGGGATGGA---------------CCCGCGCGCCCGATGAGC-------------------CCCGCGCCGGCCGCTGCGAGCGCCGAGCCTCCCCCTGCTGCGGCCCCCGCCGCCCCCCGCGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17031233 91 - 21915920 GCCGGGATGGA---------------CCCGCGCGCCCGATGAGC-------------------CCCGCGCCGGCCGCTGCGAGCGCCGAGCCACCCCCTGCTGCGGCCCCCGCCGCCCCCCGCGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160146 47 - 21531802 gccgGGATGGA---------------CCCGCGCGCCCGATGAGC-------------------CCCGCGCCNNNNNNNNNN-------------------------------------------- i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 561819 91 - 2125214 ACCCGGATGGA---------------CCCGCGCGCCCGATGAgc-------------------cccgcgccggccgctgcgagcgccgagcctccccccgccgcggcccccgccgccccccgcgc i cebCap1.NW_016107703v1 I 22 C 0 s otoGar3.GL873611 2288215 113 - 8137123 ACGGGGATGGGACGCTGTGTCGGGCCCCCGGGCGCCTGATGAGCGTGGCCGCAGCCCGGGACACCCGCGCTGACCGCTCTGTTCGCGGGACCTCACCCGGTTGC------------TCCTTGCAC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076439 95 - 77573801 GCCTAGATGGGCCGCAGCGTCGGGCCCCCGCGCGCCGGATGAGCGCAGAGAC-----------CCCAAGCCGGCCGCTGCGTGCGTGCGGCCTCGCCGGGCTGCGC------------------- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e macFas5.chr3 33674560 100 + 192294377 M e aotNan1.NW_018514293v1 154311 449 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86989 1088 + 138751 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=127870.000000 s hg38.chr7_KI270899v1_alt 185244 35 + 190869 GCCCGGCTCCGCGGACCAGGACCCCTGGGCTCCCC s panTro5.chr7_NW_015973580v1_random 60632 35 - 83720 GCCCGGCTCCGCGGACCAGGACCCCTGGGCTCCCC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146670 35 - 432965 GCCCGGCCCCGCGGACCAGGACCCCTGGGCTCCCC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34056721 35 + 185818997 GCCCGGCCCCGCGGACCAGGACCCCTGCGCTCCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33674660 35 + 192294377 GCCCGGCCCCGCGGACCAGGACCCCTGCGCTCCCC i macFas5.chr3 M 100 C 0 s macNem1.NW_012019910v1 4440958 35 - 9440265 GCCCGGCCCCGCGGACCAGGACCCCTGCGCTCCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17031324 35 - 21915920 GCCCAGCCCCGCGGACCAGGACCCCTGCGCTCCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160193 27 - 21531802 --------CCGCGGACCAGGACCCCTGCGCTCCCC i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 561910 35 - 2125214 gccCAGATCCGCGGAACAGGGCCCACGGGCTCCCC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2288328 35 - 8137123 TTCCAGCTCCGTGGAGCAGGGCAAGTGGGCCCGGC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076534 35 - 77573801 ACCCAGCTCCGCGGACGAgggccgctgggcccggc i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e aotNan1.NW_018514293v1 154311 449 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86989 1088 + 138751 M e nomLeu3.chr20 208127 100 + 85365473 M e panPan2.chr7 574127 1503 + 162613886 M a score=692512.000000 s hg38.chr7_KI270899v1_alt 185279 128 + 190869 GGCTGAGGGCGCGGCCGCTCCGGAGAGGCCGAGCGGGGACGG-GCCCGAGATGGCGCGGGGACCCAGCGCTCCGGCGGCGGGCGCCCTGCACGCGGCCCGGGCCCGGGGACAGCCCCGGAGCTGGTAGC s panTro5.chr7_NW_015973580v1_random 60667 128 - 83720 GGCTGAGGGCGCGGCCGCTCCGGAGAGGCCGAGCGGGGACGG-GCCCGAGATGGCGCGGGGACCCAGCGCTTTGGCGGCGGGCGCCCTGCACGCGGCCCGGGCCCGGGGACAGCCCCGGAGCTGGTAGC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146705 128 - 432965 GGCTGAGGGCGCGGCCGCTCCGGAGAGGCCGAGCGGGGACGG-CCCCGAGATGGCGCGGGGACCCAGCGCTTTGGCGGCGGGCGCCCTGCACGCGGCCCGGGCCCGGGGACAGCCCCGGAGCTGGTAGC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 208230 128 + 85365473 GGCTGAGGGCGCGGCCGCTCCGGAGAGGCCGAGCGGGGACGG-CCCCGAGATGGCGCGGGGACCCAGCGCTTTGGCGGCGGGCGCCCTGCACGCGGTCCGGGCCCGGGGACAGCCCCGGAGCTGGTAGC i nomLeu3.chr20 M 100 C 0 s rheMac8.chr3 34056756 128 + 185818997 GGCTGAAGGCGCGGCCGCTCCGGAGAGGCCGAGCGGGGACGG-CCCCGAGATGGCGCGGGGACCCAGCGCTTTGGCGGCGGGCGCCCTGCACGCGGTCCGGGCCCGGGCACAGCCCCGGAGCTGGTAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33674695 128 + 192294377 GGCTGAAGGCGCGGCCGCTCCGGAGAGGCCGAGCGGGGACGG-CCCCGAGATGGCGCGGGGACCCAGCGCTTTGGCGGCGGGCGCCCTGCACGCGGTCCGGGCCCGGGCACAGCCCCGGAGCTGGTAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4440993 128 - 9440265 GGCTGAGGGCGCGGCCGCTCCGGAGAGGCCGAGCGGGGACGG-CCCCGAGATGGCGCGGGGACCCAGCGCTTTGGCGGCGGGCGCCCTGCACGCGGTCTGGGCCCGGGCACAGCCCCGGAGCTGGTAGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17031359 128 - 21915920 GGCTGAGGGCGCGGCCGCTCCGGAGAGGCCGAGCGGGGACGG-CCCCGAGATGGCGCGGGGACCCAGCGCTTTGGCGGCGGGCGCCCTGCACGCGGTCCGGGCCCGGGCACAGCCCCGGAGCTGGTAGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160220 128 - 21531802 GGCTGAGGGCGCGGCCGCTCCGGAGAGGCCGAGGGGGGACGG-CCCCGAGATGGCGCGGGGACCCAGCGCTTTGGCGGCGGGCGCCCTGCACGCGGTCCGGGCCCGGGCACAGCCCCGGAGCTGGTAGC i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 561945 128 - 2125214 GGCTGAGGGCGCGGCCGCTCCGGAGAGGCCGAGCGGGGACAG-CCCCGGGATGGCGCGGGAAGCCGGCGCCTCGGCGGCGGGCGCCCCGCACGTCGTCCGGGCCCGGTGACAGTCCCGGAGCTGGTAGC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2288363 128 - 8137123 CGCTGAAGGCGCGGCCGCGCGGGAGAGACTGAGAGGGAACGG-TCCGGAGATGGACCCAAGAGCCGGCGCTTCGGTGGCAGGCGCCCTACACGTTGTGCGGGCCCAGGGACAGCCCTGGAGCTGGTAGC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076569 127 - 77573801 cgccgagggcgcggccgcTCCGGGGAGGC-GAGGGGGAACGGCCCCCGAGATGGCCCGGCGAGCGGGCTCTTCGGCGGTGGGCGCCCCACACGTGGTGCGCG-CCGGAAACAGCCCTGGAGCTGGTAGC i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e aotNan1.NW_018514293v1 154311 449 + 376347 I e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86989 1088 + 138751 M e panPan2.chr7 574127 1503 + 162613886 M a score=618058.000000 s hg38.chr7_KI270899v1_alt 185407 121 + 190869 CGCCC-GGCACC-GATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCTGCAG-CTAGAGGG-GCGCGCGGGCAGAACGCGCTCCAGG--------------CC--------CGGGCCG-----GCCCGCGCGGCCATGAAGAT s panTro5.chr7_NW_015973580v1_random 60795 121 - 83720 CGCCC-GGCACC-GATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCTGCAG-CTAGAGGG-GCGCGCGGGCAGAACGCGCTCCAGG--------------CC--------CGGGCCG-----GCCCGCGCGGCCATGAAGAT i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146833 121 - 432965 CGCCC-GGCACC-GATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCTGCAG-CTAGAGGG-GCGAGCGGGCAGAACGCGCTCCAGG--------------CC--------CGGGCCG-----GCCCGCGCGGCCATGAAGAT i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 208358 119 + 85365473 CGCCC-GGCACC-GATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCCTGCCCAGCTGCAG-CTAGAGGG-GC--GCGGGCAGAACGCGCTCCAGG--------------CC--------CGGGCCG-----GCCCGCGCGGCCATGAAGAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34056884 118 + 185818997 CGCCC-GGCGCC-GATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCCGCAG-CTAGAGGG-GC--GCGAGGGGAACGCGCTCCAGG--------------CC--------CGGGCCG-----G-CCGCGCGGCCATGAAGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33674823 118 + 192294377 CGCCC-GGCGCC-GATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCCGCAG-CTAGAGGG-GC--GCGAGGGGAACGCGCTCCAGG--------------CC--------CGGGCCG-----G-CCGCGCGGCCATGAAGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4441121 118 - 9440265 CGCCC-GGCGCC-GATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCCGCAG-CTAGAGGG-GC--GCGAGGGGAACGCGCTCCAGG--------------CC--------CGGGCCG-----G-CCGCGCGGCCATGAAAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17031487 118 - 21915920 CGCCC-GGCGCC-GATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCCTGCCCAGCCGCAG-CTAGAGGG-GC--GCGAGGGGAACGCGCTCCAGG--------------CC--------CGGGCCG-----G-CCGCGCGGCCATGAAGAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160348 118 - 21531802 CGCCC-GGCGCC-CATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCCGCAG-CTAGAGGG-GC--GCGAGGGGAACGCGCTCCAGG--------------CC--------CGGGCCG-----G-CCGCGCGGCCATGAAGAT i chlSab2.chr28 C 0 C 0 s cebCap1.NW_016107703v1 562073 127 - 2125214 CGCCC-GGCGCC-GATGGACCTTGACCCGCGAGGCGGCGCCGCGCTCGTGCCCAGCTGCAG-CTAGAGGG-GC--GCGGGCGGAACGCGCTCTAGG--------------CCCGGGAGCGCCAGCCC-----GCTTGCGCGGCCGCGAAGAT i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 154760 126 + 376347 CGCCC-GGCGCC-GATGGACCTTGACCCGCGAGGCCGCGCCGCGCTCGTGCCCAGCTGCCGCCTAGAGGGCGC--GCGGCGGGCACGCGCTCTAGC--------------CC---GACCGCCAGCCC-----GCGCGCGCGGCCGCGAAGAT i aotNan1.NW_018514293v1 I 449 C 0 s otoGar3.GL873611 2288491 138 - 8137123 TGCCTGGGCGCCGGATGGACCTTGACCTGCGAGGCAGCGCCGCGTTCGTGCCGAGCCGAAG-CTAGAGGG-GC--GCGGGTAGAGAGTGCTGTAGGA-GGCTCCCGGAGCCC--------CAGGCCCCA-TTGCCTGCGCGGCTATGAAGAT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076696 135 - 77573801 CGGCC-GCCGCCAGATGAAAA--AACCGGC--CTCGGCAGTGCGTTCGTGCCAAGCCCCCA-TTAgccgg-gg--ccgggcggagcgcgccccgggAGGGCTCCCGGAGTCC--------CAGGCGGCGCTCGCCCGCGCGGCCATGAAGAT i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e saiBol1.JH378296 399412 1558 - 2409723 M e calJac3.chrUn_GL286444 86989 1088 + 138751 M e panPan2.chr7 574127 1503 + 162613886 M a score=2393982.000000 s hg38.chr7_KI270899v1_alt 185528 317 + 190869 GATGCTGGTGCGCCGGTTCCGCGTGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCAGGCTGGAGCGACGCGGCGCGCGGCCCTCGGGGGAGCCCGGCTGTTCGTGCGCGCAGCCCGCCGCCGAGGTGGCCGCGCCCGGCTGGGCCCAGGTTCGGGgccgccccggggagcccccggccgcctcctccgccgccggcgacgcGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA s panTro5.chr7_NW_015973580v1_random 60916 317 - 83720 GATCCTGGTGCGCCGGTTCCGCGTGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCAGGCTGGAGCGACGCGGCGCGCGGCCCTCGGGGGAGCCCGGCTGTTCGTGCGCGCAGCCCGCCGCCGAGGTGGCCGCGCCCGGCTGGGCCCAGGTTCGGGgccgccccggggagcccccggccgcctcctccgccgccggcgacgcGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s gorGor5.CYUI01015914v1 146954 317 - 432965 GATCCTGGTGCGCCGGTTCCGCGTGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCAGGCTGGAGCGACGCGGCGCGCGGCCCTCGGGGGAGCCCGGCTGTTCGTGCGCGCAGCCCGCCGCCGAGGTGGCCGCGCCCGGCTGGGCCCAGGTTCGAGgccgccccggggagcccccggccgcctcctccgccgccggcgacgcGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 208477 317 + 85365473 GGTCCTGGTGCGCCGGTTCCGCGTGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCAGGCTGGAGCGACGCGGCGCGCGGCCCTCAGGGGAGCCCGGCTGTTCGTGCGCGCAGCCCGCCGCCGAGGTGGCCGCGCCCGGCTGGGCCCAGGTTCGGGgccgccccggggagcccccggccgcctcctccgccgccggcgacgcGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34057002 317 + 185818997 GATACTGGTGCGCCGGTTCCGCGTGCTCATCCTCATGGTCTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCCGGCTGGAGCGGCACGGCGCGCGGCCCTCGGGGGAGCCCGGCTGTTCGTGCGCGCAGCCCGCGGCCGAGGTGGCCGCGCCCGGCTGGGCCCAGGTTCGGGgccgccccggggagcccccagccgcctcctccgccgccgccgATGCGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33674941 317 + 192294377 GATCCTGGTGCGCCGGTTCCGCGTGCTCATCCTCATGGTCTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCCGGCTGGAGCGGCACGGCGCGCGGCCCTCGGGGGAGCCCGGCTGTTCGTGCGCGCAGCCCGCGGCCGAGGTGGCCGCGCCCGGCTGGGCCCAGGTTCGGGgccgccccggggagcccccagccgcctcctccgccgccgccgacgcGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4441239 317 - 9440265 GATCCTGGTGCGCCGGTTCCGCGTGCTCATCCTCATGGTCTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCCGGCTGGAGCGgcgcggcgcgcggccctcgggggagcccggctgttcgtgcgcgcagcccgcggccgaggtggccgcgcccggcTGGGCCCAGGTTCGGGgccgccccggggagcccccagccgcctcctccgccgccgccgacgcGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17031605 317 - 21915920 GATCCTGGTGCGCCGGTTCCGCGTGCTCATCCTCATGGTCTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCCGGCTGGAGAGgcgcggcgcgcggccctcgggggagcccggctgttcgtgcgcgcagcccgcggccgaggtggccgcgcccggcTGGGCCCAGGTTCGGGgccgccccggggagcccccagccgcctcctccgccgccgccgacgcGGGCTGGCCCAACAAGCACACGCTCCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160466 317 - 21531802 GATCCTGGTTCGCCGGTTCCGCGTGCTCATCCTCATGGTCTTCCTGGTGGCCTGCGCGCTGCACATCGCCCTGGACCTGCTGCCCAGGCTGGAGCGGCGCGGCGCGCGGCCCTCGGGGGAGCCCGGCTGTTCGTGCGCGCAGCCCGCCGCCGAGGTGGCCGCGCCCGGCTGGGCCCAGGTTCGGGgccgccccggggagcccccggccgcctcctccgccgccgccgacgcGGGCTGGCCCAACAAGCACACGCTGCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 88089 316 + 138751 GATCCTAGTGCGCCGGTTCTGCGAGCTCAT-AGGAGGGTGATCCAGGTGCCCTGCGCGAAGCACATCGCGCTGGACGTGCTTCCCAGGCTGGAGCGGCGGGGCGCGCGGCCTTCGGGGGAGCCCGGCTGCTCGTGCGCGCAGCCCGCCGGAGAAGTGGCCGCGCCCGGCTGGGCCCAGATTCGGGGCCGCCCCGGGGAGCCCCCCGCCTCCGCCTCTGCCGCCTCCGCCGCGGGCTGGCCCAACAAGCACACGCTGCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTAGAGA i calJac3.chrUn_GL286444 M 1088 C 0 s cebCap1.NW_016107703v1 562200 317 - 2125214 GATCCTGGTGCGCCGGTTCCGCGTGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCACATCGCACTGGACCTGCTGCCCAGGCTGGAGCGGCGGGGCGCGCGGCCCTCGGGGGAGCCCGGCTGCTCGTGCGCTCAGCCCGCCGGGGAGGTGGCCGCGCCCGGCTGGGCCCAGACTCGGGGCCGCGCCGGGGAGCCCCCCGCCTCCGCCTCTGCCGCGTCCGCCGCGGGCTGGCCCAACAAGCACACGCTGCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCTTCCCACTCGCTGGAGA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 154886 304 + 376347 GATCCTGGTGCGCCGGTTCCGCGTGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCACATCGCGCTGGACCTGCTGCCCAGGCTGGAGCGGCGCGGCGCGCGGCCCTCGGGG--ACCCGGCTGCTCGTGCGCGCAGCCCGCCGGGGAGTGTGCCGCGCCCGGCTGGGCC--AGCTCGGGGCCGCCCCGGGGAGCcccccgcc---------gccgcctccgccgcGGGCTGGCCCAACAAGCACACGCTGCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCTCGTCCCACTCGCTGGAGA i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2288629 305 - 8137123 GATCCTGGTGCGCAGGTTCCGCGTGCTCATCCTGATGGTGTTTCTGGTGGCCTGCGCGCTGCACATCGTGTTGGACCTGCTGCCGAAACTGGAGCGGCGCGCTGCGGGGCCGTCCGGGGAGCCCGGGTGCTCGTGCGCTCAGCCGGCTGCCGAGGTGGCAGCTCTTGGATGGGCTAAGGCACGGGGCCACCCTGGGGAGCCCCCG------------GCCGCCGGCGACGCGGGCTGGCCCAACAAGCACACGCTGCGCATCCTGCAGGACTTCAGCTCCGACCCCTCCTCCAACCTCACGTCCCACTCGCTGGAGA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61076831 308 - 77573801 GATCCTGGTGCGCAGGTTCCGCGTGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCACATCGTGCTGGACTTGCTGCCCAAGCTGGAGCGGCGCGCCGTGCGGCCCTCGGGGGAGCCCGGGTGCTCGTGCGCGCAGCCCGCGGTGGAGGCGGCTGCGCCGGGCTGGGCCAAGGCGCGGGGACGCCCGGGGGAGCCC---------GCTTCCGCGGCGGGCGACGGGGGCTGGCCCAACAAACACACGCTGCGTATCCTGCAGGACTTTAGCTCCGACCCTTCCTCCAACCTCACGTCCCACTCGCTGGAGA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e saiBol1.JH378296 399412 1558 - 2409723 M e panPan2.chr7 574127 1503 + 162613886 M a score=1019055.000000 s hg38.chr7_KI270899v1_alt 185845 128 + 190869 AACTGCCGCCCGCGGCCGAGCCGGCCGAGCGCGCCTTGCGGG-GGCGGGATCCCGGCGCCCTAAGACCccacgaccccgcgcaccggccgctgctgcgagaccccggcccgcgtcggtccgagtcgccc s panTro5.chr7_NW_015973580v1_random 61233 128 - 83720 AACTGCCGCCGGCGGCCGAGCCGGCCGAGCGCGCCTTGCGGG-GGCGGGATCCCGGCGCCCTAAGACCccacgaccccgcgcaccggccgctgctgcgagaccccggcccgcgtcggtccgagtcgccc i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 575630 128 + 162613886 AACTGCCGCCGGCGGCCGAGCCGGCCGAGCGCGCCTTGCGGG-GGCGGGATCCCGGCGCCCTAAGACCccacgaccccgcgcaccggccgctgctgcgagaccccggcccgcgtcggtccgagtcgccc i panPan2.chr7 M 1503 C 0 s gorGor5.CYUI01015914v1 147271 128 - 432965 AACTGCCGCCCGCGGCCGAGCCGGCCGAGCGCGCCTTGCGGG-GGCGGGATCCCGGCGCCCTAAGACCccacgaccccgcgcaccggccgctgctgcgagaccccggcccgcgtcggtccgagtcgccc i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 208794 128 + 85365473 AACTGCCGCCGGCGGCCGAGCCTGCCGAGCGCGCCTTGCGGG-GCCGGGATCCCGGCGCCCTGAGACCCCACGACCCCGCGCACCGGCCGCTGCTGCGAGACCCCGGCCCGCGCCGGTCCGAGCCGCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34057319 128 + 185818997 AACTGCCGCCCGCGGCGGAGCCGGCCGAGCGCGCCTTGCGGG-GGCGGGACCCCGGCGCCCGGAGACCCCACGACCCCGCGCACCGGCCGCTGCTGCGAGACCCCGGCCCGCGTCAGTCCGAGCCGCCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33675258 128 + 192294377 AACTGCCGCCCGCGGCGGAGCCGGCCGAGCGCGCCTTGCGGG-GGCGGGACCCCGGCGCCCGGAGACCCCACGACCCCGCGCACCGGCCGCTGCTGCGAGACCCCGGCCCGCGTCAGTCCGAGCCGCCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4441556 128 - 9440265 AACTGCCGCCCGCGGCGGAGCCGGCCGAGCGCGCCTTGCGGG-GGCGGGACCCCGGCGCCCGGAGACCCCACGACCCCGCGCACCGGCCGCTGCTGCGAGACCCCGGCCCGCGTCAGTCCGAGCCGCCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17031922 128 - 21915920 AACTGCCGCCCGCGGCGGAGCCGGCCGAGCGCGCCTTGCGGG-GGCGGGACCCTGGCGCCCGGAGACCCCACGACCCCGCGCACCGGCCGCTGCTGCGAGACCCCGGCCCGCGTCAGTCCGAGCCGCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160783 128 - 21531802 AACTGCCGCCCGCGGCGGAGCCGGCCGAGCGCGCCTTGCGGG-GGCGGGACCCGGGCGCCCGGAGACCCCACGACCCCGCGCACCGGCCGCTGCTGCGAGACCCCGGCCCGCGTCAGTCCGAGCCGCCG i chlSab2.chr28 C 0 C 0 s calJac3.chrUn_GL286444 88405 128 + 138751 AGCTGCAGCCTGCGGCCGAGCCGGCAGAGCGCGCCTTGCGTG-GGCGGAACCCCGGCGCGCTGAGACCCCGCGACCCCGCGCACCGGCCGCTGCTCCGCGACCCCGGTCCGCGTCGCTTCGAGCCGCCC i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 562517 128 - 2125214 AGCTGCAGCCTGCGGCCGAGCCGGCAGAGCGCGCCTTGCGTG-GGCGGGACCCCGGCGCGCTGAAACCccgcgaccctgcgcaccggccgctgctccgcgaccccggtccgcgtcgctcggagccgccc i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 155190 124 + 376347 AGCTGCCGCCTGCGGCCGAGCGGGCAGAGCGCGCCCT-CGTGTGGCGGACCCCCGGCGCGCTGAGACCCCGCGACCCCGCGCACCGGCCG----TCTGCCGCACCCGTCCTCGTCGGTCCGAGCCGCCC i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2288934 128 - 8137123 AACTGCCTCCAGCAGCTGAGCCGGCCGAGCGCGCCGTTCGGG-GCCAGGGTCCCGGCGCCCTGCGACCCCGAGACCCTGCTCACCGGCCGCTGCTTCGAGACCCCGGCAACCGGCGGTCGGTGCCGCCT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61077139 128 - 77573801 AACTGCCGGCCGCGGCCGACCCGGCCGAAGGCGCCTTGCAGG-GGCAGGATcccggccggccccggccccgcgATCCCGCGCACCGGCCACTGCTCCGAGACCCCGGGCCGCGCCGGTCGGTGCCGCCC i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e manLeu1.NW_012101810v1 197322 1565 - 2515279 M e saiBol1.JH378296 399412 1558 - 2409723 M a score=342583.000000 s hg38.chr7_KI270899v1_alt 185973 36 + 190869 cccggccccggcGGAGACGCCTCCCTCCTGGCCAGG s panTro5.chr7_NW_015973580v1_random 61361 36 - 83720 cccggccccggcGGAGACGCCTCCCTCCTGGCCAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 575758 36 + 162613886 cccggccccggcGGAGACGCCTCCCTCCTGGCCAGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 147399 36 - 432965 cccggccccggcGGAGACGCCTCCCTCCTGGCCAGG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 208922 36 + 85365473 CCCGGCCCCGGCGGAGACGCCTCCCTCTTGGCCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34057447 36 + 185818997 CCCGGCCCCGGCGGAGACACCTCGCTCCTGGCCAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33675386 36 + 192294377 CCCGGCCCCGGCGGAGACACCTCGCTCCTGGCCAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4441684 36 - 9440265 CCCGGCCCCGGCGGAGACACCTCGCTCCTGGCCAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17032050 36 - 21915920 CCCGGCCCCGGCGGAGACACCTCGCTCCTGGCCAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160911 36 - 21531802 CCCGGCCCCGGCGGAGACGCCTCGCTCCTGGCCAGG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 198891 36 - 2515279 CCCGGCCCCGGCGGAGACACCTCGCTCCTGGCCAGG i manLeu1.NW_012101810v1 M 1565 C 0 s calJac3.chrUn_GL286444 88533 36 + 138751 CCTGGCCCCGGCGGGGACGGACCCCTGTTGGCCAGG i calJac3.chrUn_GL286444 C 0 C 0 s cebCap1.NW_016107703v1 562645 36 - 2125214 cccggccccggcGGGGACGGCCCCCTCTTGGCCAGG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 155314 36 + 376347 CCCGGCCCCGGCGGAGACGGCCCCCTCCTGGCCAGG i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2289062 36 - 8137123 CCTGGTCCGGGCGGGGATGGCTCCCTCTTGGCTAGG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61077267 36 - 77573801 CCTGGCCCGAGCGGGGACAGCTCTCTCCTGGCGAAG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e saiBol1.JH378296 399412 1558 - 2409723 M a score=5382972.000000 s hg38.chr7_KI270899v1_alt 186009 627 + 190869 CTGTTCGAGCACCCGCTTTACCGGGTGGCGGTTCCGCCGCTCACGGAGGAGGACGTCCTGTTCAATGTGAACAGCGACACCAGGCTCAGCCCCAAAGCG---GCGGAGAACCCGGACTGGTGAGTGGGGGC------------TGGCAGGTGCCCAC----------CCC---CAAGGGAGCCGTGAGCCCA----------------------------------AGGCATGGTGTAGAGA--------GGTTCAGGGGCCCCAG-AGGG------CCGCCCCCCATGGAAGAGG------CCGGGC--AGGGAGTGTGGTGCGGGAGGAGGCAGC------CGCCTACCTCAGGGCGCTGCCTTTGTCTC---CAGAATAACCTCCTCCTTGGGAGGGGCTGCCGGCTGGTCCGGGAGCTGTG-CCCTGTGGCTGCTGGTGAGGAAGCCAGA-------------------------CCCCGCGCCCTTTAGAAGCGAGTCCTGACC-----AGCCGTGGTCACCAGCTTGGGAAAT-GGGGTCAGGCAATGAATGAATGAGTTG------------GTGAGG----GAAGGA-------------------------------------GCCAGGCTGCCGCTGGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGCACCTTGGAGAAGGTCTGGATGTGCCTATTGAGTCTTTTAAACCCAGTGGCTG-GAGCAGAATTATCAGAGGGGCTTGCTGGCAGCCGTGAGGTGCAACAAGGCGGCCCAGCCAGCAAGGGC--GG------ s panTro5.chr7_NW_015973580v1_random 61397 606 - 83720 CTGTTCGAGCACCCGCTGTACCGGGTGGCGGTTCCGCCGCTCACGGAGGAGGACGGCCTGTTCACTGTGAACAGCGACACCAGGCTCAGCCCCAAAGCG---GCGGAGAACCCGGGCTGGTGAGTGGGGGC------------TGGCAGGTGCCCAC----------CCC---CAAGGGAGCCGTGAGCCCA----------------------------------AGGCATGGTGTAGAGA--------GGTTCAGGGGCCCCAA-AGGG------CCGCCCCC-ATGGAAGAGG------CCGGGC--AGGGAGTGTGGTGCGGGAGG--------------------------GCACTGCCTTTGTCTC---CAGAATAACCTCCTCCTTGGGAGGGGCTGCCGGCTGGTCCGGGAGCTGTG-CCCTGTGGCTGCTGGTGAGGAAGCCAGA-------------------------CCCTGCGCCCTTTAGAAGCGAGTCCTGGCC-----AGCCGTGGCCACCAGCTTGGGAAAT-GGGGTCAGGCAATGAATGAATGAGTTG------------GTGAGG----GAAGGA-------------------------------------GCCAGGCTGCCGCTGGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGCACCTTGGAGAAGGTCTGGATGTGCCTATTGGGTCTTTTAAACCCAGTGGCTG-GAGCAGAATTATCAGAGGGGCTTGCTGGCAGCCGTGAGGTGCAACAAGGCGGCCCAGCCAGCAAGGGC--GG------ i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 575794 606 + 162613886 CTGTTCGAGCACCCGCTGTACCGGGTGGCGGTTCCGCCGCTCACGGAGGAGGACGGCCTGTTCACTGTGAACAGCGACACCAGGCTCAGCCCCAAAGCG---GCGGAGAACCCGGGCTGGTGAGTGGGGGC------------TGGCAGGTGCCCAC----------CCC---CAAGGGAGCCGTGAGCCCA----------------------------------AGGCATGGTGTAGAGA--------GGTTCAGGGGCCCCAA-AGGG------CCGCCCCC-ATGGAAGAGG------CCGGGC--AGGGAGTGTGGTGAGGGAGG--------------------------GCACTGCCTTTGTCTC---CAGAATAACCTCCTCCTTGGGAGGGGCTGCCGGCTGGTCCGGGAGCTGTG-CCCTGTGGCTGCTGGTGAGGAAGCCAGA-------------------------CCCTGCGCCCTTTAGAAGCGAGTCCTGGCC-----AGCCGTGGCCACCAGCTTGGGAAAT-GGGGTCAGGCAATGAATGAATGAGTTG------------GTGAGG----GAAGGA-------------------------------------GCCAGGCTGCCGCTGGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGCACCTTGGAGAAGGTCTGGATGTGCCTATTGAGTCTTTTAAACCCAGTGGCTG-GAGCAGAATTATCAGAGGGGCTTGCTGGCAGCCGTGAGGTGCAACAAGGTGGCCCAGCCAGCAAGGGC--GG------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 147435 627 - 432965 CTGTTCGAGCACCCGCTTTATCGGGTGGCGGTTCCGCCGCTCACGGAGGAAGACGTCCTGTTCAATGTGAACAGCGACACCAGGCTCAGCCCCAAAGCG---GCGGAGAACCCGGACTGGTGAGTGGGGGC------------TGGCAGGTGCCCAC----------CCC---CAAGGGAGCCGTGAGCCCA----------------------------------AGGCACGGTGTAGAGA--------GGTTCAGGGGCCCCAA-AGGG------CCGCCCCCCATGGAAGAGG------CCGGGC--AGGGAGTGTGGTGCGGGAGGAGGCAGC------TGCCTACCCCAGGGCACTGCCTTTGTCTC---CAGAATAACCTCCTCCTTGGGAGGGGCTGCCGGCTGGTCCGGGAGCTGTG-CCCTGTGGCTGCTGCTGAGGAAGCCAGA-------------------------CCCTGCGCCCTTTAGAAGCGAGTCCTGGCC-----AGCCGTGGCCACCAGCTTGGGAAAT-GGGGTCAGGCAATGAATGAATGAGTTG------------GTGAGG----GAAGGA-------------------------------------GCCAGGCTGCCGCTGGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGCACCTTGGAGAAGGTCTGGATGTGCCTATTGAGTCTTTTAAACCCAGTGGCTG-GAGCAGAATTATCAGAGGGGTTTGCTGGCAGCCGTGAGGTGCGACAAGGTGGCCCACCCAGCAAGGGC--GG------ i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 208958 620 + 85365473 CTGTTCGAGCACCCGCTTTACCGGGTGGC---TCCGCGGCTCACGGAGGACGACGTCCTGTTCAGTGTGAACAGCGACACCAGGCTCAGCCCCAAAGCG---GCGGAGAACCCGGACTGGTGAGTGGGGGC------------TGGCAGGTGCCCGC----------CCC---CAAGGGAGCCGTGAGCCCA----------------------------------AGGCATGGGGTAGAGA--------GGTTCAGGGGCCCCGA-GGGG------CTGCCCCC-ATGGAAGAGG------CCGGGC--AGGGAGTGTGGTGCGGGAGGAGGCAGC------CGCCTACCTCAGGGCACTGCCTTTGTCTC---CAGAATAA---CCTCCTTGGGAGGGGCTGCCGGCTGGTCCGGGAGCTGTG-CCCTGTGGCTGCTGGTGAGGAAGCCAGA-------------------------CCCTGCGCCCTTTAGAAGCGAGTCCTGGCC-----AGCCCTGGCCACCAGCTTGGGAAAT-GGGGTCAGGCAATGAATGAATGAGTTG------------GTGAGG----GAAGGA-------------------------------------GCCAGGCTGCCGCTGGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGCACCTTGGAGAAGGTCTAGATGTGCCTATTGAGTCTTTTCAACCCAGTGGCTG-GAGCAGAATTATCAGAGGGGCTTGCTGGCAGCCGTGAGGTGCAACGAGGGGGCCCACCCAGCAAGGGC--GG------ i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34057483 643 + 185818997 CTGTTCGAGCACCCGCTTTACCGGGTGGCGGTTCCGCCGCTCACGGAGGACGACGTCTTGTTCAATGTGAACAGCGACAGCAGGCTCAGCCCCAAAGCG---GTGGAAAGCCCGGACTGGTGAGTGGGGGC------------TGGCAGGTGCCCAC----------CACCAGCACGGGAGCCGTGAGCCCA----------------------------------AGGCACGGCGGAGAGA--------GGTTCAGGGGCCCCGA-GAGG------CCGCCCCCCAGCGAAGAGG------CCGGGC--AGGGAGTGTGGTGTGGGAGGAGGCAGC------CGCCCAGCTCAGGGCACTGCCTTTGTCTC---CAGAATAACCTTCTCCTTGGGAGGGGCTGCCGGGTGGT--GGGAGCTGTGCCCCTGTGGCTGCTGGTGAGGAAGCCAGA-------------------------CCCTGCGCCCTTTAGAAGCGAGTCC---------------TGGCCATCAGCTTGGGAAATGGGGGTCAGGCAATGAATGAATGGGTTG------------GTGAGG----GAAGGAGAA--------------TGGCCTTTCCCAGGGAAGGGGCCGGGCTGCCGCTCGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGTACCTTGGAGAAGGTCTGGATGTGCCTATTGAGTCTTTTAAACCCAGTGGCTG-GGGCAGAATGATCAGAGGGGTTTGCTGGCAGCCATGAGGTGCAACAAAGGGGCCCACCCAACAAGGGC--GG------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33675422 643 + 192294377 CTGTTCGAGCACCCGCTTTACCGGGTGGCGGTTCCGCCGCTCACGGAGGACGACGTCTTGTTCAATGTGAACAGCGACAGCAGGCTCAGCCCCAAAGCG---GTGGAAAGCCCGGACTGGTGAGTGGGGGC------------TGGCAGGTGCCCAC----------CACCAGCACGGGAGCCGTGAGCCCA----------------------------------AGGCACGGCGGAGAGA--------GGTTCAGGGGCCCCGA-GAGG------CCGCCCCCCAGGGAAGAGG------CCGGGC--AGGGAGTGTGGTGTGGGAGGAGGCAGC------CGCCCAGCTCAGGGCACTGCCTTTGTCTC---CAGAATAACCTTCTCCTTGGGAGGGGCTGCCGGGTGGT--GGGAGCTGTGCCCCTGTGGCTGCTGGTGAGGAAGCCAGA-------------------------CCCTGCGCCCTTTAGAAGCGAGTCC---------------TGGCCATCAGCTTGGGAAATGGGGGTCAGGCAATGAATGAATGGGTTG------------GTGAGG----GAAGGAGAA--------------TGGCCTTTCCCAGGGAAGGGGCCGGGCTGCCGCTCGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGTACCTTGGAGAAGGTCTGGATGTGCCTATTGAGTCTTTTAAACCCAGTGGCTG-GGGCAGAATGATCAGAGGGGTTTGCTGGCAGCCATGAGGTGCAACAAAGGGGCCCACCCAACAAGGGC--GG------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4441720 643 - 9440265 CTGTTCGAGCACCCGCTTTACCGGGTGGCGGTTCCGCCGCTCACGGAGGACGACGTCCTGTTCAATGTGAACAGCGACAGCAGGCTCAGCCCCAAAGCG---GTGGAAAGCCCGGACTGGTGAGTGGGGGC------------TGGCAGGTGCCCAC----------CACCAGCACGGGAGCCGTGAGCCCA----------------------------------AGGCACGGCGGAGAGA--------GGTTCAGGGGCCCCGA-GAGG------CCGCCCCCCAGGGAAGAGG------CCAGGC--AGGGAGTGTGGTGTGGGAGGAGGCAGC------CGCCCAGCTCAGGGCACTGCCTTTGTCTC---CAAAATAACCTTCTCCTTGGGAGGGGCTGCCGGGTGGT--GGGAGCTGTGCCCCTGTGGCTGCTGGTGAGGAAGCCAGA-------------------------CCCTGCGCCCTTTAGAAGCGAGTCC---------------TGGCCATCCGCTTGGGAAATGGGGGTCAGGCAATGAATGAATGGGTTG------------GTGAGG----GAAGGAGAA--------------TGGCCTTTCCCAGGGAAGGGGCCAGGCTGCCGCTCGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGCACCTTGGAGAAGGTCTGGATGTGCCTATTGAGTCTTTTAAACCCAGTGGCTG-GGGCAGAATGATCAGAGGGGTTTGCTGGCAGCCATGAGGTGCAACAAAGGGGCCCACCCAACAAGGGC--GG------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17032086 643 - 21915920 CTGTTCGAGCACCCGCTTTACCGGGTGGCGGTTCCGCCGCTCACGGAGGACGACGTCCTGTTCAATGTGAACAGCGACAGCAGGCTCAGCCCCAAAGCG---GTGGAAAGCCCGGACTGGTGAGTGGGGGC------------TGGCAGGTGCCCAC----------CACCAGCACGGGAGCCGTGAGCCCA----------------------------------AGGCACGGCGGAGAGA--------GGTTCAGGGGCCCCTA-GAGG------CCGCCCCCCAGGGAAGAGG------CCGGGC--AGGGAGTGTGGTGTGGGAGGAGGCAGC------CGCCCAGCTCAGGGCACTGCCTTTGTCTC---CAGAATAACCTTCTCCTTGGGAGGGGCTGCCGGGTGGT--GGGAGCTGTGCCCCTGTGGCTGCTAGTGAGGAAGCCAGA-------------------------CCTTGCGCCCTTTAGAAGCGAGTCC---------------CGGCCATCAGCTTGGGAAATGGGGGTCAGGCAATGAATGAATGGGTTG------------GTGAGG----GAAGGAGAA--------------TGGCCTTTCCCAGGGAAGGGGCCAGGCTGCCGCTCGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGCACCTTGGAGAAGGTCTGGATGTGCCTATTGAGTCTTTTAAACCCAGTGGCTG-GGGCAGAATGATCAGAGGGGTTTGCTGGCAGCCATGAGGTGCAACAAAGGGGCCCACCCAACAAGGGC--GG------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 160947 622 - 21531802 CTGTTCGAGCACCCGCTTTACCGGGTGGCGGTGCCGCCGCTCACGGAGGACGACGTCCTGTTCAATGTGAACAGCGACAGCAGGCTCAGCCCCAGAGCG---GTGGAAAGCCCGGACTGGTGAGTGCGGGC------------TGGCAGGTGCCCAC----------CCC---CGCGGGAGCCGTGAGCCCA----------------------------------AGGCACGGTGGAGAGA--------GGTTCAGGGGCCCC-A-GAGG------C--CCCCCCAGGGAAGAGG------CCGGGC--AGGGAGTGTGGTGTGGGAGGAGGCGGC------CGCCCAGCTCGGGGCCCTACCTTTGTCTC---CAGAGTAACCTCCTCCTTGGGAGGGGCTGCCGGGGGCT--GGGAGCTGTGCCCCTGTGGCTGCTGGTGAGGAAGCCAGA-------------------------CCCTGCGCCCTTTAGAAGCGAGTCC---------------TGGCCATCAGCTTGGGAAAT-GGGGTCAGGCAGTGAATGAATGGGTTG------------GTGAGA----GAAGGAGAG--------------TGG-ATTTCCCCGGGAAGGGGCCAGGCTGCCGCTGGGCTTTCA-GACACTTGGTGAGGGTGCTCTGGATGGGCACCTGGGAGAAGGTC-------------TGAGTCTTTTAAACCCAGTGGCTG-GAGCAGAATTATCAGAGGATCTTGCTGGCAGCCATGAGGTGCAACAAAGGGGCCCACCCAGCACGGGC--GG------ i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 198927 643 - 2515279 CTGTTCGAGCACCCGCTTTACCGGGTGGCGGTTCCGCCGCTCACGGAGGACGACGTCCTGTTCAATGTGAACAGCGACAGCAGGCTCAGCCCCAAAGCG---GTGGAAAGCCCGGACTGGTGAGTGGGGCC------------TGGCAGGTGCCCAC----------CACCAGCACGAGAGCCGTGAGCCCA----------------------------------AGGCACGGCGGAGAGA--------GGTTCAGGGGCCCCGA-GAGG------CCGCCCCCCAGGGAAGAGG------CCAGGC--AGGGAGTGTGGTGTGGGAGGAGGCAGC------CGCCCAGCTCAGGGCACTGCCTTTGTCTC---CAGAATAACCTTCTCCTTGGGAGGGGCTGCCGGGTGGT--GGGAGCTGTGCCCCTGTGGCTGCTAGTGAGGAAGCCAGA-------------------------CCTTGCGCCCTTTAGAAGCGAGTCC---------------TGGCCATCAGCTTGGGAAATGGGGGTCAGGCAATGAATGAATGGGTTG------------GTGAGG----GAAGGAGAA--------------TGGCCTTTCCCAGGGAAGGGGCCAGGCTGCCGCTGGGCTTTCA-GACACTTGGCGAGGGTGCTCTGGGTGGGCACCTTGGAGAAGGTCTGGATGTGCCTATTGAGTCTTTTAAACCCAGTGGCTG-GGGCAGAATGATCAGAGGGGTTTGCTGGCAGCCATGAGGTGCAACAAAGGGGCCCACCCAACAAGGGC--GG------ i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 88569 636 + 138751 CTGTTCGAGCACCCGCTGTACCAGGTGTTAGTCCCGCAGCTCACGGAGGACGACGTCCTGTTTAACGTGAACAGCTACACCAGGCTCAGCCCCAAGGCG---GCGGAGAACCCGGACTGGTGAGTGGGGGC------------GGGCAGGTGCCCAC----------CC----CAAGGGAGCGGTGAGCCC-----------------------------------AGGCATGGTGTGGAGA--------GTTTCAGGGGCCCCCA-GAGGGCTGTCCCCCACCCCATGGAAGAGG------CCGG----------------GCAGGACGCAGCTGC------C-TCTAGCTCAGGGCACTGCCTTTGTCTC---CAGGATGACCTCCTCCTCGGGAGGGGCTGCCTGATGGTCTGGGAGCTGTG-CCCTGTGGCTGCTGGTGAGGAAGACAGA-------------------------TCCTGCTCCCTATAGAG-CAAGTCCTGGCC-----CGCCCGGGCCACGAGCTTGGGAAAT-GGGGTCAGACAATGAATGAATGAGTTG------------GTGAGG----GAAGGAAAG--------------CCGCCTTTCCCTGGGAGGGGGGCAAGCTGCTGTTCATCTTGCA-GACACTTGGTGAGGGTGTCCTGGGTGGGTACCCTGGAAAAGGCCTGGATGTGCCTATTGAGTCTTTTAAAACCAGTGGCTG-CAGCAGAATTATCAGAGGGGCTTGCTGGCAGCCATGAGGTGCAACAAAGGGGTCCACCCAGTAAGGGC---------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 400971 650 - 2409723 CTGTTCGAGCACCCTCTGTACCAGGTGTCAGTCCCGCAGCTCACGGAGGACGACGTCCTGTTTAACGTGAACAGCGACACCAGGCTCAGCCCCAAGGCG---GTGGAGAACCCGGACTGGTGAGTGGGGGC------------GGGCAGGTGCCCAC----------CC----CAAGGGAGCGGTGAGCCC-----------------------------------AGGCACGGTGTGGAGA--------GGTTCAGGGGCCGCCA-GAGGGCCGTCCCCCACCCCATGGAAGAGG------CCAGGC--AGGGAACGTGGTGCAGGACGCAGCAGC------C-TCTAGCTCAGGGCACTTCCTTTGTCTC---CAGGATGACCTCCTCCCCAGGAGGGGCTGCCTGGTGG-CTGGGAGCTGTG-CCCTGTGGCTGCTGGTGAGGAAGACAGA-------------------------TCCTGCTCCCTATAGAGCCGAGTCCTGGCC-----AGCCCTGGCCACGAGCTTGGGAAAT-GGGGTCAGACAATGAATGAATGAGTTG------------TCAAGG----GAAGGAGAG--------------CCGCCTTTCCCTGGGAGGGGGCCAGGCTGTTGTTAATCTTGCA-GACACTTGGCAAGGGTGTCCTGGGTGGACACCCGGGAAAAGGCCTGGATGTGCCTATTGAGTCTTTTAAAACCAGTGGCTG-GAGCAGAATTATCAGAGGGGCTTGCTGGCAGCCATAAGGTGCAACAAAGGGGTCCACCCGGTAAAGGC---------- i saiBol1.JH378296 M 1558 C 0 s cebCap1.NW_016107703v1 562681 646 - 2125214 CTGTTCGAGCACCCGCTGTACCAGGTGTCAGTCCCGCAGCTCACGGAGGACGACGTCCTGTTTAACGTGAACAGCGACACCAGGCTCAGCCCCAAGCCG---GCGGAGAACCCGGACTGGTGAGTAGGGGC------------GGGCAGGTGCCCAC----------TC----CAAGGGAGCGGTGAGCCC-----------------------------------AGGCACGGTGTGGAGA--------GGTTCAGGGGCCCCCA-GAGGGCCATTCCTCACCCCATGAAAGAGG------CCAGGC--AGGGAGTGTGGTGCAGGACGCAG----------C-TCTACCTCAGGGCACTGCCTTTGTCTC---CAGGATGACCTCCTCCTCGGGAGGGGCTGCCTGGTGGTCTGGGAGCTGTG-CCCTGTGGCTGCTGGTGAGGAAGACAGA-------------------------TCCTGCTCCCTATAGAG-CGAGTCCTGGCC-----AGCCCTGGCCACGAGCTTGGGAAAT-GGGGTCAGACAATGAATGAATGAGTTG------------TCGAGG----GAAGAGGAG--------------CTGCCTTTCCCTGGGAGGGGGCCAGGCTGCTGTTAATCTTGCA-GGCACTTGGCTAGGGTGTCCTGGGTGGGCACCCTGGAAAAGGCCTGGATGTGCCTATTGAGTCTTTTAAAACCAGTGGCTG-GAGCAGAATTATCAGAGGGACTTGCTGGCAGCCATGAGGTGCAACAAAGGGGTCCACCCAGTAAAGGC---------- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 155350 632 + 376347 CTGTTCGAGCACCCGCTGTACCGGGTGTCAGTCCCGCAGCTCACGGAGGACGACGTCCTGTTTAACGTGAACGGCGACACCAGGCTCAGCCCCAAGGCG---GCGGAGAACCCGGACTGGTGAGTGGGGGC------------GGGCGGGTGTCCAC----------CC----CAAGGGAGCGCTGGGCCC-----------------------------------AGGCACGGTTTGGAGA--------GGTTCAGGGGCCCCCA-GAGGGCCGTCCCCCACCCCATGGACGAGG------CCAGGC--AGGGAGC-TGGTGCAGGACGCAGCCGC------C-TCTAGCTCAGGGCGCTGCCTTTGTCTC---CAGGATGACCCCCTCCTCGGGAGGG-------------------GCTGTG-CCCGGTGGCTGCTAGTGAGGAAGACAGA-------------------------TCCTGCTCCCTGTAGAG-CGAGTCCTGGCC-----AGCCCTGGCCACGAGCTTGGGAAAT-GGGGTCGGACAATGAATGAATGAGTTG------------GTGAGG----GAAAGAGAG--------------CCGCCCTTCCCTGGGAGGGGGCCGGGCTGCCGTTAATCTCGCA-GACACTTGGCGAGGGTGTCCGGGGCGGGCATCCTGGAAAAGGCCTGGACGTGCCTATTGAGTCCTTTCACACCAGTGGCTG-GAGCGGAATTATTAGAGGGGCTCGCTGGCAGCCATGAGGGGCAGCCAAGGGGTCCACCCAGCAAAGGCAG-------- i aotNan1.NW_018514293v1 C 0 I 30 s otoGar3.GL873611 2289098 620 - 8137123 CTATTTGAACACCCGCTCTACCAGGTGGCTGTTCCGCCGCTAACGGAGGACGATGTCTTATTTAATGTGAACAGTGACCCCAGGTTCAGCCCAAAGTTG---GCAGAGAACCCGGACTGGTGAGTGGGAGC------------TAA---------------------------------------GAGCCCA----------------------------------AGGCACTGTGTACACA--------GGTTCAGGCACACTGGTGATG------GGAGCCCTCAGAGTACAGG------CTGGGCTAGGGGAGTGTG--------------TGC------C-TTTGGTTTGGGTCTCTGCCTTTGTCTCCTTCAGGACA-------CACCGGGAAGCTCT------------GGGAGGTGTT-CCCTGTGGCCTGTACTGTGGAAGGCAGACAGGACCCTGGGAGCTAGGGCAATGCCATGCTCCATTTAGAAGAAAGTGTTGGC-----------TGGTTTCTGGCTTGGGACGT-GGAGTCAGGCagtgaatgaatgagttgaggagtcagggagtgagt----gagtgagAG--------------TTGCCTTTCCCTAGGAAGATGCTGGGCTGCAG---ACCTTTCAGGGTACTTGACAACACTGATCTGGGTGGATATCTCAGAGAAGGTCTGCATGTGCCTGAT--GTCTTTTAAAA-CGGTCACTGAAAACAGAATTGTCAGGGGAATGTG-TGGCAGCAATAA-GTACAA-AGAGGTGCCCTCCCAGCCAAGGT--GT------ i otoGar3.GL873611 C 0 I 3 s canFam3.chr6 61077303 753 - 77573801 CTGTTCGAACACCCGCTCTACCAGGTGTCCGTTCCACCGCTCACCGAGGACGACGTCCTCTTCAATGTGAACAGTGACATCAGGTTCAACCCCAAGGCGGCCGCTGAGAATCCTGACTGGTGAGTGAGGCCGGAGGCCGCTCAGGGTGGGTGCCTGCAGGCCCGGAACCC---TCAAGCAGCCATCAGCCTGTGCTCCCCTTTCCCGCAGATGCCCTTGCACATCCAGGCATTGTTTAAAGAGGCGTAGGGGCTCAGGAACCCCCA-GGGGGCA---TGGACCCCTGTGGCAGAGTCCCCACCCTGGC--AAGGAGAGCTCTGTGGGGCGGGGCAGCATGGTGCCTCCTACTCAGGGCAGTGCCTTTGTCTC---TGGAGTGACTGCCTCCTTGAGAAGGGCCTCTGGGTGGTTTGGGAGCTGCT-CCCTGTGGAGTCAAGGGAGG--GTCAGT-------------------------GCTGACTCTATAGCAGAGCAGTTGCTGGCCTGCAAAGTCCTGGTCACTGGCTCTAGAAAC-TAAGTCAGGCAATGCATGCCCAAGCTG------------GCAAGGAAGCGAATGAGAGACAGAGACTGCCCCTTACCTTTCCCTGGGGAGCTGCTG----GCTGCTAAGATTTTA-GATTCTCGGCGACATTTCTCTAG-TGGACACGTCAG-GAAAGTCTGCAAAAGCCTAATGAGCCTTGTAAG-CCAGCCGCTGAGAACAAAATTAGCAGAGGGGCGTGCTGGCCCCAATGAGGCATAACAAAAGGGCTCTCCCAGCCGGGGT--GCAGACAG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M a score=91211.000000 s hg38.chr7_KI270899v1_alt 186636 22 + 190869 ----------TGGG--TGTGCTGGCTGCAAAGAG s panTro5.chr7_NW_015973580v1_random 62003 22 - 83720 ----------TGGG--TGTGCTGGCTGCAGAGAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 576400 22 + 162613886 ----------TGGG--TGTGCTGGCTGCAGAGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 148062 22 - 432965 ----------TGGG--TGTGCTGGCTGCAAAGAG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 209578 22 + 85365473 ----------TGGG--TGTGCTGGCTGCAGAGAG i nomLeu3.chr20 C 0 M 100 s rheMac8.chr3 34058126 21 + 185818997 -----------GGG--TGTGCTGGCTGCAAAGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33676065 21 + 192294377 -----------GGG--TGTGCTGGCTGCAAAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4442363 21 - 9440265 -----------GGG--TGTGCTGGCTGCAAAGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17032729 21 - 21915920 -----------GGG--CGTGCTGGCTGCAAAGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 161569 22 - 21531802 ----------CGGA--TGTGCTGGCTGCAAAGAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 199570 21 - 2515279 -----------GGG--TGTGCTGGCTGCAAAGAG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 89205 12 + 138751 ----------------------AGCTGCAAAGGG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 401621 12 - 2409723 ----------------------CGCTGCAAAGGG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 563327 12 - 2125214 ----------------------AGCTGCAAAGGG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2289721 22 - 8137123 ----------CGGG--CGTGCCCACTGCAGAGGG i otoGar3.GL873611 I 3 C 0 s canFam3.chr6 61078056 33 - 77573801 CAGCTGCCCTTGGAACGGTGCCAGCTGCGTTGG- i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e aotNan1.NW_018514293v1 155982 30 + 376347 I a score=122403.000000 s hg38.chr7_KI270899v1_alt 186658 21 + 190869 ATGATGGCTCGAT-AAAGGGCG s panTro5.chr7_NW_015973580v1_random 62025 21 - 83720 ATGATGGCTCGAT-AAAGGGCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 576422 21 + 162613886 ATGATGGCTCGAT-AAAGGGCG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 148084 21 - 432965 ATGATGGCTCGAT-AAAGGGCG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34058147 21 + 185818997 AGGATGGCTGGAT-AAAGGGCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33676086 21 + 192294377 AGGATGGCTGGAT-AAAGGGCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4442384 21 - 9440265 AGGATGGCTGGAT-AAAGGGCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17032750 21 - 21915920 AGGATGGCTGGAT-AAAGGGCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 161591 21 - 21531802 ACGATGGCTCCAT-AAAGGGCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 199591 21 - 2515279 AGGATGGCTCGAT-AAAGGGCG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 89217 22 + 138751 ATGATGGCTCAGTAAAAGTGTG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 401633 21 - 2409723 TTGATAGCTCTGT-AAAGTGTG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 563339 21 - 2125214 ATGATAGCTCTGT-AAAGTGTG i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2289743 20 - 8137123 -TGGTGGCTTCAA-TAAATGCT i otoGar3.GL873611 C 0 I 1 s canFam3.chr6 61078089 21 - 77573801 GTGACAGCTTCAT-AAAAGGTG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e aotNan1.NW_018514293v1 155982 30 + 376347 I e nomLeu3.chr20 209600 100 + 85365473 M a score=832789.000000 s hg38.chr7_KI270899v1_alt 186679 96 + 190869 AGAAGCCACGGCAGGAACCTCTCTTTAAACTGTCCTGGCT-------AAGCCCTTTCCCCACCCCCCGGCCCCTCCCTCCGCCACACAGATCAAAACAAGCAG s panTro5.chr7_NW_015973580v1_random 62046 96 - 83720 AGAAGCCACGCCAGGAACCTCTCTTTAAACTGTCCTGGCT-------AAGCCCTTTCCCCACCCCCCGGCCCCTCCCTCCGCCACACAGATCAAAACAAGCAG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 576443 96 + 162613886 AGAAGCCACGCCAGGAACCTCTCTTTAAACTGTCCTGGCT-------AAGCCCTTTCTCCACCCCCCGGCCCCTCCCTCCGCCACACAGATCAAAACAAGCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 148105 96 - 432965 AGAAGCCACGCCAGGAACCTCTCTTTAAACTGTCCTGGCT-------AAGCCCTTTCCCCACCCCCCGGCCCCTCCCTCCACCACACAGATCAAAACAAGCAG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34058168 96 + 185818997 AGAAGCCACGCAGGGAACATCTCTTTCAACTGTCCTGGCT-------GAGTCCTTTCCCCACCCCCCAGCCCTTCCCTCCGCCACACAGATCAAAACAAGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33676107 96 + 192294377 AGAAGCCACGCAGGGAACATCTCTTTCAACTGTCCTGGCT-------GAGTCCTTTCCCCACCCCCCAGCCCTTCCCTCCGCCACACAGATCAAAACAAGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4442405 96 - 9440265 AGAAGCCACGCAGGGAACATCTCTTTAAACTGTCCTGGCT-------GAGTCCTTTCCCCACCCCCCAGCCCTTCCCTCCGCCACACAGATCAAAACAAGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17032771 96 - 21915920 AGAAGCCACGCAGGGAACATCTCTTTAAACTGTCCTGGCT-------GAGTCCTTTCCCCACCCCCCAGCCCTTCCCTCCGCCACACAGATCAAAACAAGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 161612 96 - 21531802 AGAAGCCACGCAGGGAACATCTCTTTAAACTGTCCTGGCT-------AAGCCCTTTCCCCACCCCCCAGCCCTTCCCTCGGCCACACAGATCAAAACAAGCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 199612 96 - 2515279 AGAAGCCACGCAGGGAACATCTCTTTAAACTGTCCTGGCT-------GAGTCCTTTCCCCACCCCCCAGCCCTTCCCTCCGCCACACAGATCAAAACAAGCAG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 89239 96 + 138751 AGAAGCCAGGCCAGGAACGTCTCTTTAAACAGTTCTGGCT-------AAGCCCTTTCCCCACCCCCGGGCCCTTCCCTCCACCACACAGATCAAAACAAGCAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 401654 96 - 2409723 AGAAGCCGGGCCAGGAACGTCTCTTTAAACACTCCTGGCT-------AAGCCCTTTCCCCACCCCCGGGCCCTTCCCTCCACCACACAGATCAAAACAAGCAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 563360 96 - 2125214 AGAAGCTGGGCCAGGAACGTCTCTTTAAACAGTCCTGCCT-------AAGCCCTTTCCCCACCCCCGGGCCCTTCCTTCCACCACACAGATCAAAACAAGCAG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 156012 96 + 376347 AGAAGCTGGGCCAGCAACGTCTCTTTAAACAGCCCTGGCT-------GAGCCCTTTCCCCACCCCCGGGCCCTTCCCTCCAGCACACAGAGCAAAACAAGCAG i aotNan1.NW_018514293v1 I 30 C 0 s otoGar3.GL873611 2289764 92 - 8137123 TGAAGCCACCCTGGAAGCATCTTTTT-AACTGTCCCGGTT-------AAACCCTTCCCCCG---CAAGGCCCTTCCCACAGCTGCACAGATCAAAACAGGCAG i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61078110 101 - 77573801 AGAAGCATCCTCAGTAGCATCGCTTTAAACTGTCCTGGTTTAAACAGGATCCCCCACCCCCACCCCACGCCCT--CCTCGGCCACACAGATCAGAATAAACGG i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e nomLeu3.chr20 209600 100 + 85365473 M a score=6632183.000000 s hg38.chr7_KI270899v1_alt 186775 696 + 190869 ATGCTACA--CCGAAGCAGTGGAACATTAACCA-CGACAAGGCCAGAATAAGTAACTACCTGCC------GAAGGTTACCCCAGCAG--CAGAGGGGGAGACCAGCCTTCCAAAAGATCTGGTTGAAAGTCCCTTCTTCCCTGAAATGT--CCAGGCCCAGTGTCTTCTGTCTAAACACACT-GGCTGTTTGGAAGCCTCTGAGCCTTGCCTGCTGGTCAGGTTCAAGGAAATGCTTGGAAATTTGAGAACCAGAGCATTGGCCTGGG-CTGTGGCTCTC-----GGCAGGGAGAGAC-GGCCGCCCAGAGCAGCGAGTGGCCAGGAA-GTGTA-----------TCCTAGCCCCCCACCCCGCCCCCGTGTCCA--------------CCGCAGGACAGAGCTT-CGGCAGAAAGCACCTCAGCTTTAGGTGAATT-CGAGCTAGGACAAGTTCCGCGTTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCCTCCTCCAGAACGGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCTGCGTGGGCGGCGGGTCCTCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCCTTCCTCTCTCCCCACCCAAGGCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTGTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCT-GGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGAGTTTCATGCAGCCTGTGGTCA s panTro5.chr7_NW_015973580v1_random 62142 689 - 83720 ATGCTACA--CCGAAGCAGTGGAACATTAACCA-CGGCAAGGCCAGAATAAGTAACTACCTGCC------GAAGGTTACCCCAGCAG--CAGAGGGGGAGACCAGCCTTCCAAAAGATCTGGTTGAAAGTCCCTTCTTCCCTGAAATGT--CCAGGCCCAGTGTCTTCTGTCTAAACACACT-GGCTGTTTGGAAGCCTCTGAGCCTTGCCTGCTGGTCAGGTTCAAGGAAATGCTTGGAAATTTGAGAACCAGAGCATTGGCCTGGC-CTGTGGCTCTC-----GGCAGGGAGAGAC-GGCCGCCCAGAGCAGCGAGTGGCCAGGAA-GTGTA-----------TCCTAGCCCGCC-------CCCCATGTCCA--------------CTGCAGGACAGAGCTT-GGGCAGAAAGCACCTCAGCTTTAGGTGAATT-CGAGCTAGGACAAGTTCCGCGTTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCTTCCTCCAGAACGGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCCGCGTGGGCGGCGGGTCCTCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCCTTCCTCTCTCCCCACGCAAGGCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTGTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCT-GGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGAGTTTCATGCAGCCTGTGGTCA i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 576539 689 + 162613886 ATGCTACA--CCGAAGCAGTGGAACATTAACCA-CGGCAAGGCCAGAATAAGTAACTACCTGCC------GAAGGTTACCCCAGCAG--CAGAGGGGGAGACCAGCCTTCCAAAAGATCTGGTTGAAAGTCCCTTCTTCCCTGAAATGT--CCAGGCCCAGTGTCTTCTGTCTAAACACACT-GGCTGTTTGGAAGCCTCTGAGCCTTGCCTGCTGGTCAGGTTCAAGGAAATGCTTGGAAATTTGAGAACCAGAGCATTGGCCTGGG-CTGTGGCTCTC-----GGCAGGGAGAGAC-GGCCGCCCAGAGCAGCGAGTGGCCAGGAA-GTGTA-----------TCCTAGCCCGCC-------CCCCATGTCCA--------------CTGCAGGCCAGAGCTT-GGGCAGAAAGCACCTCAGCTTTAGGTGAATT-CGAGCTAGGACAAGTTCCGCGTTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCTTCCTCCAGAACGGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCCGCGTGGGCGGCGGGTCCTCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCCTTCCTCTCTCCCCACGCAAGGCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTGTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCT-GGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGAGTTTCATGCAGCCTGTGGTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 148201 689 - 432965 ATGCTACA--CCGAAGCAGTGGAACATTAACCA-CGGCAAGGCCAGAATAAGTAACTACCTGCC------GAAGGTTACCCCAGCAG--CAGAGGGAGAGACCAGCCTTCCAAAAGATCTGGTTGAAAGTCCCTTCTTCCCTGAAATGC--CCAGGCCCAGTGTCTTCTGTCTAAACACACT-GGCTGTTTGGAAGCCTCTGAGCCTTGCCTGCTGGTCAGGTTCAAGGAAATGCTTGGAAATTTGAGAACCAGAGCATTGGCCTGGG-CTGTGGCTCTC-----GGCAGGGAGAGAC-GGCCGCCCAGAGCAGCGAGTGGCCAGGAA-GTGTA-----------TCCTAGCCCGCC-------CCCCATGTCCA--------------CCGCAGGACAGAGCTT-GGGCAGAAAGCACCTCAGCTTTAGGTGAATT-CGAGCTAGGACAAGTTCCGCGTTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCTTCCTCCAGAACGGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCCGCGTGGGCGGCGGGTACTCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCCTTCCTCTCTCCCCACCCAAGGCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTGTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCT-GGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGAGTTTCACGCAGCCTGTGGTCA i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 209700 698 + 85365473 ATGCTACAACCCCAAGCAGTGGAACATTAACCA-CGGCAAGGCCAGAATAAGTAACTACCTGCA------GAAGGTTACCCCAGCAG--CAGAGGGGGAGACCAGCCTTCCCAAAGATCTGGTGGAAAGTCCCTTCTTCCCCGAAATGTGGCCAGGCCCACTGTCTTCTGTCTAAACACACT-GGCTGTTTGGAAGCCTCTGAGCCTTGCCTGCTGGTCAGGTTCAAGGAAATGCATGGAAATTTGAGAACCAGAGCAGCAGCCTGGG-CTGTGGCTCTC-----GGCAGGGAAAGAC-GGCCGCCCAGAGCAGTGAGTGGCCAGGAA-GTGGA-----------TCCTAGCCCGCC-------TCCCATGTCCA--------------CCGCAGGACAGAGCTT-GGGCAGAAAGCACCTCAGCTTTAGGTGAATT-CGAGCTAGGACAAGTTCTGCGTTTCCCTCCAGCCCA----GCAGGCAGACAGAGGGTCTGTCCTTCCTCCAGAACGGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCCGCGTGGGCGGCGGGTCCTCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCTTTCCTCTCTCCCCACCCAAGGCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCT-GGGGAAGGTTCCTGACAGACTGGGCGTGTCTGTGATTTGATTTTCATGCAGCCTGTGGTCA i nomLeu3.chr20 M 100 C 0 s rheMac8.chr3 34058264 695 + 185818997 ATGCTACAACCCGAGGCAGTGGAACATTAACCA-CGGCAAGGCC-GGATAAGTAACTCCCTGCA------GAAGGTTACCCCAGCAG--CAGAGGG-GAGGCCAGCCTCCCAAAAGATCTCACTGCAAATCCCTTCTCCCCTGAAGTGTGACCAGGCCCAGTGCCTTCTGTCTGAACACACT-GGCTGTTTGGAAGCCTCTGAGCCCTGCCTGCTGGTCAGGTTCAAGGAAATGCTTGGAAATTTGAGAACCAGAGCAGCGGCCTGGG-CTGTGGCTCTCGGCAGGGCAGGGAGAGAC-GGCCACCCAGAGCAGTGAGTGGCCAGGAA-GTGGA-----------TCCTAGCCCCCC-------TCCCACGTCCA--------------CCGCAGGACAGAGCTT-GGGCAGAAACCTTCTCCACTTTAGGTGAATT-CGAGCTAGGACAAGTTCCACATTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCTTCCTCCAGTACCGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCTGCGTGGGCGGCGGGTCATCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCTTTCCTCTCTCCCCACCCAA-ACTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCC-AGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGATTTTCATGCAGTCTGCAGTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33676203 695 + 192294377 ATGCTACAACCCGAGGCAGTGGAACATTAACCA-CGGCAAGGCC-GGATAAGTAACTCCCTGCA------GAAGGTTACCCCAGCAG--CAGAGGG-GAGACCAGCCTCCCAAAAGATCTCACTGCAAATCCCTTCTCCCCTGAAGTGTGACCAGGCCCAGTGCCTTCTGTCTGAACACACT-GGCTGTTTGGAAGCCTCTGAGCCCTGCCTGCTGGTCAGGTTCAAGGAAATGCTTGGAAATTTGAGAACCAGAGCAGCGGCCTGGG-CTGTGGCTCTCGGCAGGGCAGGGAGAGAC-GGCCACCCAGAGCAGTGAGTGGCCAGGAA-GTGGA-----------TCCTAGCCCCCC-------TCCCACGTCCA--------------CCGCAGGACAGAGCTT-GGGCAGAAACCTTCTCCACTTTAGGTGAATT-CGAGCTAGGACAAGTTCCACATTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCTTCCTCCAGTACCGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCTGCGTGGGCGGCGGGTCATCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCTTTCCTCTCTCCCCACCCAA-ACTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCC-AGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGATTTTCATGCAGTCTGCAGTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4442501 695 - 9440265 ATGCTACAACCCGAGGCAGTGGAACATTAACCA-CGGCAAGGCC-GCATAAGTAACTCCCTGCA------GAAGGTTACCCCAGCGG--CAGAGGG-GAGACCAGCCTCCCAAAAGATCTCACTGCAAATCCCTTCTCCCCTGAAGTGTGACCAGGCCCAGTGCCTTCTGTCTGAACACACT-GGCTGTTTGGAAGCCTCTGAGCCCTGCCTGCTGGTCAGGTTCAAGGAAATGCTTGGAAATTTGAGAACCAGAGCAGCGGCCTGGG-CTGTGGCTCTCGGCAGGGCAGGGAGAGAC-GGCCACCCAGAGCAGTGAGTGGCCAGGAA-GTGGA-----------TCCTAGCCCCCC-------TCCCACGTCCA--------------CCGCAGGACAGAGCTT-GGGCAGAAACCTTCTCCACTTTAGGTGAATT-CGAGCTAGGACAAGTTCCACATTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCTTCCTCCAGTACCGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCTGCGTGGGCGGCGGGTCATCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCTTTCCTCTCTCCCCACCCAA-ACTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCC-AGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGATTTTCATGCAGTCTGCAGTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17032867 695 - 21915920 ATGCTACAACCCGAGGCAGTGGAACATTAACCA-CGGCAAGGCT-GGATAAGTAACTCCCTGCA------GAAGGTTACCCCAGCGG--CAGAGGG-GAGACCAGCCTCCCAAAAGATCTCACTGCAAATCCCTTCTCCCCTGAAGTGTGACCAGGCCCAGTGCCTTCTGTCTGAACACACT-GGCTGTTTGGAAGCCTCTGAGCCCTGCCTGCTGGTCAGGTTCAAGGAAATGCTTGGAAATTTGAGAACCAGAGCAGCGGCCTGGG-CTGTGGCTCTCGGCAGGGCAGGGAGAGAC-GGCCACCCAGAGCAGTGAGTGGCCAGGAA-GTGGA-----------TCCTAGCCCCCC-------TCCCACATCCA--------------CCGCAGGACAGAGCTT-GGGCAGAAACCTTCTCCGCTTTAGGTGAATT-CGAGCTAGGACAAGTTCCACATTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCTTCCTCCAGTACCGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCTGCGTGGGCGGCGGGTCATCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCTTTCCTCTCTCCCCACCCAA-ACTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCC-GGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGATTTTCATGCAGTCTGCGGTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 161708 696 - 21531802 ATGCTACAACCCGAGGCAGTGGAACATTAACCA-CGGTGAGGCC-GGAGAAGTAACTCCCTGCCCTCCCTGCAGGTTACCGCAGCGG--CAGAGGC-GAGACCGGCCTTCCAAAAGACCTCGCCGCAAGTCCCTTCTCCCCTGAAGTGTGACCAGGCCCAGTGCCTTCTGTCTGAACACACT-GGCTGTTTGGAAGCCTCTGAGCCTTGCCTGCTGGTCAGGTTCAAGGAAATGCTCGGAAATTTGAGAACCAGAGCAGCGGCCTGGG-CTGTGGCTCTC-----GGCAGGGAGAGAC-GGCCACCCAGAGCAGTGAGTGGCCAGGAA-GTGGA-----------TCCTAGCCCCCT-------TCCCACGTCCA--------------CGGCAGGACAGAGCTT-GGGCAGAAACCTCCTCAGCTTTAGGTGAATT-CGAGCTAGGACAAGTTCCACATTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCTCCCTCCAGAACCGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCTGCGTGGGCGGCGGGTCCTCCCTGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCTTTCCTCTCTCCCCACCCAA-GCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCC-GGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGATTTTCATGCAGTCTGCGGGCA i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 199708 695 - 2515279 ATGCTACAACCCGAGGCAGTGGAACATTAACCA-CGGCAAGGCC-GGATAAGTAACTCCCTGCA------GAAGGTTACCCCAGCGG--CAGAGGG-GAGACCAGCCCCCCAAAAGATCTCACTGCAAATCCCTTCTCCCCTGAAGTGTGACCAGGCCCAGTGCCTTCTGTCTGAACACACT-GGCTGTTTGGAAGCCTCTGAGCCCTGCCTGCTGGTCAGGTTCAAGGAAATGCTTGGAAATTTGAGAACCAGAGCAGCGGCCTGGG-CTGTGGCTCTCGGCAGGGCAGGGAGAGAC-GGCCACCCAGAGCAGTGAGTGGCCAGGAA-GTGGA-----------TCCTAGCCCCCC-------TCCCACATCCA--------------CCAAAGGACAGAGCTT-GGGCAGAAACCTTCTCCGCTTTAGGTGAATT-CGAGCTAGGACAAGTTCCACATTTCCCTCCAGCCCA----GCAGGCAGACGGAGGGTCTGTCCTTCCTCCAGTACCGTCCCTTGACCCCA-----GAGATGTGAGGACAGGCTGCGTGGGCGGCGGGTCATCCATGGGAGCCTGGGCTGGAGAGAGT-G-CTGCCTCTTTCCTCTCTCCCCACCCAA-ACTCCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCC-GGGGAAGGTTCCTGACAGACTGGGCGTGTCTG-----TGATTTTCATGCAGTCTTCGGTCA i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 89335 687 + 138751 ATGCTGCAACCCAAGGCAGTGGAAGATTAACCA-CAGCAAGGCCAGAATCAGTAACTACCTGC---------AGGTTACCTAAGCAG--CAGAGGG-GAGACCAGGCTTCCAAAAGATCTCACTGAAAGTCCCTTCTCCCCTGAAATGTGACCAAGCCTGGTGTTCTCTGTCTAAACACACC-AGCTGTTTGGAAGCCTCTGAGCCTTGCTT----------------GAAATGCTCAGAAACTTGAGAACCAGAGCTGCAGCCTGGG-CTGTGGCTCTG-----GGCTGGGAGAGAC-GTCTGCCCAGAGCAGCCAGTGGCCAGGGAAGTGGA-----------CCCTAGCCCACC--------CTTGTGTCCAGGCTAGGGTCCTGGACACA-GACAGAGCTG-GGGCAGAAACCACCTCAGCTTTAGGCAAATT-CCAGCTAGGACAAGTTCTCCGTTTCCCTGCAGCCCAGCAGGCAGGCAGACAGA--GTCTGTCCTTCCTCCAGAATGCTCCCTTGACCCCA-----TAGATGAGAGGACAGGCCACGTGGGCTGCGGGTCCTCCATGGGAGCCTGGACTGGAGAGAAT-G-CTGCCTTTTTCCTCTCTCCCCACCCAAGGCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCC--AGGAAGGATCGGGACAGACTGGGCGTGTCTG-----TGATTTTCATGCAGTCCATGGTCA i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 401750 668 - 2409723 ATGCTGCAACCCAAGGCAGTGGAAGATTAACCA-CAGCAAGGCCAGAATCAGTAACTACCTGCA------GAAGGTTACCTAAGCCG--CAGAGGG-GAGACCAGGCATCCAAAGGATCTCGCTGAAGGTCCCTTCTCCCCTGAAATGTGACCAAGCCTGGTGTCCTCTGTCTAAACACACC-GGCTGTTTGGAAGCCTCTGAGTTTTGCCT----------------GAAATGCTTGGAAACTTGAGAACCAGAGGAGCAGCCTAGG-CTGTGGCTCTG-----GGCTGTGAGAGAT-GGCCACCCAGAGCAGCGAGTGGCCGGGGAGATGGA-----------CCCTAGCCCGCC--------C-CGTGTCCA--------------ACGCAGGACAGAGCTA-GGGCAGAAACCACCTCCACTTTAGTTGAATT-CGAGCTAAGACAAGTTCTCAGTTTCCCT------------GCAGGCAGACAGA--GTCGGTCCTTCCTCCAGAATGCTCCCTTGACCCCAGAGACGAGATGAGAGGACAGGCCATGTGGGCAGCGGGTCCTCCATGGGAGCCTGGGCTAGAGAGAAC-G-CTGCCTCTTTTCTCTCTCCCCA-CCAAGGCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCC--GGGAAGGATCGGGACAGACTGGGCGTGTCCG-----TGATTTTCATGCAGTCCATGGTCA i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 563456 673 - 2125214 ATGCTGCAACCCAAGGCAGTGGAAGATTAACCA-CAGCAAGGCCAGAATCAGTAACTACCTGCA------GAAGGTTACCTAAGCAG--CAGAGGG-GAGACCAGGCTTCCAAAAGATCTCGCTGAAAGTCCCTTCTCCCCTGAAATGTGACCAGGCCTGGTGTCTTCTGTCTAAACACACT-GGCTGTTTGGAAGCCTCCGAGCCTTGCCT----------------GAAATGCTCGGAAACTTGAGAACCAGAGCAGCAGCCTAGG-CTGTGGCTTTG-----GGCTGGGAGAGAC-GACCACCCAGAGCAGCGAGTGGCCAGGGAGGTGGA-----------CCCTAGCCCGCC--------CTCGTGTCCA--------------CCGCAGGACAGAGCCA-GGGCAGAAACCACCTCTGCCTTAGTTGAATT-TGAGCTAGGACAAGTTCTCCGTTTCCCTGCAACCCA----GCAGGCAGACAGA--GCCTGTCCTTCCTCTAGAATGCTCCCTTGACCCCA-----GAGATGAGAGGACAGGCCACGTGGGTGGCGGGTCCTCCATAGGAGCCTGGGATAGAGAGAAT-G-CTGCCTCTTTCCTCTCTCCCCACCCAAGGCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTTGTTGGAACAAAAGCAGAGAGCC--GGGAAGGATCGGGACAGACTGGGCGTGTCTG-----TGATTTTCATGCAGCCCATGGTCA i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 156108 676 + 376347 ATGCGGCAACCCAAGGCAGTGGAAGATTAACCG-CAGCAAGGCCAGGTTCGGTGACGACCTGCA------GAAGGCAGCCTAAGCAG--CAGAGGG-GAGCCCAGCCTTCCAAAAGGCCTCGCTGAAAGTCCCCTCTACCCTGAAGTGTGACCGGGCCTGGTGTCTTCTGTGTAAACACACC-GGCTGTTTGGAAGCCTCTGAGCCTTGCCT----------------GAAATGCTCGGAAACTTGAGAACCAGAGCAGCGGCCTGGG-CTGTGGCTCTG-----GGCTGGGAGAGAC-GGCCGCCCAGAGCAGCGAGTGGCCAGGGA-GTGGA-----------CCCCAGCCCGCC--------CTTGTGTCCA--------------CCGCAGGACGGAGCTA-GGGCAGAAACCACCTCAGCTTTAGGAGAATT-TGAGCTAGGACAAGGTCCCCGTTTCCCTGCCGCCCAGCAGGCAGACAGACAGA--GCCTGTCCTTCCTCCAGAATGCTCCCTTGGCCCCA-----GAGATGAGAGGACACGCCACGTGGACGGCGGGTCCTCCATGGGAGCCTGGGCTAGAGAGAAT-G-CTGCCTCTTTCCTCTCTCCCCACCCAAGGCTGCTCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCTGCCCCTGGTCGTTGGAACAAAAGCAGAGAGCT--GGGAAGGATCGGGACAGACTGGGCGTGTCAG-----TGATTTTCATGCAGTCCATGGTCA i aotNan1.NW_018514293v1 C 0 I 8 s otoGar3.GL873611 2289856 682 - 8137123 ATGCTGCAACCCAGAATAGTGAAATATTAACCACCAGCAAGGCCAGGATAAATAACTACCTGCA------AAAGGTTACCCAAGCAA--CAGAGGGGAAGGCCAGGCTTCCCAAACATC--ATTGGAAATCCTTTCTCTCCTGAAATTTGACCAGGCCCAGTGTTTTCTGTCTAAATATGCCAGGCTGTTTGGTAGCCTCTGAGCTTTGTCTGCTGGCCAGGCTCAAGGAAATGCTCAGAAACTTGAGAATCAGAGCAGTGGCCCAAGCCTGTGGCTCTC------ACAGGGAATGATGGGCTGCCCAGAGTGGT------CAAGGAA-GTGGAGCCTGGGAGGCTTCTAGCCCACT-------CTTCCTGTCCA--------------TTGCAGGACAAGACTT-GGACCAAAAGGGTCTTAGCTGCAGGTGAATTAAGAGCTGTAATAAGATCTGC-TTTTCTTCCAGGCCA----GCAGGCAGATGGAGGGTCTGTCCTTCCTCTAGAACTGTCCCTCATCCCCC-----GAGATGTGAGGGAAGGCCATGTGGGCAGCAGGCCCTTAATTTGAACCTGGGCTGGAGAGAATGG-CTGCCTCTTTCCTCTCTCCCCACCCAG-ACTGCCCTCATTAAAATCAAATTTAGCCTCTTGCATCA-TTCCAACCCAGGTTGTTGGAACAAAAGCAGAGAGCCTGGGCAAGGTTTCTGACAGACTGGGCGTGTCTG-----TG------------------GTCA i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61078211 668 - 77573801 ATGCTACAGCCCAGAGTAGTGAAATATTAACTAGCAGCAAGGCCAGAATAAATACCTACCTGCA------AAAGGTTACCCAAGGAACTCAGGGGG-AAGGCCAGCTTTCCAAAACATCTTA-TAAAAATCCTTTCTACCCTGAAATTTGACCAGGCCCAGGCTTTTCTGTCTAAATACACCAAGGTGCTTGGTGGCCTCTGAGCTTTGTCTGCTGGCCAGGTTCAAGGAAATGCTTAGAAACTTGAGAATCAGAGCAGTGACCTAGGCCTGGGGCTCTT------CCCAGGAGAGAC-AG---CCCAGGGCTG---GGGGTCAGTGATGTGGC---------------------CT--------------------------------CTGGAGGACAGGACCCGGGGCCAGAAGGGCCTCATCCGTAGGTGAATT-AGAGTTAAGACAGGTTCCAC-TTTCCCTCCAGCCCA----GCCG-CAAATAGG--CTCTGTCCTCCC-CCAGACTGGCCCCTCAACTCCA-----GAGATGTGAGGAGGGGCCACGTGGGCGGCAGGTCCTCACTTTGGGCCTCAGCTGGAGTGAGT-GCCTGACTCTTTCCTCTCTCCCCACCCAAGACTGCTCTCGTTAAAATCAAATTTAGCTTCTTGCATCATTTCTACACTTGGTTGTTGGAACCAAAACAGAGCGTCCAGGGAAGGTTTCTGACAGGCGGGGCGTGTCTG-----TGATGTGCACACAGCTCGTGGTCA i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M a score=106924.000000 s hg38.chr7_KI270899v1_alt 187471 25 + 190869 ATGGTAGGTTCTCCCCTCTACTCC-A s panTro5.chr7_NW_015973580v1_random 62831 25 - 83720 ATGGTAGGTTCCCCCCTCTACTCC-A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 577228 25 + 162613886 ATGGTAGGTTCCCCCCTCTACTCC-A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 148890 25 - 432965 ACGGTAGGTTCTCCCCTCTACTCC-A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 210398 26 + 85365473 ATGGTGGGTTCTCTCCTCTACTCCAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34058959 25 + 185818997 ATGGTAGGTTCTCCCCTCTACTCC-A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33676898 25 + 192294377 ATGGTAGGTTCTCCCCTCTACTCC-A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4443196 25 - 9440265 ATGGTAGGTTCTCCCCTCTACTCC-A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17033562 25 - 21915920 ATGGTAGGTTCTCCCCTCTACTCC-A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 162404 25 - 21531802 ATGGTAGGTTCTCCCCTCTACTCT-G i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 200403 25 - 2515279 ATGGTAGGTTCTCCCCTCTACTCC-A i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 90022 8 + 138751 ----------------ACTACTCT-- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 402418 8 - 2409723 ----------------ACTACTCT-- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 564129 8 - 2125214 ----------------ACTATTCT-- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2290538 24 - 8137123 -AGACAGGTTTTCTTCTCTGCTCA-C i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61078879 24 - 77573801 -AAGATGGCTTGCTTGTCTGCCCC-C i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M e aotNan1.NW_018514293v1 156784 8 + 376347 I a score=488506.000000 s hg38.chr7_KI270899v1_alt 187496 55 + 190869 GGGGAGGGCCA-CAGCCCCTCGCACCCTCAGCTGAGGTCA---TG---GTTGGGCCATTTCG s panTro5.chr7_NW_015973580v1_random 62856 55 - 83720 GGGGAGGGCCA-CAGCCCCTCGCACCCTCAGCTGAGGTCA---TG---GTTGGGCCATTTCG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 577253 55 + 162613886 GGGGAGGGCCA-CAGCCCCTCGCACCCTCAGCTGAGGTCA---TG---GTTGGGCCATTTCG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 148915 55 - 432965 GGGGAGGGCCA-CAGCCCCTCGCACCCTCAGCTGAGGTCA---TG---GTTGGGCCATTTCG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 210424 55 + 85365473 GGGGAGGGCCA-CAGCCCCTAGCACCCCCAGCTGACGTCA---TG---GCTGGGCCACTTCG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34058984 56 + 185818997 AGGGAGAGCCAGCAGCCCCTGGTACCCCCAGCTGACATCA---TG---GTGGGGCCATTTCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33676923 56 + 192294377 AGGGAGAGCCAGCAGCCCCTGGTACCCCCAGCTGACATCA---TG---GTGGGGCCATTTCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4443221 56 - 9440265 AGGGAGAGCCAGCAGCCCCTGGTACCCCCAGCTGACATCA---TG---GTGGGGCCATTTCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17033587 56 - 21915920 AGGGAGAGCCAGCAGCCCCTGGTACCCTCAGCTGACATCA---TG---GTGGGGCCATTTCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 162429 56 - 21531802 AGGGAGAGCCAGCAGCCCCTGGTCCCCTCAGCTGACATCG---TG---GTGGGGCCATTTCG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 200428 56 - 2515279 AGGGAGAGCCAGCAGCCCCTGGTACCCCCAGCTGACATCA---TG---GTGGGGCCATTTCG i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 90030 56 + 138751 GGGGAGGGCCGTCAACCCCTTGCACTTACAGCTGACATCA---TT---GTTGGGCCATTTCG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 402426 56 - 2409723 GGGAAGGGCCGTCAACCCCTCGCACCCCCAGCTGACATCA---TT---GTTGGGCCATTTCG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 564137 56 - 2125214 GGGGAGGGCCATCAACCCCTCGCACCCCCAGCTGACATCA---TT---GTTGGGCCATTTTG i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 156792 56 + 376347 GGGGAGGGCCGTCGACCCCTCGCACCCCCAGCTGACATCA---TC---GTTGGGCCGTTTCG i aotNan1.NW_018514293v1 I 8 C 0 s otoGar3.GL873611 2290562 59 - 8137123 AGGGAGGGCTGAGAGCCCCTAACACCCCCAGATGACATCA---TACTTGCTGGACAGTTTTG i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61078903 59 - 77573801 AGGAAGAAGTGACAGCCTCCCATACCCCAAGCTGACATAACACTT---GTTGGGCTGTTTTC i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 351615 3415 + 6586416 M a score=1973831.000000 s hg38.chr7_KI270899v1_alt 187551 173 + 190869 GTGACCCTGGGACAGACGTGGCGGGGATGGCAGGGCAGCGCTGACGTCCTGGAATTAGTTTTGCTGTAGTTAGAGCTGTCTGTGGTGTCTCCAGAGGGTGAGTAAGAATTACAGGCCTTTCACCGTGTTATTAGTTGGCAGCCGAGCGGCCACAGAAGAAAGCGCAGACGTTG-- s panTro5.chr7_NW_015973580v1_random 62911 173 - 83720 GTGACCCTGGGACAGACGTGGCGGGGATGGCAGGGCAGCGCTGACGCCCTGGAATTAGTTTTGCTGTAGTTAGAGCTGTCTGTGGCGTCTCCAGAGGGTGAGTAAGAATTACAGGCCTTTCACCGTGTTATTAGTTGGCAGCCAAGCGGCCACAGAAGAAAGCGCAGACGTTG-- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 577308 173 + 162613886 GTGACCCTGGGACAGACGTGGCGGGGACGGCAGGGCAGCGCTGACGCCCTGGAATTAGTTTTGCTGTAGTTAGAGCTGTCTGTGGCGTCTCCAGAGGGTGAGTAAGAATTACAGGCCTTTCACGGTGTTATTAGTTGGCAGCCAAGCGGCCACAGAAGAAAGCGCAGACGTTG-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 148970 172 - 432965 GTGACCCTGGGACAGACGTGGCGGGGACGGCAGGGCAGCGCTGACGTCCTGGAATTAGTTTTGCTGTAGTTAGAGCTGTCTGTGGCGTCTCCAGAGGGTGAGTAAGAATTACAGGCCTTTCACC-TGTTATTAGTTGGCAGCCGAGTGGCCACAGAAGAAAGCGCAGACGTTG-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 210479 172 + 85365473 GTGACCCCGGGATAGACGTGGC-GGGACAGCAGGGCAGCGCTGACGTCCTGGGATTAGTTTTGCTGTAGTTAGAGCTGTCTGTGGTGTCTCCAGAGGGTGAATAAGAATTACAGGCCTTTCACCATGTTATTAGTTGGCAGCAGAGCAGCCACAGAAGAAAGCGCAGACGTTG-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34059040 173 + 185818997 GTGACCCCGGGACAGACATGGCGGGGACGGCAGGGCAGTGCTGACGTCCTGGGATTAGTCTTGCTGTAGTTATAGCTGTCTGTGGCATCTCCAGAGGGTGAATAAGAATTACAGGCCTTTCACCGTGTTATTAGCTGGCAGCAGAGCAGCCACAGAAGAAAGTGCAGACATTG-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33676979 173 + 192294377 GTGACCCCGGGACAGACATGGCGGGGACGGCAGGGCAGTGCTGACGTCCTGGGATTAGTCTTGCTGTAGTTATAGCTGTCTGTGGCATCTCCAGAGGGTGAATAAGAATTACAGGCCTTTCACCGTGTTATTAGCTGGCAGCAGAGCAGCCACAGAAGAAAGTGCAGACATTG-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4443277 173 - 9440265 GTGACCCCGGGACAGACGTGGCGGGGACGGCAGGGCAGTGCTGACGTCCTGGGATTAGTCTTGCTGTAGTTATAGCTGTCTGTGGCATCTCCAGAGGGTGAATAAGAATTACAGGCCTTTCACCGTGTTATTAGCTGGCAGCAGAGCAGCCACAGAAGAAAGTGCAGACATTG-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17033643 173 - 21915920 GTGACCCCGGGACAGACGTGGCGGGGACGGCAGGGCAGTGCTGACGTCCTGGGGTTAGTCTTGCTGTAGTTATAGCTGTCTGTGGCATCTCCAGAGGGTGAATAAGAATTACAGGCCTTTCACCGTGTTATTAGCTGGCGGCAGAGCAGCCACAGAAGAAAGTGCAGATATTG-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 162485 172 - 21531802 GTGACCCCGGGGCAGACGTGGTGGGGACGGCAGGGCAGTGCTGACGTCCTGGGATTAGTCTTGCTGTAGTTATA-CAGTCTGTGGCATCTCCAGAGGATGAATAAGAATTACAGGCCTTTCACCGTGTTATTAGCTGGCAGCAGAGCAGCCGCAGAAGAAAGTGCAGACATTG-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 200484 173 - 2515279 GTGACCCCAGGACAGACGTGGCGGGGACGGCAGGGCAGTGCTGACGTCCTGGGATTAGTCTTGCTGTAGTTATAGCTGTCTGTGGCATCTCCAGAGGGTGAATAAGAATTACAGGCCTTTCACCGTGTTATTAGCTGGCAGCAGAGCAGCCACAGAAGAAAGTGCAGACATTG-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 355164 173 + 6586416 GTGACCCCGGGACAGACGTGGCGGGTTCGGCAGGGCAGCGCTGACGTCCTGGGATTAGTCTTGCTGTAGTTATAGCTGTCTGTGGCAGCTCCAGAGGGTGAATAAGAATTACAGGCCTTTCACCGTGTTATTAGCTGGCAGCAGAGCAGCCACAGAAGAAAGCGCAGACACTG-- i colAng1.NW_012117710v1 M 3415 C 0 s calJac3.chrUn_GL286444 90086 173 + 138751 GTGACCCTGGGACAGACGTGGCGGAGATGGCAGGGCAGCACTGATGCCCTGGGATTAGTCTTGCTGTAGTTATAGCTGTCTGTGGCGTCTCTAGAGGGTGAATAAGAATTACAGGCCTTTTGCTGTGTTATTAGTTGGCGGAAGAGCAGCCACAGAAAAAAGTGCAGGTATTG-- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 402482 173 - 2409723 GTGACCCCGGGACAGACGTGGCAGAGATGGCAGGGCAGCACTGATGCCCTGGGATTAGTCTTGCTGTAGTTATAGCTGTCTGTGGCGTCTCTAGAGGGTGAATAAGAATTACAGGCCTTTTGCTGTGTTATTAGTTGGCAGAAGAGCAGCCACAGAAAAAAGTGCAGGCATTG-- i saiBol1.JH378296 C 0 I 310 s cebCap1.NW_016107703v1 564193 173 - 2125214 GTGACCCTGGGACAGACGTGGCGGAGATGGCAGGGCAGCACTGATGCCCTGGGATTAGTCTTGCTGTGGTTATAGCTGTCTGTGGCGTCTCTAGAGGGTGAATAAGAATTACAGGCCTTTTGCTGTGTTATTAGTTGGCGGAAGAGCAGCCACAGAAAAAAGTGCAGGCATTG-- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 156848 172 + 376347 GTGACCCCGGGACAGACGTGGCGGAGACGGCAGGGCAGCACCGATGCCCCGGGATTAGTCTTGCTGTAGTTATAGCTGTCTGCGGCGTCTCTAGAGGGCGAATAAGAATTACAGGCCTTTTGCTGTGTTATTAGTTGGCGGAAGAGCAGCCACAG-GAAAAGTGCAGGCATTG-- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2290621 171 - 8137123 GTGACCCCAGGACAGATGTGGCAAGG-CAGTGGGATAATGTTAACATTTTGGGGTTAGTCTTGCTACA-TTATAGCTATCCCTGGCATCTCCCAAGTGTAAATAAGAATTATAGGCCCTTAGAGGTGTTATTAGTTGGTAGAACAACAGCTATAGAAGAAAGTGCAGACATCG-- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61078962 163 - 77573801 GTGACCCCAGGACAGACGCGGTAGGGCCTG-------GCACTGATGTTCTGGGCTCAGTCTTGATTTAGTTATAGCTGTCTG-GGCGTCTCCCGAGGGTAAGTAAGAATTACAG---TTTAGATATGTTATTAGTTAGTAGAACAACAGCCGCGGAA-AAAGTACAGGGTGTCCG i canFam3.chr6 C 0 C 0 a score=14590487.000000 s hg38.chr7_KI270899v1_alt 187724 1446 + 190869 CAGGGCCCTCTTTAAGCAGAGGCGCCTTCAAC-ACATCTGCACTTGCTTGAACCCAAAGTTAAAAACACTGGCGTCGGTGCC---CTCT-CCCC---GTCATCCGA--CTCACGGGCCTGTTCTTTCCATGCTGA----TGTTCGTCCTCGCTGCTCCCTGCAGGCCGCATGCGGGTGCTGAAGGTGCAGAATTCCTCTCCCCCGGGGAGGCGGCCGTGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGTATCAACCGGTACGAGCTGTACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GTGCACTC-AGGGCCGTCTGTGTGCCGGCTGTG--TGGCATCAGGGCTGCT-----GGGGCAGGCTATGTGTTAGA-GAGGTCTGGGAGGC-------CGTTGCTCATTACGGCAGCGTC-ACCTCCTGCAGCAATCTGCACGGGCAGC---GAGG-----AGGGACAGAGGGCTC------GCGTCTCGTGTGCTCTCA-CACTGGATGTGCTCCTGATCTG-----------CCGCACGATGAGCGGG---GAGACGCCTGGACAGCCGGTCCACTGCGCTCTGCGTCCTCACCT---GGGTGGTCCCGG--GGGTGCCAACTGGATGACAGAGTCCTTCCCTCCTGGGGTAGAGGAATAGAGGGGTATCTCTGGCGGCGGTGACCCCTCCACCGGAAGCGTGTGCATGGAACTCTC---CTGCTTTTCTACACACGACCCTGGCTGGGTGGGGAGACAG----------CCATGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGACCTCAGCAAGGCGCTGTG------------------CAGTTTCATACTGAGGAGACATAGGCAGGGCT----------C---------AGGACGGAGGCCTGGGCCTCCCAGATGGAGGAGTTTGAAGGCAACATCTCCAGGTACTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCCAGTTGCTGATTTCAGGAAAATATGCCA-CTGCAGCTTCTGAGCGTGGAGGTTTGGTGCCATTGTTCTC-A-GCTTGTAGGCGATTGTTTGTGAAGGT-CC-CATTTGTCACCAGT-GCTT-GGAGAGGTAGTGAGGGCGGGGCTGAGGCCCTTTAGTGGGAGCAGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACAGCTGTGGGCAGGTGCAGAGG---------CCATGAC-AGCCTGAAGGCAGGGCTTTCTTTGCGCTGTGTGATGAGGCCAGCAGTCCCAGGCATTAGCTTCATGTGTGTCTCAGAAGCAACCTTGGTGCTGAAAGGGTCCCAGCAGCCTGGGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCCCCTTTCAGGCCAG-CAGGTAGGTTCTCCTGAGCTCTTCGG-GGCTGTTTCTGGCTCTCTCTGCCGGGTGCTGAGTTGTTTGCTGGGCACTCACCTGGTCATGGGGAGACA----GAACTTGCAGCTCTCTCCCCAC s panTro5.chr7_NW_015973580v1_random 63084 1446 - 83720 CAGGGCCCTCTTTAAGCAGAGGCGCCTTCAAC-ACATCTGCACTTGCTTGAACCCAAAGTTAAAAACCTTGGCGTCGGTGCC---CTCT-CCCT---GTCATCCGG--CTCACGGGCCTGTTCTTTCCGTGCTGA----TGTTCGTCCTCGCTGCTCCCTGCAGGCCGCATGCGGGTGCTGAAGGTGCAGAATTCCCCTCCCCCGGGGAGGCGGCCGTGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGTATCAACCGGTACGAGCTGTACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GTGCACTC-AGGGCCGTCTGTGTGCCGGCTGCG--TGGCGTCAGGGCTGCC-----GGGGCAGGCTGTGCGTTAGA-GAGGTCTGGGAGGC-------CATTGCTCATTACGGCAGCGTC-ACCTCCTGCAGCGATCTGCACGGGCAGC---GAGG-----AGGGACAGAGGGCTC------GCGTCTCGTGTGCTCTCA-CACTGGACGTGCTCCTGATCTG-----------CCGCACGATGAGCGGG---TAGACGCCTGGACAGCCGGTCCACTGCGCTCTGCGTCCTCACCT---GGGTGGTCCCGG--GGGTGCCAACTGGATGACAGAGTCCTTCCCTCCTGGGGTAGAGGAATAGACGGGTATCTTTGGCGGCGGTGACCCCTCCACCGGAAGCGTGTGCATGGAACTCTC---CTGCTTTTCTGCACACGACCCTGGCTGGGTGGGGAGACAG----------CCATGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGACCTCAGCAAGGCACTGTG------------------CAGTTTCATACTGAGGAGACATAGGCAGGGCT----------C---------AGGACGGAGGCCTGGGCCTCCCGGATGGAGGAGTTTGAAGGCAACATCTCCAGGTACTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCCAGTTGCTGATTTCAGGAAAATATGCCA-CTGCAGCTTCTGAGCGTGGAGGTTTGGTGCCATTGTTCTC-A-GCTTGTAGGCGATTGTTTGTGAAGGT-CC-CATTTGTCACCAGT-GCTT-GGAGAGGTAGTGAGGGCGGGGCTGAGGCCCTTTAGTGGGAGCAGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACAGCTGTGGGCAGGTGCAGAGG---------CCATGAC-AGCCTGAAGGCAGGGCTTTCTTTGCGCTGTATGATGAGGCCAGCAGTCCCAGGCATTAGCTTCATGTGTGTCTCAGAAGCAACCTTGGTGCTGAAAGGGTCCCAGCAGCCTGGGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCCCCTTTCAGGCCAG-CAGGTAGGTTCTCCTGAGCTCTTCGG-GGCTGTTTCTGGCTCTCTCTGCCGGGTGCTGAGTTGTTTGCTGGGCACTCACCTGGTCATGGGGAGACA----GAACTTGCAGCTCTCTCCCCAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 577481 1446 + 162613886 CAGGGCCCTCTTTAAGCAGAGGCGCCTTCAAC-ACATCTGCACTTGCTTGAACCCAAAGTTAAAAACCTTGGCGTCGGTGCC---CTCT-CCCT---GTCATCCGG--CTCAGGGGCCTGTTGTTTCCGTGCTGA----TGTTCGTCCTCGCTGCTCCCTGCAGGCCGCATGCGGGTGCTGAAGGTGCAGAATTCCCCTCCCCCGGGGAGGCGGCCGTGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGTATCAACCGGTACGAGCTGTACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GTGCACTC-AGGGCCGTCTGTGTGCCGGCTGCG--TGGCGTCAGGGCTGCC-----GGGGCAGGCTGTGCGTTAGA-GAGGTCTGGGAGGC-------CGTTGCTCATTACGGCAGCGTC-ACCTCCTGCAGCGATCTGCACGGGCAGC---GAGG-----AGGGACAGAGGGCTC------GCGTCTCGTGTGCTCTCA-CACTGGACGTGCTCCTGATCTG-----------CCGCACGATGAGCGGG---TAGACGCCTGGACAGCCAGTCCACTGCGCTCTGCGTCCTCACCT---GGGTGGTCCCGG--GGGTGCCAACTGGATGACAGAGTCCTTCCCTCCTGGGGTAGAGGAATAGACGGGTATCTTTGGCGGCGGTGACCCCTCCACCGGAAGCGTGTGCATGGAACTCTC---CTGCTTTTCTGCACACGACCCTGGCTGGGTGGGGAGACAG----------CCATGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGACCTCAGCAAGGCACTGTG------------------CAGTTTCATACTGAGGAGACATAGGCAGGGCT----------C---------AGGACGGAGGCCTGGGCCTCCCGGATGGAGGAGTTTGAAGGCAACATCTCCAGGTACTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCCAGTTGCTGATTTCAGGAAAATATGCCA-CTGCAGCTTCTGAGCGTGGAGGTTTGGTGCCATTGTTCTC-A-GCTTGTAGGCGATTGTTTGTGAAGGT-CC-CATTTGTCACCAGT-GCTT-GGAGAGGTAGTGAGGGCGGGGCTGAGGCCCTTTAGTGGGAGCAGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACAGCTGTGGGCAGGTGCAGAGG---------CCATGAC-AGCCTGAAGGCAGGGCTTTCTTTGCGCTGTGTGATGAGGCCAGCAGTCCCAGGCATTAGCTTCATGTGTGTCTCAGAAGCAACCTTGGTGCTGAAAGGGTCCCAGCAGCCTGGGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCCCCTTTCAGGCCAG-CAGGTAGGTTCTCCTGAGCTCTTCGG-GGCTGTTTCTGGCTCTCTCTGCCGGGTGCTGAGTTGTTTGCTGGGCACTCACCTGGTCATGGGGAGACA----GAACTTGCAGCTCTCTCCCCAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 149142 1440 - 432965 CAGGGCCCTCTTTAAGCAGAGGCGCCTTCAAC-ACATCTGCACTTGCTTGAACCCAAAGTTAAAAACCTTGGCGTCGGTGCC---CTCT-CCCC---GTCATCCGG--CTCACGGGCCTGTTC-TTCCGTGCTGA----TGTTCGTCCTCGCTGCTCCCTGCAGGCCGCATGCAGGTGCTGAAGGTGCAGAATTCCTCT-CCCCGGGGAGGCGGCCGTGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGTATCAACCGGTACGAGCTGTACTCCAGACACAACCCGGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GTGCGCTC-AGGGCCGTCTGTGTGCCGGCTGTG--TGGCGTCAGGGCTGCC-----GGGGCAGGCTGTGCGTTAGA-GAGGTCTGGGAGGC-------CTTCGCTCATTACGGCAGCGTC-ACCTCCTGCAGCGATCTGCACGGGCAGC---GAGG-----AGGGACAGAGGGCTC------GCGTCTCGTGTGCTCTCA-CACTGGATGTGCTCCTGATCTG-----------CCGCACGATGAGCGGG---CAGACGCCTGGACAGCCTGTCCACTGCGCTCTGCGTCCTCACCT---GGGTGGTCCCGG--GGGTGCCAACTGGATGACAGAGTCCTTCCCTCCTGGGGTAGAGGAATAGAGGGGTATCTTTGGCGGCGGTGACCCCTCCAGCGGAAGCGTGTGCATGGAACTCTC---CTGCTTTTCTGCACACGACCCTGGCTGGGTGGGGAGACAG----------CCATGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGACCTCAGCAAGGCGCTGTG------------------CAGTTTCATACTGAGGAGACATAGGCAGGGCT----------C---------AGGACGGAGGCCTGGGCCTCCCGGATGGAGGAGTTTGAAGGCAACATCTCCAGGTACTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCCAGTTGCTGATTTCAGGAAAATATGCCA-CTGCAGCTTCTGAGCGTGGAGGTTTGGTGCCATTGTTCTC-A-GCTTGTAGGCGATTGTTTGTGAAGGT-CC-CATTTGTCACCAGT-GCTT-GGAGAGGTAGTGAGGGCGGGGCTGAGGCCCTTTAGTGGGAGCAGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACAGCTGTGGGCAGGTGCAGAGG---------CCATGAC-AGCCTGAAGGCAGCG----CTTTGCGCTGTGTGATGAGGCCAGCAGTCCCAGGCATTAGCTTCATGTGTGTCTCAGAAGCAATCTTGGTGCTGAAAGGGTCCCAGCAGCCTGGGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCCCCTTTCAGGCCAG-CAGGTAGGTTCTCCCGAGCTCTTCGG-GGCTGTTTCTGGCTCTCTCTGCCGGGTGCTGAGTTGTTTGCTGGGCACTCACCTGGTCATGGGGAGACA----GAACTTGCAGCTCTCTCCCCAC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 210651 1444 + 85365473 CAGGGCCCTCTTTAAGCAGAGGCACCTTTGAT-ACATCTGCACCTGCTTGAACCCACAGTTGAAAACCTTGGCGTCGGTGGC---CTCT-CCCC---GTCATCCGG--CTCACGGGCCTGTTCTTTCCGTGCTGA----TGTTCGTCTTCGCTGCTCCCTGCAGGCCGCATGCGGGTGCTGAAGGTGCAGAATTCCTCTCCACCGGGGAGGCGGCCGTGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGCATCAACCGGTACGAGCTGTACTCCAGACACAACCCAGCCATCGAGGCCCTGCTGCATGACCTCAGCTCCCAGAAGATCACCAGCGTGGGTAGGTGTCCTTGG-GTGCACTCGAGGGCCGTCTGTGTGCCGGCTGTG--TGGCGTCAGGGCTGCC-----GGGGCAGGCTACGTGTTAGA-GAGGTCTGGGAGGC-------CGTTGCTCATTACGGCAGCGTT-ACCTCCTGCAGCGATCTGCGCGGGCAGC---GAGG-----AGGGACAGAGGGCTC------GCGTCTTGTGTGCTCTCA-CACTGGACGTGCTCCTGATCTG-----------CTGCACGATGACCTGG---GAGACGCCTGGACAGCCCGTCCACTGCGCCCTGCCTCCTCA-CT---GGGTGGTCCTGG--GGGTGCCAACTGGACGACAGAGTCCTTGCCCCCTGAGGTAGAGGAATACAGGGGTATCCTTGGTGGCGGTGACCCCTCCACTGGGAGCGTGTGCATGGAACTCTC---CTGCTTTTCTGCACACGGCCCTGGCTGGGTGGGAAGACAG----------CCCTGAGCCTGCCTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGAGCTCAGCAAGGCGCTGTG------------------CAGTTTCATACTGAAGAGATGTAGGCAGGGCT----------C---------AGGATGGAGGCCTCGGCCTCCCGGATGGAGGAGTTTGAAGGCAACATCTCCAGGTACTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCTAGTTGCTGATTTCAGGAAAATATGCCA-CTGCAGCTTCTGAGCGTGGAGGTTTGGTGCCATTGTTCTC-A-GCTTGTAGGCGATTGTGTGTGAAGGT-CC-CATTTGTCACCAAT-GCTT-GGAAAGGCAGTGAGGGCAGGGCTGAGGCCCTTTGATGGGAGCAGCTGCTCCC-CAGGGA--TTGCAGGGAGTGGGCCTGGGTGCGCACAGCTGTGGGCAGGTGCAGAGG---------CCATGAG-AGCTTGAAGGCAGGGCTTTCTTTGAGCTGTGTGATGAGGCCAGCAGTCCCAGGCATTAGCTTCATGTGTGTCTCAGAAGCAACCCTGGTGCTGAAAGGGTCCCAGCAGCCTGGGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCCCCTTTCAGGCCGG-CAGGTAGGCTCTGCAGAGCTCTTCGG-GGCTGTTTCTGGCTCTCTCTGCCAGGTGCTGAGTTGTTTGCTGGGCACTCACCTGGTCCTGGGAAGACA----GAACTTGCAG--CTCTCCCCAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34059213 1453 + 185818997 CAGGGCCCTCTTTAAGCAGAGGCACCTTCCACAACATCTGCACTGACTTGAACCCAGAGTTAAAAACATTGGCGTCGGTGGC---CTCTCCCCC---GTCATCCGG--CTCACGGGCCTGTTCCTTCTGTGCTGA----TGTTCATCCCCGCTGCTCCCTGCAGGCCACATGTGGGTGCTGAAGGTGCAGAATTCCTCTCCACCGGGGAGGCAGCCGCGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGCATCAACCGGTACGAGCTGTACTCCAGACACAACCCAGCCATCGAGGCCCTGCTGCATGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GCGCACTTGAGGGCCATCTGTGTGCCGGCTGGGGCTGGCGTCAGGGCTGCC-----GGGGCAGGCTGTGCGTTAGA-GAGGTCTGGGAGGCCGTTGTTCGTTGTTCGTTACCGCAGCATTAACCTCCTGCAGCGATCTGCACGGGAAGC---GCGG-----AGGGACAGAAGGCTC------ACGTCTCGTGTGCTCTCA-CACCGGATGTGCCCCTGATCTG-----------CTGCACGATGAGCTGG---GAGATGCCTGGACAGCCTGTCCGGTGTGCTCTGCCTCCTCACCT---GGGTGGTCCTTG--GGGTGCCAACTGAACGACAGCGTCTTTCCCTCCTGGGGTAGAAGACTAGAGGGGCATCCTCGGCGGCGGTGACCCCTCCACCGAGATCGTGTGCGTGGGACTCTC---CTGCTTTTCTGCACATGACCCTGGCTGGGTGGGGAGATAG----------CCTTGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGAGCTCAGCAAGGCGCTGTG------------------CGGTTTCATACTGAGGAGACGTAGGCAGGGCT----------C---------AGGATGGAGGCCTGGGCCTCCCGGATGGAGGAGTTTAAAGGCAATGTCTCCAGGTAGTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCGGGTTGCTGATTTCAGGAAAATGTACCA-CTGCAGCTTCTGAGCGTGGAGGTTTGGTGCCGTTGTTCTC-A-GCTTGTAGGCAATTGTTTGTGAAGCT-CC-CGTTTGTCACCAGG-GCTT-GGAGAGGCAGTGAGGGCAGGGCTGAGGCCCTTTGGTGGGGGCAGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACA---GTGGGCAGGTGCAGAGG---------CTGGGAG-AGCCTGAAGGCAGGGCTTTCTTAGCGCTGTGTGATGAGGCCAGCCGTCCC-CGCATTAGCTGCGTGTGTGTCTCAGAAGCAGCCCTGGGGCTGAAAGGGTCCTGGCAGCCTGCGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCGCCTTTCAGGCTGG-CAGGTGGGTTTTCCAGAGCCCTGCAG-GGCTGTTCCTGACTGTCTCTGCCCGGTGCCGAGTTGTTTGCTGGGCATTCACCTGGTCATGGGA--AGA----GAACTTGCAGCTTTCTCCCCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33677152 1452 + 192294377 CAGGGCCCTCTTTAAGCAGAGGCACCTTCCACAACATCTGCACTGACTTGAACCCAGAGTTAAAAACATTGGCGTCGGTGGC---CTCTCCCCC---GTCATCCGG--CTCACGGGCCTGTTCCTTCTGTGCTGA----TGTTCATCCCCGCTGCTCCCTGCAGGCCACATGTGGGTGCTGAAGGTGCAGAATTCCTCTCCACCGGGGAGGCAGCCGCGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGCATCAACCGGTACGAGCTGTACTCCAGACACAACCCAGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GCGCACTTGAGGGCCATCTGTGTGCCGGCTGGGGCTGGCGTCAGGGCTGCC-----GGGGCAGGCTGTGCGTTAGA-GAGGTCTGGGAGGCCGTTGTTCGTTGTTCGTTACCGCAGCATTAACCTCCTGCAGCGATCTGCACGGGAAGC---GCGG-----AGGGACAGAAGGCTC------ACGTCTCGTGTGCTCTCA-CACCGGATGTGCCCCTGATCTG-----------CTGCACGATGAGCTGG---GAGATGCCTGGACAGCCTGTCCGCTGTGCTCTGCCTCCTCACCT---GGGTGGTCCTTG--GGGTGCCAACTGAACGACAGCGTCTTTCCCTCCTGGGGTAGAAGACTAGAGGGGCATCCTCGGCGGCGGTGACCCCTCCACCGAGATCGTGTGCGTGGGACTCTC---CTGCTTTTCTGCACACGACCCTGGCTGGGTGGGGAGATAG----------CCTTGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGAGCTCAGCAAGGCGCTGTG------------------CGGTTTCATACTGAGGAGATGTAGGCAGGGCT----------C---------AGGATGGAGGCCTGGGCCTCCCGGATGGAGGAGTTTGAAGGCAATGTCTCCAGGTAGTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCGGGTTGCTGATTTCAGGAAAATGTACCA-CTGCAGCTTCTGAGCGTGGAGGTTTGGTGCCGTTGTTCTC-A-GCTTGTAGGCAATTGTTTGTGAAGCT-CC-CGTTTGTCACCAGG-GCTT-GGAGAGGCAGTGAGGGCAGGGCTGAGGCCCTTTGGTGGGAGCGGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACA---GTGGGCAGGTGCAGAGG---------CTGGGAG-AGCCTGAAGGCAGGGCTTTCTTAGCGCTGTGTGATGAGGCCAGCCGT-CC-CGCATTAGCTGCGTGTGTGTCTCAGAAGCAGCCCTGGGGCTGAAAGGGTCCTGGCAGCCTGGGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCGCCTTTCAGGCTGG-CAGGTGGGTTTTCCAGAGCCCTGCAG-GGCTGTTCCTGACTGTCTCTGCCCGGTGCCGAGTTGTTTGCTGGGCATTCACCTGGTCATGGGA--AGA----GAACTTGCAGCTTTCTCCCCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4443450 1453 - 9440265 CAGGGCCCTCTTTAAGCAGAGGCACCTTCCACAACATCTGCACTGACTTGAACCCAGAGTTAAAAACACTGGCGTCGGTGGC---CTCTCCCCC---GTCATCCGG--CTCACGGGCCTGTTCCTTCTGTGCTAA----TGTTCATCCCCGCTGCTCCCTGCAGGCCGCATGTGGGTGCTGAAGGTGCAGAATTCCTCTCCACCGGGGAGGCAGCCGCGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGCATCAACCGGTACGAGCTGTACTCCAGACACAACCCAGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GCGCACTTGAGGGCCATCTGTGTGCCGGCTGGGGCTGGCGTCAGGGCTGCT-----GGGGCAGGCTGTGCGTTAGA-GAGGTCTGGGAGGCCGTTGTTCGTTGTTCGTTATGGCAGCATTAACCTCCTGCAGCGATCTGCACGGGAAGC---GCGG-----AGGGACAGAAGGCTC------ACGTCTCGTGTGCTCTCA-CACCGGATGTGCCCCTGATCTG-----------CTGCACGATGAGCTGG---GAGATGCCTGGACAGCCTGTCCGCTGTGCTCTGCCTCCTCACCT---GGGTGGTCCTTG--GGGTGCCAACTGAACGACAGCGTCTTTCCCTCCTGGGGTAGAAGACTAGAGGGGCATCCTCGGCGGCGGTGACCCCTCCACTGAGATCGTGTGCGTGGGACTCTC---CTGCTTTTCTGCACACGACCCTGGCTGGGTGGGGAGATAG----------CCTTGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGAGCTCAGCAAGGCGCTGTG------------------CGGTTTCATACTGAGGAGACGTAGGCAGGGCT----------C---------AGGATGGAGGCCTGGGCCTCCCGGATGGAGGAGTTTGAAGGCAATGTCTCCAGGTAGTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCGGGTTGCTGATTTCAGGAAAATGTACCA-CTGCAGCTTCTGAGCGTGGAGGTTTGGTGCCGTTGTTCTC-A-GCTTGTAGGCAATTGTTTGTGAAGCT-CC-CGTTTGTCATCAGG-GCTT-GGAGAGGCAGTGAGGGCAGGGCTGAGGCCCTTTGGTGGGAGCGGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACA---GTGGGCAGGTGCAGAGG---------CTGGGAG-AGCCTGAAGGCAGGGCTTTCTTAGCGCTGTGTGATGAGGCCAGCCGTCCC-CGCATTAGCTGCGTGTGTGTCTCAGAAACAGCCCTGGGGCTGAAAGGGTCCTGGCAGCCTGGGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCGCCTTTCAGGCTGG-CAGGTGGGTTTTCCAGAGCCCTGCAG-GGCTGTTCCTGACTGTCTCTGCCCGGTGCCGAGTTGTTTGCTGGGCATTCACCTGGTCATGAGA--AGA----GAACTTGCAGCTTTCTCCCCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17033816 1435 - 21915920 CAGGGCCCTCTTTAAGCAGAGGCACCTTCCACAACATCTGCACTGACTTGAACCCAGAGTTAAAAACATTGGCGTCGGTGGC---CTCTCCCCC---GTCATCCGG--CTCACGGGCCTATTCCTTCTGTGCTGA----TGTTCATCCCCGCTGCTCCCTGCAGGCCGCATGTGGGTGCTGAAGGTGCAGAATTCCTCTCCACCGGGGAGGCAGCCGTGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGCATCAACCGGTACGAGCTGTACTCCAGACACAACCCAGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GCGCACTTGAGGGCCATCTGTGTGCCGGCTGGGGCTGGCGTCAGGGCTGCT-----GGGGCAGGCTGTGCGTTAGA-GAGGTCTGGGAGGCCGTTGTTCGTTGTTCGTTACCGCAGCATTAACCTCCTGCAGCGATCTGCACGGGAAGC---ACGG-----AGGGACAGAAGGCTC------ACGTCTCGTGTGCTCTCA-CACCGGATGTGCCCCTGATCTG-----------CTGCACGATGAGCTGG---GAGATGCCTGGACAGCCTGTCCGCTGTGCTCTGCCTCCTCACCT---GGGTGGTCCTTG--GGGTGCCAACTGAACGACAGCGTCTTTCCCTCCTGGGGTAGAAGACTAGAGGGGCATCCTCGGCGGCGGTGACCCCTCCACCGATATCGTGTGCGTGGGACTCTC---CTGCTTTTCTGCACATGACCCTGGCTGGGTGGGGAGATAG----------CCTTGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGAGCTCAGCAAGGCGCTGTG------------------CGGTTTCATACTGAGGAGACAT-------------------------------------AGGCCTGGGCCTCCCGGATGGAGGAGTTTGAAGGCAATGTCTCCAGGTAGTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCGGGTTGCTGATTTCAGGAAAATGTACCA-CTGCAGCTTCTGAGCGTGGAGGGTTGGTGCCGTTGTTCTC-A-GCTTGTAGGCAATTGTTTGTGAAGCT-CC-CGTTTGTCACCAGG-GCTT-GGAGAGGCAGTGAGGGCAGGGCTGAGGCCCTTTGGTGGGAGCGGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACA---GTGGGCAGGTGCAGAGG---------CTGGGAG-AGCCTGAAGGCAGGGCTTTCTTTGCGCTGTGTGATGAGGCCAGCCGTCCC-CGCATTAGCTGCGTGTGTGTCTCAGAAGCAGCCCTGGGGCTGAAAGGGTCCTGGCAGCCTGGGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCGCCTTTCAGGCTGG-CAGGTGGGTTTTCCAGAGCCCTGCAG-GGCTGTTCCTGACTGTCTCTGCCCGGTGCCGAGTTGTTTGCTGGGCATTCACCTGGTCATGGGA--AGA----GAACTTGCAGCTTTCTCCCCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 162657 1448 - 21531802 CAGGACCCTCTTTAAGCAGAGGCGCCTTCCATAACATCTGCACTGACTTGAACCCAGAGTTAAAAACACTGGCGTCGGTGGC---CTCTCCCCC---GTCATCCGG--CTCACCGGCCTGTTCCTTCCGTGCTGA----TGTTCATCCCCGCTGCTCCCTGCAGGCCGCATGTGGGTGCTGAAGGTGCAGAATTCCTCTCCACCGGGGAGGCAGCCGTGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGCATCAACCGATACGAGCTGTACTCCAGACACAACCCAGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGCCCTTGG-GTGCACTTGAGGGCAGTCTGTGTGCCGGCCGGGGCTGGCATCAGGGCTGCC-----GGGGCAGGCTGTGCATTAGA-GAGGTCTGGGAGGC-------CGTTGTTCGTTACCGCAGCGTTAACCTCCTGCAGCGATCTGCACAGGCAGT---GCGG-----AGGGACGGAAAGCTC------GCGTCTCGTGTGCACTCA-CACTGGATGTGCCCC-GATCTG-----------CTGCACGATGAGCTGG---GAGATGCCTGGACAGCCCGTCCGCTGTGCTCTGCCTCCTCACCT---GGGTGGTCCTTG--GGGTGCCAACTGGACGACAGCGTCCCTCCCTCCTGGGGTAGAGGACTAGAAGGGCATCCTCGGCGGCGGTGACCCCTCCACCGAGACCGTGTGCGTGGGACTCTT---CTGCTTTTCTGCACACGACCCTGGCTGGGTGGGGAGATAG----------CCATGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCCTTCGTCAGAGCTCAGCAAGGCACTGTG------------------CGGTTTCATACTGAGGAGACGTAGGCAGGGTT----------C---------AGGATGGAGGCCTGGGCCTCCCGGGTGGAGGAGTTCAAAGGCAACGTCTCCAGGTGCTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCGGGTTGCTGATTTCAGGAAAATGTGCCA-CTGCAGCTTCTGAGTGTGGAGGCTTGGTGCCGTTGTTCTC-A-GCGTGTAGGCAATTGTTTGTGAAGCT-CC-CGTTTGTCACCAGT-GCTT-GGAGAGGCAGTGAGGGCAGGGCTGAGGCCCTTTGGTGGGAGCGGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGAGTGCACACA---GGGGGCAGGTGCAGAGG---------TTGGGAG-AGCCTGAAGGCAGGGCTTTCTTTGCGCTGTGTGACGAGGCCAGCCGTCCCACGCATTAGCTGCGTGTGTGTCTCAGAAGCAGCCCTGGGGCTGAAAGGGTCCCGGCGGCCTGGGGTTCTGCCCAGTTGCTGACACAGGA----CTCAGGTGTCCCCTTTCAGGCTGG-CAGGTGGGTTTTCCGGAGCCCTTCAG-GGCTGTTCCTGGCGGTCTCTGTCCGGTGCCGAGTTATTTGCTGGACACTCACCTGGCCATGGGAAGAGA----GAACTTGCAGCTTTCTCCCCAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 200657 1435 - 2515279 CAGGGCCCTCTTTAAGCAGAGGCACCTTCCACAACATCTGCACTGACTTGAACCCAGAGTTAAAAACATTGGCGTCGGTGGC---CTCTCCCCC---GTCAGCCGG--CTCACGGGCCTATTCCTTCTGTGCTGA----TGTTCATCCCCGCTGCTCCCTGCAGGCCGCATGTGGGTGCTGAAGGTGCAGAATTCCTCTCCACCGGGGAGGCAGCCGCGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGCATCAACCGGTACGAGCTGTACTCCAGACACAACCCAGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GCGCACTTGAGGGCCATCTGTGTGCCGGCTGGGGCTGGCGTCAGGGCTGCC-----GGGGCAGGCTGTGCGTTAGA-GAGGTCTGGGAGGCCGTTGTTCGTTGTTCGTTACCGCAGCATTAACCTCCTGCAGCGATCTGCACGGGAAGA---GCGG-----AGGGACAGAAGGCTC------ACGTCTCGTGTGCTCTCA-CACCGGATGTGCCCCTGATCTG-----------CTGCACGATGAGCTGG---GAGATGCCTGGACAGCCTGTCCGCTGTGCTCTGCCTCCTCACCT---GGGTGGTCCTTG--GGGTGCCAACTGAACGACAGCGTCTTTCCCTCCTGGGGTAGAAGACTAGAGGGGCATCCTCGGCGGCGGTGACCCCTCCACCGAGATCGTGTGCGTGGGACTCTC---CTGCTTTTCTGCACATGACCCTGGCTGGGTGGGGAGATAG----------CCTTGAGCCTGCTTCTTGTGGTTTTGAAGCTGTCCTTCGTCAGAGCTCAGCAAGGCGCTGTG------------------CGGTTTCATACTGAGGAGATGT-------------------------------------AGGCCTGGGCCTCCCGGATGGAGGAGTTTGAAGGCAATGTCTCCAGGTAGTTTGGGATCTGCTGAATTGGAC-A-AAAAAGGGCATCGGGTTGCTGATTTCAGGAAAATGTACCA-CTGCAGCTTCTGAGCGTGGAGGGTTGGTGCCGTTGTTCTC-A-GCTTGTAGGCAATTGTTTGTGAAGCT-CC-CGTTTGTCACCAGG-GCTT-GGAGAGGCAGTGAGGGCAGGGCTGAGGCCCTTTGGTGGGAGCGGCTGCTCCC-TGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACA---GTGGGCAGGTGCAGAGG---------CTGGGAG-AGCCTGAAGGCAGGGCTTTCTTTGCGCTGTGTGATGAGGCCAGCCGTCCC-CGCATTAGCTGCGTGTGTGTCTCAGAAGCAGCCCTGGGGCTGAAAGGGTCCTGGCAGCCTGGAATTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCACCTTTCAGGCTGG-CAGGTGGGTTTTCCAGAGCCCTGCAG-GGCTGTTCCTGACTGTCTCTGCCCGGTGCCGAGTTGTTTGCTGGGCATTCACTTGGTCATGGGA--AGA----GAACTTGCAGCTTTCTCCCCAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 355337 1450 + 6586416 CAGGGCCCTCTTTAAGCAGAGGCACCTTCAGTAACATCTGCACTGACTTGAACCCAGAGTTAAAAACCTTGGCGTCAGTGGC---CTCTCCCCC---GTCATCCGG--CTCACGGGCCCGTTCTTTCCATGCTGA----TGTTCATCCTCGCTGCTCCCTGCAGGCCGCGTGTGGGTGCTGAAGGTGCAGAATTCCTCTCCACCGGGGAGGCAGCCGTGGACTCCTATCCCAACTGGCTCAAGTTCCACATTGGCATCAACCGGTACGAGCTGTACTCCAGACAGAACCCAGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGCCCTTGG-GTGCACTTGAGGGCCATCTGGGTGCCGGCTGGGGCTGGCGTCAGGGCTGCC-----GGGGCAGGCTGTGCGTTAGA-GAGGTCTGGGAGGC-------CGTTGTTCATTCCTGCAGCTTTAACCTCCTGCAGCGATCTGCACGGGCAGC---GCAG-----AGGGACAGAAGGCTC------GCGTCTCGTGTGCACTCG-CACTGGATGTGCCCCTGATCTG-----------CTGCACGATGAGCTGG---GAGATGCCTGGACAGCCCGTCCACTGTGCTCTGCCTCCTTACCT---GGGTGGTCCTTG--GGGTGCCAACTGGACGACAGCGTCCTTCCCTCCTGGGGTAGAGGACTAGAGGGGCATCCTTGGCGGCAGTGACCCCTCCACCGAGACCGTGTGCATGGGACTCTC---CTGCTTCTCTGCACATGACCCTGGCTGTGGGGGGAGATAG----------CCATGAGCCTGCTTCTTGTGGTTTTGTAGTCGTCCTTCGTCAGAGCTCAGCAAGGCGCTGTG------------------TGGTTTCATACTGAGGAGACGTAGGCAGAGCT----------C---------AGGATGGAGGCCTGGGCCTCCCGGATGGAGGAGTTTGAAAGCAACGTCTCCAGGTCCTTTGGGATCTGTTGAATTGGACAA-AAAAAGGGCATCCAGTTGCTGATTTCAGGAAAATGTGCCA-CTGCAGCTTCTGAGTGTGGAGGTTTGGTGCCGTTGTTCTC-A-GCTCGTAGGCAATTGTTTGTGAAGCT-CC-CGTTTGTCACCAGT-GCTT-GGCGAGGCAGTGAGGGCAGGGCTGAGGCCCTTTGGTGGGAGCAGCTGCTCCC-CGGGGA--TTGCAGGGAGTGGGCCTGGGTGCACACA---GTGGGCAGGTGCAGAGG---------CTGGGAG-AGCCTGAAGGCAGGGCTTTCTTTGCGCTGCGTGATGAGGCCAGCCGTCCCATGCATTAACTGCGTGTGTGTCTCACAAGCAGCCCTGGGGCTGAGAGGGTCCTGGCAGCCTGGGGTTCTGTCCAGTTGCTGACACAGGA----CTTAGGTGTCCCCTTTCAGGCCAG-CAGGTAGGTTTTCCAGAGCCCTGCAG-GGCTGTTCTTGGCTGTCTCTGCCAGGTGCCGAGTTGTTTGCTGGGCACTCACCTGGTCATGGGAAGAGA----GAACTTGCAGCTTTCTCCCCAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 90259 1424 + 138751 CAGGGCCTTCTTTAAGCAGAGGTACCTTTGAT-AAATCTGCACTTACTTGAACCCAAAGTTAAAAACCTTGGCGTCGGGGGC---CACTCCCCT---GTCATCTGG--CTTACAGGCCTGTTCTTTCTGTGCTGACGTTCGTTCATCCTCACTGTGCCCTGCAGGCTGCACGCAGGTGCTGAAGGTGCAGAATTCCTGTCCACTGGGGAGGCGGCCATGGACTCCTATCCCAACTGGCTCAAATTCCACATTGGCATCAATCGGTACGAACTGTACTCCAGACACAACCCAGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCTTGG-GTGCACTCGAAGGCCGTCTGTTTGCTGGCTGGGGCTGGAGTCGGGG-TGCC-----GGTGCAGGCTTTGCATTAGA-GAGT-------------------TTGCTCATTACTGCAGCATC-ACATTCTGAGGTGATCTGCATGGGCAGC---CAGG-----AGGATCAGAGGCCTC------GAGTCTCCTGTGCTGTTA-CACTGGATGTGCTACTGATCTG-----------CTGCACAATGAGCAGG---GAGACTCCTTGACAGCCCATCCGCTGCACTCTGCCTCCTCACCT---GGGTGGTCCTGC--GGGTGCCAACTGGACAACAGTGTCCTTCCCTCCTG-GATAGAGGAATAGAGGGGA-TCCTTGGTGGCAGTGACCCCTCCACCAAAAGCCCGTGCACAGGGCTCCC---CTGCTTTTCTGCACATGACCCTGGCTAGGTGGAGAGACAG----------CCCAGAGCCTGCTTCTTGTGGTTTTGAAGCCGTCTTCCATCAGAGTTCAGCAAGACACTGTG------------------CAGTTTCATACTGAGGAGGAGTGTGCAGGCCT----------C---------AGGATGGAGTCCTGGGACTCCCAGATGGGGGAATTTGAAGGCAACATCTCCAGGTACCTTGGGATCTGCTGAATTGGAC-AGAAAAAGTCCGTCCAGTTGCTAATTTCAGGAAAATGTGCCA-CTGCAGTTTCTGAGCATGGAGGTTTGGTGCCA-TGTTCTC-A-GCTTGTAGGCAATTGTTTGTGAAGGT-CC-CATTTGTCACCAGT-GCTT--GAGAGGCAGTGAGGCTGGGGCTGAGGCCCTTTGCTAGGAGCAGCTGCT-CC-TGGCGG--CTGCAGGGAGTGGGCCTGGGTGCACACAGCTGTGGGCGGATGCGGAGG---------CCATGAG-ACCCTGAAGGCAGG----CCTTTGCACTGTGTGATGAGGCTGGCA-TCCCCGCCATTAGCTTCATGTGTGTCTCAGAAGTAATCCTGGTGCCGAAAGGGTTCCAGAATCCTGGAAGTTGGTCCAGTTGCTGCCATAGAA----CTAAGGTGTTTCCTATCAGGCCAGCCAGGCAGGTTCTCCAGAGATCTTCAGAGGCTCTTTCTGGCTGTCTCTGCTGGGTCCTGAGTTGTTTTCTGGGCACTCACCCACTCATGGGAATATG----GATCTTGCAGCT---------- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 402965 1387 - 2409723 cAGGGCTTTCTTTAAGCAGAGGCACCTTCGAT-AAATCTGCACTTACTTGAACCCAGAGTTAAAAACCTCGGCATCGGGGGC---CACTCCCCC---GTCATCCGG--CTCACAGGCCTCTTCTTTTTGTGCTGACGTTCGTTCATCCTCACTGTGCCCTGCAGGCCGCACACAGGTGCTGAAGGTGCAGAATTCCTGTCCACCGGGGAGGCGGCCGTGGACTCCTATCCCAACTGGCTCAAATTCCACATTGGCATCAACCGGTACGAACTGTACTCCAGACACAACCCAGCCATCGAGGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGTGTGGGTAGGTGTCCTTGA-GTGCACTCGAGGGCTGTGTGTTTGCTGGCCGGGGCTGGCGTCGGGG-TGCC-----GGGGCGGGCTCTGCATTAGA-GAGG-------------------TTGCTCATTACTGCAGCATT-ACTTTCTGCGGTGATCTGCACGGGCAGC---CAGG-----AGGGTCAGAGGCCTC------GAGTCTCCTGTGCTGTCA-CACTGGATGTGCTCCTGATCTG-----------TTGCACGATGAGCAGG---GAGACTCA-------------------------------------------------GG--GGGTGCCAAACGGATGACAGCATCCTTCCCTCCTG-GATAGAGGAACAGAGGGGCTTCCTTGGTGGCAGTGACTCCTCCACCAAGAGCCTGTACGCGGGGCTCCC---CTGCTTTTCTGCACACGACCCTGGCTGGGTGGAGAGACAG----------CCCAGAGCCTGTTTCTTGTGGTTTTGAAG-CGACTTCCATCAGAGCTCAGGAAGGCACTGTG------------------CAGTTTCATACTGAGGAGGAGTGTGCAGGCCT----------C---------AGGATGGAGGCCTGGGACTCCTGGGTGGGGGAATTTGAAGGCAACATCTCCAGGTACTTTGGGATCTGCTGAATTGGAC-AGAAAAAGTTCATCGAGTTGCTAATTTCAGGAGAATGTGTCA-CTGCAGTTTCTGAGCATGGAGGTTTGGTGCCA-TGTTCTC-A-GCTTGTAGGCAATTATTTGTGAAGGT-CC-CATTTGTCACCAGT-GCTT--GAGAGGCAGTGAGGGTGGGGCTGAGGCCCTTTGCTGGGAGCAGCTGCT-CC-TGGGGG--CTTCAGGGAGTGGGCCTGGGTGCGCCCGGCCGAGGGCGGATGCGGAGG---------CCGTGAG---CCTGAAGGCAGG----CCTTTGCACTGTGTCATGAGGCTGGCAGTCCCAGCTATTAGCTTCACGTGTGTCTCAGAAGTAATCCTGGTGCCAGAAGGGTCCCAGAATCCTGGAAGTCGGTCCAGTTGCTGCCATAGGA----CTTAGGTGTTTCCTATCAGGCCAGCCAGGTAGGTTCTCCAGAGCTCTTCAGAGGCTGTTTCTGGCTGACTCTGCTGGGCCCTGAGTTGTTTGCTGGACACTCACCCACTCATGGGAATACA----GAACTTGCAGCTTTCTCCCTAC i saiBol1.JH378296 I 310 C 0 s cebCap1.NW_016107703v1 564366 1436 - 2125214 CAGGGCCTTCTTTAAGCAGAGGCACCTTCGAT-AAATCTGCACTTACTTGAACCCAAAGTTAAAAACCTTGGTGTCGGGGGC---CACTCCCCT---GTCATCCGG--CTCACAGGCCTGTTCTTTCTGTGTTGACGTTCATTCATCCTCACTGCGCCCTGCAGGCCGCACGCAGGTGCTGAAGGTGCAGAATTCCTGTCCACTGGGGAGGCGGCCGTGGACTCCTATCCCAACTGGCTCAAATTCCACATTGGCATCAACCGGTACGAACTGTACTCCAGACACAACCCAGCCATAGAAGCCCTGCTGCACGACCTCAGCTCCCAGAGGATCACCAGTGTGGGTAGGTGTCCTTGG-GTGCACTCGAGGGCCGTCTGTTTGCTGGCTGGGGCTGGCGTCAGGG-TGCC-----GGGGCAGGTTCTGCAGTAGA-GAGG-------------------TTGCTCATTACTGCAGCATT-ACCTTCTGCGGTGATCTGCATGGGCAGC---CAGG-----AGGGTCAGAGGCCTC------AAGTCTCCTGTGCTGCCA-CACTGGATGTGCTCCTGATCTG-----------CTACACAATGAGCAGG---GAGACTCCTTGACAGCCCATCTGCTACGCTCTGCCTCCTCACCT---GGGTGGTCCCGG--GGGTGCCAACTGGATGACAGCGTCCTTCCCTCCTG-GATAGAGGAATAGAGGGGCATCCTTGGTGGCAGTGACCCCTCCACCAAGAGTCCGTGCGCGGGGCTCCC---CTGCTTTTCTGCACACGACCCTGCCTGGGTGGAGAGACAG----------TCCAGAGCCTGCTTCTTGTGGTTTTGAAGCCAACTTCCATCAGAGCTTAGTAAGGTACTGTA------------------CAGTTTCATACTGAGGAGGAGTGTGCAGGCCT----------C---------AGGATGAAGGCCTGGGACTCCCGGATGGGGGAATTTGAAGGCAACATCTCCAGGTACTTTGGGATCTGCTGAATTGGAC-AGAAAAAGTCCATCCAGTTGCTAATTTCAGGAAAATGTGCCA-CTGCAGTTTCTGATCATGGAGGTTTGGTGCCA-TGTTCTC-A-GCTTGTAGGCAATTGTTTGTGAAGGT-CC-CATTTGTCACCAGT-GTTT--GAGAGGCAGTGAGGGTGGGGCTGAGGCCCTTTGCTGGGAGCAGCTGCT-CC-TGGGGG--CTGCAGGGAGTGGGCCTGGGTGCGCATGGCCGTGGGCAGATGTGGAGG---------CTGTGAG-AGCCTGAAGGCAGG----CCTTTGCACTGTGTGATGAGGCTGGCAGTCCCAGCTCTTAGCTTCACGTGTGTCTCGGAAGTAATCCTGGTGCCGAAAGGGTCCCAGAATCCTGGAAGTCGGTCCAGTTGCTGCCATAGGA----ATTAGGTGTTTCCTGTCAGGCCAGCCAGGTAGGCTCTCCAGAGCTCTTCAGAGGCTGTTTCTGGCTGTCTCTGCTGGGTGCTGAGTTGTTTGCTGGGCACTCACCCACTCATGGGAATACG----GAACTTGCAGCTTTCTCCCCAC i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 157020 1409 + 376347 CAGGGCCTTCTTTAAGC-----------------AATCTGCGCTTACTTGAACCCAAAGTTAAAAACCTCGGCGTCGGGGGC---CGCTCCCTC---GTCAGCCGG--CTCGCAGGCCTGTTCTTTCTGTGCTGACATTCGTTCATCCTCACCGCGCCCTGCAGGCCGCACGCAGGTGCCGAAGGCGCACAGTTCCTGTCCACCGGGGAGGCGGCCGTGGACTCCTATCCCAACTGGCTCAAATTTCACATCGGCATCAACCGGTACGAACTGTACTCCAGACACAACCCGGCCATCGAGGGCCTGCTGCACGACCTCGGCTCCCAGAGGATCACCAGCGTGGGTAGGTGTCCCTGG-GCGCACTCGAAggctggctgtctgctggctggggctggcgtcgggg-tgcc-----ggggcaggctggGCGTT--A-GAGG-------------------TTGCTCGTGACTGCAGCATT-ACTTTCTGTGGTGATCTGCACGGGCAGC---CAGG-----AGGGTGAGCGGCCCC------GAGTCTCCTGTGCTGTCG-CACTGGATGTGCTGCTGATCTG-----------CTGCACGATGAGCAGG---GAGACTCCGTGGCGGCCCGTCCGCTGCGCTCTGCCTCCTCACCT---GGGTGGTCCTGG--GGGTGCCAACTGGGCGACGTCGTCCTTCCCTCCTG-GGCAGAGGAATAGAGGGGCGTCCTTGGCGGCAGTGACCCCTCCACCGAGAGCCTGTGCACGGGGCTCCC---CTGCTTCTCTGCACACGACCCTGGCTGGGTGGAGAGACAG----------CCCAGAGCCTGCTCCTTGTGGTTCTGAAGCCGTCTTCCATCAGAGCTCGGCAAGGCGCTGTG------------------CAGTTTCATATTGAGGAGGGGTGTGCAGGCCT----------C---------AGGATGGAGGCCTGGGACTCCCAGATGGGGGAATTTGAAAGCAACATCTCCAGGTACTTTGGCATCTGCTGAATCGGAC-AGAAAAAGTCCATCCAGTTGCTAATTTCAGGAAAATGTGCCA-GTGCAGTTTCTGAGCATGGAGGTTTGGTGCCA-TGTTCTC-A-GCTTGTAGGCAGTTGTTTGTAAAGGT-CC-CATTTGTCACCAGT-GCTT--GAGAGGCAGTGAGGGTGGGGCTGAGGCCCTTTGCCGGGAGCAGCTGCT-CC-TGGGGG--CTGCAGGGACTGGGCCTGAGTGCGCACGGCCGTGGGCGGATGCAGAGG---------CCGTGAG-AGCCTGAAGGCAGG----CCTTTGCACCGTGCGATGAGGCTGACGGTCCCGGCCATTAGCATCACGTGTGTCTCGGAAGTAATTCTGGTGCTGACAGGGTCCCAGAATCCTGGAAATCGGTCCAGTTGCTGCCATAGGA----CTC-GGTGTTTCCTATCAGGCCAGCCAGGTGGGTTCTCCAGAGCTCTTCAGAGGCTGTTT--------CTCTGCTGGGTCCTGAGTCGTTTGCTGGGCACTCACCCACTCATGGGAATATG----GAACTTGCAGCTTTCTCCCCAC i aotNan1.NW_018514293v1 C 0 I 681 s otoGar3.GL873611 2290792 1491 - 8137123 TGGGGCCCTTCTTGAGTAGAGGCATCTTCAAT-AAATCTGTACTTACTCTAACCTGAAGTTAAAGACCTTGGTGTCAATGATCAGCTCCCCTCA---TTCATCCTAATCTTGCTACACTGTCTGTTTT-TGTTGAC---TGTGGATCATCTTTCTTGTCTACAGGCCACGTGAAGGTGCTGAAGGTGAAGGGCTCTTGTCCACTGGGGAGGCGGCTGTGGACTCCTATCCTAACTGGCTCAAGTTCCACATTGGCATTAACCGTTATGAGTTATACTCCAGGCATAACCCAGCAATTGAGGCTCTGCTGCATGATCTTGGCTCCCAGAAGATCACTAGCGTGGGTAGGTGCCTGTGGTGAGCACTCAATGG--GTGTGTGTGCTGGCTCCAGACAGTGCCAGGGCTGTC-----TAGGCTGGCTTTTCTTTAGT-GAGCTCTGGGAAGC-------CACTGCTGGCTACTGGAGTATT-GCCACTAGT-GCAATTTGCACGGGCAGT---GTGGGTTGAGGAGTCTGTAGGCCTCTGTAGGCACTTCACATGCTCTCAGCAATGGGTGGGCTGCTGTTCCAATGGGTTGGGCTTGCAAGATGAGCAAGCAAGAGATGCCACAACTGCCTTGATATTGAGCTCTGCTTCCTCACTTGCAGAGTCGTCCTGGGTGGGCACTGACAAGACCACAAAGTCTCCCCTCAACCTGGTGAAGGAGTAGAGGGGTATGCCTGGTGGCTGCG-CCCCTCTCTCAAAAGGCTGTGCACAGGGTTTTCTTTCTCCTTTTCTGCACGTGA-CCTGGCTTGGTGGAGGGACAAGGATGAGAGCCAAGGAGGCTACTTCTTGTGGCTTTGAACCAGGTCTGCACCAGAGTTCAGCCAGGTGCTATG------------------TAAATTCCTATGGACAGGATATAAGCAGTGATCCACTCTGTGC---------AGGACAGAAGCCTGGATGTCCAAGAGGGAGCAGTTTAAAGGCAACATCT-CAAGTACTTTGCCATCTGCTGAATCGGAC-A-AAAAAAGGCATCTAATTGCTGATTTCAGGAAAATGTGTCAGCAGCAGTTTCGCAGTGTGGAGGTTTGGTGCCATTGTTCTTGA-GCTTGTAGGCGATTGTCTGTGAAGGTCCC-CATTAGTCACCAGTGGCTT-GGGGAGGCAGTGGTGGT-GGGCTGTGACCCTTCAGCAGGAAGAACTGCTCCCTCAGGCT--TTGTAGGGAGCTGTCCCGGGTGCACACAGC-TCGGATGAGGGGAGTGG---------CCAGTAGGAACCCAAGGGCAGC----TCTC---------------------CAGTGCAAGGCACTGTTATCATGTGTGTCTGGAGAGTGATTCTGGTGCTGAAAGGGTTCCAGTAACCTGG-GTTCTGTGCAGTTGCTTACACAGAGGAATGCTAGGTGCAACCTGTCGGGCTGG-CAAGTAAGTTTCCCAGAGTTCTTGAGAAGCTATTCATGGCTCCCCCTGCCCAATGCTGAGTGGTTTGCTGGGTGCTTACCTTGCTGTGGGAAGGCAGGAGGAACTTGCAGCTTTCTGCCTAT i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61079125 1266 - 77573801 CAGGGTCCTGTCTGAGCAGAGGCATCTTTGAATAAATCTGCATTTGTTTAGATCCAAAGTT-AAAACCTTGGCATTGGCACC---AACTCCCTCTTATTCATCCAGATTTTACCACCCTGTTCTTTCCCTGCTGATTCCGGGTCACCTTCATT---TTCTGTAGGCCACGTGAAGGCACTGAAAATGAAGAATTCTTGCCCACGGGGGAGGCGGCAGTGGACTCCTACCCCAACTGGCTTAAGTTCCACATCGGCATTAACCGGTACGAGCTCTACTCCAGACACAACCCTGCGATCGAAGCCCTGCTGCGCGACCTGAGTGCTCAGAAGATAACCAGTGTCGGTAGGTGCCCTCACTGTGCTTCTCAA------------------------TGGGGTAGGGTCTGCTGGGTGGGGGCTGGCTTTCCTGTGGAGGAGAACTGGGAAAC-------CATGGCTCCTTGCTGGAACATT-ACCTCCTGGAGTGATTTATGAGGGCAGCCTTCTAG-----AGGGACA---AGCTT------GCG--------------A-GGC------------------------------CTGTA-AAGGAGGGGA---GGGATACCTCTG-AGCAAGGCCAGTGA--------------------GGAAGG---CAG--AGGTGCT--------------GTCGTGTTCTGCAGGGGC-GAGGAAGGAGCAGGCACCCCTGCTGACTGGGGCGCCTCC-----------------------CTC-------------------------GGCACAGCAGGAAGACAG----------CG------------------------------------GGCAGAGCTCAGAGACCCGCTCTGCCCTGCTCCTGCCCCTGCCGTTTCCATGCACAGGGA--GTGACCAGGGCT----------CAGCTCTGCTAGGGTGGAGGCCCATGCGCTT-------AGTAATTCAGAGGCAATATCACCGAGTACTTTGGGATCTGCTGAATTGGAC-A-AAAAAAGGCATCCAATTACTGATTTCAGGGAAATGTGTCAGCAGCAGTTTCTGAGCACGGAGGTTTGGGGCCATTGTTCTC-AGGCCTGTAGGCGATCATTTGTGAAGAT-CCTCATTAGTCACCGTG-GCTTCCAAGAGGCAGTGAGGGATGGGCTGAGGCCCTGGGGTGGAGGGAACAG---TC-TGGGGGCTTTGCAGGAAGCTGGGCTGAGTTCACACC---GCGGGAAGGGGTGGAGGGAGGCCAGTCGGGGTT-AAGGCGAGTGTAGG----CCCCCACCCTGTGCTGTGGAGCAGACAGTCCGAGACACTGTCTTCTTGGCATTCCCCTAAGCAACGCTGATGC-----------------CCTGGGGCTCGGTCCAGCTGCTGACACAGGG-------GAGTGC---------AGCTGA-CAAGTGGGTTTTCCAGAGCTCTTTAAGGACTGTGTTTGGCTCGCTCTGCCCAGTACTGAGGTGTCTGCTGGGCATCTACTTGCT----------------G----TGTAGC-CTCTCTCTAG i canFam3.chr6 C 0 C 0 a score=72684.000000 s hg38.chr7_KI270899v1_alt 189170 9 + 190869 CCCTTGATC s panTro5.chr7_NW_015973580v1_random 64530 9 - 83720 CCCTTGATC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 578927 9 + 162613886 CCCTTGATC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 150582 9 - 432965 CCCGTGATC i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 212095 9 + 85365473 CCTGTGATC i nomLeu3.chr20 C 0 M 776 s rheMac8.chr3 34060666 9 + 185818997 TCCGTGATC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33678604 9 + 192294377 TCCATGATC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4444903 9 - 9440265 TCCGTGATC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17035251 9 - 21915920 TCCGTGATC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 164105 9 - 21531802 TCCGTGATC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 202092 9 - 2515279 TCCGTGATC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 356787 9 + 6586416 TCCGTGATC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 91683 7 + 138751 --CATGATC i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 404352 9 - 2409723 CACGTGATC i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 565802 9 - 2125214 CACATGATC i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2292283 9 - 8137123 CTGATGGTC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61080391 9 - 77573801 CCTGTGATT i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 158429 681 + 376347 I a score=103272.000000 s hg38.chr7_KI270899v1_alt 189179 15 + 190869 AGCTCACCTCATAAC----- s panTro5.chr7_NW_015973580v1_random 64539 15 - 83720 AGCTCACCTCAAAAC----- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 578936 15 + 162613886 AGCTCACCTCATAAC----- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 150591 15 - 432965 AGCTCACCTCATAAC----- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34060675 15 + 185818997 AGCTCACCTCATAAG----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33678613 15 + 192294377 AGCTCACCTCATAAG----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4444912 15 - 9440265 AGCTCACCTCATAAG----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17035260 15 - 21915920 AGCTCACCTCATAAG----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 164114 15 - 21531802 AGCTCACCTCATAAG----- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 202101 15 - 2515279 AGCTCACCTCATAAG----- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 356796 15 + 6586416 AGCTCACCTCATAAG----- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 91690 15 + 138751 AGCTCACCTCATAAA----- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 404361 15 - 2409723 AGCTCACCTCCTAAA----- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 565811 15 - 2125214 AGCTCACCTCATAAA----- i cebCap1.NW_016107703v1 C 0 C 0 s otoGar3.GL873611 2292292 14 - 8137123 AGGGTGCCCTAAAG------ i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61080400 19 - 77573801 -GCTCACCCTTGGGAAGGGG i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 158429 681 + 376347 I e nomLeu3.chr20 212104 776 + 85365473 M a score=519391.000000 s hg38.chr7_KI270899v1_alt 189194 71 + 190869 AGAGATCAGCTGGACAAGCTGGG-----AGTCCTCTTCCCTCCATGCTGCCTGGGAGTAACCTGAACCCCTGCCC--C s panTro5.chr7_NW_015973580v1_random 64554 71 - 83720 AGAGATCAGCTGGACAAGCTGGG-----GGTCCTCTTCCCTCCATGCTGCCTGGGAGTAACCTGAACCCCTGCCC--C i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 578951 71 + 162613886 AGAGATCAGCTGGACAAGCTGGG-----GGTCCTCTTCCCTCCATGCTGCCTGGGAGTAACCTGAACCCCTGCCC--C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 150606 70 - 432965 AGAGATCAGCTGGAC-AGCTGGG-----GGTCCTCTTCCCTCCATGCTGCCTGGGAGTAACCTGAACCCCTGCCC--C i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34060690 70 + 185818997 AGAGATCAGCTGGACAAGCTGGG-----GGTCCTCTTCCCTCCA---TGCCTGGGAGGAACCTGAACACCTCCCCCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33678628 70 + 192294377 AGAGATCAGCTGGACAAGCTGGG-----GGTCCTCTTCCCTCCA---TGCCTGGGAGGAACCTGAACACCTCCCCCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4444927 70 - 9440265 AGAGATCAGCTGGACAAGCTGGG-----GGTCCTCTTCCCTCCA---TGCCTGGGAGGAACCTGAACACCTCCCCCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17035275 70 - 21915920 AGAGATCAGCTGGACAAGCTGGG-----GGTCCTCTTCCCTCCA---TGCCTGGGAGGAACCTGAACACCTCCCCCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 164129 72 - 21531802 AGAGATCAGCTGGACAAGCTGGG-----GGTCCTCTTCCCTCCATACTGTCTGGGAGGAACCTGAAC-CCTCCCCATC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 202116 70 - 2515279 AGAGATCAGCTGGACAAGCTGGG-----GGTCCTCTTCCCTCCA---TGCCTGGGAGGAATCTGAACACCTCCCCCTC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 356811 73 + 6586416 AAAGATCAGCTGGACAAGCTGGG-----GGTCCTCTTCCCTCCGTGCTGCCTGGGAGGAACCTGAACACCTCCCCCTC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 91705 65 + 138751 AGAGATCAGCTGGACACACTGGG-----CATCCTCTTCCCTCCATACTGCCTGGAGG------GAACACCTTCCCC-- i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 404376 71 - 2409723 AGAGATCAGCTGGACACACTGGG-----CGTCCTCTTCCCTCCATACTGCCTGGGAGGAACCCGAACACCTTCCCC-- i saiBol1.JH378296 C 0 I 1 s cebCap1.NW_016107703v1 565826 71 - 2125214 AGAGATCAGCTGGACACACTGGG-----TGTCCTCTTCCCTCCATACTGCCTGGGAGGAATCCGAACACCTTCCCC-- i cebCap1.NW_016107703v1 C 0 I 1 s aotNan1.NW_018514293v1 159110 71 + 376347 aGAGATCAGCTGGACACACTGGG-----CGTCCTCTTCCCTCCATACTGCCTGGGAGGAACCCGAACACCTTCCCC-- i aotNan1.NW_018514293v1 I 681 I 9 s otoGar3.GL873611 2292306 59 - 8137123 GAAGAGCA-CTGGTCAGGATGAGGTGCTGGTCTTCCTCCCTACT---TACTT-------------ACACCTTCCCA-- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61080419 61 - 77573801 AGCGAACAG--GAAGAAGCTGGT-----G------TTTCCTCTTAACTGGCT-GCACCTCCCAGACCCCCATCCT--- i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 212104 776 + 85365473 M a score=264142.000000 s hg38.chr7_KI270899v1_alt 189265 41 + 190869 -CCTCCAGGCCCCCCTCCGTGAAAGCGCTGCCTTTCTCCTGC- s panTro5.chr7_NW_015973580v1_random 64625 41 - 83720 -CCTCCAGGCCCCCCTCCATGAAAGCGCTGCCTTTCTCCTGC- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 579022 41 + 162613886 -CCTCCAGGCCCCCCTCCGTGAAAGCGCTGCCTTTCTCCTGC- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 150676 41 - 432965 -CCTCCAGGCCCCCCTCCGTGAAAGCTCTGCCTTTCTCCTGC- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34060760 40 + 185818997 -CCTCGAGGCCCCCCTCCTTGAAAACTCTGCCTTTCTCCTG-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33678698 40 + 192294377 -CCTCGAGGCCCCCCTCCTTGAAAACTCTGCCTTTCTCCTG-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4444997 40 - 9440265 -CCTCGAGGCCCCCCTCCTTGAAAACTCTGCCTTTCTCCTG-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17035345 40 - 21915920 -CCTCGAGGCCCCCCTCCTTGAAAACTCTGCCTTTCTCCTG-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 164201 40 - 21531802 -CCTCGAGGCCCCCCTCCATGGAAACTCTCCCTTTCTCCTG-- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 202186 40 - 2515279 -CCTCGAGGCCCCCCTCCTTGAAAACTCTGCCTTTCTCCTG-- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 356884 41 + 6586416 -CCTCGAGGCCCCCCTCCATGAAAGCTCTGCCTTTCTCCTGC- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 91771 40 + 138751 -CCCTCGAGCCCCGCTCTGTGAAAGCTCTGCCTTTCTCCTA-- i calJac3.chrUn_GL286444 I 1 I 1 s saiBol1.JH378296 404448 40 - 2409723 -GCCTTGACCCCCTCTCCGTGAAAGCTCTGCCTTTCTCCTG-- i saiBol1.JH378296 I 1 I 1 s cebCap1.NW_016107703v1 565898 40 - 2125214 -CCCTCAAGCCCCCCTCCGTCAAAGCTCTGCCTTTCTCCTG-- i cebCap1.NW_016107703v1 I 1 I 1 s otoGar3.GL873611 2292365 24 - 8137123 -AACCCAGGCCTCCCT----------GCTGTCCTT-------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61080480 40 - 77573801 GCCTC--GGCCTTCCCCGTGAGAAGCTCAGCCTCCCTCCTG-C i canFam3.chr6 C 0 C 0 e aotNan1.NW_018514293v1 159181 9 + 376347 I e nomLeu3.chr20 212104 776 + 85365473 M a score=3587437.000000 s hg38.chr7_KI270899v1_alt 189306 448 + 190869 CCCTGCAGCGGTCTGAGGGCTTTCAGCTGTGCTGGGGAACAGTCCTG--------CAGACAGCCACAGCCAGAACGTCCCTTCTGCCCCTGAGAGTGAGCATGGCCATTAAGGAAATATCCGATGCATTGATCAACATGtttgtccattcagcagattttactg-gcacctcctgcatgtcagaccccctttctgggtggtggggagttgaggatgagttcagcctcaacgagatctgctgcctctgtggacctgacagccccagg-------aaga---gacacacacgcaCAGTGCCCGATCCTGAGGAGGAACGAGCACTTC-AGAGCCGTGCACGCCAGCCAGGCCGTGTGGAGAGGAGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACAGGGTCTGTCGGGCAGCTTACCTTCCAGGTGG-GTCCGT---CTTGGCAGGGAGAGGAATGAGAG-AGCCGTGCAC s panTro5.chr7_NW_015973580v1_random 64666 448 - 83720 CCCTGCAGGGGTCTGAGGGCTTTCAGCTGTGCTGGGGAACAGTCCTG--------CAGACAGCCACAGCCAGAACGTCCCTTCTGCCCCTGAGAGTGAGCATGGCCATTAAGGAAATATCTGATGCATTGATCAACATGtttgtccattcagcagattttactg-gcacctcctgcatgtcagaccccctttctgggtggtggggagttgaggatgagttcagcctcaacgagatctgctgcctctgtggacctgacagccccagg-------aaga---gacacacaggcaCAGTGCCCGATCCTGAGGAGGAACGAGCACTTC-AGAGCCGTGCACACCAGCCAGGCCATGTGGAGAGGAGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACGGGGTCCGTCGGGCAGCTTACCTTCCAGGTGG-GTCCGT---CTTGGCAGGCAGAGGAATGAGAG-AGCCGTGCAC i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 579063 448 + 162613886 CCCTGCAGGGGTCTGAGGGCTTTCAGCTGTGCTGGGGAACAGTCCTG--------CAGACAGCCACAGCCAGAACGTCCCTTCTGCCCCTGAGAGTGAGCATGGCCATTAAGGAAATATCCGATGCATTGATCAACATGtttgtccattcagcagattttactg-gcacctcctgcatgtcagaccccctttctgggtggtggggagttgaggatgagttcagcctcaacgagatctgctgcctctgtggacctgacagccccagg-------aaga---gacacacaggcaCAGTGCCCGATCCTGAGGAGGAACGAGCACTTC-AGAGCCGTGCACGCCAGCCAGGCCATGTGGAGAGGAGGGGCCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACGGGGTCCGTCGGGCAGCTTACCTTCCAGGTGG-GTCCGT---CTTGGCAGGGAGAGGAATGAGAG-AGCCGTGCAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 150717 448 - 432965 CCCTGCAGGGGTCTGAGGGCTTTCAGCTGTGCTGGGGAACAGTCCTG--------CAGACAGCCACAGCCAGAACGTCCCTTCTGCCCCTGAGAGTGAGCGTGGCCATTAAGGAAATATCCGATGCATTGATCAACATGtttgtccattcagcagattttactg-gcacctcctgcatgtcagaccccctttctgggtggtggggagttgaggatgagttcagcctcaacgagatctgctgcctctgtggacctgacagccccagg-------aaga---gacacacatgcaCAGTGCCCGATCCTGAGGAGGAACGAGCACTTC-AGAGCCGTGCACACCAGCCAGGCCGTGTGGAGAGGAGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACGGGGTCCGTCGGGCAGCTTACCTTCCAGGTGG-GTCCGT---CTTGGCAGGGAGAGGAATGAGAG-AGCCGTTCAC i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34060800 447 + 185818997 CCCTGCAGGGGTCTGAGGGCTTCGAGCTGCGCTGGGGAGCAGTCCTG--------CAGACAGCCACAGCCGGAACGTCCCTTCTGCCCCCGAAAGTGAGCGTGGCCATTAAGGAACTATCCGATGCATTGATCAATGTGTGGGtccatccagcagattttaccg-gcacctcctgcatgtcaggccccgtttctgggtggtggggagttgaggatgagttcagcctcaaggagatccgctgcctctgtggaccggacggcctccgg-------aaga---gacgcacacg--caGTGCCCGGTCCTGAGAAGGAACGAGCACTTC-AGAGCCACGCACGCCAGGCAGGGCGTGTGGAGAGGAGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACGGGGTCCGTCAGGCGGCTCACCTTCCAGGTGGGGTCCGT---CGTGGCAGGAAGAGGAATGTGAG-AGCATTGCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33678738 447 + 192294377 CCCTGCAGGGGTCTGAGGGCTTCGAGCTGCGCTGGGGAGCAGTCCTG--------CAGACAGCCACAGCCGGAACGTCCCTTCTGCCCCCGAAAGTGAGCGTGGCCATTAAGGAACTATCCGATGCATTGATCAATGTGTGGGtccatccagcagattttaccg-gcacctcctgcatgtcaggccccgtttctgggtggtggggagttgaggatgagttcagcctcaaggagatccgctgcctctgtggaccggacggcctccgg-------aaga---gacgcacacg--caGTGCCCGGTCCTGAGAAGGAACGAGCACTTC-AGAGCCACACACGCCAGGCAGGGCGTGTGGAGAGGAGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACGGGGTCCGTCAGGCGGCTCACCTTCCAGGTGGGGTCCGT---CGTGGCAGGAAGAGGAATGTGAG-AGCATTGCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4445037 447 - 9440265 CCCTGCAGGGGTCTGAGGGCTTCGAGCTGTGCTGGGGAGCAGTCCTG--------CAGACAGCCACAGCCGGAACGTCCCTTCTGCCCCCGAAAGTGAGCGTGGCCATTAAGGAACTATCCGATGCATTGATCAATGTGTGGGtccatccagcagattttaccg-gcacctcttgcatgtcaggccccgtttctgggtggtggggaGTTGAGGATGAGTTCAGCCTCAAGGAGATCCGCTGCCTCTGTGGACTGGACGGCCTCCGG-------AAGA---GACGCACACG--CAGTGCCCGGTCCTGAGAAGGAACGAGCACTTC-AGAGCCACGCACGCCAGGCAGGGCGTGTGGAGAGGAGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACGGGGTCCGTCAGGCAGCTCACCTTCCAGGTGGGGTCCGT---CGTGGCAGGAAGAGGAATGTGAG-AGCATTGCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17035385 447 - 21915920 CCCTGCAGGGGTCTGAGGGCTTCGAGCTGCGCTGGGGAGCAGTCCTG--------CAGACAGCCACAGCCGGAACGTCCCTTCTGCCCCCGAAAGTGAGCGTGGCCATTAAGGAACTATCCGATGCATTGATCAATGTGTGGGtccatccagcagattttaccg-gcacctcctgcatgtcaggccccgtttctgggtggtggggagttgaggatgagttcagcctcaaggagatccgctgcctgtgtggaccggacggcccccgg-------aaga---gacgcacatg--caGTGCCCGGTCCTGAGAAGGAACAAGCACTTC-AGAGCCACGCACGCCAGGCAGGGCGTGTGGAGAGGAGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACGGGGTCCGTCGGGCGGCTCACCTTCCAGGTGGGGTCCGT---CGTGGCAGGGAGAGGAATGCGAG-AGCATTGCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 164241 447 - 21531802 CCCTGCAGGGGTCTGAGGGCTTCGAGCTGTGCTGGAGGGCAGTCCTG--------CAGACAGCCACAGCCGGAACGTCCCTTCTGCCCCCGAAAGTGAGCGTGGCCGTTAAGGAAATATCCGATGCATTGATCAGTGTGTGGGtccattcagcagattttacca-gcacctcctgcatgtcaggccccgtgtctgggtggtggggagttgaggatgagttcagcctcaaggagatccgctgcctctgtggacccaacggcccccgg-------aaga---gacgcacatg--caGTGCCCGGTCCTGAGGAGAAATGAGCACTTC-AGAGCCACACATGCCAGGCAGGGCGTGTGGAGAGGAGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACGGGGTCCGTCGGGCGGCTCGCCTTCCAGGTGGGGTCCGT---CGTGGCAGGGAGAGGAATGTGAG-AGCATTGCAC i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 202226 447 - 2515279 CCCTGCAGGGGTCTGAGGGCTTCGAGCTGCGCTGGGGAGCAGTCCTG--------CAGACAGCCACAGCCGGAACGTCCCTTCTGCCCCCGAAAGTGAGCGTGGCCATTAAGGAACTATCCGATGCATTGATCAATGTGTGGGtccatccagcagattttaccg-gcacctcctgcatgtcaggccccgtttctgggtggtggggagttgaggatgagttcagcctcaaggagatccgctgcctctgtggaccggacggcccccgg-------aaga---gacgcacacg--caGTGCCCGGTCCTGAGAAGGAACGAGCACTTC-AGAGCCACGCACGCCAGGCAGGGCGTGTGGAGAGGCGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCACAGGGTCCGTGGGGCGGCTCACCTTCCAGGTGGAGTCCGT---CGTGGCAGGAAGAGGAATGCGAG-AGCATTGCAC i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 356925 445 + 6586416 CCCTGCAGGGGTCTGAGGGCTTCGAGCTGTGCTGGGGAGCAGTCCTG--------CAGACAGCCACAGCCAGAACGTCCCTTCTGCCCCCGAAAGTGAGCCTGGCCATTAAGGAAATA-CCGATGCATTGATCAATGTGTCGGtccagtcagcagattttaccg-gcacctcctgcacgtcagaccccgtttctgggtggtggggagttgaggatgagttcagcctcaaggagatccgctgcctctgtggacccgacagtctccgg-------aaga---ggcacacacg--caGTGCCCGGTCCTGAGGAGGAATGAGCACTTC-AGAGCCACGCACACCAGGCAGGGTGTGTGGAGAGGAGGGGGCTCCA-C----------------TGGGAG---GGG----CTGAG--GACCTTCCAC-GGGTCCGTTGGGCGGCTCACCTTCCAGGTGGGGTCCGT---CGTGGCAGGGAGAGAAATGCAAG-AGCATTGCAC i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 91812 441 + 138751 CCCTGCAGGGGGCTGGGGGCTTCGAACTGTGCTGGGGAGCAGTCCTG--------CAGACAGCCATAGCCAGAATGTCGCTTCTGCCCCTTAAAGTAAGCATGGCCATTAAGGAAATATCC--------GACCAACTTGttggtgcattccacagattttactgggtacctcctgcatttcagaccccctctctgagtggtagggga-tgaagatgagctcagcctcaaggagatctgctacctctgtggacctgacagccccaca-------aggacagggcacacaca--cagtgcccaatcctgaggaggaatgagcacttg-agggccacacaca-cagccagggcatgtggaaaggagagggctcca-c----------------tgga-----ggg----ctgaggagaccttCCATAGGGCCCTTTGGGCAGCTCGCCTTCCAGGTGGGGTCCGT---CTCGGCAGGGAGAGAAATGCGAA-AGCATTGTAC i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 404489 435 - 2409723 CCCTGCAGAGGTCTGGGGGCTTCGAACTGTGCTGAGGAGCAGTCCTG--------CAGACAGCCACAGCCAGAATGTCCCTTCTGCCCCTTAGAGTAAGCATGGCTGTTAAGGAAACATTC--------GAGCAACTTGtttgtgcattctgcagattttactgagaacctcctgcatttcaggccccctttctgagtggtaggg-------GATGAGCTCAGCCTCAATGAGATCTG--------------CTGACAGCCCCACG-------AGGACAGGACACACACG--CAGTGCCCGATCCTGAGGAGGAATGAGCACTTG-GGGGCCATGCACA-CAGCCAGGGCATGTGGAAAGGAGAGGGCCATG-CACACAGCCAGGGCATGTGGAAAGGCAGG----CTGAGAAGACCTTC-------CCCTTTGGGCAGCTCGCCTTCCAAGTGGGGTTCGT---CTCAGCAGGGAGAGAAATGCAAA-AGCATTGCAC i saiBol1.JH378296 I 1 C 0 s cebCap1.NW_016107703v1 565939 441 - 2125214 CCCTGCAGGGGTCTGGGGTCTTCGAACTGTGCTGGGGAGCAGTCCTG--------CAGACAGCCACAGCCAGAATGTCCCTTCTGCCCCTTAGAGTAAGCATGGCCATTAAGGAAATATCC--------GACCAACTTGttggtgcattccgcagattttactgggtacctcctgcatttcaggccccctttctgagtggtaggcga-tgaggatgagctcagcctcaaggagatctgctgcctctgtggacctgacagccccacg-------aggacaggacacacatg--caGTGCCCAATCCTGAGGAGGAATGAGCACTTG-AGGGCCACGCACA-CAGCCAGGGCATGTGGAAAGGAGAGAGCTCCA-C----------------TGGA-----GGG----CTGAGGAGATCTTCCACAGGGCCCTTTGGGCAGCTCGCCTTCCAAGTGGGGTCTGT---CTCGGCAGGGAGAGAAATGCGAA-AGCATTGCAC i cebCap1.NW_016107703v1 I 1 I 50 s aotNan1.NW_018514293v1 159190 441 + 376347 CCCTGCAGGGGTCTGGGGGCTTTAAACTGTGCTGGGGAGCAGTCCCA--------CAGACAGCCACAGCCACAATGTCCCTTCTGCCCCTTAGATTAAGCATGGCCATTAGGGAAATATCC--------GACCAACTTGttggtgcgttccgcagatcttactgggtacctcctgcatttcaggccccctttctgagtggtggggta-tgaggatgagctcagcctcaacgagctctgctgcctctgtggacctgacagccccacg-------agggcaggacacacgtg--caGTGCCCGATCCTGAGGAGGAATGAGCACTTG-AGGGCCACGCACA-CAGCCAGGGCATGTGGAAAGGAGAGGGCTCCG-C----------------TGGA-----GGG----CCGGGGAGACCTTCCACAGGGCCCTCTGGGCAGCTCGCCTTCCAAGTGGGGTCCAT---CTTGGCAGGGAGAGAAATGTGAA-AGCATTGCAC i aotNan1.NW_018514293v1 I 9 C 0 s otoGar3.GL873611 2292389 342 - 8137123 ---TGTAGGGTCCAGAGGGCTTTGGACTGTGCTGGG--ACTATGCTGGGACATCTCACACAGCTGCAGCCAGGGTGCTTCTTCT----CTGAGAGTTAGCATGGACCTTAGGGGACTATCTGCTGCGTTGACCTGCTTGCCTGTCCCTCCGGCAGGTTTTATAGGGTATTTTCTGCATTTCAGACTCC--TTCTGGGT-GTGAGGAGTTGAGG---------------------------------GTGGACCTGACAGTCACAGG-------AAGA---CAC-----TG--AGGTGTCAGGTGCTTTGGAGAGGAGAGAGCCTC-TA----------------CAGG--ATATGGGGATGGGGAAGCTCCC-C----------------AGGGAA---AGA----CT-------------------------------------------------TCCGG---CATAGGAGGGAAGGGAATGGCAGCAGCACTGCAC i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61080520 394 - 77573801 -CATGCGTACAACACAG---------------------ACCATCCCG--------TGGACAGCCACGGCCAGGGTGCCCCTTTCACTCTTGATAATAGACGAGGCC--------AGTATCCAGGGCGTTGACTCACTGGttcatccactcagaagattttcttgaccatctcctggatgtcaggccac-tttctgggtagcggg---TTGAGGATGAACG-AACCTCAGCAGGAT----TGATGCTGCTGACCCAAGACGTCCGGGGGCAAGCAGGA---CACGAACACA--CAATG----------AGGAGGCATGAATGCTTTGAGCACCATTCACATAAA-------ATCTAG------GTGACCTCCATC----------------TAGAAG---GAGGGCATGGAG--CATGTTCCATAAGAAAAGATGTCTGACCCAGGGCTTAAATGAAGTACAGGCACTTGTCATAGACAGGGATCTGGA-GG-------- i canFam3.chr6 C 0 C 0 e nomLeu3.chr20 212104 776 + 85365473 M a score=7847.000000 s hg38.chr7_KI270899v1_alt 189754 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 65114 1 - 83720 A i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 579511 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 151165 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34061247 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33679185 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4445484 1 - 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17035832 1 - 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 164688 1 - 21531802 A i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 202673 1 - 2515279 A i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 357370 1 + 6586416 G i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 92253 1 + 138751 A i calJac3.chrUn_GL286444 C 0 I 1 s saiBol1.JH378296 404924 1 - 2409723 A i saiBol1.JH378296 C 0 I 1 s aotNan1.NW_018514293v1 159631 1 + 376347 A i aotNan1.NW_018514293v1 C 0 I 49 s otoGar3.GL873611 2292731 1 - 8137123 A i otoGar3.GL873611 C 0 I 1 e canFam3.chr6 61080914 0 - 77573801 C e cebCap1.NW_016107703v1 566380 50 - 2125214 I e nomLeu3.chr20 212104 776 + 85365473 M a score=232752.000000 s hg38.chr7_KI270899v1_alt 189755 49 + 190869 CCAGCCAGGGCGTTCGGGAGGAGCAGCAC----GCAAGTTAGAAAGTCCCCAG- s panTro5.chr7_NW_015973580v1_random 65115 49 - 83720 CCAGCCAGGGCGTTCGGGAGGAGCAGCAC----GCAAGTTAGAAAGTCTCCAG- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 579512 49 + 162613886 CCAGCCAGGGCGTCCGGGAGGAGCAGCAC----GCAAGTTAGAAAGTCTCCAG- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 151166 49 - 432965 CCAGCCAGGGCGTTCGGGAGGAGCAGCAC----GCAAGTTAGAAAGTCTCCAG- i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34061248 49 + 185818997 CCAGCCAGGGCGTTCGGGAGGCGCAGCAC----TCACATTTGGAAGCCTCCCA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33679186 49 + 192294377 CCAGCCAGGGCGTTCGGGAGGCGCAGCAC----TCACATTTGGAAGCCTCCCA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4445485 49 - 9440265 CCAGCCAGGGCGTTCGGGAGGCGCAGCAC----TCACATTTGGAAGCCTCCCA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17035833 49 - 21915920 CCAGCCAGGGCGTTCGGGAGGCGCAGCAC----TCACGTTTGGAAGCCTCCCA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 164689 49 - 21531802 CCAGCCAGGGCGTTCGGGAGGCGCAGCAC----CCACGTTCGGGAGCCTCCCA- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 202674 44 - 2515279 CCAGCCAGGGCGTTCGGGAGGCGCAGCAC----TCACGTT-----GCCTTCCA- i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 357371 49 + 6586416 CCAGCCAGGGCGTTCGGGAGGCGCAGCAC----TCACGTTCGGGAACCTCCCA- i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 92255 48 + 138751 GCAGCCAGGGCTTTCGGGAGGTGTAGCAC----TTGCCTTTGGA-GCTTCCCA- i calJac3.chrUn_GL286444 I 1 C 0 s saiBol1.JH378296 404926 48 - 2409723 GTAGCCAGGGCTTTCGGAAGGTGTAGCAC----TCGCCTTTGGA-GCCTCGCA- i saiBol1.JH378296 I 1 C 0 s otoGar3.GL873611 2292733 30 - 8137123 GTGGAAAGGATATTGGGGAAGTGCAA----------------GGAG-------- i otoGar3.GL873611 I 1 C 0 s canFam3.chr6 61080914 51 - 77573801 ---GCTGGGGCTTCTGGGAAAATGAGAACATATTAAAATTAGAAATGTTTTTAG i canFam3.chr6 C 0 I 28 e aotNan1.NW_018514293v1 159632 49 + 376347 I e cebCap1.NW_016107703v1 566380 50 - 2125214 I e nomLeu3.chr20 212104 776 + 85365473 M a score=2498575.000000 s hg38.chr7_KI270899v1_alt 189804 291 + 190869 TGCCGCTGTCC-GTATGagcttctctccagctcattttccccatctgtccagtgggatc-tcgctgcgtgggaccaatgca-aggataggatgagat-gtgcatgtgagcaagcttgttaaatattaactagtactTTGTGCG-TGGCCTTCCACAACAGTCCCCTCGTGTG-----------CACAGGCAGGGTCT-GAGCAG----AGGGAGGGCTTTGTGGATTCCAAAGGCCACCAGGCCCTTGGCAGGCAACTGCAGCTCGCCA--CCTCCCTCACCGACCGGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAACACTGAAG s panTro5.chr7_NW_015973580v1_random 65164 291 - 83720 TGCCGCTGTCC-GTATGagcttctctccagctcattttccccatctgtccagcggggtg-tcgctgcgtgggaccaatgca-aggataggatgagat-gtgcatgtgagcaagcttgtaaaatattaactagcacTTTGTGCG-TGGCCTTCCACAACAGTCCCCTCGTGTG-----------CACAGGCAGGGTCT-GAGCAG----AGGGAGGGCTTTGTGGATTCCAAAGGCCACCAGGCCCTTGGCAGGCAACTGCAGCTTGCCA--CCTCCCTCACAGACTGGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAACACTGAGG i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 579561 291 + 162613886 TGCCGCTGTCC-GTATGagcttctctccagctcattttccccatctgtccagcggggtg-tcgctgcgtgggaccaatgca-aggataggatgagat-gtgcatgtgagcaagcttgtaaaatattaactagcacTTTGTGCG-TGGCCTTCCACAACAGTCCCCTCGTGTG-----------CACAGGCAGGGTCT-GAGCAG----AGGGAGGGCTTTGTGGATTCCAAAGGCCACCAGGCCCTTGGCAGGCAACTGCAGCTCGCCA--CCTCCCTCACAGACTGGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAACACTGGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 151215 290 - 432965 TGCCGCTGTCC-GTATGagcttctctccagctcattttccccatctgtccagcggggtc-tcgctgcgtgggaccaatgca-aggataggatgagat-gtgcatgtgagcaagcttgcaaaatattaactagtaCTTTGTGCG-TGGCCTTCCACAACAGT-CCCTCGTGTG-----------CACAGGCAGGGTCT-GAGCAG----AGGGAGGGCTTTGTGGATTCCAAAGGCCACCAGGCCCTTGGCAGGCAACTGCAGCTCGCCA--CCTCCCTCACAGACCGGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAACACTGAGG i gorGor5.CYUI01015914v1 C 0 C 0 s rheMac8.chr3 34061297 291 + 185818997 TGCCGCTGTCC-GTGTGagcctctctccagctcattttccccgtctgtccagcggggtc-tccccacgtaggatcgatgca-aggataggatgagatggtgcatgtgagcaagcttgtaaaacattaactagtacTTCGTGCG-TGGCCTTCCACAACAGCCCCCTCGTATG-----------CACAGGCAGGGTCT-GGGCAG----AGGGAGCGCTTGGTGGATTCCAAAGGCCACTACGCCCTTGGCGGGC-ACTGCAGCTCGCCG--CATCCCTCAGGGACCAGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAACACTGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33679235 291 + 192294377 TGCCGCTGTTC-GTGTGagcctctctccagctcattttccccgtctgtccagcggggtc-tccccacgtaggatcgatgca-aggataggatgagatggtgcatgtgagcaagcttgtaaaacattaactagtacTTCGTGCG-TGGCCTTCCACAACAGCCCCCTCGTATG-----------CACAGGCAGGGTCT-GGGCAG----AGGGAGCGCTTGGTGGATTCCAAAGGCCACTACGCCCTTGGCGGGC-ACTGCAGCTCGCCG--CATCCCTCAGGGACCAGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAACACTGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4445534 291 - 9440265 TGCCGCTGTCC-GTGTGagcctctctccagctcattttccccgtctgtccagcggggtc-tccccacgtaggatcgatgca-aggataggatgagatggtgcatgtgagcaagcttgtaaaacattaactagtacTTCGTGCG-TGGCCTTCCACAACAGCCCCCTCGTATG-----------CACAGGCAGGGTCT-GGGCAG----AGGGAGTGCTTGGTGGATTCCAAAGGCCACTACGCCCTTGGCGGGC-ACTGCAGCTCGCCG--CATCCCTCAGGGACCAGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAACACTGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17035882 291 - 21915920 TGCCGCTGTCC-GTGTGagcttctctccagctcattttccccgttcgtccagcggggtc-tccccacgtaggatcgatgca-aggataggatgagatggtgcatgtgagcaagcttgtaaaatattaactagtacTTCGTGCG-TGGCCTTCCACAACAGCCCCCTCGTGTG-----------CACAGGCAGGGTCT-GGGCAG----AGGGAGTGCTTGGTGGATTCCAAAGGCCACTACGCCCTTGGCGGGC-ACTGCAGCTCGCCG--CATCCCTCAGGGACCAGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAACACTGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 164738 352 - 21531802 TGCCGCCGTCC-GTGTGagcttctctccagctcattttccccgtccgtccagcggggtc-tccccatgtaggatcgacgca-aggataggatgagatggtgcacgtgagcaagcttgtaaaatattagctagtacTTCGTGTG-TGGCCTTCCACAACAGCCCCCTCGTGTG-----------CACAGGCAGGGTCT-GAGCAG----GGGGAGCACTTGGTGGATTCCAAAGGCCACCAGGCCCTTGGCAGGC-ACTGCAGCTCACCG--CGTCCCTCAGGGACCGGTC-------AGCTTTCC---AACACCAGCACTGCAGAGGTGCGGGAGTTCTGTGCGTCCCTCAGGGACCGGTCAGCTTTCCAACACCAGCACTGCAG i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 202718 291 - 2515279 TGCCGCTGTCC-ATGTGagcttctctccagctcattttccccgtccgtccagcggggtc-tctccacgtaggatcgatgca-aggataggatgagatggtgcatgtgagcaagcttgtaaaatattaactagtacTTCGTGCG-TGGCCTTCCACAACAGCCCCCTCGTGTG-----------CACAGGCAGGGTCT-GGGCAG----AGGGAGCGCTTGGTGGATTCCAAAGGCCACTACGCCCTTGGCGGGC-ACTGCAGCTCGCCG--CATCCCTCAGGGACCAGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAACACTGCAG i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 357420 291 + 6586416 TGCCGCTGTCC-GTGTGagcttctctccagctcattttccccatccatccagtggggcc-tcgccacataggatcaacgca-aggataggatgagatggtgcacgtgagcaagcttgtaaaatattaactagtacttcgtGCG-TGGCCTTCCACAACAGCCCCCTCATGTG-----------CACAGGCAGGGTCT-GGGCAG----AGGGAGCGCTTTGTGGATTCCAAAGGCCACCAGGCCCTTGGCAGGC-ACTGCAGCTCACCA--CATCCCTTGGGGACCGGTC-------AGCTTTCC---AACA-------------------------------------------------------------CCAGTACTGCAG i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 92303 284 + 138751 TGCTGCTGCCC-ATGTGagtttctctccagctcattttccccatctgtccagtggggtc-ttgctgcttgggattgatgca-aggataggatgaggtggtgca------------tgtgaaatgttaac-agtgcttTCTGTG-TGGGTTTCCACAACAGCCCCCTCGTGTG-----------CACAGGCAGGGTCT-GAGCAGACAGAGGGAGGGCTCTGTGGATTCCAAAAGCCACCAGGTCCTTGGCAGGC-ACTGCAGCTCACCGCACATCCCTTGGGGATCGGTC-------GGTTTTCC---AACA-------------------------------------------------------------CCAACACTGCAG i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 404974 296 - 2409723 TGGCACTGTCT-GTGTGagtttctctccggctcattttccccatccgtccagtggggtc-tcgctgcttgggatcgatgca-aggataggatgaggtggcgcatgtgagcaagcgtgtgaaatgttaac-agtgctTTCTGCG-TGGGTTTCCACAACAGCCCCCTCGTGTG-----------CACAGGCAGGATCT-GAGCAGAGAGAGGGAGGGCTCTGTGGATTCCAAAATCCACCAGGCCCGTGGCAGGC-ACTGCAGATCACCACACATCCCTCAGGGACCGATT-------GGCTTTCC---AACA-------------------------------------------------------------CCAACGCTGCAG i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 566430 295 - 2125214 TGCCGCTGTCT-GTGTGagtttctctccagctcactttccccatctgcccagtggggtc-ttgctgcttgggatcgatgca-aggataggcagaggtagtgcatgtgaGCAAGCGTGTGAACTGTTAAC-AGTGGTTTCTGTG-TGGGTTTCCACAACAGCCCCCTCGTGTG-----------CACAGGCAGGGTCT-GAGCAGAGAGAGGGAGGGCTCTGT-GATTCCAAAAGCCACCAGGCCCTTGGCAGGC-ACTGCAGCTCACCACACATCCCTCAGAGACTGGTT-------GGCTTTCC---AACA-------------------------------------------------------------CCAGCGCTGCAA i cebCap1.NW_016107703v1 I 50 C 0 s aotNan1.NW_018514293v1 159681 294 + 376347 TGCCGCCGTCC-GTGTGagtttctctccggctcattttccccatctgtccagtggggtc-ttgctgcttgggatcgatgca-aggataggatgaggtggtgcatgtgaaccagcatgtgaaatgttacc-agtgctTGCTGTG-TGGGTTTCCACAGCAGCCCC--CGTGTG-----------CACAGGCAGGGTCT-GAGCAGAGACAGGGAGGGCCCTGTGGATTCGAAAAGCCACCAGGCCCTTGGCAGAC-ACTGCAGCTCACCACACATCCCTCGGGGACCGGTT-------GGCTTTCC---AACA-------------------------------------------------------------TCAACGCTGCGG i aotNan1.NW_018514293v1 I 49 C 0 s otoGar3.GL873611 2292763 279 - 8137123 CGTCGCTGCTTGGTGTGagcctctctacagctcagtttccccatctgttggatggggtc-atgctgctccagaccacaaca-aggatgggatgagat-gggaacgtgagcactcttgtaaaacattaactagtgtcttgtgcattgagcttccaaAGCTGC-CTCTTGTGTG----------CCAAGGGCAGGGTCT-GTGCAC----AGAGGGGGCTTTGTGGACACCGAA-------AGGTCCTTGCTGGGC-ACTGCAGCATCCCA--CA-CCCCCAGGGACCGGTC--------GCCTCCC---AACA-----------------------------------------------------------------CACGATAG i otoGar3.GL873611 C 0 I 12 s canFam3.chr6 61080993 294 - 77573801 TGCTGCTGTCT-GTG-GCacctctctttgcctcagtctccccatctgtcaaatgggcttgtggctactcaggtacattgcatttgttctaataagatgatgcatatgaccaagcttgt-aaatatgaaCTAGttttttttttt-ttttttttttGCACTGCGTGCTTGGAGGGTCACCACTCTCAAGTGCAGGGTCTGGGGTGG----AGGAAGGGCTTTTGGGATTCAAG----------------GGCTGGC----CAAGCTCGCCA--TATCCCTCAGGGAACAAACAGCCTGCAGCTCTCCCTGGACA-------------------------------------------------------------CCCACTGTGCAG i canFam3.chr6 I 28 C 0 e nomLeu3.chr20 212104 776 + 85365473 M a score=5179479.000000 s hg38.chr7_KI270899v1_alt 190095 580 + 190869 AGGTGTGGGAGTTCTGTG-CCAGGAGCTCCCAGAGCAGCTTCAGGGAGAGTGTGGGGCCCCCTGGGACCTGGGGCATCTTTGCCCACCTTAGGAGTGCT---TTGTCCATCTGGACAAG---CTAGGCTTGGCTCACTGCCACCCCTCTTTGGTCCAGCTGTCCCGGGGCAGTGGTGCCCAGGCTGCCTGACATTGCAGGGGTGTGGACAGAGCCC-TTGCCAGGGAATCCCTACCC--CAGGATTC----TGGTGTGGCCTCCGCCTGG--GTGTGTCCTGGTTAATTCCTGTGCCTACT--------GAAGGCCTGCCCCAGCTGATCTCGCTCGCTCGCCTCCTAGACCAT---GCTGGCCACATTGGTTCTCATCCAGTCTTCTGGGGTGGGGACCCGTCCAAGGACAGGCTGGCTGCT--C--AGTCATTC-TGCAGG-GCCAAGCAGGGCCTGCAAGGACGATGGGCAGACACAGCCGCATCACCCAGGCaggacagcaggctctggcccaggagatctgggggtgaatcctggctctgccagccattagccagagtggaagtgggcaaatggattaacgc-ctccagcacctggtttctcaccgaga s panTro5.chr7_NW_015973580v1_random 65455 580 - 83720 AGGCGTGGGAGTTCTGTG-CCAGGAGCTCCCAGGGCAGCTTCAGGGAGAGTGCGGGGCCCCCTGGGACCTGGGGCAGCTTTGCCCACCTTAGGAGTGCT---TTGTCCATCTGGACAAG---CTAGGCTTGGCTCACTGCCACCCCTCTTTGGTCCAGCTGTCCCGGGGCAGTGGTGCCCAGGCTGCCTGACATTGCAGGGGTGTGGACAGAGCCC-TTGCCAGGGAATCCCTACCC--CAGGATTT----TGGTGTGGCCTCCGCCTGG--GTGTGCCCTGGTTAAGTCCTGTGCCTACT--------GAAGGCCTGCCCCAGCTGATCTCGCTCGCTCGCCTCCTAGACCAT---GCTGGCCACATTGGTTCTCATCCAGTCTTCTGGGGTGGGGACCCGTCCAAGGACAGGCTGGTTGCT--C--AGTCATTC-TGCAGG-GCCAAGCAGGGCCTGCAAGGACGATGGGCAGACACAGCCGCATCACCCAGGCAGGACagcaggatctggcccaggagatctgggggtgaatcctggctctgccagccactagccagagtggaagtgggcaaatggattaacgc-ctccagcacctggtttctcaccgaga i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 579852 578 + 162613886 AGGTGTGGGAGTTCTGTG-CCAGGAGCTCCCAGGGCAGCTTCAGGGAGAGTGCGGGGCCCCCTGGGACCTGGGGCAGCTTTGCCCACCTTAGGAGTGCT---TTGTCCATCTGGACAAG---CTAGGCTTGGCTCACTGCCACCCCTCTTTGGTCCAGCTGTCCCGGGGCAGTGGTGCCCAGGCTGCCTGACATTGCAGGGGTGTGGACAGAGCCC-TTGCCAGGGAATCCCTACCC--CAGGATTC----TGGTGTGGCCTCCGCCTGG--GTGTGCCCTGGTTAAGTCCTGTGCCTACT--------GAAGGCCTGCCCCAGCTGATCTCACTCGCTCGCCTCCTAGACCAT---GCTGGCCACATTGGTTCTCATCCAGTCTTCTGGGGTGGGGACCCGTCCAAGGACAGGCTGGTTGCT--C--AGTCATTC-TGCAGG-GCCAAGCAGGGCCTGCAAGGACGATGGGCAG--ACAGCCGCATCACCCAGGCAGGACagcaggatctggcccaggagatctgggggtgaatcctggctctgccagccactagccagagtggaagtgggcaaatggattaacgc-ctccagcacctggtttctcaccgaga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 151505 580 - 432965 AGGTGTGGGAGTTCTGTG-CCAGGAGCTCCCAGAGCAGCTTCAGGGAGAATGCGGGGCCCCCTGGGACCTGGGGCAGCTTTGCCCACCTTAGGAGTGCT---TTGTTCATCTGGACAAG---CTAGGCTTGGCTCACTGCCACCCCCCTTTGGTCCAGCTGTCCCCGGGCAATGGTGCCCAGGCTGCCTGACATTGCAGGGGTGTGGACAGAGCCC-TTGCCAGGGAATCCCTACCC--CAGGATTC----TGGTGTGGCCTCCACCTGG--GTGTGCCCTGGTTAAGTCCTGTGCCTACT--------GAAGGCCTGCCCCAGCTGATCTCGCTCGCTCGCCTCCTAGACCAT---GCTGGCCACATTGGTTCTCATCCAGTCTTCTGGGGTGGGGACCCGTCCAAGGACAGGCTGGTTGCT--C--AGTCATTC-TGCAGG-GCCAAGCAGGGCCTGCAAGGACGATGGGCAGACACAGCCGCATCACCCAGGCAGGACagcaggatctggcccaggagatctgggggtgaatcctggctctgccagccactagccagagtggaagtgggcaaatggattaacgc-ctccagcacctggtttctcactgaga i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 212880 567 + 85365473 AGGGGTGGGAGTTCTGTG-CCAGGAGCCCCTAGACCAGCTTCAGGGAGAGTGTGGGGCCTCCTGGGACCTGGGGCAGCTTCGCCCACCTCAGGAGTCCT---TTGTCCATCTGGACAGG----GAGGCTTGGCTCACTGCCACCCCGCTTTGGTCCAGCTGTCCCAGGGCAGTGGTGCCCAGGCTGCCTGACATTGCAGTGGTGTGGACAGAGCCC-TTGCCAGGGAATCCCTACCC--CAGGGTTC----TGGTGTGGCCTCCGCCTGG--GT-TGCCCTGGTTAAGTCCTGTGCCTATC--------AAAGGGCTGCCCCAGCTGATCTCGCTCGCTCGCCTCCTAGACCAT---GCTGGCCACAATGG-------------TCTAGGAGTGGGGGCCCGTCCGAGGACAGGCTGGTTGCT--CAGAGTCATTC-TGCATG-GCCAAGCAGGGCCTGCAAGGACGATGGGCAGACACAGCCCCATCACCCAGGCAGGACagcaggatctggcccaggagatctgggggtgaatcctggctctgccagccactagccagagcggatgtgggcaaatggatcaaccc-ctccagcacttggtttctcactgaga i nomLeu3.chr20 M 776 C 0 s rheMac8.chr3 34061588 570 + 185818997 AGGTGCGGGAGTTCTGTGCCCAGGAGCTCCTAGAGCGGCTTCAGGGAGAGTGCGGGGCCT-CTGGGACCTGGGGCAGCTTTGCCCACCTTAGGAGCCCT---TTGTCCATCTGGACAGG---CTAGCCCTGGGTCACTGCCA-CCCCCTTTGGTCCAGCTGCCCCAGGGCAGTGGTGCCCAGGCTGCCTGACATTGCGGTAGTGTGGACAAAGCCT-TTGCCAGGGAATCCCTGCCC--CAGGGTTC----TGGTGTGGCCTCCGCCTGG--GTGTGCCCTGG-TAAGTCCTGTGCCTACT--------GAAGGGCTGCCCGAGTGGATCTCGCTCGCCCGCCTCCTAGGCCAC---ATTGGCCACACTGGTTCTAATCCTGTCTTCTTGGGTGGGGGCCCATCCGAGGACAGGCTTGGTGCTGAC--AGTCATTC-T-----------GCAGGGCCTGCAAGGAGGGCGAGTGGACACAGCTCCGTCACCCAGGCGGGACAGcaggctctggcccaggagatctgggggtgaatcctggctctgccggccactagccagagcggaactgggcaaatggattaaccc-ctccagcacctggcttctcgctgaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33679526 570 + 192294377 AGGTGCGGGAGTTCTGTGCCCAGGAGCTCCTAGAGCGGCTTCAGGGAGAGTGCGGGGCCT-CTGGGACCTGGGGCAGCTTTGCCCACCTTAGGAGCCCT---TTGTCCATCTGGACAGG---CTAGCCCTGGGTCACTGCCA-CCCCCTTTGGTCCAGCTGCCCCAGGGCAGTGGTGCCCAGGCTGCCTGACATTGCGGTAGTGTGGACAAAGCCT-TTGCCAGGGAATCCCTGCCC--CAGGGTTC----TGGTGTGGCCTCCGCCTGG--GTGTGCCCTGG-TAAGTCCTGTGCCTACT--------GAAGGGCTGCCCGAGCTGATCTCGCTCGCCCGCCTCCTAGGCCAC---ATTGGCCACACTGGTTCTAATCCTGTCTTCTTGGGTGGGGGCCCATCCGAGGACAGGCTTGGTGCTGAC--AGTCATTC-T-----------GCAGGGCCTGCAAGGAGGGCGAGTGGACACAGCCCCGTCACCCAGGCGGGACAGcaggctctggcccaggagatctgggggtgaatcctggctctgccggccactagccagagcggaactgggcaaatggattaaccc-ctccagcacctggcttctcgctgaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4445825 570 - 9440265 AGGTGCGGGAGTTCTGTGCCCAGGAGCTCCTAGAGCGGCTTCAGGGAGAGTGCGGGGCCT-CTGGGACCTGGGGCAGCTTTGCCCACCTTAGGAGCCCT---TTGTCCATCTGGACAGG---CTAGCCCTGGGTCACTGCCA-CCCCCTTTGGTCCAGCTGCCCCAGGGCAGTGGTGCCCAGGCTGCCTGACATTGCGGTAGTGTGGACAAAGCCT-TTGCCAGGGAATCCCTGCCC--CAGGGTTC----TGGTGTGGCCTCTGCCTGG--GTGTGCCCTGG-TAAGTCCTGTGCCTACT--------GAAGGGCTGCCCGAGCTGATCTCGCTCGCCCGCCTTCTAGGCCAC---ATTGGCCACACTGGTTCTAATCCTGTCTTCTTGGGTGGGGGCCCATCCGAGGACAGGCTTGGTGCTGAC--AGTCATTC-T-----------GCAGGGCCTGCAAGGAGGGCGAGTGGACACAGCCCTGTCACCCAGGCGGGACAGcaggctctggcccaggagatctgggggtgaatcctggctctgccggccactagccagagtggaactgggcaaatggattaaccc-ctccagcacctggcttctcgctgaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17036173 570 - 21915920 AGGTGCGGGAGTTCTGTGCCCAGGAGCTCCTAGAGCGGCTTCAGGGAGAGTGCGGGGCCT-CTGGGACCTGGGGCAGCTTTGCCCACCTTAGGAGCCCT---TTGTCCATCTGGACAGG---CTAGCCCTGGGTCACTGCCA-CCCCCTTTGGTCCAGCTGCCCCAGGGCAGTGGTGCCCAGGCTGCCTGACATTGCGGTAGTGTGGACAAAGCCT-TTGCCAGGGAATCCCTGGCC--CAGGGTTC----TGGTGTGGCCTCCGCCTGG--GTGTGCCCTGG-TAAGTCCTGTGCCTACT--------GAAGGGCTGCCCGAGCTGATCTCACTCGCCCGCCTCCTAGACCAC---GTTGGCCACACTGGTTCTAATCCTGTCTTCTTGGGTGGGGGCCCATCTGAGGACGGGCTTGGTGCTGAC--AGTCATTC-T-----------GCAGGGCCTGCAAGGAGGGCGAGTGGACACAGCCCCGTCACCCAGGCGGGACAGcaggctctggcccaggagatctgggggtgaatcctggctctgccggccactagccagagcggaactgggcaaatggattaacct-ctccagcacctggcttctcgctgaga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 165090 573 - 21531802 AGGTGCGGGAGTTCTGTGCCCGGGAGCTCCTAGAGCGGCTTCAGGGAGAGTGCGGGGCCTCCTGGGGCCTGGGGCAGCTTTGCCCACCTTAGGAGCCCT---TTGTCCATCTGGACAGA---CTAGCCCTGGATCACTGCCACCCCCCTTTGGTCCAGTTGCCCCAGGGCAGTGGTGCCCAGGCTGCCTGACATTGCGGTAGTGTGGACAAAACCT-TTGCCAGGGAATCCCTACCC--CAGGGTTC----TGGTGTGGCCTCTGCCTGG--GTGTGCCCTGGTTAAGTCCTGTGCCTACC--------GAAGGGCTGCCCGAGCTGATCTCGCTCGCCTGCCTCCTAGACCAC---GTTGGCCACATTGGCTCCAATCCTGTCTTCTTGGGTGGGGGCCCATCCGAGGACAGGCTTGGTGCTGAC--AGTCACTC-T-----------GCAGGGCCTGCAAGGAAGGTGAGCGGACACAGCCCCGTCACCCAGGCaggacagcaggctctggcccaggagacctgggggtgaatcctggctctgccggccactagccagagcagaactgggcaaatggatgaaccc-ctccagcaccgggcttctcactgaga i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 203009 570 - 2515279 AGGTGCGGGAGTTCTGTGCCCAGGAGCTCCTAGAGCGGCTTCAGGGAGAGTGCGGGGCCT-CTGGGACCTGGGGCAGCTTTGCCCACCTTAGGAGCCCT---TCGTCCATCTGGACAGG---CTAGCCCTGGGTCACTGCCA-CCCCCTTTGGTCTAGCTGCCCCAGGGCAGTGGTGCCCAGGCTGCCTGACATTGCGGTAGTGTGGACAAAGCCT-TTGCCAGGGAATCCCTGGCC--CAGGGTTC----TGGTGTGGCCTCCGCCTGG--GTGTGCCCTGG-TAAGTCCTGTGCCTACT--------GAAGGGCTGCCCGAGCTGATCTCGCTCGCCCGCCTCCTAGACCAC---GTTGGCCACACTGGTTCTAATCCTGTCTTCTTGGGTGGGGGCCCATCTGAGGACTGGCTTGGTGCTGAC--AGTCATTC-T-----------GCAGGGCCTGCAAGGAGGGCGAGTGGACACAGCCCCGTCACCCAGGCGGGACAGcaggctctggcccaggagatctgggggtgaatcctggctctgccggccactagccagagcggaactgggcaaatggattaaccc-ctccagcacctggcttctcgctgaga i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 357711 573 + 6586416 AGGTGCGGGAGTTCTGTGCCCAGGAGCTCCTAGAGCGGCTTCAGGGAGAATGTGGGGCCTCCTGGGACCTGGGGCAGCTTTGCCCACCTTAGGAGCCCT---TTGTCCACCTGGACAGG---CTAGCCTTGGGTCACTGCCA-CCCCCTCTGGTCCAGCTGTTCCAGGGCAGTGGTGCCCAGGCTGCCTGACATTGCGGTGGTGTGGATGGAGCAT-TTGCCAGGGAATCCCTGCCC--CAGGGTTC----TGGTGTGGCCTCCGCCTGG--GTGTGCCCTGGTTAAGTCCTGTGCCTACT--------GAAGGGCTGCCCGAGCTGATCTCGCTTGCTCACCTCCTCGACCAC---GTTGGCCACGTTGGTTCTAATCCTGTCTTCTTGGGTGGGGGCCCATCCGAGGACAGGCTTGGTGCCCAC--AGTCATCCAA-----------GCAGGGCCTGCGACGAAGGTGAGCGGACACAGTCCCGTCACCCAGGCGGGACAGcaggctctggcccgggagatctgggggtgaatcctggctctgccggccactagccagagcggaactgggcaaatggatgaaccc-ctccagcacctggcttctcgctgaga i colAng1.NW_012117710v1 C 0 I 27 s calJac3.chrUn_GL286444 92587 555 + 138751 CGCTGCAGGAGTTCTGTGCCCAGGAGCTCCTAGAGCAGCCTCAGGGAAAGCGCAGGGCCTCCTGGGACCTCGGGCAGCTTTGCCCACCTCAGGAGTCCT---CTGTCCATCTGGGCAGG---CTGGCCTCAGGTCCCTGCGA-CCCTCTTGGGTCCAACTGTCCCAGGGCAGTGGTGCCTCGGCTGCCTGACATTGCAGTGCCATGGATGGAGCCC-TTGCTGGAGAATCCCTACCC--CAGGGCTC----TGGCACAGCCTAC------------------------------TCCTTCC--------AAAAAGCTGCCTGAGCTGATCTCGCTTGCATGCCTCCTAGACCGT---GCTGGCCACTTTGATTCTAGTTCAGTCTTCTTGGGTTGGGGCCCATCCGAGGACAGATTGGTTGCTCAC--AGTCATTC-TGCAAGTGCCCAGCAGGGCCTGCAGGGAAGATGGGCAGACAAAGCCCCAGCACCCAGGCAGGACagcaggatctggcccaggggatctggatgtgaatcctggttctgccagccactaaccagagaggcactgggcaaacggattaacct-ctccagcatgtggtttctcacctaga i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 405270 555 - 2409723 CACTGCAATGGTTCTGTGCCCAGGAGCTCCTAGAGCAGCCTCAGGGAAAGCACAGGGCCTCCTGGGACCTTGGGCAGCTTTGCCCACCTCAGGAGTCCT---CTGTCCATCTGGGCAGG---CTGGCCTCAGGTCAGTGCCA-CCCACTTGGGTCCGACTGTCCCAGGGCAGTGGTGCCTCGGCTGCCTGACATTGCAGTGCCTTGGATGGAACCC-TTGCCAGAGAATCCCTACCC--CAGGGCTC----TGGCACGGCCTAC------------------------------TCCTACC--------AGGGGGCTGCCTGAGCTGATCTCGCTTGCATGCCTACTAGACCTT---GCTGGCCACGTTTATGCTAGTTCAGTCTTCTTGGGTGGGGGCCCATCCAAGGACAGATGGGTTGCTCAC--AGTCATTC-TGCAAATGTCCAGCAGGGCCTGCAGGGAAGATGGGCAGACAAAGCCCCAGCACCCAGgcaggacagcaggatctggcccaggggatctggatgcaaatcctggctctgccagccactagccagagcggcactgggcaaacggattaaccc-ctccagcgtgtggtttctcacctaga i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 566725 554 - 2125214 TGCTGTAGGAGTTCTGTGCCCAGGAGCTCCTAGAGCAGCCTCA-GGAAAGCGCAGGGCCTCCTGGGACCTTGGGCAGCTTTGCCCAACTTAGCAGTCCT---CTGTCCATCTGGGCAGG---CTGGCCTCAGGTCACTGCCA-CCCCCTTGGGTCCGAGTGTCCCAGGGCAGTGGTGCCTCGGCTGCCTGACATTGCAGTGCCTTGGATGGAACCC-TTGCCAGAGAATCCCTACCC--CAGGGCTC----TGGCACGGCCTAC------------------------------TCCTACG--------AGAGGGCTGCCTGAGCTGATCTCGCTTGCATGCCTCCTAGACCTT---GCTGGCCAGGTTGATTCTAGTTCAGTCTTCTTGGGTGGGGGCCCATCCAAGGACAGATGAGTTGCTCAC--AGTCATTC-TGCAAGTGCCCAGCAGGGCCTGCAGGGAAGATGGGCAGACAAAGCCCCAGCACCCAGGCAGGACagcaggatctggcccaggggatctggatgtgaatcctggctctgccagccactagccagagcggcactaggcaaacggattaatcc-ctccagcatgtggtttctcacctaga i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 159975 528 + 376347 CGCTGCAGAAGTTCTGTGCCCGGGAGCTCCTAGAGCAGCCTCAGGGAA---------------------------AGCTCTGCCCACCTCGGGAGTCCT---CTGTCCATCTGCGCAGG---CTGGCCTCAGGTCACTGCCA-CCCCCTTGGGTCCGACCGTCCCAGGGCAGTGGTGCCTCGGCTGCCTGACATTGCAGTGCCGTGGATGGAGCCC-TTGCCCGAGAATCCCTGCCC--CAGGGCTC----CGGCACGGCCTAC------------------------------CCCTACC--------A-AAGGCTGCCTGAGCTGATCTCGCTTGCATGCCTCCTAGACCTCCAGACAGGCCACGTTGACTCCAGTTTAGTCTTCTTGGGCGGGGGCCCATCCAAGGACAGATTGGTTGCTCAC--AGTCATTC-TGCAAGTGCCCA-CAGGGCCTGCAGGGAAGATGGGCAGACGAAGCGCCAGCACCCAGGCAGGACGGCAggatctggcccaggggatctggatgtgag-cctggctctgccagccactagccagagcggccctgggcggacggattaaccg-ctacagcacgtggtttctcacctagg i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2293054 561 - 8137123 TGCAGAGGGAATTCAGTGCCCAGGAGCTCAGAGAGCAGCTGCAGGGAAAGGGCAAGATCT---------CGGGGCAGCTTTGCCCACCTTGGGGATCTT------TCTGTCCCAATGTA---CTGGCCTTGGGACATCCTC--CCCACTGTGGTGTGACTAT-CTAGGACATTGATGCCTACACTGCCTGACTTCAAAGTGTGGTGCACAGAGCCTATTGCCAGGGAATCCCAGCCC--CAGGGCTC----TGGCATGGCTTTGGCCTGGCCATGTGCCCTGGTTACATCCAGTGCCTGTCTGCTTGCAGAGGGGCCGTCCAAGCTGTTGTCTCTTG---ATCTCTTAGATCAC---ACCAGCTGGGTTGGTTCTCATCCAGTCTTCCCAGGGTGGGGCCCATCTGAGGGCTGGGTGGTTGTT--C--AGTCCTGC-TGCAGGTGCCTAGCAGGG-TTGGAAGGCAAATCAACGA-------------ATTGGAGCAGGACAGGAGGAtctgcaccagagggtctggg-gtgctccccagctccacaagtcactagccagagtgactttgggaaaatagattggccctctggtgcctctggtttctcacctgga i otoGar3.GL873611 I 12 C 0 s canFam3.chr6 61081287 438 - 77573801 ---------AGGACAGGGCCCAGCAGCTCAGGGAGCAGCTAGAGTGAGAAGACA-GACCT-CTGGGGCTCACAGGCATGTTGCCCACCCTCAGTGTCCTCCTCTCTCTGTCTCCCCAGGGGCCTGTCTTTGAGGCGCCGCCTACCCACAGTAGTCTGACTGCCCT-GGGCAGTGGTGCCTAGGCTGCCTGAC-------CACAGTGGACTGAGCCT-GTGCCTGGGGATCCCATCCTGGCGGGATGCTTGGTGGTGTGAC-------TGGGAATGTGTCCTTG-----CCCATTGTCT-CT--------GGTGGGCTGTCTGTGTTTCTGCCACTCA-----CGCCTGGACTGC---CCTGGCCAAGCTGGTCC---------------------------------------------TGCC--C--AGTCACCA-T-----------GTAGGACCT--------AATTGGTA-----------------CTGGAAGGTTGACTGATTC-----------ATCTGTGTGTG---------------------------gtgtgagtctgggcaagtggattaac---ctctatgctctgggttctcacatgga i canFam3.chr6 C 0 C 0 a score=218358.000000 s hg38.chr7_KI270899v1_alt 190675 32 + 190869 acacagagaaggttataatctggacctggtaT-- s panTro5.chr7_NW_015973580v1_random 66035 32 - 83720 acacagagaaggttataatctggacctggtaT-- i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 580430 32 + 162613886 acacagagaaggttataatctggacctggtaT-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 152085 32 - 432965 acacagagaaggttatagtctggacctggtat-- i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 213447 32 + 85365473 acacagagaaggttataATCTGGACCCGGTAT-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34062158 31 + 185818997 acatagagacagttataatccggaccccgta--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33680096 31 + 192294377 acagagagacagttataatccggaccccgta--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4446395 31 - 9440265 acagagagacagttataatccggaccccgta--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17036743 31 - 21915920 acatagagacaattataATCCGGACCCCGTA--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr28 165663 31 - 21531802 acatagagacagttataatccggaccccgta--- i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 203579 31 - 2515279 acatagagacagttataatccggaccccgta--- i manLeu1.NW_012101810v1 C 0 C 0 s calJac3.chrUn_GL286444 93142 31 + 138751 acgtagagatggtcataatctggaccctgta--- i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 405825 31 - 2409723 gcgtagagatggtcataatctggaccctgtg--- i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 567279 31 - 2125214 atgtagagatgttcataatctggaccctgta--- i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 160503 31 + 376347 acgtagagatggtcataatctggaccctgta--- i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2293615 26 - 8137123 acatggag-tggttataatCTAGACTC------- i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61081725 32 - 77573801 acataaagatggt-gtaacctagtacctatc-at i canFam3.chr6 C 0 C 0 e colAng1.NW_012117710v1 358284 27 + 6586416 I a score=1582952.000000 s hg38.chr7_KI270899v1_alt 190707 160 + 190869 AATCTGGACTCTGACTTACAAATCTGAATGCCAAGCAAAACCCATTCACTAGCGAAAACTGACTCAGGCTGAACGTATTTAGGGGC-AAAACCTAAATTGTCGAGGCTAGTT-AAAAGTCCTGATTTTTCTCTGTTACATTGAATAGTCACATGTTCCTCTG s panTro5.chr7_NW_015973580v1_random 66067 160 - 83720 AATCTGGACTCTGACTTACAAATCTGAATGCCAAGCAAAACCCATTCACTAGCAAAAACTGACTCAGGCTgaacgtatttaggggc-aaaacctaaattgtcgaggctagtt-aaaagtcctgatttttctctgttacagtgaatagtcacatgttcctctg i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 580462 160 + 162613886 AATCTGGACTCTGACTTACAAATCTGAATGCCAAGCAAAACCCATTCACTAGCAAAAACTGACTCAGGCTgaacgtatttaggggc-aaaacctaaattgtcgaggctagtt-aaaagtcctgatttttctctgttacagtgaatagtcacatgttcctctg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 152117 156 - 432965 agtctggactctgacttacaaatctgaatgccaagcaaAACCCATTCACTAGCAAAAGCTGACTCAGGCTGAACGTATTTAGGGGC-AAAACCTAAATTGTCGAGGC----T-AAAAGTCCTGATTTTCCTCTGTTACAGTGAACAGTCACATGTTGCTCTG i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 213479 160 + 85365473 AATCTGGACTCTGACTTACAAATCCGAATGCCAAGTAAAACCCATTCACCAGCAAAAAGTAACTCAGGCTgaacgtatttagggga-aaaacctaaattgtcgaggctagtt-aaaagtcccgatttttctctgttccagtgaatattcacgtgttcctctg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34062189 147 + 185818997 ------ACCTCTGACTTACAAATCTGAATGCCAAACAAaacccattcattagcaaaacctgactcaagctgaacggatttgggggc-agaac-------gccgaggctagtt-aaaaatccttatttttctctcttacggtgaatattcacgtgttcctctg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33680127 147 + 192294377 ------ACCTCTGACTTACAAATCTGAATGCCAAACAAaacccattcattagcaaaacctgactcaagctgaacggatttgggggc-agaac-------gccgaggctagtt-aaaaatccttatttttctctcttacggtgaatattcacgtgttcctctg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4446426 147 - 9440265 ------ACCTCTGACTTACAAATCTGAATGCCAAACAAaacccattcattagcaaaacctgactcaagctgaacggatttgggggc-agaac-------gccgaggctagtt-aaaaatccttatttttctctcttacggtgaatattcacgtgttcctctg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 17036774 147 - 21915920 ------ACCTCTGACTTACAAATCTGAATGCCAAACAAaacccattcattagcaaaacctgactcaagctgaacggatttgggggc-agaac-------gccgaggctagtt-aaaaatccttatttttctctcttacagtgaatattcacgtgttcctctg i cerAty1.NW_012002954v1 C 0 N 0 s chlSab2.chr28 165694 148 - 21531802 ------ACCTCTGACTGACAAATCTGAATGACAAACAAaacccattcattagcaaaacctgactcaagctgaatggatttgggggc-agaac-------gccgaggctagttaaaaaatccttatttttctctctcacagtgaatattcacgtgtccctctg i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 203610 147 - 2515279 ------ACCTCTGACTTACAAATCTGAATGCCAAACAAaacccattcattagcaaaacctgactcaagctgaacggatttgggggc-agaac-------gccgaggctagtt-aaaaatccttatttttctctcttacagtgaatattcacgtgttcctctg i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 358311 153 + 6586416 AATGTAACCTCTGACTTACAAATCTGAATGCCAAACAAaacccattcattagcaaaacctgactcaagctgaatggatttgggggc-agaac-------gccgaggctagtt-aaaaatgcttatttttctctctcacagtgaatattcacgtgtccctctg i colAng1.NW_012117710v1 I 27 C 0 s calJac3.chrUn_GL286444 93173 156 + 138751 ------acctcTGACTTGCAAATCTGAATGCCATACAAAACCCATTCACTGGCAAAACCTGACTCAACCTgaacttatttgggggcaaaaacctaaattgttgaggctagttaaaaaatccttattttcctcttttacagtgaatattcacatgttcctctg i calJac3.chrUn_GL286444 C 0 C 0 s saiBol1.JH378296 405856 155 - 2409723 ------acctctgacttgcaaatctgaATGCCACACAAAACTCGTTCACTGGCAAAACCTGACTCAACCTgaacttatttgggggc-caaacctaaattgtcaaggctagttaaaaaatccttattttcctcttttacagtgaatattcacatgttcctctg i saiBol1.JH378296 C 0 C 0 s cebCap1.NW_016107703v1 567310 155 - 2125214 ------acctctgacttgcaaatctgaatgccacacaaaacctGTTCACTGGCAAAACCTGACTCAACCTgaacttatttgggggc-aaaacctaaattgttgaggctagctaaaaaatccttattttcctcttttacagtgaatattcacatgttcctctg i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 160534 155 + 376347 ------acctcTGGCTTGCGAATCCGAATGCCACACAAAACCCGTTCACTGGCAAAGCCTGACTCAACCTgaacttatttgggggc-aaaacctaaattgttgaggccagtttaaaaatccttattttcctctttcacagtgaatattcacgtgttcctctg i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2293641 156 - 8137123 --TCAaacctccaacttgcaaatctgaaatcccagcaaaacccatttgacagcaaaacttgactcatcctgaacttatttggaggc-aaaacctaatt-gtctaggcttgtt-ctaaatccttatttttctgtcttggagtgaat-ctcacatgttcctctg i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61081757 149 - 77573801 --------ctctggcttgCAAAtctgaaatccaaacataacttgttca---gcaaaatctgactcaacctgaacttatatgggagc-aaaacctaaattgacaaagctattt-ataaatccttatttttctcacttggagcgaatattcacatgttcctctg i canFam3.chr6 C 0 C 0 a score=12376.000000 s hg38.chr7_KI270899v1_alt 190867 1 + 190869 A s panTro5.chr7_NW_015973580v1_random 66227 1 - 83720 a i panTro5.chr7_NW_015973580v1_random C 0 C 0 s panPan2.chr7 580622 1 + 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01015914v1 152273 1 - 432965 A i gorGor5.CYUI01015914v1 C 0 C 0 s nomLeu3.chr20 213639 1 + 85365473 a i nomLeu3.chr20 C 0 C 0 s rheMac8.chr3 34062336 1 + 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 33680274 1 + 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 4446573 1 - 9440265 a i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr28 165842 1 - 21531802 a i chlSab2.chr28 C 0 C 0 s manLeu1.NW_012101810v1 203757 1 - 2515279 a i manLeu1.NW_012101810v1 C 0 C 0 s colAng1.NW_012117710v1 358464 1 + 6586416 a i colAng1.NW_012117710v1 C 0 C 0 s calJac3.chrUn_GL286444 93329 1 + 138751 a i calJac3.chrUn_GL286444 C 0 N 0 s saiBol1.JH378296 406011 1 - 2409723 a i saiBol1.JH378296 C 0 N 0 s cebCap1.NW_016107703v1 567465 1 - 2125214 a i cebCap1.NW_016107703v1 C 0 C 0 s aotNan1.NW_018514293v1 160689 1 + 376347 a i aotNan1.NW_018514293v1 C 0 C 0 s otoGar3.GL873611 2293797 1 - 8137123 a i otoGar3.GL873611 C 0 C 0 s canFam3.chr6 61081906 1 - 77573801 a i canFam3.chr6 C 0 C 0 a score=10500.000000 s hg38.chr7_KI270899v1_alt 190868 1 + 190869 G s panTro5.chr7_NW_015973580v1_random 66228 1 - 83720 g i panTro5.chr7_NW_015973580v1_random C 0 N 0 s panPan2.chr7 580623 1 + 162613886 g i panPan2.chr7 C 0 N 0 s gorGor5.CYUI01015914v1 152274 1 - 432965 G i gorGor5.CYUI01015914v1 C 0 N 0 s nomLeu3.chr20 213640 1 + 85365473 g i nomLeu3.chr20 C 0 N 0 s rheMac8.chr3 34062337 1 + 185818997 g i rheMac8.chr3 C 0 N 0 s macFas5.chr3 33680275 1 + 192294377 g i macFas5.chr3 C 0 N 0 s macNem1.NW_012019910v1 4446574 1 - 9440265 g i macNem1.NW_012019910v1 C 0 N 0 s chlSab2.chr28 165843 1 - 21531802 g i chlSab2.chr28 C 0 N 0 s manLeu1.NW_012101810v1 203758 1 - 2515279 g i manLeu1.NW_012101810v1 C 0 N 0 s colAng1.NW_012117710v1 358465 1 + 6586416 g i colAng1.NW_012117710v1 C 0 N 0 s cebCap1.NW_016107703v1 567466 1 - 2125214 g i cebCap1.NW_016107703v1 C 0 N 0 s aotNan1.NW_018514293v1 160690 1 + 376347 g i aotNan1.NW_018514293v1 C 0 N 0 s otoGar3.GL873611 2293798 1 - 8137123 g i otoGar3.GL873611 C 0 N 0 s canFam3.chr6 61081907 1 - 77573801 g i canFam3.chr6 C 0 N 0