##maf version=1 scoring=roast.v3.3 a score=414040.000000 s hg38.chr9_KI270719v1_random 0 39 + 176845 GAATTCACTCAGCAGTCAGAAGAAAAGGAAGCCTCTTGT s panTro5.chr4 135027184 39 + 194502333 GAATTCACTCAGCAGTCAGAAGAAAAGGAAGCCTCTTGT i panTro5.chr4 N 0 C 0 s gorGor5.CYUI01001450v1 7871 39 - 70559 GAATTCACTCAGCAGTCAGAAGAAAAGGAAGCCTCTTGT i gorGor5.CYUI01001450v1 N 0 C 0 s nomLeu3.chr7b 90421089 39 - 115148730 GAATTCACTCAGCAGTCAGAAGAAAAGGAAGCCTCTTGT i nomLeu3.chr7b N 0 C 0 s rheMac8.chr5 131358608 39 + 190429646 GAATTCACTCAGCAGTCAGAAGAAAAGCAAGCCTCTTGC i rheMac8.chr5 N 0 C 0 s macFas5.chr5 130877366 39 + 189454096 GAATTCACTCAGCAGTCAGAAGAAAAGCAAGCCTCTTGC i macFas5.chr5 N 0 C 0 s macNem1.NW_012010911v1 34868688 39 - 40319822 GAATTCACTCAGCAGTCAGAAGAAAAGCAAGCCTCTTGC i macNem1.NW_012010911v1 N 0 C 0 s cerAty1.NW_012000798v1 4422341 39 - 9219162 GAATTCACTCAACAGTCAGAAGAAAAGCAAGCCTCTTGC i cerAty1.NW_012000798v1 N 0 C 0 s chlSab2.chr7 78950076 39 + 135778131 GAATTCACTCAGCAGTCAGAAGAAAAGCAAGCCTCTTTC i chlSab2.chr7 N 0 C 0 s manLeu1.NW_012103277v1 2714685 39 - 3013352 GAATTCACTCAACAGTCAGAAGAAAAGCAAGTCTCTTGC i manLeu1.NW_012103277v1 N 0 C 0 s colAng1.NW_012114544v1 5950802 39 + 8656713 GAATTCACTCAGCAGTCAGAAGAAAAGCAAGCCTCTTGC i colAng1.NW_012114544v1 N 0 C 0 s calJac3.chr3 129381516 39 - 190850796 GAATTCACTCAGCAGTCAGAGGAAAAGGAAGCCTCTTGT i calJac3.chr3 N 0 C 0 s saiBol1.JH378129 6465321 39 - 25294431 GAATTCACTCAGCAGTCAGAGGAAAAGGAAGCCTCTTGT i saiBol1.JH378129 N 0 C 0 s cebCap1.NW_016107420v1 4021113 39 - 6311556 GAATTCACTCAGCAGTCAGAGGAAAAGGAAGCCTCTTGT i cebCap1.NW_016107420v1 N 0 C 0 s aotNan1.NW_018507635v1 14874161 39 + 15034901 GAATTCACTCAGCAGGCAGAGGAAAAGGAAGCCTCTTGT i aotNan1.NW_018507635v1 N 0 C 0 s otoGar3.GL873702 896739 39 - 3201129 GAATTCACCCAGTAGCCAGAGAAAAATGGAGCCCCTCAT i otoGar3.GL873702 N 0 I 3 s canFam3.chr19 43991099 39 - 53741614 gaattcacccagcagctgaagaaaaagggactgccttat i canFam3.chr19 N 0 C 0 a score=29223.000000 s hg38.chr9_KI270719v1_random 39 2 + 176845 TG s panTro5.chr4 135027223 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 7910 2 - 70559 TG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421128 2 - 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131358647 2 + 190429646 TG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130877405 2 + 189454096 TG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34868727 2 - 40319822 TG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4422380 2 - 9219162 TG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78950115 2 + 135778131 TG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2714724 2 - 3013352 TG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5950841 2 + 8656713 TG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129381555 2 - 190850796 TG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465360 2 - 25294431 TG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021152 2 - 6311556 TG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874200 2 + 15034901 TG i aotNan1.NW_018507635v1 C 0 C 0 s tarSyr2.KE944182v1 180931 2 - 1108378 TG i tarSyr2.KE944182v1 N 0 I 10566 s otoGar3.GL873702 896781 2 - 3201129 TG i otoGar3.GL873702 I 3 C 0 s canFam3.chr19 43991138 2 - 53741614 tg i canFam3.chr19 C 0 I 3 a score=878807.000000 s hg38.chr9_KI270719v1_random 41 92 + 176845 GAATTCATACTAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGAGAGGACTAGAACTGCAGGTGCAAGTAGAAGTTGGTGTCCAAAAAGAAGTGTA s panTro5.chr4 135027225 92 + 194502333 GAATTCATACTAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGAGAGGACTAGAACTGCAGGTGCAAGTAGAAGTCAGTGTCCAAAAAGAAGTGTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 7912 92 - 70559 GAATTCATACTAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGAGAGGACTAGAACTGCAGGTGCAAGTAGAAGTCAGTGTCCAAAAAGAAGTGTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421130 92 - 115148730 AAATTCATACCAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGACAGGAATAGAACTGCAGGTGCGAGTAGAAGTCAGTGTCCAAAAAGGAGTGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131358649 92 + 190429646 GAATTCACACTAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGAAAGGAATAGAACTGCAGGTGCAAGTAGAAGTCAGTGTCCAAAAAGAAGTATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130877407 92 + 189454096 GAATTCACACTAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGAAAGGAATAGAACTGCAGGTGCAAGTAGAAGTCAGTGTCCAAAAAGAAGTATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34868729 92 - 40319822 GAATTCACACTAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGAAAGGAATAGAACTGCAGGTGCAAGTAGAAGTCAGTGTCCAAAAAGAAGTATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4422382 92 - 9219162 GAATTCACACTAAGAAGAT-------CAGAGAGTGTAGTGGAAAAGAAAGGAATAGAACTGCAGGTGCAAGTAGAAGTCAGTGTCCAAAAAGAAGTATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78950117 92 + 135778131 GAATTCACACTAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGAAAGGAATAGAACTGCAGGTGCAAGTAGAAGTCAGTGTCCAAAAAGAAGTATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2714726 92 - 3013352 GAATTCACACTAAGAAGAT-------CAGAGAGTGTAGTGGAAAAGAAAGGAATAGAACTGCAGGTGCAAGTAGAAGTCAGTGTCCAAAAAGAAGTATA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5950843 92 + 8656713 GAATTCACACTAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGAAAGGAATAGAACTGCAGGTGCAAGTAGAAGTCAGTGTCCAAAAAGAAGTGTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129381557 89 - 190850796 AAATTCTTACTAAGAAGAT-------CAGAAAGTATAGTGGAAAAGAGAGAAATAGAGCTGGAGATTCAAGTATAAGTCAGTCTTCAAA---AAGTGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465362 92 - 25294431 AAATTCATACTAAGAAGAT-------CAGAATGTGTACTGGAAAAGAGAGAAATAGAACTGGAGATGCATGCATAAGTCAGTCTTCAAAAAGAAGTATA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021154 92 - 6311556 AAATTCATACTAAGAAGAT-------CAGAAAGTGTAGTGGAAAAGAGAGAAATAGAACTGGAGATGCAAGTATAAGTCAGTCTTCAAAAAGAAGTGTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874202 92 + 15034901 AAATTCATACTAAGAAGAT-------CAGAAAGTGTGGTGGAAAAGAGAGAAATAGAACTGAAGATGCAAGTATAAGTCAGTCTTCAAAAAGAAGTGTA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 896783 92 - 3201129 GAATTCATAGTAAGTAGGT-------CACAAAGTACAATGGGGAACGTGAAAACAGACCGGGAGATGCCAACAGAAGGCTGTGTCCCAAAAGAAATATA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43991143 92 - 53741614 gagtccatatcaagcagcttccagggcagaaagta-aggagagaagaaaggagcaaaactggaagagcaagcagGGGTC------CGGAAGGAAGAATA i canFam3.chr19 I 3 C 0 e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=15561.000000 s hg38.chr9_KI270719v1_random 133 1 + 176845 T s panTro5.chr4 135027317 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8004 1 - 70559 T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421222 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131358741 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130877499 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34868821 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4422474 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78950209 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2714818 1 - 3013352 T i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5950935 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s rhiRox1.KN298694v1 860915 1 - 935421 T i rhiRox1.KN298694v1 N 0 I 381 s rhiBie1.NW_016806351v1 1170990 1 - 1973658 T i rhiBie1.NW_016806351v1 N 0 I 66546 s calJac3.chr3 129381646 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465454 1 - 25294431 T i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021246 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874294 1 + 15034901 T i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 896875 1 - 3201129 T i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43991235 1 - 53741614 T i canFam3.chr19 C 0 C 0 e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=236127.000000 s hg38.chr9_KI270719v1_random 134 25 + 176845 TTGTATTGTTCATTTGACCTCATTT s panTro5.chr4 135027318 20 + 194502333 TTGT-----TCATTTGACCTCATTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8005 25 - 70559 TTGTATTGTTCATTTGACCTCATTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421223 25 - 115148730 TTGTATTGTTCATTTGACCTCATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131358742 25 + 190429646 TTGTATTGTTCATTTGACCTCATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130877500 25 + 189454096 TTGTATTGTTCATTTGACCTCATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34868822 25 - 40319822 TTGTATTGTTCATTTGACCTCATTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4422475 25 - 9219162 TTGTATTGTTCATTTGACCTCATTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78950210 25 + 135778131 TTCTATTGTTCATTTGACCTTATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2714819 25 - 3013352 TTGTATTGTTCATTTGACCTCATTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5950936 25 + 8656713 TTGTATTGTTCATTTGACCTCATTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129381647 25 - 190850796 TTTTATTGTTTGTTTGACTTCATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465455 25 - 25294431 TTTTACTGTTCATTTGACCTCATTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021247 25 - 6311556 TTTTATTGTTCATTTGACCTCATTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874295 25 + 15034901 TTTTATTGTTCATTTGATCTCATTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 896876 25 - 3201129 TTGTAACATCCTTTGCGCCTCACTT i otoGar3.GL873702 C 0 I 284 s canFam3.chr19 43991236 25 - 53741614 ATGTGTAATTCATTTGGCATCATTT i canFam3.chr19 C 0 C 0 e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 860916 381 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=147038.000000 s hg38.chr9_KI270719v1_random 159 17 + 176845 ATTTTAGTATGCAAGCG s panTro5.chr4 135027338 17 + 194502333 ATTTTAGTATGCAAGCG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8030 17 - 70559 ATTTTAGTATGCAAGCG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421248 17 - 115148730 ATTTTAGTATGCAAGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131358767 17 + 190429646 ATTTTAGTATGCAAGCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130877525 17 + 189454096 ATTTTAGTATGCAAGCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34868847 17 - 40319822 ATTTTAGTATGCAAGCG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4422500 17 - 9219162 ATTTTAGTATGCAAGCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78950235 17 + 135778131 ATTTTAGTATGCAAGCG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2714844 17 - 3013352 ATTTTAGTATGCAAGCG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5950961 17 + 8656713 ATTTTACTATGCAAGTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129381672 17 - 190850796 GTTTTAGCAAGCAAGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465480 17 - 25294431 GTTTTAGCATGCAAGTG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021272 17 - 6311556 GTTTTAGCATGCAAGTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874320 17 + 15034901 GTTTTAGCATGCAAGTG i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 43991261 17 - 53741614 GCTTTAGTGTATTAGCT i canFam3.chr19 C 0 C 0 e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 860916 381 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e otoGar3.GL873702 896901 284 - 3201129 I a score=532524.000000 s hg38.chr9_KI270719v1_random 176 63 + 176845 TGTGCTTAAAAATATTTCAGCCTTCTTTTTACTATATATGCAACTCATCATCATTTATTGAGA------------------------------- s panTro5.chr4 135027355 63 + 194502333 TATGCTTAAAAATATTTCAGCCTTCTTTTTACTATATATGCAATTAGTCATTATTTATTGAGA------------------------------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8047 62 - 70559 TATGCTTAAAAATATTTCAGCCTTCTTTTTACTATATATGCAATTCGTCATTA-TTATTGAGA------------------------------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421265 63 - 115148730 TATGCTTAAAAATATTTCAGCCTTCTTTTTACTATATATGCAATTAGTCATTATTTATTCAGA------------------------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131358784 62 + 190429646 TATGCTTAAAAATATTTCA-TCTTCTTGTTACTATAAATGCAATTAGTCATTATTTATTGAAA------------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130877542 62 + 189454096 TATGCTTAAAAATATTTCA-TCTTCTTGTTACTATAAATGCAATTAGTCATTATTTATTGAAA------------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34868864 62 - 40319822 TATGCTTAAAAATATTTCA-CCTTCTTGTTACTATAAATGCAATTAGTCATTATTTATTGAAA------------------------------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4422517 62 - 9219162 TATGCTTAAAAATATTTCA-CCTTCTTGTTACTATAAATGCAATTAGTCATTATTTATTGAAA------------------------------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78950252 62 + 135778131 TATGCTTAAAAATATTTCA-CCTTCTTGTTACTATAAATGCAATTAGTCATTATTTATTGAAA------------------------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2714861 62 - 3013352 TATGTTTAAAAATATTTCA-CCTTCTTGTTACTATAAATGCAATTAGTCATTATTTATTGAAA------------------------------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5950978 62 + 8656713 TATGCTTACAAATATTTCA-TCTTCTTGTTACTATAAATGCAATTAGTCATTATTTATTGAAA------------------------------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129381689 63 - 190850796 TATGCTTAAAAATATGTCAGCCTTTTTGTTACTATATATGCAATTTGTCATTATTTATTGAGA------------------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465497 63 - 25294431 TATGCTTAAAAATATGTCAGCCTTTTTGTGACTATATATGCAATTCGTCATTATTTATTGAGA------------------------------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021289 63 - 6311556 TATGCTTAAAAATATGTCAGCCTTTTTGTTACTATATATGCAATTCGTCATTATTTATTGAGA------------------------------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874337 63 + 15034901 TATGCTTAAAAATATATCAGCTTTTTTGTTACTATATATGCAATTTGTCATTATTTATTGAGA------------------------------- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 897185 62 - 3201129 TATGTTGAAGAATATGTTGGTCTTTTTACTGCTATAGAC----TGAGTCATTATTTATTGAAA----------------------------AGT i otoGar3.GL873702 I 284 C 0 s canFam3.chr19 43991278 91 - 53741614 TACATTTAAGAATATTTTAGTCTT-TTGCTTCTACATAT--atttattgagaatttattgagaattaattgTGTATATATTATTATTGAGAATT i canFam3.chr19 C 0 C 0 e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 860916 381 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=1382891.000000 s hg38.chr9_KI270719v1_random 239 147 + 176845 GATTATATATCCA-TCA-TTACTTCaatgatctcatttttagctttcttcttct--ttattaatggatgc-----------------------------------------------------------------------------agtaacttctggcattcccctgagaatattaattctacttatttggaagtactctttttattgctctctgctgtcttTCTT s panTro5.chr4 135027418 147 + 194502333 GATTATATATCCA-TCA-TTACTTCaatgatctcatttttagctttcctcttct--ttattaatggatgc-----------------------------------------------------------------------------agtaacttctggcattcccctgagaatattaattctacttatttggaagtactctttttattgctctctgctgtcttTCTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8109 147 - 70559 GATTATATATCCA-TCA-TTACTTCaatgatctcatttttagctttcctcttct--ttattaatggatgc-----------------------------------------------------------------------------agtaacttctggcattcccctgagaatattaattctacttatttggaagtactctttttattgctctctgctgtcttTCTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421328 147 - 115148730 GATTATATATCCA-TCA-TTACTTCaatgatctcatttatagctttcctcttct--ttattaatggatgc-----------------------------------------------------------------------------agtaatttctggcattcccctgagaatattaattctgcttatttggaagtcctcttttcatttctctctgctgtcttTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131358846 147 + 190429646 GATTATATATCCA-TCA-TTACTACAATGATCTCATTTTTAGCTTTcctcttct--tttttaacggatgc-----------------------------------------------------------------------------agtaacttctggcattcccctgagaatattaattctacttatttggaagtcctcttttTATTGCTCTCTACTGTCTTTCtt i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130877604 147 + 189454096 GATTATATATCCA-TCA-TTACTACaatgatctcatttttagctttcctcttct--tttttaacggatgc-----------------------------------------------------------------------------agtaacttctggcattcccctgagaatattaattctacttatttggaagtcctctttttattgctctctactgtctttctt i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34868926 147 - 40319822 GATTATATATCCA-TCA-TTACTACAACGATCTCATTTTTAGCTTTCCTCTTCT--TTTTTAACAGAAGC-----------------------------------------------------------------------------AGTAACTTCTGGCATTCCCCTGAGAATATTAATTCTACTTATTTGGAAGTCCTCTTTTTATTGCTCTCTACTGTCTTTCtt i macNem1.NW_012010911v1 C 0 I 1 s cerAty1.NW_012000798v1 4422579 147 - 9219162 GATTAGATATCCA-TCA-TTACTACAATGATCTCATTTTTAGCTTTcctcttct--tttttaatggatgc-----------------------------------------------------------------------------agtaacttctggcattcccctgagaatattaattctacttatttggaagtcctcttttTATTGCTCTCTACTGTCTTTCtt i cerAty1.NW_012000798v1 C 0 I 1 s chlSab2.chr7 78950314 147 + 135778131 GATTATATATCCA-TCA-TTACTACaatgatcttatttttagctttcctcttct--tttttaatggatgc-----------------------------------------------------------------------------agtaacttctggcattcccctgagaatattaattctacttatttggaagtcttctttttgttgctctctactgtctttttt i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012103277v1 2714923 147 - 3013352 GATTATATATCCG-TCA-TTACTACAATGATCTCATTTTTAGCTTTcctcttct--tttttaatggatgc-----------------------------------------------------------------------------agtaagttctggcattcccctgagaatattaattctacttatttggaagttctcttttTATTGCTCTCTACTGTCTTTCTT i manLeu1.NW_012103277v1 C 0 I 1 s colAng1.NW_012114544v1 5951040 147 + 8656713 GATTATAAATCCA-TCA-TTACTACAATGATCTCATTTTTAGCTTTCTTCTTGT--TTTTTAAAGAATGC-----------------------------------------------------------------------------AGTAACTTCTGGCATTCCCCTGAGAATATTAATTCTACTTATTTGGAAGTCCTCTTTTTATTGCTCTCTACTGTCTTTCtt i colAng1.NW_012114544v1 C 0 I 1 s calJac3.chr3 129381752 148 - 190850796 GATGATATATACA-TCA-TAAtttaaatgatctcatttttagttttcctgtttta-tttttagtggatgc-----------------------------------------------------------------------------agtaaattctgctattgccctgaaaatattaatttcacttatttggaagacctcttcttattgctttctactgtcttttgt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465560 143 - 25294431 GATGATATATACA-TCA-TAACTtaaatgatctaatttttagttttcctctttta-tttttaatggatgc-----------------------------------------------------------------------------agtaaattctgctattgccctgagaatattaattctacttatttggaagac-----tttattgctctctactgtctttcgt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021352 148 - 6311556 GATGATATATACA-TCA-TAATTTAAATGATCGCATTTTTAGTTTTCCTCTTTTA-TTTTTAATGGATGC-----------------------------------------------------------------------------AGTAAATTCTGCTATTGCCCTGAGAATATTAATTCTACTTATTTGGAGGAACTCTTCTTATTGCTCTCTACTGTCTTTTGT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874400 224 + 15034901 GATGATATATACA-TCA-TAATTT-AATAATCTCATTTTTAATTTTCCTCTTTTA-TTTTTAATGGATATTCTGGATATTTAATGGATATTCCTCTTTTATTTTTAATTGATATTTTTAATTGATTTTATTTTTAATGGATATTCTAAGTAAATTCTGCTATTGCCCTGAGAATATTAATTCTACTTATTTGGAAGACCTCTTCTTATTGCTCTCTGCTGTCTTTCGT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 897247 150 - 3201129 GATGATGTATATA-TTGTTTAGTTCAATGATCTCATTTTGGACTTTCCTCTTTTATTTTTCTGTGGATGC-----------------------------------------------------------------------------AATAACTTTGTGTGTGTTTCTTGGGATATTAATTACACCCGTTTTGAAGGCCTTGTCTTGTTGCTGTTTATTGTCTTTCTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43991369 149 - 53741614 AATTGTGTATATA-TTATTTATTTCAGTGAGCcctttttaagcttccctcttttatttttctatgga-ac-----------------------------------------------------------------------------aacaacttcttgcatccctctgaggatattaattatactcatttggaaatattttTCTTATTGATCCATACCGTCCTTCCT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1665091 124 + 5974691 GATCATATATGTATTCA-TTTTATTGATGATCCCATTTC-AGGTTTCTTGTTAT--TTTCCTATGGATGC------------------------------------------------------------------------------------------ATCCGTCTGAGGAAATTAATTATACTGATTTGGAAGCCCTCCCCTTATT----------GTCCTTCCT i dasNov3.JH569232 N 0 C 0 e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 860916 381 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=5536.000000 s hg38.chr9_KI270719v1_random 386 1 + 176845 T s panTro5.chr4 135027565 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8256 1 - 70559 T i gorGor5.CYUI01001450v1 C 0 C 0 s ponAbe2.chr9 20402266 1 + 135191526 c i ponAbe2.chr9 N 0 I 17472 s nomLeu3.chr7b 90421475 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131358994 1 + 190429646 t i rheMac8.chr5 I 1 C 0 s macFas5.chr5 130877752 1 + 189454096 t i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34869074 1 - 40319822 t i macNem1.NW_012010911v1 I 1 C 0 s cerAty1.NW_012000798v1 4422727 1 - 9219162 t i cerAty1.NW_012000798v1 I 1 C 0 s chlSab2.chr7 78950462 1 + 135778131 t i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012103277v1 2715071 1 - 3013352 T i manLeu1.NW_012103277v1 I 1 C 0 s nasLar1.chr5 118942634 1 + 174288623 c i nasLar1.chr5 N 0 I 128 s colAng1.NW_012114544v1 5951188 1 + 8656713 t i colAng1.NW_012114544v1 I 1 C 0 s calJac3.chr3 129381900 1 - 190850796 c i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6465703 1 - 25294431 c i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4021500 1 - 6311556 C i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14874624 1 + 15034901 C i aotNan1.NW_018507635v1 C 0 I 1 s otoGar3.GL873702 897397 1 - 3201129 C i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43991518 1 - 53741614 C i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1665215 1 + 5974691 C i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 860916 381 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=959691.000000 s hg38.chr9_KI270719v1_random 387 126 + 176845 -TGTATTTTATACATCTTTCAT---TTG--------CTTTATGTTATTTTAAATC-TTACCCTATGCACTT-ACAATGATGGCACTTCT-------CTGAATGACTGTTGATtttc-ttcctttct--ttctttttttcATGTTGTCTAC s panTro5.chr4 135027566 126 + 194502333 -TGTATTTTATGCATCTTTCAT---TTG--------CTTCATGTTATTTTAAATC-TTACCCTATGCACTT-ACAATGATGGCACTTCT-------CTGAATGACTGTTGATtttc-ttcctttct--ttctttttttcATGTTGTCTAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8257 124 - 70559 -TGTATTTTATACATCTTTCAT---TTG--------CTTTATGTTATTTTAAATC-TTACC--ATGCACTT-ACAGTGATGGCACTTCT-------CCGAATGACTGTTGATtttc-ttcctttct--ttctttttttcATGTTGTCTAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421476 126 - 115148730 -TGTATTTTATACATCTTTCAT---TTG--------CTTTATGTTATTTTAAATC-TTACCCTATGCACTT-ACAATGATGGCACTTGT-------CTGAATGACTGTTGATtttc-ttcctttct--ttctttttttcACGTTGTCTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131358995 110 + 190429646 -tgtattttatagatctttcat---ttg--------ttttatgttattttaAATC-TTACCCTATGCA-----------------TTCT-------CTGAATGATTGCTGAttttc-ttcctttct--ttatttttttcactttgtctac i rheMac8.chr5 C 0 I 6 s macFas5.chr5 130877753 110 + 189454096 -tgtattttatagatctttcat---ttg--------ttttATGTTATTTTAAATC-TTACCCTATGCA-----------------TTCT-------CTGAATGATTGCTGATtttc-ttcctttct--ttatttttttcactttgtctac i macFas5.chr5 C 0 I 2 s macNem1.NW_012010911v1 34869075 110 - 40319822 -tgtattttatagatctttcat---ttg--------ttttatgttattttaAATC-TTACCCTATGCA-----------------TTCT-------CTGAATGATTGCTGATTTTC-TTCCTTTCT--TTATTTTTTTCACTTTGTCTAC i macNem1.NW_012010911v1 C 0 I 2 s cerAty1.NW_012000798v1 4422728 126 - 9219162 -tgtattttatagatctttcat---ttg--------ttttatgttattttaAATC-TTACTCTATGCACTT-ATAATGATGGCACTTTT-------CTGAATGATTGCTGActttc-ttcctttct--ttatttttttcactttgtctac i cerAty1.NW_012000798v1 C 0 I 4 s chlSab2.chr7 78950463 127 + 135778131 -tgtattttatagatacttcat---ttg--------ttttatgttattttaAATC-TTACCCTATGCACTT-ACAATGATGGCACTTCT-------CTGAATGATTGCTGATtttctttcctttct--ttatttttttcactttgtctac i chlSab2.chr7 C 0 I 6 s manLeu1.NW_012103277v1 2715072 126 - 3013352 -TGTATTTTATAGATCTTTCAT---TTG--------TTTTATGTTACTTTAAATC-TTACCCTATGCACTT-ACAATGATGGCACTTCT-------CTGAATGATTGCTGATTTTC-TTCCTTTCT--TTATTTTTTTCACTTTGTCTAC i manLeu1.NW_012103277v1 C 0 I 2 s colAng1.NW_012114544v1 5951189 126 + 8656713 -tgtattttataggtatttcat---ttg--------ttttatgttattttaAATC-TTACCCTATGCACTT-ACAATGATGGCACTTCT-------CTGAATGATTGCTGATtttc-ttcctttct--ttctttttttcACTTTGTCTAC i colAng1.NW_012114544v1 C 0 I 2 s calJac3.chr3 129381902 126 - 190850796 -gatattttacagatcttccat---ttg--------ttttatcttactttaaatc-ttaccttttttgcttaacaatgatgatgctttt-------ctgaatgattgttgattttC-TTCCTTTCC--TT-CTTTTTTCACTTTTTCTAT i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6465705 128 - 25294431 -gatattttgtagatcttccat---ttg--------ttttATGTTACTTTAAATC-TTACCCTCTTTGCTTAACAGTGATGACACTTTT-------CTGAATGATTGTTGATTTGC-TTCCTTTCCTTTT-TTTTTTTCACTTTGTCCAT i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4021502 126 - 6311556 -GATATTTTATAGGTCTTCCAT---TTG--------TTTTATCTTACTTTAAATC-TTACCCTCTTTGCTTAACAATGATTACACTTTT-------CTGAATGTGTGTTGAttttc-ttcctttcc--tt-cttttttcactttgtctgt i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14874626 126 + 15034901 -GATATTTTATAGATCTTCCAT---TTG--------TTTTATCTTACTTTAAATC-TTACCCTCTTTGCTTAACAATGATGACACTTTT-------CTGAATGATTGTCGATTTTC-TTCCTTTCC--TT-CTTTTTTCACTTTGTCTGT i aotNan1.NW_018507635v1 I 1 C 0 s otoGar3.GL873702 897398 77 - 3201129 ----------TAAATCCTCCATTTGTTG--------TTTTATTTCAATTTAAATC-TTGGCCTCTATGCTT-AGAATGCTGACACTTCT-------CTGAATAA---------------------------------------------- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43991520 136 - 53741614 -GCTATGGTATAGATCCTCCAT---TTGTTTATTTATTTTATTTTATTCTAAACCTTTGTCCTCTATACTT-GTAATGGTGCCATTTCTCATTTCCCTAAATGACTTTTAATCTTT-TTTCTTTTT--T--CCTTTCTGACTTTGC---- i canFam3.chr19 I 1 I 2 s dasNov3.JH569232 1665216 116 + 5974691 TGCTATTATAAGGGTCCCTCAT---TTG----TTTATTTCATTTTATTTAAGATC-TTTTTCTCTGTACCT-ATAATGCTGGCATTTCT--------TAAATGATTATTGATTCTT-TTTTTGGCC--TTAGCATT-------------- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118942635 128 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 860916 381 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=-22649.000000 s hg38.chr9_KI270719v1_random 513 2 + 176845 -AT s panTro5.chr4 135027692 2 + 194502333 -AT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8381 2 - 70559 -AT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421602 1 - 115148730 -A- i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 78950596 1 + 135778131 --t i chlSab2.chr7 I 6 I 1 s manLeu1.NW_012103277v1 2715200 1 - 3013352 --T i manLeu1.NW_012103277v1 I 2 I 1 s colAng1.NW_012114544v1 5951317 1 + 8656713 --A i colAng1.NW_012114544v1 I 2 I 1 s calJac3.chr3 129382028 1 - 190850796 -A- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465833 1 - 25294431 -A- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021628 1 - 6311556 -a- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874752 1 + 15034901 -A- i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1665332 2 + 5974691 CA- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118942635 128 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 860916 381 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43991656 2 - 53741614 I e otoGar3.GL873702 897475 0 - 3201129 C e cerAty1.NW_012000798v1 4422854 4 - 9219162 I e macNem1.NW_012010911v1 34869185 2 - 40319822 I e macFas5.chr5 130877863 2 + 189454096 I e rheMac8.chr5 131359105 6 + 190429646 I a score=10920.000000 s hg38.chr9_KI270719v1_random 515 1 + 176845 T s panTro5.chr4 135027694 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8383 1 - 70559 T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421603 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131359111 1 + 190429646 t i rheMac8.chr5 I 6 C 0 s macFas5.chr5 130877865 1 + 189454096 t i macFas5.chr5 I 2 C 0 s macNem1.NW_012010911v1 34869187 1 - 40319822 T i macNem1.NW_012010911v1 I 2 C 0 s cerAty1.NW_012000798v1 4422858 1 - 9219162 t i cerAty1.NW_012000798v1 I 4 C 0 s chlSab2.chr7 78950598 1 + 135778131 t i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012103277v1 2715202 1 - 3013352 T i manLeu1.NW_012103277v1 I 1 C 0 s nasLar1.chr5 118942763 1 + 174288623 t i nasLar1.chr5 I 128 I 2564 s colAng1.NW_012114544v1 5951319 1 + 8656713 T i colAng1.NW_012114544v1 I 1 C 0 s rhiRox1.KN298694v1 861297 1 - 935421 t i rhiRox1.KN298694v1 I 381 I 1 s calJac3.chr3 129382029 1 - 190850796 T i calJac3.chr3 C 0 C 0 s canFam3.chr19 43991658 1 - 53741614 T i canFam3.chr19 I 2 I 2 s dasNov3.JH569232 1665334 1 + 5974691 T i dasNov3.JH569232 C 0 C 0 e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e otoGar3.GL873702 897475 0 - 3201129 C e aotNan1.NW_018507635v1 14874753 0 + 15034901 C e cebCap1.NW_016107420v1 4021629 0 - 6311556 C e saiBol1.JH378129 6465834 0 - 25294431 C a score=78062.000000 s hg38.chr9_KI270719v1_random 516 8 + 176845 TTTTTTTC s panTro5.chr4 135027695 8 + 194502333 TTTTTTTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8384 8 - 70559 TTTTTTTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421604 8 - 115148730 TTTTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131359112 8 + 190429646 tttttttc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130877866 8 + 189454096 tttttttc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34869188 8 - 40319822 TTTTTTTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4422859 8 - 9219162 ttttttcC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78950599 8 + 135778131 ttttttcC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2715203 8 - 3013352 TTTTTTCC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5951320 8 + 8656713 TTGTTTTT i colAng1.NW_012114544v1 C 0 I 1 s rhiRox1.KN298694v1 861299 8 - 935421 tttttttt i rhiRox1.KN298694v1 I 1 I 2005 s calJac3.chr3 129382030 8 - 190850796 TTTTTTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465834 8 - 25294431 CTTTTTGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021629 8 - 6311556 cttttttc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874753 8 + 15034901 CTTTTTTC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 897475 4 - 3201129 ----TTTC i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 43991661 6 - 53741614 CTTTTT-- i canFam3.chr19 I 2 I 2 s dasNov3.JH569232 1665335 8 + 5974691 CTTTTTTA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=2210019.000000 s hg38.chr9_KI270719v1_random 524 235 + 176845 AAGGTGAGTTTCTGCTAGAC----TG-----TTATTACTGAGCAATC-CTTTGGTAGAGAAGGA-GGTTC-ATGCTGCTACAGGCCACAATTTGCCTCATTTGCAGTCAGATCAGGCTTTTT----------------GTCAGAGA-----GAGG-ACATGCCCATTAGGC-AATATGTATTC-AGA-TATTTCCAACTGATCGCTGCCTTTTCT-TTCTGATTCAAATTCCCATTCTCAATATATTTACCTAATGTATGCCTCCCTTTTGCC s panTro5.chr4 135027703 235 + 194502333 AAGGTGAGTTTCTGCTAGAC----TG-----TTATTACTGAGCAATC-CTTTGGTGGAGAAGGA-GGTTC-ATGCTGCTACCGGCCACAATTTGCCTCATTTGCAGTCAGATCAGGCTTTTT----------------GTCAGAGA-----GAGG-ACATGCCCATTAGGC-AATATGTATTC-AGA-TATTTCCAACTGATCACTGCCCTTTCT-TTCTGATTCAAATTCCCTTTCTCAATATATTTACCTAATGTATGACTCCCTTTTGCC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8392 234 - 70559 AAGGTGAGTTTCTGCTAGAC----TG-----TTATTACTGAGCAAT--CTTTGGTGGAGAAGGA-GGTTC-ATGCTGCTACAGGCCACAATTTGCCTCATTTGCAGTCAGATCAGGCTTTTT----------------GTCAGAGA-----GAGG-ACATGCCCATTAGGC-AATATGTATTC-AGA-TATTTCCAACTGATCGCTGCCTTTTCT-TTCTGATTCAAATTCCCATTCTCAATATATTTACCTAATGTATGCCTCCCTTTTGCC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421612 231 - 115148730 AAGGTGAGTTTCTGCTAGAC----AG-----TTATTACTGAGCAATC-CTTTGGTGGAGAAGGA-GGTTC-ATTTTGCTCTCGGCCACAATTTGCCTCATTTGCAGTCAGATCAGGCTTGTT----------------GTCAGAGA-----GAGG-ACATGCCCATTAGGC-AATATGTATTC-AGA-TATTTCCAACTGATCACCGCCCTTTCT-TTCTCATTCAAATTCCCATTCTCAATATATTTACCTA----ATGACTCCCTTTTGCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131359120 234 + 190429646 tAGGTGTGTTTCTGCTAGAC----TG-----TTATTACTGAGCAATC-CTTTGATGGAGAAGGA-AGTTC-ATGCTGCTACCA-CCACAATTTGCCTCATTTGCAGTCAGAGCAGGCTTTTT----------------GTCAGAGA-----GAGG-GCATGCCCATTAGGC-AATATGTATTC-AGA-TATTTCCAACTGATCACTGCCCTTTCC-TTCTGATTCAAGTTCCCGTTCTCAATATATTTACCTAATGTATGACTCTCTTTTGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130877874 234 + 189454096 tAGGTGTGTTTCTGCTAGAC----TG-----TTATTACTGAGCAATC-CTTTGATGGAGAAGGA-AGTTC-ATGCTGCTACCA-CCACAATTTGCCTCATTTGCAGTCAGAGCAGGCTTTTT----------------GTCAGAGA-----GAGG-GCATGCCCATTAGGC-AATATGTATTC-AGA-TATTTCCAACTGATCACTGCCCTTTCC-TTCTGATTCAAGTTCCCGTTCTCAATATATTTACCTAATGTATGACTCTCTTTTGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34869196 234 - 40319822 TAGGTGTGTTTCTGCTAGAC----TG-----TTATTACTGAGCAATC-CTTTGATGGAGAAGGA-AGTTC-ATGCTGCTACCA-CCACAATTTGCCTCATTTGCAGTCAGAGCAGGCTTTTT----------------GTCAGAGA-----GAGG-GCATGCCCATTAGGC-AATATGTATTC-AGA-TATTTCCAACTGATCACTGCCCTTTCC-TTCTGATTCAAGTTCCAGTTCTCAATATATCTACCTAATGTATGACTCTCTTTTGCC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4422867 235 - 9219162 AAGGTGTGTTTCTGCTAGAC----TG-----TTATTACTGAGCAATC-CTTTGATGGAGAAGGA-AGTTC-ATGCTGCTACCA-CCACAATTTGCCTCATTTGCAGTCAGAGCAGGCTTTTT----------------GTCAGAGA-----GAGG-GCATGCCCATTAGGC-AATATGTATTC-AGATTATTTCCAACTGATCACTGCCCTTTCC-TTCTGATTCAAGTTCCCGTTCTCAATATATTTACCTAATGTATGACTCTCTTTTGCC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78950607 234 + 135778131 AAGGTGTGTTTCTGCTAGAC----TG-----TTATTACTGAGCAATC-CTTCAATGGAGAAGGA-AGTTC-ATGCTGCTACCA-CCACAATTTGCCTCATTTGCAGTCAGAGCAGGCTTTTT----------------GTCAGAGA-----GAGG-GCATGCCCATTAGGC-AATATGTATTC-ATA-TATTTCCAACTGATCACTGCCCTTTCC-TTCTGATTCAAGTTCCCGTTCTCAATATATTTACCTAATGTATGACTCTCTTTTGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2715211 235 - 3013352 AAGGTGTGTTTCTGCTAGAC----TG-----TTATAACTGAGCAATC-CTTTGATGGAGAAGGA-AGTTC-ATGCTGCTACCA-CCACAATTTGCCTCATTTGCAGTCCGAGCAGGCTTTTT----------------GTCAGAGA-----GAGG-GCATGCCCATTAGGC-AATATGTATTC-AGATTATTTCCAACTGATCACTGCCCTTTCC-TTCTGATTCAAGTTCCCGTTCTCAATATATTTACCTAATGTATGACTTTCTTTTGCC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5951329 236 + 8656713 AAGGTGTGTTTCTGCTAGAC----CG-----TTATTACTGAGCAATC-CTTTGATGGAGAAGGA-AGTTC-ATGCTACTACCAGCCACAATTTGCCTCATTTGCAGTCAGAGCAATCTTTTT----------------GTCAGAGA-----GAGG-GCATGCCCATTAGGCAAATACGTATTC-AGA-TATTTCCAACTGATCACTGCCCTTTCC-TTCTGATTCAAGTTCCCGTTCTCAATATATTTACCTAATGTATGACTCCCTTTTGCC i colAng1.NW_012114544v1 I 1 C 0 s calJac3.chr3 129382038 232 - 190850796 AAGGTGAGTTTCTGCTAGAC----TG-----TTATTACTGAGCAGTC-CTTTAGTGGAGAAGAA-ACTTC-ATGCTGCTATGGCCCAAAATTTGCCACATTTGCAAACAGAGCATTATTTTG----------------GTCAGAGA-----GAGG-ACATGGCCATTAGGC-GATATGTATTC-ACA-TATTTCCAACTGATCACTGCCCTTTCT----GATTTCAAGTTCCCGTTCTCAATATATTTACCTAATGTATGACTCCTTTTTGCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6465842 235 - 25294431 AAGGTGAATTTCTGCTAGAC----TG-----TTATTACTGAGCAGTC-CTTTAGTGGAAAAGAA-ATTTC-ATGCTGCTATGTCCCAAAATCTGCCTCATTTGCAAACAGAGCATTATTTTG----------------GTCAGAGA-----GAGG-ACATGGCCATTAGAC-AATATGTATTC-ACA-TATTTCCAACTGATCACTGCCCTTTCT-TTCTGATTCAAGTTCCCATTCTCAATATATTTACTGAATATATGACTCCTTTTTGCC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021637 235 - 6311556 AAGGTGAGTTTCTGCTAGAC----TG-----TTATTACTGAGCAGTC-CTTTAGTGGAGAAGAA-ATTTC-ATGCTGCTATGGCCCAAAATTTGCCTCATTTGCAAACAGAGCATTATTTTG----------------GTCAGAGA-----GAGG-ACATGGCCATTAGGC-AATATGTATTC-ACA-TATTTCCAACTGATCACTGCCCTTTCT-TTCTGATTCAAGTTCCCATTCTCAATATATTTACCTAATGTATGACTCCTTTTTGCC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874761 235 + 15034901 AAGGTGAGTTTCTGCTAGAC----TG-----TTATTACTGAGCAGTC-CTTCAGTGGAGAAGAA-ATTTC-ATGCTGCTATGGCCCAAAATTTGCCTCATTTGCAAACAGAGCATTATTTTG----------------GTCAGAGA-----GAAG-ACATAGCCATTAGGC-AATATGTATTC-ACA-TATTTCCAACTGATCACTGCCCTTTCT-TTCTGATTCAAGTTCCCATTCTCAACATATTTACCTAATGTATGACTCCTTTTTGCC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 897480 237 - 3201129 AAGGTGAACTTCTGCGAGCC----TG-----TT-TTAGTGAGCCGTCTCTTTGGTGGAAAAGGA-AGGTCTGTACTGCTATAGCTGACAGTTTGCCCCATTTGCAGTCAGGACA-TCATTTC----------------ATCAGGGAAAGAGGAGG-ACAAGCCCACTTGGC-AATGTGTATTG-AGG-TGTTTCCAACTGACCACTACCATTTCTTTTCTGATATAAATTC---TACTCAA-ATAACCACTTAATATAAGACTCTCTTCTGCC i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 43991669 240 - 53741614 AACAGGAGTCTCTGCTATACTCCTTG-----TTTTTATTGAGCA--C-CCTGCATGGTGGAGGATAGTTT-TCCCTGTTACTG----------------TTTGCAGTCAGAACttttttttttttttttttttttttGGTCAGGAA---TGGAAA-ACATACCCATTAGGT-GGTGTTCATTC-ACA-ATTTGCCAGCTGATCACTGTCCTTTCT-TTCCTACCCTCGCCCTCACACTCACTGCACCTAGTTAAGATATGActctttcttgct i canFam3.chr19 I 2 I 234 s dasNov3.JH569232 1665343 191 + 5974691 AAAGTGATTTTCTGCAAGAC----TGCCTGTTTTTTTCTGAGCCATT-C--------------A-----C---------------------TTGCCCCATTTGTAGTCAGAACA--CTTGTT----------------GACAGGGA-----GGGACACATG-TCACCA--C-TACTTGTCTTCTAGG-TATTGCCAGCTGAAAACTGTCCTTT---TTCTGACCCACATCC----TCACAATACATCCTCAGGAGATATGACTCTCT--TGCC i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=4101766.000000 s hg38.chr9_KI270719v1_random 759 496 + 176845 TTTTTAAGCAAGACTAAAAAATCAATACCCTTG-AAA-----AAAAT-TGATTAATTTGGCTAACTTAAATTTAAAGTCTTCACTTCTAGCAAAATAGTTTTACTACATGTTTT---------TTACTA-----TGAGAAAATATGTAAACTATGTATACCAA-----------AGCAAATGTATAAATAATTTAGAAAAATAAAAATATTTCAATAGAAAAGTG-GGAAAA-TGTAA-AAATAGGTACTTACTGGAAGAATCAAGAGATTAGTTCTAAAGACCTTAATTATTTATTTAAACTAATTTAATTAAAATTTTAAAAATAATT-AAATTTTTCAATAATCAAGTAAAACAAA-TTAAACTTAAACAATAGAACCTTTTATTTTGAGATGC-AAAAGCATGAATCAAAGACATCTGTAAAGCTTAAATGTATTCAGATTGTAAA-------------------GCTAACCCATGTAAACCAAACTAGGCCAGGAATTAGACTATA-TTAGTGCCCCAGACTCCCC-CAAGTGTcccttcctaaaagaag s panTro5.chr4 135027938 488 + 194502333 tttttaagcaagactcaaaaatcaatacccttg-aaa-----aaaat-tgattaatttggctagattaaatttaaagtcttcacttccagcaaaaTAGTTTTACTACATATTTT---------TTACT-------GAGACAATATGCAAACTATGTATACCAA-----------AGCAAATCTATAAATAATTTAGAAAAATAAAAATATATCAATAGAAAAGTG-GGAAAA-CGTAA-AAATAGGTGCTTACTGGAAGAATCAAGAGAGTAGTTCTAAAGACCTTAATTATTTATTTAAACTAATTTAATTAACATTTTAAAAATAATT-AAATTTTTCAATAATCAAGTAAAACAAA-TTAAAC------AATAGAACCTTTTATTTTGAGATGC-AAAAGCATGAATCAAAGACATCTGTAAAGCTTAAATGTATTCAGGTTGTAAA-------------------GCTAACCCATGTAAACCAAACTAGGCCACGAATTAGACTATA-TCAGCGCCCCAGACTCCCC-CAAGTGTcccttcctaaaagaag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 8626 493 - 70559 TTTTTAAGCAAGACTAAAAAATCAATACCCTTG-AAA-----AAAAT-TGATTAATTTGGCTAGCTTAAATTTAAAGTCTTCACTTCTAGCAAAATAGTTTTACTACATATTTT---------TTACT-------GAGAAAATATGTAAACTATGTATACCAA-----------AGCAAATCTATAAATAATTTAGAAAAATAAAAATATATCAATAGAAAAGTG-GGAAAA-TGTAA-AAATAGGTACTTACTGGAA-AATCAAGAGATTAGTTCTAAAGACCTTAATTATTTATTTAAACTAATTTAATTAAAATTTTAAAAATAATT-AAATTTTTCAATAATCAAGTAAAACAAA-TTAAACTTAAACAATAGAACCTTTTATTTTGAGACGC-AAAAGCATGAATCAAAGACATCTGTAAAGCTTAAATGTATTCAGGCTGTAAA-------------------GCTAACCCATGTAAACCAAACTAGGCCAGGAATTAGACTATA-TCAGCGCCCCAGACTCCCC-CAAGTGTcccttcctaaaagcag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90421843 491 - 115148730 TTTTTAAGCAAGACTCAAAAATCAATACCCTTGAAAA-----AAAAA-TCATTAATTTGGCTAGCTTAAATTTAAAGTCTTCTCTTCTAGCAAAATAGTTTTACTACGTATTTT---------TTACTA-----AGAGACAATATGTAAACTATGTATACCAA-----------AGCAAATCTATAAATAATTTAGAAAAATAAAAATATAACAATAGAAAAGAG-GGAAAA-TGTAT-AAATAGGTACTTACTGGAAGAATCAAGAGAGTAGTTCTAAAGACCttaattatttatttaaactaatttaattaaaattttgaaaataatt-aaatttttcaataatcaagtaaAACAAA-TTAAAC------AATAGAACCTTTTATTTTGAGATGC-AAAACCATGAATCAAAGACATTTGTAAAGCTTAAATGTATTCAGGCTGTAAA-------------------GCTAACCCATGTAAACCAAACTAGGCCAGGAATTAGACTATA-TCAGTGCCCCAGACTCCCC-CGAGTGTcccttcctaaaagaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131359354 497 + 190429646 tttttaagcatgactcaaaaatcaatacccttg-aaa-----aaaat-tgattaatttggctagcttaaatttaaagtcttctcttctagcaaaaTAGTTTTACTACATATTTT---------TTACAAACTG-AGAGACAATTTGTAAACTATGAATACCAA-----------AGAAAATCCATAAATAATTTAGAAAAATAAAAATATATCAATAGAAAAGTG-GGAAAA-TGTAT-AAACAGGTACTTACTGGAAGAATCAAGAGAGTAGTTCTAAACACCttaattttttatttaaactaatttaattaaaattTTAAAAATATTTAAAAATTGTCAATAATCGAGTAAAACAAACTTAAAC------AATGGAACCTTTTATTCTGTGATGC-AAAAGCATGAATCAAAGACATATGTAAAGCTTAAATTTATTCAGGTTGTAAA-------------------GCTAACCCATGTAAACCAGTCTAGGCCAGGAATTAGACTATT-TCAGCGTCGCAAACTTTTAGGAAGTGTcctttcctaaaagaag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130878108 497 + 189454096 tttttaagcatgactcaaaaatcaatacccttg-aaa-----aaaat-tgattaatttggctagcttaaatttaaagtcttctcttctagcaaaaTAGTTTTACTACATATTTT---------TTACAAACTG-AGAGACAATTTGTAAACTATGTATACCAA-----------AGAAAATCCATAAATAATTTAGAAAAATAAAAATATATCAATAGAAAAGTG-GGAAAA-TGTAT-AAACAGGTACTTACTGGAAGAATCAAGAGAGTAGTTCTAAACACCttaattttttatttaaactaatttaattaaaattTTAAAAATATTTAAAAATTGTCAATAATCGAGTAAAACAAACTTAAAC------AATGGAACCTTTTATTCTGAGATGC-AAAAGCATGAATCAAAGACATATGTAAAGCTTAAATTTATTCAGGttgtaaa-------------------gctaacccatgtaaaccagtctaggccaggaattagactatt-tcagcgtcgcaaacttttaggaagtgtcctttcctaaaagaag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34869430 497 - 40319822 tttttaagcatgactcaaaaatcaatacccttg-aaa-----aaaat-tgattaatttggctagcttaaatttaaagtcttctcttctagcaaaaTAGTTTTACTACATATTTT---------TTACAAACTG-AGAGACAATTTGTAAACTATGTATACCAA-----------AGAAAATCCATAAATAATTTAGAAAAATAAAAATATATCAATAGAAAAGTG-GGAAAA-TGTAT-AAACAGGTACTTACTGGAAGAATCAAGAGAGTAGTTCTAAACACCttaattttttatttaaactaatttaattaaaattTTAAAAATATTTAAAAATTGTCAATAATCGAGTAAAACAAACTTAAAC------AATGGAACCTTTTATTCTGAGATGC-AAAAGCATGAATCAAAGACATATGTAAAGCTTAAATTTATTCAGGTTGTAAA-------------------GCTAACCCATGTAAACCAGTCTAGGCCAGGAATCAGACTATT-TCAGCGTCCCAAACTTTTAGGAAGTGTcctttcctaaaagaag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4423102 497 - 9219162 tttttaagcatgactcaaaaatcaatacccttg-aaa-----aaaat-tgattaatttggctagcttaaatttaaagtcttctcttctagcaaaaTAGTTTTACTACATATTTT---------TTACAAACTG-AGAGACAATTTGTAAACTATGTCTACCAA-----------AGAAAATCCATAAATAATTTAGAAAAATAAAAATATATCAATAGAAAAGTG-GGAAAA-TGTAT-AAACAGGTACTTACTGGAAGAATCAAGAGAGTAGTTCTAAACACCttaattttttatttaaactaatttaattaaaattTTAAAAATAATTAAAAATTGTCAATAATCGAGTAAAACAAACTTAAAC------AATGGAACCTTTTATTTTGAGATGC-AAAAGCATGAATCAAAGACATATGTAAAGCTTAAATTTATTCAGGTTGTAAA-------------------GCTAACCCATGTAAATCAGTCTAGGCCAGGAATTAGACTATT-TCAGCATCCCAGACTTTTAGGAAGTGTcctttcctaaaagaag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78950841 497 + 135778131 TTTTCAAGCATGACTCAAAAATCAATACCCTTG-AAA-----AAAAT-TGATTAATTTGGTTAGCTTAAATTTAAAGTCTTCTCTTCTAGCAAAATAGTTTTACTACATATATT---------TTACAAACTG-AGAGACAATTTGTAAACTATGTATACCAA-----------AGAAAATCCATAAATAATTCAGAAAAATAAAAATATATCAATAGAAAAGTG-GGAAAA-TGTAT-AAACAGGTACTTACTGGAAGAATCAAGAGAGTAGTTCTAAACACCttaattttttatttaaactaatttaattaaaattTTAAAAATAATTAAAAATTGTCAATAATCAAGTAAAACAAACTTAAAC------AATGGAACCTTTTATTTTGAGATGC-AAAAGCATGAATCAAAGACATATGTAAAGCTTACATTTATTCAGGttgtaaa-------------------gctaacccatgtaaaccagtctaggccaggaattagactatt-tcagcgtcccaaacttttagggagtgtcccttcctaaaagaag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2715446 497 - 3013352 tttttaagcatgactcaaaaatcaatacccttg-aaa-----aaaat-tgattaatttggctagcttaaatttaaagtcttctcttctagcaaaaTAGTTTTACTACATATTTT---------TTACAAACTG-AGAGACAATTTGTAAACTATGTATACCAA-----------AGAAAATCCATAAATAATTTAGAAAAATAAAAATATATCAATAGAAAAGTG-GGAAAA-TGTAT-AAACAGGTACTTACTGGAAGAATCAAGAGAGTAGTTCTAAACACCttaattttttatttaaactaatttaattaaaattTTAAAAATAATTAAAAATTGTCAATAATCGAGTAAAACAAACTTAAAC------AATGGAACCTTTTATTTTGAGATGC-AAAAGCATGAATCAAAGACATATGTAAAGCTTAAATTTATTCAGGTTGTAAA-------------------GCTAACCCATGTAAACCAGTCTAGGCCAGGAATTAGACTATT-TCAGCGTCCCAAACTTTTAGGAAGTGTcctttcctaaaagaag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5951565 493 + 8656713 tttttaaacaagactcaaaaatcaatacccttgaaaa-----aaaat-tgattaatttggctagcttaaattttaagtcttctcttctagcaaaaTAGTTTTACTACATATTTT---------TTACTAACTG-AGAGACAATATCTAAACTATATATACCAA-----------AGAAAATCTATAAATAATTTAGAAAAATAAAAATATATCAATAGAAAAGTG-GGAAAA-TGTAT-AAACAGGTACTTACTGGGAGAATCAAAAGAGTAGTTATAAACACCTTAATTATTTATTTAAACTAATTTAATTAAAATTTTAAAAATAACTAAAAATTTTCAATAATCGAGTAAAACAA----AAAC------AATGGAACCTTTTATTTTGAGATGC-AAAAGCATGAATCAAAGACATATGTAAAGCTTAAATTTATTCAGGTTGTAAA-------------------GCTAACCCATGTAAACCAGTCTAGGCCAGGAATTAGACTATT-TCAGTGTCCCAAACTCCCC-TAAGTGTcccttgctaaaagaaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129382270 512 - 190850796 TTTAtaagcaagacacaaaaatcaatacccttg-ggg--aaaaaaaa-agattaatttggctaccttaaatttaaagtcttctctccaAGCAAACTAGTTTTACTACATTTTTT-------TCTTACTAACTA-GGAGACAATATGTAAACTATGT-----AA-----------TGAAAATCTATAAATAATTTAGAAGAGT-AAAATATCTCAATAGGAAACTGAGAAAAA-TGTAT-GAATAAGTACTTACTGGAAGAATTAAAAGAGTAGTACTAAAGACCGTACttatttatttaaactaatttaattaaaatttttaaa----ttaaaatttttCAATAATCAAGTAAAACAAA-TTAAACTT----AATAGAAACTTTAATTTTGAGATGC-AAAAGCATGAATGAAACACATTTGTGAAGCCCAAATATATTCAAGGTTTAAAAATATATTCAAGGTTTAAAGCTAACCCAAGTAAACTAAACTAGGCTAGGAATTAGAGTATT-TCAGTGCCCCAGcctctcc-caagtgtcccttcctaaaagaag i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6466077 496 - 25294431 TTTATAAGTAAGACCCAAAAATCAATACCCTTG-GGG-----AAAAA-ATATTAATTTGGCTACC------TTAAAGTCTTATCTCCTAGCAAAATAGTTTTACTACATTTTTT------GTCTTACTAACTA-GGAGACAATATGTAAACTATAT-----AA-----------TGAAAATCTATAAATAATATAGAGGAGTAAAAATATCTCAATAGAAAAGTG-GGAAAA-TGTAT-GAATAGGTACTTACTGGAAAAATTAAAAGAGTAGTACTAAAGACCttaattatttatttaaa-----tgaattaaaatttttaaa----ttaaaa-ttttCAATAATCAAGTAAAACAAA-TTAAAC------AATAGAAACTTTTGTTTTGAGATGC-AAAAGCATGAATCAAACACATTTGTGAAGCCTAAATATATTCAAGGTTGAAAAATATATTCCAGGTTTAAAGCTAACGCAAGTAAACCAAACTAGGCGAGGAATTAGAGTATT-TCAGTGTCCCAGGCTCTCC-CAGGTGTcctttcctaaaagaag i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4021872 508 - 6311556 TTTATAAGCAAGACTCAAAAATCAACACCCTTG-GGGAAAAAAAAAA-AGATTAATTTGGCTACCTTAAATTTAAAGTCTTCTCTCCTAGCAAAATAGTTTTACTACATTTTTT-------TCTTACTAACTA-GGAGACAATATGTAAA-----T-----AA-----------TGAAAATGTATAAATAATTTAGAAGAGTAAAAATATCTCAATAGAAAAGTGGGAAAAA-TGTAT-GAATAGGTACTTACTGGAAGAATTAAAAGAGTAGTACTAAAGGCCTTAATTGTTTATTTAAACTAATTTAATTAAAAATTTTAAA----TTAAAATTTTTTAATAATCAAGTAAA--AAA-TTAAACTT----AATAGAAACTTTTATTTTGAGATGCAAAAAGCATGAATCAAACACATTCATGAAGCCTAAATATATTCAAGGTTTAAAAATATATTCAAGGTTTAAAGCTAACCCAAGTAAACCAAACTAGGCCAGG-ATTAGAGTATT-TCAGTGCCCCAGCCTCTCC-CAAGTGTcccttcctaaaagaag i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14874996 511 + 15034901 TTTATAAGCAAGACTCAAAAATCAATACTCTTG-GGA----AAAAAA-TGATTAATTTGGCTACCTTAAATTTAAAGTCTTCTCTCCTAGCAAAATAGTTTTACTACATTTTTT-------TCTTACTAACTA-GGAGACAATATGTAAACtatat-----aa-----------tgaaaatctataaataatttagaagagtaaaaatatctcaatagaaaagtgggaaaaa-tgcat-gaataggtacttactggaagaATTAAAGGAGTAGTACTAAAGACCTTAATTatttatttaaacgaatttaattaaaaattttaaa----ttaaattttttcaataatcaagtaaaacaaa-ttaaactt----aaTAGAAACTTTTATTTTGAGATGC-AAAAGCATGAATCAAACACATTTGTGAAGCCTAAATATATTCAAGGTTTAAAAATATATTCAAGGTTTAATGCTAACCCAAGTAAACTAAACTAGGCCAGGAATTAGAGTATT-TCAGTGCCCCAGCCTCTCC-CAAGTGTcccttcctaaaagaag i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 897717 452 - 3201129 TTTTTAATCAAGA-ACGAAAATCAACACCCTTT-GAA-----AAATG-TGATAAAGTTGATTA-CATAGATTTAAAATTTTCTGTAATAGTCACATATTTTTAGTAC-TATTTT---------TTATAGACTACAAAGAAaatatttaaaacatatgcaccaa-----------aggacacctacaaaccatctaggaaaataaaagcatctgaatagaaaggta-ggaaag-tatag-gagtaggtatttgctggaagaatcaaaagatgagatctaaaggcctc---------------------------------------------acattccttgataaccagggaaagcaaa-ttaaacttatgaaataacaccttTAATTCTGAGAAGC-AACAGTGTGAATCAAACACGTTTGTGAAGCCTAAATTTATGCAGGTTATAAA-------------------ACTAATCTGTGTTAACGAAACTTGGCCAGGGATGAGACTATT-TCATTGCCCCAGGATCTCA-CCAATGTC--TTCCTAAAACAAG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43992143 469 - 53741614 tttcttaacaagaatcaataatcaatagccatg-aga-----aaaatatgattaatctgaccacattaaaattacagtattcttcattaacaaagagatcataa-acagatttcaaagttatttaatagagta-gaagaaaatattcaaagcatatttgacaagaaattgtagtaggactcctacaaatcatttaggaaagtaaaaatatct-aataagagaatg-ATACAGTTGTAT-AAATACGCATTTACTGGAGGAA-CAAAGCAGTAGACTCAGAAACCTTC--------------------------------------------AAATTCATCAATAATTAGCTAAAGCAAA-TGAAAATTATAACATAGAACATTAGATTTTGAGAAac-aaaagaatgaatcagacacatctgtaaattttaaat-------aattataaa-------------------gccaatatgtataaaacaaattaggccatgaatgagaatattgttagcattccagaacctcc-catgtgtcgc-tcctgagagaag i canFam3.chr19 I 234 C 0 s dasNov3.JH569232 1665534 296 + 5974691 TTCTTAAAAAAGACTCAAGAATGAGTAACCATA-AGA-----TATAT---------------------------------------------------------------------------------------A-------------------------CAA---------------------------------------------------------------G------TGTATGAAATAGGCATTTACTGGAAGAGTAAAAACAAAAGATCCCAAAACTATC--------------------------------------------AAACTCACTAAAAATCACATATTGTAAA-TTAAACTTTTGAGATAGCACATTTTATTC--AGATTC-AAAAGCATTCATAAAACAAATTTGTGAAACTTA-ATTGAT---AATTCTAAA-------------------ACCAACCTATCTACAACAAATTAGGCTAAGAATAACAATATTTTCAGTACAACAGAATCTCT-CATGTGTCCTTTCCCAAGAGAGG i dasNov3.JH569232 C 0 I 2127 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=2972672.000000 s hg38.chr9_KI270719v1_random 1255 329 + 176845 ctcctctcaccctaagttttatgtataatttttttgctgtgcttcaaaaaggtatagcatgtatgcatctctgaacaacataccttagttttttttggcctgctttgataattactatgaaatcctctttct-----gtattattttgtgccacactccttttgtt---caacatatgtttatgagtgacagccctgttgttgcaagcggttgtaatttatttattttcactgctctataatatttgattgttt-atatagatgagaattttctattttat-tccttatatacatttgtgttattttaaagtttgggtgcttaggagcaaagtcaatat s panTro5.chr4 135028426 325 + 194502333 ctcctctcaccctaagttttatgtataatttttttgctgtgcttcaaaaaggtataccatgtatgcatctctggacaacatacctta-ttttttttggcctgctttgataattaatatgaaatc---tttct-----gtattattttgtgccacactccttttgtt---caacatatgtttatgagtgacagccctgttgatgcaagcagttgtaatttatttattttcactgctctataatatttgattgttt-atatagatgagaattttctattttat-tccttatatacatttgtgttattttaaagtttgggtgctaaggagcaaagtcaatat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9119 328 - 70559 ctcctctcaccctaagttttatgtataatttttttgctgtgcttcaaaaaggtatagcatgtatgcatctctgaacaacatacctta-gtttttttggcctgctttgataattgatatgaaatcctctttct-----gtattattttgtgccacactccttttgtt---caacatatgtttatgagtgacagccctgttgttgcaagcagttgtaatttatttattttcactgctctataatatttgattgttt-atatagatgagaattttctattttat-tccttatatacatttgtgttattttaaagtttgggtgcttaggagcaaagtcaatat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90422334 328 - 115148730 c-cccctcaccctaagttttctgtataatttttttgctgtgcttcaaaaaggtataccatgtatgcatctctgaacaacataccttagctttttttggcctgctttgctaattaatatgaaatcctctttct-----gtattattttgtgccacactctttttgtt---caacatgtatttatgagtgacagccctgttgttgcaagcagttgtaatttatttattttcactgctctatgatattggattgttt-atatagatgagaattttctattttat-tccttatatacattcgtgttattttaaagtttgggtgcttaggagcaaagtcaatat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131359851 327 + 190429646 cccctctcaccctaagttttatgtataa-ttttttgctgtgcttcaaaaagtcatacaatgtatgcatctctgaacaacatacttta-gcttttttggcctgctttggtaattgatatgaaatcttcttttt-----gtattcttttgtgccacactccttttgtt---caacatatgtatataagtgacagccctgttgttgcaagcagttgtaatttatttattttcactgctctataatatttgattgttt-atatacatgagaattttctattttat-tctttatatacatttgtgttattttaaagtttgggtgcttaggagcaaagtcaatat i rheMac8.chr5 C 0 I 4917 s macFas5.chr5 130878605 327 + 189454096 cccctctcaccctaagttttatgtataa-ttttttgctgtgcttcaaaaagtcatacaatgtatgcatctctgaacaacatacttta-gcttttttggcctgctttggtaattgatatgaaatcttcttttt-----gtattcttttgtgccacactccttttgtt---caacatatgtatataagtgacagccctgttgttgcaagcagttgtaatttatttattttcactgctctataatatttgattgttt-atatacatgagaattttctattttat-tctttatatacatttgtgttattttaaagtttgggtgcttaggagcaaagtcaatat i macFas5.chr5 C 0 I 4914 s macNem1.NW_012010911v1 34869927 327 - 40319822 cccctctcaccctaagttttatgtataa-ttttttgctgtgcttcaaaaagtcatacaatgtatgcatctctgaacaacatacttta-gcttttttggcctgctttggtaattgatatgaaatcttcttttt-----gtattcttttgtgccacactccttttgtt---caacatatgtatataagtgacagccctgttgttgcaagcagttgtaatttatttattttcactgctctataatatttgattgttt-atatacatgagaattttctattttat-tctttatatacatttgtgttattttaaagtttgggtgcttaggagcaaagtcaatat i macNem1.NW_012010911v1 C 0 I 4859 s cerAty1.NW_012000798v1 4423599 327 - 9219162 cccctctcaccctaagttttatgtataa-ttttttgctgtgcttcaaaaagtcatacaatgtatgcatctctgaacaacatacttta-gcttttttggcctgctttgataattgatatgaaatcttcttttt-----gtattcttttgtgccacactccttttgtt---caacatatgtatataagtgacagccctgttgttgcaagcagttgtaatttatttattttcactgctctataatatttgattgttt-atatacatgagaattttctattttat-tctttatatacatttgtgttattttaaagtttgggtgcttaggagcaaagtcaatat i cerAty1.NW_012000798v1 C 0 I 5380 s chlSab2.chr7 78951338 326 + 135778131 cccctctcatcctaagttttatgtataa-ttttttgctgtgcttcaaaaagtcatacaatgtatgcatctctgaacaacatacttta-gcttttttggactgctttcataattgatatgaaatcttcttttt-----gtattcttttgtgccacactccttttgtt---caacatatgtatataagtgacaaccctgttgttgcaagcagttgtaatttatttattttcactgctctataatatttgattgttt-atatacataagaatttcctattttat-tctttatatacatttgtgttattttaaagtttgggtgcttaggag-aaagtcaatat i chlSab2.chr7 C 0 I 2912 s manLeu1.NW_012103277v1 2715943 328 - 3013352 cccctctcaccctaagctttatgtataatttttttgctgtgcttcaaaaagtcatacaatgtatgcatctctgaaaaatatacttta-gcttttttggcctgctttgataattgatatgaaatcttcttttt-----gtattctttggtgccacactccttttgat---caacatatgtatataagtgacagccctgttgttgcaagcagttgtaatttatttattttcactgctctataatatttgattgttt-atatacatgagaattttctattttat-tctttatatacatttgtgttattttaaagtttgggtgcttaggagcaaagtcaatat i manLeu1.NW_012103277v1 C 0 I 4679 s colAng1.NW_012114544v1 5952058 327 + 8656713 cccctctcaccctaagttttatgtatac-tttttcgctgtacttcaaaaagtcatacaatgtatgcatctctgaacaacatacttta-gcttttttagcctgctttgataattgatatgaaatcttcttttg-----gtattcttttgtgccacactccttttgtt---caacatatgtttataagtgacagccctgttgttgcaagcagttgtaatttatttattttcactgctctataatatttgattgttt-atatacatgagaattttctattttat-tctttctatacatttgtgttattttaaagtttgggtgcttaggagcaaagtcaatat i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129382782 327 - 190850796 cccatctcaccctaagttttatgtataa-ttttttgctgtgcttcaaaaagt-ataccatgtatgcatctctgaacaacatacctta-gc-tttttggcctgctttgataattaatataaaatactctttttt----gtattattttgttccatactctttttgtt---tgacatatgtttataaatgacagtactgttgttgcaagcagttgtactttatttattttctctgctctatagtattggattattttatatagatgagaattttctattttat-tctttatatacatttgtgttattttagcatttgggtccttaggagcaaagtcaatat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6466573 330 - 25294431 cccctctcaccctaagttttatgtataa-ttttttgctgtgcttcaaaaagt-ataccatgtatgcatctctgaacaacatacctta-gc-tttttggcctgctttgataattaatataaaatactcttttttaaaaaaattattttgttctataatctttttgtt---cgacatatgtttatgagtgacagtactgttgttgcaagcagttgcactttatttcttttctctgctctacagtatttg-ttttttcatatagatgagaattttctattttat-tctttatatacatttgtgttattttaacgtttgtgtccctaggagcaaagtcaatat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4022380 327 - 6311556 cccctttcactctaagttttatgtataa-tattttgctgtgcttcaaaatgt-gtaccatgtatgcatctctcaacaacatacctta-gc-tttttggcctgctttgataattaatataaaatactctttttt----taattattttgttccatactctttttgtt---tgacatatgtttatgagtgacagtactgttgttgcaagcagttgtattttatttattttctctgctctatagtattttattttttaatatagatgagaattttctattttat-tctttatatacatttgtgttattttaacgtttgggtccttaggagcaaagtcaatat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14875507 322 + 15034901 cccctctcaccctaagttttttgtataa-ttttttgctgtgcttcaaatagt-ataccatgtacacatctctgaacaacatacctta-gc-tttttggcctgctttgataattaatataaaatactctttttt---tgtattattttgttctata--ctttttgtt---cgacatatgtttatgagtgacagtactgttgttgcaagcagttgtacttta----ttttctctgctctatagtatttgatttttttatatagaagagaattttctattttat-tctttatatacatttgtgttatttaaacatttgggaccttaggagcaaagtcaatat i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 898169 310 - 3201129 CTCCTATTACCCTGGTTTTAGAGGGTAG---------TGTATTTTCAGGCG--ATACCCtgtatgtatctctaaacaacaaaacttg-ggttttggggcaagctttgacaatttatatgaaattctcttcttc----gta-tcttttgtg--acatttctttttttaaaaaatatgtctttatgagagataaccctgc---tgcaagtagctgtgatttatttgg----gcttttccatagtattctcttgttt-atatagaggagaattttctatactat-t-ttaatagatttttgtgtcatctgaaagtttggctacttagtggcaatgttgttat i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43992612 322 - 53741614 cattcattaccttatctcccg-gtataacgctattgctgtacttcaaaaagatacaccatgtatgcgtctttgaacaatatacctaa-gttttc----ccagctctgacaatttatacaaaattattttcatt----gtttatttttgtgaggcact--ttttatt---caaaatatttttatgggatacgtccctgttgttacaa-tggctgtggttgatttatttttactgctctatagtatttcagcattt-atataatgatgacttttctgttgtatgtttttatgctcatttaggttatctgcaatttggggtccttaggagcaaagttgatat i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=440233.000000 s hg38.chr9_KI270719v1_random 1584 52 + 176845 gaaaatacttggacatatgctctcagaattatatgcataagtttatctacaa s panTro5.chr4 135028751 52 + 194502333 gaaaatacttggacatatgctctcagaattatatgcataagtttatctacaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9447 52 - 70559 gaaaatacttggacatatgctctcagaattatatgcataagtttatctacaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90422662 52 - 115148730 gaaaatacttggacatatgctctcagaattatatgcataagtttatgtacaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365095 52 + 190429646 gaaaaTACTTGGACATATGCTCTCAGGAATATATGAATAAGTTTGTCTACAG i rheMac8.chr5 I 4917 C 0 s macFas5.chr5 130883846 52 + 189454096 GAAAATACTTGGACATATGCTCTCAGGAATATATGAATAAGTTTGTCTACAG i macFas5.chr5 I 4914 C 0 s macNem1.NW_012010911v1 34875113 52 - 40319822 gaaaaTACTTGGACATATGCTCTCAGGAATATATGAATAAGTTTGTCTACAG i macNem1.NW_012010911v1 I 4859 C 0 s cerAty1.NW_012000798v1 4429306 52 - 9219162 gaaaaTACTTGGACATATGCTCTCAGGAATATATGAATAAGTTTGTCTACAG i cerAty1.NW_012000798v1 I 5380 C 0 s chlSab2.chr7 78954576 52 + 135778131 GAAAATACTTGGACATATGCTCTCAGGAATATATGAATAAGTTTGTCTACAG i chlSab2.chr7 I 2912 C 0 s manLeu1.NW_012103277v1 2720950 52 - 3013352 GAAAATACTTGGACATATGCTCTCAGGAATATATGAGTAAGTTTGTCTACAG i manLeu1.NW_012103277v1 I 4679 C 0 s colAng1.NW_012114544v1 5952385 52 + 8656713 gaaaatacttggacatatgctctcaggaatatatgaataagtttttctacag i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129383109 52 - 190850796 gaatattcttcaacataggctctcaagaatatatgcttaaatttaggtatag i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6466903 52 - 25294431 ggaaatacttgaacacgggctctcaagaatatatgcttaaatttatgtgtag i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4022707 52 - 6311556 gagaatacttgaacatagactctcaagaatatatgcttaaatttatgtatag i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14875829 52 + 15034901 gaaaatactcaaacataggctctcaagaatatatgcttaaatttatgtgtag i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 898479 45 - 3201129 aaaaatatttggatatatgttttaag-------tacatacatttatcttagg i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 43992934 51 - 53741614 gaaaatacttgggcatatgatatgaagaacacacgcata-gtttatctaggg i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=1476235.000000 s hg38.chr9_KI270719v1_random 1636 138 + 176845 catataactatccaaggaattttaggag-caaacatatgtggatacttatttaatcacagactaac------tttttttcaaatcagttgtatcaatttatacttcttcctgtggtacctaagatttcAT-AAAATTATACTTTCA s panTro5.chr4 135028803 138 + 194502333 catataactatccaaggaattttaggag-caaacatatgtggatacttatttaatcacagactaac------tttttttcaaatcagttgtatcaatttatacttcttcctgtggtacctaagatttcAT-AAAATTATACTTTCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9499 138 - 70559 catataactatccaaggaattttaggag-caaatatatgtggatacttatttaatcacagactaac------tttttctcaaatcagttgtatcaatttatacttcttcctgtggtacctaagatttcAT-AAAATTATACTTTCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90422714 137 - 115148730 catataactatccaaggaattttaggag-caaac--atgtggatacttatttaatcacagactaac-----ttttttttcaaatcagttgtatcaatttatacttcttccTATGGTACCTAAGATTTCAT-AAAATTATACTTTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365147 138 + 190429646 CATATAACTATCCAAGGAATGTTAGGAG-CAAACATATGTGGATACTTATTTAATCACAGACTAAC------TTTTTTTCAAATCAGTTGTATCAATTCATACTTCTTCCTGTGGTACCTAAGATTTCAT-GAAATTATACTTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130883898 138 + 189454096 CATATAACTATCCAAGGAATGTTAGGAG-CAAACATATGTGGATACTTATTTAATCACAGACTAAC------TTTTTTTCAAATCAGTTGTATCAATTCATACTTCTTCCTGTGGTACCTAAGATTTCAT-GAAATTATACTTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34875165 138 - 40319822 CATATAACTATCCAAGGAATGTTAGGAG-CAAACATATGTGGATACTTATTTAATCACAGACTAAC------TTTTTTTCAAATCAGTTGTATCAATTCATACTTCTTCCTGTGGTACCTAAGATTTCAT-GAAATTACACTTTCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4429358 138 - 9219162 CATATAACTATCCAAGGAATGTTAGGAG-CAAACATATGTGGATACTTATTTAATCACAGACTAAC------TTTTTTTCAAATCAGTTTTATCAATTCATACTTCTTCCTGTGGTACCTAAGATTTCAT-GAAATTATACTTTCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78954628 138 + 135778131 CATATAACTATCCAAGGAATTTTAGGAG-CAAACATATGTGGATACTTATTTAATCACAGACTAAC------TTTTTTTCAAATCAGTTGTATCAATTCAGACTTCTTCCTGTGGTACCTAAGATTTCAT-GAAATTATACTTTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2721002 138 - 3013352 CATATAACTATCCAAGGAATGTTAGGAG-CAAACATATGTGGATACTTATTTAATCACAGACTAAC------TTTTTTTCAAATCAGTTGTATCAATTCATACTTCTTCCTGTGGTACCTAAGATTTCAT-GAAATTATACTTTCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5952437 139 + 8656713 catataactatccaaggaattttaggag-caaacatatgtggatacttacttaatcacagactaac-----ttttttttcaaatcaattgtatcaattcatacttcttcctgtggtacctaagatttcAT-GAAATTATACTTTCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129383161 143 - 190850796 catataactatccagttaattttaggag-caaagatatgtggacacttatttaattacagactaac-ttttttttttttcaaatcagttgtatcagtttatacttctttctgtggtacataaaatttcAT-AAAATTATACTTTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6466955 141 - 25294431 catataactatccagctacttttaggag-caaagatatgtggatacttatttaactacagactaac---ttttttttttcaaatcagttgtattagtttatacttctttctgtggtacataaaatttcAT-AAAATTATACTTTCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4022759 144 - 6311556 catgtaactatccagttaattttaggag-caaagatatgtggatacttatttaactacagactaactttttttttttttcaaatcagttgtatcagtttatacttcTTTCTGTGATACATAAAATTTCAT-AAAATTATACTTTCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14875881 137 + 15034901 catataactatccagttaattttaggag-caaagatatggggacatttagttaactacagactaat----tttttttttcaaatcagttgtatcagtttatact--TTTCTGTGGTACATAAAATTTCAT--AAATTATACTTTCA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26284357 140 - 93316391 CATATAACTACTCAAGGAATTTTAGGAG-AAAATATTTGTAGATACTTATTTAATTACAGACTTAT----TCTTTTTTTTAAATCAGTTGTATCAATTTACACTTCTTCCCATTGTATATGCAATTTCAT-AAAGTCATATTTTTA i micMur3.chr14 N 0 I 18 s otoGar3.GL873702 898525 139 - 3201129 cacgtaattacccaaggaattatagggtcaaagaatgtgtggatacttattaaattataggctcat----tttttttttcaaatcatttgtatcaaattatacttcctccTATT-CATATCCAATTT-AT-AAAGTTATATTTTTC i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 43992985 136 - 53741614 tatgtaactaccc---------tagagg-caaaagaatgtagatatttatttaaatagagactgatttttttttttttccaaatcagttgtatcaattttcactttctcctgtagcatatgggatttcAGGGAAATCACATTTTTC i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=145964.000000 s hg38.chr9_KI270719v1_random 1774 21 + 176845 ATCCATGGGTTTAGCAAAATA-------------------------------------------------- s panTro5.chr4 135028941 20 + 194502333 ATC-ATGGGTTTAGCAAAATA-------------------------------------------------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9637 21 - 70559 ATCCATGGGTTTAGCAAAATA-------------------------------------------------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90422851 21 - 115148730 ATCCTTGGGTTTAGCAAAATA-------------------------------------------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365285 21 + 190429646 ATCCATGAGTTTAGCAAAATA-------------------------------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130884036 21 + 189454096 ATTCATGAGTTTAGCAAAATA-------------------------------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34875303 21 - 40319822 GTCCATGAGTTTAGCAAAATA-------------------------------------------------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4429496 21 - 9219162 ATCCATGAGTTTAGCAAAATA-------------------------------------------------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78954766 21 + 135778131 ATCCATGAGTTTAGCAAAATA-------------------------------------------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2721140 21 - 3013352 ATCCATTAGTTTAGCAAAGTA-------------------------------------------------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5952576 21 + 8656713 ATCCATGAGTTTAGCAAAATA-------------------------------------------------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129383304 21 - 190850796 ATCCATTATTTTAGCAAAAGA-------------------------------------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6467096 21 - 25294431 ATCCATGATTTTAGCAAAAGA-------------------------------------------------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4022903 21 - 6311556 ATCCATGATTTTAGCAAAAGA-------------------------------------------------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14876018 21 + 15034901 ATCCATGATTTTAGAAAAAGA-------------------------------------------------- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 898664 20 - 3201129 ATCTGTCAGTAAAGAGAGAA--------------------------------------------------- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43993121 71 - 53741614 ATCCATCAGTTTAGCAAAAAATTGACCAAGGGCCAACAAATTATTTATTACCTCCACAAagatggtacata i canFam3.chr19 C 0 C 0 e micMur3.chr14 26284497 18 - 93316391 I e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=1488901.000000 s hg38.chr9_KI270719v1_random 1795 142 + 176845 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTTAAGAccactttagatgaaaatttttg-at-atctatt----------------------------------aaattttacaatgtgaataacttataagcacaattttccttaactcatcatctgtctt-a-cgaaatact s panTro5.chr4 135028961 137 + 194502333 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAA-----GAccactttagatgaaaatttttg-at-atctatt----------------------------------aaattttacaatgtgaataacttataagcacaattttccttaactcatcctctgtctt-a-cgaaatact i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9658 142 - 70559 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTTAAGAccactttagatgaaaatttttg-at-atctatt----------------------------------aaattttacaatgtgaataacttataagcacaattttccttaactcatcatctgtctt-a-tgaaatact i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90422872 142 - 115148730 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTTAAGAccactttagatgaaaatttttg-at-atctatt----------------------------------aaatgttacaatgtgaataacttataagcacaattttccttaactcatcatctgtctt-a-tgaaatact i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365306 143 + 190429646 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTTAAGAccaccttagatgaaaatttatg-at-atctatt----------------------------------aaattttacaatgtgaataacttacaagcaaaattttccttaactcatcatctgtctt-agagaaatact i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130884057 143 + 189454096 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTTAAGAccaccttagatgaaaatttatg-at-atctatt----------------------------------aaattttacaatgtgaataacttacaagcaaaattttccttaactcatcatctgtctt-agagaaatact i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34875324 143 - 40319822 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTTAAGAccaccttagatgaaaatttatg-at-atctatt----------------------------------aaattttacaatgtgaataacttacaagcaaaattttccttaactcatcatctgtctt-agagaaatact i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4429517 143 - 9219162 ------ATTC-------------------------------------------------------AAAGTTTAATAACATCAAATTGACATCTATAATTAAAGAccaccttagatgaaaatttatg-at-atctatt----------------------------------aaattttacaatgtgaataacttacaagcaaaattttccttaactcatcatctgtctt-agagaaatact i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78954787 143 + 135778131 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTtatgaccaccttagatgaaaatttatg-at-atctatt----------------------------------aaattttacaatgtgaataacttacaagcaaaattttccttaactcatcatctgtctt-agagaaataat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2721161 143 - 3013352 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTAAAGAccaccttagatgaaaatttatg-at-atctatt----------------------------------aaattttacaatgtgaataacttacaagcaaaattttccttaactcatcatctgtctt-agagaaatact i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5952597 143 + 8656713 ------ATTC-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTTAAGAccaccttagatgaaaacttatg-at-atctatt----------------------------------acattttacaatgtgaataacttacaagcaaaattttccttaactcatcatctgtctt-agagaaatact i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129383325 141 - 190850796 ------ATTA-------------------------------------------------------AAAGTTTAATAATACCAAATTGACATCTATAATTTAATaccactttagatgaaaatttatg-at-atctatt----------------------------------aaatttttcaatgtgaataacttataa--gcacgtttccttaactcatgatctgtctt-agacaaatact i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6467117 143 - 25294431 ------ATTA-------------------------------------------------------AAAGTTTAATAACATCAAATTGACATCTATAATTTAATAccactttagatgaaaatgtatg-at-atctatt----------------------------------aaattttacaatgtgaataacttataatcacacgtttccttaactcatggtctgtctt-agagaaatact i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4022924 142 - 6311556 ------ATTA-------------------------------------------------------AAAGGTTAATAATATAAAATTGACATCTATAATTTAATAccactttagaggaaaatttatg-at-atctatt----------------------------------aaattttacaatgtgaataac-tataaacacatgtttccttaactcatgatctgtctt-agagaaatact i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14876039 144 + 15034901 ------ATTA-------------------------------------------------------AAAGTTTAATAATATCAAATTGACATCTATAATTTAATAccactttagttgaaaatttatg-at-atctatt----------------------------------aaattttacaatgtgaataacttataagcacacgtttccttaactcatgatctgtcttaagagaaatact i aotNan1.NW_018507635v1 C 0 I 8 s micMur3.chr14 26284515 143 - 93316391 ------ATAT-------------------------------------------------------AAAATTTAATAATATCAAATTGTCATCTATAGTATAAAAGTactttagatgacaatttttg-ac-atctatt----------------------------------aaattttacaatgtgagcacctcataaatgcaatttctcttagcttatcaactgtctt-agagaaatact i micMur3.chr14 I 18 C 0 s otoGar3.GL873702 898684 145 - 3201129 ------ATTC-------------------------------------------------------AAAGTTCAATAATATCAAGTTGTCATCCATAATGTAAGACCACTTTAGATGATAATTCTTATACAATTTCTT----------------------------------AAATTTTATGATGTGTTTACATCATAAATGCAATTTTCTTTAATTCATCATTCATCTT-AGAAAAATGCT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43993192 237 - 53741614 tttcagattttgtgagccttgttgtcatctttgtcacaactactaaactcttttgatgcagcacaaaaacaTAATAATATCAAATTGCTACCTGTAATGTAAAACCACGTTAGATGGCAATTT-TA-AC-ATCTATTTAATTTTACAACATGTAAAAAAAAAAACAAAAAAAAATTTTACAACATGTATGTCTTCTAAATGCAGCTTCTTTCAAGTCATCatctatctt-agagaaatatt i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=97910.000000 s hg38.chr9_KI270719v1_random 1937 12 + 176845 aacatatg--------tgca s panTro5.chr4 135029098 12 + 194502333 aacatatg--------tgca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9800 12 - 70559 aacatatg--------tgca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90423014 20 - 115148730 aacacgtgcaataaaatgca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365449 12 + 190429646 aacacatg--------tgca i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130884200 12 + 189454096 aacacatg--------tgca i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34875467 12 - 40319822 aacacatg--------tgca i macNem1.NW_012010911v1 C 0 I 1 s cerAty1.NW_012000798v1 4429660 12 - 9219162 aacacatg--------tgca i cerAty1.NW_012000798v1 C 0 I 1 s chlSab2.chr7 78954930 12 + 135778131 aacacatg--------tgca i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012103277v1 2721304 12 - 3013352 aacacatg--------tgca i manLeu1.NW_012103277v1 C 0 I 1 s colAng1.NW_012114544v1 5952740 12 + 8656713 agtgcatg--------tgca i colAng1.NW_012114544v1 C 0 I 1 s calJac3.chr3 129383466 12 - 190850796 aacacatc--------taca i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6467260 12 - 25294431 aacacatc--------taca i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4023066 12 - 6311556 aacacatc--------taca i cebCap1.NW_016107420v1 C 0 I 1 s micMur3.chr14 26284658 12 - 93316391 aacatatg--------tgcc i micMur3.chr14 C 0 I 1 s otoGar3.GL873702 898829 12 - 3201129 AACATATG--------TATC i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 43993429 12 - 53741614 aacatata--------tacc i canFam3.chr19 C 0 I 1 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e aotNan1.NW_018507635v1 14876183 8 + 15034901 I a score=136462.000000 s hg38.chr9_KI270719v1_random 1949 13 + 176845 ata-----------aaatgcaata s panTro5.chr4 135029110 13 + 194502333 ata-----------aaatgcaata i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9812 13 - 70559 ata-----------aaatgcaata i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90423034 24 - 115148730 ataggatgtcaattaaatgcaata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365462 13 + 190429646 ata-----------aaatgcaata i rheMac8.chr5 I 1 C 0 s macFas5.chr5 130884213 13 + 189454096 ata-----------aaatgcaata i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34875480 13 - 40319822 ata-----------aaatgcaata i macNem1.NW_012010911v1 I 1 C 0 s cerAty1.NW_012000798v1 4429673 13 - 9219162 ata-----------aaatgcaata i cerAty1.NW_012000798v1 I 1 C 0 s chlSab2.chr7 78954943 13 + 135778131 ata-----------aaatgcaaca i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012103277v1 2721317 13 - 3013352 ata-----------aaatgcaata i manLeu1.NW_012103277v1 I 1 C 0 s colAng1.NW_012114544v1 5952753 13 + 8656713 atg-----------aaatgcaata i colAng1.NW_012114544v1 I 1 C 0 s calJac3.chr3 129383479 13 - 190850796 ata-----------aaatgccatg i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6467273 13 - 25294431 ata-----------aaatgcaacg i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4023079 13 - 6311556 aca-----------aaatgcaatg i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14876191 13 + 15034901 aga-----------aaaggcaatg i aotNan1.NW_018507635v1 I 8 C 0 s micMur3.chr14 26284671 13 - 93316391 ata-----------aaatgcagta i micMur3.chr14 I 1 C 0 s otoGar3.GL873702 898842 13 - 3201129 ATA-----------AAGTACAATA i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 43993442 13 - 53741614 ata-----------aaatgctata i canFam3.chr19 I 1 I 162 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=220447.000000 s hg38.chr9_KI270719v1_random 1962 25 + 176845 ---------------------------------------ggatgtcaattacagctttttaaaa-- s panTro5.chr4 135029123 25 + 194502333 ---------------------------------------ggatgtcaattacagcttttaaaaa-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9825 25 - 70559 ---------------------------------------ggatgtcaattacagctttttaaaa-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90423058 25 - 115148730 ---------------------------------------ggatgtcaattacagctttttaaaa-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365475 25 + 190429646 ---------------------------------------ggatgtctattacagcttttaaaaa-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130884226 25 + 189454096 ---------------------------------------ggatgtctattacagcttttaaaaa-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34875493 25 - 40319822 ---------------------------------------ggatgtctattacagcttttaaaaa-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4429686 25 - 9219162 ---------------------------------------ggatgtctattacagcttttaaaaa-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78954956 25 + 135778131 ---------------------------------------ggatgtctattgcagcttttaaaaa-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2721330 25 - 3013352 ---------------------------------------ggatgtctattacagcttttaaaaa-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5952766 25 + 8656713 ---------------------------------------ggatatctattacagcttttaaaaa-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129383492 25 - 190850796 ---------------------------------------ggatgtctattatagctttataaaa-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6467286 25 - 25294431 ---------------------------------------ggatgtctattacagctttataaaa-- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4023092 25 - 6311556 ---------------------------------------ggatgtctattacagctttataaaa-- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14876204 25 + 15034901 ---------------------------------------ggatgtctatcacagctttataaaa-- i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26284684 25 - 93316391 ---------------------------------------gggtttctattgtggctttttacaa-- i micMur3.chr14 C 0 I 22 s otoGar3.GL873702 898855 25 - 3201129 ---------------------------------------GAATAACTATTGTAACTATTTCAAA-- i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 43993617 66 - 53741614 agatgctcaaccactgagccacccaggcatcctgcaaggatatatctaatgcatctttttttaggg i canFam3.chr19 I 162 C 0 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=125553.000000 s hg38.chr9_KI270719v1_random 1987 17 + 176845 atagtcaaaa-gcccatt s panTro5.chr4 135029148 17 + 194502333 atagtcaaaa-gcccatt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9850 17 - 70559 atagtcaaaa-gcccatt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90423083 17 - 115148730 atagtcaaaa-gcccatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365500 17 + 190429646 atagtcaaaa-tcccatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130884251 17 + 189454096 atagtcaaaa-tcccatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34875518 17 - 40319822 atagtcaaaa-tcccatt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4429711 17 - 9219162 atagtcaaaa-tcccatt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78954981 17 + 135778131 atagtcaaaa-tcccatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2721355 17 - 3013352 atagtcaaaa-tcccatt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5952791 17 + 8656713 atagtcagaa-tcccatt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129383517 18 - 190850796 atagtcaaaaatctcatt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6467311 18 - 25294431 atagtcagaaatcgaatt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4023117 18 - 6311556 atagtcaaaagtctaatt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14876229 18 + 15034901 atagtcaaaaatctaatt i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 898881 13 - 3201129 TTACTCAAAA-----ATG i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 43993683 16 - 53741614 atagtcaaat-ccttat- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26284709 22 - 93316391 I e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=4779438.000000 s hg38.chr9_KI270719v1_random 2004 456 + 176845 aaatagattaaatgtccac--caatagagaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATGATAAAGATTAACATGTGTTGAATCACTAAGATTTCCAATACATATTAAATTGAAAAATAAAAACACATTATTGTGG-TTAAAAATacacaaagtattagattatcaaatcagactcacatgcatcggagatcttatgcaaacttaactaataattttatggataaaaattattgtgaggtacaggtggagcaaggt-aaggtcagatagcactgtgagaatccctgggtcctttcctcccacatcagatatgctttgaacaaggataatagatgatgattctgagtaagatgtgcggtcatctcacttacacagagga--gatatttagatcacaaaatatctcat-tttgtctttagatggtccaggaaactatg------ccccatgagtcaaa-g s panTro5.chr4 135029165 456 + 194502333 aaatagattaaatgtccac--caatagagaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATGATAAAGATTAACATGTGTTGAATCACTAAGATTTCCAATACATATTAAATTGAAAAATAAAAACACATTATTGTGG-TTAAAAATacacaaagtattagattatcaaatcagacttacatgcatcagagatcttatgcaaacttaactaataattttatggataaaaattattgtgaggtacaggtggagcaaggt-aaggtcagatagcactgtgagaatccctgggtcctttcctcccacatcagatatgctttgaacaaggataatagatgatgattctgagtaagatgtgcggtcatctcacttacacagagga--gatatttagatcacaaaatatctcat-tttgtctttagatggtccaagaaactatg------ccccatgagtcaaa-g i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 9867 455 - 70559 aaatagattaaatgtccac--caatagagaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATGATAAAGATTAACATGTGTTGAATCACTAAGATTTCCAATACATATTAAATTGAAAAATAAAAACATATTATTGTGG-TTAAAAATacacaaagtattagattatcaaatcagactca-gtgcatcggagatcttatgcaaacttaactaataattttatggataaaaattattgtgaggtacaggtggagcaaggt-aaggtcagatagcacagtgagaatccctgggtcctttccttgcacatcagatatgctttgaacaaggataatagatgatgattctgagtaagatgtgcggtcatctcacttacacagagga--gatatttagatcacaaagtatctcat-tttgtctttagatggtccaggaaactatg------ccccatgagtcaaa-g i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90423100 452 - 115148730 aaatagattaaatatccat--caatagagaaa-ggctaagtaaa-tatgacatatctaaaagttaaagaaatgataaagattaacatgtgttgaatcactaagatttccaatgcatattaaattgaaaaataaaaacac---attgTGG-TTAAAAATacacaaagtattaaattatcaaatcagactcacaggcatcagagatcttatgcaaacttaactaataactttatggataaaaattattgtgaggtacaggtggagcaaggt-aaggtcagatagcactgtgagaatccctgggtcctttcctcccacatcagatgtgctttgaccaaggataatagatgatgattctgagtaagatgtgcggtcatctcacttacacagagga--gatgtttagatcacgaaatatctcat-tttgtctttagatggcctaggaaactatg------tcccatgagtcaaa-g i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365517 454 + 190429646 aaatagattaaatgtctac--caatagagaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATGGTAAAGATTAACATGTGCTGAATCACTAAGATTTCCAGTGTATATTAAATTGAAAAATAAAAACACATTATTGTGG-TTAAAAATacacaaagtattagattatcaaatcagactcacatgcatcagagatcttatgcaaacttaactattatttttaaggataaaaaatattgtgaggtacaggtgaagcaaggt-aaggccagatagcactgtgagaatccctgggtccttttctctcacatcagatgtgctttgaccaaggataatagatgacgattctgagtaagatatgcggtcatcttacttacacagagga--gatatttagatcatgaaatatctcat-tttgtctttagaagatccaggaaac--tg------tctcatgaatcaaa-g i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130884268 454 + 189454096 aaatagattaaatgtctac--caatagagaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATGGTAAAGATTAACATGTGCTGAATCACTAAGATTTCCAGTGTATATTAAATTGAAAAATAAAAACACATTATTGTGG-TTAAAAATacacaaagtattagattatcaaatcagactcacatgcatcagagatcttatgcaaacttaactattatttttaaggataaaaaatattgtgaggtacaggtgaagcaaggt-aaggccagatagcactgtgagaatccctgggtccttttctctcacatcagatgtgctttgaccaaggataatagatgacgattctgagtaagatatgcggtcatcttacttacacagagga--gatatttagatcatgaaatatctcat-tttgtctttagaagatccaggaaac--tg------tctcatgaatcaaa-g i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34875535 454 - 40319822 aaatagattaaatgtctac--caatagagaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATGGTAAAGATTAACATGTGCTGAATCACTAAGATTTCCAGTGTATATTAAATTGAAAAATAAAAACACATTATTGTGG-TTAAAAATacacaaagtattagattatcaaatcagactcacatgcatcagagatcttatgcaaacttaacaattatttttaaggataaaaaatattgtgaggtacaggtgaagcaaggt-aaggccagatagcactgtgagaatccctgggtccttttctctcacatcagatgtgctttgaccaaggataaaagatgacgattctgaataagatatgcggtcatcttacttacacagagga--gatatttagatcatgaaatatctcat-tttgtctttagaagatccaggaaac--tg------tctcatgaatcaaa-g i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4429728 454 - 9219162 aaatagattaaatgtctac--caatagaaaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATGGTAAAGATTAACATGTGCTGAATCACTAAGATTTCCAGTGTATATTAAACTGAAAAATAAAAACACATTATTGTGG-TTAAAAATacacaaagtattagattatcaaatcagactcacatgcatcagagatcttatgcaaacttaactattaattttaaggataaaaaatattgtgaggtacaggtgaagcaaggt-aaggccagataacactttgagaattcctgcatccttttctctcacatcagatgtgctttgaccaaggataatagatgacgattccaagtaagatgtgcggtcatcttacttacacagagga--aatatttagatcatgaaatatctcat-tttgtctttagaagatccaggaaac--tg------tctcatgaatcaaa-g i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78954998 454 + 135778131 aaatagattaaatgtctac--caacagagaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATGGTAAAGATTAACATGTGCTGAATCACTAAGATTTCCAGTGCATATTAAATTGAAAAATAAAAACACATTATTGTGG-TTAAAAATacacaaagtattagattatcaaatcagactcacatgcatcagagatcttatgcaaacttaactattaattttaaggat-aaaaatattgtgaggtacaggtgaagcaatgtaaaggccagatagcactgtgagaatccctgggtcctttcctctcacatcagatgtgctttgaccaaggataatagatgacgattttgagtaagatgtgcagtcatcttacttacacagagga--gatatttagatcatgaaatatctcat-tttgtctttagaAGATCCAGGAAAC--TG------TCCCACAGATCAAA-G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2721372 454 - 3013352 aaatagattaaatgtctac--caatagaaaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATGGTAAAGATTAACATGTGCTAAATCACTAAGATTTCCAGTGTATATTAAATTGAAAAATAAAAACACATTATTGTGG-TTAAAAATacacaaagtattagattatcaaattagactcacatgcatcagagatcttatgcaaacttaactattaattttaaggataaaaaatattgtgaggtacaggtgaagcaaggt-aaggccagatagcactgtgagaatccctgcgtccttttctctcacatcagatgtgctttgaccaaggataatagatgacgattctgagtaagatgtgcggtcatcttacttacacagagga--gatatttagatcatgaaatatctcat-tttgtctttagaagatccaggaaac--tg------tctcatgaatcaaa-g i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5952808 453 + 8656713 aaatagattaaatgtctac--caatagagaaatggttaagtaaa-tatgacatatctaAGAGTTAAAGAAATGGTAAAGATTAACATGTGCTGAATCACTAAGATTTCCAGTGCATATTAAATTGAAAAATAAAAA-ACATTATTGTGG-TTAAAAATacacaaagtattagattatcaaatcagactcacatgcatcagagatcttatgcaaacttaactattaattttaaggataaaaaatattgtgaggtacaggtgaagcaaggt-aaggccaggtagcactgtgagaatccctgggtcctttcctctcacatcagatgtgctttgaccagggatagtagatggcgattctgagtaagatgtgcggtcatcttacttacacagagga--gatatttagatcatgaaatatctcat-tttgtctttagaagatccaggaaac--tg------tcccatgaatcaaa-g i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129383535 449 - 190850796 aagtagattgaatatccac--caataga-aaatggc----taaa-taTGACATATCTAAGAGTTAAAGGAATAATAAAGATTAATGTGTGCTGAATCACTAATATTTCCAATGaatattaaatttaaaaataaaaataCCTTATTGTGG-TTAAAACTacacagattattcaattatcaaatcatattcacatgcatcagagatcttatgcaaacctaactaataattttaaggat-aaagttattgtgaggtacaggtgg-tcaaggt-aaggtcaaatagcactgtgagaatcctttggttctttcctcccacatccgatgtactttgaccaagaataataagtgatgattctgaataagatgtgtagtcatctcacttacacggagta--gatatttagatcatgagatatctcat-tttgtctttagatgatccaggacactatg------ccccataagtcaaa-g i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6467329 446 - 25294431 caatagattgaatatccac--aaatagagaaatggctaagtaaa-tatgacatatctaAGAGTTAAAGAAATAATAAAGATTAACATGTGCTGAATCACTAATATTTCCAATGAATATTAAATTGAAAAATAAAAATCCATAATTGTGG-TTAAAACTacccaaattattggatcatcagatcatattcacatgcatcaaagatcttatgcaaacctaactaataattttcaggacaaaagttattgtgaggtacacgtggagcaaggt-aaggtcaaatagcactgtga----------gtccttccctcccacatccaatatacttggaccaagaataataagtgatgattctgagtaagatgtgtagtcatctcacttacacagagaa--gatatttagatcatgaggcatctcat-tttgtctttagatgatccaggaaactatg------ccccatgagtcaaa-g i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4023135 455 - 6311556 caatagattaagtatccac--caatagagaaatggctaagtaaa-tatgac--atCTAAGAGTTAAAGGAATAATAAAGATTAACATGTGCTGAATCACTAATATTTCCAATGAATATTAAATTGGAAAATAAAAATACATTATTGTGG-TTAAAACTacacaaattatttgattatcaaatcatattcacatgcatcagagatcttatgcaaacttaactaataattttaaggataaaagttattgtgaggtacaggtggagcaaggt-aaggtcaaatagcactgtaagaatcccttgattctttcctcccacatccgatatactttgaccaagaataataagtgatgattctgagtaagatatgtagtcatctcacttacacagagaa--gatatttagatcatgagatatctcat-tttgtctttagatgatccaggaaactatg------ccctatgagtcaaagg i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14876247 452 + 15034901 caatagattgaatatccac--caatagagaaatggctaagtaaa-tctaacatatctaAGAGTTAAAGGAATAATAAAGATTAATGTGTGCTGAATCACTAATATTTCCAATGAATATTAAATTGAAAAATAAAAATACATTATTGTAG-TTAAAACTacacaaattatttgattatcaaatcatattcacatgtatcagagatcttatacaaacttaactgataattttaaggataaaagctattgtgaggtacaggtggagcaaggt-aaggtcaaatagcactgtgggaatcctttggtcctttcctcccacatcagatgtactttgaccacggataataagtgatgattctgagtaagatgtgcagtcatttc----acacagagaa--gatatttagatcatgagatatctcat-tttgtctttagattatccaggaaactatg------ccccatgagtcaaa-g i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26284731 453 - 93316391 aaatagattaaatgtccaccaaaaaaaagaaatggctaagtaaactatgacatatctaagagttaaaggaatgatatagattgccatgtattaaatcactaagatctctaatgca--tttaattgaaaaaTAAAAATGCATTATTGTGG-TTAAAAATGcacaaagtattgaatcatcaaatcagacttacttgaatcagagatcttttgcaaacttaat----aattttaaagataaaagttattgcaaggcacagataaagcagggt-aaggtcaactcatagtgtgtgaatcactaggtcccttcttcccacatcagatgagttttgtccaaggttaatagatgatgttcctaaata-agtatgtagtcacctcagttacacagagga--aacatttagatcatgaaatatcttctttttgtctttagatgttccaggaaactatg------ccccataaatcaaa-g i micMur3.chr14 I 22 I 337 s otoGar3.GL873702 898894 440 - 3201129 GAATAAAGCAAAC--------CAAAACATAAGTGGCTAAGTAAACTATAATGTATCTACATGTCAGAGGAATGATAAAGATTGACATGTATTAAATCATTAAGATCTCTAATGAAT-TTTAATTGAAACATAAAAATGCATTATTACAGTTTTAAAAAATACCATGAATAACATTATCAAAGCAGACTAACTTGCACCAGAAATCTTATGTAAACTtagc----aattttaaaaagaaagattattgcaa-gcacaaagagaggagggt-caggtcaaatgacaccccatggatctgtaggtcccttattcccacatcagatgtgttttgaccaaccataacagatcacgtttctatgtagagtgtgcagtcaac----ttacacagagga--gacatttaggtcatgaaatgtctcacatttgtcctt---tgatctaggaaactatg------ccttgcaaatcaaa-a i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43993699 451 - 53741614 aaatatcttaaatgcctat--caatagagataaggctatgtaaactacggcatatTGAAGGGTTAACAGAATGACCTGGATTAACGTGTACTGAATCAATAAGCTCTAGGAAGCATACTAAATTGAAA-ATTTAAATACACT-TTGTGG-CTTAAA-Cacacaaagtattgcattatcagatcagactgatgtgcattagagattttatgcaaac--aatt-----tctcaaggataaaaattattgcaaggcacaggtgaagctggat-gcagtcaggtc-taccatgaggctccct-ggttccttattcccacatcacatgtgttttagccaaagataacagatgatatttctaagtaacgtgtgcagttccttcacttacaaaagggatctacatttagatcatgaaacatct--t-tttgtctttggatggttcatgaaactatgccccgcccccataagtcaaa-g i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=291846.000000 s hg38.chr9_KI270719v1_random 2460 41 + 176845 agatttag---gtt---ttattataaacaaccctag-----------------aaa--------agaaatca s panTro5.chr4 135029621 41 + 194502333 agatttag---att---ttatcataaacaaccctag-----------------aaa--------agaaatca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 10322 41 - 70559 agatttag---gtt---ttattataaacaaccctag-----------------aaa--------agaaatca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90423552 41 - 115148730 agatttag---gtt---ttattataaacaatcctag-----------------aaa--------agaaatca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131365971 40 + 190429646 agatttag---gtt---tcattataaacaatcctag------------------aa--------aaaaaaca i rheMac8.chr5 C 0 I 5 s macFas5.chr5 130884722 40 + 189454096 agatttag---gtt---tcattataaacaatcctag------------------aa--------aaaaaaca i macFas5.chr5 C 0 I 5 s macNem1.NW_012010911v1 34875989 42 - 40319822 agatttag---gtt---tcattataaacaatcctag----------------aaaa--------aaaaaaca i macNem1.NW_012010911v1 C 0 I 5 s cerAty1.NW_012000798v1 4430182 41 - 9219162 agatttag---gtt---tcattataaacaatcctag-----------------aaa--------aaaaaaca i cerAty1.NW_012000798v1 C 0 I 5 s chlSab2.chr7 78955452 58 + 135778131 CGATTTAG---CTT---TCATTATAAACAAACATAGAGGaaaaaaaaaaaaaaaaa--------aaaaaaCA i chlSab2.chr7 C 0 I 5 s manLeu1.NW_012103277v1 2721826 42 - 3013352 agatttag---gtt---tcattataaacaatcctag----------------aaaa--------aaaaaaca i manLeu1.NW_012103277v1 C 0 I 5 s colAng1.NW_012114544v1 5953261 44 + 8656713 agatttag---gtt---tcattataaaaaatcctag--------------aaaaaa--------aaaaatca i colAng1.NW_012114544v1 C 0 I 5 s calJac3.chr3 129383984 41 - 190850796 agatttaa---gtt---ttattataaacaatcctag-----------------aaa--------aaaaaacc i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6467775 49 - 25294431 aaatttaa---gtt---ttattataaacaatcctag-----------------aaaacaaaaacaaaaaccc i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4023590 44 - 6311556 agatttaa---gtt---ttattataaacgatcctag-----------------aaa-----aaaaaaaaccc i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14876699 47 + 15034901 agatttaa---gtt---ttattattaacaatcctag-----------------aag--aaaaaaaaaaacct i aotNan1.NW_018507635v1 C 0 I 1 s otoGar3.GL873702 899334 40 - 3201129 aaatttaggatgtt---ttacaataaacaatcttag-----------------ggg--------aaaa---- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43994150 40 - 53741614 gattttag---gtttggttaccataagtaatcctag-----------------aag--------taaa---- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26285184 337 - 93316391 I e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 861307 2005 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=20955.000000 s hg38.chr9_KI270719v1_random 2501 2 + 176845 ca s panTro5.chr4 135029662 2 + 194502333 ca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 10363 2 - 70559 ca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90423593 2 - 115148730 ta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366016 2 + 190429646 ca i rheMac8.chr5 I 5 C 0 s macFas5.chr5 130884767 2 + 189454096 ca i macFas5.chr5 I 5 C 0 s macNem1.NW_012010911v1 34876036 2 - 40319822 ca i macNem1.NW_012010911v1 I 5 C 0 s cerAty1.NW_012000798v1 4430228 2 - 9219162 ca i cerAty1.NW_012000798v1 I 5 C 0 s chlSab2.chr7 78955515 2 + 135778131 CA i chlSab2.chr7 I 5 C 0 s manLeu1.NW_012103277v1 2721873 2 - 3013352 ca i manLeu1.NW_012103277v1 I 5 C 0 s colAng1.NW_012114544v1 5953310 2 + 8656713 ca i colAng1.NW_012114544v1 I 5 C 0 s rhiRox1.KN298694v1 863312 2 - 935421 ca i rhiRox1.KN298694v1 I 2005 I 573 s calJac3.chr3 129384026 2 - 190850796 ca i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6467825 2 - 25294431 ca i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4023635 2 - 6311556 ca i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14876747 2 + 15034901 ca i aotNan1.NW_018507635v1 I 1 C 0 e micMur3.chr14 26285184 337 - 93316391 I e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43994190 0 - 53741614 C e otoGar3.GL873702 899374 0 - 3201129 C a score=2792362.000000 s hg38.chr9_KI270719v1_random 2503 279 + 176845 gcacatacattcttctaaaagcattctgtaggtaagatattcctccctggaaacttcttagtttgtttgccaagagg-ttagccagttatatggttaccaaaaaacctgcctt----ctttgtctccagcatgtttcttattaaagagaatgaatgaattgcagaactattgtttgcacatttacttTT-AAATGGTTTATCAGTAAAATATGT-GAGAATACATTTTTAAAATGAACTtatgtgattgctttggaaaatgtctggaaatacgcaaaccacactga s panTro5.chr4 135029664 280 + 194502333 gcacatacattcttctaaaagcattctgtaggtaagatattccttcctggaaacttcttagttcgtttgccaagagggttagctggttgtatggttaccaaaaaacctgcctt----ctttgtctccagcatgtttcttattaaagagaatgaatgaattgcagaactattgtttgcacatttacttTT-AAATGGTTTATCAGTAAAATATGT-GAGAATACATTTTTAAAATAAACTtatgtgattgctttggaaaatgtctggaaatacgcaaaccacactga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 10365 279 - 70559 gcacatacattcctctaaaagcattctgtaggtaagatattccttcctggaaacttcttagtttgtttgccaagagg-ttagccagttatatggttaccaaaaaacctgcctt----ctttgtctccagcatgtttcttattaaagagaatgaatgaattgcagaactattgtttgcacatttacttTT-AAATGGTTTATCAGTAAAATATGT-GAGAATACATTTTTAAAATAAACTtatgtgattgctttggaaaatgtctggaaatacgcaaaccacactga i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90423595 278 - 115148730 acacatacattcttctaaaagcatcctgtaggtaagatattccttcctggaaacttcttagtttgtttgccaagagg-ttagccagttgtatggttaccaaaaaacctgcctt----ctttgtctccagcatatttcttattaaagagaatgaatgaattgcagaactattgtttgcatatttacttTT-AAATGGTTTATCAGTAAAATATGT-GAGAATAC-TTTTTAAAATAAACTTATACGATtgctttggaaaatgtctggaaatacgcaaaccacactga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366018 279 + 190429646 acacatacattctgctaaaagcattctgtaggtaagatatttcttcctggaaacttattagtttgtttgccaagagg-ttagtcagtggtatgattaccaaaaaacctgcctt----ctttgtctccagcatggttcttattaaagagagtgaatgaattgcagaactcttgtttacacatttacttTT-AAATGGTTTATCAGTAAAATATGT-GAAAATACATATTTAAAATAAACTtatgtgattgctttggaaaatgtctggaaatatacaaaccacactga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130884769 279 + 189454096 acacatacattctgctgaaagcattctgtaggtaagatgtttcttcctggaaacttattagtttgtttgccaagagg-ttagtcagttgtatgattaccaaaaaacctgcctt----ctttgtctccagcatggttcttattaaagagagtgaatgaattgcagaactcttgtttacacatttacttTT-AAATGGTTTATCAGTAAAATATGT-GAAAATACATATTTAAAATAAACTtatgtgattgctttggaaaatgtctggaaatatacaaaccacactga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34876038 279 - 40319822 acacatacattctgctaaaagcattctgtaggtaagatatttcttcctggaaacttattagtttgtttgccaagagg-ttagtcagttgtatgattaccaaaaaacctgcctt----ctttgtctccagcatggttcttattaaagagagtgaatgaattgcagaactcttgtttacacatttacttTT-AAATGGTTTATCAGTAAAATATGT-GAAAATACATATTTAAAATAAACTtatgtgattgctttggaaaatgtctggaaatatacaaaccacactga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4430230 279 - 9219162 acacatacattctgctaaaagcattctgtaggtaagatatttcttcctggaaacttattagtttgtttgccaagagg-ttagtcagttgtatgattaccaaaaaacctgcctt----ctttgtctccagcatggttcttattaaagagagtgaatgaattgcagaactattgtttacacatttATTTTT-AAATGATTTATCAGTAAAATATGT-GAAAATACATATTTAAAATAAACTtatgtgattgctttggaaaatgtctggaaatatacaaaccacactga i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78955517 279 + 135778131 Acacatacattctgctaaaagcattctgtaggtaagatatttcttcctggaaacttattagtttgtttgccaagagg-ttagtcagttgtatgattaccaaaaaacctgcctt----ctttgtctccagcatggttcttattaaagagagtgaatgaattgcagaactattgtttacacatttacttTT-AAATGGTTTATCAGTAAAATATGT-GAAAATACATATTTAAAATAAACTtatgtgattgctttggaaaatgtctggaaatatacaaactacactaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2721875 279 - 3013352 acacatacattctgctaaaagcattctgtaggtaagatatttcttcctggaaacttattagtttgtttgccaagagg-ttagtcagttgtatgattaccaaaaaacctgcctt----ctttgtctccagcatggttcttattaaagagagtgaatgaattgcagaactattgtttacacatttATTTTT-AAATGATTTATCAGTAAAATACGT-GAAAATACATATTTAAAATAAACTtatgtgattgctttggaaaatgtctggaaatatacaaaccacactga i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5953312 279 + 8656713 acacaaacattctgctaaaaacattctgtaggtaagatatttcttcctggaaacttatcagtttgtttgccaagagg-ttagtcagttgtatgatcaccaaaaaacctgcctt----ctttgtctccagcatggttcttattaaagagagtgaatgaattgcagaactattgtttacacatttacttTT-AAATGGTTTATCAGTAAAATATGT-GAAAATACATATTTAAAATAAACTtatgagattgctttggaaaatgtctggaaatatacaaaccactctga i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129384028 279 - 190850796 acacatacattctgctaaaagcattctgtaggtaagatatttcttcctggaaacgtattagtttgtttgccaagagg-ttagacagttgtatgtttaccaaaaaatctgactt----ctttgtccccatcatgtttcttattaaggagagtgaatgaattgcagaactatcatttacacatttacttTT-AAATGATTTATCAGTAATATATGT-AAAAATACATTTTAAAAATAAACTTACATGATTGCTTTGGAAAATGTCTGAAAATATGTAAACCACACTGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6467827 280 - 25294431 acacgtacattctgctaaaagcattccgtaggtaagatatttcttcctggaaacttattagtttgtttgtcaagagg-ttagacagttgtatgtttaccaaaaagtctgcctt----ctttgtctccagcatgtttcttattaaagagagtgaatgaattgcagaactatcgtttacacatttacttTT-AAATGGTTTATCAGTAATATATGTAAAAAATACACTTTTAAAAGAAACTTACATGATTGCTTTGGAAAATATCTGAAAATATGTAAACCACACTGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4023637 279 - 6311556 acacatacattctgctaaaagcattctgtaggtaagatatttcttcctggaaacttattagtttgtttgacaagagg-ttagacagttgtatgtttaccaaaaagtctgcctt----ctttgtctccagcatgtttcttattaaagagagtgaatgaattgtagaactatcgtttacacatttacttTT-AAATGGTTTATCAGTAATATATGT-AAAAATACATTTTTAAAATAAACTTACATGATTGCTTTGGAAAATATCTGAAAATATGTGAACCACACTGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14876749 261 + 15034901 acacatacattctgctaaaagcattctgtaggtatgacgtttcttcctggaaacttattagtttgtttgccaagagg-ttagacagttgtatgtttaccagaaaatctgcctt----ctttgtctccagcatgtttcttattaaagagagtgaatgaattgcagaaccatcgtttacacatttacttTT-AAATGGTTTATCAGTAATATATGT-AAAAATACATTTTTAAAATAAACTTACATGATTGCTTTGGAA------------------AACCACACTGA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 899374 262 - 3201129 --aaataccttctggtgaaagcatttcagaggtaaagaatttccgcccaagaaatcattagtttgtttgctaggagg-tatgcaaggagtatgtttataaaaagaactgtctt----ctttgtcttcaatatgtttcttattaaagaaagcaaatgaattgcataactattgtttgtccatAAATTTTTCAGATAGTTTATAAATAAAACATGT-G----------------ATAAACTGACATGATTGCTTCGGAAAATGTATGGAAGTCTGCCTACCACATTCA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43994190 278 - 53741614 ---tacacattctgctcaacacattccagggtaagggaattccctcatggaaaatcaggagttaatttgccaggagg-tccgtcagtagcatatttacatagaaatctgccttcttcctttgtctccatcatgttccctcttacagggagtaaattaattgcagagctactgttta-gcatttactccccaGACGATTTATAAGCAAAATATGT-GATAGTGGTTGTTTC--ATAAACTTATGTGATCGCTTTGGAGAATGTCTAGAAGTATGTAAATAACAGTAA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26285184 337 - 93316391 I e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 863314 573 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=2514691.000000 s hg38.chr9_KI270719v1_random 2782 259 + 176845 taataatggccttctggggaTGAACCAACACACAATAGATTTACTGGTAATCGTTTG---ATTTTTTCAAAAGTACTACATTCCTGTATAATTTGCATGAT---TAAAATGTATTTAATATAATTTCCACCCGTGATAATTTTCTTGTGTATAAATAGGACATTGCTCTTGCTATTAGCAG--CTATATACTGTAATATTTCTAGTTGAACCAcagggtttagcagacttcagcccatatactgaacctgtcctattgcctg-ttttt s panTro5.chr4 135029944 259 + 194502333 taataatggccttctggggaTGAACCAACACACAATAGATTTACTGGTAATCGTTTG---ATTTTTTCAAAAGTAATACATTCCTGCATAACTTGCATGAT---TAAAATGTATTTAATATAATTTCCACCCGTGATAACTTTCTTGTGTATAAATAGGACATTGCTCTTGCTATTAGCAG--CTATATACTGTAATATTTATAGTTGAACCAcagggtttagcagacttcagcccatacactgaacctgtcctattgcctg-ttttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 10644 259 - 70559 taataatggccttctggggaTGAACCAACACACAATAGATTTACTGGTAATCGTTTG---ATTTTTTCAAAAGTACTACATTCCTGTATAACTTGCATGAT---TAAAATGTATTTAATATAATTTCCACCCGTGATAATTTTCTTGTGTATAAATAGGACATTGCTCTTGCTATTAGCAG--CTATATACTGTAATATTTATAGTTGAACCAcagggtttagcagacttcagcccatacactgaacctgtcctattgcctg-ttttt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90423873 257 - 115148730 taataatggccttctggggaTGAAACAACACACAACAGACCTACTGGTAATTGTTTG---ATTTTTTCGAAAGTACTACATTCCTGTATAACTTGCATGAT---TAAAGTGTATTTAATGTAACTTCCACCTGTGATAATTTTCTTGTGTATAAATAGGACGTCGCTCTTGCTATTAGCAG--CTATATACTGTAATATTTATAGTTGAACCACAggg-ttagcagacttcag-ccacacactgaaactgccctattgcctg-ttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366297 260 + 190429646 taataatggccttctggggaTGAACCAACGCACAATAGACTTACAGGTAATCGTTTG--CTTTTTTTCAAAAGTACTCAATTTCTGTATAATATGCATGGT---TAAAATGTATTTAATATAACTTCCACCTGTGATAATTTTCTTATGTATATGTAGGACACTGCTCTTGCTATTAGCAG--GTATATACTGTCATATTTATAGCTGAACCAcaggggttagcagactgtggcccatacactgaacctatcctattgcctg-ttttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130885048 260 + 189454096 taataatggccttctggggaTGAACCAACGCACAATAGACTTACAGGTAATCGTTTG--TTTTTTTTCAAAAGTACTCAATTTCTGTATAATATGCATGAT---TAAAATGTATTTAATATAACTTCCACCTGTGATAATTTTCTTATGTATATGTAGGACACTGCTCTTTCTATTAGCAG--GTATATACTGTCATATTTATAGCTGAACCAcaggggttagcagactgtggcccatacactgaacctatcctattgcctg-ttttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34876317 261 - 40319822 taataatggccttctggtgaTGAACCAATGCACAATAGACTTACAGGTAATCGTTTG-TTTTTTTTTCAAAAGTACTCTATTTCTGTATAATATGCATGAT---TAAAATGTATTTAATATAACTTCCACCTGTGATAATTTTCTTATGTATATGTAGGACACTGCTCTTGCTATTAGCAG--GTATATACTGTCATATTTATAGCTGAACCAcaggggttagcagactgtggcccattcactgaacctatcctattgcctg-ttttt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4430509 262 - 9219162 taataatggccttctggggaTGAACAAACACACAATAGACTTACTGGTAATCGTTTTTTTTTTTTTTCAAAAGTACTCAATTTCTGTATAATATGCATGAT---TAAAATGTATTTAATATAACTTCCACCTGTGATAATTTTCTTATGTATATGTAGGACACTGCTCTTGCTATTAGCAG--GTATATACTCTCATATTTATAGCTGAACCAcaggggttagcagactgtggcccatacactgaacctatcctattgcctg-ttttt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78955796 260 + 135778131 taataatggccttctggggaTGAACCAACACACAATAGACTTACCGGTAATCATTTG--GTTTTTTTCAAAAGTACTCAATTTCTGTATAACTTGCATGAT---TAAAATGTATTTAATATAACTTTCACCTGTGATAATTTTCTTATTTATATGTAGGACACTGCTCTTGCTATTAGCAG--GTATATACTGTCATATTTATAGCTGAACCAcaggggttagcagactgtggcccatacactgaacctatcctattgcctg-ttttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2722154 260 - 3013352 taataatggccttctggggaTGAACAAACACACAATAGACTTACTGGTAATCGTTTG--GTTTTTTTCAAAAGTACTCAATTTCTGTATAATATGCATGAT---TAAAATGTATTTAATATAACTTCCACCTGTGATAATTTTCTTATGTATATGTAGGACACTGCTCTTGCTATTAGCAG--GTATATACTGTCATATTTATAGCTGAACCAcaggggttagcagactgtggcccatacactgaacctatcctattgcctg-ttttt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5953591 259 + 8656713 taataatggccttctggggaTGAACCAACACACAATAGACTTACTGGT-ATCATTTG--GTTTTTTTCAAAAGTGCTCAATTTCTGTATAACTTGCATGAT---TAAAATGTATTTAATATAACTTCCACCTGTGATAATTTTCGTATGTATATGTAGGACACTGCTCTTGCTATTAGTAG--GTATATACTGTCATATTTACAGCTGAACCAcaggggttagcagactatggcccatacactgaacctatcctgttgcctg-ttttt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129384307 256 - 190850796 ATGAAATGGTCTTCTGGGGATGAGCCAATACACAATAGATTTACTGGAAATCATTTG--AATTTTTTTGAAGGTATTACATTTCTGTACTATATGCATGAT---TAAAATGTtgt-----taactgccacttgtgataattttcttgtgtatatgtaggacattgctcttgctattagcag--atatatactgaaatatttaTAGTTGAATCAcaggggttagcagactgtggcccatagactgaatctgtcctattgcctgtttttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468107 261 - 25294431 TAAAAATAGTCTTCTGGGGATGAACCAATACACAATAGATTTACTGGCAATTGTTTG--ATTTTTTTCAAAGGTACTACATTTCTGTACTATATGCGTGAT---TAAAATGTAGTTAACATAACTTCCACCTGTGATAATTTTCTTGCGTATATGTTGGGCATTGTTCTTGCTATTAGCAG--ATATATGCTGAAATATTTATAGTCGGATCAcagggattagcagactgtggaccatagactgaatctgtcctattgcctgtttttt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4023916 260 - 6311556 TAAAAATGGTCTTCTGGGGATGAACCAATACACAATAGATTTAATGGCAATCTTTTG--AATTTTTCCAAAGGTGCTATGTTTCTGTGTTATATGCGTGAT---TAAAATGTAGTTAACATAACTTCCACCTGtgataattttcttgtgtatatgtaagacattgttcttgctattagcag--atatatgctgaaatatttaTAGTTG-ATTAcagggactagcagactgtggcccatagactgaaattgtcctattgcctgtttttt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14877010 260 + 15034901 TAAAAG-GGTCTTCTGGGGCTGAACCAATACACAATAGATTTACTGGCAATCGTTTG--AATTTTTTCAAAGGTACTACATTTCTGTACTATATGTGTAAT---TAAAATGTAGTTAACATAACTTCCACCTGTGATAATTTTCTTGTGTATATGTAGGACATGGCTCTTGCTATTAGCAG--ATATATACTGAAATATTTATAGTTGAATCAcaggcgttagcagactgtggcccatagactgaatctgtcctttcgcctgtttttt i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26285521 258 - 93316391 TAATGATGGTTGTCTGAGGATGAACTAACATACAATAGATTTATTTGTAA----TTG--ATTTTTTTT--GAGTACTACATTCTCATATTACTTGCACAAT-TTAAAAATGCATTTAATATAATTGTCACATGTGATAATTGTATTGTGTATATGTAGGACATTGCTTTTGCTATTAGGAGATATATATATAGTAATATTTATAGTTGAATCAcagggatctgcagactgcatcccatacagtgaatctgtccttctgcctg-ttttt i micMur3.chr14 I 337 I 344 s otoGar3.GL873702 899636 258 - 3201129 CAATGCCTGTTGTCCTGGGATGAACTAACACATACTGGATTTATTTGTAG----TTG--ATGTTTTTCAAGAATACTACATTCCTGCATTACTTGCATATTAAAAAAAATGCATTTAATATAATTTTCACATGtgataattgtattgtgcatatgtaggagattgttctagctgttaggaa--ataaataaagcagtatttaTAAGTGAACTGCAGTGGTCTCCAGACTGCAGCCTGTACACTGAATCTGTCCTGTT-CTTG-TTGTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43994468 241 - 53741614 -------------TTGGGACCGATCTAACACATTATAGTGCCACTTAGACTTCTTTG---ATTTTTTTAAGGATAATACACCCCTGTATTATTTGCATAAT---TAACATATATTTAATACAATGTCCACATGtaataatcatagtgtgttaatgtaggacattgcccttgcttttaggag--acatacccagtagtattttcaggt-aagcataggggtcatcatgctgctgcccatcc----aatctgccctattgccta-ttctt i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 863314 573 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=111124.000000 s hg38.chr9_KI270719v1_random 3041 11 + 176845 gtacaacctgc s panTro5.chr4 135030203 11 + 194502333 gtacaacctgc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 10903 11 - 70559 gtacaacctgc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424130 11 - 115148730 gtacaacctgc i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 131366557 11 + 190429646 gtacaacctgc i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130885308 11 + 189454096 gtacaacctgc i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34876578 11 - 40319822 gtacaacctgc i macNem1.NW_012010911v1 C 0 I 1 s cerAty1.NW_012000798v1 4430771 11 - 9219162 gtacaacctgc i cerAty1.NW_012000798v1 C 0 I 1 s chlSab2.chr7 78956056 11 + 135778131 gtacaacctgc i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012103277v1 2722414 11 - 3013352 gtacaacctgc i manLeu1.NW_012103277v1 C 0 I 1 s colAng1.NW_012114544v1 5953850 11 + 8656713 gtacaacctgc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129384563 11 - 190850796 gtacaactttc i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6468368 11 - 25294431 gtacaaccttc i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4024176 11 - 6311556 gtacaaccatc i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14877270 11 + 15034901 gtacaaccttc i aotNan1.NW_018507635v1 C 0 I 1 s otoGar3.GL873702 899894 11 - 3201129 ATACAGCCTAT i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 43994709 11 - 53741614 gtaccaccatc i canFam3.chr19 C 0 I 1 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118942764 2564 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 863314 573 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=15561.000000 s hg38.chr9_KI270719v1_random 3052 1 + 176845 a s panTro5.chr4 135030214 1 + 194502333 a i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 10914 1 - 70559 a i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424142 1 - 115148730 a i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 131366569 1 + 190429646 a i rheMac8.chr5 I 1 C 0 s macFas5.chr5 130885320 1 + 189454096 a i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34876590 1 - 40319822 a i macNem1.NW_012010911v1 I 1 C 0 s cerAty1.NW_012000798v1 4430783 1 - 9219162 a i cerAty1.NW_012000798v1 I 1 C 0 s chlSab2.chr7 78956068 1 + 135778131 a i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012103277v1 2722426 1 - 3013352 a i manLeu1.NW_012103277v1 I 1 C 0 s nasLar1.chr5 118945328 1 + 174288623 a i nasLar1.chr5 I 2564 I 312 s colAng1.NW_012114544v1 5953861 1 + 8656713 a i colAng1.NW_012114544v1 C 0 I 1 s rhiRox1.KN298694v1 863887 1 - 935421 a i rhiRox1.KN298694v1 I 573 I 312 s calJac3.chr3 129384575 1 - 190850796 a i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6468380 1 - 25294431 a i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4024188 1 - 6311556 a i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14877282 1 + 15034901 a i aotNan1.NW_018507635v1 I 1 C 0 s otoGar3.GL873702 899906 1 - 3201129 A i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 43994721 1 - 53741614 a i canFam3.chr19 I 1 C 0 e micMur3.chr14 26285779 344 - 93316391 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=302630.000000 s hg38.chr9_KI270719v1_random 3053 35 + 176845 gctaagaatg-tttttatattttttga-ataatacaa s panTro5.chr4 135030215 36 + 194502333 gctaagaatactttttatattttttga-ataatacaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 10915 35 - 70559 gctaagaatg-tttttatattttttga-ataatacaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424143 35 - 115148730 gctaagaatg-tttttacattttttga-ataatacaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366570 35 + 190429646 gctaagaata-tttttacatttcttga-ataatacaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130885321 35 + 189454096 gctaagaata-tttttacatttcttga-ataatacaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34876591 35 - 40319822 gctaagaata-tttttacatttcttga-ataatacaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4430784 35 - 9219162 gctaagaata-tttttgcatttcttga-ataatacaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956069 35 + 135778131 gttaagaata-tttttacatttcttga-ataatacaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2722427 35 - 3013352 gctaagaata-tttttacatttcttga-ataatacaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5953863 35 + 8656713 gctaagaata-tttttacatttcttga-ataatacaa i colAng1.NW_012114544v1 I 1 C 0 s calJac3.chr3 129384576 35 - 190850796 gctaagaatg-tttttaaattttttga-acaatagaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468381 35 - 25294431 gcaaagactg-ttttaaaatattttga-acaatagaa i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024189 35 - 6311556 gctaacaatg-tttttaaattttttgt-acaatagga i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14877283 35 + 15034901 gctaagaatg-tttttaaattttttga-acaatataa i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 899907 36 - 3201129 GCCAACAATA-TTTTCTTACATTTTAAGGTAATAAAA i otoGar3.GL873702 C 0 I 4740 s canFam3.chr19 43994722 35 - 53741614 gctaagaatc-ctttttacatttttaa-gtagttgaa i canFam3.chr19 C 0 C 0 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945329 312 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 863888 312 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=1982986.000000 s hg38.chr9_KI270719v1_random 3088 239 + 176845 aaatatcaacagaagaatagtagtccgtaaca---caaaattaacaaaatataacatttgtgtctatgaataaagttgataatattgtagccacagccatttgtttgcatattgt------ctactttcttgttac--aacagggtttagcagttgtggcagagacttctacaatgttcccaaagcctaaaatatttactgtcttaccctttataga---aataaatactttgctgacACT---GTGACTCATAAT s panTro5.chr4 135030251 239 + 194502333 aaatatcaacagaagaataatagtttgtaaca---caaaattaacaaaatttaacatttgtgtctatgaataacattgataatattgtagccacatccatttgtttgcatattgt------ctactttcttgttac--aacagggttcagcagttgtgacagagacttctacaatgttcccaaagcctaaaatatttactgtcttgccctttataga---aataaatactttgctgacACT---GTGACTCATAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 10950 237 - 70559 aaatatcaacagaagaataatagttcgtaaca---caaaattaacaaaatttaacatttgtgtctatgaataaagttgataatattgtagccacagccatttgtttgcatattgt------ctactttcttgttac--aacagggtttagcagttgtgacagagacttctacaatgttcccaaagcctaaaatatttactgtcttaccctttataga---aataaatactttgctgacACT---GTGACT-AT-AT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424178 239 - 115148730 aaatatcagcagaagaataatagttcataaca---taaaattaacaaaatttaacatttgtgtctatgaataaagctgataatatcatagccacatccatttgcttgcatattgt------ctactttcttgttac--aacagggtttagtagttgtgacagagacttctacaaggttcccaaagcctaaaatatttactgtcttgccctttataga---aataaatactttgctgacACT---GTGCCTCTTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366605 234 + 190429646 aaatatcaacagcagaataatagttcataaca---tgaaattaacaacatttaacatttgtgtctatgaataaagttgataatatcgtagccacatccttttatttgtatattgt------ctactttcatgttac--aacagggtttagtagttgtga-----acttctacaaggttcccaaagcctaaaatatttactgtcttgccctttataga---aataaataatttgctgacACT---GTGACTCATAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130885356 234 + 189454096 aaatatcaacagcagaataatagttcataaca---tgaaattaacaacatttaacatttgtgtctatgaataaagttgataatatcgtagccacatccttttatttgtatattgt------ctactttcatgttac--aacagggtttagtagttgtga-----acttctacaaggttcccaaagcctaaaatatttactgtcttgccctttataga---aataaataatttgctgacACT---GTGACTCATAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34876626 231 - 40319822 aaatatcaacagcagaataatagttcataaca---tgaaatt---aacatttaagatttgtgtctatgaataaagttcataatatcgtagccacatccttttatttgtatattgt------ctactttcatgttac--aacagggtttagtagttgtga-----acttctacaaggttcccaaagcctaaaatatttactgtcttgccctttataga---aataaataatttgctgacACT---GTGACTCATAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4430819 234 - 9219162 aaatatcaacagcagaataatagttcataaca---taaaattaacaacatttaacatttgtgtctatgaataaagttgataatatcgtagccacatccttttgtttgtatattgt------ctactttcatgttac--aacagggtttagtagttgtga-----acttctacaaggttcccaaagcctaaaatatttactgtcttgccctctataga---aaTAAATAATTTACTGACACT---GTGACTCATAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956104 234 + 135778131 aaatatcaacagcagaataatagttcataaca---taaaattaacaacatttaacatttgtgtctatgaataaagttgataatatcgtagccatatccatttgtttgcatattgt------ctactttcatgttac--aacagggtttagtagttgtga-----acttctacaaggttcccaaagcctaaaatatttactgtcttgccctttataga---aataaataatttgctgacACT---GTGACTCATAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2722462 234 - 3013352 aaatatcaacagcagaataatagttcataaca---taaaattaacaacatttaacatttgtgtctatgaataaagttgataatatcgtagccacatccttttgtttgtatattgt------ctactttcatgttac--aacagggtttagtagttgtga-----acttctacaagattcccaaagcctaaaatatttactgtcttgccctttataga---aataaataatttgctgacACT---GTGACTCATAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5953898 234 + 8656713 aaatatcaacagcagaataatagttcataaca---taaaattaacaacatttaacatttgtgtctatgaataaagttgataatatcgtagccacatccatttgtttgcatattgt------ctactttcatgttac--aacaaggtttagtagttgtga-----acttctacaagattcccaaagcctaaaatatttactgtcttgcccttcataga---aataaatagtttgctgacACT---GTGACTCATAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129384611 236 - 190850796 aaatatcaacagaagaataatagttcataaga---taaagttagcaaaatttaacatttgtgtccaagaataaagt--ataatattgttaccacgtccattcgtttgcatattgt------gtactttcatgttac--aacagggtttagtagttgtgacagagacttctataaggttcccaaagcc-aaagtatttactgtcttgccgtttataga---aaTAAATAATTTACTGACATT---GTGAGTCATAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468416 232 - 25294431 aaatatcaacaggagaataatagttcataaga---taaagttaacaaaatttaacatttgtgtctaagaataaagt--ataatattgtagccacatccatttgtttgcagattgt------ctacttttgtgttac--aacagggtttagtagttgtgacagagatttctataaggttcccaaagcc-aaaatatttactgtcttgccttttatag-------aaatactttactgaTATT---GTGAGTTATGAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024224 236 - 6311556 aaatatcaacagaagaataacagttcataaga---taaagttaacaaaacttaacatttgtgtctaagaataaagt--ataatattgtagccacatccatttgtttgcatattgc------ctactttcgtgttac--aacagggtttagtagttgtgacagagactttaataaggttcccaaagcc-aaaatatttactgtcttgccctttataga---aaTAAATAATTTACTGACATT---GTGAGTCATAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14877318 233 + 15034901 aaatatcaac---agaataatagttcataaga---taaagttaacaaaatttaacatttgtgtccatgaataaagt--ataatattgtagccacaaccatatgtttgcatattgt------ctactttcgtgttac--aacagcgtttggtagttgtgacagagacttctataaggttcccaaagcc-aaaatatttactctcttgctctttataga---aaTAAATAATTTACTGACATT---GTGAGTCATAAT i aotNan1.NW_018507635v1 C 0 I 195 s canFam3.chr19 43994757 230 - 53741614 aaaaatggatagaaaaatcatatcttatgacacatcagaattacatgaaactagcttt--------------------attatatcatagccaaacccatttatttatgtattgtctggggctgcttttgtgtttcttacaagaatttagtagttgtgacaaagactac-acaaggctcacaaagtcttaaata--taccaccttgccctttggtaagatagtaaataatttgttgacccttgggtgaatcat--- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945329 312 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 863888 312 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e otoGar3.GL873702 899943 4740 - 3201129 I a score=170687.000000 s hg38.chr9_KI270719v1_random 3327 30 + 176845 AATGTTTGCAACTACTTTTTGAATAAG----CTC s panTro5.chr4 135030490 30 + 194502333 AATGTTTGCAACTACTTTTTGAATAAG----CTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11187 30 - 70559 AATGTTTGCAACTACTTTTTGAATAAG----CTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424417 30 - 115148730 AATGTTTGCAACTACTTTTTGAATAAG----CTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366839 30 + 190429646 AATGTTTACAACTACTTTTTGAATAAA----TTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130885590 30 + 189454096 AATGTTTACAACTACTTTTTGAATAAA----TTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34876857 30 - 40319822 AATGTTTACAACTACTTTTTGAATAAA----TTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431053 30 - 9219162 AATGTTTACAACTACTTTTTGAATAAA----TTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956338 30 + 135778131 AATGTTTACAACTACTTTTTGAATAAA----TTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2722696 30 - 3013352 AATGTTTACAACTACTTTTTGAATAAA----TTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954132 30 + 8656713 AATGTTTACAACTACTTTTTGAATAAA----TTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129384847 29 - 190850796 AATTTT----ACTACTTATTC-AAAACAACTTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468648 30 - 25294431 AATGTT----ACTACTTATTCAAAAACTACTTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024460 30 - 6311556 AATGTT----ACTACTTATTAAAAAAATACTTTC i cebCap1.NW_016107420v1 C 0 C 0 s canFam3.chr19 43994987 30 - 53741614 catgtttacaGGTAATTTTTGAATCAG----GTC i canFam3.chr19 C 0 C 0 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945329 312 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 863888 312 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e otoGar3.GL873702 899943 4740 - 3201129 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I a score=40052.000000 s hg38.chr9_KI270719v1_random 3357 14 + 176845 AGAAGTTT--------------AC--------AG--AC s panTro5.chr4 135030520 22 + 194502333 AAAAGTTT--------------ACGCACACACAG--AC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11217 22 - 70559 AAAAGTTT--------------acacacacacag--ac i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424447 24 - 115148730 ATAAGTTT--------------acacacacacagacac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366869 14 + 190429646 AAAAGTTT--------------ATacac---------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130885620 14 + 189454096 AAAAGTTT--------------acacac---------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34876887 14 - 40319822 AAAAGTTT--------------acacac---------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431083 28 - 9219162 AAAAGTTTacacacacacacacacacac---------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956368 14 + 135778131 AAAAGTTT--------------ACACAC---------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2722726 14 - 3013352 AAAAGTTT--------------acacac---------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954162 14 + 8656713 AAAAGTTT--------------acacac---------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129384876 16 - 190850796 AAAAGTTT------------ACACACAC---------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468678 28 - 25294431 AAAAATTTacgcacacacacacacacac---------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024490 14 - 6311556 AAAAGTTT--------------ACACAC---------- i cebCap1.NW_016107420v1 C 0 C 0 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945329 312 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e rhiRox1.KN298694v1 863888 312 - 935421 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43995017 0 - 53741614 C e otoGar3.GL873702 899943 4740 - 3201129 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I a score=10920.000000 s hg38.chr9_KI270719v1_random 3371 1 + 176845 A s panTro5.chr4 135030542 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11239 1 - 70559 a i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424471 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366883 1 + 190429646 a i rheMac8.chr5 C 0 I 10 s macFas5.chr5 130885634 1 + 189454096 a i macFas5.chr5 C 0 I 10 s macNem1.NW_012010911v1 34876901 1 - 40319822 a i macNem1.NW_012010911v1 C 0 I 10 s cerAty1.NW_012000798v1 4431111 1 - 9219162 a i cerAty1.NW_012000798v1 C 0 I 10 s chlSab2.chr7 78956382 1 + 135778131 A i chlSab2.chr7 C 0 I 4 s manLeu1.NW_012103277v1 2722740 1 - 3013352 a i manLeu1.NW_012103277v1 C 0 I 12 s nasLar1.chr5 118945641 1 + 174288623 a i nasLar1.chr5 I 312 I 17469 s colAng1.NW_012114544v1 5954176 1 + 8656713 a i colAng1.NW_012114544v1 C 0 I 14 s rhiRox1.KN298694v1 864200 1 - 935421 a i rhiRox1.KN298694v1 I 312 N 0 s calJac3.chr3 129384892 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468706 1 - 25294431 a i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024504 1 - 6311556 A i cebCap1.NW_016107420v1 C 0 C 0 e micMur3.chr14 26285779 344 - 93316391 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43995017 0 - 53741614 C e otoGar3.GL873702 899943 4740 - 3201129 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I a score=560295.000000 s hg38.chr9_KI270719v1_random 3372 79 + 176845 CACACTcctaaaatatt-----tgttatattgctctttatagaaataatttgcttatccctgTGAATTATAGTGATGTATACAA s panTro5.chr4 135030543 79 + 194502333 CACACTcctaaaatatt-----tgttatattgctctttatagaaataatttgcttatccctgTGAATTATAGTGATGTCTACAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11240 79 - 70559 cacacTcctaaaatatt-----tgttatattgctctttatagaaataatttgcttatccctgTGAATTATAGTGATGTATACAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424472 79 - 115148730 cacacTcctaaaatatt-----tgttatattgctctttatagaaataatttgctgatccctgTGAATTATAGTGATGTATACAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366894 84 + 190429646 cacacTcctaaaatacttatcttgctatcttgctctttatagaaataatttgcttatccctgTGAATTATAGTGATGTTTACAA i rheMac8.chr5 I 10 C 0 s macFas5.chr5 130885645 84 + 189454096 cacacTCCTAAAATACTTATCTTGCTATCTTGCTCTTTATAGAAACAATTTGCTTATCCCTGTGAATTATAGTGATGTTTACAA i macFas5.chr5 I 10 C 0 s macNem1.NW_012010911v1 34876912 84 - 40319822 cacacTcctaaaatacttatcttgctatcttgctctttatagaaataatttgcttatccctgTGAATTATAGTGATGTTTACAA i macNem1.NW_012010911v1 I 10 C 0 s cerAty1.NW_012000798v1 4431122 76 - 9219162 cacacTCCTAAAATACT--------TATCTTGCTCTTTATAGAAATAATTTGCTTATCCCTGTGAATTATAGTGATGTTTACAA i cerAty1.NW_012000798v1 I 10 C 0 s chlSab2.chr7 78956387 76 + 135778131 CACACTCCTAAAATATT--------TATCTTGCTCTTTATAGAAATAATTTGCTTATCCCTGTGAATTATAGTGATGTTTACAA i chlSab2.chr7 I 4 C 0 s manLeu1.NW_012103277v1 2722753 76 - 3013352 cacacTCCTAAAATACT--------TATCTTGCTCTTTATAGAAATAATTTGCTTATCCCTGTGAATTATAGTGATGTTTACAA i manLeu1.NW_012103277v1 I 12 C 0 s colAng1.NW_012114544v1 5954191 76 + 8656713 cacacTcctaaaatatt--------tatcttgctctttatagaaataatttgcttatccctgTGAATTATAGTGATGTGTACAA i colAng1.NW_012114544v1 I 14 C 0 s calJac3.chr3 129384893 79 - 190850796 CACACTcctaaaatatt-----tgctatcttggcctttatagaaataatttgcttacccttgTGAATTATAGTGATGATTACAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468707 78 - 25294431 cacacTTctaaaatatt-----tgctgtcttgctctttacagaaataatttgcttacccctgTGAATTATA-TGATGCTTACAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024505 79 - 6311556 CACACTcctaaaatatt-----tgacatcttgccctttatacaaataatttgcttacccctgTGAATTATAGTGATGTTTACAA i cebCap1.NW_016107420v1 C 0 I 65 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43995017 0 - 53741614 C e otoGar3.GL873702 899943 4740 - 3201129 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I a score=158707.000000 s hg38.chr9_KI270719v1_random 3451 27 + 176845 ---------------------------CTGATTTTTGAATAAGTTAAAAAATTT s panTro5.chr4 135030622 27 + 194502333 ---------------------------CTGATTTTTGAATAAGTTAAAAAATTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11319 27 - 70559 ---------------------------CTGATTTTTGAATAAGTTAAAAAATTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424551 27 - 115148730 ---------------------------CTGATTTTTGAATAAGTTAAAAAATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131366978 27 + 190429646 ---------------------------CTGATTTTTGAATAAGTTAAAAAATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130885729 27 + 189454096 ---------------------------CTGATTTTTGAATAAGTTaaaaaattt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34876996 27 - 40319822 ---------------------------CTGATTTTTGAATAAGTTAAAAAATTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431198 27 - 9219162 ---------------------------CTGATTTTTGAATAAGTTAAAAAATTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956463 27 + 135778131 ---------------------------CTGATTTTTGAATAAGTTGAAAAATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2722829 27 - 3013352 ---------------------------CTGATTTTTGAATAAGTTAAAAAATTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954267 27 + 8656713 ---------------------------CTGATTTTTGAATAAGTTAAAAAATTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129384972 54 - 190850796 TGACTACGATCATTGATATATGCAACTATAATTTTTGAATAAGTTAAAATAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468785 54 - 25294431 TGACTACAGTCATTGATGTATGCATTTATAATTTTTGAGTAAGTTAAAATAGTT i saiBol1.JH378129 C 0 C 0 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43995017 0 - 53741614 C e otoGar3.GL873702 899943 4740 - 3201129 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I e cebCap1.NW_016107420v1 4024584 65 - 6311556 I a score=1315673.000000 s hg38.chr9_KI270719v1_random 3478 291 + 176845 Agctgggg-cggtgcctcacacctgtaatcccagcactttgggaggctgaggcaggcagatcacctgaggtcgggagttcaagaccagcctgaccaatgtggagaaacccagtctctactaaaaatacaaaattagctgggtgtggtggcgcatgcctgtaatctcagctactcgggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttacagtgagccgagattgcaccattgcactccagcctgggcaacaagagcgaaactcagtctcaaaaaaaaaa s panTro5.chr4 135030649 288 + 194502333 Agctgggg-cggtggctcacacctgtaataccagcactttgggaggctgaggagggcagatcacctgaggtcgggagttcaagaccagcctgaccaatgtggagaaacct-gtctctactaaaaatacaaaattagctgggtgtggtggcgcatgcctgtaatctcagctactcgggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttacagtgagccgagattgcaccattgtactccagcctgggcaacgagagtgaaact--gtctcgaaaaaaaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11346 290 - 70559 Agctgggg-cggtggctcacacctgtaatcccagcactttgggaggctgaggcgggcagatcacctgaggtcgggagttcaagaccagcctgaccaatgtggagaaacccagtctctactaaaaatacaaaattagctgggtgtggtgg-gcatgcctgtcatctcagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttacagtgagccaagattgcaccattgcactccagcctgggcaacaagagcgaaactcagtctcaaaaaaaaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424578 291 - 115148730 Agctgggg-cagtggctcacacctgtaataccatcactttgggaggctgaggtgggcagatcacctgaagtcgggagttcgagaccagcctgaccaatgtggagaaagccagtctctactaaaaatacataattagctgggagtcgtggcgcatacctgtaatctcagctactcgggaggctgaggcaggagaatcccttgaacctgggaggtgcaggttacagtaagctgagattgcaccattgcactccagcctgggcaacgagagtgaaactcagtctcaGaaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367005 292 + 190429646 Agctggggacagtgactcattcctgtaataccagcactttaagaggctgaggcgggcagatcatctgaggtcaggagtttgagacaagcctgaccaatgtggagaaacccagtctctactaaaaatacaaagttagctgggtgtggtggagcatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaatccgggaggtggaggttacagtgagccgagattgcaccattgcactccagctggggcgacaagagcgaaactcagtcacaaaaaaaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130885756 292 + 189454096 agctggggacagtgactcattcctgtaataccagcactttaggaggctgaggcgggcagatcatctgaggtcaggagtttgagacaagcctgaccaatgtggagaaacccagtctctactaaaaatacaaagttagctgggtgtggtggagcatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaatccgggaggtggaggttacagtgagccgagattgcaccattgcactccagctggggcgacaagagcgaaactcagtctcaaaaaaaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877023 292 - 40319822 Agctggggacagtgactcattcctgtaataccagcactttaggaggctgaggcgggcagatcatctgaggtcaggagtttgagacaagcctgaccaatgtggagaaacccagtctctactaaaaatacaaagttagctgggtgtggtggagcatgcctgtaatcccagctactcgggagaatgaggcaggagaattgcttgaatccgggaggtggaggttacagtgagccgagattgcaccattgcactccagctggggcgacaagagcgaaactcagtctcaaaaaaaaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431225 292 - 9219162 Agctggggacagtgactcattcctgtaataccagcaccttaggaggctgaggcgggcagatcatctgatgtcaggagtttgagacaagcctgaccaatgtggagaaacccagtctctactaaaaatacaaagttagctgggtgtggtggagcatgcctgtaatcccagctactcgggaggctgaggcaggagaactgcttgaatccgggaggtggaggttacagtgagccgagattgcaccattgcactccagccggggcgacaagagcgaaactcagtctcaaaaaaaaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956490 286 + 135778131 Agctggggacagtgactcactcttgtaataccagcactttaggaggctgaggtggtcagatcatctgagatcagcagttcgagacaagcctgaccaacgtggagaaacccagtctctactaaaaatacaaagttagctgggtgtggtggagcatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaatccgggaggtggaggttacagtgagccgagattgcaccattgcactctagccggggagacaagagcgaaactcagtctc------aaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2722856 292 - 3013352 Agctggggacagtgactcattcctgtaataccagcactttaggaggctgaggcgggcagatcatctgaggtcaggagtttgagacaagcctgaccaatgtggagaaacccagtctctactaaaaatacaaagttagctgggtgtggtggagcacgcctgtaatcccagctactcgggaggctgaggcaggagaactgcttgaatccgggaggtggaggttacagtgagccaagattgcaccattgcactccagccggggcgacaagagcgaaactcagtctcagaaaaaaaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954294 282 + 8656713 Agctgggagcagtgactcactcctgtaataccagcactttaggagtctgaggcgggcagatcatctgaggtcaggggttcgagacaagcctgaccaacgtggagaaatccagtctctactaaaaatacaaagttagctgggtgtggtggagcatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaatccaggagatggaggttacagtgagctgagattgcactattgcactccagccggggcgacaagagcgaaactcagtctc---------- i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43995017 0 - 53741614 C e otoGar3.GL873702 899943 4740 - 3201129 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I e cebCap1.NW_016107420v1 4024584 65 - 6311556 I e saiBol1.JH378129 6468839 0 - 25294431 C e calJac3.chr3 129385026 0 - 190850796 C a score=11957.000000 s hg38.chr9_KI270719v1_random 3769 3 + 176845 aaa- s panTro5.chr4 135030937 3 + 194502333 aaa- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11636 3 - 70559 aaa- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424869 3 - 115148730 aaa- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367297 3 + 190429646 aaa- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886048 3 + 189454096 aaa- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877315 3 - 40319822 aaa- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431517 3 - 9219162 aaa- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956776 3 + 135778131 aaa- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723148 3 - 3013352 aaa- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954576 3 + 8656713 aaa- i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 43995017 3 - 53741614 -AAC i canFam3.chr19 C 0 C 0 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e otoGar3.GL873702 899943 4740 - 3201129 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I e cebCap1.NW_016107420v1 4024584 65 - 6311556 I e saiBol1.JH378129 6468839 0 - 25294431 C e calJac3.chr3 129385026 0 - 190850796 C a score=56261.000000 s hg38.chr9_KI270719v1_random 3772 17 + 176845 a---------------------------------aaCTTTacacacacac s panTro5.chr4 135030940 14 + 194502333 a------------------------------------TTTACACACACAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11639 17 - 70559 a---------------------------------aaCTTTACACACACAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424872 38 - 115148730 aaagaaaaag------------aaaaagaaaaagaaaTTTACACACACAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367300 50 + 190429646 aaaaaaaaaaaaaaaaaaaaaaaaaaaaGGAAAAAAATGTACACATACAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886051 50 + 189454096 aaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaaaaTGTACACATACAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877318 31 - 40319822 aagaaaaaaa-------------------gaaaaaaaTGTACACATACAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431520 31 - 9219162 aaaaaaaaag-------------------aaaaaaaaTGTACACATACAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956779 33 + 135778131 aaaaaaaaaa-----------------aggaaaaaaaTGTACACATACGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723151 33 - 3013352 aaaaaagaaa-----------------agaaaaaAAATGTACACATACAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954579 31 + 8656713 aaaaaaaaag-------------------aaaaaaaaTGTACACATACAC i colAng1.NW_012114544v1 C 0 C 0 s otoGar3.GL873702 904683 17 - 3201129 ---------------------------------AAATTTTTCACATATTC i otoGar3.GL873702 I 4740 C 0 s canFam3.chr19 43995020 17 - 53741614 ---------------------------------AAAGTTTacacacacac i canFam3.chr19 C 0 C 0 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I e cebCap1.NW_016107420v1 4024584 65 - 6311556 I e saiBol1.JH378129 6468839 0 - 25294431 C e calJac3.chr3 129385026 0 - 190850796 C a score=41286.000000 s hg38.chr9_KI270719v1_random 3789 14 + 176845 acacaaacaTGGAT s panTro5.chr4 135030954 12 + 194502333 ACA--AACATGGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11656 11 - 70559 ACA--AAC-TGGAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424910 12 - 115148730 ACA--AACATGGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367350 14 + 190429646 ACTCAAACGCAGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886101 14 + 189454096 ACTCAAACGCAGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877349 14 - 40319822 ACTCAAACGCAGAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431551 14 - 9219162 ATTCAAATGCAGAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956812 14 + 135778131 ACACAAACGCAGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723184 14 - 3013352 ATTCAAACGCAGAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954610 14 + 8656713 ACACAAACGTAGAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385026 14 - 190850796 ACACAAACATGTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468839 14 - 25294431 ACACAAACATGGAT i saiBol1.JH378129 C 0 C 0 s otoGar3.GL873702 904700 5 - 3201129 ------ATACA--- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995037 14 - 53741614 acacacacacacac i canFam3.chr19 C 0 I 5 e micMur3.chr14 26285779 344 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I e cebCap1.NW_016107420v1 4024584 65 - 6311556 I a score=9090.000000 s hg38.chr9_KI270719v1_random 3803 1 + 176845 T s panTro5.chr4 135030966 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11667 1 - 70559 T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424922 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367364 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886115 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877363 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431565 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956826 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723198 1 - 3013352 T i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954624 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385040 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468853 1 - 25294431 T i saiBol1.JH378129 C 0 C 0 s micMur3.chr14 26286123 1 - 93316391 T i micMur3.chr14 I 344 C 0 s otoGar3.GL873702 904705 1 - 3201129 T i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995056 1 - 53741614 c i canFam3.chr19 I 5 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e aotNan1.NW_018507635v1 14877551 195 + 15034901 I e cebCap1.NW_016107420v1 4024584 65 - 6311556 I a score=7157.000000 s hg38.chr9_KI270719v1_random 3804 3 + 176845 ATG s panTro5.chr4 135030967 3 + 194502333 ATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11668 3 - 70559 ATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424923 3 - 115148730 ATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367365 3 + 190429646 ATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886116 3 + 189454096 ATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877364 3 - 40319822 ATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431566 3 - 9219162 ATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956827 3 + 135778131 ATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723199 3 - 3013352 ATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954625 3 + 8656713 ATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385041 1 - 190850796 A-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468854 1 - 25294431 A-- i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14877746 1 + 15034901 A-- i aotNan1.NW_018507635v1 I 195 I 2 s micMur3.chr14 26286124 3 - 93316391 ATG i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 904706 3 - 3201129 ATG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995057 3 - 53741614 CTG i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e cebCap1.NW_016107420v1 4024584 65 - 6311556 I a score=513045.000000 s hg38.chr9_KI270719v1_random 3807 48 + 176845 GATTGAGTTGCATGTATTTGAATATTAGTTTTGTTATTCTTGCAACTT s panTro5.chr4 135030970 48 + 194502333 GATTGAGTTGCATGTATTTGAATATTAGTTTTGTTATTCTTGCAACTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11671 48 - 70559 GATTGAGTTGCATGTATTTGAATATTAGTTTTGTTATTCTTGCAACTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424926 48 - 115148730 GGTTGAGTTGCATGTATTTGAATATTAGTTTTGTTATTCTTGCAACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367368 48 + 190429646 GATTACGTTGAATGTATTTGAATATTAGTTTTGTTATTCTTGCCACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886119 48 + 189454096 GATTACGTTGAATGTATTTGAATATTAGTTTTGTTATTCTTGCCACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877367 48 - 40319822 GATTACGTTGAATGTATTTGAATATTAGTTTTGTTATTCTTGCCACTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431569 46 - 9219162 GATTACGTTGAATGTATTTGAATATTAGTTTTGTTATTCTTGCCAC-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956830 48 + 135778131 GATTGAGTTGCACGTATTTGAATATTAGTTTTGTTATTCTTGCCACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723202 48 - 3013352 GATTACGTTGAATGTATTTGAATATTAGTTTTGTTATTCTTGCCACTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954628 48 + 8656713 GATTGAGTTGCATGTATTTGAATATTAGTTTTGTTATTCTTGCCACTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385042 43 - 190850796 -----AGCTGCATGTATCTGAATATTAGTTTTGTTATTCCTCCAACTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468855 43 - 25294431 -----AGTTGCATGTATCTGAATATTAGTTTTATTATTCTTGCAACCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024649 48 - 6311556 GATTAAGTTGCATGTATCTGAATATTAGTTTTGTTATTCTTGCAACTT i cebCap1.NW_016107420v1 I 65 C 0 s aotNan1.NW_018507635v1 14877749 48 + 15034901 GATTAAGTTGCATGTATCTGAATATTAGTTTTATTATTCTTGCAACTT i aotNan1.NW_018507635v1 I 2 C 0 s micMur3.chr14 26286127 48 - 93316391 GATTGAGTTTCAAGTATATGAATATTCATTTTGTTATTCTTGCAACTT i micMur3.chr14 C 0 I 188 s otoGar3.GL873702 904709 48 - 3201129 GATTGAGTTAATGGTATATAGGTATTCATTTTATTATTCTTATAACTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995060 48 - 53741614 GATTAAGTTACAAGTATATGGATGTTTATTTTATCATTCTTGCAACTT i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=902402.000000 s hg38.chr9_KI270719v1_random 3855 105 + 176845 ATTAGGGGGTTTGACACTTTTTCTAAATTACAATTGGGTGAAATTTTTGCAATTGATAAATTGCTAGATAACATAA--TCTAGCTCATATT--ATATGATAACTTTAGA- s panTro5.chr4 135031018 105 + 194502333 ATTAGGGGGTTTGACACTTTTTCTAAATTACAATTGGGTGAAATTTTTGCAATTGATAAATTGCTAGATAACATAA--TCTAGCTCATATT--ATATGATAACTTTAGA- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11719 105 - 70559 ATTAGGGGGTTTGACACTTTTTCTAAATTACAATTGGGTGAAATTTTTGCAATTGATAAATTGCTAGATAACATAA--TCTAGCTCATATT--ATATGATAACTTTAGA- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90424974 105 - 115148730 ATTAGGGGGTTTGACACTTTTTCTAAATTATAATTGGGCGAAATTTTTGCAATTGATAAATTGCCAGATAACATAA--TCTAGCTCATATT--ATATGATAACTTTAGA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367416 102 + 190429646 ATTACGGGATTTGACACTTTTTCTAAATTATAATTGGGTGAAATTTTTGCAATTGAAAAATTGCTACATAACATAA--TCTAGCTTATATT--AT---ATAACTTTCAA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886167 102 + 189454096 ATTACGGGATTTGACACTTTTTCTAAATTATAATTGGGTGAAATTTTTGCAATTGAAAAATTGCTACATAACATAA--TCTAGCTTATATT--AT---ATAACTTTCAA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877415 102 - 40319822 ATTACGGGATTTGACACTTTTTCTAAATTATAATTGGGTGAAATTTTTGCAATTGAAAAATTGCTACATAACATAA--TCTAGCTTATATT--AT---ATAACTTTCAA- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431615 102 - 9219162 ATTACGATATTTGACACTTTTTCTAAATTATAATTGGGTGAAATTTTTGCAATTGAAAAATTGCTACATAACATAA--TCTAGCTTATATT--AT---ATAACTTTCAA- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956878 102 + 135778131 ATTAGGGGATTTGACACTTTTTCTAAATTATAATTGGGTGAAATTTTTGCAATTGATACATTGTTACATAACATAA--TCTAGCTTATATT--AT---ATAACTTTCAA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723250 102 - 3013352 ATTATGAGATTTGACACTTTTTCTAAATTATAATTGGGTGAAATTTTTGCAATTGAAAAATTGCTACATAACATAA--TCTAGCTTATATT--AT---ATAACTTTCAA- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954676 102 + 8656713 ATTAGGGGATTTGACACTTTTTCTAAATTATAATTGGGTGAAATTTTTGCAATTGATAAATTGCTACATAACATAA--TCTAGCTTATATT--AT---ATAACTTTCAA- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385085 89 - 190850796 ---------------ACTTTTTCTAAATTATAATTGGTTGAAATTTCTGCAATTGATAAATTGCTAGATAACATAG--TCTAGCTCATATT--ATATGATAAC-TTTGA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6468898 106 - 25294431 ACTG-GGGATTTGACACTTTTTCTAAATTATAATTGGGTGAAATTTCTGCAACTGATAAATTGCTAGATAACATAGTATATAGCTCATATT--ATATAATAACTTTTGA- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024697 101 - 6311556 ACTG-GGGGTTTGACACTTTTTCTAAATTATAATTGGGTGAAATTTCTGCAATTGATAAATTGCTAGATAATATAG--TCTAGCTCATATT--AT---ATAACTTTTGA- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14877797 104 + 15034901 ACTA-GGGGTTTGATACTTTTTCTAAATTATAATTGGGTGAAATTTCTGCAATTCATAAATTGCCAGATAACATAG--TCTAGCTCATATT--ATATAATAACTTTTGA- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 904757 97 - 3201129 TTTAGGGTA--------TTTTAATAAGTTATAATTGGTGGAAATTTTTGCAACTGATAAATTTCTGGGTAACATTT--TCTTGTTCATATT--ATGTAGTAACTATTAG- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995108 105 - 53741614 TTCATATGATTTGACATATTTTCCAAATTGTAGTTGGAGAAGCTTTTTCTAACTTATAAATTACTAGATAATATGG--TCTTGCTTATAtttagt---gccgccttcagc i canFam3.chr19 C 0 I 104 e micMur3.chr14 26286175 188 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=247586.000000 s hg38.chr9_KI270719v1_random 3960 29 + 176845 TGTTAAATCAGTAATAAACCTTATGAAGA s panTro5.chr4 135031123 29 + 194502333 TGTTAAATAGGTAATAAACCTTATGAAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11824 29 - 70559 TGTTAAATCAGTAATAAACCTTATGAAGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425079 29 - 115148730 CGTGAAATCAGTAATAAACCTTATGGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367518 29 + 190429646 CGTTAAATCAGTAATAAACCTCATGAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886269 29 + 189454096 CGTTAAATCAGTAATAAACCTCATGAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877517 29 - 40319822 CGTTAAATCAGTAATAAACCTCATGAAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431717 29 - 9219162 CGTTAAATCAGTAATAAACCTCATGAAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78956980 29 + 135778131 CGTTAAATCAGTAATAAACCTCATGAAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723352 29 - 3013352 CGTTAAATCAGTAATAAACCTCATGAAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954778 29 + 8656713 CGTTAAATCAGTAATAAACCTCATGAAGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385174 29 - 190850796 TGTTAAATCAGTCATAAACATTATGAAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469004 29 - 25294431 TGTTAAATCAGTCATAAATGTTATGAAGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024798 29 - 6311556 TGTTAAATCAGTCATAAACATTTCGAAGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14877901 29 + 15034901 TGTTAAATCAGTCATAAACATTACGAAGA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 904854 28 - 3201129 TGATAAATCAAT-ACAAATCTTGTGAAAA i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26286175 188 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43995213 104 - 53741614 I a score=1152280.000000 s hg38.chr9_KI270719v1_random 3989 141 + 176845 --------------TCTATGTTTCTAGGAAACAATTACTTCAA----Caagaagggaaagtaaagacagaaggtaaaacaaaat----------ataagatgaaataaaataaagATGGGAATTGAATGCCATAGAAGTGTGG----AAGTTGGAAGGAAAGTTTC-TAAAATT s panTro5.chr4 135031152 141 + 194502333 --------------TCTATGTTTCTAGGAAATAATTACTTCAA----CAAGAAGGGAAAGTAAAGCCAGaaagtaaaacaaaat----------ataagacgaaataaaataaaGATGGGAATTGAATGCCATAGAAGTGTGG----AAGTTGGAGGGAAAGTTTC-TAAATTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11853 139 - 70559 --------------TCTATGTTTCTAGGAAATAATTACTTCAA----Caagaa-ggaaagtaaagacagaaggtaaaacaaaat----------ataagacgaaataaaataaaGATGGGAATTGAATGCCATAGAAGTGTGG----AAGTTGGA-GGAAAGTTTC-TAAAATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425108 141 - 115148730 --------------TCTCTGTTTCTAGGAAATAATTACTTCAA----Caagaagggaaagtaaagacaaaaagtaaaactaaat----------ataagataaaataaaataaagatGGGAATGGAATGCCATAGAAGTGTGG----AAGTTGGAGGGAAAGTTTC-TAAAACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367547 141 + 190429646 --------------TCTCTGTTTCTAGGAAATAATTAGTTCAA----Caagaagggaaagtaaagacagaaagtaaaacaaagt----------ataagacaaaataaaataaagATGGGAATGGAATTCTATAGAAGTGTGG----AAGTTGGAGGGAAAGTTTC-TAAAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886298 141 + 189454096 --------------TCTCTGTTTCTAGGAAATAATTAGTTCAA----Caagaagggaaagtaaagacagaaagtgaaacaaagt----------ataagacaaaataaaataaagATGGGAATGGAATTCTATAGAAGTGTGG----AAGTTGGAGGGAAAGTTTC-TAAAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877546 141 - 40319822 --------------TCTCTGTTTCTAGGAAATAATTAGTTCAA----Caagaagggaaagtaaagacagaaagtaaaacaaagc----------ataagacaaaataaaataaagATGGGAATGGAATTCTATAGAAGTGTGG----AAGTTGGAGGGAAAGTTTC-TAAAATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431746 141 - 9219162 --------------TCTCTGTTTCTAGGAAATAATTAGTTCAA----Caagaagggaaagtaaagacagaaagtaaaacaaagt----------ataagacaaaataaaataaagATGGGAATGGAATTCTATAGAAGTGTGG----AAGTTGGAGGGAAAGTTTC-TAAAATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957009 141 + 135778131 --------------TCTCTGTTTCTAGGAAATAATTAGTTCAA----Caagaagggaaagtaaagacagaaagtaaaacaaagt----------ataagacaaaataaaataaagATGGGAATGGAATGCTATAGAAGTGTGG----AAGTTGGAAGGAAAGTTTC-TAAAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723381 141 - 3013352 --------------TCTCTGTTTCTAGGAAATAATTAGTTCAA----Caagaagggaaagtaaagacagaaagtaaaacaaagt----------ataagacaaaataaaataaagATGGGAATGGAATTCTATAGAAGTGTGG----AAGTTGGAGGGAAAGTTTC-TAAAATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954807 141 + 8656713 --------------TCTCTGTTTCTAGGAAATAATTAGTTCGA----CAAGAAGGGGaagtaaagacagaaagtaaaacaaagt----------ataagacaaaataaaataaagATGGGAATGGAATGCTATAGAAGTGTGG----AAGTTGGAGGGAAAATTTC-TAAAATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385203 123 - 190850796 --------------TTTCTGTTTCTAGGAAA----TACTTCAA----CAAGAAGGGaaagta-------------aaacaaaat----------ataaaagaaaataaaataaagatgataatagaatGCCATGGAAATATGG----AAATTGGAGGGGAA-TTTC-TAAAATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469033 137 - 25294431 --------------TCTCTGTTTCTAGGAAATAATTACTTCAA----CAAGAAGGGAAAGta-------------aaacaaaatataatataaaataaaataaaataaaataaaGATGGTAATAGAATGCCATAGAAGTATGG----AAGTTGGAGGGGAA-TTTC-TAAAATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024827 122 - 6311556 --------------TCTCTGTTTCTAGGAAATAATTACTTCAA----CAAGAAGGGAAAGTA-------------AAACAAAAT----------ATAAAAG-----AAAATAAAGATGGTAATAGAATGCCATAGAAATATGG----AAGTTGGAGGGGAA-TTTC-TAAAATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14877930 127 + 15034901 --------------TCTCTGTTTCTAGGAAATAATTACTTCAA----CAaaaagggaaagta-------------aaacaaaat----------ataaaagaaaagaaaataaaGATGGTAACAGAATACCATAGAAGTATGG----AGGTTAGAGCGGAA-TTTC-TAAAATT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 904882 140 - 3201129 --------------ATGTCTTCTCTATGAAACAATTATTTGAA-----AAGAAGAAAAAATAAAGCCAGAAAAT-AATCAAAAT----------GTAAAACAGAATGAAATAAAGATAAGGATTGAATGTTATAGAAGGGTGG----GGTTTTGGAAGAGACTGTCATAAAATC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995317 154 - 53741614 tctctgtctctctctctctgtctcgcatgaataaataaataaaatcttaaaaaaGGAAATTATTACTTGAAAAGGAGAGGAAG-----------AGAAGACAAAATATAGTAAAAACT---ATACAATATCAT--AAGTAGGGTCAAGGGTTGGAG---AAATTTC-AAGAATT i canFam3.chr19 I 104 C 0 e micMur3.chr14 26286175 188 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=671213.000000 s hg38.chr9_KI270719v1_random 4130 66 + 176845 ATTTGGATAAAAAGGAAGCCATATAT-TTTACTGAATCTTCTAGATGGGTTTTAATTCTGTATCCTT s panTro5.chr4 135031293 66 + 194502333 ATTTGGATAAAAAGGAAGCCATATAT-TTTACTGAATCTTCTAGATGGGTTTTAATTCTGTATCCTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 11992 65 - 70559 ATTTGGATAAAAAGGAAGCCATATA--TTTACTGAATCTTCTAGATGGGTTTTAATTCTGTATCCTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425249 66 - 115148730 ATTTGGATAAAAAGGAAGCCATGTAT-TTTACTGAATCTTCTAGATGGGTTTTAATTCTGTATCCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367688 65 + 190429646 ATTTGGAT-AAAAGGAAGCCATATAT-TTTACTGAATCTTCTAGATGGGTTTTAATTCTGTATTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886439 65 + 189454096 ATTTGGAT-AAAAGGAAGCCATATAT-TTTACTGAATCTTCTAGATGGGTTTTAATTCTGTATTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877687 65 - 40319822 ATTTGGAT-AAAAGGAAGCCATATAT-TTTACTGAATCTTCTAGATGGGTTTTAATTCTGTATTCTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431887 65 - 9219162 ATTTGGAT-AAAAGGAAGCCATATAT-TTTACTGAATCTTCTAGATGGGTTTTAATTCTGTATTCTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957150 65 + 135778131 ATTTGGATAAAAAGGAAGCCATATAT-TTTACTGAATCTTCTAGATGGG-TTTATTTCTGCATTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723522 65 - 3013352 ATTTGGAT-AAAAGGAAGCCATATAT-TTTACTGACTCTTCTAGATGGGTTTTAATTTTGTATTCTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5954948 66 + 8656713 ATTTAGATAAAAAAGAAGCCATATAT-TTTACTGAATCTTCTAGATGGGTTTTAATTCTGTATTCTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385326 67 - 190850796 ATTTGGATATTAAGGAAGCCATATATATTTACTGAAACTTCTGGATAAGTTTTAACTCTGTGTTCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469170 67 - 25294431 ATTTGGATAAAAAAGAAGCCATATATATTTACTGAATCTTCTAGATAAGTTTTAACTCTGTGTTCTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4024949 67 - 6311556 ATTTGGATAAAAAAGAAGCCATATATATTTACTGAATCTTCTAGATAAGTTTTAGCTCTGTGTTCTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878057 66 + 15034901 ATTTGGATAAAAAAGAAGCCATATAT-TTTACAGAATCTTCTAGATAAGTTTTAACTCTGTGTTCTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26286363 66 - 93316391 ATTTGGATAAAAAAGAAGTCATTTAT-CTTTCTGCAACTTCCAGATGAGTTTTAATTCTGTTTCCTT i micMur3.chr14 I 188 I 158 s otoGar3.GL873702 905022 64 - 3201129 ATTTGGATAAAAAAGAGGCAATTTAT--TTTCTACAGCCTCCAGATGGTGTTTAAATCTGTTTCCT- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995471 66 - 53741614 ATTCAGGTAAAAAGAAAGCCCTATAA-TATTCTGCAGCATCCAGATGGATTTTCATTCTGTTTTGTT i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=1465602.000000 s hg38.chr9_KI270719v1_random 4196 161 + 176845 TCATACTCATGTACTATGCCTTTTTTTTCAA-CTTTTCATTCCACTTCTACTTCCTAACTTATGATGAATTTACCTATATAGAGTCCTTTTATCATTTAGACTAAAATTGTATTTATTTGAAGGTAAGAACGGTCATATACTTCTT-AGTT---GTTTTCAGAATT s panTro5.chr4 135031359 161 + 194502333 TCATACTCACGTACTATGCCATTTTTTTCAA-CTTTTCATTCCACTTGTACTTCCTAACTTATGATGAATTTACTTATATAGAGTCCTTTTATCATTTAGACTAAAATTGTATTTATTTGAAGGTAAGAACAGTCATATACTTCTT-AGTT---GTTTTCAGAATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12057 161 - 70559 TCATACTCATGTACTATGCCATTTTTTTCAA-CTTTTCATTCCACTTGTACTTCCTAACTTATGATGAATTTACCTATATAGAGTCCTTTTATCATTTAGACTAAAATTGTATTTATTTGAAGGTAAGAACGGTCATATACTTCTT-AGTT---GTTTTCAGAATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425315 161 - 115148730 TCATACTCATGTACTATGCCATTTTTTTCAA-CTTTTCATTCCACTAGTACTTCCTAACTCATGATGAATTTACCTATATAGAATCCTTTTATCATTTAGACTAAAATTGTGTTTATTTGAAGGTAAGAACGGTCATGTACTTCTT-AGTT---GTTTTCAGAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367753 159 + 190429646 TCATACTCGTGTACTATGCCA--TTTTTCAA-GTTTTCATTCCACTAGTCCTTCCTAACTTAGGAAGAATTTACCCATATAGAGTCCTTTTATCATTTAGACTAAAATTGTATTTATTTAAAGGTAAGAACGGTTACATACTTCTT-AGTT---GTTTTCAGAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886504 159 + 189454096 TCATACTCGTGTACTATGCCA--TTTTTCAA-GTTTTCATTCCACTAGTCCTTCCTAACTTAGGAAGAATTTACCCATATAGAGTCCTTTTATCATTTAGACTAAAATTGTATTTATTTAAAGGTAAGAACGGTTACATACTTCTT-AGTT---GTTTTCAGAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877752 159 - 40319822 TCATACTCGTGTACTATGCCA--TTTTTCAA-GTTTTCGTTCCACTAGTCCTTCCTAACTTAGGAAGAATTTACCCATATAGAGTCCTTTTATCATTTAGACTAAAATTGTATTTATTTAAAGGTAAGAACGGTTACATACTTCTT-AGTT---GTTTTCAGAATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4431952 159 - 9219162 TCATACTCATGTACTATGCCA--TTTTTCAA-GTTTTCATTCCACTAGTCCTTCCTAACTCAGGAAGAATTTACCCATATAGAGTCCTTTTATCATTTAGACTAAAATTGTATTTATTTAAAGGTAAGAATGATTACATACTTCTT-AGTT---GTTTTCAGAATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957215 159 + 135778131 TCATACTCATGTACTATGCCA--TTTTTCAA-GTTTTCATTCCACTAGTCCTTCCTAACTTACGAAGAATTTATCCATATAGAATCCCTTTATCATTTAGACTAAAATTGTATTTATTTAAAGGTAAGAACAGTTACATACTTCTT-AGTT---GTTTTCATAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723587 159 - 3013352 TCATACTCATGTACTATGCCA--TTTTTCAA-GTTTTCATTCCACTAGTCCTTCCTAACTTAGGAAGAATTTACCCATATAGAGTCCTTTTATAATTTAGACTAAAATTGTATTTATTTAAAGGTAAGAACGGTTACATACTTCTT-AGTT---GTTTTCAGAATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955014 159 + 8656713 TCATATTCATATACTATGCCA--TTTTTCAC-GTTTTCATTCCACTAGTCCTTCCTAACTTAGGAAGAATTTACCCATATAGAGTCTTTTTATCATTTAGACTAAAATTGTATTTATTTAAAGGTAAGAACGGTTACATACTACTT-AGTT---GTTTTCAGAATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385393 160 - 190850796 TCATATTCATGTACTATGACA--TTTTTCAAACTTTTCATTCCACTAGTTCTTCCTAACTTATAATGAATTTACCTATATAGACTCCTTTTATCATTTAGACTAAAATTTTATTTATTCAAACGTAAGAATGGTTGTATACTTCTT-AGTT---GTTTTCAGAGTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469237 160 - 25294431 TCATACTCATGTACTATGCCA--TTTTTCAACCTTTTCATTCCACTAGTTCTTTCTAACTTATGATGAATTTACCTATATAGACTCCTTTTATCATTTAGACTAAAATTTTATTTATTTGAACGTAAGAATGGTCATATACTTCTT-AGTT---GTTTTCAGAATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025016 160 - 6311556 TCACATTCATGTACTGTGCCA--TTTTTCAACCTTTTCATTCCACTAGTTCTTCCTAACTTATGACGAATTTACCTATATAGACTCCTTTTATCATTTAGACTAAAATTTTATTTATTCAAACCTAAGAATGGTCACATACTTCTA-AGTT---GTTTTCAGAATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878123 159 + 15034901 TCATACTCATGTACTATGCCA---TTTTCAACCTTTTCATTCCATTAGTTCTTCCTAACTTATGATGAATTTACCTATATAGACTCCCTTTATCATTTAGACTAAAATTCTATTTATTTGAATGTAAGAATGGTCATATACTTCTT-AGTT---GTTTTCAGAAAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 905086 128 - 3201129 TCATGCTTACACAATAGAATT--CTCCTAAA-GTTTTCATTCCACTAG----TTCCAACTTATGATTAATTTAC---------------------------CTAAAATCTAATTTATATG-AGGTGAGAACTATCATCTACTTCTTAAGTT---TGTTTCAACATT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995537 159 - 53741614 TCATACTCCTGTATTATAG-A--TTTTTCAACTTTTTCATTCCAATAATCCTTTTTAACTTATGATGAATTCAGCTGTATAGACTCTCTTCATCATTTAGAGTTAAATTTAGTTTATTAGAAGGTAAGAAGCATCATA---CTCTT-AGTTCAATTTTTTAGAATT i canFam3.chr19 C 0 C 0 e micMur3.chr14 26286429 158 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=1294026.000000 s hg38.chr9_KI270719v1_random 4357 311 + 176845 GAAAACATGGTTGAggccaggcacggtgtctctcatctgtaatcctagcactttgagaggccgaggcggggggactacgagatcaggagttcgataccagcctgaccaacatggagaaacgtggtctctactaaaaatacaaaattagctgggcatggtagtgcacacctgtaatcccagctatttgggaggctgagtaaggagaatcgc------ttgaaccctggaggcagaggttgcagtgagccaagatcacgccattgcactccagcctgggcaacaagagcaaaact-catctcaaaa--------gaaaaaaa-------aaaaaa s panTro5.chr4 135031520 311 + 194502333 GAAAATATGGTTGAggccaggcacggtgtctctcgtctgtaatcgtagcactttaagaggccgaggtgggtggaccacgagaacaggagttcaataccagcctgaccaacatggagaaatgcggtctttactaaaaatacaaaattagctgggcatggtagtgcacacctgtaatcctagctatttgggaggctgagtaaggagaatcgc------ttgaaccctggaggcagaggttgcagtgagccgagatcacccctttgcactccagcctgggcaacaagagcaaaact-catctcaaaa--------gaaaaaaa-------aaaaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12218 318 - 70559 GAAAACATGGTTGAggccaggcacggtgtctctcatctgtaatcctagcactttgagaggccgaggcagggggactacgagatcaggagttcaataccagcctgaccaacatggagaaacgtggtctctactaaaaatacaaaattagctgggcatggtagtgcacacctgtaatcccagctatttgggaggctgagtaaggagaatcgc------ttgaaccctggaggcagaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacaagagcaaaact-cATCTCaaaa--------gaaaaaaaaaaaaagaaaaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425476 305 - 115148730 GAAAACATGGTTGAggccaggcacggtgtctctcatctgtaattctagcactttgagaggccaaggtgggtggaccacgagatcaggagttcaataccagcctgaccaacatggggaaaccctgtctctactaaaaatacaaaattagctggacgtggtagtgcacacctgtaatcacagctattcgggaggctgaggcaggagaatcac------ttgaaccctggaggcagaggttgcagtgagccaagatcacgccattgcgctccagcctgggcaacaagagcaaacct-cgtctcaaaa--------ga-------------aaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131367912 325 + 190429646 GAAAACATGGTTGAggccaggtgcagggtctcatgtctgtaatcccagcactttgagaggctgaggcgggtggaacacaaggtcaggagttcgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaattagctgggaggggtggtgcatgcctgtcatcccagctacttgggaggctgaggcagaagaatcacttgaatttgaacccgggaggcagaggttgcagggaactgagatcatgctactgtacttcagcct-ggcaacaaaagcgaaactccaccacaaaatggaaaaaaaaaaaaa-------aataaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886663 323 + 189454096 GAAAACATGGTTGAggccaggtgcagggtctcatgtctgtaatcccagcactttgagaggctgaggcgggtggaacacaaggtcaggagttcgagaccagcctgaccaacatggagaaaccctgcctctactaaaaatacaaaattagctgggaggggtggtgcatgcctgtcatcccagctacttgggaggctgaggcagaagaatcacttgaatttgaacccgggaggcagaggttgcagggaactgagatcatgccactgtacttcagcct-ggcaacaaaagcgaaactccaccacaaaatgg--aaaaaaaaaaa-------aataaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34877911 325 - 40319822 GAAAACATGGTTGAggccaggtgcagggtctcatgtctgtaatcccagcactttgagaggctgaggcgggtggaacacaaggtcaggagttcgagaccagcctgacaaacatggagaaaccctgtctctactaaaaatacaaaattagctgggaggggtggtgcatgcctgtcatcccagctacttgggaggctgaggcagaagaatcacttgaatttgaacccgggaggcagaggttgcagggaactgagatcatgccactgtacttcagcct-ggcaacaaaagcgaaactccaccacaaaatggaaaaaaaaaaaaa-------aataaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432111 315 - 9219162 GAAAACATGGTTGAggccaggtgcagggtcttatgtctgtaatcccagcactttgagaggctgaggcgggtggaacacaaggtcaggagttcgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaattagctgggaggggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcac------ttgaacccgggaggcagaggttgcagggaactgagatcatgccactgtacttcagcct-ggcaacaaaagcgaaactccaccacaaaatgg----aaaaaaaaa-------aataaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957374 319 + 135778131 GAAAACATGGTTGAggccaggtgcagcgtctcatgtctgtaatcccagcactttgaaaggctgaggcgggtggaacacgaggtcaggagttcgagaccatcctgaccaacatggagaaaccctgtctctactaaaaatacaaaattagctcgga-gggtggtgcaggcctgtaatcccagctacttgggaggctgaggtaggagaatcacttgaacttgaacccaggaggcagaggttgcagggagccgagatcatgccactgtactttagcct-ggcaacaaaagcgaaactccaccacaaaatgg-----aaaaaata-------aataaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2723746 323 - 3013352 GAAAACATGGTTGAggccaggtgcagggtctcatgtctgtaatcccagcactttgagaggctgaggcgggtggaacacagggtcaggagttcgagaccagcctgaccaacatggagaaaccgtgtctctactaaaaatacaaaattagctgggaggggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaatttgaacctgggaggcagaggttgcagggaactgagatcatgccactgtacttcagcct-ggcaacaaaagcgaaactccaccacaaaatgg--aaaaaaaaaaa-------aataaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955173 322 + 8656713 GAAAACATGGTTGAggccaggtgcggcatctcacgtctgtaatcccagcactttgagaggctgaggagggtggaacatgaggtcaggagttcaagaccagcctgaccaacatggagaaaccctgtctctattaaaaatacaaagttagctgggtgtggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacttgaacccgggaggcagaggttgcagggagccaagatcatgccattgtactccagcct-ggtaacaaaagcaaaactccatcacaaaatgg---aaaaaaaaaa-------aaaaaa i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 26286429 158 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43995696 0 - 53741614 C e otoGar3.GL873702 905214 0 - 3201129 C e aotNan1.NW_018507635v1 14878282 0 + 15034901 C e cebCap1.NW_016107420v1 4025176 0 - 6311556 C e saiBol1.JH378129 6469397 0 - 25294431 C e calJac3.chr3 129385553 0 - 190850796 C a score=22325.000000 s hg38.chr9_KI270719v1_random 4668 2 + 176845 ga s panTro5.chr4 135031831 2 + 194502333 ga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12536 2 - 70559 ga i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425781 2 - 115148730 ga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368237 2 + 190429646 ga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886986 2 + 189454096 ga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34878236 2 - 40319822 ga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432426 2 - 9219162 ga i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957693 2 + 135778131 ga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724069 2 - 3013352 ga i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955495 2 + 8656713 ga i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385553 2 - 190850796 GA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469397 2 - 25294431 GA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025176 2 - 6311556 GA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878282 2 + 15034901 GA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 905214 2 - 3201129 GG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995696 2 - 53741614 GG i canFam3.chr19 C 0 C 0 e micMur3.chr14 26286429 158 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=85096.000000 s hg38.chr9_KI270719v1_random 4670 7 + 176845 aaaCATG s panTro5.chr4 135031833 7 + 194502333 aaaCATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12538 7 - 70559 aaaCATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425783 7 - 115148730 aaaCATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368239 7 + 190429646 aaACCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886988 7 + 189454096 aaaCATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34878238 7 - 40319822 aaACATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432428 7 - 9219162 aaaCATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957695 7 + 135778131 aaaCATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724071 7 - 3013352 aaaCATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955497 7 + 8656713 aaaCATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385555 7 - 190850796 AAACATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469399 7 - 25294431 AAACATG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025178 7 - 6311556 AAACATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878284 7 + 15034901 AAACATG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26286587 7 - 93316391 AAACATA i micMur3.chr14 I 158 C 0 s otoGar3.GL873702 905216 7 - 3201129 AAACAAA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995698 7 - 53741614 GAACATA i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1665830 2127 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=347975.000000 s hg38.chr9_KI270719v1_random 4677 36 + 176845 GTTGAAAGTCA-ATATCCATGTGATAAATTGAGTTAG s panTro5.chr4 135031840 36 + 194502333 GTTGAAAGTCA-ATATCCATGTGATAAATTGAGTTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12545 36 - 70559 GTTGAAAGTCA-ATATCCATGTGATAAATTGAGTTAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425790 36 - 115148730 GTTGAAAGTCA-ATATCCACGGGATAAATTGAGTTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368246 30 + 190429646 GTTGAAAG-------TCCACATGATAAATTGAGTTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130886995 30 + 189454096 GTTGAAAG-------TCCACATGATAAATTGAGTTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34878245 30 - 40319822 GTTGAAAG-------TCCACATGATAAATTGAGTTAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432435 30 - 9219162 GTTGAAAG-------TCCACATGATAAATTGAGTTAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957702 30 + 135778131 GTTGAAAG-------TCCACATGATAAATTGAGTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724078 30 - 3013352 GTTGAAAG-------TCCACATGATAAATTGAGTTAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955504 30 + 8656713 GTTGAAAG-------TCCACGTGATAAATTGAGTTAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385562 36 - 190850796 GTTGCAAGTCA-ATATCCATGAGATAAATTGAGTTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469406 36 - 25294431 GTTGAAAGTCA-ATATCCATGAGATAAATTGAGTTAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025185 36 - 6311556 GTTGAAAATCA-ATATCCATGAGAAAAATTGAGTTAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878291 36 + 15034901 GTTGAAAGTCA-ATATCCATGAGATAAATTGAGTTAG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26286594 36 - 93316391 GTTGAAAATCA-TTATCCATGTGATAAATTGAGTTAG i micMur3.chr14 C 0 I 116 s otoGar3.GL873702 905223 36 - 3201129 ATTGAAAATCA-TTAACCATGTGATAAATTGAGTTAG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995705 37 - 53741614 GTTGAAAATCATTTATCCAAGTGATAAATTGAAGTAG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 4307520 36 - 5974691 GTTGAAAGTCA-CTATCTGTGTGACAAAATGAATTAG i dasNov3.JH569232 n 2127 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=543704.000000 s hg38.chr9_KI270719v1_random 4713 56 + 176845 AAAGCCAATGAGAGCTT-----AGCTAATATAAAGGTGATGGAATTCAC--TATC--AAAACTTT s panTro5.chr4 135031876 56 + 194502333 AAAGCCAATGAGAGCTT-----AGCTAATATAAAAGGGATGGAATTCAC--TATC--AAAACTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12581 56 - 70559 AAAGCCAATGAGAGCTT-----AGCTAATATAAAAGTGATGGAATTCAC--TATC--AAAACTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425826 56 - 115148730 AAAGCCAATGAGAGCTT-----AGCTAATATAAAAGTGATGGAATTCCG--TATC--AAAACTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368276 56 + 190429646 AAAACCAATGAGAGCTT-----AGCTAATATAAAAATTATGGAATGAAG--TATC--AAAACTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887025 56 + 189454096 AAAACCAATGAGAGCTT-----AGCTAATATAAAAATTATGGAATGAAG--TATC--AAAACTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34878275 56 - 40319822 AAAACCAATGAGAGCTT-----AGCTAATATAAAAATTATGGAATGAAG--TATC--AAAACTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432465 56 - 9219162 AAAACCAATGAGAGCTT-----AGCTAATATAAAAGTGATGGAATGAAG--TATC--AAAACTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957732 56 + 135778131 AAAACTAATGAGAGCTT-----AGCTAATATAAAAATGATGGAATGAAG--TATC--AAAACTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724108 56 - 3013352 AAAACCAATGAGAGCTT-----AGCTAATATAAAAATGATGGAATGAAG--TATC--AAAACTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955534 61 + 8656713 AAAGCCAACGAGCGCTTAGCTAAGCTAATATAAAAATGATGGAATGAAG--TATC--AAAACTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385598 56 - 190850796 AAAGCCGATGAGAGGTT-----AGCTAATATAAAAATATTGGAATTTAG--TATC--AAAACTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469442 56 - 25294431 AAAGCCAATGGGAGGTT-----AGCTAATATAAAAATAATGGAATTTAG--TATC--AAAGTTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025221 56 - 6311556 AAAGCCAATGAGAGGTT-----AGTTAATATAATAATAATGGAATTTAG--TATC--AAAACTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878327 56 + 15034901 AAAGCCAATGAGAGCTT-----AGCTAATATAAAAATAATGGAATTCAG--TATC--AAAACTTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 905259 56 - 3201129 AGAACCAACGGAAACTT-----AGCTAATACAAA--TGATTACATTTTA--TATCTTAAAACTTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43995742 58 - 53741614 AGGGACAATGGAAGCCT-----AGCTAATACAAAGATGATTTAATTTTGGTTATT--AAAACTTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 4307556 57 - 5974691 AAGGCCAATGGAAGCTT-----CATTAAAACAATA-TTATTGAATTAAG--TGTCTTAAAACTTT i dasNov3.JH569232 C 0 n 0 e micMur3.chr14 26286630 116 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=533250.000000 s hg38.chr9_KI270719v1_random 4769 58 + 176845 TCAGAGACTTAG-AAAAAATATGGAAAATTAGTGAAAATGTAACAGAATG-AGGCTTGAA s panTro5.chr4 135031932 58 + 194502333 TCGGAGACTTAG-AAAAAATATGGAAAATTAGTGAAAATGTAAGAGAATG-AGCCTTGAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12637 58 - 70559 TCAGAGACTTAG-AAAAAATATGGAAAATTAGTGAAAATGTAAGAGAATG-AGGCTCAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425882 58 - 115148730 TCAGAGACTTAG-AAAAAATATGGAAAATTAGTGAAAATGTAAGAGAATG-AGGCTCGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368332 59 + 190429646 TCAGAGACTTAGAAAAAAATATGGAATATTAGTGAAAATTTAAGAGAATG-AGGCTTGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887081 59 + 189454096 TCAGAGACTTAGAAAAAAATATGGAATATTAGTGAAAATTTAAGAGAATG-AGGCTTGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34878331 59 - 40319822 TCAGAGACTTAGAAAAAAATATGGAATATTAGTGAAAATTTAAGAGAATG-AGGCTTGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432521 59 - 9219162 TCAGAGACTTAGAAAAAAATATGGAATATTAGTGAAAATTTAAGAGAATG-AGGCTTGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957788 59 + 135778131 TCAGAGACTTAGAAAAAAATATGGAATATTAGTGAAAATTTAAGAGAATG-AGGCTTGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724164 59 - 3013352 TCAGAGACTTAGAAAAAAATATGGAATATTAGTGAAAATTTAAGAGAATG-AGGCTTAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955595 59 + 8656713 TCAGAGACTTAGAAAAAAATATGAAATATTAGTGAAAATTTAAGAGAATG-AGGCTTGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385654 57 - 190850796 TCAGAGACTC---AAAAAATATGAAAAATTGGTGAAAATGTAAGAGAATGGAGGCTTGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469498 59 - 25294431 TCAGAGACTCAG-AAAAAATATGAAAAATTGGTGAAAATGTAAGAGAATGAAGGCTTGAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025277 59 - 6311556 TCAGAGACTCAG-AAAAAATATGAAAAATTCATGAAAATGTAAGAGAATGAAGGCTTGAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878383 59 + 15034901 TCAGAGACTAAG-AAAAAATATGAAGAATTGGTGAAAATGTAAGAGAATGAAGGCTTGAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 905315 55 - 3201129 TCAGACAGTAAG--AAAAGTATGGAAAATTACTAAAAAT---AAAAAATGAAGATTTGCA i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 43995800 51 - 53741614 TCTGAATAATAA-AAAGAAGA--------TAGTGGAAATACAGGAGAATACAGGTTATAA i canFam3.chr19 C 0 I 2 s dasNov3.JH569232 1667957 58 + 5974691 TTAGAGACAAAG-AAAAAATATGGATGATTAGTGAAAATAGAGGAGAATGGAGTTTTGA- i dasNov3.JH569232 I 2127 C 0 e micMur3.chr14 26286630 116 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=705901.000000 s hg38.chr9_KI270719v1_random 4827 58 + 176845 -AT--CAAGATAattaaactgcaaactttaagaaggcaggaaagatatcctttacttagtt s panTro5.chr4 135031990 60 + 194502333 -ATATCAAGATaattaaactgcaaactttaagaaggcaggaaagatatcctttacttagtt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12695 58 - 70559 -AT--CAAGATaattaaactgcaaactttaagaaggcaggaaagatatcctttacttagtt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90425940 60 - 115148730 -ATACCAAGATAATTGAACTGCAAACTTTAAGAAGGCAGGAAAGATATCCTTTAATTAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368391 60 + 190429646 -ATATCAAGATAATTAAACTGCAAACTTTAAGAAGACAGGAAAGATATCCTTTAATTAGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887140 60 + 189454096 -ATATCAAGATAATTAAACTGCAAACTTTAAGAAGACAGGAAAGATATCCTTTAATTAGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34878390 60 - 40319822 -ATATCAAGATAATTAAACTGCAAACTTTAAGAAGACAGGAAAGATATCCTTTAATTAGAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432580 60 - 9219162 -ATATCAAGATAATTAAACTGCAAACTTTAAGAAGACAGGAAAGATATCCTTTAATTAGTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957847 60 + 135778131 -ATATCAAGATAATTAAACTGCAAACTTTAAGAAGACAGGAAAGATATCCTTTAATTAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724223 60 - 3013352 -ATATCAAGATAATTAAACTGCAAACTTTAAGAAGACAGGAAAGATATCCTTTAATTAGTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955654 60 + 8656713 -ATATCAAGATAATTAAACTGCAAACTTTAAGAAGACAGGAGAGATATCCTTTAATTAGTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385711 60 - 190850796 -ATATCAAGAAAATTAAACTGCAAACTTTAAGAAAGCAGGAAAGATATCCTTTAATTAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469557 60 - 25294431 -ATATCAAGATAATTAAACTGCAAACTTTAAGAAAGCAGGAAAGATATCCTTTAATTAGTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025336 60 - 6311556 -ATATCAAGATaattaaactgaaaactttaagaaagcaggaaagatatcctttaattagtt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878442 60 + 15034901 -ATATCAAGATaattaaactgcaaactttaagaaagcaggaaagatatcctttaattagtt i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26286746 58 - 93316391 ---ATCAAGATaattagactacgaactttaagaaggcaaggaatatatcctttaattaatt i micMur3.chr14 I 116 C 0 s otoGar3.GL873702 905371 58 - 3201129 ---ATCAAGGAAATAGGACTGCTGACTTTAAGAAGGCAGGGAATATATTCTTTGATTCCTT i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 43995853 57 - 53741614 ---ATCAAGATAATTAGATCTTAAACTTTAAAAAAATAGGGAAtatgt-atttatttattt i canFam3.chr19 I 2 I 234 s dasNov3.JH569232 1668015 57 + 5974691 AATGTTAAGATAA----ACTTTGGGTTTTAAGAAGGCAGAGAATATATTCTTTAATTACTC i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=64186.000000 s hg38.chr9_KI270719v1_random 4885 7 + 176845 tgtcttg s panTro5.chr4 135032050 7 + 194502333 tgtcttg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12753 7 - 70559 tgtcttg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426000 7 - 115148730 TGTCTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368451 7 + 190429646 TGTGTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887200 7 + 189454096 TGTGTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34878450 7 - 40319822 TGTGTTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432640 7 - 9219162 TGTGTTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957907 7 + 135778131 TGTGTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724283 7 - 3013352 TGTGTTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955714 7 + 8656713 TCTCTTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385771 7 - 190850796 TGTCTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469617 7 - 25294431 TGTCTTG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025396 7 - 6311556 tgtcttg i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878502 7 + 15034901 tgtcttg i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26286804 7 - 93316391 tgtatag i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 905429 7 - 3201129 TGTATAG i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1668072 7 + 5974691 TGTATAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43995910 234 - 53741614 I a score=2316153.000000 s hg38.chr9_KI270719v1_random 4892 205 + 176845 tccaactaatggttagttga-atgccatgc-----------acataacgc-atccctctgagtacttattgaat-aaatgT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTAGAGGGATAGCAGTGTGAAAAGTGAGATTAATTTATTTGGTATAGAGTCAGTAAATTTAAGTGGGCCATTTGAAACAACAAGCTTAAAAGAAAAC--CAAATAA s panTro5.chr4 135032057 205 + 194502333 tccaactaatggttagttga-atgccatgc-----------acataacac-atccctttgagtacttattgaAT-CAATGT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTAGAGGGATAGCAGTGTGAAAAGTGAGATTAATTTATTTGGTATAGAGTCAGTAAATTTAAGTGGGCCATTTGAAATAACAAGCTTAAAAGAAAAC--CAAATAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12760 205 - 70559 tccaactaatggttagttga-atgccatgc-----------acataacac-atccctctgagtacttattgaAT-AAATGT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTAGAGGGATAGCAGTGTGAAAAGTGAGATTAATTTATTTGGTATAGAGTCAGTAAATTTAAGTGGGCCATTTGAAACAACAAGCTTAAAAGAAAAC--CAAATAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426007 205 - 115148730 TCCAACTAACGGTTAGTTGA-ATGCCATGC-----------ACATAACAC-ATCCCTTTGAGTACTTATTGAAT-AAATGC-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTAGAGGGATAGCAGTGTGAAAGGTGAGATTAATTTATTTGGTATAGAGTCCGTAAGTTTAAGTGGGCCATTTGAAACAACAAGCTAAAAAGAAAAC--CAAATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368458 204 + 190429646 TCTAACTAACGGTTAATTGA-ATGCAATGC-----------ACATAACAC-ATTCCTTTGAGTATTTATTGAAT-AAATGT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTGGAGGGATAGCAGTGTGAAGAGTGAGATTAATTTATTTGGTGTAAAGTCAGTAAATTTAAGTCGGCCATTTGAAAC-ACAAGCTAAAAAGAAAAC--CAAATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887207 204 + 189454096 TCTAACTAATGGTTAATTGA-ATGCAATGC-----------ACATAACAC-ATTCCTTTGAGTATTTATTGAAT-AAATGT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTGGAGGGATAGCAGTGTGAAGAGTGAGATTAATTTATTTGGTGTAAAGTCAGTAAATTTAAGTGGGCCATTTGAAAC-ACAAGCTAAAAAGAAAAC--CAAATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34878457 204 - 40319822 TCTAACTAATGGTTAATTGA-ATGCAATGC-----------ACATAACAC-ATTCCTTTGAGTATTTATTGAAT-AAATGT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTGGAGGGATAGCAGTGTGAAGAGTGAGATTAATTTATTTGGTGTAAAGTCAGTAAATTTAAGTGGGCCATTTGAAAC-ACAAGCTAAAAAGAAAAC--CAAATAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432647 204 - 9219162 TCTAACTAATGGTTAATTGA-ATGCAATGC-----------ACATAACAC-ATTCCTTTGAGTATTTATTGAAT-AAATGT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTGGAGGGATAGCAGTGTGAAGAGTGAGATTAATTTATTTGGTGTAGAGTCAGTAAATTTAAGTGGGCCATTTGAAAC-ACAAGCTAAAAAGAAAAC--CAAATAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78957914 204 + 135778131 TCTAACTAATGATTAATTGA-ATGCAATGC-----------ACATAACAC-ATTCCTTTGAGTATTTATTGAAT-AAATGT-AGAATGTCATTCTGGAATAAATTGAG---CCAAGAAACTGGAGGGATAGCAGTGTGAAGAGTGAGATTATTTTATTTGGTGTAGAGTTAGTAAATTTAAGTGGGCCATTTGAAAC-ACAAGCTAAAAAGAAAAC--CAAATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724290 204 - 3013352 TCTAACTAATGGTTAATTGA-ATGCAATGC-----------ACATAACAC-ATTCCTTTGAGTATTTATTGAAT-AAATGT-GGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTGGAGGGATAGCAGTGTGAAGAGTGAGATTAATTTATTTGGTGTAGAGTCAGTAAATTTAAGTGGGCCATTTGAAAC-ACAAGCTAAAAAGAAAAC--CAAATAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955721 205 + 8656713 TCTAACCAATGGTTAATTGA-ATGCAATGC-----------ACATAACAC-ATCCCTTTGAGTACTTATTGAAT-AAATGT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTGGAGGGATAGCAGTGTGAAGAGTGAGATTAATTTATTTGGTGTAGAGTCAGTAAATTTAAGTGGGCCATTTGAAACAACAAGCTAAAAAGAAAAC--CAAATAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385778 205 - 190850796 TCCAATTAATGGTTAGCTGA-ATGCCATGC-----------ACATAACAC-ATCCCTTTGAGTACTTATTGAAT-AAAGGT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTGGAGGAATAGCAGTGTGAAGAGTGAGATTAATTTATCTGGTATAGAGTCAGTAAATTTAAGTGGGCCATTTGAAACAACGAGCTAAAAAGAAAAT--CAAATAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469624 205 - 25294431 TCCAATTAATGGTTAGTTGA-ATGCCATGC-----------ACATAACAC-ATCCCTTTGAGTACTTATTGAAT-AAAGAT-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTGGAGGAATAGCAGTATGAAGAGTAAGATTAATTTATCTGGTATAGAGTCAGTAAATTTAAGTGGGCCATTTGAAGCAACGAGCTAAAAAGAAAAT--CAAATAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025403 202 - 6311556 tccaattaatggttagttga-atgccatgc-----------acataacac-atccctttgagtacttattgaAT-AAAGGT-AGAATGTCATTCTGGAATAAATTGAG---ACAAGAAACTGGAGAAAT---AGTGTGAAGAGTGAGATTAATTTATCTGGTATAGAGTCAGTAAATTTAAGTGGGCCATTTGAAACAACGAGCTAAAAAGAGAAT--CAAGTAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878509 205 + 15034901 tccagttaatggttagctga-atgccatgc-----------acataacac-atctctttgggtacttattgaAT-AAAGGC-AGAATGTCATTCTGGAATAAATTGAG---GCAAGAAACTAGAGGAATAGCGGTGTGAAGAGTGAGATTAATTTATCTGGTATAGAATCAGTAAATTTAAGTGGGTCATTTGAAACAACGAGCTAAAAATAAAAA--CAAATAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26286811 189 - 93316391 tccaactaatggttagttca-ttgccatgc-----------acataACAC-ATTTTATTGA---------ATAA-AAATGT-AGAATGTTATTATGGAATAAGTAAAG---GAGAAAAACTAGAGGAAAAGCAGTGTGAAGAGTGAGATTAATTTAACTAGTATACAGTCAGTAAATTTAAGTGGGCCACATGAAACAATGAGCTGGAAAAAAAAA--------- i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 905436 192 - 3201129 TCCAACTAATGGTTAGTTGAGCTATTATGC-----------ACGTGGCAC-ATTTCTTTGA-TCCTCATCAAAT-AAAAGT-AAAATGATATTATGGAATAAATTAAG---GAGAGAAGATAGAGAAAAAGTAATGTGAAGAGTGAGATTAATTTTATTGGTAAA----CAGTAAATTTAA---GACCATTTGAAGAAATGAGGTGGAAAAAAGGA--------A i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43996144 212 - 53741614 TCTAACTAATTATTAGTTCA-GTTACACAC-----------ATACACCATAAATTCTTTGAGTACTCATTGAATAAAATAT-AGAATGCCATTAAGGGATAAACTGAAAATGAAGGAAACTAGAGGAAAATCAGTATGAAGAATAAGATTAATTTAATTGGCATACAGTCACTAAATTCCAGAAAGCAAGTTGAAGCAATGAGCTAAAAACTAAATAGCAAATAa i canFam3.chr19 I 234 I 1975 s dasNov3.JH569232 1668079 185 + 5974691 TCTAACTAATGGTTAGTTCA-GTGCCATGCTTCGGTGTCATGTACATCAC-AATCTTCTAAGTACGTGCTCGAT-AAATGTCAAAATATCTTTATTAGATAAATTGAGAA-AAAAGAAACTAGAGAAAACTCAGTGTGAGTAATGAGATTA-----------------------------AGTGGTCCATTTGACACAATGAGCTGAAAAAAAAAA--AG----- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=53461.000000 s hg38.chr9_KI270719v1_random 5097 6 + 176845 GCATTT s panTro5.chr4 135032262 6 + 194502333 GCATTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12965 6 - 70559 GCATTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426212 6 - 115148730 GCATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368662 6 + 190429646 GCATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887411 6 + 189454096 GCATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34878661 6 - 40319822 GCATTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4432851 6 - 9219162 GCATTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78958118 6 + 135778131 GCATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724494 6 - 3013352 GCATTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5955926 6 + 8656713 GCATTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129385983 6 - 190850796 GAATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6469829 6 - 25294431 GAATTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025605 6 - 6311556 GAATTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14878714 6 + 15034901 GAATTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26287000 4 - 93316391 --GATT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 905628 6 - 3201129 GTGATT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1668264 6 + 5974691 ACAATT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43996356 1975 - 53741614 I a score=1251478.000000 s hg38.chr9_KI270719v1_random 5103 123 + 176845 TCAATGCATAGAAATGCAACCATTTTTCTCCTTC------TGTACTTTATCCATTCAAACATTGCTTG-AAAAAA-AATA--TAACTTTC-AGTCTTGCTTTTTTATCTCCACCAAACTCAGATAATTTTGGTC s panTro5.chr4 135032268 124 + 194502333 TCAATGCATAGAAATGCAACCATTTTTCTCCTTC------TGTACTTTATCCATTCAAACATTGCTTG-AAAAAAGAATA--TAACTTTC-AGTCTTGCTTTTTTATCTCCACCAAACTCAGATAATTTTGGTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 12971 123 - 70559 TCAATGCATAGAAATGCAACCATTTTTCTCCTTC------TGTACTTTATCCATTCAAACATTGCTTG-AAAAAA-AATA--TAACTTTC-AGTCTTGCTTTTTTATCTCCACCAAACTCAGATAATTTTGGTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426218 123 - 115148730 TAAATGCATAAAAATGCAACCATTTTTCTCCTTC------TGTACTTTATCCATTCAAACACTGCTTG-AAAAAA-TATG--TAACTTTC-AGTCTTGCTTTTTTGTCTCCACCAAACTCAGATAATCTTGGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368668 123 + 190429646 TTAATGCATAGAAGTGCAACCATTTTTCTCCTTC------TGTACTTTATCCATCCAAACACTACTTG-AAAACA-TATA--TAACTTTC-AGTCGTGCCTTTTTATTTCCACCAAACTCAGATAATTTCAGTC i rheMac8.chr5 C 0 I 2 s macFas5.chr5 130887417 123 + 189454096 TCAATGCATAGAAGTGCAACCATTTTTCTCCTTC------TGTACTTTATCCATCCAAACACTACTTG-AAAACA-TATA--TAACTTTC-AGTCGTGCCTTTTTATTTCCACCAAACTCAGATAATTTCAGTC i macFas5.chr5 C 0 I 2 s macNem1.NW_012010911v1 34878667 123 - 40319822 TCAATGCATAGAAGTGCAACCATTTTTCTCCTTC------TGTACTTTATCCATCCAAACACTACTTG-AAAACA-TATA--TAACTTTC-AGTCGTGCCTTTTTATTTCCACCAAACTCAGATAATTTCAGTC i macNem1.NW_012010911v1 C 0 I 2 s cerAty1.NW_012000798v1 4432857 123 - 9219162 TCAGTGCATAGAAGTGCAACCATTTTTCTCCTTC------TGTATTTTATCCATCCAAACACTACTTG-AAAACA-TATA--TAACTTTC-AGTCTTGCCTTTTTATTTCCACCAAACTCAGATAATTTCAGTC i cerAty1.NW_012000798v1 C 0 I 2 s chlSab2.chr7 78958124 124 + 135778131 TCAATGCATAGAAGTGCAACCATTTTTCTCCTTC------TGTACTTTATAAATCCAAACACTACTTGAAAAAAA-TATA--TAACTTTC-AGTCTTGCCTTTTTATTTCCACCAAACTCAGATAATTTCGGTC i chlSab2.chr7 C 0 I 2 s manLeu1.NW_012103277v1 2724500 123 - 3013352 TCAATGCATAGAAGTGCAACCACTTTTCTCCTTC------TGTACTTTATCCATCCAAACACTACTTG-AAAACA-TATA--TAACTTTC-AGTCTTGCCTTTTTATTTCCACCAAACTCAGATAATTTCAGTC i manLeu1.NW_012103277v1 C 0 I 2 s colAng1.NW_012114544v1 5955932 123 + 8656713 TCAATGCATAGAAGTGCAACCATTTTTCTCCTTC------TGTTCTTTCTCCATCCAAACACTACTTG-AAAAAA-TATT--TAACTTTC-AGTCTTGCCTTTTTATTTCCACCAAACTCAGATAATTTCGGTC i colAng1.NW_012114544v1 C 0 I 2 s calJac3.chr3 129385989 118 - 190850796 TCAATGCATAGAAATGCAACCATTTTTCTCTTTC------TGTACTTTACCCATTTGAACACTACTTG-AAAAAA-TAT-----ATTTT---GTCTTGCTTTTTTATCTCCACCAAACTCAGATAATTTTGGTC i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6469835 120 - 25294431 TCAATGCATAGAAATGCAACCATTTTTCTCTTTC------TGTACTTTACCCATTTGAACACTACTTG-AAAAAA-TAT-----ACTTTC-AGTCTTGCTTTTTTATCTCCACCAAACTCAGATAATTTTGGTC i saiBol1.JH378129 C 0 I 2 s cebCap1.NW_016107420v1 4025611 112 - 6311556 TCAATGCATAGAAATGCAA--------CTCTTTC------TGTACTTTACCCATTTGAACACTATTTG-AAAAAA-TAT-----ACTTTC-AGTCTTGCTTTTTTATCTCCACCAAACTCAGATAATTTTGGTC i cebCap1.NW_016107420v1 C 0 I 2 s aotNan1.NW_018507635v1 14878720 120 + 15034901 TCAATGCATAGAAATGCAACCATTTTTCTCTTTC------TGTATTTTATCCATTTGAACACTACTTG-AAAAAA-TAT-----ACTTTC-AGTCTTGCTTTTTTATCTCCACAAAACTCAGATAATTTTGGTC i aotNan1.NW_018507635v1 C 0 I 2 s micMur3.chr14 26287004 119 - 93316391 TCAGTGGATAGACATAGAACTGTTTTTCCCTTTC------TA-AGTTTATCCATTCAAGTATTGTTTG-AAAAAC--GTG----ACTTTC-AGTCCTGCTTTTGTATCTCTACCAAACATAGATAATTTGGGGT i micMur3.chr14 C 0 I 3 s otoGar3.GL873702 905634 118 - 3201129 TCAGTGGATAGAAATACACC---TTTCACTTTTT------CA-AGTTTGTCCACTGAAATGCTACTTG-AAAAAA--GTG--TAACTTCC-AGTCTTGCTTTTCTATCTCTTCCAAACTCAGATAATTTGGGGT i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 43998331 124 - 53741614 taaaTGTGTAAAGATTCCACTGTTGCTCttttttaatatatataatttatCCATTCAA----TACTTT-AAAAAT-GGTA----ACTTTCAAGTTTTGTTTGTGTGTCTTTACCAAACCCAAGTGCTTTTGGTC i canFam3.chr19 I 1975 I 19 s dasNov3.JH569232 1668270 117 + 5974691 TTGATGGATAGAAATAAAA--------CTCTTTT------TGTAGTTTACCCATTCAAGTAGTACTTG-AAAAAG-AAAAAGAAACTTTCTCGACTTGC-TTTGTGTCTCTACCAAACTCAGATAATTTTGTTT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=-2171.000000 s hg38.chr9_KI270719v1_random 5226 1 + 176845 -A s panTro5.chr4 135032392 1 + 194502333 -G i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 13094 1 - 70559 -A i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426341 1 - 115148730 -T i nomLeu3.chr7b C 0 C 0 s dasNov3.JH569232 1668387 1 + 5974691 T- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26287123 3 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e canFam3.chr19 43998455 19 - 53741614 I e otoGar3.GL873702 905752 1 - 3201129 I e aotNan1.NW_018507635v1 14878840 2 + 15034901 I e cebCap1.NW_016107420v1 4025723 2 - 6311556 I e saiBol1.JH378129 6469955 2 - 25294431 I e calJac3.chr3 129386107 2 - 190850796 I e colAng1.NW_012114544v1 5956055 2 + 8656713 I e manLeu1.NW_012103277v1 2724623 2 - 3013352 I e chlSab2.chr7 78958248 2 + 135778131 I e cerAty1.NW_012000798v1 4432980 2 - 9219162 I e macNem1.NW_012010911v1 34878790 2 - 40319822 I e macFas5.chr5 130887540 2 + 189454096 I e rheMac8.chr5 131368791 2 + 190429646 I a score=2859112.000000 s hg38.chr9_KI270719v1_random 5227 225 + 176845 ------------------TTGATGACCT----AAGCTAATTCCTATTTTAGAATGCTATGGACG-AATGAATCTCAAAACTTCTTT-TAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCAACC-AGGGGAGCTATGAAACAAACTCCCTATTTATTTCCAATCTAAACACATTTGATAAAACAGGCAGAGGAATTTTTTATCAGATCTGTAT------TTTAAATTTTCATGA-CTGT s panTro5.chr4 135032393 236 + 194502333 ------------------TTGATGACCTTTCTAAGCTAATTCCTATTTTAGAATGCTATGGATG-AATGAATCTCAAAACTTCTTT-TAACAAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCAACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAACAGGCAGATGAATTTTTTATCAGATCTGTATCTGTATTTTAAATTTTCATGA-CTGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 13095 230 - 70559 ------------------TTGATGACCTTTCTAAGCTAATTCCTATTTTAGAATGCTATGGACG-AATGAATCTCAAAACTTCTTT-TAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCAACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAACAGGCAGAGGAATTTTTTATCAGATCTGTAT------TTTAAATTTTCATGA-CTGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426342 231 - 115148730 ------------------TTGATGACCTTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AATGAATCTCAATACTTCTTTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCAACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAGTACATTTGATAAAACAGGCAGAGGAATTTTTTATCAGATCTGTAT------TTTAAATTTTCATGA-CTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131368793 230 + 190429646 ------------------TTGATGACCTTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AACGAATCTCAATACTCTTTTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCGACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAACAGGTAGAGGAA-TTTTTATCAGATCTTTAT------TTTAAATTTTCATGA-CTGT i rheMac8.chr5 I 2 C 0 s macFas5.chr5 130887542 230 + 189454096 ------------------TTGATGACCTTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AATGAATCTCAATACTCTTTTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCGACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAACAGGTAGAGGAA-TTTTTATCAGATCTTTAT------TTTAAATTTTCATGA-CTGT i macFas5.chr5 I 2 C 0 s macNem1.NW_012010911v1 34878792 230 - 40319822 ------------------TTGATGACCTTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AATGAATCTCAATACTCTTTTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCGACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAACAGGTAGAGGAA-TTTTTATCAGATCTTTAT------TTTAAATTTTCATGA-CTGT i macNem1.NW_012010911v1 I 2 C 0 s cerAty1.NW_012000798v1 4432982 230 - 9219162 ------------------TTGATGACATTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AATGAATCTCAATACTCTTTTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCCCCGACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAACAGGTAGAGGAA-TTTTTATCAGATCTTTAT------TTTAAATTTTCATGA-CTGT i cerAty1.NW_012000798v1 I 2 C 0 s chlSab2.chr7 78958250 230 + 135778131 ------------------TTGATGACCTTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AATGAATCTCAATACTCTTTTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCGACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAACAGGTAGAGGAA-TTTTTATCAGATCTTTAT------TTTAAATTTTCATGA-CTGT i chlSab2.chr7 I 2 C 0 s manLeu1.NW_012103277v1 2724625 230 - 3013352 ------------------TTGATGACCTTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AATGAATCTCAATACTCTTTTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCGACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAACAGGTAGAGGAA-TTTTTATCAGATCTTTAT------TTTAAATTTTCAGGA-CTGT i manLeu1.NW_012103277v1 I 2 C 0 s colAng1.NW_012114544v1 5956057 230 + 8656713 ------------------TTGATGACCTTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AATGAATCTCAATACTCTTTTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCGACCCAGGGGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAACAGGCAGAGGAA-TTTTTATCAGATCTTTAT------TTTAAATTTTCATGA-CTGT i colAng1.NW_012114544v1 I 2 C 0 s calJac3.chr3 129386109 230 - 190850796 ------------------TTGATAACCTTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AATGAATTTCAATGCTTCATTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCAGCCCAGGAGAGCTATGAAACAAACTCCCCATTTATTTCCAATCTAAACATATTTGATAAAATGGGCAGAGGAA-TTTTTATCAGATCTGTAT------TTTATATTTTCATGA-CTGT i calJac3.chr3 I 2 C 0 s saiBol1.JH378129 6469957 230 - 25294431 ------------------TTGATGACCTTTCTAAGCTAATTCCTGTTTTAGAATGCTATGGATG-AATGAATTTCAATGCTTCATGGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCAGCCCAGGAGAGCTATGAAATAAACTCCCCATTTATTTCCAATCTAAACGTATTTGAAAAAATGGGCAGAGGAA-TTTTTATCAGATCTGTAT------TTTATATTTTCATGA-CTGT i saiBol1.JH378129 I 2 C 0 s cebCap1.NW_016107420v1 4025725 230 - 6311556 ------------------TTGATAACCTTTCTAAGCTAATTCCTGTTTTAGAATGCAATGGATG-AATGAATTTCAATGCTTCATTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCAGCTCAGGAGAGCTATCAAACAAACTCCCCATTTATTTCCAATCTAAACATATTTGAAAAAATGGGCAGAGGAA-TCTTTATCAGATCTGTAT------TTTATATTTTCATGA-CTGT i cebCap1.NW_016107420v1 I 2 C 0 s aotNan1.NW_018507635v1 14878842 230 + 15034901 ------------------TTGATGACCTTTCTAAGCTAATTCCTGTTTTAGAATGCCATGGATG-AATGAATTTCAATTCTTCATTGTAACCAATTTATTTTATTCCATTTCCTAAGGAATAGAAAC--TTTTTACCTCCAACCCAGGAGAGTTATGAAACAAACTCCCCATTTATTTCCAATCTAAACACATTTGATAAAATGGGCAGAGGAA-TTTTTATCAGATCTGTAT------TTTATATTTTCATGA-CTGT i aotNan1.NW_018507635v1 I 2 C 0 s micMur3.chr14 26287126 230 - 93316391 ------------------TTGATGACCTTTCTAAACTAATTCCTGAGTTGGAATGCTATGGATG-AATAAATATCAATGCTTCTTTGTACTCAATTTATTTTATTCCATTTCCTAAAGAACAGAAAT--TTTTTACCTCCAACCCAGGAGAACTGTGAAATAAATACCCCATGTATATCCAATCTAAACATATTTGATAAAATATCCAGAGAGA-TTTTTGTCAGATATGTAT------TTTATATTTTCATGA-CTAT i micMur3.chr14 I 3 C 0 s otoGar3.GL873702 905753 227 - 3201129 ------------------TTGATAGCCTTGATAAACTAATTCCTGAGTTGGAATGCTATGGATGAAATAAATATCAATGCTTCTTTGTAAACAATTTATTTTATTCCGTTTCCT-AAGAATAGAAA-----TTTACCTTCAACCCAGGAGATTTGTGAAATATATACTCCATTTATAT-CAATCTAAACATATTTGATAAAATAGACAGAGAAA-ATTTTGTCAGATATGTAG------TTTATATTTTCATGAGCGAT i otoGar3.GL873702 I 1 I 148 s canFam3.chr19 43998474 211 - 53741614 ------------------TTGATGTCTTTC--AAGCTAATTTCTATCTTAGAATGCTATAGATG-AATAAATCTCAATACTTCCTTGTAACCAATATAATTTAG---GTCTTTTAAGGAACAGAAACCTTTTTTACATTGAATCCAGGAGAGCTGTGAAA---GTTCTCCATTTATTTCCAACCTCTCTATATTTGATAAAC-------AGGAA--TTTTATCAGATATGTAT-----------ATTTTCATGA-CTAT i canFam3.chr19 I 19 C 0 s dasNov3.JH569232 1668388 248 + 5974691 TTTTTTTTTTATTTCATTTTGGTGACCTTTCTAAGTTAATTCCAGTGTTGGAATGCTATGGATA-AATGTATATCAATGCCTCCTTATAACCAATATCTTTTAGTCCTTTTCCTAAGGAATAGAAAC--TTTCTACCTTCAATGCAGGAGAGCTATAAAATAAGTTTCCTATTTCTTTCCAATGTAAACATATTTGATAAAAGAGGCAGAGAAA-TCTAGATCAGACATACAC------CTTATCTTTTCATAA-CTAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=71105.000000 s hg38.chr9_KI270719v1_random 5452 5 + 176845 TGTTC s panTro5.chr4 135032629 5 + 194502333 TGTTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 13325 5 - 70559 TGTTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426573 5 - 115148730 TGTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369023 5 + 190429646 TGTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887772 5 + 189454096 TGTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879022 5 - 40319822 TGTTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433212 5 - 9219162 TGTTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78958480 5 + 135778131 TGTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724855 5 - 3013352 TGTTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5956287 5 + 8656713 TGTTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129386339 5 - 190850796 TGTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470187 5 - 25294431 GGTTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025955 5 - 6311556 TGTTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879072 5 + 15034901 TGTTC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26287356 5 - 93316391 TGTTT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 906128 5 - 3201129 TGTTC i otoGar3.GL873702 I 148 I 158 s canFam3.chr19 43998685 5 - 53741614 TGTTC i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1668636 5 + 5974691 TGTTA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=993216.000000 s hg38.chr9_KI270719v1_random 5457 107 + 176845 AAGAGTTTCCATTCTTCTTCATAAATATGTAGAGGCTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAATGATTTTAACTCATATT---TATAATACC----TTTTTTT s panTro5.chr4 135032634 107 + 194502333 AATTGTTTCCATTCTTCTTTATAAATATGTAGAGGCTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAATGATTTTAACTCATTTT---TATAATACC----TTTTTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 13330 106 - 70559 AAGAGTTTCCATTCTTCTTCATAAATATGTAGAGGCTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAATGATTTTAACTCAT-TT---TATAATACC----TTTTTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426578 107 - 115148730 AAGAGTTTCCATTCTTCTTTATAAATATGTAGAGGCTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAATGATTTTAACTCATTTT---TATAATACC----TTTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369028 103 + 190429646 AAGAGTTTCCA---TTCTTTATAAATATGTAGAGGTTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAACGATTTTAACTCTTTTT---TATAATACC-----TTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887777 101 + 189454096 AAGAGTTTCCA---TTCTTTATAAATATGTAGAGGTTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAACGATTTTAA--CTTTTT---TATAATACC-----TATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879027 103 - 40319822 AAGAGTTTCCA---TTCTTTATAAATATGTAGAGGTTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAACGATTTTAACTCTTTTT---TATAATACC-----TTTTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433217 103 - 9219162 AAGAGTTTCCA---TTCTTTATAAATATGTAGAGGTTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAACGATGTTAACTCTTTTT---TATAATACC-----TTTTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78958485 103 + 135778131 AAGAGTTTCCA---TTCTTTATAAATATGTAGAGGTTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAACGATTTTAACTCTTTTT---TATAATACC-----TTTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724860 103 - 3013352 AAGAGTTTCCA---TTCTTTATAAATATGTAGAGGTTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAACGATTTTAACTCTTTTT---TATAATACC-----TTTTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5956292 103 + 8656713 AAGAGTTTCCA---TTCTTTATAAATATGTAGAGGTTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAACGATTTTAACTCTTTTT---TATAATACC-----TTTTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129386344 106 - 190850796 AAAAGTTTCCATTGTTCTTTATAAATATTTAAAGGCTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------TTTTAAATGAT-TTAACTCATTTT---TATCATTCC----TTTTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470192 110 - 25294431 AAGAATTTCCATTCTTCTTTATAAATATTTAAAGGCTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAATGAT-TTAACTCATTTT---TATCATACCATTTTTTTTTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4025960 107 - 6311556 AAGAATTTCCATTCTTCTTTATAAATATTTAAAGGCTTAAAATT-TTTTCT--GAAAAA------TAAACTGCTA------CTTTAAATGAT-TTAACTCATTTT---TATCATACC--TTTTTTTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879077 107 + 15034901 AAGAGTTTCTATTCTTCTTTATAAATATTTAAAGATTTAAAATTCTTTTCT--GAAAAA------TAAACTGCTA------CTTTAAATCAT-TTAACTCATTTT---TATCATAGC---TATTTTTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26287361 101 - 93316391 AAAAGTTTCCATACTTTTTTAT--ATATTTAAAGGTTTAAATTTTTCT-----GAAAAA------TAAAGTGCTA------CTTTAAATGCTTTTAACCCATTTT---TATAATGCC-----TTTGTT i micMur3.chr14 C 0 I 5 s otoGar3.GL873702 906291 110 - 3201129 AAGAGCGTCCACATTTCTTTGT--ATATTTAAAGGTTCAATTTTTTTTTTTAGGAAAAAAATAACTAAAGTGCTA------CTTTAAATGCTTTTAACCCATTTT---TATAATGCT-----TTAA-- i otoGar3.GL873702 I 158 C 0 s canFam3.chr19 43998690 99 - 53741614 AAGAGTTTGCA---TACCT--TAAAGTTTTGCAAGTTTAAAGT--TTTACT--GAAAAA------GAAAGTGGCA------ATTTAAATGTTTTTAACTGATTGC---TTTTATATT-----TTTGTT i canFam3.chr19 C 0 I 3 s dasNov3.JH569232 1668641 95 + 5974691 --AATTTTGCA---------ACAATTTTTTATATCTTTAAA--TTTTCACT--GAAAAA------TAAAGTGCTACATTGTCTTTAAA-----TTAACCCACTTTATGTATCTTTGC-----TTTT-- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=141266.000000 s hg38.chr9_KI270719v1_random 5564 12 + 176845 ATTCTCTGATGA s panTro5.chr4 135032741 12 + 194502333 ATTCTCTGATGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 13436 12 - 70559 ATTCTCTGATGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426685 12 - 115148730 ATTCTCTGATGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369131 12 + 190429646 ATTCTCTGATGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887878 12 + 189454096 ATTCTCTGATGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879130 12 - 40319822 ATTCTCTGATGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433320 12 - 9219162 ATTCTCTGATGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78958588 12 + 135778131 ATTCTCTGATGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724963 12 - 3013352 ATTCTCTGATGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5956395 12 + 8656713 ATTCTCTGATGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129386450 12 - 190850796 ATTCTCTGATGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470302 12 - 25294431 ATTCTCTGATGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026067 12 - 6311556 ATTCTCTGATGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879184 12 + 15034901 ATTCTCTGATGA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 906401 7 - 3201129 ATGCTTT----- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43998792 12 - 53741614 ATTCCCTGAGGA i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1668736 12 + 5974691 ATTCTCTGAGGA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26287462 5 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=1761339.000000 s hg38.chr9_KI270719v1_random 5576 151 + 176845 TCTCTTG---CTGTTT-TTCTTTCTCTAGAAATGTTCTA--AGAATAAATTAGCTGATATACTAAGAAAGGTTCACAAAATGAGTCCTTC-ACCTATACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTATTTAAACTCTGAGATGT--- s panTro5.chr4 135032753 151 + 194502333 TCTCTTG---CGGTTT-TTCTTTCTCTAGAAATGTTCTA--AGAATAAATTAGCTGATATACTAAGAAAGGTTCACAAAATGAGTCCTTC-ACCTATACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTATTTAAACTCTGAGTTGT--- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 13448 150 - 70559 TCTCTTG---CTGTTT-TTCTTTCTCTAGAAATGTTCTA--AGAATAAATTAGCTGATATACTAAGAAAGGTTCACAAAATGAGTCCTTC-ACCT-TACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTATTTAAACTCTGAGTTGT--- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426697 150 - 115148730 TCTCTTG---CTGTTT-TTC-TTCTCTAGCAATAATCTA--AGAATAAATTAGCTGATATACTAAGAAAAGTTCACAAAATGAGTCCTTC-ACCTGTACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTATTAAAACTCTGAGTTGT--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369143 151 + 190429646 TCTCTTG---CTGTTT-TTCTTTCTCTAGAAATTATCTA--AGAATAAATTAGCTGATATACTAAGAAAGGTTCACAAAATGAGTCCTTT-ACCTATACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTTTTAAAACTCTGAGTTGT--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130887890 151 + 189454096 TCTCTTG---CTGTTT-TTCTTTCTCTAGAAATTATCTA--AGAATAAATTAGCTGATATACTAAGAAAGGTTCACAAAATGAGTCCTTT-ACCTATACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTTTTAAAACTCTGAGTTGT--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879142 151 - 40319822 TCTCTTG---CTGTTT-TTCTTTCTCTAGAAATTATCTA--AGAATAAATTAGCTGATATACTAAGAAAGGTTCACAAAATGAGTCCTTT-ACCTATACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTTTTAAAACTCTGAGTTGT--- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433332 151 - 9219162 TCTCTTG---CTGTTT-TTCTTTCTCTAGAAATTATCTA--AGAATAAATTAGCTGATATACTAAGAAAGGTTCACAAAATGAGTCCTTT-ACCTATACCGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTTTTAAAACTCTGAGTTGT--- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78958600 151 + 135778131 TCTCTTG---CTGTTT-TTCTTTCTCTAGAAATTATCTA--AGAATAAATTAGTTGATATACTAAGAAAGGTTCACAAAATGAGTCCTTT-ACCTATACAGCACCTCTTCTAAATAACAGAGATATTACAAATCCAATGTTTTAAAACTCTGAGTTGT--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2724975 151 - 3013352 TCTCTTG---CTGTTT-TTCTTTCTCTAGAAATTATCTA--AGAATAAATTAGCTGATATACTAAGAAAGGTTCACAAAATGAGTCCTTT-ACCTATACAGCACCTCTCCTAAATAACAGAGAGATTACAAATCCAATGTTTTAAAACTCTGAGTTGT--- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5956407 151 + 8656713 TCTCTTG---CTGTTT-TTCTTTCTCTAGAAATTATCTA--AGAATAAATTAGCTGATACACTAAGAAAGGTTCACAAAATGAGTCCTTC-ACCTGTACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTATTAAAACTCTGAGTTGT--- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129386462 151 - 190850796 TGTCTTG---CTGTTT-TCCTTTCTCTAGAAATGATACA--AGAATAAATTAGCTGATATACTAAGAAAGGTTAACATAATGAGTCCTTC-ACCTGTACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTACTAAAACTCGGAGTTGT--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470314 151 - 25294431 TCTCTTG---CTGTTT-TCCTTTCTCTAGAAATGATCCA--AGAATAAATTAGCTGATATACTAAGAAAGGTTCACATAATGAGTCCTTC-ACCTGTACAGCACCTCTTCTAAATAACAGAGAGATTACAAATCCAATGTACTAAAACTCTGAGTTGT--- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026079 147 - 6311556 TCTCTTG---CTGTTT-TCCTTTCTCCAGAAATGATCCA--AGAATAAATTAGCTGATACACT----AAGGTTCACATAATGAGTCCTTC-ACCTGTACAGCACCTCCTCTAAATAACAGTGAGATTACAAATCCAATGTACTAAAACTCTGAGTTGT--- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879196 150 + 15034901 TCTCTTG---CTGTTT-TCCTTTCTCTAGAAATGATCCA--AGAATAAATTAGTTGATATACTAAGAAAGGTTCACATAATGAGTCCTTC-ACCTGTACAGCACCTCTTCTAAATAACAGAGAGATTACAAAACT-CTGTACTAAAACTCTGAATTGT--- i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26287467 150 - 93316391 TCTCTTG---CTTTTT-TACTTTCTTTAGAAATGATCCA--AGAAGAAATTAGCTGATATACTAAGAAAGATTAACACAAAGAGTCCTTCAACCTATATAGCACCTCTTCTAAGTAGTAGCAAGGTTACAATTCCAATGTATTAAAACT--GAGTTGT--- i micMur3.chr14 I 5 I 22 s otoGar3.GL873702 906408 136 - 3201129 -----------TAACT-CCCTTTTTCTAAACATAA---G--AGAAGAAATTAGTTGACAT-TTTATAAAGATTAAC-CAAGCAGTCCTTC-ACCCGTACAGCACCTCTCCAAAGTAATGACAAGGTTACATTTCCAATGTATTAAAACT--GAATTGT--- i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 43998804 153 - 53741614 TTTCTGGTTTCTCCCC-TCCTTTCCCTA-AAATGATTCAAGAGAAAAAAATAGCTGATATACTAAGAAAAGTTAATGCA--CAGTCCTTC-ACCTGTACAGCACCTCTTAGAAATAATAGAGGGGTTGCAATTCCAATGTATTAAAAATCTGAGTTAT--- i canFam3.chr19 C 0 I 3 s dasNov3.JH569232 1668748 153 + 5974691 --TCTCG---TTTTTTATCCTTTCTCAATAAATGATTCA--AGTAGAAATTTCATGACATACTAACATAAATTAACACAAAGAGCCCCTC-ACCTATACAGCACTTCTGCAAAATAACAGAAAGGTGGAAATTCCAACGTATTAAAATTCTGAGTCATTAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=178124.000000 s hg38.chr9_KI270719v1_random 5727 16 + 176845 CTATATGTGTAGTGTT s panTro5.chr4 135032904 16 + 194502333 CTATATGTGTAGTGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 13598 16 - 70559 CTATATGTGTAGTGTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426847 16 - 115148730 CTATATGTGTAGTGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369294 16 + 190429646 CTATATGTGTAGTGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888041 16 + 189454096 CTATATGTGTAGTGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879293 16 - 40319822 CTATATGTGTAGTGTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433483 16 - 9219162 CTATATGTGTAGTGTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78958751 16 + 135778131 CTATATGTGTAGTGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725126 16 - 3013352 CTATATGTGTAGTGTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5956558 16 + 8656713 CAATATGTGTAGTGTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129386613 16 - 190850796 CCATATGTGTAGTGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470465 16 - 25294431 CTGTCTGTGTAGTGTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026226 16 - 6311556 CTGTATGTGTAGTGTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879346 16 + 15034901 CTGTATGTGTAGTGTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 906547 16 - 3201129 CTACAAGGATGGTATT i otoGar3.GL873702 I 3 C 0 s canFam3.chr19 43998960 16 - 53741614 CTATATGTATGCTGTT i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1668901 16 + 5974691 CTGTATGTTTGTTACT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26287617 22 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=4189925.000000 s hg38.chr9_KI270719v1_random 5743 411 + 176845 AAAAAATGTAGCTGTCAGTTTTAACAGCTTTTCCCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGATAGTGAAATGGCAGGAAAACATATCAAATACATAT--TTTTCCATTA-TACTATTCTGAGGACTGTAAAGTCTTACTCAATGTATATC-ACTTTTAATTTTTAGGATACATAGAAATATTTGCTAGTAGAAATAA-ATGGCAACTGTTTACTTGAAGATGGTTTA---GAAAGATGCTTTTCTCTTTTAATTTGAATTGCTACTGTAAATGTCATCACATGTATTTCAGTATTGTCTATGCCAACT----------TTGTACCT-------GAAAAACAGTAT-TATGAATTGGGCATTATATTCCATCTTCATAAATTAAAAAAGAAACATAATAACTAGCGAAG s panTro5.chr4 135032920 412 + 194502333 AAAAAATGTAGCTGTCAGTTTTAACAGCTTTTCTCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGATAGTGAAATGGCAGGAAAACATATCAAATACATAT--TTTTCCATTATTAGTATTCTGAGGACTGTAAAGTCTTACTCAATGTATATC-ACTTTTAATTTTTAGGACACATAGAAATATTTGCTAGTAGAAATAA-ATGGCAAGTGTTTACTTGAAGATGGTTTA---GAAAGACACTTTTCTCTTTTAATTTGAATTGCTACTGTAAATGTCATCACATGTATTTCAGTATTGTCTATGCCAAAT----------TTGTACCT-------GAAAAACAGTAT-TATGAATTGGGCATTATATTCCATCTTCATAAATTAAAAAAGAAACATAATAACTAGCGAAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 13614 410 - 70559 AAAAAATGTAGCTGTCAGTTTTAACAGCTTTTCCCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGATAGTGAAATGGCAGGAAAACATATCAAATACATAT--TTTTCCATTA-TAGTATTCTGAGGACTGTAAAGTCTTACTCAATGTATATC-ACTTTTAATTTTTAGGATACATAGAAATATTTGCTAGTAGAAATAA-ATGGCAAGTGTTTACTTGAAGATGGTTTA---GAAAGATGCTTTTCTCTTTTAATTTGAATTGCTACTGTAAATGTCATCACATGTATTTCAGTATTGTCTATGCCAACT----------TTGTACCT-------GAAAAACAGTAT-TATGAATTGGGCATTATATTCCATCTTCATAAATT-AAAAAGAAACATAATAACTAGTGAAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90426863 411 - 115148730 AAAAAATGTAGCTGTCAGTTTTAACAGCTTTTCTCCTCAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGATAGTGAAATGGCAGGAAAATATATCAAAGACATAT--TTTTCCATTA-TAGTATTCTGAGGATTGTAAAGTCTTACTCAAAGTATATC-ACTTTTAATTTTTAGGATACATAGAAATATTCGCTAGTAGAAATAA-ATGGTAAGTGTTTACTTGAAGATGGTTTA---GAAAGGCACTTTCCTGTTTTAATTTGAATTGCTACTGTAAATGTCATCACATGTATTTCAGTATTGTCTATGTCAACT----------TTGTACCT-------GAAAAACAGTAT-TATGAATTGGGCATTATATTCCATCTTCATAAATTAAAAAAGAAACATAATAACTAGTGAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369310 394 + 190429646 AAAAAATGTAGCTGTCAGTTTTAATAGCTTTTCTCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGACAGTGAAATTGCAGGAAAACATATCAAAGACATA---TTTTCCATTA-TAGTATTCTAAGGATTGTAAATTCTTACTCAATGTATATC-ACCTTTAATTTTTGGGATAC----------------GTAGAAATAA-ATGGCAAGTGTTTACTTGAAGATGGCTTA---GAAAGATACTTTTCTCTTTTAATTTGAATTGCTATGGTAAATGTCATCACAGGTATTTCAGTATTGTCTATGCCAGCT----------TTGTACCT-------GAAAAGCAGTAT-TATGAATTTGACATTATATTCCATCTTCATAAATTAAAAAAGTAACATAATAACTAGTGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888057 394 + 189454096 AAAAAATGTAGCTGTCAGTTTTAATAGCTTTTCTCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGGCAGTGAAATTGCAGGAAAACATATCAAAGACATA---TTTTCCATTA-TAGTATTCTGAGGATTGTAAATTCTTACTCAATGTATATC-ACATTTAATTTTTGGGATAT----------------GTAGAAATAA-ATGGCAAGTGTTTACTTGAAGATGGCTTA---GAAAGATACTTTTCTCTTTTAATTTGAATTGCTACGGTAAATGTCATCACATGTATTTCAGTATTGTCTATGCCAGCT----------TTGTACCT-------GAAAAGCAGTAT-TATGAATTTGACATTATATTCCATCTTCATAAATTAAAAAAGTAACATAATAACTAGTGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879309 394 - 40319822 AAAAAATGTAGCTGTCAGTTTTAATAGCTTTTCTCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGACAGTGAAATTGCAGGAAAACATATCAAAGACATA---TTTTCCATTA-TAGTATTCTGAGGATTGTAAATTCTTACTCAATGTATATC-ACCTTTAATTTTTGGGATAC----------------GTAGAAATAA-ATGGCAAGTGTTTACTTGAAGATGGCTTA---GAAAGATACTTTTCTCTTTTAATTTGAATTGCTACGGTAAATGTCATCACATGTATTTCAGTATTGTCTATGCCAGCT----------TTGTACCT-------GAAAAGCAGTAT-TATGAATTTGACATTATATTCCATCTTCATAAATTAAAAAAGTAACATAATAACTAGTGAAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433499 394 - 9219162 AAAAAATGTAGCTGTCAGTTTTAATAGCTTTTCTCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGACAGTGAAATTGCAGGAAAACATATCAAAGACATA---TTTTCCATTA-TAGTATTCTGAGGATTGTAAAGTCTTACTCAATGTATATC-ACCTTTAATTTTTGGGATAC----------------GTAGAAATAA-ATAGCAAGTGTTTACTTGAAGATGGCTTA---GAAAGATACTTTTCTCTTTTAATTTGAATTGCTACGGTAAATATCATCACATGTATTTCAGTATTGTCTATGCCAGCT----------TTGTACCT-------GAAAAGCAGTAT-TATGAATTTGACATTATATTCCATCTTCATAAATTAAAAAAGTAACATAATAACTAGTGAAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78958767 394 + 135778131 AAAAAATATAGCTGTCAGTTTTAATAGCTTTTCTCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTGGACAGTGAAATTGCAGGAAAACATATCAAAGACATA---TTTTCCATTG-TAGTATTCTGAGGATTGTAAAGTCTTACACAATGTATATT-ACCTTTAATTTTTAGGATAC----------------GTAGAAATAA-ATGGCAAGTGTTTACTTGAAGATGGCTTA---GAAAGATACTTTTCTCTTTTAATTTGAATTGCTACGGTAAATGTCATCACATGTATTTCAGTATTGTCTATGCCAGCT----------TTGTACCT-------GAAAAGCAGTAT-TATGAATTTGACATTATATTCCATCTTCATAAATTAAAAAAGTAACATAATAACTAGTGAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725142 394 - 3013352 AAGAAATGTAGCTGTCAGTTTTAATAGCTTTTCTCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGACAGTGAAATTGCAGGAAAACATATCAAAGACATA---TTTTCCATTA-TAGTATTCTGAGGATTGTAAAGTCTTACTCAATGTATATC-ACCTTTAATTTTTGGGATAC----------------GTAGAAATAA-ATGGCAAGTGTTTACTTGAAGATGGCTTA---GAAAGATACTTTTCTCTTTTAATTTGAATTGCTACGGTGAATATCATCACATGTATTTCAGTATTGTCTATGCCAGCT----------TTGTACCT-------GAAAAGCAGTAT-TATGAATTTGACATTATATTCCATCTTCATAAATTAAAAAAGTAACATAATAACTAGTGAAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5956574 373 + 8656713 A---------------------AACAGCTTTTCTCCTGAGA------TTTCAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGACAGTGAAATTGCAGGAAAGCATATCAAAGACATA---TTTTCCATAA-TAGTATTCTGAGGATTGTAAAGTCTTACTCAATGTATATC-ACCTTTAATTTTTAGGATAC----------------GTAGAAATAA-ATGGCAAGTGTTTACTTGAAGATGTCTTA---GAAAGACACTTTTTTCTTTTAATTTGAATTGCTACTGTAAATGTCATCACATGTATTTCAGTATTGTCTATGCCAACT----------TTGTACCT-------GAAAAGCAGTAT-TATGAATTGGGCATTATATTCCATATTCATAAATTTAAAAAGTAACATAAAAACTAGTGAAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129386629 414 - 190850796 AAAAAATGTAGCTGTCAGTTTTAATAACTTTTCTTCTGAGAAAATGGCTTTAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGATACTGAAATGGCAGGAAAACATATGAAAGATATAT--TATTCTATTA-CAATATTCTGAGTATTCTAAAGTCTTACTCAATGTGTATC-ACCTTTAATTTTTAGGATACATAGAAATATTTGCTAGAAGAAATAA-ATGGCAAATGCTTACTTGAAGATGGTTTACTTG-AAGACACTTTTCTCTTTTAATTTGAATTGCTACTGTAAATGGCATCACATGTATTTTAGCATTGTCTATGTCAACT----------TTGTACCA-------GAAAAACAGTAT-TAT-AATGGAGAATTACATTCCATCTTCATAAA-TTAAAAAGAAAC---ATAATTTGTGAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470481 411 - 25294431 AAAAAATGTAGCTGTCAGTTTTAACATCTTTTCTTCTGAGAAAATGGCTTTAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGATACTGAAATGGCTGGAAAACATATCAAAGATATAT--TTTTCTATTA-CAGTATTTTGAG-----TAAAGTCTTATTCAATGTGTATC-ACTTTTAATTTTTAGGATACATAGAAATATTTACTAGAAGAAATAA-ATGGCAAGTGTTTCCTCGAAGATGGTTTG---G-AAGACACTTTTCTCTTTTAATTTGAATTGCTATTGTAAATGTCATCACATGTATTTTAGCATTGTCTATGTCAACT----------TTGTACCA-------GAAAAACAGTAT-TATAAACGGGGCATTACATTCCATCTTCATAAATTTAAAAGGAAACCTAATAATTTGTGAAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026242 411 - 6311556 AAAAAATGTAGCTGTCAGTTTTAACAGCTTTTCTTCTGAGAAAATGGCTTTAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGATACTGAAACGGCAGGAAAACATATCAAAGATATAT--CTTTCTATTA-CAGTATTTTGAG-----TAAAGTCTTACTCAATATGTATC-ACCTTTAATTTTTAGGATACATAGAAATATTTGCTAGAAGAAATAA-ATGGCAAGTGTTTACTTGAAGATGGTTTA---G-AAGACACTTTTCTCTTTTAATTTGAATTGCTGCTGTAAATGTCATCACATGTATTTTAGCATTGTCTATGTCAACT----------TTGTACCA-------GAAAAACAGTAT-TATGAATGGGGCATTACATTCCATCTTCATAAATTAAAAAAGAAACATAATAATTTGTGAAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879362 408 + 15034901 AAAAAATGTATCTGTCAGTTTTAACAGCTTTTCTTCTGAGAAAATGGCTTTAGTGGCTAGCTAATGATCTC---TTT-TAAGGATTAGGACAATTTCTAGATACTGAAATGGCAGGAAAACACATCAAAGATAAAT--TTTTCCATTA-CAGTATTCT--------AAAAGTCTTACTCAATGTATATC-ACCTTTAATTTTTAGTATACATAGAAATATTTGCTAGAAGAAATAA-ATGGCAAGTGTTTACCTGAAGATGGTTTA---G-AAGACACTTTTCTCTTTTAATTTGAATTGCTACTGTAAATGTCATCACATGTATTTTATCATTGTCTATGTCAACT----------TTGTACCA-------GAAAAACAGTAT-TATGAATGGAGCATTACATTCCATCTTCATAAATTAAAAAAGAAACACAATAATTTGTGAAG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26287639 414 - 93316391 AAAAAATGTAGGTATCAGTGTTAACAGCTTTTCTCCTGAGA------TTTTAGTGGCTAGCTAATAATCTC--TTTT-TAAGGATTAGGACAATTTCTAGATAGAGAAATGACACAAAAACATATCAAAGACATAG--TTTTCCTTAC-TAATATTCTGAGGATTGTAAAGTCTTACTCATAGCATATCAACCTATAATTTTTAGGACACATAGAAATATTTTGTAGTAGAAATAA-GTGGAATACACTTATTTGAAGATATCTTA---GAAAGACATTTTTGTCTTTTAATTAGATTTTTTACTGCAAATGTTAGCACTTGTATTTCAGTATTGTCTATGTCAAGT----------TTGTACCT-------GAAAAACAGTGTTTATGAATTGGATACTAAGTTCAGTCTTTATAGATTAAAAAAGAAACATGATAATTAGTGAAG i micMur3.chr14 I 22 I 234 s otoGar3.GL873702 906563 396 - 3201129 GAAAAATGTAGCTATCATTTTTAACAGCTTTTCTCCTGAGA------TTGTACTGGCTAGCTAATAGTCAC--TTTT-TAAGGAGTAAGACAATGTGTAGGTAG-----TGACATAAAAACCTATCAAGGACATAG--TTTTCTTTAC-TAATATTCTCAGAAATTTAAAGTATT----ATAGCATATCAAGTTATAATTATTAAAATGTATAGAAATAT-------TAGAAATAA-ATGTAAAGGGCTTATT--AAGATATCTTT---GAAAGACATTTTTGCCTTTTAATGAGATTTTCTACTGCAAATGTTATCACCTGTATTTCAGTATTGTCTATGTCAAGT----------TTGTACCA-------GAAAATAAGAATCTATGAATTGGATACTAAATTTGATCTTTGTACATTAAAAAATGAACATGATAATTAGTAAAG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43998976 313 - 53741614 -GAAAATGGAGCTAGCAATTCTAAG---TTTTTCTCTGAGA------TTTCAGTAGCATGTTAATAGTCTC---TTTATAAGGATTAGGAGAATTTTT-GATAGAAGAAT----GAAAAACATATCAAGGATATATACTTTTTCTTTT-TTGTATTAT---------------------------TATC-A--------------------------------------------------------------TGGTGATGCCTTT---AAAAGAC----TTTTTTTTTAATTTGATTTGTTATCACAAACATAATCACATATATTTTGGTATTGCTAAAGTAACGT----------TAGCACAT-------GAAAAATCATGTCTAATAACTGAGAACTAGGTACAGTCTTTATAGTTTTTTAAA-AACCATAGTAATTAGTAGAG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1668917 395 + 5974691 GGAAAGTGTAGTAATCAGTATTAACAACTTTTCTCTTGAGA------TTGCAGTTTCTAGCTAGTAATCTCCCTTTT-AAAGGATT-----------TAGATAGAGGAATGGAATGAAAA---ATCAAATA-------TTTGTCTTTA-TAGTACTC-----ACTGTA--------------GCACATCAACCTATAAATTTTAAGTTACACAGAAGTATTCCCTAATAGAAGTAACATGGCATGTGCTTGTTTCACAATGCTTTA---GAAAGACACTTTTCTCTTTTTATTTGGTTTGCAAATGCAGATTTTATCACATATATTTCAATATTGTTTAGTAGAGTTAATAATTTTCTTGTACTTATACTTAGAAAAACAGTATCTGTAATTTGGGTACTATGCTCAATCTTTATAGAAT-AAAAAGACCCATGATAACTGGTAAAA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=655291.000000 s hg38.chr9_KI270719v1_random 6154 69 + 176845 TGGAATGAGGAAGGTGT--GGGGAGA-C--ACAGAATTTTTCAAAAGTAGTAACAAATTCAAGCATGTATT----AGC s panTro5.chr4 135033332 73 + 194502333 TGGAATGAGGAAGGTGT--GGGGAGA-C--ACAGAATTTTTCAAAAGTAGTAACAAATTCAAGCATGTATTAGTCAGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14024 69 - 70559 TGGAATGAGGAAGGTGT--GGGGAGA-C--ACAGAATTTTTCAAAAGTAGTAACAAATTCAAGCATGTATT----AGC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427274 70 - 115148730 TGGAATGAGGAGGGTGT--GGGGAGA-C--ACAGAATTTTTCAAA---AGTAATAAATTCAGTCATGTATTAGGCAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369704 73 + 190429646 TGGAATGAGGAGGGTGT--GGGGAGA-C--ACAGAATTTTTCAAAATTAATGACAAATTCAGGTATGTATTAGGCAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888451 73 + 189454096 TGGAATGAGGAGGGTGT--GGGGAGA-C--ACAGAATTTTTCAAAATTAATGACAAATTCAGGTATGTATTAGGCAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879703 73 - 40319822 TGGAATGAGGAGGGTGT--GGGGAGA-C--ACAGAATTTTTCAAAATTAATGACAAATTCAGGTATGTATTAGGCAGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433893 73 - 9219162 TGGAATGAGGAGGGTGT--GGGGAGA-C--ACAGAATTTTTCAAAATTAATGACAAATTCAGGTATGTATTAGGCAGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959161 73 + 135778131 TGGAATGAGGAGGGTGT--GGGGAGA-C--ACAGAATTTTTCAAAATTAATGACAAATTCAGGTATGTATTAGGCAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725536 73 - 3013352 TGGAATGAGGAGGGTGT--GGGGAGA-C--ACAGAATTTTTCAAAATTAATGACAAATTCAAGTATGTATTAGGCAGC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5956947 73 + 8656713 TGGAATGAGGAGGGTGT--GGGGAGA-C--ACAAAATTTTTCAAAAGTAATGACAAATTCAGGTATGTACTAGGCGGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387043 69 - 190850796 TGGAATGAGGAGGATGT--GGGGAGA-C--ACATAATTTCTCAAAAGTAATAACAAATTCAAGTGCGTATTAGC---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470892 69 - 25294431 TGGAATGAGGAAGGTGT--GGGGAGA-C--ACAAAATTTGTCAAAAGTAATAACAAATTCAAGCCTGTATTAGC---- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026653 69 - 6311556 TGGAATGAGGAGGATGT--GGGGAGA-C--ACAGAATTTTTCAAAAGTAATAACAAATTCAAGCGTGTATTAGC---- i cebCap1.NW_016107420v1 C 0 I 12 s aotNan1.NW_018507635v1 14879770 69 + 15034901 TGGAATGAGAAGGATGT--GGGGAGA-C--ACAAAATCTTTCAAAAGTAATAACAAATTCAAGTGTGTATTAGC---- i aotNan1.NW_018507635v1 C 0 I 11 s otoGar3.GL873702 906959 75 - 3201129 TAGAATGCAGATTACAT--TGGAGGA-CAAATAGGAAATATCAATAGTAATAATAGATTGAGGTATACATTAGGAAGC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43999289 71 - 53741614 TAGAATGGAGAGGGAGTTGGAGGAGG-T--ATAACACTTTCCAAAAATGGCAACAGATTTAGACATGCATTAAC---- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1669312 74 + 5974691 TAGAATGGAGGGGTAAT--TGGAAGATC--ATCACACTATCTAAACATAATAACAGAGTCACATATGTATTAGGCAGC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26288053 234 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=54421.000000 s hg38.chr9_KI270719v1_random 6223 10 + 176845 TTAATATATC s panTro5.chr4 135033405 10 + 194502333 TTAACATATC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14093 10 - 70559 TTAATATATC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427344 10 - 115148730 TTAACATATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369777 10 + 190429646 TTAGCATATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888524 10 + 189454096 TTAGCATATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879776 10 - 40319822 TTAGCATATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433966 10 - 9219162 TTAGCATATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959234 10 + 135778131 TTAGCATATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725609 10 - 3013352 TTAGCATATA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957020 10 + 8656713 TTAGCATATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387112 9 - 190850796 -TAGCCTAAC i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6470961 9 - 25294431 -TAGCGTAAC i saiBol1.JH378129 C 0 I 2 s otoGar3.GL873702 907034 10 - 3201129 CTTATTTATA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43999360 10 - 53741614 CTATCATAGT i canFam3.chr19 C 0 I 2 s dasNov3.JH569232 1669386 10 + 5974691 CTAACATATT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26288053 234 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e aotNan1.NW_018507635v1 14879839 11 + 15034901 I e cebCap1.NW_016107420v1 4026722 12 - 6311556 I a score=60046.000000 s hg38.chr9_KI270719v1_random 6233 6 + 176845 ATAACT s panTro5.chr4 135033415 6 + 194502333 ATAACT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14103 6 - 70559 ATAACT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427354 6 - 115148730 ATAACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369787 6 + 190429646 ATAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888534 6 + 189454096 ATAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879786 6 - 40319822 ATAACT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433976 6 - 9219162 ATAACT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959244 6 + 135778131 ATAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725619 6 - 3013352 ATAACT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957030 6 + 8656713 ATAACT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387123 6 - 190850796 ATAGCT i calJac3.chr3 I 2 C 0 s saiBol1.JH378129 6470972 6 - 25294431 ATATCT i saiBol1.JH378129 I 2 C 0 s aotNan1.NW_018507635v1 14879850 6 + 15034901 ATAACT i aotNan1.NW_018507635v1 I 11 C 0 s otoGar3.GL873702 907044 6 - 3201129 CTAACT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43999372 6 - 53741614 ATGATT i canFam3.chr19 I 2 I 7 s dasNov3.JH569232 1669396 6 + 5974691 CTAACT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26288053 234 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I e cebCap1.NW_016107420v1 4026722 12 - 6311556 I a score=143321.000000 s hg38.chr9_KI270719v1_random 6239 15 + 176845 ----TAAATGATTT----AAATT s panTro5.chr4 135033421 15 + 194502333 ----TAAATGATTT----AAATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14109 15 - 70559 ----TAAATGATTT----AAATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427360 15 - 115148730 ----TAAATGATTT----GGATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369793 15 + 190429646 ----TAAATGATTT----AAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888540 15 + 189454096 ----TAAATGATTT----AAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879792 15 - 40319822 ----TAAACGATTT----AAATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433982 15 - 9219162 ----TAAATGATTT----AAATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959250 15 + 135778131 ----TAAATGATTT----AAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725625 15 - 3013352 ----TAAATGATTT----AAATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957036 15 + 8656713 ----TAAATGATTT----AAATC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387129 15 - 190850796 ----TAAATGATTT----AAATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470978 15 - 25294431 ----TAAATGATTT----AAATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026734 15 - 6311556 ----TAAATGATTT----AAATT i cebCap1.NW_016107420v1 I 12 C 0 s aotNan1.NW_018507635v1 14879856 15 + 15034901 ----TAAATGATTT----AAATT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 907050 13 - 3201129 ----TAAATGGTTT----AAA-- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 43999385 19 - 53741614 ----CAAAttatttattgagatt i canFam3.chr19 I 7 I 29 s dasNov3.JH569232 1669402 13 + 5974691 TAATGAAATGATT---------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26288053 234 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 180933 10566 - 1108378 I a score=14286.000000 s hg38.chr9_KI270719v1_random 6254 2 + 176845 AG s panTro5.chr4 135033436 2 + 194502333 AG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14124 2 - 70559 AG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427375 2 - 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369808 2 + 190429646 AG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888555 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879807 2 - 40319822 AG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433997 2 - 9219162 AG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959265 2 + 135778131 AG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725640 2 - 3013352 AG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957051 2 + 8656713 AG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387144 2 - 190850796 AG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470993 2 - 25294431 AG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026749 2 - 6311556 AG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879871 2 + 15034901 AG i aotNan1.NW_018507635v1 C 0 C 0 s tarSyr2.KE944182v1 191499 1 - 1108378 A- i tarSyr2.KE944182v1 I 10566 I 49 s canFam3.chr19 43999433 2 - 53741614 at i canFam3.chr19 I 29 C 0 e micMur3.chr14 26288053 234 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1669415 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e otoGar3.GL873702 907063 0 - 3201129 C a score=109088.000000 s hg38.chr9_KI270719v1_random 6256 12 + 176845 GTATATGTTTAT s panTro5.chr4 135033438 12 + 194502333 GTATATGTTTAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14126 12 - 70559 GTATATGTTTAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427377 12 - 115148730 GTACATGTTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369810 12 + 190429646 GTATATGTTTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888557 12 + 189454096 GTATATGTTTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879809 12 - 40319822 GTATATGTTTAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4433999 12 - 9219162 GTATATGTTTAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959267 12 + 135778131 GTATATGTTTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725642 12 - 3013352 GTATATGTTTAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957053 12 + 8656713 GTATATGTTTAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387146 12 - 190850796 GTATACGTTTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6470995 12 - 25294431 GTATACATTTAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026751 12 - 6311556 GTATACGTTTAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879873 12 + 15034901 GTATACGTTTAT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 43999435 12 - 53741614 ttatttatttat i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1669415 5 + 5974691 -------TTTGT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26288053 234 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191500 49 - 1108378 I e otoGar3.GL873702 907063 0 - 3201129 C a score=2603.000000 s hg38.chr9_KI270719v1_random 6268 2 + 176845 AA s panTro5.chr4 135033450 2 + 194502333 AT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14138 2 - 70559 AC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427389 2 - 115148730 AC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369822 2 + 190429646 AC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888569 2 + 189454096 AC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879821 2 - 40319822 AC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434011 2 - 9219162 AC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959279 2 + 135778131 AC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725654 2 - 3013352 AC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957065 2 + 8656713 AC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387158 2 - 190850796 AC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471007 2 - 25294431 AT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026763 2 - 6311556 AT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879885 2 + 15034901 AC i aotNan1.NW_018507635v1 C 0 C 0 s tarSyr2.KE944182v1 191549 1 - 1108378 a- i tarSyr2.KE944182v1 I 49 I 8216 s canFam3.chr19 43999448 1 - 53741614 a- i canFam3.chr19 I 1 I 53 e micMur3.chr14 26288053 234 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1669420 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e otoGar3.GL873702 907063 0 - 3201129 C a score=565679.000000 s hg38.chr9_KI270719v1_random 6270 63 + 176845 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAGTACCAACAAAGAATGC--------CCTTCCATAT s panTro5.chr4 135033452 63 + 194502333 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAATACCAACAAAGAATGC--------CCTTCCATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14140 63 - 70559 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAGTACCAACAAAGAATGC--------CCTTCCATAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427391 63 - 115148730 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAATACTAACCAAGAATAC--------CCTTCTATGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369824 63 + 190429646 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAATACCTACAAAGAATAC--------CTTTCCATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888571 63 + 189454096 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAATACCTACAAAGAATAC--------CTTTCCATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879823 63 - 40319822 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAATACCTACAAAGAATAC--------CTTTCCATGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434013 63 - 9219162 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAATACCAACAAAGAATAC--------CTTTCCATGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959281 63 + 135778131 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAATACCAACAAAGAATAC--------CTTTCTATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725656 63 - 3013352 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAATACCAACAAAGAATAC--------CTTTCCATGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957067 63 + 8656713 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTGATTCTAACCTCATCAAATACCAACAAAGAATAC--------CTTTCCATGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387160 63 - 190850796 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCGCATCAAATACCAACAAAAATTAC--------CCCTCCATGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471009 63 - 25294431 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAAGTCTCATGTCATCAAATACCAATAAGAAATAC--------TCTTCCACGT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026765 62 - 6311556 CAATA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCGTCAAATACCAAGAAAAA-TCC--------CCTTCCATGT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879887 63 + 15034901 CAGTA-------------------------------------------------------------------------------AGTTTTAAATTCTTAATTCTAACCTCATCAAATACCAACAAAGAATAC--------CCTTCCATGT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 907063 57 - 3201129 --------------------------------------------------------------------------------------TTTTAAATTCTTAATTGTAAGCCCTTCAAATACAAATAAGACATAC-------TCCTTCTATGT i otoGar3.GL873702 C 0 I 25 s canFam3.chr19 43999502 126 - 53741614 caacaccgtactgtatcgcaggacactaaaaccatcacctaagccaaagtcagacacttaaactgagctacccatgcaccccTCAATTTCAAATTCTTAATTCTAAAC----------------AATAATGC--------ACTCATATAC i canFam3.chr19 I 53 I 10 s dasNov3.JH569232 1669420 64 + 5974691 --------------------------------------------------------------------------------------TTTCAAGTTGTTAATTCTAAACTATTCATAAACCAATAAAGTATATCTATACCTCTCTCCAGGT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26288053 234 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I a score=391174.000000 s hg38.chr9_KI270719v1_random 6333 32 + 176845 TAAT-ACACTTTGGGAATTAAGATAAAGTATAT s panTro5.chr4 135033515 32 + 194502333 TAAT-ACACTTTGGGAATTAAGATAAAGTATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14203 30 - 70559 TAAT-ACACTTTGGGAATTAAGA-AAAGT-TAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427454 32 - 115148730 TAAT-ATACTTTGGGAATTAAGATAAAGTTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369887 32 + 190429646 TAAT-ACATTTTGGGAATTAAGATAAAGTATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888634 32 + 189454096 TAAT-ACATTTTGGGAATTAAGATAAAGTATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879886 32 - 40319822 TAAT-ACATTTTGGGAATTAAGATAAAGTATAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434076 32 - 9219162 TAAT-ACATTTTGGGAATTAAGATAAAGTATAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959344 32 + 135778131 TAAT-ACATTTTGGGAATTAAGATAAAGTATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725719 32 - 3013352 TAAT-ACATTTTGGGAATTAAGATAAAGTATAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957130 33 + 8656713 TGATAACATTTTGGGAATTAAGATAAAGTATAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387223 32 - 190850796 CAAT-ATATTTTGGGAATTAAGATAAAGTATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471072 32 - 25294431 CAAT-ATATTTTGGGAATTAAGAGAAAGTATAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026827 32 - 6311556 CAAT-ATATTTTGGAAATTAAGATAAAGTATAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879950 32 + 15034901 CAAT-ATATTTTGGGAATTAAGATAAAGTATAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26288287 32 - 93316391 TAAT-ATACTTTGGGAATTAAGATAAAATATAT i micMur3.chr14 I 234 I 23 s otoGar3.GL873702 907145 32 - 3201129 TTAT-ATACTTTGGaaattaatttacaatatat i otoGar3.GL873702 I 25 C 0 s canFam3.chr19 43999638 32 - 53741614 TAAT-ATATTTTTGAAATTAAGATGAAGTATAT i canFam3.chr19 I 10 C 0 s dasNov3.JH569232 1669484 32 + 5974691 TAAG-ATACTTTGGGATTTAAGAAGAAATGCAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I a score=196905.000000 s hg38.chr9_KI270719v1_random 6365 20 + 176845 GTAATTAAATCATCAAACTC s panTro5.chr4 135033547 20 + 194502333 GTAATTAAATCATCAAACTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14233 20 - 70559 GTAATTAAATCATCAAACTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427486 20 - 115148730 GTAATTAAATCATCAAACTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369919 20 + 190429646 GTAATTAAACAGTCAAACTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888666 20 + 189454096 GTAATTAAACAGTCAAACTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879918 20 - 40319822 GTAATTAAACAGTCAAACTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434108 20 - 9219162 GTAATTAAACAGTCAAACTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959376 20 + 135778131 GTAATTAAACAGTCAAACTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725751 20 - 3013352 GTAATTAAACAGTCAAACTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957163 20 + 8656713 GTAATTAAACAGTCAAACTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387255 20 - 190850796 GCAATTAAACAACCAAACTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471104 20 - 25294431 GCAATTAAACAACGAAACTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026859 20 - 6311556 GCAATTAAACAACCAAACTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14879982 20 + 15034901 GCAATTAAACAACCAAACTC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 907177 20 - 3201129 ataaataaacaattaaaatt i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 43999670 20 - 53741614 ATAAATACACAACCAAGCTT i canFam3.chr19 C 0 I 6 s dasNov3.JH569232 1669516 20 + 5974691 ATAAATAAACCATCAAGTGC i dasNov3.JH569232 C 0 I 1 e micMur3.chr14 26288319 23 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I a score=3183189.000000 s hg38.chr9_KI270719v1_random 6385 280 + 176845 CTTTTG-----TTGTTTAGCAGGTAGTTTGATATAATAAGAGAAATTGTGTTCTCATTATATATTTGTCAC--AATGAATGAAtgtaaaaccttaatcaggctatctgacttcttttagtgacatta-----ccctt-tttg-caaccaacacatcaaattagtaatatttatcctacaaaaataatgtgaagataaatgagataacat--------atataaTAGTCAC-AAATACTTATTGAATAAAGCTGTTTTTATTTATATATTTCTATGTACTTACTAGATATGTTCTTATTAAATA s panTro5.chr4 135033567 282 + 194502333 CTTTTG-----TTGTTTagcaggtagtttgatataataagataaattgtgttctcattatatatttgtcacttaatgaatgaatgtaaaaccttaatcaggctatctgacttcttttagtgacatta-----ccctt-tttg-caaccaacacatcaaattagtaatatttatcctacaaaaataatgtgaagataaatgagataagat--------atataaTAGTCAC-AAATACTTATTGAATAAAGCTGTTTTTATTTATATATTTCTATGTACTTACTAGATATGTTCTTATTAAATA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14253 280 - 70559 CTTTTG-----TTGTTTAGCAGGTAGTTTGATATAATAAGAGAAATTGTGTTCTCATTATATATTTGTCAC--AATGAATGAAtgtaaaaccttaatcaggctatctgacttcttttagtgacatta-----ccctt-tttg-caaccaacacatcaaattagtaatatttatcctacaaaaataatgtgaagataaatgagataagat--------atataaTAGTCAC-AAATACTTATTGAATAAAGCTGTTTTTATTTATATATTTCTATGTACTTACTAGATATGTTCTTATTAAATA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427506 283 - 115148730 CTTTTG-----TTGTTTAGCAGGTAGTTTGATATAATAAGAGAAATtgcgttctcattatatatttgtcacctaatgaatgaatgtaaaaccttaatcaggctatctgacttcttttagtgacatta-----ccctt-tttg-caaccaacacatcaaattagaaatatttatcctacaaaaataatgtgaagataaatgagataagat--------atataatagtcactcaatacTTACTGAATAAAGCTGTTTTTATTTATATATATCTATGTACTTACTAGATATGTTCTTGTTAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131369939 283 + 190429646 CTTTTG-----TTGTTTAGTAGGTAGTTTGATATAATAAAAGAAATtgtgttctcattatatatttgtcacttaatgaatgaatgtaaaatcttaatcaggatatctgacttcttttagtgacatta-----ccctt-tttg-caactaatacatcaaattaataatatttatcctacaaaaataatgtgaagataaatgagatgaaat--------atataaTAGTCACTCAATATTTATTGAATTAAGCTGTttttatttatatatttctatatacttactagaaatgttcttattaaata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888686 283 + 189454096 CTTTTG-----TTGTTTAGTAGGTAGTTTGATATAATAAAAGAAATTGTGTTCTCATTATATATTTGTCACTTAATGAATGAATGTAAAATCTTAATCAGGATATCTGACTTCTTTTAGTGACATTA-----CCCTT-TTTG-CAACTAATACATCAAATTAATAATATTTATCCTACAAAAATAATGTGAAGATAAATGAGATGAAAT--------ATATAATAGTCACTCAATATTTATTGAATTAAGCTGTTTTTATTTATATATTTCTATATACTTACTAGAAATGTTCTTATTAAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34879938 283 - 40319822 CTCTTG-----TTGTTTAGTAGGTAGTTTGATATAACAAAAGAAATtgtgttctcattatatatttgtcacttaatgaatgaatgtaaaatcttaatcaggatatctgacttcttttagtgacatta-----ccctt-tttg-caactaatacatcaaattaataatatttatcctacaaaaataatgtgaagataaatgagatgaaat--------atataaTAGTCACTCAATATTTATTGAATTAAGCTGTttttatttatatatttctatatacttactagaaatgttcttattaaata i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434128 283 - 9219162 CTTTTG-----TTGTTTAGTAGGTAGTTTGATATAATAAAAGAAATtgtgttctcattatatatttgtcacttaatgaatgaatgtaaaaccttaatcaggatatctgacttcttttagtgacatta-----ccctt-tttg-caactaatacatcaaattaataatatttatcctacaaaaataatgtgaagataaatgagatgaaat--------atataaTAGTCACTCAATATTGATTGAATTAAGCTGTttttatttatatatttctatatacttactagaaatgttcttattaaata i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959396 283 + 135778131 CTTTTG-----TTGTTTACTAGGTAGTTTGATATAATAAAAGAAATTGTGTTCTCATTATATATTTGTCACTTAATGAATGAATGTAAAATCTTAATCAGGATATCTGACTTCTTTTAGTGACATTA-----CCCTT-TTTG-CAACTAACACATCAAATTAATAATATTTATCCTACAAAAATAATGTGAAGATAAATGAGATGAAAT--------ATGTAATAGTCACTCAATATTTATTGAATTAAGCTGTTTTTATTTACATATTTCTATATACTTACTAGAAATGTTCTTATTAAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2725771 283 - 3013352 CTTTTG-----TTGTTTAGTAGGTAGTTTGATATAATAAAAGAAATTGTGTTCTCATTATATATTTGTCACTTAATGAATGAATGTAAAACCTTAATCTGGATATCTGACTTCTTTTAGTGACATTA-----CCCTT-TTTG-CAACTAATACATCAAATTAATAATATTTATCCTACAAAAATAATGTGAAGATAAATGAGATGAAAT--------ATATAATAGTCACTCAATATTGATTGAATTAAGCTGTttttatttatatatttctatatacttactagaaatgttcttattaaata i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957183 283 + 8656713 CTTTTG-----TTGTTTAGTAGGTAGTTTGATATAATAAAATAAATtgtgttctcattatatatttgtcacttaatgaatgcatgtaaaaccttaatcaggatatctgacttcttttagtgacatta-----ccctt-tttg-caactaacacatcaaattaataatatttatcctacaaaaataatgtgaagataaatgagatgaagt--------atataaTAGTCACACAATATTTATTGAATTAAACTGTTTTTATCTATATATTTCTATATACTTACTACAAATGTTCTTTTTAAATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387275 282 - 190850796 CTATTG-----TTGTTTAGTAGGTAGTTTGATATAACAAGAGAAATTGTGTTCTCACTACATAtttgtcacttaaagaatgaatgtaaaatcttaatcaggctatctaatttcttttagtgacatta------cctt-attg-taagttgcacatcaaattagtaatatgtatccaacaaaaataatgtgaagataaatgagataagat--------atacaatagtcactcaatacTTATTGGATAAAGCTGTTTTTATTTATATATTTCTAGGTACTTACTAGATACGTTTTTATTAAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471124 278 - 25294431 CTTTTG-----TTGTTTAGTAGGTAGTTTGATGTAACAAGAGAACTTGTGTTCTCACTACATAtttgtcacttaatgaatgaatgtaaagtcttaatctggctatctaatttcttttagtgacatta------cctt-tttt-taagtaactcatcaaattagtaatatgtatcctgcaaaaataatgtgaagataaatgagataagat--------atataatagtcactcaatacTTATTGAATAAAGCTGTT----TTTATGTATTTCTGTGTACTTACTAGATATGTTTTTATTAAATA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4026879 269 - 6311556 CTTTTA-----TTGTTTAGTAGGTAGTTTGATATAACAAGAGAAATTGTGTTCTCACTACATATTTGTC----AATGAATGAATGTAAAATCTTAATCAGGCTATCTAATTTCTT---------TTA------CCTT-TTTT-TAAGTAACTCATCAAATTATTAATATATATTCTACAAAAATAATGTGAAGATAAATGAGATAAGAT--------ATATAATAGTCACTCAATACTTATTGAATAAAGCTGTTTTTATTTATATATTTCTATGTAGTTACTAGATATGTTTTTATTAAATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14880002 282 + 15034901 CTTTTG-----TTGTTTAGTAGGTAGTTTGATATAACAAGAGAAATTGTGTTCTCACTACATAtttgtcacttaatgaatgaatgtaaaatcttaatcaggctatctaatttcttttagtaacatta------cctt-tttg-taagtaacacatcaaattagtaatacgtatcctacaaaaataatgtgaagataaatgagataagat--------atataatagtcactcaatacTAATTGAATAAAGCTGtttttatttatatatctctatgtacttactagatatgtttttattaaata i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26288342 280 - 93316391 CTTTTG-----TTGTTTAAAAGGTAGGTTGATATAGTGGGAGAAAATATgttctcattatagatttgtcactt----aatgaatataaaacagtaatcaggctacctgatttcttttagttacacta-----ttgtt-tttg-caaagaattcatcaaattagtaatatttatcttacaggaatagtgtgtggttaaatgagataagacac------atgtaGTAGTCACTCAC-ATTTGTTAAATAAACCTGCTCTTATTTATATATTTCTATGTATTTACCAGGTATGTTCTTATTAAATA i micMur3.chr14 I 23 C 0 s otoGar3.GL873702 907200 283 - 3201129 CTTTTG-----TTGTTTAAAAGTTAGTTTGATATAGT--GAGAAAAAAAGTTCTAATTATATA--TGTCATTT----AATGAATATAAAATATTAATCAGGATGTATGATTGTTTTTAGTTGTCATA-----TTATT-TTTTCCAAATAACTAATCAAATTCATAATATTTATCTTGTA-AAACAGTGTGAAGATAAATGAGATGAGGTATACATTAATATAATAGTTGCTTAAGAATCTTTACATAAATCTGTTATTATTTATATAGGTTTATATCCTTACCAGGTATGTTCTTACTAAATA i otoGar3.GL873702 I 3 I 14 s canFam3.chr19 43999696 285 - 53741614 TTTTTGTTTAATTGCTTAGAAGGCAGTTTGATAATATGAGAGAAAGTTAGCATCAGTTATAGATTTGTCAC------AACGACTGTCAAATTTTAGTTAGGCTATCTGATTTCATTCAGTTACACTAGCATTTTTTT-TTTT-TTACTAACTTATCTAGTTAGTAACACTTATCCTAAAGGAGTAGTGTGAGAATAAATGATATATAGC--------ATGTTATA-TCATTCAATGTAAATAGGATGAGTCTCTTCTTATTTATGTATTTCTA-GTGTTTACTAGATATGTTCCTATTAAATA i canFam3.chr19 I 6 I 5 s dasNov3.JH569232 1669537 273 + 5974691 CTCCTG-----TTGCTTAGAAAATAGTTTGATTTAGTGAAAGAAACCATAGTCTAGTCATAGGTTTGTCAGTT----AATGAATGTAAAATTTTAATCAGGCTATCTGATTTCTTTT--TTAAACTA-----TTCTTCTTTG-TAACTAATTTATCTAG-TATTAATATTTATCCAACAGGAACAGTGTAAGAATATATGAGATAACAT--------ACGCAATAACCAC----TACTCATTGTATGGGTTTGTTCttatttatatatttttatgtacttaaaatatatgttcttattaaata i dasNov3.JH569232 I 1 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I a score=241278.000000 s hg38.chr9_KI270719v1_random 6665 35 + 176845 TTTTA--TTATGGTATATGTCAAGTCTTTT-ACTTCTT s panTro5.chr4 135033849 35 + 194502333 TTTTA--TTATGGTATATGTCAAGTCTTTT-ACTTATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14533 35 - 70559 TTTTA--TTATGGTATATGTCAAGTCTTTT-ACTTCTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427789 33 - 115148730 TTTTA--TTATGGTATATGTCAAGTCTTTT-ACT--TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131370222 31 + 190429646 tttta---tatggtatatatcaaatctttt-ac---tt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888969 30 + 189454096 TTTTA---TATGGTATATATCAAATCTTTT-AC----T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34880221 31 - 40319822 tttta---tatggtatatatcaaatctttt-ac---tt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434411 31 - 9219162 tttta---tatggtatatatcaagcctttt-ac---tt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959679 33 + 135778131 TTTTA--TTATGGTATAGATCAAGTCTTTTAAT---TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2726054 31 - 3013352 tttta---tatggtatatatcaagtctttt-ac---tt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957466 32 + 8656713 TTTTA--TTATGGTATATATCAAGTCTTTT-AC---TT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387557 34 - 190850796 TTTTG--TCATGTAATATATCAAGTCTTTT-TCTT-CT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471402 33 - 25294431 TTTTA---CATGGAATATATCAAGTCTTTT-ACTT-CT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4027148 34 - 6311556 TTTTA--GCATGGAATATGTCAAGTCTTTT-ACTT-CT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14880284 34 + 15034901 tttta--tCATGGAATATATCAAGTCTTTT-ACTT-CT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26288622 37 - 93316391 CTTTATTTTAGGGTACATACCAAGTCTTTT-ACTTCTT i micMur3.chr14 C 0 I 219 s canFam3.chr19 43999986 31 - 53741614 TTTTA------ATTGTATACTAAGTATTTT-ATTTCTT i canFam3.chr19 I 5 C 0 s dasNov3.JH569232 1669810 37 + 5974691 ttttatttCATGGTATTAACCAGGTCTTTT-ATTTCTT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=2049053.000000 s hg38.chr9_KI270719v1_random 6700 242 + 176845 TT-TTT-ATACTTAGTATATTATAGAACTCATCTTCCAATAAAATTGTAATACAATTTTCTTGATTTACTAATCCTAGGTGAAAA----atatatatatatatatatGTTGTC---TTCTGTTTGAATTATGCTTAGTGGATGGCATTTTCA-----ATA--ATCTCTCTGATTCTTCCTTTTC--CT-GTTTAAACTACTCTCATTCTCATTGTGGCCTA-GA-GTTCTTTTTCCCTAATATTGCCTTCAGAAGGCTAAGTT s panTro5.chr4 135033884 245 + 194502333 TT-TTT-ATATTTAGTATATTATAGAACTCACCATCCAATAAAACTATAATACAATTTTCTTGATTTACTAATCCTAGGTGGAAAAAatatatatatatatatatatGTTGTC---TTCTGTTTGAATTATGCTTAGTTGATGGCATTTTCA-----ATA--ATCTCTCTGATTCTTCCTTTTC--CT-GTGTAAACTACTCTCATTTTCATTGTGGCCTA-GA-TTTCTTTTTCCCTAATATTGCCTTCAG-AGGCTAAGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14568 240 - 70559 TT-TTT-ATACTTAGTATATTATAGAACTCACCATCCAAT-AAATTGTAATACAATTTTCTTGATTTACTAATCCTAGGTGAAAA----AAATATATATATATATATGTTGTC---TTCTGTTTGAATTATGCTTAGTTGATGGCATTTTCA-----ATA--ATCTCTCTGATTCTTCCTTTTC--CT-GTTTAAACTACTCTCATTCTCATTGTGGCC-A-GA-TTTCTTTTTCCCTAATATTGCCTTCAGAAGGCTAAGTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90427822 239 - 115148730 TT-TTT-ATACTTAGTATATTATAGAACTCACCATCCAATAAAATTGTAATACAATTTTCTTGATTTACTAATCCTAGGTGAAAA------AAATATATATATATATGTTGTC---TTCTGTTTGAATTATGCTTAGTTGATGGCATTTTCA-----ATA--ATCTCTTTGATTCTTCCTTTAC--CT-GTTTAAACTACTCTCATTCTCATTGTGACCCA-GA-TTTCCTTTTCCCTAATATCGCCTTCAG-AGGCTAAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131370253 233 + 190429646 tt-ttt-atacttaatatattataGAACTCACTATCCAATAAAATTGTAATACAATTTTCTTGATTTACTAATCCTAGGTGACAA------------AAATATATATGTTGTC---TTCTGTTAGAATTATGCTTAGATAATGGCATTTTTA-----ATA--ATCTCTTTGATTCTTCCTTTTC--CT-GTTTAAACTACTCTCATTCTCATTGTGGCTCA-GA-TTTCTTTTCCTCTATTATTGCCTTCAG-CGACTAGGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130888999 233 + 189454096 TT-TTT-ATACTTAATATATTATAGAACTCACTATCCAATAAAATTGTAATACAATTTTCTTGATTTACTAATCCTAGGTGACAA------------AAATATATATGTTGTC---TTCTGTTAGAATTATGCTTAGATAATGGCATTTTAA-----ATA--ATCTCTTTGATTCTTCCTTTTC--CT-GTTTAAACTACTCTCATTCTCATTGTGGCCCA-GA-TTTCTTTTCCTCTAATATTGCCTTCAG-CGACTAGGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34880252 233 - 40319822 tt-ttt-atacttaatatattataGAACTCACTATCCAATAAAATTGTAATACAATTTTCTTGATTTACTAATCCTAGGTGACAA------------AAATATATATGTTGTC---TTCTGTTAGAATTATGCTTAGATAATGGCATTTTTA-----ATA--ATCTCTTTGATTCTTCCTTTTC--CT-GTTTAATCTACTTTCATTCTCATTGTGGCCCA-GA-TTTCTTTTCCTCTAATATTGCCTTCAG-CGACTAGGTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434442 234 - 9219162 ttattt-atacttaatatattataGAACTCACTATCCAATAAAATTGTAATACAATTTTCTTGATTTACTAATCCTAGGTGACAA------------AAATACATATGTTGTC---TTCTGTTAGAATTATGCTTAGATAATGGCATTTTTA-----ATA--ATCTCTTTGATTCTTCCTTTTC--CT-GTTTAAACTACTCTCATTCTCATTGTGGCCCA-GA-TTTCTTTTCCTCTAATATTGCCTTCAG-GGACTAAGTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959712 233 + 135778131 TT-TTT-ATACTTAATATATTATAGAACTCAATATCCAATAAAATTGTAATACAATTTTCTTGATTTACTAATCCTAGGTGAAAA------------AAACATATATGTTGTC---TTCTGTTAGAATTATGCTTAGATGATGGCATTTTTA-----ATA--ATCTCTTTGATTCTTCCTTTTC--CT-GTTTAAACTACTCTCATTCTCATTGTGGCCCA-GA-TTTCTTTTTCTCTAATATTGTCTTCAC-GGGCTAAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2726085 233 - 3013352 tt-ttt-atacttaatatattataGAACTCACTATCCAATAAAATTGTAATACAATTTTATTGATTTCCTAATCCTAGGTGACAA------------AAATATATATGTTGTC---TTCTGTTAGAATTATGCTTAGATAATGGCATTTTTA-----ATA--ATCTCTTTGATTCTTCCTTTTC--CT-GTTTAAACTACTCTCATTCTCATTGTGGCCCA-GA-TTTCTTTTCCACTAATATTGCCTTCAG-GGACTAAGTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957498 233 + 8656713 TT-TTTAATACTTAATATATTATAGAACTCACTATCCAATAAAATTGTAATACAATTTTCTTGATTTACTAATCCTCGGTGAAAA------------AAATACTTATGTTGTC---TTCTGTTAGAATTATGCTTAGATGATGGAATTTTAA-----ATA--ATCTCTTTGATTCTTCCTCTTC--CC-GTTTAAACTACTCTCATTCTCATTGTGGCCCA-GA--TTCTTTTTCTCTAATATTGCCTTCAG-GTGCTAAGTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387591 229 - 190850796 TT-TTT--TAATTAGCATTTTATAGAACTCAGGATCCAATAAAATTGCAATACAATTGTCTTGAATTACTAATCCTAGGTGAAAA---------------TATATATGTTTTC---TTCTGTTTAAATTATGCTTAGTAGATGGCATTTTCA-----ATA--ACCTCTTTGATTCTTCCTTTTC--CT-ATTTAAACTACTCTCATTTTCATTGTGGCCCA-GG-TTTCTTTTTCCCTAATATTTCCTTAAG-GGGATAAGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471435 230 - 25294431 TT-TTT-ATACTTAGCATATTACAGAACTCAGGATCCAATAAAATTGCAATACAATTTTCTTGATTTACTAATCCTAGGTGAAAA---------------TATACATGTTTTC---TTCTGCTTAAATTATGCTTAGTACATGGCATTTTCA-----GTA--ACCCCTTTGATTCTTCCTTTTC--CT-ATTTAAGCTACTCTCATTTTCATTGTGGCCCA-GG-TTTCTTTTTCCCTAATATTTCCTTCAG-GGGTTAAGTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4027182 230 - 6311556 TT-TTT-ATACTTAGCCTATTATAGAACTCAGGATCCAATAAAATTGCAATACAATTTTCTTGATTTACTAATCCTCGGTGAAAA---------------TATATATGTTTTC---TTCTGTTTAAATTATGCCTAGTAGATGGCAATTTCA-----ATA--ACCTGTTTGATTCTACCTTTTC--CT-ATTTAAACTACTCTCATTTTCATCGTGGCCCA-GG-TTTCTTTTTCCCTAATATTTCCTTCAG-GGGTTAAGTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14880318 230 + 15034901 TT-TTT-ATACTTAGCATATTATAGATCTCAGGATCCAATAAAATTGCAGTACAATTTTCTTGATTTACTAATCCTAGGTGAAAA---------------TATATATGTTTTC---TTCTGTTTAAATTATGCTTAGTTGATGTCATTTTCA-----ATA--ACCTCTTTGATTCTTCCTTTTC--CT-ATTTAAACTACTCTCATTTTCATTGTGGCCCA-GG-TTTCTTTTTCCCTAATATTTCCTTCAG-GGGCTAAGTA i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44000017 231 - 53741614 -C-TTT-ATACTTAGTTTAGTGT-----TCAGAAT---ACAAAATTTTAACATACTCTTCTTGAATTCGTAATCCTGAGTGAAAA-----------AATATATGCCTGTTTCCCTATCCTTCTTAAATTATGTTTAGTTGATTAAATTTACA-----AGACCATATTTTTGTGTCTTCCTTTTC--CTCTTTTTGACTAATTTTATCTTTAT-GTGGTATAGGA-TTTCTTGTTGTTTGTTACTGCTTTCAG-AGGCCATGCC i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1669847 239 + 5974691 CT-GTA-ATGCTTAGCAAAGTAAAGATCTGAATATACAATAAAAATTTTATA-ATTCTTCTTGATTTACTAATCCTAGGTGAGAA-------------TATATATCTGCTTTA-AACCTTTCTTAAATTATGCTTAGTTGATTTTGTTTACATTGGCATA--A--TTTTTGTCTTTTCCTTTTCTTCT-TTTTTAATTACTTTCATTTTCATTGTGGTCTA-GAATTTCTTGTTCAATAATATTGTCTTGAG-TGACCAAGTC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26288659 219 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=666998.000000 s hg38.chr9_KI270719v1_random 6942 66 + 176845 TCTAATATAATAACAATTTGAGTCTTTACCACTTCT---CTCTAGA--ATCGTGATTTAGACTAGGTTATT s panTro5.chr4 135034129 66 + 194502333 TCTAATATAATAACAATTTGAGTCTTTACCACTTCT---CTCTAGA--ATCGTGATTTAGACTAGGTTATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14808 66 - 70559 TCTAATATAATAACAATTTGAGTCTTTACCACTTCT---CTCTAGA--ATCGTGATTTAGACTAGGTTATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90428061 66 - 115148730 TCTAATATAATAACAATTTGAGTCTTTACCAATTCT---CTCTAGA--ATCGTGATTTAGACTAGGTTATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131370486 66 + 190429646 TCTAATATAATAATATTTTGAGTCTTTGCCACTTCT---CTCTAGA--ATCATGATTTAGACTAGGTTATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130889232 66 + 189454096 TCTAATATAATAATATTTTGAGTCTTTGCCACTTCT---CTCTAGA--ATCATGATTTAGACTAGGTTATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34880485 66 - 40319822 TCTAATATAATAATATTTTGAGTCTTTGCCACTTCT---CTCTAGA--ATCATGATTTAGACTAGGTTATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434676 66 - 9219162 TCTAATATAATAATATTTTGAGTCTTTGCCACTTCT---CTCTAGA--ATCATGATTTAGACTAGGTTATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78959945 66 + 135778131 TCTAATATAATAATATTTTGAGTCTTTGCCTCTTCC---CTCTAGA--ATTATGATTCAGACTAGGTTATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2726318 66 - 3013352 TCTAATATAATAATATTTTGAGTCTTTGCCACTTCT---CTCTAGA--ATCATGATTTAGACTAGGTTATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957731 66 + 8656713 TCTAATATAATAATATTTTGAGTCTTTGCCACTTCT---CTCTAGA--ATCATGATTTAGACTAGGTTATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387820 66 - 190850796 ACTAAAATAATAACAATATAGGTCTTTACCACTTCT---CTCTAGA--AGCGTGATTTAGACTAGGTTATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471665 66 - 25294431 TCTAATACAATAACAATTTGGCTCTTTATCACTTCT---CTCTAGA--ATCATGATTTAGACTAGGTTATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4027412 66 - 6311556 TCTAATGTAATAACAATTTGGGTCTTTACCACTTCT---CTCTAGA--ATCGTGATTTAGACTAGGTTATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14880548 66 + 15034901 TCTAATATAATAACAATTTGTGTTTTTACCACCTCT---CTCTAGA--ATTGTGATTTAGACTAGGTTATT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26288878 66 - 93316391 TCTAATATAATGACAACCCAAGTCTTTATCATTTTT---CTCTAGA--ATCCTGATCTAGACTAGATTATT i micMur3.chr14 I 219 I 559 s canFam3.chr19 44000248 47 - 53741614 TTTAATATAAAGATAATCCAGGTCT-----ATCTCT---CTCTAGA----------------CAAGTTACT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1670086 63 + 5974691 AGCAATATAATGCCCATATAAGTCTATACCACTTCTTGCTTCTAGGGTGTTGTGACTGAGACT-------- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=1031282.000000 s hg38.chr9_KI270719v1_random 7008 121 + 176845 AGAGTAAACAATATGATTCCAAATTTTTT--CTTTT-----TTTTTAATGGGCTAGCATCCAAAAAGCTTAAGAATTCTTG------GGGGAA-ATGACATaattaagctagattattttaatttaaattcagaa s panTro5.chr4 135034195 120 + 194502333 AGAGTAAACAATATGATTCC-AATTTTTT--CCTTT-----TTTTTAATGGGCTAGCATCCAACAAGCTTAAGAATTCTGG------GGGAAA-ATGACATaattaagctagattattttaatttaaattcagaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14874 120 - 70559 AGAGTAAACAATATGATTCC-AAATTTTT--TCTTT-----TTTTTAATGGGCTAGCATCCAAAAAGCTTAAGAATTCTGG------GGGGAA-ATGACATAATTAAGCTAGATTATTTTAATTTAAATTCAGAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90428127 122 - 115148730 AGAGTACACAATATGATTCC-AAATTTTTTGTTTTT-----TTTTTAATGGGCTAGCATCCAAAAAGCTTAAGAATTCTGG------GGAAAA-ATGACATAATTAAGCTATATTATTTTAATTTAAATTCAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131370552 120 + 190429646 AAAGCAAACAATATGATTCC-AAATTTTT--TGTCT-----TTTTTTATGGGCTAGCATCCAAAAAGCTTAAGAATACTAG------TGGAAA-ATGACACAATTAAGCTAGATTattttaatttcaattcagaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130889298 120 + 189454096 AAAGTAAACAATATGATTCC-AAATTTTT--TGTCT-----TTTTTTATGGGCTAGCATCCAAAAAGCTTAAGAATCCTAG------TGGAAA-ATGACACAATTAAGGTAGATTattttaatttcaattcagaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34880551 120 - 40319822 AAAGTAAACAATATGATTCC-AAATTTTT--TGTCT-----TTTTTTATGGGCTAGCATCCAAAAAGCTTAAGAATTCTAG------TGGAAA-ATGACACAATTAAGCTAGATTATTTTAATTTCAATTCAGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434742 120 - 9219162 AAAGTAAACAATATGATTCC-AAATTTTT--TGTCT-----TTTTTTATGGGCTAGCATCCAAAAAGCTTAAGAATTCTAG------GGGAAA-ATGACATAATTAAGCTAGATTATTTTAATTTCAATTCAGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78960011 120 + 135778131 AAAGTAAACAATATGATTCC-AGATTTTT--TGTCT-----TTTTTTATGGGCTAGCGTCCAAACAGCTTAAGAATTCTAG------GGGAAA-ATGACATaattaaactagattattttaatttcaattcagaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2726384 120 - 3013352 AAAGTAAACAATATAATTCC-AAATTTTT--TGTCT-----TTTTTTATGGGCTAGCATCCAAAAAGCTTAAGAATTCTAG------GGGAAA-ATGACATAATTAAGCTAAATTATTTTAATTTCAGTTCAGAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957797 120 + 8656713 AAAGTAAACAATATGATTTC-AACTCTTT--TGTCT-----TTTTTTGTGGGCTAGCATCCAAAAAGCTTAAGAATTCTAG------GGGAAA-ATGACATAATTAAGCTAGATTattttaatttcaattcagaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129387886 117 - 190850796 GGAGTAAACGATATGATtcc-aa-ttttt--tg--------ttttttatgggctagcatccaaaaagcttaacaagtttgg------ggaaaaaatgacataattaagctacattattttaatttaaattcagac i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471731 116 - 25294431 GGAGTAAATAATATGATTCC-AA-TTTTT--TG---------TTTTTATGGGCTAGCATCCAAAAAGCTTAAAAAGTCTGG------GGAAAAGATGACATAATTAAGTGACATTATTTTAATTTAAATTCAGAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4027478 118 - 6311556 GGAGTAAACAATATGATTCC-AATTTTTT--TG--------TTTTGTATGGGCTAGCATCCAAAAAGCTTAAAAAGTCTTG------GGAAAAGATGACATAATTAAGCTACATTATTTTAATTTAAATTCAGAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14880614 117 + 15034901 AGAGTAAACAATATGATTTC-AA-TTTTT--TG--------TTTTTTATGGGCTAGCATCCAAAAAGTTTAAAAAGTCTGG------GGAAAAGATGACATAATTAAGCTACATTATTTTAATTTAAATTCAGAC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44000295 129 - 53741614 GGGATGGGCCAATTGATTCC-AGATTCTT--GTTTTCTGTGTGCTCTGTGTGCTAGCATCTAA--AGCTCAAGAATTctgagggggtggggga-atcacataattaagctggattattttactttagattcagag i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1670149 113 + 5974691 -TAATGAGCCAGTAGATCCC-AAAT------TGT-------GTTTTTATGTACTGGCATCCAAAGAGGTCAAGGATTctgg------aaaaaa-accacagaatcaagctggattatttgactttaaattcagaa i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26288944 559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=1499896.000000 s hg38.chr9_KI270719v1_random 7129 182 + 176845 ttaaaAATC------ATTTTCAATAGCTTCTTTGTCTT-----AATTTAACAAGCTTTTG-TTGAACATTGATTATATTTTGAATTCTATTTTTT-Cttttatttttagttggcacataattatacgtatttatgggatacagagtgatattttgatacatgtatacaatatgaaataatctaatcagagtaatt s panTro5.chr4 135034315 187 + 194502333 ttaaaAATC------ATTTTCAATAGCTTCTTTGTCTTTATTCAATTTAACCAGCTTTTG-TTGAACATTGATTATATTTTGAATTCTATTTTTT-Cttttatttttagttggcacataattatacgtatttatgggatacagagtgatattttgatacatgtatacaatatgaaataatctaatcagagtaatt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 14994 181 - 70559 TTAAAAATC------ATTTTCAATAGCTTCTTTGTCTT-----AATTTAACAAGCTTTTG-TTGAACATTGATTATATTTTGAATTCTATTTTTT-Cttttatttttagttggcacataattata-gtatttatgggatacagagtgatattttgatacatgtatacaatatgaaataatctaatcagagtaatt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90428249 187 - 115148730 TTAAAAATC------ATTTTCAATAGCTTCTTTGTCTTTATTCAATTCAACAAGCATTTG-TTGAACATTAATTATATTTTGAATTCTATTTTTT-Cttttatttttatttgacacataattatacatatttatgggatacagaatgacattttgatacatgtatacaatatgaaataatcaaatcagagtaatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131370672 187 + 190429646 ttaaaaatc------attttcaatatcTTCTTTGTCTTTACTCAATTTAACAAGCATTTG-TTGAACATTTATTATATTTTGAATTCTATTTTTT-Cttttatttttagttgacacataattatacatatttatgggatacagagtgacattttgatacctgtatacaacatgaaataatcaaatcagagtaatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130889418 187 + 189454096 ttaaaaatc------attttcaatatcTTCTTTGTCTTTACTCAATTTAACAAGCATTTG-TTGAACATTTATTATATTTTGAATTCTATTTTTT-Cttttatttttagttgacacataattatacatatttatgggatacagagtgacattttgatacctgtatacaacatgaaataatcaaatcagagtaatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34880671 187 - 40319822 TTAAAAATC------ATTTTCAATACCTTCTTTGTCTTTACTCAATTTAACAAGCATTTG-TTGAACATTTATTATATTTTGAATTCTATTTTTT-Cttttatttttagttgacacataattatacatatttatgggatacagagtgacattttgatacctgtatacaacatgaaataatcaaatcagagtaatt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4434862 187 - 9219162 TTAAAAATC------ATTTTCAATATCTTCTTTGTCTTTACTCAATTTAACAAGCATTTG-TTGAACATTTATTATATTTTGAATTCTATTTTTT-Cttttatttttagttgacacataattatacatatttatgggatacagagtgacattttgatacctgtatacaacatgaaataatcaaatcagagtaatt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78960131 183 + 135778131 ttaaaaatc------attttcaatAGC----TTGTCTTTACTCAATTTAACAAGCATTTG-TTGAACATTTATTATATTTTGAATTCTATTTTTT-Cttttatttttagtagacatataattatacatatttatgggatacagagtgacattttgatacctgtatataatatgaaataatcaaatcagagtaatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2726504 187 - 3013352 TTAAAAATT------ATTTTCAATATCTTCTTTGTCTTTACTCAATTTAACAAGCATTTG-TTGAACATTTATTATATTTTGAATTCTATTTTTT-Cttttatttttagttgacacatgattatacatatttatgggatacagagtgacattttgatacctgtatacaacatgaaataatcaaatcagagtaatt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5957917 187 + 8656713 ttaaaaatc------attttcaatAGCTTCTTTGTCTTTACTCAATTTAACAAGCATTTG-TTGAACATTTATTATATTTTGAATTCTATTTTTT-Cttttatttttagttgacacatgattatacatatttatgggatacagagtgacattttgatgcctgtatacaatatgaaataatcaaatcagagtaatt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129388003 177 - 190850796 cTACAAGTC------ATTTTCAATAGCTGCTTTGTCTTT-----ATTAAACAAGAATTTG-TTGAACATTGATTATATTTTGAATCCTATTT----TTCTTTtttttagtta--acataattatacatacttatgggatacagagtgatattttgatacatgtatacaatgtgaaataatcaaatcagggcaatt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6471847 174 - 25294431 TTACATGTC------ATTTTCAATAACTGCTTTGTCTTTATTTAATTTAACAAGCATTTG-TTGAACATTGATTATATTTTGAA------------TTCTTTtttttagtta--acataattatacatacttatgggatacagagtgatattttgatacatgtatacaatatgaaataatcaaatcagggtaatt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4027596 186 - 6311556 TTACAAGTC------ATTTTCAATAGCTGCTTTGTCTTT--TTAATTTAGCAAGCATTTG-TTGACCATTGATTATATTTTGAATTCTATTTTTTCTTTCTTtttttagttaacacataattatacatacttatgggatacaaagtgatattttgatacatgtatacaatatgaaataattaaataagggtaatt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14880731 187 + 15034901 TTACAAGTC------ATTTTCAATAGCTGCTTTGTCTTTATTTAATTTAACAAGCATTTG-TTGAACATTGATTATATTTTGAATTCTATTTTTT-Cttttttttttagttaacacataattatacatacttatgggatacagagtgatattttgatacatgtatacaatatgaaataatcaaatcagggtagtt i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1670262 154 + 5974691 ttacaaatctaaaggatattcaatagt--------------tcaaaaaaaaaaccttatacttgcacaatga----------------attcaca-ctcttatgttcaatatattaat-attctacaAAATTATCATACATAGTTTGCTAAACTAATGACCTCTTTTGATAT---------TAATGAGATTAATT i dasNov3.JH569232 C 0 I 288 e micMur3.chr14 26288944 559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44000424 0 - 53741614 C e otoGar3.GL873702 907483 14 - 3201129 I a score=2211382.000000 s hg38.chr9_KI270719v1_random 7311 274 + 176845 agcatatctatcaccttgtacatttgtcatttccttgtgatgtgaatattcagaattctgtctggtacgttttt-aaaaaaattcactaaattattgttaacttaattcaccctacagtgctacagaacagt-agagctattcctcccttctagctacaactttgttacaaagttaactttgcttaccaacctctttccatcctcttcttattcccatcctttccagcctctgataactacaattctacttgttacttttataa-----gttcatt-tttac s panTro5.chr4 135034502 275 + 194502333 agcatatctatcaccttgtacatttgtcatttccttgtgatgtgaatattcagaattctgtctggtaggttttt-aaaaaaattcactaaattatttttaacttaattcaccctacagtgctacagaacactaagagctattcctcccttctagctacaactttgttacaaagttaactttgcttaccaacctctttccatcctcttcttattcccatcctttccagcctctgatagctacaattctacttgttacttttataa-----gctcatt-cttag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 15175 274 - 70559 agcatatctatcaccttgtacatttgtcatttccttgtgatgtgaatattcagaattctgtctggtaggttttt-aaaaaaattcactaaattattgttaacttaattcaccctacagtgctacagaacact-agagctattcctcccttctagctacaactttgttacaaagttaactttgcttaccaacctctttccatcctcttcttattcccatcctttccagcctctgataactacaattctacttgttacttttataa-----gctcatt-tttag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90428436 273 - 115148730 agcatatctatcaccttgtacatttgtcatttccttgtgatgtgaatattcagaattctgtctggtaggttttt-aaaaatattcactaaattattgttaacctaattcaccctacagtgctacagaacact-agagctattccttccttctagctacaactttgttacaaagttaactttgctgactaaccgcttttcatcctcttcttattcccatcctttccagcctctgataaccacaattctacttgctacttttataa-----gctcatt--ttag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131370859 275 + 190429646 agcatatctatcaccgtgtacatttgtcatttccttgtgttgtgaatattcagaattatgtctggtaggttttt-aaaaagattcactaaattattgttaacctaattcatcctacagtgctacagaacact-agagctattcctcccttctagctacaattttgtaacaaggtcaactttgcttacaggcgtcttttcatccttttcttatccccatcctttccagcctctgataaccacaattctacttgctacttttataa-----gctcattttttat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130889605 275 + 189454096 agcatatctatcaccgtgtacatttgtcatttccttgtgttgtgaatattcagaattatgtctggtaggttttt-aaaaagattcactaaattattgttaacctaattcatcctacagtgctacagaacact-agagctattcctcccttctagctacaattttgtaacaaggtcaactttgcttacaggcgtcttttcatccttttcttatccccatcctttccagcctctgataaccacaattctacttgctacttttataa-----gctcattttttat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34880858 276 - 40319822 agcatatctatcaccgtgtacatttgtcatttccttgtgttgtgaatattcagaattatgtctggtaggtttttaaaaaagattcactaaattattgttaacctaattcatcctacagtgctacagaacact-agagctattcctcccttctagctacaattttgtaacaaggtcaactttgcttacaggcgtcttttcatccttttcttatccccatcctttccagcctctgataaccacaattctacttgctacttttataa-----gctcattttttat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4435049 275 - 9219162 agcatatctatcaccttgtacatttgtcatttccttgtgttgtgaatattcagaattatgtctggtaggttttt-aaaaagattcactaaattattgttaacgtaattcatcctacagtgctacagaacact-agagctattcctcccttctagctacaattttgtaacaaagtcaactttgcttacaggcctcttttcatccttttcttatccccatcctttccagcctctgataaccacaattctacttgctacttttataa-----gctcattttttat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78960314 275 + 135778131 agcatatctatcacattgtacatttgtcatttccttgtgtagtgaatattcagaattttgtctgataggttttt-aaaaagattcactgaattattgttaacctaattcaccctacagtgctacagaacact-agagctattcctcccttctagctacaattttgtaacaaagtcaactttgcttacaggcctcttttcattctcttcttatccccaccctttccaacctctgataaccacaattctacttgctacttttataa-----gctcattttttat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2726691 275 - 3013352 agcatatctatcaccttgtacatttgtcatttccttgtgttgtgaatattcagaattatgtctggtaggttttt-aaaaagattcactaaattattgttaacctaattcatcctacagtgctacagaacact-agagctattcctcccttctagctacaattttgtaacaaagtcaactttgcttacaggcctcttttcatccttttcttatccccatcctttccagcctctgataaccacaattatacttgctacttttataa-----gctcattttttat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5958104 275 + 8656713 agcatatctatcaccttgtacatttgtcatttccttgtgttgtgaatattcagaattatgtctggtaggttttt-aaaaagattcactaaattattgttaacctaattcaccctacagtgctacagaacact-agagctattcctcccttctagctacagttttgtaacaaagtcaactttgcttacaggcctcttttcatcctcttcttatccccatcctttcctgcctctgataaccacaattctacttgctacttttataa-----gctcattttttat i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129388180 277 - 190850796 agcatattcatcaccttgtacatttgtcatttccttgtgttgtggatatttaaaattctgtctggtaggttttc-taaaatattcaccaaattattgttaacctaattcaccctacagtgctacagaacact-agagctattccacacatctagctctaactttctaacaaagttaactttgtttaccaaactctttttatcctcttcttatccccaccctttctagcctctgataaccacaattctacttg---cttttataacccccccttcttttttag i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6472021 277 - 25294431 agcatactcatcaccttgtacatttgtcatttccttgtgttgtggatatttaaaattctgtctggttgattttt-taaaatattcaccaaattattgttaacctaattcaccctacagtgctacagaacact-agagctgtttctcccatctagctataactttatagcaaagttaactttgtttaccaaccgcttttcatcctctccttattcccaccttttctagcctcggataaccacaattctacttg---cttttataaccccccctttttttttag i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4027782 269 - 6311556 agcatattcatcaccttgtacatttgtcatttcc-----ttgtgaatatttaaaattctgtctggttggatttt-taaaatattcaccaaattattgttaacctaattcaccctacagtactacagaacact-agagctgttcctcccatctagctataactttataacaaagttaactttgtttaccagcctcttttcatcctcttcttatccccaccctttctagcctctgagaaccacaa---aaggag---cttttataactccttttttttttttag i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14880918 276 + 15034901 agcatattcatcaccttgtacatttgtcatttccttgtgttgtgaatatttaacattctgtctggtaggctttt-taaaatattcactaaattattgttaacctaattcaccttacagtgctacagagcact-agagctattccttccatctaactataactttataacaaagttaactttgtttactaacctcttttcatcctcttcctatccccaccctttctagcctctgataaccacaattttacttg---cttttataa-gctcattttttttttag i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26288944 559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1670416 288 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44000424 0 - 53741614 C e otoGar3.GL873702 907483 14 - 3201129 I a score=337057.000000 s hg38.chr9_KI270719v1_random 7585 39 + 176845 ctcccacatataagtgagaacatgtggtttttctctctc s panTro5.chr4 135034777 39 + 194502333 ctcccacatataagtgagaacgtggtttttctctctctc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 15449 39 - 70559 ctcccacatataagtgagaacatgtggtttttctctctc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90428709 39 - 115148730 ctcccacatgtaagtgagaacatgtggtttttctccctc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131371134 39 + 190429646 ctcccacatgtaagtgaggacatgtgttttttctctctc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130889880 39 + 189454096 ctcccacatgtaagtgaggacatgtgttttttctctctc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34881134 39 - 40319822 ctcccacatgtaagtgaggacatgtgttttttctctctc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4435324 39 - 9219162 ctcccacatgtaagtgaggacatgtgttttttctctctc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78960589 39 + 135778131 ctctcacatgtaattgaggacatgtggtttttctctctc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2726966 39 - 3013352 ctcccacatgtaagtgaggacatgtggtttttctctctc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5958379 39 + 8656713 ctcccacatgtaagtgaggaaatgtgttttttctctctc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129388457 39 - 190850796 cttccaaatataagttagaacatgtgctttttcactctc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6472298 39 - 25294431 cttccaaatatatgttagaacatgtgttttttcactctc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4028051 39 - 6311556 cttccaaatataagttagaacatgtgttttttcactctc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14881194 39 + 15034901 cttccaaatataagttagaacatgtggtttttcactctc i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26289503 39 - 93316391 ctcccacatatgagtgagaacatatggtatttatctttg i micMur3.chr14 I 559 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1670416 288 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44000424 0 - 53741614 C e otoGar3.GL873702 907483 14 - 3201129 I a score=707864.000000 s hg38.chr9_KI270719v1_random 7624 77 + 176845 tgtgcctgtctt-atttcacttaacgtaatgtcctccaggctcatcc---acgttgtaactaataacatgatttcaATTCA s panTro5.chr4 135034816 77 + 194502333 tgtgcctgtctt-atttcacttaacataatgtcctccaggctcatcc---acgttgtaactaataacatgatttcaATTAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 15488 77 - 70559 tgtgcctgtctt-atttcacttaacataatgtcctccaggctcatcc---acgttgtaactaataacatgatttcaATTCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90428748 77 - 115148730 tgtgactgtctt-atttcacttaacataatgtcctccaggctcatcc---acgttgtaactaataacatgatttcaATTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131371173 77 + 190429646 tgtgcctatctt-agttcacttaacataatgtcctccaggatcacac---atgttgtaactaataacacgatttcaATGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130889919 77 + 189454096 tgtgcctatctt-acttcacttaacataatgtcctccaggatcacac---atgttgtaactaataacacgatttcaATGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34881173 77 - 40319822 tgtgcctatctt-acttcacttaacataatgtcctccaggatcacac---atgttgtaactaataacacgatttcaATGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4435363 77 - 9219162 tgtgcctatctt-acttcacttaacataatgtcctccaggatcacac---atgttgtaactaataacacgatttcaATGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78960628 77 + 135778131 tgtgcctatctt-acttcacttaacataatgtcccccaggatcacac---atgttttaactaataatacgatttcaATGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2727005 77 - 3013352 tgtgcctatctt-acttcacttaacataatgtcctccaggatcacac---atgttgtaactaataacacgatttcaATGAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5958418 77 + 8656713 tgtgcctatctt-acttcacttaacataatgtcctccaggatcacac---atgttgtaactaataacatgatttcaATGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129388496 77 - 190850796 tgtacctgtctt-atttcatttaacataatgtcctccaggctcatcc---atgttgtaactaacaggatGATTTCAATTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6472337 77 - 25294431 tgtgcctgtctt-atttcacttaacataatgtcctccaggcttatcc---aggttgtaactaacagcataatttcaATTAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4028090 77 - 6311556 tgtgcctgtctt-atttcacttaacatagtgtcctccaggctcatcc---acgttctaactaacaggatGATATCAATTAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14881233 77 + 15034901 tgtgcctgtctt-atttcacttaacataatgtcctccaggctcatcc---atgttgtaactaacagcatgatttcaATTAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26289542 77 - 93316391 tgtacctgactt-atttcactgaacataatgtccttcagactcatcc---atgttgcggcaaatgacaggatttcaCAGAA i micMur3.chr14 C 0 C 0 s dasNov3.JH569232 1670704 75 + 5974691 tatccctgtcttcaattcacttattatgatttctttc-----ctcccaaaatattgaaaat-gtttcatggtcaaaattat i dasNov3.JH569232 I 288 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44000424 0 - 53741614 C e otoGar3.GL873702 907483 14 - 3201129 I a score=986142.000000 s hg38.chr9_KI270719v1_random 7701 107 + 176845 TTACAAAACTTAAAAGGATACTCAACAGTGCCAAACATTCTATTTTAGTTTCCCAATGCATTCACTCCCACAGCATTCATAACAATAACCTTCTAC--AAAGTTACCAC s panTro5.chr4 135034893 107 + 194502333 TTACAAAACTTAAAAGGATACTCAACAGTGCCAAACATTCTATTTTAGTTTCGCAGTGCATTCACTCCCACAACATTCATAACAATAACCTTCAAC--AAAGTTACCAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 15565 107 - 70559 TTACAAAACTTAAAAGGATACTCAACAGTGCCAAACATTCTATTTTAGTTTCCCAATGCATTCACTCCCACAGCATTCATAACAATAACCTTCTAC--AAAGTTACCAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90428825 107 - 115148730 TTACAAAACTTAAAAGGATACTCAACAGTGCCAAACATTCTATTTTAGTTTCCCAACGCATTCACTCCCACAGCATTCATAACAATAACCTTCTAC--AAAGTTACCAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131371250 107 + 190429646 TTACAAAACTTAAAAGGATACTCAACAGTGACAAACATTCTATTTTAGTTTCCCAATGCATTCACTCCCACAGAATTGGTAACAACAACCTTCTAC--AAAGTTACCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130889996 107 + 189454096 TTACAAAACTTAAAATGATACTCAACAGTTACAAACATTCTATTTTAGTTTCCCAATGCATTCACTCCCACAGAATTGGTAACAATAACCTTCTAC--AAAGTTACCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34881250 107 - 40319822 TTACAAAACTTAAAAGGATACTCAACAGTTACAAACATTCTATTTTAGTTTCCCAATGCATTCACTCCCACAGAATTGGTAACAACAACCTTCTAC--AAAGTTACCAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4435440 107 - 9219162 TTACAAAACTTAAAAGGATACTCAACAGTGACAAACATTCTATTTTAGTTTCCCAATGCATTCACTCCCACAGAATTGGTAACAACAACCTTCTAC--AAAGTTACCAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78960705 107 + 135778131 TTACAAAACTTAAAAGGATACTCAACAGTGACAAGCATTGTATTTTAGTTTCCCAATGCATTCACTCCCACAGAATTCATAACAACCACCTTCTAC--AAAGTTACCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2727082 107 - 3013352 TTACAAAACTTAAAAGGATACTCAACAGTGACAAACATTCTATTTTAGTTTCCCAATGCATTCACTCCCACAGAATTGGTAACAACAACCTTCTAC--AAAGTTACCAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5958495 107 + 8656713 TTACAAAACTTAAAAGGATACTCAACAGTGGCAAACATTCTGTGTTAGTTTCCCAATGCATTCACTCCCACAGAATTCATAACAACAACCTTCTAC--AAAGTTACCGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129388573 106 - 190850796 TTACAAATCTTAGAACTATACTCAACAGTGCCAATCATTCTATTTTAGTTTCCCAATGCAATCACTCCCACCAGATTCATAACAATAACCATCTAC--AAA-TTACCAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6472414 106 - 25294431 TTACAATTCTTAAAAGGATACTCAACAGTGCCAATCATTCCATTTTAGTTTCCCAATGCAATCACTCCCACCTGATTCATAACAATAACCATCTAC--AAA-TTACCGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4028167 106 - 6311556 TTACAAATCTTAAAAGGATACTCATCAGTGCCAATCATTCCATTTTAGTTTCCCAATGCAATCACTCCCACCTGATTCATAACAACAACCATCTAC--AAA-TTACCAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14881310 106 + 15034901 TTACAAATCTTAAAAGGATACTCAACAGTGCCAATCATTCCATTTTAGTTTCCCAATGCAATCACTCCCACCGGATTCATAACAATAACCATCTAC--AGA-TTACCAC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26289619 107 - 93316391 TTACAAATATTAAAGTGATACGCAACAGTGCCAAGCATTCTATTATAGTTTTCCAATGCATTCATGCTCACACTATTCATAATGGCAAACTTCTAC--AAAGTTACCAC i micMur3.chr14 C 0 I 1559 s canFam3.chr19 44000424 91 - 53741614 ttacaaatcttaacagggagccaaatagttccagggtatctat--------------gtattcattctcacactattcATATTGA--GTTTTCTGC--AAAGTTACCAC i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1670779 66 + 5974691 ---------ttaaaa---------------------attgtct-------------tgctttcaatgcaaaagcatacttctctaccacattttacttaaagttagaac i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=359328.000000 s hg38.chr9_KI270719v1_random 7808 40 + 176845 ATGTCTTATGCTAAATTGAC----AAGATCTCCCAATATTAAGT s panTro5.chr4 135035000 40 + 194502333 ATGTCTTATGCTAAATTGAT----GGGATCTCCCAATATTAAGT i panTro5.chr4 C 0 I 106 s gorGor5.CYUI01001450v1 15672 38 - 70559 --GTCTTATGCTAAATTGAT----GAGATCTCCCAATATTAAGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90428932 40 - 115148730 ATGTCTTATGCTAAATTGAT----GGGATCTCCCAATATTAAGT i nomLeu3.chr7b C 0 I 106 s rheMac8.chr5 131371357 40 + 190429646 ATGTCTTATGCTAAATTGAT----GGTATCTCCTCATATTAAGT i rheMac8.chr5 C 0 I 106 s macFas5.chr5 130890103 40 + 189454096 ATGTCTTATGCTAAATTGAT----GGTATCTCCTAATATTAAGT i macFas5.chr5 C 0 I 35 s macNem1.NW_012010911v1 34881357 40 - 40319822 ATGTCTTATGCTAAATTGAT----GGTATCTCCTAATATTAAGT i macNem1.NW_012010911v1 C 0 I 106 s cerAty1.NW_012000798v1 4435547 40 - 9219162 ATGTCTTATGCTAAATTGAT----GGTATCTCCTAATATTAAGT i cerAty1.NW_012000798v1 C 0 I 106 s chlSab2.chr7 78960812 40 + 135778131 ATGTCTTATGCTAAATTGAT----GGTATCTCCCAATATTAAGT i chlSab2.chr7 C 0 I 106 s manLeu1.NW_012103277v1 2727189 40 - 3013352 ATGTCTTATGCTAAATTGAT----GGTATCTCCTAATATTAAGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5958602 40 + 8656713 ATGTCTTACGCTAAATTGAT----GGTATCTCCCAATATTAAGT i colAng1.NW_012114544v1 C 0 I 106 s calJac3.chr3 129388679 38 - 190850796 --GTCTTATGCTAAATTGAT----GGGATCTCCCAATATTAAGT i calJac3.chr3 C 0 I 58 s saiBol1.JH378129 6472520 40 - 25294431 ATGTCTTATGCTAAATTGAT----GGGATCTCCCAATATTAAGT i saiBol1.JH378129 C 0 I 107 s cebCap1.NW_016107420v1 4028273 38 - 6311556 --GTCTTATGCTAAATTGAT----GGGATCTCCCAATGTTAAGT i cebCap1.NW_016107420v1 C 0 I 107 s aotNan1.NW_018507635v1 14881416 38 + 15034901 --ATCTTATGCTAAATTGAT----GGGATCTCCCAATATTAAGT i aotNan1.NW_018507635v1 C 0 I 107 s canFam3.chr19 44000515 40 - 53741614 ATGTATAATGCTATgctggt----ggcctttctcattattaagt i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1670845 34 + 5974691 --attattaacccagttgatcatggctttcttctgg-------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=47552.000000 s hg38.chr9_KI270719v1_random 7848 4 + 176845 AAAT s panTro5.chr4 135035146 4 + 194502333 AAAT i panTro5.chr4 I 106 C 0 s gorGor5.CYUI01001450v1 15710 4 - 70559 AAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429078 4 - 115148730 AAAT i nomLeu3.chr7b I 106 C 0 s rheMac8.chr5 131371503 4 + 190429646 AAAT i rheMac8.chr5 I 106 C 0 s macFas5.chr5 130890178 4 + 189454096 AAGT i macFas5.chr5 I 35 C 0 s macNem1.NW_012010911v1 34881503 4 - 40319822 AAAT i macNem1.NW_012010911v1 I 106 C 0 s cerAty1.NW_012000798v1 4435693 4 - 9219162 AAAT i cerAty1.NW_012000798v1 I 106 C 0 s chlSab2.chr7 78960958 4 + 135778131 AAAT i chlSab2.chr7 I 106 C 0 s manLeu1.NW_012103277v1 2727229 4 - 3013352 AAAT i manLeu1.NW_012103277v1 C 0 I 118 s colAng1.NW_012114544v1 5958748 4 + 8656713 AAAT i colAng1.NW_012114544v1 I 106 C 0 s calJac3.chr3 129388775 4 - 190850796 AAAT i calJac3.chr3 I 58 C 0 s saiBol1.JH378129 6472667 4 - 25294431 AAAT i saiBol1.JH378129 I 107 C 0 s cebCap1.NW_016107420v1 4028418 4 - 6311556 AAAT i cebCap1.NW_016107420v1 I 107 C 0 s aotNan1.NW_018507635v1 14881561 4 + 15034901 AAAT i aotNan1.NW_018507635v1 I 107 C 0 s canFam3.chr19 44000555 4 - 53741614 aaat i canFam3.chr19 C 0 I 58 s dasNov3.JH569232 1670879 4 + 5974691 aaat i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=20288.000000 s hg38.chr9_KI270719v1_random 7852 15 + 176845 TCTGT---------------------------------------------------------------------------CC-TTAG-----------------------------------------------CTCT s panTro5.chr4 135035150 16 + 194502333 TCTGT---------------------------------------------------------------------------CCCTTAG-----------------------------------------------CTCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 15714 16 - 70559 TCTGT---------------------------------------------------------------------------CCCTTAG-----------------------------------------------CTCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429082 16 - 115148730 TCTGT---------------------------------------------------------------------------CCCTTAG-----------------------------------------------CTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131371507 16 + 190429646 TCTGT---------------------------------------------------------------------------CTCTTAG-----------------------------------------------Ctct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130890182 87 + 189454096 TTTATAATTTGTCTCCATTTACTAATATTTTTCCCTCCATTCCATATCTGAACTATTTCTTCTAT----CAAAATTCTGTCTCTTAG-----------------------------------------------Ctct i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34881507 16 - 40319822 TCTGT---------------------------------------------------------------------------CTCTTAG-----------------------------------------------CTCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4435697 16 - 9219162 TCTGT---------------------------------------------------------------------------CTCTTAG-----------------------------------------------CTCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78960962 16 + 135778131 TCTGT---------------------------------------------------------------------------CTCTTAG-----------------------------------------------Ctct i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5958752 16 + 8656713 TCTGT---------------------------------------------------------------------------CTCTTAG-----------------------------------------------Ctct i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129388779 63 - 190850796 ACTAT---------------------------------------------------------------------------TTTTTCCCTCCATTCCATATCAGAACTTTCTTCTATCAAAATTCTGTCCCGTAGCTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6472671 16 - 25294431 TCTGT---------------------------------------------------------------------------CCCTTCG-----------------------------------------------CTCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4028422 16 - 6311556 TCTGT---------------------------------------------------------------------------CCCTTAG-----------------------------------------------CTCT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14881565 16 + 15034901 TCTGT---------------------------------------------------------------------------CCCTTAG-----------------------------------------------CTCT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44000617 80 - 53741614 cctgt-----------gctcttttcttcttttctcttgtttatataaaataactcttccttctatcaaaCAAAATATAGTCCCTCAA-----------------------------------------------CTTT i canFam3.chr19 I 58 C 0 s dasNov3.JH569232 1670883 12 + 5974691 ----t---------------------------------------------------------------------------ctctact-----------------------------------------------ttct i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I e manLeu1.NW_012103277v1 2727233 118 - 3013352 I a score=1697665.000000 s hg38.chr9_KI270719v1_random 7867 215 + 176845 CCCTCTCATTTTAGTATTATCATTCTC----ATTAATGAATAATTCCCTTTTTGTTAAAAGTTTACATTGACCTACCGTTGTCCTTCAGTTATCAACTTACTTTGTATTCTTTCTTT---------------GAAAGAAAT---CAATCAAAC---AA-TAGACAGTCTCCTTCAATATTTCC-TGTACTGTCTTCAACCCACT-TAGCTGAGTactttcttttttctctacttactcacttt s panTro5.chr4 135035166 211 + 194502333 CCCTCTCATTTTAGTATTATCATTCTC----ATTAATGAATAATTCCCTTTTTGTTAAAAGTTTACGTTGACTTACCGTTGTTCTTCAGTTATCAACTTACTTTGTATTCTTTCTTT---------------GAAAGAAAT---CAA----AC---AA-TAGACAGTCTCCTTCAATATTTCC-TGTACTGTCTTCAACCCACT-TAgctgagtactttcttttttctctactttctcacttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 15730 215 - 70559 CCCTCTCATTTTAGTATTATCATTCTC----ATTAATGAATAATTCCCTTTTTGTTAAAAGTTTACATTGACCTACCGTTGTCCTTCAGTTATCAACTTACTTTGTATTCTTTCTTT---------------GAAAGAAAT---CAATCAAAC---AA-TAGACAGTCTCCTTCAATATTTCC-TGTACTGTCTTCAACCCACT-TAGCTGAGTactttcttttttctctacttactcacttt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429098 215 - 115148730 CCCTCCCATTTTAGTATTATCATTCTC----ATTAATGAATAATTCCCTTTTTGTTAAAAGTTTACATCGACCTACCGTTGCCCTTCACTTATCACCTTACTTTGTATTCTTTCTTT---------------GAAAGAAAT---CAATCAAAC---AA-TAGAAAGTCTCCTTCAATATTTCC-TGTACTGTCTTCAACCCACT-TAGCTGAGTactttcttttttctctacttattcactat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131371523 218 + 190429646 ccctctcattctactattatcattctc----attAATGAGTAACTCCCATTTTATTAAAAGTTTACATTGACTTACTGTTGCTCTTGAGTTATCACCTTACTTTGTATTCATTCTTT---------------GAAAGAAAT---CAATCAAACAATAA-TAGAAAGTCTCCTTCAATATTTCC-CGTACTGTCTTCAACGCACC-TAACTTACTGctttcttttttctctacttactcacttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130890269 218 + 189454096 ccctctcattctactattatcattctc----attAATGAGTAACTCCCATTTTATTAAAAGTTTACATTGACTTACTGTTGCTCTTGAGTTATCACCTTACTTTGTATTCATTCTTT---------------GAAAGAAAT---CAATCAAACAATAA-TAGAAAGTCTCCTTCAATATTTCC-CGTACTGTCTTCAACGCACC-TAACTTACTGctttcttttttctctacttactcacttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34881523 215 - 40319822 CCCTCTCATTCTACTATT---ATTCTC----ATTAATGAGTAACTCCCATTTTATTAAAAGTTTACATTGACTTACTGTTGCTCTTGAGTTATCACCTTACTTTGTATTCATTCTTT---------------GAAAGAAAT---CAATCAAACAATAA-TAGAAAGTCTCCTTCAATATTTCC-CGTACTGTCTTCAACCCACC-TAACTTACTGctttcttttttctctacttactcacttt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4435713 215 - 9219162 CCCTCTCATTCTACTACTATCATTCTC----ATTAATGAGTAACTCCCATTTTATTAAAAGTTTACATTGACTTACTGTTGCCCTTGAGTTATCACCTTACTTTGTATTCATTCTTT---------------GAAAGAAAT---CAATCAAACAATAA-TAGAAAGTCTCCTTCAATATTTCC-TGTACTGTCTTCAACCCACC-TAACTTAGTGct---ttttttctctacttactcacttt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78960978 214 + 135778131 ccctctcattctactattatcattctc----attAATGAATAACTCCCATTTTATTAAAAGTTTACATTAACTTACTGTTGCCCTTGAGTTATCACCTTACTTTATATTCTTTCTTT---------------GAAAGAAAT---CAATCAAACAATAA-TAGAAAGTCTCCTTCAATATTTCC-TGTACTGTCTTCAACCCACC-TAgcttagtgctttcttttttctctactt----acttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2727351 214 - 3013352 CCCTCTCATTCTACTACTATCATTCTC----ATTAATGAGTAACTCCCATTTTATTAAAAGTTTACATTGACTTACTGTTGCCCTTGAGTTATCACCTTACTTTGTATTCATTCTTT---------------GAAAGA-------TTTCAAACAATAA-TAGAAAGTCTCCTTCAATATTTCC-TGTACTGTCTTCAACCCACC-TAActtagtgctttcttttttctctacttactcacttt i manLeu1.NW_012103277v1 I 118 C 0 s colAng1.NW_012114544v1 5958768 218 + 8656713 ccctctcattctactattatcattctc----attAATGAATAACTCCCATTTTATTAAAAACTTACATTGACTTACTGTTGTCCTTGAGTTATCACCTTACTTTGTATTCTTTCTTT---------------GAAAGAAAT---CAATTAAACAATAA-TAGAAAGTCTCCTTCAATATTTCC-TGTACTGTCTTCAACCCACC-TAgcttagtgctttcttttttctctacttactcacttt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129388842 223 - 190850796 CCCTCTCAATCTAGTTTTATCATTCTC-ATTATTAATGAATAAATCCCTTTTTGTTAAAAGTTTACATCGACCTACCATTGCCCTTCAGTTATTACCTTACTTTGTATTCTTTCTTT---------------GAAAGAAAT---CAAACGAACAATAA-TAGAAAGTCTCCCTCAATATTTCCAATCACTGTCTTCAACCCACCTTAGCTGAGTAttttcttttatctctacttactcacgct i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6472687 221 - 25294431 CCCTCTAGATCTAGTATTATCATTCTC-ATTATTAATGAATAAACCCCTTTTTGTTAAAAGTTTACAGTGACCTACCATTGTCCTTCAGTTATTACCTTACTTTGTATTCTTTATTT---------------GAAAGAAAC---CAAACAAACAATAA-TAGAAAGTCTCCATCAATATTTCC-ATCACTGTCTTCAACCCACC-TAGCTGAGTAttttcttttatctctacttactcacttt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4028438 217 - 6311556 TCCTCTCAGTCTAGTAGTATCATTCTC-ATTATTAATGAATAAATCCCTTTTTGTTAAAAGTTTACATTGACCTACCATTGTCCTTCAGTTATTACCTTACTTTGTATTCTTTCTTT---------------GAAATAAAT---CAAACGAACAATAA-TAGAAAGTCTCTGTCATTATTTCC-ATCACTGTCTTCAACCCACC-TAGCTGAGTAttttcttttatctctacttact----tt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14881581 217 + 15034901 CCCTCTCAATCTAGTATTATCATTCTC-ATTATTAGTGAATAAGTCCCTTTTTGTTAAAAGTTTCCATTGAcctaccattgtccttcagttattaccttactttgtattctttcttt---------------gaaagaaat---caaaggaacaataa-tagaaagtctccatcagtatttcc-atcactgtcttcaacccacc-tagctgAGTAttttcttttatctctacttact----tt i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44000697 233 - 53741614 GTCTCTTACTTTACTAG-ATCATTCTC-CTTATTAATGAGTATTTCCTTTACTATTAAAAGTTTGTATTGACTTCTTATTTCTCTCTAGTTACCACCTCATTTTCTAACTTTCCTTTAAAGATGAAGAAGAAGAAAAAAATACACAATGAAAAAAGAATTAGGAAGTTTCCTTCAGTA------TGCATAGTCTTTAATCTAAT-TGTtttctttctttctttcttcttt-ctttctttcttt i canFam3.chr19 C 0 I 206 s dasNov3.JH569232 1670895 149 + 5974691 -----tgacttctgtagcaatatgctctcctgctagtacat-----ctatttcatcaattgttta------------------------ttattacatttttgttggttcctcctct---------------ccctgattt---taat-gtgctggca-tag------tctatcgatagattc-tgggttttcgtc---------tctgtagatatttt------------------------ i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=2695990.000000 s hg38.chr9_KI270719v1_random 8082 308 + 176845 ttccc--gcgtg---ttctcaagcattttcatgggtttaaaggccagttacatgatagcatctc---agaatatttcc-aattttggtatcttctctgaggtagagctttgcatagtcatctacttacttaatatcaaatgtgga--ttgttttatagacaactgaaatt--cataatgttttaagtag-agttttgttattttctcTGCTTCCCAgtttgtgtgtgtatgtttg-tttgtttACTTCAGCTGGTGTTCCCATTGATT-TTATCTTATCTAATACACCAAAACCCTATC----AGTAGC-T-GTTTTCTTCAAACTTGCA s panTro5.chr4 135035377 314 + 194502333 ttcccctgagtg---ttctcaagcattttcatgggtttaaaggccagttacatgatagcatctc---agaatatttcc-aattttggtatcttctctgagttagagctttgcatagtcatctacttacttaatatcaaatgtgga--ttgttttatagacaactgaaatt--cataatgttttaagtag-agttttgttattttctgtgcttcccagtttgtgtgtgtatgtttg-tttgtttacttcagctggtgttcccattgatt-ttatcttatctaatacaccaaaaccctatctatcagtagc-t-cttttcttcaaacttgca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 15945 310 - 70559 ttcccctgagtg---ttctcaagcattttcatgggtttaaaggccagttacatgatagcatctc---agaatatttcc-aattttggtatcttctctgagttagagctttgcatagtcatctacttacttaatatcaaatgtgga--ttgttttatagacaactgaaatt--cataatgttttaagtag-agttttgttattttctcTGCTTCCCAgtttgtgtgtgtatgtttg-tttgtttACTTCAGCTGGTGTTCCCATTGATT-TTATCTTATCTAATACACCAAAACCCTATC----AGTAGC-T-CTTTTCTTCAAACTTGCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429313 314 - 115148730 ttcccctgagtg---ttctcaagcattttcgtgggtttgaaggccatttacatgacagcatctc---agaatatttcc-aattttggtatcttctctgagttagagctttgcatagtcatctactcacttaatatcaaatgtgga--ttgttttatagacaactgaaatt--cataatgttttaagtag-aattttgttattttctctgcctcCCAgtttgtgtgtgtatgtttg-tttgtttACTTCAGGTGGTGTTCCCATTGATT-TTATCTTATCTAATACGCCAAAACGCTGTCTATCAGTAGC-T-CTTTTCTTCAAACTTGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131371741 318 + 190429646 ttcccc-gagtg---ttctcaagcattttcatgggtttaaaggccatttacatgatagcatctc---agaatatttcc-aattttggtatcttctctgagttagagcttgacatagtcatctacttacttaatatcAAATGTGGATTTTTTTTTATAGAAAACTGAAGTTCACATACTGTTTTAAGTAG-AATTTTGTTATTTTCTCTGCTTCCCAGTTTGTGTGTGTATGTTTGTTTTTTTTACTTCAGCTGGTGTTGCCATTGATT-TTATCTTATTCAATACGCCAAAACCCTATTTATCAGTAAC-T-CTTTTCTTCAAACTTGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130890487 316 + 189454096 ttcccc-gagtg---ttctcaagcattttcatgggtttaaaggccatttacatgatagcatctc---agaatatttct-aattttggtatcttctctgagttagagctttacatagtcatctacttacttaatatcAAATGTGGA-TTTTTTTTATAGAAAACTGAAGTTCACATACTGTTTTAAGTAG-AATTTTGTTATTTTCTCTGCTTCCCAGTTTGTGTGTGTATGTTTG-TTTTTTTACTTCAGCTGGTGTTGCCATTGATT-TTATCTTATTCAATACGCCAAAACCCTATTTATCAGTAAC-T-CTTTTCTTCAAACTTGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34881738 316 - 40319822 ttcccc-gagtg---ttctcaagcattttcatgggtttaaaggccatttacatgatagcatctc---agaatatttcc-aattttggtatcttctctgagttagagctttacatagtcatctacttacttaatatcAAATGTGGA-TTTTTTTTATAGAAAACTGAAGTTCACATACTGTTTTAAGTAG-AAATTTGTTATTTTCTCTGCTCCCCAGTTTGTGTGTGTATGTTTG-TTTTTTTACTTCAGCTGGTGTTGCCATTGATT-TTATCTTATTCAATACGCCAAAACCCTATTTATCAGTAAC-T-CTTTTCTTCAAACTTGCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4435928 316 - 9219162 ttcccc-gagtg---ttctcaagcattttcatgggtttaaaggccatttacatgatagcatctc---agaatatttcc-aattttggtatcttctctgagttagagctttacatagtcatctacttacttaatatcAAATGTGGA-TTTTTTTTATAGAAAACTGAAGTTCACATACTGTTTTAAGTAG-AATTTTGTTATTTTCTCTGCTTCCCAGTTTGTGTGTGTATGTTTG-TTTTTTTACTTCAGCTGGTGTTGCCATTGATT-TTATCTTATTCAATACGCCAAAACCCTATTTATCAGTAAC-T-CTTTTCTTCAAACTTGCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78961192 308 + 135778131 ttccct-gagtg---ttctcaagcattttcatgggtttaaaggccacttacatgatagtatctc---agaatatttcc-aattttggtatcttctctgagttagaactttacatagtcatctacttacttaataGCAAATGTGGA--TTGTTTTATGGAAAACTGAAGTT--CATACTGTTTTAAGTAG-AATtttgttattttctctgcttcccagtttgtgtgtgtatgtttg-tttgtttACTTCAGCTGGTGTTGCCATTGATT-TTATCTTATTCAATACGCCGAAACCCTATTTATCAGTAGC-T-CTTG-----AAACTTGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2727565 313 - 3013352 ttccct-gagtg---ttctcaagcattttcatgggtttaaaggccatttacatgatagcatctc------atatttcc-aattttggtatcttctctgagttagagctttacatagtcatctacttacttaatatcAAATGTGGA-TTTTTTTTATAGAAAACTGAAGTTCACATACTGTTTTAAGTAG-AATTTTGTTATTTTCTCTGCTTCCCAGTTTGTGTGTGTATGTTTG-TTTTTTTACTTCAGCTGGTGTTGCCATTGATT-TTATCTTATTCAATACGCCAAAACCCTATTTATCAGTAAC-T-CTTTTCTTCAAACTTGCA i manLeu1.NW_012103277v1 C 0 I 175 s colAng1.NW_012114544v1 5958986 313 + 8656713 tttccc-gagtg---ttctcaagcattttcatgggtttaaagaccatttacatgatagcatctc---agaatatttcc-aattttggtatcttctctgagttaaagctttacatagtcatctacttacttaatatcaaatgtgga--ttgttttatagaaaactgaagtt--catactgttttaagtag-aattttgttattttctcTGCTTCCCAgtttgtgtgtgtatgtttg-tttgtttACTTCAGCTGGTGTTGCCATTGATT-TTATCTTATTCAATACGCCAAAACCCTATTTATCAGTAGC-T-CTTTTCTTCAAACTTGCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129389065 311 - 190850796 ttcccc-gagag---ttctcaagcattttcgtgggtttaaaggccatttgcatggtaacgtctcctcagaatatttcc-aattctggtatcttctctcagtaatggctttgcatagtcatctacttacttaatatctaatgtgga--ttgtttaatacacaactgaaaTC--CATACAGTTTTGAGTAG-AATTTTGTTATTTTCTCTGCTTCCCAGATTGTGTA----TGTTTG-TTTGTTTACTTCACCTGGTGTTCCCACTGATTTTTATCT--TCTAAAATGCCCAAACCCTATCTATCAGTAGC-T-CTTTTCTTCAAATTTGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6472908 313 - 25294431 gtcccc-aagtg---ttctcaagcattttcgtgggtttaaaggccatttgcatgacaacgtctcctcagaatatttcc-aattttggaatcttctctgcgtaatggcttcacatagtcatctacttacttagtatctaaggtgga--tggttttatagacaactgaaatt--catactgttttaagtcg-aattttgttattttctctgcttcccagattgtgtg----tgtatg-tttgtttacttcacctggtgttcccattgatttttatcttatctaaaatgccaaaaccctatctatcagtaga-t-cttttcttcaaacttgca i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4028655 317 - 6311556 ttcccc-gagtg---ttctcaagcattttcgtgggtttaaaggccatttgcatgataacgtctcctcagaatatttccaaattttggtatcttctctgagtaatggcttcgcatagtcatctacttacttaatatctaatgtgga--tggttttatagacaactgaaatt--catactgttttaagcag-aattttgttattttctctgcttcccagattgtgtgtgtatgtttg-tttgtttacttcacctgatgttcccattgatttttatcttatctaaaacgccaaaaccctacctatcagtagc-t-cttttcttcaaa-ttgca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14881798 316 + 15034901 ttcccc-gagtg---ttctcaagcatttttgtgggtttaaaggccatttgcatgataacgtctcctcagaat-tttcc-aattttggtatcttctctgagtaatggctttgcatagtcagctacttacttaatatctaatgtgga--ttgttttatagacaactgaaatt--catactgttttaagtag-aattttgttattttctcTGCTTCCCAGATTGTGTGTGTATATTTG-TTTGTTTACTTCATCTGGTGTTCCTATTGATTATTATCTTATCTAAAATGCCAAAACCCTATCTATCAGTAGC-T-CTTTTCTTCAAACTTGCA i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44001136 285 - 53741614 -TCCCT-GAGTC---TTCTCATGCATTCCCA-GGGTTTAAAAGTCTTTTATGTTATGATTTCTC---AGAATATTTCC-AACTCTTAAAGTTTCTTC--GCTATATCCTGATACACTCATCT----GCTTCAGGTCTCATCTGGA--ATTGTTCATACGCAATTCAATTT--CTTGCTGTTTGAAATCG-AATTTTG----GTCCTCTGCTTC---------------ATTTTTC-TCCCCTTAC-CCAACTGGTG-GATCATTGATT-CTCTCTTATAGAATATTCCCCAAATCCATCCATTTTTCTTGT-TTTTTTTTCAGACTTTGA i canFam3.chr19 I 206 C 0 s dasNov3.JH569232 1671044 270 + 5974691 atcccc-aaatggtcttctcatgcattcacatagctttaaagaccatttatttagtgactgctcttcaaaatatctca-aaccctaatgtctcatat-aactatagccttgccgagtcatcttcttacttaatattttatcttag--atatttcacaagcacatcaaaat--cataatatttcaaatagaaattttg----gttctctgcttcaaaG-----------------A-TTT-----------------------CTGATT-CTGTCTTATAC----TACCAAA--CTTATTCTACAATATT-TCCTCTTCTTGAAACTTTAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=1155543.000000 s hg38.chr9_KI270719v1_random 8390 144 + 176845 CATATCTTAAATATGTATTTcattattttgaacaaggtctccaccttcttgtcctttcactttaatagttttctaattcatttccttgtgtttattcttgtcccagtaaaaattattcttggtttaagaggcagagATATATAT s panTro5.chr4 135035691 144 + 194502333 catatcttaaatatgtatttcattattttgaacaaggtctccaccttcttgtcctttcactttaatagttttctaattcatttccttgtgtttattcttgtccctgtaaaaattattcttggtttaagaggcagagATATATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 16255 144 - 70559 CATATCTTAAATATGTATTTcattattttgaacaaggtctccaccttcttgtcctttcactttaatagttttctaattcatttccttgtgtttattcttgtccctgtaaaaattattcttggtttaagaggcagagATATATAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429627 144 - 115148730 CATATCTTAAATATGTATTTCATTATTTTGAACAAGGTCTTCACCTTCTTGTCCTTTCACTTTAATAGTTTTCTAATTCGTTTCCTTGTGTTTATTCTTGTCCCTGTAAAAATTATTCTTGGTTTAAGAGGCAGTGATATATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131372059 143 + 190429646 TGTATCTTAAACATATATTTCATTATTTTGAACAAGGTCTCCACCTTCTTGTCCTTTCACTTTAATAGTTTTCTAATTCATTTCTTTGTGTTTATTCTTGTCCCTGTAAAAATTTTTCTTGG-TTAAGAGGCAGatatatatat i rheMac8.chr5 C 0 I 119 s macFas5.chr5 130890803 143 + 189454096 TGTATCTTAAACATATATTTCATTATTTTGAACAAGGTCTCCACCTTCTTGTCCTTTCACTTTAATAGTTTCCTAATTCATTTCTTTGTGTTTATTCTTGTCCCTGTAAAAATTTTTCTTGG-TTAAGAGGCAGatatatatat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34882054 143 - 40319822 TGTATCTTAAACATATATTTCATTATTTTGAACAAGGTCTCCACCTTCTTGTCCTTTCACTTTAATAGTTTTCTAATTCATTTCTTTGTGTTTATTCTTGTCCCTGTAAAAATTTTTCTTGG-TTAAGAGGCAGatatatatat i macNem1.NW_012010911v1 C 0 I 70 s cerAty1.NW_012000798v1 4436244 143 - 9219162 TGTATCTTAAACATATATTTCATTATTTTGAACAAGGTCTCCACCTTCTTGTCCTTTCACTTTAATAGTTTTCTAATTCATTTCTTTGTGTTTATTCTTGTCCCTGTAAAAATTTTTCTTGG-TTAAGAGGCAGatatatatat i cerAty1.NW_012000798v1 C 0 I 2 s chlSab2.chr7 78961500 144 + 135778131 TGTATCTTAAACATATATTTCATTATTTTGAACAAGGTCTCCACCTTCTTGTCTTTTCACTTTAATAGTTTTCTAATTCATTTCTTTGTGTTTATTCTTGTCCCTGTAAAAATTTTTCTTGGTTTAAGAGGCAGatatatatat i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5959299 144 + 8656713 TGTATCTTAAACATATATTTCATTATTTTGAACAAGGTCTCCACCTTCTTGTCCTTTCACTTTAATAGTTTTCTAATTCATTTCTTTGTGTTTATTGTTGTCCCTGTAAAAATTTTTCTTGGTTTAAGAGGCAGatatatatat i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129389376 143 - 190850796 TATATCTT-AATATATCTTTTATTATTTTGAACAAAATTTCTACCTTCTTGTCCCTTCACTTTAATCGTTTTCTCATTGGCTTCCTTGCGTTTATTCTTGTTCCTATGAAAATTATTCTTGGTTTAAGAGGCAGAGATATATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6473221 143 - 25294431 catatctt-aatatatctttcattattttgaacaaaatttccacattcttgtcccttcactttaatcgttttctcattggcttccttgtgtttattcttgctcctatgaaaattattcttggtttaagaggcagagATATACAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4028972 143 - 6311556 catatctt-aatatatctttcattattttgaacaaaatttccaccttcttttcccttcactttaatcattttttcattggcttccttgtgtttattcttgttcctatgaaaattattcttggtttaagaggcagagATATATAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14882114 142 + 15034901 TATATCTT-AATATATCTTTTATTACTTTGAACAAAATTTCCACCTTCTTGTCCCTTCACTTCAATCA-TTTCTCACTGGCTTCCTTGCATTTATTCTTGTTCCTATGAAAATTATTCTTGGTTTAAGAGGCAGAGATACATAT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44001421 130 - 53741614 CATCTCTTACATACATCTCCCATTATATTTAACAAAGACTCTATCTTCTCATGCTTTTACCTACATAATTTCCTAATTGGTTTTATTGTGTTTATTCTTGTTCCCCTGTGAATTATTCTTAGTTTAGAAA-------------- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1671314 133 + 5974691 CATATTTTAAATATATcttccattacactgaactaagatgccatccccttaagcttttacgtcagtagtttcctatctggtttccctgtgtttactcttgttcccatgaaaattattctaagtttaagaaata----------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I e manLeu1.NW_012103277v1 2727878 175 - 3013352 I a score=12726.000000 s hg38.chr9_KI270719v1_random 8534 5 + 176845 GTATT s panTro5.chr4 135035835 5 + 194502333 GTATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 16399 5 - 70559 GTATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429771 5 - 115148730 GTATT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130890946 5 + 189454096 ctgtt i macFas5.chr5 C 0 I 56 s cerAty1.NW_012000798v1 4436389 5 - 9219162 ctgtt i cerAty1.NW_012000798v1 I 2 I 83 s chlSab2.chr7 78961644 5 + 135778131 ctgtt i chlSab2.chr7 C 0 I 67 s colAng1.NW_012114544v1 5959443 5 + 8656713 ctgtt i colAng1.NW_012114544v1 C 0 I 68 s calJac3.chr3 129389519 5 - 190850796 GTATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6473364 5 - 25294431 GTATA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4029115 5 - 6311556 GTATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14882256 5 + 15034901 GTATA i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1671447 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44001551 0 - 53741614 C e otoGar3.GL873702 907483 14 - 3201129 I e manLeu1.NW_012103277v1 2727878 175 - 3013352 I e macNem1.NW_012010911v1 34882197 70 - 40319822 I e rheMac8.chr5 131372202 119 + 190429646 I a score=73871.000000 s hg38.chr9_KI270719v1_random 8539 12 + 176845 ATAAA-CACAGGG s panTro5.chr4 135035840 12 + 194502333 ATAAA-CACAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 16404 12 - 70559 ATAAA-CACAGGG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429776 12 - 115148730 ATAAA-CACAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131372321 12 + 190429646 ataaa-cacaggg i rheMac8.chr5 I 119 C 0 s macFas5.chr5 130891007 12 + 189454096 ataaa-cacaggg i macFas5.chr5 I 56 C 0 s cerAty1.NW_012000798v1 4436477 12 - 9219162 ataaa-cacagag i cerAty1.NW_012000798v1 I 83 C 0 s chlSab2.chr7 78961716 12 + 135778131 ATAAA-CACAGGG i chlSab2.chr7 I 67 C 0 s manLeu1.NW_012103277v1 2728053 12 - 3013352 ATAAA-CACAGGG i manLeu1.NW_012103277v1 I 175 C 0 s colAng1.NW_012114544v1 5959516 12 + 8656713 ATAAA-CACAGGG i colAng1.NW_012114544v1 I 68 C 0 s calJac3.chr3 129389524 13 - 190850796 ATAAATCACAGGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6473369 13 - 25294431 ATAAATCATAGGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4029120 13 - 6311556 ATAAATCACAGGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14882261 13 + 15034901 ATAAATCACAGGA i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1671447 4 + 5974691 ---------agag i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44001551 0 - 53741614 C e otoGar3.GL873702 907483 14 - 3201129 I e macNem1.NW_012010911v1 34882197 70 - 40319822 I a score=336479.000000 s hg38.chr9_KI270719v1_random 8551 55 + 176845 AAACAAATTAGATATAAACCAATTATTATAAACCAATGTAATAATAATA--ATATAT s panTro5.chr4 135035852 55 + 194502333 AAACAAATTAGATATAAACCAATTATTATAAACCAATGTAATAATAACA--ACATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 16416 53 - 70559 AAACAAATTAGATATAAACCAATTATTATAAACCAATGTAATAATAATA----ATAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429788 57 - 115148730 AAACAAATTAGATATAAACCAATTATTATAAACCAATATAATAACAATTATATATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131372333 54 + 190429646 aaacaaattagatataagccaattatcataaatcaatataataataata---tatat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130891019 54 + 189454096 aaacaaattagatataagccaattatcataaatcaatataataataata---tatat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34882267 54 - 40319822 aaacaaattagatataagccaattatcataaatcaatataataataata---tatat i macNem1.NW_012010911v1 I 70 C 0 s cerAty1.NW_012000798v1 4436489 54 - 9219162 aaacaaattagatataagccaattatcataaatcaatataataataata---tatat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78961728 54 + 135778131 AAACAAATTCGATATAAGCCAATTATCATAAATCAATATAATAATAATA---TATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2728065 54 - 3013352 AAACAAATTAGATATAAGCCAATTATCATAAATCAATATAATAATAATA---TATAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5959528 52 + 8656713 AAGCAAATTAGATATAAGCCAATTATCATAAATCAATATAGTAATA--A---TATAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129389537 50 - 190850796 AAACGAATTAGATATAAACCA---ATAGTAAACCAATATAATAATAATA----ATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6473382 50 - 25294431 AGACCAATTAGATATAAACCA---ATAGTAAACCAACACAATAATAATA----ATAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4029133 50 - 6311556 AAACCAATTAGATATAAACCA---ATAGTAAACCAATACAAGAATAATA----ATAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14882274 50 + 15034901 AAACCAATTAGATATAAACCA---ATAGTAAGCCAATACAATAATAATA----ATAT i aotNan1.NW_018507635v1 C 0 I 18 s dasNov3.JH569232 1671451 3 + 5974691 -----------------------------aaa------------------------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44001551 0 - 53741614 C e otoGar3.GL873702 907483 14 - 3201129 I a score=32952.000000 s hg38.chr9_KI270719v1_random 8606 17 + 176845 ATTACAtt---ttttt-----ct---tt s panTro5.chr4 135035907 20 + 194502333 ATTACAtt---ttttt-----ctatttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 16469 17 - 70559 ATTACttt---ttttc-----tt---tt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429845 21 - 115148730 ATTACATt---ttttctatg-ct---tt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131372387 22 + 190429646 atTACATT---TTTTCTATGCTT---TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130891073 22 + 189454096 atTACATT---TTTTCTATGCTT---TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34882321 22 - 40319822 atTACAtt---ttttctatgctt---tt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4436543 22 - 9219162 atTACAtt---ttttctatgttt---tt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78961782 22 + 135778131 ATTAAAtt---tgttctatgctt---tt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2728119 22 - 3013352 ATTACAtt---ttttctatgctt---tt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5959580 22 + 8656713 ATTACATT---TTTTCTATGCTT---TT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129389587 18 - 190850796 GTTACTTTTACTTTTCTA---------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6473432 18 - 25294431 GTTACTTTCACTTTTCTA---------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4029183 18 - 6311556 GTTACTTTTACTTTTCTA---------- i cebCap1.NW_016107420v1 C 0 C 0 s canFam3.chr19 44001551 14 - 53741614 ---ACGTT---TTTCCCCTT-------- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1671454 14 + 5974691 ---acatt---tttttcttt-------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I e aotNan1.NW_018507635v1 14882324 18 + 15034901 I a score=3503765.000000 s hg38.chr9_KI270719v1_random 8623 399 + 176845 tttatttcttctttttcttttttatttttt---GTAATGTAAGCAAGATTCTTTCCCTCCTTTGCCTTAAATCCTTTAGTTACTTGTGGAGTACAAT-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAATCAAAGGCACCATTCAAGACCCTCACTCCT----AACGAGACAGGGCTCTTTCCACTCTTGAAACACAGTTTTTCCCCATGTCAGGG-TTTTGCACAAGGTAACATCTTGTCTTTGAAGCTTCATAGTTTGGCTTGTTAATCAAATGGTTCCT--------TTTCCATATTTAAGTCATCACTTTACATTTCATTTTCTTGGAGAGGTCTTCGCATGACTCC-------------AAGC-----------TATCACCAGTT-ATGTGCTATTGTAGAACATGGTTTATCCAGAAATAGTG s panTro5.chr4 135035927 400 + 194502333 tttattttttctttttctttcttatttttt---gtaatgtaagtaagattctttccctcttctgctttaaatcctttagttacttGTGGAGTACAAAATTCAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAACCACAGGCACCATTCAAGCCCCTCACTCCT----AATGAGACAGGGCTCTTTCTACTCTTGAAACACAGTTTTTCCCCATGTCAGGG-TTTTGCACAAAGTAACATCTTGTCTTTGAAGCTTCATAATTTGGCTTGTTAATCAAATGGTTCCT--------TTTCCATATTTAAGTCATCACTTTACATTTCATTTTCTTGGAGAGGTCTTCGCATGACTCC-------------AAGC-----------TCTCACCAGTT-ATGTGCTATCATAGAACATGGTTTATCCAGAAATAGTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 16486 399 - 70559 tttatttcttctttttcttttttatttttt---GTAATGTAAGCAAGATTCTTTCCCTCCTCTGCCTTAAATCCTTTAGTTACTTGTGGAGTACAAT-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAACCACAGGCACCATTCAAGACCCTCACTCCT----AATGAGACAGGGCTCTTTCCACTCTTGAAACACAGTTTTTCCCCATGTCAGGG-TTTTGCACAAGGTAACATCTTGTCTTTGAAGCTTCATAGTTTGGCTTGTTAATCAAATGGTTCCT--------TTTCCATATTTAAGTCATCACTTTACATTTCATTTTCTTGGAGAGGTCTTCGCATGACTCC-------------AAGC-----------TATCACCAGTT-ATGTGCTATCGTAGAACATGGTTTATCCAGAAATAGTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90429866 397 - 115148730 ttaatttcttctttttcttttttattttTT---GTAATGTAAGTAAGGTTCTTTCCCTCCTCTGCCTTAAATCCTTTAGTTACTTGTGGAGTACAAT-TACAAGTC----TCTAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAACCACAGGCACCATTCAAGCCCCTCACTCCT----AATGAGACA-TGCTCTTTCCATTCTTGAAACACAGTTTTTCCCCATGTCAGGG-TTTTGCACAAGGTAACATCTTGTCTTTGAAGCTTCATAGTTTGGCTTGTCAATCAAATGGTTCCT--------TTTCCATATTTAAGTCATCACTTCACATTTCATTTTCTTGGAGAGATCTT-GCATGACTCC-------------AAGC-----------TATCACCAGAT-ATGTGCTATCGTAGAACATGGTTTATCCAGAAATAGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131372409 397 + 190429646 TTTCTTTCTTCTTTTC-GTTTTTATTTTTT---GTAATGTGACTAAGGCTCTTTCCCTCCTCTGCCTTAAGTCCTTTAGTTACTTGTGGAGTACAAT-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGTTCTGCTGTCTACAACAACAGGCACCATTCAAGCCCCTCAATCCT----AATGAGacagggctctttccattcttgaaacacagtttttccccatgtcaggg-tattgcacaaggcaacatcttgtcttggaagcttcatagttacgcttgtcgatcaaatggttcat--------tttccatatttaagtcatcactttacatttcattttcttcaagaggtctt-gcatgactcc-------------aagc-----------tatcaccagtt-atgtgttattgtagaacatggtttatccagaaatagtg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130891095 397 + 189454096 TTTCTTTCTTCTTTTC-GTTTTTATTTTTT---GTAATGTGACTAAGGCTCTTTCCCTCCTCTGCCTTAAGTCCTTTAGTTACTTGTGGAGTACAAT-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAACAACAGGCACCATTCAAGCCCCTCAATCCT----AATGAGACAGGGCTCTTTCCATTCTTGAAACACAGTTTTTCCCCATGTCAGGG-TATTGCACAAGGCAACATCTTGTCTTGGAAGCTTCATAGTTACGCTTGTCGATCAAATGGTTCAT--------TTTCCATATTTAAGTCATCACTTTACATTTCATTTTCTTCAAGAGGTCTT-GCATGACTCC-------------AAGC-----------TATCACCAGTT-ATGTGTTATTGTAGAACATGGTTTATCCAGAAATAGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34882343 397 - 40319822 tttctttcttcttttc-gtttttatttttt---GTAATGTGACTAAGGCTCTTTCCCTCCTCTGCCTTAAGTCCTTTAGTTACTTGTGGAGTACAAT-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAACAACAGGCACCATTCAAGCCCCTCAATCCT----AATGAGacagggctctttccattcttgaaacacagtttttccccatgtcaggg-tattgcacaaggcaacatcttgtcttggaagcttcatagttacgcttgtcgatcaaatggttcat--------tttccatatttaagtcatcactttacatttcattttcttcaagaggtctt-gcatgactcc-------------aagc-----------tatcaccagtt-atgtgttattgtagaacatggtttatccagaaatagtg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4436565 397 - 9219162 tttctttcttcttttt-gtttttatttttt---GTAATGTGACTAAGGCTCTTTCCCTCCTCTGCCTTAAGTCCTTTAGTTACTTGTGGAGTACAAT-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAACAACAGGCACCATTCAAGCCCCTCAATCCT----AATGAGacagggctctttccattcttgaaacacagtttttccccatgtcaggg-tattgcacaaggcaacatcttgtcttggaagcttcataattacgcttgtcgatcacatggttcat--------tttccatatttaagtcatcactttacatttcattttcttcaagaggtctt-gcatgactcc-------------aagc-----------tatcaccagtt-atgtgttattgtaaaacatggtttatccagaaatagtg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78961804 398 + 135778131 tttctttcttctttttcgtttttatttttt---GTAATGTGACTAAGGTTCTTTTCTTCCTCTGCTTTAAGTCCTTTAGTTACTTGTGGAGTACAAT-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAACAACAGGCACCATTCAAGCCCCTCAATCCT----AATGAGACAGGGCTCTTTCCATTCTTGAAATACAGTTTTTCCCCATATCAGGG-TATTGCACAAGGCAACATCTTGTCTTGGAAGCTTCATAGTTAGGCTTGTCGATCAAGTGGTTCAT--------TTTCCATATTTAAGTCATCACTTTACATTTCATTTTCTTCGAGAGGTCTT-GCATGACTCC-------------AAGC-----------TATCATCAGTT-ATGTGCTATTGTAGAACATGGTTTATCCAGAAATAGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2728141 397 - 3013352 tttctttcttcttttt-gtttttatttttt---GTAATGTGACTAAGGCTCTTTCCCTCCTCTGCCTTAAGTCCTTTAGTTACTTGTGGAGTACAAT-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAACAACAGGCACCATTCAAGCCCCTCAATCCT----AATGAGacaggactctttccattcttgaaacacagtttttccccatgtcaggg-tatcgcacaaggcaacatcttgtcttggaagcttcatagttacgcttgtcgatcacatggttcat--------tttccatatttaagtcatcactttacatttcattttcttcaagaggtctt-gcatgactcc-------------aagc-----------tatcaccagtt-atgtgttattgtagaacatggtttatccagatatagtg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5959602 396 + 8656713 TTTCTTTCTTCTTTTTCGTTTTTATTTTTT---GTAAGGTGACTAAAGTTCTTTCCCTCCTCTGCCTTAAGTCCTTTAGTTACTTGTGGAGTACAAT-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTGTCTACAACAACAGGCACCATTCAAGCCCCTCAATCCT----AAT--GACAGGGCTCTTTCCATTCCTGAAACATAGCTTTTCCCCATGTCAGGG-TGTTACACAAGGCAACATCTTGTCTTGGAAGCTTCATAGTTAGGCTTGTCGATCAAATGGTTCAT--------TTTCCATATTTAAGTCATCACTTTACATTTCATTTTCTTCGAGAGGTCTT-GCATGACTCC-------------AAGC-----------TATCACCAGTT-ATGTGCTATTGTAGAACATGGTTTATCCAGAAATAGTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129389605 404 - 190850796 TCCGTTTTTTCTTTCTTAATTTTCTGTTTT---GTAATGTAACTAAAGTTCTTTCCCTCCTCTGTCTTAAATCTTTGAGTTACTTGTGGAGTACAGC-TACAAATC----TCCAGGATACTAAAGCTC----------------TGCTCTGCTGTCTACATCCAGAGGCACTATTCAAGCCCCTCACTCTT----AATGAGGCAGGGTGCTTTCCATTCTTGAAACACAG-TTTTCCCCATGTCAGGG-TTTTGCACAAGGTAACATCTTGTCTTGTAAGCTTCATGGTTTGGCTTGTCAATCAAATGATTCCTTGATTCC-TCTCCATATTTAAGTTATCACTTTACATTTCATTTTCTAACAGAGGTCTT-CTATGACTCC-------------AAGC-----------TACCACCAGTT-ATGTGCTATTGTAGAACATAATTTATCCAGAAATAGCG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6473450 391 - 25294431 TCTGTTTTTTCTTTCTTAATTTTCTGTTTT---ATAATGTAACTAAGGATCTTTCCCTCCTCTGCCTTAAATCTTTGAGTTGCTTGTGGAGT--AAC-TACACATT----TCCAGGATGCTAAAGATC----------------TGCTCTGCTGTCTACATCCATAGGCA------------CTCACTTTT----AATGAGGCAGGGCGCTTTCCATTCTTGAAACACAGTTTTTCCCCATGTCAGGG-TTTTACACAAGGTACCATCTTGTCTTGGAAGCTTCATGGTTTGGCTTGTCAATCAAATGATTCCTTGATTCCTTCTCCGTATTTAAGTTATCACTTTACATTTCATTTTCTCACAGAGGTCTT-GTATGACTCC-------------AAGC-----------TATCACCAGTT-ATGTGCTGTTGTAGAACATAATCTATCCTGAAAT-GTG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4029201 406 - 6311556 TCTGTTTTTTCTTTCTTAATTTTCTGCTTT---GTAATGTAACTAAGGTTCTTTCCCTCCTCTGCCTTAAATCTTTGAGTTACTTGTGGAGTACAGC-TACAAATC----TCCAGGATGCTAAAGCTC----------------TGCTCTGCTATCTACATCCATAGGCACTATTCAAGCCCCTCACACTT----AATGAAGCAGGGCGCTTTCCATTCTTGAAACACAGTTTTTTCCCATGTCAGGG-TTTTGCACAAGGTAACATCTTGTCTTGGAAGCTTCATGGTTTGGTTTGTCAATCAAATGATTCCTTGATTCCTTCTCCATATTTAAGTTATCACTTTACATTTCACTTTCTCACAGAGGTCTT-GTATGACTCC-------------AAGA-----------TATCAACAGTT-ATGTGCTATTGTAGAACATAATTTATCCAGAAATAGTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14882342 407 + 15034901 TCCATTTCTTCTTTCTTAATTTTCTGTTTT---GTAATGTAACTAAGGTTCTTTCCCTCCTCTGCCTTAAATCTTTGAGTTACTTGTAGAGTACAGC-TACAAATC----TCCAGGATGCTACAGCTC----------------TGCTCTGCTGTCTACATCCATAGGCACTATTCAAGCCCCTCACTCTT----AATGAGGCAGGTTGCTTTCCATTCTTGAAACACAGTTTTTCCCCATGTCAGGG-TTTTGCACAAGGTAACATCTTGTCTTGGAAGCTTCATAGTTTGGCTTGTCAATCAAATGATTCCTTGATTCCTTCTCCATATTTAAGTTATCACTTTACATTTCATTTTCTCACAGAGGTCTT-ATATGACTCC-------------AAGC-----------TATCACCAGTTAATGTGCTACTGTAGAACATAATTTATCCAGAAATAGTG i aotNan1.NW_018507635v1 I 18 C 0 s canFam3.chr19 44001565 395 - 53741614 --------------------------TTTA---AAAATGTAACTAGCATACTTTCCCTCTTCTGCCTCAAATCCTTTAATTACCTGTGGAATACGAT-TATAAATCCTCTTCCAAGATGCCAAAGCCCTCCATGACATGAACCATGCTTTGTTCTCTAC--CCACAGGTACCTCTTAATGCCCTAGTTCTTTGTAAGTTAGACAGAACAGTCACATTTTTTT-------TTTTTTTTCTATTCCAGGGATTTTGCATAAGTTAACACCTTGTCTTGAAAGACTCATTGTTTGGCTCTTAAATCAAATTGTTTCT--------TTGTTATCCTAGAGTTACCATTTTATACTCCATTGTCTTGTAGAGCTCTT-GCCTCACTCCTTCAGCTCTCATTAAGTGTCATCACATATGTCACTAGTT-ATATGCTATTAT-----------TCTTCTGAA------ i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1671468 369 + 5974691 --------------------------ttttaaaaaaatataactaatatccattctttcctctgcttcaaatcctttaatTA--TGTGAAACACAAT-TCAAAATC-CATTGAAAGATGCGAAAGTCT-CCATGATATGAGTCTTAACTTGCTCTCTACTCCCATAAGTACCACTCAGCAACCT-GCTCTT----TGTGGGTCAAGGTT-TTTCCATTCTTAGAACACAA-TTTTCCCCTTTCCTGGT-ATTTGCTTAAGCAGATACCTTAACTTGATAGACTCCTA---TACCTCTCCAATCAAGTGGCTCCT--------TT----------AGTTTTCACTTCACATTTCATTTTCTCAGAAAGGACTT-ACCTGATTCC-------------ATGG-----------TGATACAAAAT-ACAAGATATCACAGAGCATTGTTTATTTCTTC------ i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907483 14 - 3201129 I a score=445190.000000 s hg38.chr9_KI270719v1_random 9022 56 + 176845 ATAACTTTCATCACTATTGATCATTCTTTGGTT--T---TCTTTACATTTATTTTATATCT s panTro5.chr4 135036327 56 + 194502333 ATAACTTTCATCACTATCTGTCATTCTTTGGTT--T---TCTTTACATTTATTTTATATCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 16885 56 - 70559 ATAACTTTCATCACTATTGATCATTCTTTGGTT--T---TCTTTACATTTATTTTATATCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430263 56 - 115148730 ATAACTTTCATCACTATCTATCATTCTTTGGTT--T---TCTTTACATTTATTTTATATCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131372806 56 + 190429646 ataacttttatcactatctatcattcattggtt--c---tgtttacattgattttatatct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130891492 52 + 189454096 ATAACTTTTATCA----CTATCATTCATTGGTT--T---TGTTTACATTGATTTTATATCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34882740 56 - 40319822 ataacttttatcactatctatcattcattggtt--t---tgtttacattgattttatatct i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4436962 56 - 9219162 ataacttttatcactatctatcattcattggtt--t---tgtttacattgattttatatct i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78962202 56 + 135778131 ATAACTTTTATCACTATCTATCATTCATTGGTT--T---TGTTTACATTGATTTTATATCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2728538 52 - 3013352 ataacttttatca----ctatcattcattggtt--t---tgtttacattgattttatatct i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5959998 54 + 8656713 ATAACTTTTATCACTA--TATCATTCATTGGTT--T---TGCTTACATTGATTTTATATCT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129390009 54 - 190850796 ATAACTTTCGTAA----CTATCTTTCTTTGCTTAAT---TGTTTACATTTATTTTATATCT i calJac3.chr3 C 0 I 580 s saiBol1.JH378129 6473841 53 - 25294431 ATAACTTTCATAA----CTATTATTCTTTGCTTATT---TGTTTACATTTATTTTCTATC- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4029607 54 - 6311556 ATAACTTTCATAA----CTATTATTCTTTGCTTATT---TGTTTACATTTATTTTATATCT i cebCap1.NW_016107420v1 C 0 I 540 s aotNan1.NW_018507635v1 14882749 54 + 15034901 ATAACTTTCATAA----CTATTATTCTTTGCTTATT---TGTTTACATTTATTTTATATCT i aotNan1.NW_018507635v1 C 0 I 254 s otoGar3.GL873702 907497 55 - 3201129 ATAACTTTCATTGTAATCTATCATTATTTTATT------TGTTGACACTTACTTTATGCTT i otoGar3.GL873702 I 14 C 0 s canFam3.chr19 44001960 55 - 53741614 ----TTTTCATCACATTCTTTCAATCTTTTGCT--TAAATATTTACACTTATTTCACATAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1671837 55 + 5974691 ATAACTTTTATAAAGATATTTCA-TCATTTTTC--T---TGTTTGCTTTTAATTTTTATCT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I a score=66939.000000 s hg38.chr9_KI270719v1_random 9078 9 + 176845 TAAACACTG---- s panTro5.chr4 135036383 9 + 194502333 TAAACACTG---- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 16941 9 - 70559 TAAACACTG---- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430319 9 - 115148730 TAAACACTG---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131372862 9 + 190429646 taaacacta---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130891544 9 + 189454096 TAAACACTA---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34882796 9 - 40319822 taaacacta---- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4437018 9 - 9219162 taaacacta---- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78962258 9 + 135778131 TAAACACTG---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2728590 9 - 3013352 taaacacta---- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5960052 9 + 8656713 TAAATACTG---- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129390643 8 - 190850796 TAAGCACT----- i calJac3.chr3 I 580 C 0 s saiBol1.JH378129 6473894 9 - 25294431 TAAATATTG---- i saiBol1.JH378129 C 0 I 552 s otoGar3.GL873702 907552 9 - 3201129 TAAACACTG---- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44002015 9 - 53741614 TAGACACTG---- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1671892 13 + 5974691 TAGACATTGAATG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4029661 540 - 6311556 I a score=1089814.000000 s hg38.chr9_KI270719v1_random 9087 144 + 176845 TAATATAAAAGACCTC-----AGGGATGGAC---------------CATGAATTTTAT-ATTTAGCACAATACTTCAGAAGATCCAT-AC-TA-TCCTTTTTCTTTTTTATTCATTTTAttttaaaattttcattttgaactactttaaagcttacaaaaatatattt s panTro5.chr4 135036392 143 + 194502333 TAATATAAAAGACCTC-----AGGGATGGAC---------------CATGAATTTCAT-ATTTAGCACAATACTTCAGAAGATCCAT-AC-TA-TCCTTTTTCTTTTTTATTCATTTTAttttaaaattttcactttgaaataatt-aaagcttacaaaaatatattt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 16950 144 - 70559 TAATATAAAAGACCTC-----AGGGATGGAC---------------CATGAATTTCAT-ATTTAGCACAATACTTCAGAAGATCCAT-AC-TA-TCCTTTTTCTTTTTTATTCATTTTAttttaaaattttcattttgaactactttaaagcttacaaaaatatattt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430328 144 - 115148730 TAATATAAAAGACCTC-----AGGGATGAAC---------------CATGAATTTCAT-ATTTAGCACAATACTTCAGAAGATCCAT-AC-TA-TCTTTTTTGTTTTTTATTCATTTTAttttaaaattttcattttgaactactttcaagattacaaaaatatattt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131372871 159 + 190429646 taatataaaagacctc-----agggatggaccatgaatttcatattcatgaatttcat-atttagcacAATACTTCAAAAGATCCAT-AC-CA-TCCTTTTTCTCTTTCATTCATTTTAttttaaaattttcattttgaactactttcacgcttacaaaaatatattt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130891553 159 + 189454096 TAATAAAAAAGACCTC-----AGGGATGGACCATGAATTTCATATTCATGAATTTCAT-ATTTAGCACAATACTTCAAAAGATCCAT-AC-CA-TCCTTTTTCTCTTTCATTCATTTTAttttaaaattttcattttgaactactttcacgcttacaaaaatatattt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34882805 159 - 40319822 taatataaaagacctc-----agggatggaccatgaatttcatattcatgaatttcat-atttagcacAATACTTCAAAAGATCCAT-AC-CA-TCCTTTTTCTCTTTCATTCATTTTAttttaaaattttcattttgaactactttcacgcttacaaaaatatattt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4437027 159 - 9219162 taatataaaagacctc-----agggatggaccatgaatttcatattcatgaatttcat-atttagcacAATACTTCAAAAGATCCAT-AC-CA-TCCTTTTTCTCTTTCATTCATTTTAttttaaaattttcattttgaactactttcacgtttacaaaaatatattt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78962267 155 + 135778131 TAATATAAAAGACCTC-----AGGGATGGACCATGAATTTCATATTCATGAATTTCAT-ATTTAGCAAAATACTTCAAAAGATCCAT-AC-TA-TCCTTTTTCTCT----TTCATTTTAttttaaaattttcattttgaactactttcatgcttacaaaaatatattt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2728599 159 - 3013352 taatataaaagacctc-----agggatggaccatgaatttcatattcatgaatttcat-atttagcacAATACTTCAAAAGATCCAT-AC-CA-TCCTTTTTCTCTTTCATTCATTTTAttttaaaattttcattttgaactactttcacgcttacaaaaatatattt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5960061 154 + 8656713 TAATATAAAAGACCTC-----AGGGATGGACCATGAATTTCATATTCATGAATTTCAT-ATTTAGGACAATATTTCAAAAGATCCAT-AC-TA-TCCTTTTTCTCTTTCATTC-----ATTTtaaaattttcattttgaattactttcacatttacaaaaatatattt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129390651 124 - 190850796 -AGTATAAAAGACCTC-----AGGGATGGAC---------------CAGGAATTTC-------------ATATTTCGGAAGATTAAT-AC-TA-TTGTTTTTCTTTTTTATTCATTTTAttttaaaagtttcattctgagctaccttcaagcttatagaaa------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6474455 138 - 25294431 TAATATAAAAGACCTC-----AGGGATGGAC---------------CATGAATTTCGTAATTTAGCCCAATATTTCGGAAGATTAAT-AC-TA-TTGTTTTTCTTTTTTATTCACTTTAttttaaaattttcgttttgagctaacttcaagcttatagaaa------- i saiBol1.JH378129 I 552 C 0 s cebCap1.NW_016107420v1 4030201 138 - 6311556 TAATATAAAAGACCTC-----AGGGGTGGAC---------------CATGAATTTCATAATTTAGCCCAATATTTCAGAAGATTAAT-AC-TA-TTGTTTTTCTTTTTTATTCATTTTAttttaaaatttttattttgagctaccttcaagcttatagaaa------- i cebCap1.NW_016107420v1 I 540 C 0 s otoGar3.GL873702 907561 146 - 3201129 TAATATAAAATATCTA-----AGGAATAAAC---------------CATGAATCTCATAATTTACTATAGTTCTTCAGAAGATTAAG-AC-TACTGTTTTTTCTTCATTATATATTTTAATTTTACATTTCCCTTTTAAAGTCATTTCAGACTTGGAAAAACATCTTT i otoGar3.GL873702 C 0 I 156 s canFam3.chr19 44002024 137 - 53741614 --CTATATAAGAGCTCCATATATGGATGGAT---------------GGTGAGTTTCCTAATTTAGCACAATGCTTAATAAAATTAAA-AAGTA-TTCTTTTCTTCT-------ACataattttaaaatattaatttCAAAAGAATTTCAGACTTGAGCAAATT----- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1671905 110 + 5974691 TATTATAAAACTTGTT-----AGAGATGGGC---------------CATGAATTTCATAATTTAACACATTGCTTGAAAATATTAATGAA-TG-T-----------------------ATTTTAAAAttt--attttgaaataatttcaggcttata----------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I a score=391251.000000 s hg38.chr9_KI270719v1_random 9231 54 + 176845 taaaaaatca----agagttcctatatattcttcacccagc-ttcttgactgctaacac s panTro5.chr4 135036535 54 + 194502333 taaaaaatca----agaattcctatatattcttcacccagc-ttcttgattgctaacac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 17094 54 - 70559 taaaaaatca----agaattcctatatattcttcacccagc-ttcttgactgctaacac i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430472 54 - 115148730 taaaaaatca----agaattcctatatattcttcacccagc-ttcttgactgctaacac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131373030 54 + 190429646 aaaaaatcca----agaattcctatatattcttcacccagc-ttcttgactactaacac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130891712 54 + 189454096 aaaaaatcca----agaattcctatatattcttcacccagc-ttcttgactactaacac i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34882964 54 - 40319822 aaaaaatcca----agaattcctatatattcttcacccagc-ttcttgactactaacac i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4437186 54 - 9219162 aaaaaatcca----agaattcctatgtattcttcacccagc-ttcttgactactaacac i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78962422 54 + 135778131 aaaaaatcca----agaattcctatatattcttcacccagc-ttcttgactacaaacac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2728758 54 - 3013352 aaaaaatcca----cgaattcctatatattcttcacccagc-ttcttgactactaacac i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5960215 54 + 8656713 aaaaaatcca----agaattcctatatattcttcatccagc-ttcttgactactaacac i colAng1.NW_012114544v1 C 0 I 990 s calJac3.chr3 129390775 46 - 190850796 -aaaattcca----agaattcctatatattctttatccagc-ttc-------ttaacac i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6474593 53 - 25294431 -aacattcca----agaattcctgtatattctttacccagc-ttcttaactattaacac i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4030339 53 - 6311556 -aaaattcca----agaattcctatatattctttacccagc-ttcttaactattaacac i cebCap1.NW_016107420v1 C 0 C 0 s canFam3.chr19 44002161 50 - 53741614 TACAAAACTATTGCCAAGTTActttacttactttcccca---------aatattggcat i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1672015 46 + 5974691 ---------a----ataattcctatctattcttcattttgctttcccaagtattaatgc i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I a score=363139.000000 s hg38.chr9_KI270719v1_random 9285 59 + 176845 ca-atcta--agagtacagtta--ctcacattaggaaattgatatggaattagttacttaccta s panTro5.chr4 135036589 60 + 194502333 catatcta--agagtacagtta--ctcacattaggaaattgatatggaattggttacttaccta i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 17148 60 - 70559 catatcta--agagtacagtta--ctcacattaggaaattgatatggaattagttacttaccta i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430526 62 - 115148730 catatcta--agagtacagttagtataacattaggaaattcatatggaattggttacttaccta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131373084 62 + 190429646 tgtacctaagagagcacattta--ctaacattaggaaattaatgtggaattagatacttaccca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130891766 62 + 189454096 tgtacctaagagagcacattta--ctaacattaggaaattaatgtggaattagatacttaccca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34883018 62 - 40319822 tgtacctaagagagcacattta--ctaacattaggaaattaatgtggaattagatacttaccca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4437240 62 - 9219162 tgtacctaagaaagcacattta--ctaacattaggaaattaatgtggaattagatacttaccca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78962476 60 + 135778131 tgtaccta--aaagcacagtta--ctaacattaggaaattaatgtggaattagatacttaccca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2728812 62 - 3013352 tgtacctaagagagcacattta--ctaacattaggaaattaatgtggaattagatacttaccca i manLeu1.NW_012103277v1 C 0 C 0 s calJac3.chr3 129390821 60 - 190850796 tgtaccta--agagtacagtga--ctaacattaggaaattgatatggaattagttactaaccta i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6474646 60 - 25294431 tgtgccta--agagtacagtta--ctaatattaggaaattgatatggaattagttactaaccta i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4030392 60 - 6311556 tgtatcta--agagtacagtta--ctaacattaggaaattgatatggaattagttactaaccta i cebCap1.NW_016107420v1 C 0 I 887 s canFam3.chr19 44002211 52 - 53741614 catacaca--gtaacataatta--tt--------gaaatttatatgatattagtcattaggcta i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1672061 60 + 5974691 cttacata--acagtgcatgta--ttgaaattaagaaatcgatattgttttggtaattaatcta i dasNov3.JH569232 C 0 I 11 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I a score=406113.000000 s hg38.chr9_KI270719v1_random 9344 66 + 176845 ca-------------tattttgttcatggttccactaatgttttttaactaggatcaaaatcagggtcacatattgcat s panTro5.chr4 135036649 79 + 194502333 cagaccttatttacatattttgttcatggttccactaacgttttttaactaggatcaaaatcagggtcacatattgcat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 17208 79 - 70559 cagaccttatttacatattttgttcatggttccactaatgttttttaactaggatcaaaatcagggtcacatattgcat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430588 79 - 115148730 cagaccttatttacatattttcttcatggttccaccaatgttctttaactaggatcaaaatcagggtcacatgttgcat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131373146 78 + 190429646 cagactttatttacatatactgtccgtgactccactaatgatctttaacta-gatcaaaatcagggtcacatattgcat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130891828 78 + 189454096 cagactttatttacatatactgtccgtgactccactaatgatctttaacta-gatcaaaatcagggtcatatattgcat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34883080 78 - 40319822 cagactttatttacatatactgtccgtgactctactaatgatctttaacta-gatcaaaatcagggtcacatattgcat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4437302 78 - 9219162 caaaccttatttacatatactgtctgtgactccactaatgatctttaacta-gatcaaaatcagggtcacatattgcat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78962536 78 + 135778131 caaacgttatttacatatattgtctgtggttccactaatgatctttaacta-gatcaaaatcagggtcacatattgcat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2728874 78 - 3013352 caaaccttatttacatatactgtccgtgactccactaatgatctttaacta-gatcaaaatcagggtcacatattgcat i manLeu1.NW_012103277v1 C 0 C 0 s calJac3.chr3 129390881 68 - 190850796 cagaccttatttacatattttattcatggttacaccaatgaccttt-----------aaattaggatcacatattgcat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6474706 68 - 25294431 cagaccttagttatatattttattcatgattacactaatgactttt-----------aaattaggatcacatattgcat i saiBol1.JH378129 C 0 C 0 s canFam3.chr19 44002263 75 - 53741614 cagacctgattcacatttttta---atgcttcagctaatgatccttgacca-ggtccaaaacaaggtcacctattacat i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1672132 66 + 5974691 -------------cacattttgtcaataatcccactaatgatctttgaccaggatcaaaattacagccacatattgcat i dasNov3.JH569232 I 11 I 13791 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I a score=188455.000000 s hg38.chr9_KI270719v1_random 9410 31 + 176845 ttatctgctacatttctttagtcttctttat s panTro5.chr4 135036728 31 + 194502333 ttagctgctatatttctttagttttctttat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 17287 31 - 70559 ttatctgctacatttctttagttttctttat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430667 31 - 115148730 ttacttgctacatttgtttagttttctttat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131373224 31 + 190429646 ttagttgctacatttctttagttttctttat i rheMac8.chr5 C 0 I 859 s macFas5.chr5 130891906 31 + 189454096 ttagttgctacatttctttagttttctttat i macFas5.chr5 C 0 I 859 s macNem1.NW_012010911v1 34883158 31 - 40319822 ttagttgctacatttctttagttttctttat i macNem1.NW_012010911v1 C 0 I 858 s cerAty1.NW_012000798v1 4437380 31 - 9219162 ttagttgctacgtttctttagttttctttat i cerAty1.NW_012000798v1 C 0 I 857 s chlSab2.chr7 78962614 31 + 135778131 ttagttgctacatttctttagttttctttat i chlSab2.chr7 C 0 I 858 s manLeu1.NW_012103277v1 2728952 31 - 3013352 ttagttgctacgtttctttagttttctttat i manLeu1.NW_012103277v1 C 0 I 857 s calJac3.chr3 129390949 31 - 190850796 ttagttcctacatttctctagttttctctat i calJac3.chr3 C 0 I 816 s saiBol1.JH378129 6474774 31 - 25294431 ttagttgctacatttctctagttttctctat i saiBol1.JH378129 C 0 I 834 s canFam3.chr19 44002338 31 - 53741614 ttagttactacatttctttagcttttttaaa i canFam3.chr19 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I a score=16239.000000 s hg38.chr9_KI270719v1_random 9441 70 + 176845 ctgggtgcggtggctcatgcctgtaagcccagcactttgggaggccaaggcgggcggatcacgaggacag s panTro5.chr4 135036759 70 + 194502333 tcgggcgcagtggctcacacctgtaatcccagcactttgggaggccgaggcaggcggatcacgatgacaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 17318 61 - 70559 tcgg--gcggtggctca--cctgtaat-ccagcactttgggaggccgag---gggggatcacgaggaca- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430698 69 - 115148730 tcaggcgtggtggctcacgcctgtaatcccagcactttgggaagccaaggc-agcggatcacgaggacag i nomLeu3.chr7b C 0 C 0 s canFam3.chr19 44002369 11 - 53741614 -----------------------------------------------------------ttctaggacag i canFam3.chr19 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e saiBol1.JH378129 6474805 834 - 25294431 I e calJac3.chr3 129390980 816 - 190850796 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I e manLeu1.NW_012103277v1 2728983 857 - 3013352 I e chlSab2.chr7 78962645 858 + 135778131 I e cerAty1.NW_012000798v1 4437411 857 - 9219162 I e macNem1.NW_012010911v1 34883189 858 - 40319822 I e macFas5.chr5 130891937 859 + 189454096 I e rheMac8.chr5 131373255 859 + 190429646 I a score=91651.000000 s hg38.chr9_KI270719v1_random 9511 202 + 176845 gagatagaaaccatcctggctaaaacggtgaaactccgtctctactaaaaatacaaaaaa-ttagc-tggcgtggtggcgggcacctgtagtcctagctacttgggaggctgaggcaggaaaatggcatgaacccaggag---gcggagcttgcagtgagcagagatcatgcctctgcactccagccttggcaacagtgcaagactc s panTro5.chr4 135036829 204 + 194502333 aagatggagaccatcctggctaaaacggtgaaaccccgtctctactaaaagtacaaaaaaattagcctggcgtggtggtgggcacctgtagtcccagctacttgggaggctgaggcaggaaaatggcgtgaacccaggag---gcggagcttgcagtgagcagagatcgggcctctgcactccagcctgggcaacagtgcaagactc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 17379 199 - 70559 gagatggagaccatcct-gctaaaacggtgaaac-ccgtctctactaaaa-tacaaaaaa-ttaac-tggcgtggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggaaaatggcgtgaacccgggag---gcggagctttcagtgagcagagatcacgcctctgcactccagccttggcaacagtgcaagactc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430767 204 - 115148730 gagatcgagaccatcctggctaacatggtgaaaccccatctctactaaaagtacaaaaaa-ttagccgggagtggtggcgagcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaggt--ggaattcgcagagcttgcagtaagcagagatcacacctctgcactccagcctgggcaacagtgcaagactc i nomLeu3.chr7b C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44002380 0 - 53741614 C e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e saiBol1.JH378129 6474805 834 - 25294431 I e calJac3.chr3 129390980 816 - 190850796 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I e manLeu1.NW_012103277v1 2728983 857 - 3013352 I e chlSab2.chr7 78962645 858 + 135778131 I e cerAty1.NW_012000798v1 4437411 857 - 9219162 I e macNem1.NW_012010911v1 34883189 858 - 40319822 I e macFas5.chr5 130891937 859 + 189454096 I e rheMac8.chr5 131373255 859 + 190429646 I a score=173684.000000 s hg38.chr9_KI270719v1_random 9713 287 + 176845 catctcaaaaaaaaaaaaa--tgttaaaaaagaaaattcagcttttctttttgtctttcatgcccttgatacttgt------tttttgtagattattctgaagtttgatttttt-tctaatatttcttcatggttaaattcacataatatattttggcaagaatgccacaatgccgaggttgtccttctcagtgcatcatatcaggaggcacatgatatcatcgtgtcctaatactgttgacgttaactctgatcacttgaataagatattgtctgccacatttctccacttcaaa s panTro5.chr4 135037033 290 + 194502333 catctcaaaaaaaaaaaaaaatgttaaaaaagaaaattcagcttttctttttgtctttcatgcccttgatacttgc------tttttgtagattattctgaagtttgattttttgtctaatatttcttcatggttacattcacataatatattttggcaagaatgccacaatgccgaagttgtccttctcagtgcatcatatcaggaggcacatgatatcatcgtgtcctaatattgttgacattaactctgatcacttgcataagatattgtctgccacatttctccacttcaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 17578 285 - 70559 catctcaaaaaaaaaaa----tgttaaaaaagaaaattcagcttttctttttgtctttcatgcccttgatacttgt------tttttgtagattattctgaagtttgatttttt-tctaatatttcttcatggttaaattcacataatatattttggcaagaatgccacaatgccgaggttgtccttctcagtgcatcatatcaggaggcacatgatatcatcgtgtcctaatattgttgacgttaactctgatcacttgaataagatattgtctgccacatttctccacttcaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90430971 279 - 115148730 catctcaaaaaaaaaaaa---tgtt---aaagaaaattcagcttttctgtttttctttcatgcccttgatacttgt------tttttgtagattattctgaagtttgattttt--tctaatatttcttcatggttaaagtcacataatatattttggcaagaacaccacaatgccgaggttgtc---ctcagtgcatcatatcaggaggcacatgatatcatcgtgtcctaatattgttgacattaactttgatcacttgaataagatattgtctgccacatttctccactttaaa i nomLeu3.chr7b C 0 C 0 s canFam3.chr19 44002380 252 - 53741614 -----------------------------------tttctcaatttttctttgactttcatgacctaaatatttttaaagaatactaacaagatactctgaaagttgagtttt--tctgatatttcctgatggctaaattcagatcatatatt-----gacaatatcagaatactgagcttgctttttttagtgcatcatatcaggatgcacacgatatcaccatgtcccatttttgattctggtaactcctatcac--agttacggtattccttactagatctctctattttaaa i canFam3.chr19 C 0 I 213 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e saiBol1.JH378129 6474805 834 - 25294431 I e calJac3.chr3 129390980 816 - 190850796 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I e manLeu1.NW_012103277v1 2728983 857 - 3013352 I e chlSab2.chr7 78962645 858 + 135778131 I e cerAty1.NW_012000798v1 4437411 857 - 9219162 I e macNem1.NW_012010911v1 34883189 858 - 40319822 I e macFas5.chr5 130891937 859 + 189454096 I e rheMac8.chr5 131373255 859 + 190429646 I a score=456772.000000 s hg38.chr9_KI270719v1_random 10000 814 + 176845 gttaccatttttaaaatcagtattttgttgagagatacttggagattatgtaaatatcttgtttctcataattgtatccac--taattttagcagacttg-tctgcaacaattatatggtatttgccaagaaatgagaatctatttccactattctttctatatttattgattagaattctactgtatggaaaagctttcctttgtcccactttt-cttatttatccaattatttatttatattagtgtggattcatgtgtatttggtttaattaatctgaataatctattgccatcattatttattcccttgctcaatttatctcagtttgtgtcactgagagccacttctagttagctcctatgttctttggcatgtctccatcattagttgagacttccttattttcttaacaacaacagatgtctcagacccattttgttctttctgccgcatgcacctagaatcaggcattgatccaagcagctctgtatccttttaacgaagaaaaaagtgaatccaagatttgaatgctagatgtgctgattgctattaaaatgttattgcttcta-gtcttagtggttaaaattaagaaatatacacacattcggccgggcgctgtggctcacacctgtaatcccagcactttgggaggccaagatgggcggattatgaggtcagaagattgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaacattagctgggcgtggtggcaggtgcctgtagtcccagctacttgggagactgaggcaggagaatggcatgaatcca s panTro5.chr4 135037323 814 + 194502333 gttaccatttttaaaatcagtattttgttgagagatacttggagattatgtaaatatctcgtttctcataattgtatccac--taattttagtagacttg-tctgcaacaattatatggtatttgccaagaaatgagaatctatttccagtattctttctatatttattgattagaattctactgtatggaaaagctttcctttgtccccctttt-cttatttctcccattatttatttatattagtgtggattcatgtgtatttggtttaattaatctgaataatctattgccatcattatttattcccttgctcaatttatctcagtttgggtcactgagagccacttctagttagttcctatgttctttggcatgtctccatcattagttgagacttccttattttcttaacaacaacagatgtctcagacccattttgttctttctgccccatgcacctagaatcaggcattgatccaaggagctctgtatccttttaaagaagaaaagagtgaatccaagatttgaatgctagatgtactgattgctattaaaatgttattgcttcta-gtcttagtggttaaaattaagaaatatacacacattaggccaggcgctgtggctcacacctgtaatcccagcactttgggaggccgagatgggcagattatgaggtcagaagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaaaattagctgggcgtggtggcaggtgcctgtagtcccagctacttgggagactgaggcaggagaatggcatgaatcca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 17863 807 - 70559 gtta-catttttaaaatcagtattttgttgagagatacttggagattatgtaaatatcttgtttctcataattgtatccac--taattttagcagacttg-tctgcaacaattatatggtatttgccaagaaatgagaatctatttccagtattctttctatatttattgattagaattctactgtatggaaaagctttcctttgtcccactttt-cttatttatccaattatttatttatattagtgtggattcatgtgtatttggtttaattaatctgaataatctattgccatcattatttattcccttgttcaatttatctcagtttgggtcactgagagccacttctagttagctcctatgttctttggcatgtctccatcattagttgagacttccttattttcttaacaacaacagatgtctcagacccattttgttctttctgcc-catgcacctagaatcaggcattgatccaaggagctctgtatccttttaaagaagaaaa-agtgaatccaagatttgaatgctagatgtgctgattgctattaaaatgttattgcttcta-gtcttagtggtt-aaattaagaaatatacacacattcgg-cgggcgctgtggctcacacctgtaatcccagcactttgggaggccgagatggg--gattatgaggtcagaagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaattagctgggcgtggtggcaggtgcctgtagtcccagctacttgggagactgaggcaggagaatggcatgaatcca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90431250 813 - 115148730 gtta-ctattttaaaatcagtattttgttgagagatacttggagactatgtaaatatcttgtttctcataattgtatccac--taattttagcagacttg-tctgcaacaattacatggtatttgccaagaaatgagattctgtttccaccattcttcctgtatttattgattagaattctattatatggaaaagctttcctttgtccccctttt-cttatttatccaattatttatttatattagtgtggattcatatgtatttggtttaattaatctgaacaatctattgccatcattatttatgcccttgctcaatttatctcggtttgggtcactgagagccacttctagttagctcctatgttctttggcatgtctccatcattagttgagacttctttattttcttaacaacaacagatgtctcagacccattttgttctttctgccccatgcacctagaatcaggcattgatccaaggagctctgtttccttttaaagaagaaaaaagtgaatccaaaatttgaatgctaggtgtgctgattgctattaaaatgttattgcttctaggtcttagtggttaaaattaagaaatatacacacattcggccggatgcagtggctcacacctgtaatctcagcactttgggaggccgaggtgggcagattaagaggtcaggagatcaagaccatcctggctaacacagtgaaaccctgtatctactaaaaatacaaaaa-attggctgggcgtggtggcaggtgcctgtagtcccagctacttgggaggctggggcaggagaatggcgtgaacccg i nomLeu3.chr7b C 0 C 0 s canFam3.chr19 44002845 492 - 53741614 gttactatttttaatagaagtattttgttgtgataacctgagctactatgtaaatatcctgtttctcatcataatttcccccacaattttaacaattctgccctgaaaaaattatgtggtatttgccaaatactgagcttctatttcc---------tctacttttattaactagaattccaatatatggtaaatctttcctttctccccctttcatttatttattcaattac---tttatatcagtatggattgaagtgtatttggtttacttaatct--------tattgtc----------actttcttgctcaaattatcttaattttggctatttagaacaatattaaattaggtccaatattctttgacatgtctttatcatttatggaaactttcttattttctt-ccatcaaaagttgttctagactc-----------------------------------------------------------------------------------------------------------------------aacttgttctttcttt---gtcccag--------acttggaatcatgca-------------------ttgctc-------------------------------------------------------------------------------caaggagactcagt-tctgttaa-------------------------------------------------------------------tagaggaataacgtggatcca i canFam3.chr19 I 213 I 58 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e saiBol1.JH378129 6474805 834 - 25294431 I e calJac3.chr3 129390980 816 - 190850796 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I e manLeu1.NW_012103277v1 2728983 857 - 3013352 I e chlSab2.chr7 78962645 858 + 135778131 I e cerAty1.NW_012000798v1 4437411 857 - 9219162 I e macNem1.NW_012010911v1 34883189 858 - 40319822 I e macFas5.chr5 130891937 859 + 189454096 I e rheMac8.chr5 131373255 859 + 190429646 I a score=20413.000000 s hg38.chr9_KI270719v1_random 10814 38 + 176845 ggaggcagagcttgcagtgagccaagatcaggccactg s panTro5.chr4 135038137 38 + 194502333 ggaggcagagcttgcagtgagccgagatcgggccactg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 18670 38 - 70559 ggaggcagagcttgcagtgagccgagatcgggccactg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432063 38 - 115148730 ggaagcagagcttgcagtgagccaagaccgggccactg i nomLeu3.chr7b C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e ponAbe2.chr9 20402267 17472 + 135191526 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44003337 58 - 53741614 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e saiBol1.JH378129 6474805 834 - 25294431 I e calJac3.chr3 129390980 816 - 190850796 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I e manLeu1.NW_012103277v1 2728983 857 - 3013352 I e chlSab2.chr7 78962645 858 + 135778131 I e cerAty1.NW_012000798v1 4437411 857 - 9219162 I e macNem1.NW_012010911v1 34883189 858 - 40319822 I e macFas5.chr5 130891937 859 + 189454096 I e rheMac8.chr5 131373255 859 + 190429646 I a score=32761.000000 s hg38.chr9_KI270719v1_random 10852 38 + 176845 cactccaagctgggtgacagagaaagactccatctcaa s panTro5.chr4 135038175 38 + 194502333 cactccaacctgggcgacagagaaagactccatctcaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 18708 38 - 70559 cactccaagctgggcgacagagaaagactccatctcaa i gorGor5.CYUI01001450v1 C 0 C 0 s ponAbe2.chr9 20419739 38 + 135191526 cactccaagctgggcaacagagcaagactccatctcaa i ponAbe2.chr9 I 17472 C 0 s nomLeu3.chr7b 90432101 38 - 115148730 cactccaacctgggcgacagagcaagactccatctcaa i nomLeu3.chr7b C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44003337 58 - 53741614 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e saiBol1.JH378129 6474805 834 - 25294431 I e calJac3.chr3 129390980 816 - 190850796 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I e manLeu1.NW_012103277v1 2728983 857 - 3013352 I e chlSab2.chr7 78962645 858 + 135778131 I e cerAty1.NW_012000798v1 4437411 857 - 9219162 I e macNem1.NW_012010911v1 34883189 858 - 40319822 I e macFas5.chr5 130891937 859 + 189454096 I e rheMac8.chr5 131373255 859 + 190429646 I a score=2120.000000 s hg38.chr9_KI270719v1_random 10890 2 + 176845 aa s panTro5.chr4 135038213 2 + 194502333 ag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 18746 2 - 70559 aa i gorGor5.CYUI01001450v1 C 0 C 0 s ponAbe2.chr9 20419777 2 + 135191526 aa i ponAbe2.chr9 C 0 N 0 s nomLeu3.chr7b 90432139 2 - 115148730 aa i nomLeu3.chr7b C 0 C 0 s canFam3.chr19 44003395 2 - 53741614 aa i canFam3.chr19 I 58 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e saiBol1.JH378129 6474805 834 - 25294431 I e calJac3.chr3 129390980 816 - 190850796 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I e manLeu1.NW_012103277v1 2728983 857 - 3013352 I e chlSab2.chr7 78962645 858 + 135778131 I e cerAty1.NW_012000798v1 4437411 857 - 9219162 I e macNem1.NW_012010911v1 34883189 858 - 40319822 I e macFas5.chr5 130891937 859 + 189454096 I e rheMac8.chr5 131373255 859 + 190429646 I a score=1417.000000 s hg38.chr9_KI270719v1_random 10892 16 + 176845 aaaaaaaaaaatatat s panTro5.chr4 135038215 16 + 194502333 gaaaaaaaaaaaagaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 18748 12 - 70559 aaaaaaaaaa----aa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432141 10 - 115148730 --aaaaagaa----at i nomLeu3.chr7b C 0 C 0 s canFam3.chr19 44003397 16 - 53741614 tagttaaaacatatat i canFam3.chr19 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e saiBol1.JH378129 6474805 834 - 25294431 I e calJac3.chr3 129390980 816 - 190850796 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I e manLeu1.NW_012103277v1 2728983 857 - 3013352 I e chlSab2.chr7 78962645 858 + 135778131 I e cerAty1.NW_012000798v1 4437411 857 - 9219162 I e macNem1.NW_012010911v1 34883189 858 - 40319822 I e macFas5.chr5 130891937 859 + 189454096 I e rheMac8.chr5 131373255 859 + 190429646 I a score=3072.000000 s hg38.chr9_KI270719v1_random 10908 4 + 176845 atat s panTro5.chr4 135038231 4 + 194502333 atat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 18760 4 - 70559 atat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432151 4 - 115148730 atac i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 129391796 4 - 190850796 acaa i calJac3.chr3 I 816 C 0 s saiBol1.JH378129 6475639 4 - 25294431 ataa i saiBol1.JH378129 I 834 C 0 s canFam3.chr19 44003413 4 - 53741614 atct i canFam3.chr19 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e cebCap1.NW_016107420v1 4030452 887 - 6311556 I e colAng1.NW_012114544v1 5960269 990 + 8656713 I e manLeu1.NW_012103277v1 2728983 857 - 3013352 I e chlSab2.chr7 78962645 858 + 135778131 I e cerAty1.NW_012000798v1 4437411 857 - 9219162 I e macNem1.NW_012010911v1 34883189 858 - 40319822 I e macFas5.chr5 130891937 859 + 189454096 I e rheMac8.chr5 131373255 859 + 190429646 I a score=1753229.000000 s hg38.chr9_KI270719v1_random 10912 245 + 176845 atatat--acacattcacacacaaacatgtgcatctaggtctatttatatatctacacattcttttcaa--tttctatctaacgtagaaaaaaagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-ccttcatttctaaattctttttctaaAACAGAATCACTTAG-TTTTGTTTTAGTTAATATACTTAATATAAT----CATTTGCTTTTTA s panTro5.chr4 135038235 239 + 194502333 a--------cacattcacacacaaacatgtgcatctaggtctatttatatatctacacattcttttcaa--tttctatctaacgtagaaaaaaagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-ccctcatttctaaattctttttctaaAACGGAATCACTTAG-TTTTGTTTTAGTTAATATACTTAATATAAT----TATTTGCTTTTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 18764 238 - 70559 a--------cacattcacacacaaacatgtgcatctaggtctatttatatatctacacattcttttcaa--tttctatctaa-gtagaaaaaaagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-ccctcatttctaaattctttttctaaAACGGAATCACTTAG-TTTTGTTTTAGTTAATATACTTAATATAAT----TATTTGCTTTTTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432155 242 - 115148730 a--------cacgttcacacataaacatatgcatctatgtctatttatgtatctacacgttcttttcca--tttctatctaacctagaaaaaaagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-tcctaatttctaaACAATTTTTCTAAAATGGAATCACTTAG-TTTTGTTTTAGTTAATATACCTAATATGAT-AAGTATTTGCTTTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374114 248 + 190429646 --atatacacacattcacacacaaacatgtgcatctatgtctacttatatatctacacattattttcaa--tttttatctaacttag-aaataagtaaacttaagtatatattgatagttttgattttgattgaacaccataagtgttattctagtctccactcc-ctctcatttctaaattctttttctaaAACAGAATCACTTAG-TTTTGTTTTAGTTAATATACTTAATATGATTAAGTATTTGCTTTTTA i rheMac8.chr5 I 859 C 0 s macFas5.chr5 130892796 248 + 189454096 --atatacacacattcacacacaaacatgtgcatctatgtctacttatatatctacacattattttcaa--tttttatctaacttag-aaataagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-ttctcatttctaaattctttttctaaAACAGAATCACTTAG-TTTTGTTTTAGTTAATATACTTAATATGATTAAGTATTTGCTTTTTA i macFas5.chr5 I 859 C 0 s macNem1.NW_012010911v1 34884047 248 - 40319822 --atatacacacattcacacacaaacatgtgcatctatgtctacttatatatctacacattattttcaa--tttttatctaacttag-aaataagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-ctctcatttctaaattctttttctaaAACAGAATCACTTAG-TTTTGTCTTAGTTAATATACTTAATATGATTAAGTATTTGCTTTTTA i macNem1.NW_012010911v1 I 858 C 0 s cerAty1.NW_012000798v1 4438268 248 - 9219162 --atatacacacattcacacacaaacatgtgcatctaagtctacttatatatctacacattattttcaa--tttttatctaacttag-aaataagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-ctctcatttctaaattctttttctaaAACAGAATCACTTAG-TTTTGTTTTAGTTAATATACTTAATATGATTAAGTATTTGCTTTTTA i cerAty1.NW_012000798v1 I 857 C 0 s chlSab2.chr7 78963503 248 + 135778131 --atatacacacattcacacacaaacatgtgcacctatgtctatttatatatctacacattattttcaa--tttttatctaacttag-aaaaaagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-ctctcatttctaaattatttttctaaAACAGAATCACTTAG-TTTTGTTTTAATTAATGTACTTAATATGATTAAGTACTTGCTTTTCA i chlSab2.chr7 I 858 C 0 s manLeu1.NW_012103277v1 2729840 248 - 3013352 --atatacacacattcacacacaaacatgtgcatctatgtctacttatatatctacacattattttcaa--tttttatctaacttag-aaataagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-ctctcatttctaaattctttttctaaAACAGAATCACTTAG-TTTTGTTTTAGTTAATATACTTAATAGGATTAAGTATTTGCTTTTTA i manLeu1.NW_012103277v1 I 857 C 0 s colAng1.NW_012114544v1 5961259 247 + 8656713 --atatacacacattcacacacaaatatgtgcatctatgt-tatttatatatctacacattattttcaa--ttttcatctagcttag-aaaaaagtaaacttaagtatatattgatagttttgattctgattgaacaccataagtgttattctagtctccactcc-ctctcatttctaaattctttttcTAAAACAGAATCACTTAG-TTTTGTATTAGTTAATATACTTAATATGATTAAGTATTTGCTTTTTA i colAng1.NW_012114544v1 I 990 C 0 s calJac3.chr3 129391800 248 - 190850796 --atatacacacattcatacataaacatgtgcatctatgtttcttcatataactacatattcttttcct--tttctatctaa--caggaaaaaagtaaacttaagtgcatactggtgcttttgattctgactgaacaccataagttttattctaatctccactcctcccttatttctaaattatttttctaaAATAAAATCACTTAG-TTTTGTTTTAGGTGATATATTCAGTATGAGTAAGTGTTTGCTTTTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6475643 246 - 25294431 --atatacacatattcacacataaacatgtgcatctatgtccctttatatagctacatattcttttcca--tttctatctaatttaggaaaaaagcaaacttaggtacatactgatgtttttgattctgattgaacaccgtaagctttattctaatctccactcttcccttatttctaaattctttttctaaAATGGAATCACTTAG-TTTTGTTATAGTTGGTATATTCAGTATG----ATTGTTTCCTTTTTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4031339 249 - 6311556 --atatacacacattcacacat-aacatgtgcatctatgtctcttcatatagctacatattcttttcca--tttctaccttacttaggaaaaaagtaaacttaagtacatattgatgcttttgattctgattgaacaccgtaagttttattctaatctccactcttcccgtctttctaaattctttttcTAAAATGGAATCACTTAG-TTTTGTTATAGTTGATATATTCAGTATGATTAAGTGTTCGCTTTTTA i cebCap1.NW_016107420v1 I 887 C 0 s canFam3.chr19 44003417 219 - 53741614 ------------------------atatgt-----tatgtacacttctatatttatttgcccatttctacctttccatatatctgag-aaaaatataaacataagtataaattgatatccctgattccaacacaattccctaagatttcttttagtctgccctca-ttcttactt-taacttatctctttaagaca----cacttagcttttgttatactcaatatactcaGTATATTGATATATTTGCTTTTTA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I a score=825174.000000 s hg38.chr9_KI270719v1_random 11157 126 + 176845 t----ttttatttttttaaatttcaactttt-----agatttgaggatatatgtgagggtttgttaca-gagtatactgcatgatgctgaggtttggggtatgactgaacccatcatccaggtagtgagcatagaa s panTro5.chr4 135038474 126 + 194502333 t----ttttattttcttaaatttcaactttt-----agatttgaggatatatgtgagggtttgttaca-gagtatactgcatgatgctgaggtttggggtatgactgaacccatcatccaggtagtcagcatagaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 19002 125 - 70559 t----ttttatttttttaaatttcaactttt-----agatttgaggatatatgtgagggtttgttaca-gagtatactgcatgatgctgaggttt-gggtatgactgaacccatcatccaggtagtgagcatagaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432397 125 - 115148730 t----ttttattttttt-aatttcaactttt-----agatttgaggatatatgtgaggacttgttacg-gagtatatcgcatgatgctgaggtttggggtatgactgaacccatcacccaggtagtgagcatagaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374362 126 + 190429646 t----ttttatttt-ttaaatttcaactttt-----agattgaaggatatatgtgagggtttgttacaggagtatattgcatgatactgaggtttggggtatgaccgaacccatcacccaggtagtgaccatagaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130893044 126 + 189454096 t----ttttatttt-ttaaatttcaactttt-----agatttgaggatatatgtgagggtttgttacaggagtatattgcatgatactgaggtttggggtatgaccgaacccatcacccaggtagtgacgatagaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34884295 126 - 40319822 t----ttttatttt-ttaaatttcaactttt-----agatttgaggatatatgtgagggtttgttacaggagtatattgcatgatactgaggtttcgggtatgaccgaacccatcacccaggtagtgaccatagaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4438516 126 - 9219162 t----ttttatttt-ttaaatttcaactttt-----agatttaaggatatgtgtgagggtttgttacaggagtatattgcatgatactgaggtttggggtatgaccgaacctatcacccaggtagtgaccacagaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78963751 126 + 135778131 t----ttttacttt-ttaaatttcaactttt-----agatttgaggatatatgttagggtttgttacaggagtatattgcatgatactgaggtttggggtatgactgaaccgattacccaggtagtgagcatagaa i chlSab2.chr7 C 0 I 235 s manLeu1.NW_012103277v1 2730088 126 - 3013352 t----ttttatttt-ttaaatttcaactttt-----agatttgaggatatatgtgagggtttgttacaggagtatattgcatgatactgaggtttggggtatgaccgaacccatcacccaggtagtgaccatagaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5961506 126 + 8656713 t----ttttatttt-ttaaatttcaactttt-----agatatgaggatatatgtgagggtttgttacaggagtatattgcatgatactgaggtctggggtatgaccgaagccatcacccaggtagtgagcatagaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129392048 128 - 190850796 T-------tttttt-tttaatttccacttttattgtagatatgagggtatatgtgagggtttgttatgggggcatattgcataatgcttgggtttggagtatgactgaatccatcacccaggtagtgagtatagag i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6475889 135 - 25294431 TTTATTTGTTTGTT-TTAAAtttctgcttttattgcagatatgagggtaaatgtgagggtttgttataggggcatattgcataatgctcaggtttggggcatggctgaacccatcacccaggtagtgagcatagag i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4031588 130 - 6311556 T-----TAGTTTTT-TAAAAtttccacttttattgtagataggagggtatatgtgagggtttgttataggggtatattgcataatgctcaggtttggagcatgactgagcccatcaaccaggtagtgagcatagag i cebCap1.NW_016107420v1 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44003636 0 - 53741614 C e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I a score=-4916.000000 s hg38.chr9_KI270719v1_random 11283 2 + 176845 -cc s panTro5.chr4 135038600 2 + 194502333 -cc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 19127 2 - 70559 -cc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432522 2 - 115148730 -cc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374488 2 + 190429646 -ct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130893170 2 + 189454096 -ct i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34884421 2 - 40319822 -ct i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4438642 2 - 9219162 -ct i cerAty1.NW_012000798v1 C 0 C 0 s manLeu1.NW_012103277v1 2730214 2 - 3013352 -ct i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5961632 2 + 8656713 -ct i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129392176 2 - 190850796 cc- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6476024 2 - 25294431 ac- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4031718 2 - 6311556 ac- i cebCap1.NW_016107420v1 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44003636 0 - 53741614 C e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I e chlSab2.chr7 78963877 235 + 135778131 I a score=59540.000000 s hg38.chr9_KI270719v1_random 11285 7 + 176845 caagagg s panTro5.chr4 135038602 7 + 194502333 caagagg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 19129 7 - 70559 caagagg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432524 7 - 115148730 caagagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374490 7 + 190429646 caagagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130893172 7 + 189454096 caagagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34884423 7 - 40319822 caagagg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4438644 7 - 9219162 caagagg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78964112 7 + 135778131 CAAGAGG i chlSab2.chr7 I 235 C 0 s manLeu1.NW_012103277v1 2730216 7 - 3013352 caagagg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5961634 7 + 8656713 caagagg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129392178 7 - 190850796 caagaag i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6476026 7 - 25294431 caagagg i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4031720 7 - 6311556 caagagg i cebCap1.NW_016107420v1 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1672198 13791 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44003636 0 - 53741614 C e otoGar3.GL873702 907707 156 - 3201129 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I a score=9090.000000 s hg38.chr9_KI270719v1_random 11292 1 + 176845 t s panTro5.chr4 135038609 1 + 194502333 t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 19136 1 - 70559 t i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432531 1 - 115148730 c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374497 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130893179 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34884430 1 - 40319822 t i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4438651 1 - 9219162 t i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78964119 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2730223 1 - 3013352 t i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5961641 1 + 8656713 t i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129392185 1 - 190850796 t i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6476033 1 - 25294431 t i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4031727 1 - 6311556 t i cebCap1.NW_016107420v1 C 0 C 0 s otoGar3.GL873702 907863 1 - 3201129 T i otoGar3.GL873702 I 156 C 0 s dasNov3.JH569232 1685989 1 + 5974691 T i dasNov3.JH569232 I 13791 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44003636 0 - 53741614 C e aotNan1.NW_018507635v1 14882803 254 + 15034901 I a score=1696528.000000 s hg38.chr9_KI270719v1_random 11293 209 + 176845 attttCTATGGCACTTTACACATTCTAGAAAACTGGTTGTTAATTAGCACAagcacctataatagtgcc--tg-------atat-atttaatactc--aaaatatatgttaaattaa-AAACAAATGTATAAATTAATGG----TTGACTATCATAATAATTACTCAAAATGTAACATAATTCCAAAGGAGAAAACTTTTTT-CTAAAAAGGCTCTCTCAATTGCTC s panTro5.chr4 135038610 209 + 194502333 attttCTATGGCACTTTACACATTCTAGAAAACTGGTTGTTAATTAGCACAagcacctataatagtgcc--tg-------atat-atttagtactc--aaaatatatgttaaattaa-aaataaatGTATACATTAATGG----TTGAATATCATAATAATTACTCAAAATGTAACATAATTCCAAAGGAGAAAACTTTTTT-CTAAAAAGGCTCTCTCAATTGCTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 19137 209 - 70559 attttCTATGGCACTTTACACATTCTAGAAAACTGGTTGTTAATTAGCACAagcacctataatagtgcc--tg-------atat-atttagtactc--aaaatatatgttaaattaa-AAACAAATGTATAAATTAATGG----TTGAATATCATAATAATTACTCAAAATGTAACATAATTCCAAAGGAGAAAACTTTTTT-CTAAAAAGGCTCTCTCAATTGCTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432532 204 - 115148730 attttCTATGGCACTTTACACATTCTAGAAAACTGGTTGTTAATTAGCACAagcacctataatagtgcc--tg-------atat-atttggtactc---aaatatatgttaaattaa-AAACAAATGTATAAATTAATGG----TTGAATATCCTAATATTTACTCAAAATGTAAC--AATTCCAAAGGAGAAAACTTTTTT-CTAAAAAGGCTCTCTCAACTGC-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374498 211 + 190429646 attttCTGTGGCACTTTACACATTCTAGCCGACTGGTTGTTAATTAGCACAagcacctataatagtgcc--tg-------atat-atttagtactc-aaaaatatatgttaaattaa-AAACAAATGTATAAATTAATGA----TTGAATATCAAGATATTTACTTAAGATGTAACATAATTCCAAAAGAGAAAACTTTTTTTCTAAAAAGACTCTCTCAACTGCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130893180 211 + 189454096 attttCTGTGGCACTTTACACATTCTAGCCAACTGGTTGTTAATTAGCACAagcacctataatagtgcc--tg-------atat-atttagtactc-aaaaatatatgttaaattaa-AAACAAATGTATAAATTAATGA----TTGAATATCAAGATATTTACTTAAGATGTAACATAATTCCAAAAGAGAAAACTTTTTTTCTAAAAAGACTCTCTCAACTGCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34884431 211 - 40319822 attttCTGTGGCACTTTACACATTCTAGCCAACTGGTTGTTAATTAGCACAagcacctataatagtgcc--tg-------atat-atttagtactc-aaaaatatgtgttaaattaa-AAACAAATGTATAAATTAATGA----TTGAATATCAAGATATTTACCTAAGATGTAACATAATTCCAAAAGAGAAAACTTTTTTTCTAAAAAGACTCTCTCAACTGCTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4438652 211 - 9219162 attttCTGTGGCACTTTACACATTCTAGCCAACTGGTTGTTAATTAGCACAaacacctataatagtgcc--tg-------atat-atttagtactc-aaaaatatatgttaaattaa-AAACAAATGTATAAATTAATGA----TTGAATATCAAGATATTTACTTAAGATGTAACATAATTCCAAAAGAGAAAACTTTTTTTCTAAAAAGACTCTCTCAACTGCTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78964120 210 + 135778131 ATTTTCTATGGCGCTTTACACATTCTAGCCAACTAGTTGTTAATTAGCACAagcacctataatagtgcc--tg-------atat-atttagtactc-aaaaatatatgtcaaattaa-AAACATATGTATAAATTAATGA----TTGAATATCAAAATATTTACTTAAAATGTAATATAATTCCAAAAGAGAAAACTTTTTTG-TAAAAAGACTCTCTCAACTGCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2730224 211 - 3013352 attttATGTGGCACTTTACACATTCTAGCCAACTGGTTGTTAATTAGCACAagcacctataatagtgcc--tg-------atat-atttagtactc-aaaaatatatgttaaattaa-AAACAAATGTATAAATTAATGA----TTGAATATCAAGATATTTACTTAAGATGTAACATAATTCCAAAAGAGAAAACTTTTTTTCTAAAAAGACTCACTCAACTGCTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5961642 211 + 8656713 gttttCTATGGCACTTTACACATTCTAGCCAACTGGTTGTTAATCAGTATAagcacctataatagtgcc--tg-------atat-atttagtactt-aaaaatatatgtttaattaa-AAACAAATGTATAAATTAATGA----TTGAATATCAAAATATTTACTTAAAATGTAACATATTTCCAAAAGAGAAAACTTTTTTTCTAAAAAGACTCTCTCAACTGCTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129392186 214 - 190850796 attttCTATGGAACTTCTCACGTTCTAGCAAACTGGTTGTTAATTAGCACAagcacctgtaatagtgcctgtg-------ctat-atttagtaatcaaaaaatatatgttaaataaataaaCAAATGTATAATTTTATGG----TTGAATATCATAATGATTACTTAAAATGTAACATAATTCCAAAGGAGAAAACTTTTTT-CTAATAAGGCTCACTTGGCTACAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6476034 195 - 25294431 attttCTATAGAACTTCTCACATTCTAGCAAATTGGTTGTTAATTAGCACAAGCACCTGTAATAGTGCC--TG-------ATAT-ATTTAGTACTAAAAAAAT-----------------AAAAATGTATAAATTAATGG----TTGAATATCATAATATTTACTTAAAAACTAACATAATTCCAAAGGAGAAAACTTTTCT-CTAATAATGCTCACTTGACTACTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4031728 211 - 6311556 attttCTATGGAACTTCTCACACTCTAGCAAATTGGTTGTTAATTAGCACAagcacctgtaatagtgcc--tg-------atat-atttagtactcaaaaaatatatgttaaaaaaataaaCAAATGTATAAATTAATGG----TTGAA-ATCATAATATTTACTTAAAATGTAACATCATTCCAAAGCAGAAAACTTTTCT-CTAATAAGACTCACTTGACTACTC i cebCap1.NW_016107420v1 C 0 C 0 s otoGar3.GL873702 907864 215 - 3201129 ATTTTCTATGACACTTTTAACTTTCTAGTACACTGGTTATTAGCTAGCACAATCATCTATAACTATCCA--CACAGAAACACAC-ACAGAGTCCTCAAAAAATGTATGTCAAAT----AAACAAATGTATAAGTCAATAA----ATGACTATCATAAAATTTAATTAATATGTAGCATAATTTTGAAGGAGAAAACCTTTAT-GGGATAATGCTCACTTGATTGATC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44003636 204 - 53741614 ATTTTTTATGGCACTCTACACTTTCTGGCAGACTGGCT------------AAGAATCTATAATAATGAT--TG-------ATATAATTTAGTATATGAAGAATATATGTtaaataaattaatgaatatataaatcaataaatatataaataTTATGAAATACACCTCACATATAACTTATTTCCAAAGGAG-AATCTTTTAT-GTGACAGTGCTCCCTTGCCTGATC i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1685990 203 + 5974691 ATTTTCCAAAGTAATTTTCATTGTCTAACAGATTGGATATTCACCTGCCCCA-TACCTGTAAGAGTGTC--TG-----TCATAT-ATTTATTACTCAAATATTAATTATtaaataaataagcaaatgtataaataaatga----ataaataTCATTTAATATATTTTACATATAATACCATTCTGAAGGAGAAAGCCTTTAA-GCGTAagggtgatc---------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26289726 1559 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I a score=370716.000000 s hg38.chr9_KI270719v1_random 11502 33 + 176845 TTTCTGATTTATTATTTTCCCCAAATCTGTAGT s panTro5.chr4 135038819 33 + 194502333 TTTCTGATTTACTATTTTCCCCAAATCTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 19346 33 - 70559 TTTCTGATTTACTATTTTCCCCAAATCTGTAGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432736 31 - 115148730 --TCTGATTTACTATTTCCCCCAGATCTGTAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374709 33 + 190429646 TTTCTGATTTACTATTTCCCTCAAATCTGTAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130893391 33 + 189454096 TTTCTGATTTACTATTTCCCTCAAATCTGTAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34884642 33 - 40319822 TTTCTGATTTACTATTTCCCTCAAATCTGTAGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4438863 33 - 9219162 TTTCTGATTTACTATTTCCCTCAAATCTGTAGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78964330 33 + 135778131 TTTCTGATTTACTATTTCCCCCAAATCTGTAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2730435 33 - 3013352 TTTCAGATTTACTATTTCCCTCAAATCTGTAGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5961853 33 + 8656713 TTTCTGATTTACTATTACCCCCAAATCTGCAGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129392400 33 - 190850796 TTTCTAATGTACTATTTCCCTCAAATCTGTAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6476229 33 - 25294431 TTTCTAATTTACTATTTCCCTCAAATCTGTAGT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4031939 33 - 6311556 TTTCTAATTTACTATTTTCCTCAAATCTGTAGT i cebCap1.NW_016107420v1 C 0 C 0 s micMur3.chr14 26291285 33 - 93316391 TTTCTGATTTACTATTTTCCCAAAGTCTGTAGT i micMur3.chr14 I 1559 C 0 s otoGar3.GL873702 908079 33 - 3201129 TTTCTGATTCGCTATTTTTCCAAAGTCTGTAAT i otoGar3.GL873702 C 0 I 283 s canFam3.chr19 44003840 33 - 53741614 TTTCTGATTTACTATTTCCCCCAAATCCATAAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1686193 32 + 5974691 tctctgatttattattcaccccaaacccacgt- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I a score=841429.000000 s hg38.chr9_KI270719v1_random 11535 82 + 176845 TGC-TTCATTATTGTTTGGAATTTTGCATTAG--------------TTGTCAACAAAC-----------------------------AAA---------AAATATGGATCATACCACAGCTCTTTCATTGCTTTC s panTro5.chr4 135038852 80 + 194502333 TGC-TTCATTATTGTTTGGAATTTTGCATTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGGATCATATCACAGCTCTTTCATTGCTT-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 19379 82 - 70559 TGC-TTCATTATTGTTTGGAATTTTGCATTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGGATCATATCACAGCTCTTTCATTGCTTTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432767 82 - 115148730 TGC-TTCATTGTTGTTTGGAATTTTGCATTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGGATCATATCACAGCTCTTTCATTGCTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374742 82 + 190429646 TGC-TTCATTATTGTTTGGAATTTTGCATTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGGATCACAGCATAGCTCTTTCATTGCTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130893424 82 + 189454096 TGC-TTCATTATTGTTTGGAATTTTGCATTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGGATCACAGCATAGCTCTTTCATTGCTTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34884675 82 - 40319822 TGC-TTCATTATTGTTTGGAATTTTGCATTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGGATCACAGCATAGCTCTTTCATTGCTTTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4438896 82 - 9219162 TGC-TTCATTATTGTTTGGAATTTTGCATTAG--------------CTGTCAATAAAC-----------------------------AAA---------AAATATGGATCACAGCATAGCTCTTTCATTGCTTTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78964363 82 + 135778131 TGC-TTCATTATTGTTTGGAATTTTGCATTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGTATCATAGCACAACTCTTTCATTGTTTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2730468 82 - 3013352 TGC-TTCATTATTGTTTGGAATTTTGCGTTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGGATCACAGCATAGCTCTTTCATTGCTTTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5961886 82 + 8656713 TGT-TTCATTATTGTTTGGAATTTTGCATTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGGATCATAGCACAGCTCTTTCATTGCTTTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129392433 82 - 190850796 TGC-TTCATTATTGTTTGGAATTTTGCATTAG--------------TTGTCAACAAAC-----------------------------AAA---------AAATATAGATTATACCACAGCCCTTTCATTGCTTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6476262 82 - 25294431 TGC-TTTGTTATTGTTTGGAATTTTGCATTAG--------------TTGTCAATAAAC-----------------------------GAA---------AAATATGGATTATACCACAGCCCTTTCATTGCTTGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4031972 82 - 6311556 TGC-TTTGTTATTGTTTGGAATTTTGCATTTG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATGGATTATACCACAGCCTTTTCATTGCTTAC i cebCap1.NW_016107420v1 C 0 C 0 s micMur3.chr14 26291318 82 - 93316391 TAA-ATTATTATTATTTCAACTTTTGTATTAG--------------TTGTCAATAAAC-----------------------------AAA---------AAATATAAATCATATCATGGCTCCTTAACTGCTTTT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 908395 83 - 3201129 TAATGTCATTATTCTTTAGGTTTTTGCTTTAG--------------TTGACAATAAAC-----------------------------AAC---------AACAAAAAATTATACCAAAGTTCCTTAACTGCTTTC i otoGar3.GL873702 I 283 C 0 s canFam3.chr19 44003873 91 - 53741614 TAA-ATCATTACTGCTTAGAATTTTGCTTTAG--------------TTATCAATAAAC-----------------------------AACAACAACAATAAATATGGATCATATCATAGTCTTTTAACTGCTTTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1686225 125 + 5974691 tac-cacattattgtttggaattatgctttagaaaatacataaaatctctctACAAGCAATAAAATAACCCTACATTTCCTGATTTAAAA---------AAATATGGGTCATTCCAAAGCTCTTTAACTGCTTTT i dasNov3.JH569232 C 0 I 1 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e aotNan1.NW_018507635v1 14882803 254 + 15034901 I a score=924779.000000 s hg38.chr9_KI270719v1_random 11617 88 + 176845 ATTTCTTGAGATATATGAATGTATGTGATATCTTTG-ATGTCCTGTATTTTATCTTTATTGC--TTTTTGTTACT----TA----AGAACATCTAGAAA s panTro5.chr4 135038932 81 + 194502333 -------GAGATATATGAATGTATGTGATATCTTTG-ATGTCCTGTATTTTATCTTTATTGC--TTTTTGTTACT----TA----AGAACATCTAGAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 19461 88 - 70559 ATTTCTTGAGATATATGAATGTATGTGATATCTTTG-ATGTCCTGTATTTTATCTTTATTGC--TTTTTGTTACT----TA----AGAACATCTAGAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432849 88 - 115148730 ATTTCTTGAGATATGTGAATGTATGTGATATCTTTG-ATGTCCTATATTTTATCTTTATGGC--TTTTTGTTACT----TA----AGAACATCTGGAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374824 88 + 190429646 ATTTCTTGAGATATATGAATGTATGTGATATCTTTG-ATGTCCTATATTTTATCTTTATTGC--TTTTTGTTACT----TA----AGAACATCTACAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130893506 88 + 189454096 ATTTCTTGAGATATATGAATGTATGTGATATCTTTG-ATGTCCTATATTTTATCTTTATTGC--TTTTTGTTACT----TA----AGAACATCTACAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34884757 88 - 40319822 ATTTCTTGAGATATATGAATGTATGTGATATCTTTG-ATGTCCTATATTTTATCTTTATTGC--TTTTTGTTACT----TA----AGAACATCTACAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4438978 88 - 9219162 ATTTCTTGAGATATATGAATGTATGTGATATCTTTG-ATGTCCTATATTTTATCTTTATTGC--TTTTTGTTACT----TA----ACAACATCTACAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78964445 88 + 135778131 ATTTCTTGAGATATATGAATGTATGTGATATCTTTG-ATGTCCTATATTTTATCTTTATTGC--TTTTTGTCACT----TA----AGAACATCTAGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2730550 88 - 3013352 ATTTCTTGAGATATATGAATGTATGTGATATCTTTG-ATGTCCTATATTTTATCTTTATTGC--TTTTTGTTACT----TA----AGAACATCTACAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5961968 88 + 8656713 ATTTCTTGAGATATATGAATGTATGTGATATCTTTG-ATGTCCTATATTTTATCTTTATTGC--TTTTTGTTACT----TA----AGAACATCTAGAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129392515 87 - 190850796 ATTTCTTGAGATATATGAATATATTTTATATCTTTG-ATGCCCTGTATTTTCTATTTATTG---CTTTTGTTGCT----TA----AGAACTTCTAGAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6476344 88 - 25294431 ATTTCTTGAGATATATGAATATATTTTATATCTTTG-ATGCCCTGTATTTTATATTTATTGT--TTTTTGTTACT----TG----AGAACGTCTAGAAA i saiBol1.JH378129 C 0 M 1754 s cebCap1.NW_016107420v1 4032054 87 - 6311556 ATTTCTTGAGATATATGAATATATTTTATATCTTTG-ATGCCCTGTATTTTATATTTATTG---CTTTTGTTACT----TA----AGAACTTTTGGAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14883057 87 + 15034901 ATTTCTTGAGATATATGAATATATTTTATATCTTTG-ATGCCCTGTAATTTATATTTATTG---CTTTCGTTACT----AA----AGAACTTCTAGAAA i aotNan1.NW_018507635v1 I 254 C 0 s micMur3.chr14 26291400 90 - 93316391 ATTTACTGAGAGATATGAA--TATTCTATCTCCTTG-TTGCCATGTATTTCATCTTTATTGC-TTTTTTGGTACT----TAAGT-AAAGCTTCTGGAAA i micMur3.chr14 C 0 I 6 s otoGar3.GL873702 908478 84 - 3201129 ATTTGTTGAGAG----------ATTCTCTTTCCTTG-CTGCTATGTATTTTACCTTTGTTTTGTTTTTTGATACT----TAAGTAAAAACTTCTGGAAA i otoGar3.GL873702 C 0 I 4 s canFam3.chr19 44003964 93 - 53741614 GTTTCTTGAGAAATATGAATGGATTTGAGATCTTTACCTGCCACATATTCTATCTTTATTGTT-TTTTTGTTATT-TGGTA----AGACCATCTAGGAA i canFam3.chr19 C 0 I 6 s dasNov3.JH569232 1686351 91 + 5974691 AGCTCTTGAAAAATAGAAATAGATTTGATATCCTTGTTTGCCATATATTTTATCTTATTT----TTTTTTTTACTAAGATA----AGAACTCCAAGAAA i dasNov3.JH569232 I 1 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I a score=7965671.000000 s hg38.chr9_KI270719v1_random 11705 692 + 176845 AGAAG----ATAAATATTAATCATGTCAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAAAACTTCCTTCTTCATCAAAACACAGTA--------------TT-TTTTAAAAA-----------------------------------------------ATAGAGTGCTTCAT-TTTTATTTCACAGAA--AATAATCA---AATGATAGCCAGAATATTATGAACTAGAGTCACATAGGCTATTCTAATAATACTTTTTGTG-AAAGAAGTATTGAGGAGGTCTTAGGACCAAAGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCATAAAAAGGATATGTATTTGTTCAATTT-CACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATGCTCAAAGAGATGAGACTTGCCAGTCGAATAACTTAAGATCTCATTAAATTTACCAGCAACAT-AAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTGAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGATTTCTCCATTATCAAGAGAGTAGTCAGTTCTTAACTTTAGAATGATTGTATA s panTro5.chr4 135039013 691 + 194502333 AGAAG----ATAAATATTAATCATGTCAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAAACCTTCCTTCTTCATCAAAACACAGTA--------------TT-TTTTAAAAA-----------------------------------------------ATAGAGTGCTTCAT-TTTTATTTCACAGAA--AACAATCA---AATGATAGCCAGAATATTATGAACTAGAGTCACATAGGATATTCTAATAATACTACTTGTG-AAAGAAGTATTGAGGAGGTCTTAGGACAAAAGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCATAAAAAGGATATGTATTTGTTCAATTTTCACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAAATGCTCA--GAGATGAGACTTGCCAGTCGAATAATTTAAGATCTCATTAAATTTACCAGCAACAT-GAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTAAAAGACAAT-AAAAA---TTTTGTATTTGTGTGTTGAAAGATTTCTCCATTATCAAGAGAGTAGTCAGTTCTTAACTTTAGAATGATTGCATA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 19549 690 - 70559 A-AAG----ATAAATATTAATCATGTCAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAAAACTTCCTTCTTCATCAAAACACAGTA--------------TT-TTTTAAAAA-----------------------------------------------ATAGAGTGCTTCAT-TTTTATTTCACAGAA--AATAATCA---AATGATAGCCAGAATATTATGAACTAGAGTCACATAGGATATTCTAATAATACT-CTTGTG-AAAGAAGTATTGAGGAGGTCTTAGGAC-AAAGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCATAAAAAGGATATGTATTTGTTCAATTTTCACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATGCTCAAAGAGATGAGACTTGCCAGTCGAATAACTTAAGATCTCATTAAATTTACCAGCAACAT-AAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTAAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGATTTCTCCATTATCAAGAGAGTAGTCAGTTCTTAACTTTAGAATGATTGCATA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90432937 691 - 115148730 AGAAG----ATAAATATTAATCATGTCAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGACAACCACTCAAAAACTTCCTTCTTCATCAAAACACAGTA--------------TT-TTTTAAAAA-----------------------------------------------ATAGAGTGCTTTAT-TTTTATTTCACAGAA--GATAATCAAATAATGATATCCAGAATATTATAAACTAGAGTCACATAGGATATTCTAATAATACTATTTGTG-AAAAAAGTATTGAGGAGGTCTTAGGACCAAAGAGTATTTGTTTAATAGTGTCAGAATTCATTTTAACACGATAAAAAGGATATGTATTTGTTCAATTTTCACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCGTTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATGCTCAAAGAGATGAGACTTGCCAACCGAATAACTTAAGATCTCATTAAATTTACCAGCAACAT-AAAAGCTATTTCTGTCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTAAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGCTTTCTCCATTATCAAGAGAGTAGTCAGTT-----CTTTAGAATGATTGCATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131374912 698 + 190429646 AGAAG----ATAAATATTAATTATGCTAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAATACTTCCTTCTTCATCAAAACACAGCA--------------TTAAAAAAAAAA----------------------------------------------AATAGAGTCCTTCAT-TTTTATTTCACAGAA--AATAATCAAATAATGATAGCCAGAATACTATGAACTAGAATCACATAGGATATTCTAATAATACTACTTGTG-AAAAAAGTattgaggaggtcttatgaccaaagaatatttgtttaatagtgtcagaattcattttaacaccacaaaaaggatatgtatttgttcaattttcactcactgcacAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATACTCAAAGAGATGAGACTTGCCAGTTGAATAACTTAAGATCTCATTAAATTTACCAGCAACAA-AAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTAAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGGTTTCTCCATTATCAAGAAAGTAGTTAGTTCTTAACTTTAGAATTATTGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130893594 697 + 189454096 AGAAG----ATAAATATTAATTATGCTAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAATACTTCCTTCTTCATCAAAACACAGCA--------------TT-AAAAAAAAA----------------------------------------------AATAGAGTCCTTCAT-TTTTATTTCACAGAA--AATAATCAAATAATGATAGCCAGAATACTATGAACTAGAATCACATAGGATATTCTAATAATACTACTTGTG-AAAAAAGTATTGAGGAGGTCTTATGACCAAAGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCACAAAAAGGATATGTATTTGTTCAATTTTCACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATACTCAAAGAGATGAGACTTGCCAGTTGAATAACTTAAGATCTCATTAAATTTACCAGCAACAA-AAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTAAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGGTTTCTCCATTATCAAGAAAGTAGTTAGTTCTTAACTTTAGAATTATTGCATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34884845 697 - 40319822 AGAAG----ATAAATATTAATTATGCTAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAATACTTCCTTCTTCATCAAAACACAGCA--------------TT-AAAAAAAAA----------------------------------------------AATAGAGTCCTTCAT-TTTTATTTCACAGAA--AATAATCAAATAATGATATCCAGAATACTATGAACTAGAATCACATAGGATATTCTAATAATAGTACTTGTG-AAAAAAGTattgaggaggtcttatgaccaaagaatatttgtttaatagtgtcagaattcattttaacaccacaaaaaggatatgtatttgttcaattttcactcactgcacAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATACTCAAAGAGATGAGACTTGCCAGTTGAATAACTTAAGATCTCATTAAATTTACCAGCAACAA-AAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTAAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGGTTTCTCCATTATCAAGAAAGTAGTTAGTTCTTAACTTTAGAATTATTGCATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4439066 694 - 9219162 AGAAG----ATAAATATTAATTATGCTAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAATACTTCCTTCTTCATCAAAACACAGCA--------------TT-AAAAAAAAA-------------------------------------------------AGAGTCCTTCAT-TTTTATTTCACAGAA--AATAATCAAATAATGATAGCCAGAATATTATGAACTAGAATCACATAGGATATTCTAATAATACTACTTGTG-AAAAAAGTATTGAGGAGGTCTTATGACCGAAGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCACAAAAAGGATATGTATTTGTTCAATTTTCACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATACTCAAAGAGATGAGACTTGCCAGTTGAATAACTTAAGATCTCATTAAATTTACCAGCAACAA-AAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTAAAAGACAAC-AAAAA---TTTTGTTTTTGTGTGTTGAAAGGTTTCTCCATTATCAAGAAAGTAGTTAGTTCTTAACTTTAGAATTATTGCATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78964533 705 + 135778131 AGAAG----ATAAATATTAATTATGCTAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAATACTTCCTTCTTCATCAAAACACAGCATTTTTTTTCTCTTTTT-AAAAAA----------------------------------------------------AGAGTTCTTCAT-TTTTATTTCACAGAA--AATAATCAAATAATGATAGCCAGAATATTATGAACTAGAATCACATAGGCTATTCTAATAATACTACTTGTG-AAAAAAGTATTGAGGAGGTCTTATGACCAAAGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCACAAAAAGGATATGTATTTGTTCAATTTTCACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAAGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATACTCAAAGAGATGAGACTTGCCAGTTGAATAACTTAAGATCTCATTAAATTTACCAGCAACAA-AAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTAAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGATTTCTCCATTATCAAGAAAGTAGTTAGTTCTTAACTTTAGAATTATTGCATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2730638 696 - 3013352 AGAAG----ATAAATGTTAATTATGCTAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAATATTTCCTTCTTCATCAAAACACAGCA--------------TT-AAAAAAAAA-----------------------------------------------ATAGAGTCCTTAAT-TTTTATTTCACAGAA--AATAATCAAATAATGATAGCCAGAATATTATGAAGTAGAATCACATAGGATATTCTAATAATACTACTTGTG-AAAAAAGTATTGAGGAGGTCTTATGACTAAAGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCACAAAAAGGATATGTATTTGTTCAATTTTCACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATACTCAAAGAGATGAGACTTGCCAGTTGAATAACTTAAGATCTCATTAAATTTACCAGCAACAA-AAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGGCCTATTTAAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGGTTTCTCCATTATCAAGAAAGTAGTTAGTTCTTAACTTTAGAATTATTGCATA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5962056 747 + 8656713 AGAAGATAAATAAATATTAATTATGCTAGAAATTATCAAAGGTTGATTACAATAAAAATTTCTCTAATGTGATAACCACTCAAATATTTCCTTCTTCATCAAAACATAGCA--------------TT-TAAAAAAAATAGAGTCCTTCATTTTCCTTCTTCATCAAAACATAACATTTAAAAAAATAGAGTCCTTCAT-TTTTATTTCACAGAA--AATAATCAAATAATGATAGCCAGAATATTACGAACTAGAATCACATAGGATATTCTAATACTACTACTTGTG-AAAAAAGTattgaggaggtcttatgaccaaagaatatttgtttaatagtgtcagaattcattttaacaccacaaaaaggatatgtatttgttcaattttcactcactgcacAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATACTCAAAGAGATGAGACTTGCCAGTTGAATAACTTAAGATCTCATTAAATTTACCAGCAACAA-AAAAGCTATTTCTGCCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTCAGGACCTATTTAAAATACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGGTTTCTCCATTATCAAGAGAGTAGTTAGTTCTTAACTTTAGAATTATTGCATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129392602 693 - 190850796 --AAG----ATAAATACTAATTATGTTAGAAATTGTCAAAGGATGATTGCACTACAAAATTCTCTAATATAGTAACCACTCAAAAA-TTCCTTCTTCATCATAGTACAGTG--------------GT-TTTTTAAAA-----------------------------------------------ATAGAGTGGCTTAT-TTTTGTTTCACAGAA--AATAATCAAATTATGATAGCCAGAATATTATGGACTAGAGTCACATAGGATATTCTAATAATACTACTTGTG-ATGAAAGTATTGAGGAGGTCTTAAGACCACAGAATATTTGTTTAATAGTGTCGGAATTCATTTTAACACCATGAAAAGGGTATGTATTTGTTCAATTTTCACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTTAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGCTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATGCTCAAAGGCATGAGACTTGCCAGTTGAATAACTTAAGGTCTCATTAAATTTACCGGCAACAA-AAAAGCTGTTTCTGTCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTGAGAACCTATTTAAAGGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGTTTTCTCCATTATCAAGAGAGTAGTCAGCTCTTAACTTTAGAATTATAGCATA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4032141 692 - 6311556 AAAAG----ATAAATACTAATTATGTTAGAAATTGTCAAAGGATGATTACAATACAAATTTCTCTAATATAATAACCACTCGAAAA-TTCCTTCTTCATCATAGTACAGTG--------------CG-TTTTTAAAA-----------------------------------------------ATAGAGTGACTTAT-TTTTGTTTCACGGAA--AATAATCAAATTATGATAGCCTGAATATTATGGACTAGAGTCACATAGGGTATTCTAATAATACTACTTGTG-ATAAAAGTATTGAGGAGGTCTTAAGACCACAGGATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCATGAAAAGGGTATGTATTTGTTCAATTTTCACTCACTGCACAAATAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATGCTCAAAGAGATGAGACGTGCCAGTCGAATAACTTAAGATCTCATTAAATTTACCAGCAACAG-AAAAGCTATTTCTGTCTCTTAAGTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTGAGAACCTATTTAAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGTTTTCTCCATTATCAAGAGAGTAGTCAG---TAAACTTTAGAATTATAGCATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14883144 695 + 15034901 AAAAG----ATAAATACTAATTATGTTAGAAATTGTCAAAGGATGATTACAATACAAATTTATCTAATACAGTAACCACTCAAAAA-TTCCTTCTTTATCATAGTACAGTG--------------GT-TTTTTAAAA-----------------------------------------------ATAGAGTGACTTAT-TTTTGTTTCACAGAA--AATAATCAAATTACGATAGCCAGAATATTATGGACTAGAGTCACATAGGATATTCTAATAATACTACTTGTG-ATAAAAGTATTGAGGAGGTCTTAAGACCACAGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCATGAAAAGGGTATGTATTTGTTCAATTTTCACTCACTGCACAAAGAATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTTAGTTTTGGTGTAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATGCTGAAAGAGATGAGACTTGCCAGTTGAATAACTTAAGATCTCATTAAATTTGCCAGTAACAA-AAAAGCTATTTCTGTCTCTTAACTTTTTGATGTGTTGCCTTTTTCTAATCCTCTTCTGAGAACCTATTTAAAAGACAAT-AAAAA---TTTTGTTTTTGTGTGTTGAAAGTTTTCTCCATTATCAAGAGAGTAGTCAGTTCTTAACTTTAGAATTATAGTGTA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26291496 696 - 93316391 AGAAA----ATAAATATTAATTATGTTAGAAATTATCAAAAGATGATTATAATATAAATATCTCTGATATGGAAACCACT-CAAAAATTTCTTCCTCATCCTAATACAGTG--------------TG-TTTTTAA-------------------------------------------------ATAGAGAGCCTCTT-TTTTATTTCATAGAAATAATAATTATATTGCAGTAGTCAGAATATTGTGGTCTAGAATTGCATAGGATATTCTAATAATACCGCTTGTGCAAAAAAGTATTGAGGATGTCTTAGGCCCAAAGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCATGAAAAGGGTATGTATTTGTTCAATTTTCACTCACTGCACAAAGCATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTTAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTATTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTCACTGAGATGCTCAAAGAAATGAGCCATGCCAGTTGAATAACTTAAGATTTCATTAAATTTACCAGCAACAA-GAAAGCTATTTCTGTCTCTTAACTTTTTGATGTGTTGTCTTTTTCTATTCCTCTTCTTAGGATCTACTTAAAATACAAT-CAAAA---TTGTATTTTTGTGTGTTAAATGATTTTTCCATTATCAAGAGAATAGTCAGTTCTTAACTTTAGAATTATTGCATA i micMur3.chr14 I 6 I 204 s otoGar3.GL873702 908566 661 - 3201129 AAAAA----AT-----TTAGTTATGTTAGAAATTATCACAGGATGTTTACAATATTCATTTCTCTAATATGATAAACACTGAAAAAATTCCTTCATCATCATAGTGCAGTG--------------TT-TTTT---------------------------------------------------------AAGCTTAAT-TTTTATGCCACAGAA--AATAATTATATTACAGTAGTCAGAATATTATGGACTGGAAACACATAGGATATTCTAATAATACTGCTTGTG--AAAAAGTATTGAAAGGGTCTCAGGACCAAGGAATATTTGTTTAATAGTGTCAGAATTCATTTTAACACCATGAAAAGGGTATGTATTTGTTCAATTTTCACTCGCTGCACAAAGCATTAGATAAAAGAAGATTTTCAGTAATAGCA-TTCATTTTGAGTCTTACCAATCCTTTTAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTATTCTGTTGTGTTGAATTTTGATGATTTCTGACAGTCTTTACTGAGATGCTCAAAGAAATGAGACTTACCAGTCGAATAACTTAAGATTTCATTAAATTTGCAAGCAACAA-AAAAGCTATTTCTGTCTCTTTACTTTTTGATGTGTTGTCTTTGTCTAATCCTCTTCTTAGGACCTATTTAAAATGCAAT-ACAAA---TTTTATTTTTGT-------------------TTATTAAAAGAAGAAATAGTTCTTAAGTTTAGAATTAGTTTATA i otoGar3.GL873702 I 4 C 0 s canFam3.chr19 44004063 683 - 53741614 AGAAG----AGAGGTATTAATTACATTACAAATTACCataaaataattaaaatataaatttatttaaGATAGTAACCACCCAGAGAATTCTCTCTTCATCATAATATGTTT--------------TT---------A-------------------------------------------------AGAGTGTTTCAT-TTTTATTCCATACAA--AATAATTTTATTATGGTAATAAGAATATTATGGGATAGAATCACATAAAATATTCTAATAATACTATTTGTG--GAAAAGTATTGAGGAGGTTTTAGGACCAAAGAATATTTGTTTAATGGTGTCAGAATTCATTTTAACACCATGAAAAGAGTATGTATTTGTTCAATTTTCACTCACTGCACAAAGCATTAGATAAAAGAAGATTTTCAGTAATAGCA-----TTTCAAGACTTACCAATCCTTTTAGTTTTGGTATAACAAAAAGGC---TATTAGCTTTTACTCTGTTGTGTTGAATTTTGATGATTTTTGACAGTCTTCACTGAGACATTCAAAGAAATGAGACTTGCCAGTCGAATAACATAAGATTTCATTAAATGTACCAGCAACAAGAAAAGCTATTTCTGTCTCTTAACTTTTTGATGTGTTGTCTTTTACTAATCCTCTTCCCAGGACCTATATAAAAAGCAATAAAAAA---ATTTATTTTTGTGTGTTCAAAGCTTTCTCCATAATCAAGATAATAGTGAAGTCTTAACTTTAAAATTATTGCATT i canFam3.chr19 I 6 C 0 s dasNov3.JH569232 1686442 693 + 5974691 ---GG----GGGAATAATTTGCATACTAGTAATTACCTAATAATGATTGCCATATAAATTCCTCTAG-ATGATAACAATTTAAAAA-TTCTTTCTTCATAATAATAATATA--------------TT-TAGTTA--------------------------------------------------ATAGACTGTTTTACATTATATTCTATATGA--AATAATTATACTAGGATAGTCAGAATATTATAATATA-AATCACATAAGAAATTCTGGTAATACCTCTTGCA-AAAAACATATTGAAGAGGCCTTAGGACCAAAGAAGAATTGTTTAATAGTGTCAGAATTCATTTCATCACCATGAAAAGGGTAAGAATTTGTTCAATTTTCACTCACTGCACAAAGCATTAGATAAAAAATGATGTTCAATAATAGCATTTCATTTTGAGTCTTACCAATCCTTTCAGTTTTGGTATAACAGAAAGGCTATTATTAGCTTTTAAACTGTTGTGCTGAATTTTGATGATTTCTGACAGTCTTTACTGAGAAGCTCAAAGGAATAAGAATTGCCAATCAAATAACATAAGATTTCATTTAATTTATCAGCAACAA-AAAAGCTGTTTCTTTCTCTTAACTTTTTGATGTGTTGTATTTTTCTAAACCTCTTCTCACAACTTATTTAGAAGGCACt-aaaaatattttattttttttGTGCTCAAAGATTTCTCCTTAATCAAAAAA--AGTTCACTTTTAACTTTAGAATAATCACATT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e saiBol1.JH378129 6476432 1754 - 25294431 M a score=1143837.000000 s hg38.chr9_KI270719v1_random 12397 140 + 176845 TATAGATATGAAAAATAAGGAAACAATTATTAAGAAAACTAATCAAATTTTT-TACTAACATTTAGTAATT-TTAACAAAATTATTGTACATTGTATTTTGCAGCATTTATGCAGAGGATATACTAACCTGTTTAAATTTTT s panTro5.chr4 135039704 140 + 194502333 TATAGATATGAAAAATAAGGAAACAATTATTAGGAAAACTAATAAAATTTTT-TACTAATATTTAGTAATT-ATAACAAAATTATTGTGCATTGTATTTTGTAGCATTTATGCAGAGGATATACTAACCTGTTTAAATTTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 20239 140 - 70559 TATAGATATGAAAAATAAGGAAACAATTATTAAGAAAACTAATCAAATTTTT-TACTAACATTTAGTAATT-TTAACAAAATTATTGTGCATTGTATTTTGTAGCATTTATGCAGAGGATATACTAACCTGTTTAAATTTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90433628 136 - 115148730 TATAGATATGAAAAATAAG----CAATTATTAAGAAAACTAATCAAAGTTTT-TACTAACATTTAGTAATT-ATAACAAAATTATTGTGCATTGTATTTTGTAGCATTTATGCAAAGGATATACTAACTTGTTTTAATTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131375610 139 + 190429646 TATAGATATGAAAAATAAGCAAACAATCATTAAGAAAACTAATC-AATTTTT-TACTAACATGTAGTAATT-TTAACAAAATTATTGTGCATTGCATTTTGTAGCACTTATGCAGAGGATATACTAACCTGTTTAAATTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130894291 139 + 189454096 TATAGATATGAAAAATAAGCAAACAATCATTAAGAAAACTAATC-AATTTTT-TACTAACATGTAGTAATT-TTAACAAAATTATTGTGCATTGCATTTTGTAGCACTTATGCAGAGGATATACTAACCTGTTTAAATTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34885542 139 - 40319822 TATAGATATGAAAAATAAGCAAACAATCATTAAGAAAACTAATC-AATTTTT-TACTAACATGTAGTAATT-TTAACAAAATTATTGTGCATTGCATTTTGTAGCACTTATGCAGAGGATATACTAACCTGTTTAAATTTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4439760 139 - 9219162 TATAGATATGAAAAATAAGCAAACAATCGTTAAGAAAACTAATC-AATTTTT-TACTAACATGTAGTAATT-TTAACAAAATTATTGTGCATTGTATTTTGTAGCACTTATGCAGAGGATATACTAACCTGTTTAAATTTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78965238 139 + 135778131 TATAGATATGAAAAATAAGCAAACAATCATTAAGAAAACTAATC-AATTTTT-TACTAACATGTAGTAATT-TTAACAAAATTATTGTGCATTGTATTTTGTAGCACTTATGCAGAGGATATACTAACCTGTTTAAATTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2731334 139 - 3013352 TATAGATATGAAAAATAAGCAAACAATCATTAAGAAAACTAATC-AATTTTT-TACTAACATGTAGTAATT-TTAACAAAATTATTGTGCATTGTATTTTGTAGCACTTATGCAGAGGATATACTAACCTGTTTAAATTTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5962803 135 + 8656713 TATAGATAGGAAAAATAAG----CAGTCATTAAGAAAACTAATC-AATCTTT-TACTAACATGTAATAATT-ATAACAAAATTATTGTGCATTGTATTTTGTAGCACTTATGCAGAGGATATGCTAACAGGTTTAAATTTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129393295 138 - 190850796 AATAGGTATGAAAAATAAGCACACAATTATTAAGAAAATTAATCAAATTTTTATACTAACATATAGTAACT-ATAACAACATTATTGTGTATTGTGTTTTGTAGCATTT-TGCAGAAA--AAAGTAACCTGTTCAAATTTTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4032833 139 - 6311556 AATAGGTATGAAAAATAAACAAACAATTATTAAGAAAATTAATCAAATGTTTGTACAAACATATAGTAACT-ATAACAAAATTATTGTGTATTGTATTTTGGAGCATTT-TGCAGAAA-TATAGCAACGTGTTTAAATTTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14883839 139 + 15034901 AATAGGTATGAAAAATAAGCACACAATTATTAAGAAAATTAATCAAATGTTTATACTAACATATAGTAACT-ATAACAAAATTATTGTGTATTGTATTTTGTAGCATTT-TGCAGAAA-TATAGTAACCTGTTTAAATTTTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 909227 141 - 3201129 TATATACAT-CCAAATAAGGACATGATTATTAAAACAATTTAGCAAATTTTTATATTCATGTGTAGCAATTATTAATGAAAatattatacatggtatttcatagcatttatgaagaagatatattatcttatttaaattatt i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44004746 138 - 53741614 TATAAACAT-CAAAACAAGCACACAATTATTAAAGAAATCAATC-AAAATTT-TGTTAGCATATAGCAATA-GTAACAAAAATATTGTGCTTGTAATTCAGTAACACTTATATAGAAGATATAATATCCTCTTTAAATTTTG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1687135 138 + 5974691 AATACATAT-CAAATTAGGCTCAC-GTTATTAGGTAAATCAATTAAATATTTGCATTAATGTAGAGTAACA-GTAACAGAA-TACTATGCAAGATATTTTATAGCATTTTTAAAGAAGACATATTACTGTAATTTTATTTCT i dasNov3.JH569232 C 0 I 860 e micMur3.chr14 26292192 204 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e saiBol1.JH378129 6476432 1754 - 25294431 M a score=524414.000000 s hg38.chr9_KI270719v1_random 12537 64 + 176845 AGACACAAAT-A-GTAGAAAATAGAACATCATCATTTTCAGGAGCAAGGAAGTAACCTGTGAAAAA s panTro5.chr4 135039844 64 + 194502333 AGACAGAAAT-A-GTAGAAAATCAAACATTGTCATTTTCAGGAGCAAGGAAGTAACCTGTGAAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 20379 64 - 70559 AGACAGAAAT-A-GTAGAAAATAGAACATCGTCATTTTCAGGAGCAAGGAAGTAACCTGTGAAAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90433764 64 - 115148730 AGACAGAAAT-A-GCAGAAAATAGAACATTGTCATTTTCAGGAGCAAGGAAGTAACCTGTGAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131375749 64 + 190429646 AGACAGAAAT-A-GTAGAAAATAGAATATTGTCATTTTCAGGAGCAAGGATGTAACCTGTGAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130894430 64 + 189454096 AGACAGAAAT-A-GTAGAAAATAGAATATTGTCATTTTCAGGAGCAAGGATGTAACCTGTGAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34885681 64 - 40319822 AGACAGAAAT-A-GTAGAAAATAGAATATTGTCATTTTCAGGAGCAAGGATGTAACCTGTGAAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4439899 64 - 9219162 AGACAGAAAT-A-GTAGAAAATAGAATATTGTCATTTTCAGGAGCAAGGATGTAACCTGTGAAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78965377 64 + 135778131 AGACAGAAAT-A-GTAGAAAATAGAATATTGTCATTTTCAGGAGCAAGGATGTAACCTGTGAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2731473 64 - 3013352 AGACAGAAAT-A-GTAGAAAATAGAATATTGTCATTTTCAGGAGCAAGGATGTAATCTGTGAAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5962938 64 + 8656713 AGGCAGAAAT-A-GTAGAAAATAGAATATTGTCATTTTCAGGAGCAAGGATGTAACCTGTGAAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129393433 64 - 190850796 AGACGGAAAT-A-GTGAGAAACAGAATTTTGTCATTTTCAGGAACAAGGAAATAACTTGTGAAAAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4032972 64 - 6311556 AGACAGAAAT-A-GTGAGAAACAGAATTTTGTCATTTTCAGGAGCAAGGAAATAACTTGTGAAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14883978 64 + 15034901 AGACAGAAAT-A-GTGAGAAACAGAATTTTGTCATTTTCAGGAGCAAGGAAATAACTTGTGAAAAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 909368 61 - 3201129 acatgaaagtaa-gcaggaaaggtaatatt---attttcatgaatgaggaaaaggtctgtggaaa- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44004884 63 - 53741614 TCACAAAAGT-ATGTGGGAAA--AAATAATACCACTTTCATAGGTAAGGAAATGGCCTGTGAAAAA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26292192 204 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1687273 860 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e saiBol1.JH378129 6476432 1754 - 25294431 M a score=3837323.000000 s hg38.chr9_KI270719v1_random 12601 425 + 176845 GTGAATGCCTTTCTTCAAATAATATGCTAATGAAAGGCTGAGATATTAATG--TCCAAatattataaaacgttcattttaatataatg------ttttactttatatttatattgtattgtatAACAAAGAAATGTGAGTCTTCTTACACCTGAGAACTTGAACTGGCAATCTACA-TATTGTTGTTGAAACAATTTTAAATTAAAAATACAATGAGAG-GGAAAAATGATTC-TGTTGCCTCAATTTTAAA---AGGAATATTTTGAAGAAATAATTTTCCATATAATAGCTTGTTATG-ATCTTGCCTTTTAGCCTCCCTGGATAAAGAAAAGCATACTTATAATAATTGAAGGAAGACAATTTTCCTTGTTTTCTGCAAATTAGAAATATATTAGGCTATTAAATACATAATTCAAAATATACAGAATAAAGGTA-TT s panTro5.chr4 135039908 425 + 194502333 ATGAATGCCTTTCTTCAAATAATATGCTAATGAAAGGCTGAGatattaatg--tctaaatattataaaactttcattttaatataatg------ttttactttatatttatattgtattgtatAACAAAGAAATGTGAGTCTTGCTACACCTGAGACCTTGAACTGGCAATCTACA-TATTGTTGTTGAAACAATTTTAAATTAAACATACAATGAGAG-GGAAAAATGATTC-TGTTGCCTCAATTTTAAA---AGGAATATTTTGAAGAAATAATTTTCCATATAATAGCTTGTTATG-ATCTTGCCTTTTAGCCTCCCTGGATAAAGAAATGCATACTTATAATCATTGAAGGAAGACAATTTTCCTTGTTTTCTGCAAATTAGAAATATATTAGGCTATTAAATACATAATTCAAAATATACAGAATAAAGGTA-TT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 20443 425 - 70559 GTGAATGCCTTTCTTCAAATAATATGCTAATGAAAGGCTGAGatattaatg--tctaaatattataaaactttcattttaatataatg------ttttactttatatttatattgtattgtatAACAAAGAAATGTGAGTCTTGTTACACCTGAGAACTTGAACTGGCAATCTACA-TATTGTTGTTGAAACAATTTTAAATTAAACATACAATGAGAG-GGAAAAATGATTC-TGTTGCCTCAATTTTAAA---AGGAATATTTTGAAGAAATAATTTTCCATATAATAGCTTGTTATG-ATCTTGCCTTTTAGCCTCCCTGGATAAAGAAATGCATACTTATAATAATTGAAGGAAGACAATTTTCCTTGTTTTCTGCAAATTAGAAATATATTAGGCTATTAAATACATAATTCAAAATATACAGAATAAAGGTA-TT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90433828 425 - 115148730 GTGAATGCCTTTGTTCAAATAATATGCTAATGAAAGGCTGAGATATTAATG--TCTAAATATTATAAAACTTTCATTTTAATATAGTG------TTTTACTTTATATTTATATTGTATTGTCTAACAAAGAAATGTGAGTCTTGTTACACCTGAGAACTTGAACTGGCAATCTACA-CATTGTTGTTGAAACAATTTTAAATTAAACATACAATGAGAG-AGAAAAATGATTC-TGTTGCCTCAATTTTAAA---AGGGATATTTTGAAGAAATAATTTTCCATATAATAGCTTCTTACG-ATCTTGCCTTTTAGCCTTGCTGGATAAAGAAATGCATACTTATAATTATTGAAGGAAGACAATTTTCCTTGTTTTATGCAAATTAGAAATATATTAGGCTATTAAATACATAATTCAAAATATACAGAATAACGGTG-TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131375813 431 + 190429646 GTGAATGACTTTCTTCAAATAATATGCTAGTGAAACGCTGAGATATTAATG--TCTAAATATTATAAAACTTTCATTTTAATATAATGTTTTGCTTTTACTTTATATTTACATTGTATTGTCTAACAAAGAAATGTGAATCTTGTTACACCTGAGAACTTGAACTGGCAATCTACA-CATTGTTGTTGAAACAATTTTAAATTAAACATATAATGAAAG-AGAAAAAGGATTC-TGTTGCCTCAATTTTAAA---AGAGATATTATGAAGAAATAATTTTCTATATAATAGCTTCTTATG-ATCTTGCCTTTTAGCTTCCCTGGATAAAGAAATGCATACTTATAATCATTGAAGGAAGGCAATTTTCCTTGTTGTCTGCAAATTAGAAATATATTAGGCTATTAAATACATAAATAATATTATGCAGAATAAAGGTA-TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130894494 431 + 189454096 GTGAATGACTTTCTTCAAATAATATGCTAGTGAAACGCTGAGATATTAATG--TCTAAATATTATAAAACTTTCATTTTAATATAATGTTTTGCTTTTACTTTATATTTACATTGTATTGTCTAACAAAGAAATGTGAATCTTGTTACACCTGAGAACTTGAACTGGCAATCTACA-CATTGTTGTTGAAACAATTTTAAGTTAAACATATAATGAAAG-AGAAAAAGGATTC-TGTTGCCTCAATTTTAAA---AGAGATATTATGAAGAAATAATTTTCTATATAATAGCTTCTTATG-ATCTTGCCTTTTAGCTTCCCTGGATAAAGAAATGCATACTTATAATCATTGAAGGAAGGCAATTTTCCTTGTTTTCTGCAAATTAGAAATATATTAGGCTATTAAATACATAAATAATATTATGCAGAATAAAGGTA-TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34885745 431 - 40319822 GTGAATGACTTTCTTCAAATAATATGCTAGTGAAACGCTGAGATATTAATG--TCTAAATATTATAAAACTTTCATTTTAATATAATGTTTTGCTTTTACTTTATATTTACATTGTATTGTCTAACAAAGAAATGTGAATCTTGTTACACCTGAGAACTTGAACTGGCAATCTACA-CATTGTTGTTGAAACAATTTTAAATTAAACATATAATGAAAG-AGAAAAAGGATTC-TGTTGCCTCAATTTTAAA---AGAGATATTATGAAGAAATAATTTTCTATATAATAGCTTCTTATG-ATCTTGCCTTTTAGCTTCCCTGGATAAAGAAATGCATACTTATAATCATTGAAGGAAGGCAATTTTCCTTGTTTTCTGCAAATTAGAAATATATTAGGCTATTAAATACATAAATAATATTATGCAGAATAAAGGTA-TT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4439963 428 - 9219162 GTGAATGACTTTCTTCAAATAATATGCTAGTGAAACGCTGAGATATTAATG--TATAAATATTATAAAACTTTCATTTTAATATAATGTTTTACTTTTACTTTATATTTACATTATATTGTCTAACAAAGAAATGTGAATCTTGTTACACCTGAGAACTTGAACTGGCAATCTACA-CA---TTGTTGAAACAATTTTAAACTAAACATATAATGAAAG-AGAAAAAGGATTC-TGTTGCCTCAATTTTAAA---AGAGATATTATGAAGAAATAATTTTCTATATAATAGCTTCTTATG-ATCTTGCCTTTTAGCTTCCCTGGATAAAGAAATGCATACTTATAATCATTGAAGGAAGGCAATTTTCATTGTTTTCTGCAAATTAGAAATATATTAGGCCATTAAATACATAAATAAAAATATGCAGAATAAAGGTA-TT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78965441 431 + 135778131 GTGAATGACTTTCTTCAAATAATATGCTAATGAAACGCTGAGATATTAATG--TCTAAATATTATAAAactttcattttaatataatgttttacttttactttatatttacattGTATTGTCTAACAAAGAAATGTGAATCTTGTTACACCTGAGAACTTGAACTGGCAATCTACA-CATTGTTGTTGAAACAATTTTAAATTAAACATATAATGAAAG-AGAAAAAGGATTC-TGTTGCCTCAATTTTAAA---AGAGATATTATGAAGAAATAATTTTCTATATAATAGCTTCTTATG-ATCTTGCCTTTTAGCTTCCCTGGATAAAGAAATGCATACTTATAATCATTGAAGGAAGGCAATTTTCCTTGTTTTCTGCAAATTAGAAATATATTAGGCTATTAAATACATAAATAAAAATATGCAGAATAAAGGTA-TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2731537 431 - 3013352 GTGAATGACTTTCTTCAAATAATATGCTAGTGAAACGCTGAGATATTAATG--TCTAAATATTATAAAACTTTCATTTTAATATAATGTTTTACTTTTACTTTATATTTACATTGTATTGTCTAACAAAGAAATGTGAATCTTGTTACACCTGAGAACTTGAACTGGCAATCTACA-CATTGTTGTTGAAACAATTTTAAATTAAACATATAATGAAAG-AGAAAAAGGATTC-TGTTGCCTCAATTTTAAA---AGAGATATTATGAAGAAATAATTTTCTATATAATAGCTTCTTATG-ATCTTGCCTTTTAGCTTCCCTGGATAAAGAAATGCATACTTATAATCATTGAAGGAAGGCAATTTTCCTTGTTTTCTGCAAATTAGAAATATATTAGGCTATTAAATACATAAATAAAAATATGCAGAATAAAGGTA-TT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963002 431 + 8656713 GTGAATGACTTTCTTCAAATAATATGCTAGTGAAACGCTGAGATATTAATG--TCTAAATATTATAAAACTTTCGTTTTAATATAATGTTTTACTTTTACTTTATATTTACATTGTATTGTCTAACAAAGAAATGTGAGTCTTGTTACACCTGAGAACTTGAACTGGCAATCTACA-CATTGTTGTTGAAACAATTTTAAATTAAACATATAATGAAAG-AGAGAAAGGATTC-TGTTGCCTCAATCTTAAA---AGGGATATTATGAAGAAATAATTTTCTATATAATAGTTTCTTATG-atcttgccttttagcttccctggataaagaaatgcatacttgcaatcattgaaggaagacaactttCCTTGTTTTCTGCAAATTAGAAATACATTAGGCTATTAAATACATAAATAAAAATATGCAGAATAAAGGTA-TT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129393497 412 - 190850796 GTGAATGCTTTTCTTTAAATAATATGCTAGTGAAAAGCTGAGATATCAATG--TCTAAATATCACAAAACTTTCATTTTAATA-AATG------TTTTACTGTATATTTGTATTTTATTGTCTAAGAAAGAAATATGTGTCTTGTTACACCTGAGAACTTGAACTGATAATTTA-A-TACTGTTGTTCAAACaattttatattaaatatataatGAGAG-AGAAAAATGATTC-TGTTGT---------------AGGAATATTTTGAAGAAATAATTTTCCATAAAATATCGTGTTAAG-ATCTTGCCTTTCAGcctctctggatgaagaaatgcacacttataatcattgaaggaagataattttccttgttttccgcaaaccagaaacatattaggctactaaatatgtaatttaaaatataCAGAATAAAGGTATTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033036 413 - 6311556 GTGAATGCTTTTCTTCAAATAATATGCTAGTGAAAAGCTGAGATATTCATG--TCTAAATATCACAAAACTTTCATTTTAATATAATG------TTTTACTTTATATTTCTATTTTATTGTCTAAGAAAGAAATGTGCATCTTGTTAGACCTGAGAACTTGAACTGGTAATCTA-A-CACTGTTGTTCAAACAATTTTATATTAAATATATAATGAGAG-AGAAAAATGATTC-TGTTAT---------------AGGAATGGTTTGAAGAAATAATTTTCCATAAAATATCATGTTAAG-ATCTTGCCTTTCAGCCTCTCTGGATGAAGAAATGCACACTTATAATCATTGAAGGAAGATAATTTTCCTTGTTTTCTGCAAACTAGAAACACATTAGGCTACTAAATATGTAATTAAAAATATACAGAATAAAGGTATTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884042 411 + 15034901 GTGAATACTTTTCTTCAAATAATATGCTAGTGAAAAGCTGAGATATTAATG--TCTAAATATCACAAAACtttcattttaata---tg------ttttactttatatttatattttattGTCTAAGAAAGAAATGTGTGTCGTGTTACACCTGAGAACTTGAACTGGTAATCTA-A-CACTGTTGTTCAAACAATTTTATATTAACTATATAATGAGAGAAAAAAAATGATTC-TGTTGT---------------AGGGATATTTTGAAGAAATAATTTTCCATAAAATATGGTGTTAAG-ATCTTGCCTATCAGCCTCCCTGGATGAAGAAATGCATACTTATAATCATTGAAGGAAGATAATTTTCCTTGTTTTCTGCAAACTAGAAACATATTAGGCTACTAAATATGCAATTAAAAATATACAGAATAAAGGTATTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26292396 419 - 93316391 GTGAATATCTTTCTTCAAAGAATATGATAATGAGTAGCTGAGATATTAATAATTCTAAATATTGTCAAACTTTCATTTTCAAATAATG------TTTTACTTTGTCTTTATATATTATTATTTAACAAAGAAATGTGCATCTTG-------TTACAACTTGAACTGGTTAATAACA-CAGTGTTATTGAAACAACTTTAAATTAAACATATAGCATGAG-AGGAAAGGAATCCTTGTTGCTTCAATTCTAGA---AGGAATATTTTAAAGAAGTTAGTTTCCATAAAATAGCTTGTTATG-TTTTTACTTTCTAACATCCTCAGATGATGAAATGCATACTTGGAATAATTGAGTGAAGAA--TTATCCTTGTTTTCTGCAAATTAGGATCATCTGAAGCTATTAAATATATCATTCAAAATGTCAAGTATAAAGGTA-TT i micMur3.chr14 I 204 I 94 s otoGar3.GL873702 909429 423 - 3201129 gtaaatatctttcttcaaataatatgctaatgaatA-CTGAAAGattaataattttatatattataaaaCTTTCA-TTTCAAATAATG------TTTTCCTTTGTCTTTATATATCATTCTTCAACAAAGAAATGTGTGTTTTGTTAAGTTTTACAACTTGATGTGGTTGTCTATA-CATTGTTAGAGAAGCAACTCTCAATTAAACATACAGTGTGAA-AGGAAAAGAATCCTTGTTGACTCAGTTCTAGA---AGGAATATTTTAAAGATGTCAGTTTCCATAAATTAACTTGTTATGTTTTTTTCTTTCTAGCATTCCTAGATGAAGAAATACATATTTGGAATAATTCCATGAAGAAATTTTTCCTTGTTTTCTATAAATCAAGATCATATTAAGCTATTAAAAATATTATTCAAAATGTGAAAAATACAGG----- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44004947 425 - 53741614 GTAAACATCTTTCTCCAAATTATCTGCTAGTAAGTAGCTGAGATATTAACAATTTCAAATATTGTAAAACTCTCATTTTCAAATAATA------CCTTCCTTTGTCATTATAATATATTGGTT-ACGAAAAAATGTG--TTTTATTGTCATTGAGAACTTACATTGGCTATCTAGAGTGTTACTGAAAAAAAAAAGTTAAATTAAGCATATGGGAAGAA-TATTAAAGGATTTTTATTTCCTCAACTTTAGAGGGAAAAATGTTTTGCAGAAATGATTTACCATGAAATAGCTTGTTATA-ATCTTGCTTTCTAGCTTCCGTGGGTGTAGAAATGCATACTTAAAATCTCTGAAGAAAGAAAATTCCCTTTATTTTCCTT---TTCTACAGGTTTTAGGTTATGGAA-ATATATTTTACAATATGAAGACTAAAGGTA-TT i canFam3.chr19 C 0 I 5 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1687273 860 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e saiBol1.JH378129 6476432 1754 - 25294431 M a score=156610.000000 s hg38.chr9_KI270719v1_random 13026 22 + 176845 ATAGAACCTAAGAATTATATAA s panTro5.chr4 135040333 22 + 194502333 ATAGAACCTAAGAATTATATAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 20868 22 - 70559 ATAGAACCTAAGAATTATATAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434253 22 - 115148730 ATAGAACCTAAGAATTATATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376244 22 + 190429646 ATAGAACCTAAGAATTATATGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130894925 22 + 189454096 ATAGAACCTAAGAATTATATGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886176 22 - 40319822 ATAGAACCTAAGAATTATATGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440391 22 - 9219162 ATAGAACCTAAGAATTATATGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78965872 22 + 135778131 ATAGAACCTaagaattatataa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2731968 22 - 3013352 ATAGAACCTAAGAATTATATGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963433 22 + 8656713 ATAGAACCTAAGAATTACGTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129393909 16 - 190850796 ATATAAACTAAGAATT------ i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033449 21 - 6311556 ATAGAAACTAAGAATTATACA- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884453 21 + 15034901 ATAGAAACTAAGAATTATATA- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44005377 22 - 53741614 ACAGAAACTAGGGATTATGTAA i canFam3.chr19 I 5 C 0 e micMur3.chr14 26292815 94 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1687273 860 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 909852 0 - 3201129 C e saiBol1.JH378129 6476432 1754 - 25294431 M a score=962161.000000 s hg38.chr9_KI270719v1_random 13048 158 + 176845 AGAATTATATACATAAAGTAATGAATACATATACAAATAGTATAAAAATACTAAAAATAGTATTTGCTTATTGATTAATTACTATGGGTATTATATAACTCTTAGTTTCTACATTGCCTTTCTATTCTTAGTTATTATAATAGGTATATTATAATTAC s panTro5.chr4 135040355 154 + 194502333 AGAATTATATACATAAAGTAATGAATACATATACAAATAGTATAAAAATACTAAAAATAGTATTTGCATATTGATTAATTTCTATGGGTATTATATCACTCTTAGTTTCTACATTGCCTTTCTATTC----TTATTATAATAGGTATATTATAATTAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 20890 158 - 70559 AGAATTATATACATAAAGTAATGAATACATATACAAATAGTATAAAAATACTAAAAATAGTATTTGCTTATTGATTAATTACTATGGGTATTATATAACTCTTAGTTTCTACATTGCCTTTCtattcttagttattataataggtatattataattac i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434275 158 - 115148730 AGAATTATATACATAAAGTAATGAATACATATACAAATAGTATAAACATACTAAAAATAGTATTTGCATATTGATTAATTACTATAGGTATTATATAACTCTTAGTTTCTACATTGCCTTTCTACTCTTAGTTATTATAataggtatattataattgc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376266 157 + 190429646 AGAATTATATATATAAAGTAATAAATACATATACAAATGGTATAAAAATAAT-AAAATAGTATTTGCATATTGATTAATTACTATAGGTATTATATAACTCTTAGTTTCTACATCTCCTTTCTATTCTTAGTTCTTATAATAGGTATATTATAATTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130894947 157 + 189454096 AGAATTATATATATAAAGTAATAAATACATATACAAATGGTATAAAAATAAT-AAAATAGTATTTGCATATTGATTAATTACTATAGGTATTATATAACTCTTAGTTTCTACATCTCCTTTCTATTCTTAGTTCTTATAATAGGTATATTATAATTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886198 157 - 40319822 AGAATTATATATATAAAGTAATAAATACATATACAAATGGTATAAAAATAAT-AAAATAGTATTTGCATATTGATTAATTACTATAGGTATTATATAACTCTTAGTTTCTACATCTCCTTTCTATTCTTAGTTCTTATAATAGGTATATTATAATTAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440413 158 - 9219162 AGAATTATATATATAAAGTAATAAATACATATACAAATGGTATAAAAATAATAAAAATAGTATTTTCATATTGATTAATTACTATAGGTATTATATAACTCTTAGTTTCTTCATCGCCTTTCTATTCTTAGTTCTTATAATAGGTATATTATAATTAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78965894 154 + 135778131 agaat----tatataaagTAATAAATACATATACAAATGATATAAAAATAATAAAAATAGTATTTGCATATTGATTAATTACTATAGGTATTATATAACTCTTAGTTTCTACGTCACCTTTCTATTCTTAGTTATTATAATAGGTATATTATAATTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2731990 158 - 3013352 AGAATTATATATATAAAGTAATAAATACATATACAAATGGTATAAAAATAATAAAAATAGTATTTGCATATTGATTAATTACTATAGGTATTATATAACTCTTAGTTTCTACATCGCCTTTCTATTCTTAGTTCTTATAATAGGTATATTATAATTAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963455 158 + 8656713 AGAATTATATACATAAAGTAATAAACACATATACAAATGGTATAAAAATAATAAAAATAGTATCTGCATATTGATTAATTACTATGGGTATTATATAACTCTTAGTTTCTACATTGCCTTTCTATTCTTAGTTATTATAACAGGTATATTATAAATAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129393925 138 - 190850796 ------------ATATAGTAATGAATACATATACAAATAGTATAAA-ATACTAAAAATAGTATTTTCACATTTATTAATTACTATGTGTATTATAGAACTCTTAGTTT---CTTTATGTTTCTATTC----TTATTATACTAGGCTTCTTATAATTAC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033470 141 - 6311556 ------------ATATAGTAATGAATACATATACAAATAGTATAAA-ATACTAAAAATAGTATTTTCACATTTATTAACTACTATGTGTATTATAGAACTCTTAGTTC-TATATTATGTTTCTATTCTTAGTTATTATACTAGG---CTTATAATTAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884474 145 + 15034901 ------------ATATAGTAATGAATAAATATACAAATAACATAAA-ATACTAAAAAGAGTATTTTCATATTTATTAATTACTATGTGTATTATAGAACTCTTAGTTTCTATATTGCGTTTCTATTCTTAGTTATTATACTAGGCTTATTACAATTAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 909852 31 - 3201129 -------------------------TACATATAAGAA----------------GAAAT--------------------------TAGGAATGATGTAA------------------------------------------------------------ i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26292815 94 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1687273 860 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44005399 0 - 53741614 C e saiBol1.JH378129 6476432 1754 - 25294431 M a score=121831.000000 s hg38.chr9_KI270719v1_random 13206 18 + 176845 TAATACGTATAAACTACT s panTro5.chr4 135040509 18 + 194502333 TAATACATATAAACTACT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21048 17 - 70559 taata-gtatAAACTACT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434433 18 - 115148730 taatacatataaactact i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376423 18 + 190429646 TAATACATAAAAACTACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895104 18 + 189454096 TAATACATAAAAACTACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886355 18 - 40319822 TAATACATAAAAACTACT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440571 18 - 9219162 TAATACATAGAAACTACT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966048 18 + 135778131 TAATACATAGAAACTACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2732148 18 - 3013352 TAATACATAGAAACTACT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963613 14 + 8656713 TA----ATAGAAACTACT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394063 14 - 190850796 TAATACATATAAAC---- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033611 18 - 6311556 TAATACATATAAACTATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884619 18 + 15034901 TAATACATATAAACTACT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44005399 18 - 53741614 TAATACATATGAACTATT i canFam3.chr19 C 0 C 0 e micMur3.chr14 26292815 94 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1687273 860 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 909883 0 - 3201129 C e saiBol1.JH378129 6476432 1754 - 25294431 M a score=613499.000000 s hg38.chr9_KI270719v1_random 13224 105 + 176845 TATAGTTTATATGAATGTGT-----------TATATGT---ACATGTATattataataactaataccgataaactatttacaatt-----at-acatat-tataataactaataaatataaACTAC s panTro5.chr4 135040527 98 + 194502333 TATAGTTTATATGAATGTGT-----------TATATGT---ACATGTATATTAtaataactaatac-------ctatttacagtt-----at-acatat-tataataactaataaatataaGCTAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21065 105 - 70559 TATAGTTTATATGAATGTGT-----------TATATGT---ACATGTATattataataactaatacctataaactatttacaatt-----at-acatat-tataataactaataaatataaactac i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434451 105 - 115148730 tatagtttatatgaa--tgt-----------tatatgt---acatgtatattataataaccaatacctagaaactatttacagtt-----ataacatacatattataactaataaatataaAATAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376441 109 + 190429646 TATAGTTTATATAAATTTGT-----------TATATGT---ACATGTATATTA-aataactaatacctataaactatttacagttataacat-acatat-tttaataactaacaaatataaactGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895122 110 + 189454096 TATAGTTTATATAAATTTGT-----------TATATGT---ACATGTATATTAtaataactaatacctataaactatttacagttataacat-acatat-tttaataactaacaaatataaactaC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886373 105 - 40319822 TATAGTTTATATAAATTTGT-----------TATATGT---ACATGTATATTATAATAACTAATACCTATAAACTATTTACAGTT-----AT-ACATAT-TTTAATAACTAACAAATATAAACTAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440589 109 - 9219162 TATAGTTTATATAAATTTGT-----------TATATGT---ACATGTATATTAtaataactaatacctataaactatttacagttataac-t-acatat-tttaataactaacaaatataaactaC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966066 110 + 135778131 TATAGTTTATATAAATTTGT-----------TATATGT---ACATGTATATTAtaataactaatacctataaactatttacagttataacat-acatat-tttaataattaacaaatataaactaC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2732166 110 - 3013352 TATAGTTTATATAAATTTGT-----------TATATGT---ACATGTATATTATAATAACTAATACCTATAAACTATTTATAGTTATAACAT-ACATAT-TTTAATAACTAACAAATATAAACTAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963627 110 + 8656713 TATAGTTTATATAAATTTGT-----------TATATGT---ACATGCATATTAtaataactaatacctataaactatttacagttgtaacat-acatat-tttaataactaacaaatataaactaC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394077 119 - 190850796 TACTATTTATATGAATTTGTTATAATACGTGTATATGTATAATATGTATATTGTAATAACTAATACACATAAACTATTTACAGTT-----AT-ACATAC-TATGATAACTAATAAATATATACCTC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033629 111 - 6311556 TACTATTTATATGAATTGGTTATAATACATGTATATGTATAATATGTATATT---ATAACTAATATATATAAATGATTT--AGTT-----AT-ACATAT-T---ATAACTAATAAATATATACCAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884637 119 + 15034901 TACTATTTATATGAATTTGTTTTAATACATGTATATGTATAATATGTATATTATAATAACTAATACATATAAACTATTTACAGTT-----AT-ACATAT-TACAATAATTAGTAAATATATACCAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 909883 31 - 3201129 -------------------------------CATATAT----------------AATAACTAATACCTATAAACT---------------AT--------T------------------------- i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26292815 94 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1687273 860 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44005417 0 - 53741614 C e saiBol1.JH378129 6476432 1754 - 25294431 M a score=239548.000000 s hg38.chr9_KI270719v1_random 13329 26 + 176845 TTATTGTCAAAACTGTTTTTAACTAT s panTro5.chr4 135040625 26 + 194502333 TTATTGTCAAAACTGTTTTTAACTAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21170 26 - 70559 ttaTTGTCAAAACTGTTTTTAACTAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434556 26 - 115148730 TTATTGTCAAAACTGTTTTTAACTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376550 26 + 190429646 TTATTGTCAAAACTGTTTTTAACTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895232 26 + 189454096 TTATTGTCAAAACTGTTTTTAACTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886478 26 - 40319822 TTATTGTCAAAACTGTTTTTAACTAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440698 25 - 9219162 TTATTGTC-AAACTGTTTTTAACCAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966176 26 + 135778131 TTATTGTCAAAACTGTTTTTAACTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2732276 26 - 3013352 TTATTGTCAAAACTGTTTTTAACTAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963737 26 + 8656713 TTATTGTCAAAACTGTTTTTAACTAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394196 26 - 190850796 TTATTGTCAAAATTGTTTTTAAGTAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033740 26 - 6311556 TTATTGTCAAAACTGTTTTTGAGTAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884756 26 + 15034901 TTATTGTCAAAACTGTTTTTAAGTAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 909914 26 - 3201129 TTATTGTAAAAACTACTTTTGACTAT i otoGar3.GL873702 C 0 I 9 s canFam3.chr19 44005417 26 - 53741614 CTAATGTGAAAGCTATTTTAAAATAC i canFam3.chr19 C 0 C 0 e micMur3.chr14 26292815 94 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1687273 860 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e saiBol1.JH378129 6476432 1754 - 25294431 M a score=310575.000000 s hg38.chr9_KI270719v1_random 13355 32 + 176845 TAAAAGAT----------AAAGCACACAGATATGTTTTCTTT s panTro5.chr4 135040651 32 + 194502333 TAAAAGAT----------AAAGCACATAGATATGTTTTCTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21196 32 - 70559 TAAAAGAT----------AAAGCACACAGATATGTTTTCTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434582 31 - 115148730 TAAAAGAT----------AAAGCACACAGATATG-TTTCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376576 32 + 190429646 TAAAAGAT----------AAAGCACACAGATATGTTTTCTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895258 32 + 189454096 TAAAAGAT----------AAAGCACACAGATATGTTTTCTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886504 32 - 40319822 TAAAAGAT----------AAAGCACACAGATATGTTTTCTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440723 32 - 9219162 TAAAAGAT----------AAAGCACACAGATATGTTTTCTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966202 32 + 135778131 TAAAAGAT----------AAAACACACAGATATGTTTTCTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2732302 32 - 3013352 TAAAAGAT----------AAAGCACACAGATATGTTTTCTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963763 32 + 8656713 TAAAAGAT----------AAAGCACACAGATATGTTTTCTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394222 32 - 190850796 TCAAAGAT----------AAAGCACACCAATATGTTTTCTAC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033766 32 - 6311556 TCAAAGAT----------AAAGCACACCAATATGTTTTCTAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884782 32 + 15034901 TCAGAGAT----------AAAGCACACCAATATGTTTTCTAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26292909 32 - 93316391 TAAAAGAT----------AAAGCACATAAATATGTTTTCTAT i micMur3.chr14 I 94 C 0 s otoGar3.GL873702 909949 32 - 3201129 TAAAAGAT----------AAAGCATACAGGTATGTTTTATAT i otoGar3.GL873702 I 9 C 0 s canFam3.chr19 44005443 40 - 53741614 TAAAGGATGTAGAAGAAAAAAATGCATAGATATGTTT--TGT i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1687273 860 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e saiBol1.JH378129 6476432 1754 - 25294431 M a score=326390.000000 s hg38.chr9_KI270719v1_random 13387 32 + 176845 ACTAGGTATTCCCAGAAGCACTCATAAAACTC s panTro5.chr4 135040683 32 + 194502333 ACTAGGTATTCCCAGAAGCACTCTTAAAACTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21228 32 - 70559 ACTAGGTATTCCCAGAAGCACTCATAAAACTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434613 32 - 115148730 ACTAGGTATTCCCAGAAACACTCATAAAACTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376608 32 + 190429646 ACTAGATATTCCCAGAAGCACTCATAAAACTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895290 32 + 189454096 ACTAGATATTCCCAGAAGCACTCATAAAACTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886536 32 - 40319822 ACTAGATATTCCCAGAAGCACTCATAAAACTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440755 32 - 9219162 ACTAGATATTCCTAGAAGCACTCATAAAACTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966234 32 + 135778131 ACTAGATATTCCCAGAGGCACTCATAAAACTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2732334 32 - 3013352 ACTTGATATTCCCAGAAGCACTCATAAAACTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963795 25 + 8656713 AC-------TCCCAGAAGCACTCATAAAACTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394254 32 - 190850796 ACTAGGTATTCCAAGAAGCCCTCATAAAACTC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033798 29 - 6311556 ACTAGTTATTCC---AAGCACTCATAAAACTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884814 32 + 15034901 ACTAGGTATTCCAAGAAGCACTCATAAAACTC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26292941 32 - 93316391 ACCAGGTACTCCAAGAAGCTCTCATAAAACTC i micMur3.chr14 C 0 I 152 s otoGar3.GL873702 909981 32 - 3201129 ACCAGGTTCTTTAAGTAGCATTCataaaattt i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 44005483 32 - 53741614 ACTAGGTACTCCAAGGAGCACTCATAATACTG i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1688133 32 + 5974691 ACCAAGTACTCCAGGAAGATTGCATGAAACTC i dasNov3.JH569232 I 860 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e saiBol1.JH378129 6476432 1754 - 25294431 M a score=1237887.000000 s hg38.chr9_KI270719v1_random 13419 138 + 176845 ----GGAGTTTTCAT-ATAGCAGTGATTACAGACTTGCTATTTttattattccca-tttcatagattaagagcacaagactcattttagtgttatttagccatgtcacagagccagtTCCCAGATA--TTTT-------TTCCACTTGTTTTG s panTro5.chr4 135040715 139 + 194502333 ----GGGGTTTTCAT-ATAGCAGTGATTACAGACTTGCTATTTTTATTATTCCCA-TTTTATAGATTAAGGGCACAAGTCTCATATTAGTGTTATCTAGCCATGTCATAGAGCCAATTCCCAGATAT-TTTT-------TTCCACTTGTTTTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21260 138 - 70559 ----GGGGTTTTCAT-ATAGCAGTGATTACAGACTTGCTATTTttattattccca-ttttatagattaagagcacaagactcatattagtgttatttagccatgtcatagagccagtTCCCAGATA--TTTT-------TTCCACTTGTTTTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434645 138 - 115148730 ----AGGATTTTCAT-ATAGCAGTGATtatggacttgctatttttattattccca-ttttatagattaagagcacaaggctcatattagtgttat-tagccatgtcatagagccaatTCCCAGATAT-TTTT-------TTCCACTTGTTTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376640 139 + 190429646 ----AGGATTTTCAT-ATAGCAGTGATGACAGACTTGCTATTTttattattccca-ttttacagattaagagcacaaggctcatattagtgttagttatccatgtcatagagccaatTCCCAGATAT-TTTT-------TTCCACTTGCTTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895322 139 + 189454096 ----AGGATTTTCAT-ATAGCAGTGATGACAGACTTGCTATTTttattattccca-ttttacagattaagagcacaaggctcatattagtgttagttatccatgtcatagagccaatTCCCAGATAT-TTTT-------TTCCACTTGCTTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886568 139 - 40319822 ----AGGATTTTCAT-ATAGCAGTGATGACAGACTTGCTATTTttattattccca-ttttacagattaagagcacaaggctcatattagtgttagttatccatgtcatagagccaatTCCCAGATAT-TTTT-------TTCCACTTGCTTTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440787 139 - 9219162 ----AGGATTTTCAT-ATAGCAGTGATGACAGACTTGCTATTTttattattccca-ttttacagattaagagcacaaggctcatattagtgttagttatccatgtcatagagccaatTCCCAGATAT-TTTT-------TTCCACTTGCTTTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966266 139 + 135778131 ----AGGATTTTCAT-ATAGCAGTGATGACAGACTTGCTATTTttattattccca-ttttacagagtaagagcgcaaggctcatattagtgttagttatccatgtcatagagccaatTCCCAGATAT-TTTT-------TTCCACTTGCTTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2732366 139 - 3013352 ----AGGATTTTCAT-ATAGCAGTGATGACAGACTTGCTATTTttaatattccca-ttttacagattaagagcacaaggctcatattagtgttagttatccatgtcatagagccaatTCCCAGATAT-TTTT-------TTCCACTTGCTTTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963820 137 + 8656713 ----AGGATTTTCAT-ATAGCAGTGATGACAGACTTGCTATTTttattattctca-ttttacagattaagagcacaaggctcaTATTAGTGTTAGTTATCCATATC--AGAGCCAATTCCCAGATAT-TTTT-------TTCCACTTGCTTTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394286 139 - 190850796 ----ATGATTTTCAT-ATAGCAGTGATTACAGACTTGCTATTTCTATCATTCCCA-TTTTATAGATTAAGAGCACAAGGCCCATTTTGGTGTCATTTAACCATGTCTTAGAGCCAATTCCCAGATAT-TTTT-------GTCCACTTGTTTTG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033827 139 - 6311556 ----ACGATTTTCAT-ATAGCAGTGATTACAGACTTGCTGTTTTCATCATTCCCA-TTTTATAGATAAAGAACACAAGGCCCATTTTGGTGTCATTTAACCATGTCTTAGAGCCAATTCCCAGAAAT-TTTT-------GTCTACTTGTTTTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884846 139 + 15034901 ----ATGATTTTCAT-ATAGCAGTGATTACAGACTTGCTGTTTTTATCATTCTCA-TTTTATAGATTAAGAGCACAAGGCTCATTTTGGTGTCATTTAATCATGTCTTAGAGCCAATTCCCAGATAT-TTTT-------GTCCACTTGTTTTG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 910016 133 - 3201129 ----aaatttttcat-ataataG---CTGGAGGCTTGGTATTT-CACTATTCCAA-CTTTATAGAT---GATTACCAGGTTTATATTAATGTTATTTAAGCATATCATAGGACCAATTCCCAGCAATCTTTT-------TTCTGTTTGCTTTA i otoGar3.GL873702 I 3 C 0 s canFam3.chr19 44005516 148 - 53741614 ----AATGGATTCATAATGGTGGTGATTGGAAGGTTGCTGTTTTTACTATTCCAATTTTTATAGAGGAAGAACACAAGGCTCCTATTAGTGTCATTGAATCATATCATCGAGAGGATTCCCTGAGAT-TTTTATTCTGATTTTATTTTTTTCA i canFam3.chr19 I 1 I 3 s dasNov3.JH569232 1688165 144 + 5974691 Ataactattttccat-atgacaaccactagaggtttgatatgtttcttgttccca-ttttgtcaatgaagaactcaaggctcaTATTACTGATATTTTTCAAAGTTATAGGGCCAATTCCCAGAGATGTTAT-------TTCTGCTTGTTTTG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26292973 152 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e saiBol1.JH378129 6476432 1754 - 25294431 M a score=188301.000000 s hg38.chr9_KI270719v1_random 13557 15 + 176845 TCATGAAGAATGAGA s panTro5.chr4 135040854 15 + 194502333 TCATGAAGAATGAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21398 15 - 70559 TCATGAAGAATGAGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434783 15 - 115148730 TCACGAAGAATGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376779 15 + 190429646 TCATGAAGAATGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895461 15 + 189454096 TCATGAAGAATGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886707 15 - 40319822 TCATAAAGAATGAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440926 15 - 9219162 TCATGAAGAATGAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966405 15 + 135778131 TCATGAAGAATGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2732505 15 - 3013352 TCATGAAGAATGAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963957 15 + 8656713 TCATGAAGAATGAGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394425 15 - 190850796 TCCTGAAGAATGAAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4033966 15 - 6311556 TCCTGAAGAATGAGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14884985 15 + 15034901 TCCTGAAGAATGAGA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26293125 15 - 93316391 TCATGAAGAATGAGA i micMur3.chr14 I 152 C 0 s otoGar3.GL873702 910149 15 - 3201129 TCATGAAGGATGAGA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44005667 15 - 53741614 TCATGGAGAATGAGA i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1688309 15 + 5974691 TCATGTAGAATGAAA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e saiBol1.JH378129 6476432 1754 - 25294431 M a score=827136.000000 s hg38.chr9_KI270719v1_random 13572 65 + 176845 AGTAGAATCAGCATCAAGTTTGTGCTAAACAAGTACAATAATAAGAAAGCACAGCAAATGCTGAC s panTro5.chr4 135040869 65 + 194502333 AGTAGAATCAGCATCAAGTTTGTGCTAAACAAGTACAATAATAAGAAAGCACAGCAAATGGTGAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21413 64 - 70559 AGTAGAATCAGCATCAAGTTTGTGCTAAACAAGTACAATAATAAG-AAGCACAGCAAATGCTGAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434798 65 - 115148730 AGTAGAATCAGCATCAAGTTTGTGCTAAACAAGTTCAATAATAAGAAAGCACAGCAAATGCTGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376794 65 + 190429646 AGTAGAATCAGCATCAAGTTTGTGCTAAGCAAGTACGATAATAAGAAAGCACAGCAAATGCTGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895476 65 + 189454096 AGCAGAATCAGCATCAAGTTTGTGCTAAGCAAGTACGATAATAAGAAAGCACAGCAAATGCTGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886722 65 - 40319822 AGTAGAATCAGCATCAAGTTTGTGCTAAGCAAGTACGATAATAAGAAAGCACAGCAAATGCTGAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4440941 65 - 9219162 AGTAGAATCAGCATCAAGTTTGTGCTAAGCAAGTACGATAATAAGAAAGCACAGCAAATGCTGAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966420 65 + 135778131 AGTAGAATCAGCATCAAGTTTGTGCTAAGCAAGTACGATAATAAGAAAGCACAGCAAATGCTGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2732520 65 - 3013352 AGTAGAATCAGCATCAAGTTTGTGCTAAGCAAGTACGATAATAAGAAAGCACAGCAAATGCTGAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5963972 65 + 8656713 AGTAGAATCAGCATCAAGTTTGTGCTAAGCAAGTATGATAATAAGAAAGCACAGCAAATGCTGAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394440 65 - 190850796 AGTAGAATCAGCATCAAGTTTGTGCTAAGCAAGTACGATAATAAGAAAGTACCACAAATGCTGAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478186 65 - 25294431 AGTAGAATCGGCAGCAAGTTTATGCTAAGCAAGTACAATAATAAGAAAGCACCACAAATGCTGAT i saiBol1.JH378129 M 1754 C 0 s cebCap1.NW_016107420v1 4033981 64 - 6311556 AGTAAGATCAGCATCAAGTTTGTGCTAAGCAAGTACAATAATAAGAAAGCA-CACAAATACTGAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14885000 64 + 15034901 AGTAGAATCAGCA-CAAGTTTGTGCTAAGCAAGTACAATAATAAGAAAGCACCACAAATGCTGAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26293140 65 - 93316391 GGTAGAAACAGCATTAAGATTATGCTAAGAAACTATTGTAGTAAGACAGCACAGCAAATGCTGAC i micMur3.chr14 C 0 I 68 s otoGar3.GL873702 910164 65 - 3201129 AGTAGAATCAGCATTAAGTGTGTGCTAAGCAACTATGATAATAAGATAGCACAACAAATGCTGAC i otoGar3.GL873702 C 0 I 2 s canFam3.chr19 44005682 63 - 53741614 -ATAGAATCAGCATCAAGTTTGTGTTAAGCAAATATTATAAAAAGAAAGCACAACAAA-GTTGAC i canFam3.chr19 C 0 I 2 s dasNov3.JH569232 1688324 65 + 5974691 AGGAGAACTGGTGTCAAGTTTGTGCAAAACAAGTTCTGAAATAAGAAAGCATGGCAAATGCTGAC i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I a score=268279.000000 s hg38.chr9_KI270719v1_random 13637 27 + 176845 --TAGACTGTAAGAATATTTTTGCTTTTA s panTro5.chr4 135040934 27 + 194502333 --TAGACTGTAAGAATATTTTTGCTTTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21477 27 - 70559 --TAGACTGTAAGAATATTTTTGCTTTTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434863 27 - 115148730 --TAGACTGTAAGAATACTTTTGCTTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376859 27 + 190429646 --TAGCCTGTAAAAATATTTTCGCTTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895541 27 + 189454096 --TAGCCTGTAAAAATATTTTCGCTTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886787 27 - 40319822 --TAGCCTGTAAAAATATTTTCGCTTTTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441006 27 - 9219162 --TAGTCTGTAAAAATATTTTTGCTTTTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966485 27 + 135778131 --TAGCCTGTAAAAATATTTTTGTTTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2732585 27 - 3013352 --TGGCCTGTAAAAATATTTTTGCTTTTA i manLeu1.NW_012103277v1 C 0 M 795 s colAng1.NW_012114544v1 5964037 27 + 8656713 --CAGACTGTAAGAATATTTTTGCTTTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394505 27 - 190850796 --TAGATCATGAAAATAGTTTTGCTTTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478251 27 - 25294431 --TAGACCATGAAAATAGTTTTGCTTTTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034045 27 - 6311556 --TAGACCATGAAAATAGTTTTGCTTTTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14885064 27 + 15034901 --TAGACCATGAAAATAGTTTTGCTTTTA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 910231 27 - 3201129 --GGTACCATAAGAAAATTTTTGTTTTTA i otoGar3.GL873702 I 2 C 0 s canFam3.chr19 44005747 27 - 53741614 --GGGACTGTAAGAATATTTTTCTTTTTA i canFam3.chr19 I 2 C 0 s dasNov3.JH569232 1688389 29 + 5974691 TAGGGACTCTAAGAATATTTTAGTTTCTA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293205 68 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I a score=323984.000000 s hg38.chr9_KI270719v1_random 13664 39 + 176845 GGCTACCCAAAAAAG--ATAAGATATATGAGGTGATCAAAG s panTro5.chr4 135040961 39 + 194502333 GGCTACCCAAAAAAG--ATAAGATATATGAGGTGATCAAAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21504 39 - 70559 GGCCACCCAAAAAAG--ATAAGATATATGAGGTGATCAAAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434890 39 - 115148730 GGCTACCCAAAAAAG--ATAAGATATATGAGGAGATCAAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376886 39 + 190429646 GGCTACCCAAAAAAG--ATAAGATATATGAGGCGATCAAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895568 39 + 189454096 GGCTACCCAAAAAAG--ATAAGATATATGAGGCGATCAAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886814 39 - 40319822 GGCTACCCAAAAAAG--ATAAGATATATGAGGCGATCAAAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441033 39 - 9219162 GGCTACCCAAAAAAG--ATAAGATATATGAGGCGATCAAAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966512 39 + 135778131 GGCTACCCAAAAAAG--ATAAGATATATGAGGCGATCAAAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964064 39 + 8656713 GGCTACCCAAAAAAG--ATAAGATATATGAGGTGATCAAAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394532 38 - 190850796 GGCTA-CCAGAAAAG--ATAAGATATATGAAACAATCAAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478278 38 - 25294431 GGCTA-CCAAAATAG--ATAAGATATATGAAGCAATCAAAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034072 38 - 6311556 CGCTA-CCAAAAAAG--ATAAGATATATGAAGCAACCAAAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14885091 40 + 15034901 GGCTA-CCAAAAAAAATATAAGATATATGAAGCAATCAAAG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 910258 39 - 3201129 GGTGAACGAAGAAAG--AAATGATATGTGACCCAATACATT i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 44005774 39 - 53741614 GGCTAACAAAGTAAG--ATATAATATGTGAGCTGATAAAAG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1688418 39 + 5974691 GGCTAACAAAGTAAT--ATATCATATGTGAGCCAATACATA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293205 68 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=481837.000000 s hg38.chr9_KI270719v1_random 13703 44 + 176845 TG--------AATAATTATATAAACAAGAGGAATTAGAATATGAATAAGCCA s panTro5.chr4 135041000 44 + 194502333 TG--------AATAATTATATAAACAAGAGGAATTAGAATATGAATAAGCCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21543 44 - 70559 TG--------AATAATTATATAAACaagaggaattagaatatgaataagcca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434929 44 - 115148730 TG--------AATAATTATATAAACAAGAGGAATTAGAATATAAATAAGCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376925 44 + 190429646 TG--------AATGATTATATAAACAAGAAGAATTAGAATATAAATAAGCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895607 44 + 189454096 TG--------AATGATTATATAAACAAGAAGAATTAGAATATAAATAAGCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886853 44 - 40319822 TG--------AATGATTATATAAACAAGAAGAATTAGAATATAAATAAGCCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441072 44 - 9219162 TG--------AATGATTATATAAACAAGAAGAATTAGAATATAAATAAGCCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966551 44 + 135778131 TG--------AATGATTATATAAACAAGAAGAATTAGAATATAAATAAGCCA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964103 44 + 8656713 TG--------AATAATTACATAAACAAGAGGAATTAGAATATAAATAAGACA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394570 44 - 190850796 TG--------AATAATTGTATAAACCAGAGGAATTAGAATATAAATAAGCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478316 44 - 25294431 TG--------AATAATTATACAAACAAGAGGAATTAGAATACAAATAAGCTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034110 44 - 6311556 TG--------AATAATTATATAAACAAGAGGAATCAGAATATAAATAAGCCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14885131 44 + 15034901 TG--------AATAATTATATAAACAAGAGGAATTAGAATGTAAATAAGCCA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26293273 44 - 93316391 TG--------AATAATTATATAAACAAGAGGACTTAGGATATGAATAAACCA i micMur3.chr14 I 68 I 12 s otoGar3.GL873702 910300 52 - 3201129 TGACTTTTATAATAATTATATAAGCAAGAGGACTCAGGATATGAATGAGCCA i otoGar3.GL873702 I 3 I 1 s canFam3.chr19 44005813 35 - 53741614 TG--------GATAATTATATGACCA---------AGGATATAAACAAGCCA i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1688457 44 + 5974691 TA--------TAAAATTATATGAATAACAGGAACTTAGATATAAATAACTCA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=19680.000000 s hg38.chr9_KI270719v1_random 13747 33 + 176845 GGAAAAATAGGAATAGTCCAAAA------------------------------AAACACACAC s panTro5.chr4 135041044 33 + 194502333 GGAAAAATAGGAATAGGCCAAAA------------------------------AAACACACAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21587 32 - 70559 ggaaaaataggaataggCC-AAA------------------------------AAACACACAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90434973 32 - 115148730 GAAAAAATAGGAATAGGCC-AAA------------------------------AAACACACAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131376969 50 + 190429646 GGAAATATAAGAATAAGCC-AAA------------acacacacacacacacacacacacacac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895651 54 + 189454096 GGAAATATAAGAATAAGCC-AAA--------acacacacacacacacacacacacacacacac i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886897 62 - 40319822 GGAAATATAAGAATAAGCC-AAAacacacacacacacacacacacacacacacacacacacac i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441116 50 - 9219162 GGaaaaaaaaaaaaaaaaa-aaa------------aaaaaaaaaaaaaaaaaCACACACACAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966595 37 + 135778131 GGAAATATAAGAATAAGCC-aaa------------aaaaaaaaaaaaa-------------aC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964147 32 + 8656713 GGAAATTTAAGAATAAGCC-AAA------------------------------AAACACACAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394614 30 - 190850796 GGAGAAATAGGAATAAGCC-AAA------------------------------AAA--AAAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478360 32 - 25294431 GAAGAAATAGGAATAAGCC-AAA------------------------------AAAATAAAGT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034154 31 - 6311556 GGAGAAATAGGAATAAGCC-AAA------------------------------AAA-TAAAGC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14885175 30 + 15034901 GGAGAAATAGGAATAAGCC-AAA------------------------------AGT--AAAGT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 910353 11 - 3201129 TGAGAAATAAG---------------------------------------------------- i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44005849 13 - 53741614 TGAAATACAAAAA-------------------------------------------------- i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1688501 6 + 5974691 ----ATACAA----------------------------------------------------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293317 12 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=743185.000000 s hg38.chr9_KI270719v1_random 13780 89 + 176845 ACCCATTTCTTATTTAAACTTAAAAGGAGACA-AATTCATTCAATCTATATATATTTATTTTGCTACCTCAATAGAGATAAATATCTTCT s panTro5.chr4 135041077 89 + 194502333 ACCCATTTCTTATTTAAACCTAAAAGGAGACA-AATTCATTCAATCTATACATATTTATTTTGCTACCTCAATAGAGATAAATATCTTCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21619 89 - 70559 ACCCATTTCTTATTTAAACCTAAAGGGAGACA-AATTCATTCAATCTATACATATTTATTTTGCTACCTCAATAGAGATAAATATCTTCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435005 89 - 115148730 GCCCATTTCTTATTTAAACCTAAAGGGAGACA-AATTCATTCAATCTATACATATTTATTTTGCTACCTCAATAGAGATAAACATCTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377019 79 + 190429646 acCTATTTCTTATTTAAACCTAAATGGAGACA-AATTCATTCTATC----------TATTTTGCTACCTCAATAGAGATAAATATCTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895705 79 + 189454096 acCTATTTCTTATTTAAACCTAAATGGAGACA-AATTCATTCTATC----------TATTTTGCTACCTCAATAGAGATAAATATCTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34886959 79 - 40319822 acCTATTTCTTATTTAAACCTAAATGGAGACA-AATTCATTCTATC----------TATTTTGCTACCTCAATAGAGATAAATATCTTCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441166 77 - 9219162 ACCTATTTCTTATTTAAACCTAAATG--GACA-AATTCATTCAATC----------TATTTTGCTACCTCAATAGTGATAAATATCTTCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966632 79 + 135778131 ACCTATTTCTTATTTAAACCTAAATGGAGACA-AATTTATTCAATC----------TATTTTGCTACCTCAATAGACATAAATATCTTCT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964179 79 + 8656713 ATCTATTTCTTATTTAAACCTAAATGGAGACA-AATCCATTCAATC----------TATTTTGCTACCTCAATGGAGATAAATATCTTCT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394644 89 - 190850796 GTCTATTTCTTATTTAAACCTAAAGGGAGATA-AATTAATTCAATCTATACACATTTATTTTGCTACTTCATTAGAAATAAATATCTTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478392 89 - 25294431 GTCTATTTCTTATTTAAACCTAAAGGGAAATA-AATTAATTCAATCTCTGCACATTTATTTTGCTACTTCATTAGAGATAAATATCTTCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034185 87 - 6311556 GTCTATTTCTTATTTAAACCTAAA--GAGATA-AATTAATTCAATCTATACACATTTATTTTTCTACTTCGTTAGAGATAAATATCTTCC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14885205 85 + 15034901 GTCTATTTCTTATTTAAACCTAAAGGGAGATA-ACTTAATTCAATCTATATAC----ATTTTGCTACTTCATTAGAGACAAATATCTTCT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26293329 90 - 93316391 ACCTATTTCTTACTTAAACCTAGAAGGAGACAAAATTCTTTCAATTTTTAGATATTTACTTTGTTACCTCATTTGAGATAAATATCTTCT i micMur3.chr14 I 12 I 2494 s otoGar3.GL873702 910364 69 - 3201129 ACCTATTTCTTATTTAAACATAGAGGGAGACAGAATTCTTTCAATTTTTAGATATTTATCTT-------------------ATACTTT-- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44005862 87 - 53741614 --CTTTTTCTTATCTAAACCTGGAGGGAGATA-AATTCACTCAATCTATAGAAGTTTATTTTGGTACCACATTAGAAATAAATATCTTCT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1688507 70 + 5974691 -------TTTGTTTTAAATTTAGAGGGAAGTA-AATTAATTCAAGCAATAGATATTTATTTCACTCCTACATTAGAGA------------ i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=576835.000000 s hg38.chr9_KI270719v1_random 13869 76 + 176845 CTAAGAAA----AATCCCACTTTACTTAATATGT------ATCACATTTACCTAACAAG--TAACATATTACTAAAA--CAGAGAGCAAC s panTro5.chr4 135041166 75 + 194502333 CTAAGAAA----AATCCCACTTTACTTAATATGT------ATCACA-TTACCTAATAAA--TAACATATTACTAaaa--cagagagcaac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21708 76 - 70559 CTAAGAAA----AATCCCACTTTACTTAATATGT------ATCACATTTACCTAATAAA--TAACATATTACTAAAA--CAGAGAGCAAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435094 75 - 115148730 CTAAGAAA----AATCCCTCTTTACTTAATATGT------ATCACA-TTATCTAATAAA--TAACATATTACTAaaa--cagagaccaac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377098 75 + 190429646 CTAAGAAA----AATCCCACTTAATTTAATTTGT------ATCACA-TTATCTAATAAA--TAACATATTACTAAAA--CAGAGACCAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895784 75 + 189454096 CTAAGAAA----AATCCCACTTAATTTAATTTGT------ATCACA-TTATCTAATAAA--TAACATATTACTAAAA--CAGAGACCAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887038 75 - 40319822 CTAAGAAA----AATCCCACTTAATTTAATTTGT------ATCACA-TTATCTAATAAA--TAACATATTACTAAAA--CAGAGACCAAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441243 75 - 9219162 CTAAGAAA----AATCCCACTTAATTTAATTTGT------ATCACA-TTATCTAATAAA--TAACATATTACTAAAA--CAGAGACGAAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966711 75 + 135778131 CTAAGAAA----AATCCCACTTAATTTAATTTGT------ATCACA-TTATCTAATAAA--TAACATATTACTAAAA--CAGAGACCAAC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964258 75 + 8656713 CTAAGAAA----AATCCCACTTTACTTAATTTGT------ATCACA-TTATCTAATAAA--TAACATATTACTAAAA--TAGAGACCAAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394733 77 - 190850796 CTGAGAAAAA--AAACCTACTTTACTTAATTTTT------ATCACA-TTATTTAATAAA--TAACGTATTACCAAAA--CAGGGACCAAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478481 79 - 25294431 CTGAGAAAAAAGAAATCCACTTTACTTAATTTTT------ATCACA-TTATTTAATAAA--TAACATATTACTAAAA--CAGGGACCAAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034272 77 - 6311556 CTGAGGAAAA--AAACCCACTTTACTTAATTTTT------ATCACA-TTGTTTAATAAA--TAACATGTTACTAAAA--CAGGGACCAAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14885290 76 + 15034901 CTGAGAAAAA--AACCCCACTTTACTT-ATTTTT------ATCACA-TTATTTAATAAA--TAACATATTACTAAAA--CAGTGACCAAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 910433 56 - 3201129 -----------------------ATTTCATTGTT------ATTA---TTATGTAAAAAATTTGACATTATACTAAAG--TAGGGACCAAC i otoGar3.GL873702 C 0 I 6447 s canFam3.chr19 44005949 81 - 53741614 CTGAGAAA----GGCCACCTTCTATTTAATTTTTAAGATAATTACA-TTATCTAAAAGA--TAACAGTAGTGTaaag--aagagaccaac i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1688577 71 + 5974691 CTAGGAAA----CATCACACTAAAATTTAATTGT------G------TTATCTAAAAAA--TAACATa-tactaagaggcagatacagat i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=6802.000000 s hg38.chr9_KI270719v1_random 13945 1 + 176845 C s panTro5.chr4 135041241 1 + 194502333 c i panTro5.chr4 C 0 I 3 s gorGor5.CYUI01001450v1 21784 1 - 70559 C i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435169 1 - 115148730 c i nomLeu3.chr7b C 0 I 3 s rheMac8.chr5 131377173 1 + 190429646 C i rheMac8.chr5 C 0 I 3 s macFas5.chr5 130895859 1 + 189454096 C i macFas5.chr5 C 0 I 3 s macNem1.NW_012010911v1 34887113 1 - 40319822 C i macNem1.NW_012010911v1 C 0 I 3 s cerAty1.NW_012000798v1 4441318 1 - 9219162 C i cerAty1.NW_012000798v1 C 0 I 3 s chlSab2.chr7 78966786 1 + 135778131 G i chlSab2.chr7 C 0 I 3 s colAng1.NW_012114544v1 5964333 1 + 8656713 C i colAng1.NW_012114544v1 C 0 I 3 s calJac3.chr3 129394810 1 - 190850796 C i calJac3.chr3 C 0 I 3 s saiBol1.JH378129 6478560 1 - 25294431 C i saiBol1.JH378129 C 0 I 3 s cebCap1.NW_016107420v1 4034349 1 - 6311556 C i cebCap1.NW_016107420v1 C 0 I 12 s aotNan1.NW_018507635v1 14885366 1 + 15034901 C i aotNan1.NW_018507635v1 C 0 I 3 s canFam3.chr19 44006030 1 - 53741614 t i canFam3.chr19 C 0 I 3 s dasNov3.JH569232 1688648 1 + 5974691 c i dasNov3.JH569232 C 0 I 3 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=76574.000000 s hg38.chr9_KI270719v1_random 13946 9 + 176845 AGTGTTTTA s panTro5.chr4 135041245 9 + 194502333 agtgtttta i panTro5.chr4 I 3 C 0 s gorGor5.CYUI01001450v1 21785 9 - 70559 AGTGTTTTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435173 9 - 115148730 agtgtttta i nomLeu3.chr7b I 3 C 0 s rheMac8.chr5 131377177 9 + 190429646 AGCGTTTTA i rheMac8.chr5 I 3 C 0 s macFas5.chr5 130895863 9 + 189454096 AGCGTTTTA i macFas5.chr5 I 3 C 0 s macNem1.NW_012010911v1 34887117 9 - 40319822 AGCGTTTTA i macNem1.NW_012010911v1 I 3 C 0 s cerAty1.NW_012000798v1 4441322 9 - 9219162 AGCGTTTTA i cerAty1.NW_012000798v1 I 3 C 0 s chlSab2.chr7 78966790 9 + 135778131 AGCGTTTTA i chlSab2.chr7 I 3 C 0 s colAng1.NW_012114544v1 5964337 9 + 8656713 AGCGTTTTA i colAng1.NW_012114544v1 I 3 C 0 s calJac3.chr3 129394814 9 - 190850796 AGTGTTTTA i calJac3.chr3 I 3 C 0 s saiBol1.JH378129 6478564 9 - 25294431 AGTCTTTTA i saiBol1.JH378129 I 3 C 0 s aotNan1.NW_018507635v1 14885370 9 + 15034901 AGTGTTTTA i aotNan1.NW_018507635v1 I 3 C 0 s canFam3.chr19 44006034 9 - 53741614 agtgtttca i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1688652 9 + 5974691 agtgtttta i dasNov3.JH569232 I 3 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e cebCap1.NW_016107420v1 4034350 12 - 6311556 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=248.000000 s hg38.chr9_KI270719v1_random 13955 1 + 176845 -C s panTro5.chr4 135041254 1 + 194502333 -c i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21794 1 - 70559 -C i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435182 1 - 115148730 -c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377186 1 + 190429646 -C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895872 1 + 189454096 -C i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887126 1 - 40319822 -C i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441331 1 - 9219162 -C i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966799 1 + 135778131 -C i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964346 1 + 8656713 -C i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6478573 1 - 25294431 -T i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14885379 1 + 15034901 -C i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44006043 1 - 53741614 -c i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1688661 1 + 5974691 g- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e cebCap1.NW_016107420v1 4034350 12 - 6311556 I e calJac3.chr3 129394823 0 - 190850796 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=7098.000000 s hg38.chr9_KI270719v1_random 13956 1 + 176845 T s panTro5.chr4 135041255 1 + 194502333 t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21795 1 - 70559 T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435183 1 - 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377187 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895873 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887127 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441332 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966800 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964347 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14885380 1 + 15034901 T i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44006044 1 - 53741614 t i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1688662 1 + 5974691 t i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e cebCap1.NW_016107420v1 4034350 12 - 6311556 I e saiBol1.JH378129 6478574 0 - 25294431 C e calJac3.chr3 129394823 0 - 190850796 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=-4601.000000 s hg38.chr9_KI270719v1_random 13957 12 + 176845 C------------ttttttttt--------tc s panTro5.chr4 135041256 12 + 194502333 c------------ttttctttt--------tc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21796 12 - 70559 C------------ttttttttt--------tc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435184 24 - 115148730 cttttttttttttttttttttt--------tc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377188 24 + 190429646 C--------ttttttttttttttttttttccc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895874 24 + 189454096 C--------ttttttttttttttttttttccc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887128 16 - 40319822 C--------ttttttttttttt--------cc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441333 16 - 9219162 C--------tttttttttttcc--------cc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966801 20 + 135778131 C--------ttttttttttttt----ttcccc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964348 19 + 8656713 C--------tttttttgctctt-----ttttg i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44006045 12 - 53741614 ---------actatttatttc----------- i canFam3.chr19 C 0 I 72 s dasNov3.JH569232 1688663 15 + 5974691 -----ctcacttatttttat------------ i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14885381 0 + 15034901 C e cebCap1.NW_016107420v1 4034350 12 - 6311556 I e saiBol1.JH378129 6478574 0 - 25294431 C e calJac3.chr3 129394823 0 - 190850796 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=50914.000000 s hg38.chr9_KI270719v1_random 13969 12 + 176845 agagattttttg s panTro5.chr4 135041268 12 + 194502333 agagattttttg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21808 12 - 70559 agagattttttg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435208 12 - 115148730 agagattttttg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377212 12 + 190429646 ggagattttttg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895898 12 + 189454096 ggagattttttg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887144 12 - 40319822 ggagattttttg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441349 12 - 9219162 agagattttttg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966821 12 + 135778131 agagattttttg i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964367 12 + 8656713 agagattttttg i colAng1.NW_012114544v1 C 0 C 0 s dasNov3.JH569232 1688678 12 + 5974691 ataaatatattg i dasNov3.JH569232 C 0 I 56 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44006057 72 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14885381 0 + 15034901 C e cebCap1.NW_016107420v1 4034350 12 - 6311556 I e saiBol1.JH378129 6478574 0 - 25294431 C e calJac3.chr3 129394823 0 - 190850796 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=1043111.000000 s hg38.chr9_KI270719v1_random 13981 273 + 176845 ctcttgttgcccaagttggagtgcaatggcatgatctcggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctgccaagtagctgggcttacaggcatgcaccaacatgcctggctaatttttgtgttttttttttaatagacacgggatttcaccatgttggtcaggctagtctcgaacacctgacctcaagtgatccacccgcctcggcctcccaaagtgctgggattataggcatgagactttgcgcctggc s panTro5.chr4 135041280 271 + 194502333 ctcttgttgcccaagttggagtgcaatggcatgatcccggctcactgcaacctccacttcccaggttcaagcaattctcctgcctcagcctcccaagtagctgggcttacaggcatgcaccaacatgcctggctaatttttgta--ttttttttagtagacacgggatttcaccatgttggtcaggctagtctcaaacacctgacctcaagtgatccacccgcctcggccttccaaagtgctgggattataggcatgagcctttgcgcccggc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 21820 271 - 70559 ctcttgttgcccaagttggagtgcaatggcatgatcccggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctgccaagcagctgggcttacaggcatgcaccaacatgcctggctaatttttgtg--ttttttttagtagacacgggatttcaccatgttggtcaggctagtctcaaacacctgacctcaagtgatccacccgcctcggcctcccaaagtgctgggattataggcatgagcctttgcgcctggc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435220 271 - 115148730 ctcttgttgcccaagttggagtgcaatggcatgatcccggctcactgcaacctccacctcccgggttcaagcaattctcctgcttcagcctcccaagtagttggacttagaggcatgcaccacaatgcctggctaatttttctt--ttttttttagtagacacgggatttcaccatgttggtcaggctggtcttgaacacctgatctcaagtgatacaccctccttggcctccccaagtgctgggattacaggcatgagccactgcgcctggc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377224 273 + 190429646 ctcttgttgcccaagttggagtgcaatggcatgattccagctcactgcaacctccacctcccaggttcaagcaattctcctgtctcagcctcccaagtagctgggcttacaggcatgcaccaccatgcctggccaatttttgtattttttttttagtagacacgggatttcaccatgttggtcaggttggtctcgaacacctgacctcaagtgatccacctgcctcagcctcccaaagtgctgggattacaggtgtgagccatcatgcccagA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130895910 273 + 189454096 ctcttgttgcccaagttggagtgcaatggcatgattccagctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcccaagtagctgggcttacaggcatgcaccaccatgcctggctaatttttgtattttttttttagtagacacgggatttcaccatgttggtcaggttggtctcgaacacctgacctcaagtgatccacctgcctcagcctcccaaagtgctgggattacaggtgtgagccatcatgcccagA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887156 273 - 40319822 ctcttgttgcccaagttggagtgcaatggcatgattccagctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcccaagtagctgggcttacaggcatgcaccaccatgcctggctaatttttgtattttttttttagtagacacgggatttcaccatgttggtcaggttggtctcgaacacctgacctcaagtgatccacctgcctcagcctcccaaagtgctgggattacaggtgtgagccatcatgcccagA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441361 273 - 9219162 ctcttgttgcccaagttggagtgcaatggcatgattccagctcactgcaacctccacctcccaggttcaagcaattctcccgcctcagcctcccaagtagctgggctcacaggcatgcaccaccatgcctggctaatttttgtattttttttttagtagacacaggatttcaccatgttggtcaggttggtctcgaacacctgacctcaagtgatccacctacctcagcctcccaaagtgctgggattacaggcgtgagccatcatgcccagc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78966833 273 + 135778131 ctcttgttgcccaagttggagtgcaatggcctgattccagctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcccaagtagctgggcttacaggcatgcaccaccatgcctggctaatttttgtattttttttttagtagacacgggatttcaccatgttggtcaggttggtctcgaacgcctgacctcaagtgatccacctgcctcagtctcccaaagtgctgggattacaggcgtgagccatcatgcccagc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964379 273 + 8656713 ctctttttgcccaagttggggtgcaatggcatgattccagcacactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcctaagtagctgggcttacaggcatgcaccaccgtgcctggctaatttttgtatttttcttttagtagacacaggattttaccatgttggtcaggttggtctcgaacacctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcttgagacatcatgtccagc i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688690 56 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44006057 72 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14885381 0 + 15034901 C e cebCap1.NW_016107420v1 4034350 12 - 6311556 I e saiBol1.JH378129 6478574 0 - 25294431 C e calJac3.chr3 129394823 0 - 190850796 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=795.000000 s hg38.chr9_KI270719v1_random 14254 1 + 176845 c s panTro5.chr4 135041551 1 + 194502333 c i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22091 1 - 70559 c i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435491 1 - 115148730 c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377497 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896183 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887429 1 - 40319822 A i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441634 1 - 9219162 c i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967106 1 + 135778131 c i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964652 1 + 8656713 c i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394823 1 - 190850796 C i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4034362 1 - 6311556 C i cebCap1.NW_016107420v1 I 12 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688690 56 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44006057 72 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14885381 0 + 15034901 C e saiBol1.JH378129 6478574 0 - 25294431 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=7098.000000 s hg38.chr9_KI270719v1_random 14255 1 + 176845 T s panTro5.chr4 135041552 1 + 194502333 t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22092 1 - 70559 T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435492 1 - 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377498 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896184 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887430 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441635 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967107 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964653 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394824 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478574 1 - 25294431 T i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034363 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688690 56 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44006057 72 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14885381 0 + 15034901 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=602218.000000 s hg38.chr9_KI270719v1_random 14256 82 + 176845 CATTTATTTTCATATAAAATATAGGGTCAAGTATGTTGAGATATTAATTACGCTATATTTTGCTCAGTATTGCCTGAGAGTT s panTro5.chr4 135041553 82 + 194502333 catttattttcatataaaatatagggtcaagtatgttgagatattagttatgctatattttgctcagtattgcctgagagtt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22093 81 - 70559 CATTTATTTTCATATAAAATATAGGGTCAAGTATGTTGAGATATTAGTTA-GCTATATTTTGCTCAGTATTGCCTGAGAGTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435493 82 - 115148730 cgtttattttcttataaaatatagggtcaagtatgttgagatattagttacactatattttgctcagtattgcctgagagct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377499 82 + 190429646 CATTTATTTTCATGTAAAATACAGGGTCGAGTATGTTGAGATATTAGTTACAGTATATTTTGCTCAGTATTGCTTGAGAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896185 82 + 189454096 CATTTGTTTTCATGTAAAATACAGGGTCGAGTATGTTGAGATATTAGTTACAGTATATTTTGCTCAGTATTGCTTGAGAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887431 82 - 40319822 CATTTATTTTCATGTAAAATACAGGGTTGAGTATGTTGAGATATTAGTTACAGTATATTTTGCTCAGTATTGCTTGAGAGTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441636 82 - 9219162 CATTTATTTTCATGTAAAATACAGGATCGAGTATGTTGAGATATTAGTTACAGTATATTTTGCTCAGTATTGCTTGAGAGTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967108 82 + 135778131 CATTTATTTTCATGTAAAGTACAGGGTCGAGTATGTTGAGATATTAGTTACAGTATATTTTGCTCAGTATTGCTTGAGAGTT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964654 82 + 8656713 CATTTATTTTCATGTAAAATACAGGATCAAGTATGTTGAGATATTAGTTACAGTATATTTTGCTCAGTATTGCCTGAGAGTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394825 82 - 190850796 CATTTATTTTCATGTAATATATAGGGCCAAGTATATTGAGATATTAGTTATACTATATTTTGCTTAGTAGTGCCTGACAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478575 82 - 25294431 CATTTATTTTCATGTAAAATATAGGGTCAAGTATGTTGAGATATTAGTTATACTATATTTTGCTTAGTATTGCCTGACAGTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034364 82 - 6311556 CATTTATTTTCATGTAAAATATAGGGTCAAGTATGTTGAGATATTAGTTATACTATATTTTGCTTAGTATTGCCTGACAGTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14885381 80 + 15034901 CATTTATTTTCATGTAAAATATAGGGTCAAGTATGTTGAGATATTAGT--TACTATATTTTGCTTAGTATTGCCTGACAGTT i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688690 56 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44006057 72 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=338.000000 s hg38.chr9_KI270719v1_random 14338 2 + 176845 GG s colAng1.NW_012114544v1 5964736 2 + 8656713 GA i colAng1.NW_012114544v1 C 0 C 0 s cebCap1.NW_016107420v1 4034446 2 - 6311556 GG i cebCap1.NW_016107420v1 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688690 56 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44006057 72 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14885461 0 + 15034901 C e saiBol1.JH378129 6478657 0 - 25294431 C e calJac3.chr3 129394907 0 - 190850796 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M e chlSab2.chr7 78967190 0 + 135778131 C e cerAty1.NW_012000798v1 4441718 0 - 9219162 C e macNem1.NW_012010911v1 34887513 0 - 40319822 C e macFas5.chr5 130896267 0 + 189454096 C e rheMac8.chr5 131377581 0 + 190429646 C e nomLeu3.chr7b 90435575 0 - 115148730 C e gorGor5.CYUI01001450v1 22174 0 - 70559 C e panTro5.chr4 135041635 0 + 194502333 C a score=546.000000 s hg38.chr9_KI270719v1_random 14340 6 + 176845 ATTATT s cebCap1.NW_016107420v1 4034448 6 - 6311556 ATTATT i cebCap1.NW_016107420v1 C 0 I 28 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688690 56 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44006057 72 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14885461 0 + 15034901 C e saiBol1.JH378129 6478657 0 - 25294431 C e calJac3.chr3 129394907 0 - 190850796 C e colAng1.NW_012114544v1 5964738 0 + 8656713 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M e chlSab2.chr7 78967190 0 + 135778131 C e cerAty1.NW_012000798v1 4441718 0 - 9219162 C e macNem1.NW_012010911v1 34887513 0 - 40319822 C e macFas5.chr5 130896267 0 + 189454096 C e rheMac8.chr5 131377581 0 + 190429646 C e nomLeu3.chr7b 90435575 0 - 115148730 C e gorGor5.CYUI01001450v1 22174 0 - 70559 C e panTro5.chr4 135041635 0 + 194502333 C a score=0.000000 s hg38.chr9_KI270719v1_random 14346 297 + 176845 Attttttttttttttgagacggagtctcgctctgtcgcccaggctggagtacagtggcgggatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggctcccgccactacgcccggctaatttttttgtatttttagtagagacggggtttcaccgttttagccgggatggtctcgatcccctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcc e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688690 56 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e canFam3.chr19 44006057 72 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14885461 0 + 15034901 C e cebCap1.NW_016107420v1 4034454 28 - 6311556 I e saiBol1.JH378129 6478657 0 - 25294431 C e calJac3.chr3 129394907 0 - 190850796 C e colAng1.NW_012114544v1 5964738 0 + 8656713 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M e chlSab2.chr7 78967190 0 + 135778131 C e cerAty1.NW_012000798v1 4441718 0 - 9219162 C e macNem1.NW_012010911v1 34887513 0 - 40319822 C e macFas5.chr5 130896267 0 + 189454096 C e rheMac8.chr5 131377581 0 + 190429646 C e nomLeu3.chr7b 90435575 0 - 115148730 C e gorGor5.CYUI01001450v1 22174 0 - 70559 C e panTro5.chr4 135041635 0 + 194502333 C a score=16497.000000 s hg38.chr9_KI270719v1_random 14643 2 + 176845 GG s panTro5.chr4 135041635 2 + 194502333 gg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22174 2 - 70559 GG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435575 2 - 115148730 gg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377581 2 + 190429646 GG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896267 2 + 189454096 GG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887513 2 - 40319822 GG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441718 2 - 9219162 GG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967190 2 + 135778131 GG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 129394907 2 - 190850796 GG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478657 2 - 25294431 GG i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14885461 2 + 15034901 GG i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44006129 2 - 53741614 ga i canFam3.chr19 I 72 C 0 s dasNov3.JH569232 1688746 2 + 5974691 gg i dasNov3.JH569232 I 56 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e cebCap1.NW_016107420v1 4034454 28 - 6311556 I e colAng1.NW_012114544v1 5964738 0 + 8656713 C e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=231252.000000 s hg38.chr9_KI270719v1_random 14645 34 + 176845 ATTATTTTATCATTGTAGAGAATAGCTTCTAGGT s panTro5.chr4 135041637 34 + 194502333 attattTTATCATTGTAGAGAACAGCTTCTAGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22176 34 - 70559 ATTATTTTATCATTGTAGAGAATAGCTTCTAGAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435577 34 - 115148730 attattTTATCATTGTAGAGAATAGCTTCTAGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377583 34 + 190429646 ATTATTTTATTGTTGTAGAGAATAGCTTCTAGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896269 34 + 189454096 ATTATTTTATTGTTGTAGAGAATAGCTTCTAGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887515 34 - 40319822 ATTATTTTATTGTTGTAGAGAATAGCTTCTAGAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441720 34 - 9219162 ATTATTTTATTGTTGTAGAGAATAGCTTCTAGAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967192 34 + 135778131 ATTATTTTATTGTTGTAGAGAATAGCTTCTAGAT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964738 34 + 8656713 ATTATTTTATTGTTGTAGAGAATAGCTTCTAGAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394909 34 - 190850796 ATTATTTTATCATTACACAGTATAGCTTGCTGAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478659 34 - 25294431 ATTATTTTATCATTACACAGTATAGCTTGTTGAC i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14885463 34 + 15034901 ATTATTTTATCATTACACAGTATAGCTTGTTGAC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44006131 28 - 53741614 attattTTATTTT------GAAAAGCTTTTTGTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1688748 34 + 5974691 cttattttattgtTGCAGAACATAGCTTCTTGTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e cebCap1.NW_016107420v1 4034454 28 - 6311556 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=546950.000000 s hg38.chr9_KI270719v1_random 14679 90 + 176845 TATGAGAATATTAAATAAAATAAACTGGAGAGACTCTCAGCAGCAAACTATGG----------TATGTAAGT-----ATATAGGTAAATATGtatct--------atctatct s panTro5.chr4 135041671 88 + 194502333 TAAGAGAATATTAAATAAAATAAACTGGAGAGACTC--AGCAGCAAACTATGG----------TATGTAAGT-----ACATATGTAAATATGtatct--------atctatct i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22210 89 - 70559 TATGAGAATATTAAATAAAATAAACTGGAGAGACTCTCAGCAGCAAACTAT-G----------TATGTAAGT-----ACATATGTAAATATGtatct--------atctatct i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435611 90 - 115148730 TATGAGAATATTAAATAAGATATACTGGAGAGACTCTCAGCAGCAAACTATGG----------TATGTCAGT-----ATATATGTAAATATGtatct--------atctattt i nomLeu3.chr7b C 0 I 4 s rheMac8.chr5 131377617 85 + 190429646 TATGAGAAAATTAAATAAGATAAACTGGAGAGACACTCAGCAGCAAACT-TGG----------TATGTAAGT-----ATATATGTAAATATGtatct--------atct---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896303 85 + 189454096 TATGAGAAAATTAAATAAGATAAACTGGAGAGACACTCAGCAGCAAACT-TGG----------TATGTAAGT-----ATATATGTAAATATGtatct--------atct---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887549 85 - 40319822 TATGAGAAAATTAAATAAGATAAACTGGAGAGACACTCAGCAGCAAACT-TGG----------TATGTAAGT-----ATATATGTAAATATGtatct--------atct---- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441754 85 - 9219162 TATGAGAAAATTAAATAAGATAAACTGGAGAGACACTCAGCAGCAAACT-TGG----------TATGTAAGT-----ATATATGTAAATATGtatct--------atct---- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967226 85 + 135778131 TATGAGAAAATTAAATAAGATAAACTGGAGAGACATTGAGCAGCAAACT-TGG----------TATGTAAGT-----ATATATGTAAATATGtatct--------atct---- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964772 85 + 8656713 TATGAGAAAATTAAATAAGATAAACTGGAGAGACACTCAGCAGCAAACT-TGG----------TATGTAAGT-----ATATATGTAAATATGtatct--------attt---- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129394943 79 - 190850796 TATGAGAAAATTAAATAAGATAAATTGGAGAGACTGTCAGCAGCAAACTATGG----------T---TAAGT-----ATATATGCAAATACGtatct---------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478693 81 - 25294431 TATGAGAAAATTTAATAAGATAAATTGCAGAGACTGTCAACAGC-AACCATGG----------TATGTAAGT-----ATAAATGCAAAtatgtatct---------------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034482 86 - 6311556 TATGAGAAAATTAAATAAGATAAATTGGAGAGA----CAGCAGCAAACtatgg----------tatgtaagt-----atatatggaaatatgtatctatttatCT-------- i cebCap1.NW_016107420v1 I 28 I 38 s aotNan1.NW_018507635v1 14885497 81 + 15034901 TATGAGAAAATTAAATAAGATAAATTGGAGAGACTGTCAGCAGCAAACTATGG----------TATGTAAGT------TATATGCAAAtatgtatct---------------- i aotNan1.NW_018507635v1 C 0 I 2 s canFam3.chr19 44006159 91 - 53741614 AATAAAGAAATTAAATAAGATAAACTG----GACTTTCAGCAGTGGTCCATGACATCAGtatttatatagatatataatatatattaataaatat------------------ i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1688782 56 + 5974691 AATTAGAAAATTAGGTAAAATAAACTGTAGAGACTTTAAGCAGCAGAGCATGA----------TAT----------------------------------------------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=198168.000000 s hg38.chr9_KI270719v1_random 14769 64 + 176845 atttat-cta--------------tct-----------a---atctagc---ctatcta-----tctatctat--------------cacctatctatccatctatctatctatc s panTro5.chr4 135041759 84 + 194502333 atttat-ctaatctatcctatctatct-----------atctatctatctatctatcta-----tctatctat--------------catctatctatccatctatctatctatc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22299 64 - 70559 atttat-cta--------------tct-----------a---atctatc---ctatcta-----tctatctat--------------catctatctatccatctatctatctatc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435705 61 - 115148730 atttat-cta--------------tct-----------a---atctatc---ttatcta-----tctatctat-----------------ttatccatctatctatctatctatc i nomLeu3.chr7b I 4 C 0 s rheMac8.chr5 131377702 64 + 190429646 atttat-cta--------------tct-----------t---atctatctatctatcta-----tctatctat-----------------ctatctatctatctatcCATCCATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896388 64 + 189454096 atttat-cta--------------tct-----------t---atctatctatctatcta-----tctatctat-----------------ctatctatctatctatctatccatc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887634 64 - 40319822 atttat-cta--------------tct-----------t---atctatctatctatcta-----tctatctat-----------------ctatctatctatctatctatccatc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441839 72 - 9219162 atttat-cta--------------tct---tatctacct---atctatctatctatcta-----tctatctat-----------------ctatctatctatctatctatccatc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967311 64 + 135778131 atttat-cta--------------tct-----------t---atctatctatctatcta-----tctatctat-----------------ctatctatctatctatctatccatc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5964857 76 + 8656713 atctatccta--------------tctatctatctatct---atctatctatctatcta-----tctatctat-----------------ctatctctctatctatctatccatc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129395022 44 - 190850796 atttat-cta--------------tct-----------t---atctgtctgtctgtcta-----tctatatat-----------------ATAAC-------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478774 40 - 25294431 atttat-cta--------------tct-----------t---a----tctgtctgtcta-----tctatatat-----------------ATAAC-------------------- i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14885580 42 + 15034901 --ttat-cta--------------tct-----------t---atctgtctgtctgtcta-----tctatatat-----------------ataac-------------------- i aotNan1.NW_018507635v1 I 2 C 0 s canFam3.chr19 44006250 86 - 53741614 atagat-ata--------------tat-----------t---atatgtaaatatatatacatattatatatatagatataatatataaacatatagatatatatatctatatata i canFam3.chr19 C 0 I 2 s dasNov3.JH569232 1688838 19 + 5974691 CACTAT-CTA--------------TCT-----------A---ATATAG------------------------------------------------------------------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e cebCap1.NW_016107420v1 4034568 38 - 6311556 I e manLeu1.NW_012103277v1 2732612 795 - 3013352 M a score=19063.000000 s hg38.chr9_KI270719v1_random 14833 3 + 176845 tCC s panTro5.chr4 135041843 3 + 194502333 tCC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22363 3 - 70559 tCC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435766 3 - 115148730 tCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377766 3 + 190429646 TCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896452 3 + 189454096 tCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887698 3 - 40319822 tCC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441911 3 - 9219162 tCC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967375 3 + 135778131 tCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2733407 3 - 3013352 TCC i manLeu1.NW_012103277v1 M 795 C 0 s colAng1.NW_012114544v1 5964933 3 + 8656713 tCC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129395066 3 - 190850796 TTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478814 3 - 25294431 TCA i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14885622 3 + 15034901 tCG i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44006338 3 - 53741614 tCC i canFam3.chr19 I 2 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688857 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e cebCap1.NW_016107420v1 4034568 38 - 6311556 I a score=1118279.000000 s hg38.chr9_KI270719v1_random 14836 122 + 176845 TTTTCTTTCATTTATGTCTGGATCTGTACCAAAC----ACcaggcagaggagttaggagaagtaactgaaaa-acccatgggtgacatcaccaactaaaacaggtgacaaataatcagcataaaacc s panTro5.chr4 135041846 122 + 194502333 TTTTCTTTCATTTATGTCTGGATCTGTACCAAAC----GCcaggcagaggagttaggagaagtaattgaaaa-acccatgggtgacatcaccaactaaaacaggtgacaaataatcagcataaaacc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22366 122 - 70559 TTTTCTTTCATTTATGTCTGGATCTGTACCAAAC----ACcaggcagaggagttaggagaagtaactgaaaa-acccatgggtgacatcaccaactaaaacaggtgacaaataatcagcataaaacc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435769 122 - 115148730 TTTTCTTTCATTTATGTCTGGATCTGTACCAAAC----TCCAGGCAGATGAGTTAGGAGAAGTAATGGAAGA-ACCCGTGGGTGACATCACCAACTAAAACAGTTGACAAATAATCAGCATAAAACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377769 121 + 190429646 TTTTCCTTCATTTATGTCTGGATCTGTACCAAAC----ACCAGGCAGTAGAGTTAGGAGAAGTAATGGAAAA-ACCCATGGGTGACATCACCAACTAAAACAG-TGACAAATAATCATCATAAAACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896455 121 + 189454096 TTTTCCTTCATTTATGTCTGGATCTGTACCAAAC----ACCAGGCAGTAGAGTTAGGAGAAGTAATGGAAAA-ACCCATGGGTGACATCACCAACTAAAACAG-TGACAAATAATCATCATAAAACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887701 121 - 40319822 TTTTCCTTCATTTATGTCTGGATCTGTACCAAAC----ACCAGGCAGTAGAGTTAGGAGAAGTAATGGAAAA-ACCCATGGGTGACATCACCAACTAAAACAG-TGACAAATAATCATCATAAAACC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4441914 121 - 9219162 TTTTCCTTCATTTATGTCTGGATCTGTACCAAAC----ACCAGGCAGTAGAGTTAGGAGAAGTAATGGAAAA-ACCCATGGGTGATATCACCAACTAAAACAG-TGACAAATAATCATCATAAAACC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967378 121 + 135778131 TTTTCTTTCATTTATGTCTGGATCTGTACCAAAC----ACCAGGCAGTAGAGTTAGGAGAAGTAATGGAAAA-ACCCATGGGTGACATCACCAACTAAAACAG-CAACAAATAATCATCATAAAACC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2733410 121 - 3013352 TTTTCCTTCATTTATGTCTGGATCTGTACCAAAC----ACCAGGCAGTAGAGTTAGGAGAAGTAATGGAAAA-ACCCATGGGTGACATCACCAACTAAAACAG-TGACAAATAATCATCATAAAACC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5964936 121 + 8656713 TTTTCTTTCATTTATGTCTGGATCTATACCAAAC----ACCAGGCAGAAGAGTTAGGAGAAGTAATGGAAAA-ACCCATGGGTGACATCACCAACTAAAACAG-TGACAAATAATCATCATAAAATC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129395069 123 - 190850796 TTTTCTTTCATTTATGTCTGGATCTCCACCAAAC----ACCAGGCAGAGGAGGTAGAAGAAGTAATGGAAAAAACCCACGGGCGACATCATCAACTAAACCAGGTGACAAATAATCAGCGTAAAACC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478817 123 - 25294431 TTTTCTTTTATTTATGTCTGGATCTCCACTAAAC----ACCAGGCAGAGGAGGTAGGAGAAGTAATGGAAAAAACTCATTGGTGACATCATCAACTAAACCAGGTGACAAATAATCAGCGTAAAACC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4034606 123 - 6311556 TTTTCTTTCATTTATGTCTGGATCTCCACCAAAC----ACCAGGCAGAGGAGGTAGGAGAAGTAATGAAAAAAACCCATGGGTGACATCATCAACTAAACCAGGTGGCAAATAATCAGCATAAAACC i cebCap1.NW_016107420v1 I 38 C 0 s aotNan1.NW_018507635v1 14885625 123 + 15034901 TTTTCTTTCCTTTATGTCTGGATCTCCACCAAAC----ACCAGGCAGAGGAGGCAGGAGAAGTAATGAAAAATACTGATGGGTGACATCATCAACTGAACCAGGTGACAAATAATCAGTGTAAAACC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44006341 121 - 53741614 GTTACTTTAACATGTGCCTGGCTCTCC-CTACACCATGACCATGAAGAGTAGTTAGGAGAGGTGATAGAAAG---CTTTAGGT--TAATGCCTACAAAACCAGAAGACAAGTAATCTGCATAAAATT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1688857 104 + 5974691 ---------------GACAAGATCT---CAAAAC----ACCAAGCAGAATAGTCAGTAGAGGTAATAGAAGA-AACCATCATTGACATCATCAACTAAACCAGGTCACAAAGAATCAAGGCAAAGTC i dasNov3.JH569232 C 0 I 14 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I a score=5120830.000000 s hg38.chr9_KI270719v1_random 14958 614 + 176845 caggatacaagAGTAATTGTCCTAATCATTGGCAGCATAGGGCCAGTACCAGCTGGACTTAATGGCAAAGATAAAATGAAGATAAAAGGAAGTATTGTAAGATCTTAATATCAATAAACTACAACAAGAAATCATCAATAATGCTCACTCCCAAAAGAAAA--ATACTTACCCTGAAGAAAAACAACTGGAACAAAATCAAAATTAATCAGAGAATCAGATAATCTGAGACAAGTAAGATAATTTTTAGAAAATAGTTTTTAG--AAAAAAA-AAATTTGAAGGTACATAAAATCAAATAGAAGTGGTACGAACTATAGTAAGAGATATAGAGTATAAAAATAAGAGTAA------AAAACAGAAATTGAGAGATTAAAAACATCT---AAAAATTTTCTAAACATAGAACT-TAGGCAAAGAATAGTAATACCC-ATGTAACG-GTTATTTCtaagaacaaaaattaaaataaaaa--------ataatattaaTTATTTGAGCATGAAGGT-AAaaggataagaagtttatattgataatagacttcttgatagcaacattttatacaagatgataatcaagaaatggtttaatgattatgaaacagataacacagtagcgagatgagattttattca s panTro5.chr4 135041968 614 + 194502333 cagaatacaagAGTAATTGTCCTAATCATTGGCAGCATAGGGCCAGTACCAGTTGGAGTTAATGGCAAAGATAAAATGAAGATAGAAGGAAGTATTGTAAGATCTTAATATCAATAAACTACAACAAGAAATCATCAATAATGCTCACTCCCAAAAGAAAA--ATACTTACCCTGAAGAAAAACAATTGGAACAAAATCAAAATTAATCAGAGAATAAGATAATCTGAGACAAGTAAGATAATTTTTGGAAAATAATTTTTAG--AAAAAAA-TGATTTGAAGGTACATAAAATCAAATAGAAGTGGTACAAACTATAGTCAGAGATATAGAGTATAAAAATAAGAGTAA------AAAACAGAAATTGAGAGATTAAAAACATCT---AAAAATTTTCTAAACATAGAACT-TAGGCAAAGAATAGTAATACCC-ATGTAATG-GTTATTTCtaagaacaaaaattaaaataaaaa--------ataatattaaTTATTTGAGCATGAAGGT-AAaaggataagaagtttatattgataatagacttcttgatagcaacattttatacaggatgataatcaagaaatggtttaatgattatgaaacagataacacagtagtgagatgagattttattca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 22488 613 - 70559 cagaatacaagAGTAATTGTCCTAATCATTGGCAGCATAGGGCCAGTACCAGCTGGAGTTAATGGCAAAGATAAAATGAAGATAAAAGGAAGTATTGTAAGATCTTAATATCAATAAACTACAACAAGAAATCATCAATAATGCTCACTCCCAAAAGAAAA--ATACTTACCCTGAAGAAAAACAATTGGAACAAAATCAAAATTAATCAGAGAATCAGATAATCTGAGACAAGTAAGATAATTTTTAGAAAATAATTTTTAG--AAAAAAA-TAATTTGAAGGTACATAAAATCAAATAGAAGTGGTACAAACTATAGTAAG-GATATAGAGTATAAAAATAAGAGTAA------AAAACAGAAATTGAGAGATTAAAAACATCT---AAAAATTTTCTAAACATAGAACT-TAGGCAAAGAATAGTAATACCC-ATGTAATG-GTTATTTCTAAGAACAAAAATTAAAATAAAAA--------ATAATATTAATTATTTGAGCATGAAGGT-AAAAGGATAAGAAGTTTATATTGATAATagacttcttgatagcaacattttatacaggatgataatcaagaaatggtttaatgattatgaaacagataacacagtagcgagatgagattttattca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90435891 616 - 115148730 CAGAATGCAAGAGTAATTGTCCTAATCCTAGGCAGCATAGGGCCAGTACCAGCTAGAGTTAATGGCAAAGATAAAATGAAGATAAAAGGAAGTATTGTAAGATCTTACTATCCATAAACCACAATAAGAAATCATCAATAATGCTCTCTCCCAAAAGAAAAAGACACTTACCCTGAAGAAAAACAATTGGAACAAAATCAAAATTAATCAGAGAATCAGATAATCTGAGACAAGGAAGATAATTTTTAGTAAATAATTTTTAG--AAAAAAA-TAATTCGAAGGTTCATAAAATCAAATAGAAGTGGTACAAACTATAGTAAGAGATATAGAGTATAAAAATAAGAGTAA------AAAACAGAAATTGAGAGATTAAAAACATCT---AAAAATTTTCTAAACATAGAACT-TAGGCAAAGAATAGTTATACCC-CTGTAATG-GTTATTTCTAAGAACAaaaattaaaatgaaaa--------ataatataaattaCTTGAGCATGAAGGT-AAaaggataagaagtttatactgataatagacttcttgattgcaacattttatacaggatgataataaagaaatggtttaatgattttgaaacagagaacacagtagcaagatgagattttattca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131377890 613 + 190429646 CAGAATACAAGAGTAATTGCCTTAATCCTTGGCAGCATGGGGCCAGTACCAGCTGGAGTTAATGGCAaagataaaaggaagataaaaggaagTATTGTAAGATCTTGCTATCAATAAACTACAACAAGAAATTATCAATAATTCTCACCTCTAAAAGAAAAAGACACTTACCCTGAAGAAAAACAATTGGAACAAAATAAAAATTAATCAGAGAATCAAATAATCAGAGACAAGAAAGATAATTTTTAGAGAATAATTTTTAGAAAAAAAAA-TAATTTGAAGGTACATAAAATCAAATAGAAGTGGTACGAACTAGGGTAAGAGATATAGAGTATAAAAATAAGAATAT------GAAACAGAAATTGAGAGATTAAAAACATCT---AAAAAATTTCTAAATGTAGAACTTTAGGCAAAGAATAGTAATACCCAATGTACTG-GTTATTTCTAAGAACAAAAATCAAAATAAAAA---------------TAATTATTTGAGCATGCAAGT-AAaaggataagaagtttatattgataatagacttcttgatagcaacattttatacaggatgataataaagaaatggtttaatgattttgaaagagagaacacagtagagagatgagattttattca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130896576 613 + 189454096 CAGAATACAAGAGTAATTGCCCTAATCCTTGGCAGCATGGGGCCAGTACCAGCTGGAGTTAATGGCAaagataaaaggaagataaaaggaagTATTGTAAGATCTTGCTATCAATAAACTACAACAAGAAATTATCAATAATTCTCACCTCTAAAAGAAAAAGACACTTACCCTGAAGAAAAACAATTGGAACAAAATAAAAATTAATCAGAGAATCAAATAATCAGAGACAAGAAAGATAATTTTTAGAGAATAATTTTTAGAAAAAAAAA-TAATTTGAAGGTACATAAAATCAAATAGAAGTGGTACGAACTAGGGTAAGAGATATAGAGTATAAAAATAAGAATAT------GAAACAGAAATTGAGAGATTAAAAACATCT---AAAAAATTTCTAAATGTAGAACTTCAGGCAAAGAATAGTAATACCCAATGTACTG-GTTATTTCTAAGAACAAAAATCAAAATAAAAA---------------TAATTATTTGAGCATGCAAGT-AAAAGGATAAGAAGTTTATATTGATAATAGACTTCTTGATAGCAACATTTTATACAGGATGATAATAAAGAAATGGTTTAATGATTTTGAAAGAGAGAACACAGTAGAGAGATGAGATTTTATTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34887822 613 - 40319822 CAGAATACAAGAGTAATTGTCCTAATCCTTGGCAGCATGGGGCCAGTACCAGCTGGAGTTAATGGCAaagataaaaggaagataaaaggaagTATTGTAAGATCTTGCTATCAATAAACTACAACAAGAAATTATCAATAATTCTCACCTCTAAAAGAAAAAGACACTTACCCTGAAGAAAAACAATTGGAACAAAATAAAAATTAATCAGAGAATCAAATAATCAGAGACAAGAAAGATAATTTTTAGAGAATAATTTTTGGAAAAAAAAA-TAATTTGAAGGTACATAAAATCAAATAGAAGTGGTACGAACTAGGGTAAGAGATATAGAGTATAAAAATAAGAATAT------GAAACAGAAATTGAGAGATTAAAAACATCT---AAAAAATTTCTAAATGTAGAACTTTAGGCAAAGAATAGTAATACCCAATGTACTG-GTTATTTTTAAGAACAAAAATCAAAATCAAAA---------------TAATTATTTGAGCATGCAAGT-AAaaggataagaagtttatattgataatagacttcttgatagcaacattttatacaggatgataataaagaaatggtttaatgattttgaaagagagaacacagtagagagatgagattttattca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4442035 614 - 9219162 CAGAATACAAGAGTAATTGTCCTAATCCTTGGCAGCATGGGGCCAGTACCAGCTGGAGTTAATGGCAaagataaaaggaagataaaaggaagTATTGTAAGATCTTGCTATCAATAAACTACAACAAGAAATTATCAATAATTCTCACCTCTAAAAGAAAAAGACACTTACCCTGAAGAAAAACAATTGGAACAAAATAAAAATTAATCAGAGAATCAGATAATCAGAGACAAGGAAGATAATTTTTAGAGAATAATTTTTAGAAAAAAAAAGTAATTTGAAGGTACATAAAATCAAATAGAAGTGGTACGAACTAGGGTAAGagatatagagtataaaaataagaataa------aaaacagaaATTGAGAGATTAAAAACATCT---AAAAAATCTCTAAATGTAGAACTTTAGGCAAAGAATAGTAATACCCAATGTACTG-GTTATTTCTAAGAACAAAAATCAAAATAAAAA---------------TAATTATTTGAGCATGCAAGT-AAaaggataagaagtttatattgataatagacttcttgatagcaacattttatacaggatgataataaagaaatggtttaatgattttgaaagagagaacacagtagacagatgagattttattca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78967499 613 + 135778131 CAGAATACAAGAGTAATTGTCCTAATCCTTGGCAGCATGGGGCCAGTACCAGCTGGAGTTAATGGCAaagataaaaggaagataaaaggaagTATTTTAAGATCTTGCTATCAATAAACTACAACAAGAAATTATCAATAATTCTCACCTCTAAAAGAAAAAGACACTTACCCTGAAGAAAAACAATTGGAACAAAATAAAAATTAATCAGAGAATCAGATAATCAGAGACAAGGAAGATAATTTTTAGAGAATAATTTTTAGAAAAAAAAA-TAATTTGAAGGTACATAAAATCATATAGAAGTGGTACGAACTAGGGTAAGAGATATAGAGTATAAAAATAAGAATAA------AAAAGAGAAATTGAGAGATTAAAAACATCT---AAAAAATGTCTAAATGTAGAACTTTAGGCAAAGAATAGTAATACCCAATGTACTG-GTTATTTCTAAGAACAAAAATCAAAATAAAAA---------------TAATTATTTGAGCATGCAAGT-AAAAGGATAAGAAGTTTATATTGATAATAGACTTCTTGATAGCAACATTTTATACAGGATGATAATAAAGAAATAGTTTAATGATTTTGAAAGAGAGAACACAGTAGAGAGATGAGATTTTATTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2733531 608 - 3013352 CAGAATACAAGAGTAATTGTCCTAATCTTTGGCAGCATGGGGCCAGTACCAGCTGGAGTTAATGGCAaagataaaaggaagataaaaggaagTATTGTAAGATCTTGCTATCAATAAACTACAACAAGAAATTATCAATAATTCTCACCTCTAAGAGAAAAAGAC----ACCCTGAAGAAAAACAATTGGAACAAAATAAAAATTAATCAGAGAATCAGATAATCAGAGACAAGGAAGATAATTTTTAGAGAATAATTTTTAG-AAAAAAAA-TAATTTGAAGGTACATAAAATCAAATAGAAGTGGTACGAACTAGGGTAAGagatatagagtataaaaataagaataa------aaaacagaaATTGAGAGATTAAAAACATCT---AAAAAATTTCTAAATGTAGAACTGTAGGCAAAGAATAGTAATACCCAATGTACTG-GTTATTTCTAAGGACAAAAATCAAAATAAAAA---------------TAATTATTTGAGCATGCAAGT-AAAAGGATAGGAAGTTTATATTGATAATAGACTTCTTGATAGCAACATTTTATACAGGATGATAATAAAGAAATGGTTTAATGATTTTGAAAGAGAGAACACAGTAGAGAGATGAGATTTTATTCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5965057 617 + 8656713 CAGAATACAAGAGTAATTGTCCTAATCCTTAGCAGCATGGGGCCAGTAGCCGCTAGAGTTAATGGCAAAGATAAAAGGAAGATAAAAGAAAGTATTGTAAGATCTTACTATCAATAAACTACAACAAGAAATTATCAATAATTCTCATCCCCAAAAGAAAAAGACACTTGCCCTGAAGAAAAACAATTAGAACAAAATAAAAATTAATCAGAGAATCAGATAATCAGAGACAAGGAAGATAATTTTTAGAGAATAATTTTTAG--AAAAAAA-TAATTTGAAGGTACATAAAATCAAATAGAAGTGGTACAAACTagagtaagagatacagagcataaaaataagagtaa------AAAACAGAAATTGAGAAATTAAAAACATCT---AAAAAATTTCTAAATGTAGAACTTTAGGCAAAGAATAGTAATACTC-ATGTACTG-GTTATTTCtaagaacaaaaatcaaaataaaaa--------ataagataaaTTATTTGAGTATGCAGGT-AAaaggataagaagtttatgttgataatagacttcttgatagcagcattttatacaggatgataataaagaaagggtttaatgattttgaaagagagaacacagtagagagatgagattttattca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129395192 611 - 190850796 AAGAATACAAGAGTAATTGTCCTAATCCTTGCCAGCATGGGACCAGTACCTTGTGGGGTTAATGGCAAAGATAAAATTGAGATTAAAGGAAGTATTGGAAAATCTTACTATCACTAAACTACAACAAGAAATCATCAATAATACTTACCTCCAAAAGAAAAAGACATT-AACCTGAAGAAAAATAATCAGAACAAAATAAAAATTAACTAGATAATCAGATAATCAGAGACAATAAAGATAATTTTTAGTAAATAAGCTTCAG-AAAAAAAATTAATTTGAAGGTACATAAAATCAAATAGGAATAGTACAAAATATAGTAAGAGATACAGAGTTTAAAAATAAGAGTAG------AAAACAGAAATTGAGAGATTAAAAATATCT---AAAAATTTTCTAAATGCATAACT-TAGGCAAGAAATTGTAATACTC-ATGTAATT-GTTATTTCTGAGAACaataattaaaaataata--------------taaattatttGAGTATGTAAAT-AAAAGGATAAGAAGTTCATGTTGATAATAGATTTCTTGACAGCAACATTTTATAGAGGATGATAATAAAGAAACGTTTTAATGATTATGAAAGAGCAAACACAGTAGCCAGATGAGATTCTATTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6478940 610 - 25294431 AAGAATACAAGAGTAGTTGTCTTAATCCTTGCCAGTGTGGGGCCAGTACCATGTGGGGTTAAGGGCAAAGATAAAATTAAGATCACAGGAAGTATTGGAAGATCTTACTATCACTAAACTACAACAAGAAATCATCAATAATAGTCACCTCCAAAAGAAAAAGACACT-AATCTGAAGAAAAACAATCAGAATAAAATAAAAATTAATCAGAGAATCAGATAATCAGAGATAATAAAGATAATTTTTAGTAAATAAGTTTCAG-AAAAAAAA-TAATTTGAAGGTACATAAAATTAAATAGGAATGGTACAAAATATAGTAAGAGATATAGAGTTTAAAAATAAGAGTAG------AAAACAGAAATTGAGAGATTAAAAACATCT---AAAAATTTTCTAAATACATAACT-TAGGCAAGGAATTGTAATACCC-ATGTAATG-GTTATTTCTAAGAACAATAATTAGAAATAATA--------------TAAATTATTTGAGCATGTAAGT-AAAAGGATAAGAAGTTTATGTTGAGAATAGACTTCTTGACAGCAACATTTTATACAGGATGATAATAAAGAAATGTTTTAATTATTATGAAAGAGCAAACACAGTAGCCAGATGAGATTCCATTTA i saiBol1.JH378129 C 0 M 518 s cebCap1.NW_016107420v1 4034729 608 - 6311556 AAGAATACAAGAGTAGTTGTCCTAATCCTTGCCAGCATGGGGCCAGTACCATGTGGGGTTAAGGGCAAAGATAAAATTAAGATCAAAGGAGGAATTGGAAGATCTTACTATCACGAAACTACAACAAGAAATCATCAATAATACTTAGCTCCAAAAGAAAAAGACACT-AACCTGAAGAAAAACAATCAGAATAAAATAAAAATTAATTAGAGAATCAGATAATCAGAGACAATAAAGATAATTTTTAGTAAATAAGTTTCAG-AAAAAAAT-TAATTTGAAGGTACATAAAATCAAATAGGGATGGTACAAAATATAGTAAGAGATATAGAGTTTAAAAACAAGAGTAT------AAAACAGAAATTGAGAGATTAAAAACATCT---AAAAATTTTCTAAATACATAACT-TATGCAAGGAATTGTAATACCT-ATGTAATG-GTTATTTCTAAGAACAATAATTAAAAATAATA--------------TAAATTATTTGAGCAGGTAAGT-AAaaggataagaagtttatgttgataatagacttcttgacagcaacattttatacaggatgataataaagaaatgttttaatgattatgaaagagcaa--agagtagctagatgagattctattta i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14885748 590 + 15034901 AAGAATACAAGAGTAGTTGTCCTAATCCTTGCCAGCGTGGGGCCAGTACCATGTGGGGTTAAGGGCAAAGATAAAATTAAGATCAAAGGAAGTATTGGAAGATCTTCCT----------------AAGAAATCATCAATAATACCTACCTCCAAAAGAAAAAGATACT-AACCTGAAGAAAAA-AATCAGAACAAAATAAAAATTAACCAGAGAATCAGATAATCAGAGACAATAAAGATAATTTTTAGTAAATAAGTTTCAG-AAAAT----TAATTTGAAGGTATATAAAATCAAATAGGAATGGTCCAAAATATAGTAAGAGATACACAGTTTAAAAATAAGAGTAG------AAAACAGAACTTGAGAGCTTAGAAACATCT---AAAATTTTTCTAAATACATAACT-TAGGCAAGGAATTGTAATACCC-ATGTAATG-GTTATTTCTAAGAACAATAATTAAAAATAATA--------------TAAATTATTTgagcatgtaagt-aaaaggataagaagtttatgttgataatagacttcttgacagcaacattttgtacaggatgataataaagaaatgttttaatgattatgaaagagcaaacacagtagccagatgagattctattta i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44006462 566 - 53741614 CAGACTACAAAAGTAATTAGGCAAATCCTTAGTAGCATGGA---ATAACAGGGTAAGGTGAATGGTGAAGTTAATGCAAAGATGAAAGGAAGTGTTAAAATATCCTACAATCAATAGACTACATGCAGAAATTACCAACAATTATTCACACTGA-AGAAAATGACATCTATTCTGA--TAAAATTTTGAGAACAAA---AAAAATAATCAG--------------------------------------------GTTATTAT-GATAAAAA------------TCCATAAAGTAAAATAGAAATGATACAATATATAATAAGAGAGATAGAGGAGAAAGATAAGAGTGAAAATGTAAATCAGAAATAGA-----TGAAAATATTTGAGAAGAACATTCTAAATATAGGACT-TAGGCAAAGGAGAACAACACAT-ATGTAGTGAGTTCTTTCTGAAGAAGAAAATTGAGATAAAAAATAAAAAGATAATATAAATTGTTTAAACTCATGAGTAAAaaaggtaagaaatttatattggcaacagaattcttgggagcaacactttatagaggaaggtaatgaggaattgttttagttattgtgaaaggaaaaacatggtagccaaatgatattttatta- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I a score=1256066.000000 s hg38.chr9_KI270719v1_random 15572 181 + 176845 accaaactatgaatcatgtctaaggaatgtagaacatcatgaatattta-----tgattttaagaaacattgttcctgtgatggctttttt--agaaatgtcctacctactgacaagaagacaaacatcatgtgaagcttctggataaggactaaatatgtttaattttataattaagaacaagtaat s panTro5.chr4 135042582 181 + 194502333 tccaaactatgaatcatgtctaaggaatgtagaacatcatgaatattta-----cgattttaaaaaacattgttcctgcgatggctttttt--agaaatgtcctacttactgacagtaagacaaacatcatgtgaagcttctggataaggaataaatatgtttaattttataattaagaacaagtaat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 23101 180 - 70559 tccaaactatgaatcatgtctaaggaatgtagaacatcatgaatattta-----tgattttaaaaaacattgttcctgtgatggctttttt--agaaatgtcctacctactgacaagaagacaaacatcatgtgaagcttctggataa-gactaaatatgtttaattttataattaagaacaagtaat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90436507 179 - 115148730 tccaaaccatgaatcatgtctaaggaatgtagaacatcatgaacattta-----tggttttaaaaa--agtgttcctatgatcactttttt--agaaatgtcctaCTTACTGACAATAAGACAAACATCACGTGAAGCTTCTGGATAAGGATTAAGtatgtttaattttatcattaagaacaagtaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131378503 183 + 190429646 tccaaactATAAGTCTTGTCTAAGGAATGCAGAACATCATGAACATTTATGATTTGATTTTAAAAAACATTATTCTTATTATTGCTTTTTA--AGAAATGACCTACTTACTGAC---AAGACAAACAACACGTGACGCTTCTGGATAAGGATTACATGTGTTTAATTTTATAATTAAGAACAAGTAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130897189 183 + 189454096 TCCAAACTATAAGTCTTGTCTAAGGAATGCAGAACATCATGAACATTTATGATTTGATTTTAAAAAACATTATTCTTATTATTGCTTTTTA--AGAAATGACCTACTTACTGAC---AAGACAAACAACACGTGACGCTTCTGGATAAGGATTACATGTGTTTAATTTTATAATTAAGAACAAGTAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34888435 183 - 40319822 tccaaactATAAGTCTTGTCTAAGGAATGCAGAACATCATGAACATTTATGATTTGATTTTAAAAAACATTATTCTTATTATTGCTTTTTA--AGAAATGACCTACTTACTGAC---AAGACAAACAACACGTGACGCTTCTGGATAAGGATTACATGTGTTTAATTTTATAATTAAGAACAAGTAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4442649 183 - 9219162 tccaaactataagtcttgtctaaggaatgcagaacatcatgaacatttatgatttgattttaagaaacattgttcttattattgcttttta--aggaatgacctactTACTGAC---AAGACAAACAACACGTGACGCTTCTGGATAAGGATTACATGTGTTTAATTTTATAATTAAGAACAAGTAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78968112 183 + 135778131 TCCAAACTATAAGTCTTGTCTAAGGAATGCAGAACATCATGAACATTTATGATTTGATTTTAAAAAACATTTTTCCTATTATTGCTTTTTA--AGAAATGACCTACTTGCTGAC---AAGACAAACAACACGTGAAGCTTCTGGATAAGGATTACATGTGTTTAATTTTATAATTAAGAACAAGTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2734139 183 - 3013352 TCCAAACTATAAGTCTTGTCAAAGGAATGCAGAACATCATGAACATTTATGATTTGATTTTAAAAAACATTGTTCTTATTATTGCTTTTTA--AGAAATGACCTACTTACTGAC---AAGACAAACAACACGTGACGCTTCTGGATAAGGATTACATGTGTTTAATTTTATAATTAAGAACAAGTAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5965674 178 + 8656713 tccaaactataagtcatgtctaaggaatgcagaacatcatgaacattta-----tgattttaaaaaacattgttcctaatattgcttttta--agaaatgacctactCACTGAC---AAGACAAACAACACGTGAAGCTTCTGGATGAGGATTATATGTGTTTAATTTTATAATTAAGAACAAGTAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129395803 181 - 190850796 TCTGTACTATGCATCACATCTAAGGAATGAAGAACATCATAAACATTTA-----TTATTTTTGAAAACATTGTTCTTATGATCTTTTTTTT--AGAAATGTCCTATTTACTGACAATAAGACaaacatcaggtgaagcttctggataagcgttaaatatgtttaattttataattaagaacaagtaat i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4035337 183 - 6311556 tctgtactatgcatcatgtctaaggaatgccgaacatcataaacattta-----tgatttttaaaaacattgttcttatgatccttttttttaagaaatgtcctacttactgacaataagacaaacatcaggtgaagcttctggataagcattaaatatgtttaattttataattaagaacaagtaat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14886338 181 + 15034901 tctgtactatgcatcacatctaaggaatgcagaacatcataaacattta-----tggtttttaaaaacattgttcttatgatctttttttt--agaaatgtcctacttactgacaataagacaaacatcaggtgaagcttctggataagcattaaatatgtttaattttataattaagaacaagtaat i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44007028 160 - 53741614 ttcaaattgtgcatcatgtctaaggaacacagagcaacatgggcatctg----gagactttggaaa----------tatGATCAGTTTATT--AGAGAGCTCTTAGTTACGGAC----------ACAACAAATAAAAGTTC-AGACAAACACAAAATATA-TTAAATTCAGAATTAAGACTAAGTAGT i canFam3.chr19 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 191550 8216 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e saiBol1.JH378129 6479550 518 - 25294431 M a score=12000.000000 s hg38.chr9_KI270719v1_random 15753 1 + 176845 g s panTro5.chr4 135042763 1 + 194502333 g i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 23281 1 - 70559 g i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90436686 1 - 115148730 g i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131378686 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130897372 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34888618 1 - 40319822 G i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4442832 1 - 9219162 G i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78968295 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2734322 1 - 3013352 G i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5965852 1 + 8656713 G i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129395984 1 - 190850796 g i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4035520 1 - 6311556 g i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14886519 1 + 15034901 g i aotNan1.NW_018507635v1 C 0 C 0 s tarSyr2.KE944182v1 199766 1 - 1108378 g i tarSyr2.KE944182v1 I 8216 I 777 s canFam3.chr19 44007188 1 - 53741614 G i canFam3.chr19 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e otoGar3.GL873702 910489 6447 - 3201129 I e saiBol1.JH378129 6479550 518 - 25294431 M a score=913111.000000 s hg38.chr9_KI270719v1_random 15754 157 + 176845 gggattaaagtgacaaaacatgatgctattaagtgtgttaaacatgaagaaataatgcaactcaacaacaaatgg-aaaaaaggagaagaaaaagaaagtagacgaatcttaatgactatctcaggagtatctaactgccattaaaaaaatatggaat s panTro5.chr4 135042764 157 + 194502333 gggattaaagtgacaaaacatgatgctattaagtgtgttaaccatgaagaaataatgcaactcaacaacaaacag-aaaaaaggagaagaaaaagaaagtagacgaatcttaatgactatctcaggagtatctaactgccattaaaaaaatatggaac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 23282 156 - 70559 gggattaaagtgacaaaacatgatgctattaagtgtgttaaacatgaagaaataatgcaactcaacaacaaacag-aaaaaa-gagaagaaaaagaaagtagacgaatcttaatgactatctcaggagtatctaactgccattaaaaaaatatggaat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90436687 156 - 115148730 gtgattaaagtgacaaaacatgatgctattaagtgtgttaaacatgaagaaataatgcaactcaacaataaatag-aaaaaaggagaagaaaaataaagtagacaaatcttaatgattatctcaggagtatctaacttccatt-aaaaaatatcgaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131378687 128 + 190429646 GAGATTAAAGTGACAAAACATGATGCTATTAAGTGTGTTAAACATGAAGAAATA------------------------------AGAAGAAAAAGaaagtagatgaatcttaatgaatgtctcaggagtatctaactgccactaaagatatatcaaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130897373 128 + 189454096 GAGATTAAAGTGACAAAACATGATGCTATTAAGTGTGTTAAACATGAAGAAATA------------------------------AGAAGAAAAAGaaagtagatgaatcttaatgaatgtctcaggagtatctaactgccactaaagatatatcaaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34888619 128 - 40319822 GAGATTAAAGTGACAAAACATGATGCTATTAAGTGTGTTAAACATGAAGAAATA------------------------------AGAAGAAAAAGaaagtagatgaatcttaatgaatatctcaggagtatctaactgccactaaatatatatcaaat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4442833 128 - 9219162 GAGATTAAAGTGACAAAACATGATGCTATTAAGTGTGTTAAACATGAAGAAATA------------------------------AGAAGAAAAAGaaagtagatgaatcttaatgaatatctcaggagtatttaactgccactaaagatacatcaaat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78968296 128 + 135778131 GAGATTAAAGTGACAAAACATGATGCTATTAAGTGTGTTAAACATGAAGAAATA------------------------------AGAAGAAAAAGaaagtagatgaatcttaatgaatatctcaggagtatctaactgccactaaagatatatcaaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2734323 128 - 3013352 GAGATTAACGTGACAAAACATGATGCTATTAAGTGTGTTAAACATGAAGAAATA------------------------------AGAAGAAAAAGaaagtagatgaatcttaatgaatatctcaggagtatctaactgccactaaagatatatcaaat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5965853 128 + 8656713 GAGATTAAAGTGACAAAACATGATGCTATTAAACGTGTTAAACATGAAGAAATA------------------------------agaataaaaagaaagtagatgaatcctaatgaatatctcgggaatatctaacttccactaaagatatatcaaat i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129395985 150 - 190850796 gggattaaagtgacaaaatatgatgctgttagatatgttaaacatg-----ataatgcaactcaacaacaaacag-aaaaaaggagaagataaagaaagtagaagaatcttaatgaATATCTCAGAAATATCTAACTTTCATT--AAAAAAATCAAAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4035521 156 - 6311556 gggattaaagtgacaaaacatgatgctgttcggtgtgttaaacatgaagaaataatgcaactcaacaagaaacagaaaaaaaggagaagataaagaaagtagaagaatcttcatgaacatctcaggaatatctaactttcatt--taaaaaatcaaat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14886520 155 + 15034901 gggattaaagtgacaaaacatgatgctcttcggtgtgttaaacatgaagaaataatgcaacccaacaagaaacag-aaaaaaggagaagat-aagaaaatagaagaatcttaatgaatatctcaggaatatctaactttcatt-aaaaaaaatcaaat i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44007189 146 - 53741614 -GGGATAAAGTAACAAAA-ATTATGCTATTAAATGTACTAAAACTGTAGAAATAATAGAAGTC-ACAACAAACTG---------AAGAGGGGAAGGTAGTGAAATAACAATAATGAATGTTTCAGCGGTATCTAACTACCATTGAAAGGATAGTGAAT i canFam3.chr19 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 199767 777 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e saiBol1.JH378129 6479550 518 - 25294431 M a score=757247.000000 s hg38.chr9_KI270719v1_random 15911 118 + 176845 taaagtaaatgttaagcaaaaagagagaagaaagg-aaagaaagtttactagaatacagtattactactcattgaagaaatcaatagacagtattcaaacacactagag-----gactagtata s panTro5.chr4 135042921 116 + 194502333 taaagtaaatgttaagcaaaaagagagaagaaagg-aaag--agtttactagagaacagtattactactcattgaagaaatcaataggcagtattaaaacacactagag-----gactagtata i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 23438 115 - 70559 taaagtaaatgttaagcaaaaagagagaagaaagg-aaagagagtttactagagaacagtattactactcattgaagaaatcaatag---gtattaaaacacactagag-----gactagtata i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90436843 113 - 115148730 taaagtaaatgttaagcaaaaagagagaagaaaga-g-----agtttacttgagaacagtattattactcattgaagaaatcaacagacagtattaaaacacactagag-----gactaatata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131378815 118 + 190429646 taaagtaaatgttaagcaaaaagagagaagaaagg-aaagagagtttactagaaaacagtattattactcattgaagaaatcaatagacagtattaaaatacaatggga-----aactcgtgtg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130897501 118 + 189454096 taaagtaaatgttaagcaaaaagagagaagaaagg-aaagagagtttactagaaaacagtattattactcattgaagaaatcaatagacagtattaaaatacaatggga-----aactcgtgtg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34888747 118 - 40319822 taaagtaaatgttaagcaaaaagagagaagaaagg-aaagagagtttactagagaacagtattattactcattgaagaaatcaatagacagtattaaaatacaatggga-----aactcgtgtg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4442961 118 - 9219162 taaagtaaatgttaagcaaaaagagagaagaaagg-aaagagagtttactagagaacagtattattactcattgaagaaatcaatagacaatattaaaatacactggga-----aactcgtgta i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78968424 118 + 135778131 taaagtaaatgttaagcaaaaagagagaagaaagg-aaagagagtttactagagaacagtattattactcattgaagaaatcaatagatagtattaaaatacactggga-----aactcgtgta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2734451 118 - 3013352 taaagtaaatgttaagcaaaaagagagaagaaagg-aaagagagtttactagagaacagtattattactcattgaagaaatcaatagacaatattaaaatacactggga-----aactcgtgta i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5965981 118 + 8656713 taaagtaaatgttaagcaaaaagagaaaagaaagg-aaagagagtttactagagaacagcattattaatcattgaagaaatcaatagacagtattaaaatacactggaa-----aactcatgta i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129396135 105 - 190850796 AAAAGCAAATGCTAAGTCAAAAGAGAGAAGAAAGA--------GTTTACTAGAG------ATTATTACTAATTGAAGAAAACAAAAGACAATATTAAAATACACTAAAA-----GACTAGTGta i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4035677 112 - 6311556 aaaagcaaacactaagcaaaaagagagaagaaagg-aaa---tgtttactagagaa---tattattactcattgacgaaatcaatagacagtattaaaatacactaaag-----ggctagtgta i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14886675 121 + 15034901 aaaagcaaatgctaagcaaaaagggagaagaaaggaaaa---agtttactagagaagattattattaatcattgaagaaatcaatagacagtattaaaatacactaaaggactagactagagta i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 199767 777 - 1108378 I e canFam3.chr19 44007335 0 - 53741614 C e otoGar3.GL873702 910489 6447 - 3201129 I e saiBol1.JH378129 6479550 518 - 25294431 M a score=556194.000000 s hg38.chr9_KI270719v1_random 16029 85 + 176845 ttttattataatattattataagataataataagaataaacatagaaacatttata---aataccaaatgagtatatcctgcccctca s panTro5.chr4 135043037 85 + 194502333 ttttattataatattattataagataataatacgaataaacatggaaacatttata---aataccaaatgagtacatcctgcccctta i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 23553 82 - 70559 ttttattataatattattataagataataa---gaataaacatagaaacatttata---aataccaaatgagtatatcctgcccctca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90436956 80 - 115148730 ttttattataatattat-----gagaataataagaataaacatagaaacatttata---aataccaaatgagtatattctgcccctca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131378933 82 + 190429646 ttttatt---atcttagtataagataataataagaataatcatagaaaaatttata---aatactaaatgagtatatcctgcccctca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130897619 82 + 189454096 ttttatt---atcttagtataagataataataagaataatcatagaaaaatttata---aatactaaatgagtatatcctgcccctca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34888865 82 - 40319822 ttttatt---atcttagtataagataataataagaataatcatagaaaaatttata---aatattaaatgagtatatcctgcccctca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4443079 82 - 9219162 ttttatt---atcttagtataagataataataagaataatcatagaaaaatttata---aatactaaatgagtatatcctgcccctca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78968542 76 + 135778131 ttttatt---atattagtataag------ataagaataatcatagaaaaatttata---aatactaaatgagtatatcctgcccctca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2734569 82 - 3013352 ttttatt---atcttagtataagataataataagaataatcatagaaaaatttatc---aatactaaatgagtatatcctgcccctca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5966099 82 + 8656713 ttttatt---atattagtataagataataataagaataatcatagaaacatttata---aatactaaatgagtatatcctgcctctca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129396240 88 - 190850796 ttttattataatattattgtaagataataataagaataaataCAGAAACATTTATATGTTATACCAAATGATTATATCATCCCTTTCA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4035789 85 - 6311556 ttttattataatattattgtgagataataacaagaataaatacagaaacatttata---aataccaaatgaatatatcctccctctca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14886796 84 + 15034901 ttttattataatattattgtaagataataataagaataaatacagaaacatttata----ataccaaatgaatatatcctccctctca i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44007335 76 - 53741614 ATTTATTATGAGGCTA-TGTAAGATAATGGCAAGAGTAGACATAAAAACACTCATA---AATACCAAACAAAT--------CCCATCA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 199767 777 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e saiBol1.JH378129 6479550 518 - 25294431 M a score=408482.000000 s hg38.chr9_KI270719v1_random 16114 51 + 176845 aattaaagtgtaaatac-agggcaagat--------tttatataaattatttatatagca s panTro5.chr4 135043122 51 + 194502333 aattaaagtgtcaatac-agggcaagat--------tttatataaattatttatatagca i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 0 50 + 11745 AATTAAAGTGTAAATAC-AGGGCAAGA---------TTTatataaattatttatatagca i panPan2.chrUn_NW_014014795v1 N 0 C 0 s gorGor5.CYUI01001450v1 23635 51 - 70559 aattaaagtgtaaatac-agggcaagat--------tttatataaattatttatatagca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90437036 51 - 115148730 aattaaagtgtaaatac-agggcaagat--------tttatataaattgtttatatagca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131379015 50 + 190429646 aattaaagtgcaaatac-a-ggcaagat--------tttatataaattgtttatatagca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130897701 50 + 189454096 aattaaagtgcaaatac-a-ggcaagat--------tttatataaattgtttatatagca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34888947 50 - 40319822 aattaaagtgcaaatac-a-ggcaagat--------tttatataaattgtttatatagca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4443161 50 - 9219162 aattaaagtgcaaatac-a-ggcaagat--------tttatataaatcgtttatatagca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78968618 50 + 135778131 aattaaagtgcaaatac-a-ggcaagat--------tttatataaattgtttatatagca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2734651 50 - 3013352 aattaaagtgcaaatac-a-ggcaagat--------tttatataaattgtttatatagca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5966181 50 + 8656713 aattaaagtgtaaatac-a-ggcaagat--------tttatataaattgtttatatagca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129396328 51 - 190850796 AATAAAAGTGTAACTAC-AGGGCAAGAT--------TTTATATAAATCATTTAAATAGCA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4035874 52 - 6311556 aataaaagcgtaactacgggggcaagat--------tttatataaatcatttaaatagca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14886880 51 + 15034901 aataaaaatgtaactac-aggacaagat--------tttatataaatcatttaaatagca i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44007411 55 - 53741614 ----AAAAGTTTAATAC-AGTGTAAGGTTATATCTCTATATAGATATACCTTATGTAGta i canFam3.chr19 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 199767 777 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e saiBol1.JH378129 6479550 518 - 25294431 M a score=4147341.000000 s hg38.chr9_KI270719v1_random 16165 390 + 176845 -aaaacttatataacagaacttaacaccagcata--------acaggtatatcaaagacacaaatgggcttaactcaccattaaatggcatacttttagattggctaatggagcagaatc-------------------caatctattctgtgtgcaagaaacata-ttgaacaaggcaattcagaatggtttaatgtaaaaggaagagcaaagatagatcttgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaagacaaaataaatttaacaggataaggaagggaaatttattctacagaaggattcatgcttcattctacattaaaaataaaatatatattaataacatacacaaaattacaattttcataaagca---------------gaaAGAAGAA s panTro5.chr4 135043173 405 + 194502333 -aaagcttatataacagaacttaacaccagcata--------acaagtatatcaaagacacaaatgggcttaactcaccattaaatggtgtacttttagattggttaatggagcagaatc-------------------caatctattctgtgtaaaagaaacgta-ttgaacaaggcaattcagaatggtttaatgtaaaaagaagagcaaagatagatcttgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaagacaaaataaatttaacaggataaggaagggaaatttattctacagaaggcttcatgcttcattctacattaaaaataaaatatatattaataacatgcacaaaattacaattttcataaagcagaaataacagaagttgaaagaagaa i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 50 404 + 11745 -aaaaattatataacagaacttaacaccagcata--------acaggtatatcaaagacacaaatgggcttaactcaccattaaatggcatacttttagattggctaatggagcagaatc-------------------caatctattctgtgtgcaagaaacata-ttgaacaaggcaattcagaatggtttaatgtaaaaggaagagcaaagacagatcttgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaacttaagacaaaataaatataacaggataaggaagggaaatttattctacagaaggattcatgcttcattctac-ttaaaaataaaatatatattaataacatgcacaaaattacaattttcataaagcagaaataacagaagttgaaagaagaa i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 23686 405 - 70559 -aaaacttatataacagaacttaacaccagcata--------acaggtatatcaaagacacaaatgggcttaactcaccattaaatggcgtacttttagattggctaatggagcagaatc-------------------caatctattctgtgtgcaagaaacata-ttgaacaaggcaattcagaatggtttaatgtaaaaggaagagcaaagatagatcttgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaagacaaaataaatttaacaggataaggaagggaaatttattctacagaaggattcatgcttcattctacattaaaaataaaatatatattaataacatacacaaaattacaattttcataaagcagaaataacagaagttgaaagaagaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90437087 405 - 115148730 -aaaacttatataacagaacttaacaccagcata--------acaggtatatcaaagacacaaatgggcttaactcaccattaaatggcatatttttagattggctaatggagcagaatc-------------------caatctattctgtgtgcaagaaacata-ttgaacaaggcaattcagaatggtttaatgtaaaaagaagagcaaagatagatcttgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaagacaaaataaatttaacaggataaggaagggaaatttattctacagaagggttcatgcttcattctacattaaaaataaaatatatgttaataacatgcaccaaattacaattctcataaagcagaaataacagaagttgaaagaagaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131379065 405 + 190429646 -aaaacttagataacaaaatttaacaccggcata--------ataggtatatcaaagacacaaatgggcttaactcacctttaaatggagtatttttagattggctaatgaaacagaatc-------------------caatctattctgtgtgcaagaagcaca-ctaaacaaggcaattcaaaatggtttaatgtaaaaagaagagcaaagatagatctcgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaggacaaaataaatttaacaggataaggaagggaaatttattctacagaaggcttcatgcttcattctacattaaaaataaaatatacattaataacatggttcaaattataattttcataaagcagaaataacagaagttgaaagaagaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130897751 405 + 189454096 -aaaacttagataacaaaatttaacaccggcata--------ataggtatatcaaagacacaaatgggcttaactcacctttaaatggagtatttttagattggctaatgaaacagaatc-------------------caatctattctgtgtgcaagaagcaca-ctaaacaaggcaattcaaaatggtttaatgtaaaaagaagagcaaagatagatctcgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaggacaaaataaatttaacaggataaggaagggaaatttattctacagaaggcttcatgcttcattctacattaaaaataaaatatacattaataacatggttcaaattataattttcataaagcagaaataacagaagttgaaagaagaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34888997 405 - 40319822 -aaaacttagataacaaaatttaacaccggcata--------ataggtatatcaaagacacaaatgggcttaactcacctttaaatggagtatttttagattggctaatgaaacagaatc-------------------caatctattctgtgtgcaagaagcaca-ctaaacaaggcaattcaaaatggtttaatgtaaaaagaagagcaaagatagatctcgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaggacaaaataaatttaacaggataaggaagggaaatttattctacagaaggcttcatgcttcattctacattaaaaataaaatatacattaataacatggttcaaattataattttcataaagcagaaataacagaagttgaaagaagaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4443211 405 - 9219162 -agaacttagataataaaatttaacactggcata--------ataggtatatcaaagacacaaatgggcttaactcacctttaaatggagtatttttagattggctaatgaaacagaatc-------------------caatctattctgtgtgcaagaaacaca-ctaaacaaggcaattcaaaatggtttaatgtaaaaagaagagcaaagatagatctcatatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaggacaaaataaatttaacaggataaggaagggaaatttattctacagaaggcttcatgcttcattctacattaaaaataaaatatacattaataacatggttcaaattataattttcataaagcagaaataacagaagttgaaagaagaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78968668 405 + 135778131 -aaaacttagataacaaaatttaacaccggcata--------ataggtatatcaaagacacaaatgggcttaactcaccattaaatggagtatttttagattggctaatgaaacagaatc-------------------caatctattctgtgtgcaagaaacaca-ctaaacaaggcaattcaaaatggtttaatgtaaaaagaagagcaaagatagatctcgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaggacaaaataaatgtaacaggataaggaagggaaatttattctacagaaggcttcatgcttcattctacattaaaaataaaatatactttaataacatggttcaaattataattttcataaagcagaaataacagaagttgaaagaagaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2734701 405 - 3013352 -aaaacttagataacaaaatttaacactggcata--------ataggtatatcaaagacacaaatgggcttaactcaccattaaatggagtatttttagattggctaatgaaacagaatc-------------------caatctattctgtgtgcaagaaacaca-ctaaacaaggcaattcaaaatggtttaatgtaaaaagaagagcaaagatagatctcgtatgatagcaagatcctgaaatagttgtcagaattttgctatgagacaagatagaatttaggacaaaataaatttaacaggataaggaagggaaatttattctacagaaggcttcatgcttcattctacattaaaaataaaatatacattaataacatggttcaaattataattttcataaagcagaaataacagaagttgaaagaagaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5966231 405 + 8656713 -aaaacttagataacaaaatttaacatcggcata--------ataggtatatcaaagacacaaatgggcttaactcaccattaaatggagtatttttacactggctaatggagcagaatc-------------------caatctattctgtgtgcaagaaacaca-ctaaacaaggcaattcaaaatggtttaatgtaaaaagaagagcaaagatagatcttgtatgatagcaagatcctgaaatagttgttagaattttgctatgagacaagatagaatttaggacaaaataaatttaacaggataaggaagggaaatttattctacagaaggcttcatgcttcattctacattaaaaataaaatatacattaataacatggttcaaactacaattttcataaagcagaaataacagaagttgaaagaagaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129396379 390 - 190850796 -Aaaaattatataacagcacttaacactagaata--------atcggtatatcaaaaacacaaatggacttaattcaccattaa-------atttttaaatcggctaatggagcagaatc-------------------caatctattctctatgcaagaaacata-ctaaatgaagcaattcagaatgatttaatgtaaaaa-aagatcaaagatagatcttgtatgatagcaagatcctgaaatagttgtcagaattctgctatgagacaacataaaatttagaacaaaataaatataacaggataaggaaggAAAATTTATTCTACAGAAGGCTTCATGCTTCATTCTACATTATAAATAAAATAGATGTTAATAACATGGACCAAGTTATAATTTTCATAAAGCAGAAAT-----AAATTGAAAGAAG-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6480073 395 - 25294431 -AAAACTTAGataacagcacttaacactagtata--------gtaggtatatc-aaaacacaaatgggcttaattcactattaaatgaagtatttttagatcggctaatggagcagaatc-------------------caatcttttctctgtgcaagaaacata-ataaacaaagcaattcagaatggtttaatgtaaaaagaagatcaaag--agatcttgtatgatagcaagatcctgaaatagttgtcgggattttgctatgagacaacatagaatttaggacaaaataaatataacaggataaggaaggAAAATTTATTCTACAGAAGGCGTCATGCTTCATTCTACATTATAAATAAAATAGATATTAATAACATGAACCAAGTTATAACTTTCATAAAGCAGAAAT-----AAGTTGAAAGAAG-- i saiBol1.JH378129 M 518 C 0 s cebCap1.NW_016107420v1 4035926 417 - 6311556 -aaaacttatataacagcacttaacacaagcata--------ataaatatatcaaagacacaaatgagcttaattcaccattaaatgaagtatttttagatcggctaatggagcagaatctattctctcaatctattctcaatctattctctgtgcaaggaacata-ctaaacaaagcaattcagaatggtttaatgtaaaaagaagatcaaagatagatcttgtatgatagcaagatcctgaaatagttgtcagaattttgctatgtgacaagatagaatttaggacaaaataaatataacaggataaggaaggaaaatttattctacagaaggcttcatgcttcattctacattataaataaaatagatattaataacatgaaccaagttatagttttcataaagcagaaAT-----AAGTTGAAAGAAG-- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14886931 398 + 15034901 -aaaacttatataacagcacttaacactagcata--------ataagtatatcaaagacacaaatgagcttaattcaccattaaatgaagtatttttagatcagctaatggagcagaatc-------------------caatctattctctgtgcaagaaacata-ctaaacaaagcaattcagaatggtttaatgtaaaaagaagatcaaagatagatcttgtatgatagcaagatcctgaaatagttgtcagaatttcgctatgagacaacatagaatttaggacaaaataaatataacaggataaggaaggAAAATTTATTCTACAGAAGGCTTCCTGCTTCATTCTACATTATAAATAAAATAGATATTAATAACATGAACCAAGTTATAATTTTCATAAAGCAGAAAT-----AAGTTGAAAGAAG-- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44007466 390 - 53741614 aaaaa---ataggagagaactgaaaaccactatatcaaagatatgagcatatcaaatatataaatgggcttaattcataaataaatgaaattttttcttattggctaacaaatcagaatc-------------------taatccattctgtgtacaagatgcatacctaaacaaagtaattcagaaaagtttaaaataaaaggaAGATCAATATTA-CTTTTGCATAATCGCAAGATTATGAAGCAAGTCCCACAGTT------TGAGATATGGTAGGATTTAGGAAAAAATACCTGTAGCAAGGTAGGGAGAGGAAATTTATTATATG--------------TCATTCTACA-TAAAGAAATAATAAATACTAATAAAAAGTACCAAATTACAACTTTTAGGAAGCAGAAATGACAGGAAATGAAAGAAGAA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 199767 777 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I a score=40486.000000 s hg38.chr9_KI270719v1_random 16555 4 + 176845 ATAG s panTro5.chr4 135043578 4 + 194502333 atag i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 454 4 + 11745 atag i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 24091 4 - 70559 atag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90437492 4 - 115148730 atag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131379470 4 + 190429646 atag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130898156 4 + 189454096 atag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34889402 4 - 40319822 atag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4443616 4 - 9219162 atag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78969073 4 + 135778131 atag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2735106 4 - 3013352 atag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5966636 4 + 8656713 atag i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129396769 4 - 190850796 GCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6480468 4 - 25294431 ACAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4036343 4 - 6311556 ACAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14887329 4 + 15034901 ACAC i aotNan1.NW_018507635v1 C 0 C 0 s tarSyr2.KE944182v1 200544 4 - 1108378 GTAG i tarSyr2.KE944182v1 I 777 I 9055 s canFam3.chr19 44007856 4 - 53741614 ATAG i canFam3.chr19 C 0 I 4 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e otoGar3.GL873702 910489 6447 - 3201129 I a score=1815751.000000 s hg38.chr9_KI270719v1_random 16559 191 + 176845 ACATTAAAACTGGAGATTTTAACATAGCTTATTAATTGGTAAGTCCTTGAAGAATGCAAATAAGCCTCACTTTTACTAA---------------------------------------------------------TTAAAAAAAATTAACACAAATACtgacaaagactctctccttcatcaaactttagtcagatttttgagctctcctctcaactagatcttcacctaggccc---------cttgcctagtct s panTro5.chr4 135043582 191 + 194502333 acattaaaactggagattttaacatagctTATTAATTGGTAAGTCCTTGAAGAATGCAAACAAGCCCCACTTTTAGTAA---------------------------------------------------------TTAAAAAAAATTAACACAAATACtgacaaagactctctccttcatcaaactttagtcagatttttgagctctcctctcagctagatcttcacctaggccc---------cttgcctagtct i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 458 190 + 11745 acattaaaactggagattttaacatagctTATTAATTGGTAAGTCCTTGAAGAATGCAAACAAGCCCCACTTTTAGTAA---------------------------------------------------------TT-AAAAAAATTAACACAAATACtgacaaagactctctccttcatcaaactttagtcagatttttgagctctcctctcagctagatcttcacctaggcct---------cttgcctagtct i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 24095 190 - 70559 acattaaaactggagattttaacatagctTATTAATTGGTAAGTCCTTGAAGAATGC-AATAAGCCTCACTTTTAGTAA---------------------------------------------------------TTAAAAAAAATTAACACAAATACtgacaaagactctctccttcatcaaactttagtcagatttttgagctctcctctcaactagatcttcacctaggccc---------cttgcctagtct i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90437496 195 - 115148730 acattaaaactggagattttaacatagctcATTAATTGGTAAGTCCATGAAGAATGCAAAGAAGCCTCACTTTTAGTAA---------------------------------------------------------TT-AAAAAAATTACCGAAAATACtgacaaagactctctccttaaccaaactttagtcagatttttgagctctcctctcaactagatctccacctaggcccc----tgttcttgcctggtct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131379474 196 + 190429646 acattaaaactggagactttaacaGAGTTTATTAATTGGTAAATCCTTGAAGAATGCAAATAAGCCTCACTTTCAGTAA---------------------------------------------------------TTTAAAAAAATTACCACAGATACtgacgatgactctctccttgatcaaactttagtcagattttttagctctcctctcaactagatctccacctaggcccc----tgtctttgcctggtct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130898160 196 + 189454096 acattaaaactggagactttaacaGAGTTTATTAATTGGTAAATCCTTGAAGAATGCAAATAAGCCTCACTTTCAGTAA---------------------------------------------------------TTTAAAAAAATTACCACAGATACtgacgatgactctctccttgatcaaactttagtcagattttttagctctcctctcaactagatctccacctaggcccc----tgtctttgcctggtct i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34889406 196 - 40319822 acattaaaactggagattttaacaGAGTTTATTAATTGGTAAATCCTTAAAGAATGCAAATAAGCCTCACTTTCAGTAA---------------------------------------------------------TTTAAAAAAATTACCACAGATACtgacgatgactctctccttgatcaaactttagtcagattttttagctctcctctcaactagatctccacctaggcccc----tgtctttgcctggtct i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4443620 196 - 9219162 acattaaaactggagattttaacaTAGTTTATTAATTGGTAAATCCTTGAAGAATGCAAATAAGCCTCACTTTCAGTAA---------------------------------------------------------TTTAAAAAAATTACCACAGATACtgacgatgactctctccttgatcaaactttagtcagatattttagctctcctctcaaccagatctccacctaggcccc----tgtccttgcctggtct i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78969077 196 + 135778131 acattaaaactggagattttaacaTAGTTTATTAATTGGTAAATCCTTGAAGAATGCAAATAAGCCTCACTTTCAGTAA---------------------------------------------------------TTTAAAAAAATTACCACAGATACTGATGATCactctctccttgatcaaactttagtcagattttttagttctcctctcaactagatctccacctaggcccc----tgtccttgcctggtct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2735110 196 - 3013352 acattaaaactggagattttaacaTAGTTTATTAATTGGTAAATCCTTGAAGAATGCAAATAAGCCTCACTTTCAGTAA---------------------------------------------------------TTTAAAAAAATTACCACAGATACtgacgatgactctctccttgatcaaactttagtcagactttttagctctcctctcaactagatctccacctaggcccc----tgtccttgcctggtct i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5966640 186 + 8656713 acattaaaactggagattttaacaTAGCATATTAATTGGTAAATCCTTGAAGAATGCAAATAAGCCTCACTTCCAGTAA--------------------------------------------------------TTTTAAAAGAATTACCACAGATACTGACAA-----------ttgatcaaactttagtcagattttttagctctcctctcaactagacctccacctaggcccc----tgtccttgcctcatct i colAng1.NW_012114544v1 C 0 I 46 s calJac3.chr3 129396773 200 - 190850796 ACATTAAACCTGGAGATTTTAACATAGCTTATTAATTTGCAAGTCCTTGAAGAGTGTAAATAAGCCTCACTTTCAGAAA---------------------------------------------------------TTTATAAAAATCTCCACATATTCtgacaaagacttgttcattgatcaaactgcagtcagatttttgagctctcctctcaactagatctccacgtaggcccctgtatgtccttgcctagtct i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6480472 200 - 25294431 ACATTAAACCTGGAGATTTTAACATAGTGTATTAATTTGTAAGTCCCTGAAGAATGTAAATAAGCCTCACTTTCAGTAA---------------------------------------------------------TTTATAAAAATTTCCGCAAATTCtgacaaagactcgctccttgatcaaactgtagtcagattttttagctcctctctcaactagatctccacttaggcccctgtctgtccttgcctggtct i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4036347 200 - 6311556 ACATTAAACCTGGCGATTTTAACACAGCTTATTAATTTGTAAGTCCTTGAAGAATGTAAATAAGCCTCACTTTCAGTAA---------------------------------------------------------TTTATAAAAATTTCCACAAATTCtgacaaagacttgctccttgatcaaactgtagtcagatttttgagctctcctctcaactagatctccacgtaggcccctgtctgtccttgcctggtct i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14887333 200 + 15034901 ACATTAATCTTGGAGATTTTAACATAGCTTATTAATTTGTAAGTCCTTGAAGAATGTAAATAAGCCTCACTTTCAGTAA---------------------------------------------------------TTTATAAAAATTTCCACAAATTCtgacaaagactcgttccttgatcaaactgtagtcagattattgagctctcctctcaactagctctccacgtaggcccctgtctgtccttgcctggtct i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44007864 236 - 53741614 ACATTAACACTGAGGGTTTTCACAGAGCTTATCCAGTGGATAATCATTGAAAAATATAAATATGTTTCTGTTTCAATAAAAAATTTACTAGAGAGGGATGCCTGGGTGGCTCAGGCGTCCCtaaataaataaaatcttttaaaaaaataCCATAGATACtgatgaagactttctccttgaccaaacttc--tcaaccttt----------tctggattaggcctcgactttgacac-----cttccttgatag---- i canFam3.chr19 I 4 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I a score=259397.000000 s hg38.chr9_KI270719v1_random 16750 27 + 176845 -------ccatagctcacttttaacaagaatcct s panTro5.chr4 135043773 27 + 194502333 -------ccatagctcacttttaacaagaatcct i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 648 27 + 11745 -------ccatagctcacttttaacaagaatcct i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 24285 27 - 70559 -------ccatagctcacttttaacaagaatcct i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90437691 27 - 115148730 -------ccatagctcacttttaacaagaatcct i nomLeu3.chr7b C 0 I 2 s rheMac8.chr5 131379670 27 + 190429646 -------ccgtagctcacttttaacaagaatcct i rheMac8.chr5 C 0 I 2 s macFas5.chr5 130898356 27 + 189454096 -------ccgtagctcacttttaacaagaatcct i macFas5.chr5 C 0 I 2 s macNem1.NW_012010911v1 34889602 27 - 40319822 -------ccgtagctcacttttaacaagaatcct i macNem1.NW_012010911v1 C 0 I 2 s cerAty1.NW_012000798v1 4443816 27 - 9219162 -------ccatagctcacttttaacaagaatcct i cerAty1.NW_012000798v1 C 0 I 2 s chlSab2.chr7 78969273 27 + 135778131 -------ccgtagctcacttttaacaagaatcct i chlSab2.chr7 C 0 I 2 s manLeu1.NW_012103277v1 2735306 27 - 3013352 -------ccgtagctcacttttaacaagaatcct i manLeu1.NW_012103277v1 C 0 I 2 s calJac3.chr3 129396973 27 - 190850796 -------ccatagctcacttttaacaggaatcct i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6480672 25 - 25294431 -------ccatagct--cttttagcaagaatcct i saiBol1.JH378129 C 0 I 2 s cebCap1.NW_016107420v1 4036547 27 - 6311556 -------ccatagctcacttttaacaagaatcct i cebCap1.NW_016107420v1 C 0 I 2 s aotNan1.NW_018507635v1 14887533 27 + 15034901 -------ccatagctcacttttagcaagaatcca i aotNan1.NW_018507635v1 C 0 I 2 s canFam3.chr19 44008100 34 - 53741614 gcatgtacagtagcccagttttagtaataatcca i canFam3.chr19 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e colAng1.NW_012114544v1 5966826 46 + 8656713 I a score=3611580.000000 s hg38.chr9_KI270719v1_random 16777 358 + 176845 -------------taagtccatatagacagaa-------------------------tcttgatatctgatcaccc-tgagctgccttcagcaagaatcctgttaatttggtttagcaag-agttcccctacttttgatgtctcctcttagtaat------tttccatccactga------ccccctcacactgctcttttgctataaatttcca---tgtgtgcttgtatttggaattgagctcctttctctactaaagtctcttttcctgtgttgcaataatttctgaataaaatct-ttctttactgctttaattaccctctggctctggttctctttgacaTTACTCTTTGAAGAATCACTTTAGGGGAAAAGAATAAATGCAAGAAGACAAAGGCAGAGACTATTATCC s panTro5.chr4 135043800 358 + 194502333 -------------taagtccatatggagagaa-------------------------tcttgatatctgatcaccc-tgagctgccttcagcaagaatcctgttaatttggtttagcaag-agttcccctacttttgatgtctcctcttagtaat------tttccatccactga------cctcctcacactgctcttttgctataaatttcca---tgtgtgcctgtatttggaattgagctcatttctctactaaagtctctttttctgtgttgcaataatttctgaataaaatct-ttctttactgctttaattaccctctggctctggttctctttgacaTtactctttgaagaatcactttagggaaaaagaataaatgcaagaagacaaagtcagagactattatcc i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 675 358 + 11745 -------------taagtccatatggagagaa-------------------------tcttgatatctgatcaccc-tgagctgccttcagcaagaatcctgttaatttggtttagcaag-agttcccctacttttgatgtctcctcttagtaat------tttccatccactga------cctcctcacactgctcttttgctatcaatttcca---tgtgtgcctgtatttggaattgagctcatttctctactaaagtctctttttctgtgttgcaataatttctgaataaaatct-ttctttactgctttaattaccctctggctctggttctctttgacaTtactctttgaagaatcactttagggaaaaagaataaatgcaagaagacaaagtcagagactattatcc i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 24312 358 - 70559 -------------taagtccatatggagagaa-------------------------tcttgatatctgatcaccc-tgagctgccttcagcaagaatcctgttaatttggtttagcaag-agttcccctacttttgatgtctcctcttagtaat------tttccatccactga------ccccctcacactgctcttttgctataaatttcca---tgtgtgcctgtatttggaattgagctcatttctctactaaagtctctttttctgtgttgcaataatttctgaataaaatct-ttctttactgctttaattaccctctggctctggttctctttgacaTtactctttgaagaatcactttagggaaaaagaaaaaatgcaagaagacaaagtcagagactattatcc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90437720 365 - 115148730 -------------taagtccatatagagagaatctcc-----------------cactcttgatatctgatcaccg-tgagctgccttcagcaagaatcctgttaatttggtttagcaag-agttcctccacttttgacgtctcttcttagtaat------tttccatccactga------ccccttcacactgctcttttgctataaatttcca---tttgtgcttgtatttggaattgagctcatttctatactaaagtctcttttgctgtgttgcaataatttctgaataaaatct-ttctttacttctttaattaccctctggctctggttctctttgacaTtactctttgaagaatcaatttaggggaaaag-ataaatgcaagaagacaaagtcagagactattatcc i nomLeu3.chr7b I 2 C 0 s rheMac8.chr5 131379699 366 + 190429646 -------------taagtccatatagagagaatctcc-----------------cacttttgatatctgatcactc-tgacctgccttcagcaagaatcctgttaatttggtttagcaag-atttcccctactttcgatgtatcctcatagtaat------tttccatccactga------ccccctcacactgctcttttgctataaatttcca---tttgtgcctgtgtttggaattgagctcatttctatattaaagtatctcttcctgggtcgcaataatttctgaataaaatct-ttctttactgctttaattatcctctggctctggatgtctttgacaTtactctttgaagaatcactttaggggaaaagaataaatgcaagaagacaatgtcagagaccattatcc i rheMac8.chr5 I 2 C 0 s macFas5.chr5 130898385 366 + 189454096 -------------taagtccatatagagagaatctcc-----------------cacttttgatatctgatcactc-tgacctgccttcagcaagaatcctgttaatttggtttagcaag-atttcccctactttcgatgtatcctcatagtaat------tttccatccactga------ccccctcacactgctcttttgctataaatttcca---tttgtgcctgtatttggaattgagctcatttctatattaaagtatctcttcctgggtcgcaataatttctgaataaaatct-ttctttactgctttaattatcctctggctctggatgtctttgacaTtactctttgaagaatcaatttaggggaaaagaataaatgcaagaagacaatgtcagagaccattatcc i macFas5.chr5 I 2 C 0 s macNem1.NW_012010911v1 34889631 366 - 40319822 -------------taagtccatatagagagaatctcc-----------------cacttttgatatctgatcactc-tgacctgccttcagcaagaatcctgttaatttggtttagcaag-atttcccttactttcgatgtatcctcatagtaat------tttccatccactga------ccccctcacactgctcttttgctataaatttcca---tttgtgcctgtatttggaattgagctcatttctatattaaagtatctcttcctgggtcgcaataatttctgaataaaatct-ttctttactgctttaattatcctctggctctggatgtctttgacaTtactctttgaagaatcaatttaggggaaaagaataaatgcaagaagacaatgtcagagaccattatcc i macNem1.NW_012010911v1 I 2 C 0 s cerAty1.NW_012000798v1 4443845 366 - 9219162 -------------taagtccatatagagagaatctcc-----------------cacttttgatatcttatcactc-tgacctgacttcagcaagaatcctgttaatttggtttagcaag-atttcccctactttcgatgtatcctcatagtaat------tttccatccactga------ccccctcacactgctcttttgctataaatttcca---tttgtgcctgtctttggaattgagctcatttctatattaaagtatctcttcctgtgtcgcaataatttctgaataaaatct-ttctttactgctttaatcaccctctggctctggatgtctttgacaTTACTCTTTGAAGAATCAATTTAGGGGAAAAGAATAAATACAAGAAGACAAAGTCAGAGACTATTATCC i cerAty1.NW_012000798v1 I 2 C 0 s chlSab2.chr7 78969302 366 + 135778131 -------------taagtccatatagagagaatctcc-----------------cacttttgatatctgatcactc-tgacctgacttcagcaagaatcctgttaaattggtttagcaag-atttcccctactttcgatgtatcctcatagtaat------tttccatccactga------cctcctcacattgctcttttgctataaatttcca---tttgtgcctgtctttggaattgagctcatttctatattaaagtatctcttcctatgtcacaataatttctgaataaaatct-ttctttactgctttaatcaccctctggctctggatgtctttgacaTTACTCTTTGAAGAACCAATTTAGGGGAAAAGAATAAATACAAGAAGACAAAGTCAGAGACTATTATCC i chlSab2.chr7 I 2 C 0 s manLeu1.NW_012103277v1 2735335 366 - 3013352 -------------taagtccatatagagagaatctcc-----------------tacttttgatattttatcactc-tgacctgacttcagcaagaatcctgttaatttggtttagcaag-atttcctctacttttgatgtatcctcatagtaat------tttccatccactga------ccccctcacactgctcttttgctataaatttcca---tttgtgcctgtctttggaattgagctcatttctatattaaagtatctcttcctgtgtcgcaataatttctgaataaaatct-ttctttactgctttaatcaccctctggctctggatgtctttgacaTTACTCTTTGAAGAATCAATTTAGGGGAAAAGAATAAATACAAGAAGACAAAGTCAGAGACTATTATCC i manLeu1.NW_012103277v1 I 2 C 0 s colAng1.NW_012114544v1 5966872 366 + 8656713 -------------taagtccatatagagagaatctcc-----------------cactcttgatacctgatcactc-tgacctgccttcagcaagaattctgttaatttggtttagcaag-atttcccctactttcgatgtatcctcatagtaat------tttccatccactga------ccccctcacactgctcttttgctataaattttca---tttgtgcctgtatttggaattgagctcatttctatattaaagtatctcttcctgtgttgcaataatttctgaataaaatct-ttctgtattgctttaatcaccctctggttctggatgtctttgacaTTACTCTTTGAAGAATCAATTTAGGGGAAAAGAATAAATGCAAGAAGACAAAGTCAGAGACTATTACCC i colAng1.NW_012114544v1 I 46 C 0 s calJac3.chr3 129397002 364 - 190850796 -------------taagtctacata----gaatctcc-----------------cactcttgatatctgatcacccttgacctgccttcagcaagaatcctgttaatttggtttagtaag-atttcccctacttttgatgtttcctcttagtatt----atatttaattcactga------cccccttacacaactcttttgctatacatttcct---tttgtgcttgta-ttggaattgagctcatttctatactaaagtctctttttctgtgttgcaataatttctgaataaaatct-ttctttgctgttttaattaccctctggctctggttctctatgacaTTACTCTTTGAATAATCAATTTAGGGGAAAAGAATAAATTCAAGGAGACAAAGTCAGAGACTATTATCC i calJac3.chr3 I 2 C 0 s saiBol1.JH378129 6480699 367 - 25294431 -------------taagtctacatagagggaatctcc-----------------ccctcttgatatctcatcacccttgacctgccttcagcaagaatcctgttaatttggtttagcaag-attttccctacttttgctgtttcctcttagtatt-----tttttaatccactga------cccccttacactgctattttgctatatatttcct---tttctgcttgta-ttggaattgagctcatttctatactaaagtctcttttcctgtgtagcaataatttctgaataaaacct-ttctttgctgttttaattaccttctggctctggttctctatgacaTTATTCTTTGAATAATCAATTTAGGGGAAAAGAATAAATTCAAGGAGACAGAGTCAGAGACTCTTATCC i saiBol1.JH378129 I 2 C 0 s cebCap1.NW_016107420v1 4036576 372 - 6311556 -------------taagcctatgtagagagaatctcc-----------------cacttttgatatctgatcacccttgatctgccttcagcaagaatcctgttaatttggtttagcaag-atttcccctacttttggtgtttctttttagttttttttttttttaattcactga------cccccttacactgctattttgctatacatttcct---tttctgcttgta-ttagaattgagctcatttctatactaaagtctcttttcctgtgttgctataatttctgaataaaacct-ttcattgctgttttaattaccctctggctctggctctctatgacaTTACTCTTTGAATAATCAATTTAGGGGAAAAGAATAAATTCAAGGAGACAAAGTCAGAGACTATTATCC i cebCap1.NW_016107420v1 I 2 C 0 s aotNan1.NW_018507635v1 14887562 368 + 15034901 -------------taagtctacatagagagaatctcc-----------------cactcttgatatctgatcacccttgacctgccttcagcaagaatcctgttaatttggtttagcaag-agttcccctacttttgatgtttcctcttggtatt----gtttttaatccactga------cccccttacacaaccattttgctatacatttcct---tttgtgcttgta-ttggaactgagctcatttctatactaaagtctcttttcccgtgttgcaataatttctgaataaaatct-ttctttgctgttttaattaccctctggctctggttctctatgacaTTACTCTTTGAATAATCAATTCAGGGGAAAAGAATAAATTCAAGGAGACAAAGTCAGAGACTATTATCC i aotNan1.NW_018507635v1 I 2 C 0 s canFam3.chr19 44008134 387 - 53741614 ttttagggagaagtaatccattttagggagaatgccctaccctttagatcaaatcactttttacagctgatccctc-tggcctaccatcaggaagaattctgttaatttggtttagtaagaaatccccctaccgtagtcgtctcatcttaa----------tttgtacccattgacatccccttccccactcttctctttctctatcaattcccacctttctttgctgtatttggagttgagctcatctctatactgaaatctcctttaccctattgccatagtttctgaataaaacttactgtttactactttaacagctgtccagttctggttctgtctgacCTTACTGTTTGaagaatggattttagg---aagaatggattca-------------agagtctattgtcc i canFam3.chr19 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I a score=31722.000000 s hg38.chr9_KI270719v1_random 17135 6 + 176845 AAATAT s panTro5.chr4 135044158 6 + 194502333 aaatat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 24670 6 - 70559 aaatat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438085 6 - 115148730 aaatat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380065 6 + 190429646 acatac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130898751 6 + 189454096 acatac i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34889997 6 - 40319822 acatac i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444211 6 - 9219162 ACACAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78969668 6 + 135778131 ACACAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2735701 6 - 3013352 ACACAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5967238 6 + 8656713 ACATAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397366 6 - 190850796 AGATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481066 6 - 25294431 AGATAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4036948 6 - 6311556 AGATAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14887930 6 + 15034901 AGATAT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44008521 6 - 53741614 caatct i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 1033 0 + 11745 C e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I a score=7847.000000 s hg38.chr9_KI270719v1_random 17141 1 + 176845 A s gorGor5.CYUI01001450v1 24676 1 - 70559 a i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438091 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380071 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130898757 1 + 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890003 1 - 40319822 a i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444217 1 - 9219162 A i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78969674 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2735707 1 - 3013352 A i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5967244 1 + 8656713 A i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397372 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481072 1 - 25294431 G i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4036954 1 - 6311556 A i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14887936 1 + 15034901 A i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44008527 1 - 53741614 a i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 1033 0 + 11745 C e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e panTro5.chr4 135044164 0 + 194502333 C a score=3850.000000 s hg38.chr9_KI270719v1_random 17142 2 + 176845 GA s manLeu1.NW_012103277v1 2735708 2 - 3013352 GA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5967245 2 + 8656713 GT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397373 2 - 190850796 GA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481073 2 - 25294431 GA i saiBol1.JH378129 C 0 I 2 s cebCap1.NW_016107420v1 4036955 2 - 6311556 GA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14887937 2 + 15034901 GA i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44008528 2 - 53741614 ga i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 1033 0 + 11745 C e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e chlSab2.chr7 78969675 0 + 135778131 C e cerAty1.NW_012000798v1 4444218 0 - 9219162 C e macNem1.NW_012010911v1 34890004 0 - 40319822 C e macFas5.chr5 130898758 0 + 189454096 C e rheMac8.chr5 131380072 0 + 190429646 C e nomLeu3.chr7b 90438092 0 - 115148730 C e gorGor5.CYUI01001450v1 24677 0 - 70559 C e panTro5.chr4 135044164 0 + 194502333 C a score=9393.000000 s hg38.chr9_KI270719v1_random 17144 10 + 176845 ATGGAGATAA-- s manLeu1.NW_012103277v1 2735710 10 - 3013352 ATGGAGATAA-- i manLeu1.NW_012103277v1 C 0 C 0 s calJac3.chr3 129397375 10 - 190850796 AGAGAGATAA-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481077 10 - 25294431 AGAGAGATAA-- i saiBol1.JH378129 I 2 C 0 s cebCap1.NW_016107420v1 4036957 10 - 6311556 ATAGAGATAA-- i cebCap1.NW_016107420v1 C 0 I 100 s aotNan1.NW_018507635v1 14887939 10 + 15034901 CTAGAGATAA-- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44008530 10 - 53741614 --atagacaaga i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 1033 0 + 11745 C e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e colAng1.NW_012114544v1 5967247 0 + 8656713 C e chlSab2.chr7 78969675 0 + 135778131 C e cerAty1.NW_012000798v1 4444218 0 - 9219162 C e macNem1.NW_012010911v1 34890004 0 - 40319822 C e macFas5.chr5 130898758 0 + 189454096 C e rheMac8.chr5 131380072 0 + 190429646 C e nomLeu3.chr7b 90438092 0 - 115148730 C e gorGor5.CYUI01001450v1 24677 0 - 70559 C e panTro5.chr4 135044164 0 + 194502333 C a score=4046.000000 s hg38.chr9_KI270719v1_random 17154 4 + 176845 TGat s manLeu1.NW_012103277v1 2735720 4 - 3013352 TGAT i manLeu1.NW_012103277v1 C 0 I 761 s calJac3.chr3 129397385 4 - 190850796 TGAT i calJac3.chr3 C 0 I 79 s saiBol1.JH378129 6481087 4 - 25294431 AGAT i saiBol1.JH378129 C 0 I 6 s aotNan1.NW_018507635v1 14887949 4 + 15034901 CGAT i aotNan1.NW_018507635v1 C 0 I 96 s canFam3.chr19 44008540 4 - 53741614 tgat i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 1033 0 + 11745 C e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e colAng1.NW_012114544v1 5967247 0 + 8656713 C e chlSab2.chr7 78969675 0 + 135778131 C e cerAty1.NW_012000798v1 4444218 0 - 9219162 C e macNem1.NW_012010911v1 34890004 0 - 40319822 C e macFas5.chr5 130898758 0 + 189454096 C e rheMac8.chr5 131380072 0 + 190429646 C e nomLeu3.chr7b 90438092 0 - 115148730 C e gorGor5.CYUI01001450v1 24677 0 - 70559 C e panTro5.chr4 135044164 0 + 194502333 C a score=28.000000 s hg38.chr9_KI270719v1_random 17158 4 + 176845 atca s saiBol1.JH378129 6481097 4 - 25294431 GTCT i saiBol1.JH378129 I 6 C 0 s canFam3.chr19 44008544 4 - 53741614 gaca i canFam3.chr19 C 0 I 12 e panPan2.chrUn_NW_014014795v1 1033 0 + 11745 C e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e calJac3.chr3 129397389 79 - 190850796 I e colAng1.NW_012114544v1 5967247 0 + 8656713 C e manLeu1.NW_012103277v1 2735724 761 - 3013352 I e chlSab2.chr7 78969675 0 + 135778131 C e cerAty1.NW_012000798v1 4444218 0 - 9219162 C e macNem1.NW_012010911v1 34890004 0 - 40319822 C e macFas5.chr5 130898758 0 + 189454096 C e rheMac8.chr5 131380072 0 + 190429646 C e nomLeu3.chr7b 90438092 0 - 115148730 C e gorGor5.CYUI01001450v1 24677 0 - 70559 C e panTro5.chr4 135044164 0 + 194502333 C a score=251.000000 s hg38.chr9_KI270719v1_random 17162 4 + 176845 tact s saiBol1.JH378129 6481101 4 - 25294431 TGCT i saiBol1.JH378129 C 0 I 82 e panPan2.chrUn_NW_014014795v1 1033 0 + 11745 C e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44008548 12 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e calJac3.chr3 129397389 79 - 190850796 I e colAng1.NW_012114544v1 5967247 0 + 8656713 C e manLeu1.NW_012103277v1 2735724 761 - 3013352 I e chlSab2.chr7 78969675 0 + 135778131 C e cerAty1.NW_012000798v1 4444218 0 - 9219162 C e macNem1.NW_012010911v1 34890004 0 - 40319822 C e macFas5.chr5 130898758 0 + 189454096 C e rheMac8.chr5 131380072 0 + 190429646 C e nomLeu3.chr7b 90438092 0 - 115148730 C e gorGor5.CYUI01001450v1 24677 0 - 70559 C e panTro5.chr4 135044164 0 + 194502333 C a score=0.000000 s hg38.chr9_KI270719v1_random 17166 2116 + 176845 gaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctttcaccactcatattcaacatagtgttggaagttctggccagggtaattaggcaggggaaggaaataaagggtattcaattaggaaaagaggaaatcaaattgtccctgtttgcagatgacatgattgtatatctagaaaactccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagactgacagagagccaaatcatgagtgaactcccattcacaattccttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcagggagaactacaaaccgctgctcaatgaaataaaagaggatacaaacaaatgaaagaacattccatgctcatgggtaggaagaatcaatattgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcatatgaaaccaaaaaagagcccgcattgccaagtcaatgctaagccaaaagaacaaagctggaggcatcatgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagacatatagatcaatgtaacagaacagagccttccgaaataatgccgcatatctacaactatctgatctttgacaaacctgagaaaaacaagaaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaagatggattaaggacttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacacaggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaatccaaaattgacaaatgggatctaattaaactaaggagttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaattttcgcaacctactcatctgtcaaagggctaataaccagaatctacagtgaactcaaacaaattgacaagaaaaaaacaaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatgctcaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagagtggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgctggtgggactgtaaactagttcaaccactgtggaagtcagtgtggcgattcctcagggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaagaactataaatcatgcggctatgaagacacatgcacacgtatgtttactgcggcactattcacaatagtaaagacttggaaccaacccaaatgtccaacaatgatagactggattaagaaaatgtggcatatatacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacgtggatgaaattggaaatcatcattctcagtaaactatcgcaagaacaaaaaaccaaacactgcatattctcactcataggtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacactctggggactgtggtggggtggggggagggggaagggatagctttaggagatacacctaatgctaattgacgagttaatgggtgcagcacaccaacatggcacatgtatacatatgtaactaacctgcacattgtgcacatgtaccctaagacttaaagtataataataataataaa e panPan2.chrUn_NW_014014795v1 1033 0 + 11745 C e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44008548 12 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I e colAng1.NW_012114544v1 5967247 0 + 8656713 C e manLeu1.NW_012103277v1 2735724 761 - 3013352 I e chlSab2.chr7 78969675 0 + 135778131 C e cerAty1.NW_012000798v1 4444218 0 - 9219162 C e macNem1.NW_012010911v1 34890004 0 - 40319822 C e macFas5.chr5 130898758 0 + 189454096 C e rheMac8.chr5 131380072 0 + 190429646 C e nomLeu3.chr7b 90438092 0 - 115148730 C e gorGor5.CYUI01001450v1 24677 0 - 70559 C e panTro5.chr4 135044164 0 + 194502333 C a score=332.000000 s hg38.chr9_KI270719v1_random 19282 6 + 176845 aAATAA s panPan2.chrUn_NW_014014795v1 1033 6 + 11745 aaatat i panPan2.chrUn_NW_014014795v1 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44008548 12 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I e colAng1.NW_012114544v1 5967247 0 + 8656713 C e manLeu1.NW_012103277v1 2735724 761 - 3013352 I e chlSab2.chr7 78969675 0 + 135778131 C e cerAty1.NW_012000798v1 4444218 0 - 9219162 C e macNem1.NW_012010911v1 34890004 0 - 40319822 C e macFas5.chr5 130898758 0 + 189454096 C e rheMac8.chr5 131380072 0 + 190429646 C e nomLeu3.chr7b 90438092 0 - 115148730 C e gorGor5.CYUI01001450v1 24677 0 - 70559 C e panTro5.chr4 135044164 0 + 194502333 C a score=300.000000 s hg38.chr9_KI270719v1_random 19288 1 + 176845 G s panTro5.chr4 135044164 1 + 194502333 g i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1039 1 + 11745 g i panPan2.chrUn_NW_014014795v1 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44008548 12 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I e colAng1.NW_012114544v1 5967247 0 + 8656713 C e manLeu1.NW_012103277v1 2735724 761 - 3013352 I e chlSab2.chr7 78969675 0 + 135778131 C e cerAty1.NW_012000798v1 4444218 0 - 9219162 C e macNem1.NW_012010911v1 34890004 0 - 40319822 C e macFas5.chr5 130898758 0 + 189454096 C e rheMac8.chr5 131380072 0 + 190429646 C e nomLeu3.chr7b 90438092 0 - 115148730 C e gorGor5.CYUI01001450v1 24677 0 - 70559 C a score=8595.000000 s hg38.chr9_KI270719v1_random 19289 2 + 176845 GA s panTro5.chr4 135044165 2 + 194502333 ga i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1040 2 + 11745 ga i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 24677 2 - 70559 ga i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438092 2 - 115148730 ga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380072 2 + 190429646 ga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130898758 2 + 189454096 ga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890004 2 - 40319822 ga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444218 2 - 9219162 GA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78969675 2 + 135778131 GA i chlSab2.chr7 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44008548 12 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I e colAng1.NW_012114544v1 5967247 0 + 8656713 C e manLeu1.NW_012103277v1 2735724 761 - 3013352 I a score=1630599.000000 s hg38.chr9_KI270719v1_random 19291 356 + 176845 ATGGAGATAATGATgatggtaatgtcttggatactgattgcaatggactgcatgtctgttgccaccctgtctctgaaacttataggtggaaatcctaacccttaatatgatggtattaggaggtgggactttcaggaggtggttacatcatgaggttggagcccttctaaatggaactagttcccctatacaatagacccaagagagttctctcactctctggcatgtgaggatacaagaagaaaatggtagtctgcaacttagaagagagatatcactgaaacctggtcactctggtaccatggtctcagacttctagcctttagaactgtgaaaaaattgatttttgttatttc s panTro5.chr4 135044167 356 + 194502333 atggagataatgatgatggtgatgtcttggatagtgattgcaatggactgcatggctgttgccaccctgtccctgaaacttataggtggaaatcctaacccttaatatcatggtattaggaggtgggactttcaggagatggttacatcatgaggttggagcccttctaaatggaactagttcccttatataagggacccaagagagttctctcactctctgacatgtgaggatacaagaagaaaatggtagtctgcaacttagaagagagatatcactgaaacctggtcactctggtaccatggtctcagacttctagcctttagaactgtgaaaaaattgatttttgttgtttc i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1042 356 + 11745 atggagataatgatgatggtgatgtcttggatagtgattgcaatggactgcatggctgttgccaccctgtccctgaaacttataggtggaaatcctaacccttaatatcatggtattaggaggtgggactttcaggagatggttacatcatgaggttggagcccttctaaatggagctagttcccttatataagggacccaagagagttctctcactctctgacatgtgaggatacaagaagaaaatggtagtctgcaacttagaagagagatatcactgaaacctggtcactctggtaccatggtctcagacttctagcctttagaactgtgaaaaaattgatttttgttgtttc i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 24679 355 - 70559 atggagataatgatgatggtgatgtcttggatagtgattgcaatggactgcatggctgttgccaccctgtccctgaaacttataggtggaaatcctaacccttaatatgatggtattaggaggtgggactttcaggaggtggttacatcatgaggttggagcccttctaaatggaactagttcccttatataagggacccaagagagttctctcactctctgacatgtgaggatacaagaagaaaatggtagtctgcaacttagaagagagatatcactgaaacctggtcactctggtaccatggtctcagacttctagcctttagaactgtgaaaaaattgatttttgtt-tttc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438094 356 - 115148730 aaggagataatgacgacggtgacgtcttggatagtgattgcaatggactgcatggctgttgccaccctatccccgaaaagtataggtggaaatcttaaccgttaatatgatggtattaggaggtggaacttttgggaggtggttacatcatgaggttggagcccttctaaatggaactagttcccttatataagggacccaagagagttctctcactctctgccatgtgagcatacaagaagaaaatggtagtctgcaacttagaagacagatatcactgaaacttggtcactctggtaccatggtctcagacttccagcctttaaaactgtgaaaaaattcatttttgttgtttc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380074 353 + 190429646 atggagataatgatgatggtgatgtcttggatagtgattgcaatggactgcatggctgttgccaccctgtccccacaacttataggttggaatcctgaccctttatatgatggtattaggaggtaaaacttttgggaggtggttacatcatgaggttggatcccttctaaatggaactagttcccttatataagggacacaagagacttctctcactctctgccctgt--ggatacaagaagaaaatggtagtctgcaacttagaagagagatatcactaaaatctggtcactctggtaccatggtctcagacttccagcttttagaactgcg-aaaaattgatttctgctgtttc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130898760 353 + 189454096 atggagataatgatgatggtgatgtcttggatagtgattgcaatggactgcatggctgttgccaccctgtccccacaacttataggttgaaatcctgaccctttatatgatggtattaggaggtaaaacttttgggaggtggttacatcatgaggttggatcccttctaaatggaactagttcccttatataagggacacaagagacttctctcactctctgccatgt--ggatacaagaagaaaatggtagtctgcaacttagaagagagatatcactaaaatctggtcactctggtaccatggtctcagacttccagcttttagaactgcg-aaaaattgatttctgctgtttc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890006 353 - 40319822 atggagataatgatgatggtgatgtcttggatagtgattgcaatggactgcatggctgttgccaccctgtccccacaacttataggttgaaatcctgaccctttatatgatggtattaggaggtaaaacttttgggaggtggttacatcatgaggttggatcccttctaaatggaactagttcccttatataagggacacaagagacttctctcactctctgccatgt--ggatacaagaagaaaatggtagtctgcaacttagaagagagatatcactaaaatctggtcactctggtaccatggtctcaaacttccagcttttaaaactgcg-aaaaattgatttctgctgtttc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444220 353 - 9219162 ATGGAGATAATGATGATGGTGATGTCTTGGATAGTGATtgcaatggactgcatggctgctgccaccctgtccccacaacttataggttgaaatcctgaccctttatatgatggtattaggaggtaaaacttttgggaggtggttacatcatgaggttggatcccttctaaatggaactagttcccttatataagggacacaagagacttctctcactctttgccatgt--ggatacaagaagaaaatggtagtctgcaacgtagaagagagatatcactaaaatctggtcactctggtaccatggtttcagacttccagcttttagaactgcg-aaaaattgatttctgctgtttc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78969677 353 + 135778131 ATGGAGATAATGATGATAGTGATGCCTTGGAGAGTGATtgcaatggactgcatggctgctgccaccctgtccccacaacttataggttgaaatcctgaccctttatatgatggtattaggaggtaaaacttttgggaggtggttacatcatgaggttggatcccttctaaatggaactagttcccttatataagggacacaagagacttctctcactctctgccatgt--gattacaagaggaaaatggtagtctgcaacttagaagagagatatcactaaaatctggtcactctggtaccatggtctcagacttccaacttttagaactgcg-aaaaattgatttctgctgtttc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5967247 353 + 8656713 ATGGAGATAATGATGATGGTGATGTCTTGGATAGTGACtgcaatggactgcatggctgctgccaccctgtccccacaacttatagattgaaatcctgacccttaatatgatggtattaggaggtaaaacttttgggaggtggttacatcatgaggttggaccccttctaaatggaactagttcccttatataagggacacaagagacttctctcactctctgccatgt--ggatacaagaagaaaatggtagtctgcaacttagaagagagatatcactaaaatctggacactctggtactatagtctcagacttccagcctttagaactgca-aaaaattgatttctgccgtttc i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 26293419 2494 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44008548 12 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I e manLeu1.NW_012103277v1 2735724 761 - 3013352 I a score=283880.000000 s hg38.chr9_KI270719v1_random 19647 50 + 176845 taagccacctagtctataggtctttgtgatagcagtcagaattgactaaa s panTro5.chr4 135044523 50 + 194502333 taagccacctagtctataggtctttgtgatagcagccagaattgactaaa i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1398 50 + 11745 taagccacctagtctataggtctttgtgatagcagccagaattgactaaa i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25034 50 - 70559 taagccacctagtctataggtctttgtgatagcagccagaattgactaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438450 50 - 115148730 taagccacctagtctataggtctttgtgatagcagccagaatgtactaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380427 50 + 190429646 taagccacctagtctatgggtctttgtgatagcagccagaattgactaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899113 50 + 189454096 taagccacctagtctatgggtctttgtgatagcagccagaattgactaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890359 50 - 40319822 taagccacctagtctatgggtctttgtgatagcagccagaattgactaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444573 50 - 9219162 taagccacctagtctatgggtctttgtgatagcagccagaattgactaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970030 50 + 135778131 taagccacctagtctatgggtctttgtgatagcagccagaattgactaaa i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5967600 50 + 8656713 taagccacctagtctatgggtctttgtgatagcagacagaattgactaaa i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26295913 50 - 93316391 taagccacccaacctatggttctttgtgatagtagccaaaaccaactgag i micMur3.chr14 I 2494 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44008548 12 - 53741614 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I e manLeu1.NW_012103277v1 2735724 761 - 3013352 I a score=263414.000000 s hg38.chr9_KI270719v1_random 19697 45 + 176845 acagtaatagtagcaatggcgatggaaagagtgaatgcatttgat s panTro5.chr4 135044573 45 + 194502333 acagtaatagtagcaatggcgatagaaagagtgaatgcatttgat i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1448 45 + 11745 acagtaatagtagcaatggcgatagaaagagtgaatgcatttgat i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25084 44 - 70559 acagtaatagtagcaatggc-atggaaagagtgaatgcatttgat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438500 45 - 115148730 acagtaatagtagcaatggcgatggaaagagtgaatgcatttgat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380477 45 + 190429646 acagtaagagtagcaatggtgatggaaagagtgaatgcatttgag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899163 45 + 189454096 acagtaagagtagcaatggtgatggaaagagtgaatgcatttgag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890409 45 - 40319822 acagtaagagtagcaatggtgatggaaagagagaatgcatttgag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444623 45 - 9219162 acaGTAAGAgtagcaatggtgatggaaagagtgaatgcatttgag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970080 45 + 135778131 acaGTAAGAgtagcaatggtgatggaaagagtgaatgcatttgag i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5967650 45 + 8656713 acTGTAAGAgtagcaatggcgatggaaagagtgaatgtatttgag i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26295963 45 - 93316391 acagtggtagtagcaataatgatggaaagagtgaatgcatttcag i micMur3.chr14 C 0 C 0 s canFam3.chr19 44008560 44 - 53741614 atggtaatagtggcaatggcgat-gacgaagagaatacatttggg i canFam3.chr19 I 12 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I e manLeu1.NW_012103277v1 2735724 761 - 3013352 I a score=132147.000000 s hg38.chr9_KI270719v1_random 19742 19 + 176845 atatactttgaagaaagaa s panTro5.chr4 135044618 19 + 194502333 atatactttgacgaaagaa i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1493 19 + 11745 atatactttgacgaaagaa i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25128 19 - 70559 atatactttgaagaaagaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438545 19 - 115148730 atatactttgaagaaagaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380522 19 + 190429646 atatactttgaataaagaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899208 19 + 189454096 atatactttgaataaagaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890454 19 - 40319822 atatactttgaataaagaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444668 19 - 9219162 atatactttgaataaagaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970125 19 + 135778131 atatactttgaataaagaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736485 19 - 3013352 ATATACTTTCAATAAAGAA i manLeu1.NW_012103277v1 I 761 C 0 s colAng1.NW_012114544v1 5967695 19 + 8656713 atatactttgaataaagaa i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26296008 19 - 93316391 atatactttggtgaaagaa i micMur3.chr14 C 0 C 0 s canFam3.chr19 44008604 19 - 53741614 acatattttagagaaagaa i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 910489 6447 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I a score=670674.000000 s hg38.chr9_KI270719v1_random 19761 94 + 176845 ataacaggactatcagtcatgtggatgtttggcatgagagaaaTGCAAGATGGTAATTAAACAACTT----TGTGTCTAA----------GTCTGAAGGTTGGAGAAT s panTro5.chr4 135044637 94 + 194502333 gtaacaggactatcagtcatgtggacgtttggcatgagagaaaTGCAAGATGGTAATTAAATAACTT----TGTGTCTAA----------GTCTGAAGGTTGAAGAAT i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1512 94 + 11745 gtaacaggactatcagtcatgtggacgtttggcatgagagaaaTGCAAGATGGTAATTAAATAACTT----TGTGTCTAA----------GTCTGAAGGTTGAAGAAT i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25147 94 - 70559 ataacaggactatcagtcatgtggacgtttggcatgagagaaaTGCAAGATGGTAATTAAATAACTT----TGTGTCTAA----------GTCTGAAGGTTGGAGAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438564 94 - 115148730 ataacaggactatcagtcatgtggacgtttggcatgagagaaaTGCAAGATGGTAGTTAAACAACTT----TGTGTCTAA----------GTCTGAAGGTTGGAGAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380541 94 + 190429646 ataacaggactatcagtcctgtgggtgtttggcatgagagaaaTGCAAGATGGTAATTAAACAACTT----TGTGTCTAA----------GTCTGAAGATTGGAGAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899227 94 + 189454096 ataacaggactatcagtcctgtgggtgtttggcatgagagaaaTGCAAGATGGTAATTAAACAACTT----TGTGTCTAA----------GTCTGAAGATTGGAGAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890473 94 - 40319822 ataacaggactatcagtcctgtgggtgtttggcatgagagaaaTGCAAGATGGTAATTAAACAACTT----TGTGTCTAA----------GTCTGAAGATTGGAGAAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444687 94 - 9219162 ataacaggactatctgtcatgtgggtgtgtggcatgagagaaatgcaagatggtaattaaacaactt----tgtgtctaa----------gtctgaaggttggataac i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970144 94 + 135778131 ataacaggactatcagtcatgtgagtgtttggcatgagagaaaTGCAAGATGGTAATTAAACAACTT----TGTGTCTAA----------GTCTGAAGGTTGGAGAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736504 94 - 3013352 ATAACAGGACTGTCAGTCCTGTGGGTGTTTGGCATGAGAGAAATACAAGATGGTAATTAAACAACTT----TGTGTCTAA----------GTCTGAAGGTTGGATAAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5967714 93 + 8656713 ataacaggattatcagtca-gttggtgtttggcatgagagaaaTGCAAGATGGTAATTAAACAACTT----TGTGTCTAG----------GTCTGAAGGTTGGAGAAT i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26296027 81 - 93316391 ataacaggactatcagttatgt----gtttggc---------atgaaagaTGGTGATTAAACAACAC----TGTGTCTAA----------GTCTGAAGGTTAGAGAAT i micMur3.chr14 C 0 I 739 s otoGar3.GL873702 916936 100 - 3201129 acaACCAGACTATCAGTGATGT----GTTCAGCATAAAGAAAATAAAATATGGTGATTAACCAACAC----TGTGTCTAACCAACACTAGGTCTGGAAGTTAGAGAAC i otoGar3.GL873702 I 6447 C 0 s canFam3.chr19 44008623 85 - 53741614 atcacaagaC--CCAGTTATTT---------GCGTGAGAGAAATGAAAGTGGGTAATTAAGTAATACTAAATATGTCTGA----------A--tgaagtttagagaac i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I a score=279346.000000 s hg38.chr9_KI270719v1_random 19855 41 + 176845 AGGCAAAGGTAAAAGTAAAGC-TATGGGAGTTACCGACACTT s panTro5.chr4 135044731 41 + 194502333 AGTCAAAGGTAAAAGTAAAGC-TATGGGAGTTACTGGCACTT i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1606 41 + 11745 AGTCAAAGGTAAAAGTAAAGC-TATGGGAGTTACTGGCACTT i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25241 41 - 70559 AGTCAAAGGTAAAAGTAAAGC-TATGGGAGTTACCGGCACTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438658 41 - 115148730 AGTCAAAGGTAAAAGTAAAGC-TATGGAAGTTACCGACACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380635 41 + 190429646 AGTCAAAGGTAAAAGTAAAAC-TATGGGAGTTACTGACACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899321 41 + 189454096 AGTCAAAGGTAAAAGTAAAAC-TATGGGAGTTACTGACACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890567 41 - 40319822 AGTCAAAGGTAAAAGTAAAAC-TATGGGAGTTACTGACACTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444781 41 - 9219162 agtcaaaggtaaaagtaaaac-tatgggagTTACTGAAACTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970238 41 + 135778131 AGTCAAAGGTAAAAGTAAAAC-TATGGGAGTTACTGACACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736598 41 - 3013352 AGTCAAAGGCAAAAGTAAAAC-TATGGGAGTTACTGACACTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5967807 41 + 8656713 AGTCAAAGGTAAAAGTAAAAC-TATGGGAGTTACTGACACTT i colAng1.NW_012114544v1 C 0 C 0 s otoGar3.GL873702 917036 42 - 3201129 AGGCAGAAGAAAAAGTAAAATGTTTTGGTGTTACCAATGTTT i otoGar3.GL873702 C 0 I 1735 s canFam3.chr19 44008708 41 - 53741614 agtcagaggtagaaattaaat-tgtaggagttatcaacacgt i canFam3.chr19 C 0 C 0 e micMur3.chr14 26296108 739 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I a score=537266.000000 s hg38.chr9_KI270719v1_random 19896 92 + 176845 ---ATGAGCCCTTTAAAGGAATTATTTATTTTTATTGTTAAATCACCAAGGAAGG-GTTGAAACAGACAATAGAAATTAATGCCAAATGAGCTGAA s panTro5.chr4 135044772 92 + 194502333 ---ACGAGCCTTTTAAAGGAATTATTTATTTTTATTGTTAAATCACCAAGGAAGA-GTTGAAACAGACAAGAGAAATTAATGCCAAATGAGCTGAA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1647 92 + 11745 ---ACGAGCCTTTTAAAGGAATTATTTATTTTTATTGTTAAATCACCAAGGAAGA-GTTGAAACAGACAAGAGAAATTAATGCCAAATGAGCTGAA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25282 92 - 70559 ---ATGAGCCTTTTAAAGGAATTATTTATTTTTATTGTTAAATCACCAAGGAAGG-GTTGAAACAGACAATAGAAATTAATGCCAAATGAGCTGAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438699 92 - 115148730 ---ATGAGCCTTTTAAAGGAATTATTTATTTTTCTTGTTAAATCACCAAGGAAGA-GTTGAAACAGACAATAGAAATTAATGCCAAATGAGCGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380676 92 + 190429646 ---AAGAACCTTTGAAAGGGATGATTTATTTTTGTTGTTAAATCATCAAGGAAGA-GTTGAAACAGACAATATAAATTAATGCCAAATGAGCTGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899362 92 + 189454096 ---AAGAACCTTTGAAAGGGATGATTTATTTTTGTTGTTAAATCATCAAGGAAGA-GTTGAAACAGACAATATAAATTAATGCCAAATGAGCTGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890608 92 - 40319822 ---AAGAACCTTTGAAAGGAATGATTTATTTTTGTTGTTAAATCATCAAGGAAGA-GTTGAAACAGACAATATAAATTAATGCCAAATGAGCTGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444822 92 - 9219162 ---AAGAATCTTTGAAAGGAATGATTTATTTTTGTTGTTAAATCATCAAGGAAGA-GTTGAAACAGACAATATTAATTAATGCCAAATGAGCCGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970279 92 + 135778131 ---AAGAACCTTTGAAAGGAATGATTTATTTTTGTTGTTAAATCATCAAGGAAGA-GTTGAAACAGACAATATAAATTAATGCCAAATGAGCTGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736639 92 - 3013352 ---AAGAACCTTTGAAAGGAATGATTTATTTTTGTTGTTAAATCATCAAGGAAGA-GTTGAAACAGACAATATAAATTAATGCCAAATGAGCTGAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5967848 92 + 8656713 ---AAGAACCTTTGAAAGGAATGATTTATTTTTGTTGTTAAATCACCAAAGAAGA-GTTGAAACAGACAATATAAATTAATGCCAAATGAGCTGAA i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44008749 94 - 53741614 atgaagga--tttaaaataggttttttgttgttgttgtgaaagcacctaagcagaggtttagaaagaccatggaaattaatacaaaatgagtcaag i canFam3.chr19 C 0 C 0 e micMur3.chr14 26296108 739 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 917078 1735 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I e calJac3.chr3 129397389 79 - 190850796 I a score=34566.000000 s hg38.chr9_KI270719v1_random 19988 6 + 176845 AAAA-AA s panTro5.chr4 135044864 7 + 194502333 AAAATAA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1739 7 + 11745 AAAATAA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25374 6 - 70559 AAAA-AA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438791 7 - 115148730 AAAATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380768 7 + 190429646 AAAATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899454 7 + 189454096 AAAATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890700 7 - 40319822 AAAATAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444914 7 - 9219162 AAAATAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970371 7 + 135778131 AAAATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736731 7 - 3013352 AAAATAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5967940 7 + 8656713 AAAATAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397468 5 - 190850796 AAAAT-- i calJac3.chr3 I 79 C 0 s canFam3.chr19 44008843 7 - 53741614 aaaatca i canFam3.chr19 C 0 C 0 e micMur3.chr14 26296108 739 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 917078 1735 - 3201129 I e aotNan1.NW_018507635v1 14887953 96 + 15034901 I e cebCap1.NW_016107420v1 4036967 100 - 6311556 I e saiBol1.JH378129 6481105 82 - 25294431 I a score=231237.000000 s hg38.chr9_KI270719v1_random 19994 22 + 176845 ATG-------TGTTGCAATTAAGTTGGGA s panTro5.chr4 135044871 22 + 194502333 ATG-------TGTTGAAATTGAGTTGGGA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1746 22 + 11745 ATG-------TGTTGAAATTGAGTTGGGA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25380 22 - 70559 ATG-------TGTTGCAATTGAGTTGGGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438798 22 - 115148730 ATG-------TGTTGAAACTGAGTTGGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380775 22 + 190429646 ATG-------TGTTGAAATTGAGTTGGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899461 22 + 189454096 ATG-------TGTTGAAATTGAGTTGGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890707 22 - 40319822 ATG-------TGTTGAAATTGAGTTGGGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444921 22 - 9219162 ATG-------TGTTGAAATTGAGTTGGGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970378 22 + 135778131 ATG-------TGTTGAAATTGAGTTGGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736738 22 - 3013352 ATG-------TGTTGAAATTGAGTTGAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5967947 22 + 8656713 ACG-------TGTTGAAATTGAGTTGGGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397473 29 - 190850796 ATGTGTATATTGTTGAAATTGAGTTGAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481187 22 - 25294431 ATG-------TGTTGAAACTGAGTTGAGA i saiBol1.JH378129 I 82 C 0 s cebCap1.NW_016107420v1 4037067 22 - 6311556 ATG-------TGTTGAAACTGAGTTGAGA i cebCap1.NW_016107420v1 I 100 C 0 s aotNan1.NW_018507635v1 14888049 22 + 15034901 ATG-------TGTTGAAACTGAGTTGAGA i aotNan1.NW_018507635v1 I 96 C 0 s canFam3.chr19 44008850 22 - 53741614 atc-------tgtcaaaactaagctgaga i canFam3.chr19 C 0 C 0 e micMur3.chr14 26296108 739 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 917078 1735 - 3201129 I a score=364232.000000 s hg38.chr9_KI270719v1_random 20016 39 + 176845 ATAAAAAGCTGAGGTGGCAAGAA-GAAAAG-CAAGGTTGGT s panTro5.chr4 135044893 39 + 194502333 ATAAAAAGCTGAGGTGGCAAGAA-GAAAAG-CAAGGTTGGC i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1768 39 + 11745 ATAAAAAGCTGAGGTGGCAAGAA-GAAAAG-CAAGGTTGGC i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25402 39 - 70559 ATAAAAAGCTGAGGTGGCAAGAA-GAAAAG-CAAGGTTGGC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438820 39 - 115148730 ATAAAAAGCTGAGGTGGCAAGAA-GAAAAG-CAAGGTTGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380797 39 + 190429646 ATAAATAGCTGAGGTGGCAAGAA-GAAAAG-AAAGGTTGGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899483 39 + 189454096 ATAAATAGCTGAGGTGGCAAGAA-GAAAAG-AAAGGTTGGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890729 39 - 40319822 ATAAATAGCTGAGGTGGCAAGAA-GAAAAG-AAAGGTTGGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444943 39 - 9219162 ATAAATAGCTGAGGTGGCAAGAA-GAAAAG-AAAGGTTGGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970400 39 + 135778131 ATAAATAGCTGAGGTGGCAGGAA-GAAAAG-AAAGGTTGGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736760 39 - 3013352 ATATATAGCTGAGGTGGCAAGAA-GAAAAG-AAAGGTTGGC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5967969 40 + 8656713 ATAAATAGCTGAGGTGGCAAGAATAAAAAA-AAAGGTTGGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397502 37 - 190850796 ATAAATAGCTGAGGTGGCAAGAA-AAAAA---AGGGTTGGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481209 37 - 25294431 ATAAATAGCTGAGGTGGCAAGAA-AAGAA---AGGGTTAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037089 35 - 6311556 ATAAATAG--GAGGTGGCAAGAA-AAAAA---AAGGTTGGT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14888071 36 + 15034901 ATAAATAGCTGAGTTGGAAAGAA-AAAAA---A-GGTTGGT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26296847 40 - 93316391 ataaatagctgaggtggcaagaa-aaaagatcaaggctggt i micMur3.chr14 I 739 C 0 s canFam3.chr19 44008872 37 - 53741614 ataaacagtt-aggaggtaagaa-aaaat--tcaggtcagt i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 917078 1735 - 3201129 I a score=379738.000000 s hg38.chr9_KI270719v1_random 20055 29 + 176845 ATATTTTTAAAGAACTCTATAATGAATAA s panTro5.chr4 135044932 29 + 194502333 ATATTTTTAAAGAACTCTATAATGAATAA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1807 29 + 11745 ATATTTTTAAAGAACTCTATAATGAATAA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25441 29 - 70559 ATATTTTTAAAGAACTCTATAATGAATAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438859 29 - 115148730 ATATTTTTAAAGAAATCTATAATGAATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380836 29 + 190429646 ATATTTTTAAAGAAATCTATAATGAATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899522 29 + 189454096 ATATTTTTAAAGAAATCTATAATGAATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890768 29 - 40319822 ATATTTTTAAAGAAATCTATAATGAATAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4444982 29 - 9219162 ATATTTTTAAAGAAATCTATAATGAATAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970439 29 + 135778131 ATATTTTTAAAGAAATCTATAATGAATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736799 29 - 3013352 ATATTTTTAAAGAAATCTATAATGAATAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968009 29 + 8656713 ATATTTTTAAAGAAATCTATAATGAATAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397539 29 - 190850796 ATATTTTAAAAGAAATCTATAATGAATAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481246 29 - 25294431 ATATTTTTAAAGAAATCTATAATGAATGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037124 29 - 6311556 ATATTTTTAAAGATATCTATAATGAATAA i cebCap1.NW_016107420v1 C 0 I 14 s aotNan1.NW_018507635v1 14888107 29 + 15034901 ATATTTTTAAAGAAATCTATAATGAATAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26296887 29 - 93316391 gtatttttaaagaaatctataagggaaaa i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 918813 29 - 3201129 aTATTTTTAAAGAAGTCTATAATGgaaaa i otoGar3.GL873702 I 1735 C 0 s canFam3.chr19 44008909 28 - 53741614 gtattttt-aagaagagtacaaaggagaa i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=135128.000000 s hg38.chr9_KI270719v1_random 20084 11 + 176845 TGTTTTGAAGA s panTro5.chr4 135044961 11 + 194502333 TGTTTTGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1836 11 + 11745 TGTTTTGAAGA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25470 11 - 70559 TGTTTTGAAGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438888 11 - 115148730 TGTTTTGAAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380865 11 + 190429646 TATTTTGAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899551 11 + 189454096 TATTTTGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890797 11 - 40319822 TATTTTGAAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445011 11 - 9219162 TATTTTGAAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970468 11 + 135778131 TATTTTGAAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736828 11 - 3013352 TATTTTGAAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968038 11 + 8656713 TATTTTGAAGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397568 11 - 190850796 TGTTTTGAAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481275 11 - 25294431 TGTTTTGAAGA i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14888136 11 + 15034901 TGTTTTGAAGA i aotNan1.NW_018507635v1 C 0 I 23 s micMur3.chr14 26296916 11 - 93316391 tgttttgaaga i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 918842 11 - 3201129 tatttagaaga i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44008937 11 - 53741614 tgtcttaaaga i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e cebCap1.NW_016107420v1 4037153 14 - 6311556 I a score=628682.000000 s hg38.chr9_KI270719v1_random 20095 85 + 176845 GGAAGAAATTTTCAACAATTTGAAATGCTGCTGAGACTTTGGGAAATGTGAATGGTGCCCACGTAGAAGTTATTGACAGTCATTG s panTro5.chr4 135044972 85 + 194502333 GGGAGAAATTTTCAATAATTTGAAATGCTGCTGAGACTTTGGGAAATGTGAATGGTGCCCACGTAGAAGTTATTGATGGCCATTA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1847 85 + 11745 GGGAGAAATTTTCAATAATTTGAAATGCTGCTGAGACTTTGGGAAATGTGAATGGTGCCCACGTAGAAGTTATTGATGGCCATTA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25481 84 - 70559 GGAAGAAATTTTCAACAATTTGAAATGCTGCTGAGACTTTGGGAAATGTGAATGGTGCCCACGTAGAAGTTATTGACA-TCATTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438899 85 - 115148730 AGAAGAAATTTTCAACAATTTGAAATGCTGCTGACACTTTGGGAAATGTGAATGGTGCCCATGTAGAAGTTACTGATGATCATTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380876 85 + 190429646 GGAAGAAGTTGTCAACAATTTGAAATGCTACTGAGACTTTGGGAAATATGAATGGTGCCCATGTAGAAGTTGTTGATGGTCATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899562 85 + 189454096 GGAAGAAGTTGTCAACAATTTGAAATGCTACTGAGACTTTGGGAAATATGAATGGTGCCCATGTAGAAGTTGTTGATGGTCATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890808 85 - 40319822 GGAAGAAGTTGTCAACAATTTGAAATGCTACTGAGACTTTGGGAAATATGAATGGTGCCCATGTAGAAGTTGTTGATGGTCATTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445022 85 - 9219162 GGAAGAAGTTGTCAACAATTTGAAATGCTACTGAGACTTTGGGAAATATGAATGGTGCCCATGTAGAAGTTGTTGATGGTCATTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970479 85 + 135778131 GGAAGAAGTTGTCAACAATTTGAAATGCTACTGAGACTTTGGGAAATACGAATGGTGCCCATGTAGAAGTTGTTGATGGTCATTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736839 85 - 3013352 GGAAGAAGTTGTCAACAATTTGAAATGCTACTGAGACTTTGGGAAATACGAATGGTGTCCATGTAGAAGTTGTTGATGATCATTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968049 85 + 8656713 GGAAGAAGTTGTCAACAATTTGAAATGCTACTGAGACTTTGGGAAATATGAATGGTGCCCATGTAGAAGTTGTTGATGGTCATTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397579 23 - 190850796 ------AGTTATCAAC--------------------------------------------------------TTGATGATCATCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481286 20 - 25294431 ------AGTTATCAAC--------------------------------------------------------T---TCATCATCA i saiBol1.JH378129 C 0 C 0 s micMur3.chr14 26296927 85 - 93316391 ggaggaagttgtcaactatttaaaacgctgctgaaactttagaaaatgtaaagagtgcctgtatggaagttatttgcggtcatta i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 918853 85 - 3201129 ggacgatgtcatcaactatttaaaatgctgctgatacttcagaaaatgtgaagagttcccatacagaagttattggtggtcatta i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44008948 85 - 53741614 ggagaaaattgtcaagtatttgaaatgttactgaggcttcggggagtgtgaagagtgcccacatagaagttagtggcggtcatta i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e aotNan1.NW_018507635v1 14888147 23 + 15034901 I e cebCap1.NW_016107420v1 4037153 14 - 6311556 I a score=3526587.000000 s hg38.chr9_KI270719v1_random 20180 292 + 176845 AAACAACACTCCC-TTTAGCATTATGTATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATCTAAAA--A--CTTATTGGAAACACAAGAAATGCAACATGAACTACAATAACCATCCATTTCAATAAA-ATTAGAGgatttcaggttcaggtcatga---taaagta---------gcacaaactcacaccctgaagttggctataaaagctgggcaaaatatgttagacaattattggaagacacgggagaacaatcaaTGTATACAGAGCTTGAG s panTro5.chr4 135045057 292 + 194502333 AAACAACACTCCC-TTTAGCATTATGTATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATCTAAAA--A--CTTATTGGAAACACAAGAAATGCAACATGAGCTATAATAACCATCCATTTCAATATATGTTAGAGGATTTCAGGTTCAGGCCATGA---TAAAGTA---------GCACAAACTCACACCCTGAAGTTGGCTATAAAAGC-GGGGAAAATATGTTAGACAACTGTTGGAAGACACTGGAGAAGAATCAATGTATACAGAGCTTGAG i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 1932 292 + 11745 AAACAACACTCCC-TTTAGCATTATGTATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATCTAAAA--A--CTTATTGGAAACACAAGAAATGCAACATGAGCTATAATAACCATCCATTTCAATATATGTTAGAGGATTTCAGGTTCAGGCCATGA---TAAAGTA---------GCACAAACTCACACCCTGAAGTTGGCTATAAAAGC-GGGGAAAATATGTTAGACAACTGTTGGAAGACACTGGAGAAGAATCAATGTATACAGAGCTTGAG i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25565 292 - 70559 AAACAACACTCCC-TTTAGCATTATGTATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATCTAAAA--A--CTTATTGGAAACACAAGAAATGCAACATGAACTATAATAACCATCCATTTCAATAAA-ATTAGAGGATttcaggttcaggccatga---taaagta---------gcacaaactcacaccctgaagttggctataaaagctgggcaaaatatgttagacaactgttggaagacactggagaacaatcaatgtatacagagcttgag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90438984 292 - 115148730 AAACAACTCTCCC-TTTAGCATTATGCATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATCTAAAA--A--TTTATTGGAAACACAAGAAATGCAGCATGAACTATAATAACCATCCATTTCAATTAT-GTTAGAGGATTTCAGGTTCAGGCCATGA---TAAAGCA---------GCACAAGCTCACACCCTGAAGTTGGctataaaagctgggcaaaatatgttagacaactgttggaagacactggagaacagtcaatgtacacagagcttgag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131380961 293 + 190429646 AAACAACACTCCC-TTTAGCATTATGAATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATTGAAAA--G--CTCATTGGAAACACAAGAAATACAACATGAACTATAATAACCATCCCTTTCAATATATATTAGAGAatttcaggttcaggccatga---taaagta---------gcacaaactcacaccctgaagttggctataaaaactgggcaaaatatgttagacaactattggaagacactgcagaacaatcaaTCTATACAGAGCTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899647 293 + 189454096 AAACAACACTCCC-TTTAGCATTATGAATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATTGAAAA--G--CTCATTGGAAACACAAGAAATACAACATGAACTATAATAACCATCCCTTTCAATATATATTAGAGAatttcaggttcaggccatga---taaagta---------gcacaaactcacaccctgaagttggctataaaaactgggcaaaatatgttagacaactattggaagacactgcagaacaatcaaTCTATACAGAGCTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34890893 293 - 40319822 AAACAACACTCCC-TTTAGCATTATGAATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATTGAAAA--G--CTCATTGGAAACACAAGAAATACAACATGAACTATAATAACCATCCCTTTCAATATATATTAGAGAatttcaggttcaggccatga---taaagta---------gcacaaactcacaccctgaagttggctataaaaactgggcaaaatatgttagacaactattggaagacactgcagaacaatcaaTCTATACAGAGCTTGAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445107 293 - 9219162 AAACAACACTCCC-TTTAGCATTATGAATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATCGAAAA--A--ATCATTGGAAACACAAGAAATACAACATGAACTATAATAACCATCCCTTTCAATATCTATTAGAGAATTTCAGGTTCAGGCCACGA---TAAAGTA---------GCacaaactcccaccctgaagttggctataaaaactgggcaaaatatgttagacaactattggaagacactgcagaACAATCCATCTATACAGAGCTTGAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970564 293 + 135778131 AAACAACACTCCC-TTTAGCATTATGAATAAGAAACTAGATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATTGAAAA--A--CTCATTGAAAACACAAGAAATACAACATGAACTATAATAACCATCCCTTTCAATATATATTAGAGAatttcaggttcaggccatga---taaagta---------gcacaaactcacaccctgaagttggctataaaaactgggcaaaatatgttagacaactattggaagacactgcagaacaatcaaTCTATACAGAACTTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2736924 293 - 3013352 AAACAACACTCCC-TTTAGCATTATGAATAAGAAACTAGATTAGAATGAAACAAACGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATTGAAAA--A--CTCATTGGAAACACAAGAAATGCAACATGAACTATAATAACCATCCCTTTCAATATATATTAGAGAATTTCAAGTTCAGGCCATGA---TAAAGTA---------GCACAAACTCACACCCTGAAGTTGGCTATAAAAACTGGGCAAAATATGTTAGACAACTGTTGGAAGACACTGCAGAACAATCAATCTATACAGAGCTTGAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968134 293 + 8656713 AAACAACACTCCC-TTTAGCATTATGAATAAGAAACTATATTAGAATGAAACAAATGGATTCTTAATTCCAGAATTGTGGAGAAATAGAAAATCAAAAA--A--CTCATTGGAAACACAAGAAATGAAACATGAACTATAATAACCATTCCTTTCAATATATATTAGAGAatttcaggttcaggccatga---taaagta---------gcacaaactcacaccctgaagttggctataaaaactgggcaaaatatgttagacaactgttggaagacactgcagaacgatcaaTCTATACAGAGCTTGAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397602 301 - 190850796 AAACAATACTCCC-ATTAGCATTATGGATAAGAAACTAGGTTAGAAAGAAACAAATGGATTCTTCATTCCAGAATTGGGGAGAAATAGAACATCTAAAA--A--CTAATTTGAAATACAAGAAATGCAACATGAACTATAATAACCATTCATATCAATATATATTAGAGGATTTCAGGTTCAGGCCACAA---TAAAATGCCATAGAGTGAACAAACTCACA-CGTGAAGTTGACTATAAAAACTATGCAAAATATGTTTGACAACTATTGGAAGGTACTGGAGAACAACCAATCTATACAGAGCTTGAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481306 289 - 25294431 AAACAATACTCCC-ATTAGCATTATGGATAAGAAACTAGATTAGAAAGAAACAAATGGGTTCTTCATTCCAGAATTAGGGGGAAATAGAACATCTAAAA--A--CTAATTGGAAAAACAAGAAATGCAACATGAACTATAATAACCATCC------------ATTTGAGGATTTCAAGTTCAGGCCACAA---TAATGTGTCATACAATGAACAAACTCACA-CATGAAGTTGACTATAAAAACTATGCAAAATATGTTTGACAGCTGTTGGAAGGTACTGGAGAACAACCAATCTATGCAGAGCTTGAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037167 297 - 6311556 AAACAACACTCCC-ATTAGCATTATGGATAAGAAAGTAGATTAGAAAG----AAATGGATGCTTCATTCCAGAATTAGGGAGAAATAGAACATCTAAAA--A--CTAATTGGAAACACAAGAAATGCAACACGAACTATAATAACCATCCATTTCAATATATATTAGAGGATTCCAGGTTCAGGCCACAA---TAAAGTGTCATACAGTGAACAAACTCACA-TGTGAAGTTGACTATAAAAACTATGCAAAATATGTTTGACAACTGTTGTAAGGTACTGGAGAACAACCAATGTATACAGGGCTTGAG i cebCap1.NW_016107420v1 I 14 I 12 s aotNan1.NW_018507635v1 14888170 301 + 15034901 AAACAACACTCCC-ATTAGCATTATGGATAAGAAACTAGATTAGAAAGAAACAAATGGATTCTTCATTCCAGAATTATGGAGAAACAGAAAATCTAAAA--T--CTCATTGGAAACACAAGAAATGCAACATGAAATATAGTAACTATCCATTTCAATATATATTAGAGGATTTCAGGTTCAGGCCACAA---TAAAGTGTCATACAGTGAACAAACTCACA-CATGAAGTTGACTATAAAATCTATGCAAAATATGTTTGACAACTGTTGGAAGGTACTGGAGAACAACCAATCTATACAGAGCTTGAG i aotNan1.NW_018507635v1 I 23 C 0 s micMur3.chr14 26297012 304 - 93316391 aaagaacactttcaattagaattatggttaagaaactagattagaatgagATAAATGGGTCCTTAATTCCAGAATTATGGCAAAAT-AAAAACCTAAAACCC--CTCATTAGAAACACAAGAAACAAAACGTAAACTATAACAATTATCCATTTAAATACATATAAGAGGATTTTAGGttcaggccatga---tggagtagcgtatggtaagcaaattcataccctgaagttggctataaaagctgggcaaaatatatcagacaactgtcgtaaggaactggagaacatccaacgcatacagagcttgag i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 918938 306 - 3201129 aaagaacactttc-attagaattatggttaaggaactagattagaatgagATAAATAGGTCTTTACttccagaattatggcaaaatgaaaaacctaaaattt--ctcattagaaacacaagaaatgcaacataaactataacaactatccatttaaatatgtattagagcATTTCAGGTTCAGGCCATAAAAGAGGAGTAGTAGACGGTGAACAAACTCACTCCCTGAAGTTGCCTAAAAATGCCAGGCCAACTCCATCAGACACCTGTGGTaaggcactggagaaaaccc-atgtgcacagagctggag i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44009033 297 - 53741614 aaataacactgtc-attaagattatgggtaa-aaactagattagaatgagATAAATGGGTCTTTAAttccagaatggtggcagaatagaaaatctaaaa--actctcattagaaacacaagaaatgctacataaactataaccattatccacttaaatAGGTGGTAGAGgatttcaggttcaggccatga---tagagtagctcctagtgaataaacccacacactgaagacggctgtaaaagttgagtggaatatacagaacaactgtttgaagg------AGAACTGCCGACCCACACAAGGCCTGAG i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=321951.000000 s hg38.chr9_KI270719v1_random 20472 33 + 176845 TGGGATTATTATTAAAAAGAAATAATTATAGAC s panTro5.chr4 135045349 33 + 194502333 TGGGATTATTATTAAAAAGAAATAATTATAGAC i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2224 33 + 11745 TGGGATTATTATTAAAAAGAAATAATTATAGAC i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25857 33 - 70559 tggGATTATTATTAAAAAGAAATAATTATAGAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439276 33 - 115148730 tggGATTATTATTAAAAAGAAATAATTATAGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381254 33 + 190429646 AGGGATTATTATTAAAAAGAAATAATTACAGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899940 33 + 189454096 AGGGATTATTATTAAAAAGAAATAATTACAGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891186 33 - 40319822 AGGGATTATTATTAAAAAGAAATAATTACAGAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445400 33 - 9219162 AGGGATTATTATTAAAAAGAAATAATTATAGAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970857 33 + 135778131 AGGGATTATTATTAAAAAGAAATAATTATAGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737217 33 - 3013352 AGGGATTATTATTAAAAAGAAATAATTATAGAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968427 33 + 8656713 AGAGATTATTATTAAAAAGAAATAATTATAGAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397903 30 - 190850796 AGaa---attattaaaaataaataattatacac i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481595 33 - 25294431 AGaaattattattaaaaataaataaCTATACAC i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14888471 33 + 15034901 AGAAATTATTATTAAAAATAAATAATTATACAC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26297316 33 - 93316391 gggTTTTATTAATAAGAAGAAATAAACACACAA i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 919244 33 - 3201129 gggattcattatttagaagaaataaacatacaa i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44009330 33 - 53741614 AGGATTTGTTATTAAGAGGATACAAGCCCACAA i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e cebCap1.NW_016107420v1 4037464 12 - 6311556 I a score=414158.000000 s hg38.chr9_KI270719v1_random 20505 36 + 176845 TATAAATTACATTCACTCAGACG-TTTTTCCTCTAAT s panTro5.chr4 135045382 36 + 194502333 TACAAATTACATTCACTCAGATG-TTTTTCCTCTAAT i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2257 36 + 11745 TACAAATTACATTCACTCAGATG-TTTTTCCTCTAAT i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25890 36 - 70559 TATAAATTACATTCACTCAGACG-TTTTTCCTCTAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439309 36 - 115148730 TATAAATTACATTCACTCAGATG-TTTTTCCTCTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381287 36 + 190429646 TATAAATTACATTCACTCAGATG-TTTTTCCTCTAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130899973 36 + 189454096 TATAAATTACATTCACTCAGATG-TTTTTCCTCTAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891219 36 - 40319822 TATAAATTACATTCACTCAGATG-TTTTTCCTCTAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445433 36 - 9219162 TATAAATTACATTCACTCAGATG-TTTTACCTCTAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970890 36 + 135778131 TATAAATTACATTCACTCAGATG-TTTTTCCTCTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737250 36 - 3013352 CATAAATTACATTCACTCAGATG-TTTTTCCTCTAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968460 36 + 8656713 TATAAATTACATTCACTCAGATG-TTTTTCCTCTAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397933 21 - 190850796 tataaattatattCACTCAGA---------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481628 36 - 25294431 TATAAATTATATTCACTCAGATG-TTTTTCCTCTAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037476 36 - 6311556 TATAAATTATATTCACTCAGATG-TTTTTCCTCTAAT i cebCap1.NW_016107420v1 I 12 C 0 s aotNan1.NW_018507635v1 14888504 36 + 15034901 TATAAATTATATTCACTCAGATG-TTTTTCCTCTAAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26297349 35 - 93316391 AATAAATTACATTCACCCAGATA--TTTTCCTCTGAC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 919277 37 - 3201129 gataaattgcattcacctaggtatttttttccctgag i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44009363 33 - 53741614 AATCCATTACATTA---TAGATG-TTTTTTCCTTGAC i canFam3.chr19 C 0 I 131 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=154032.000000 s hg38.chr9_KI270719v1_random 20541 16 + 176845 AACATTTCCCAAATAG s panTro5.chr4 135045418 14 + 194502333 AACATTTCCCAAAT-- i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2293 14 + 11745 AACATTTCCCAAAT-- i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25926 16 - 70559 AACATTTCCCAAATAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439345 16 - 115148730 AACATTTCCCAAATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381323 16 + 190429646 AACATTTCTCAAATAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900009 16 + 189454096 AACATTTCTCAAATAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891255 16 - 40319822 AACATTTCTCAAATAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445469 16 - 9219162 AACATTTCTCAAATAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970926 16 + 135778131 AACATTTCTCAAATAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737286 16 - 3013352 AACATTTCTCAAATAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968496 16 + 8656713 AACATTTCTCAAATAC i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6481664 16 - 25294431 AGCATTTCCCAAATAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037512 16 - 6311556 AGCGTTTCCCAAATAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14888540 16 + 15034901 AGCATTTCCCAAATAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26297384 16 - 93316391 AGCGTTTCCCAAATAC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 919314 16 - 3201129 agcgtttcccaaatag i otoGar3.GL873702 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1688961 14 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44009396 131 - 53741614 I e calJac3.chr3 129397954 0 - 190850796 C a score=2018630.000000 s hg38.chr9_KI270719v1_random 20557 179 + 176845 TGATGTGAAGAA-AGAAAGCATATACAGAAAGTGAAATTTTActgtgtt---------gaggtgacagagattag---agttcagagtatct-agt----gtgtatggggctcatgagacaa-atttccaagaaggaggtaaccacagagagagagcctgaatatctgcatacaaatgtcccttaa-------------------------gtg-tGGCCAGTA s panTro5.chr4 135045432 175 + 194502333 ----GTGAAGAA-AGAAAGCATACACAGAAAGTGAAATTTTActgtgtt---------gaggggacagagattag---agttaagagtatcc-agt----gtgtatggggctcacaagacca-atttccaagaaggaggtaagcacagagagagagcctgaatatctgcatacaaatgccccttaa-------------------------gtg-tGGCCAGTA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2307 175 + 11745 ----GTGAAGAA-AGAAAGCATACACAGAAAGTGAAATTTTActgtgtt---------gaggggacagagattag---agttaagagtatcc-agt----gtgtatggggctcacaagacca-atttccaagaaggaggtaagcacagagagagagcctgaatatctgcatacaaatgccccttaa-------------------------gtg-tGGCCAGTA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 25942 179 - 70559 TGATGTGAAGAA-AGAAAGCATACACAGAAAGTGAAATTTTActgtgtt---------gaggtgacagagattag---agttcagagtatct-agt----gtgtatggggctcacgagacaa-atttccaagaaggaggtaaccacagagagagagcctgaatatctgcatacaaatgccccttaa-------------------------gtg-tGGCCAGTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439361 179 - 115148730 TGATGTGAGGAA-AGAAAGCATACACAGAAAGTGAAATTTTActgtgtt---------gaggtgacagagattag---agttcagagtatcc-agt----gtgtgtggggctcacgagacaa-atttccgacaaggtggtaaccacagagagagagcctgaatatctgcatacaaatgccccttaa-------------------------gtg-tGGCCAGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381339 188 + 190429646 TAATGTGAAGAA-AGAAAGCATACACAGAAAGTGAAGTTTTACTGTGTTGAGGTGACAgaggtgacagagattag---agttcagagtattc-agt----gtatatggggctcatgagacaa-atttccaagaaggaggtaaccacacagagagagCCTGAATATCTGGATACAAATGCCCTTTAA-------------------------GTA-TGGCTGGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900025 188 + 189454096 TAATGTGAAGAA-AGAAAGCATACACAGAAAGTGAAGTTTTACTGTGTTGAGGTGACAgaggtgacagagattag---agttcagagtattc-agt----gtatatggggctcatgagacaa-atttccaagaaggaggtaaccacacagagagagCCTGAATATCTGGATACAAATGCCCTTTAA-------------------------GTA-TGGCTGGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891271 188 - 40319822 TAATGTGAAGAA-AGAAAGCATACACAGAAAGTGAAGTTTTACTGTGTTGAGGTGACAgaggtgacagagattag---agttcagagtattc-agt----gtatatggggctcatgagacaa-atttccaagaaggaggtaaccacacagagagagCCTGAATATCTGGATACAAATGCCCTTTAA-------------------------GTA-TGGCTGGTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445485 188 - 9219162 TAATGTGAAGAA-AGAAAGCATACACAGAAAGTGAAGTTTTACTGTGTTGAGGTGACAgaggtgacagagattag---agttcagagtattc-agt----gtatatggggctcatgagacaa-atttccaagaaggaggtaaccacacagagagagCCTGAATATCTGGATACAAATGCCCTTTAA-------------------------GTG-TGGCTGGTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78970942 188 + 135778131 TAATGTGAAGAA-AGAAAGCATACACAGAAAGTGAAGTTTTACTGTGTTGAGGTGACAgaggtgacagagattag---agttcagagtattc-agt----gtatatggggctcatgagacaa-atttccaagaaggaggcaaccacacagagagagCCTGAATATCTGGATACAAATGCCCCTGAA-------------------------GTG-TGGCTGGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737302 187 - 3013352 T-ATTTGAAGAA-AGAAAGCATACACAGAAAGTGAAGTTTTACTGTGTTGAGGTGACAGAGGTGACAGAGATTAC---AGTTCAGAGTATTC-AGT----GTATATGGGGCTCATGAGACAA-ATTTCCAAGAAGGAGGTAACCACACAGAGAGAGCCTGAATATCTGGATACAAATGCCCTTTAA-------------------------GTG-TGACTGATA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968512 188 + 8656713 TGATATGAAGAA-AGAAAGCATGCACAGAAAGTGAAGTTTTACTGTGTTGAGGTGACAGAGGTGACAGAGATTAG---AGTTCAGAGTATTC-AGT----GTATATGGGGCTCGTGAGACAA-ATTTCCAAGAAGGAGGTAACCACACAGAGAGAGTCTGAATATCTGGATACAAATATCCTTTAA-------------------------GTG-TGGCAGGTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129397954 177 - 190850796 TGACGTGAAGAA-AGAAAGCATGAACAGAAAGTGAAGTTTT--AGTgtt---------gaggtgacagagattag---aatttggagtattg-agc----ccgtatggggctcatgagacaa-atttccaagaaggaggtaaccacaaagagagagcctaaatatctccatacaaatgtcctttaa-------------------------gtg-tggccagta i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481680 179 - 25294431 TGATGTGAAGAA-AGAAAGCATGCACAGAAAGTGAAGTTTTACAGTgtt---------gaggtgacagagattag---aatttggagtatca-agc----ctgtatggggctcatgagacaa-atttccaagaaggaggtaaccacagagagagagcctaaaTACCTCCATACAAATGTTTTTTAA-------------------------GTG-TGGCCAGTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037528 179 - 6311556 TGATGTGAACAC-AGAAAGCATGCACAGAAAGTGAAGTTGTACAGTGTT---------GAGGTGACAGAGATTAG---AATTTGGAGTATCG-AGC----CTGTATGGGGCTCATGAGACAA-ATTTCCAAGAAGGAGGTAACCACAGTGAGAGATCCTAAATATCTCCATACAAATGTCCTTTAA-------------------------GTG-TGGCCAGTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14888556 179 + 15034901 TGATGTGAAGAA-AGAAAGCATGCATAGAAAGTGAAGTTTTACAGTGTT---------GAGGTGACAGAGATTAG---AATTTGGAGGATTG-AGC----CTGTATGGGGCTCATGAGACAA-ATTTCCAAGAAGGAGGTAACCACAGAGAGATAGCCTAAATATCTCCATAGAAATGTCCTTTAC-------------------------GTG-TGGCCAGTA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26297400 186 - 93316391 TGATGTGAAGAA-AGAAAGTATAAGCATAAAGTGAGGTTTTACTACGTT---------GAGGAGACAGAGATCAGAATAGTGTGGAGTATCTGATGTGATGTGTCTGGAGCTCATGATACA--ATTTTCAAGAAAGAGGTAACCACAGAGAAGAAGGCCAATTATCTGCATACAAATGCCCTTTAA-------------------------ATG-TGGCCGTTA i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 919330 202 - 3201129 tgacgtgaagaagagacatcataagcagaaagtgaagttttactatg-------------agagacagagatcagaggagtttgtagcaccc-ata----gTGTTTTAATCTCATGATAAAACATTTTTAGG---GAAGTAATCGCAGAGAAAGAGGCTAAATACCTGCATATAAATATCCTCCAAATAAATGCCAAATACTACCAAATACATG-TGGCTGGTA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1688975 174 + 5974691 TGATGTGAAGAA-AGAGGTCCTACACAAAAAGTGAAGTTTTACTCTGTT---------GAGGAAGTAGAGATTAG---TATCTGGA-TGTCC-AAT----GTGACTTGGATTCATGGGACAA-ATTCCCAAAATGTATG-AATCACAGAGA---AGGTCAACTATCTACATATAAAGATCCTTCAA-------------------------GTGTTGACAAGC- i dasNov3.JH569232 I 14 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44009396 131 - 53741614 I a score=1717925.000000 s hg38.chr9_KI270719v1_random 20736 129 + 176845 TCAAAGATATGTATGCACAAGGTGAGACGTCAAGAAG-CCTAGCAGAAATCAATAAATGGGAGGTTGGAG---------TGCTGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGGTTCAAACACTG s panTro5.chr4 135045607 129 + 194502333 TCAAAGATATGTATGCACAAGGTGAGACGTCAAGAAG-CCTAGCAGAAATCAATAAATGGGAGGTTGGAG---------TCCCGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGTTTCAAACACTG i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2482 129 + 11745 TCAAAGATATGTATGCACAAGGTGAGACGTCAAGAAG-CCTAGCAGAAATCAATAAATGGGAGGTTGGAG---------TCCCGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGTTTCAAACACTG i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 26121 128 - 70559 TCAAAGATATGTATGCACAAGGTGAGACGTCAAGAAG-CCTAGCAGAAATCAATAAATGGGAGGTTGGAG---------TGCTGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAG-AAGAGGTTGTGGTTCAAACACTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439540 129 - 115148730 TCAAAGATATGTATGCACAAGGTGAGACATCAAGAAG-CCTAGCAGAAATCAATAAATGGGAGGTTGGAG---------TGCTGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGGTTCAAACACTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381527 128 + 190429646 TCCAAGATAT-TATGCACAAGGTGAGACTTCAAGAAG-CCTAGCAGAAATCATTAAATGGGAGGTTGGAG---------TGCTGAGTTCAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGGTTCAAGCACTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900213 128 + 189454096 TCCAAGATAT-TATGCACAAGGTGAGACTTCAAGAAG-CCTAGCAGAAATCATTAAATGGGAGGTTGGAG---------TGCTGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGGTTCAAGCACTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891459 128 - 40319822 TCCAAGATAT-TATGCACAAGGTGAGACTTCAAGAAG-CCTAGCAGAAATCATTAAATGGGAGGTTGGAG---------TGCTGAGTTCAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGGTTCAAGCACTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445673 129 - 9219162 TCAAAGATATATATGCACAAGGTGAGACTTCAAGAAG-CCTAGCAGAAATCAATAAATGGGAGGTTGGAG---------TGCTGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGGTTCAAGCACTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971130 129 + 135778131 TCAAAGTTATATATGCACAAGGTGAGACTTCAAGAAG-CCTAGCAGAAATCAATAAATGGGAGGTTGGAG---------TGCTGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGGTTCAAGCACTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737489 129 - 3013352 TCAAAGGTATATATGCACAAGGTGAGACTTCAAGAAG-CCTAGCAGAAATCAATAAATGGGAGGTTGGAG---------TGCTGAGTTTAGATTTCAGCTAGCGGTTTAGAGAAGAAAGAGGTTGTGGTTCAAGCACTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968700 129 + 8656713 TCAAAGATATATATGCACAAGGTGAGACTTCAAGAAG-CCTAGCAGAAATCAATAAATGGGAGGTTGGAG---------TGCTGACTTTAGATTTCAACTAGTGGTTTAGAGAAGAAAGAGGTTTTGGTTCAAACACTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398131 126 - 190850796 tc-aaaatacacatacaaaaggtgagacttcaagaag-cctagcagaaaacAATAAATGGGAGGTTGGAG---------TGTTGAGTTTAAATTTCAGCTAGTGATTTAGAGAAGAAAGAGGTTGTGGTTCAA--ACAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481859 129 - 25294431 TCAAAAATACACATACAAAAGGTGAGCCTTCGAGAAG-CCTAGCAGAAAACGATAAACAGGAGGTTGGAG---------TGTTGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTATGGTTCAGACACAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037707 129 - 6311556 TCAAAGATATACATACAAAAGGTGAGACTTCAAGAAG-CCTAGCAGAAAACAATAAATGGGAGGTTGGAG---------TGTTGAGTTTAGATTTCAGCTAGTGCTTTAGAGAAGAAAGAGGTTGTGGTTCAAACACAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14888735 132 + 15034901 TCAAAAATACACATACAAAAGGTGAGACTTCAAGAAG-CCTAGCAGAAAACAATAAATGGGAGGTTGGAGTGT------TGTTGAGTTTAGATTTCAGCTAGTGGTTTAGAGAAGAAAGAGGTTGTGGTTCAAACACAG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26297586 129 - 93316391 TCAAAGACATACATGCACAAGATGAGTCTTCAAGAAG-CCTAGCAGAAAACAATAATTGGGAGGCTAGAG---------TACTGAGCTTAGATTTCAGTTGTTGCTTGAGAGAAGAAAGAAATTGTAGTTTAAACACTG i micMur3.chr14 C 0 I 825 s otoGar3.GL873702 919532 138 - 3201129 TCGAAGATTTATCTGCACTAGATGAGTCTTCAAGAGG-CCTGGCAGAAAGCAACAAATGGGAGGCAGGAGAGGCTGGACTACGGAGCTTTGATTTTAGTTGGTGGTTGAGAGAAGAAAGAAGGTGTCATTTAAACAGTG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44009527 129 - 53741614 TCAAAGATGCGCATGTGCAAGACAGTGCTTTAATTAGCCCCAACAGAAAACAATGGATGGGAAGTGGAAG---------AGCTGAGCTTACATTTTAGCTGGTG-CTTGGAGGAGAACGGAGGAGTGGTTTGAACACTG i canFam3.chr19 I 131 C 0 s dasNov3.JH569232 1689149 128 + 5974691 TTATAAATGTATATACACAAGGTGAGATTTCAAGAAG-CCCAGCAGATAACAATGA-TGGGAGGGTGAAG---------CATTAAGCTTAGATTTCAGCTAGTGGTGCTAAGGAGAGGGAGGTTGTAGTGCAAACACTG i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=58944.000000 s hg38.chr9_KI270719v1_random 20865 5 + 176845 GTAAT s panTro5.chr4 135045736 5 + 194502333 GTAAT i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2611 5 + 11745 GTAAT i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 26249 5 - 70559 GTAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439669 5 - 115148730 GTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381655 5 + 190429646 GTAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900341 5 + 189454096 GTAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891587 5 - 40319822 GTAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445802 5 - 9219162 GTAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971259 5 + 135778131 GTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737618 5 - 3013352 GTAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968829 5 + 8656713 GTAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398257 5 - 190850796 GTAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481988 5 - 25294431 GTAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037836 5 - 6311556 GTAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14888867 5 + 15034901 GTGAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 919670 5 - 3201129 ATGAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44009656 3 - 53741614 --ACA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1689277 5 + 5974691 ATAAT i dasNov3.JH569232 C 0 I 11353 e micMur3.chr14 26297715 825 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=49723.000000 s hg38.chr9_KI270719v1_random 20870 4 + 176845 TACA s panTro5.chr4 135045741 4 + 194502333 TATA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2616 4 + 11745 TATA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 26254 4 - 70559 TATA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439674 4 - 115148730 TATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381660 4 + 190429646 TATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900346 4 + 189454096 TATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891592 4 - 40319822 TATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445807 4 - 9219162 TATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971264 4 + 135778131 TATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737623 4 - 3013352 TATA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968834 4 + 8656713 TATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398262 4 - 190850796 TATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481993 4 - 25294431 TATA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037841 4 - 6311556 TATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14888872 4 + 15034901 TATA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 919675 4 - 3201129 TATA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44009659 4 - 53741614 CACA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26297715 825 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1689282 11353 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=124098.000000 s hg38.chr9_KI270719v1_random 20874 10 + 176845 GAGGATGAGA s panTro5.chr4 135045745 10 + 194502333 GAGGATGAGA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2620 10 + 11745 GAGGATGAGA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 26258 10 - 70559 GAGGATGAGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439678 10 - 115148730 GAGGATGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381664 10 + 190429646 GAGGATGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900350 10 + 189454096 GAGGATGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891596 10 - 40319822 GAGGATGAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445811 10 - 9219162 GAGGATGAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971268 10 + 135778131 GAGGATGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737627 10 - 3013352 GAGGATGAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968838 10 + 8656713 GAGGATGAGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398266 10 - 190850796 GAGGGTGAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6481997 10 - 25294431 GAGGGTGAGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037845 10 - 6311556 GAGGGTGAGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14888876 10 + 15034901 GAGGGTAAGA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 919679 10 - 3201129 ACAACTGAGA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44009663 10 - 53741614 GGGGCTGACA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1700635 10 + 5974691 GAGAGTGATA i dasNov3.JH569232 I 11353 C 0 e micMur3.chr14 26297715 825 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=2044469.000000 s hg38.chr9_KI270719v1_random 20884 153 + 176845 TGGGAGTGAGAAACTATATGGCTAAATGTGGTCATTCTTCA-GGTTTTAGCTTTTATGCAGGGTGCTATATGCTGGTTGCTTCCAA-CACTGAAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT s panTro5.chr4 135045755 153 + 194502333 TGGGAGTGAGAAACTGTATGGCTAAATGTGGTCATTCTTCA-GGTTTTAGCTTTTATGCAGGGTGCTATATGCTGGTTGCTTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2630 153 + 11745 TGGGAGTGAGAAACTGTATGGCTAAATGTGGTCATTCTTCA-GGTTTTAGCTTTTATGCAGGGTGCTATATGCTGGTTGCTTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 26268 153 - 70559 TGGGAGTGAGAAACTATATGGCTAAATGTGGTCATTCTTCA-GGTTTTAGCTTTTATGCAGGGTGCTATATGCTGGTTGCTTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439688 153 - 115148730 TGGGAGTGAGAAACTATATGGCTAAATGTGGTCATTGTTCA-GGTTTTAGCTTTTATGCAGGGAGCTATATGCTAGTTGCTTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381674 153 + 190429646 TGGGAGTGAGAAACTATATGGCTAAATGTGGTCATTGTTCA-GGTTTTAGCTTTCATGCAGGGTGCTATATGCTGGTTGCCTCAAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900360 153 + 189454096 TGGGAGTGAGAAACTATATGGCTAAATGTGGTCATTGTTCA-GGTTTTAGCTTTCATGCAGGGTGCTATATGCTGGTTGCCTCAAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891606 153 - 40319822 TGGGAGTGAGAAACTATATGGCTAAATGTGGTCATTGTTCA-GGTTTTAGCTTTCATGCAGGGTGCTATATGCTGGTTGCCTCAAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445821 153 - 9219162 TGGGAGTGAGAAACTATATGGCTAAATGTGGTCATTGTTCA-GGTTTTAGCTTTCATGCAGGGTGCTATATGCTGGTTGCCTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACTATGAATAGGCATAAGATGAAAGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971278 152 + 135778131 TGGGAGTGAGAAACTATACGGCTAAATGCGGTCATTGTTCA--GTTTTAGCTCTCATGCAGGGTGCTATATGCTGGTTGCCTCCAA-CACTGTAAAAGTTATTATTTAATTACGT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737637 153 - 3013352 TGGGAGTGAGAAACTATATGGCTAAATGTGGTCATTGTTCA-GGTTTTAGCTTTCATGCAGGGTGCTATATGCTGGTTGCCTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5968848 153 + 8656713 TGGGAGTGAGAAACTATATGGTTAAATGTGGTCATTGTTCA-GGTTTTAGCTTTTATGCAGGGTGCTATATGCTGGTTGCTTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ACGTATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398276 144 - 190850796 TGGGAGTGAGAAACTACAT---TAAATATGGACATTGTTCA-GATTTTAGGTTTTATTCAGGGTGTTCTATGCAGGTTGCTTCCAA-CACTGTAA-----GTTATTT-ATTACTT-ACATATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6482007 150 - 25294431 TGGGAGTGAGAAACTACAT---TAAACATGGACGTTGTTCA-GATTTTAGGTTTTATTCAGGATGTTTTATGCAGGTTGCTTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ACATATAAAAGATGACCATGAATAGGCATAAAATGAAAGT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4037855 150 - 6311556 TGGGAGTGAGAAACTACAT---TAAATGTGGGCATTGTTCA-GATTTTAGGTTTTATTCAGGGTGTTCTATGCAGGTTGTTTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ATGTATAAAAGATGACCATGAATAGGCATAAGATGAAAGT i cebCap1.NW_016107420v1 C 0 I 762 s aotNan1.NW_018507635v1 14888886 150 + 15034901 TGGGAGTGAGAAACTACAT---TAAATATAGACATTGTTCA-GATTTTAGGTTTTATTCAGGGTGTTCTATGCAGGTTGCTTCCAA-CACTGTAAAAGTTATTATTTAATTACCT-ACGTATAAAAGATGACCATGAATAGGCATAAGACGAAAGT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26298540 153 - 93316391 TGGGAGTAAGAAACTACATGGTTAAACATGGTTATTGTTCA-GGTTTTAGCTTTCATGTGGGGTGGTGTATTCTGGGTGCTCCCAA-CACTGTAAAAGTTATTATTTTATTCCCT-ACATATAAAACCTGGCCATGAATAAACATAGGATAAAAGT i micMur3.chr14 I 825 C 0 s otoGar3.GL873702 919689 154 - 3201129 TGGGAGTAAGAAACTTCATGGTTAAACATGGTCATTATTCA-GGTTTTGGCTTTCATATGAGGTAGAATATTCTGGGTGCTCACAAGTACTGTAAAAGTTATTATTTCATTTTCT-ACATATAAAAGCTGACCATGAATAAACATAGGATGAAAGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44009673 154 - 53741614 CGGGAGTGGGAAACTGCATGGTGAGATGTGGTTATTCCCCCCGGGTTCAGCTTTCATGTGCAGTAGTGCATTCTGGGTGCTGCTCA-CAATGTTTAAGTGATTATTTAATTAACT-ACGTATAAAAGCTGACCTTGAATAGGCATAGGAAGAAAGC i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1700645 145 + 5974691 TGGGAGTGGGAAACTAGGTGATTAGATGTAGTTATTGTCCA--CTTTTAACTTTCATGTAGGGTGATGTGTTCTGGGTCCTTCTAA-C----TGAA----ATTATTCAATTAACTAACATATAAAAGCTAACTTTGAAGAAACATACATTGAAATG i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=181477.000000 s hg38.chr9_KI270719v1_random 21037 12 + 176845 ATG----TCATTAATC s panTro5.chr4 135045908 12 + 194502333 ATG----TCATTAATC i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 2783 12 + 11745 ATG----TCATTAATC i panPan2.chrUn_NW_014014795v1 C 0 M 6167 s gorGor5.CYUI01001450v1 26421 12 - 70559 ATG----TCATTAATC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439841 12 - 115148730 ATG----TCATTAATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381827 12 + 190429646 ATG----TCATTAATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900513 12 + 189454096 ATG----TCATTAATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891759 12 - 40319822 ATG----TCATTAATC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445974 12 - 9219162 ATG----TCATTAATC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971430 12 + 135778131 ATA----TCATTAATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737790 12 - 3013352 ATG----TCATTAATC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5969001 12 + 8656713 ATG----TCATTAATC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398420 16 - 190850796 ATGTCATTCATTAATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6482157 12 - 25294431 ATG----TCATTAATC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4038767 12 - 6311556 ATG----TCATTAATC i cebCap1.NW_016107420v1 I 762 C 0 s aotNan1.NW_018507635v1 14889036 12 + 15034901 ATG----TCATTAAAC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26298693 12 - 93316391 ATG----TCATTAATT i micMur3.chr14 C 0 I 1 s otoGar3.GL873702 919843 12 - 3201129 GTG----TCATTAATC i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44009827 12 - 53741614 ATG----TCATAAATC i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1700790 12 + 5974691 ATG----TCATAAACC i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=2047643.000000 s hg38.chr9_KI270719v1_random 21049 177 + 176845 ----AAAATGATGATTAATTCAATTCTCTATAATTGAGATTCAATTAAAAAGaatatta-ttcatcacattcacagagtaaatgag--aaaaa----------tcacataatttcagtagatgcagaTACGTTAAGATCTGTATCCTAACAGATATTgataca-aagaagtatttgataaaattcatcattaatt s panTro5.chr4 135045920 176 + 194502333 ----AAAATGATGATTAATTCAATTCTCTATAATTGAGATTCAATTAAAAAGaatatta-ttcatcacattcacagagtaaatgag--aaaaa----------tcacatcatttcagtagatgcagataca-taagatctgtatcctaacagatattgataca-cagaagtatttgacaaaattcatcattaatt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 26433 176 - 70559 ----AAAATGATGATTAATTCAATTCTCTATAATTGAGATTCAATTAAAAAGaatatta-ttcatcacattcacagagtaaatgag--aaaaa----------tcacataatttcagtagatgcagaTACA-TAAGATCTGTATCCTAACAGATATTgataca-aagaagtatttgataaaattcatcattaatt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90439853 176 - 115148730 ----AAAATAATGATTAATTCAATTCTCTATAATTGAGATTCAATTGAAAAGaatatta-ttcatcacattcacagagtaaatgag--aaaaa----------tcacatcatttcagtagctgcagataca-taagatctgtttcctaacagatattgataca-aagaagtatttgataaaattcatcattaatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131381839 171 + 190429646 ----AAAATAATGATTCATTCAATTCTCTATAATTGAGATTCAATTAAAAAGaatatta-ttcatcacattcacaaaataaatgag--aaaaa----------tcacatcatttcagcagatgcacataca-taagatctgtatcctaacagatattgataca-aataagtatttgataaaattcatc---a--t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900525 173 + 189454096 ----AAAATAATGATTCATTCAATTCTCTATAATTGAGATTCAATTAAAAAGaatatta-ttcatcacattcacaaaataaatgag--aaaaa----------tcacatcatttcagcagatgcacataca-taagatctgtatcctaacagatattgataca-aataagtatttgataaaattcatc---aatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891771 176 - 40319822 ----AAAATAATGATTCATTCAATTCTCTATAATTGAGATTCAATTAAAAAGaatatta-ttcatcacattcacaaaataaatgag--aaaaa----------tcacatcatttcagcagatgcaCATACA-TAAGATCTGTATCCTAACAGATATTGATACA-AATAAGTATTTGATAAAATTCGTCATTAATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4445986 176 - 9219162 ----AAAATAATGATTCATTCAATTCTCTATAATTAAGATTCAATTAAAAAGaatatta-ttcatcacattcacaaaataaatgag--aaaaa----------tcacatcatttcagcagatgcacataca-taagatctgtatcctaacagatattgataca-aataagtatttgataaaattcatcattaatt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971442 176 + 135778131 ----AAAATAATGATTCATTCAATTCTCTATAATTGAGATTCAATTAAAAAGaatatta-ttcatcacattcacaaaataaatgag--aaaaa----------tcacatcatttcagcagatgcacatacg-taagatctgtatcctaacagatattgataca-aataagtatttgataaaattcatcattaatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737802 176 - 3013352 ----AAAATAATGATTCATTCAATTCTCTATAATTAAGATTCAATTAAAAAGaatatta-ttcatcacattcacaaaataaatgag--aaaaa----------tcacatcatttcagcagatgcacataca-taagatctgtatcctaacagatattgataca-aataagtatttgataaagttcatctttaatt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5969013 176 + 8656713 ----AAAATAATGATTAATTCAATTCTCTATAATTGAGATTCAATTAGAAAGaatatta-ttcatcacattcacaaagtaaatgag--aaaaa----------tcacatcatttcagcagatgcagataca-taagctctgtatcctaacagatattgataca-aataagtatttgataaaattcatcattaatt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398436 175 - 190850796 ----AAAATAATGATTAATTCAGTTATC----ATTGAGATTCAATTAAAAAGTATATTATttcatcacattcacagagtcaatgagaaaaaaa----------tcacatcatttcagtagatgcagaTAca-taagatctgtatcctaacagatattggtaca-aagaatgaattgataaaattcatcagcaatt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6482169 170 - 25294431 ----AAAATAATGATTAATT--GTTATC----ATTGAGATTCAATTAAAAAGTATATTATttcatcacattcacagagtaaatgag--aaaaa----------tcacatcatttcagta-atgcagataca-taagatctgtatcctaacagatattggtaca-aagaagtatttgataaaattcatcagtaatt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4038779 173 - 6311556 ----AAAATAATGATTAATTCAGTTATC----ATTGAGATTCAATTAAAAAGTATATTATttcatcacattcacagagtaaatgag--aaaaa----------tcacatcatttcagtagaggcagataca-taagatctgtatcctaacagatattggtaca-aagaagtatttgataaaattcatcagtaatt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14889048 173 + 15034901 ----AAAATAATGATTAATTCAGTTATC----ATTGAGATTCAATTAAAAAGTATATTATttcatcacattcacagagtaaatgag--aaaaa----------tcacaccatttcagaagatgcagataca-taagatctgtatcctaacagatattggtaca-aagaagtatttgataaaattcatcagtaatt i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26298706 175 - 93316391 ----AGGATAATGATGTATTCAATTCTCTATAATTAACATCCAGTTAAAAAGTatatta-ttcactacattcacagattaaatgag--aaaaa----------tcacattgtttcagtagatgcagataca-taagatctgtatcttaacaggtatagatac--aaaaattatttgataaaattcatcattaatt i micMur3.chr14 I 1 I 1034 s otoGar3.GL873702 919856 160 - 3201129 ----GGGATAATGATGTATCTAATTCTCTATAATTGAGATCCAATTAAAAAGTatatta-ttcaccacattcacagattaaatgag--aaaaa----------tcacatcatttcagtagatgcagataca-taaga----------------tatagataca-aaaaagtatttgataaaattcatcattaatt i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44009840 173 - 53741614 ----AGGGTAATGATTAATGTAATTTTCTGTAATTGAGACCTAATTAAAAAGTatataa-ttcaccacattcacagattaaatgag--aaaaa----------tcacatcacctcaaca----cagatgca-taagaTATGTATCGTAACAGATATATGTACAGAAGAAACATTTGATGCAACTTATTATGAATC i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1700802 181 + 5974691 AAGGATAATTATAATTGTCATAATTCTGTACAATTGAGATCCAATTGAAAATTATATTA-TTC---ACATTAACAGACTAAAAGAG--AAAAACTAGAGCCTCTTGAAGcatattgacacatacagataca-tattatatgtttattaatagatat------a-aagaagtattttaattaatttatcattaatt i dasNov3.JH569232 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=62910.000000 s hg38.chr9_KI270719v1_random 21226 18 + 176845 tac-----tgtatat----atatatgc s panTro5.chr4 135046096 18 + 194502333 tac-----tatatat----atatatgc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 26609 18 - 70559 tac-----tgtatat----atatatgc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90440029 16 - 115148730 tac-------tatat----atatgtgc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131382010 20 + 190429646 tattt---tatatat----atacatac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900698 20 + 189454096 tattt---tatatat----atacatac i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891947 20 - 40319822 TATTT---TATATAT----ATACATAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4446162 22 - 9219162 tatttta-tatatat----atacatac i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971618 20 + 135778131 tattt---tttatat----atatatac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737978 20 - 3013352 tattt---tatatat----atacatac i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5969189 20 + 8656713 tgcta---tatatat----atatatgc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398611 16 - 190850796 tattt-------tat----atatatgc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6482339 16 - 25294431 tattt-------tat----atatatgc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4038952 16 - 6311556 tattt-------tat----atatatgc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14889221 16 + 15034901 tattt-------tat----atatatgt i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 920016 12 - 3201129 ------------catg---atatatat i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44010013 18 - 53741614 -----CATAAAATAT----ACATAAGC i canFam3.chr19 C 0 I 7882 s dasNov3.JH569232 1700983 12 + 5974691 ---------------catgatatatac i dasNov3.JH569232 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=1664540.000000 s hg38.chr9_KI270719v1_random 21244 197 + 176845 tcttattaaact--------------------------------------------------------------------------aggatttaaaaggcacttaatta-------agttgataaa---gtgtatcttttgaaatcctataaacaatatg--ttatgacataataatgtgggaatgttagaagacttgcttttaa---------------------------------------------------------------------acctgggaa---------caag-aagagattctctgttatt-------------ttcctat-gctgctgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc s panTro5.chr4 135046114 197 + 194502333 tcttattaaact--------------------------------------------------------------------------aggacttaaaaggcacttcatta-------agttgataaa---gtgtatcttttgaaatcctataaacaatatc--ttatgacataataatgtgggaatgttagaagacttgcttttaa---------------------------------------------------------------------acctgggaa---------caag-aagagattctctgttatt-------------ttcctac-gctgctgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 26627 197 - 70559 tcttattaaact--------------------------------------------------------------------------aggatttaaaaggcacttcatta-------agttgataaa---gtgtatcttttgaaatcctataaacaatatc--ttatgacataataatgtgggaatgttagaagacttgcttttaa---------------------------------------------------------------------acctgggaa---------caag-aagagattctctgttatt-------------ttcctat-gctgctgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90440045 197 - 115148730 tgtcattaaact--------------------------------------------------------------------------aggatttaaaaggcacttcatta-------agttgataaa---gtgtatcttttgaaatcctataaacaatatc--ttatgacataataatgtgggaacgttagaagacttgcttttaa---------------------------------------------------------------------acctgggaa---------caag-aagagattctctgttatt-------------ttcctat-gctgctgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i nomLeu3.chr7b C 0 I 279 s rheMac8.chr5 131382030 203 + 190429646 ttttattaaact--------------------------------------------------------------------------aggatttaaaaggcac-tcattagttgatgagttgataaa---gtgtatcttttgaaatcctataaacaatagc--ttatgacataataatgtggaaatgttagaagacctgtttttag---------------------------------------------------------------------acctgggaa---------caag-aagagattctctgttatt-------------ttcctat-gctactgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900718 203 + 189454096 ttttattaaact--------------------------------------------------------------------------aggatttaaaaggcac-tcattagttgatgagttgataaa---gtgtatcttttgaaatcctataaacaatagc--ttatgacataataatgtggaaatgttagaagacctgtttttaa---------------------------------------------------------------------acctgggaa---------caag-aagagattctctgttatt-------------ttcctat-gctactgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34891967 277 - 40319822 TTTTATTAAACTAGGATTTAAAAGGCACTCATTAGTTGACGAGTTGATAAAGTGTATCTTTTGAAATCCTATAAACATATTAAACTAGGATTTAAAAGGCAC-TCATTAGTTGACGAGTTGATAAA---GTGTATCTTTTGAAATCCTATAAACAATAGC--TTATGACATAATAATGTGGAAATGTTAGAAGACCTGTTTTTAA---------------------------------------------------------------------ACCTGGGAA---------CAAG-AAGAGATTCTCTGttatt-------------ttcctat-gctactgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4446184 196 - 9219162 ttttattaaact--------------------------------------------------------------------------aggatttaaaaggcac-tcatta-------agtggataaa---gtgtatcttttgaaatcctgtaaacaatagc--ttatgacataatagtgtggaaatgttagaagacctgtttttaa---------------------------------------------------------------------acctgggaa---------caag-aagagattctctgttatt-------------ttcctat-gctactgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971638 196 + 135778131 ttttattaaact--------------------------------------------------------------------------aggatttaaaaggcac-tcattt-------agttgataaa---gtgtatcttttgaaatcctataaacaatatc--ttatgacataataatgtggaaatgttagaagacctgtttttaa---------------------------------------------------------------------acctgggaa---------caag-aagagattctctgttatt-------------ttcctat-gctagtgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2737998 196 - 3013352 ttttattaaact--------------------------------------------------------------------------agtatttaaaaggcac-tcatta-------agttgataaa---gtgtatcttttgaaatcctataaacaatagc--ttatgacataatagtgtggaaatgttagaagacctgtttttaa---------------------------------------------------------------------acctgggaa---------caag-aagagattctctgttatt-------------ttcctat-gatactgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5969209 196 + 8656713 ttttattaaact--------------------------------------------------------------------------aggatttaaaaggcac-tcatta-------agttgataaa---gtgtatcttttgaaatcctataaacaatacc--ttatgacataataacctggaaatgttagaagacctgcttttaa---------------------------------------------------------------------acctggaaa---------caag-aagagattctctgttatt-------------ttcctat-gctactgtaacaaattgc--------------------------------------------------------------------------------------------cacaaaatgggt--------------------------------------------------------------------------agcttaa-------agc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398627 197 - 190850796 tcttattaaact--------------------------------------------------------------------------agaattt-aaaggcacttcatta-------acttgatataa-tatatatcttttgaaatccaataaacaatatc--ttatgacataataatgtgggtatgttaaaagacctgctcttaa---------------------------------------------------------------------acctgggaa---------caagaaaaaaattctctgtta-t-------------ttcctat-gttgctgtaat-aattgc--------------------------------------------------------------------------------------------cataaactgggt--------------------------------------------------------------------------agcttaa-------agc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6482355 197 - 25294431 tcttattaaact--------------------------------------------------------------------------agaatttaaaaggtacttcatta-------acttgatata---atatatcttctgaaatccaataaaaaatatc--ttatgacataataatgtgggtatgttaaaagacctgcttttaa---------------------------------------------------------------------acctgggaa---------caag-aaaaTATTCTCtgttatt-------------ttcctac-attgttgtaacaaattgc--------------------------------------------------------------------------------------------cataacctgggt--------------------------------------------------------------------------agctcaa-------agc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4038968 198 - 6311556 ccttattaaact--------------------------------------------------------------------------agaatttaaaaggtacttcatta-------acttgatataa-tatatcttttttgaaatccaataaacaatatc--ttatgacataatagtgtgggtatgttaaaagacctgcttttaa---------------------------------------------------------------------acctgggaa---------caag-aaaagattctctgtta-t-------------ttcgtat-gttcctataacaaattgc--------------------------------------------------------------------------------------------cctaaactgggt--------------------------------------------------------------------------agcttaa-------agc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14889237 194 + 15034901 tcttattaaact--------------------------------------------------------------------------agaatttaaaaggcacttcatta-------acttgatata---atatatcttttgaaatccaataaacaatatc--ttat-acataataatgtgggtatgttaaaagacctgcttttaa---------------------------------------------------------------------acctgggaa---------caag-aaaagattctc--ttatt-------------ttcctac-attgctgtaacaaattgc--------------------------------------------------------------------------------------------cataaactgggt--------------------------------------------------------------------------agcttaa-------agc i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 920028 194 - 3201129 tcttattaaact--------------------------------------------------------------------------cagatttaaaaggcacttcatta-------acctgataaa---aaac-tcttttgaaatcctataattaatgcc--taaggacatgatga---ggaaatgttagaagacctccctttaa---------------------------------------------------------------------atctgggaa---------cagg-aagagaTGCTATGCtaat-------------ttcctctggctgctgtaacaaattac--------------------------------------------------------------------------------------------tacaaactgggt--------------------------------------------------------------------------agcttaa-------agc i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1700995 459 + 5974691 ---tattttaca--------------------------------------------------------------------------accatgaaaaaggcagttcatta-------acttgataaaagtgtgtatattttgaaatcctgtaataaacatcttttatgacataat---gtagaaatgttagaagaaatccctttaaTTTTTGTGTTTTTttgtgtgtgtgtgtcttctcttcttctttccttctctaggattcactggcattcagtcctggggatttccaatgtgaa-gagaggttccttgtcacttgagctacctcagttcctg--gtttctgttgcatcttgctttgactctccccttcatctctctttttgttgtgtcatcatcttgctatgtggtgttttgtgtgggcttggctctccatgcaggcactggctcaccacatgggccctgggtcaccaggcaggcatatcttttgccagaaggccaaagatcaaacctgggtcctcctatatggtatgggagctcaatcacttgagc i dasNov3.JH569232 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I a score=2704359.000000 s hg38.chr9_KI270719v1_random 21441 304 + 176845 aacacagactttttc-------------------------------------------tcttatacttct----------------------------------------------------------gaaggccaaaaattcataatcagtatcagtggtctaaaaccaaggtgtgatcagcaccctattttttccagagaactcaggggagagtaattctagaaattattccagaaa---cgcagcttctagaactacatttcttgtctcataggccccttcttctatctt-caaagatagca---gcgtata---attttcaaatatttctccacttccatgatcacataacct---agattctatgtcaaatctccctctccctcactcttataaggacacttaagattgcatt s panTro5.chr4 135046311 304 + 194502333 aacacagactttttc-------------------------------------------tcttatagttct----------------------------------------------------------gaaggccagaaattcataatcagtatcagtggtctaaaaccaaggtgtgatcagcattctattttttccagagaactcaggggagagtaattctagaaattattccagaaa---tgcagcttctagaactacatttcttgtctcaaaggccccttcttctatctt-caaagatagca---gtgtata---attttcaaatatttctccacttccatgatcacataacct---agattctatatcaaatctccctctccatcacttttacaaggacacttaagattgcatt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 26824 303 - 70559 aacacagactttttc-------------------------------------------tcttatagttct----------------------------------------------------------gaaggccaaaaattcataatcagtatcagtggtctaaaaccaaggtgtgatcagcaccctattttttccagagaactcaggggagagtaattctagaaattattccagaaa---cgcagcttctagaactacatttcttgtctcaaa-gccccttcttctatctt-caaagatagca---gcttata---attttcaaatatttctccacttccatgatcacataacct---agattctatgtcaaatctccctctccatcactcttataaggacacttaagattgcatt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90440521 304 - 115148730 aaaaaagactttttc-------------------------------------------tcttatagttct----------------------------------------------------------gaaggccagaagttcataatcagtatcagtggtctaaaaccaaggtgtgatcagcattctattttttccagagaactcaggggagactaattctagaaattattccagaaa---tgcagcttctagaactacatttcttggctcaaagatcccttcttctatttt-caaagagagca---gtgtata---attttcaaatatttctccacttacatgatcacataacct---agattctgtgtcaaatctccctctccatcactcttataaggacacttaagattgcatt i nomLeu3.chr7b I 279 C 0 s rheMac8.chr5 131382233 301 + 190429646 aacacagacattttc-------------------------------------------tcttacagttct----------------------------------------------------------gaaggccagaaattcataatcagcatcagtagtctaaaaccaaggtgtgatcagcattctattttttccagagaactcacgggagagtaattctagaaattactccagaaa---cgcagcttctagaactacatttcttggctcagtggccccttcttctatatt-caaagacagca---gcatata---attttcaaatatttctccacttccatgatcacacaacct---agattctgtgtcaaatctccctttccatcactcttataaggacacttatg---gcatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130900921 301 + 189454096 aacacagacattttc-------------------------------------------tcttacagttct----------------------------------------------------------gaaggccagaaattcataatcagcatcagtagtctaaaaccaaggtgtgatcagcattctattttttccagagaacttacgggagagtaattctagaaattactccagaaa---tgcagcttctagaactacatttcttggctcagtggccccttcttctatatt-caaagacagca---gcatata---attttcaaatatttctccacttccatgatcacacaacct---agattctgtgtcaaatctccctttccatcactcttataaggacacttatg---gcact i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34892244 301 - 40319822 aacacagacattttc-------------------------------------------tcctacagttct----------------------------------------------------------gaaggccagaaattcataatcagcatcagtagtctaaaaccaaggtgtgatcagcattctattttttccagagaactcacgggagagtaattctagaaattactccagaaa---ggcagcttctagaactacatttcttggctcagtggccccttcttctatatt-caaagacagca---gcatata---attttcaaatatttctccacttccatgatcacacaacct---agattctgtgtcaaatctccctttccatcactcttataaggacacttatg---gcatt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4446380 301 - 9219162 aacacagacatttcc-------------------------------------------tcttacagttct----------------------------------------------------------gaaggccagaaattcataatcagcatcagtagtctaaaaccacggtgtgatcagcattctattttttccagagaactcacgggagagtaattctagaaattactccggaaa---cgcagcttctaggactacatttcttggctcagtggccccttcttctatctt-caaagacagca---gcatata---attttcaaatatttctccacttccatgatcacacaacct---agattctgtgtcaaatctccctttccatcactcttataaggacacttacg---gcatt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78971834 301 + 135778131 aacacagacattttc-------------------------------------------tcttacagttct----------------------------------------------------------gaaggccagaaattcataattagcatcagtagtctaaaaccaaggtgtgatcagcattctattttttccagagaactcacgggagagtaattctagaaattactccagaaa---cacagcttctagaactacatttcttggttcagtggccccttcttctatctt-caaagacagca---gcatata---attttcaaatatttctccacttacatgatcacacaacct---agattctgtgtcaaatctccctttccatcactcttataaggacacttatg---gcatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2738194 301 - 3013352 aacacagacattttc-------------------------------------------tcttacagttct----------------------------------------------------------gaaggccagaaattcataatcagcatcagtagtctaaaaccaaggtgtgatcagcattctattttttccagagaactcacgggagagtaattctagaaattactccggaaa---cgcagcttctagaactacatttcttggctcagtggccccttcttctatctt-caaagacagca---gcatata---attttcaaatatttctccacttccatgatcacacaacct---agattctgtgtcaaatctccctttccatcactcttataaggacacttatg---gcatt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5969405 309 + 8656713 aacacagacattttc-------------------------------------------tcttacagttctga--------------------------------------------------aggccagaaggccagaaattcataatcagcatcagtagtctaaaaccaaggtgtgatcagcattctaatttttccagagaactcacgggagagtaattctggaaattattccagaaa---cgcagcttctagaactacatttcttggctcagtggccccttcttctatctt-caaagacagta---gcgtata---attttcaaatatttctccacttccatgatcacataacct---agattctgtgtcaaatctccctttccatcactcttataaggacacttatg---gcatt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129398824 303 - 190850796 aacacaaacattttc-------------------------------------------tcttatagttct----------------------------------------------------------gaagaccagaaattcataatcagtatcagtgggccaaaaccaaggtgtgaacagcacccagagtttttcagagaactcaggggagaataattctagaaattattccacaaa---tgcagcttctagaaatacatttcttggctta-tggcccattcctctatctt-caaagatagca---atatatc---attctcaattctttctccacttccatgatcacataactt---agattctgtgtcaaatctccctctccaatactcttataaggacacttatgattgcagt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6482552 299 - 25294431 aacacaaaccttttc-------------------------------------------ttttacagttct----------------------------------------------------------gaacgccagaaattcataatcagtatcagtgggccaaagccaaggtgtgaacagcaccc--tgtttttcagagaactc-ggggagagtaattctagaaattattccacaaa---tgcagcttctagaaatacacttcttggctca-tggcctgttcttctatctt-caaaggtagca---atatatc---attctcaattctttctccacttccataatcacataacct---agattctgtgtc-aatctcactctccaatactcttataaggacacttatgattgcagt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039166 303 - 6311556 aacacaaaccttttc-------------------------------------------tcttacagctct----------------------------------------------------------gaaggacagaaattcataatcagtattagtgggccaaaaccaaggtgtgaacagcacccaaagtttttcagagagctcaggggagagtaattctagaaattattccacaaa---tgcagcttctagaaatacatttcttgactca-tggcccgttcttctatctt-caaatatagca---atgtatc---attctcaattctttctccacttctatgatcacataaccg---agattctgtgtcaaatctccctctccaatactcttataaggacacttacgattgcagt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14889431 303 + 15034901 aacacaaaccttttc-------------------------------------------tctcatagttct----------------------------------------------------------gaaggccagaaattcataatcagtatcagtgggccaaaaccaaggtgtgatcagcacccaaattttgtcagagaattcaggggagaataattctagaaattattccacaaa---tgcagcttctagaaatacatttcttggcaca-tggcccattcttctatctt-caaagatagga---atatatc---attctcaattctttctccacttccatgatcacataacct---agattctgtgtcaaatctccctctctaatacttttataaggacacttacaattgcagt i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 920222 315 - 3201129 accacaagtattttc-------------------------------------------tctcacatttct----------------------------------------------------------tagggccagaaatccataatcagtgtcactgggtcaaaaccaagctgtgaacaggggcctgcttgttccacagactccagggaagaataattctagaaattatgctagaagaacagcagctaccagaactatatttcttggctca-tggccccttcttccatctg-caaattcagcatggacatctgaacatctttgagcctttttccacatccataatcacataaccttccacattctatgtgaaatctccttctccctcacttttatgagcacattggtgattgcatt i otoGar3.GL873702 C 0 I 754 s dasNov3.JH569232 1701454 394 + 5974691 --cacatccgcttccctccctttaatttctATGAACAAGAAATGATGCTGTGGCagtttcctatggctctgagaaattaccgtaaactagtaggttaaagcacctctaatttattttctctcagtttggaatgtcaggcatttgaaattgttttcactaggccaaaatcaaagtatcttaaggaccatgttccctccaaagtttctaatgga---taatcc----atttccttgccttt---tccagattctagaccagttttccttggctca-cggctccttcctccatcttccaaagtcagaa-----atatt---atcttcaaatctcaatctgctttcattgtcatattgccttc-tgtacctatgtcaaattttctcctacatcccttttataatgata--tgtgattccatt i dasNov3.JH569232 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I a score=212682.000000 s hg38.chr9_KI270719v1_random 21745 24 + 176845 tagagcccaccaagataattcatg s panTro5.chr4 135046615 24 + 194502333 tagagcccaccaagataattcatg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27127 24 - 70559 tagagcccaccaagataattcatg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90440825 24 - 115148730 tagagcccaccaagataattaatg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131382534 24 + 190429646 tagagatcaccaagataattcatg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130901222 24 + 189454096 tagagaccaccaagataattcatg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34892545 24 - 40319822 tagagaccacgaagataattcatg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4446681 24 - 9219162 tagagaccatcaagataattcatg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78972135 24 + 135778131 tagagatcaccaagataattcatg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2738495 24 - 3013352 tagagaccatcaagataattcatg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5969714 24 + 8656713 tagagaccaccaagataattcatg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399127 24 - 190850796 tagagctcaccaggataatccatg i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6482851 24 - 25294431 cggagcccaccaggataatccatg i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039469 24 - 6311556 tagagcccaccaagataatccatg i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14889734 24 + 15034901 tagagtccaccaggataatccatg i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1701848 24 + 5974691 cagggcacatccaaataattcagg i dasNov3.JH569232 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e otoGar3.GL873702 920537 754 - 3201129 I a score=1118540.000000 s hg38.chr9_KI270719v1_random 21769 127 + 176845 ataatct-tccatcacaaaattcttcacttattcacatctgcaagt-ctctttgccat-aaaggttacatttacaggtactaaggattaagacc-------------tgacatctcttgaggccattattcaccctaacacag s panTro5.chr4 135046639 128 + 194502333 ataatat-tccatcacaaaattcttcacttattcacatctgcaagt-ctctttgccataaaaggttacatttacaggtactaaggattaagacc-------------tgatatctcttgaagccattattcagcctaacacag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27151 126 - 70559 ataatct-tccatcacaaaattcttcacttactcacatctgcaagt-ctctttgccat--aaagttacatttacaggtactaaggattaagacc-------------tgacatctcttgagaccattattcagcctaacacag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90440849 128 - 115148730 ataatct-ttcctcacaaaattcttcacttattcacatctgcaagt-ctctttgccataaaaggttacatttacaggtactaaggattaggacc-------------tgtcatctcttgaggccattattcagcctaacacag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131382558 128 + 190429646 acaatat-tccatcacaaaattcttcacttaatcacatctgcaagt-ctctttgccataaaagattacatttacaggtactagggattaagacc-------------tgacatctcttgaggccattattcagcctaacacag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130901246 128 + 189454096 acaatat-tccatcacaaaattcttcacttaatcacatctgcaagt-ctctttgccataaaagattacatttacaggtactagggattaagacc-------------tgacatctcttgaggccattattcagcctaacacag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34892569 128 - 40319822 acaatat-tccatcacaaaattcttcacttaatcacatctgcaagt-ctctttgccataaaagattacatttacaggtactagggattaagacc-------------tgacatctcttgaggccattattcagcctaacacaG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4446705 128 - 9219162 acaatat-tccatcacaaaattcttcacttaatcacatctgcaagt-ctctttgccataaaagattacatttacaggtactagggattaagacc-------------tgacatctcttgaggccattattcagcctaacacag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78972159 128 + 135778131 acaatat-tccatcacaaaattcttcacttaatcacatctgcaagt-ctctttgccataaaagattacatttacaggtactagggattaagacc-------------tgacatctcttgaggccattattcagcctaacacag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2738519 128 - 3013352 acaataa-tccatcacaaaattcttcacttaatcacatctgcaagt-ctctttgccataaaagattacatttacaggtactagggattaagacc-------------tgacatctcttgaggccattattcagcctaacacag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5969738 128 + 8656713 gtaatat-tccatcacaaaattcttcacttaatcacatctgcaagt-ccctttgccataaaagattacatttacaggtattaaggattaagacc-------------tgacatctcttgaggccattattcagcctaacacag i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399151 108 - 190850796 attatct-tctctcacaaaattctttatttaatcacatctgcaatt-ctctttgccataaaaggtaatatttacaggtactaggg-ttaatacc-------------tgatatctctagaggTA------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6482875 140 - 25294431 ataatct-tctatcacaaaattctgtatttaatcacatctgcaatt-ctctttgccatgaaaggtaacatttacaggtactaggg-ctaataccctcgtattaatattgatatctctagaggccattattcagcctCATACAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039493 127 - 6311556 ataatct-tctatcacaaaattctttatttaatcacatctgcaatt-ccctttgccataaaaggtaacatttacaggtactaggg-ttaatacc-------------tgatatttctagagaccattattcagcctaatacaG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14889758 127 + 15034901 ataatct-tctatcacaaaattctttatttaatcacatctgcaatt-ctctttgccataaaatgtaacatttacagggactaggg-ttaatacc-------------tgatatctctagaggccattattcagcctaatacag i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 921291 122 - 3201129 ACAGTCT-Gctatctcaatattt----ctcaatcacttctgcaagt---ctgtaccatctgaggtagcatttatatgcccaggggattaggacc-------------tggatactctggaggccattatagcgcctaacataG i otoGar3.GL873702 I 754 C 0 s dasNov3.JH569232 1701872 125 + 5974691 atagtctccccatcttaagatcaattacttaatcacatctgtaaattctcttttgcctggaa-----cattcacaggctccaggaagaggatat-------------ggatacttttgggagacattatccagtctatcacaG i dasNov3.JH569232 C 0 I 2745 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I a score=939746.000000 s hg38.chr9_KI270719v1_random 21896 114 + 176845 atgtcctctcttgctgcttgttttacacattgtactTTTCTGAATA---cttt-tgagaaagtttgctctaaagaagaaaa-aaaagtagttctatatttgtgagacatgtagactgag s panTro5.chr4 135046767 114 + 194502333 atgtcctctcttgctgcttgttttacacattgtaATTTTCTGAATA---cttt-tgagaaagtttgctctaaagaagaaaa-aaaagtagttctatatttgtgagacatgtagactgag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27277 114 - 70559 acgtcctctcttgctgcttgttttacacattgtactTTTCTGAATA---cttt-tgagaaagtttgctctaaagaagaaaa-aaaagtagttctatatttgtgagacatgtagactgag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90440977 114 - 115148730 atgtcctctcttgctgcttgttttacacattgtactTTTCTGAATA---cttt-tcagaaagtttgctctaaagaagaaaa-aaaagtagttctatatttgtgagacgtgtagactgag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131382686 115 + 190429646 atgtcctctcttgctgcttgttttacacattgtactTTTTTGAATA---CTTT-TGAGAAAGTTTGCTCTAAAGAAGAAAATATAAGTAGTTCTAGATTTGTGAAACATGTAGACTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130901374 115 + 189454096 atgtcctctcttgctgcttgttttacacattgtactTTTTTGAATA---CTTT-TGAGAAAGTTTGCTCTAAAGAAGAAAATATAAGTAGTTCTAGATTTGTGAAACATGTAGACTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34892697 115 - 40319822 ATGTCCTCTCTTGCTGCTTGTTTTACACATTGTACTTTTTTGAATA---CTTT-TGAGAAAGTTTGCTCTAAAGAAGAAAATATAAGTAGTTCTAGATTTGTGAAACATGTAGACTGAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4446833 115 - 9219162 atgtcctcccttgctgcttgttttacacattgcacCTTTCTGAATA---CTTT-TGAGAAAGTTTGCTCTAAAGAAGAAAATATAAGTAGTTCTAGATTTGTGAGACATGTAGACTGAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78972287 115 + 135778131 atgtcctctcttgctgcttgttttacacattgtactTTTCTGAATA---CTTT-TGAGAAAGTTTACTCTAAAGAAGAAAATATAAGTAGTTCTATATTTGTGAGACATGTAGACTGAG i chlSab2.chr7 C 0 I 362 s manLeu1.NW_012103277v1 2738647 115 - 3013352 atgtcctcccttgctgcttgttttacacattgtactTTTCTGAATA---CTTT-TGAGAAAGTTTGCTCTAAAGAAGAAAATATAAGTAGTTCTAGATTTGTGAGACATGTAGACTGAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5969866 113 + 8656713 atgtcctctcttgctgcttgttttacacattgtac-tTTCTGAATA---CTTT-TGAGAAAGTTTGCTCTAAAGAAGAAAATATAAGTAGTTCTATATTTGTGAGATATGTAGACTGA- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399259 97 - 190850796 ------------------TCTTTTACACATTGTAATTTTCTGAATA---ttttttgagaaagtttggtctgaagaagaaaa-ataagtagttctatatttgtgagacatgtagactgaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483015 108 - 25294431 ATATCTTCTCTTGCTGCTTCTTTTACACATTGTGATTTTCTGAATA---TTCTTTGAGAAAGTTTGCTCTGAAGAAGACAA-ATAAGTAGATCTATATTTGTGAGACATGTA------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039620 97 - 6311556 ATGTCCCCTCTTGCTGCTTCTTTTACACATTGTAATTTTC--------------TGAGAAAGTTTGCTCTGAAGACGAAAA-ATAAGTAGTTCTATATTTTTGAGACATGTC------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14889885 115 + 15034901 atgtcctctcttgctgctgcttttacacattgtaATTTTCTGAATA---ttttttgagaaagtttgcactgaagaagaaaa-ataagtagttctgtatttgtgagacatgtagactgaa i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 921413 115 - 3201129 ATGTCCCCTCTCGCA---TCTCCTAAGCACTGTGCTTTTTTGAATAAAGTCTG-TGAGAAGGTTTGCTCTGAAAAAGAAAAAAGAAATAGTTTCATATTCTTGAGACATATGAACTGAG i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1701997 2745 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I a score=57609.000000 s hg38.chr9_KI270719v1_random 22010 11 + 176845 gagaatgacta s panTro5.chr4 135046881 11 + 194502333 gagaattacta i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27391 11 - 70559 gagaatgacta i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441091 11 - 115148730 gagaattactg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131382801 11 + 190429646 GAGAATTACTA i rheMac8.chr5 C 0 I 354 s macFas5.chr5 130901489 11 + 189454096 GAGAATTACTA i macFas5.chr5 C 0 I 354 s macNem1.NW_012010911v1 34892812 11 - 40319822 GAGAATTACTA i macNem1.NW_012010911v1 C 0 I 354 s cerAty1.NW_012000798v1 4446948 11 - 9219162 GAGAATTACTA i cerAty1.NW_012000798v1 C 0 I 319 s chlSab2.chr7 78972764 11 + 135778131 gagaattactg i chlSab2.chr7 I 362 C 0 s manLeu1.NW_012103277v1 2738762 11 - 3013352 GAGAATTACTA i manLeu1.NW_012103277v1 C 0 I 361 s colAng1.NW_012114544v1 5969979 11 + 8656713 GAGAATTACTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399356 11 - 190850796 gagaattttta i calJac3.chr3 C 0 C 0 s aotNan1.NW_018507635v1 14890000 11 + 15034901 gagaattttta i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 921528 1 - 3201129 --G-------- i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1701997 2745 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e cebCap1.NW_016107420v1 4039717 0 - 6311556 C e saiBol1.JH378129 6483123 0 - 25294431 C a score=25636.000000 s hg38.chr9_KI270719v1_random 22021 6 + 176845 ----tttttc s panTro5.chr4 135046892 6 + 194502333 ----tttttc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27402 6 - 70559 ----tttttc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441102 6 - 115148730 ----tttttc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383166 6 + 190429646 ----tttttc i rheMac8.chr5 I 354 C 0 s macFas5.chr5 130901854 6 + 189454096 ----tttttc i macFas5.chr5 I 354 C 0 s macNem1.NW_012010911v1 34893177 6 - 40319822 ----tttttc i macNem1.NW_012010911v1 I 354 C 0 s cerAty1.NW_012000798v1 4447278 6 - 9219162 ----tttttc i cerAty1.NW_012000798v1 I 319 C 0 s chlSab2.chr7 78972775 6 + 135778131 ----tttttc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739134 6 - 3013352 ----tttttc i manLeu1.NW_012103277v1 I 361 C 0 s colAng1.NW_012114544v1 5969990 6 + 8656713 ----TTTttc i colAng1.NW_012114544v1 C 0 I 354 s calJac3.chr3 129399367 5 - 190850796 ----ttttt- i calJac3.chr3 C 0 C 0 s aotNan1.NW_018507635v1 14890011 5 + 15034901 ----ttttt- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 921529 6 - 3201129 TCAGTT---- i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1701997 2745 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e cebCap1.NW_016107420v1 4039717 0 - 6311556 C e saiBol1.JH378129 6483123 0 - 25294431 C a score=7098.000000 s hg38.chr9_KI270719v1_random 22027 1 + 176845 t s panTro5.chr4 135046898 1 + 194502333 t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27408 1 - 70559 t i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441108 1 - 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383172 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130901860 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893183 1 - 40319822 t i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447284 1 - 9219162 t i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78972781 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739140 1 - 3013352 t i manLeu1.NW_012103277v1 C 0 C 0 s calJac3.chr3 129399372 1 - 190850796 t i calJac3.chr3 C 0 C 0 s aotNan1.NW_018507635v1 14890016 1 + 15034901 t i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 921535 1 - 3201129 T i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1701997 2745 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e cebCap1.NW_016107420v1 4039717 0 - 6311556 C e saiBol1.JH378129 6483123 0 - 25294431 C e colAng1.NW_012114544v1 5969996 354 + 8656713 I a score=902042.000000 s hg38.chr9_KI270719v1_random 22028 94 + 176845 aatgtgatatataaaagcacatttatgtgacaatagcaataatagagaagat-----aaagttatgcagaagggagaagatttgacaatagcaagcatg s panTro5.chr4 135046899 96 + 194502333 aatgtgatatataaaagcacatttatgtgacaatagcaataatagagaagataaatgaaagttatacagaaggg---agatttgacaatagcaagcatg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27409 99 - 70559 aatgtgataaataaaagcacatttatgtgacaatagcaataatagagaagataaatgaaagttatgcagaagggagaagatttgacaatagcaagcatg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441109 99 - 115148730 aatgtgatatagaaaagcacatttatgtgacaatagcaataatagagaagataaatgaaagttatgcagaagggagaagatttgacaatagcaaccacg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383173 99 + 190429646 aatgtgatatataaaagcacatttatgtgacaatagcaataatagagaagataaattaaagttatgcagaagggagaagatttgacaatagcgaccatg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130901861 99 + 189454096 aatgtgatatataaaagcacatttatgtgacaatagcaataatagagaagataaattaaagttatgcagaagggagaagatttgacaatagcgaccatg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893184 99 - 40319822 aatgtgatatataaaagcacatttatgtgacaatagcaataatagagaagataaattaaagttatgcaaaagggagaagatttgacaatagcgaccatg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447285 99 - 9219162 actgtgatatataaaagcacatttatgtgacaatagcaataatagagaagataaattaaagttatgcggaagggagaagatttgacaatagcgaccatg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78972782 99 + 135778131 aatgtgatatataaaagcacatttatgtgacaatagcaataatagagaagataaatggaagttatgcagaagggagaagatttgacaatagcgaccatg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739141 99 - 3013352 aatgtgatatataaaagcacatttatgtgacaatagcaataatagagaagataaatgaaagttatgcagaagggagaagatttgacaatagcgaccatg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970350 99 + 8656713 aatgtgatatataaaagcacatttatgtgacaatagcaataatagagaagataaatgaaagttatgcagaagggagaagatttgacaatagcgaccatg i colAng1.NW_012114544v1 I 354 C 0 s calJac3.chr3 129399373 99 - 190850796 aatgtgatatataaaagcacatttatattacaatagcaatgatcgagaagataaatgaaagtgaggcagaaggaagaaaatttgacaatggcaaccgtg i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483123 94 - 25294431 -----GATATATAAAAGTACATTTATATGACAATAACAATGATAGAGAAGATAAATAAAAGTGAGGCAGAAGGGAGAAAATTCAACAATAGCAACCATG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039717 94 - 6311556 -----GATATATAAAAGCACATTTATATGACAATAGCAATTATATAGAAGATAAATGAAAGTGAGGCAGAAGGGAGAAAATTTGACAATAGCAACTATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890017 99 + 15034901 aatgtgatatataaaatcacatttatatgacagtagcaatgatagagaagataaatgaaagtgaggcagaagggagaaaacttgacaatagcaaccatg i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 921536 99 - 3201129 AATTTAACATATACAAACGTATTGATATGACAAAACTAATGATGGAGAAGAAAAATAGAAATGATGCAGAAGGGAAAAGAATTGTCAATAGCCACCATG i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1701997 2745 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I a score=1007023.000000 s hg38.chr9_KI270719v1_random 22122 109 + 176845 aaagtcctgcaggagaaaagtttggatgggatACTGAAT-AAAATTGTAATATTACTTTTTGATGCATACG-TTCACACCA-----------------TTTTTTCACAATGCTTCCTAGATTGCTCTG s panTro5.chr4 135046995 109 + 194502333 aaagtcccgcaggggaaaagtttggatgggatACTGAAT-AAAATTGTAATATTACTTTTTGATACATACG-TTCACACCA-----------------TTTTTTCACAATGCTTCCTAGATTGCTCTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27508 109 - 70559 aaagtcctgcaggagaaaagtttggatgggatACTGAAT-ACAATTGTAATATTACTTTTTGATGCATACG-TTCACACCA-----------------TTTTTTCACAATGCTTCCTAGATTGCTCTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441208 109 - 115148730 aaagtcctgcaggagaaaagtttggatgggatACTGAAT-AAAATTTTAATATTACTTTTTGATGCATACG-TTCACACCA-----------------TTTTTTCACAATGCTTCCTAGATTGCTTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383272 108 + 190429646 aaagtcctgcaggagaaaagtttggatgggatACTGAAT--AAATTGCAATATTACTTTTTGATGCATATG-TTCACACCA-----------------TTTTTTCACAATGCTTCTTAGATTGCTCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130901960 108 + 189454096 aaagtcctgcaggagaaaagtttggatgggatACTGAAT--AAATTGCAATATTACTTTTTGATGCATATG-TTCGCACCA-----------------TTTTTTCACAATGCTTCTTAGATTGCTCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893283 108 - 40319822 aaagtcctgcaggagaaaagtttggatgggatACTGAAT--AAATTGCAATATTACTTTTTGATGCATATG-TTCGCACCA-----------------TTTTTTCACAATGCTTCTTAGATTGCTCTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447384 108 - 9219162 aaagtcctgcaggagaaaagtttggatgggatACTGAAT--AAATTGCAATATTACTTTTTGATGCATATG-TTCGCACCA-----------------TTTTTTCACAATGTTTCTTAGATTGCTCTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78972881 109 + 135778131 aaagtcctgcgggagaaaagtttggatgggatACTGAAT-AAAATTGCAATATTACTTTTTGATGCATATG-TTCGCACCA-----------------TTTTTTCACAATGCTTCTTAGATTGCTCTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739240 108 - 3013352 aaagtcctgcaggagaaaagtttggatgggatACTGAAT--AAATTGCAATATTACTTTTTGATGCATATG-TTCGCACCA-----------------TTTTTTCACAATGCTTCTTAGATTGCTCTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970449 110 + 8656713 aaagtcctgcaggagaaaagtttggatgggatACTGAAT-AAAATTGCAATATTACTTTTTGATGCATATG-TTCACACCA----------------TTTTTTTCACAATGCTTCTTAGATTGCTCTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399472 111 - 190850796 gaagtcctgcaggagaaaagcttggatgggatACTGAATAAAAGTTGCAATATGACTTTTTGATGCATACT-TTCACACCA----------------TTTTTTTCACAATGCTTTCTACATTGATTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483217 111 - 25294431 AAAGTCCTGCAGGAGACAAGTTTGGATGGGATACTGAATAAAAGTTGCAATATGACTTTTTGATGCACACT-TTCACACCA----------------TTTTTTTCACAATGCTTTCTGGATTGATTTG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039811 108 - 6311556 AAAGTCCTGCAGAAG--AAGTTTGGATAGGATACTGAATAAAAGTTGCAATATGACTTTTTGATGCATAGT-TTCACACCA-----------------TTTTTTCACAATGCTTTCTAGATTGATTTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890116 111 + 15034901 aaagtcgtgcaggagaaaagtttggatgggatACTGAATAAAAGTTGCAATATGACTTTTTGATGCATACT-TTCACACCA----------------TTTTTTTCACAATCCTTTCTAGATTGATTTG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 921635 118 - 3201129 GAAGTCCTGTAGGAGAAAAGTTCGGATGAGATACTGTAACAAAATTACAGTATTAC-CTTTGATGGATAAA-TTTAATCCACAGTGCTTGGATTAAATTTAATCCACAATGC--------ACAGTCTC i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1704742 111 + 5974691 AAAGTTTTATACGATAAAACTTTGCATAAACTATTGAGTGAAAATTACAGAATTGTCTTTCAATGCATACATTTCATACTT-----------------TTTTCCCACAATGCTGTCTAGATTGCTTTG i dasNov3.JH569232 I 2745 I 367 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I a score=108588.000000 s hg38.chr9_KI270719v1_random 22231 11 + 176845 TATTTCTTTCC s panTro5.chr4 135047104 11 + 194502333 TATTTCTTTCC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27617 11 - 70559 TATTTCTTTCC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441317 11 - 115148730 TATTTCTTTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383380 11 + 190429646 TATTTCTTTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902068 11 + 189454096 TATTTCTTTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893391 11 - 40319822 TATTTCTTTCC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447492 11 - 9219162 TATTTCTTTCC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78972990 11 + 135778131 TATTTCTTTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739348 11 - 3013352 TATTTCTTTCC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970559 11 + 8656713 TATTTCTTTCC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399583 11 - 190850796 TACTTCTTTCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483328 11 - 25294431 TACTTCTTTTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039919 11 - 6311556 TACTTCTTTCC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890227 11 + 15034901 TACTTCTTTCC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 921753 11 - 3201129 CATTTCATTCT i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I a score=15058.000000 s hg38.chr9_KI270719v1_random 22242 2 + 176845 Ca s panTro5.chr4 135047115 2 + 194502333 Ca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27628 2 - 70559 Ca i gorGor5.CYUI01001450v1 C 0 C 0 s rheMac8.chr5 131383391 2 + 190429646 CA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902079 2 + 189454096 CA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893402 2 - 40319822 CA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447503 2 - 9219162 CA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973001 2 + 135778131 CG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739359 2 - 3013352 CA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970570 2 + 8656713 CA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399594 2 - 190850796 CA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483339 2 - 25294431 CA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039930 2 - 6311556 CA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890238 2 + 15034901 CA i aotNan1.NW_018507635v1 C 0 I 61 s otoGar3.GL873702 921764 2 - 3201129 TG i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e nomLeu3.chr7b 90441328 0 - 115148730 C a score=8281.000000 s hg38.chr9_KI270719v1_random 22244 1 + 176845 t s panTro5.chr4 135047117 1 + 194502333 t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27630 1 - 70559 t i gorGor5.CYUI01001450v1 C 0 C 0 s rheMac8.chr5 131383393 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902081 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893404 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447505 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973003 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739361 1 - 3013352 T i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970572 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399596 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483341 1 - 25294431 T i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039932 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 I 13 s otoGar3.GL873702 921766 1 - 3201129 T i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e nomLeu3.chr7b 90441328 0 - 115148730 C a score=25417.000000 s hg38.chr9_KI270719v1_random 22245 5 + 176845 ctata s panTro5.chr4 135047118 5 + 194502333 ctata i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27631 5 - 70559 ctata i gorGor5.CYUI01001450v1 C 0 C 0 s rheMac8.chr5 131383394 5 + 190429646 CAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902082 5 + 189454096 CAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893405 5 - 40319822 CAATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447506 5 - 9219162 CAATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973004 5 + 135778131 CAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739362 5 - 3013352 CAGTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970573 5 + 8656713 CAATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399597 5 - 190850796 TAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483342 5 - 25294431 TAATA i saiBol1.JH378129 C 0 C 0 s otoGar3.GL873702 921767 5 - 3201129 CAATA i otoGar3.GL873702 C 0 I 117 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e nomLeu3.chr7b 90441328 0 - 115148730 C a score=25750.000000 s hg38.chr9_KI270719v1_random 22250 5 + 176845 tatat s panTro5.chr4 135047123 5 + 194502333 tatat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27636 5 - 70559 tatat i gorGor5.CYUI01001450v1 C 0 C 0 s rheMac8.chr5 131383399 5 + 190429646 TATAT i rheMac8.chr5 C 0 I 2 s macFas5.chr5 130902087 5 + 189454096 TATAT i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34893410 5 - 40319822 TATAT i macNem1.NW_012010911v1 C 0 I 2 s cerAty1.NW_012000798v1 4447511 5 - 9219162 TATAT i cerAty1.NW_012000798v1 C 0 I 2 s chlSab2.chr7 78973009 5 + 135778131 TATAT i chlSab2.chr7 C 0 I 2 s manLeu1.NW_012103277v1 2739367 5 - 3013352 TATAT i manLeu1.NW_012103277v1 C 0 I 2 s colAng1.NW_012114544v1 5970578 5 + 8656713 TATAT i colAng1.NW_012114544v1 C 0 I 2 s calJac3.chr3 129399602 5 - 190850796 AATAT i calJac3.chr3 C 0 I 3 s saiBol1.JH378129 6483347 5 - 25294431 AATAT i saiBol1.JH378129 C 0 I 3 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e otoGar3.GL873702 921772 117 - 3201129 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e nomLeu3.chr7b 90441328 0 - 115148730 C a score=24.000000 s hg38.chr9_KI270719v1_random 22255 6 + 176845 atacgc s panTro5.chr4 135047128 6 + 194502333 acacac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27641 4 - 70559 atac-- i gorGor5.CYUI01001450v1 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e otoGar3.GL873702 921772 117 - 3201129 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e saiBol1.JH378129 6483352 3 - 25294431 I e calJac3.chr3 129399607 3 - 190850796 I e colAng1.NW_012114544v1 5970583 2 + 8656713 I e manLeu1.NW_012103277v1 2739372 2 - 3013352 I e chlSab2.chr7 78973014 2 + 135778131 I e cerAty1.NW_012000798v1 4447516 2 - 9219162 I e macNem1.NW_012010911v1 34893415 2 - 40319822 I e macFas5.chr5 130902092 1 + 189454096 I e rheMac8.chr5 131383404 2 + 190429646 I e nomLeu3.chr7b 90441328 0 - 115148730 C a score=5047.000000 s hg38.chr9_KI270719v1_random 22261 112 + 176845 atatatatatacacatatatatacacatatatatacacacacatatatatacacacatatata-cacacatatatatacacatatatacacacatatatacacacacatatat s gorGor5.CYUI01001450v1 27645 84 - 70559 -------------catatatatacacatatatatacacacacatatatataca-atatatataacacacatatatatacacatatatacacaaataaa--------------- i gorGor5.CYUI01001450v1 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e otoGar3.GL873702 921772 117 - 3201129 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e saiBol1.JH378129 6483352 3 - 25294431 I e calJac3.chr3 129399607 3 - 190850796 I e colAng1.NW_012114544v1 5970583 2 + 8656713 I e manLeu1.NW_012103277v1 2739372 2 - 3013352 I e chlSab2.chr7 78973014 2 + 135778131 I e cerAty1.NW_012000798v1 4447516 2 - 9219162 I e macNem1.NW_012010911v1 34893415 2 - 40319822 I e macFas5.chr5 130902092 1 + 189454096 I e rheMac8.chr5 131383404 2 + 190429646 I e nomLeu3.chr7b 90441328 0 - 115148730 C e panTro5.chr4 135047134 0 + 194502333 C a score=4841.000000 s hg38.chr9_KI270719v1_random 22373 36 + 176845 acacacacacatatatatacac----atatatatacacct s panTro5.chr4 135047134 40 + 194502333 acacacacacatatatatacatgtgtatatatatatatat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27729 24 - 70559 ------------atatatacac----atatatatacacat i gorGor5.CYUI01001450v1 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e otoGar3.GL873702 921772 117 - 3201129 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e saiBol1.JH378129 6483352 3 - 25294431 I e calJac3.chr3 129399607 3 - 190850796 I e colAng1.NW_012114544v1 5970583 2 + 8656713 I e manLeu1.NW_012103277v1 2739372 2 - 3013352 I e chlSab2.chr7 78973014 2 + 135778131 I e cerAty1.NW_012000798v1 4447516 2 - 9219162 I e macNem1.NW_012010911v1 34893415 2 - 40319822 I e macFas5.chr5 130902092 1 + 189454096 I e rheMac8.chr5 131383404 2 + 190429646 I e nomLeu3.chr7b 90441328 0 - 115148730 C a score=13358.000000 s hg38.chr9_KI270719v1_random 22409 34 + 176845 atatatacacacatatatatacacatacacacat s panTro5.chr4 135047174 34 + 194502333 atatatatacgcatatatatatagatatacacac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27753 34 - 70559 atatatacacacatatatatacacaaatatatat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441328 34 - 115148730 atatatatatatatatatatatatatatatatat i nomLeu3.chr7b C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44010031 7882 - 53741614 I e otoGar3.GL873702 921772 117 - 3201129 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e saiBol1.JH378129 6483352 3 - 25294431 I e calJac3.chr3 129399607 3 - 190850796 I e colAng1.NW_012114544v1 5970583 2 + 8656713 I e manLeu1.NW_012103277v1 2739372 2 - 3013352 I e chlSab2.chr7 78973014 2 + 135778131 I e cerAty1.NW_012000798v1 4447516 2 - 9219162 I e macNem1.NW_012010911v1 34893415 2 - 40319822 I e macFas5.chr5 130902092 1 + 189454096 I e rheMac8.chr5 131383404 2 + 190429646 I a score=2820.000000 s hg38.chr9_KI270719v1_random 22443 4 + 176845 atat s panTro5.chr4 135047208 4 + 194502333 atat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27787 4 - 70559 atat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441362 4 - 115148730 atat i nomLeu3.chr7b C 0 C 0 s canFam3.chr19 44017913 4 - 53741614 ATAG i canFam3.chr19 I 7882 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e otoGar3.GL873702 921772 117 - 3201129 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e saiBol1.JH378129 6483352 3 - 25294431 I e calJac3.chr3 129399607 3 - 190850796 I e colAng1.NW_012114544v1 5970583 2 + 8656713 I e manLeu1.NW_012103277v1 2739372 2 - 3013352 I e chlSab2.chr7 78973014 2 + 135778131 I e cerAty1.NW_012000798v1 4447516 2 - 9219162 I e macNem1.NW_012010911v1 34893415 2 - 40319822 I e macFas5.chr5 130902092 1 + 189454096 I e rheMac8.chr5 131383404 2 + 190429646 I a score=-2945.000000 s hg38.chr9_KI270719v1_random 22447 4 + 176845 --atac s panTro5.chr4 135047212 3 + 194502333 --ata- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27791 3 - 70559 --aca- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441366 4 - 115148730 --atat i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873702 921889 2 - 3201129 --AT-- i otoGar3.GL873702 I 117 I 1 s canFam3.chr19 44017917 4 - 53741614 ATAT-- i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e saiBol1.JH378129 6483352 3 - 25294431 I e calJac3.chr3 129399607 3 - 190850796 I e colAng1.NW_012114544v1 5970583 2 + 8656713 I e manLeu1.NW_012103277v1 2739372 2 - 3013352 I e chlSab2.chr7 78973014 2 + 135778131 I e cerAty1.NW_012000798v1 4447516 2 - 9219162 I e macNem1.NW_012010911v1 34893415 2 - 40319822 I e macFas5.chr5 130902092 1 + 189454096 I e rheMac8.chr5 131383404 2 + 190429646 I a score=-1904.000000 s hg38.chr9_KI270719v1_random 22451 2 + 176845 -ac s nomLeu3.chr7b 90441370 2 - 115148730 -aA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130902093 1 + 189454096 -A- i macFas5.chr5 I 1 C 0 s otoGar3.GL873702 921892 1 - 3201129 -A- i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44017921 2 - 53741614 TA- i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26298881 1034 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e saiBol1.JH378129 6483352 3 - 25294431 I e calJac3.chr3 129399607 3 - 190850796 I e colAng1.NW_012114544v1 5970583 2 + 8656713 I e manLeu1.NW_012103277v1 2739372 2 - 3013352 I e chlSab2.chr7 78973014 2 + 135778131 I e cerAty1.NW_012000798v1 4447516 2 - 9219162 I e macNem1.NW_012010911v1 34893415 2 - 40319822 I e rheMac8.chr5 131383404 2 + 190429646 I e gorGor5.CYUI01001450v1 27794 0 - 70559 C e panTro5.chr4 135047215 0 + 194502333 C a score=12225.000000 s hg38.chr9_KI270719v1_random 22453 2 + 176845 at s panTro5.chr4 135047215 1 + 194502333 -t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27794 1 - 70559 -t i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441372 2 - 115148730 AT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383406 2 + 190429646 AT i rheMac8.chr5 I 2 C 0 s macFas5.chr5 130902094 2 + 189454096 AT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893417 2 - 40319822 AT i macNem1.NW_012010911v1 I 2 C 0 s cerAty1.NW_012000798v1 4447518 2 - 9219162 AT i cerAty1.NW_012000798v1 I 2 C 0 s chlSab2.chr7 78973016 2 + 135778131 AT i chlSab2.chr7 I 2 C 0 s manLeu1.NW_012103277v1 2739374 2 - 3013352 AT i manLeu1.NW_012103277v1 I 2 C 0 s colAng1.NW_012114544v1 5970585 2 + 8656713 AT i colAng1.NW_012114544v1 I 2 C 0 s micMur3.chr14 26299915 2 - 93316391 AT i micMur3.chr14 I 1034 C 0 s otoGar3.GL873702 921893 2 - 3201129 AT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44017923 2 - 53741614 GT i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I e cebCap1.NW_016107420v1 4039933 13 - 6311556 I e saiBol1.JH378129 6483352 3 - 25294431 I e calJac3.chr3 129399607 3 - 190850796 I a score=389970.000000 s hg38.chr9_KI270719v1_random 22455 37 + 176845 TTTGACTGAAAATGATTGACTAGGATG---AAAGAAAATG s panTro5.chr4 135047216 37 + 194502333 TTTGACTGAAAATGATTGACTGGGATG---AAAGAAAATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27795 33 - 70559 TTTGACTGAAAATGATTG----GGATG---AAAGAAAATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441374 37 - 115148730 TTTGACCGAAAATGATTGACTGGGATG---AAAGAAAATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383408 37 + 190429646 TTTGACTGCAAATGATTGACTGGGATG---AAAGAAAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902096 37 + 189454096 TTTGACTGAAAATGATTGACTGGGATG---AAAGAAAATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893419 37 - 40319822 TTTGACTGAAAATGATTGACTGGGATG---AAAGAAAATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447520 37 - 9219162 TTTGACTGAAAATGATTGACTGGGATG---AAAGAAAATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973018 40 + 135778131 TTTGACTGAAAATGATTGACCGGTATGAAAAAAAAAAATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739376 37 - 3013352 TTTGACTGAAAATGATTGACTGGGATG---AAAGAAAATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970587 37 + 8656713 TTTGACTGAAAATGATTGACTGGGATG---AAAGAAAATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399610 37 - 190850796 TTTGACTGAAAATGATTGACTGAGACT---GAAGCAAATG i calJac3.chr3 I 3 C 0 s saiBol1.JH378129 6483355 37 - 25294431 TTTGACTGAAAATGATTGACTGGGATG---GAAGAAAATG i saiBol1.JH378129 I 3 C 0 s cebCap1.NW_016107420v1 4039946 37 - 6311556 TTTGACTGAAAATGATTGACTGGGATG---AAAGAAAATG i cebCap1.NW_016107420v1 I 13 C 0 s micMur3.chr14 26299917 37 - 93316391 TTTGAATGAAAACGATTGGCTGGGATG---AAAGAAAATG i micMur3.chr14 C 0 I 15 s otoGar3.GL873702 921895 37 - 3201129 TTTGACTGAAAATCAATAGCTGGGATG---AAATAAAATG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44017925 37 - 53741614 TTTGAGTGAAAATTATTGACTGAGATG---AGAGAAAATG i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I a score=73922.000000 s hg38.chr9_KI270719v1_random 22492 13 + 176845 AGAAAGAAAA-ACG s panTro5.chr4 135047253 13 + 194502333 AAAAAGAAAA-ACG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27828 13 - 70559 AGAAAGAAAA-ACG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441411 12 - 115148730 AAAAAG-AAA-ACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383445 14 + 190429646 AAAAAGAAAACACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902133 14 + 189454096 AAAAAGAAAAGACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893456 14 - 40319822 AAAAAGAAAACACA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447557 14 - 9219162 AAAAAGAAAACACA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973058 14 + 135778131 AAAAAAAAGACACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739413 14 - 3013352 AAAAAGAAAACACA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970624 14 + 8656713 AAAAAGAAAACACA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399647 14 - 190850796 AAATAGAAAAGACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483392 14 - 25294431 CAATAGAAAACACA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039983 14 - 6311556 AAAAAGAAAACACA i cebCap1.NW_016107420v1 C 0 C 0 s otoGar3.GL873702 921932 14 - 3201129 GAAAAGAAGGCAGA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44017962 12 - 53741614 AAAAACAAAA-AC- i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26299954 15 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e aotNan1.NW_018507635v1 14890240 61 + 15034901 I a score=19845.000000 s hg38.chr9_KI270719v1_random 22505 2 + 176845 GA s panTro5.chr4 135047266 2 + 194502333 GA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27841 2 - 70559 GA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441423 2 - 115148730 GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383459 2 + 190429646 GA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902147 2 + 189454096 GA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893470 2 - 40319822 GA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447571 2 - 9219162 GA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973072 2 + 135778131 GA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739427 2 - 3013352 GA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970638 2 + 8656713 GA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399661 2 - 190850796 GA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483406 2 - 25294431 GA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039997 2 - 6311556 GA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890301 2 + 15034901 GA i aotNan1.NW_018507635v1 I 61 C 0 s otoGar3.GL873702 921946 2 - 3201129 GC i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26299954 15 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44017974 0 - 53741614 C a score=544197.000000 s hg38.chr9_KI270719v1_random 22507 55 + 176845 ACAAGGAATTCTCAATTATATAAATAGAATATTATAATTAGTAAACCATGAATAA s panTro5.chr4 135047268 55 + 194502333 ACAAGGAATTCTCAATTATATAAATAGAATATTATAATTAGTAAACCATGAATAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27843 55 - 70559 ACAAGGAATTCTCAATTATATAAATAGAATATTATAATTAGTAAACCATGAATAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441425 55 - 115148730 ACAAGGAATTCTCAATTATATAAATAGAATATTATAATGAGTAAACCATGAATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383461 55 + 190429646 ACAAGGAATTCTCAATTATAGACATATAATATTATATTTAGGAAACCATGAATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902149 55 + 189454096 ACAAGGAATTCTCAATTATAGACATATAATATTATATTTAGGAAACCATGAATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893472 55 - 40319822 ACAAGGAATTCTCAATTATAGACATATAATATTATATTTAGGAAACCATGAATAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447573 55 - 9219162 ACAAGGAATTCTCAATTATATAAATATAATATTATATTTAGGAAACCATGAATAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973074 55 + 135778131 ACAAGGAATTCTCAATTATATAAATATAATATTATATTTAGGAAACCAAGAATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739429 55 - 3013352 ACAAGGAATTCTCAATTATATAAATATAATATTATATTTAGGAAACCATGAATAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970640 50 + 8656713 ACAAGGATTTCTCAATTATATA-----AATATTATATTTAGGAAACCATGAATAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399663 55 - 190850796 ACAAGGAATTCTCAATTACATAAATGGAATATTATAGTTAGTAAATCACAAATGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483408 55 - 25294431 ACAAGGAATTCTCaattatataaatgaaatattataattagaaaatcaaaaataa i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4039999 55 - 6311556 ACAAGCAATTCTCAATTATATAAATGGAATATTATAATTAGTAAATCACAAATAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890303 55 + 15034901 ACAAGGAATTCTCAATTATATAAATAGAATATTATAATCAGTAAATCACAAATAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26299969 55 - 93316391 ACAGGGAATTCTCAATTATATAAGTGGAATACTATAATCAGTCAACCATGAATGA i micMur3.chr14 I 15 C 0 s otoGar3.GL873702 921948 53 - 3201129 ACTGGGAATTCCC--TTACATAGGAAGGACATGACAATCAGTAAACCATGAATGA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44017974 51 - 53741614 ----AGAATTTTCCATGACATGAGTGGAATTCTCTAATCAGTACACATTGAATGA i canFam3.chr19 C 0 I 17 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=112440.000000 s hg38.chr9_KI270719v1_random 22562 13 + 176845 AAGAAGGCATATG s panTro5.chr4 135047323 13 + 194502333 AAGAAGGCATATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27898 13 - 70559 AAGAAGGCATATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441480 13 - 115148730 AAGAAGGCATATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383516 13 + 190429646 AAGAAGGCATGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902204 13 + 189454096 AAGAAGGCATGCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893527 13 - 40319822 AAGAAGGCATGTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447628 13 - 9219162 AAGAAGGCATGTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973129 13 + 135778131 AAGAAGGCATGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739484 13 - 3013352 AAGAAGGCATGTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5970690 13 + 8656713 AAGAAGGCATGTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399718 12 - 190850796 AAG-AGGCATATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483463 12 - 25294431 aaG-AGGCATATG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040054 12 - 6311556 AAG-AGGCATATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890358 12 + 15034901 AAG-AGGCATATG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26300024 13 - 93316391 AAGCAGGGATATG i micMur3.chr14 C 0 I 192 s otoGar3.GL873702 922001 13 - 3201129 GAGCAGGGATATT i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44018025 17 - 53741614 I a score=550500.000000 s hg38.chr9_KI270719v1_random 22575 130 + 176845 -ggctgggcgcggtggctcacgcttcta-atcccagcactttgg----gaggccgaggtgggc-ggttatgaagtcaggagattgagaccattctggctaacagggtgaaaccctgtctctactaaa--aataggaaaa s panTro5.chr4 135047336 130 + 194502333 -ggctgggcgcggtggctcacgcctcta-atccctgcactttgg----gaggccgaggtgggc-ggttatgaagtcaggagatcgagaccattctggctaacacggtgaaaccctgtctctactaaa--aatagaaaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 27911 129 - 70559 -ggctgggcgcggtggctcacgcctcta-atcccagcactttgg----gaggccgaggtgggc-ggttatgaagtcaggagatcgagaccattctggctaaca-ggtgaaaccccgtctctactaaa--aataggaaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441493 131 - 115148730 -ggccaggcgcggcggctcacgcctcta-atcccagcactttgg----gaggccgaggtgggcagattatgaagtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactaaa--aatacaagaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383529 131 + 190429646 -gaccgggtgcagtggctcacgcctgta-atcccagcaccttgg----gaggccaaggtaggaagattaacaagtcaggagattgagagcatcctggctaacacggtgaaatcctgtctctactaaa--aatacaaaaa i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130902217 131 + 189454096 -gaccgggtgcagtggctcacgcctgta-atcccagcaccttgg----gaggccaaggtaggaagattaacaagtcaggagattgagagcatcctggctaacacggtgaaatcctgtctctactaaa--aatacaaaaa i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34893540 131 - 40319822 -gaccgggtgcagtggctcatgcctgta-atcccagcaccttgg----gaggccaaggtaggaagattaacaaatcaggagattgagagcatcctggctaacatggtgaaatcctgtctctactaaa--aatacaaaaa i macNem1.NW_012010911v1 C 0 I 1 s cerAty1.NW_012000798v1 4447641 131 - 9219162 -gaccgggtgcagtggctcacgcctgta-atcccagcaccttgg----gaggccaaggtaggaagattaacaagtcaggagattgagagcatcctggctaacacggtgaaatcctgtctctactaaa--aatacaaaaa i cerAty1.NW_012000798v1 C 0 I 1 s chlSab2.chr7 78973142 131 + 135778131 -gaccgggtgcagtagctcacgcctgta-atcccagaaccttgg----gaggccaaggtaggaagattaccaagtcaggagatcgagagcatcctggctaacacggtgaaatcccgtctctactaaa--aatacaaaaa i chlSab2.chr7 C 0 I 44 s manLeu1.NW_012103277v1 2739497 131 - 3013352 -gaccgggtgcagtggctcacgcctgta-atcccaacaccttgg----gaggccaaggtaggaagattaacaagtcaggagattgagagcatcctggctaacacggtgaaatcctgtctctactaaa--aatacaaaaa i manLeu1.NW_012103277v1 C 0 I 1 s colAng1.NW_012114544v1 5970703 131 + 8656713 -gaccgggcgcagtggctcacgcctgta-atcccagcaccttgg----gaggccaaggtaggaagattaccaagtcaggagatggagagcatcctggctaacacgttgaaatcccgtctctactaaa--aatacaaaaa i colAng1.NW_012114544v1 C 0 I 44 s otoGar3.GL873702 922014 123 - 3201129 GTGCTTGATACAA------ACGCATCCATATCTCAGAAgggtggtgcctatggctcagtgggtagtgcactggccccatatactgaggg-----tggtg-----ggttcaaacccagcccggccaagctgcaacaaaaa i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300037 192 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44018025 17 - 53741614 I e aotNan1.NW_018507635v1 14890370 0 + 15034901 C e cebCap1.NW_016107420v1 4040066 0 - 6311556 C e saiBol1.JH378129 6483475 0 - 25294431 C e calJac3.chr3 129399730 0 - 190850796 C a score=56259.000000 s hg38.chr9_KI270719v1_random 22705 17 + 176845 attagtcaggcgtggtg s panTro5.chr4 135047466 17 + 194502333 attagtcaggcgtggtg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28040 17 - 70559 attagtcaggcgtggtg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441624 17 - 115148730 attagtcaggcatggtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383661 17 + 190429646 attagccgggtgtggtg i rheMac8.chr5 I 1 I 26 s macFas5.chr5 130902349 17 + 189454096 attagccgggtgtggtg i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34893672 17 - 40319822 attagccgggtgtggtg i macNem1.NW_012010911v1 I 1 I 26 s cerAty1.NW_012000798v1 4447773 17 - 9219162 attagccgggtgtggtg i cerAty1.NW_012000798v1 I 1 I 26 s manLeu1.NW_012103277v1 2739629 17 - 3013352 attagccgggtgtggtg i manLeu1.NW_012103277v1 I 1 I 26 s otoGar3.GL873702 922137 17 - 3201129 aatagctgggtgttttg i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300037 192 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44018025 17 - 53741614 I e aotNan1.NW_018507635v1 14890370 0 + 15034901 C e cebCap1.NW_016107420v1 4040066 0 - 6311556 C e saiBol1.JH378129 6483475 0 - 25294431 C e calJac3.chr3 129399730 0 - 190850796 C e colAng1.NW_012114544v1 5970834 44 + 8656713 I e chlSab2.chr7 78973273 44 + 135778131 I a score=17871.000000 s hg38.chr9_KI270719v1_random 22722 31 + 176845 atgggcacctgtagt-gccagctagtcgggcg s panTro5.chr4 135047483 31 + 194502333 atgggcacctgtagt-gccagctagtcgggag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28057 31 - 70559 atgggcacctgtagt-gccagctagtcgggag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441641 28 - 115148730 atgggtgcctgtagt-gccagctagtcg---g i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130902366 26 + 189454096 ---ggtgtctatagt-cccagctaaattag-- i macFas5.chr5 C 0 C 0 s otoGar3.GL873702 922154 30 - 3201129 gcagttgcctgtagtccccagctacttgag-- i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300037 192 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44018025 17 - 53741614 I e aotNan1.NW_018507635v1 14890370 0 + 15034901 C e cebCap1.NW_016107420v1 4040066 0 - 6311556 C e saiBol1.JH378129 6483475 0 - 25294431 C e calJac3.chr3 129399730 0 - 190850796 C e colAng1.NW_012114544v1 5970834 44 + 8656713 I e manLeu1.NW_012103277v1 2739646 26 - 3013352 I e chlSab2.chr7 78973273 44 + 135778131 I e cerAty1.NW_012000798v1 4447790 26 - 9219162 I e macNem1.NW_012010911v1 34893689 26 - 40319822 I e rheMac8.chr5 131383678 26 + 190429646 I a score=525686.000000 s hg38.chr9_KI270719v1_random 22753 109 + 176845 gaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcgagattccatctcagaa s panTro5.chr4 135047514 109 + 194502333 gaggctgaggcaggagaatcgcgtgaacccgggaggcagagcttgtagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagattccatctcagaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28088 108 - 70559 gaggctgaggcaggagaatggcgtgaaccc-ggaggcagagcttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagattccatctcagaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441669 109 - 115148730 gaggctgaggcaggagaatggcatgaacccgggaggcagagcttgcagtgagccgagatcacaccactgcactccagcctgggcgacagagcaagattccacctcagaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383704 109 + 190429646 gaggctgagacaggagaatggcctgaactcaggaggctgagtttgcagtgagccgagattgcctcactgtactccagcctgggcaataaagtgagattctgtctcaaaa i rheMac8.chr5 I 26 I 34 s macFas5.chr5 130902392 109 + 189454096 gaggctgagacaggagaatggcctgaactcaggaggctgagtttgcagtgagccgagattgcctcactgtactccagcctgggcaataaagtgagattctgtctcaaaa i macFas5.chr5 C 0 I 31 s macNem1.NW_012010911v1 34893715 109 - 40319822 gaagctgagacaggagaatggcctgaactcaggaggctgagtttgcagtgagccgagattgcctcactgtactccagcctgggcaataaagtgagattctgtctcaaaa i macNem1.NW_012010911v1 I 26 I 34 s cerAty1.NW_012000798v1 4447816 109 - 9219162 gaggctgagacaggagaatggcctgaactcaggaggctgagtttgcagtgagccgagattgcctcactgtacttcagcctgggcaataaagtgagattctgtctcaaaa i cerAty1.NW_012000798v1 I 26 I 34 s chlSab2.chr7 78973317 109 + 135778131 gaggctgagacaggagaatggcctgaactcaggaggcaaagtttgcagtgagccgagattgcatcactgcactcccacctgggtgatagagtgagattctatctcaaaa i chlSab2.chr7 I 44 I 29 s manLeu1.NW_012103277v1 2739672 109 - 3013352 gaggctgagacaggagaatggcctgaactcaggaggctgagtttgcagtgagccaagattgcctcactgtactccagcctgggcaataaagtgagattctgtctcaaaa i manLeu1.NW_012103277v1 I 26 I 37 s colAng1.NW_012114544v1 5970878 109 + 8656713 gaggctgagacaggagaatggcctgaactcaggaggcagagtttgcagtgagccaagattgcgtcactgcactccagcctgggcgatagagtgagattctgtctcaaaa i colAng1.NW_012114544v1 I 44 I 23 s otoGar3.GL873702 922184 104 - 3201129 --ggctgaggcaagagaattgcctaagcctgggagttggagattgctgtgaggtgtgat---gccatggcattctaccgagggcaataaagtgagactctgtctctgga i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300037 192 - 93316391 I e nasLar1.chr5 118945642 17469 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44018025 17 - 53741614 I e aotNan1.NW_018507635v1 14890370 0 + 15034901 C e cebCap1.NW_016107420v1 4040066 0 - 6311556 C e saiBol1.JH378129 6483475 0 - 25294431 C e calJac3.chr3 129399730 0 - 190850796 C a score=24579.000000 s hg38.chr9_KI270719v1_random 22862 4 + 176845 aaaa s panTro5.chr4 135047623 4 + 194502333 aaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28196 4 - 70559 aaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441778 4 - 115148730 aaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383847 4 + 190429646 aaaa i rheMac8.chr5 I 34 I 3 s macFas5.chr5 130902532 4 + 189454096 aaaa i macFas5.chr5 I 31 I 3 s macNem1.NW_012010911v1 34893858 4 - 40319822 aaaa i macNem1.NW_012010911v1 I 34 I 3 s cerAty1.NW_012000798v1 4447959 4 - 9219162 aaaa i cerAty1.NW_012000798v1 I 34 I 3 s chlSab2.chr7 78973455 4 + 135778131 aaaa i chlSab2.chr7 I 29 I 3 s manLeu1.NW_012103277v1 2739818 4 - 3013352 aaaa i manLeu1.NW_012103277v1 I 37 I 3 s nasLar1.chr5 118963111 4 + 174288623 agaa i nasLar1.chr5 I 17469 I 36150 s colAng1.NW_012114544v1 5971010 4 + 8656713 acaa i colAng1.NW_012114544v1 I 23 I 11 s otoGar3.GL873702 922288 4 - 3201129 aaaa i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300037 192 - 93316391 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44018025 17 - 53741614 I e aotNan1.NW_018507635v1 14890370 0 + 15034901 C e cebCap1.NW_016107420v1 4040066 0 - 6311556 C e saiBol1.JH378129 6483475 0 - 25294431 C e calJac3.chr3 129399730 0 - 190850796 C a score=17702.000000 s hg38.chr9_KI270719v1_random 22866 13 + 176845 g----aaaaaaaaaGGA s panTro5.chr4 135047627 16 + 194502333 g-gaaaaaaaaaaaGGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28200 17 - 70559 gaaaaaaaaaaaaaGGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441782 7 - 115148730 a----------aaaGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383854 13 + 190429646 ----aaaAGAAGAAGGC i rheMac8.chr5 I 3 C 0 s macFas5.chr5 130902539 10 + 189454096 ----aa---aAGAAGGC i macFas5.chr5 I 3 C 0 s macNem1.NW_012010911v1 34893865 13 - 40319822 ----aaaAGAAGAAGGC i macNem1.NW_012010911v1 I 3 C 0 s cerAty1.NW_012000798v1 4447966 13 - 9219162 ----aaAAGAAGAAGGC i cerAty1.NW_012000798v1 I 3 C 0 s chlSab2.chr7 78973462 13 + 135778131 ----aaaagaagaaGGC i chlSab2.chr7 I 3 C 0 s manLeu1.NW_012103277v1 2739825 13 - 3013352 ----aaaagaagaaGGC i manLeu1.NW_012103277v1 I 3 C 0 s colAng1.NW_012114544v1 5971025 13 + 8656713 ----aaaagaagaaGGC i colAng1.NW_012114544v1 I 11 C 0 s otoGar3.GL873702 922292 6 - 3201129 ---------aaaaaT-- i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300037 192 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44018025 17 - 53741614 I e aotNan1.NW_018507635v1 14890370 0 + 15034901 C e cebCap1.NW_016107420v1 4040066 0 - 6311556 C e saiBol1.JH378129 6483475 0 - 25294431 C e calJac3.chr3 129399730 0 - 190850796 C a score=76482.000000 s hg38.chr9_KI270719v1_random 22879 10 + 176845 ATACTTGAT---------A s panTro5.chr4 135047643 10 + 194502333 ATACTTGAT---------A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28217 10 - 70559 ATACTTGAT---------A i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441789 10 - 115148730 ATACTTCAT---------A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383867 10 + 190429646 ATACTTGAT---------A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902549 10 + 189454096 ATACTTGAT---------A i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893878 10 - 40319822 ATACTTGAT---------A i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447979 10 - 9219162 ATACTTGAT---------A i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973475 10 + 135778131 ATACTTGAT---------A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739838 10 - 3013352 ATACTTTAT---------A i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971038 19 + 8656713 ATACTTGATTAAAAAAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399730 10 - 190850796 ATACTTGAT---------A i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483475 10 - 25294431 ATACTTGAG---------C i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040066 10 - 6311556 ATACTTGAT---------A i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890370 10 + 15034901 ATACTTGAT---------A i aotNan1.NW_018507635v1 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300037 192 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44018025 17 - 53741614 I e otoGar3.GL873702 922298 0 - 3201129 C a score=1528830.000000 s hg38.chr9_KI270719v1_random 22889 181 + 176845 -AAAAA--GGTATCCATATATCAGATAAGAAGATGTAAAATTTATGTGCTATCTACTTCTGGAATTTCCACCATAAGGGAATA----------ATAATGACGTAGGGGTTCAC---------------------------------TTAAAGG-------------------------------------------------ACAGAA----------------------------------------------------------------------C--TTGTACTTGGTTACTTATGTAC-ACAATCTCTGCCTTACTTG--CTTTT-GGTGGATCGTATTGTGTCATT s panTro5.chr4 135047653 183 + 194502333 -AAAAAAAGGTATCCATATATCAGATAAGAAGATGTAAAATTTATGTGCTATCTACTTCTGGAATTTCCACCATAAGGGAATA----------ATAATGATGTAGGGGTTCAC---------------------------------TTAAAGG-------------------------------------------------ACAGAA----------------------------------------------------------------------C--TTGTACTTGGTTACTTATGTAC-ACAATCTCTGCCTTACTTG--CTTTT-GGTGGATCGTATTGTGTCATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28227 181 - 70559 -AAAAA--GGTATCCATATATCAGATAAGAAGATGTAAAATTTATGTGCTATCTACTTCTGGAATTTCCACCATAAGGGAATA----------ATAATGATGTAGGGGTTCAC---------------------------------TTAAAGG-------------------------------------------------ACAGAA----------------------------------------------------------------------C--TTGTACTTGGTTACTTATGTAC-ACAATCTCTGCCTTACTCG--CTTTT-GGTGGATCGTATTGTGTCATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441799 180 - 115148730 -AAAA---GATATCCATAGATCAGATAAGAAGCTGTAAAATTTATGTGCTATCTACTTCTGGAATATCCACCATAAGGGAATA----------ATAATGACATAGGAGTTCAC---------------------------------TTAAAGG-------------------------------------------------ACAGAA----------------------------------------------------------------------C--TTGTACTTAGTTACTTATGTAC-ACAATCTCTGCCTTACTTG--CTTTT-GGTGGTTCATATTGTATCATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131383877 180 + 190429646 -AAAA---GGTATCCATATATCAGATAAGAAGCTGTAAAATTTATGTGCTGTCTACTTCTGGAATTTCCACCATACAGGAATA----------ATCATGTTGTAGGAGTTCAC---------------------------------TTAAAGG-------------------------------------------------ATAGAA----------------------------------------------------------------------C--TTGTACTTGGTTATTTATGTAC-ACAATCTCTGCCTTACTTG--CTTTT-GGTGGATCGTATTGTGTAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902559 180 + 189454096 -AAAA---GGTATCCATATATCAGATAAGAAGCTGTAAAATTTATGTGCTGTCTACTTCTGGAATTTCCACCATACAGGAGTA----------ATCATGTTGTAGGAGTTCAC---------------------------------TTAAAGG-------------------------------------------------ATATAA----------------------------------------------------------------------C--TTGTACTTGGTTATTTATGTAC-ACAATCTCTGCCTTACTTG--CTTTT-GGTGGATCATATTGTGTAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34893888 180 - 40319822 -AAAA---GGTATCCATATATCAGATAAGAAGCTGTAAAATTTATGTGCTGTCTACTTCTGGAATTTCCACCATACAGGAATA----------ATCATGTTGTAGGAGTTCAC---------------------------------TTAAAGG-------------------------------------------------ATAGAA----------------------------------------------------------------------C--TTGTACTTGGTTATTTATGTAC-ACAATCTCTGCCTTACTTG--CTTTT-GGTGGATCGTATTGTGTAGTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4447989 180 - 9219162 -AAAA---GGTATCCATATATCAGATAAGAAGCTGTAAAATTTATGTGCTGTCTACTTCTGGAATTTCCACCACACAGAAATA----------ATCATGTTGTAGGAGTTCAC---------------------------------TTAAAGG-------------------------------------------------ATAGAA----------------------------------------------------------------------C--TTGTACTTGGTTATTTATGTAC-ACAATCTCTGCCTAACTTG--CTTTT-GTTGGATCGTATTGTGTAGTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973485 180 + 135778131 -AAAA---GGTATCCATATATCAGATAAGAAGCTGTAAAATTTATGTGCTCTCTACTTCTGGAACTTCCACCATACAGGAATA----------AGAATGTTGTAGGGGTTCAC---------------------------------TTAAAGG-------------------------------------------------ATAGAA----------------------------------------------------------------------C--TTGTACTTGGTTATTTATATAC-ACAATCTCTGCCTTACTCG--CTGTT-GGTGGATCGTATTGTGTAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2739848 180 - 3013352 -AAAA---GGTATCCATATATCAGATAAGAAGCTGTAAAATTTATGTGCTGTCTACTTCTGGAATTTCCACCATACAGGAATA----------ATCATGTTGTAGGAGTTCAC---------------------------------TTAAAGG-------------------------------------------------ATAGAA----------------------------------------------------------------------C--TTGTACTTGGTTATTTATGTAC-GCAATCTCTGCCTAACTTG--CTTTT-GGTGGATCGTATTGTGTAGTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971057 179 + 8656713 -AAAA---GGTATCCATATAACAGATAAGAAGCTGTAAAA-TTATGTGCTGTCTACTTCTGGAATTTCCACCATACAGGAATA----------ATAATGTTGTAGGGGTTCAC---------------------------------TTAAAGG-------------------------------------------------ATAGAA----------------------------------------------------------------------C--TTGCACTTGGTTATTTATGTAC-ACAATCTCTGCCTTATTTG--CTTTT-GGTGGATCGTACTGTGTAGTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399740 181 - 190850796 -AAAA---GGTCTCCATATATCCGATAAGAAGCTATAAAATTTATGTACTATCTATTTCTAGAATTTCCACCACAAAGGAAAA----------ATAATGACATAGGGGCTCAC---------------------------------TTAAAGG-------------------------------------------------ACACAA----------------------------------------------------------------------C--TTGTACTTGGTTACATATGTAT-ACAATCTCTGCTTTAATTG--CTTTTGGGTGGATTGTATTGTGTAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483485 180 - 25294431 -AAAA---GGTCT-CATATATCAGATAAGAAGCTGTAAAATTTATGTACTATCTATTTCTAGAATTTCCACCACAAAGGAATA----------ATAATGACACAGGGGCTCAC---------------------------------CTAAAGG-------------------------------------------------ACACAA----------------------------------------------------------------------C--TTGTACTTGGTTACATATGTAT-AGAATCTCTGCTTTATTTG--TTTTTGGGTGGATTGTACTGTGTAGTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040076 178 - 6311556 -AAAA---GGTCTCCATATATCAGATAAGAAGCTGTAAAATTTATGTACTATCTACTTCTAGAATTTCCACCACAAAGGAATA----------ATAATGACATAGGGGCTCAC---------------------------------TTAAAGG-------------------------------------------------ACACAA----------------------------------------------------------------------C--TTGTGCTTGGTTATATATGTAT-ACAA--TCTGCTTTATTTG--CTTTT-GGTGGATTGTATTGTGTAGTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890380 180 + 15034901 -AAAA---GGTCTCCACATATCAGATAAGAAGCTGTAAAATTTATGTACTATCTACTTCTAGAATTTCCACCACAAAGGAATA----------ATAATGACATAGGGGCTTAC---------------------------------TTAAAGG-------------------------------------------------ACACAA----------------------------------------------------------------------C--TTGTACTTGGTTACATATGT-T-ACAATCTCTGCTTTATTTG--CTTTTGGGTGGATCGTATTGCGTAGCT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 922298 304 - 3201129 -------------------------------GTTGTAAAA-TTATTCATTATCTACTCCCCAAATTTGTAAACTAAACGAATA----------GAAGTGACATAGGGACTCACATGGAAACAGTTGCATTCCATTGTTATGGTGGGTTCAAGGAATCACCCCAGTGAAAGAGAGAGGGTTGCACATATGTATGAGTGGGACAACAGAACATGTGAAAGCAGCCAGTCAGGGGTCAGTCTCTGACTTTCCCATTGGAATGCAACTCTAAGGAAATATCCC--TTATGCTCCATTATTTATATAC-TCAAACTCTTCCTTGCCTG--TTTTT-GGTTGGCCATAGTGTGCAGTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018042 196 - 53741614 AAAAA---GACACCTCCATATCAGGCATGAAGCTGTAAAATTTATGTATTATCTACTTCCCAATCTCCTATACTAAAGGAATGTCAGATCAATAAAATGATGTAAGGGTTCAC---------------------------------ATTAAGG-------------------------------------------------AAATAA----------------------------------------------------------------------CTTTTATATTTTATTACATTTGTACTTTAATCTCTTCCTTACTTAATTTTTT-GGTGGGTCATAATACATAGTT i canFam3.chr19 I 17 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300037 192 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=767200.000000 s hg38.chr9_KI270719v1_random 23070 79 + 176845 TCAATGTGGCCATTATTGTCTTTTATGAACATATACAATAAAGTAATATACCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTGT s panTro5.chr4 135047836 79 + 194502333 TCAATGTGGCCATTATTGTCTTTTATGAACATATACAACAAAGTAATATACCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTATATCTCTACTGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28408 79 - 70559 TCAATGTGGCCATTATTGTCTTTTATGAACATATACAACAAAGTAATATACCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90441979 78 - 115148730 TCAATGTGACCTTTATTGT-TTTTATGAACATATACAATAAAGTAATATACCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384057 79 + 190429646 TCAATGTGGCCATTATTGTGTTTTATGAACACATGCAACAAAGTAATATATCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130902739 79 + 189454096 TCAATGTGGCCATTATTGTGTTTTATGAACACATGCAACAAAGTAATATATCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTTT i macFas5.chr5 C 0 I 311 s macNem1.NW_012010911v1 34894068 79 - 40319822 TCAATGTGGCCATTATTGTGTTTTATGAACACATGCAACAAAGTAATATATCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448169 79 - 9219162 TCAATGTGGCCATTATTGTGTTTTATAAACACATGCAACAAAGTAATATATCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973665 79 + 135778131 TCAATGTGGCCATTATTGTGTTTTATGAACATATACAACAAAATAATATATCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740028 79 - 3013352 TCAATGTGGCCATTATTGTGTTTTATGAACACATGCAACAAAGTAATATATCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971236 79 + 8656713 TCAGTGTGGCCATTATTGTGTTTTATGAACATATAAAACAAAGTAATATGTCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTACATCTCTACTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129399921 79 - 190850796 TCAATGTGGTCACTATTATCTTTTATGAACATATACAACAAAGTAATATACCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTATAGCTCTACTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483665 79 - 25294431 TCAATGTGGTCACTATTATCTTTTATGAACATATACAACAAAGTAATATACCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTCTATAGCTCTACTGT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040254 77 - 6311556 TCAATGTGGTCACTATTATCTTTTATGAACATAGACAACAAAGTAATATACCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------CATAATGTC--TAGCTCTACTGT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890560 79 + 15034901 TCAGTGTGGTCACTCTTGTCTTTTATGAACATATACAACAAAGTAATATACCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------TATAATGTCCATAGCTCTACTGT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26300229 79 - 93316391 TCAATGTGGCCACTATTATCTTTTATGAACATATACAACGAACTAATATACTTTTC----------------------------------------------------------------------------------------------------------------------------------------------------CATAGTATGTAAATCTCTACTGT i micMur3.chr14 I 192 C 0 s otoGar3.GL873702 922602 227 - 3201129 TCAGTGTGGCCACTGTTATCTTTTATGAACATACACAACAAACACATATACTTTTCTTTTTGTTGTTGtttttaattatgattttataaaaaattataattttattGTTTGGGAATCATTGAGGGTACAAAGAATTAGTTTACACTGATTGTATTTGTCACATAAAGTCTCTCTTATAATTGTGTCCTGCCTGTGAGAGGTTTTCATAGTATCGCAATCACTACTGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018238 73 - 53741614 TTAATGTGATCACTGTTATCTTTCATTGACATATACAAAACAATCA------TTTC----------------------------------------------------------------------------------------------------------------------------------------------------TATAGTGTCTACTTCTTTCTTGT i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=103378.000000 s hg38.chr9_KI270719v1_random 23149 9 + 176845 AATTTAAAC s panTro5.chr4 135047915 9 + 194502333 AATTTAAAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28487 9 - 70559 AATTTAAAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442057 9 - 115148730 AATTTAAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384136 9 + 190429646 AATTTAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903129 9 + 189454096 aaTTTAAAC i macFas5.chr5 I 311 C 0 s macNem1.NW_012010911v1 34894147 9 - 40319822 AATTTAAAC i macNem1.NW_012010911v1 C 0 I 311 s cerAty1.NW_012000798v1 4448248 9 - 9219162 AATTTAAAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973744 9 + 135778131 AATTTAAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740107 9 - 3013352 AATTTAAAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971315 9 + 8656713 AATTTAAAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400000 9 - 190850796 AATTTAAGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483744 9 - 25294431 AATTTAAAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040331 9 - 6311556 AATTTAAAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890639 9 + 15034901 AATTTAAAC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26300308 9 - 93316391 AACATAAAC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 922829 9 - 3201129 AACCTAAAA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018311 9 - 53741614 AATCTAAAA i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=37088.000000 s hg38.chr9_KI270719v1_random 23158 6 + 176845 TTTAAT s panTro5.chr4 135047924 6 + 194502333 TTTAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28496 6 - 70559 TTTAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442066 6 - 115148730 CTTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384145 6 + 190429646 CATAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903138 6 + 189454096 CATAAA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4448257 6 - 9219162 CGTAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973753 6 + 135778131 CTTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740116 6 - 3013352 CATAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971324 6 + 8656713 TTTAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400009 6 - 190850796 CTTAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483753 6 - 25294431 CTTAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040340 6 - 6311556 CTTAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890648 6 + 15034901 TTTAAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26300317 6 - 93316391 CTAAAT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 922838 6 - 3201129 CTTAAA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018320 6 - 53741614 TGTAAT i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e macNem1.NW_012010911v1 34894156 311 - 40319822 I a score=188640.000000 s hg38.chr9_KI270719v1_random 23164 17 + 176845 -GGCTCAAAAATGCTAAA s panTro5.chr4 135047930 17 + 194502333 -GGCTCAAAAATGCTAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28502 17 - 70559 -GGCTCAAAAATGCTAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442072 17 - 115148730 -GGCTCAAAAATGCTGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384151 17 + 190429646 -TGCTCAAAAATGCTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903144 17 + 189454096 -GGCTCAAAAATGCTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894467 17 - 40319822 -GGCTCAAAAATGCTAAA i macNem1.NW_012010911v1 I 311 C 0 s cerAty1.NW_012000798v1 4448263 17 - 9219162 -GGCTCAAAAATGCTAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973759 17 + 135778131 -GGCTCAAAAATGCTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740122 17 - 3013352 -GGCTCAAAAATGCTAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971330 17 + 8656713 -GGCTCAAAAATGCTAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400015 17 - 190850796 -GGCTCAAAAATGCTAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483759 17 - 25294431 -GGCTCAAAAATGCTAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040346 7 - 6311556 -GGCTCAA---------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890654 17 + 15034901 -GGTTGAAAAATGCTAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26300323 17 - 93316391 -GGCTCAAAAATGCTAAA i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 922844 17 - 3201129 -GGCTCAAAAGTGCTAAA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018326 18 - 53741614 ATAGCAAAAAATGCTAAA i canFam3.chr19 C 0 I 133 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=97105.000000 s hg38.chr9_KI270719v1_random 23181 9 + 176845 TTACAAAAT s panTro5.chr4 135047947 9 + 194502333 TTACAAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28519 9 - 70559 TTACAAAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442089 9 - 115148730 TTACAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384168 9 + 190429646 TTACAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903161 9 + 189454096 TTACAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894484 9 - 40319822 TTACAAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448280 9 - 9219162 TTACAAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973776 9 + 135778131 TTACAAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740139 9 - 3013352 TTACAAAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971347 9 + 8656713 TTACAAAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400032 9 - 190850796 TTACAAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483776 9 - 25294431 TTACAAAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040353 5 - 6311556 ----AAAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890671 9 + 15034901 TTACAAAAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26300340 9 - 93316391 TTATGAAAT i micMur3.chr14 C 0 I 44 s otoGar3.GL873702 922861 9 - 3201129 TTTTAAAAG i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 44018477 9 - 53741614 ctccaaaaa i canFam3.chr19 I 133 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=244149.000000 s hg38.chr9_KI270719v1_random 23190 33 + 176845 ---------------AGAGAAAGATGTGTGTTAAATGCAGATTAATAT s panTro5.chr4 135047956 33 + 194502333 ---------------AGAGAAAGATGTGTGTTAAATGCAGATtaatat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28528 33 - 70559 ---------------AGAGAAAGATGTGTGTTAAATGCAGATtaatat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442098 33 - 115148730 ---------------AGAGAAAGATGTGTGTTAAATGCAGATtaatat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384177 31 + 190429646 ---------------AGAGAA--ATGTGTGTCAAACACAGATtaatat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903170 31 + 189454096 ---------------AGAGAA--ATGTGTGTCAAACACAGATTAATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894493 31 - 40319822 ---------------AGAGAA--ATGTGTGTCAAACACAGATtaatat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448289 31 - 9219162 ---------------AGGGAA--ACGTGTGTTAAACACAGATtaatat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973785 31 + 135778131 ---------------AGAGAA--ACGTGTGTTAAACACAGATtaatat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740148 31 - 3013352 ---------------AGAGAA--ACGTGTGTTAAACACAGATtaatat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971356 29 + 8656713 ---------------AGAGAA--AC--ATGTTAGATGCAGATTAATAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400041 33 - 190850796 ---------------AGACAAAGATTTTTGTTAAATACAGATTAACGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483785 33 - 25294431 ---------------AGAGAAAGATTTTTGTTAAATACAGATTAATAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040358 33 - 6311556 ---------------AGAGAAAGATTTTTGTTAAATACAGATTAATAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890680 33 + 15034901 ---------------AGAGAAATATTTTTGTTAAATACAGATTAATAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 922873 33 - 3201129 ---------------AGAGGAAAATATATGCCAAATAGAGATTAGTGT i otoGar3.GL873702 I 3 I 294 s canFam3.chr19 44018486 48 - 53741614 aaaAAAAAAAGCAGAAAGGGAAAACCTGCGCTACATACATTTTCATGT i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300349 44 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=15576.000000 s hg38.chr9_KI270719v1_random 23223 4 + 176845 AATT s panTro5.chr4 135047989 4 + 194502333 aatt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28561 4 - 70559 aatt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442131 4 - 115148730 aatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384208 4 + 190429646 aatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903201 4 + 189454096 AATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894524 4 - 40319822 aatt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448320 4 - 9219162 aatt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973816 4 + 135778131 aatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740179 4 - 3013352 aatt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971385 4 + 8656713 AATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400074 3 - 190850796 AAC- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483818 3 - 25294431 AAC- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040391 3 - 6311556 AAC- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890713 3 + 15034901 AAC- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 923200 4 - 3201129 AATT i otoGar3.GL873702 I 294 C 0 s canFam3.chr19 44018534 4 - 53741614 AATT i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300349 44 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1704853 367 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=17824.000000 s hg38.chr9_KI270719v1_random 23227 3 + 176845 TAA s panTro5.chr4 135047993 3 + 194502333 taa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28565 3 - 70559 taa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442135 3 - 115148730 taa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384212 3 + 190429646 taa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903205 3 + 189454096 TTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894528 3 - 40319822 taa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448324 3 - 9219162 taa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973820 3 + 135778131 taa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740183 3 - 3013352 taa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971389 3 + 8656713 TAA i colAng1.NW_012114544v1 C 0 C 0 s otoGar3.GL873702 923204 3 - 3201129 TAG i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44018538 3 - 53741614 TAT i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1705220 3 + 5974691 TAA i dasNov3.JH569232 I 367 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300349 44 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e aotNan1.NW_018507635v1 14890716 0 + 15034901 C e cebCap1.NW_016107420v1 4040394 0 - 6311556 C e saiBol1.JH378129 6483821 0 - 25294431 C e calJac3.chr3 129400077 0 - 190850796 C a score=1288656.000000 s hg38.chr9_KI270719v1_random 23230 120 + 176845 ATAATATTATATATGAT--------AAGGGTTTGTAAAACTTAACTATTAAGAT--GGATAGATGAGAAAGATAGAAACCTAGAATACAATACTAG-AAAATCTAGAAACATAGTAGAGATGAGTTCAATA s panTro5.chr4 135047996 120 + 194502333 ataatattatatataat--------aaGGGTTTGTAAAACTTAACCATTAAGAT--GGATAGATGAGAAAGATAGAAACCTAGAATACAATACTAG-AAAATCTAGAAACATAGTAGAGATGAGTTCAATA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28568 120 - 70559 ataatattatatatgat--------aaGGGTTTGTAAAACTTAACCATTAAGAT--GGATAGATGAGAAAGATAGAAACCTAGAATACAATACTAG-AAAATCTAGAAACATAGTAGAGATGAGTTCAATA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442138 120 - 115148730 ataatattatatatgat--------aaGGGTTTGTAAAACTTAACCATTAAGAC--GGATAGATGGGAAAGATAGAAACCTAGAATACAATACTAG-AAAATCTAGAAACATAGTAGAGATGAGTTCAATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384215 120 + 190429646 ataatattatatatgat--------aaaatTTTGTAAAACTTAACCATGAAGAT--GGATAGATGAGAAAGATAGAAACCTAGAATACTATACTAG-AAAATCTGGAAACATAGTAGAGACGAGTTCAATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903208 120 + 189454096 ATAATATTATATATGAT--------AAAATTTTGTAAAACTTAACCATGAAGAT--GGATAGATGAGAAAGATAGAAACCTAGAATACTATACTAG-AAAATCTGGAAACATAGTAGAGACGAGTTCAATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894531 120 - 40319822 ataatattatatatgat--------aaaatTTTGTAAAACTTAACCATGAAGAT--GGATAGATGAGAAAGATAGAAACCTAGAATACTATACTAG-AAAATCTGGAAACATAGTAGAGACGAGTTCAATC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448327 120 - 9219162 ataatattatatatgat--------aaaatTTTGTAAAACTTAACCATGACGAT--GGATAGATGAGAAAGATAGAAACCTAGAATACTACACTAG-AAAATCTGGAAACATAGTAGAGACGAGTTCAATC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973823 120 + 135778131 ataatattatatataat--------aaaatGTTGTAAAACTTAAACATTAAGAT--GGATAGATGAGAAAAATAGAAACCAAGAATACTATACTAG-AAAATCTAGAAACATGGTAGAGACGAGTTCAATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740186 120 - 3013352 ataatattatatatgat--------aaaatTTTGTAAAACTTAACCATGAAGAT--GGATAGATGAGAAAGATAGAAACCTAGAATACTATACTAG-AAAATCTGGAAACATAGTAGAGACGAGTTCAATC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971392 120 + 8656713 ATAATATTATATATGAT--------AAAACTTTGTAAAACTTAACCATTAAGAT--GGATAGATAAGAAAGATAGAAACCTAGAATACTATACTAG-AAAATCTAGAAACATAGTAGAGACGAGTTCAATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400077 120 - 190850796 ATTATATTATATATGAT--------AAGGGTATGTAAAACTTAACCATTAAGGT--GGATGGAAGAGAAAGATAGAAACCTAGAATATAGTACTAG-AAAATCCAGAAACATCGTAGAGATGAGTTCAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483821 108 - 25294431 ------------GTGTA--------AAGGGTATGTACAACTTAACCGTTAAGAT--GGATGGATGAGAAAGATAGGAACCTAGAATATAGTACTGG-AAAATCTAGGAACATCATAGAGATGAGTTCAGTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040394 120 - 6311556 ATTATATTATATATGAT--------AAGGGTATGTAAAACTTAACCATTAAGGT--GGAGGGATGAGAAAGATAGGAGCCTAGAATATAGTACTGG-ATAATCTAGAAACATCGTAGAGATGAGTTCAATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890716 120 + 15034901 ATTATATTATATATGAT--------AAGGGTATGTAAAACTTAACCATTAAGGT--GGATGGATGAGAAAGATAGGAACCTAGAATATAGTCCTGG-AAAATCTAGAAATATCATAGAGATGAGTTCAATA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26300393 121 - 93316391 ATAATATTGTATATGAA--------AGGGGTATTTAAAACTTAATTGTCAAGGC--GGAGAGATGAGAAGGACAGAAACTTAGATTACAGTACTAGAAAAATCAAGAAATGCAGTAGAGATGGGTTCAGTA i micMur3.chr14 I 44 C 0 s otoGar3.GL873702 923208 119 - 3201129 ATAACATTTTATAC-AA--------GAGGGTATTTACCACTTAATTGTCAAGGT--GGAGGGATGAGAAGGACAGGAATCTAGGCTTCAGTATCAG-AAAATCAAGATATACATTAGAGATCAGCTCAGTA i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44018542 121 - 53741614 ATAATATTGTGTATGAC--------AAGGGTATTTAAAACTTAAGCATCAAGGCTAAGAGGGTTGAAAAGATTATAGTACTAGATTATAGTACTAG-AAAATTTA-AAATACAGTAAAGATGAGCTTTATA i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1705223 127 + 5974691 ATTATGTTGTATATATTAAATCATAAAAGCTATTTAAAATTTAATTGTTAGAAT--TGAAGAATGAGAAGGGCAGGAA-CTCCATTACAGCTCAAG-AAAATCTAGGAATATAATAAAGATGAGTTCAATA i dasNov3.JH569232 C 0 I 243 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=89449.000000 s hg38.chr9_KI270719v1_random 23350 9 + 176845 ATTCAATTC s panTro5.chr4 135048116 9 + 194502333 ATTCGATTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28688 9 - 70559 ATTCCATTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442258 9 - 115148730 ATTCGATTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384335 9 + 190429646 ATTTGATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903328 9 + 189454096 ATTTGATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894651 9 - 40319822 ATTTGATTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448447 9 - 9219162 ATTTGATTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973943 9 + 135778131 ATTTGATTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740306 9 - 3013352 ATTTGATTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971512 9 + 8656713 ATTTGACTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400197 9 - 190850796 ATTTGGTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483929 9 - 25294431 ATTTAATTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040514 9 - 6311556 ATTTGATTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890836 9 + 15034901 ATCTGATTC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26300514 9 - 93316391 AGTTGATCC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 923327 9 - 3201129 AATTGATCC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018663 9 - 53741614 GTTTGAACC i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1705350 243 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=302872.000000 s hg38.chr9_KI270719v1_random 23359 24 + 176845 TATATAagaggtcatcaaactaca s panTro5.chr4 135048125 24 + 194502333 TATATAagaggtcatcaaactaca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28697 24 - 70559 TATATAagaggtcatcaaactaca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442267 24 - 115148730 TATATAagaggtcatcaaactaca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384344 24 + 190429646 TGTATAagaggtcatcaaactaca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903337 24 + 189454096 TGTATAagaggtcatcaaactaca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894660 24 - 40319822 TGTATAagaggtcatcaaactaca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448456 24 - 9219162 TGTATAagaggtcatcaaactaca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973952 24 + 135778131 TGTATAagaggtcatcaaactaca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740315 24 - 3013352 TGTATAagaggtcatcaaactaca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971521 24 + 8656713 TGTATAagaggtcgtcaaactaca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400206 24 - 190850796 TATGTAagaggccatcaaactaca i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483938 24 - 25294431 TATGTAagagatcatcaaactaca i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040523 23 - 6311556 TATGTAAAAGAT-ATcaaactaca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890845 21 + 15034901 TATGTAAGAG---ATcaaactaca i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26300523 24 - 93316391 TATATTAGAGGTCATCAAACTACA i micMur3.chr14 C 0 I 23 s otoGar3.GL873702 923336 24 - 3201129 TATGTTagaggttatcaaactaca i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018672 24 - 53741614 TTCATTGAAggtcatcaaactaca i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1705593 24 + 5974691 TATGTTagaggtcatcacactaca i dasNov3.JH569232 I 243 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=1545417.000000 s hg38.chr9_KI270719v1_random 23383 151 + 176845 aagcacagagctaatcaggccac----tgatgcattttggtaaacaaag-ttttattagaataaagtgacatccttttattttacttattgtttatggatacttatgcactacgatggcaaatactggtacttgtgacagagatcacatggcacgt s panTro5.chr4 135048149 151 + 194502333 aagcacagagctaatcaggccac----tgatgcattttggtaaacaaag-tcttattagaataaagtgacatccttttattttacatattgtttacggctacttatgcactacgatggcaaatgttggtacttgtgacagagatcacatggcacat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28721 151 - 70559 aagcacagagctaatcaggccac----tgatgcattttggtaaacaaag-ttttattagaataaagtgacatccttttattttacatattgtttacggctacttatgcactacgatggcaaatactggtacttgtgacagagatcacatggcacgt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442291 151 - 115148730 aaccacagagctaatcaggccac----taatgcattttggtaaacaaag-ttttattagaataaagtgacatccttttattttacatattgtttacagctacttatgcactatgatggcaaatattggtacttgtgacagagatcacatggcacat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384368 151 + 190429646 aaccacagagctaatcaggccac----tgattcattttggtaaacaaag-ttttattagaataaaatgacatcctttcattttacttattgtctacggctacttatgcactacaacggcaaatattggtacttgtgacagagatcacacagcacat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903361 151 + 189454096 aaccacagagctaatcaggccac----tgattcattttggtaaacaaag-ttttattagaataaaatgacatcctttcattttacttattgtctacagctacttatgcactacaacggcaaatattggtacttgtgacagagatcacacagcacat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894684 155 - 40319822 aaccacagagctaatcaggccactgattgattcattttggtaaacaaag-ttttattagaataaaatgacatcctttcattttacttattgtctacggctacttatgcactacaatggcaaatattggtacttgtgacagagatcacacagcacat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448480 151 - 9219162 aaccacagagctaatcaggccac----tgattcattttggtaaacaaag-ttttattagaataaaatgacatcctttcattttacttattgtctacggctacttatgcactacaacggcaaatattggtacttgttacagagatcacacagcacat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78973976 151 + 135778131 aaccacagagctaatcaggccac----tgattcattttggtaaacaaag-ttttattagaataaaatgacatccttttattttacttattgtctatggctacttatgcattacaacgacaaatattggtacttgtgacagagatcacacagcacat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740339 151 - 3013352 aaccacagagctaatcaggccac----tgattcatttaggtaaacaaag-ttttattagaataaaatgacatcctttcattttacttattgtctacggctacttatgcactacaatggcaaatattggtacttgtgacagagatcacacagcacat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971545 151 + 8656713 aaccacagagctaatcaggccac----tgattcattttggtaaacaaag-ttttattagaataaaatgacatccttttattttacttattgtctacggctacttacgcactacagcggcaaatattggtacttgtgacagagatcacacagcacat i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400230 146 - 190850796 aaccacagagctaatcaggccac----tgattgactttagtaaacaaag-ttttattagaataaagtgacatcc-----ttttatctattgtctatggctacttaagtactacaatggcacatatgagtacttgtgacagagatcacccggctcat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6483962 151 - 25294431 aactgcagagctaatcaggccac----taatttactttagtaagcaaag-ttttattagaataaagtgacatccttttattttatctattgtctatgtctacttaagtactacaatggcacatatgagtacttgtgacagagatcacttggcacat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040546 151 - 6311556 aactgcagagctaatcatgccac----tgatgtactttagtaagcaaag-ttttattagaataaagtgacattcttttattttatctattgtctagggctacttaagtactacaatggcacatatgagtacttgtgacagagatcacttggcacat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14890866 152 + 15034901 aaccacagagctaatcaggccac----tgacttactttagtaaacaaagttttttttagcataaagtgacatccttttattttatctattgtctatggctacttaagtactacaatggcacatatgagtacttgtgacagagatcacttggcacat i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 923360 151 - 3201129 taccacagcactaatcaggacca----ttatctaccatggtaaattaac-ttttattggattacagtgacatcattttattttacatattgtctatgactacttatgagctgcactggaagatattagcagctgtaatagagattacatagcccac i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018696 150 - 53741614 gatcacagaactaatcaggccca----tgacctgttttggtgaataaaa-ttttattggaatataacaacatcattat-ttttacatgttgtctatggccacttgtgatctacaatgacagattggaggagatataacacagaccatatggcacac i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1705617 149 + 5974691 gaccacggggcacaccaaaccta----tgacctattttggcaggtaaag-ttttatttgaatagaacaacaaccact-attttaagtattgtttatggcaactaatgtggtacaaagacaatgttttatacttgtgaaagagaccaca-ggtccat i dasNov3.JH569232 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26300547 23 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=63821.000000 s hg38.chr9_KI270719v1_random 23534 6 + 176845 acattc s panTro5.chr4 135048300 6 + 194502333 acattc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28872 6 - 70559 acattc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442442 6 - 115148730 acattc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384519 6 + 190429646 acattc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903512 6 + 189454096 acattc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894839 6 - 40319822 acattc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448631 6 - 9219162 acattc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78974127 6 + 135778131 acgttc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740490 6 - 3013352 acattc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971696 6 + 8656713 acattc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400376 6 - 190850796 accttc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6484113 6 - 25294431 accttc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040697 6 - 6311556 accttc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14891018 6 + 15034901 accttc i aotNan1.NW_018507635v1 C 0 I 4677 s micMur3.chr14 26300570 6 - 93316391 acattc i micMur3.chr14 I 23 C 0 s otoGar3.GL873702 923511 6 - 3201129 acaatc i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018846 6 - 53741614 acagtc i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1705766 6 + 5974691 gtagta i dasNov3.JH569232 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=6021167.000000 s hg38.chr9_KI270719v1_random 23540 473 + 176845 taaaatacttaatagttggcccttcac-gaaaggttttgAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTT-ATGAATCAG--C-TTTGCTTAGCATAGC------------------CATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTCCAATTATTTTAAGGTTTCATTATTAGGAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAGAATAGGTTACTGCTCTGTGGCATAGTTAGAATTTAAATGC-T-GTGGCTTTATAGAATTTAAAGGTAGGGTCTGTTTATTATGAATTATGCCTCCCATCATCTAGCTCATGTGAGGTAGTTCTGGAATAGCACATTATTTATGTTTGCTGATAATTTATTTTAGATATAATGGTTGGTT-AGGAAGGAGTTCATGGTGA s panTro5.chr4 135048306 473 + 194502333 taaaatacttaatagttggcccttcac-gaaaggttttgAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTT-ATGGATCAG--C-TTTGCTTAGCATAGC------------------TATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTCCAATTATTTTAAGGTTTCATTATTAGGAATGGTTCATTTAATTAAGCCATACTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTGTAGCATAGTTATAATTTAAATGC-T-GTGGCTTTATAGAATTTAAAGGTAGGGTCTGTTTATTATTAATTATGCCTCCCATCATCTAGCTCATGTGAGGTAGCTCTGGAACAGCACATTATTTATGTTTGCTAATAATTTATTTTAGATATAATGGTTGGTT-AGGAAGGAGTTCACGGTGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 28878 471 - 70559 taaaatacttaatagttggcccttcac-gaaaggttttgAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTT-ATGAATCAG--C--TTGCTTAGCATAGC------------------CATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTCCAATTATTTTAAGGTTTCATTATTAGGAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATA-GTTACTGCTCTGTGGCATAGTTATAATTTAAATGC-T-GTGGCTTTATAGAATTTAAAGGTAGGGTCTGTTTATTATGAATTATGCCTCCCATCATCTAGCTCATGTGAGGTAGTTCTGGAATAGCACATTATTTATGTTTGCTGATGATTTATTTTAGATATAATGGTTGGTT-AGGAAGGAGTTCATGGTGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442448 472 - 115148730 taaaatacttaatagttgg-ccttcac-gaaaggtttTGAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTC-ACGAATCAG--C-TTTGCTTAGCATAGC------------------CATGTTTGAAATCCTTTCTAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTCCAATTATTTTAAGGTTTCATTATTAGGAATGGTTCATTTAATTAAGCTATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTGTAGCATAGTTATAATTTAAATGC-T-GTGGCTTTATAGAATTTAAAGGTAGGGTCTGTTTCTTATTAATTATGCCTCCCATCATCTAGCTCATGTGAGGTAGCTCTGGAATAGCACATTATTTATGTTTGCTGATAATTTATTTTAGATATAATGGTTGGTT-AGGAAGGAGTTCATGGTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384525 469 + 190429646 taaaatacttaatagttggcccttcacagaaaGGTTTT-AGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTC-ATGAAT-----C-TTTGCAAAGCGTAGC------------------CATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTTCAATTATTTTAAGGTTTCATTATTAGCAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTCTAGCATAGTTATAATTTAAATGC-T-GTGGCTTTATAGAATTTAAAGGTAGAGTCTATTTATTATTAATTATGCCTCTCATCATCTAGCTCATGTGAGGTAGCTCTGGAATAGCACATTATTTATGTTTGCTTATAATTTATTTTAGATATAATGGTTGGTT-A-GAAGGAGTTCATGGTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903518 470 + 189454096 taaaatacttaatagttggcccttcacagaaaggttttgAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTC-ATGAAT-----C-TTTGCAAAGCATAGC------------------CATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTTCAATTATTTTAAGGTTTCATTATTAGCAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTCTAGCATAGTTATAATTTAAATGC-T-GTGGCTTTATAGAATTTAAAGGTAGAGTCTATTTATTATTAATTATGCCTCTCATCATCTAGCTCATGTGAGGTAGCTCTGGAATAGCACATTATTTATGTTTGCTTATAATTTATTTTAGATATAATGGTTGGTT-A-GAAGGAGTTCATGGTGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34894845 470 - 40319822 taaaatacttaatagttggcccttcacagaaaggttttgAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTC-ATGAAT-----C-TTTGCAAAGCGTAGC------------------CATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAAAAGAGTTCAATTATTTTAAGGTTTCATTATTATCAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTCTAGCATAGTTATAATTTAAATGC-T-GTGGCTTTATAGAATTTAAAGGTAGAGTCTATTTATTATTAATTATGCCTCTCATCATCTAGCTCATGTGAGGTAGCTCTGGAATAGCACATTATTTATGTTTGCTTATAATTTATTTTAGATATAATGGTTGGTT-A-GAAGGAGTTCATGGTGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4448637 470 - 9219162 taaaatacttaatagttcacccttcacagaaaggttttgAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTC-ATGAAT-----C-TTTGCAAAGCGTAGC------------------CATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTTCAATTATTTTAAGGTTTCATTATTAGCAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTCTAGCATAGTTATAATTTAAATGC-T-GTGGCTTTATAGAATTTAAAGGTAGAGTCTATTTATTATTAATTATGCCTCCCATCACCTAGCTCATGTGAGGTAGCTCTGGAATAGCACATTATTTATGTTTGCTTATAATTTATTTTAGATATAATGGTTGGTT-A-GAAGGAGTTCATGGTGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78974133 473 + 135778131 taaaatacttaatagttggcccttcacagaaaggttttgAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTC-ATGAATCAG--C-TTTGCAAAGCATAGC------------------CATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTCCAATTATTTTAAGGTTTCATTATTAGCTATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTCTAGCATAGTTATAATTTAAATGC-T-GTGGCTTTAACGAATTTAAAGGTAGAGTCTGTTTATTATTAATTATGCCTCCCATCATCTAGCTCATGTGAGGTAGCTCTGTAATAGCACATTATTTATGTTTGCTGATAATTTATTTTAGATATAATGGTTGGTT-A-GAAGGAGTTCATGGTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740496 470 - 3013352 taaaatacttaatagttcgcccttcacagaaaggttttgAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAATC-ATGAAT-----C-TTTGCAAAGCGTAGC------------------CATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTTCAATTATTTTAAGGTTTCATTATTAGCAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTGATAGGAAAATAGGTTACTGCTCTCTAGCATAGTTATAATTTAAATGC-T-GTGGCTTTATAGAATTTAAAGGTAGAGTCTATTTATTATTAATTATGCCTCCCATCATCTAGCTCATATGAGGTAGCTCTGGAATAGCACATTATTTATGTTTGCTTATAATTTATTTTAGATATAATGGTTGGTT-A-GAAGGAGTTCATGGTGC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5971702 473 + 8656713 taaaatacttaatagttggcccttcacagaaaggttttgAGAGCTACTGCTCTAGGAAATCTCAGGTTCAATGTCAGTC-ATGAATCAG--C-TTTGCAAAGTGTAGC------------------CATGTTTGAAATCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGAGTCCAATTATGTTAAGGTTTCATTATTAGGAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTCTAGCATAGTTATAATTTAAATGC-T-GTGGCTTTATAGAATTTAGAGGTAGAGTCTGTTTATTATTAATTGTGCCTTCCATCATCTAGCTCATGTGAGGTAGCTCTGGAATACCACATTATTTATGTTTGCTGATCATTTATTTTAGATATAATGGTTGTTT-A-GAAGGAGTTCATGGTGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400382 469 - 190850796 taaaatacttaatagttggcccttcacagaaagg-tttgAGAGCTACTGCCCTAAGGAATCTCAGGTTCAAAGTCAGTC-ATGAATCAG--A-TTTGCTTGGTGCGGC------------------CATGTTTTAATTCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGATTCAAATTA-TTTAAGGTTTCATTATTAGGAATAG-TCATTTAATTAAGCCATAGTTATTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTCTAGTGTAGTTATAATTTAAATGC-T-GTGGCTTTATATAATTTAAAGATAGAGTCTGTTTATTGTTAATTATGCTTCACATCATCTAGCTCATGTGAGATAGCTCTGGTATAGCACATTATTTACATTTACTGATGATTTATTTTAGATATAATGGATGGTT-AGGAAAGA--TCATGGTGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6484119 473 - 25294431 taaaatacttaatagttggcccttcacagaaaGG-CTTGAGAGCTACTGCCCCAGGGAATCTCAGGTTCAAAGTCAGTC-ATGAGTCAG--C-TTTGCTTAGCGTGGC------------------CATGTTTGAATTCCTTTCCAATGACAATTAATTGTT-ACTGCCTCTAGACAGAAGATTCCAATTATTTTAAGGTTTCATTATTAGGAATAG-TCATTTAATTAAGCCATAGTTATTACTTCAAGTATAATTAATTAGCGAAGGTATATTGCTTTTATGGGATATAATTAATAGAAAAATAGGTTACTGCTCTCTAGTATAGTTATAATTTAAATGC-T-GTGGCTTTATATAATTTAAAGATAGAGTGTGTTTATTGTTAATTATGCCTCATATCATCTAGCTCATGTGAGATAGCTCTGGTGTAGCACATTATTTACCTTTGCTGATTATTTACTTTAGATATAATGGTTGGTT-AGGAAAGAGTTCATGGTGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4040703 472 - 6311556 taaaatacttaatagttggcccttcacagaaaGG-CTTGAGAGCTACTGCCCTAGGAAATCTCAGGTTCAATGTCAGTC-ATGAATCAG--C-TTTGCTTAGCATGGC------------------CATGTTTGAATTCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGATTCCAATTATTTTAATGTTTCATTATTAGGAATAG-TCATTTAATTAAGCCATAGTTATTACTTCAAGTATAATTAATTAGTGAAGGTATATGGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTCTCGTATAGTTATAATTTAAATGC-T-GTGGCTTTATATAATTTAAAGATAGAGTTTGTTTATTGTTATTTATGCCTCACATCATCTAGCTCATGTGAGATAGCTCTGGCATAGCACATTATTTACATTTGCTGATGATTTATTTTAGATATAACGGTTGGTT-AGGAAAGAGTTCATGGTGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14895701 472 + 15034901 taaaATACTTAATAGTTGGCCCTTCACAGAAAGG-CTTGAGAGCTACTGCCCTAGGGAATCTCAGGTTCAAAGTCAGTC-ATGAATCAG--C-TTTGCTTAGCATGGC------------------CATGTTTGAATTCCTTTCCAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGATTCCAATTATTTTAAGGTTTCATTATTAGGAATAG-TCATTTAATTAAGCCATAGTTATTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGAAAATAGGTTACTGCTCTCTAGTATAGTTATAATTTAAATTC-T-GTGGCTTTATATAATTTAAAGATAGAGTCTGTTTATTGTTAATGATGCCTCACATCATCTAGCTCATGTGAAACAGCTCTGGTATAGCACATTATTTACATTTGCTGATGATTTATTTTAGATATAATGGTTGGTT-AGGAAAGAGTTCATGGTGA i aotNan1.NW_018507635v1 I 4677 C 0 s micMur3.chr14 26300576 472 - 93316391 taaaatatttaatagctggcccttcacagaaaga-tttgAGAGCTACTGCCCCAGGTAATCTCAGGTTCAATGTCACTA-GTGAATTAG--T-TTT-CTTAGTGTGGC------------------CATGTTTGATTTCCTTTCTAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGATTCCAATTATTTTAAGGTTTCATTATTAGGAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGGCAGATAGGTTACTGCTCTGTAGCATGGTTATAATTTAAATGCTT-GTGGCTTTATAGAATTTAAAGATAGAATCTGTTTATTATTAATTATGTCTCATACCATCTAGCTCATGTGATGTAGCTCTTGTGTAGTACATTATTTATGTTTGCTGACGATTTATTTCAGATATAATAGTTGGAT-A-GGAGGGATTCATAATGA i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 923517 473 - 3201129 taaaatatttaatagttgtaccttcacagaaaga-tttgAGAACTACTGCCCCAGGTAATCTCAGGTTCAATGTCACTA-GTGAATTAG--T-TTCGCTTAGTGTGGC------------------CATGTTTGATTTCCTTTCTAATGACAA-TAATTGTT-ACTGCCTCTAGACAGAAGACTCCAATTATTTTAAGGTTTCATTATTAAGAATGGTTCATTTAATTAAGCCATAGTTGTTACTTCAAGTATAATTAATTAGTGAAGGTATATTGCTTTTATGGGATATAATTAATAGG-AGATAGGTTACTGCACTGTACCATGATTATAATTTAAATGCTT-GTGGGTTTACAGAATTTAAAGATAGAATCTGTTTATTATTAATTATGTCTCACATCATCTAGCTCACGTGATATAGCTCTAGTGTAGTAAATTATTTATGTTTGCTGACAATTTATTTTAGACATAATAGTTGGATCA-GAAAGAATTTATGGTGA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44018852 471 - 53741614 taaaatatttggtatctggactttcacagaGGGC-TTTACAAACTACTGCCCTAGTTAATCTCAGGTTCAATGTCATCT-GTGAATCAG--TGTTTGCTTAGTGTAGC------------------CATGTTTGATTTTCTTTCTAATGAAAA-TAATTGTTAACTGCCTCTTGACAGAAGATTCCAATTATTTTGAAATTTCATTATTAGAAATGGTACACTTAATTAAGCGATAGCTGTTACTTCAAGTATAATTAATTAGTGCGGGTATATTGTTTTCATGGGATAAAATTAATAGGCAGATAGACTACTGCTCTGTAGCATAGTTATGACTTAAATAC-TCATGGCTTTATAAAATTTAAGGATGGAGTCTCTTTATTATCGGTTATTCCTTGTGTCATCTAGCTCATGTGATGTAGCTCTCGTGTAGCACATTATTTATG-TTGTTGATAGTTTATTTTA-ATATAATATTTGAAT-A---AGACTATCATGGGGA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1705772 489 + 5974691 taaaatatttagtatcttgctctttgaagaaaGG-TTGGAGAACTACTGCCTGAATTAATCTCACATTTAATGTCATTCAATGTGCCAGAAT-TTTGCTTAATGTGACTGTGTAGTTGTATTATATTATGTTTGATTTCCTTTCTAATGACAG-TAATTGCT-ACTGTCTCCACAGTGAAGATTTGAATTATTTTAAGGTTTCATTATTAGGAATAGTTCATTTAATTAAGCCATTGTTGTTACTTCAAGTATAGTTAATTAGTGCAGGTATATTGCTTTTAGGGGATATAATTAATAGTGAGATAGATTACTGCTCTTTAGCATGGttataatttaaatat-tcataactttataatatttaGGGATAGGGTCTGTTTATTATTAATTATGTCTCAAATACTCTAGTTCTTATGATGTAA--ATAATACAACACATTATTTATATTTTCTAATAGCTTG----AGATATGATAGTTTTAT-ACAAGATAATTCATGGTGA i dasNov3.JH569232 C 0 I 552 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=289337.000000 s hg38.chr9_KI270719v1_random 24013 33 + 176845 AGAAGGTAGATGTCACAAAAACATGCCTG-AAAT s panTro5.chr4 135048779 33 + 194502333 AGAAGGTAGATGTCACAAAAACATGCCTG-AAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 29349 33 - 70559 AGAAGGTAGATGTCACAAAAACATGCCTG-AAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442920 33 - 115148730 AGAAGGTAGAAGTCACAGAAACATGCCTG-AAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131384994 32 + 190429646 AGAAGGTAGAAGTCAC-AAAACATGCCTG-AAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130903988 32 + 189454096 AGAAGGTAGAAGTCAC-AAAACATGCCTG-AAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34895315 32 - 40319822 AGAAGGTAGAAGTCAC-AAAACATGCCTG-AAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449107 31 - 9219162 AGAAGGTAGAAGTCACAAAAACATGCCTG---AT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78974606 33 + 135778131 AGAAGGTAGAAGTCACAAAAACATGCCTG-AAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740966 31 - 3013352 AGAAGGTAGAAGTCACAAAAACATTCCTG---AT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972175 33 + 8656713 AGAAGGTAGAAGTCACAAAAACATGCCTG-AAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400851 34 - 190850796 AGAAAGTAGTAGTCATGAAAATGTGCCCAGAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6484592 34 - 25294431 AGAATGTAGAAGTCATGAAAATTTGCCTGGAAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041175 34 - 6311556 AGAGGGTGGAAGTCATGAAAATGTGTCTGGAAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896173 34 + 15034901 AGAAGGTAGAAGTCATGAAAATGTGCCTGGAAAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26301048 33 - 93316391 TTAAGGTAGAATTCACAAAAATGTGCCTG-AAAT i micMur3.chr14 C 0 I 151 s otoGar3.GL873702 923990 33 - 3201129 CTAAGGTAGAATTCACAAAAGTATACCTG-AAAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44019323 32 - 53741614 TTAAGGCAGAA-TCATGACAATATACCTG-AGAG i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=1369024.000000 s hg38.chr9_KI270719v1_random 24046 156 + 176845 GGTGATGGAGAAGACGAATCCGTGTATTTATTCATTTAATAAGTTATGTTGTCATTCAAGCAAATAAAAATAGTCTTTACTCTGAACATTCATATAAAA-TATC--TGTTGTATAATTAATCGTGTGCTTCTGAATAAAATAGATGAAAGCATAGTTTG s panTro5.chr4 135048812 157 + 194502333 GGTGATGGAGAAGACGAATCCATGTATTTATTCATTTAATAAATTATGTTGTCATTCAAGCAAATAAAAATAGTCTTTACCCTGAACATTCATATAAAAATATC--TGTTGTATAATTAATCGTGTGCTTCTGAATAAAATGGATGAAAGCATAGTTTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 29382 156 - 70559 GGTGATGGAGAAGACGAATCCATGTATTTATTCATTTAATAAATTATGTTGTCATTCAAGCAAATAAAAATAGTCTTTACTCTGAACATTCATATAAAA-TATC--TGTTGTATAATTAATCGTGTGCTTCTGAATAAAATGGATGAAAGCATAGTTTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90442953 157 - 115148730 GGTGATGGAGAAGATGAATCCATGTATTTATTCATTTAATAAATTATGTTGTCTTTTAAGCAAATAAAAACAGTGTTTACTCTGAACATTCATATAAAAATATC--TGTTATATAATTAATCGTATACTTCTGAATAAAATGGATGAAAGCATAGTTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131385026 155 + 190429646 TGTGATGGAGAACATGAATCCCTGTATTTATTCATTTAATAAATTATATTGTCATTTAAGCAAATAAAAATAGTTTTTACTCTGAGAATTGATATAAAA--ATA--TGTTATATAATTACTCATGTCCTTCTGAATAAAATGGATGAAAGCATAGTTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904020 155 + 189454096 TGTGATGGAGAACATGAATCCCTGTATTTATTCATTTAATAAATTATGTTGTCATTTAAGCAAATAAAAATAGTTTTTACTCTGAGAATTGATATAAAA--ATA--TGTTATATAATTACTCATGTCCTTCTGAATAAAATGGATGAAAGCATAGTTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34895347 155 - 40319822 TGTGATGGAGAACATGAATCCCTGTATTTATTCATTTAATAAATTATGTTGTCATTTAAGCAAATAAAAATAGTTTTTACTCTGAGAATTGATATAAAA--ATA--TGTTATATAATTACTCATGTCCTTCTGAATAAAATGGATGAAAGCATAGTTTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449138 154 - 9219162 TGTGATGGAGAACATGAATCCCTGTATTTATTCATTTAATAAATTATGTTGTCATTTAAGCAAATAAAAATAGTTTTTACTCTGAGAATTGATAT-AAA--ATA--TGTTATATAATTAATCATATCCTTCTGAATAAAATGGATGAAAGCATAGTTTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78974639 154 + 135778131 TGTGATGGAGAACATGAATCCATGTATTTATTCATTTAATAAATTATGTTGTCATTTAAGCAAATAAAACTAGTGTTTACTCTGAGAATTCATAT-AAA--ATA--TGTTATATAATTAATCATATCCTTCTGAATAAAATGGATGAAAGCATAGTTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2740997 155 - 3013352 TGTGATGGAGAACATGAATCCCTGTATTTATTCATTTAATAAATTATGTTGTCATTTAAGCAAATAAAAACAGTTTTTACTCTGAGAATTGATATAAAA--ATA--TGTTATATAATTAATCATATCCTTCTGAATAAAATGGATGAAAGCATAGTTTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972208 155 + 8656713 TGTGATGGAGAACATGAATCCATGTATTTATTCATTTAATAAATTATGTTGCCATTTAAGCAAATAAAGATAGTTTTTACTCTGGGAATTCATATAAAA--ATA--TGTTATATAATTAATCATATCCTTCTGAATAAAATGGATGAAAGCATGGTTTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129400885 153 - 190850796 GGTGATGGAGAAGATAAATCCATG----TATTCATTTAATAAATTATGTTTTCATTAAAGCAAATAAAAATAGTTTTTACTATGAACATTCTTATAAAA--ATATCTGTTATATAATTAATCTTATAATTCTGAATGAAATGGGTGAAAGCATCATTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6484626 153 - 25294431 GGTGATGGAGAAGATAAATCCATG----TATTCATTTAATAAATTATGTTTTCATTAAAGCAAATAAAAATAGTTTTTACTCTCAACATTCTTATAAAA--ATATCTGTTATATAATTAAGCTTATAATTCGGAATGAAATGGATGAAAGCATCGTTTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041209 153 - 6311556 AGTGATGGAGAAGATCAACCCATG----TATTCATTTAATAAATTATGTTTTCATTAAAGCAAATAAAAATAGTTTTTACTCTGAACATTCTTATAAAA--ATATTTGTTATATAATTAATCTTATAATTCTGAATGAAATGGACGAAAGCATCATTTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896207 151 + 15034901 GGTGATGGAGAAGGTAAATCCATG----TATTCATTTAATAAATTATGTTTTCATTAAAGCAAATAAAAACAGTTTTTACTCTGACCATTCTTATAAAA--ATA--TGTTATATAATTAATCTTATAATTCTGAATGAAATAGATGAAAGCATTATTTA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 924023 144 - 3201129 TGTGATGGAGAACATAGATCTGTA----TGTTCAATTAACAAATTATGCTGTCACTTAAGCAAATAGAAATTATTTTTATTCTCAACCTCCACATAAAA--A----GGTTACGTAATT----GTATACTTCTAAATAGAATGGATGAAAACATACCTT- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44019355 149 - 53741614 AATAACAAAGAAGATAAATCCATA----TATTCATTTACTAATATATGTTGTTATTTAAGCAAATACAAATAGTTTTCCCTGTCTGCAT--ATATATAA--ATC--TATCATGTAATTGATCTTATATCTCTGAATGAAATAGATTAAAACATAGTTTG i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26301081 151 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=706484.000000 s hg38.chr9_KI270719v1_random 24202 65 + 176845 --------------CATCATAAGCATTAATTCATTAAAATTTACCCTGAACATTGTTATTTGGTTTTATTAGC-AAGAAA s panTro5.chr4 135048969 65 + 194502333 --------------CATTATAAGCATTAATTCATTAAAATGTACCCTGGACATTGTTATTTGGTTTTATTAGC-AAGAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 29538 65 - 70559 --------------CATTATAAGCATTAATTCATTAAAATTTACCCTGAACATTGTTATTTGGTTTTATTAGC-AAGAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443110 65 - 115148730 --------------CATTATAAGCATTAATTCATTAAAATTTACCCTGAACATTGTTATTTGGTTTTATTAGC-AAGAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131385181 65 + 190429646 --------------CATTATAAGCATTAATTCATTAAAATTTACCCTGAACATTGTTATTTGGTTTTATTAGC-AAGAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904175 65 + 189454096 --------------CATTATAAGCATTAATTCATTAAAATTTACCCTGAACATTGTTATTTGGTTTTATTAGC-AAGAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34895502 65 - 40319822 --------------CATTATAAGCATTAATTCATTAAAATTTACCCTGAACATTGTTATTTGGTTTTATTAGC-AAGAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449292 65 - 9219162 --------------CATTATAAGCATTAATTCATTAAAATTTACCCTGAACATTGTTATTTGGTTTTATTAGC-AAGAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78974793 65 + 135778131 --------------CATTATAAGCATTAATTCATTAAAATTTACCCTGAACATTGATATTTGGTTTTATTAGC-AAGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741152 65 - 3013352 --------------CATTATAAGCATTAATTCATTAAAATTTACCCTGAACACTGTTATTCGGTTTTATTAGC-AAGAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972363 65 + 8656713 --------------CATTATAAGCATTAATTCATTAAAATTTACCCTGAACATTGTTATTTGGTTTTATTAGC-AAGAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401038 51 - 190850796 --------------CACTGTAAGC--------------ATTTACCCTGAACATTGTTATTTGGTCTTATTAGC-AAAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6484779 66 - 25294431 --------------CATTGTAAGCATTAAGTCATTAATATTTACCCTGAACATTGTTATTTGGTCTTATTAGCAAAAAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041362 65 - 6311556 --------------CACTGTAAGCATTAAGTCATTAATATTCATCCTGAACACTGTTATTTGGTCTTATTAGC-AAAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896358 63 + 15034901 --------------CACTGTAAGCATT--GTCATTAATATTTACCCTGAACATTGTTATTTGGTCTTATTAGC-AAAAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26301232 65 - 93316391 --------------CATTATAAGCATTAATTCTTTAAAATTTATCCTGAACATGATTATTTTCTTTTATTAAC-AAGAAA i micMur3.chr14 I 151 I 1019 s otoGar3.GL873702 924167 62 - 3201129 --------------CATTAGAAGCATTAATTCGTTAAAATTTACACTGAACGTGGTTATTTGCTTTTATTAAC-AAG--- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44019504 79 - 53741614 TGCCAGGTTGATGCAACTTTAAGCATTAATTCTCTAAAATATAGCCTGAAAACTGTTATTCAATTCTACTAGC-AAAAAT i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=116998.000000 s hg38.chr9_KI270719v1_random 24267 16 + 176845 TATAGCACTTGGAATG s panTro5.chr4 135049034 16 + 194502333 TATAGCACTTGGAATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 29603 16 - 70559 TATAGCACTTGGAATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443175 16 - 115148730 TACAGCACTTGGAATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131385246 16 + 190429646 TATAGCACTCAGAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904240 16 + 189454096 TATAGCACTCAGAATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34895567 16 - 40319822 TATAGCACTCAGAATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449357 16 - 9219162 TATAGCACTCAGAATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78974858 16 + 135778131 TATAGCACTCAGAATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741217 16 - 3013352 TATAGCACTCAGAATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972428 15 + 8656713 TACAGCA-TCAGAATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401089 16 - 190850796 TATTGCACTTGCAATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6484845 16 - 25294431 TTTTGCACTTGGAATG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041427 16 - 6311556 TATTGCACTTGGAATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896421 16 + 15034901 TATTACACTTGGAATG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 924229 8 - 3201129 --------TTAGAATG i otoGar3.GL873702 C 0 I 835 s canFam3.chr19 44019583 14 - 53741614 TCCAGC--TTGGGCTA i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26301297 1019 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=826144.000000 s hg38.chr9_KI270719v1_random 24283 98 + 176845 GTTTT---AGTAAACCATACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATACAGAATTTTCAGCATTATTATAATCTATTT-AAT-TATACATTCAGG s panTro5.chr4 135049050 94 + 194502333 GTTT----ATTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATACAGAATTTTCAGCATTATTATAATCTATTT-AAT-TACACATTCAGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 29619 94 - 70559 GTTT----ACTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATACAGAATTTTCAGCATTATTATAATCTATTT-AAT-TACACATTCAGG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443191 94 - 115148730 GTTT----ATTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATATAGAATTTTCAGCATTATTATAATCTATTT-AGT-TGCACATTCAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131385262 92 + 190429646 GC------ATTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATACAGAATTTTCAGCATTATTATAATCTATTT-AAT-TGCACATTCAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904256 92 + 189454096 GC------ATTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATACAGAATTTTCAGCATTATTATAATCTATTT-AAT-TGCACATTCAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34895583 92 - 40319822 GC------ATTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATACAGAATTTTCAGCATTATTGTAATCTATTT-AAT-TGCACATTCAGG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449373 92 - 9219162 GC------ATTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACTTAAAATACAGAATTTTCAGCATTATTATAATCTATTT-AAT-TGCACATTCAGG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78974874 94 + 135778131 GCTT----ATTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATATTGAATTTTCAGCATTATTATAATCTATTT-AAT-TGCACATTCAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741233 92 - 3013352 GC------ATTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATACAGAATTTTCAGCATTATTATGATTTATTT-AAT-TGCACATTCAGG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972443 95 + 8656713 GTTT----ATTAAA---TACATGTGAAGAACTCTAGATCATAAAGAACCTAAAATATAGAATTGTCAGCATTATTATAATCTATTT-ATTATGCACATTCAGG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401105 91 - 190850796 GTTT----AGCAAA---TACAGGTAAAGAACTCTAAATCATAAAGAACCTAAAATGTAGAATTTTCAGCATTATT---ACCTATTT-AAT-GGCACATTGAGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6484861 94 - 25294431 GTTT----AGTAAA---TATATGTAAAGAACTCTAGATCATAAAGAACCTAAAATGTAGAATTTTCAGCATTATTATCATCTGTTT-AAT-TGCACATTGAGG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041443 94 - 6311556 ATTT----AGCAAA---TACATATAAAGAACTCTAGATCATAAAGAACCTAAAATGTAAAATGTTCAGCATTATTATCATCTATTT-AAT-TGCACACTGAGG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896437 94 + 15034901 GTTT----AGTAAA---TACATGTAAAGAACTCTAGATAATAAAGAACCTAAAATGTAGAATTTTCAGCATTATTATCATCTATTT-AAT-TGCACATTGAGG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 925072 78 - 3201129 GTTTCAAACAAAAA---AAAATGTGACGAACTTTGG--CACAAAGAACCTAAAATGTAGAGT-----ACAT------------TTG-AAT-TGTAT-TTCAGG i otoGar3.GL873702 I 835 C 0 s canFam3.chr19 44019597 94 - 53741614 GGTT----AATAAA---TACAGGTGAAAAACT-TGGATTATAAAGACCCTAAAGTGTAGGGTCTCAAGCATTTTTTTAGTATATTTGGGT-TGTAAATTTAGG i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26301297 1019 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=2278707.000000 s hg38.chr9_KI270719v1_random 24381 226 + 176845 TTTATTTGTTACTGAAACTTAGTAACTTGATTTTGGGAGTTTTATAT--CGCTTCTGTGTCTTGTTTGTTTGCA-CAAGTTTGTTTATGGTGAAGTGCAAAGTATTTTAGTAAAAGGGATTTGAGCCACAGATGACAAATAATTAC-AGGAACATATAACATAAACTACACTTGGACTTTAAAGCAGGTTTAGATTATATTACTTTGGTTATTATTCTTTGTTTTCAAAA s panTro5.chr4 135049144 226 + 194502333 TTTATTTGTTACTGAAACTTAGTAACTTGATTTTGGGAGTTTTATAT--CGCTTCTGTGTCTTGTTTGTTTGCA-CAAGTTTGTTTATGGTGAAGTGCAAAGTAGTTTAGTAAAAGGGATTTGAGCCACAGATGACAAATAATTAC-AGGAACATATAACATAAACTACATTTGGACTTTAAAGCAGGTTTAGATTATATTACTTTGGTTATTATTCTTTGTTTTCAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 29713 226 - 70559 TTTATTTGTTACTGAAACTTAGTAACTTGATTTTGGGAGTTTTATAT--CGCTTCTGTGTCTTGTTTGTTTGCA-CAAGTTTGTTTATGGTGAAGTGCAAAGTATTTTAGTAAAAGGGATTTGAGCCACAGATGACAAATAATTAC-AGGAACATATAACATAAACTACACTTGGACTTTAAAGCAGGTTTAGATTATATTACTTTGGTTATTATTCTTTGTTTTCAAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443285 228 - 115148730 TTTATTTGTTACTGAAACTTAGTAACTTGCTTTTGGGAGTTTTATATAGAGCTTCTGTGTCTTGTTTGTTTGCA-CAAGTTTGTTTATGGTGAAGTGCAAAGTATTTTATTAAAAGGGATTTGAGCCACAGATGACAAATAATTAC-AGGAACATATAACATAAACTACACTTCGACTTTAAAGCAGGTTTAGGTTATATTACTTTGGTTATTATTCTTTGTTTTCAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131385354 217 + 190429646 TTTATTTGTTATTGAAACTTAGTCACTTGATTTTGGAAGTTTTCCAT--AGCTTCTG---------TGTTTGCA-CAAGTTTGTTTATGGTAAAGTGCAAAGTATTTTAGTAAAAGGGATTTGAGCCACAGATGACAAATAATTAC-AGGAACACATAACATAAACTACATTTGGACTTTAAAGCAGATTTAGATTATATTACTTTTGTTATTATTATTTGTTTCCAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904348 217 + 189454096 TTTATTTGTTATTGAAACTTAGTCACTTGATTTTGGAAGTTTTCCAT--AGCTTCTG---------TGTTTGCA-CAAGTTTGTTTATGGTAAAGTGCAAAGTATTTTAGTAAAAGGGATTTGAGCCACAGATGACAAATAATTAC-AGGAACACATAACATAAACTACATTTGGACTTTAAAGCAGATTTAGATTATATTACTTTTGTTATTATTATTTGTTTCCAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34895675 217 - 40319822 TTTATTTGTTATTGAAACTTAGTCACTTGATTTTGGAAGTTTTCCAT--AGCTTCTG---------TGTTTGCA-CAAGTTTGTTTATGGTAAAGTGCAAAGTATTTTAGTAAAAGGGATTTGAGCCACAGATGACAAATAATTAC-AGGAACACATAACATAAACTACATTTGGACTTTAAAGCAGATTTAGATTATATTACTTTTGTTATTATTATTTGTTTCCAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449465 217 - 9219162 TTTATTTGTTATTGAAACTTAGTCACTTGATTTTGGGAGTTTTCCAT--AGCTTCTG---------TGTTTGTA-CAAGTTTGTTTATGGTAAAGTGCAAAGTATTTTAGTAAAAGGGATTTGAGCCACAGATGACAAATAATTAG-AGGAACACATAACATAAACTACATTTGGACTTTAAAGCAGGTTTAGATTATATTACTTTTGTTATTAATCTTTGTTTCCAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78974968 217 + 135778131 TTTATTTGTTACTGAAACTTAGTCACTTGATTTTGGGAATTTT-AGT--AGCTTCTG---------TGTTTGCGTTAAGTTTGTTTATGGTGAAGCGCAAAGTATTTTAGTAAAAGGGATTTGAGCCACAGATGACAAATAATTAC-AGGAACACATAACATAAACTACATTTGGACTTTAAAGCAGGTTTAGATTATATTACTTTTGTTATTATTCTTTGTTTCCAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741325 217 - 3013352 TTTATTTGTTATTGAAACTTAGTCACTTGATTTTGGGAGTTTTCCAT--AGCTTCTG---------TGTTTGCA-CAAGTTTGTTTATGGTAAAGTGCAAAGTATTTTAGTAAAAGGGATTTGAGCCACAGATGACAAATAATTAC-AGGAACACGTAACATAAACTACATTTGGACTTTAAAGCAGGTTTAGATTATATTACTTTTGTTATTAATCTTTGTTTCCAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972538 217 + 8656713 TTTATTTGTTACTGAAACTTAGTCACTTGATTTTGGGAGTTTTACAT--AGCTTCTG---------TGTTTGCA-CAAGTTTGTTTATGGTGAAGTGCAAAGTATTTTAGTAAAAGGGATTTGAGTCACAGATGACAAATAATTAC-AGAAACACATAACATAAACTACATTTGGACTTTAAAGCAGGTTTAGATTATATTACTTTTGTTATTATTCTTTGTTTCCAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401196 221 - 190850796 TTTATTTGTTACT-AAACTTAGTAACTCGATTATGGGAGTTTTATAT--ACCTTCTGTGTCCTGTTTGTTTGCA-CAAGTTTGTTTATGGTGAAGTGCAAAGCATTTTAGTTAAAGGGATTTGAGGCACAGATGACAAATAATTAC-AGAAAAATATAACAT-AACTGCACATGGAATATAAAGCAGGTTTGGATTGTATTACTTTTG---TCATTTTTTGTTTCCAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6484955 225 - 25294431 TTTATTTGTTACTGAAACTTAGTAATTTGATTGTGGGAGTTTTATAT--ACCTTCTGTGTCCTGTTTGTTTGCA-CAAGTTTGTTTATGGTGAAGTGCAAAGCATTTTCGTTAAAGGGATTTGAGGCACCGATGACAAATAATTAC-AGAAAAATATAACAT-AACTGTACATGGAATATAAAGCAGGTCTGGATTGTATTACTTTTGTTATTATTTTTTGTTTCCAAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041537 225 - 6311556 TTTATTTGTTACTGAAACTTAGTAACTTGATTGTGGGAGTTTTATAT--ACCTTCTGTGTCCTGTTTGTTTGCA-CAAGTTTGTGTATGGTGAAGTGCAACGCATTTTAGTTAAAGGGATTTGAGGCACAGATGACAAATAATTAC-AGAATAATATAACAT-AAGTGCACATGGAATATAAAGCAGGTTTGGATTGAATTACTTTTGTTATTATTTTTTGTTTCCAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896531 225 + 15034901 TTTATTTGTTACTGAAACTTAGTAACTTGATTGTGGGAGTTTTATAT--ACCTTCTGTGTCCTGTTTGTTTGCA-CAAGTTTGTTTATGGTGAAGTGCAAAGCATTTTAGTTAAAGGGATTTGAGGCACAGATGACAAATAATTAC-AGAAAAATATAACAT-AATTGCACATGGAATATAAAACAGGTTTGGATTGTACTACTTTTGTTATTATTTTTTGTTTCCAAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26302316 225 - 93316391 TTTATTTGTTATTGAAATTTAATAAGTTGATTTTGGGAGTTTTATAT--AACTCCTATATCTCGCTTGTTTGCA-CAAGTTTGTATATTGCGAAGTGTCAAGTATTTTGGTAAAAGAGATTTGTGCCACAAATGAGAAGAAATTAT-AGAAACATATTACATAAACGTCTCAGGAACTTTGAAGCAGATTTGGGTCATATTACTTT-GTTATTATTCTCTGTTTTCAAAA i micMur3.chr14 I 1019 C 0 s otoGar3.GL873702 925150 224 - 3201129 TTTATTTATTAGTGAAACTTAATAAGTTGTTTTGGGGGGTTTTATAT--ATCTCCTATGCCTCACTTGTTTGCA-TAGG-TTGTATATGGTAAAATGTCAAGTATTTTGGTAAAAGACATTCAGGCCATAAGTTACATGAAATTAC-AGAGATATGTAATATTAACTGCTCATGAACTTTGAAATAGATTTGGGTGATATAACTTT-GCCATTATTCTTTGTTTTCAAAA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44019691 225 - 53741614 TTTGTTTGTTTCTATAATTTACCAAGT-GATAAGGGGAGTTACATAT--ACCTTCTAATTCTTGCTTGTTCACA-CAAGTTTGGATACAGTGGAATGTCATATGACACAGTAAAAGTGATTTGGGCTACAGATGACAAATAAGCATAAAGGACAAACAGCATAAGCTGCATAAGGACTTTAAAGCATATTTACCTTGTTTTACTTT-GTGATTATTTTTTGTTTCCAAAA i canFam3.chr19 C 0 I 46 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=150304.000000 s hg38.chr9_KI270719v1_random 24607 15 + 176845 GGGAATGATGGGTTA s panTro5.chr4 135049370 15 + 194502333 GGGAATGATGGGTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 29939 15 - 70559 GGGAATGATGGGTTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443513 15 - 115148730 GGGAATGATGAGTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131385571 15 + 190429646 GGGAATGATGGGTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904565 15 + 189454096 GGGAATGATGGGTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34895892 15 - 40319822 GGGAATGATGGGTTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449682 15 - 9219162 GGGAATGATGGGTTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975185 15 + 135778131 GGGAATGATGGGTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741542 15 - 3013352 GGGAATGATGGGTTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972755 15 + 8656713 GGGAATGATGGTTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401417 15 - 190850796 GGGAATGGTGGGTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6485180 15 - 25294431 GCAAATGGTGGGTTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041762 15 - 6311556 GGAAATGGTGGGTTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896756 15 + 15034901 GGGAATGGTGGGTTA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26302541 15 - 93316391 GGAAACAATGGGTTA i micMur3.chr14 C 0 I 53 s otoGar3.GL873702 925374 12 - 3201129 GGAAACAATGGG--- i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44019916 46 - 53741614 I a score=417780.000000 s hg38.chr9_KI270719v1_random 24622 56 + 176845 TAGCTTTATGCCCAAATATTTAGGCAAAACACGACAAAAGAAGGGTGAAGAGACCT s panTro5.chr4 135049385 56 + 194502333 TAGCTATATGCCCAAATATTTAGGCCGAACACTACAAAAGAAGGGTGAAGAGACCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 29954 56 - 70559 TAGCTATATGCCCAAATATTTAGGCAAAACACGACAAAAGAAGGGTGAAGAGACCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443528 56 - 115148730 TAGCTATATGCCCAAATATTTAGGCGAAACACTACAAAAGAAGGGTGAAGAGACCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131385586 56 + 190429646 TAGATATATGCCCAAATATTTAGGTGAAACACTACAAAAGAAAAGTGAAGATACCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904580 56 + 189454096 TAGATATATGCCCAAATATTTAGGTGAAACACTACAAAAGAAAAGTGAAGATACCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34895907 56 - 40319822 TAGATATATGCCCAAATATTTAGGTGAAACACTACAAAAGAAAAGTGAAGATACCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449697 56 - 9219162 TAGATATATGCCCAAATATTTAGGTGAAACACTACAAAAGAAAAGTGAAGATACCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975200 56 + 135778131 TAGATATATGCCCAAATATTTAGGTGAAACACTACAAAAGAAAGGTGAAGATACCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741557 56 - 3013352 TAGATATATGCCCAAATATTTAGGTGAAACACTACAAAAAAAAAGTGAAGATACCT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972770 56 + 8656713 TAGATATATGCCCAAATATTTAGGTGAAACATTACAAAAGAAAGGTGAAGATACCT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401432 54 - 190850796 TATC--TAAGCCAAAATTTTTAGATGAAACACTGCCAAAGAAGAGTGAAGAGAACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6485195 55 - 25294431 TAGCTATAAGCCAAAATTTTTAGATGAAAC-CTGCCAAAGAAGAGTGAAGAGACCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041777 56 - 6311556 TAGCTATAAGCCAAAATTTTGAGATGAAACACTGCCAAAGAAGAGTGAAGAGACCT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896771 54 + 15034901 TAGCTATAAGCCAAAATTTTTAGATGAAA--CTGCCAAAGAAGAGTGAAGAGACAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 925386 41 - 3201129 -----------CTAAATCTTTAGAGGAAA-ACTACAAAAGAGG---GAGTGGATCT i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26302556 53 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44019916 46 - 53741614 I a score=424220.000000 s hg38.chr9_KI270719v1_random 24678 40 + 176845 TTTATCTAATGGACAAAGTAGAAGGTAGCACTCATAAAAT s panTro5.chr4 135049441 40 + 194502333 TTTATCTAATGGCCAAAGTAGAAGGTAGCACTCATAAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 30010 40 - 70559 TTTATCTAATGGCCAAAGTAGAAGGTAGCACTCATAAAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443584 40 - 115148730 TTTATCTAATGGCCAAAGTAGAAGGTAGCACTCATAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131385642 40 + 190429646 TTTATCTAAGGGCCAAAGTAGAAAGTAGCACTCATAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904636 40 + 189454096 TTTATCTAAGGGCCAAAGTAGAAAGTAGCACTCATAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34895963 40 - 40319822 TTTATCTAAGGGCCAAAGTAGAAAGTAGCACTCATAAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449753 40 - 9219162 TTTATCTAAGGGCTAAAGTAGAAAGTAGCACTCATAAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975256 40 + 135778131 TTTATCTAAGGGCCAAAGTAGAAGGTAGCACTCATAAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741613 40 - 3013352 TTTATCTGAGGGCCAAAGTAGAAAGTAGCACTCTTAAAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972826 40 + 8656713 TTTATCTAAGGGCCAAAGTAGAAGGTAACACTCATAAAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401486 40 - 190850796 TTTATCTAATGGTCAAAATAGAAGGTAACACCCATAAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6485250 40 - 25294431 TTTATCTAATGGTCAAAATAGAAGGTAATACTCATAAAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041833 40 - 6311556 TTTATCTAATGGTCAAAATAGAAGGTAACACTCATAAAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896825 40 + 15034901 TTTATCTAATGGTCAAAATAAAAGGTAACACTCATAAAAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26302609 40 - 93316391 TTTATCTAATGGCCAAAATAGAAGGTGGAACTCATAAAAT i micMur3.chr14 I 53 I 49 s otoGar3.GL873702 925427 40 - 3201129 TTTCTATATTGGCCAAAATAGAAGAGAAAACTCATAAAAT i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44019916 46 - 53741614 I a score=395871.000000 s hg38.chr9_KI270719v1_random 24718 46 + 176845 ATA--CTG------TTTTGTGTAATAAGTGAATGGAATCTTTACACAA-TTTTTT-- s panTro5.chr4 135049481 46 + 194502333 ATA--CTG------TTTTGTGTAATAAGTGAATGGAATCTTTACACAA-TTTTTT-- i panTro5.chr4 C 0 I 1 s gorGor5.CYUI01001450v1 30050 46 - 70559 ATA--CTG------TTTTGTGTAATAAGTGAATGGAATCTTTACACAA-TTTTTT-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443624 46 - 115148730 ATA--CTG------TTTTGTGTAATAAGTGAATGGAATCTTTACACAA-TTTTTT-- i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 131385682 48 + 190429646 ATACTCTG------TTTTGTGTAATAAGTGAATGGAATCTTTGAACAA-TTTTTT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904676 48 + 189454096 ATACTCTG------TTTTGTGTAATAAGTGAATGGAATCTTTGAACAA-TTTTTT-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34896003 48 - 40319822 ATACTCTG------TTTTGTGTAATAAGTGAATGGAATCTTTGAACAA-TTTTTT-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449793 48 - 9219162 ATACTCTG------TTTTGTGTAATAAGTGAATGGAATCTTTGAACAA-TTTTTT-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975296 49 + 135778131 ATATTCTG------TTTTGTGTAATAAGTGAATGGAATCTTTGAACAATTTTTTT-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741653 48 - 3013352 ATACTCTG------TTTTGTGTAATAAGTGAATGGAATCTTTGAACAA-TTTTTT-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972866 49 + 8656713 ATACTCTG------GTTTGTGTAATAAGTGAATGGAATCTTTGAACAATTTTTTT-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401526 48 - 190850796 ATACTCTA------TGTTGTGTAATAAGTGAATAGGATCTTTACACAA-TATTTT-- i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6485290 48 - 25294431 ATGCTCTG------TTTTGTGTAATAAGTGAATAGGATCTTTACACAA-TATTTT-- i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4041873 48 - 6311556 ATACTCTG------TTTTGTGTAATAAGTGAATAGGATCTTTACACAA-TTTTTT-- i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14896865 48 + 15034901 ATACTCTG------TTTTGTGTAATAACTGAATAGGATCTTTACACAA-TATTTT-- i aotNan1.NW_018507635v1 C 0 I 1 s otoGar3.GL873702 925467 51 - 3201129 -----CTGCCGCATTTTTGAGTAATAAATGGATAAGATCTTTGTATAA-ATTTCTTG i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26302649 49 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44019916 46 - 53741614 I a score=564794.000000 s hg38.chr9_KI270719v1_random 24764 57 + 176845 GCTAGGGTTAATTGTTTAGGAAACTTTTCTAATTGGCAACTAC--TTCATAGAAAAACT s panTro5.chr4 135049528 57 + 194502333 GCTAGGGTTAATTGTTTAGGAAACTTTTCTAATTGGCCACTAC--TTCATAGAAAAACT i panTro5.chr4 I 1 C 0 s gorGor5.CYUI01001450v1 30096 57 - 70559 GCTAGGGTTAATTGTTTAGGAAACTTTTCTAATTGGCAACTAC--TTCATAGAAAAACT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443671 57 - 115148730 GCTAGGGTTAATTGTTTAGGAAACTTTTCTAATTGGCAACTAC--TTCATAGAAAAACT i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 131385730 57 + 190429646 GCTAGGTTTAATTGTTTAGGAAACTTTTCTAATTGGCAATTAC--TTCACAGAAAAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904724 57 + 189454096 GCTAGGTTTAATTGTTTAGGAAACTTTTCTAATTGGCAATTAC--TTCACAGAAAAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34896051 57 - 40319822 GCTAGGTTTAATAGTTTAGGAAACTTTTCTAATTGGCAATTAC--TTCACAGAAAAACT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449841 56 - 9219162 GCTGGGTTTAATTGTTTAGGAAACTTTTCTAATGGGCAATTAC--TTCACAG-AAAACT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975345 57 + 135778131 GCTAGGTTTAATTGTTTAGGAAACTTTTCTAATTGGCAATTAC--TTCACAGAAAAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741701 56 - 3013352 GCTGGGTTTAATTGTTTAGGAAACTTTTCTAATTGGCAATTAC--TTCACAG-AAAACT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972915 57 + 8656713 GCTAGGTTTAATTGTTTAGGAAACTTTTCTAATTGGCAATTAC--TTCACAGAAGAACT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401575 59 - 190850796 TCTAGCTTTAATTGTTTAGGAAACTTTTCTAATTGGCAATTACTTTTCATAGAAAAATT i calJac3.chr3 I 1 I 313 s saiBol1.JH378129 6485339 59 - 25294431 TCTAGCTCTAATTGTTTAGGAAACTTTTCTAATTGGCAATTACTTTTCATAGAAAAACT i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4041922 59 - 6311556 TCTAGCTTTAATTGTTTAGGAAACTTTTCTAATTGACAATTGCTTTTCATAGAAAAACT i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14896914 59 + 15034901 TCTAGCTTTAATTGTTTAGGAAACTTTTCTAATTGGCAATTACTTTTCATAGAAAAACT i aotNan1.NW_018507635v1 I 1 C 0 s micMur3.chr14 26302698 59 - 93316391 GCTAGGTTTAATTGTTTAGGAAACTTTTCTTATTAGTAATTTCTTTTCATAGAAAAACT i micMur3.chr14 I 49 C 0 s otoGar3.GL873702 925518 57 - 3201129 GCTGTGTTTAATTGTTTA-GAAACTTTTCTGATTGGTAATTACTTTCCATAGATATAC- i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44019916 46 - 53741614 I a score=193933.000000 s hg38.chr9_KI270719v1_random 24821 17 + 176845 TGATCCAGACCTATATG s panTro5.chr4 135049585 17 + 194502333 TGATCCAGACCTATATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 30153 17 - 70559 TGATCCAGACCTATATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443728 17 - 115148730 TGATCCAGACTTATATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131385787 17 + 190429646 TGATCCAGACCTATATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130904781 17 + 189454096 TGATCCAGACCTATATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34896108 17 - 40319822 TGATCCAGACCTATATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4449897 17 - 9219162 TGATCCAGACCTATATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975402 17 + 135778131 TGGTCCAGACCTATATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2741757 17 - 3013352 TGATCCAGACCTATATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5972972 17 + 8656713 AGATCCAGACCTATATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129401947 17 - 190850796 TGATCCAGACTTTTATG i calJac3.chr3 I 313 C 0 s saiBol1.JH378129 6485398 17 - 25294431 TGATCCAGATCTATATG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4041981 17 - 6311556 TGATCCAGACCTATATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14896973 17 + 15034901 TGATCCAGACCTATATG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26302757 17 - 93316391 TAACCCAAACCTATATG i micMur3.chr14 C 0 I 96 s otoGar3.GL873702 925575 17 - 3201129 TGATCTAGACCTACATG i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44019916 46 - 53741614 I a score=787467.000000 s hg38.chr9_KI270719v1_random 24838 90 + 176845 -TGGAACTTCCCTTTATATT-AACTTGCTGAAATTATTA---AAGTTAAAAGCTTGTTTTTCCAGGTTGATACTCTCAAGACCTACAAAG-ACCAG- s panTro5.chr4 135049602 90 + 194502333 -TGGAACTTCCCTTTATATT-ACCTTGCTGAAATTATTA---AAGTTAAAAGCTTGTTTTTCCAGGTTGATACTCTCAAGACCTACAAAG-ACCAG- i panTro5.chr4 C 0 I 1 s gorGor5.CYUI01001450v1 30170 90 - 70559 -TGGAACTTCCCTTTATATT-AACTTGCTGAAATTATTA---AAGTTAAAAGCTTGTTTTTCCAGGTTGATACTCTCAAGACCTACAAAG-ACCAG- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443745 90 - 115148730 -TGGAACTTCCCTTTATATT-AACTTGCTGAAATTATTA---AAGTTAAAGGCTTGTTTTTCCAGGTTGATACTCTCAAGACCTACAAAG-ACCAG- i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 131385804 90 + 190429646 -TGGAACTTCCCTTTATATT-AACTTGCTGAAATTATTA---AAGTTAAAAGCCTGTTTTTCCAGGTTAGTATTCTCAAGACCTACAAAG-AACAG- i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130904798 90 + 189454096 -TGGAACTTCCCTTTATATT-AACTTGCTGAAATTATTA---AAGTTAAAAGCCTGTTTTTCCAGGTTAGTATTCTCAAGACCTACAAAG-AACAG- i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34896125 90 - 40319822 -TGGAACTTCCCTTTATATT-AACTCGCTGAAATTATTA---AAGTTAAAAGCCTGTTTTTCCAGGTTAGTATTCTCAAGACCTACAAAC-AACAG- i macNem1.NW_012010911v1 C 0 I 1 s cerAty1.NW_012000798v1 4449914 90 - 9219162 -TGGAACTTCCCTTTACATT-AACTTGCTGAAATTATTA---AAGTTAAAAGCCTGTTTTTCCAGGTTAGTATTCTCAAGACCTACAAAG-AACAG- i cerAty1.NW_012000798v1 C 0 I 1 s chlSab2.chr7 78975419 90 + 135778131 -TGGAACTTCCCTTTATATT-AACTTGCTGACATTATTA---AAGTTAAAAGCCTGTTTTTCCAGGTTAGTATTCTCAAGACCTACAAAA-AACAG- i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012103277v1 2741774 90 - 3013352 -TGGAACTTCCCTTTATATT-AACTTGCTGAAATTATTA---AAGTTAAAAGCCTGTTTTTCCAGGTTAGTATTCTCAAGACCTACAAAG-AACAG- i manLeu1.NW_012103277v1 C 0 I 1 s colAng1.NW_012114544v1 5972989 90 + 8656713 -TGGAACTTCCCTTTATATT-AACTTGCTGAAATTATTA---AAGTTAAAAGCCTGTTTTTCCCAGTTAGTATTCTCAAGACCTACAAAG-AACAG- i colAng1.NW_012114544v1 C 0 I 1 s calJac3.chr3 129401964 93 - 190850796 -TGGAAATTCCCTTTAAATT-AACTTGCTGAAATTATTAACGAAGTTAAAAGCCTATTTTTCCAGACTGATACTCTCAAGACATACAAAA-AACAG- i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6485415 94 - 25294431 -TGGAACTCCTCTTTAAATT-AACTTGCTGAAATTATTAACAAAGTTAAAAGCCTATTTTTCCAGACTGATACTCTCAAGACATACAAAAGAACAG- i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4041998 93 - 6311556 -TGGAACTTCCCTTTAAATT-AACTTGCTGAAATTATTAACAAAGTTAAAAGCCTATTTTTCCAGACTGATGCTCTCAAGACATACAAAG-AACAG- i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14896990 90 + 15034901 -TGGAACTTCCCTTTAAATT-AACT---TGAAATTATTAACAAAGTTAAAAGCCTATTTTTCCAGACTGATACTCTCAAGACATACAAAG-AACAG- i aotNan1.NW_018507635v1 C 0 I 1 s otoGar3.GL873702 925592 96 - 3201129 GGGGAAATTCACCTTCTGTTCAATTTGCTGACATTATTAACAAAAGGAAAAGAGTATTTTCCCTGGTTGATACTCACCAAACCCAAGAAG-GACAAT i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26302774 96 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44019916 46 - 53741614 I a score=1541252.000000 s hg38.chr9_KI270719v1_random 24928 155 + 176845 CACATTGAAGCAATCAGTTGATTACCATCATGATGCCTGCGTATG-TTTATTTCATGTCAGACACACCTGAGGTCTGTAATTGAATACATAAAGAGTGCAACCATGGAAGAAACAAGGTTGGCTTGTGGTGCTCCTATGGCAGCATCAACACAACT s panTro5.chr4 135049693 155 + 194502333 CACATCGAAGCAATCAGTTGATTACCATCATGATGCCTGTGTATG-TTTATTTCATGTCGGACAAACCTGAGGTCTGTAATTGAATACATAAAGAGTGCAACCATGGAAGAAACGAGGTTGGCTTGTGGTGTTCCTATGGCAGCATCAACACAGCT i panTro5.chr4 I 1 C 0 s gorGor5.CYUI01001450v1 30260 155 - 70559 CACATTGAAGCAATCAGTTGATTACCGTCATGATGCCTGCGTATG-TTTATTTCATGTCAGACACACCTGAGGTCTGTAATTGAATACATAAAGAGTGCAACCATGGAAGAAACAAGGTTGGCTTGTGGTGTTCCTATGGCAGCATCAACACAGCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443836 155 - 115148730 CACATTGAAGCAATCAGTTGATTACCGTCATGATGCCTGTGTATG-TTTATTTCATGTCAGACACACCTGAGGTCTGTAATTGAATACATAAAGAGTGCAACCATGGAAGAAACGAGGTTGGCTTGTGGTGTTCTTACGGCATCATCAACACAGCT i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 131385895 155 + 190429646 CACTCTGAAGCAATCAGTTGATTACCCTCATGATGCCTGCATATG-TTTATTTCATGTCAGACACACCTGAGGTCTGTAATTTAATACATAAACAGTGCGACCATGGAAGAAATGAAGTTGGCTTGCGGTGTTCCTATGGCAGCATCAACACTGCT i rheMac8.chr5 I 1 C 0 s macFas5.chr5 130904889 155 + 189454096 CACTCTGAAGCAATCAGTTGATTACCCTCATGATGCCTGCATATG-TTTATTTCATGTCAGACACACCTGAGGTCTGTAATTTAATACATAAACAGTGCGACCATGGAAGAAATGAAGTTGGCTTGCGGTGTTCCTATGGCAGCATCAACACTGCT i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34896216 155 - 40319822 CACTCTGAAGCAATCAGTTGATTACCCTCATGATGCCTGCATATG-TTTATTTCATGTCAGACACACCTGAGGTCTGTAATTTAATACATAAACAGTGCGACCATGAAAGAAACGAAGTTGGCTTGCGGTGTTCCTATGGCAGCATCAACACTGCT i macNem1.NW_012010911v1 I 1 C 0 s cerAty1.NW_012000798v1 4450005 155 - 9219162 CACTCTGAAGCAATCAGTTGATTACCCTCATGATGCCTGCATATG-TTTATTTCATGTCAGACACACCTGAGGTCTGTAATTTAATACATAAACAGTGCGACCATGGAAAAAACGAAGTTGGCTTGCGGTGTTCCTATGGCAGCATCAACACTGTT i cerAty1.NW_012000798v1 I 1 C 0 s chlSab2.chr7 78975510 151 + 135778131 CACTTTGAAGCAATCAGTTGATTACCCTCATGATGCCTGCCTATG-TTTATTTCATGTCAGACACACCTGAG----GTAATTGAATACATAAACAGTGAGACCATGGAAGAAACGAATTTGGCTTGCGGTGTTCCTATGGCAGCATCAACACTGCT i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012103277v1 2741865 155 - 3013352 CACTCTGAAGCAATCAGTTGATTACCCTCATGATGCCTGCATATG-TTTATTTCATGTCAGACACACCTGAGGTCTGTAATTTAATACATAAACAGTGCGACCATGGAAGAAACGAAGTTGGCTTGCGGTGTTCCTATGGCAGCATCAACACTGCT i manLeu1.NW_012103277v1 I 1 C 0 s colAng1.NW_012114544v1 5973080 155 + 8656713 CACTCTGAAGCAATCAGTTGATTACCCTCAGGATGCCTGCATATG-TTTATTTCATGTCAGACACACCTGAGGTCTGTAATTGAATACATAAACAGTGCGACCATGGAAGAAACGAAGTTGGCTTGCGGTGTTCCTATAGCAGCATCAACACTGCT i colAng1.NW_012114544v1 I 1 C 0 s calJac3.chr3 129402058 155 - 190850796 CACATTGAAACAATCAGTTGATTACCCTCATGATGCCTGCATGTG-TTTGTTTCATGTCAGACACACCTGAGGTCTGTAACTGAATACATAAAGAGTGCGCTCGTGGAAGAAATGAGATTGGCTTAAGCTGGTCCTATGGCAGAATCAACGTAGCT i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6485510 155 - 25294431 CACATTGAAACAATCAGTTGATTACACTCATGATGCCTGCATATG-TTCGTTTCATGTCAGACACACCTGAGGTCTGTAACTGAATACATAAAGAGTGCGACCATGGAAGAAACAAGATTGGCTTATGCTGTTCCTTTGGCAGAATCAACACAGTT i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4042092 155 - 6311556 CACATTGAAACAATCAGTTGATTACCCTCATGATGCCTGCATATG-GTTGTTTCATGTCAGACACACCTGAGGTCTGTAACTGAATACATAAAGAGTGCGACCATGGAAGAAATGAGATTGGCTTATGCTGTTCCTATAGCAGAATCAACACAGCT i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14897081 156 + 15034901 CACATTGAAACAATCAGTTGATTACCCTCATGATGCCTGCAAAAGTTTTATTTCATGTCAGACACACCTGAGGTCTGTAACTGAATACATAAAGAGTGCGACCATGGAAGAAACGAGATTGGCTTATGCTGTTTCTATGGCAGAATCAACACAGCT i aotNan1.NW_018507635v1 I 1 C 0 s micMur3.chr14 26302870 155 - 93316391 CACACTGAAGCAATCTATTGATTGTCCTAATGATACCTGCATATG-TTTGTTTCATGTCAGACACACAAGTGATATATAATTGCATCCATAAAGAGTATGACCATAGAAGAAGTAAGATGGGGTTATGGTGTTCCTATAGCAGCATCAACACAACT i micMur3.chr14 I 96 I 46 s otoGar3.GL873702 925688 140 - 3201129 CACACTGAAGTCGTCTGTTGATTGCTCTCATGATGCCTGTGTATG-TCTGTTTCATGTCAGACCCTTTAGGCCTGT---------------GAGAGTTTGACCATAGAAGGAGTGAAATAGGCAGGTAGTGTTTCTGTAGCAGCATCAACACAGCT i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44019916 46 - 53741614 I a score=340125.000000 s hg38.chr9_KI270719v1_random 25083 34 + 176845 TCAAGTGCACCATGAGCATGAGCACTGCCAAGAA s panTro5.chr4 135049848 34 + 194502333 TCAAGTGCACCATGAGCATGAGCACTGCCAAGAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 30415 34 - 70559 TCAAGTGCACCATGAGCATGAGCACTGCCAAGAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90443991 34 - 115148730 TCAAGTGCACCATGAGCATGAGCACTGCCAAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131386050 34 + 190429646 TCAAGTGCACCATGAGCATGAGCACTGCCAAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130905044 34 + 189454096 TCAAGTGCACCATGAGCATGAGCACTGCCAAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34896371 34 - 40319822 TCAAGTGCACCATGAGCATGAGCACTGCCAAGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4450160 34 - 9219162 TCAAGTGCACCATGAGCATGAGCACTGCCAAGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975661 34 + 135778131 TCAAGTGCACCATGAGCATAAGCACTGCCAAGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2742020 34 - 3013352 TCAAGTGCACCATGAGCATGAGCACTGCCAAGAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5973235 34 + 8656713 TCAAGTGTACCATGAGCATGAGCACTGCCAAGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129402213 34 - 190850796 TCAAGTTCACCATTAGCAGGAGAGCTGCCAAGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6485665 34 - 25294431 TCAAGTGCACCATTAGCATGAGCACTGCCAAGAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4042247 34 - 6311556 TCAAGTGCACCATTAGCATGAGCACTGCCAAGAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14897237 34 + 15034901 TCAAGTGCACCATTAGCATGAGCACTGCCAAGAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 925828 34 - 3201129 TCAGACAGACCACGGGCAGGAACGCTGCCAACAA i otoGar3.GL873702 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26303025 46 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e canFam3.chr19 44019916 46 - 53741614 I a score=133794.000000 s hg38.chr9_KI270719v1_random 25117 14 + 176845 AATATATTGGC----TCT---- s panTro5.chr4 135049882 14 + 194502333 AATATATTGGC----TCT---- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 30449 14 - 70559 AATATATTGGC----TCT---- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90444025 14 - 115148730 AATATATTGGC----TCT---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131386084 14 + 190429646 AATATATTGGC----TCT---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130905078 14 + 189454096 AATATATTGGC----TCT---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34896405 14 - 40319822 AATATATTGGC----TCT---- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4450194 14 - 9219162 AATATATTGGC----TCT---- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975695 14 + 135778131 AATATATTGGC----TCT---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2742054 14 - 3013352 AATATATTGGC----TCT---- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5973269 14 + 8656713 AATATATTGGC----TCT---- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129402247 14 - 190850796 AATATATTGGT----TCT---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6485699 14 - 25294431 AATATATTGGC----TCT---- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4042281 14 - 6311556 AATATATTGGA----TTT---- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14897271 14 + 15034901 AATATATTGGC----TCT---- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 925862 14 - 3201129 ATTTTGTTGTC----TTT---- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44019962 22 - 53741614 AATTTCTTGGCTAGTTCTTACC i canFam3.chr19 I 46 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26303025 46 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=549794.000000 s hg38.chr9_KI270719v1_random 25131 43 + 176845 CAACTCTCAGAATACTGCCATGTCTAGAACTTTTGGCCTTGCC s panTro5.chr4 135049896 43 + 194502333 TAACTCTCAGAATACTGCCATGTCTAGAACTTTTGGCCTTGCC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 30463 43 - 70559 CAACTCTCAGAATACTGCCATGTCTAGAACTTTTGGCCTTGCC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90444039 43 - 115148730 CAACTCTCAGAATACTGCCATGTCTAGAACTTTTGGCCTTGCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131386098 43 + 190429646 CAACTCTCAGAGTACTGCCATGCCTAGAACTTTTGGCCTTGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130905092 43 + 189454096 CAACTCTCAGAGTACTGCCATGCCTAGAACTTTTGGCCTTGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34896419 43 - 40319822 CAACTCTCAGAGTACTGCCATGCCTAGAACTTTTGGCCTTGCC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4450208 43 - 9219162 CAACTCTCAGAATACTGCCATACCTAGAACTTTTGGCCTTGCC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975709 43 + 135778131 CAACTCTCAGAATACTGCCATGCCTAGAACTTTCGGCCTTGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2742068 43 - 3013352 CAACTCTCAGAATACTGCCATGCCTAGAACTTTAGGCCTTGCC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5973283 43 + 8656713 CAACTCTCAGAATACTGCCATGCTTAGAACTTTTGGCCTTGCC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129402261 43 - 190850796 CAACTCTCAGACAACTGCCATGCCTAGAACTTTTGGCCTTGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6485713 43 - 25294431 CAACTCTCAAAATACTGCCATGCCTAGAACTTTTGGCCTTGCC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4042295 43 - 6311556 CAACTGTCAGAATACTGCCATGCCTAGAGCTTTTGGCCTTGCC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14897285 43 + 15034901 CAACTCTCAGAATACTGCCATGCCTAGAACTTTTGGCCTTGCC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26303071 43 - 93316391 CAACTCTCAGAATACTGCTATGCCTACAACTCTTGCCCTTGCC i micMur3.chr14 I 46 I 1413 s otoGar3.GL873702 925876 43 - 3201129 CAACTCTCAGAATACTGCCATGCCCAGAACATTTGCCCTTGCC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44019984 43 - 53741614 CAACTCTCAGGTTACTGGCATGTCTAGAATTTTTGGCTTTGCC i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=10191504.000000 s hg38.chr9_KI270719v1_random 25174 1099 + 176845 AACCACTGGGCAGTAAGAG-ACA-GTAACAAATCACAGCAGATACTGTTTCCTTAGAGCAATTAAATTACATCAG-AAAAACTAAGCTGAGTGAt----aacaaaacaatttctaaatgtcaggagcct-atatcaattc--attcat--aagttgctcatttcacatgtcctt--ggtgttgcttatgattct-actcatgggtcattgtcacctttat---accaggatctaga-ggacaaagcagccactccagaacattgaaagttactgtagtcgaggaaaaaaagaatgt--tgtgaggcacgctctgaatttttgcctctagaaggaaacagacactttag-tctactaacatttcaataagcaaaaggaaatcacattccataactgaattaaacagggcagtgagctatatcctaccatgtgtgtgaagaagccaaaaaatat--------gta----------agcaatcctaatgtttatcacCTTAAATTTATCCATGCATGCTACTGTGGTCACTTTCACTGTAAAAGCAGTCATTGCAGAATCATCACCAGTATCTCAGT----ATATTAGTCAGGGCAATTAATATTAGTTTC---TGAACC-------AAACTGCAAATATCTGTGACTTAACACAATT---TTTTTTCTTCTCATTCATATAATAATTCAGTAGAGGAT-T-AACTTTCTGAAATTCCTTAAACGTTttcacagaa---tactctgcatttaatataaagagg-----agtatgagaagcattgcatgaggtatct---tatagctcagtctaaaagtgggaaatataacttctacctacatttcattcaccagTGAAATGGTCTCATCCTACCTGCAATTGAGGCTGAAAAATACAGCATTTTCTTGTGGTCCAAA-GAAGGAAATAAT---GTTACC---TCACCAATCTCTGTCAAGgtcagtccttctgatgccaaaatacctgctttaatcttcctcccattataaaacacactgact---tctctcaaaatg-aaaaatgcagagttctt--tcaaggtctggcatccagctcaaaatgtagtatctctggccactcataattctcccagtgaagtccagataaggtcctcatttctcagtaaaatctaaacttaaaagaataaatatgtgtcctgtgt s panTro5.chr4 135049939 1105 + 194502333 AACCACTGGGCAGTAAGAG-ACA-GTAACAAATCACAGCAGATACTGCTTCCTTAGAGCAATTAAATTACATCAG-AAAAACTAAGCTGAGTGAt----aacaaaacaatttcgaaatgtcaggagcct-aaattaattc--attcat--aagttgctcatttcacatgtccat--ggtgttgcttatgactct-actcatgggtcattgtcacctttat---accaggatctagg-ggacaaagcagccactccagaacattgaaagttactgtagtcaaggaaaaaaagaatgt--tgtgaggcacactctgaattttcacctctagaaggcaacagacactttag-tctactaacatttcaataagcaaaaggaaatcacattctataactgaattcaacagggcagtgagctatatcctaccatgtgtatgaagaagccaaaaaatat--------gta----------agcaatcctaatgtttatcacCTTAAATTTATCCATGCATGATACTGTGTTCTCTTTCACTGTAAAAGCAGTCATTGCAGAATCATCACTAGTATCTCAGT----ATATTAGTCAGGGTAATTAACATTAGTTTC---TGAACC-------AAACTGCAAATATCTGTGACTTAACACAATT---TTTTTTCTTCTCATTCATATAATAATTCAGTAGAGGAT-T-AACTTTCTGAAATTccttaaaggttttcactgaa---tcctctgcatttaatataaagagg-----agtatgagaagcattgtgtgaggtatct---tatagctcagtctaaaagtgggaaataaaactttaacctacatttcattcaccagtgaaatggtctcgtcctacctgcatctgaggctgaaaaatacagcatttccgtatggtccaaa-ggaggaaataat---gttatcatctcaccagtctctgtcaAGgtcagtccttctgatgccaaagtatctgctttaatcttcctctcattataaaacacaccgactgctcctctcaaaata-aaaaatgcagagttctt--tcaaggtctggcatcaagctcaaaatttagtatctccggccactcataattctcccaatgaagtccagataaggtcctcatttctcagtaaaatctaaacttaaaagactaaatatgtgtcctgtgt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 30506 1098 - 70559 AACCACTGGGCAGTAAGAG-ACA-GTAACAAATCACAGCAGATACTGTTTCCTTAGAGCAATTAAATTACATCAG-AAAAACTAAGCTGAGTGAt----aacaaaacaatttctaaatgtcaggagcct-atatcaattc--attcat--aagttgctcatttcacatgtcctt--ggtgttgcttatgattct-actcatgggtcattgtcacctttat---accaggatctaga-ggacaaagcagccactccagaacattgaaagttactgtagtcaaggaaaaaaagaatgt--tgtgaggcacgctctgaatttttgcctctagaaggaaacagacactttag-tctactaacatttcaataagcaaaaggaaatcacattccataactgaattaaacagggcagtgagctatatcctaccatgtgtatgaagaagccaaaaaatat--------gta----------agcaatcctaatgtttatcacCTTAAATTTATCCATGCATGCTACTGTGGTCACTTTCACTGTAAAAGCAGTCATTGCAGAATCATCACTAGTATCTCAGT----ATATTAGTCAGGGCAATTAATATTAGTTTC---TGAACC-------AAACTGCAAATATCTGTGACTTAACACAA-T---TTTTTTCTTCTCATTCATATAATAATTCAGTAGAGGAT-T-AACTTTCTGAAATTccttaaaggttttcactgaa---tcctctgcatttaatataaagagg-----agtatgagaagcattgcgtgaggtatct---tatagctcagtctaaaagtgggaaatataacttctacctacatttcattcaccagTGAAATGGTCTCATCCTACCTGCAATTGAGGCTGAAAAATACAGCATTTTCTTGTGGTCCAAA-GAAGGAAATAAT---GTTATC---TCACCAATCTCTGTCAAGgtcagtccttctgatgccaaaatacctgctttaatcttcctcccattataaaacacaccgact---tctctcaaaatg-aaaaatgcagagttctt--tcaaggtctggcatccagctcaaaatgtagtatctctggccactcataattctcccagtgaagtccagataaggtcctcatttctcagtaaaatctaaacttaaaagaataaatatgtgtcctgtgt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90444082 1104 - 115148730 AGCCACTGGGCAGTAAGAG-ACA-GTAACAAATCACAGCAGATACTGCTTCCTTAGAGCAATTAAATTACATCAG-AAAAACTAAGCTGAATGAt----aacaaaacaatttctaaatgtcaggagcct-aaatcaattc--attcat--aagttgctcatttcacatgtccat--gatgttgcttatgtctct-actcacgggtcattgtcacctttat---atcaggatctagg-ggacaaagcagccactccagaacattgaaagttactgtactcaaggaaaaaaagaatgt--tttgaggcacactctgaattttcgcctctagaaggaaatagacactttag-tctactaacatttcaataagcaaagggaaatcacattctataactaaattcagt-gggcagtgagctatatcctaccacgtgtatgaagaagccaaaaaatac--------gta----------agcaatcctaatgtttatcacCTTAAATTTATCCATGCATGCTACTGTGGTCACTTTCACTGTAAAAGCAGTCATTGCAGAATCATCACCATTATCTCAGT----ATATTAGTCAGGGTAATTAATATTAGTTTC---TGAACC-------AAACTGCAAATATCTGTGACTTAACACAATT---TTTTTTCTTCTCATTCATATAATAATTCAGTAGAGGAT-T-AACTTTCTGAAATTccttaaaggttttcactgaa---tcctctgcatttaatataaagagg-----agtatgagaagcattgcgtgaggtatct---tatagctcagtctaaaagtgggaaatataacttctacctacatttcattcaccagTGAAATGGTCTCATCCTACCTGCAATTGAGGCTGAAAAATACAGCATTTCCGTATGGTCCAAA-GAAGGAAATAAT---GTTATCATCTCACCAATCTCTGTCAAGgtcagtccttctgatgccaaagtatctgctttaatcttcctcccattataaaacacaccgacttctcctctcaaaatg-aaaaatgcagagttctt--tcaaggtctggcatcccgctcaaaatttagtatctccgaccactcatgattctcccaatgaagtccagataaggtcctcatttctcagtaaaatctaaacttaaaagactaaatatgtgtcctgtgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131386141 1102 + 190429646 AGCCACTGGACAGTAAGAG-ACG-GTAACACATCACAGCAGATATTGTTTCCTTAG-GCAATTGAATTACATCAG-AAAAACTAAGCTGAGAGAt----aacaaaacaattttgaaatgtcaggagact-aaatcaattc--attcat--aagttactaatttcacatgtccat--ggtgttgcttatgattct-actcatgggtcattgtcacctttat---accaggatctagg-ggacaaagcagcgactccagaacattgaaagtcactgtagtcaaag-aaaaaagaatgt--tgtcaggcacactcagaaattttgcctctagaaggaaacagacactttag-tctactaacatttcaataagcaaaaggaaatcacatgctataagtgaattcagcagggcagtgagctatatcctaccatgtgtatgaagaacccaaaaaatac--------gta----------agcaatcctaatgtttatcacCTTATATTTATCCATGCATGCTATTGTGGTCACTTTCACTGTAAAAGTAGTCATTGCAGAATCATCACTAGGATCTCACT----GTATT----AGGGTAATTAATACTAGTTTC---TGAATc-------aaactgcaaatatcagtgacttaacacaattt-gttttttcttctcattcatatcacagttcagtAGAGGAT-T-AACTTTCTGAAATTccttaaaggttttcactaaa---tcctctgcatttagtataaagagg-----agtatgagaagcatcgcatgaggtatct---tatagctcggtctaaaagtggcaaatataacttctacctacatttcattcacaagtgaaatggtctcatcctaactgcaattgaggctgaaaaatgcagcatttccgtatggtctgaa-gaaggaaataat---gttatcatctcaccaatctctgtcaAGgtcagtccttctgatgccaaagtatccactttaatattcctcccattataaaacacaccgacttctcctctcaaaatgaaaaaatgcagagttctt--tcaaggtctggcatccagctgaaaatttagtatctctggccactcataattctcccagtgaagtccagataaggtcctcatttctcagtaaaatctaaacttaaaagactaaatatgtgtcctgtgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130905135 1102 + 189454096 AGCCACTGGACAGTAAGAG-ACG-GTAACACATCACAGCAGATATTGTTTCCTTAG-GCAATTGAATTACATCAG-AAAAACTAAGCTGAGAGAt----aacaaaacaattttgaaatgtcaggagact-aaatcaattc--attcat--aagttactaatttcacatgtccat--ggtgttgcttatgattct-actcatgggtcattgtcacctttat---accaggatctagg-ggacaaagcagcgactccagaacattgaaagtcactgtagtcaaag-aaaaaagaatgt--tgtcaggcacactctgaaattttgcctctagaaggaaacagacactttag-tctactaacatttcaataagcaaaaggaaatcacatgctataagtgaattcagcagggcagtgagctatatcctaccatgtgtatgaagaacccaaaaaatac--------gta----------agcaatcctaatgtttatcacCTTATATTTATCCATGCATGCTATTGTGGTCACTTTCACTGTAAAAGTAGTCATTGCAGAATCATCACTAGGATCTCACT----GTATT----AGGGTAATTAATACTAGTTTC---TGAATc-------aaactgcaaatatcagtgacttaacacaattt-gttttttcttctcattcatatcacagttcagtAGAGGAT-T-AACTTTCTGAAATTccttaaaggttttcactaaa---tcctctgcatttagtataaagagg-----agtatgagaagcatcgcatgaggtatct---tatagctcggtctaaaagtggcaaatataacttctacctacatttcattcacaagtgaaatggtctcatcctaactgcaattgaggctgaaaaatgcagcatttccgtatggtctgaa-gaaggaaataat---gttatcatctcaccaatctctgtcaAGgtcagtccttctgatgccaaagtatccactttaatattcctcccattataaaacacaccgacttctcctctcaaaatgaaaaaatgcagagttctt--tcaaggtctggcatccagctgaaaatttagtatctctggccactcataattctcccagtgaagtccagataaggtcctcatttctcagtaaaatctaaacttaaaagactaaatatgtgtcctgtgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34896462 1101 - 40319822 AGCCACTGGACAGTAAGAG-ACG-GTAACACATCACAGCAGATATTGTTTCCTTAG-GCAATTGAATTACATCAG-AAAAACTAAGCTGAGAGAt----aacaaaacaattttgaaatgtcaggagact-aaatcaattc--attcat--aagttactaatttcacatgtccat--ggtgttgcttatgattct-actcatgggtcattgtc-cctttat---accaggatctagg-ggacaaagcagcgactccagaacattgaaagtcactgtagtcaaag-aaaaaagaatgt--tgtcaggcacactctgaaattttgcctctagaaggaaacagacactttag-tctactaacatttcaataagcaaaaggaaatcacatgctataagtgaattcagcagggcagtgaactatatcctaccatgtgtatgaagaacccaaaaaatac--------gta----------agcagtcctaatgtttatcacCTTATATTTATCCATGCATGCTATTGTGGTCACTTTCACTGTAAAAGTAGTCATTGCAGAATCATCACTAGGATCTCACT----GTATT----AGGGTAATTAATACTAGTTTC---TGAATc-------aaactgcaaatatcagtgacttaacacaattt-gttttttcttctcattcatatcacagttcagtAGAGGAT-T-AACTTTCTGAAATTccttaaaggttttcactaaa---tcctctgcatttagtataaagagg-----agtatgagaagcatcgcatgaggtatct---tatagctcggtctaaaagtggcaaatataacttctacctacatttcattcacaagtgaaatggtctcatcctaactgcaattgaggctgaaaaatgcagcatttccgtatggtctgaa-gaaggaaataat---gttatcatctcaccaatctctgtcaAGgtcagtccttctgatgccaaagtatccactttaatattcctcccattataaaacacaccgacttctcctctcaaaatgaaaaaatgcagagttctt--tcaaagtctggcatccagctgaaaatttagtatctctggccactcataattctcccattgaagtccagataaggtcctcatttctcagtaaaatctaaacttaaaagactaaatatgtgtcctgtgt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4450251 1102 - 9219162 AGCCACTGGACAGTAAGAG-ACG-GTAACACATCACAGCAGATATTGTTTCCTTAG-GCAATTGAATTACATCAG-AAAAACTAAGCTGAGAGAt----aacaaaacaattttgaaatgtcaggagact-aaatcaattc--attcat--aagttactaatttcacatgtccat--ggtgttgcttatgattct-actcatgggtcattgtcacctttat---accaggatctagg-ggacaaagcagcgactccagaacattgaaactcactgtagtcaaag-aaaaaagaatgt--tgtcaggcacactctgaaattttgcctctagaaggaaacagacactttag-tctactaacatttcaataagcaaaaggaaatcacatgctataagtgaattcagcagggcagtgagctatatcctaccatgtgtatgaagaacccaaaaaatac--------gta----------agcaatcctaatgtttatcacCTTATATTTATCCATGCATGCTATTGTGGTCTCTTTCACTGTAAAAGTAGTCATTGCAGAATCATCACTAGGATCTCACT----GTATT----AGGGTAATTAATACTAGTTTC---TGAATc-------aaactgcaaatatcagtgacttaacacaattt-gttttttcttctctttcatatcacagttcagtAGAGGAT-T-AATTTTCTGAAATTccttaaaggttttcactaaa---tcctctgcatttagtataaagagg-----agtatgagaagcatcccatgaggtatct---tatagctcggtctaaaagtggcaaatataacttctacctacatttcattcacaagtgaaatggtctcatcctacctgcaattgaggctgaaaaatgcagcatttccgtatggtctgaa-gaaggaaataat---gttatcatctcaccaatctctgtcaAGgtcagtccttctgatgccaaagtatccactttaatattcctcccattataaaacacaccgacttctcctctcaaaatgaaaaaatgcagagttctt--tcaaggtctagcatccagctgaaaatttagtatctctagccactcataattctccctgtgaagtccagataaggtcctcatttctcagtaaaatctaaacttaaaagactaaatatgtgtccggtgt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78975752 1099 + 135778131 AACTACTGGGCAGTAAGAG-ACG-GTAACACATCACAGCAGATATTGTTTCCTTAG-GCAATTGAATTACATCAG-AAAAACTAAGCTGATAGAt----aacaaaacaatttcgaaatgtcacgagact-aaatcaattc--attcat--aagttactcatttcatatgtccat--gatgttgcttatgactct-actcatggttcattgtcacctttat---accaggatctagg-ggacaaagcagccactccagaacattgaaagtcactgtagtcaagg-aaaaaagaatgt--tgtgaggcacattctgaaattgtgcctctagaaggaaacagacactttcg-tctactaacatttcaataagcaaaaggaaatcacatgctataactgaattcagcagggcagtgagctatatcccaccatgtgtatgaagaacccaaaaaatat--------ata----------agcaatactaatgtttatcaTCTTATATTTATCCATGCATGCTATTGTGGTCACTTTCACTGTAAAAGTAGTCATTGCAGAATCATCACTAGGATCTCACT----GTATT----AGGGTAATTAATACTAGTTTC---TGAATC-------AAACTGCAA--ATCAGTGACTTAACACAATTT-GTTTTTTCTTCTCATTCATATCACAGTTCAGTAGAGGAT-T-AACTTTCTGAAATTCCTTAAAGGTTTTCACTGAA---TCCTCCGCATTTagcataaagagg-----agtatgagaagcatcacatgaggtatct---tatagctcagtctaaaagtggcaaatataacttctacctacatttcattcacaagtgaaatggtctcatcctacctgcaattgaggctgaaaaatgcagcatttccgtatggtccaaa-gaaggaaataat---gttatcatctcaccaatctctgtcaAGgtcagtcattctgatgccaaagtatctgctttaatattcctcccattataaaacacgccgacttcccctctcaaaatg-aaaaatgcagagttctt--tcaaggtctggcatccagttgaaaatttagtatctctggccactcataattctcccaatgaagtccagataaggtcctcatttctcagtaaaatctaaacttaaaagactaaatatgtgtcctgtgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2742111 1102 - 3013352 AGTCACTGGACGGTAAGAG-ACG-GTAACACATCACAGCAGATATTGTTTCCTTAG-GCAATTGAATTACATCAG-AAAAACTAAGCTGAGAGAt----aacaaaacaattttgaaatgtcaggagact-aaatcaattc--attcat--aagttactaatttcacatgtccat--ggtgttgcttatgattct-actcatgggtcattgtcacctttat---accaggatctagg-ggacaaagcagcgactccagaacattgaaactcactgtagtcaaag-aaaagagaatgt--tgtcaggcacactctgaaattttgcctctagaaggaaacagacactttag-tctactaacatttcaataagcaaaaggaaatcacatgctataagtgaattcagcagggcagtgagctatatcctaccatgtgtatgaagaacccaaaatatac--------gta----------agcaatcctaatgtttatcacCTTATATTTATCCATGCATGCTATTGTGGTCACTTTCACTGTAAAAGTAGTCATTGCAGAATCATCACTAGGATCTCACT----GTATT----AGGGTAATTAATACTAGTTTC---TGAATC-------AAACTGCAATTATCAGTGACTTAACACAATTT-GTTTTTTCTTCTCATTCATATCACAGTTCATTAGAGGAT-T-AACTTTCTGAAATTCCTTAAAAGTTttcactaaa---ttctctgcatttagtataaagagg-----agtatgagaagcatcgcatgaggtatct---tatagctcggtctaaaagtggcaaatataacttctacctacatttcattcacaagtgaaatggtctcatcctacctgcaattgaggctgaaaaatgcagcatttccgtatggtctgaa-gaaggaaataat---gttatcatctcaccaatctctgtcaAGgtcagtccttctgatgccaaagcatccactttaatattcctcccattgtaaaacacaccgacttctcctctcaaaatgaaaaaatgcagagttctt--tcaaggtctggcatccagctgaaaatttagtatctctggccactcataattctccctgtgaagtccagacaaggtcctcatttctcagtaaaatctaaacttaaaagactaaatatgtgtcctgtgt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5973326 1097 + 8656713 AACCACTGGGCAGTAAGAG-ACG-GTAACACATCACAGCAGATATTGTTTCCTTAG-GCAATTGAATTACATCAG-AAAAACTAAGCTGAGAGAt----aacaaaacaatttcaaaatgtcaggagact-aaatcaattc--attcat--aagttactcatttcacatgtccat--ggtgttgcttatgactct-actcataggtcactgtcacctttat---accaggatctagg-ggacaaagcagccactccagaaca-tgaaagtcactgtagtcaaag-aaaaaagaatgt--tgtgaggcacactctgaaattttgcctctagaaggaaacagacactttag-tctactaacatttcaataagcaaaaggaaatcacatgctataagtgaattcagcagggcagtgagctatatcctaccatgtgtatgaagaacccaaaaaatac--------gta----------agcaatcctaatgtttatcacCTTATATTTATCTGTGCATGCTATTGTGGTCACTTTCACTGTAAAAGTAGTCATTGCAGAATCATCACTAGGATCTCACT----GTATT----AGAGTAATTAATACTAGTTTC---TGAATc-------aaactgcaagtatcagtgacttaacacaattt-gttttttcttctcattcatatcacagttcagtAGAGGAT-T-AACTTTCTGAAATTccttaaaggttttcaccgaa---tcctctggatttagtataaagagg-----agtatgagaagcatcacatgaggtatct---tatagctcagtctaaaagtagcaaatataacttctacctacatttcattcacaagtgaaatggtctcatcctacctgcaattgaggctgaaaaatgcagcatttccatatgGTGTAAA-GAAGGAAATAAT---GTTATCATCTCACCAATCTCTGTCAAGgtcagtccttctgatgccaaagtatctgctttaatattcctcccattataaaacacgccaactt---ctctcaaaatg-aaaaatgcagagttctt--tcaaggtctggcatccagctgaaaatttagtatctctggccactcataattctcctaatgaagtccagatagggtcctcatttctcagtaaaatctaaacttaaaagactaaatatgtgtcctgtgt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129402304 1099 - 190850796 AATCATTGGCCAGTAATAG-ACA-TTAACACCTCACAGCAGATACTATTTCCTTGTAGTAACTGAACTACATCAG--AAAACCAAGGTGAgcaa-----aaaaaaacaatctctaaaggtcagtagtctaaaatcaattc--attcatacaaattcctcatttcacctgtccat--ggtgttgcttatgagtct-actcctgggtccttgtcacctttat---actgtgatctagg-gg-caaagcagccactcctgaacgttgaaagttactgtagtcaagg-aaaagagaatgt--ttttaggcacactctgaattttcacctctagaaagaaatagacactttag-tctactaacatttcaataagccaaaggaaatcacattctataattgagttcaacagggcagtgagctatatcctaccatgtgtatgacgaagccaaaaaaaaa------atgta----------agcaatcctaatggttatcacCTTATATGTATCCATACATATTATTATGGTTGCTTTCACTGTAAAAGTAGTCACTGCAGAATCAT-CCTAGGATCTCACT----ATA----TCAGGATAATTAATATTAGTTTC---TGAATC-------AAACTGCAAATATCAGTGAC--AACACAATTATTTTTTTCTTTCTCATTCATATCATAGTTCAAT-GAAGAT-T-AACTTTCTGAAATTCCGTAAAGGTTttcactgaa---tcctctgcatttagtgtaaagagg-----agtatgagaaacattgcctgaggtatca---tatagctcagtccaaaagtggcaaatataacttctgcctacatatcatttaccagttaaatagtttcatcctaactgcatttgaggctgaaaaatacagcatttctgtatggtccaaa--aaggaaataat---gtcatcatctcaccaatctctgtcaAGGCCAgtccttctgatgccaaagtatctgccttaatcttcttcctattataaaacacactgacttctcttctc-aaatg-aaaaatgtagagttctt--tcaaggtctggcatccaactcaaaatttagtatctctggccactcataattctcccaatgaagtccagattatgtcttcactgcttagtaaaatctaaacttaaaagactaaatatgcatcctgtgt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6485756 1103 - 25294431 AACCATTGGCCAGTAATAG-ATA-TTAACACATCACAGCAGATATTATTTCCTTGTAGTAACTGAATTACATCAG--AAAACTAAACTGAGCGA-----AACAaaacaatctctaaaggtcagtagtctaaaatcaattc--attcatataaattcctcatttcacctgtccat--ggtgttgcttatgactct-actcctgggtcattgtcacctttat---accatgatctagg-gg-caaagtagccactcctgaacattgaaagttactgtagtcaagg-aaaagagaatgt--tgtgaggcacactctgaattttcacctctaaatagaaatagacactt------tactaacatttcaataagctgaaggaaatcacattctataaatgagttcaacagggcagtgagctatatcctaccatgtgtatgatgaggccaaaaaacaa--aaatatgta----------agcaatcctaatgtttatcaACTTATATGTATCCACACGTATTATTATGTTCACTTTCACTGTAAAAGTAGTCATTGCGGAATCATCCCCAGGATCTCATT----ATATTAGTCAGGGTAATTAATATTAGTCTC---TGAATC-------AAACTGCAAATATCAGTGAC--AACACCATTA-TTTTTTCTTTCTCATGCATATCATAGTTCAGTAGAAGAT-T-AACTTTCTGAAATTCCATAAAGGTTttcactgaa---tcctctgcatttagtataaagagg-----agtatgagaagcattgcctgaggtatat---tatagctcagtctaaaagtggcaaatatgacttctacctacatatcatttaccagttaaatagtttcatcctaactgcaattgaggctaaaaaatacagcatttccgtatggtccaaa--aaggaaataat---atcatcatctcaccaatctctgtcaAGGCCAgtccttctgatgccaaagtatctgccttaatcttcttcctattataaaacacaccgacttctcttctc-aaatg-aaaaatgtagagttctt--tcaaggtctggtatccagctcaaaatttagtatctctggccactcataattcacccagtgaagttcagattatgtcttcatttctcagtaaaatcgaaacttaaaagaataaatacgcatcctgtgt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4042338 1086 - 6311556 AACCATTGGCCAGTAATAG-ATA-TTAACACATCACAGCAGATACCATTTCCTTGCAGTAGCTGAATTACATCAG--AAAACTAAGCTGAGCGA-----AACAaaacaatctctaaaggccagtagtctaaaatcaattc--atttatataaattcctcatttcacctgtccat--agtgttgcttatgactct-tctcctgggtcattgtcacctttat---accgtgatctagg-gg-caaagcagccactcctgaacattgaaagt--------tcaagg-aaaagagaatgt--tgtgaggcacactctgaattttcacctctagaaagaaatagacactt------tactaacatttcaataagccaaaggaaatcacattctataactgagttcaacagggcagtgagctatatcctaccatgtgtatgatgaagccaaaaaaaat------atgta----------agcaatcctaatgtttatcacCTTATATGTATCCACACATATTATTATGGTCACTTTCACTGTAAAAGTAGTCATTGCAGAATCATCCCTAGGATCTCACT----ATATTAGTCAGGGTAATTAATATTACTTTC---TGAATC-------AAACTGCGAATATCAGTGAC--AACACAATTATTTTTTTCTTTCTCATTCATATCATAGCTTAGTAGAAGAT-T-AACTTTCTGAAATTCCATAAAGGTTTTCACTGAA---TCCCTTGCATTTAGTAT--agagg-----attatgagaagcattgcctgaggtattt---tatagctcagtctaaaagtggcatatttaacttctacctacatatcatttaccagttaaatagtttcatcctaactgcaattgaggctgaaaaatagagcatttctgtatggtccaaa--aaggaaatcat---gtcatcatctcaccaatctctttcaAGGCCAATccttctgatgccaaagtatctgccttaa---tcttcccattataaaacacaccgacttctcttctc-aaatg-aaaaacgtagagttctt--tcaa-gtctggcatccagctcaaaatatagtatctctggccactcacaattctcccaatgaagtttagattatgtcttcatttctcagtaaaatctaaacttaaaagactaaatatgcatcctgtgt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14897328 1106 + 15034901 AACCATTGGCCAGTAATAG-ACA-TTCACACATCACAGCAGATACTGTTTCCTTGTAGTAACTGAATTACATCAG--AAAACTAAGCTGAGCGA-----AACAaaacaatctctaaatatcagtagtctaaaatcaattc--attcatataaatttctcatttcacctatcgat--ggtgttgcttatgactct-actcctgggtcattgtcacctttat---actgtgatctagg-gg-caaagcagccactcctgaacattgaatgttactgtagtcaagg-aaaagagactg---tgtgaggcacactctgaattttcacctctagaaa-aaataaacactttag-tctactaacatttcaataagccaaaggaaatcacattctataactgagttcaacagggcagtgagctatattctaccatgtgTATGATGAAACCaaaaaaaaaaaaaaaaaGTA----------AGCAATCCTAATGTTTATCACCTTATATGTATCCATACATATTATTATGGTCACTTTCACTGTAAAAGTAGTCATTGCAGAATCATCCCCAGGATCTCACt----atattagtcagggtaattaatattagtttc---tgaatc-------aaacagcaaatatcagtgacttaacacaatta-ttttttctttctccttcatatcatagttcagtAGAAGAT-T-AACTTTCTGAAATTCCATAAAGGTTttcactgca---tcctctgcatttagtgtaaagagg-----agtatgagaagcattgcctgaggtatct---tatagctcagtctaaaagtggcaaatataacttctacctacatatcatttaccagttaaatagcctcatcctaactgcagttgaggctgaaaaatac----tttccatgtggtccaaa--aaggaaataat---gtcatcatctcaccaatctctgtcaAGGCCAgttcttctgatgccaaagtatctgccttaatcttcttcctattataaaacacgccgacttctcttctc-aaatg-aaaaatgtagagttctt--tcaaggtctggcatccaactcaaaatttagtatctctggccactcataattctcccaatgaagtccagattatgtcttcatttctcagtaaaatctacacttaaaagactaaatatgcatcctgtgt i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 925919 1097 - 3201129 CAGCTCTGG-CAGCGAGAA-ACACATAACATATCAGAACAAATACTATCGCTTTATAGCAGTACAGGTATTTCAG-GAAAACTAAGCTGAGTGATTAAAAaaaaaaaaaactttaaatatcaatgg-ct-gaatcaactc--atttct--atcttattcatttcacatatccat--cgtgttgcttagggctctaattcgcgggtaattgtcacccttat---aaagggatccaga-ggacagaaaagccacaccataacttcaaaaattgctacaatcaaggaaaaagaaaatgc--tgtgtggcgccctctggatctctgcct-tagaaggcaacagacacgtcag-tgtacttacctctcagtgc-ccataggaaaccacatgctatgtctgagttcaaCAAAG-AGTGAGGGGTGTCCTGCTCTATGTATGGACAAG---AAAAATAT--------GCATATATATTAGAACAATCCTAAAGTTTAGCACCTTACATGTATCTAGTTAAGCTATTAGTGCCACTTTTACTATAAAAATAGTCAATGCAAAATCATCACTGAGCTCTTACTGCACATATTAATCAGGGTTATTAATATCAGTTTCAAATCACAC-------AAACTGCAAGTATCAATGGTATAATGCATTT---TTTGTCATTTTTATCCATCTCATGGTCCAATGGAGGAT-Tccgtttcctggaattcctcagaggcttccactggc---tcctctgcattcagtaaagaggag-----agtgtgagaaagatcccatggtgcatctaccctcagctccgtcttaaag-ggcaaacgtaactttcacctacactgaatttgccaggcagatggtctcatcctacctgcaattaaggctggaaaat--agtatttctatagggtccaaa--aaagaaataaa---aTCATCATTTTAATGGACTCCGTCAAAgtccattcttctggggccaaaatatctgctttgatcttcctgccattat---atacactggcctctcttctcagaagg-agaaatacagagttttt--tcaaggtctggcatccagctcaaaattcattatctctggtctcgcataattttcccaatcaagt--------------------tcagTAAAATCTAAATTCAGTAGACTAAGTATTTTTCATATGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44020027 1107 - 53741614 TACCAGTAGCCAGTAGTAATAAT-GTAACATATCAGAGCAAAGAATATTTCCTTATAGCAGCGAAATTATATCAGAAAAAAATAGGCAAAGTGAt----aacaaga-aacctttaattatcagtggctt-gaatcaactcagattttt--ataacactcattttatatatccatcatgtgttgctttggactct-gctcatggatcattgtcatccttatcacaccaggatccagacagacaaattagctattctaaaacattggaagttgctacagtcaagaaaaaagaggctgttatgtgtgccatactctggatcctcatttctagaaaggactacatacttcggttctgttcacatttcaatggcca-----aagtcacatgatatacctgagctcagcagggcagggaggCATCTTCC--------TAAGGGCAGGCAAAAAAAATT--------GTA----------ATCAACTCTAAAGTTTCTAATCTTATTCTTATCACTGC----TGTTGTGGTCACCTTCTCTGTAAAAATAGTCATTGCAAAAT--TCACTAAGGTCTTACT----ATACTAGTGAAGGTAATTAATGCTAGTTCC---TGGATCAGAAAATAAAGTATAAATCTTGGCGGCTTCACA-------ATTTATTATTCTCATTCATATCATAGTTCAATGGAAAATCT-CATTCTCTGAAATTTCTTAGGGGCTTCCACTAGAATTTACTTTGAATTCAATAAAAAGAAGAAAGCAGTGTGGAAAGGAT-ATATAGGACATTT---CAGAGCCCAG-ATCAAAGTATAAAACATGACTTCCATCTACATCTTCTTGAACTGGTAAGTGGTTACAATCTATCTGCAGTTAA-ATTGGGAAATACA--ATGTCTATAGGGTCCAGATGAGGAAAATAATATGGTTATTCTCTAATCAGTCTTTGGGAAAGTTATcc---ctgatggcaaaatatctgctttattctttctcccatccaaacacacactgacttctcttcacaataga-aacaacacagaactctccatataactctttggcccaacttaaaattcagtacctatagtcattcacagtcctggcaatcaagtccagagaaggtcctcatttttcagt-aaatctgaactcagagtactgaatatttgtcatatat i canFam3.chr19 C 0 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26303114 1413 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1706261 552 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=1223009.000000 s hg38.chr9_KI270719v1_random 26273 128 + 176845 acaaatatgcaatggtgaagtgggaacaaggtggcagcaataaatacATCTCTATCACCACAGTCATTTGTTCTTGACTATTTGCAAATC-ATTTCAGGAAGACATGGTGAAACATCCTACACTGTG--AG s panTro5.chr4 135051044 128 + 194502333 acaaatatgcaacggtgaagtgggaacaaggtggcagcaataaaTATATCTCTATCACCACAGTCATTTGTTCTTGACTATTTGCAAATC-ATTTCAGGAAGACATGGTGAAACATCCTACACTGTG--AG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 31604 128 - 70559 acaaatatgcaacggtgaagtgggaacaaggtggcagcaataaatacATCTCTATCACCACAGTCATTTGTTCTTGACTATTTGCAAATC-ATTTCAGGAAGACATGGTGAAACATCCTACACTGTG--AG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445186 128 - 115148730 acaaatatgcaatggtgaagtgggaacaaggtggcagcaataaatacATCTCTATCACCACAGTCATTTGTTCTTGACTATTTGCAAATC-ATTTCAGGAAGACATGGTGAAACATCCTACACTGTG--AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387243 128 + 190429646 accaatatgcaatggtgaagtgggaacaaggtggcagcaataaatacatctctatcaccacagtcatttgttcttgactatttgcaaatg-atttcaggaagacatggtgaagcatccttcactgtg--ag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906237 128 + 189454096 accaatatgcaatggcgaagtgggaacaaggtggcagcaataaatacatctctatcaccacagtcatttgttcttgactatttgcaaatg-atttcaggaagacatggtgaagcatccttcactgtg--ag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34897563 128 - 40319822 accaatatgcaatggcgaagtgggaacaaggtggcagcaataaatacatctctatcaccacagtcatttgttcttgactatttgcaaatg-atttcaggaagacatggtgaagcatccttcactgtg--ag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4451353 128 - 9219162 acaaatatgcaatggtgaagtgggaacaaggtggcagcaataagtacatctctatcaccacagtcatttgttcttgactatttgcaaatg-atttcaggaagacatggtgaagcatccttcactgtg--ag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78976851 128 + 135778131 ccaaatattcaatggtgaagtgggaacaaggtgacagcaataaatacatctctatcaccacagtcatttgttcttgactatttgcaaatg-atttcaggaagacatggtgaagcatccttcactgtg--ag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743213 128 - 3013352 acaaatatgcaatggtgaagtgggaacaaggtggcagcaataaatacatctctatcaccacagtcatttgttcttgactatttgcaaatg-atttcaggaagacatggtgaagcatccttcactgtg--ag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5974423 128 + 8656713 acaaatatgcaatggtgaagtgggaacaaggtggcagcaataaatacatctctatcaccacagtcatttgttcttgactatttgcaaatg-atttcaggaagacatggtgaaacatccttcactgta--ag i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129403403 122 - 190850796 ataaatatgcaatggtgaaatgggaacaaggtggcagcaataaatatttctctatcaccacagtcatttgttc----ctatttgcaaatc-atttcagaaagacatgatgaaacatcctacactgag---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6486859 115 - 25294431 acaaatatgcaatggtgaaatgggagcaaggtggcagcaataaatatttcTCTATCA-------TATGATTTT----CTATTTGCAAATC-ATTTGAGGAAGACATGGTGAAACATCCTACACCGAG---- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4043424 124 - 6311556 acaaatatgcaatggtgaaacgggagcaaggtggcagcaataaatatttctctatcaccacagtcatttgttc----ctatttgcaaatc-atttcaagaagacatggtgaaacatcctacaccgacag-- i cebCap1.NW_016107420v1 C 0 I 48 s aotNan1.NW_018507635v1 14898434 120 + 15034901 acaaatatgcaatggtgaaatgggaacaaggtggcagcaataaatatttctctatcac--cagtcattttttc----ctatttgcaaatc-atttccggaagacatagtgaaatatcctacaccgag---- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927016 126 - 3201129 ACAAATACACAGTGGTAGAATAGGAAC-AGGCAGCAGCAGGAAGTATTTGTCTACCATCACGTTCATTTTCTCTTAACTATTTGCAGATC--TTTTGTCAagatgttgtgaaccatcttcccctgga--ag i otoGar3.GL873702 C 0 I 38 s canFam3.chr19 44021134 117 - 53741614 acaaaaatgcaatggt------------agcagacagTAAGGAAGATTTTTATATCATCACACTCACTTGTTTTTGACTATTTGCACATATTTTTtaggaagacactgtaaagcactatgacctaag--gg i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1706813 116 + 5974691 ACAAATATAAAATAGTCAAATTAGAACAAAGTTACAGCAATAAATATTCCTATATCAT------------TCCTTAAATATTTGGCAATA-TATTTTGGAAGACATTGTAGAACTCCCAAAATTGGG--AG i dasNov3.JH569232 I 552 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26303114 1413 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=69853.000000 s hg38.chr9_KI270719v1_random 26401 7 + 176845 TGGCAGA s panTro5.chr4 135051172 7 + 194502333 TGGCAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 31732 7 - 70559 TGGCAGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445314 7 - 115148730 CGGCAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387371 7 + 190429646 tggcaga i rheMac8.chr5 C 0 I 47 s macFas5.chr5 130906365 7 + 189454096 tggcaga i macFas5.chr5 C 0 I 47 s macNem1.NW_012010911v1 34897691 7 - 40319822 tggcaga i macNem1.NW_012010911v1 C 0 I 47 s cerAty1.NW_012000798v1 4451481 7 - 9219162 tggcaga i cerAty1.NW_012000798v1 C 0 I 47 s chlSab2.chr7 78976979 7 + 135778131 tggcaga i chlSab2.chr7 C 0 I 47 s manLeu1.NW_012103277v1 2743341 7 - 3013352 tggcaga i manLeu1.NW_012103277v1 C 0 I 47 s colAng1.NW_012114544v1 5974551 7 + 8656713 tggcaga i colAng1.NW_012114544v1 C 0 I 47 s calJac3.chr3 129403525 7 - 190850796 tgacaga i calJac3.chr3 C 0 I 47 s saiBol1.JH378129 6486974 7 - 25294431 TGACAGA i saiBol1.JH378129 C 0 I 61 s aotNan1.NW_018507635v1 14898554 7 + 15034901 tgacaga i aotNan1.NW_018507635v1 C 0 I 47 s otoGar3.GL873702 927180 7 - 3201129 tgagaga i otoGar3.GL873702 I 38 I 9 s canFam3.chr19 44021251 7 - 53741614 taagaaa i canFam3.chr19 C 0 I 41 s dasNov3.JH569232 1706929 7 + 5974691 TGACAGA i dasNov3.JH569232 C 0 I 44 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26303114 1413 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I e cebCap1.NW_016107420v1 4043548 48 - 6311556 I a score=476147.000000 s hg38.chr9_KI270719v1_random 26408 47 + 176845 ACCCCATGTGCACTGCAATCTCATTTCCTACCCTCCAGAG-GAGTATA s panTro5.chr4 135051179 47 + 194502333 ACCCCATGTGCACTGCAATCTCATTTCCTACCCTCCAGAG-GAGTATA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 31739 47 - 70559 ACCCCATGTGCACTGCAATCTCATTTCCTACCCTCCGGAG-GAGTATA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445321 47 - 115148730 ACCCCATGTGCACTGCAGTCTCATTTCCTACCCTCCGGAG-GAGTATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387425 47 + 190429646 atcccatgtgcactgcaatctcatttcctacactctggag-gAGTACA i rheMac8.chr5 I 47 C 0 s macFas5.chr5 130906419 47 + 189454096 atcccatgtgcactgcaatctcatttcctacactctggAG-GAGTACA i macFas5.chr5 I 47 C 0 s macNem1.NW_012010911v1 34897745 47 - 40319822 atccCATGTGCACTGCAATCTAATTTCCTACACTCTGGAG-GAGTACA i macNem1.NW_012010911v1 I 47 C 0 s cerAty1.NW_012000798v1 4451535 47 - 9219162 atcccatgtgcactgcaatctcatttcctaccctctggag-gAGTACA i cerAty1.NW_012000798v1 I 47 C 0 s chlSab2.chr7 78977033 47 + 135778131 atcccatgtgcactacaatctcatttcttaccctctggAG-GAGTGCA i chlSab2.chr7 I 47 C 0 s manLeu1.NW_012103277v1 2743395 47 - 3013352 atcccatgtgcactgcaatctcatttcctaccctctggag-aagtACA i manLeu1.NW_012103277v1 I 47 C 0 s colAng1.NW_012114544v1 5974605 47 + 8656713 atcccatgtgcactgcaatctcatttcctaccctctggag-gAGTACA i colAng1.NW_012114544v1 I 47 C 0 s calJac3.chr3 129403579 47 - 190850796 atcccatgtgcactatagtctcatttcctaccctccggaa-gAGTGTA i calJac3.chr3 I 47 C 0 s saiBol1.JH378129 6487042 47 - 25294431 ATCCCATGTGCACTGTCGTCTCATTTCCTGCCCTCCAGAA-GAATGTA i saiBol1.JH378129 I 61 C 0 s cebCap1.NW_016107420v1 4043596 47 - 6311556 atcccatgtgcactatcatctcatttcctaccctgtggaa-gAGTGTA i cebCap1.NW_016107420v1 I 48 C 0 s aotNan1.NW_018507635v1 14898608 47 + 15034901 atccCATGTGTACTATAGTCTCATTTCCTACCCACCAGAA-GAGTGTA i aotNan1.NW_018507635v1 I 47 C 0 s otoGar3.GL873702 927196 48 - 3201129 atcttgtgtgtaccgcgatcacatttcccaccctctggAGAAAGTATA i otoGar3.GL873702 I 9 C 0 s canFam3.chr19 44021299 46 - 53741614 atcTCATGTGT-CTGGTATCTCTTTTCCTACCCTCTACAA-TAACATA i canFam3.chr19 I 41 C 0 s dasNov3.JH569232 1706980 46 + 5974691 ATCCTATGTGCTCTGTGGTTATTTTTTCAATCCTCTGGA--GAATATA i dasNov3.JH569232 I 44 C 0 e panPan2.chrUn_NW_014014795v1 2795 6167 + 11745 M e micMur3.chr14 26303114 1413 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=668300.000000 s hg38.chr9_KI270719v1_random 26455 80 + 176845 TAAACTTTTCCTACATAAATAATGGCCACATTTTTGTATCGATACAT-TGTAAGTTCTAAGATG-TGTG----------------------------TGTTTTTTTTAAG---------- s panTro5.chr4 135051226 75 + 194502333 TAAACTTTTCCTACATAAATAATGGCCACATTTTTGTATCGATACAT-TGTAAGTTCTAAGATG-TGT---------------------------------TTTTTTAAG---------- i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 8962 74 + 11745 TAAACTTTTCCTACATAAATAATGGCCACATTTTTGTATCGATACAT-TGTAAGTTCTAAGATG-TG----------------------------------TTTTTTAAG---------- i panPan2.chrUn_NW_014014795v1 M 6167 C 0 s gorGor5.CYUI01001450v1 31786 79 - 70559 TAAACTTTTCCTACATAAATAATGGCCACATTTTTGTATCGATACAT-TGTAAGTTCTAAGATG-TGTG----------------------------TGT-TTTTTTAAG---------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445368 76 - 115148730 TACACTTTTCCTACATAAATAATGGCCACATTTTTGTATCGATACAT-TGTAAGTTCTAAGATG-TGTA--------------------------------TTTTTTAAG---------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387472 82 + 190429646 TAAACTTTTCCTACATAAATAATGGCCACATTTTTGTATTGATACAT-TGTAAGTTCTAAGACG-TGTA--------------------------TTTTTTTTTTTAAAG---------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906466 83 + 189454096 TAAACTTTTCCTACATAAATAATGGCCACATTTTTGTATTGATACAT-TGTAAGTTCTAAGACG-TGTAT-------------------------TTTTTTTTTTTTAAG---------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34897792 83 - 40319822 TAAACTTTTCCTACATAAATAATGGCCACATTTTTGTATTGATACAT-TGTAAGTTCTAAGACG-TGTAT-------------------------TTTTTTTTTTTAAAG---------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4451582 83 - 9219162 TAAACTTTTCCTACATAAAGAATGGCCACATTTTTGTATTGATACAT-TGTAAGTTCTAAGACG-TGTAT-------------------------TTTTTTTTTTTTAAG---------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977080 80 + 135778131 TAAATTTTTCCTACATGAATAATGGCCACATTTTTGTATTGATACAT-TATAAGTTCTAAGACA-TGTA----------------------------TTTTTTTTAAAAG---------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743442 82 - 3013352 TAAACTTTTCCTACATAAATAATGGCCACATTTTTGTATTGATACAT-TGTAAGTTCTAAGACG-TGTA--------------------------TTTTTTTTTTTAAAG---------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5974652 82 + 8656713 TCAACTTTTCCTACATAAATAATGGCCACATTTTTGTATTGATACAT-GGTAAGTTCTAAGACG-TGTA--------------------------TTTTTTTTTTTAAAG---------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129403626 108 - 190850796 TAAACTTTTCCTACATAAACAGTGGCCACATTTTTGTATCAATATAT-TGTAAGTTCTAAGgtg-tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTAAAAAG---------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487089 83 - 25294431 TAAACTTTTCCTGAGTAAATAATGCCCACATTTTTGTATCAATATAT-TGTAAGTTCTAAGATG-TGTAT-------------------------TTTTTTTAAAAAAAG---------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4043643 95 - 6311556 TAAA-TTTTCCTACATAAATAATGGCCACATTTTTGTATCAACATAT-TGTAAACTCTAAGAta-tgtgt------------gtgtgtatgtgtgtgtgtgtTTAAAAAG---------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14898655 84 + 15034901 TAAACTTTTCCTGAGTAAATAATGGCCACATTTTTGTATCAATATAT-TGTAAGTTCTAAGATG-TGTAT------------------------TTTTTTTAAAAAAAAG---------- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927244 70 - 3201129 TACAGTTTTCTTATATAAATATTGGCCAAATTTTTGTATTAAGA------GAAGTTCCAAATTT-CATG--------------------------------TATTAAAA----------- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44021345 76 - 53741614 TAGACTTCTCTCATATAAGTTTTG-CTACA-TTTGGTATTAATACATAGGTAAGTTCTAGGATACTATA--------------------------------TTTTTAAAG---------- i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1707026 82 + 5974691 TGAATTTTTCTT-TGTAAGTAAGA-----AATTTTGTATTGAGTCATATATAAATTCTATGACA-CTGGC-------------------------------TATTAAAAAACAAAAACAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26303114 1413 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 200548 9055 - 1108378 I a score=24274.000000 s hg38.chr9_KI270719v1_random 26535 2 + 176845 AA s panTro5.chr4 135051301 2 + 194502333 AG i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9036 2 + 11745 AG i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 31865 2 - 70559 AG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445444 2 - 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387554 2 + 190429646 AG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906549 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34897875 2 - 40319822 AG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4451665 2 - 9219162 AG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977160 2 + 135778131 AG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743524 2 - 3013352 AG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5974734 2 + 8656713 AG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129403734 2 - 190850796 AG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487172 2 - 25294431 AA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4043738 2 - 6311556 AG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14898739 2 + 15034901 AG i aotNan1.NW_018507635v1 C 0 C 0 s tarSyr2.KE944182v1 209603 2 - 1108378 AT i tarSyr2.KE944182v1 I 9055 I 36523 s otoGar3.GL873702 927314 2 - 3201129 AG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44021422 2 - 53741614 AA i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1707108 2 + 5974691 AA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26303114 1413 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I a score=330095.000000 s hg38.chr9_KI270719v1_random 26537 28 + 176845 GAATTAAAATAGAA-AAGCATATACCTAA s panTro5.chr4 135051303 28 + 194502333 GAATTAAAATAGAA-AAGCATATACATAA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9038 28 + 11745 GAATTAAAATAGAA-AAGCATATACCTAA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 31867 28 - 70559 GAATTAAAATAGAA-AAGCATATACCTAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445446 28 - 115148730 GAATTAAAATACAA-AAGCATATACCTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387556 28 + 190429646 GAATTAAAATAGAA-AAGCATATATCTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906551 28 + 189454096 GAATTAAAATAGAA-AAGCATATATCTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34897877 28 - 40319822 GAATTAAAATAGAA-AAGCATATATCTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4451667 28 - 9219162 GAATTAAAATAGAA-AAGCATATATCTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977162 28 + 135778131 GAATTAAAATAGAA-AAGCATACACCTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743526 28 - 3013352 GAATTAAAATAGAA-AAGCATATATCTAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5974736 28 + 8656713 GAATTAAAATAGAA-AAGCATATACCTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129403736 28 - 190850796 GAATTAAAATAGAA-AAGCGTATACCTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487174 28 - 25294431 GAATTAAAATAGAA-GAGCATATACCTAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4043740 28 - 6311556 GAATTAAAATAGAA-AAGCATATACCTAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14898741 28 + 15034901 GAATTAAAATAGAA-AAGCATATACCTAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927316 28 - 3201129 GCATTAGAATGAAA-AAAAATTCACTTGA i otoGar3.GL873702 C 0 I 9 s canFam3.chr19 44021424 28 - 53741614 GAAGTGAGAGTAGA-AAACATTTACTAAG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1707110 29 + 5974691 GAATTAGAGCAGAAGAAATATTTATTGGG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26303114 1413 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=686968.000000 s hg38.chr9_KI270719v1_random 26565 50 + 176845 AAGATGTTCCTCGGGATATATCTGCATATATTCTCTACTCTTGTCATTTT s panTro5.chr4 135051331 50 + 194502333 AAGATGTTCCTCGGGATATATCTGCATATATTCTCTACTCTTGTCATTTT i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9066 50 + 11745 AAGATGTTCCTCGGGATATATCTGCATATATTCTCGACTCTTGTCATTTT i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 31895 50 - 70559 AAGATGTTCCTCGGGATATATCTGCATATATTCTCTACTCTTGTCATTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445474 50 - 115148730 AAGATGTTCCTCGGGATATATCTGTATATATTCTCTACTCTTGTCACTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387584 50 + 190429646 AAGATGTTCCTCAGGATATATCTGCATATATTTTCTACTCTTGTCATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906579 50 + 189454096 AAGATGTTCCTCAGGATATATCTGCATATATTTTCTACTCTTGTCATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34897905 50 - 40319822 AAGATGTTCCTCAGGATATATCTGCATATATTTTCTACTCTTGTCATTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4451695 50 - 9219162 AAGATGTTCTTCAGGATATATCTGCATATATTTTCTACTCTTGTCATTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977190 50 + 135778131 AAGATGTTCCTCAGGATATATCTGCATATATTTTCTACTCTTGTCATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743554 50 - 3013352 AAGATGTTCCTCAGGATATATCTGCATATATTTTCTACTCTTGTCATTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5974764 50 + 8656713 AAGATGTTCCTCAGGATATATCTACATATATTTTCTACTCTTGTCATTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129403764 50 - 190850796 AAGATGTTTCTCAGAATATATCTGCATATATTCTCTACTTTTGCCATTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487202 50 - 25294431 AAGATGTTCCTCAGAATATATCTGCATATATTCTCTACTCTTTCCAGGTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4043768 50 - 6311556 AAGATGTTCCTCAGAATATATCTGCATATATTCTCTACTCTTGCCATGTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14898769 50 + 15034901 AAGATGTTCCTCAGAATATATCTGCATATATTCTCTACTCTTGCCATGTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26304527 50 - 93316391 AAGGTGTTCCTCAGGATATACTTGCATATATCCTCTAGTCTTGTCATTTT i micMur3.chr14 I 1413 I 710 s otoGar3.GL873702 927353 50 - 3201129 AAAGTGTTCCTCAAGATACCCTTACGTATATCCTCTAGTCCTGTCGTATT i otoGar3.GL873702 I 9 I 1 s canFam3.chr19 44021452 50 - 53741614 AAGATGTTCCACAGAGTATGCCTGTATATACCTTCTGATTCTATCATTTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1707139 49 + 5974691 AAAGTGTTCCACACAGTATGCTTATATATTATCTTTAGTCCT-Tcatttt i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=46683.000000 s hg38.chr9_KI270719v1_random 26615 3 + 176845 AAA s panTro5.chr4 135051381 3 + 194502333 AAA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9116 3 + 11745 AAA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 31945 3 - 70559 AAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445524 3 - 115148730 AAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387634 3 + 190429646 AAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906629 3 + 189454096 AAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34897955 3 - 40319822 AAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4451745 3 - 9219162 AAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977240 3 + 135778131 AAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743604 3 - 3013352 AAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5974814 3 + 8656713 AAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129403814 3 - 190850796 AAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487252 3 - 25294431 AAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4043818 3 - 6311556 AAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14898819 3 + 15034901 AAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927404 3 - 3201129 AAA i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44021502 3 - 53741614 AAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1707188 3 + 5974691 aaa i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=692267.000000 s hg38.chr9_KI270719v1_random 26618 68 + 176845 T-AAAAATAcagtggtcccttgatatcctcaagagattgggtccaggaccccagaggataccaaaatca s panTro5.chr4 135051384 68 + 194502333 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggcccccagaggataccaaaatca i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9119 68 + 11745 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggcccccagaggataccaaaatca i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 31948 68 - 70559 T-AAAAATAcagtggtcccttgatatcctcaagagattgggtccaggaccccagaggataccaaaatca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445527 68 - 115148730 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggaccccagaggataccaaaatca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387637 68 + 190429646 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggactccagaggataccaaaatca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906632 68 + 189454096 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggactccagaggataccaaaatca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34897958 68 - 40319822 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggactccagaggataccaaaatca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4451748 68 - 9219162 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggactccagaggataccaaaatca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977243 68 + 135778131 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggaccccagaggataccaaaatca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743607 68 - 3013352 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggactccagaggataccaaaatca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5974817 68 + 8656713 T-AAAAATAcagtggtcccttgatatcctcaagagattggttccaggacccaagaggataccaaaatca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129403817 51 - 190850796 G-AAAAATACAGTGGTCCC----------------attggtcccaggac-ccagaggataccaaaatca i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487255 67 - 25294431 G-AAAAATAcagtggtcccttgatatcctcaagggattggttccaggac-ccagaggacaccaaaatca i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4043821 67 - 6311556 G-AAAAATGcagtggtcccttgatatcctcaagagattggttccaggac-ccagaggacaccaaaatca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14898822 68 + 15034901 GAAAAAATAcagtggtcccttgatatcctcaagggattggttcaaggac-ccagaggacaccaaaatca i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927407 68 - 3201129 T-AAAAATTcagttgtccctcagtatccacagggcattggttccaagacctccaaggacaccaaaatct i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1707191 16 + 5974691 ----------------------------------------------------ataaaacact-aaatca i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44021505 0 - 53741614 C a score=1289092.000000 s hg38.chr9_KI270719v1_random 26686 143 + 176845 gcacatattca--------agtaatcctgtggaaccagagtatac-----------------aaaaagtcagtcctccatatctgcgggtttttcatcctgtggctactgta-ttttgatccacatttcaatgcagatgctga----------------------ttttttttaatt--aaaagaatctctat s panTro5.chr4 135051452 139 + 194502333 gcacatattca--------agtaatcctgtggaaccagagtatac-----------------aaaaagtcagtcctccatatctgcgggtttttcatcccgtggatactgta-ttttgatccacatttcaatgcagatgctga----------------------ttttttttaatt--aaaaaaat----at i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9187 139 + 11745 gcacatattca--------agtaatcccgtggaaccagagtatac-----------------aaaaagtcagtcctccatatctgcgggtttttcatcccgtggatactgta-ttttgatccacatttcaatgcagatgctga----------------------ttttttttaatt--aaaaaaat----at i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 32016 142 - 70559 gcacatattca--------agtaatcctgtggaaccagagtatac-----------------aaaaagtcagtcctccatatctgcgggtttttcatcctgtggctactgta-ttttgatccacatttcaatgcagatgctga-----------------------tttttttaatt--aaaagaatctctat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445595 140 - 115148730 gcacatattca--------agtaatcctgtggaaccagagtatac-----------------agaaagtcagtcctccgtatctgagggtttttcatcccgtggatactgta-ttttgatccacatttcaatgcagataatga------------------------ttttttaatt--aaaa-aatctctat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387705 142 + 190429646 gcacatattca--------agtaaccttgtggaaccagagtatac-----------------aaaaagtcagtcctccatatctgcaggtttttcatcctgtgaatactgta-ttttgatccacatttcaatgcagatgcaga-----------------------tttttttaatt--aaaaacatttctat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906700 142 + 189454096 gcacatattca--------agtaaccttgtggaaccagagtatac-----------------aaaaagtcagtcctccatatctgcgggtttttcatcctgtgagtactgta-ttttgatccacatttcaatgcagatgcaga-----------------------tttttttaatt--aaaaacatttctat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34898026 142 - 40319822 gcacatattca--------agtaaccttgtggaaccagagtatac-----------------aaaaagtcagtcctccatatctgcgggtttttcatcctgtgagtactgta-ttttgatccacatttcaatgcagatgcaga-----------------------tttttttaatt--aaaaacatttctat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4451816 142 - 9219162 gcacatattca--------agtaaccttgtggaaccagagtatac-----------------aaaaagtcagtcctccatatctgcgggtttttcatcctgtgaatactgta-ttttgatccacatttCAATGCAGATGCAGA-----------------------TTTTTTTAATT--AAAAACATTTCTAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977311 144 + 135778131 gcacatattca--------agtaaccctgtggaactagagtatac-----------------aaaaagtcagtcctccatatctgcgggtttttcatcctgtgaatactgta-ttttgatccacatttcaatgcaggtgctga---------------------tttttttttaatt--aaaaacatttctat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743675 142 - 3013352 gcacatattca--------agtaaccttgtggaaccagagtatac-----------------aaaaagtcagtcctccatatctgcgggtttttcatcctgtgaatactgta-ttttgatccacatttcaatgcagatgcaga-----------------------tttttttaatt--aaaaacatttctat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5974885 141 + 8656713 gcatatattca--------agtaaccctgtggaaccagagtatac-----------------aaaaagtcagtcctccaaatctgcgggtttttcatcctgcgaatactgta-ttttgatctacatttcaatgcagatgctga------------------------ttttttaatt--aaaaatatctctac i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129403868 140 - 190850796 gcacatactca--------agtaacgctgtggaaccccagtatac-----------------aaaaagtcaggcctccatatctgtgggattttcaccccatgaatactgta-ttttgatccacatttcattgcagacgctga-----------------------tttttttaactaaaaaaatat----at i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487322 138 - 25294431 gcacatactca--------agtaactctgcggaacttgaatacac-----------------aaaaagtcagacccccacatctgttggtttttcatcccatgaatactgtg-ttttgatccacatttcattgcagatgctga-----------------------tattttaaatt--aaaaatat----at i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4043888 155 - 6311556 gcacatactca--------agtaaccctgtggaaccagagtatacaaaaaaaaaaaaaaaaaaaaaagtcagcgctccatatgtgtgactttttcatcccatgaatactgta-ttttgatccacatttcattgcaggtgctga-----------------------ttttttaaatt--aaaaaaat----at i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14898890 137 + 15034901 gcacatactca--------agtaacgctgtggaacttgagtatac-----------------aaaaagtcagcgctccatatct-tgggattttcatcccatgaatactgta-ttttgatccacatttcattgcagatgctga-----------------------ttttttaaatt--aaaaaaat----at i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927475 172 - 3201129 gcatacactgaagacctgcagtttcgctgtagaacccacatatac-----------------taaaagttggccttccatatcctctgctttcccagaccacaaataccataggtgtggtccacgtttggttatagatttggaaacgaagactacacagttattactatacttaata--aaaacaat--acat i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707207 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44021505 0 - 53741614 C a score=398665.000000 s hg38.chr9_KI270719v1_random 26829 53 + 176845 ataaggggatgcacacagctcaagctcatgttgttcaagtgtcaaccgTACT--------T s panTro5.chr4 135051591 57 + 194502333 ataaggggatgcacacagctcaagctcattatgttcaagtgtcaacCATACTAA---T-TT i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9326 57 + 11745 ataaggggatgcacacagctcaagctcattatgttcaagtgtcaacCATACTAA---T-TT i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 32158 54 - 70559 ataaggggatgcacacagctcaagctcatgttgttcaagtgtcaactgTACT-------TT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445735 58 - 115148730 ataaggggatgcacacagctcaagctcatgttgttcaagtgtcaaccgTATTAA--TT-TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387847 55 + 190429646 ataaggagatgcacacagcttaagctca---tgttcaagtatcaacCATACTGA--TT-TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906842 55 + 189454096 ataaggagatgcacacagcttaagctca---tgttcaagtatcaacCATACTGA--TT-TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34898168 55 - 40319822 ataaggagatgcacacagcttaagctca---tgttcaagtgtcaacCATACTGA--TT-TT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4451958 55 - 9219162 ATAAGGAGATGCACACAGCTTAAGGTCA---TGTTCAAGTATCAACCATACTGA--TT-TT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977455 57 + 135778131 ataaggggatgcacacagcttaagctca---tgttcaagcatcaacCATACTGATTTT-TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743817 55 - 3013352 ataaggagatgcacacagcttaagctca---tgttcaagtatcaacCACACTGA--TT-TT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5975026 55 + 8656713 ataaggggatgcacacagcttaagctca---tgttcaagtatcaacCATACTGA--TT-TT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404008 58 - 190850796 ataaggggatgcacacaactcaagctcatgttgctcaagggtcaacCATAATAA--AG-AT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487460 59 - 25294431 ataaggggatacacacagctcaagctcatgttgctcaagggtcaacCTTAATAA--AGTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044043 57 - 6311556 ataa-gggattcatacagctcaagctcattttgctcaaggatcaacCTTAATAA--AG-TT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899027 58 + 15034901 ataaggggatgcacacagctcaagctcatgttgctcaagggtcaacCATAATAA--AG-AT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927647 57 - 3201129 gtaagtggagtggtgcagttcaaacctgtgttgctcagg-gtcaactgCACTGC--GT-CA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44021505 17 - 53741614 -----------------------------------------ATAAAAGCGCTAA--AT-TA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707207 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=3504291.000000 s hg38.chr9_KI270719v1_random 26882 298 + 176845 TTTTATTTCTGTCCAATATAATTTAAATAACATAATTCTGTGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCGTAACAATGTGTTTAAATTCcaagaaatggtggctagcaaatttaattctcatctctgctctgccacagacaagttctgaagtcttgagc-aaatca-t-gagt--atctatctct-agcttactcatcttaagaaggagccagtaagtagcaattatctttcagtgttcttatgagaagtaaataacctgtacacatcaatgctcagaacagagactgccatgt s panTro5.chr4 135051648 298 + 194502333 TTTTATTTCTGTCCAACATAATTTAAATAACATAATTCTGTGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCATAACAATGTGTTTAAATTCcaagaaatggtggctaggtaatttaattctcatctctgatctgccacagacaagttctgaagtcttgagc-aaatca-c-gagt--atctgtccct-agcttactcatcttaagaaggagccagtaagtagcaattatctttcagtgttcttatgaggagtaaataacctgtacacatcaatgcttagaacagagattgccatgt i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9383 298 + 11745 TTTTATTTCTGTCCAACATAATTTAAATAACATACTTCTGTGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCATAACAATGTGTTTAAATTCcaagaaatggtggctaggtaatttaattctcatctctgatctgccacagacaagttctgaagtcttgagc-aaatca-c-gagt--atctgtccct-agcttactcatcttaagaaggagccagtaagtagcaattatctttcagtgttcttatgaggagtaaataacctgtacacatcaatgcttagaacagagattgccatgt i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 32212 298 - 70559 TTTAATTTCTGTCCAATATAATTTAAATAACATAATTCTGTGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCATAACAATGTGTTTAAATTCcaagaaatggtggctagcaaatttaattctcatctctgctctgccacagacaagttctgaagtcttgagc-aaatca-t-gagt--atctgtctct-agcttactcatcttaagaaggagccagtaagtagcaattatctttcagtgttcttatgaggagtaaataacctgtacacatcaatgcttagaacagagattgccatgt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90445793 298 - 115148730 TTTGATTTCTGTGCAATATAATTTAAATAACATAATTATGCGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCATAACTGTGTGTTTAAATTCCAAGAAACGGTGGCTAGCTAATTTAATTCTCCtctctgctctgccacagacaagttctgaagtcttgagc-aaatca-t-gagt--atctgtccct-agcttactcatcttaagaaggagccagtaagtagcaattatctttcagtgttcttatgaggagtaaataacctgtacacatcaatgcttaggacagagactgccatgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131387902 299 + 190429646 TAAAATTTCTGTCCAATATAATTTAAATAACATAATTATGTGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCATAACGATGTGTTTAAATTCCAAGAAATGATCgctagctaatttaattctcatctcttctctgccacagacaagctgtaaagtcttgagcaaaatca-c-gagt--atctgtccct-aacttactcatcttaagaaggacccagtaagtaacaattatctttcagtgttctaatgaagagtaaataacctatgcatatcaatgcttagaacagagactaccatgc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130906897 299 + 189454096 TAAAATTTCTGTCCAATATAATTTAAATAACATAATTATGTGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCATAACGATGTGTTTAAATTCCAAGAAATGATCgctagctaatttaattctcatctcttctctgccacagacaagctgtaaagtcttgagcaaaatca-c-gagt--atctgtccct-aacttactcatcttaagaaggacccagtaagtagcaattatctttcagtgttctaatgaagagtaaataacctatgcatatcaatgcttagaacagagactaccatgc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34898223 299 - 40319822 TAAAATTTCTGTCCAATATAATTTAAATAACATAATTATGTGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCATAACGATGTGTTTAAATTCCAAGAAATGATCgctagctaatttaattctcatctcttctctgccacagacaagctgtaaagtcttgagcaaaatca-c-gagt--atctgtccct-aacttactcatcttaagaaggacccagtaagtagcaattatctttcagtgttctaatgaagagtaaataacctatgcatatcaatgcttagaacagagactaccatgc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4452013 299 - 9219162 TTAAATTTCTGTCCAATATAATTTAAATAACATAATTATATGAACTGCATGCCATTAATTACATATACTAAGAGGTGGCATAACGATGTGTTTAAATTCCAAGAAATGATCgctagctaatttaattctcatctcttctctgccacagacaagctgtaaagtcttgagcaaaatca-c-gagt--atctgtccct-aacttactcaccttaagaaggacccagtaagtagcaattatctttcagtgttcttatgaagggtaaataacctatgcatatcaatgcttagaacagagactaccatgc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977512 299 + 135778131 TTTTATTTCTGTTCAATATAATTTAAATAACATAATTATGTGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCATAACGATGTGTTTAAATTCCAAGAAATGGTCgctagctaatttaattctcatctcttctctgccacagacaagctgtaaagtcttgagcaaaatca-c-cagt--atctgtccct-aacttactcatcttaagaaggacccagtaagtagcaattatctttcagtgttcttatgaggagtaaataacctatacatatcaatgcttagaacagagactaccatgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2743872 299 - 3013352 TTAAATTTCTGTCCAATATAATTTAAATAACATAATTATGTGAACTGCATGTCATTAATTACATATACTAAGAGGTGGCATAACGATGTGTTTAAATTCCAAGAAATTATCgctagctaatttaattctcatctcttctctgccacagacaagctgtaaagtcttgagcaaaatca-c-gagt--atctgtccct-aacttactcatcttaagaaggacccagtaagtagcaattatctttcagtgttcttatgaagagtaaataacctatgcatatcaatgcttagaacagagactaccatgc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5975081 298 + 8656713 TT-AATTTCTGTCCAATATAATTTAAATAACATAATTATGTGAACTGCATGCCATTAATTACATATATTAAGAGGTGGCATAATGATGTGTTTAAATTCCAAGAAATGGTCgctagctaatttaattctcatctcttctctgccacagacaagctgtaaagtcttgagcaaaatca-c-gagt--atctgtccct-aacttactcatcttaagaaggacccagtaagtagcaattatctttcagtgttcttatgaggaataaataacctatacatatcaatgcttagaacagagactatcatgt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404066 298 - 190850796 TTTTATTTCTGTCCAATATAATTTAAATAACATAATTATGTGATCTGCGTGCCGTTAATTACATATACTAACACGTGGCATAACGATGTGTTTAAATTCCAAGAAATGGTGgctagctaatttaattctcatctctgctctgcctcagacaagctttgaagtcttgagc-aaatca-t-ggat--atctgtccct-agctaactcatcttaagaaggagttaataagtggcaattacctttcagtgttcttatgaggagtgaataatctgtacatatcaatgctcagaacacagactgccatac i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487519 296 - 25294431 TTTTATTTCTGTCCAATATAATCTAAATAACATAATTATGTGATCTGCATGCCATTAATTACATATACTAACAGGTGGCATAACAATGTGTTTAAATTCCAAGAAATGGTGgctagctaatttaattctcatctctgctctgccacagacaagctttgaagtcttgagc-aaatca-t-gggt--atctgtccct-agcttactcatgttaagaaggagctagtaagtagcaattatctttcagtgttcttatgaggagtaaataatctgtacatatcaatgctcaga--acagactgccatgt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044100 295 - 6311556 TTTTATTTCTGTCCAATATAATTTAAATAACATAATTATGTGATCTGCATGCCATTAATTACATATACTAACAGGTGgcataacagagtgtttaaattccaagaaatggtggctagctaatttaattctcatctctgctctgcctcag-caagctttgaagtcttgagc-aaatcg-t-gggt--atctgtccct-agcttactcatcttaagaaggagctagtaagtagcaattacctttcagtgttcttacgaggggtaaataatctgtacatatcaatgctcaga--acagactgccatgt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899085 297 + 15034901 TTTTATTTCCGTCCAATATAATTTAAATAACATAATTATGTGATCTATATGCCATTAATTACATATACTAACAGGTGGCATAATGATGTGTTTAAATTCCAAG-AATGGTGGCTACCTAATTTAAttctcatctccgctctgtctcagacaagctttgaagtcttgagc-aaatca-t-gggt--atctgtccct-agcttactcatcttaagaaggagttagtaagtggcgattacctttcagtgttcttatgaggagtgaataatctgtacatatcaatgctcagaacacagactgccgtgt i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927704 294 - 3201129 TTTTATTTGCACTCAGTACAACTTAGATAACATAATTATATAGTATGCATATCATTATTTACATATACT---AGGTGGCATAATGAGGTGTTTAAATTCCAAGAAttggtggctagctaatttaatttcaaaatctgctctgccacaaactgttcctgaagtcttgaat-aaatca-ctgaat--atctgtccctcagctttctcatcttatgaaggagttaataa-tggcaattgcttttcagtgctcttatgaggaataaataacccacatataaaaatgcttatacc--agactgctatgt i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44021522 277 - 53741614 TTTTATCTGTGTCCAATGTAACCTAAATAACACAATTATATGACATGAAAATCATTATTTACATATAGGAAGTGGTGACAAAATGATGTGTTTTAGTTCCAGGAACTAGAGGGCAACTAATTtagttctaatatttgctgtgc-----------tttgaagtcttgagaaaaatcagt-gaat-------ttcat-agctttcttat------aaggaaataat-agtagtaattacctcttggtcttcttgtgagaattaaatgacctgtacatataaatgctcagaacaggagctattgtgt i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1707207 300 + 5974691 ttttgtgtgtttccaatgtaatctaaataacatggTTATA-GGCATCTATATCTTTTTTTACATATGTTAACAGATGACATCTTGTAGTTttaaaattcctggttctggaggttaaagaactcaatcccaatctctgatctgtcacacattagttctgaagtcttgagc-aaatcaat-gaatttttctgtccctcagtttcctcatcttaagaaagaaccaat-tgtagcaaatatttcttggcattcttgtgagaattaaatgacctatagatataaacacttagaatagggactgctatat i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=6460.000000 s hg38.chr9_KI270719v1_random 27180 1 + 176845 g s panTro5.chr4 135051946 1 + 194502333 g i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9681 1 + 11745 g i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 32510 1 - 70559 g i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90446091 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131388201 1 + 190429646 g i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130907196 1 + 189454096 g i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34898522 1 - 40319822 g i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4452312 1 - 9219162 g i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977811 1 + 135778131 g i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2744171 1 - 3013352 g i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5975379 1 + 8656713 g i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404364 1 - 190850796 t i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487815 1 - 25294431 g i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044395 1 - 6311556 g i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899382 1 + 15034901 g i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927998 1 - 3201129 t i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1707507 1 + 5974691 g i dasNov3.JH569232 C 0 I 1385 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44021799 0 - 53741614 C a score=1021241.000000 s hg38.chr9_KI270719v1_random 27181 212 + 176845 gtattatgtccggagttggttcctgcctgtgggtttggtgggttcgtggtctcgctgacttcaagaatggagtcatggacctttcc----cgtgttacagatcttaaagatcacgtggacccgacgagtgagcggtagcaaggtttattgtgaagagcaaaaggagaaagcttccacagcatggaaggtgacaccagcagattgccgctgctggct s panTro5.chr4 135051947 203 + 194502333 gtattatgtccggagttggttcctgcc---------ggtgggtttgtggtcttgctgacttcaagaatggagtaacggacctttgc----tgtgttacagatcttaaagatcgcatggacccaacgagtgagtggtagcaaggtttatcgtgaagagcaaaaggacaaagcttccacagcatggaaggtgacaccagcaggttgccgctgctggct i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9682 203 + 11745 gtattatgtccggagttggttcctgcc---------ggtgggtttgtggtcttgctgacttcaagaatggagtaacggacctttgc----tgtgttacagatcttaaagatcgcatggacccaacgagtgagtggtagcaaggtttatcgtgaagagcaaaaggacaaagcttccacagcatggaaggtgacaccagcaggttgccgctgctggct i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 32511 207 - 70559 gtattatgtccggagttggttcctgcc-gtgggtttggtgggttcgtggtctc---gacttcaagaatggagtcacggaccttt-c----cgtgttacagatcttaaagatcgcgtggacccaacgagtgagcggtagcaaggtttattgtgaagagcaaaaggagaaagcttccacagcatggaaggtgacaccagcaggttgctgctgctggct i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90446092 212 - 115148730 gtattatgtctggagttggttcctgccggtgggttcagtgggttcgtggtctcgctgacttcaagaatggagtcgtggacctttgc----cctgttacatatcttaaagattgcatagacccaatgagtgagcggtagcaaggtttattgtgaagagcaaaaggacaaaccttccacagcatggaaggggacactagcaggttgctgcggctggct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131388202 206 + 190429646 gtaTtgcgtctggagttggttcctgcc---------ggtgggtgtgtagtctcgctgacttcaagaatggagccacagaccttcgcggtgagtgttacagatcttaaagatcgcatggagccgaagagtgagcaatagcaacgtttgttgtg-agagcaaaaggacacagctcccacagcatggaaggggacctgagcaggttgctgctgctgact i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130907197 206 + 189454096 gtattgcgtctggagttggttcctgcc---------ggtgggtgtgtagtctcgctgacttcaagaatggagccacagaccttcgcggtgagtgttacagatcttaaagatcgcatggagccgaagagtgagcaatagcaacgtttgctgtg-agagcaaaaggacacagctcccacagcatggaaggggacctgagcaggttgctgctgctgact i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34898523 206 - 40319822 gtaTtgcgtctggagttggttcctgcc---------ggtgggtgtgtagtctcgctgacttcaagaatggagccacagaccttcgcggtgagtgttacagatcttaaagatcgcatggagccgaagagtgagcaatagcaacgtttgctgtg-agagcaaaaggacacagctcccacagcatggaaggggacctgagcaggttgctgctgctgact i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4452313 206 - 9219162 gtaTtgcgtctggagttggttcctgcc---------ggtgggtgtgtagtctcgctgacttcaagaatggagccacagaccttcgcggtgagtgttacagatcttaaagatcgcatggagccgaagagtgagcaatagcaacgtttgttgtg-agagcaaaaggacacagctcccacagcatggaaggggacctgagcaggttgctgctgctgact i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78977812 206 + 135778131 gtattgtgtctgcagttggttcctgcc---------ggtggatgtgtgatctcgctgacttcaagaatggagccacagaccttcgcggtgagtgttacagatcttaaagatcgcatggagccaaagagtgagcagtagcatcgtttgttgtg-agagcaaaaggacacagcttccacagcatggaaggggacctgagtaggttgctgctgctgact i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2744172 206 - 3013352 gtaTtgcgtctggagttggttcctgcc---------ggtggatttgtagtctcgctgacttcaagaatggagccacagaccttcgcggtgagtgttacagatcttaaagatcgcatggagccgaagagtgagcaatagcaacgtttgttgtg-agagcaaaaggacacagctcccacagcatggaaggggacctgagcaggttgctgctgctgact i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5975380 206 + 8656713 gtaTtgtgtctggagttggttcctgcc---------tatgggtgtgtggtctcgctgacttcaagaatggagccacagaccttcgcggtgagtgttacagatcttaaagatcgcatggagccaaagagtgagcaatagcaaagtttgttgtg-agagcaaaaggacacagcttccacggcatggaaggagacctgagcaggttgctgctgctgact i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707508 1385 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44021799 0 - 53741614 C e otoGar3.GL873702 927999 0 - 3201129 C e aotNan1.NW_018507635v1 14899383 0 + 15034901 C e cebCap1.NW_016107420v1 4044396 0 - 6311556 C e saiBol1.JH378129 6487816 0 - 25294431 C e calJac3.chr3 129404365 0 - 190850796 C a score=-9300.000000 s hg38.chr9_KI270719v1_random 27393 2 + 176845 -gg s panTro5.chr4 135052150 2 + 194502333 -gc i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9885 2 + 11745 -gc i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 32718 2 - 70559 -gg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90446304 2 - 115148730 -gg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131388408 1 + 190429646 -g- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130907403 1 + 189454096 -g- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34898729 1 - 40319822 -g- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4452519 1 - 9219162 -g- i cerAty1.NW_012000798v1 C 0 C 0 s papAnu3.chr5 122188658 2 + 178775436 gg- i papAnu3.chr5 N 0 N 0 s manLeu1.NW_012103277v1 2744378 1 - 3013352 -g- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5975586 2 + 8656713 gg- i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707508 1385 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44021799 0 - 53741614 C e otoGar3.GL873702 927999 0 - 3201129 C e aotNan1.NW_018507635v1 14899383 0 + 15034901 C e cebCap1.NW_016107420v1 4044396 0 - 6311556 C e saiBol1.JH378129 6487816 0 - 25294431 C e calJac3.chr3 129404365 0 - 190850796 C e chlSab2.chr7 78978018 0 + 135778131 C a score=1401911.000000 s hg38.chr9_KI270719v1_random 27395 291 + 176845 --ggggtggccagcttttattcacgtattggcccctcccatgttctatttttgtcctatcagagtg--ccc-tttttttcaatcctccctgcaattggctacttttaggatcctgctgattggtgcattttacagagcgctgattggtgcattttacagagcgctgattggtgcatttcacaatc-----------------------------------------------------------ctcttgctagctacagagcactgattggtgcattttacaatcctcttgctagacaaaaaagttctccaagtccccactccacctaggaagtccagcgggcttcacctctca s panTro5.chr4 135052152 289 + 194502333 --gg--cggccaacgtttattcccgcatcggcccctcccatgttctgtttttgtcctatcagagtg--ccc-tttttttcaatcctccctgcaattggctacttttaggatcctgctgattggtgtgttttacagagcgctgattggtgcattttacagagcactgattggtgcattttacaatt-----------------------------------------------------------ctcttgctagctacagagcactgattggtgcattttacaatcctcttgctagacaaaaaagttctccaagtccccactccacctaggaagttcagctggcttcacctctca i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 9887 289 + 11745 --gg--cggccaacgtttattcccgcatcggcccctcccatgttctgtttttgtcgtatcagagtg--ccc-tttttttcaatcctccctgcaattggctacttttaggatcctgctgattggtgtgttttacagagcgctgattggtgcattttacagagcactgattggtgcattttacaatc-----------------------------------------------------------ctcttgctagctacagagcactgattggtgcattttacaatcctcttgctagacaaaaaagttctccaagtccccactccacctaggaagttcagctggcttcacctctca i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 32720 284 - 70559 --gg--tggccagcttttattcacgtattggcccctcccatgttc-atttttgtcctatcagagtg--ccc--ttttttcaatcctccctgcaattggctacttttaggatcctgctgattggtgcgttttacagagcgctgattggtgcattttacagag--ctgattggtgcattttacaatc-----------------------------------------------------------ctcttgctagctacagagcactgattggtgcattttacaatcctcttgctagacaaaaaagttctccaagt-cccactccacctaggaagtccagctggcttcacctctca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90446306 289 - 115148730 --gg--tggccaagttttagtcccgtattggcccctcccatgttctgtttttgtcctatcagaatg--ccc-tttttttcaatcctccctgcaattggctacttttaggatcctgctgattggtgcattttacagagcgctgattagtgcattttacagagcgctgattagtgcattttacaatc-----------------------------------------------------------cacttgctggctacagagcactgattggtgcattttacaatcctcttgctagacaaaaaagttctccaagtccccactccacctaggaagtccagctggcttcacctctca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131388409 267 + 190429646 gggg--tggccagcttttattcccttattggacccgcccatgttctgtttttgtcctatcagagtg--ccc-tttttttcaatccttcctgtgagtggctacttttaagatcctgctgattggtgtgttttacagagtg------------------------ccagttggtgcattttacaatc-----------------------------------------------------------ctcttgctagctacagagcgctgattggtgtgttttataatcctcttgctagacaaaaaagttatccaagtccctgctcctcctaggaagtcaagctggcttcacctctca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130907404 267 + 189454096 gggg--tggccagcttttattcccttattggccccacccatgttctgtttttgtcctatcagagtg--ccc-tttttttcaatccttcctgtgagtggctacttttaagatcctgctgattggtgtgttttacagagtg------------------------ccagttggtgcattttacaatc-----------------------------------------------------------ctcttgctagctacagagcgctgattggtgtgttttataatcctcttgctagacaaaaaagttatccaagtccctgctcctcctaggaagtcaagctggcttcacctctca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34898730 267 - 40319822 gggg--tggccagcttttattcccttattggccccgcccatgttctgtttttgtcctatcagagtg--ccc-tttttttcaatccttcctgtgagtggctacttttaagatcctgctgattggtgtgttttacagagtg------------------------ccagttggtgcattttacaatc-----------------------------------------------------------ctcttgctagctacagagcgctgattggtgtgttttataatcctcttgctagacaaaaaagttatccaagtccctgctcctcctaggaagtcaagctggcttcacctctca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4452520 267 - 9219162 gggg--tggccagcttttattcccttattggccctgcccatgttctgtttttgtcctatcagagtg--ctc-tttttttcaatccttcctgtgagtggctacttttaagatcctgctgattggtgtgttttacagagtg------------------------ccagttggtgcattttacaatc-----------------------------------------------------------ctctggctaactacagagcgctgattggtgtgttttataatcctcttgctagacaaaaaagttatccaagtccctgctcctcctaggaagtcaagctggcttcacctctca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78978018 269 + 135778131 gggg--tggccagcttttattccctttctggccccacccatgttctgtttttgtcctatcagagtgccccc-tttttttcaatccttcctgcgagtggctacttttaagatcctgctgattggtgtgttttacagagtg------------------------ccagttggtgcattttacaatc-----------------------------------------------------------ctcttgctagctacagagcgctgattggtgtgttttacaatcctcttgctagacaaaaaagttatccaagtccctgctcctcctaggaagtcaagctggcttcacctctca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2744379 267 - 3013352 gggg--tggccagcttttattcccttattggccctgcccatgttctgtttttgtcctatcagagtg--ccc-tttttttcaatcattcctgtgagtggctacttttaagatcctgctgattggtgtgttttacagagtg------------------------ccagttggtgcattttacaatc-----------------------------------------------------------ctctggctagctacagagcgctgattggtgtgttttataatcctcttgctagagaaaaaagttatccaagtccctgctcctcctaggaagtcaagctggcttcacctctca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5975588 325 + 8656713 --gg--tggccagcttttattcccttattggccctgctcatgttctgtttttgtcctatctgagtg--cccttttttttcaatccttcctgcaagtggctactcttaagatcctgctgattggtctgttttacagagtg------------------------ccagttggtgcattttacaatcctcttgctagctacagagcactgattggtgtgttttctgattggtgcattttacaatctctcttgctagctacagagcactgattggtgtgttttacaatcctcttgccagacaaaaaagttatccaagtccctgctcctcctaggaagtcaagctggcttcacctctca i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707508 1385 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44021799 0 - 53741614 C e otoGar3.GL873702 927999 0 - 3201129 C e aotNan1.NW_018507635v1 14899383 0 + 15034901 C e cebCap1.NW_016107420v1 4044396 0 - 6311556 C e saiBol1.JH378129 6487816 0 - 25294431 C e calJac3.chr3 129404365 0 - 190850796 C a score=50728.000000 s hg38.chr9_KI270719v1_random 27686 4 + 176845 gtat s panTro5.chr4 135052441 4 + 194502333 gtat i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 10176 4 + 11745 gtat i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 33004 4 - 70559 gtat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90446595 4 - 115148730 gtat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131388676 4 + 190429646 GTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130907671 4 + 189454096 gtat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34898997 4 - 40319822 GTAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4452787 4 - 9219162 GTAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78978287 4 + 135778131 gtat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2744646 4 - 3013352 GTAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5975913 4 + 8656713 GTAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404365 4 - 190850796 gtat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487816 4 - 25294431 gtat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044396 4 - 6311556 gtat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899383 4 + 15034901 gtat i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 927999 4 - 3201129 gtat i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707508 1385 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44021799 0 - 53741614 C a score=924679.000000 s hg38.chr9_KI270719v1_random 27690 87 + 176845 gttctgaataaattgggctat-------ta---AATATGTGATATGAAT---TAAT---CAAGCAGAGAAAAAGTTACTAGTGACAGGGAAAAGG----------AGAAAATA-------- s panTro5.chr4 135052445 87 + 194502333 gttctgaataaatttggctat-------ta---AATACGTGATATGAAT---TAAT---CAAGCAGAGAAAAAGTTACTAGTGACAGGGAAAAGG----------AGAAAATA-------- i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 10180 87 + 11745 gttctgaataaatttggctat-------ta---AATACGTGATATGAAT---TAAT---CAAGCAGAGAAAAAGTTACTAGTGACAGGGAAAAGG----------AGAAAATA-------- i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 33008 87 - 70559 gttctgaataaattgggctat-------ta---AATATGTGATATGAAT---TAAT---CAAGCAGAGAAAAAGTTACTAGTGACAGGGAAAAGG----------AGAAAATA-------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90446599 87 - 115148730 gttctgaataaatttggctat-------ta---AATACGTGATATGAAT---TAAT---CAAGCAGAGAAAAAGTTACTAGTGACAGGGAAAAGG----------AGAAAATA-------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131388680 87 + 190429646 ATTCTGAATAAGTTTACCTAT-------TA---AATATGTGATATGAAT---TAAT---CAAGCACAGAAAAAGTTACTAGTGACAAGGAAAAGG----------AGAAAATA-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130907675 87 + 189454096 attctgaataagtttacctat-------ta---AATATGTGATATGAAT---TAAT---CAAGCACAGAAAAAGTTACTAGTGACAAGGAAAAGG----------AGAAAATA-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34899001 87 - 40319822 ATTCTGAATAAGTTTACCTAT-------TA---AATATGTGATATGAAT---TAAT---CAAGCACAGAAAAAGTTACTAGTGACAAGGAAAAGG----------AGAAAATA-------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4452791 87 - 9219162 ATTCTGAATAAGTTTGCCTAT-------TA---AATATGTGATGTGAAT---TAAT---CAAGCACAGAAAAAGTTACTAGTGACAAGGAAAAGG----------AGAAAATA-------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78978291 87 + 135778131 attctgaataagtttgcctat-------ta---AATATGTGATATGAAT---TAAT---CAAGCACAGAAAAAGTTACTAGTGACAGGGAAAAGG----------AGAAAATA-------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2744650 87 - 3013352 ATTCTGAATAAGTTTGCCTAT-------TA---AATATGTGATATGAAT---TAAT---CAAGCACAGAAAAAGTTACTAGTGACAAGGAAAAGG----------AGAAAATA-------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5975917 86 + 8656713 ATTCTAAATAAG-TTGCCTAT-------TA---AATATGTGATATGAAT---TAAT---CAAGCACAGAAAAAGTTACTAGTGACAGGGAAAAGG----------AGAAAATA-------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404369 87 - 190850796 gttcagaataaatttggctac-------ta---AATACATGATATAAAT---TAAT---CAAGCACAGAAAAAGTTACTACTGACAGGGAAAAGG----------AGAAAATA-------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487820 87 - 25294431 gttcagaataaatttggctat-------ta---AATACATGATATAAAT---CAGT---CAAGCACAGAAAAAGTTACTACTGACAGGGAAAAGG----------AGAAAATA-------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044400 87 - 6311556 gttcagaataaatttggctat-------ta---AATACATAATATAAAT---TAAT---CAAGGACAGAAAAAGTTAATACTGACAGGGAAAAGG----------AGAAAATA-------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899387 85 + 15034901 gttcagaataaatttggctat-------ta---AATACATGATATAAAT---TAAT---CAAGCACAG--AAAGTTACTACTGACGGGGAAAAGG----------AGAAAATA-------- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 928003 107 - 3201129 gttgtgaataaatttggctattaAATGCTA---AATACATAGTATAGATTTATAAT---CAAGCATAAAATAATTTGCTAGAGATAGAAAATAGGTATTAAGCGCAAGATTTA-------- i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44021799 101 - 53741614 gtcctgaataaatctgactat-------tCAATAATACATGTTAGAGAT---TAACAAGTAAGCTTAGAAGAGGTTGCTAATGACAGGGAAAAAG----------AGAACTGAGCACAAGA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26304577 710 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707508 1385 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=489711.000000 s hg38.chr9_KI270719v1_random 27777 38 + 176845 -----TGTATTCAATATTATTTTGTAAACAATTTATAAATATG s panTro5.chr4 135052532 38 + 194502333 -----TGTATTCGATATTATTTTGTAAACAATTTATAAATATG i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 10267 38 + 11745 -----TGTATTCGATATTATTTTGTAAACAATTTATAAATATG i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 33095 38 - 70559 -----TGTATTCAATATTATTTTGTAAACAATTTATAAATATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90446686 38 - 115148730 -----TGTATTCAATATTATTTTGTAAACAACTTATAAATATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131388767 38 + 190429646 -----TGTGTTCAATATTATTTTGCAAACAATTTACAAATATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130907762 38 + 189454096 -----TGTGTTCAATATTATTTTGCAAACAATTTACAAATATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34899088 38 - 40319822 -----TGTGTTCAATATTATTTTGCAAACAATTTACAAATATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4452878 38 - 9219162 -----TGTGTTCAATATTATTTTGCAAACAATTTACAAATATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78978378 38 + 135778131 -----TGTGTTCAATATTATTTTGTAAATAATTTATAAATATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2744737 38 - 3013352 -----TGTGTTCAATATTATTTTGCAAACAATTTACAAATATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5976003 38 + 8656713 -----TGTGTTCAATATTATTTTGTAAACAATTTATAAATATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404456 38 - 190850796 -----TGTATTCAATATTATTTTGTCAACAATTTATAAATATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487907 38 - 25294431 -----TGTATTCAATATTATTTTGTCAACAATTTATAAATATG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044487 38 - 6311556 -----TGTATTCAATATTACTTTGTCAACAATTTATAAGTATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899472 38 + 15034901 -----TGTATTCAATATTATTTTGTCAACAATTTATAAATATG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26305287 38 - 93316391 -----TGTATTCAATATCATTTTGTCAACAACTTATGAATATG i micMur3.chr14 I 710 I 97 s otoGar3.GL873702 928111 38 - 3201129 -----TGCATTTAATATCATTTTATCAACAAATTATACATATG i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44021900 43 - 53741614 TTTATTGTACCCTATAACATTGTGTCAACAACTTGTAAATATT i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707508 1385 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1081417.000000 s hg38.chr9_KI270719v1_random 27815 107 + 176845 CTGCACCTAT--GAG---TTTCTTCTCAGTACCTTAGAAACTATAAcaccatggaaaattttggatagtttagggaagtgcattatttggtaatgtgaaaaataagatggtc s panTro5.chr4 135052570 107 + 194502333 CTTCATCTAT--GAG---TTTCTTCTTAGTACCTTAGAAACTGTAAcaccacggaaaattttggatagtttagggaagtgcattaattggtaatgtgaaaaataagatgatt i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 10305 107 + 11745 CTTCATCTAT--GAG---TTTCTTCTTAGTACCTTAGAAACTGTAAcaccacggaaaattttggatagtttagggaagtgcattaattggtaatgtgaaaaataagatgatt i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 33133 106 - 70559 CT-CACCTAT--GAG---TTTCTTCTCAGTACCTTAGAAACTATAAcaccatggaaaattttggatagtttagggaagtgcattatttggtaatgtgaaaaataagatggtc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90446724 107 - 115148730 CTTCACCTAT--GAG---TTTCTTCTTAGTACCTTAGAAACTATAAcaccaaggaaaattttgggtagtttagggaagtgcattatttgataatgtgaaaaataagatgatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131388805 107 + 190429646 CTTCACCCGT--GAG---TTTCTTCTTAGTACCTCAGAAACTATAAcaccatggaaaattttggatagtttagggaagtgctttatttgataatgtgaaaaataaggtgatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130907800 107 + 189454096 CTTCACCTGT--GAG---TTTCTTCTTAGTACCTCAGAAACTATAAcaccatggaaaattttggatagtttagggaagtgctttatttgataatgtgaaaaataaggtgatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34899126 107 - 40319822 CTTCACCTGT--GAG---TTTCTTCTTAGTACCTCAGAAACTATAAcaccatggaaaattttggatagtttagggaagtgctttatttgataatgtgaaaaataaggtgatt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4452916 107 - 9219162 CTTCACCTGT--GAG---TTTCTTCTTAGTACCTCAGAAACTATAAcaccatggaaaattttggatagtttagggaagtgctttatttgataatgtgaaaaataaggtgatt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78978416 98 + 135778131 CTTCACCTGT--GAG---TTTCTTCTTAGTACCTCAGAAACTATAACACCATGGAAAATTTTGGATAGTTTAGGGAAG---------TGATAATGTGAAAAATAAGGTGATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2744775 107 - 3013352 CCTCACCTGT--GAG---TTTCTTCTTAGTACCTCAGAAACTATAAcaccatggaaaattttggatagtttagggaagtgctttatttgataatgtgaaaaataaggtgatt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5976041 107 + 8656713 CTTCACCTGT--GAG---TTTCTTCTTAGTACCTCAGAAACTATAAcaccatggaaaattttggatagttcagggaagtgctttatttgataatgtgaaaaataaggtaatt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404494 106 - 190850796 TTTCACCTGT--GAG---TTTCTTTTTAGTACCTTAGAAACTGTAATACCACTAAAAATTTT-GATAGTTTAGAGAAGTGTTTTGTTTGGTAATGTGAAAAATAAGGTGATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6487945 107 - 25294431 TTTCACCTGT--GAG---TTTCTTTTTAGTACCTTAGAAACTGTAATATCACCAAAAATTTTGGATAGTTTAGAGAAGTGTTTTGTTTGGTAATGTGAAAAATAAGGTGACT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044525 107 - 6311556 TTTCACCTGT--GAG---TTTCTTTTTAGTAACTTAGAAACTGTAATACCACTAAACATTCTGGATAGTTTAGAGAAGTGTTTTGTTTGGTAATGTGAAAAATAAGGTGATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899510 101 + 15034901 CTTCACCTGT--GAG---TTTCTTTTCAGTACCTTAGAAACTGTAATACCACTAAAAATTTTGGGTAGTTTAGAGAAGAGCTTTATTTGGTAATGTGAAAAATAAG------ i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 928149 97 - 3201129 TTTCTCCTGT--GAGAGTCTCTTTTTTTGTATCCCTGGAATT-----------TAAAATTTGGAATATGTGAGGACAGTGCTTTATTTGGTAACATGGGGA--AAGGTGCTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44021943 106 - 53741614 TCTCTCTTATTAGAA---tctctttttaataccctagagattttaataccatagtgaattt-ggttaggtgagagaagtgctttattttatgctgtgggaa--gatggaact i canFam3.chr19 C 0 C 0 e micMur3.chr14 26305325 97 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707508 1385 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=2036681.000000 s hg38.chr9_KI270719v1_random 27922 174 + 176845 gtgataaagcaacttggg-aaaaaagaaa---tggcatgaatcttgagaacacgtaccttctgagaattttcatgtttagaaaagagcaagctaaaaatctggaagcgtatttgttcac-aggcaattttcaattggtctcaggcatttct-gtgcatcttgcaa--atagaaaggcactag s panTro5.chr4 135052677 174 + 194502333 gtgataaagcaacttggg-aaaaaagaaa---tggcatgaatcttgggaacatgtactttctgagaattttcatgtttagaaaagagtaagctaaaaaactggaagcgtatttgttgag-aggcaattttcaattggtctcatgcatttct-gtgcatcttgcaa--atagaaaggcactag i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 10412 174 + 11745 gtgataaagcaacttggg-aaaaaagaaa---tggcatgaatcttgggaacatgtactttctgagaattttcatgtttagaaaagagtaagctaaaaaactggaagcgtatttgttgag-aggcaattttcaattggtctcatgcatttct-gtgcatcttgcaa--atagaaaggcactag i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 33239 174 - 70559 gtgataaagcaacttggg-aaaaaagaaa---tggcatgaatcttgagaacacgtactttctgagaattttcatgtttagaaaagagcaagctaaaaatctggaagcgtatttgttcac-aggcaattttcaattggtctcatgcatttct-gtgcatcttgcaa--atagaaaggcactag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90446831 175 - 115148730 gtgataaagcaacttgggaaaaaaagaaa---tggcatgaatcttgagaacaggtactttctgagaattttcatgtttggaaaagagcaagctaaaaatttggaagcgtatttgttgag-aggcaattttcaattggtgtcatgcatttct-gtgcatcttgcaa--atagaaaggcactag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131388912 174 + 190429646 gtgataaagcaacttggg-aaaaaagaaa---tgacatgaatcttgaggacacgtactttctgagaactttcatgtctagaaaagagcaagctaaaaatctggaagcgtatttgttgag-aggcaagtttcaattggtctcatgtatttct-gtgcatcttacaa--atagagaggcactgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130907907 174 + 189454096 gtgataaagcaacttggg-aaaaaagaaa---tgacatgaatcttgaggacacgtactttctgagaactttcatgtctagaaaagagcaagctaaaaatctggaagcgtatttgttgag-aggcaagtttcaattggtctcatgtatttct-gtgcatcttacaa--atagagaggcactgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34899233 174 - 40319822 gtgataaagcaacttggg-aaaaaagaaa---tgacatgaatcttgaggacacgtactttctgagaactttcatgtctagaaaagagcaagctaaaaatctggaagcgtatttgttgag-aggcaagtttcaattggtctcatgtatttct-gtgcatcttacaa--atagagaggcactgg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4453023 174 - 9219162 gtgataaagcaacttggg-aaaaaagaaa---tcacatgaatcttgaggacacgtactctctgagaactttcatgtctagaaaagagcaagctaaaaatctggaagcgtatttgttgag-aggcaagtttcaattggtctcatgtatttct-gtgcatcttacaa--agagagaggcactgg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78978514 176 + 135778131 GTGATAAAGCAACTTGAG-AAAAAAGAAA---TGACATGAATCTTGAGGACACGTACTTTTTGAGAACTTTCATGTTTAGAAAAGAGCAAGCTAAAAATCTGGAAGCATATTtgttgag-aggcaattttcaataggtctcatgtatttct-gcgcatcttacaaatagagagaggcactgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2744882 172 - 3013352 gtgataaagcaacttggg-aaaaaagaaa---tgacatgaatcttgaggacacgtac--tctgagaactttcatgtctagaaaagagcaagctaaaaatctggaagcgtatttgttgag-aggcaagtttcaattggtctcatgtatttct-gtgcatcttacaa--agagagaggcactgg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5976148 174 + 8656713 gtgataaagcaatttggg-aaaaaagaaa---tggcatgaatcttgaggacacgtactttctgagaactttcatgtttagaatagagcaagctaaaaatctggaagcgtatttgttgag-aggcaattttcaattggtctcatgtatttct-gtgcatcttacaa--atagagaggcactgg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404600 172 - 190850796 GTGATAAAGCAATTTGG--AAAAAAGAAA---TGGCATGAATCTTGGGGACAGGTACTTCCTGAGA--TTTCATGTTTAGGAAAGACCAAGCTAAAAATATGGAAGCACATTtattgagaagacaatttttacttggtctcatgtatttct-gttgatcttacaa--atagagaggcaccag i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6488052 172 - 25294431 GTGATAAAGCAACTTGG--AATAAAGAAA---TGGCATGAATCTTGAGGACACATACTTTCTGAGA--GTTCACGTTTAGGAAAGAGCAAGTTAAAAATATGGAAGCGTATTTACTGAgaagacaatttttacttgatctcatgtatttct-gttaatcttacaa--atagagaggcactag i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044632 172 - 6311556 GTGATAAAGCAACTTGG--AAAAAAGAAA---TGGCATGAATCTTGAGAACAGGTAGTGTCTGAGA--TTTCATGTTTAGGAAAGAGCAAGCTAAAAATATGAAAGCGTATTtgttgagaagacaattttcacttggtctcatgtattcct-gtagatcttgcaa--atagagaggcactag i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899611 172 + 15034901 GTGATAAAGCAACTTGG--AAAAAAGAAA---TGGCGTGAATCTTGAGGACAGGTACTTTCTGAGA--TTTCATGTTTAGGAAAGAGCAAGCTAAAAATATGGAAGCGTATTtgttgagaagacgattttctcttggtctcatgtatttct-gtggatcctacaa--atagagtggcactag i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26305422 173 - 93316391 gtgaaaaagcaacttgg--aaaaaagaaa---cggcatgaatcttgagtacaagtactttctcgggactttcatgtttagaaaagagcaagctagaaacctggaaacatatttgctgag-agataattctcaattggtctcatgcatttct-gtgcctcttgtga--gtagagaggcactag i micMur3.chr14 I 97 C 0 s otoGar3.GL873702 928246 173 - 3201129 -ATAAAAAGCAAATTGG--GGAAAACAAATGGCAGCATGAATCTTGAGTACAAGTACTTTCTCAGGACTTTCATGTTGAGAAAAGAACAAGCTGGAAAACTGGAAAAATATTTCAtgag-agatacttctcaattggtctcacgcatttttggtgcatc---tgc--atagagaggcactag i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44022049 170 - 53741614 gagaaaaagcaagttag--aaaggagaag---tagtaggaatttggagtgccagtactttctcaggccttccagttttagga-agagcaaatgagcaaattggaaatACATTTCttgag-agataattctcaattgacttcttgtatttat-gcgactcttgtga--gtagaaa--cacgag i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1707508 1385 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1644740.000000 s hg38.chr9_KI270719v1_random 28096 135 + 176845 cttcacatttattacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaagatattgtttatttatgaatgagagaacagatttgtttattttcaagtaaaa------cgaagatagtgttt-cct s panTro5.chr4 135052851 136 + 194502333 cttcacatttattacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaagatattgtttatttatggatgggagaacagatttgtttattttcaagtaaaa------tgaagatagtgttttcct i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 10586 136 + 11745 cttcacatttattacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaagatattgtttatttatggatgggagaacagatttgtttattttcaagtaaaa------tgaagatagtgttttcct i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 33413 135 - 70559 cttcacatttattacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaagatattgtttatttatggatgagagaacagatttgtttattttcaagtaaaa------tgaagatagtgttt-cct i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90447006 132 - 115148730 cttcac----attacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaagatattgtttatttatggatgagagaacagatttgtttattttcaagtaaaa------tgaaaatagtgttttcct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131389086 136 + 190429646 cttcacatttactacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaggatattgtttatttatggatgagagaacagatttgcttattttcaagtaaaa------cgaagatagtgttttcct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130908081 136 + 189454096 cttcacatttactacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaggatattgtttatttatggatgagagaacagatttgcttattttcaagtaaaa------cgaagatagtgttttcct i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34899407 136 - 40319822 cttcacatttactacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaggatattgtttatttatggacgagagaacagatttgcttattttcaagtaaaa------cgaagatagtgttttcct i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4453197 136 - 9219162 cttcacatttactacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaggatattgtttatttatggatgagagaacagatttgcttattttcaagtaaaa------cgaagatagtgttttcct i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78978690 136 + 135778131 cttcacatttactacaggttttcctttttaaagatcgttatatagtggatagccctgg-gagatcaggatattgtttatttatggatgagagaacagatttgcttattttcaagtaaaa------cgaagatagtgttttcct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2745054 136 - 3013352 cttcacatttactacaggttttcctttttaaagatctttatatagtggatagccctgg-aagatcaggatattgtttatttatggatgagagaacagatttgcttattttcaagtaaaa------cgaagatagtgttttcct i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5976322 136 + 8656713 cttcacatttactacaggttttcctttttaaagatcttcatatagtggatagctttgg-gagatcaggatatggtttatttatggatgagagaacagatttgcttattttcaagtaaaa------cgaagatattgttttctt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404772 131 - 190850796 cttcccatttcctacaagtttt-ctttttaaagatctctatttagtggatagccttgg-gaaatcaagatagtg----tttatggatgagagaacagatttcctcactttcaagtaaaa------cgaagataatgtttccct i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6488224 131 - 25294431 cttcccatttattacaagtttt-ctttttaaagatctctatatggtggacagccttgg-aaaatcaacacagtg----tttatggatgagagaacagatttccttactttcaagtaaaa------ggaagatagtgtttccgt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044804 135 - 6311556 cttcccatttattacaagtttt-atttttaaagatctctatatagtggacggccttgg-aaaatcaagatagtgtttatttatggatgagagaacagatttccttactttcaagtaaaa------tgaagatagcgtttccct i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899783 132 + 15034901 ctttccatttattacaagtttt-ctttttaaagatctctatatagtgcatagccttggaaaaatcaagatagtg----tttatggatgagagaacagatttccttactttcaagtaaaa------agaagatactgtttccct i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26305595 135 - 93316391 cttcacttttattccaggttgc-ctttttaaagaagtctatttagtggatagctgtgg-aagactgagataatgtttatttatggctgagagaacagatttgcttttttttcagtatga------taaacatagtgtttccct i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 928419 140 - 3201129 ctttgcttttattccagattgt-cttttgaaa-acgcctgtatagtaaatagccttgg-aagactgagaccaggtttatttattgaggaaagcactgatttacttatttttcaatataatatgtgtaaatatagtgtctccct i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44022219 135 - 53741614 ctgcacttctgtcccaacggtctttttttagagatgtctgtatagtggacagccttgg-aagaccaagatagtgtttattgatagaccagagaacagatttgtctattttctgatataa------taaaaatagtatccccT- i canFam3.chr19 C 0 I 7 s dasNov3.JH569232 1708893 129 + 5974691 ctgcccttttgttccaggttgt--attttccagatgactgtataatgagcagc-ttga-aagat----atagtgtttatcaatggagcagaggatagatctgcttattttagaataaaa------tagagataatgtctctct i dasNov3.JH569232 I 1385 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=2513109.000000 s hg38.chr9_KI270719v1_random 28231 224 + 176845 ccacagaaaacatcagacaggtgtgc------tta-----ctgctcatttattaaagatttaagtttcctttacttggagttcttcatctatgacacaaa--ctgtgtgtagcatcaactt---gaactccttgtcatcatctccagtaaactt-----gagggaaaacaggaaccagagcaaagatgaagct-----cgtgcaactctgtgctgtgctgcaaataatggaagt-ctttctgtctctgacc s panTro5.chr4 135052987 224 + 194502333 ccacagaaaacatcagacaggtgtgc------tta-----ctgctcatttactaaagatttaagtttcctttacatggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaactt---gaactccttgtcatcatctccagtaaactt-----gagggaaaacaggaaccagagaaaacatgaagct-----cgtgcaactctgtgctgtgctgcaaataatggaagt-ctttctgtctctgacc i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 10722 224 + 11745 ccacagaaaacatcagacaggtgtgc------tta-----ctgctcatttactaaagatttaagtttcctttacatggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaactt---gaactccttgtcatcatctccagtaaactt-----gagggaaaacaggaaccagagaaaacatgaagct-----cgtgcaactctgtgctgtgctgcaaataatggaagt-ctttctgtctctgacc i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 33548 224 - 70559 ccacagaaaacatcagacaagtgtgc------tta-----ctgctcatttattaaagatttaagtttcctttacttggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaactt---gaactccttgtcatcatctccagtaaactt-----gagggaaaacaggaaccagagcaaagatgaagct-----cgtgcaactctgtgctgtgctgcaaataatggaagt-ctttctgtctctgacc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90447138 223 - 115148730 ccacagaaaacatcagacaggtgtgc------tta-----ctgctcatttgttaaagatttaagtttcccttacttggagtacttcatctgtgacacaaa--ctgtgtgtagcatcaactt---gaactccttgtcattctctccagtaaactt-----gagcgaaaacaggaaccagagcaaacatgaagct-----catgcaactctgtgctgtgctgcaagtaatagaagt-ctttctgtctctgac- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131389222 223 + 190429646 ccacagaaaacatcagacaggtatgc------tta-----ctgctcatttattaaagatttatgttg-cattacttggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaagtt---gaacttcttggcatcatctcctgtaaactt-----gagggaaaataggaaccagagcaaacgtgaagct-----cgtgcaactctgtgctgtgttgcaaataatggaaat-ctttctgtctctgacc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130908217 223 + 189454096 ccacagaaaacatcagacaggtatgc------tta-----ctgctcatttattaaagatttatgttg-ctttacttggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaagtt---gaacttcttggcatcatctccagtaaactt-----gagggaaaataggaaccagagcaaacgtgaagct-----cgtgcaactctgtgctgtgttgcaaataatggaaat-ctttctgtctctgacc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34899543 223 - 40319822 ccacagaaaacatcagacaggtatgc------tta-----ctgctcatttattaaagatttatgttg-ctttacttggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaagtt---gaacttcttggcatcatctccggtaaactt-----gagggaaaataggaaccagagcaaacgtgaagct-----cgtgcaactctgtgctgtgttgcaaataatggaaat-ctttctgtctctgacc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4453333 224 - 9219162 ccacagaaaacatcagacaggtatgc------tta-----ctgctcatttattaaagatttatgttgcctttacttggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaagtt---gaacttcttggcatcatctccggtaaactt-----gagggaaaataggaaccagagcaaacgtgaagct-----cgtgcaactctgtgctgtgctgcaaataatggaagt-ctttctgtctctgacc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78978826 224 + 135778131 ccacagaaaacatcagacaggtatgc------tta-----ctgctcatttattaaagatttatgttgcttttacttggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaagtt---gaacttcttggcatcatctccggtaaactt-----gagggaaaataggaaccagagcaaatgtgaagct-----cgtgcagctctgtgctgtgctgcaaataatggaagt-ctttctgtctctgacc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2745190 224 - 3013352 ccacagaaaacatcagacaggtatgc------tta-----ctgctcatttattaaagatttgtgttgcctttacttggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaagtt---gaacttcttggcatcatctccggtaaactt-----gagggaaaataggaaccagagcaaacgtgaagct-----cgtgcaactctgtgctgtgctgcaaataatggaagt-ctttctgtctctgacc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5976458 224 + 8656713 ccacagaaaatatcagacaggtatgc------tta-----ctgttcatttattaaagatttatgttgcctttacttggagttcttcatctgtgacacaaa--ctgtatgtagcatcaagtt---gaacttcttggcatcatctctggtaaactt-----gaggaaaaataggaaccagagcaaacgtgaagct-----cgtgcaactctgtgctgtgctgtaaataatggaagt-ctttctgtctctgacc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129404903 213 - 190850796 ccacagaaaacatcagacaggtgtctgatgtattaaatatttaatcatttattaaatatttaatttgcctgcacttggagttcttcatttgtgacacaaa--ctgtgtgtagcatcaactt---taactccttggcatcatctccagtaaactt-----gaggaaaaatagaaaccaaggtaaacatgaagct-----cgtgcaactc----------------------aagt-ctttcagtctctaacc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6488355 222 - 25294431 ccacagaaaacatcagacaggtgttt------tta-----ctgttcatgtattaaatatttaagttgcctgtacttggagttcttcatctgtgacacaga--ctgtgtgtagcatcaactt---taactccttggcatcatctccagtaaactt-----gaggaaaaatagaaaccaaagtaaacatgaagct-----cgtgcaactctttgctgtgccgcaaataacggaagt-ctt--agtctctaacc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4044939 224 - 6311556 ccacagaaaacatcagacaggtgtcc------tta-----ctgttcatttattaaatatttaagttgcctgtacttggagttcttcatctgtgacacaat--ctgtgtgtagcatcaactt---caactccttggcattatttccagtaagctt-----gaggaaaaatagaaaccaaaataaacatgaagct-----agtgcaactctttgctgtgccgcaaataacggaagt-cttttagtctctaacc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14899915 224 + 15034901 ccacagaaaacatcagacaggtgtcc------tta-----ctgttcatttattaaatatttaagttgcctgtacttggagttcttcatctgtgacacaaa--ctgtgtgtagcatcaattt---taactccttggcatcatctccagtaaactt-----gaggaaaaacagaaaccaaagtaaacatgaagct-----cgtgcaactctttgctgtgccgcaaataacggaagt-cttttagtctctaacc i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26305730 224 - 93316391 tcatagaaaatataagacaagtgtgc------tta-----ctgctcctttatt-aagatttaagttgcctgtacttggaattcttcagctgtgacattgaacatgtgtgtagcatccactg---aaactccttggcatcatctccgttaaattt-----aaggaaaaagaggaaccaatgcaaacatgaagct-----catgcaactgtgtgctatgcttcaaataataaaagtccct--tgtctccaacc i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 928559 209 - 3201129 cc-ttgacaacaccaggc-agtgtgc------tca-----ccgc-ccattatg-aagatttaagttgcct-taggtgtagttcttcagctgtgacataga------gtgtactatccactg---gaactctttggcatcctctccatcaaactg-----aaggaaaaa---gaatcaatgaaaaaatgaagct-----catgccactttgtgctgggatgaaaataataaacat-cct--tgtctct-gcc i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1709022 231 + 5974691 taattgaaaaaatcagtcacatttgt------gga-----ggtttttttttttaaacatttgcatcccctacatttggggttcatcagttatgacacaa---ctgggtgcacagtacagtcccaggctttccatgtattccctctgg--gacttagagagagagaaaa-aagaaccagtgtgaatctggagctcagggcatgcagctatgtgctatgtggccaataac--aaat-tcctttgtctctgacc i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44022354 7 - 53741614 I a score=2846822.000000 s hg38.chr9_KI270719v1_random 28455 269 + 176845 aaacagttatgtgtcttctgccagcatccataaaactgaagcaggctaacttgtaagctca-------------------gatccttcacagttcttgacaatagtccct-aaaactgtctgcagatgcacatcccttggaaaaattt--tgcatccttttaagaataattaatatcctagtt-aatgacaactATATGACAGGATAGATCACTTTAAGCTTCTACCCAGATTACTATAACTTTTAGGTAAATAATGTATATGCCA-CTTTTTCTAAGGTTATCTAGCCATTT s panTro5.chr4 135053211 270 + 194502333 aaacagttatgtgtcttctgccagcatccataaaactgaagcaggctaacttgtaagctca-------------------gatccttcacagttcttgacaatagtcccttaaaactgtatgcagatgcacatctcttggaaaaattt--tgcatccttttaagaataattaatatcctagtt-aatgacaactATATAACAGGATAGATGACTTTAAGCTTCTACCCAGATTAGTATAACTTTTAGGTAAATAATGTATATGCCA-TTTTTTCTAAGGTTATCTAGCCATTT i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 10946 270 + 11745 aaacagttatgtgtcttctgccagcatccataaaactgaagcaggctaacttgtaagctca-------------------gatccttcacagttcttgacaatagtcccttaaaactgtcggcagatgcacatctcttggaaaaattt--tgcatccttttaagaataattaatatcctagtt-aatgacaactATATAACAGGATAGATGACTTTAAGCTTCTACCCAGATTAGTATAACTTTTAGGTAAATAATGTATATGCCA-TTTTTTCTAAGGTTATCTAGCCATTT i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 33772 269 - 70559 aaacagttatgtgtcttctgccagcatccataaaactgaagcaggctaacttgtaagctca-------------------gatccttcacagttcttgacaatagtcccttaaaactgtctgcagatgcacatcccttggaaaaattt--tgcatccttttaagaataattaatatcctagtt-aatgacaactATATGACAGGATAGATCACTTTAAGCTTCTACCCAGATTACTATAACTTTTAGGT-AATAATGTATATGCCA-TTTTTTCTAAGGTTATCTAGCCATTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90447361 267 - 115148730 ---cagttatgtgtcttctgccagcatccataaaactgaagcaggctaacttgtaagctca-------------------gatccttcacagttcttgacaatagtcccttaaatctgtctgcagatgcacatcccttggaaaAATTA--TGCATCATTTGAAGAATAATTAATATCTTAGTT-AATGACAACTATATGACAGGATAGATCACTATAAGCTTCTTCCCAGATTACTATAACTTTTAGGTAAATAATGTATATGCCA-TTTTTTCTGAGGTTATCTAGCCATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131389445 266 + 190429646 aaagagttacgagtcttctgccaacatccataaaactgaagcaggctaacgtgtaagctta-------------------gatccttcacagttcttgacaatagtcccttaaaactgtctgcagatgcacatcccttggaaaaattttatgcatccTTTTAAGAATAATTAATGTTCTAGTT-AATGACAACTGTATGACAGGATAGATCACTTCAAGCTTCTTCCCAGATTACTATAACTTTT------ATAATGTATATGCCA-TTTTTTCTAAGGTTACCTAGCCATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130908440 272 + 189454096 aaagagttacgagtcttctgccaacatccataaaactgaagcaggctaacgtgtaagctta-------------------gatccttcacagttcttgacaatagtcccttaaaactgtctgcagatgcacatcccttggaaaaattttatgcatccTTTTAAGAATAATTAATGTTCTAGTT-AATGACAACTGTATGACAGGATAGATCACTTCAAGCTTCTTCCCAGATTACTATAACTTTTAGGGAAATAATGTATATGCCA-TTTTTTCTAAGGTTATCTAGCCATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34899766 272 - 40319822 aaagagttacgagtcttctgccaacatccataaaactgaagcaggctaacgtgtaagctta-------------------gatccttcacagttcttgacaatagtcccttaaaactgtctgcagatgcacatcccttggaaaaattttatgcatccTTTTAAGAATAATTAATGTTCTAGTT-AATGACAACTGTATGACAGGATAGATCACTTCAAGCTTCTTCCCAGATTACTATAACTTTTAGGGAAATAATGTATATGCCA-TTTTTTCTAAGGTTATCTAGCCATTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4453557 273 - 9219162 aaagagttacgagtcttctgccaacatccataaaactgaagcaggctaacgtgtaagctta-------------------gatccttcacagttcttgacaatagtcccttaaaactgtctgcagatgcacatcccttggaaaaattttatgcatccTTTTAAGAATAATTAATGTTCTAGTT-AATGGCAACTGTATGACAGGATAGATCACTTCAAGCTTCTTCCCAGATTACTATAACTTTTAGGGAAATAATGTATATGCCATTTTTTTCTAAGGTTATCTAGCCATTT i cerAty1.NW_012000798v1 C 0 C 0 s manLeu1.NW_012103277v1 2745414 272 - 3013352 aaagagttacgagtcttctgccaacatccataaaactgaagcaggctaacgtgtaagctta-------------------gatccttcacagttcttgacaatagtcccttaaaactgtctgcagatgcacattccttggaaaaattttatgcatccTTTTAAGAATAATTAATGTTCTAGTT-AATGACAACTGTATGACAGGATAGATCACTTCAAGCTTCTTCCCAGATTACTATAACTTTTAGGGAAATAATGTATATGCCA-TTTTTTCTAAGGTTATCTAGCCATTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5976682 272 + 8656713 aaagagttacaagtcttctgccaacatccataaaactgaagcaggctaacgtgtaagctta-------------------gatccttcacagttcttgacaatagtcccttaaaactgtctgcagatgcacatcccttggaaaAAATGTATGCATCCTTTTAAGAATAATTAATGTTCTAGTT-AATGACAACTGTATGACAGGATAGATCACTTCAAGCTTCTTCCCAGATTACTATAACTTTTAGGTAAATAATGTATATGCCA-TTTTTTCTAAGGTTATCTAGCCATTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405116 272 - 190850796 aaagagttttgtgtcttctgccagcatccataaaactgaagcaggctaacatgtaggctca-------------------gatcctccacagttcttgacaATAGTCCCTTGAAATTGTCTGCAGATGCACATACCTTGGAAAAATTTTATGCATCTTTTTAAGAATAATTAATATCCTAGTT-AATGACAATTATATGAAAGGATAGATTACTTTAAGCTTCTTCCCAGATTACTATAACTTTTAGAAAAATAATGTATATGCAA-TTTTTTCTAAGGTTATTTAGCCATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6488577 267 - 25294431 aaagatttttgtgtcttctgccagcatccataaaactgaagcaggctaacgtgtaagctca-------------------gatccttcacagttcttgacaATAGTCCCTTGAAATTGTCTGGAGATTCATATACCTTGGAAAATTTTTATGCATCTTTTTAAGAATAATTAATATCCTAGTT-AATGACAATTACATGAAAGGATAGA-----TTAAGCTTCTTCCCAGATTACTATAACTTTTAGATAAATAATGTATATGCAT-TTTTTTCTAAGGTTATTTAGCCATTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4045163 272 - 6311556 aaagagttttgtatcttctgccagcatccataaaactgaagcaggctaacgtgtaagcttg-------------------gatccttcacagttcttgaAAATAACCCCTTGAAATTGTCTGCAGATGCACATACCTTGGAAAAATTTTATGCATCTTTTAAAGAATAATTAATATCCTAGTT-AATGACAATTATATGAAAGGATAGATTACTTTAAGCTTCTTCCCAGATTACTATAACTTTTAGATAAATAATGTATATGCAA-TTTTTTCAAAGGTTATTTAGCCATTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14900139 272 + 15034901 aaagagttttgtgtcttctgccagcatccataaaactgaagcaggctaacgtgtaagctca-------------------gatacttcatagttctagacaATAGTCCCTTGAAATTGTCTGCAGATGCACATACCTTGGAAAAATTCTATGCATCTTTTTAAGAATAATTAATATCCTAGCT-AATGACAATTATATGAAAGGATAGATTACTTTAAGCTTCTTCCCAGATTACTATAACTTTTAGATAAATAATGTATATGCAA-TTTTTTCTAAGGTTATTTAGACATTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26305954 265 - 93316391 aaggagttatgtgtcttctgccagtaactacaaaactgaggcaggtgaacttgtcagctca-------------------gatccttcacagttcttgacaatattctcttaaaac-atctgtgggtccactccttatggaaaaatta--tgtacccttttaaagatgcttaatatctcagttAAATGACAGCTATTT-----TATAGATCATTTTAAGCTTCTTCCCAGATAACCATAACTTTTAGGTAAATAAGGTATATGCAA-GTTTCCCTAAGGATATCTAGTCATTT i micMur3.chr14 C 0 I 1233 s otoGar3.GL873702 928768 257 - 3201129 aaggtattatgtgtcttctgctagcaactatgaaactgaggcaggtaaa--------ctCA-------------------AATCCTTCTGATTTCTTGACAATACTCTCTTAGGAG-ATCTGTGGATGCGCTCTGTATGTAAAAATTA--TATACCCTTTTAATGATGCTTAATATCTCAGTTAAATGATGACTATTT-----GATAGATCGCTTTAAATTTCTTTCCCGATCACCATAACTTTTAGGTAAATAATATATTTGCAA-GTTTCCTGAAGGCAATCTAGCCTTTC i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1709253 275 + 5974691 ctggagtaat--atcttctgccagcatctatgaaactgaatcagtctaacttgttagcatacaagtaaggtatagccaatgattctttactgtttttA------------TAAAACTGTCTATGAGTATATATCCCTTAGAAAGACTG--GGTGTACTTTGAAAAAATTACAATATCCCAGCTAAATAACAGCAAGCTAAAAGGGTAGATGACTTTAGGCTTCCCTGCAGATCACTAAAATTTTTAGATAAATAAGGAACATGCAA-TTTTTACTAA-GCTATTTAGCCATTT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44022354 7 - 53741614 I e chlSab2.chr7 78979050 0 + 135778131 C a score=65660.000000 s hg38.chr9_KI270719v1_random 28724 10 + 176845 TCGATGTAGA s panTro5.chr4 135053481 10 + 194502333 TTGATGTGGA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 11216 10 + 11745 TTGATGTGGA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 34041 10 - 70559 TCGATGTAGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90447628 10 - 115148730 TCAATATGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131389711 10 + 190429646 TCAGTATGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130908712 10 + 189454096 TCAGTATGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900038 10 - 40319822 TCAGTATGGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4453830 10 - 9219162 TCAGTATGGA i cerAty1.NW_012000798v1 C 0 C 0 s manLeu1.NW_012103277v1 2745686 10 - 3013352 TCAGTATGGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5976954 10 + 8656713 TCAATATGGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405388 9 - 190850796 TTGATAT-AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6488844 10 - 25294431 TTTATATGGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4045435 10 - 6311556 TTGATATGGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14900411 10 + 15034901 TTGATATGGA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 929025 10 - 3201129 CCTATATGGA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1709528 10 + 5974691 TCTAAACAAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44022354 7 - 53741614 I e chlSab2.chr7 78979050 0 + 135778131 C a score=2789940.000000 s hg38.chr9_KI270719v1_random 28734 266 + 176845 AAACAATATTGTGTAAGATAAGCTGAGCATATTTTTCACTTCGTTTTTGTTTTGCAAAACAATTTTATTGGTTTTGTTAATGCCCCAATCATCAGTACTGCTTGGTATAAGAGCCGAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGTTCAGTTATTTCAAATTAGTAGACAGAATTG-AGAGATGGAAAATTTTAGAAAAATCTTGGTTAATCATA------------CTTGGAA----------TTTGGTTATGTAATATCTCTTTCTCTTTTGGGGAATACA s panTro5.chr4 135053491 266 + 194502333 AAACAATATTGTGTAAGATAAGCTGAGCTTATTTTTCACTTCGTTTTTGTTTTGCAAAACAATTTTATTGCTTTTGTTAATGCCCCAATCATCAATACTGCTTGGCATAAGAGCCGAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATTAGTAGACAGAATTG-AGAGGTGGAAAATTTTAGAAAAATCTTGGTTAATCATA------------CTTGGAA----------TTTGGTTATGTAATATCTCTTTCCCTTTTGGGGAATACA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 11226 266 + 11745 AAACAATATTGTGTAAGATAAGCTGAGCTTATTTTTCACTTCGTTTTTGTTTTGCAAAACAATTTTATTGCTTTTGTTAATGCCCCAATCATCAATACTGCTTGGCATAAGAGCCGAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATTAGTAGACAGAATTG-AGAGGTGGAAAATTTTAGAAAAATCTTGGTTAATCATA------------CTTGGAA----------TTTGGTTATGTAATATCTCTTTCCCTTTTGGGGAATACA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 34051 265 - 70559 AAACAATATTGTGTAAGATAAGCTGAGCATATTTTTCACTTCGTTTTTGTTTTGCAAAACAATTTTATTGGTTTTGTTAATGCCCCAATCATCAGTACTGCTTGGTATAAGAGCCGAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATTAGTAGACAGAATTG-AGAGGTGGAAAATTTTAGAAAAATCTTGGTTAATCATA------------CTTGGAA----------TTTGGTTATGTAATATCTCTTTCTC-TTTGGGGAATACA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90447638 266 - 115148730 AAACAATATTGTATAAGATAAGCTGAGCACATTTTTCACTTCATTTTTGTTTTGCAAAACAATTTTATTGCTTTTGTTAATGCCCCAATCATCAATACTGCTTAGCATAAGAGCTGAGTTTGAAGAATTATCATGTTGCAAATGTGTTTTGTTCATTTATTTCAAATTAGTAGATAGAATTG-AGAGGTGGAAAATTTTAGAAAAATCTTAGTTAATCATA------------CTTGGAA----------TTTGGTTATGTAGTATCTTTTTCTCTTTTGGGGAATACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131389721 253 + 190429646 AAACAATATTATGTAAGATAAACTGAGCACATTTTTCACTTCGTTTTTGTTTTTCAAAACAATTTTATTGCTTTTATTAATGCCTCAGTCATCAATACTGCTTGGCATAAGAGCCAAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATTAGTAGACAGAATTG-AGAGGTGGAAAATTATAGAAAAATCTCAGTTGATCATA------------CTTGGAA----------TTTGGTTATGTAATA-------------TGGGGAATACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130908722 253 + 189454096 AAACAATATTATGTAAGATAAACTGAGCACATTTTTCACTTCGTTTTTGTTTTTCAAAACAATTTTATTGCTTTTATTAATGCCTCAGTCATCAATACTGCTTGGCATAAGAGCCAAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATTAGTAGACAGAATTG-AGAGGTGGAAAATTATAGAAAAATCTCAGTTGATCATA------------CTTGGAA----------TTTGGTTATGTAATA-------------TGGGGAACACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900048 253 - 40319822 AAACAATATTATGTAAGATAAACTGAGCACATTTTTCACTTCGTTTTTGTTTTTCAAAACAATTTTATTGCTTTTATTAATGCCTCAGTCATCAATACTGCTTGGCATAAGAGCCAAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATTAGTAGACAGAATTG-AGAGGTGGAAAATTATAGAAAAATCTCAGTTGATCATA------------CTTGGAA----------TTTGGTTATGTAATA-------------CGGGGAATACA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4453840 253 - 9219162 AAACAATATTATGTAAGATAAACTGAGCACATTTTTCACTTCGTTTTTGTTTTTCAAAACAATTTTATTGCTTTTGTTAATGCCTCAGTCATCAATACTGCTTGGCATAAGAGCCAAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATCAGTAGACAGAATTG-AGAGGTGGAAAATTATAGAAAAATCTCAGTTGACCATA------------CTTGGAA----------TTTGGTTATGTAATA-------------TGGGGAATACA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979050 253 + 135778131 aaacaatatcgtgtAAGATAAACTGAGCACATTTTTCACTTCGTTTTTGTTTTTCAAAACAATTTTATTGCTTTTGTTAATGCCTTAGTCATCAATACTGCTTGACGTAAGAGCCAAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATAAGTAGACAGAATTG-AGAGGTGGAAAATTTTAGAAAAATCTCAGTTGATCATA------------CTTGGAA----------TTTGGTTATGTAATA-------------TGGGGAATACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2745696 253 - 3013352 AAACAATATTATGTAAGATAAACTGAGCACATTTTTCACTTCGTTTTTGTTTTTCAAAACAATTTTATTGCTTTTGTTAATGCCTCAGTCATCAATACTGCTTGGCATAAGAGCCAAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATTAGTAGACAGAATTG-AGAGGTGGAAAATTATAGAAAAATCTCAGTTGATCATA------------CTTGGAA----------TTTGGTTATGTAATA-------------TGGGGAATACA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5976964 251 + 8656713 AAACAATATTGTGTAAGATAAACTGAGCACATTTTTCA--TTGTTTTTGTTTTTCAAAACAATTTTATTGCTTTTGTTAATGCCTCAGTCATCAATACTGCTTGGCATAATAGCCAAGTTTGAAGAATTATCATGTTGCAAATGTATTTTGCTCATTTATTTCAAATTAGTAGACAGAATTG-AGAGGTGGAAAATTTTAGAAAAATCTCAGTTGATCATA------------CTTGGAA----------TTTGGTTATGTAATA-------------TGGGAAATACA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405397 267 - 190850796 AAACAATATTGTATAAGAGAAGCTGGGAACATTTTTCACTCCATTTTTGTTCTTCAAAACAATTTTATTGCTTTTGTAAACGCCCCAATCATCCATACTGCTTGGCATAAGAGGCAAGTTTGAAGAATTATCATGTTAAAAATGTATTTTGATCATTTATTACAAATTAGTAGAAAAAACTGAAAAGGTGGAAAATTTTAGAAAAATCACGATTAATCATA------------CTTGGAA----------TTTGGTTATGTGATATCTCTTTATCTTTTGAAGAATACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6488854 266 - 25294431 AAACAATATTGTATAGGAGAAGCTGGGCACATTTTGCACTCCATTTTTGTTCTTCAAAATAATTTTATTGCTTTTGTAAATGCCCCAATCATCAATACTACTTGGCATAAGAGGGAAGTTTGAAGAATTATCATGTTGAAAATGTATTTTGCTCATTTATTACAAATTAGTAGAAAGAATTG-AAAGGTGGAAATTTTTTAAAAAATCTCGATGAATCATA------------CTTGGAA----------TTTGGTTATGTGATATTTCTTTATCTTTTGAAGAATACA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4045445 266 - 6311556 AAACAATATTGTATAAGAGAAGCTGGGCACATTTTGCACTCCATTTTTGTTCTTCAAAACAATGTTATTGCTTTTGTAAATGCCCCAATCATCAATACTGCTTGGCATAAGAGGCAAGTTTGAAGAATTATCATATTGAAAATGTACTTTACTCATTTATTACAAATTAGTAGAAAGAATTA-AAAGGTGGAAAATTTTAGAAAAATCTCCATTAATCATA------------CTTGGAA----------TTTGGTTATGTGATATTTCTTTATCTTTTGAAGAATACA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14900421 265 + 15034901 AAATAATATTGTATAAGAGAAGCTGGGCACATTTTTCACTCCATTTTTGTTCTTCAAAACAATTTTACTGCTTTTGTAAATGCCCCAATCATCAATACTGCTTGGCATAAGAGGCAAGTTTGAAGAATTATCATGTTGAAAATGTATTTTGCTCATTTATTACAAATTAGTAGAAAAAACTG-AAAGGTGGAAAA-TTTAGAAAAATCTCGATTAATCATA------------CTTGGAA----------TTTGGTTATGTGATATTTCTTTATCCTTTGAAGAATACA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 929035 286 - 3201129 TAAGAAAATCACATAAGATAAACCAACCACAAGTTTTAATTCACTGTTATTTTTCAAAATAATTTTGTTACTTGGGTAAATGTCCCAGTCATCAATATTGCCTTG-ATAAGAGCCAAGTTTAAAGAATTATCATGTCCTAAATGCCTTTTCCCCATTCATTACAGGTTAGTAGGAAGAATTG-A-AGGTGGATAATTTTAGAATAGTCTTAGTAAAACCCATTCCATTCCTATTTTGGAAGATGTCCAACTTTTTTTTTTTAACATTTGTTTCTCTGCTAGAGAAAACA i otoGar3.GL873702 C 0 I 342 s dasNov3.JH569232 1709538 260 + 5974691 ATAGAAAATCATGTAAGATAAGCCAAGCACAATTATCTGTTGACTTTTATT---CAAAATAATTTTATCACTTTTGTAAATGTCCCAATCAACAGTACTACCTCTGATAACAGCTAAGTTTAAAGAATTATCATAACTTAAATGCAAATTTTCCATTCATCATAAATTAGTAGGGAGAATTG-CGAAGTGGAATATTCTAGAACAATGTTGAATAATCCTA------------ATTAGAA----------TTTAGTAATGTGACATTTATTTTCT---TTGAGAATATG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44022354 7 - 53741614 I a score=266554.000000 s hg38.chr9_KI270719v1_random 29000 27 + 176845 AAGGTTCATAAACTAGTGATAA----TCTTC s panTro5.chr4 135053757 27 + 194502333 AAGGTTCATAAACTAGTGATAA----TCTTC i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 11492 27 + 11745 AAGGTTCATAAACTAGTGATAA----TCTTC i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 34316 27 - 70559 AAGGTTCATAAACTAGTGATAA----TCTTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90447904 27 - 115148730 AAGATTGATAAACTAGTGATAA----TCTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131389974 27 + 190429646 AAGGTTGATATACTAGTGATAA----TATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130908975 27 + 189454096 AAGGTTGATATACTAGTGATAA----TATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900301 27 - 40319822 AAGGTTGATATACTAGTGATAA----TATTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454093 27 - 9219162 AAGGTTGATATACTAGTGATAA----TATTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979303 27 + 135778131 AAGGTTGATATACTAGTGATAA----TATTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2745949 27 - 3013352 AAGGTTGATATACTAGTGATAA----TATTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977215 27 + 8656713 AAGGTTGATATACTAGTGATAA----TATTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405664 27 - 190850796 AAGGTTGATAAACTAGTGATAA----TCTTC i calJac3.chr3 C 0 I 12 s saiBol1.JH378129 6489120 27 - 25294431 AAGGTTGATAAACTGGTGATAA----TCTTC i saiBol1.JH378129 C 0 I 11 s cebCap1.NW_016107420v1 4045711 27 - 6311556 AGTGTTGGTAAACTAGTGATAA----TCTTC i cebCap1.NW_016107420v1 C 0 I 16 s aotNan1.NW_018507635v1 14900686 27 + 15034901 AAGGTTGATAAACTTGTGATAA----TCTTC i aotNan1.NW_018507635v1 C 0 I 16 s dasNov3.JH569232 1709798 31 + 5974691 CAGGTTCACAAATTATTGATAAATATTCTTC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44022354 7 - 53741614 I e otoGar3.GL873702 929321 342 - 3201129 I a score=148819.000000 s hg38.chr9_KI270719v1_random 29027 25 + 176845 ACTCTTGGAACCATTAGATGCTATC- s panTro5.chr4 135053784 25 + 194502333 ACTCTTGGAACCATTAGATGCTATC- i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 11519 25 + 11745 ACTCTTGGAACCATTAGATGCTATC- i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 34343 25 - 70559 ACTCTTGGAACCATTAGATGCTATC- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90447931 25 - 115148730 ACTCTTGGAGCCATTAGATGCTCTC- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390001 25 + 190429646 ACTCTTGGAACCATTAGATGCTATC- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909002 25 + 189454096 ACTCTTGGAACCATTAGATGCTATC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900328 25 - 40319822 ACTCTTGGAACCATTAGATGCTATC- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454120 25 - 9219162 ACTCTTGGAACCATTAGATGCTATC- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979330 25 + 135778131 ACTCTTGGAACCATTAGATGCTATC- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2745976 25 - 3013352 ACTCTTGGAACCATTAGATGCTATC- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977242 25 + 8656713 GCTCTTGGAACCATTAGATGCTTTC- i colAng1.NW_012114544v1 C 0 C 0 s dasNov3.JH569232 1709829 26 + 5974691 CTTATCTGAGCCATTAAAGGACACTG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44022354 7 - 53741614 I e otoGar3.GL873702 929321 342 - 3201129 I e aotNan1.NW_018507635v1 14900713 16 + 15034901 I e cebCap1.NW_016107420v1 4045738 16 - 6311556 I e saiBol1.JH378129 6489147 11 - 25294431 I e calJac3.chr3 129405691 12 - 190850796 I a score=454487.000000 s hg38.chr9_KI270719v1_random 29052 70 + 176845 ATGATGTTAGCATAGAAGATAAATTTATAA-GTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA s panTro5.chr4 135053809 71 + 194502333 ATTATGTTAGCACAGAAGATAAATTTATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 11544 71 + 11745 ATGATGTTAGCACAGAAGATAAATTTATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i panPan2.chrUn_NW_014014795v1 C 0 C 0 s gorGor5.CYUI01001450v1 34368 71 - 70559 ATGATGTTAGCACAGAAGATAAATTTATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90447956 71 - 115148730 ATGATGTTAGCACAGAAGAGAAATTTATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390026 71 + 190429646 ATGACATTAACACAGAAGACAAATTCATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909027 71 + 189454096 ATGACATTAACACAGAAGACAAATTCATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900353 71 - 40319822 ATGACATTAACACAGAAGACAAATTCATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454145 71 - 9219162 ATGACATTAGCACAGAAGACAAATTCATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979355 71 + 135778131 ATGATGTTAGCACAGAAGACAAATTCATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746001 71 - 3013352 ATGACATTAGCACAGAAGACAAATTCATAATGTTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977267 71 + 8656713 ATGATATTAGCACGGAAGACAAATTCATAATGGTGCAGTGAGGTAAGGAAATAAAACA-TGTAAGTCTTTGA i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44022361 68 - 53741614 ATGATG--AGTACATGAGATAAATTACAAACGTTGCAATAAGTTAAAAAAATGAAAGA--ATATGTCTTTGA i canFam3.chr19 I 7 C 0 s dasNov3.JH569232 1709855 72 + 5974691 ATGATTGCAATTCATGAGGTAAATTGCAAATCTTGCAGGAAGGAAAAGGCATGGAAGAATGTAAGAATTTGA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929321 342 - 3201129 I e aotNan1.NW_018507635v1 14900713 16 + 15034901 I e cebCap1.NW_016107420v1 4045738 16 - 6311556 I e saiBol1.JH378129 6489147 11 - 25294431 I e calJac3.chr3 129405691 12 - 190850796 I a score=734112.000000 s hg38.chr9_KI270719v1_random 29122 130 + 176845 AAACAACACTATGACAGTCCTTGCAGGCTAAAACTTAGACA---CCAAAGCA-TTTT---TTGTTACTTTTGGAGAATAAAAGAAGTGTGTCCCTCA---ATGTCTTGT----GGGAG-AAAATATATAGTTTGATACAATTGTC s panTro5.chr4 135053880 130 + 194502333 AAACAACACTATGAGAGCCCTTGCAGGCTAAAAATTAGACA---CCAAAGCA-TTTT---TTGTTACTTTTGGAGAATAAAAGAAGTGTGCCCCTCA---ATGTCTTGT----GGGAG-AAAATATATAGTTTGATACACTTGTC i panTro5.chr4 C 0 C 0 s panPan2.chrUn_NW_014014795v1 11615 130 + 11745 AAACAACACTATGAGAGCCCTTGCAGGCTAAAAATTAGACA---CCAAAGCA-TTTT---TTGTTACTTTTGGAGAATAAAAGAAGTGTGCCCCTCA---ATGTCTTGT----GGGAG-AAAATATATAGTTTGATACACTTGTC i panPan2.chrUn_NW_014014795v1 C 0 N 0 s gorGor5.CYUI01001450v1 34439 130 - 70559 AAACAACACTATGAGAGACCTTGCAGGCTAAAAATTAGACA---CCAAAGCA-TTTT---TTGTTACTTTTGGAGAATAAAAGAAATGTGCCCCTCA---ATGTCTTGT----GGGAG-AAAATATATAGTTTGATACACTTGTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448027 131 - 115148730 AAACAGCACTATGGGAGCCCTTGCAGGCTAAAAATTAGACA---CCAAAGCA-TTTT---TTGTTACTTTTGGAGAATAAAAGAAGTGTGCCCCTCA---ATGTCTTGT----GGGAGAAAAATATATAGTTTGATACACTTGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390097 131 + 190429646 AAACCACACTATGAGAGCCCTTGCAGGCTGAAAATTAGACG---CTAAAGTATTTTT---TTGTTCCTTTTGGAGAATAAAAGAAGCGTGCTCCTCA---ATGTCTTGT----TGAGA-AAAATATATAGTTTGATACACTTGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909098 131 + 189454096 AAACCACACTATGAGAGCCCTTGCAGGCTGAAAATTAGACG---CTAAAGTATTTTT---TTGTTCCTTTTGGAGAATAAAAGAAGCGTGCTCCTTA---ATGTCTTGT----TGAGA-AAAATATATAGTTTGATACACTTGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900424 131 - 40319822 AAACCACACTATGAGAGCCCTTGCAGGCTGAAAATTAGACG---CTAAAGTATTTTT---TTGTTCCTTTTGGAGAATAAAAGAAGCGTGCTCCTCA---ATGTCTTGT----TGAGA-AAAATATATAGTTTGATACACTTGTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454216 131 - 9219162 AAACCACACTATGAGAGCCCTTGCAGGCTGAAAATTAGACG---CTAAAGTATTTTT---TTGTTCCTTTTGGAGAATAAGAGAAGCGTGCTCCTCA---ATGTCTTGT----TGAGA-AAAATATATAGTTTGATACACTTGTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979426 130 + 135778131 AAACCACACTATGAGAGCCCTTGCAGGCTGAATATTAGATG---CTAAAGTA-TTTT---TTGTTCCTTTTGGAGAATAAAAGAAGCGTGCTCCTCA---ATGTCTTGT----TGAGA-AAAATATATAGTTTGATACACTTGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746072 131 - 3013352 AAACCACACTATGTGAGCCCTTGCAGGCTGAAAATCAGACG---CTAAAGTATTTTT---TTGTTCCTTTTGGAGAATAAGAGAAGCGTGCTCCTCA---ATGTCTTGT----TGAGA-AAAATATATAGTTTGATACACTTGTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977338 130 + 8656713 AAACCACACTATGAGAGCCCTTGCAGGCTGAAAATTAGATG---CTAAAGCA-TTTT---TTGTTCCTTTTGGAGAATAAAAGAAGCGTGCTCCTCA---ATGTCTTGT----TGAGA-AAAATATATAGTTTGACACACTTGTC i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44022429 133 - 53741614 AAATA-----CTGATAGGCTTCTCAAGCTGCAAATTAGATAAACCAGAAATA-TTTTATCCTACTCCTTTTGGTGAAT-----AAGTCTGTCCATCAATTATAACTTGTAGGAGGAAA-AAAATGTATAGTTTGATATACTTGCC i canFam3.chr19 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929321 342 - 3201129 I e aotNan1.NW_018507635v1 14900713 16 + 15034901 I e cebCap1.NW_016107420v1 4045738 16 - 6311556 I e saiBol1.JH378129 6489147 11 - 25294431 I e calJac3.chr3 129405691 12 - 190850796 I a score=236446.000000 s hg38.chr9_KI270719v1_random 29252 50 + 176845 AATATCTCTAAC--------------------------------------TCAAAAATGATGAGTATAAGGAGTGACCCTTATTGTAG s panTro5.chr4 135054010 50 + 194502333 AATATCTCTAAC--------------------------------------TCAAAAATGATGAGTATAAGGAGTGACCCTTATTGTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 34569 48 - 70559 AATATCTCTAAC--------------------------------------TC-AAAATGATGAGTATAAGGAGTGACCCTTATTGT-G i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448158 50 - 115148730 AATATCTCTAAC--------------------------------------TCAAAAATGATGAGTATAAGGAGTGACCCTTATTGTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390228 50 + 190429646 AATATTGCTAAC--------------------------------------TCAAAAATGATGAGTATAAGGAGTGACCCTTATTGTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909229 50 + 189454096 AATATTGCTAAC--------------------------------------TCAAAAATGATGAATATAAGGAGTGACCCTTATTGTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900555 50 - 40319822 AATATTGCTAAC--------------------------------------TCAAAAATGATGAGTATAAGGAGTGACCATTATTGTAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454347 50 - 9219162 AATATTGCTAAC--------------------------------------TCAAAAATGATGAGTATAAGGAGTGACCCTTATTGTAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979556 50 + 135778131 AATATTGCTAAT--------------------------------------TCAAAAATGATGAGTATAAGGAGTGACCCTTATTGTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746203 50 - 3013352 AATATTGCTAAC--------------------------------------TCAAAAATGATGAGTATAAGGAGTGACCCTTATTGTAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977468 50 + 8656713 AACATTGCTAAC--------------------------------------TCAAAAATGATGAGTATAAGGAGTGACCCTTATTGTAG i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44022562 88 - 53741614 AACATCTCTTACACAAGAAAGGTTAttcttttttttttttttttttttttttAAGAAAGGTTATTCTAAAAGGTGACCATTAATGCAG i canFam3.chr19 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929321 342 - 3201129 I e aotNan1.NW_018507635v1 14900713 16 + 15034901 I e cebCap1.NW_016107420v1 4045738 16 - 6311556 I e saiBol1.JH378129 6489147 11 - 25294431 I e calJac3.chr3 129405691 12 - 190850796 I a score=10768.000000 s hg38.chr9_KI270719v1_random 29302 2 + 176845 TC s panTro5.chr4 135054060 2 + 194502333 TC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 34617 2 - 70559 TC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448208 2 - 115148730 TC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390278 2 + 190429646 TC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909279 2 + 189454096 TC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900605 2 - 40319822 TC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454397 2 - 9219162 TC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979606 2 + 135778131 TC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746253 2 - 3013352 TC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977518 2 + 8656713 TC i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6489158 2 - 25294431 TT i saiBol1.JH378129 I 11 C 0 s canFam3.chr19 44022650 2 - 53741614 TG i canFam3.chr19 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929321 342 - 3201129 I e aotNan1.NW_018507635v1 14900713 16 + 15034901 I e cebCap1.NW_016107420v1 4045738 16 - 6311556 I e calJac3.chr3 129405691 12 - 190850796 I a score=19258.000000 s hg38.chr9_KI270719v1_random 29304 3 + 176845 TTA s panTro5.chr4 135054062 3 + 194502333 TTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 34619 3 - 70559 TTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448210 3 - 115148730 TTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390280 3 + 190429646 TTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909281 3 + 189454096 TTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900607 3 - 40319822 TTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454399 3 - 9219162 TTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979608 3 + 135778131 TTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746255 3 - 3013352 TTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977520 3 + 8656713 TTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405703 3 - 190850796 TTG i calJac3.chr3 I 12 C 0 s saiBol1.JH378129 6489160 3 - 25294431 TTG i saiBol1.JH378129 C 0 C 0 s canFam3.chr19 44022652 3 - 53741614 TCG i canFam3.chr19 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929321 342 - 3201129 I e aotNan1.NW_018507635v1 14900713 16 + 15034901 I e cebCap1.NW_016107420v1 4045738 16 - 6311556 I a score=180040.000000 s hg38.chr9_KI270719v1_random 29307 18 + 176845 TATTTCTCTCCAACAATT s panTro5.chr4 135054065 18 + 194502333 TATTTCTCTCCAACAATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 34622 18 - 70559 TATTTCTCTCCAACAATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448213 18 - 115148730 TATTTCTCTCCAACAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390283 18 + 190429646 TATTTCTCTCCAACAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909284 18 + 189454096 TATTTCTCTCCAACAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900610 18 - 40319822 TATTTCTCTCCAACAATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454402 18 - 9219162 TATTTCTCTCCAACAATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979611 18 + 135778131 TATTTCTCTCCAACAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746258 18 - 3013352 TATTTCCCTCCAGCAATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977523 18 + 8656713 TATTTCTCTCCAACAATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405706 18 - 190850796 TATTCCTCTCCAACAATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489163 18 - 25294431 TATTTCTCTCCAACAATC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4045754 18 - 6311556 TATTTCTCTCCAACAATC i cebCap1.NW_016107420v1 I 16 C 0 s aotNan1.NW_018507635v1 14900729 18 + 15034901 TATTTCTCTCCAACAATC i aotNan1.NW_018507635v1 I 16 C 0 s canFam3.chr19 44022655 18 - 53741614 TGGGTCTCTCCAACAGTC i canFam3.chr19 C 0 I 197 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929321 342 - 3201129 I a score=1266617.000000 s hg38.chr9_KI270719v1_random 29325 151 + 176845 AAGAGAGTTGGTGGGGATGTTTTT-TC--CATGAGTTCATCCCGGGCCCCAGGAGATTTTCATCTTGTATTCTCTTTATAATCCTATCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGAC-AGTAAAATGTGTAAG s panTro5.chr4 135054083 153 + 194502333 AAGAGAGTTGGTGGGGATGTTTTT-TTGTCATGAGTTCATCCCGGGCCCCAGGAGATTTTCATCTTGTATTCTCTTTATAATCCTATCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGCC-AGTAAAATGTGTAAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 34640 151 - 70559 AAGAGAGTTGGTGGGGATGTTTTT-TC--CATGAGTTCATCCCGGGCCCCAGGAGATTTTCATCTTGTATTCTCTTTATAATCCTATCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGAC-AGTAAAATGTGTAAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448231 151 - 115148730 AAGAGAGTTGGTGGGGATGTTTTT-TC--TATGAGTTCACCCAGGGTCCCAGGAGATTTTCATCTTGT-TTCTCTTCGTAATCCTATCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGCCGGGGGAAATGTGTAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390301 151 + 190429646 AAGAGAGTTGGTGGGGCTATTTTTATC--CATGAGTTCACCCCGGGT-CCAGGTGATTTTCATCTTGT-TTCTCTTCATAATCCTGTCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGCCAGGGGAAATGTGTAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909302 151 + 189454096 AAGAGAGTTGGTGGGGCTATTTTTATC--CATGAGTTCACCCCGGGT-CCAGGTGATTTTCATCTTGT-TTCTCTTCATAATCCTATCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGCCAGGGGAAATGTGTAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900628 151 - 40319822 AAGAGAGTTGGTGGGGCTATTTTTATC--CATGAGTTCACCCCGGGT-CCAGGTGATTTTCATCTTGT-TTCTCTTCATAATCCTATCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGCCAGGGGAAATGTGTAAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454420 152 - 9219162 AAGAGAGTTGGTGGGGCTATTTTTATC--CATGAGTTCACCCCGGGTCCCAGGTGATTTTCATCTTGT-TTCTCTTCATAATCCTATCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGCCAGGGGCAATGTGTAAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979629 152 + 135778131 AAGAGAGTTGGTGGGGCTACTTTTATC--CGTGAGTTCACCCCGGGTCCCAGGTGATTTTCATCGTGT-TTCTCTTCATAATCCTATCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGCCAGGGGAAATGTGTAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746276 152 - 3013352 AACAGAGTTGGTGGGGCTATTTTTATC--CATGAGTTCACCCCgggtcccaggtgattttcatcttgt-ttctcttcataatcctatcttagtgtttccttctcatggcta-----agttcagcaatacttctgcattccagccaggggaaatgcgtaag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977541 152 + 8656713 AAGAGAGTTGGTGGGGCTATTTTTATC--CATGAGTTCACCCTGGGTCCCAGGTGATTTTCATCTTGT-TTCTCTTCATAATCCTATCTTAGTGTTTCATCCTCATGGCTA-----AGTTCAGCAATACTTCTGCATTCCAGCCAGGGGAAATGTGTAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405724 155 - 190850796 AAGAGAGTTGGTAAGGATGGTCTTTTT--CATGAGTTCACCCTGGGTCCCGGGTGATTTGCATC--GT-TTCTCTTCATAATCCTGTATTAGTGTTTCATTCTCATGGCTGAGGGTAGTTCAGCAATACTTCTGCGTTTCAGCCAAGGAAAATGTGTGAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489181 157 - 25294431 AAGAGAGTTGGTAAGGATGGTCTTTTC--CACGAGTTTGCCCTGGGTCCCAGGTGATTTTCTTCTTGT-TTCTCTTTGTAATCCTATATTAGTGTTTCATTCTCATGGTTGAGGGTAGTTCAGCAATACTTCTGCATTTCAGCCAAGGGAAATGTGTAAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4045772 157 - 6311556 AAGAGAGTTGATAAGTGTGGTCTTTTC--CATGAGTTCACCCTGGGTCCCAGGCGATTTTCATCTTGT-TTCTCTCCATAATCCTATATTAATGTTTCATTCTCATGGTTGAGTGTAGTCCAGCAATACTTCTGCATTTCAGCCAAGGGAAATGTGTAAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14900747 157 + 15034901 AAGAGAGTTGGTAAGGATGGTCTTTTC--CATGAGTTCACCCTGGGTCCCAGGTGATTTTCATCTTGT-TTCTCTTCATAATCCTATATTAGTGTTTCATTCTCATGGCTGAGCGTAGTTCAGCAATACTTCTGCATTTCAGCCAAGGGAAATGTGTAAC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44022870 141 - 53741614 aaaaGAGTGGGTGGATATAGTCTT-TC--CG-GAGTTCATTCTGGGCCCTAGGTTGCTTCAATCTTGT----TCTTTATAATTCTATCTTA--GTTTCATCCTTATGATTAAAGGTAGCTTTGCAACACTCCTGAATTCCAGCCAGGGAAA--------- i canFam3.chr19 I 197 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929321 342 - 3201129 I a score=146876.000000 s hg38.chr9_KI270719v1_random 29476 19 + 176845 AAGAGATGTAAAAACAATC s panTro5.chr4 135054236 19 + 194502333 AAGAGATGTAAAAACAATC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 34791 19 - 70559 AAGAGATGTAAAAACAATC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448382 19 - 115148730 AAGAGATGTAAAAACAATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390452 18 + 190429646 AAGAGATG-AAAAACAATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909453 18 + 189454096 AAGAGATG-AAAAACAATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900779 18 - 40319822 AAGAGATG-AAAAACAATC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454572 18 - 9219162 AAGAGATG-AAAAACAATC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979781 18 + 135778131 AAGAGATG-AAAAACAATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746428 18 - 3013352 aagagatg-aaaaacaATC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977693 18 + 8656713 AAGAGATG-AAAAACAATC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405879 18 - 190850796 AAGAGATG-TAAAACAGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489338 18 - 25294431 AGGAGATG-TAAAGCAGTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4045929 18 - 6311556 AGGAGATG-TAAAACAGTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14900904 16 + 15034901 --GAGATA-TAAAACAGTC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 929663 19 - 3201129 aatagatttaaaaatCATC i otoGar3.GL873702 I 342 C 0 s canFam3.chr19 44023011 19 - 53741614 AAAAAATGTAGAAGATATC i canFam3.chr19 C 0 I 317 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=14400.000000 s hg38.chr9_KI270719v1_random 29495 3 + 176845 GGC s panTro5.chr4 135054255 3 + 194502333 GGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 34810 3 - 70559 GGC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448401 3 - 115148730 GGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390470 3 + 190429646 AGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909471 3 + 189454096 AGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900797 3 - 40319822 AGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454590 3 - 9219162 AGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979799 3 + 135778131 AGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746446 3 - 3013352 AGC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977711 3 + 8656713 AGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405897 3 - 190850796 AAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489356 3 - 25294431 AAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4045947 3 - 6311556 ACC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14900920 3 + 15034901 AGC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 929682 2 - 3201129 AG- i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44023030 317 - 53741614 I a score=1551685.000000 s hg38.chr9_KI270719v1_random 29498 186 + 176845 TTTGCCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATATAATTCATATTATATTTGATCAAAATTAATCACT-GATAAGAGACTATAGAAGGTAATCTCCTGCTTGTGGTCATATGTACTTAGGATTCTATTACT---------AAACAAAATGAAAGAATGCATTATATGCACAATTAGTGGTCTCTAGTAC s panTro5.chr4 135054258 186 + 194502333 TTTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATATAATTCATATTATACTTGATCAAAATTAATCACT-GATAAGAGACTATAGGAGGTAATCTCCTGCCTGTGGTCATATGTACTTAGGATTCTATTACT---------AAACAAAATGAAAGAATGCATTATATGGACAATTAGTGGTCTCTAGTAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 34813 186 - 70559 TTTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATATAATTCATATTATACTTGATCAAAATTAATCACT-GATAAGAGACTATAGAAGGTAATCTCCTGCTTGTGGTCATATGTACTTAGGATTCTATTACT---------AAACAAAATGAAAGAATGCATTATATGGACAATTAGTGGTCTCTAGTAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448404 185 - 115148730 TTTGTCTTGATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATATAATTCATAGTATACTTGATCAAAATTAATCACT-GATAAGAGACTATAGAAGGTAATCTCCTGCTTGTGGTCATATGTACTTAGGATTCTATTACT----------AACAAAATGAAAGAATGCATTCTATGGACAATTAGTGGTTTCTAGTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390473 184 + 190429646 TTTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATAAAATTCATGTTATACTTCATCAAAATTAATCACT-GGTA--AGACTATAGAAGGTAATCTCTTGCTTGTGGTTGTATGTGCTTAGGATTCTACTACT---------AAACAAAATGAAAGACTGCATTATACAGACAATTAGTGGTCTCTAGTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909474 184 + 189454096 TTTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATAAAATTCATGTTATACTTCATCAAAATTAATCACT-GGTA--AGACTATAGAAGGTAATCTCTTGCTTGTGGTCGTGTGTGCTTAGGATTCTACTACT---------AAACAAAATGAAAGACTGCATTATACGGACAATTAGTGGTTTCTAGTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900800 184 - 40319822 TTTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATAAAATTCATGTTATACTTCATCAAAATTAATCACT-GGTA--AGACTATAGAAGGTAATCTCTTGCTTGTGGTCGTATGTGCTTAGGATTCTACTACT---------AAACAAAATGAAAGACTGCATTATACGGACAATTAGTGGTCTCTAGTAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454593 184 - 9219162 ATTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATAAAATTCATGTTATACTTCATCAAAATTAATCACT-GGTA--AGACTATAGAAGGTAATCTCTTGCTTGTGGTCGTATGTGCTTAGGATTCTACTACT---------AAACAAAATGAAAGACTGCATTATAGGGACAATTAGTGGTCTCTAGTAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979802 184 + 135778131 TTTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATATAATTCATGCTATACTTCATCAAAATTAATCACT-GGTA--AGACTATAGAAGATAATCTCTTGCTTGTGGTCGTATGTGCTTAGGATTCTACTACT---------AAACAAAATGAAAGACTGCATTATACGGACAATTAATGGTCTCTATTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746449 184 - 3013352 TTTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATAAAATTCATGTTATACTTCATCAAAATTAATCACT-GGTA--AGACTATAGAAGGTAATCTCTTGCTTGTGGTCATATGTGCTTAGGATTCTACTACT---------AAACAAAATGAAAGACTGCATTATAAAGACAATTAGTGGTCTCTAGTAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977714 184 + 8656713 TTTGTCTTTATGGAGATTAACTTACAT-TTATGCTCA--------------TAATATAATTCATATTATACTTCATCAAAATTAATCACT-GGTA--AGACTATAGAAGGTAATCTCTTGCTTGTGGTCATATGTACTTAGGATTCTACTACT---------AAACAAAATGAAAGACTGCATTATACGGACAATTAGTGGTCTCCAGTAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129405900 190 - 190850796 TTTGTCGTTATGGAGATTAACTTAAAT-TTGTGTTCA--------------TAATGTAATTCATATTATACTTGATCAAAATTAATCACT-GATTTGAGGTTATAAAATGTAATCTCCTGTTTGTGGACACATGTACTTAGGATTCTATTACT-----AAAAAAAAAAAATGAAAGAAAGCATTCTATGGACAATTAGTGGTCTCTAGCAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489359 191 - 25294431 TTCGTCTTTATAGAGATTAACTTAAAT-TTATACTCA--------------TAACATAATTCATATTATACTTGATCAAAATTAATCACT-GATTTGAGGCTATAAAATGTAATCTCCTGTTTGTGGTCACATGTACTTAGGATTCTACGACT----AAAAAAAAAAAAATGAAAGAATATGTTCTATGGACAATTAGTGGTCTCTAGAAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4045950 188 - 6311556 TTTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATATAATACGTATTATACTTGATCAACATTAATCACT-GATTTgaggctatacaacgtaatctcctgtttgtggtcacatgtagttaggattctattact-------aaaagaaaaatgaaagaatgcattttatggacaattagtggtctctagcac i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14900923 195 + 15034901 TTTGTCTTTATGGAGATTAACTTAAAT-TTATGCTCA--------------TAATACAACTCATATTATACTTGATCAAAATTAATCACT-GATTTGAGGCTATAAAACGTAATCTCTTGTTTGTGGTCACATGTACTTAGGATTCTATTACTaaaaaaaaaaaaaaaaatgaaagaaTGCATTCTATGGACAATTAGTGGTCTCTAGCAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 929684 115 - 3201129 -GTGAGtttattaatagtaa---aaat-ata---------------------aataacaataataatGTAGGTC-----------TCACA-GTAGAGAGACACGAAAAGG-------------------ATTTATGTTTAAAATCTGATTATT---------------------------------------GGTgggtggcatctgtggc i otoGar3.GL873702 C 0 I 2 s canFam3.chr19 44023347 201 - 53741614 TTTGTCTTCATAGAAGTGAACTGATCTCTTGTTCTTAGAAGTGAATATCATTGATGATATTTATATTGAACTTGATAAAAATAATTTATTGGATAAGAAGTTATAAAACATAATC---TGCTCATGGGCATATGTACTTAGGGTTCTATTATG-------ACATAGATAACAGAAGAATGTATACTAAGGACAGTTAATGGTCTCTATTAC i canFam3.chr19 I 317 C 0 e micMur3.chr14 26306219 1233 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=83304.000000 s hg38.chr9_KI270719v1_random 29684 8 + 176845 AAAGAAAT s panTro5.chr4 135054444 8 + 194502333 AAAGAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 34999 8 - 70559 AAAGAAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448589 8 - 115148730 AAAGAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390657 8 + 190429646 AAATAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909658 8 + 189454096 AAATAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900984 8 - 40319822 AAATAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454777 8 - 9219162 AAATAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979986 8 + 135778131 AAATAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746633 8 - 3013352 AAATAAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977898 8 + 8656713 AAATAAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406090 8 - 190850796 AAGGAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489550 8 - 25294431 AAAGCAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4046138 8 - 6311556 aAAGAAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14901118 8 + 15034901 AAAAAAAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26307452 8 - 93316391 AAAGAAGT i micMur3.chr14 I 1233 C 0 s otoGar3.GL873702 929801 8 - 3201129 aaaggagt i otoGar3.GL873702 I 2 I 50 s canFam3.chr19 44023548 8 - 53741614 AAAGAAAT i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=278956.000000 s hg38.chr9_KI270719v1_random 29692 28 + 176845 TACCAGGTCATTTCCAATTCTCAATATT s panTro5.chr4 135054452 28 + 194502333 TACCAGGTCATTTCCAATTCTCAATATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 35007 28 - 70559 TACCAGGTCATTTCCAATTCTCAATATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448597 28 - 115148730 TACCAGGTCATTTCCAATTCCCAATATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390665 28 + 190429646 TACCAGGTAATTTCCAATTCCCAATATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909666 28 + 189454096 TACCAGGTAATTTCCAATTCCCAATATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34900992 28 - 40319822 TACCAGGTAATTTCCAATTCCCAATATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454785 21 - 9219162 TACCAGGTAATTT-------CCAATATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78979994 28 + 135778131 TACCAGGTAATTTCCAATTCCCAATATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746641 28 - 3013352 TACCAGGTAATTTCCAATTCTCAATATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977906 28 + 8656713 TACCAGGTAATTTCCAATTTCCAATATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406098 28 - 190850796 TACCAGATCATTTCCAACTCCCAATATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489558 28 - 25294431 TACCAGATCATTTCCAATTCCCaatatt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4046146 28 - 6311556 TACCAGATCATTTCCAATTCCCAATATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14901126 28 + 15034901 TACCAGATCATTTCCAATTCCCAATATT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26307460 28 - 93316391 TGCCAGGTCATTTCCAATTATCAATATT i micMur3.chr14 C 0 C 0 s canFam3.chr19 44023556 28 - 53741614 TACTGAGTCATTTCCAACTAGAAATGTC i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1709927 0 + 5974691 C e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929809 50 - 3201129 I a score=21529.000000 s hg38.chr9_KI270719v1_random 29720 8 + 176845 A-------AAAAAAA s panTro5.chr4 135054480 8 + 194502333 A-------AAAAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 35035 7 - 70559 --------AAAAAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448625 8 - 115148730 T-------AAAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390693 10 + 190429646 G-----AAAAAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909694 11 + 189454096 G----AAAAAAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34901020 10 - 40319822 G-----AAAAAAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454806 11 - 9219162 G----AAAAAAAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78980022 10 + 135778131 G-----AAAAAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746669 15 - 3013352 GAAAAAAAAAAAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977934 10 + 8656713 G-----AAAAAAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406126 7 - 190850796 A-------AAAAAA- i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6489586 8 - 25294431 a-------aaaaaaa i saiBol1.JH378129 C 0 I 9 s cebCap1.NW_016107420v1 4046174 8 - 6311556 A-------AAAAAAA i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14901154 8 + 15034901 A-------AAAAAAA i aotNan1.NW_018507635v1 C 0 I 368 s micMur3.chr14 26307488 7 - 93316391 A-------AAAAAA- i micMur3.chr14 C 0 C 0 s canFam3.chr19 44023584 7 - 53741614 A-------AAAAGC- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1709927 8 + 5974691 ------AAAAAAAA- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929809 50 - 3201129 I a score=294784.000000 s hg38.chr9_KI270719v1_random 29728 44 + 176845 ---------GTTTATT-TCTTACTGCACTATCAAATTGGAAAGGTCAGTACAGG s panTro5.chr4 135054488 44 + 194502333 ---------GTTTATT-TCTTACTGCACTATCAAATTGGAAAGGTCAGTACAGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 35042 44 - 70559 ---------GTTTATT-TCTTACTGCACTATCAAATTGGAAAGGTCAGTACAGG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448633 44 - 115148730 ---------GCTTATT-TCTTACTGCACTATCAAATTGGAAAGGTCAGTACAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390703 42 + 190429646 ---------GTTTATT-TCCTACTGCACTATCAAATTGGAAAGGTCAATACA-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909705 42 + 189454096 ---------GTTTATT-TCCTACTGCACTATCAAATTGGAAAGGTCAATACA-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34901030 42 - 40319822 ---------GTTTATT-TCCTACTGCACTATCAAATTGGAAAGGTCAATACA-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454817 42 - 9219162 ---------GTTTATT-TCCTACTGCACTATCAAATTGGAAAGGTCAATACA-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78980032 42 + 135778131 ---------GTTTATT-TCCTACTGCACTATCAAATTGGAAAGGTCAACACA-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746684 42 - 3013352 ---------GTTTATT-TCCTACTGCACTATCAAATTGGAAAGGTCAATACA-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977944 42 + 8656713 ---------GTTTATT-TCCTACTGCACTATCAAATTGGAAAGGTCAATACA-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406134 32 - 190850796 -------------GTT-TGTTACTG------TAAATTGGAAAGGTGTATACA-- i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6489603 32 - 25294431 -------------GTT-TGTTACTA------CAAATTGGAAAGATCTATACA-- i saiBol1.JH378129 I 9 C 0 s cebCap1.NW_016107420v1 4046183 32 - 6311556 -------------GTT-TGTTACTG------CAAATTGGAAAGGTCTATACA-- i cebCap1.NW_016107420v1 I 1 C 0 s micMur3.chr14 26307495 42 - 93316391 ---------GTTTATT-TGCTACTGAACTATTAAATTGGAAAGGTCTATTCA-- i micMur3.chr14 C 0 C 0 s canFam3.chr19 44023591 40 - 53741614 ----------TTTATT-TGTTG-TGAACCTTCAACTTGGAAAGATCTATACA-- i canFam3.chr19 C 0 I 2 s dasNov3.JH569232 1709935 52 + 5974691 ATTGAGATAGCCAATTCTGTTGCTGCACTTTCAAATTTAAAAGATCTATGTA-- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929809 50 - 3201129 I e aotNan1.NW_018507635v1 14901162 368 + 15034901 I a score=57884.000000 s hg38.chr9_KI270719v1_random 29772 5 + 176845 GGCAT s panTro5.chr4 135054532 5 + 194502333 GGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 35086 5 - 70559 GGCAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448677 5 - 115148730 GGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390745 5 + 190429646 GGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909747 5 + 189454096 GGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34901072 5 - 40319822 GGCAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454859 5 - 9219162 GGTAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78980074 5 + 135778131 GGTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746726 5 - 3013352 GGTAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977986 5 + 8656713 GGCAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406166 5 - 190850796 GGCAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489635 5 - 25294431 GGCAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4046215 5 - 6311556 GTCAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14901530 5 + 15034901 GGCAT i aotNan1.NW_018507635v1 I 368 C 0 s micMur3.chr14 26307537 5 - 93316391 GGCAT i micMur3.chr14 C 0 C 0 s canFam3.chr19 44023633 3 - 53741614 --CAT i canFam3.chr19 I 2 I 3 s dasNov3.JH569232 1709987 5 + 5974691 AGCAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 929809 50 - 3201129 I a score=243501.000000 s hg38.chr9_KI270719v1_random 29777 21 + 176845 TCAATAATAGTAAAAATATGA s panTro5.chr4 135054537 21 + 194502333 TCAATAATAGTAAAAATATGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 35091 21 - 70559 TCAATAATAGTAAAAATATGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448682 21 - 115148730 TCAATAATAGTAAAAATACAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390750 21 + 190429646 TCAATAATAGTAAAAATATGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909752 21 + 189454096 TGAATAATAGTAAAAATATGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34901077 21 - 40319822 TCAATAATAGTAAAAATATGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454864 21 - 9219162 TCAATAATAGTAAAAATATGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78980079 21 + 135778131 TCAATAATAGTAAAAATATGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746731 21 - 3013352 TCAATAATAGTAAAAATATGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5977991 21 + 8656713 GCAATAATAGTAAAAATATGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406171 21 - 190850796 TCGATAACAGTAAAAATAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489640 21 - 25294431 TCAGTAAGAGTAAAAATATGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4046220 21 - 6311556 TCAATAAGAGTAAAAATATGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14901535 21 + 15034901 TCAATAAGAGTAAAAATATGA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26307542 21 - 93316391 TCAATAATAGTAAAAATATGA i micMur3.chr14 C 0 I 251 s otoGar3.GL873702 929859 21 - 3201129 ccaaaaactgcaaaaaaaAAA i otoGar3.GL873702 I 50 C 0 s canFam3.chr19 44023639 21 - 53741614 ATAATAATAATGAGAAGATGA i canFam3.chr19 I 3 I 6 s dasNov3.JH569232 1709992 21 + 5974691 CCAATAAGAAGAAGaatataa i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=2248702.000000 s hg38.chr9_KI270719v1_random 29798 257 + 176845 ------ATAACAATCAT--GTATAACAACAGAATCATTTAAAAAGATGTATATTTAAAATGTGATTATTGCATTTTATTTCCCCTGGCAGAAAAT------AATAAACTGGAGAAAAATCACATTTGATTGATGTCTGTTACATGGATTTTTAAAATTTGTAT--CAATGAATGCTTTTTAAAGGTAAACTAATTGAGGCCTACCGAAGGTAAATAAATCTTTAGTTATTTTGGTAAATAT---------ATTTTACAGTTTCATTCTTTTTCAACTTAAGT s panTro5.chr4 135054558 259 + 194502333 ------ATAGCAATCATATGTATCACAACAGAATCATTTAAAAAGATGTATATTTAAAATGTGATTATTGCATTTTATTTCCCGTGGCAGAAAAT------AATAAACTGGAGAAAAATCACATTTGATTGATGTCTGTTACATGGATTTTTAAAATTTGTAT--CAATGAATGCTTTTTAAAGGTAAACTAATTGAGGCCTACCGAAGATAAATAAATCTTTAGTTATTTTGGTAAATAT---------ATTTTACAGTTTCATTCTTTTTCAACTTAAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 35112 258 - 70559 ------ATAACAATCATATGTATAACAACAGAATCATTTAAAAAGATGTATATTTAAAATGTGATTATTGCATTTTATTTCCCCTGGCAGAAAAT------AATAAACTGGAGAAAAATCACATTTGATTGATGTCTGTTACATGGATTTTTAAAATTTGTAT--CAATGAATGCTTTTTAAAGGTAAACTAATTGAGGCCTA-CGAAGATAAATAAATCTTTAGTTATTTTGGTAAATAT---------ATTTTACAGTTTCATTCTTTTTCAACTTAAGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448703 259 - 115148730 ------ATAACAATCATATGTATCACAACAGAATCATTTAAAAAGATGTGTATTTAAAATGTGATTATTGCATTATATTTCCCCTGGCAGAAAAT------AATAAACTGGAGAAAAATCACATTTGATTTATGTCTGTTACATGGATTTTTAAAATTTGTAT--CACTGAACGTTTTTTAAAGGCAAACTAACTGAGGCCTACCGAAGATAAATAAATCTTTAGTTATTTTGGTAAATAT---------ATTTTACGATTTCATTCTTTTTCAACTTAAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131390771 258 + 190429646 ------ATAACAATCATATGTATCACAATAGAATCATTTTAAAAGCTGTGTATTTAAAACATGATT-TTGCATTATATTTCCCCTGGCAGAAAAT------AATAAATTGGAGAAAAATCACATTTGATTGTTGTCAGTTACATGGATGTTTAAAATTTGTAC--CACTGAACACTTTTTAAAGATAAACTAATTGATGCCTATGGAAGATAAATAAATCTTTAGTTATTTTGGTAAATTT---------ATTTTGCGGTTTCATTCCTTTTCAACTTAAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130909773 258 + 189454096 ------ATAACAATCATATGTATCACAATAGAATCATTTTAAAAGCTGTGTATTTAAAACATGATT-TTGCATTATATTTCCCCTGGCAGAAAAT------AATAAATTGGAGAAAAACCACATTTGATTGTTGTCAGTTACATGGATGTTTAAAATTTGTAC--CACTGAACACTTTTTAAAGATAAACTAATTGATGCCTATGGAAGATAAATAAATCTTTAGTTATTTTGGTAAATTT---------ATTTTACGGTTTCATTCCTTTTCAACTTAAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34901098 258 - 40319822 ------ATAACAATCATATGTATCACAATAGAATCATTTTAAAAGCTGTGTATTTAAAACATGATT-TTGCATTATATTTCCCCTGGCAGAAAAT------AATAAATTGGAGAAAAACCACATTTGATTGTTGTCAGTTACATGGATGTTTAAAATTTGTAC--CACTGAACACTTTTTAAAGATAAACTAATTGATGCCTATGGAAGATAAATAAATCTTTAGTTATTTTGGTAAATTT---------ATTTTACGGTTTCATTCCTTTTCAACTTAAGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4454885 258 - 9219162 ------ATAACAATCATATGTATCACAATAGAATCATTTTAAAAGATGTATATTTAAAACATGATT-TTGCATTATATTTCCCCTGGCAGAAAAT------AATAAATTGGAGAAAAATCACATTTGATTGTTGTAAGTTACATGGATGTTTAAAATTTGTAC--CACTGAACACTTTTTAAAGATAAACTAATTGATGCGTATGGAAGATAAATAAATCTTTAGTTATTTTGGTAAATTT---------ATTTTACAGTTTCATTCCTTTTCAACTTAAGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78980100 259 + 135778131 ------ATAACAATCATATGTATCACAACAGAATCATTTTAAAAGATGTATATTTAAAACATGATTATTGCATTATATTTTCCCTGGCAGAAAAT------AATAAATTGGAGAAAAATCACGTTTGATTGTTGTCAGTTACATGGATTTTTAAAATTTGTAC--CACTGAACGCTTTTTAAAGGTAAACTAATTGACGCCTATGGAAGATAAATAAATCTTTAGTTATTTTGGTAAATTT---------ATTTTACAGTTTCATTCCTTTTCAACTTAAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2746752 258 - 3013352 ------ATAACAATCATATGTATCACAATAGAATCATTTTAAAAGATGTATATTTAAAACATGATT-TTGCATTATATTTCCCCTGGCAGAAAAT------AATAAATTGGAGAAAAATCACATTTGATTGTTGTCAGTTACATGGATGTTTAAAATTTGTAC--CACTGAACACTTTTTAAAGATAAACTAATTGATGCCTATGGAAGATAAATCAATCTTTAGTTATTTTGGTAAATTT---------ATTTTACAGTTTCATTCCTTTTCAACTTAAGC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5978012 259 + 8656713 ------ATAACAATCATATGTATCACAACAGAATCATTTTAAAAGATATATATTTAAAACATGATTATTGCATTATATTTCCCCTGGCAGAAAAT------AATAAATTGGAGAAAAATCACATTTGATTGTTGTCAGTTACATGGCTTTTTAAAATTTGTAC--CACTGAACGCTTTTTAAAGGTAAACTAATTGACGCCTATGGAAGATAAATAAATCTTTAGTTATTTTGGTAAATTT---------ATTTTACAGTTTCATTCCTTTTCAACTTAAGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406192 256 - 190850796 ------ATAAAAGTAATATGTATCACCACAGAATCATTTAAAAAGATGTATATTtaacatgtgattattgcattatattt-ccctggtagaaaat------aatatattggagaaaaattatccttgattgatgtcaatttcatggatttttaaaatttctct--cactgaattCTTTTCAAAGTTAAACTTATTGAAGCCTACCAAAGATAAATAACTCTTCAGTTA-TTTGGT-AATTT---------TTTTCACAGTTTCATTCTTTTTCAACTTAAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489661 256 - 25294431 ------ATAACAATAATATGTATCACAACAGAATCATTTAAAAAGATGTATATTTAAAATGTGATTATTGCATTGTATTTCCCCTGGAAGAAAAT------AATATATTGGAGAAAAATCATCCTTGATTGATGTCAATTTCCTGGATTTTT-AAATTTCTCT--CACTGAATTCTTTTCAAAGTTAATCTTACTGAAGTCTACCAAAGATAAATAACTCTTCAGTTA-TTTGGT-AATTT---------TTTTCACAGTTTCATTCTTTTTCAACTTAAGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4046241 256 - 6311556 ------ATAACAATAATATGTATTACAACAGAATCATTAAAAAAGATATATATTtaaaatgtgattatttcattatatttcccttggtagaaaat------actatattggagaaaaatcatccttgattgatgtcaatttcatggattttt-aaatttctct--cactgaattCTTTTCAAAGTTAAACTTACTGAAGCCTATCAAAGATAAATAACTCTTTAGTTA-TTTGGT-AATTT---------TTTTCACAGTTTCATTCTTTTTCAACTTAAGC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14901556 257 + 15034901 ------ATAACAATAATGTGTATCACAACAGAATCATTAAAAAAGATGTATATTTAAAATGTGATTATTGCATTATATTTCCCCTGGTAGAAAAT------ATTATATTGGAGAAAAATCATCCTTGATTGATGTCAATTTCATGGATTTTTAAAATTTCTCT--CACTGAATTCTTTTCAAAGTTAAACTTATTGAAGCCTACCAAAGGTAAATAACTCTTCAGTTA-TTTGGT-AATTT---------TTTTCACAGTTTCATTCTTTTTCAACTTAAGC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 929880 225 - 3201129 --------------------------AAAAAAA------AAAAAGAAAGA-----AAGATCTGATTATTGGTTTATATTGTCCTTGGAGAAAATA------AATAAATTGTAGAAAAATCATATTTGGTTGATGTCATTTACATAGGTTTATCAAATTTCAAAGGCATTGAATTCTTTTTAAAGATAAAATAACTGACGACTACCAAGGGGAAGCAAATCTTTATTTA-TGTGGAGATTTT---------TTTTTACAGT----TTATTTCTCAATTAAAGC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44023666 246 - 53741614 ------ATAGTAATGAGATGTCTCATAAGAGAC---ATGAAAAGCATTGACATTTGAAATCTGATTATTGCTTTATGTTGCCCTTTGTAGAAACT-----AAACAAACTAGA-AAAAATCAAATTTGATTGCTGTCAGT------GATGTT---GATTTATGT--CACTAAAATATTTGTAAAGATAAAATAATTGGAACTTAGCAAAAAAGAAACAAACTTTCCATACTTAGGTGAAATT----------TTAAAAAATGTATTTCTTTTTCAGTCAAGGC i canFam3.chr19 I 6 C 0 s dasNov3.JH569232 1710013 255 + 5974691 ataataataataattaGATGCCTCAGAG-------ACATGAAAAACATTGCATTTGAAATCTGATTAGTGATTTATTTTGCCCTTGTTAAAAAAAAAACAAAATGGACTAGAGACAAATTATCTTGCAGTGATTTA---TATAGGGATTTATACAATTTCTACTTCACTGGATTATTTTAGAGATTAAA--AATTGGGGC---------ATAAAGGAGTCTTTAATTAGGTTGGTGAAAATGAAAACCAAATTTTAAA------TCCCTTCTCAATTAAGGC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26307563 251 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=708203.000000 s hg38.chr9_KI270719v1_random 30055 72 + 176845 TAGATAATAGGTACTATA-TTCTCTCCTAATGTAAATGTTTACGAGCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAG s panTro5.chr4 135054817 72 + 194502333 TAGATAATAGGTACTACA-TTCTCTCCTAATGTAAATGTTTATGAGCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 35370 72 - 70559 TAGATAATAGGTACTATA-TTCTCTCCTAATGTAAATGTTTATGAGCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90448962 72 - 115148730 TAGATAATAAGTACTATA-TTCTCTCCTAATGTAAATGTTTATGAGCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391029 72 + 190429646 TAGGTAAGAGGTACTATA-TTCTCTCCTGATGTAAACGTTTATGATCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910031 72 + 189454096 TAGGTAAGAGGTACTATA-TTCTCTCCTGATGTAAACGTTTATGATCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34901356 72 - 40319822 TAGGTAAGAGGTACTATA-TTCTCTCCTGATGTAAACGTTTATGATCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4455143 72 - 9219162 TAGGTAAGAGGTACTATA-TTCTCTCCTGATGTAAATGTTTATGATCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78980359 72 + 135778131 TAGGTAAGAGGTGCTATA-TTCTCTCCTAATGTAAATGTTTATGATCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747010 72 - 3013352 TAGGTAAGAGGTACTATA-TTCTCTCCTGATGTAAATGTTTATGATCATTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5978271 72 + 8656713 TAGGTAAGAGGTACTATA-TTCTCTCCTAATGTAAATGTTTATGATCATTGAAATTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406448 72 - 190850796 TTGATAATAGATACCATA-TTGTCTTCCAATGTAAGTGCTTATGAGTGTTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489917 72 - 25294431 TCAATAACAAATACCATG-TTATTTCCCAATATAAGTGTTTATGAGTGTTGAAACTCCA-----------------------------------------------------------TCTAGAGA-----------------------------------------------------------------------------------------------AAATTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4046497 72 - 6311556 TCAATAATAGATACCATA-TTGTCTCCCAATGTAAGTGCTTATGAGTGTTGAAACTCCA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14901813 72 + 15034901 TCGATAATAGATACCATA-TTGTCTCCCAATGTAAGTGCTTATGAGTGCTGAAACTCTA-----------------------------------------------------------TCTGGAGA-----------------------------------------------------------------------------------------------AAATTA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26307814 72 - 93316391 TAGATAATAGGTACTATA-TTCTCTCCAAATTTAAATGTTTATAAGCTTTGAAACTCCA-----------------------------------------------------------TCTAGAGA-----------------------------------------------------------------------------------------------AAATAG i micMur3.chr14 I 251 I 113 s otoGar3.GL873702 930105 72 - 3201129 TAGATAACAGGTATTATA-TTCTCTTCAAATTTAAATGTTTTTAAGCTTTAAAACTTCA-----------------------------------------------------------TTTAATGA-----------------------------------------------------------------------------------------------AAATAG i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44023912 226 - 53741614 CAGAAAAT-GGTACTATATTTCCCTACAAATTTAAATGTGTTTAAGCTTTGAAATTCCAAGTAGAgggcagccccggtggcgcagcggttcagcgccacctgcagcccaggacgtgatcctggagacccgggatcgagtcccatgtcgggctctgcatggagcctgcttctctctctgcctgtgtctctgcctctcattctctctctgtgtctctataaataaataa i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1710268 72 + 5974691 TAGTTAACAGGGACTATA-TTCCTACCAAGCTGACATGTTTATAAACTTTGAAATCCTA-----------------------------------------------------------TTTACAGA-----------------------------------------------------------------------------------------------AAATAA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=804218.000000 s hg38.chr9_KI270719v1_random 30127 115 + 176845 AAACACT---TTTAATTTAAATGACATTT-GAAGAAGGAAA-----TGTATAAATGTATTCAAAACTG---------TAAGTGAAAATGGGAAGGT---------------CCTAT-TAA---------AAAAAAAAGAAAG------------GACA-------AACACTTTCCAA s panTro5.chr4 135054889 111 + 194502333 AGACACT---TTTAATTTAAATGACATTT-GAAGAAGGAAA-----TGTATAAATGTATTCAAAACTG---------TAAGTGAAAATGGGAAGGT---------------CCTAT-TGA---------AAAAAAAAG----------------GACA-------AACACTTTCCAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 35442 115 - 70559 AAACACT---TTTAATTTAAATGACGTTT-GAAGAAGGAAA-----TGTATAAATGTATTCAAAACTG---------TAAGTGAAAATGGGAAGGT---------------CCTAT-TAA---------AAAAAAAAGAAAG------------GACA-------AACACTTTCCAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449034 115 - 115148730 AGACACT---TTTAATTTAAATGACATTT-GAAGAAGGAAA-----TGTATAAATGTATTCAAAACTG---------TAAGTGAAAATGGGAAGGT---------------CCTAT-TAG---------AAAAAAAAGAAAG------------AACA-------AACACTTTCCAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391101 116 + 190429646 GGACACT---TTTAATTTAAATCACATTT-GAAGAAGGTAA-----TGTATAAATTTATTCAAAACTGT----TTTTTAAGTGAAAATGGGAAGGT---------------CCTAT-TTA---------AAAAGAAAA----------------AAGA-------AATACTTTGCAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910103 116 + 189454096 GGACACT---TTTAATTTAAATCACATTT-GAAGAAGGTAA-----TGTATAAATTTATTCAAAACTGT----TTTTTAAGTGAAAATGGGAAGGT---------------CCTAT-TTA---------AAAAGAAAA----------------AAGA-------AATACTTTGCAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34901428 116 - 40319822 GGACACT---TTTAATTTAAATCACATTT-GAAGAAGGTAA-----TGTATAAATTTATTCAAAACTGT----TTTTTAAGTGAAAATGGGAAGGT---------------CCTAT-TTA---------AAAAGAAAA----------------AAGA-------AATACTTTGCAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4455215 116 - 9219162 GGACACT---TTTAATTTAAATCACATTT-GAAGAAGGTAA-----TGTATAAATTTATTCAAAACTGT----TTTTTAAGTGAAAATGGGAAGGT---------------CCTAT-TTA---------AAAAGAAAA----------------AAGA-------AATACTTTGCAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78980431 116 + 135778131 AGACACT---TTTAATTTAAATCACATTT-GAAGAAGGAAA-----TGTATAAATTTATTCAAAATTGT----TTTTTAAGTGAAAATGGGAAGGT---------------CCTAT-TTA---------AAAAGAAAA----------------AAGA-------AATACTTTGCAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747082 116 - 3013352 GGACACT---TTTAATTTAAATCACATTT-GAAGAAGGTAA-----TGTATAAATTTATTCAAAACTGT----TTTTTAAGTGAAAATGGGAAGGT---------------CCTAT-TTA---------AAAAGAAAA----------------AAGA-------AATACTTTGCAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5978343 116 + 8656713 AGACACT---TTTAATTTAAATCATATTT-GAAGAAGGAAA-----TGTATAAATTTATTCAAAACTGT----TTTTTAAGTGAAAATGGGAAGGT---------------CCTAT-TTA---------AAAAGAAAA----------------AAGA-------AATACTTTGCAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406520 123 - 190850796 GAG-ACC---TTTAATTTAAGTAATGTTC-GAAAAAGGAAA-----TGGATAAATGTGTTCAAAACTG-----TTAGTAAGTaaaagtgggaaagt---------------cctat-taaaataacaataagaagaag----------------aaca-------agctctttccaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6489989 123 - 25294431 GAG-ATC---TTTAATTTAAGTAATGTTT-GAAGAAGGAAA-----TGGATAAATGTATTCAAAACTG-----TTAGTAAGTAAAAGTGGGAAGGT---------------CCTAT-TAAAATAATAATAAGAAGAAG----------------AACA-------AGCTCTTTCCAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4046569 123 - 6311556 GAG-ATA---TTTAATTTAAGTAATGTTT-GAAGAAGGAAA-----TGGATAAATGTATTCAAAACTG-----TTAGTAAGTAAAAGTGGGAAGGT---------------CCTAT-TAAAATAATAATAAGAAGAAG----------------AACA-------AGCTCTTTCCAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14901885 123 + 15034901 GGA-ATC---TTTAATTTAAGTAATGTTA-GATTAAGGAAA-----TGGATAAATGTATTCAAAACTG-----TTAGTAAGTAAAAGTGGGAAGGT---------------CCTAT-TAAAATAATAATAAGAAGAAG----------------AACA-------AGCTCTTTCCAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 930178 115 - 3201129 GAAATGA---TTTTGTTTAAATCATGGTT-GAATAAGGAAA------GTACAAATTTGTCCTGAACTATAATATTAGTAAGTAAACGTTTAAAAGA---------------CCTG--------------AGGGGCAGG----------------GAGG-------GAGATCTTTCAA i otoGar3.GL873702 I 1 I 1 s canFam3.chr19 44024139 146 - 53741614 taaaatc---tttaaaaaaaaAGAAATTA-AAGTAGAGAAAATAGAGACATGATTTACCTTAAAACAG----------GACTGAATAACAGAATGTATACATTTGTATGTACCCAT-TAA---------TAAGAGAAGAAGGGATCCAGAATAAAACA-------AACTCTTCCCAA i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1710340 122 + 5974691 ----ACTCAGTTTAATTTAAATCATGTTTAGAATAAGGGAA-----TGAATAAATTCACCC-ATACTG-----TCAGTATCTGAAAATGAAAAGGG---------------CCAAGATAA---------AAAAACCAA----------------AACAGTAGAACAACTCTTCTTGA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26307886 113 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=5355537.000000 s hg38.chr9_KI270719v1_random 30242 469 + 176845 TGACCTTTCTATAATATTAGCAAATTTATTATGATCTGTTAT-----------GA-AAGACTGTTTTGCCTTCCTTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAATTGAAAAGTAACTTCAGGTATGGGTCCATTTTAATGTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtacaatcatataatcttagagccaa--gg----acccttagagattatctaatcctattct---attaatgcatgatgaaatgggcttagcaatctgtctaaggttacacaAATTC----AAAAACACAT-AGAAAGTTTTCATAATCAAAT-TAAATTAAAAG--TATAAAACAAT-----GTCACTAAT----T------T-------ATGTATAAGAAAA-------TATTAAAT---------ATCATTT-TA---TA---TGAAGTGATTCTGATAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAATTTTAGTTTATCATCCAAA----TATGATA--------------------------------------------ATACTATACACTTTTAT s panTro5.chr4 135055000 475 + 194502333 TGACCTTTCTATAATATTAGCAAATTTATTATGATCTGTTAT-----------GA-AAGACTGTTTTGCCTTCCTTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAATTGAAAAGTAACTTCAGGTATGGCTCCATTTTAATGTCCCTCTACAAGATCTGCAGTGCCA---------TTAATTACAAtcatataatcttagagccaaaagg----aaccttggagattatctaatcctattct---attaatgcaTGATGAAATGGGCTTAGCAATCCGTCTAAGGTTACACAAATTC----AAAAACACAT-AGAAAGTTTTCATAATCAAAT-TAAATTAAAAG--TATAAAACAATTAA-TGTCACTAAT----T------T-------ATGTATAAGAAAA-------TATTAAAT---------ATCATTT-TA---TA---TGAAGTGATTCTGATAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAATTTTAGTTTATCATCCAAA----TATAATA--------------------------------------------ATAATATACACTTTTAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 35557 473 - 70559 TGACTTTTCTATAATATTAGCAAATTTATTATGATCTGTTAT-----------GA-AAGACTGTTTTGCCTTCCTTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAATTGAAAAGTAACTTCAGGTATGGGTCCATTTTAATGTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtacaatcatataatcttagagccaa--gg----acccttagagattatctaatcctattct---attaatgcatgatgaaatgggcttagcaatctgtctaaggttacacaAATTC----AAAAACACAT-AGAAAGTTTTCATAATCAAAT-TAAATTAAAAG--TATAAAACAATTAA-TGTCACTAAT----T------T-------ATGTATAAGAAAA-------TATTAAAT---------ATCATTT-TA---TA---TGAAGTGATTCTGATAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAATTTTAGTTTATCATCCAAA----TATGATA--------------------------------------------ATAATATACACTTTTAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449149 460 - 115148730 TGACCTTTCTTTAATGTTAGCAAATTTATTATGATCTGTTAT-----------GA-AAGGCTGTTTTGCCTTCCTTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAGTTGAAAAGTAACTTCAGGTATGGGTCCAATTTAATTTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtagaatcatataatcttagagccaaaagg----atccttagagattatctaatcctattct---attaatgcatgaggaaatggacttagcaatctgtctaaggttacacaAATTC----AAAAACACAT-AGAAAGTTTTCATAATC-----------AAAAG--TATAAAACAAT----TGTTACTAAT----T------T-------ATGTATAAGAAAA-------TATTAAAT---------ATCATTT------TA---TGAAGTGATTCTGATCATTTTAATGAGTTCAAAACAATGCTTCTAAATATTTCAGAATTTTAGTTTATCATCCAAA----TATAATA--------------------------------------------ATAATATACACTTTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391217 482 + 190429646 TGACCTTTCTATAATGTTAGCAAATTTACTATGATCTGTTAT-----------GA-ATGACTGTTTTGCCTTCCGTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAACTGAAAAGTAGCTTCAGGTATGGGTCCAATTTAATTTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtagaatcatataatcttagagtcaaaagg----gtccttagagattgtctaatcctattct---attaatgcatgaggaaatgggtgtagcaatctgtctaaggttgcacaAATTC----AAAAACACAT-AGAAATTTTTCATAATCAAAT-TAAATTAAAAGTATATAAAACAATTAA-TGTTACTAATTTACT------T-------ATGTACAAGAAAA-------TATTAAAT---------ACCATTTTTA---TA---TGAAGTGGTTTTGATAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAATTTTAGTTTATCAACCAAA----TATAATA--------------------------------------------ATAATACACACTTTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910219 482 + 189454096 TGACCTTTCTATAATGTTAGCAAATTTATTATGATCTGTTAT-----------GA-ATGACTGTTTTGCCTTCCGTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAACTGAAAAGTAGCTTCAGGTATGGGTCCAATTTAATTTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtagaatcatataatcttagagtcaaaagg----gtccttagagattgtctaatcctattct---attaatgcatgaggaaatgggtgtagcaatctgtctaaggttgcacaAATTC----AAAAACACAT-AGAAATTTTTCATAATCAAAT-TAAATTAAAAGTATATAAAACAATTAA-TGTTACTAATTTACT------T-------ATGTACAAGAAAA-------TATTAAAT---------ACCATTTTTA---TA---TGAAGTGGTTTTGATAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAATTTTAGTTTATCAACCAAA----TATAATA--------------------------------------------ATAATACACACTTTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34901544 482 - 40319822 TGACCTTTCTATAATGTTAGCAAATTTATTATGATCTGTTAT-----------GA-ATGACTGTTTTGCCTTCCGTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAACTGAAAAGTAGCTTCAGGTATGGGTCCAATTTAATTTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtagaatcatataatcttagagtcaaaagg----gtccttagagattgtctaatcctattct---attaatgcatgaggaaatgggtgtagcaatctgtctaaggttgcacaAATTC----AAAAACACAT-AGAAATTTTTCATAATCAAAT-TAAATTAAAAGTATATAAAACAATTAA-TGTTACTAATTTACT------T-------ATGTACAAGAAAA-------TATTAAAT---------ACCATTTTTA---TA---TGAAGTGGTTTTGATAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAATTTTAGTTTATCAACCAAA----TATAATA--------------------------------------------ATAATACACACTTTTAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4455331 482 - 9219162 TGACCTTTCTATAATGTTAGCAAATTTATTATGATCTGTTAT-----------GA-ATGACTGTTTTGCCTTCCGTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAACTGAAAAGTAGCTTCAGGTATGGGTCCAATTTAATTTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtagaatcatataatcttagagtcaaaagg----gtccttagagattgtctaatcctattct---attaatgcatgaggaaatgggtgtagcaatctgtctaaggttgcacaAATTC----AAAAACACAT-AGAAATTTTTCATAATCAAAT-TAAATTAAAAGTATATAAAACAATTAA-TGTTACTAATTTACT------T-------ATGTATAAGAAAA-------TATTAAAT---------ACCATTTTTA---TA---TGAAGTGGTTTTGATAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAATTTTAGTTTATCAACCAAA----TATAATA--------------------------------------------ATAATACACACTTTTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78980547 480 + 135778131 TGACCTTTCTATAATGTTAGCAAATTTATTATGATCTGTTAT-----------GA-ATGACTGTTTTGCCTTCCGTGTTTCTACTGTATCAAATCCCTAAGTACTAATTCAACTGAAAAGTAGCTTCAGGTATGGGTCCAATTTAATTTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtagaatcatataatcttagagtcaaaagg----atccttagagattgtctaatcctattct---actaatgcatgaggaaatgggtgtagcaatctgtctaaggtttcacaAATTC----AAAAACACAC-AGAAAGTTTTCATAATCAAAT-TAAATTAAAAG--TATAAAACAATTAA-TGTTACTAATTTACT------T-------AAGTATAAGAAAA-------TATTAAAT---------ACCATTTTTA---TA---TGAAGTGGTTTTGATAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAATTTCAGTTTATCATCCAAA----TGTGATA--------------------------------------------ACAATACACACTTTTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747198 482 - 3013352 TGACCTTTCTATAATGTTAGCAAATTTATTATGATCTGTTAT-----------GA-ATGACTGTTTTGCCTTCCGTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAACTGAAAAGTAGCTTCAGGTATGGGTCCAATTTAATTTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtagaatcatataatcttagagtcaaaagg----gtccttagagattgtctaatcctattct---attaatgcatgaggaaatgggtgtagcaatctgtctaaggttgcacaAATTC----AAAAACACAT-AGAAATTTTTCATAATCAAAT-TAAATTAAAAGTATATAAAACAATTAA-TGTTACTAATTTATT------T-------ATGTATAAGAAAA-------TATTAAAT---------ACCATTTTTA---TA---TGAAGTGGTTTTGATAATTTTAATGAGTTTATAACAATGCTTCTAAATATTTCAAAATTTTAGTTTATCAACCAAA----TATAATA--------------------------------------------ATAGTACACACTTTTAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5978459 476 + 8656713 TGACCTTTCTATAATGTTAGCAAATTTATTATGATCTGTTAT-----------GA-ATGACTGTTTTGCCTTCCGTGTTTCTACTGTCTCAACTCCCTAAGTACTAATTCAACTGAAAAGTAGCTTCAGGTATGGGTCCAATTTAATTTCCCTCTACAAGATCTGCAGTGCCA---------TTAATtaaaatcatataatcttagagtcaaaagg----atccttagagattgtctaatcctattct---attaatgcatgaGGAAATGGGTGTAGCAA----TCTAAGGTTGCACAAATTC----AAAAACACAT-AGGAAGTTTTCATAATCAAAT-TAAATTAAAAG--TATAAAACAATTAA-TGTTCCTAATTTACT------T-------ATGTATAAGAAAA-------TATTAAAT---------ACCATTTTTA---TA---TGAAGTGGTTTTGATAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAATTTTACTTTATCATCCAAA----TATAATA--------------------------------------------ATAATACACACTTTCAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129406643 468 - 190850796 tgacctctttgtaacattagcaaatttattatgatctgttat-----------aa-aatactgttttgccttccttgtttctAGTTTCTCAACTCCCTAAGTATTAATTCAATTGAAAAGTAACTTCAGGTATGGGTCCAACTTAATTTCCCTGTAGAATATCTACTGTGCCA---------TTAATtagaatcatataatcttagagttaaaagg----atccttagagattgtctcattctattct---attaattcatgaggaaatgggtttagcaatcttactaaggttacacaAATGC--A-AAAAACACAT-AGAAAGTTTTTAAAATC-----------AAAAG--TATAAAACAATTGA-TGTTACTCATTT-TT------T-------ATGTATACGAAAA-------TATTAAAT---------CTTATTTTTA---TA-----AAGTGATTCTGGTAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAGAACTTTAATTTATCATCCAAA----TATAATA--------------------------------------------ATAATGCACACTTTTAT i calJac3.chr3 C 0 I 69 s saiBol1.JH378129 6490112 467 - 25294431 TGATCTTTCTGTAACATTAGCAAATTTATTATGATCTGTTAT-----------AA-AAGACTGTGTGGCCTTCCTTGTTTCTACTTTCTCAACTCCCTAAGTATTAATTCAATCGAAAAGTAACTTCAGGTATGGGTCCAATTTAATTTCCCTCTAGAAGATCTACTGTGCCA---------TTAATtagaatcatataatcttagagccaaaaag----atccttagagattgtctcatcctattct---attaaagcatgaggaaatgggtttagcaatcttactaaggttacacaAATGC--A-AAAAACACTT-AGAAAGTTTTTAAAATC-----------AAACG--TATTAAACGATTGA-TGTTACtaattt-tt------t-------atgtataagaaaa-------tattaaat---------ctta-tttta---ta-----aaGTGATTCTGGTAATTTTAGTGAGTTCATAACAATGCTTCTAAATATTTCAAAACTTTAATTTATCATCCAAA----TATAATA--------------------------------------------ATAATACACACTTTTAT i saiBol1.JH378129 C 0 I 2086 s cebCap1.NW_016107420v1 4046692 511 - 6311556 TGATCTTTCTGTAACATTAGCAAATTTATTATGACCTGTTAT-----------AA-AATACTGTTTTGCCTTCCTTGTTTCTACTTTCTCAACTCCCTAAGTATTAATTCAATTGAAAAGTAACTTCAGGTATGGGTCCAATTTAATTTCCCTCTAGAAAATCTACTGTGCCA---------TTAATtagaatcatataatcttagagccaaaagg----atccttagagattgtctcatcctattct---attaatgcatgaggaaaTGGGTTTATCTATCTTACTAAGGTTACACAAATGC--A-AAAAACACAT-AGAAAGTTTTTAAAATC-----------AAAAG--TATAAAACAATTAA-TGTTACTAATTT-TT------T-------ATGTATAAGAAAT-------TATTAAAT---------CTTATTTTTA---TA-----AAGTGATTCTGGTAATTTTAATGAGTTCATAACAATGCTTCTAAATATTTCAAAACTTTAATTTATCATCCCAA----TATAATAATACACACTTTTATCAGGTTATAATATACATA-TTTATCAGGTTATAATACACACTTTTAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14902008 489 + 15034901 TGATCTTTCTGTAACATTAGCAAATTTATTATGATCTGTTAT-----------AA-AAGACTGTTTTTCCTTCCTTGTTTCTACTTTCTCAACTCCCTAAGTATTAATTCAATTGAAAAGTAACTTCAGGTATGGGTCTAATTTAATTTCCCTCTAGAAGATCTACTGTGCCA---------TTAATtagaatcatataatcttagagccaaaagg----atccttagagattgtctcatcctattcc---attaatgcatgaggaaatgggtttagcaatcttactaaggttacacaAATGC--AGAAAAACACAT-AGAAAGTTTTTAAAATC-----------AAAAG--TATAAAACAATTGA-TGTTACTAATTTGTG------T-------ATGTATAAGAAAA-------TATTAAAT---------CTTATTTTTA---TA-----AAGTGATTCTGGTAATTTTAATGAGTTCATAACAATACTTCTAAATATTTCAAAACTTTAATTTATCATGCAAA----TATAATA-------------------------ATATACACTTTATCAGGTTATAATACACATTTTTAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26307999 497 - 93316391 TGACCTTTCTATAACATTAGCAAATTTAGCATGATCTGTCAT----------AAA-AAGACTGTTTTGACTTTCTTGTTTTCACTTTCCCAAGTCTCTAAGTATTAATTCAATGAATAAGTAACTTCAGCTATAGGCCCAATTTAATTTCCCTCCTCAAGATATGCAGTGCAG---------TTAATtagaatcatataattgtagagcaaaaagg----atccttagagattgtctaatcctattct---atttatgcatgtggaaaTGGGTTTGGCAATCTTATTAAGGTCACAAAAATTC--A-AAAAACACAC-AGAAAGTACTTATGATAAAATCTAAATTAAAAG--TATAAAACAACTGG-TATTATTAATTTATT------T-------ATTCATAAGAAAA-------TATAAAATCTTTT-AAAATTATTTTTGACATA---TGAAGTTATTCTGGTAAATTTGATGAGTTCAGTACAGTGCTTCTAAATATTTCAGAAGTTTAATTTGTCATCAAAA-TATTATGATA--------------------------------------------AAAATACATACTTTTAT i micMur3.chr14 I 113 C 0 s otoGar3.GL873702 930294 509 - 3201129 TAACCTTTCTGTAACATTAGCAAATTTAGTATGATCTGTCATTAAAAAAAAAAAA-AAAACTGTTTTGATTTCCTTGTTTTCACTTTTCCAAGTGTCTCCGTATTAATTCAATGGATAAGTAACCTCAGCTATAGGCCCAATTTAATTTCCCTCCTCAAGATATGCAGTGCAG---------TTAATtagaatcatataattgtggagcaaaaagg----atccttagagattgtctaatcctattcc---atttatgcatgtggaaatggaTTTGGCAATAGTACTATGGCCACAAAATTAAAGA-AAAAGCACAT-AGAATGTTCTTATGATAAAAAGCAAACTAAAAG--TGTAAAACAGCTGa-tattattaattcatt------t-------atttatgagaaaa-------tattaaatcttttcaaaattatttttG-CCTA---TGAAGTGATTCTGGTAAGTTTAATGAGTTCAGAACAGTGCTTCTAAATATTTCAGAAGTTTAATTTGTCATCTAAA-TATTATGATA--------------------------------------------ATAATGCATACTTTAAT i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44024285 500 - 53741614 TGACCTTTCTATAATACTAGGAAATTTATTATGATCTATTGT-----------AAGAAAACTATTTTGCCTTTCTAGGTTCCACTCTCCCAACTCCCTAAGTATTAATTCTATGGGAAAGAAACTTCAGCTATAGTTGCAATTTAATTTCCCTGCTCAACATATGCAGTATAG---------TTAATtagaatcatataatcttagagcaaaaagg----atccttagagattgtctaatcctattctctcatttatgcatgtggaaatgggtttagcaatcttactaaggtcacacaAATTC--A-AAAAACACAT-AGAAAGTCTTTATGATAAAATGCAAATTAAAAG--TATAAAAC--TTAACTGTTATTAACTTATTTGTGAGT-------ATGTGTAAGGAAACTGTGTCTTTTAAA----------ATTATTTTTC-CTTA---TGATACAATTCTGGTAAGTTTAATGAGTACAGAACAATGTTTCTAAA---CTTCAAAGTTTGGTTTGTCattttaaataatataatg--------------------------------------------ataatacatatatttat i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1710462 508 + 5974691 TGATCTA-CTATAATATTAGCAAAGTTTTTAGGTTCTGTCGT-----------AAGAAGAATG--TTGTCTTCCTTGGTCCCACTTTCCCAACTTCCTAAGTATTAATTCGGTGAAAATGTAACCTCAGCTGTAGTTCCAACTTAATTTCCCTGCCCATAATATGCAGTACAATTAATTCAGTTaattataatcatgtaatcttagagaaaaaaagaagtatccttagagattgtctaatcctgctttctcacttttacCTGTAGAAATAGATTTACCAATCTTGCCAAGGTGACACAAATTC--A-AAAGACACATAAGAATGTCTTTATGGCAATGTGaaaattaaaag--tataaaatt------tattattaatttatt------tattttaaatatttaaagaaa-------tataaaac--atttaaaattaattttC---TAAAATGAAGTGATTCTGGTAAATTTAGTGACTTCAGAATATTGTTTCTCAGTGTTTCAAAA-TTTAATTTGTTTTCTGAT----TAAGAAG--------------------------------------------ATAATACCTACTTTTAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=57124.000000 s hg38.chr9_KI270719v1_random 30711 4 + 176845 AAGT s panTro5.chr4 135055475 4 + 194502333 AAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36030 4 - 70559 AAGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449609 4 - 115148730 AAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391699 4 + 190429646 AAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910701 4 + 189454096 AAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902026 4 - 40319822 AAGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4455813 4 - 9219162 AAGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981027 4 + 135778131 AAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747680 4 - 3013352 AAGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5978935 4 + 8656713 GAGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407180 4 - 190850796 AAGT i calJac3.chr3 I 69 C 0 s saiBol1.JH378129 6492665 4 - 25294431 AAGT i saiBol1.JH378129 I 2086 C 0 s cebCap1.NW_016107420v1 4047203 4 - 6311556 AAGT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14902497 4 + 15034901 AAGT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26308496 4 - 93316391 AAGT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 930803 4 - 3201129 AAGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44024785 4 - 53741614 aaGT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1710970 4 + 5974691 AAAT i dasNov3.JH569232 C 0 I 1672 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=-4398.000000 s hg38.chr9_KI270719v1_random 30715 3 + 176845 ----GAG-- s panTro5.chr4 135055479 3 + 194502333 ----GAG-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36034 3 - 70559 ----GAG-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449613 7 - 115148730 GACAGAG-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391703 7 + 190429646 GACAAAG-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910705 7 + 189454096 GACAAAG-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902030 7 - 40319822 GACAAAG-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4455817 7 - 9219162 GACAAAG-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981031 7 + 135778131 GACATAG-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747684 7 - 3013352 GACAAAG-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5978939 7 + 8656713 GACAAAG-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407184 3 - 190850796 AAT------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6492669 3 - 25294431 TAT------ i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4047207 3 - 6311556 GAC------ i cebCap1.NW_016107420v1 C 0 I 36 s aotNan1.NW_018507635v1 14902501 3 + 15034901 GAC------ i aotNan1.NW_018507635v1 C 0 I 4 s micMur3.chr14 26308500 7 - 93316391 GGCAGGG-- i micMur3.chr14 C 0 I 1 s otoGar3.GL873702 930807 7 - 3201129 GGCAGGG-- i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44024789 9 - 53741614 AGCAGGGGT i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1710974 1672 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=94991.000000 s hg38.chr9_KI270719v1_random 30718 11 + 176845 TCTTCTACAGT s panTro5.chr4 135055482 11 + 194502333 TCTCCTACAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36037 11 - 70559 TCTTCTACAGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449620 11 - 115148730 TCTTCCACAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391710 11 + 190429646 TCTTCTATAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910712 11 + 189454096 TCTTCTATAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902037 11 - 40319822 TCTTCTATAGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4455824 11 - 9219162 TCTTCTACAGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981038 11 + 135778131 TCTTCTACAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747691 11 - 3013352 TCTTCTACAGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5978946 11 + 8656713 TCTTCTACAGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407187 11 - 190850796 TTTCCTATAAT i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6492672 11 - 25294431 TTTCCTATAAT i saiBol1.JH378129 C 0 I 2 s aotNan1.NW_018507635v1 14902508 11 + 15034901 TCTGCTTTTAT i aotNan1.NW_018507635v1 I 4 I 43 s micMur3.chr14 26308508 11 - 93316391 TCTTCCATAGT i micMur3.chr14 I 1 C 0 s otoGar3.GL873702 930815 11 - 3201129 TCTTCTCTGGT i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44024798 11 - 53741614 TTCTCTACAGT i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1710974 1672 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e cebCap1.NW_016107420v1 4047210 36 - 6311556 I a score=488816.000000 s hg38.chr9_KI270719v1_random 30729 49 + 176845 GAAAATTACTAATTATAGGAAAGAG--AAAATCATGGATAAATAGGGTTGT s panTro5.chr4 135055493 49 + 194502333 GAAAATTACTAAGTATAGGAAAGAG--AAAATCATAGATAAATAGGGTTGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36048 49 - 70559 GAAAATTACTAATTATAGGAAAGAG--AAAATCATAGATAAATAGGGTTGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449631 49 - 115148730 GAAAATTACTAATTATAAGAAAGAG--AAAATCCTAGATATATAGTGTTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391721 49 + 190429646 AAAAATTAATAATTATAGGAAAGGG--AAAATCATAGATATATAGGGTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910723 49 + 189454096 AAAAATTACTAATTATAGGAAAGGG--AAAATCATAGATATATAGGGTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902048 49 - 40319822 AAAAATTACTAATTATAGGAAAGGG--AAAATCATAGATATATAGGGTTGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4455835 49 - 9219162 AAAAATTACTAATTATAGGAAAGGG--AAAATCATAGATATATAGGGTTGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981049 49 + 135778131 AAAAATTACTAATTATAGGAAAGGG--AAAATCATAGATATATAGGGTTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747702 49 - 3013352 AAAAATTACTAATTATAGGAAAGGG--AAAATCATAGATATATAGGGTTGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5978957 49 + 8656713 AAAAATTACCAATTATAGGAAAGGG--AAAATCATAGATATATAGGGTTGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407200 50 - 190850796 GAAAATTACTAATTACAAAAAAGAG-AAAAATCACAGATGTGTAGGGTTTT i calJac3.chr3 I 2 C 0 s saiBol1.JH378129 6492685 51 - 25294431 GAAAATTACTAATTATAGAAAAGAGAAAAAATCATAGATGTGTAGGGTTTT i saiBol1.JH378129 I 2 C 0 s cebCap1.NW_016107420v1 4047246 50 - 6311556 GAAAATTACTAATTACAGAAAAGAG-AAAAATCATAGATATGTAGGGTTTT i cebCap1.NW_016107420v1 I 36 C 0 s aotNan1.NW_018507635v1 14902562 50 + 15034901 GAAAATTACTAATTACAGAAAAGAG-AAAAATCATAGACGTGTAGGGTTTT i aotNan1.NW_018507635v1 I 43 C 0 s micMur3.chr14 26308519 49 - 93316391 GGAAATTATTCATTAGCAGAAAGGC--AAAATCATAGACACTCAGGATTGC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 930826 49 - 3201129 GGAAATTATTCATTAATAGGAAGGG--AAAACCATAGACCCTCAGCATTTC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44024809 49 - 53741614 GGAAATTATTAATTATGGGGAAGGG--AAAATCATAGACCCCTGGAGTTAT i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1710974 1672 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=662562.000000 s hg38.chr9_KI270719v1_random 30778 54 + 176845 ATCAAACTCTTAAAATGTACATGTGGAAATTTAAAAATATCCTCTTGCCAAGGG s panTro5.chr4 135055542 54 + 194502333 ATCAAACTCTTAAAATGTACATGTGGAAATTTAAAAATATCCTCTTGCCAAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36097 54 - 70559 ATCAAACTCTTAAAATGTACATGTGGAAATTTAAAAATATCCTCTTGCCAAGGG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449680 54 - 115148730 ATCAAACTCTTAAAATGTACGTGTGGAAATTTAAAAATATCCTCTTGACAAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391770 54 + 190429646 ATCAAACTCTTAAAATGTACATGTGGAAATTTAAAAATATACTCTTGCCAAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910772 54 + 189454096 ATCAAACTCTTAAAATGTACATGTGGAAATTTAAAAATATACTCTTGCCAAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902097 54 - 40319822 ATCAAACTCTTAAAATGTACATGTGGAAATTTAAAAATATACTCTTGCCAAGGG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4455884 54 - 9219162 ATCAAACTCTTAAAATGTACATGTGGAAATTTAAAAATATACTCTTGCCAAGGG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981098 54 + 135778131 ATAAAACTCTTAAAATGTACATGTGGAAATTTAAAAATATCCTCTTGCCAAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747751 54 - 3013352 ATCAAACTCTTAAAATGTACACGTGGAAATTTAAAAATATACTCTTGCTAAGGG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979006 54 + 8656713 ATCAAACTCTTAAAATGTACGTGTGGAAATTTAAAAATATCCTCTTGCCAAGGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407250 53 - 190850796 ATCAAACTCTTAAAATGTATGTGT-AAAATTTAAAAATATCTTCTTGCAAAGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6492736 54 - 25294431 ATCAAACTCTTAAAATGTATGTGTAAAAATTTAAAAATATCTTCTTGCCAAGGG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4047296 54 - 6311556 ATCAAACTCTTAAAATGTACGTGTAAAAATTTAAAAATATGTTCTTGCCAAGGG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14902612 54 + 15034901 ATCAAACTCTTAAAATGTACGTGTAAAAATTTAAAAATATCTCCTTGCCAAGGG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26308568 53 - 93316391 ATGAAACTCTCAAAATGCATATGTGGAG-TTAAAAACTATCTTCTTGCCAAGGG i micMur3.chr14 C 0 I 85 s otoGar3.GL873702 930875 54 - 3201129 ATGAAACTTTCAAAATGCACATGTGGAGATTAAAACCTGTCTTCTTGCCTAAGG i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44024858 54 - 53741614 AGCAAATTCTTGAAATGCACATGTGCAGGTTGAAAAATATCTTCTTGCTGAAGG i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1712646 54 + 5974691 ATCAAACTCCCTAAATGTACACATATAGTTTGAAAAATATCTTCTTGCAAAGGT i dasNov3.JH569232 I 1672 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=861121.000000 s hg38.chr9_KI270719v1_random 30832 103 + 176845 GATGTTGATGTCATTCCATAACA-GGATTGACATGTGTAATTAAAACAAACAATAAAAATTAAGAATATATAAATAATA--TTTT----AAATGCTTGAATTTGTTATTT s panTro5.chr4 135055596 103 + 194502333 GATGTTGATGTCATTCCATAACA-GGATTGACATGTGTAATTAAAACAAACAACAAAAATTAAGAATATATAAATAATA--TTTT----AAATGCTTGAATTTGTTATTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36151 103 - 70559 GATGTTGATGTCATTCCATAACA-GGATTGACATGTGTAATTAAAACAAACAACAAAAATTAAgaatatataaataata--tttt----aaatgcttgaatttgttattt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449734 103 - 115148730 GATGTTGATGTCATTCCATAACA-GGATTGACATGTGTAATTAAAACAAACAACAAAAATTATGAATTTATAAATAATA--TTTT----AAATGCTTGAATTTTTTATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391824 102 + 190429646 GATGTTGATGTCATTCCATAACAGGGATTGACATGT--AATTAAAACAAACAGCAAAAATTACGAATTTATAAATAAAA--TTTT----AAATGCCTGAATTTATTATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910826 101 + 189454096 GATGTTGATGTCATTCCATAACA-GGATTGACATGT--AATTAAAACAAACAGCAAAAATTACGAATTTATAAACAAAA--TTTT----AAATGCCTGAATTTATTATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902151 101 - 40319822 GATGTTGATGTCATTCCATAACA-GGATTGACATGT--AATTAAAACAAACAGCAAAAATTATGAATTTATAAATAAAA--TTTT----AAATGCCTGAATTTATTATTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4455938 101 - 9219162 GATGTTGATGTCATTCCATAACA-GGATTGACATGT--AATTAAAACAAACAGCAAAAATTACGAATTTATAAATAAAA--TTTT----AAATGCCTGAATTTATTATTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981152 103 + 135778131 GATGTTGATGTCATTCCATAACG-GGATTGACATGTGCAATGAAAACAAACAGCAAAAATTACGAATTTATAAATAAAA--TTTT----AAATGCCTGAATTTGTTATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747805 101 - 3013352 GATGTTGATGTCATTCCATAACG-GGATTGACATGT--AATTAAAACAAACAGCAAAAATTACGAATTTATAAATAAAA--TTTT----AAATGCCTGAATTTATTATTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979060 103 + 8656713 GATGTTGATGTCATTCCATAATG-GGAATGACATGTGCTATTAAAACAAACAGCAAAAATTATGAATTTATAAATACAA--TTTT----AAATGCCTGAATTTGTTATTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407303 100 - 190850796 GATGCTGATATCATTCCATAATG-GGGTTGACATGTGTAATTAAAAC-AACA--AAAAATTACTAATTTACAAATAATA--TTTT----AAATGCCTGAATTTTTTATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6492790 100 - 25294431 GATGCTGATATCATTCCATAATG-GGGTTGACATGTGTAATTAAAAC-AACA--AAAAATTACTAATTTACAAATAACA--TTTT----AAATTCTTGAATTTGTTATTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4047350 100 - 6311556 GATGCTGATATCATTCCATAATG-GGGTTGACGTGTGTAATTAAAAC-AACA--AAAAATTACTAATTTACACATAATA--TTTT----AAATGCCTGAATTTGTTATTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14902666 100 + 15034901 GATGCTGTTATCATTCCATAATG-GGGTTGACATGTGTAATTAAAAC-AACA--AAAAATTACTAATTTACAAATAATA--TTTT----AAATGCCTGAATTTGTTATTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 930930 94 - 3201129 GATTTTAACACCACCCCATAATA-AGACTGACCTTTGAAATTAAAACAACCACCAGTGATGGATAA---------AGAG--TTTT----CAACACTTGAATTTATTACTT i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44024913 80 - 53741614 AATTCTGATACCACCTGCCAATA-GGTTTG--------AAT-------------AAAACTCCCAGACTTATAAATAATGATTTTT----AAATTCCTGAA-TCACTA--- i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1712700 95 + 5974691 AGTTCTGATGCCACCCTGTAATG-GAATTGAGCTCTGCAGTTAAAAC-------AAAAATCATG-ATTCATAAATAGTG--ATTTCTTAAAGCACCTGATTTATTT---- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26308621 85 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1143600.000000 s hg38.chr9_KI270719v1_random 30935 106 + 176845 ATAATGAATATTGAAATTTATTTAGTGAGATAAAAGGTTAACAAATTCTTGAATATAATTATACTA-CTTT-TATAATAAAATGCATCCAAGCTGAAATCTCACTTCT s panTro5.chr4 135055699 106 + 194502333 ATAATGAATATTGAAATTTATTTAGTGAGATAAAAGGTTAACAAATTCTTGAAAATAATTATACTA-CTTT-TATAATAAAATGCATCCAAGCTGAAATCTCACTTCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36254 106 - 70559 ataatgaatattgaaattTATTTAGTGAGATAAAAGGTTAACAAATTCTTGAATATAATTATACTA-CTTT-TATAATAAAATGCATCCAAGCTGAAATCTCACTTCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449837 97 - 115148730 ATAATGAATATTGAA----ATTTAGTGAGATAAAAGGTTAACAA-----TGAATATAATCATACTA-CTTT-TATAATAAAATGCATCCAAGCTGAGATCTCACTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131391926 106 + 190429646 ATAATTAATATTGAAATTTATTTAGTGAGATAAAAGGTTAAGAAATTCTTGAATATAATTATACTA-CTTT-TATAATAAAAGGCATCCAAGCTAAAATCTCACTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130910927 106 + 189454096 ATAATGAATATTGAAATTTATTTAGTGAGATAAAAGGTTAAGAAATTCTTGAATATAATTATACTA-CTTT-TATAATAAAATGCATCCAAGCTAAAATCTCACTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902252 106 - 40319822 ATAATGAATATTGAAATTTATTTAGTGAGATAAAAGGTTAAGAAATTCTTGAATATAATTATACTA-CTTT-TATAATAAAATGCATCCAAGCTAAAATCTCACTTCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4456039 106 - 9219162 ATAATGAATATTGAAATTTATTTAGTGAGATAAAAGGTTAAGAAATTCTTGAATATAATTATACTA-CTTT-TATAATAAAATGCATCCAAGCTAAAATCTCACTTCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981255 106 + 135778131 ATAATCAATTTTGAAATTTATTTAGTGAGATAAAAGGTTAACAAATTCTTGAATATAATTATACTA-CTTT-TATAATAAAATGCATCCAAGCTAAAATCTCACTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2747906 106 - 3013352 ATAATGAATATTGGAATTTATTTAGTGAGATAAAAGGTTAAGAAATTCTTGAATATAATTATACTA-CTTT-TATAATAAAATGCATCCAAGCTAAAATCTCACTTCT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979163 106 + 8656713 ATAATGAATATTGAAATTTATTTAGTGAGGTAAAAGGTTAGCAAATTCTTGAATATAATTATACTA-CTTT-TATAATAAAATGCATCCAAGCTAAAATCTCACTTCT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407403 106 - 190850796 ATAGGGAGTATTGAAATTTGTTTAGTGAGATAAAAGGTTAACAAATTCTTGAATGTAATTATAATA-CTTT-TATAATAAAATGCATCCAAGCTAGTATctcacttgt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6492890 65 - 25294431 ATAAGGAGTATTGAGATTTGTTTAGTGAGATAAAAGGTTAACAAATTCTTGAA-------------------------------------------TATCTCACTTCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4047450 105 - 6311556 ATAGAGAGTATTGAAATTTGTTTAGTGAGATAAAA-TTTAACAAATTTTTGAACATAATTATAATA-CTTT-TATAATAAAATGCATCCAAGCTAATATCTCACTTCC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14902766 106 + 15034901 ATAGGGAGTATTGAAATTTGTTTAGTGAGATAAAAGGTTAACAAATTCTTGAATATAATTATAATA-CTTT-TATAATAAAATGCATCCAAGCTAATATctcacttct i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26308706 106 - 93316391 ATATTGAATATTGAAATTTATTTAATGAAATAAAATGGTAGCAAATTCTTGAATATAATTGTACTA-CTTT-TACAACAAAATGCATCAAAGCTAAAAActcacttct i micMur3.chr14 I 85 I 268 s otoGar3.GL873702 931024 103 - 3201129 ATCTTGA--ATTGAAATGTATTTACTGAAATAAAATGGCAGCAAATGAGTGAATATAATTATACTT-CTTT-TACCA-ACAATGCATCAAACCTACAAACTCCTCTCC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44024993 106 - 53741614 ATAAGAAATATT-AAACTTATTTAGTGAGGCAAAATGTTAACAAATCATTGaatataattttattattttt-tGCAATAAAATACATCAAATCTAACATCTCACTTCT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1712795 106 + 5974691 ATAATAAATATTGACACTTGTTTAGTGAAATAAAA-TTTAACAAAGTCTTGCATAGAATTTTGTTA-TTTGATACAATGTAATGTATAAAAGTTAATACCCCACTTCT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=467672.000000 s hg38.chr9_KI270719v1_random 31041 51 + 176845 GTTGTCAATTGCTTTGATGGTTCTAG--ACTCATTTccctat-ttttggtgagt s panTro5.chr4 135055805 51 + 194502333 GTTGTCAACTGCTTTGATGGTTCTAG--ACTCATTTCCCTAT-TTTTGGTGAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36360 51 - 70559 GTTGTCAACTGCTTTGATGGTTCTAG--ACTCATTTCCCTAT-TTTTGGTGAGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449934 51 - 115148730 GTTGTCAACTGCTTTGATGGTTCTAG--ACTCATTTCCCTAT-TTTTGGTCAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392032 51 + 190429646 GTTGTTAACTGCTTTGATGGTTCTAG--ACTCATTTCCCTAT-TTTTGGTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911033 51 + 189454096 GTTGTTAACTGCTTTGATGGTTCTAG--ACTCATTTCCCTAT-Ttttggtgagt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902358 51 - 40319822 GTTGTTAACTGCTTTGATGGTTCTAG--ACTCATTTCCCTAT-Ttttggtgagt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4456145 51 - 9219162 GTTGTTAACTGCTTTGATGGTTCTAG--ACTCATTTCCCTAT-Ttttggtgagt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981361 51 + 135778131 GTTGTCAACTGCTTTGATGGTTCTAG--ACTCATTTCCCTAT-TTTTGGCGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748012 51 - 3013352 GTTGTTAACTGCTTTGATGGTTCTAG--ACTCATTTTCCTAT-TTTTGGTGAGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979269 51 + 8656713 GTTGTTAACTGCTTTGATGGTTCTAG--ACTCATTTCCCTAT-TTTTGGTGAGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407509 51 - 190850796 gatgccaactgtttagacggttctag--actcattttcctgt-ttcaggtgagt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6492955 51 - 25294431 GATGCCAACTGTTTAGATGGTTCTAG--ACTCATTTCCCTGT-TTCGGGTGAGT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4047555 51 - 6311556 AATGCCAACTGTTTAGATGGTTCTAG--ACTCATTTTCCTGT-TTCAGGTGAGT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14902872 51 + 15034901 gatgccaattgtttagatggttctag--actcatttttctgt-ttcaggtgagt i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 931127 53 - 3201129 -AAACCAGTCATTCTGACTGTTCCAGGTGCTCCCTCCCTCGTGTTTTGGTGCTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44025099 49 - 53741614 GATATAAACTGTTTTGATGGTTCTAA--G--AAACCCCCTAA-TTTTGATGATT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1712901 48 + 5974691 GGCCCCAAATGTTTCAGAAGTCCCAA--A---AACTCTCCAA-GTTTGCTAAGt i dasNov3.JH569232 C 0 I 9939 e micMur3.chr14 26308812 268 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=633392.000000 s hg38.chr9_KI270719v1_random 31092 77 + 176845 cataagatggatgacgcacatg-ctcaat-agcaggttatgttcatggctaaggtttatcatagcaaaaattacagagc s panTro5.chr4 135055856 77 + 194502333 CATAAGATggatgacgcacatg-cttaat-atcaggttattttcatggctaaggtttatcacagcaaaaactacagagc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36411 77 - 70559 CATAAGATGGATGACGCACATG-CTCAAT-AGCAGGTTATTTTCATGGCTAAGGTTTATCATAGCAAAAACTACAGAGC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90449985 77 - 115148730 CATAAGATGGATGACGCGCATG-CTCAAT-ATCAGGTTATTTTCATGGCTAAGGTTTATCATAGCAAAAACTAAAGAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392083 78 + 190429646 CAGAAGAAGGATGATGCACATGACTCAAA-ATCAGGTTATTTTCATGGCTAAGGTTTATTATAGCAAAAACTACAGAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911084 78 + 189454096 cagaagaaggatgatgcacatgactcaaa-atcaggttattttcatggctaaggtttattatagcaaaaactacagagc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902409 78 - 40319822 cagaagaaggatgatgcacatgactcaaa-atcaggttattttcatggctaaggtttattatagcaaaaactacagagc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4456196 78 - 9219162 ccgaagaaggatgatgcacatgactcaaa-atcaggttattttcatggctaaggtttattatagcaaaaactacagagc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981412 78 + 135778131 CATAAGAAGGATGATGCACATGACTCAAA-ATCAGGTTATTTTCATGGCTAAGGTTTATCATAACAAAAACTACAGAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748063 78 - 3013352 CAGAAGAagaatgatgcacatgactcaaa-atcaggttattttcatggctaaggtttattatagcaaaaactacagagc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979320 77 + 8656713 CATAAGAAAGATGATGCACATGACTCAAA-ATCAGGTTATTTTCATGGCTAAGGTTTATCATAGC-AAAACTACAGAGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407560 78 - 190850796 catacaaaggataacacacacgactcagt-atcaggttattgtcatggctaaggtttatcatagcaaaaaatacagatc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6493006 78 - 25294431 CATACAGAAGATGACACACCTGACTCAATAATCAGGTTGTTTTCATGGCTAAGG-TTATCATAGCAAAAAATGCAGAGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4047606 78 - 6311556 CATACGAAGGATGACACACCTGACTCAAT-ATCAGGTTATTGTCATGGCTAAGGTTTATCATAGCAAAAAATACAGAAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14902923 78 + 15034901 catacgaaggataacacacatgactcaat-atcaggttattttcatggctaaggtttatcatagcaaaaaatatagagc i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 931180 60 - 3201129 CATAAGGAGGCTGAGATACAAG-ATTAAT-ATCCAGGTATTGTTGTAGC-----------------AAAAATACAGAGC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44025148 59 - 53741614 CAT--------CAATACACTT---------ATCAGGTTATTCT-GTGGTTAAGTTTTATTACAGCAAAAG--AGAGAGT i canFam3.chr19 C 0 C 0 e micMur3.chr14 26308812 268 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1712949 9939 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1266930.000000 s hg38.chr9_KI270719v1_random 31169 144 + 176845 aaaaccagTTCTATTCATATTT--TT-AATAAATAG-TAAACTAATGATATCT---TGTTATTCCTATGCTTTGTCTATCA-----TACCTACACATAAATATAAGCAC------------TGGTAAGTTCTGGTTCTAAACATAGCTTATATATGAATGCCATAATC s panTro5.chr4 135055933 142 + 194502333 aaaaccagTTCTATTCATATTT--TT-AATGAGTAG-TAAACTAATGATATCT---TGTTATTCCTATGCTTTGTCTATCA-----TACCTACACATAAATATAAGTAC------------TGGTAAGTTCTGGTTCCAAACA--GCTTATATATGAATGCCATAATC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36488 144 - 70559 AAAACCAGTTCTATTCATATTT--TT-AATGAATAG-TAAACTAATGATATCT---TGTTATTCCTATGCTTTGTCTATCA-----TACCTACACATAAATATAAGCAC------------TGGTAAGTTCTGGTTCCAAACATAGCTTATATATGAATGCCATAATC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450062 144 - 115148730 AAAACCAGTTCTATTCATATCT--TT-AATGAATAG-TAAACTAATCATATCT---TGTTATTCCTATGCTTTGTCTATCA-----TACCTACACAGAAATATAAGCAC------------TGGTAAGGTCTGGTTCCAAACATAGCTTACATAGGAATGCCATAATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392161 154 + 190429646 AAAACCAGCTGTATTCATATTT--TT-AATGAATAGTTAAACTAATGATATCT---TGTTATTCCCATGCTTTGTCTATCA-----TACCTACACATAAATATAAGCACATTG---AAGTTCTGTAAGTTCTGCTTCCAAACATAGCTTACATATGAATGCCGTAATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911162 154 + 189454096 aaaaccagcTGTATTCATATTT--TT-AATGAATAGTTAAACTAATGATATCT---TGTTATTCCCATGCTTTGTCTATCA-----TACCTACACATAAATATAAGCACATTG---AAGTTCTGTAAGTTCTGCTTCCAAACATAGCTTACATATGAATGCCGTAATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902487 154 - 40319822 aaaaacagcTGTATTCATATTT--TT-AATGAATAGTTAAACTGATGATATCT---TGTTATTCCCATGCTTTGTCTATCA-----TACCTACACATAAATATAAGCACATTG---AAGTTCTGTAAGTTCTGCTTCCAAACATAGTTTACATATGAATGCCGTAATC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4456274 154 - 9219162 aaaaccagcTGTATTCATATTT--TT-AATGAATAGTTAAACTAATGATATCT---TGTTATTCCCATGCTTTGTCTATCA-----TACCTACACATAAATATAAGCACATTG---AAGTTCTGTAAGTTCTGCTTCCAAACATAGCTTACATATGAATGCCGTAATC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981490 154 + 135778131 AAAACCAACTGTATTCATATTT--TT-AATGAATAGTTAAACTAATGATATCT---TGTTATTCCCATGCTTTGTCTATCA-----TACCTACACATAAATATAAGCACACTG---AAGTTCTGTAAGTTCTGGTTCCAAACATAGTTTACATATGAATGCCGTAATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748141 154 - 3013352 aaaaccagcaGTATTCATATTT--TT-AATGAATAGTTAAACTAATGATATCT---TGTTATTCCCATGCTTTGTCTATCA-----TACCTACACATAAATATAAGCACATTG---AAGTTCTGTAAGTTCTGCTTCCAAACATAGCTTACATATGAATGCCGTAATC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979397 150 + 8656713 AAAACCAGCTGTATTCATATTT--TT-AATGAA----TAAATTAATGATATCT---TGTTATTCCCATGCATTGTCTATCA-----TATCTACCCATAAATATGAGCACATTG---AAGTTCTGTAAGTTCTGGTTCCAAACATAACTTACATATGAATGCCGTATTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407638 154 - 190850796 aaaaccagTTCTATTCATATTT--TT-AATGAATAGTAAAAATAATGATATCT---TTTTATTCATATGCATTGTTTATCA-----TACCAACACATAAATATAAGCACTTTG---AAGTTCTGTAAGTTTTAGTTTCAAACATAGCTTACATATGAAGGCCATAATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6493084 156 - 25294431 AAAACCAGTTTTATTCATATTT--TT-AATGAATAGTAAA---AATGATATCT---TTTTATTCATATGCATTGTTTATCATTATTTGCCAATACATAAATATAAGCACTTTG---AAGTTCTGTAAGTTTTAGTTTCAAACATAGCTTACATATGAAGGCCATAATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4047684 145 - 6311556 AAAACCAGTTCTATTCATATTT--TT-AATGAATAGTAAAAATAATGATATCT---TTTTATTCATATGCATTGCTTAACA-----TACCAACACATAAATATAAACACTTTG------------AAGTTTTAGTTTCAAACATAGCTTACATATGAAGGCCATAATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14903001 151 + 15034901 aaaaccagTTCTATTCATA-TT--TT-AATGAATAGTAAAAATAATG--ATTT---TTTTATTCATATGCATTGTTTATCA-----TACCAACACATAAATATCAGCACTTTG---AAGTTCTGTAAGTCTTAGTTTCAAACGTAGCTTACATATGAAGGCCATAATT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 931240 153 - 3201129 AAAACCAGTTCTATTCCCACTTTATT-AACAAATAGCAAAAATAAGGACTTTT---AAAAATTCATATATATTGCCGATCA-----CATTGATGTATAAGCTTTAGCACATTAATAAGGTTCTGTAAGCTCTAGTTCCAAA-----TTCACATATGAATGCC-CAATA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44025207 133 - 53741614 AACAACAATGCTAGTCCTACCTTATT-AATGGATAATAAAACAAATGATATAT---TTTTGTTCATATATATCATCTGTCA-----CATAGACAT---AATTTAAACATATTG---ATATTCC--------------------TGGTTCACATATGAATCATGCAATA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1722888 153 + 5974691 AAAAGTAGTTCTATTTCTACTT--TTAAATACATAGTAAAGTTAGTAATATATATATTTTATTCCTATATATTGCCTATTC-----CAAAAATATGCAAACTTAAAAATGTTG---TGGTTCTGTAAGTTCAAGCTCCAG-----GCTCACATATAAGTGGTATAATT i dasNov3.JH569232 I 9939 C 0 e micMur3.chr14 26308812 268 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1688320.000000 s hg38.chr9_KI270719v1_random 31313 183 + 176845 ATTCAATATGCATACATTAGCCTTGAATTTTGAAGATTAAAAATTG-TTTGTAAAACTATCTAGAAAA-AATTTATTATGATTACAGCCACTAT----T----AGGTTTCAAAAGGGTTCATCAGAAATCTCTGAGGTATATAATGGGGAAA--GA------ATATTTTGACTACCACTTTAACAGGTCTGCTATTTA------ATA s panTro5.chr4 135056075 183 + 194502333 ATTCAACATGCATACATTAGCCTTGAATTTTGAAGATTAAAAATTG-TTTGTAAAACTATCTAGAAAA-AATTTACTATGATTACAGCCACTGT----T----AGATTTCAAAAGGGTTCATCAGAAATCTCTGAAGTATATAATGGGGAAA--GA------ATATTTTGACTACCACTTTAACAGGTCTGCTATTTA------ATA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36632 182 - 70559 ATTCAACATGCATACATTAGCCTTGAATTTTGAAGATTAAAAA-TG-TTTGTAAAACTATCTAGAAAA-AATTTATTATGATTACAGCCACTAT----T----AGATTTCAAAAGGGTTCATCAGAAATCTCTGAGGTATATAATGGGGAAA--GA------ATATTTTGACTACCACTTTAACAGGTCTGCTATTTA------ATA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450206 174 - 115148730 ATTCAACATGCATACATTAGCCTTGAATTTTGAAGATTAAAAATTG-TTTGTTAAACTATCTAGAAAA-AAATTATTATGATTACAGCCACTAT----T----AGATTTCAAAAGGGTTCATCAGAAATCTCTGAGGTATATAATGGAGAAA--GA------ATATTTTGACT---------ACAGGTCTGCTATTTA------ATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392315 180 + 190429646 ATTCAACATGCATACATTGGCCTTGAATTTTGAAGATTAAAAATTG-TTTGTAAAACTATCTAGAACA-AATGTATCATGATTACAGCCACTAT----T----AGATTTCAAAAGGGTTCATCAGAAAGCTCTGAGGTATATAAAGGGGAAA--GA------ATATTTTGACTACCACTTTAACAGGTCTGCTATTTA--------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911316 180 + 189454096 ATTCAACATGCATACATTGGCCTTGAATTTTGAAGATTAAAAATTG-TTTGTAAAACTATCTAGAACA-AATGTATCATGATTACAGCCACTAT----T----AGATTTCAAAAGGGTTCATCAGAAAGCTCTGAGGTATATAACGGGGAAA--GA------ATATTTTGACTACCACTTTAACAGGTCTGCTATTTA--------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902641 180 - 40319822 ATTCAACATGCATACATTGGCCTTGAATTTTGAAGATTAAAAATTG-TTTGTAAAACTATCTAGAACA-AATGTATCATGATTACAGCCACTAT----T----AGATTTCAAAAGGGTTCATCAGAAAGCTCTGAGGTATATAACGGGGAAA--GA------ATATTTTGACTACCACTTTAACAGGTCTGCTATTTA--------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4456428 183 - 9219162 ATTCAACATGCATACATTAGCCTTGAATTTTGAAGATTAAAAATTG-TTTGTAAAACTATCTAGAACA-AATGTATCATGATTACAGCCACTAT----T----AGATTTCAAAAGGGTTCATCAGAAAGCTCTGAGGTATATAACGGGGAAA--GA------ATATTTTGACTACCACTTTAACAGGTCTGCTATTTAATA------ i cerAty1.NW_012000798v1 C 0 I 349 s chlSab2.chr7 78981644 180 + 135778131 ATTCAACATGCATATGTTAACATTGAATTTTGAAGATTAAAAATTG-TTTATAAAACTATCTAGAACA-AATGTATTATGATTATAGCCACTAT----T----AGATTTCAAAAGGGTTCATCAGAAAGCTCTGAGGTATATAACGGGGAAA--TA------ATATTTTGACTACCACTTTAACAGGTCTGCTATTTA--------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748295 180 - 3013352 ATTCAACATGCATACATTAGCCTTGAATTTTGAAGATTAAAAATTG-TTTGTAAAACTATCTAGAACA-AATGTATCATGATTACAGCCACTAT----T----AGATTTCAAAAGGGTTCATCAGAAAGCTCTGAGGTATATAACGGGGAAA--GA------ATATTTTGACTACCACTTTAACAGGTCTGCTATTTA--------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979547 183 + 8656713 ATTCAACATGCATACATTAGCCTTGAATTTTGAAGATTAAAAATTG-TTTGTAAAACTATCTAGAACA-AATGTATTATGATTACAGCCATTAT----T----AGATTTCAAAAGGGTTCATCAGAAAGCTCTGAGGTATATAACGGGGAAA--GA------ATATTTTGACTACCACTATAACAGGTCTGCTATTTA---ATA--- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129407792 175 - 190850796 ATTCAACATACAAACATTAGCCTTGAATTTCAAACATTATAAA-----TTGTAAAATGATGTAGTAAA-AAT-CATTAGGACTGCAACCACTAT----T----ACATTTCATAAAGGCCCATCAGAAATCTCTAGAGTATATAATGAGGAAA--GA------ATATTTTGACTACCACTTAAAGAGGCCAGCTATTTA--------- i calJac3.chr3 C 0 I 3 s saiBol1.JH378129 6493240 175 - 25294431 ATTCAACATGCATACATTAGCCCTGAATTTTGAAGACTAAAAA-----TTGTAAAACAATCTAGAAAA-AAT-CATTAGGACTGCAACCACTAT----T----ACATTTCATAAAGGTTCATCAGAAATCTCTAGAGTATGTAATGAAGAAA--GA------ATATTTTGACTATCAATTAAACAGGCCAGCTATTTA--------- i saiBol1.JH378129 C 0 I 3 s cebCap1.NW_016107420v1 4047829 175 - 6311556 attcaacatgcatacattagccttgaattttgaacattaaaaa-----ttgTAAAACAACCTAGAAAA-AAT-CATTAGGACTGCAACCACTAT----T----ACATTTCATAAAGGTTCATCAGAAATCTCTGGAGTATATAATGGGGAAA--GA------ATATTTTGACTACCACTTAAACAGGTCAGCTATTTA--------- i cebCap1.NW_016107420v1 C 0 I 3 s aotNan1.NW_018507635v1 14903152 175 + 15034901 ATTCAACATGCATACAGTAGCATTGAATTTTGAAGATTAAAAA-----TTGTAAAACAATCTAGAAAA-AAT-CATTAGGACTGCAAACACTAT----T----ACATTTCATAAAGGTTCATCAGAAATCTCTAGAGTATATAATGGGGAAA--GA------ATATTTTGACTACCACTTAAACAGGCCAACTATTTA--------- i aotNan1.NW_018507635v1 C 0 I 3 s micMur3.chr14 26309080 145 - 93316391 ATTCAACATGCATACATTAGTCTAGAATTTTGAAGATTAAAAATTG-TTTGTAAAACTACATAGAAAT-AATTCAAAAGGATTACAGCTACTAT----T-------------------------------------GTACATAATGGGGAAA--GA--------TACTTTGCTAACATTTTAACAAGTCAGCTCTTTA--------- i micMur3.chr14 I 268 I 3 s otoGar3.GL873702 931393 190 - 3201129 ATTCAACATGCATATGTTAGTCTAGAATTTTGAAGattaaaaattattttttaaaaCTATCTAGCAAT-AATCCCAAAGGATTACAGCCACTGT----TGTGTAGATTTCAATAGAGTCCATCTACATTCTCTGAGGTACATAACCGGGAAA--GGCCAACTTTTACCTGACTTGTTACTTAACAAGTCAGC-CTTTA--------- i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 44025340 175 - 53741614 ATTCAACATGCATGAAT----CTTGAATTTTGAAGGTTGAAAATT--TTTGTGAGATAATATAGGAAATAATTGGGAAGGATTATAACCACTATCTCAT----AAATTTGAAAAGAATTCTTCAAAATGCTCTGAGATACAT-ATAAGGAAA--AT------GTATTCTG----CTATTTTAACAAATCAGTTATGTA--------- i canFam3.chr19 C 0 I 3 s dasNov3.JH569232 1723041 147 + 5974691 ATTCAACATGTGCATATATACCATGAATTTTGAAAAACAAATA------------------TAAAAAA-AAC-----AATATTATTGCCATTAACCTAT----AGATATGGGAAGAGT---TTAGAGTTCTCTGAGGCATATTGTGTGGAAAATGA------ATTTTGTAACCATTTCTTAAAA----------------------- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=107838.000000 s hg38.chr9_KI270719v1_random 31496 9 + 176845 ATATTAGTT s panTro5.chr4 135056258 9 + 194502333 ATATTAGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36814 9 - 70559 ATATTAGTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450380 9 - 115148730 ATATTAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392495 9 + 190429646 ATATTAGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911496 9 + 189454096 ATATTAGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902821 9 - 40319822 ATATTAGTC i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 78981824 9 + 135778131 ATATTAGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748475 9 - 3013352 ATATTAGTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979730 6 + 8656713 ---TTAGTC i colAng1.NW_012114544v1 C 0 I 1 s calJac3.chr3 129407970 9 - 190850796 ATATTAGTT i calJac3.chr3 I 3 C 0 s saiBol1.JH378129 6493418 9 - 25294431 ATATTAGTT i saiBol1.JH378129 I 3 C 0 s cebCap1.NW_016107420v1 4048007 9 - 6311556 ATATTAGTT i cebCap1.NW_016107420v1 I 3 C 0 s aotNan1.NW_018507635v1 14903330 9 + 15034901 ATATTAGTT i aotNan1.NW_018507635v1 I 3 C 0 s micMur3.chr14 26309228 9 - 93316391 ATATTAGTT i micMur3.chr14 I 3 C 0 s otoGar3.GL873702 931586 9 - 3201129 ACATTAGTT i otoGar3.GL873702 I 3 C 0 s canFam3.chr19 44025518 9 - 53741614 ATATTAGTT i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1723188 9 + 5974691 ATATTAGCT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e cerAty1.NW_012000798v1 4456611 349 - 9219162 I a score=1232864.000000 s hg38.chr9_KI270719v1_random 31505 102 + 176845 TCTTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATATGCTGCATAATGCAAGGAAAACAAAAGCACCTGTAAATATTAC-----AGAAG s panTro5.chr4 135056267 102 + 194502333 TATTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATATGCTGCATAATGCAAGCAAAACAAAAGCACCTATAAATATTAC-----AGAAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36823 102 - 70559 TCTTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATATGCTGCATAATGCAAGCAAAACAAAAGCACCTGTAAATATTAC-----AGAAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450389 102 - 115148730 TCTTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATATGCTGCATAATGCAAGCAAAACAAAAGCACCtataaatattac-----agaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392504 102 + 190429646 TCTTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATGTGTTGCATAATGCAAGCAAAACAAAAGCACCTATAAACATTAC-----AGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911505 102 + 189454096 TCTTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATGTGTTGCATAATGCAAGCAAAACAAAAGCACCTATAAACATTAC-----AGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902830 102 - 40319822 TCTTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATGTGTTGCATAATGCAAGCAAAACAAAAGCACCTataaacattac-----agaag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4456960 102 - 9219162 TCTTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATGTGTTGCATAATGCAAGCAAAACAAAAGCACCTATAAACATTAC-----AGAAG i cerAty1.NW_012000798v1 I 349 C 0 s chlSab2.chr7 78981833 102 + 135778131 TATTTTAAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATGTATTCCATAATGCAAGCAAAACAAAAGCACCTATTAATATTAC-----AGAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748484 102 - 3013352 TCTTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATGTGTTGCATAATGCAAGCAAAACAAAAGCACCTataaacattac-----agaag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979737 102 + 8656713 CTTTTTTAAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATGTGTTGCATAATGCAAGCAAAACAAAAGCACCtataaatattac-----agaag i colAng1.NW_012114544v1 I 1 C 0 s calJac3.chr3 129407979 102 - 190850796 CCTTTTTGAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATATGTTACATAATGCAAACAAAACAAAAGCACCTATAAATATTAC-----AGAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6493427 101 - 25294431 CCTTTTTGAT-----------TGATGTTTCATGGCCATCCAGAATACTAGCTATAAAATCACATGTATTACATAATGCAAACAAAA-AAAAGCATCTATAAATATTAC-----AGAAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4048016 102 - 6311556 CCTTTTTGAT-----------TGATGTTTCATGGACATCCAAAATACTAGCTATAAAATCATATATGCTACATAATGCAAACAAAACAAAAGCACCTATAAATATTAC-----AGAAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14903339 102 + 15034901 CCTTTTTGAT-----------TGATGTTTCATGGACATCCAGAATACTAGCTATAAAATCATATATGTTACATAATGCAAACAAAACAAAAACACCTATAAATATTAC-----AGAAG i aotNan1.NW_018507635v1 C 0 I 569 s micMur3.chr14 26309237 102 - 93316391 CCTTTTTTAT-----------TGAGGTTTCATGGACATCCAGAATGCTAGCAATAAAATCATATCTGTTACACAATGCAAACAAAACAAAAGCACCTGTAAATATTAG-----AGAAG i micMur3.chr14 C 0 I 2 s otoGar3.GL873702 931595 100 - 3201129 CC-TTTCTAT-----------TGAAGTTTCATGGACACCAAGAATGTTATCAATAAAATCATATATGCCACACAATGCAAACAAAACACAAGCACCTATAAATATTAG-----AG-AG i otoGar3.GL873702 C 0 I 2 s canFam3.chr19 44025527 97 - 53741614 -CTTTTTTAT-----------CAAAGCTTTGTGGACAACTCTAATATTAGCTATAAAATCATACATATTATATAAT----ACAAAACAAAAGCATTTATAAATACTAT-----TAGAT i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1723197 114 + 5974691 -CTTTTTTATACAAATACACACAATGATACATACAAA---ATGATACAAATTATAAAATTGAATATGTTAGGAAATACAAAGAAAACTATATTACTTATAAATATTACTAGAAAAAAG i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=14973.000000 s hg38.chr9_KI270719v1_random 31607 5 + 176845 ----ACtat-- s panTro5.chr4 135056369 5 + 194502333 ----ACTAT-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36925 5 - 70559 ----ACtat-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450491 5 - 115148730 ----actat-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392606 5 + 190429646 ----ACtat-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911607 5 + 189454096 ----ACtat-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902932 5 - 40319822 ----actat-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457062 5 - 9219162 ----ACtat-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981935 5 + 135778131 ----ACtat-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748586 5 - 3013352 ----actat-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979839 5 + 8656713 ----actat-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408081 5 - 190850796 ----GTCAT-- i calJac3.chr3 C 0 I 4 s saiBol1.JH378129 6493528 5 - 25294431 ----GTCAT-- i saiBol1.JH378129 C 0 I 4 s cebCap1.NW_016107420v1 4048118 5 - 6311556 ----GTCat-- i cebCap1.NW_016107420v1 C 0 I 4 s micMur3.chr14 26309341 5 - 93316391 ----CTTGT-- i micMur3.chr14 I 2 I 1 s otoGar3.GL873702 931697 5 - 3201129 ----CTTGT-- i otoGar3.GL873702 I 2 I 1 s canFam3.chr19 44025625 2 - 53741614 -------AT-- i canFam3.chr19 I 1 I 3 s dasNov3.JH569232 1723311 11 + 5974691 ACAAAGAATTT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e aotNan1.NW_018507635v1 14903441 569 + 15034901 I a score=1023656.000000 s hg38.chr9_KI270719v1_random 31612 111 + 176845 acatgtatgtatatcattgccat-aaaataactatata----catat-atgtatat----a-------cacaca-----taATTGTTTTCACAACCATGATATTATTACTTACAAAAGCATGCAAATTTAGGG s panTro5.chr4 135056374 112 + 194502333 ACATGTGTGTATATCACTGCCAT-AAAATACCTATATA----CATATTATGTATAT----A-------CACACA-----TAATTGTTTTCACAACCATGATATTATTACTTACAAAAGCATGCAAATTTGGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 36930 111 - 70559 acatgtatgtatatcattgccat-aaaatacctatata----catat-atgtatat----a-------cacaca-----taATTGTTTTCACAACCATGATATTATTACTTACAAAAGCATGCAAATTTAGGG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450496 110 - 115148730 acatgtatgtatatcattgccat-aaaatacctatata----catat-atgtatat----a-------cacaca-----taATT-TTTTCACAACAATGATATTATTACTTACAAAAGTATGCAAATTTAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392611 110 + 190429646 acatgtatgtatatcattgccat-aaaatacatatata-----atat-acgtatat----a-------cacaca-----taATTGTTTTCACAACAATGATATTATTACTTACAAAAGTATGAAAATTTAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911612 110 + 189454096 acatgtatgtatatcattgccat-aaaatacatatata-----atat-acgtatat----a-------cacaca-----taATTGTTTTCACAACAATGATATTATTACTTACAAAAGTATGAAAATTTAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34902937 110 - 40319822 acatgtatgtatatcattgccat-aaaatacatatata-----atat-acgtatac----a-------cacaca-----taATTGTTTTCACAACAATGATATTATTACTTACAAAAGTATTAAAATTTAGGG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457067 110 - 9219162 acatgtatgtatatcattgccat-aaaatacatatata-----atat-acgtatat----a-------cacaca-----taATTGTTTTCACAACAATGATATTATTACTTACAAAAGTATGAAAATTTAGGG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78981940 110 + 135778131 atatgtatgtatatcattgccat-aaaatacatatata-----atat-atgtatat----a-------cacaca-----taATTGTTTTCACAACAATGATATTATTACTTACAAAAGTATGAAAATTTAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748591 110 - 3013352 acatatatgtatatcattgccat-aaaatacatatata-----atat-acgtatat----a-------cacaca-----taATTGTTTTCAAAACAATGATATTATTACTTACAAAAGTATGAAAATTTAGGG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979844 110 + 8656713 acatgtatgtatatcattgccat-aaaatacatatata-----gtat-atgtatat----a-------CACACA-----TGATTGTTTTCACAACAATGATATTATTACTTACAAAAGTATGAAAATTTAGGG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408090 107 - 190850796 GTATCTATGTATATCATTGCCAT-AAAATACATATATA--------T-ATGTATGT----T-------CACAAA-----TAATTGTTTTGACAAAAATAATATTATTGTTTACAAAAGTATGCACATTTATGG i calJac3.chr3 I 4 C 0 s saiBol1.JH378129 6493537 111 - 25294431 GTATCTATGCATATCATTGCCAT-AAAATACATATATA--------T-ATATATGTATACT-------CACAAA-----TAACTGTTTTGACAAAAATAACATTATTGTTTACAAAAGTATGCAAATTTATGG i saiBol1.JH378129 I 4 C 0 s cebCap1.NW_016107420v1 4048127 106 - 6311556 gtatctatgtatatcattgccat-aaaatacatatata--------t-atgtat-T----T-------CACAAA-----TAATTGTTTTGACAAAAATAATATTATCGTTTACAAAAGTATGCAAATTTATGG i cebCap1.NW_016107420v1 I 4 C 0 s aotNan1.NW_018507635v1 14904010 106 + 15034901 ACATTTATGTATATCATTACCAT-AAAATACATATATA--------T-ATGTATGT----T-------CACAAA-----TAATTGTTTTGACAAAAATAATATTATTGTTTAC-AAAGTATGCAAATTTATGG i aotNan1.NW_018507635v1 I 569 C 0 s micMur3.chr14 26309347 112 - 93316391 TTATGTATGTACATCATTGTCATGAAAATCTATATATGTACCTCTAT-ATGTATAT----A-------CACAAA-----TAATTGTTTTCATGGTCATAATATT----CTTACACAAGCATGCAAATTTAGGT i micMur3.chr14 I 1 C 0 s otoGar3.GL873702 931703 104 - 3201129 TTATGTATGTAGATCACGGCCATAAAAATCCATATAAA------TAT-ATACAGAT----A-------CACATG-----TAATTGTTTT-ATGGCAATTATATT----CTTACAC-AGTGTGCAAATTTAGAT i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44025630 106 - 53741614 TTCTATACCTATACCATTCCCAT-GAAAACAACACCCC----------CCCCACAC----A-------CAAATA-----TAATTGTTTTAATGAGAATGATTTTCTTACTTGTAAAAGTATGCGAATTTAAGC i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1723322 119 + 5974691 ATATATCTCTATATCACTGTCATGAGAACACATATGTA-----TTAT-ATATATAT----AATACATGTACAAAAACACTAAGTATTTTCATGCCA--TATCTAATACTCTAC--AATTATTCAAATACAGGG i dasNov3.JH569232 C 0 I 442 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=26996.000000 s hg38.chr9_KI270719v1_random 31723 2 + 176845 AG s panTro5.chr4 135056486 2 + 194502333 AG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 37041 2 - 70559 AG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450606 2 - 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392721 2 + 190429646 AG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911722 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903047 2 - 40319822 AG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457177 2 - 9219162 AG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982050 2 + 135778131 AG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748701 2 - 3013352 AG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979954 2 + 8656713 AG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408197 2 - 190850796 AG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6493648 2 - 25294431 AG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4048233 2 - 6311556 AG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14904116 2 + 15034901 AG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26309459 2 - 93316391 AG i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 931807 2 - 3201129 AA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44025736 2 - 53741614 AG i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1723441 442 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=656137.000000 s hg38.chr9_KI270719v1_random 31725 57 + 176845 ATGGCTAAATAAGTTATGGCTTTTTC--ATAAATTGTAAGCCTATTCATTATAAAATAT s panTro5.chr4 135056488 57 + 194502333 ATGGCTAAATATGTTATGGCTTTTTC--ATAAATTGTAAGCCTATTCATTATAAAATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 37043 57 - 70559 ATGGCTAAATAAGTTATGGCTTTTTC--ATAAATTGTAAGCCTATTCATTATAAAATAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450608 57 - 115148730 ATGGCTAAATAAATTATGGCTTGTTC--ATAAACTCTAAGCCTATTCATTATAAAATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392723 57 + 190429646 ATGGCTAAATAAGTTATGGCTTGTTC--ATAAGTTGTAAGCCTATTCATTGTAAAATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911724 57 + 189454096 ATGGCTAAATAAGTTATGGCTTGTTC--ATAAGTTGTAAGCCTATTCATTGTAAAATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903049 57 - 40319822 ATGGCTAAATAAGTTATGGCTTGTTC--ATAAGTTGTAAGCCTATTCATTGTAAAATAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457179 57 - 9219162 ATGGCTAAATAAGTTATGGCTTGTTC--ATAAGTTGTAAGCCTATTCATTATAAAATAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982052 57 + 135778131 ATGGCTAAATAAGTTATGGCTTGTTC--ATAAGTTGTAAGCCTATTCATTATAAAATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748703 57 - 3013352 ATGGCTAAATAAGTTATGGCTTGTTC--ATAAGTTGTAAGCCTATTCATTATAAAATAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5979956 57 + 8656713 ATGGCTAAATAAGTTATGGCTTGTTC--ATAAGTTGTAAGCCCATTCATTATAAAATAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408199 57 - 190850796 ATGGCTAAATAAGTAATGGCTCATTC--ATAAAACATAAGCTTATTCATTATAAAATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6493650 57 - 25294431 ATGGCTAAATAAGTAATGGCTCATTC--ATGAGACGTAAGTTTATTCATTATAAAATAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4048235 57 - 6311556 ACAGCTAAATAAGTAATGGCTCATTC--ATAAGATGTAAGTTTATTCGTTATAAAATAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14904118 57 + 15034901 ATGGCTAAATAAGTAATGGCTCTTTC--ATAAGATGTAAGTTTATTTCTTATAAAATAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26309461 57 - 93316391 ATGGCTAAATAAATTATAGCTTACTC--ATAAGATGCATGCCAATTGATTGTAAAATAC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 931809 59 - 3201129 ATGGCTAAATAAATTATAGCTCATTCATATAAGATGTATGCCAATTCATTTAAAAATAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44025738 57 - 53741614 ATGGTTAAATAAATTATGGTTCGTTC--ATAAAATGACCACATGCTTATAATAAAATAT i canFam3.chr19 C 0 I 221 s dasNov3.JH569232 1723883 57 + 5974691 aTATCTAGATATATTAAAGTTTATTC--ATATGGTGCATTTGCATCCATTATAAAATGT i dasNov3.JH569232 I 442 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=314571.000000 s hg38.chr9_KI270719v1_random 31782 35 + 176845 ---TATTGAGGATCAACTttcatttgttccccaacaaa s panTro5.chr4 135056545 35 + 194502333 ---TATTGAGGATCAACTttcatttgttccccaacaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 37100 35 - 70559 ---TATTGAGGATCAACTttcatttgttccccaacaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450665 35 - 115148730 ---TATTGAGGATCAACTttcatttgttccacaacaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392780 35 + 190429646 ---CACTGAGTATCAACTttcatttgttccgcaacaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911781 35 + 189454096 ---CACTGAGTATCAACCttcatttgttccgcaacaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903106 35 - 40319822 ---CACTGAGTATCAACTttcatttgttccgcaacaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457236 35 - 9219162 ---CACTGAGGATCAACTttcatttgttttgcaacaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982109 35 + 135778131 ---TACTGAGGATCAACTttcattttttccacaacaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748760 35 - 3013352 ---CACTGAGGATCAACTttcatttgtttcgcaacaaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980013 35 + 8656713 ---TACTGAGGATCAACTttcatttgttccacaacaaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408256 35 - 190850796 ---TATTGGGGATCAATTtccatttgttccacaacaaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6493707 35 - 25294431 ---TCTTGAAGATCAACTtccatttgttccacgacaaa i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4048292 35 - 6311556 ---TATTGAGGATCAACTtccatttgttccacaacaaa i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14904175 35 + 15034901 ---TATTGAGGATCAACTtccatttgctccacaacaaa i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26309518 35 - 93316391 ---TATCAATGATCATTTCttatttgttccataaaacg i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 931868 32 - 3201129 ---TTTTGATGATCATTTttcatttgttccacaaa--- i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1723940 23 + 5974691 TACTACTGAAGA-AATTTTTCATG-------------- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44025795 221 - 53741614 I a score=4712897.000000 s hg38.chr9_KI270719v1_random 31817 441 + 176845 ttattgagc-atctactatgtatattctaggcccatttctagggactg--ggga-aaaaatagtgaaaataacattcagaatgtcttggcttcacagagctgttgttccagtgttgggagaaaaacagtaattaataccacaaagtatcatgtg-ttgtatgccagatggt-ttaagttctattct--aaaaaa-tgtggcaaagaaggggaatagagagttctgggcacaagag-gtgctggatactgaacaagatggttgctgaaagcctcactgggtggtatcatctgaatacaatga-gtg---gttatgagagaatgagc----caagagcataattgagagaa------------------------------------catattttcagggagcagaaatagcaaatgaggccttggtgtatgaacgcacccatgaggttcc-----actaaggatgccaatgtgatacagcagaggagatgaggtcacactc s panTro5.chr4 135056580 441 + 194502333 ttattgagc-atctactatgtatattctaggcccatttctagggactg--ggga-aaaaatagtgaaaataacattcagaatgtcttggcttcatagagctgttgttccagtgttgggagaaaaacagtaattaataccacaaagtatcatgtg-ttgtatgccagatggt-ttaagttctattct--aaaaaa-tgtggcaaagaagaggaatagagagttctgggcacaagag-gtgctggatactgaacaagatggttgctgcaagcctcactgggtggtatcatctgaatacaatga-atg---gttatgagagaatgagc----caagagcataattgagagaa------------------------------------catatttttggggagcagaaatagcaaatgaggccttggtgtatgaatgctcccatgaggttcc-----actaaggatgccggtgtgatacagcagaggagatgaagtcacactc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 37135 441 - 70559 ttattgagc-atctactatgtatattctaggcccatttctagggactg--ggga-aaaaatagtgaaaataacattcagaatgtcttggcttcacagagctgttgttccagtgttgggagaaaaacagtaattaataccacaaagtatcatgtg-ttgtatgccagatggt-ttaagttctattct--aaaaaa-tgtggcaaagaaggggaatagagagttctgggcacaagag-gtgctggatactgaacaagatggttgctgaaagcctcactgggtggtatcatctgaatacaatga-atg---gttatgagagaatgagc----caagagcataattgagagaa------------------------------------catattttcagggagcagaaatagcaaatgaggccttggtgtatgaacgcacccgtgaggttcc-----actaaggatgccaatgtgatacagcagaggagatgaggtcacactc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90450700 435 - 115148730 ttattgagc-atctactatgtatattccaggcccatttctagggactg--ggga-aaaagcagtgaaaa------tccgaatgtcttggcttcatagagctgttgttccagtgttgggagaaaaacaataattaataccacaaagtatcatatg-ttgtatgccagatggt-ttaagttctattct--aaaaaa-tgtggcaaagaaggggaatagagagttctgggcacaagag-gtgctggatactgagcaagatggttgctgaaagcctcactgggtggtatcatttggatacaatga-atg---gttatgagagaatgagc----caagagcaaaactaagagaa------------------------------------catattttcagggagcagaaatagcaaatgaggccttagtgtatgaatgcacccgtgaggttcc-----actaaggatgccaatgtgatacagcagaggagatgaggtcacactc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131392815 437 + 190429646 ttattgagc-atctactatgtatattctaggcccatttctagggactg--ggga-aaaagcagtgaaaataacattcggaatgtcttggcttcatagagctgttgttccagtgctgggagaaaaacaataattaataccacaaagtatcatgtg-ttgtatgccagatggt-ttaagttcta------aaaaaa-tatggcaaagaaggggaatagagagttctgggcacaagag-gtgctggatactgaacaagatggctgctgaaagcctcatggggtggtataattcgaatacaatga-atg---gttatgagagaatgaga----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgaggccttggggtatgaatgcacccatgacgttcc-----acggaagatgccattgtgatagagcagaggagatgaggttgcactc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130911816 442 + 189454096 ttattgagc-atctactatgtatattctagagccatttctagggactg--ggga-aaaagcagtgaaaataacattcggaatgtcttggcttcatagagctgttgttccagtgctgggagaaaaacaataattaataccacaaagtatcatgtg-ttgtatgccagatggt-ttaagttctattct-aaaaaaa-tatggcaaagaaggggaatagagagttctgggcacaagag-gtgctggatactgaacaagatggctgctgaaagcctcatggggtggtataattcgaatacaatga-atg---gttatgagagaatgaga----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgaggccttggggtatgaatgcacccgtgacgttcc-----acggaagatgccattgtgatagagcagaggagatgaggttgcactc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903141 442 - 40319822 ttattgagc-atctactatgtatattctaggcccatttctagggactg--ggga-aaaagcagtgaaaataacattcggaatgtcttggcttcatagagctgttgttccagtgctgggagaaaaacaataattaataccacaaagtatcatgtg-ttgtatgccagatggt-ttaagttctattct-taaaaaa-tatggcaaagaagggaaatagagagttctgggcacaagag-gtgctggatactgaacaagatggctgctgaaagcctcatggggtggtataattcgaatacaatga-atg---gttatgagagaatgaga----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgaggccttggggtatgaatgcacccgtgacgttcc-----acggaagatgccattgtgatagagcagaggagatgaggttgcactc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457271 443 - 9219162 ttattgagc-atctactatgtatattctaggcccatttctagggactg--ggga-aaaagcagtgaaaataacattcggaatgtcttggcttcatagagctgttgttccagtgctgggagaaaaacaataattaataccacaaagtatcatgtg-ttgtatgccagatggt-ttaagttctattctaaaaaaaa-tatggcaaagaagaggaatagagagttctgggcacaagag-gtgctggatactgaacaagatggctgctgaaagcctcacggggtggtataattcgactacaatga-atg---gttatgagagaatgaga----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgaggccttggggtatgaatgcacccgtgacgttcc-----acggaggatgccaatgtgatagagcagaggagatgaggttgcactc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982144 440 + 135778131 ttattgagc-atcttctatgtatattctaggcccatttctagggactg--tgga-aaaggcagtgaaaataacatttggaatgtcttggcttcatagagctgttgttccagtgctgggagaaaaacaataattaataccacaaagtatcatgtg-ttgtatgccagatggt-ttaagttctattct-aaaaaaa-tatggcaaagaaggggaatagagagttctgggcacaagag-gtgctggatactgaacaagacggttgctgaaagccccacagggtggtataattcgaatacaatga-atg---gttatgagagaatgaga----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgaggccttggggtatgaatgcacccgtgacgttcc-----acgaaggatgccaatgtgatagagcagaggagatgaggttg--ctc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2748795 443 - 3013352 ttattgagc-atctactatgtatattctaggcccatttctagggactg--ggga-aaaagcagtgaaaataacattcggaaggtcttggcttcatagagctgttgttccagtgctgggagaaaaacaataattaataccacaaaatatcatgtg-ttgtatgccagatggt-ttaagttctattctaaaaaaaa-tatggcaaagaagaggaatagagagttctgggcacaagag-gtgctggatgctgaacaagatggctgctgaaagcctcacggggtggtataattcgactacaatga-atg---gttataagagacagaga----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcacatgaggccttggggtatgaatgcacccgtgacgttcc-----acggaggatgccaatgtgatagagcggaggagatgaggttgcactc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980048 442 + 8656713 ttattgagc-atctactatgtatattctaggcccatttctagggactg--ggga-aaaagcagtgaaaataacattcggaatatcttggcttcatagagctgttgttccagtgctgggagaaaaacaataattaataccacaaaatatcatgtg-ttgtatgccagatggt-ttaagttctattct-aaaaaaa-tatggcaaagaagggaaatagagagttctgggcacaagag-gtgctggatactgaacaagatggttgctgaaagcctcacggggtgctataattcgaatacaatga-atg---gttatgagagaatgaga----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgaggccttggggtatgaatgcacccgtgacgttcc-----acggaggatgccaatgtgatagaacagaggagatgaggttgcgctc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408291 440 - 190850796 ttattgggc-atctactatgtatgttctaggcccatttctaggaactg--ggga-aaaagcagtgaaaataatattcagaatgtcttgatttcatagagctgttgttccagtattgggagaaaaacaattattaataccacaaagtataatgtg-ttgtttgccagatggt-ttaagttctattag--aaaaaa-tgtggcaaagaaggggaatagagagttctgagcacaagag-ctgttggatactgaacaagatggttgctgaaagcctcactgggtggtatcatttgaatacaatga-atg---gttatgagagaatgagc----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgtggccttggggtgtgaataca-ccacgatgttcc-----actaagagtgccagtatgatagagcagaggagatgagatcagaccc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6493742 440 - 25294431 ttattgggc-atctactatgtatgttctaggcccatttctagggactg--ggga-aaaagcagtgaaaataatattcagaatgtcttgattttatagagctgttgttccagtattgggagaaaaacaattattaataccacagagtataatgtg-ttgtttgccagatggt-ttaagttctgttct--aaaaaa-tgtggcaaagaaggagaatagagagttctgagcacaagag-atgttggatactgaacaagatggttgctgaaagcctcactgggtggtatcatttgagcacaatga-atg---gttatgagagaataagc----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgtggccttggggtatgaatgca-ccgtgatgttcc-----actaggagtgccagtatgatagagcaggggagatgagatcagactc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4048327 440 - 6311556 ttattgggc-atctactatgtatgttctaggcccatttctaggcactg--ggga-aaaagcagtgaaaataatattcagaatgtcttgatttcatagagctgttgttccagtactgggagaaaaacaattattaataccacagagtataatgtg-ttgtttgccaggtggt-ttaagttctattct--aaaaaa-tgtggcaaagaaggagaatagagagttctgagcacaagag-gtgttggatactgagcaagatggttgctgaaagcctcactgggtggtatcgtttgagtacaatga-atg---gttatgagagaatgagc----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgtggccttggggtatgaatgca-ctgtgatgttcc-----gctaagagtgccagtatgatagagcaggggagacgagatcagaccc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14904210 438 + 15034901 ttattgggc-atccattatgtatgttctaggcccatttctagggactg--ggg--aaaagcagtgaaaataatattcagaatgtcttgatttcatagagcta-tgttccagtattgggagaaaaacaattattaataccacaaagtataatgtg-ttgtttgccagatggt-ttaagttctattct--taaaaa-tatggtaaagaaggggaatagagagttctgagcacaagag-gtgttggatactgaacaagatggttgctgaaagcctcactgggtggtatcatttgaatacaatga-atg---gttatgaaagaatgagc----caagagcataattgagagaa------------------------------------cacattttcagggagcagaaatagcaaatgtggccatggggtatgaatgta-ccgtgatgttcc-----gctaagagtgccagtatgatagagcagaggagatgagatcagaccc i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26309553 415 - 93316391 -tattgagc-atatactatg----ttctagacacatttt----------------aaaagcagtgaataaaacattcaagatgctttggcttcatagagctcttgtcctactattgtgagaaagacaataaataatatcacaaa---------g-ctgtatgcctgatgatgttaggtcctactgc--agaaaa-cagaggagagaaagggaatacagagtcctgggcactggga-ctgctggatactgaacaagatggttgcaaagggccccactgaatgttaccatatgaatacaatga-atg---gttatgagacagttagg----taatagcagaaagcaggaaa------------------------------------gacattttcagagaccaaaggcatcaaatgagtccttggggtaagaaagtacctgtgatgttcc-----aataaggatgccaatgtgatagggcagaggcgatgaggtcagagac i micMur3.chr14 C 0 I 132 s otoGar3.GL873702 931900 442 - 3201129 -----gacctacgtgctaca----ttctaggctcctctctagaactag--tgtaaaaaagtagcaaagaaaacattctaaatctctcagcatcacacagctcttgtctgagcactatgagaaaaacaataaattatatcacaaaggataatgtg-ctttatgcctgatggtattagattttacttc--aaaaaattggaggaaggaaagagagtgcaaagttctggacaccagag-gtgttagattctgagtgagatggtttctggaaaccttactgtgtgttgctatttcaatataacaa-atgcttattataagagagtaaggaagccaagagtatcactgagggaa------------------------------------aatattttcagggagcagaagcactaaatgaggacttggggcaagaacatacctaggatgtttc-----agtacaaatgccaatgtgatagggcagagg-gatgaggttagagac i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44026016 439 - 53741614 ttattcaac-atctactatg----tgctaggtacatgtatagggaaag--gat--aaaagcaatgaataaaacattcaagttgtacttgtttcatggagtttatactctagtatcatgagaaagaaaataaattgcatctcaaagtataatgtgtttttttgtcaaataatcctaaatactaccac--aaatag-taaggcaggaatgggggttggggcattctggtaagagaag-gt----------------------------------cactgagcagaaccatttgagtacaatga-atg---attatgagacagtgagc----caggagcataaatgagagaagTGGttttttttttgtttttttttttttctttttttctttttttcacagagtggaagaagcaaataagtccttggagtcaaaatatacctgcattgttcctgaaaggaaaggatgtcacagtgatagagcagagatgatgaggtc------ i canFam3.chr19 I 221 C 0 s dasNov3.JH569232 1723963 416 + 5974691 -Cattcagc-atctactatttgt----------caggtatatgaaatactagga-gaaaacagtaaaga-gatattcagaaactcttg--tccacaaggcatatagttctatattgtgaggaattcaataaatagtaaaacaaatgataatata-ttgtctaccagatggtgttaagttctatagc-aaagaaa-tggaacaggggagggcaatagggaattttgtggggaattgagtgagtgattctaaagatga------ctgaaggtttcagtgggagata-aagttgaaaacaatgacatg---gttatgagggactaaaa----taggagaataactgagggaa------------------------------------ga-attttcaggaaggcaaaacagcgaatgtgctcatag-gtatatatgtaactggtatatttc-----agtaaggattccattgtgagggagtagatgaagttaga-------- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=648798.000000 s hg38.chr9_KI270719v1_random 32258 68 + 176845 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaac-ttt-gttt-----at---ttaattggcagcca- s panTro5.chr4 135057021 69 + 194502333 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaac-ttttgttt-----at---ttaattggcagcca- i panTro5.chr4 C 0 I 1 s gorGor5.CYUI01001450v1 37576 69 - 70559 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaac-ttttgttt-----at---ttaattggcagcca- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451135 66 - 115148730 catggggagat----gg-------tcacataaagcttcttagaaaatg---agaac-ttttgttt-----at---ttaattggcagcca- i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 131393252 69 + 190429646 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaac-ttttgttt-----at---ttaattggcagcca- i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130912258 69 + 189454096 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaac-ttttgttt-----at---ttaattggcagcca- i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34903583 69 - 40319822 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaac-ttttgttt-----at---ttaattggcagcca- i macNem1.NW_012010911v1 C 0 I 1 s cerAty1.NW_012000798v1 4457714 69 - 9219162 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaac-tgttgttt-----at---ttaattggcagcca- i cerAty1.NW_012000798v1 C 0 I 1 s chlSab2.chr7 78982584 69 + 135778131 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaac-ttttgttt-----at---ttaattggcagcca- i chlSab2.chr7 C 0 I 11 s manLeu1.NW_012103277v1 2749238 69 - 3013352 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaac-tgttgttt-----at---ttaattggcagcca- i manLeu1.NW_012103277v1 C 0 I 1 s colAng1.NW_012114544v1 5980490 69 + 8656713 catggggagac----gg-------tcacataaagcttcttagaaaatggtaagaac-ttttgttt-----at---tcaattggcagcca- i colAng1.NW_012114544v1 C 0 I 1 s calJac3.chr3 129408731 69 - 190850796 cgtggggagat----gg-------tcacataaagcttcttagaaaatgataagaat-tttttttt-----at---ttaattggcaggca- i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6494182 70 - 25294431 cgtagggagat----gg-------tcacataaagcttcttagaaaatggtaagaatgtttttttt-----at---ttaattgggaggca- i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4048767 65 - 6311556 catggggagat----gg-------tcacataaagcttcttagaaaatggtaagaat-ttttt---------t---ttaattgggaggca- i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14904648 69 + 15034901 tgtggggagat----gg-------tcacataaagcttcttagaaaatggtaagaat-tttttttt-----at---ttaattggcaggca- i aotNan1.NW_018507635v1 C 0 I 1 s otoGar3.GL873702 932342 71 - 3201129 --ttagtatgc----gggc----ttcacaaagaactccttaggaaatgataagatt-tatgtttt----aat---ttgactgacagtcc- i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44026455 81 - 53741614 taagatgaagt----aggtcaagcacacatagggatgcctagaacatggcaaagat-tttttttttttttac---tttattggaagcca- i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1724379 74 + 5974691 ---gagggaataaaggg-------tcacatagggtttagtaggaaatggtcatgat-tttggctt-----ttccactgatgggaaaccaa i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26309968 132 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=138994.000000 s hg38.chr9_KI270719v1_random 32326 16 + 176845 tgaagggtttt-aaaca s panTro5.chr4 135057091 16 + 194502333 tgaagggtttt-aaatg i panTro5.chr4 I 1 C 0 s gorGor5.CYUI01001450v1 37645 16 - 70559 tgaagggtttt-aaaca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451202 16 - 115148730 tgaagggtttt-aaaca i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 131393322 16 + 190429646 tgaagggtttt-aaaca i rheMac8.chr5 I 1 C 0 s macFas5.chr5 130912328 16 + 189454096 tgaagggtttt-aaaca i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34903653 16 - 40319822 tgaagggtttt-aaaca i macNem1.NW_012010911v1 I 1 C 0 s cerAty1.NW_012000798v1 4457784 16 - 9219162 tgaagggtttt-aaaca i cerAty1.NW_012000798v1 I 1 C 0 s manLeu1.NW_012103277v1 2749308 16 - 3013352 tgaagggtttt-aaaca i manLeu1.NW_012103277v1 I 1 C 0 s colAng1.NW_012114544v1 5980560 17 + 8656713 tgaagagttttaaaaca i colAng1.NW_012114544v1 I 1 C 0 s calJac3.chr3 129408801 16 - 190850796 tgaagggtttt-aaaca i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6494253 16 - 25294431 taaagggtttt-aaaca i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4048833 16 - 6311556 tgaagggtttt-aaaca i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14904718 16 + 15034901 tgaagggtttt-aaaca i aotNan1.NW_018507635v1 I 1 C 0 s otoGar3.GL873702 932414 16 - 3201129 aaatgggttgt-gaaca i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44026537 11 - 53741614 tgaaga------aaacg i canFam3.chr19 I 1 I 4 s dasNov3.JH569232 1724453 16 + 5974691 agaagggaggt-gaaaa i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26309968 132 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e chlSab2.chr7 78982653 11 + 135778131 I a score=408529.000000 s hg38.chr9_KI270719v1_random 32342 40 + 176845 gaaaagcaatcgcctctttaaagaattagcagtaaca-gtt- s panTro5.chr4 135057107 40 + 194502333 gaaaagcaattgcctctttaaagaattagcagtaaca-gtt- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 37661 40 - 70559 gaaaagcaatcgcctctttaaagaattagcagtaaca-gtt- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451218 40 - 115148730 gaaaagcaatagcctctttaaagaattagcagtaaca-gtt- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393338 40 + 190429646 gaaaaacaatcgcctcttcaaagaattagcaataaca-gtt- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912344 40 + 189454096 gaaaaacaatcgcctcttcaaagaattagcaataaca-gtt- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903669 40 - 40319822 gaaaaacaatcgcctcttcaaagaattagcaataaca-gtt- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457800 40 - 9219162 gaaaagcaatcgcctcttcaaagaattagcaaaaaca-gtt- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982664 40 + 135778131 gaaaagcaatcacctcttcaaagaattagcaataaca-gtt- i chlSab2.chr7 I 11 C 0 s manLeu1.NW_012103277v1 2749324 40 - 3013352 gaaaagcaatcgcctcttcaaagaattagcaataaca-gtt- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980577 40 + 8656713 gaaaagcaatcgcctcttcaaagaattagcaataaca-att- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408817 41 - 190850796 gaagagctatagcctctttaaagatttagcagtaacacttt- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494269 41 - 25294431 gaaaagcaatagcctctttaaagatttagcagtaacacttt- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4048849 41 - 6311556 gaaaagcaatagcctctttaaagatttagcagtaacacttt- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14904734 41 + 15034901 gaaaagcaatagcctctttaaagatttagcagtaacacttt- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 932430 40 - 3201129 gaaaagtagtaaactcttcaaacatttagcagcatca-ctt- i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44026552 40 - 53741614 gaaaagtaataacctctttaaagatttagcaatacca-tgt- i canFam3.chr19 I 4 I 1 s dasNov3.JH569232 1724469 41 + 5974691 gaaaagtaatagcatcttaaaagatttggcagtatca-cctc i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26309968 132 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=915031.000000 s hg38.chr9_KI270719v1_random 32382 85 + 176845 tgactgatctg-tgaaaatagaccacagcatagcaaaagagaaaacagggaaattagtgaggaaagtatcatgtaaactattgc------------------------------------------------------------------------tg s panTro5.chr4 135057147 85 + 194502333 tgactgatttg-tgaaaatagaccatagcatagcaaaagagaaaacagggaaattagtgaggaaagtattgtgtaaactattcg------------------------------------------------------------------------ga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 37701 85 - 70559 tgactgatctg-tgaaaatagaccatagcatagcaaaagagaaaacagggaaattagtgaggaaactatcgtgtaaactattcc------------------------------------------------------------------------tg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451258 85 - 115148730 ggactgatttg-ggaaaatagaccacagcatagcaaaagagaaaacagggaaatcagtgaggagactattgtgtagactattcg------------------------------------------------------------------------cg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393378 84 + 190429646 tgactgatttg-agaaaatagactatagcatagcaaaagagaaaacaggaaaattagtgaggaaactat-gtgtaaactattcc------------------------------------------------------------------------tg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912384 84 + 189454096 tgactgatttg-agaaaatagactatagcatagcaaaagagaaaacaggaaaattagtgaggaaactat-GTGTAAACTATTCC------------------------------------------------------------------------TG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903709 84 - 40319822 tgactgatttg-agaaaatagactatagcatagcaaaagagaaaacaggaaaattagtgaggaaactat-gtgtaaactattcc------------------------------------------------------------------------tg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457840 84 - 9219162 tgactgatttg-agaaaatagactatagcatagcaaaagagaaaacagggaaattagtgaggaaactat-gtgtaaactattcc------------------------------------------------------------------------tg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982704 84 + 135778131 tgactgatttg-agaaaatatactacagcatagcaaaagagaaaacagggaaattagtgaggaaactat-GTGTAAACTATTCC------------------------------------------------------------------------TG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749364 84 - 3013352 tgactgatttg-agaaaatagactatagcatagcaaaagagaaaacagggaaattagtgaggaaactat-gtgtaaactattcc------------------------------------------------------------------------tg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980617 84 + 8656713 tgactgatttg-agaaaacagactatagcatagcaaaagagaaaacagggaaattagtgaggaaactat-gtgtaaactattcg------------------------------------------------------------------------tg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408858 85 - 190850796 tgactgatttg-tgaaaatagcctatagcatagcaaaagagaaaacaggctgattagtgagaaaactattataTAAACTATTCC------------------------------------------------------------------------TG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494310 85 - 25294431 tgactgatttg-tgaaaatagactatagcatagcaaaagagaaaacagagagattagtgagaaaactatGATACAAACTATTCC------------------------------------------------------------------------TG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4048890 85 - 6311556 tgactgatttg-tgaaaatagactatagcatagcaaaagagcaaacagggagattagtgagaaaactatGATGTAAACTATTCC------------------------------------------------------------------------TG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14904775 85 + 15034901 tgactgatttg-tgaaaatagactatagtatagcaaaagagaaaacagggagattagtgagaaaactatggtaTAAACTATTCC------------------------------------------------------------------------TG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26310100 79 - 93316391 tgactgatttg-tgaaaatagaccacagcatagcaaaaa------cagggagattaatgaggaaactattatttaaactattcc------------------------------------------------------------------------tg i micMur3.chr14 I 132 C 0 s otoGar3.GL873702 932471 81 - 3201129 ggaccgatttg-tgaaaatagacgacagcctagcaaaaaag----aaaggagattaatgaggaaactattgtgtaaACGATTCC------------------------------------------------------------------------TG i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44026593 157 - 53741614 tgactcctatg-taaaaatagactacagatcagcaaaagagaaaatagggagatcagtgagggaagtagtatgtaaactcttcctaatatgtgctcattgacttggatcaggtgttaaatgtagggaggagaagagaccagattcagattatatcttg i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1724510 59 + 5974691 tgactgctacgttgaaaataggttataa---------------------------agtgagaaaactattgtgcaaattattcc------------------------------------------------------------------------tg i dasNov3.JH569232 C 0 I 1431 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=251868.000000 s hg38.chr9_KI270719v1_random 32467 26 + 176845 aagctgttc---------------------------taaactataaactatgt s panTro5.chr4 135057232 26 + 194502333 aagctgttc---------------------------taaactataaactatgt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 37786 26 - 70559 aagctgttc---------------------------taaactataaactatgt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451343 26 - 115148730 aagctgttc---------------------------taaactataaactatgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393462 26 + 190429646 aagctgttc---------------------------taaagtataaactatat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912468 26 + 189454096 AAGCTGttc---------------------------taaagtataaactatat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903793 26 - 40319822 aatctgttc---------------------------taaagtataaactatat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457924 26 - 9219162 aagctgttc---------------------------taaagtataaactatat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982788 26 + 135778131 AAGCTGttc---------------------------taaactataaactatat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749448 26 - 3013352 aagctgttc---------------------------taaagtataaactatat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980701 26 + 8656713 aagctgttc---------------------------taaactataaactatat i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408943 26 - 190850796 AAGCTGTTC---------------------------TAAACTATAAACTATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494395 21 - 25294431 AAGCTGTTC---------------------------TAAACTG-----TATAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4048975 26 - 6311556 AAGCTGttc---------------------------taaactataaattatat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14904860 26 + 15034901 AAGCTGttc---------------------------taaactataaactatat i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26310179 26 - 93316391 cagctgttc---------------------------taatctataaactatat i micMur3.chr14 C 0 I 249 s otoGar3.GL873702 932552 26 - 3201129 GAACTGTCT---------------------------TAAATCATAAAGGATGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44026750 53 - 53741614 aaggcaTTCTTGAAGGCCTTTCCAGTGGATTCTTTGTGCATTATAAATAAGGT i canFam3.chr19 C 0 I 55 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1724569 1431 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=913362.000000 s hg38.chr9_KI270719v1_random 32493 148 + 176845 aaattataaattgaaa-ttgttctatgcaaacaagatatatttg---------------------aa-ccctgtatattagaggcaaaagtccatgatattggcaatgttttggcctgaactatgggaggaacagagttggaattactcacctgggtttaaatttgggagg s panTro5.chr4 135057258 148 + 194502333 aaattataaattgaaa-ttgttctatgcaaacaagatatatttg---------------------aa-ccctgtatattagaggcaaaagtccatgatattggcaatgttttggcctgaactatgggaagaacagagttggaattactcacctgggtttaaatttgggagg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 37812 148 - 70559 aaattataaattgaaa-ttgttctatgcaaacaagatatatttg---------------------aa-ccctgtatattagaggcaaaagtccatgatattggcaatgttttggcctgaactatgggaggaacagagttggaattactcacctgggtttaaatttgggagg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451369 148 - 115148730 aaagtataaattgaaa-ttgttctatgaaaacaagatatagttg---------------------aa-ccctgtatattagaggcagaagtccatgatattggcaatgttttggcctgaactattggaggaagagagttggaattactcacctgggtttaaatttgggagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393488 148 + 190429646 aaattattaattgaaa-tttttctatacaaacaagatatatttg---------------------aa-ccctatatattagtggcaaaagtccatgatactgccaatattttggcctgaactattggggaaacagagttgtaattactcacttgggtttaaatttgggagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912494 148 + 189454096 aaattattaattgaaa-ttTTTCTATACAAACAAGATATATTTG---------------------AA-CCCTATATATTAGTGGCaaaagtccatgatactgccaatattttggcctgaactattggggaaacagagttgtaattactcacttgggtttaaatttgggagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903819 148 - 40319822 aaattattaattgaaa-tttttctatacaaacaagatatatttg---------------------aa-ccctatatattagtggcaaaagtccatgatactgccaatattttggcctgaactattggggaaacagagttgtaattactcacttgggtttaaatttgagagg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4457950 148 - 9219162 aaattattaattgaaa-tttttctatacaaacaagatatatttg---------------------aa-ccctatatattagtggcaaaagtccatgatactgccaatattttggcctgaactattggggaaacagagttgtaattactcacttgggtttaaatttgggagg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982814 148 + 135778131 aaattattaattgaaa-ttTTTCTATGCAAACAAGATATATTTG---------------------AA-CCCTATATATTAGTGGCaaaagtccatgatactgccaatattttggcctgaactcttggggaaacagagttgtaattactcacttgggtttaaatttgggagg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749474 148 - 3013352 aaattattaattgaaa-tttttctatacaaacaagatatatttg---------------------aa-ccctatatattagtggcaaaagtccatgatactgccaatattttggcctgaactattggggaaacagagttgtaattactcacttgggtttaaatttgggagg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980727 146 + 8656713 aaatgattaattgaaa-tttttccatgcaaacaagatatatttg---------------------aa-ccctgtatattagtggcaaaagtccatgatactgccaatattttggcctgaactattggggaaac--agttgtagttactcacttgggtttaaatttgggagg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129408969 73 - 190850796 AAATTATACATCAAAA-ATGTTCTATGAAAACAAGATATATTTG---------------------AACCCCCATATATAAGAGGCAAAAGTT----------------------------------------------------------------------------AGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494416 72 - 25294431 AAATTATACATCAAAA-CTGTTCTATGAAAACAAGATATATTCG---------------------AA-CCCTGTATATTAGAGGCAAAAGTT----------------------------------------------------------------------------AGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049001 73 - 6311556 aaattatacatcaaaattTGTTCTATGAAAACAAGATATATTTG---------------------AA-CCCTGTATATTAGAGGCAAAAGTT----------------------------------------------------------------------------AGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14904886 72 + 15034901 aaattatacatcaaaa-ttGTTCTATGGAAACAAGATATATTTG---------------------AA-CTCCATATATTAGAGGCCAAAGTT----------------------------------------------------------------------------AGA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 932578 138 - 3201129 -----ACTAGATGGAT-CTAGTCTATGCAAACCAGATATATCTT---------------------AA-CTCTATTTATTAGAGACAAAGGTACTTGATATTGCCAATGTTTTGGCCTAAACAAATGGAGTAAAAGAGTTGTAATTACCAATAAGGGT----ATTTGGGAG- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44026858 164 - 53741614 AAATCACACACTGGAG-TTTTTCTGTGGAAATTAGATATATTTAACTCTATATTAGATACATTTTAA-CTCTATATATTAGAGAACAAAGTCAATAATTCTACCAAT-CTTTAATCTAAACAATTGGAGGA----AATTGGAATTACTAACATAGTTATGAAGTTGAGAAG i canFam3.chr19 I 55 C 0 e micMur3.chr14 26310205 249 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1724569 1431 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=68068.000000 s hg38.chr9_KI270719v1_random 32641 5 + 176845 agcaa s panTro5.chr4 135057406 5 + 194502333 agcaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 37960 5 - 70559 agcaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451517 5 - 115148730 agcaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393636 5 + 190429646 agcaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912642 5 + 189454096 agcaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903967 5 - 40319822 agcaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458098 5 - 9219162 agcaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982962 5 + 135778131 agcaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749622 5 - 3013352 agcaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980873 5 + 8656713 agcaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129409042 5 - 190850796 AGCAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494488 5 - 25294431 AGCAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049074 5 - 6311556 AGCAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14904958 5 + 15034901 AGCAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 932716 5 - 3201129 AGCAA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44027022 5 - 53741614 AGTAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726000 5 + 5974691 agcag i dasNov3.JH569232 I 1431 C 0 e micMur3.chr14 26310205 249 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=635556.000000 s hg38.chr9_KI270719v1_random 32646 66 + 176845 atttgggaatagaggatagga--aagatcaatagttttatttttaacaggcttaattttaaatAGACA s panTro5.chr4 135057411 66 + 194502333 atttgggattagaggatagga--aagatcaatagttttatttttaacaggcttaattttaaatAGACA i panTro5.chr4 C 0 I 4 s gorGor5.CYUI01001450v1 37965 66 - 70559 atttgggattagaggatagga--aagatcaatagttttatttttaacaggcttaattttaaatAGACA i gorGor5.CYUI01001450v1 C 0 I 4 s nomLeu3.chr7b 90451522 66 - 115148730 atttgggattagaggatagga--aagatcaatagttttatttttaacagacttaattttaaatAGACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393641 66 + 190429646 atttgggattaagggatagga--aagatcaatagttttattttcaacaggcttaattttaaatAGACa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912647 66 + 189454096 atttgggattaagggatagga--aagatcaatagttttattttcaacaggcttaattttaaatAGACa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34903972 66 - 40319822 atttgggattaagggatagga--aagatcaatagttttattttcaacaggcttaattttaaatAGACA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458103 66 - 9219162 atttgggattaagggatagga--aagatcaatagttttattttcaacaggcttaattttaaatAGACA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78982967 66 + 135778131 atttggcattaggggatagga--aagatcaatagttttattttcaacaggcttaattttaaatAGACa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749627 66 - 3013352 atttgggattaagggatagga--aagatcaatagttttattttcaacaggcttaattttaaatAGACA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980878 66 + 8656713 atttgggattaggggatagga--aagatcaatagttttatttttaacaggcttaattttaaatAGACA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129409047 66 - 190850796 ATTTGGGATTAGAGGATAGAA--AAGATCAATTGTTTTATTTTTAAGAAGCttaattttaaatagata i calJac3.chr3 C 0 I 4 s saiBol1.JH378129 6494493 66 - 25294431 ATTTAGGATTAAAGGATAGAA--AAATTCAATAGCTTTATTTTTAACAGGCTTAATTTTCAATAGata i saiBol1.JH378129 C 0 I 4 s cebCap1.NW_016107420v1 4049079 66 - 6311556 ATTTGGGATTAGAGGATAGAA--AATATCAATAGTTTTATTTTTAACAGGCTTAATTTTAAATAGATA i cebCap1.NW_016107420v1 C 0 I 4 s aotNan1.NW_018507635v1 14904963 66 + 15034901 ATTTGTGATTAGAGGATAGAA--AAGATCAATAGTTTTATTTTTAACAGGCTTAATTTTAAATAGATA i aotNan1.NW_018507635v1 C 0 I 4 s canFam3.chr19 44027027 65 - 53741614 ATTATGGCATAGAGAGTAGGA--AAGA-CAATAGTTTTATTTGTTATATGTTTAGCATGAAATAGACC i canFam3.chr19 C 0 I 185 s dasNov3.JH569232 1726005 67 + 5974691 ctaggaaactaaaacaTATGAATATGAGCAATAGTTTGCTTTTTAAGATGTAAAATTTGAAAT-GATA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26310205 249 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 932721 0 - 3201129 C a score=207057.000000 s hg38.chr9_KI270719v1_random 32712 27 + 176845 ATCATATA-------------------------------------------------------ATA-------TATTTTAAATAAACTA s panTro5.chr4 135057481 27 + 194502333 ATCATATA-------------------------------------------------------ATA-------TATTTTAAATAAACTA i panTro5.chr4 I 4 C 0 s gorGor5.CYUI01001450v1 38035 27 - 70559 ATCATATA-------------------------------------------------------ATA-------TATTTTAAATAAATTA i gorGor5.CYUI01001450v1 I 4 C 0 s nomLeu3.chr7b 90451588 27 - 115148730 ATCATGTA-------------------------------------------------------ATA-------TATTTTAAATAAATTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393707 27 + 190429646 atcataaa-------------------------------------------------------ata-------tattttaaataaatta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912713 27 + 189454096 atcataaa-------------------------------------------------------ata-------tattttaaataaatta i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904038 27 - 40319822 ATCATAAA-------------------------------------------------------ATA-------TATTTTAAATAAATTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458169 27 - 9219162 ATCATAAA-------------------------------------------------------ATA-------TATTTTAAATAAATTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983033 27 + 135778131 atcataaa-------------------------------------------------------ata-------tattttaaataaatta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749693 27 - 3013352 ATCATAAA-------------------------------------------------------ATA-------TATTTTAAATAAATTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980944 27 + 8656713 GTCATAAA-------------------------------------------------------ACA-------TATTTTAAATAAATTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129409117 27 - 190850796 atcatata-------------------------------------------------------ata-------tattttaaataaatta i calJac3.chr3 I 4 C 0 s saiBol1.JH378129 6494563 27 - 25294431 attatata-------------------------------------------------------ata-------tattttaaataaatta i saiBol1.JH378129 I 4 C 0 s cebCap1.NW_016107420v1 4049149 22 - 6311556 ATC------------------------------------------------------------AAA-------TATTTCAAATAAATTA i cebCap1.NW_016107420v1 I 4 C 0 s aotNan1.NW_018507635v1 14905033 22 + 15034901 ATC------------------------------------------------------------ATA-------TATTTTAAATAAATTA i aotNan1.NW_018507635v1 I 4 C 0 s canFam3.chr19 44027277 82 - 53741614 atcataaataaataaaaaaataaaaaaataaaGTATGTTAAGTACTTTAAGTACGTTAAGTAGATA-------TATTTTAAGTACGTTA i canFam3.chr19 I 185 C 0 s dasNov3.JH569232 1726072 30 + 5974691 ----TTTA-------------------------------------------------------ATAGCATGAGTCttttatataaatta i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26310205 249 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 932721 0 - 3201129 C a score=199740.000000 s hg38.chr9_KI270719v1_random 32739 20 + 176845 TTAATCAT-AAAATAATGTCA s panTro5.chr4 135057508 20 + 194502333 TTAATCAT-AAAATAATGTCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38062 20 - 70559 TTAATCAT-AAAATAATGTCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451615 20 - 115148730 TTAATCAT-AAAATAATGTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393734 20 + 190429646 ttaatcat-aaaataATGTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912740 20 + 189454096 ttaatcat-aaaataATGTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904065 20 - 40319822 TTAATCAT-AAAATAATGTCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458196 20 - 9219162 TTAATCAT-AAAATAATGTCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983060 20 + 135778131 ttaatcat-aaaataATGTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749720 20 - 3013352 TTAATCAT-AAAATAATGTCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980971 20 + 8656713 TTAATCAT-AAAATAATGTCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129409144 20 - 190850796 taaattat-aaaGAAATGTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494590 20 - 25294431 ttaattat-aaaataatGTCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049171 20 - 6311556 TTAATTAT-AAAATAATGTCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905055 20 + 15034901 TTAATTAT-AAAATAATGTCA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26310454 20 - 93316391 TTAAATAT-ATAAAAATGTCA i micMur3.chr14 I 249 C 0 s canFam3.chr19 44027359 21 - 53741614 TTCCTCATAAAAATAATTGTA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726102 17 + 5974691 tta--taa-aaaaGAATGCT- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 932721 0 - 3201129 C a score=140329.000000 s hg38.chr9_KI270719v1_random 32759 11 + 176845 GGCTATATTTT s panTro5.chr4 135057528 11 + 194502333 GGCTATATTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38082 11 - 70559 GGCTATATTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451635 11 - 115148730 GGCTATATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393754 11 + 190429646 GGGTATATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912760 11 + 189454096 GGGTATATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904085 11 - 40319822 GGGTATATTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458216 11 - 9219162 GGGTATATTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983080 11 + 135778131 GGGTATATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749740 11 - 3013352 GGGTATATTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5980991 11 + 8656713 GGGTATGTTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129409164 11 - 190850796 GGCTAAATTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494610 11 - 25294431 GGCTATAATTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049191 11 - 6311556 GGCTATATTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905075 11 + 15034901 GACTATATTTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26310474 11 - 93316391 GGCTATATTTT i micMur3.chr14 C 0 I 39 s otoGar3.GL873702 932721 11 - 3201129 GGCTATATTTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44027380 11 - 53741614 GGCTATATCTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726119 11 + 5974691 GACTATATTTT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=113912.000000 s hg38.chr9_KI270719v1_random 32770 12 + 176845 AATACTCACCTA s panTro5.chr4 135057539 12 + 194502333 AATACTCACCTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38093 12 - 70559 AATACTCACCTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451646 12 - 115148730 AATACTCACCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393765 12 + 190429646 AATACTCACCTA i rheMac8.chr5 C 0 I 13 s macFas5.chr5 130912771 12 + 189454096 AATACTCACCTA i macFas5.chr5 C 0 I 5 s macNem1.NW_012010911v1 34904096 12 - 40319822 AATACTCACCTA i macNem1.NW_012010911v1 C 0 I 5 s cerAty1.NW_012000798v1 4458227 12 - 9219162 AATACTCACCTA i cerAty1.NW_012000798v1 C 0 I 5 s chlSab2.chr7 78983091 12 + 135778131 AATACTCACCTA i chlSab2.chr7 C 0 I 5 s manLeu1.NW_012103277v1 2749751 12 - 3013352 AATACTCACCTA i manLeu1.NW_012103277v1 C 0 I 5 s colAng1.NW_012114544v1 5981002 12 + 8656713 AATACTCACCTA i colAng1.NW_012114544v1 C 0 I 5 s calJac3.chr3 129409175 12 - 190850796 AATACTCACCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494621 12 - 25294431 AATACTCACCTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049202 12 - 6311556 AATACTCACCTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905086 12 + 15034901 AATATTCACCTA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 932732 11 - 3201129 TACATTCACCT- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44027391 9 - 53741614 TGTCTTCAC--- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726130 12 + 5974691 TATTTTTATCTC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26310485 39 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=-33581.000000 s hg38.chr9_KI270719v1_random 32782 12 + 176845 TCA-ATTataa----at s panTro5.chr4 135057551 13 + 194502333 AGATATCAATG----AT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38105 12 - 70559 TCA-ATTataa----at i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451658 13 - 115148730 AGGTATCAATG----AT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130912788 8 + 189454096 -----TCAATG----AC i macFas5.chr5 I 5 C 0 s macNem1.NW_012010911v1 34904113 8 - 40319822 -----TCAATG----AT i macNem1.NW_012010911v1 I 5 C 0 s cerAty1.NW_012000798v1 4458244 8 - 9219162 -----TCAATG----AT i cerAty1.NW_012000798v1 I 5 C 0 s chlSab2.chr7 78983108 12 + 135778131 -----TCAATGATAAAT i chlSab2.chr7 I 5 C 0 s manLeu1.NW_012103277v1 2749768 8 - 3013352 -----TCAATG----AT i manLeu1.NW_012103277v1 I 5 C 0 s colAng1.NW_012114544v1 5981019 8 + 8656713 -----TCAATG----AT i colAng1.NW_012114544v1 I 5 I 4 s calJac3.chr3 129409187 6 - 190850796 -------AGAT----AT i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6494633 6 - 25294431 -------AGAT----AT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049214 6 - 6311556 -------AAAT----AT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905098 6 + 15034901 -------AGAT----AT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 932743 7 - 3201129 ------CAGAT----AT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44027400 8 - 53741614 ----GTCAGAA----A- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726142 3 + 5974691 ---------TG----A- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26310485 39 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e rheMac8.chr5 131393777 13 + 190429646 I a score=153951.000000 s hg38.chr9_KI270719v1_random 32794 17 + 176845 aaataaaatgataagaa s panTro5.chr4 135057564 17 + 194502333 AAATAAAATGATAAGAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38117 16 - 70559 aaataaaatg-taagaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451671 17 - 115148730 AAATAAAATGATAAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393790 17 + 190429646 AAATAAAGTGATAAGAA i rheMac8.chr5 I 13 C 0 s macFas5.chr5 130912796 17 + 189454096 AAATAAAATGATAAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904121 17 - 40319822 AAATAAAATGATAAGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458252 17 - 9219162 AAATAAAATGATAAGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983120 17 + 135778131 AAATAAAATGATAAGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749776 17 - 3013352 AAATAAAATGATAAGAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5981031 17 + 8656713 AAATAAAACGATAAGAA i colAng1.NW_012114544v1 I 4 C 0 s calJac3.chr3 129409195 17 - 190850796 TAATCAAATGATAAGAA i calJac3.chr3 I 2 C 0 s saiBol1.JH378129 6494639 17 - 25294431 TAATCAAACGATAAGAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049220 17 - 6311556 TAATCAAATGATAAGAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905104 17 + 15034901 TAATCAAATGATAAGAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 932750 14 - 3201129 AAATAAAATGATAA--- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44027408 13 - 53741614 ----AAAATTATATGAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726145 8 + 5974691 ---------TATAAGAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26310485 39 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=82234.000000 s hg38.chr9_KI270719v1_random 32811 6 + 176845 aataca s panTro5.chr4 135057581 6 + 194502333 AATACA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38133 6 - 70559 aataca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451688 6 - 115148730 AATACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393807 6 + 190429646 AATACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912813 6 + 189454096 AATACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904138 6 - 40319822 AATACA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458269 6 - 9219162 AATACA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983137 6 + 135778131 AATACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2749793 6 - 3013352 AATACA i manLeu1.NW_012103277v1 C 0 M 1485 s colAng1.NW_012114544v1 5981048 6 + 8656713 AATACA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129409212 6 - 190850796 AATACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494656 6 - 25294431 AATACT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049237 6 - 6311556 AATACA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905121 6 + 15034901 AATACA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26310524 6 - 93316391 AATACA i micMur3.chr14 I 39 C 0 s otoGar3.GL873702 932764 4 - 3201129 --TATA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44027421 6 - 53741614 AATACA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726153 6 + 5974691 AATATA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=5711621.000000 s hg38.chr9_KI270719v1_random 32817 552 + 176845 taaaAACCGCAATAGTTTTTGTAATTAGACAGTGGAGTTACTTGTGATTTTAATGATGTAGGA-ATTATTCAG-TTTTT-AAATAATAAATCTTTATTAATTTTATAATTATCAAAGATGCTATAAAAAGAAATAATT------TTTTTATTAC-TATGCTACTG--------ATGTATTTCCATTGCATTGACTAAC--AAAATTAATACTAGAA--TTTTCAAAAGTATCCACAGTGGTTACTTTATTTGCACTGTTAATTCAGCTCTTTTTAAGTATGCCTTCTCGTTCCCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGGTCCAGTTATTCCAATATGAAATTCCTTTTAATTATGGGCTACTTTTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTACTTCACATTGTTTTATGAGTGGGTGAAAAATA-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGTCATCTAATTACATTTCAGAACATTATACCTCCTCAAAGCCTTGTTTCGGCATATATCTC s panTro5.chr4 135057587 553 + 194502333 TCAAGACCGCAATAGTTGTTGTAATTAGACAGTGGAGTTACTTGTGATTTTAATGATGTAGGA-ATTATTCCG-TTTTTTACATAATAAATCTTTATTAATTTTATAATTATCAAAGATGCTATAAAAAGAAATAATT------TTTTTATTAC-TATGCTACTG--------ATGTATTTCCATTGCATTGACTAAC--AAAATTAACACTAGAA--TTTTCAAAAATATCCACAGTGGTTACTTTATTTGCACTGTTAATTCAGCTCTTTTTAAGTATGCCTTCTTGTTCCCTAACTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAGTAAGCAAATTAGTTCCAGTTATTCCAATATGAAATTCCTTTTAATTATGGGCTACTTTTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTACTTCACATTGTTTTATGAGTGGGTGAAAAATG-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGTCATCTAATTACATTTCAGAACATTATACCTCCTCAAAGCCTTGTTTCAGCATATATCTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38139 551 - 70559 taaaAACCGCAATAGTTGTTGTAATTAGACAGTGGAGTTACTTGTGA-TTTAATGATGTAGGA-ATTATTCTG-TTTTTTAAATAATAAATCTTTATTAATTTTATAATTATCAAAGATGCTATAAAAAGAAATAA-T------TTTTTATTAC-TATGCTACTG--------ATGTATTTCCATTGCATTGACTAAC--AAAATTAACACTAGAA--TTTTCAAAAGTATCCACAGTGGTTACTTTATTTGCACTGTTAATTCAGCTCTTTTTAAGTATGCCTTCTCGTTCCCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGGTCCAGTTATTCCAATATGAAATTCCTTTTAATTATGGGCTACTTTTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTACTTCACATTGTTTTATGAGTGGGTGAAAAATA-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGTCATCTAATTACATTTCAGAACATTATACCTCCTCAAAGCCTTGTTTCAGCATATATCTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90451694 555 - 115148730 TCAAGACCGCAATAGTTGTTGTAATTAGACAGTGGAGTTACTTGTGATTTTAATGTTGTAGGA-ATTATTCAG-TTTTT-AAATAATAAATCTTTACTAATTTTATAATTATCAAAGATGCTATAAAAAGAAATAATTATG---TTTTTATTAC-TGTGCTACTG--------ATGTATTTCCATTGCATTGACTAAC--AAAATTAACACTAGAA--TTTTCAAAAACATCCACAGTGGTTACTTTATTTGCACTGTTAATTCAGCTCTTTTTAAGTATGCCTTCTCGTTCCCTAATTGATATAATTCAGAGAATACACTTGGATACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTCCAATATGAAATTCCTTTTAATTATGGACTACTTTTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTACTTCACATTGTTTTATGAGTGGGTGAAAAATA-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGTCATCTAATTACATTTCAGACCATTATACCTCCTCAAAGCCTTGTTTCAGCATATATTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131393813 553 + 190429646 TCAAGACCACAACAGTTGTTGTAGTTAGACAGTGGAGTTACTTGTGATTTTAATGACATAGGA-ATTATTCAG-TTTTTAAAATAATAAATCTTTATTAATTTTAAAATTATCAAAGATGCTATAAAAAGAAATAT--------TTTTTATTAC-TATGCTACTG--------ATGTATTTCCATTGCATTGACTAACAGAAAATTAACACTATAA--TTTTCAAAAATATGCACAGTGGTTAGTTTATTTGCACTGCTAATTCAGCTCTTTTTAAGTATGCCTTCTCATTCCCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTCCAATATGAAATTCCTTTTAATTATGGGCTACTTTTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTACTGCACATTGTTTTATGATTGGGTGAAAAAGA-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGCCATCTAATTACATTTCCGAACATTATACCTCTTCAAAGCCTTGTTTCAGCATATATTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130912819 553 + 189454096 TCAAGACCACAACAGTTGTTGTAATTAGACAGTGGAGTTACTTGTGATTTTAATGACGTAGGA-ATTATTCAG-TTTTTAAAATAATAAATCTTTATTAATTTTAAAATTATCAAAGATGCTATAAAAAGAAATAT--------TTTTTATTAC-TATGCTACTG--------ATGTATTTCCATTGCATTGACTAACAGAAAATTAACACTATAA--TTTTCAAAAATATGCACAGTGGTTAGTTTATTTGCACTGCTAATTCAGCTCTTTTTAAGTATGCCTTCTCATTCCCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTCCAATATGAAATTCCTTTTAATTATGGGCTACTTTTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTACTGCACATTGTTTTATGATTGGGTGAAAAAGA-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGCCATCTAATTACATTTCCGAACATTATACCTCTTCAAAGCCTTGTTTCAGCATATATTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904144 553 - 40319822 TCAAGACCACAACAGTTGTTGTAATTAGACAGTGGAGTTACTTGTTATTTTAATGACGTAGGA-ATTATTCAG-TTTTTAAAATAATAAATCTTTATTAATTTTAAAATTATCAAAGATGCTATAAAAAGAAATAT--------TTTTTATTAC-TATGCTACTG--------ATGTATTTCCATTGCATTGACTAACAGAAAATTAACACTATAA--TTTTCAAAAATATGCACAGTGGTTAGTTTATTTGCACTGCTAATTCAGCTCTTTTTAAGTATGCCTTCTCATTCCCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTCCAATATGAAATCCCTTTTAATTATGGGCTACTTTTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTACTGCACATTGTTTTATGATTGGGTGAAAAAGA-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGCCATCTAATTACATTTCCGAACATTATACCTCTTCAAAGCCTTGTTTCAGCATATATTTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458275 549 - 9219162 TCAAGACCACAACAGTTGTTGTAATT----AGTGGAGTTACTTCTGATTTTAATGACGTAGGA-ATTATTCAG-TTTTTAAAATAATAAATCTTTATTAATTTTAAAATTATCAAAGATGCTATAAAAAGAAATAA--------TTTTTATTAC-TATGCTACTG--------ATGTATTTCCATTGCATTGACTAACAGAAAATTAACACTATAA--TTTTCAAAAATATGCACAGTGGTTAGTTTATTTGCACTGCTAATTCAGCTCTTTTTAAGTATGCCTTCTCATTCCCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTCCAATATGAAATTCCTTTTAATTATGGGCTACTTTTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTACTGCACATTGTTTTATGATTGGGTGAAAAAGA-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGCCATCTAATTACATTTCCGAACATTATACCTCTTCAAAGCCTTGTTTCAGCATATATTTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983143 550 + 135778131 TCAAGACCACAATAGTTGTTGTAATTAGACAGTGGAGTTACTTGTGATTTTAATGACGTAGGA-ATTATTCAG-TTTTTAAAATAATAAATCTTTATTAATTTTACAATTATCAAAGATGCTATAAAAAGAAATAA-----------TTATTAC-TATGCTACTG--------ACATATTTCCATTGCATTGACTAACAGAAAATTAACACTAGAA--TTTTCAAAAATATCCACAGTAGTTAGTTTATTTGCACTGCTAATTCAGCTCTTTTTAAGTATGCCTTCTCCTTCCCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTCCAATATGAAATTCCTTTTAATTATGGGCTACTTTTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTACTGCACATTGTTTTATGAGTGGGTGAAAAATG-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGACATCTAATTACATTTCAGAACATTATACCTCTTCAAAGCCTTGTTTCAGCATATATCTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5981054 553 + 8656713 TCAAGACCACAATAGTTGTTGTAATTAGACTGTGGAGTTACTTGTGATTTTAATGATGTAGGA-ATTATTCAG-TTTTTAAAATAATAAATCTTTATTAATTTTACAATTATCAAAGATACTATAAAAAGAAATAA--------TTTGTATTAC-TATGCTACTG--------ACATATTTCCATTGCATTGACTAACAGAAAATTAACAGTAGAA--TTTTCAAAAATATCCACAGTGGTTAGTTTATTTGCACTGCTAATTCAGCTCTTTTTAAGTATGCCTTCTCGTTCCCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTCCAATATGAAATTCCTTTTAATTATGGGCTACTTATGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATGACCTGCTGCACATTGTTTTATGAGTGGGTGAAAAATG-TAAGTGCTAGG----AAATGTGTACCAGAAATAATTTGCCATCTAATTACATTTCAGAACATTATACATCATCAGAGCCTTGTTTCAGCATATATCTC i colAng1.NW_012114544v1 C 0 I 686 s calJac3.chr3 129409218 520 - 190850796 TCAAGACCACAATCATTGTTGTAATT----GGTGAAGTTACTTGTGATTCTATTGAGGTAGGA-ATTTTTCAGTTTTTTTAAATAATAAAAC--TGTTAATTTTATACTTATCAAAGATGCTATAAAAAGAAATAATTGTAT--TTTTTATTAC-TATGCTACTG--------ATGTATTTCCACTGCATTGACAAACAGAAAATTAACATTAGAA--TTTTCAAAACTATCCACAGTGGTTACTTTATTTGCACTGTTAATTCAGCTCTTTTTAAGTATGCCTTCTCATTCTCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTTCAATATGAAATTCCTTTTAATTATGGGCTACTTCTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATAACCTAC------TTGTTTTATGAGTGGGTGAAAAACA-TAAGTGCTAGG----AAATGGGTACCAGAAATAATTTGTCATCTAATTATATTTCAGAACATTCTAC----------------------------CTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6494662 549 - 25294431 TCAAGACCACAATCATTGTTGTAATT----AGTGAAGTCACTTGTGATTCTATTGATGTAGGA-ATTTTTCAG-TTTTTTAAATAATAAAACTTTGTTAATTTTATACTTATCAAAGATGCCataaaaagaaataattatat--tttttattaC-TATGCTACTG--------ATGTATTTCCACTGCATTGACAAACAGAAAATTAACATCAGAA--TTTTCAAAACTATCCACAGTGGTTACTTTATTTGCACTGTTAATTCAGCTCTTTTTAAGTATGCCTTCTCATTCTCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTTCAATATGAAATTTCTTTTAATTATGGGCTACTTCTGGAGATGCAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATAACCTAC------TTGTTTTATGAGTGGGTGAAAAACA-TAAGTGCTAGG----AAATGGGTACCAGAAATAATTTGTCATCTAATTATATTTCAGAACATTCTACCTCCTCAAAGCATTGTTTCAGCCTATATCTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049243 549 - 6311556 TCAAGACCACAATCATTGTTGTAATT----AGTGAAGTTACTTGTGATTCTATTGATGTAGGA-ATTTTTCAG-TTTTTTAAATAATAAAACTTTGTTAATTTTATACTTATCAAAGATGCTATAAAGAGAAATAATTGTAT--TTTTTATTAC-TATGCTACTG--------ATGTATTTCCACTGCATTGACAAACAGAAAATCAACATCAGAA--TTTTCAAAACTATCCACAGTGGTTACTTTATTTGCACTGTTAATTCAGCTCTTTTTAAGTATGCCTTCTCATTCTCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTTCAATATGAAATTCCTTTTAATTATGGGCTACTTCTGGAGATGTAGAATAATTGGAATGTTTAATTTGGTGACTCAGTATAATCTAC------TTGTTTTATGAGTGGGTGAAAAACA-TAAGTGCTAGG----AAATGGGTACCAGAAATAATTTGTCATCTGATTATATTTCAGAACGTTCTACCTCCTCAAAGCCTTGTTTCAGCCTATATCTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905127 549 + 15034901 TCAAGACCACAATCACTGTTGTAATT----AGTGAAGTTACTTGTGATTCTATTGATGTAGGA-ATTTTTCAG-TTTTTTAAATAATAAAACTTTGTTAATTTTATACTCATCAAAGATGCTATAAAAAGAAATAATTGTAT--TTTTTATTAC-TATGCTACTG--------ATGTATTTCTACTGCATTGACAAACAGAAAATTAACATTAGAA--TTTTCAAAACTATCCACAGTGGTTACTTTATTTGCACTGTTAATTCAGCTCTTTTTAAGTATGCCTTCTCATTCTCTAATTGATATAATTCAGAGACTACACTTGGACACAATTTAATGAATAAGCAAATTAGTTCCAGTTATTTCAATATGAAATTCCTTTTAATTATGGGCTACTTCTGGAGATGTAGAATAATTTGAATGTTTAATTTGGTGACTCAGTATAACCTAC------TTGTTTTATGAGTGGGTGAAAAACA-TAAGTGCTAGG----AAATGGGTACCAGAAATAATTTGTCATCTAATTGTATTTCAGAACATTCTACCTCCTCAAAGCCTTGTTTCAGCCTATATCTC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26310530 540 - 93316391 TCGAAACCACAATAGTTGTTACAGTTAGGCAGTGGGGTTATTTATGATCTTATTTATATAGTATATTTTACAG-CTTTTTA-ATAACAAAACTTCATTAATTTTATAGTCATCAAAGATGCTATAA----AAATATTT------TTTTAACTACTTGCACTACTG--------ATGTA--TTAATTGTATTGACTGACACAAAATCAGCATTAGTA--TTTTTAAAAATATTTGCATTGGTTACTTTATTTGCACTGTTAATTCCTATTTTCTTAAGTATGCCTTCTCATTCCCTAACTGATATAATTCAGAGACCATAGTTGGACACAATTTAATGAATAAGCAAATTAATTTTAGTTATTTCAATATGAAATTTCTTTTTTTTATGGGCTACTGCAAGAGATGCAGGATAATTTGAATGTTTAATTTGGTGACTCA-TATGACCTATTT---------TTATGAGTATGTGAAAAATA-CAAGTGATAGG----ATATGTGTACCAGAGAAAGTTTGCAATCTAATTACATTTAAGAGTATTATACCTCATCACAGCTTTGTTTCAGCATAAATCAC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 932768 556 - 3201129 TTAAGACCGTAATAGTTGTTGCAGGTAGGCAGTGGAGTTATTT-TGATTTTATAATTATGGTACTTTTTTTTG-TTTGTT--ATATTAAAACTTCACTAATTTTATAATCATCAAATATGCCATAAAAAGAAATAACG------TTTGTATTTCTTATGCTATGA--------TTGTACTTCAATTGGATTGACTGACACAAAACCAATATTAGGA--TTTTTAAAAATATTTGCAGTGGTTTCTTTATTTGCACTGTTAATTCATCTCCTCTTAAGTATGCCTTCACATTCCCTAATTGATATAATTCAGAGACTACAGTTGGACACAATTTAATGAATACACAAATTAATTTCAGTTATTTTAATATGAAATTCCTTTTATTCATGGGCTACTGCTGGAGATGTAGTATAATTTGAATGTTTAATTTGGTGACTCA-TATGACCTATTTCATATCATCTTATGAGGACATGAATAATA-CAAATAGTAGGATATATATATATACCACAGAAAATTTGCCATCTAAATACATTTGAGAGCA-TATGTCACGTCAAAGCTTCATTTCAGCATAAATCTC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44027427 548 - 53741614 TCAAGACCACAATAGCTGTTGTAGTTAGGCAGTAGGTTTAGTTGTGATGCTACTGATATAGTGCCTTTTTTAG-CTTTTTA-ATAATAGAA-TCCATTAATTTCATAATCATCAAAGATTCtataaaaataaataattatatCGTTTTTATAAC--ATATTACTGAATTTATTACATACTGTAATTGTATTGACTGACACAAAGATAGTACTAGGATTTTTTTTTTTATATCTGCAATG-----TGCACTTGCACTGTTAATTCAGCTCCTTTTCAGTATGCCTTCTTATTGTCTAATTGATATAATTCAGAGACAACACTTGGACACATTTCAACGAATTAGCTAATGAGTTTCA-CTATTCCAATCTGAAATCCCTTTTATTTATGGGCTATTTCTGGAGATGCAGGTTAATTTAAATGTTTAATTTGGTGACTCAGTACAACCAATTTTATATTGTCTTATGAATGTGTGGAAGATA-TAAGTGCTAGA----TTATGTGTATCAGAGAAAATTTATCATCTAATTACAT---------------CACTTCAAAGTCTTGTCTCAGCATAAAACTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726159 547 + 5974691 TCATGATCACAATAGTGATTGTACATAGACAGTAGTTTTATTAAT----------ACATAGTACATTTTTCAG-AGTTTCA-GTGATGAAACTTCATGAGTTTTATAATCAGTAAATATGCtataa-aataaatatgcatattatttttattatttatattacat--------atatatttCCACTGGATTGACTATATCAAAAATGATATAAGAA--CTAAAAAAAATTTTTACAACTTGTACTTTACTTGCTCTGTTAATTCAGTTCCTTTTAAATATTGCTTCTCATCCCCTAATTGCTATAATTCAGA-ACTACATTTGAACACA-TTTAATGACTAAGCAAATGAGTTCCAACTATTCCGA-ATGAAACTCTTTTTGTTTATGGGCTATTTCTGGAATTGTAGGATAATTTGCATGTTTAATTTGGTCACTCAGTATGTCCTATTTCATTCAGTCTTATAAACGTGTAAAAAATATTAAGTGCTAGA----ATATGTGTACCAAGGAAAGCTTGTTGTCTAATTA-ATTTAGGAATATTATACCACTTTAAAGTCTTGTTTTAGCATAAACTC- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=12376.000000 s hg38.chr9_KI270719v1_random 33369 1 + 176845 A s panTro5.chr4 135058140 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38690 1 - 70559 A i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452249 1 - 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131394366 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130913372 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904697 1 - 40319822 A i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458824 1 - 9219162 A i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983693 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s calJac3.chr3 129409738 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495211 1 - 25294431 A i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049792 1 - 6311556 A i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905676 1 + 15034901 A i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26311070 1 - 93316391 A i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 933324 1 - 3201129 A i otoGar3.GL873702 C 0 I 165 s canFam3.chr19 44027975 1 - 53741614 A i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726706 1 + 5974691 A i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e colAng1.NW_012114544v1 5981607 686 + 8656713 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=192023.000000 s hg38.chr9_KI270719v1_random 33370 24 + 176845 TTTTAAAAATCTATGTTGCATATA s panTro5.chr4 135058141 24 + 194502333 TTTTAAAAATCTATGTTGTATATA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38691 24 - 70559 TTTTAAAAATCTATGTTGTATATA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452250 24 - 115148730 TTTTAAAAATCTATGTTGTATATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131394367 24 + 190429646 TTTTTAAAAGCTATGTTATATATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130913373 24 + 189454096 TTTTTAAAAGCTATGTTATATATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904698 24 - 40319822 TTTTTAAAAGCTATGTTATATATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458825 24 - 9219162 TTTTTAAAAGCTATGTTGTATATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983694 24 + 135778131 TTTTTAAAAGCTATGTTGTATACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 129409739 24 - 190850796 TTTTAAAAAGCTATGTTGTATATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495212 24 - 25294431 TTTTAAAAAGCTATGTTGTATACA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049793 24 - 6311556 TTTTAAAAACCAACGTTGTATATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905677 24 + 15034901 TTTTCAAAAGCTACATTGTATATA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26311071 24 - 93316391 TTCTTAAAGGCTATATTATATATA i micMur3.chr14 C 0 C 0 s canFam3.chr19 44027976 24 - 53741614 TTTTTAAAAACAATATTGCATATA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726707 23 + 5974691 -TTTTAAAAACTATTTTTCATTTA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 933325 165 - 3201129 I e colAng1.NW_012114544v1 5981607 686 + 8656713 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=3560.000000 s hg38.chr9_KI270719v1_random 33394 1 + 176845 -T s panTro5.chr4 135058165 1 + 194502333 -T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38715 1 - 70559 -T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452274 1 - 115148730 -T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131394391 1 + 190429646 -T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130913397 1 + 189454096 -T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904722 1 - 40319822 -T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458849 1 - 9219162 -T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983718 1 + 135778131 -T i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5982293 1 + 8656713 -t i colAng1.NW_012114544v1 I 686 C 0 s calJac3.chr3 129409763 1 - 190850796 -T i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495236 1 - 25294431 -T i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049817 1 - 6311556 -T i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905701 1 + 15034901 -T i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26311095 1 - 93316391 -T i micMur3.chr14 C 0 C 0 s canFam3.chr19 44028000 1 - 53741614 -T i canFam3.chr19 C 0 I 172 s dasNov3.JH569232 1726730 1 + 5974691 G- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 933325 165 - 3201129 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=2010168.000000 s hg38.chr9_KI270719v1_random 33395 239 + 176845 GTTTACTTCTTTAA--------------AATTTTAAAAAT--------GTTT--GTGGCATTCACATAAAATACAGAAGAGACTAGCAATAAGTGACA-TACATGTACTTCAGGAC-----------------CTGAAAATTTATAT---GACTATATTTTTTT---CTTTCCTTAAAAAGAATATATTCAAATACATCATGAGAAAAATGTATAGCTTTAT----------AGTTAGGATAAACCTTTAATTCAAGTGCTGTTACTTGAATTAAGGATGCACAAGCCCCGGACTCT- s panTro5.chr4 135058166 239 + 194502333 GTTTACTTCTTTAA--------------AATTTTAAAAAT--------GTTT--GTGGCATTCACATAAAATACAGAAGAGACTAGCAATAAGTGACA-TACATATACTTCAGGAC-----------------CTGAACATTTATAT---GACTACATTTTTTT---CTTTCCTTAAAAAGAATATATTCAAATACATCATGAGAAAAATGTATAGCTTTAT----------AGTTAGGATAAACCTTTAATTCAAGTGCTGTTACTTGAATTAAGAATGCACAAGCCCCAGACTCT- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38716 239 - 70559 GTTTACTTCTTTAA--------------AATTTTAAAAAT--------GTTT--GTGGCATTCACATAAAATACAGAAGAGACTAGCAATAAGTGACA-TACATATACTTCAGGAC-----------------CTGAACATTTATAT---GACTACATTTTTTT---CTTTCCTTAAAAAGAATATATTCAAATACATCATGAGAAAAATGTATAGCTTTAT----------AGTTAGGATAAACCTTTAATTCAAGTGCTGTTACTTGAATTAAGGATGCACAAGCCCCGGACTCT- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452275 238 - 115148730 GTTTACTTCTTTAA--------------AATTTTAAAAAT--------GTTT---TGGAATTCACATAAAATACAGAAGAGACTAGCAATAAGTGATA-TACATATACTTCAAGAC-----------------CTGAACATTTATAC---GACTACATTTTTTT---CTTTCCTTAAAAAGAATATATTCAAATAAATCATGAGAAAAATATATAGCTTTAT----------AGTTAGGATAAACCTTTAATTCAAGTGCTGTTACTTGAATTAAGAATGCACAAGCCCCGGACTCT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131394392 241 + 190429646 GTTTACTTCTTTAA--------------AAGTTTAACAAT--------GTTT--GGGGCATTCACATAAAATATGGAAGAGACTAGCAATAAGTGAAA-TACAGATACTTCAGGAC-----------------CTGAACATTTATAT---CGCTACATTTTTTT-CTCTTTTCTTAAAAAGAATATATTCAAATATGTCATGAGGAAAATGTATAGCTTTAT----------AGTTAGAATAAACCTTTAATTCAAGTGCTGTTACTTGAATTAAGAACGCACAAGCCCCGGACTCT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130913398 241 + 189454096 GTTTACTTCTTTAA--------------AAGTTTAACAAT--------GTTT--GGGGCATTCACATAAAATATGGAAGAGACTAGCAATAAGTGAAA-TACAGATACTTCAGGAC-----------------CTGAACATTTATAT---CGCTACATTTTTTT-CTCTTTTCTTAAAAAGAATATATTCAAATATGTCATGAGGAAAATGTATAGCTTTAT----------AGTTAGAATAAACCTTTAATTCAAGTGCTGTTACTTGAATTAAGAACGCACAAGCCCCGGACTCT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904723 241 - 40319822 GTTTACTTCTTTAA--------------AAGTTTAACAAT--------GTTT--GGGGCATTCACATAAAATATGGAAGAGACTAGCAATAAGTGAAA-TACAGATACTTCAGGAC-----------------CTGAACATTTATAT---CGCTACATTTTTTT-CTCTTTTCTTAAAAAGAATATATTCAAATATGTCATGAGGAAAATGTATAGCTTTAT----------AGTTAGAATAAACCTTTAATTCAAGTGCTGTTACTTGAATTAAGAACGCACAAGCCCTGGACTCT- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4458850 240 - 9219162 ATTTACTTCTTTAA--------------AAGTTTAACAAT--------GTTT--GGGGCATTCACATAAAATATGGAAGAGACTAGCAATAAGTGAAA-TACAGATACTTCAGGAC-----------------CTGAACATTTATAT---CGCTACATTTTTTT--TCTTCTCTTAAAAAGAATATATTCAAATATGTCATGAGGAAAATGTATAGCTTTAT----------AGTTAGAATAAACCTTTAATTCAAGCGCTGTTACTTGAATTAAGAACGCACAAGCCCCGGACTCT- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983719 242 + 135778131 GTTTACTTCTTTAA--------------AATTTTAACAAT--------GTTT--GGGGCATTCACATAAAATATGGAAGAGATTAGCGATAAGTGAAA-TACAGATACTTCAGGAC-----------------CTGAACATTTATAT---CACTACATTTTTTTTTTCTTTTCTTAAAAAGAATATGTTCAAATATGTCATGAGAAAAATGTATAGTTTTAT----------AGTTAGAATAAACCTTTAATTCAAGTGCTGTTACTTGAATTAAGAATGCACAAGCCCCGGTCTCT- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5982294 239 + 8656713 gtttatttctttaa--------------cattttaacaat--------ATTT--GGGGCATTCACATAAAATATGGAAGAGACTAGCAATAAGTGAAA-TACAGATACTTCAGGAC-----------------CTGAACATTTATAT---CACTACTTTTTTTT---CTTTTCTTAAAAAGAATATGTTCAAATATGTCATGAGAGAAATGTATAGCTTTAT----------AGTTAGAATAAACCTTTAATTCAATTGCTGTTACTTGAATTAAGAATGCACAAGTCCCGGACTCT- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129409764 240 - 190850796 GTTTACTTCTTTAC--------------ATTTTGTAAAAT--------GTTT---TGGCACTCACATACAATAGGGAAGAGACTACCTATAAGTGAAA-TATATTTGCTTCAGGAC-----------------CTGAACATTTATAT---GACTACATTTGTTT-TTCTTTTTTAAAAAAGAATATATTCAAATATGTCATGAGAAAAATTTATAGGTTTGT----------AGTTAGCATAAAGCTTTAATTCAAGTGCTGTTACTTGATTTAAAAATGCGCAAGCCCTGGAATCT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495237 240 - 25294431 GTTTACTTTTTTAA--------------ATTTCATAAAAT--------GTTT--GTGGCACTCACATAAAATAGGGAAGAGACTACCTATAAGTGAAA-TATATTTACTTCAGGAC-----------------CTGAACATTTATAT---GACTGCATTTTTTT-TTCTTTTTT-AAAAAGAATATATTCAAATACGTCATGAGAAAAATTTTTAGGTTTGT----------AGTTAGCATAAAGCTTTAATTCAAGTGCTGTTACTTGATTTAAAAATGCACAAGCCCTGGAATCT- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4049818 239 - 6311556 GTTTACTTCTTTAA--------------ATTTTGTAAAAT--------GTTT--GTGGCACTCACATAAAATAGGGAAGAGACTACCTATAAGTGAAA-TATATTTACTTCAGGGC-----------------CTGAACATTTATAT---GACTACATT--TTT-TTCTTTTTTAACAAAGAATATATTCAAACATGTCATGAGAAAAATTTATAGGTTTGT----------AGTTAGCATAAAGCTTTAATTCAAGTGCTGGTACTCGATTTAAAAATGCACAAGCCCTGGAATCT- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905702 241 + 15034901 GTTTACTTCTTTAA--------------ATTTTTTAAAAT--------GTTT--GTGGCACTCACATAAAATAGGGAAGAGACTACCTATAAGTGAAA-TATATTTACTTCAGGAC-----------------CTGAAAATTTATAT---GACTACATTTTTTT-TTCTTTTTTAAGAAAGAATATATTCAAATATGTCATGAGAAAAATTTATAGGTTTGT----------AGTTAGCATAAAGCATTAATTCAAGTGCTGTTACTTGATTTAAAAATGCACAAGCCCTGGAATCT- i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26311096 237 - 93316391 GTTTACTTC---AA--------------AAATTTAAAAAT--------GTGTATGTGGCACTCACATGAAGTATGGAAGAGAAAAGCAATAAGTGAGATTATGTATACTTCAGGAC-----------------CAAAACATTTATAT---GATCACATTTTTTT---CTTTCCTTAGAAATAATATATTCAAATTTGTCATGGGAAAA--TTGCAACATTAT----------AGTTACAATAAACCTTTAATTCAAACACTGTTACTTGAATAAAACATGCACAAACCCTGAACTCT- i micMur3.chr14 C 0 I 268 s canFam3.chr19 44028173 248 - 53741614 gtctttTTTTTTAATTGCATATATCTTTAGTTTTAAAAATCTAAAATAGTTT--GTAGTACTCACATAAAATATTAAAGATGATAGCAACAAATGAAAGTAAATCTATTTTAGGat-----------------ataaatatttatat---gatta-------tt-atttttccttaaaaataatatattaaaatCTATTGTAGGAAAAAATTACA-TGTTAG----------AGTTAGCATAAGCCCTTATTTCTAATGTTGTTACTTGTATTAATCATGCACAAGCAT--------- i canFam3.chr19 I 172 C 0 s dasNov3.JH569232 1726731 260 + 5974691 ATTTATCATTTAAA--------------AAATC---AAAC--------ATTT--GTGACA-----GAAAAATACAGAAGATAGTAGCAACAGGTAAAA-AATGTAAACTTCAGGACTAAATGAAAATGTACTTCAGGACATTTATATGTAGATTATATAGTTTT---GTTTCCTTAAAAATAACATATTCAAAATTTTCATGGGGAAAAT-TATAATTGTATTATTTGCAAAAATTAAAAGAAAACC-TACTTCAAGTGCTAATATTTGTGTTAATCATACATGTGCCCAGGTCCTCT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 933325 165 - 3201129 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=908610.000000 s hg38.chr9_KI270719v1_random 33634 135 + 176845 ACTCCACAAACCCCACCCGCTCTTCTCACCACATAAATACCTAGGGAGAGGGATCTGTCTGAAGGAACCTTTCCCACAACAGCCTTTATTCAAAATGACACACCTGCCACTTTCTTGATGCCTACTCTTGTACTC s panTro5.chr4 135058405 135 + 194502333 ACTCCACAAACCCCACCCGCTCTTCTCACCACAAAAATACCTGGGGAGAGGGATCTGTCTGAAGGAACCTTTCCCACAACGCCCTTTATTCAAAATGACACACCTGCCACTTTCTTGATGCCTACTCTTGTACTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 38955 134 - 70559 ACTCCACAAACCCCACCCGCTCTTCTCACCACATAAATACCTAGGGAGAGGGATCTGTCTGAAGGAACCTTTCCCAC-ACAGCCTTTATTCAAAATGACACACCTGCCACTTTCCTGATGCCTACTCTTGTACTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452513 135 - 115148730 ACTCCACAAACCCCACCCGCTCTTCTCATCACAGAAATACCTAGGGAGAGGGATCTGTCTGAAGGAGCCTTTCCCACAACGGCCTTTATTCAAAATGACACACCTGCCACGTTCCTGATGCCTACTCTTATACTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131394633 135 + 190429646 CCTCCACAAACCGCACTCGCTCTTCTCACCACAGAAATACCTAGGGAGAGGGATCTGTCTGAAGGAGCGTTTCTCACAACAGCCTTTATTCAAAATGACACGCCTGCCACTTTCCTGACGCCTACTCTTCTGCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130913639 135 + 189454096 CCTCCACAAACCGCACTCGCTCTTCTCACCACAGAAATACCTAGGGAGAGGGATCTGTCTGAAGGAGCGTTTCTCACAACAGCCTTTATTCAAAATGACACGCCTGCCACTTTCCTGACGCCTACTCTTCTGCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34904964 135 - 40319822 CCTCCACAAACCGCACTCGCTCTTCTCACCACAGAAATACCTAGGGAGAGGGATCTGTCTGAAGGAGCGTTTCTCACAACAGCCTTTATTCAAAATGACACGCCTGCCACTTTCCTGACGCCTACTCTTCTGCTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459090 135 - 9219162 CCTCCACAAACCGCACTCGCTCTTCTCACCACAGAAATACCTACGGAGAGGGATCTGTCTGAAGGAGCGTTTCTCACAACAGCCTTTATTCAAAATGACACGCCTGCCGCTTTCCTGACGCCTACTCTTCTGCTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78983961 129 + 135778131 ACTCCACAAACCCCACTTGCTCTTCTCACCACAGAAATACCTAGGGAGAGGGATCTGTCTGAAGGAGCGTTTCTCACAACAGCCTTTATTCAAAATGACGCGCCTGCCACTTTCCTGACGCCTACT------CTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5982533 135 + 8656713 ACTCCACAAACCCCACTCGCTCTTCTCACCACAGAAATACCTAGGGAGAGGGATCTGTCTGAAGGAGCGTTTCTCACAACAGCCTTTATTCCAAATGACACACCTGCCACTTTCCTGACGCCTACTCTTCTACTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410004 134 - 190850796 ACTCCACAAAACCATTTCACTCTATTCCTCACAGAAATACTTAGGGAGAGGGGTCTGCCTGAAGGAGCCTCTCCCACAATGGCCTATATTCGAAATGATACCCCCACCATTTTCCTGACGCCTG-TCTTCCACTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495477 134 - 25294431 ACTCCACAAAAACCATTCACTCTAATCGTCGTAGAAATACCTAGGGAGAGGGGTCTGCCTGAAGGAGCATCTCCCACAATGGCCTGTATTCAAAATGACACCCCCACCGTGTTCCTGACGCCTG-TCTTCTGCTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050057 133 - 6311556 ACTCCATAAAACCCATTCACTCTATTGGTCACAGAAATACCTAGGGAGAGGGATCTGCCTGAAGAAGCCCCTCCCACAATGGCCTATATTCAAAATGACA-CCCCACCATTTTCCTGATGCCTG-TCTTCTACTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14905943 134 + 15034901 ACTCCACAAAACCCATTCACTCTATTCATCACAGAAATACCTAGGGAGAGGGGTCTGCCTGAAGGAGCCTCTCCCACAATGGCCTATATTCAAAATGACACCCCCACCATTTTCCTGACACCTG-TCTTCTACTC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44028421 90 - 53741614 -------------------------------------------GGAAGAGAGGTCTGTCTGGTGCTGACCCTCCCAAGAGGGCCTTTATTCC-ACTGATGT-CCCAACATTTCTCTGACTCCTGCTCACCCAAAC i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1726991 93 + 5974691 --------------------GCTTCT------GGAAATACTGAGGGGAGGGTATCTGTCTGGAAGA-----TCCCAG------CTTTATTCCAAATGATGC-CCCAGCACTGCTCTGACTATTGCCTGCCT---- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26311333 268 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 933325 165 - 3201129 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=1180234.000000 s hg38.chr9_KI270719v1_random 33769 139 + 176845 CAACTGCAGTGTGATTCATTACACACAGTTTGCTTGTATGTT--------ATATGACAGTGATTACATCAAGGATTTG--GGTACTAGCTaactgaactgatatatttgaaagtactttataaaacagaaagtgctgaacaaCCATTAA s panTro5.chr4 135058540 139 + 194502333 CAACTACCGTGTGATTCATTATACACAGTTTGCTTGTATGTT--------ATATGACAGTGATTACATCAAGGATTTG--GGTACTAGCTAACTGAATTGGTATATTTGAAAGTACTTTATAAAACAGAAAGTGCTGAACAACCATTAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39089 139 - 70559 CAACTGCAGTGTGATTCATTACACACAGTTTGCTTGTATGTT--------ATATGACAGTGATTACATCAAGGATTTG--GGTACTAGCTaactgaattgatatatttgaaagtactttataaaacagaaagtgctgaacaaCCATTAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452648 135 - 115148730 CAACTCCAATGTGATTCATTACACACAGTTTACT--TATGTT--------ATATGACAGTGATTATGTCAAGGATTTG--GGTACTAGCTGACTGAATTGATATATTTGAAAGTACTTTATAAAAC--AAAGTGCTGAACAACCATTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131394768 139 + 190429646 CAACTCCAGTGTGATTCATTACACACAGTTTGCTTATATGTT--------ATATGACAGTGATTACATCAAGGATTTG--GGTACTAGCTAACTGAATTGATATATTTGAAAGTACTTTATAAAACAGAAAGTGCCGAACAACCATTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130913774 139 + 189454096 CAACTCCAGTGTGATTCATTACACACAGTTTGCTTGTATGTT--------ATATGACAGTGATTACATCAAGGATTTG--GGTACTAGCTAACTGAATTGATATATTTGAAAGTACTTTATAAAACAGAAAGTGCCGAACAACCATTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905099 139 - 40319822 CAACTCCAGTGTGATTCATTACACACAGTTTGCTTGTATGTT--------ATATGACAGTGATTACATCAAGGATTTG--GGTACTAGCTAACTGAATTGATATATTTGAAAGTACTTTATAAAACAGAAAGTGCCGAACAACCATTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459225 139 - 9219162 CAACTGCAGTGTGATTCATTACACACAGTTTGCTTGTATGTT--------ATATGACAGTGATTACATCAAGGATTTG--GGTACTAGCTAACTGAATTGATATATTTGAAAGTACTTTATAAAACAGAAAGTGCCGAACAACCATTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984090 139 + 135778131 CAACTCCAGTGTGATTCATTACACACAGTTGGCTTGTATGTT--------ATATGACAGTGATTACATCAAGGATTTG--GGTACTAGCTAACTGAATTGATATATTTGAAAGTACTTTATAAAACAGAAAGTGCCGAACAACCATTAA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5982668 139 + 8656713 CAACTCCAGTGTGACTCATTACACACAGTTTGCTTGTATGTT--------ATATGACAGTGATTACATCAAGGATTTA--GATACTAGCTAACTGAATTGATATATTTGAAAGTACTTTATAAAACAGAAAGTGCCGAACAACCATTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410138 139 - 190850796 CAACTCCAGTGTCATTCATTACACACAATTTGCTTGTACACT--------GTATGACAGTGATTACATCAAGGATTTG--GATACTAGCTaactgaattgatatatttgaaagtactttataaaatagaaagtgctgaacaCCCATTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495611 137 - 25294431 CAACTC--GTGTCATTCATTACACACAATTTGCTTGTACGCT--------GTATTACAGTGATTGCATCAAGGATTTG--GATACTAGCTAACTGAACTGATATATTTGAAGGTACTTTATAAAATCGGAAGTGCTGAGCACCCATTAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050190 139 - 6311556 CAACTCCAGTGTCATTCATTACACACAATTTGCTTGTATGCT--------GTATGACAGTGATTACATCAAGGATTTG--GATACTAGttaactgaattaatatatttgaaagcactttataaaatagaaagtgctgaacaCCCATTAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906077 139 + 15034901 CAACTCCAGTGTCATTCATTACACACAATTTGCTTGTACGCT--------GTATGACAGTGATTACATCAAGGATTTG--GATACTAGCTAACTGAATTGGTATATTTGAAAGTACTTTATAAAATAGAAAGTGCTGAACACCCATTAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 933490 69 - 3201129 CAACCATAATGTAAAT---------------------------------------GCAGTGATTAAGTTAATAATC------------------------ATGTGT-----AGTACTTT----------AATTTCTGA--AACCTCTAT i otoGar3.GL873702 I 165 C 0 s canFam3.chr19 44028511 144 - 53741614 CAAGTCTAGCGTAATTCATTACACA-AATATGTTTGTATGTTAATATC--ATATGGCCACAATTACCTTAAGGATTTG--GGTACTAGCTAATTGAATTGATACATTTGAACATATTTTGTAAACTAGAAAGCTCTAAAAAGCTATTAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1727084 138 + 5974691 CAACCCCAGTGAAATTGTTTACACCCAATTTACTTCTATGTTGATTCTAAATATGACAGCTATTGCCTCAAAAATGTGGTGGTAATAGTT-----AATTGATCTACTTGAAAGTACTTTAGAA------AAGTTCTAACTAAATATTAA i dasNov3.JH569232 C 0 I 13769 e micMur3.chr14 26311333 268 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=108896.000000 s hg38.chr9_KI270719v1_random 33908 17 + 176845 GTATACAGAATGATTTG s panTro5.chr4 135058679 17 + 194502333 GTATATGGAATGATTTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39228 17 - 70559 GTATACAGAATGATTTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452783 17 - 115148730 GTATATGGAATGATTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131394907 17 + 190429646 GTATATGGAATAATTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130913913 17 + 189454096 GTATATGGAATAATTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905238 17 - 40319822 GTATATGGAATAATTTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459364 17 - 9219162 GTATATGGAATAATTTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984229 17 + 135778131 GTATATGGAATAATTTG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5982807 17 + 8656713 GTATATGGAATAATTTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410277 17 - 190850796 GTATATGGAGTGATTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495748 17 - 25294431 GTATACGGAGTGATTTG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050329 17 - 6311556 GTAAACGGAGTGATTTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906216 17 + 15034901 GTATACAAACTGATTTG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 933559 17 - 3201129 TTTTGAAAAACAAATTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44028655 6 - 53741614 GAATAC----------- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26311333 268 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1727222 13769 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=369159.000000 s hg38.chr9_KI270719v1_random 33925 44 + 176845 GCAACAATCATATGTAGTACCATATTTTCTGAAATATC-TATTTC s panTro5.chr4 135058696 44 + 194502333 GCAACAATCATATGTAGTACCACATTTTCTGAAATATC-TATTTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39245 44 - 70559 GCAACAATCATATGTAGTACCATATTTTCTGAAATATC-TATTTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452800 44 - 115148730 GCAACAATCATATGCAGTACCATATTTTCTGAAATATC-TATTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131394924 44 + 190429646 GCAACAATCATATGCAGTACCATATTTTCTGAAATCTC-TATTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130913930 44 + 189454096 GCAACAATCATATGCAGTACCATATTTTCTGAAATCTC-TATTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905255 44 - 40319822 GCAACAATCATATGCAGTACCATATTTTCTGAAATCTC-TATTTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459381 44 - 9219162 GCAACAATCATATGCAGTACCATATTTTCTGAAATCTC-TATTTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984246 45 + 135778131 GCAACAATCATATGCAGTACCATATTTTCTGAAATCTCTTATTTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5982824 44 + 8656713 GCAACAATCATATGCAGTACCATATTTTCTGAAGTCTC-TATTTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410294 44 - 190850796 GCAGCGATCATAGGCAGTACCATATTTTCTGAAATATC-TATTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495765 44 - 25294431 GCAGCGATCATAGGCAGTACCATATTTTCTGAAATATC-TACTTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050346 44 - 6311556 GCAGTGATCATAGGCAGTACCATATTTTCTGAAATATC-TATTTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906233 44 + 15034901 GCAGCGATCATAGGCAGTACCATATTTTCTGAAATATG-TATTTC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26311601 41 - 93316391 GCAACAATCATGTGTAGTACTTTAATTTCTGAAACCTC----TTT i micMur3.chr14 I 268 C 0 s canFam3.chr19 44028661 34 - 53741614 ----------TATGTAGTATTACACTTTCTAAATTGTT-TTTGAC i canFam3.chr19 C 0 I 6080 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1727222 13769 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 933576 0 - 3201129 C e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=656548.000000 s hg38.chr9_KI270719v1_random 33969 80 + 176845 TTAAAAAACAAGTTTCATTAAGTATATTATTTGCTGAATAATCTCTCAAAGGTCATGTTTTCATATAGCTACTATTATTG- s panTro5.chr4 135058740 77 + 194502333 TTAAAAAACAAGTTTCATTAAGTGTATTATTTGCTGAATAATCTCTCAAAGGTCATGTTTTCATATAG---CTATTATTG- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39289 80 - 70559 TTAAAAAACAAGTTTCATTAAGTGTATTATTTGCTGAATAATCTCTCAAAGGTCATGTTTTCATATAGCTACTATTATTG- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452844 80 - 115148730 TTAAAAAACAAGTTTCATTAAGTGTATTATTTGCTAAATAATCTCTCAAAGGTCACGTTTTGATATAGCTACTATTATTG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131394968 81 + 190429646 TTTAAAAACACGTTTCATTAAGTGTATTATTTGCTGAATAATCTCTCAAAGGTCACGTTTTGATATAACTGCTATTATTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130913974 81 + 189454096 TTTAAAAACACGTTTCATTAAGTGTATTATTTGCTGAATAATCTCTCAAAGGTCACGTTTTGATATAACTGCTATTATTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905299 81 - 40319822 TTTAAAAACACGTTTCATTAAGTGTATTATTTGCTGAATAATCTCTCAAAGGTCACGTTTTGATATAACTGCTATTATTGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459425 81 - 9219162 TTTAAAAACACGTTTCATTAAGTGTATTATTTGCTGAATAATCTCTCAAAGGTCACGTTTTGATATAACTGCTATTATTGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984291 81 + 135778131 TTTAAAAACACGTTTCATTAAGTGTATTATTTGCTGAATAATCTCTCAAAGGCCACATTTTGATATAACTACTATTATTGC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5982868 80 + 8656713 TTTAAAAACACGTTTCATTAAGTGTATT-TTTGCTGTATAATCTCTCAAAGGTCACGTTTTGATATAACTACTATTATTGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410338 80 - 190850796 TT-AAAAACAAGTTTGATAAAGTATATTATTTGCTGAAAATTCTCTCAAAGGTGACTTTTTGATATAGCTACTAGTATTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495809 80 - 25294431 TT-AAAAGCAAGTTTGATAAAGTATATTATTTGCTGAAAATTCTCTCAAAGGTCACGTTTTGATATAGCTACTAGTATTGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050390 80 - 6311556 TT-AAAAACAAGTGTAATAAAGTATATTATTTGCTGAAAATTCTCTCAAAGTTCACGTTTTGACATAGCTACCAGAGTTGC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906277 80 + 15034901 TT-AAAAACAAGTTTGATAAAGTATATTATTTGCTGAAAATTCTCTCAAAGGTCACGTTTTGATATAGCTACTAGTATTGC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26311642 81 - 93316391 TTAAAAAACAAGTTTGATTCAGTATATTGCTTTCTGAATAATCTCTTAAAGGTCAGGTTTATATATAGCAACCATTATTGC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 933576 65 - 3201129 ---------------AATTCAGTATATTGCTTACTGAAATATCTCTTACAGTTCAGGTTTATAGACAGCAACAATT-TTCT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44034775 80 - 53741614 TTAAAAAACAAGTTTGATTAAGTATATTGTTGGCTGAATGATCT-TTAAAGGTCGGGTTTGTATATGGTCACCACTATTGC i canFam3.chr19 I 6080 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1727222 13769 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=829796.000000 s hg38.chr9_KI270719v1_random 34049 77 + 176845 CATTTTGAAATCAAACATTATTTTCTT--TGCCATTTCAGAGAAGCCCTTGGTAATCCAGCCCGCAAGTGCAATTCATG s panTro5.chr4 135058817 77 + 194502333 CATTTTGAAATCAAACATTATTTTCTT--TGCCATTTCAGAGAAGCCCTTGGTAATCCAGCCCGCAAATGCAATTCATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39369 77 - 70559 CATTTTGAAATCAAACATTATTTTCTT--TGCCATTTCAGAGAAGCCCTTGGTAATCCAGCCCGCAAATGCAATTCATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90452924 77 - 115148730 CATTTTGAAATCAAACATTATTTTCTT--TGCCATTTCAGAGAAGCCCTTGGTAATCCAGCCCACAAATGCAATTCATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395049 77 + 190429646 CATTTTGAAATCAAATATTATTTCCTT--TGCCATTTCAGAGAAGCCCTCGGTAATCCAGCCCGCAAATGCAATTCAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914055 77 + 189454096 CATTTTGAAATCAAATATTATTTCCTT--TGCCATTTCAGAGAAGCCCTCGGTAATCCAGCCCGCAAATGCAATTCAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905380 77 - 40319822 CATTTTGAAATCAAATATTATTTCCTT--TGCCATTTCAGAGAAGCCCTCGGTAATCCAGCCCGCAAATGCAATTCAGG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459506 77 - 9219162 CATTTTGAAATCAAATATTATTTCCTT--TGCCATTTCAGAGAAGCCCTCGGTAATCCAGCGCGCAAAGGCAATTCAGG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984372 77 + 135778131 CATTTTGAAATCAAACATTATTTCCTT--TGCCATTTCAGAGAAGCCCTTGGTAATCCAGCCCGCAAACGCAATTCAGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5982948 77 + 8656713 CATTTTGAAATCAAACATTATTTCCTT--TGCCATTTCAGAGAAGCCCTCGGTAATCCAGTCCGCAAATGCAATTCAGG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410418 77 - 190850796 CAATTTGAAATCAAACATTATTTTCTT--TGCCATTTTAGAGAAGCCCTTGGTGGTCCAGCCTGCAAATGCGATTCATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495889 77 - 25294431 CATTTTGAAATCAAACATTATTTTCTT--TGCCATTTTAGAGAAGCCCTTGGTGGTCCAGCCTGCAAATGCAATTCATG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050470 77 - 6311556 CATTTTGAAATCAAACATTATTTTCTT--TGCCATTTTAGAGAAGCCCTGGTTGGTCCAGCCTGCAAATGCAATTCATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906357 77 + 15034901 CATTTTGAAATCAAACATTATTTTCTT--TGCCATTTTAGAGAAGCCCTTGGTGGTCAAGCCTGCAAATGCAATTCATG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26311723 77 - 93316391 CATTTTTGAATCAAACATTATTCTTTT--TGCCATTTCAGACAAGCCCTTGGTAGTCTAGCCCACAAATCTAATTCATG i micMur3.chr14 C 0 I 41 s otoGar3.GL873702 933641 77 - 3201129 CTGTTTTGATTCAAGCATTATTCTCTT--TGCCATTACAGACAAGCCCTTGGTAGTCCAAAACACAAATCCAGTTCATG i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44034855 77 - 53741614 CATTTTGGAATCAAGTGTTATTTTCCT--TGCCTTTTCATACAAGCCCTAGGTAGTCCTGCTCTCAACTCCAATTCGTG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1740991 78 + 5974691 CATTTTGAAATAACGCTTTTTTTTTCTTCTGCCATTT-AGACAACCCCTAGGTAGTCAGCTTGAAAAATTCCATCCATA i dasNov3.JH569232 I 13769 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=348647.000000 s hg38.chr9_KI270719v1_random 34126 47 + 176845 CGCATGGCTCTAAAGAGAAATGGGCAAACAAAAAGAAGATTAACTAC-------- s panTro5.chr4 135058894 47 + 194502333 GGCATGGCTCTAAAGAGAAATAGGCAAACAAAAAGAAGATTAACTAC-------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39446 47 - 70559 CGCATGGCTCTAAAGAGAAATGGGCAAACAAAAAGAAGATTAACTAC-------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453001 47 - 115148730 GACATGGCTCTAAAGAGAAATAGGCAAACAAAAAGAAGATTAACTAC-------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395126 47 + 190429646 GGCATGGCTCTAAAGAGAAATAGATAAACAAAAAGAAGATTAACTAC-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914132 47 + 189454096 GGCATGGCTCTAAAGAGAAATAGATAAACAAAAAGAAGATTAACTAC-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905457 47 - 40319822 GGCATGGCTCTAAAGAGAAATAGATAAACAAAAAGAAGATTAACTAC-------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459583 47 - 9219162 GGCATGGCTCTAAAGAGAAATAGATAAACAAAAAGAAGATTAACTAC-------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984449 47 + 135778131 GGCATGGCTCTAAAGAGAAATAGATACACAAAAAGAAGACTAACTAC-------- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5983025 47 + 8656713 GGCTTGGCTCTAAAGAGAAATAGACAAACAAAAAGAAGATTAACTAC-------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410495 47 - 190850796 GGCATTTCTGTAAAGAGAAATAGATAAACAAAAAGAAGATTTAGTAC-------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6495966 45 - 25294431 GGCATTTCTGT--AGAGAAATAGGCAAACAAAAAGAAGATTTAGCAC-------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050547 47 - 6311556 GGCATTTCTGTAAAGTGAAATAGGCAAACTAAAAGAGGATTTAGTGC-------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906434 47 + 15034901 GGCATTTCTGTAAAGAGAAATAGGCAAACAAAAAGAAGATTTAGTAC-------- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 933719 40 - 3201129 GGCAT---CATAAAGAGAAACAGACAAACAAAGAGAAGGCTAC------------ i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44034932 39 - 53741614 GGCATTTTCCTAAAGAGAAACAGGAA----AAGAGAAGGCTAT------------ i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1741069 55 + 5974691 AGCATTTTCACAAGGAGAAGCAATTAGGAAAAAAAAAAGTTAAGAAAACTGACTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26311800 41 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=296902.000000 s hg38.chr9_KI270719v1_random 34173 32 + 176845 ACATTCAATAATCATTTATTTATTTTCTTAGA s panTro5.chr4 135058941 32 + 194502333 ACATTCAATAATCATTTATTTATTTTCTTAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39493 32 - 70559 ACATTCAATAATCATTTATTTATTTTCTTAGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453048 32 - 115148730 ACATTCAATAATCATCTGTTTATTTTCTTAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395173 32 + 190429646 ACATTCAATAATCATTTATTTATTTTCTTAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914179 32 + 189454096 ACATTCAATAATCATTTATTTATTTTCTTAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905504 32 - 40319822 ACATTCAATAATCATTTATTTATTTTCTTAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459630 32 - 9219162 ACATTCAATAATCATTTATTTATTTTCTTAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984496 28 + 135778131 ACATTCAATAA----TTATTTATTTTCTTAGA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5983072 32 + 8656713 ACATTCAATAATCATTTATTTATTTTCTTAGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410542 28 - 190850796 ACATTCAATACTCATGTGTTTATTTT----AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496011 28 - 25294431 ATATTCAATAATCATTTGTTTATTTT----AA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050594 28 - 6311556 ACATTCAATAATCATTTGTTTATTTT----AA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906481 27 + 15034901 ACATTCAATAATCACTTG-TTATTTT----AA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26311841 32 - 93316391 ACATTCAATAATCATTTATTTATTTTGTTAGA i micMur3.chr14 I 41 I 499 s otoGar3.GL873702 933759 31 - 3201129 AAATTAAATAATCATTTATTTATTTTGTTAG- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44034971 32 - 53741614 GTATTCAGTAATCACTTGTTTATTTTGTTAGA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1741124 32 + 5974691 GCATTCAGTAATCTCTTATTCATTATGTTATA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=276519.000000 s hg38.chr9_KI270719v1_random 34205 43 + 176845 GATATCTACAGTAGCTCTCTCTTATCCTTATTTTAATAAATGC s panTro5.chr4 135058973 41 + 194502333 GATATCTATAGTAG--CTCTCTTATCCTTATTTAAATAAATGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39525 43 - 70559 GATATCTACAGTAGCTCTCTCTTATCCTTATTTTAATAAATGC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453080 43 - 115148730 GATATCTATAGTAGCTCTCTCTTATCCTTATTTTAATAAATGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395205 43 + 190429646 GATATCTATAGTAGCTCTCTCTTATCCTTATTTTAATAAATGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914211 43 + 189454096 GATATCTATAGTAGCTCTCTCTTATCCTTATTTTAATAAATGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905536 43 - 40319822 GATATCTATAGTAGCTCTCTCTTATCCTTATTTTAATAAATGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459662 17 - 9219162 GATATCTATAGTAGCTC-------------------------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984524 43 + 135778131 GATATCTATAGTAGCTCTTTCTTATCCTTATTTTAATAAATGC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5983104 32 + 8656713 GATATCTATAGTAGCTCTCTCTTATCCttttt----------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410570 40 - 190850796 GATATCT---GTAGTTTTGTCTTATTCTTATTTTAATAAATGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496039 43 - 25294431 GATATCTGTAGTAGTTTTCTCTTATTCTTATTTTAATAAATGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050622 43 - 6311556 GATAGCTATAGTAGTTTTCTCTTGTTCTTATTTTAATAAATGC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906508 43 + 15034901 GATATCTATAGTAGTTTTCTCTTATTCTTATTTTAATAAATGC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 933790 27 - 3201129 ----------GTACTTCTCTTTTA------TTTTAATATATGC i otoGar3.GL873702 C 0 I 52 s canFam3.chr19 44035003 37 - 53741614 AGTGTTAATAGTAGAACTCACTTA------TTTTAATAAATGT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1741156 34 + 5974691 AGTATTTATGGT---------TTCATTTTATTTCAAGAAATGT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=133517.000000 s hg38.chr9_KI270719v1_random 34248 26 + 176845 TGA---CGTACAGAATTA----GTGAGAT-TTTT s panTro5.chr4 135059014 26 + 194502333 TGA---TGTACAGAATTA----GTGAGGT-TTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39568 26 - 70559 TGA---CGTACAGAATTA----GTGAGGT-TTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453123 26 - 115148730 TGA---CGTACAGAATTA----GTGAGGT-TTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395248 26 + 190429646 TGA---CATACTGAATTA----GTGAAGT-TTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914254 26 + 189454096 TGA---CATACTGAATTA----GTGAAAT-TTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905579 26 - 40319822 TGA---CATACTGAATTA----GTGAAGT-TTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459679 17 - 9219162 ------------GAATTA----GTGAAGT-TTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984567 26 + 135778131 TGA---CATGCAGAATTA----GTGAGGT-TTTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 5983136 5 + 8656713 ----------------------------t-tttt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410610 25 - 190850796 TGA---CATACAGAATTA----GTGGGG--TTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496082 26 - 25294431 TGA---CATACAGAATTA----GTGAGGT-TTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050665 26 - 6311556 TGA---CATATAGAATTA----GTGAGGT-TTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906551 26 + 15034901 TGA---CATACAGAATTA----GTGAGGT-TTTC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44035040 31 - 53741614 TGA---AATACCCACTTACTTTGTGAGATCCTTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1741190 29 + 5974691 TGAATGCATACATTATTT----GTGGAAT-CCTT i dasNov3.JH569232 C 0 I 1 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 933817 52 - 3201129 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=23267.000000 s hg38.chr9_KI270719v1_random 34274 5 + 176845 GGTAA s panTro5.chr4 135059040 5 + 194502333 GGTAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39594 5 - 70559 GGTAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453149 5 - 115148730 GGTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395274 5 + 190429646 GGTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914280 5 + 189454096 GGTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905605 5 - 40319822 GGTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459696 5 - 9219162 GGTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984593 5 + 135778131 GTTtt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 129410635 5 - 190850796 GGTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496108 5 - 25294431 GGTTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050691 5 - 6311556 GGTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906577 5 + 15034901 GGTTA i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44035071 5 - 53741614 GGCTA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1741219 1 + 5974691 I e rhiBie1.NW_016806351v1 1170991 66546 - 1973658 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 933817 52 - 3201129 I e colAng1.NW_012114544v1 5983141 0 + 8656713 C e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=6392.000000 s hg38.chr9_KI270719v1_random 34279 1 + 176845 T s panTro5.chr4 135059045 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39599 1 - 70559 T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453154 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395279 1 + 190429646 T i rheMac8.chr5 C 0 I 11 s macFas5.chr5 130914285 1 + 189454096 T i macFas5.chr5 C 0 I 11 s macNem1.NW_012010911v1 34905610 1 - 40319822 T i macNem1.NW_012010911v1 C 0 I 19 s cerAty1.NW_012000798v1 4459701 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 I 7 s chlSab2.chr7 78984598 1 + 135778131 t i chlSab2.chr7 C 0 I 18 s rhiBie1.NW_016829560v1 944 1 - 1663 t i rhiBie1.NW_016829560v1 n 66546 n 66546 s calJac3.chr3 129410640 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496113 1 - 25294431 C i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050696 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906582 1 + 15034901 T i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44035076 1 - 53741614 T i canFam3.chr19 C 0 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1741219 1 + 5974691 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 933817 52 - 3201129 I e colAng1.NW_012114544v1 5983141 0 + 8656713 C e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=1820.000000 s hg38.chr9_KI270719v1_random 34280 2 + 176845 AA s panTro5.chr4 135059046 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39600 2 - 70559 AA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453155 2 - 115148730 AA i nomLeu3.chr7b C 0 C 0 s canFam3.chr19 44035077 2 - 53741614 AA i canFam3.chr19 C 0 I 152 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1741219 1 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 933817 52 - 3201129 I e aotNan1.NW_018507635v1 14906583 0 + 15034901 C e cebCap1.NW_016107420v1 4050697 0 - 6311556 C e saiBol1.JH378129 6496114 0 - 25294431 C e calJac3.chr3 129410641 0 - 190850796 C e colAng1.NW_012114544v1 5983141 0 + 8656713 C e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M e chlSab2.chr7 78984599 18 + 135778131 I e cerAty1.NW_012000798v1 4459702 7 - 9219162 I e macNem1.NW_012010911v1 34905611 19 - 40319822 I e macFas5.chr5 130914286 11 + 189454096 I e rheMac8.chr5 131395280 11 + 190429646 I a score=828329.000000 s hg38.chr9_KI270719v1_random 34282 153 + 176845 TA----ttttttt-------------tttgaggcagagtcttgctctgccaaccaggttgaagtgcagtggtgcaatctccactccctgcaacctccacctcctgggtttaagcgattctcctgcctcagcctcctgagtagctg-----acaggtgcgcaccaccacgccctgg s panTro5.chr4 135059048 152 + 194502333 TA-----tttttt-------------tttgaggcagagtcttgctctgccatccaggttgaagtgcagtgatgcaatctccactccctgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcctgagtagctg-----acaggtgctcaccaccacgccccgg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39602 154 - 70559 TAt---ttttttt-------------tttgaggcagagtcttgctctgccaaccaggttgaagtgcagtggtgcaatctccactccctgcaacctccacctcctgggtttaagcgattctcctgcctcagcctcctgagtagctg-----acaggtgcgcaccaccacgccctgg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453157 153 - 115148730 TA----TATAttt-------------tttgaggcagagttttgctctgccacccaggttgaagtgcagtggtgcaatctccactccctgcaacctccgcctcctgggttcaagtgattctcctgcctcagcctcctgagtagctg-----acaggtgtgcaccaccacgccctgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395291 151 + 190429646 --ttttttttttt-------------tt--aggcagagtcttgctctgctacccaagctgtagtgcagtcgcacaatctcca--ctctgcaacctccccctcttgggttcaagtgattctgctgcctcagcctcctgagtagctg-----acaggtgcgcaccgccacgccccga i rheMac8.chr5 I 11 C 0 s macFas5.chr5 130914297 153 + 189454096 --ttttttttttt-------------tttaaggaagagtcttgctctgctacccaagctgtagtgcagtcgcacaatctcca--ctctgcaacctccccctcttgggttcaagtgattctgctgcctcagcctcctgagtagctg-----acaggtgcgcaccgccacgccccga i macFas5.chr5 I 11 C 0 s macNem1.NW_012010911v1 34905630 153 - 40319822 --ttttttttttt-------------tttgaggcagagtcttgctctgctacccaagctgtagtgcagtcgcacaatctcca--ctctgcaacctccccctcttgggttcaagtgattctgctgcctcagcctcctgagtagctg-----acaggtgcgcaccgccacgccccga i macNem1.NW_012010911v1 I 19 C 0 s cerAty1.NW_012000798v1 4459709 153 - 9219162 --ttttttttttt-------------tttgaggcagagtcttgctctgctacccaagctgtagtgcagtcgcacaatctcca--ctctgcaacctccccctcttgggttcaagtgattctgctgcctcagcctcctgagtagctg-----acaggtgcgcaccgccacgccccga i cerAty1.NW_012000798v1 I 7 C 0 s chlSab2.chr7 78984617 153 + 135778131 --tgtttgtttgt-------------tttgaggcaaagtcttgctctgctacccaagctatagtgcagtcgcacaatctcca--ctccgcaacctccccttcttgggttcaagtgattctgctgcctcagcctcctgagtagctg-----acaggtgcgcaccgccacgccctga i chlSab2.chr7 I 18 I 181 s colAng1.NW_012114544v1 5983141 155 + 8656713 ------ttttttg-------------tctgagacggagtctcgctctgtcgcccgggctggagtgcagtggcctgatctcaggtcactgcaagctccgcctcccgggtttacgccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccacctcgtccgg- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410641 135 - 190850796 ---AACttttttt-------------gagggggcggagtcttgctgtgctacccactctatagtgtagtggccctatctccactcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgagg------------------------caa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496114 171 - 25294431 ---ATCtttttttttttttttttttctttgaggcggagtcttgctgtgccacttactctgtagtgtagtggccctatctccactca-ggcaacctctgcctcttggggtcaagcaattctcctgcctcagcctccagagtagctgggactacaggtgtgtgccactatgccccga i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050697 157 - 6311556 ---AACttttttt--------------ttgagacggagtcttgctgtgccacccactctgtagtatagtggccctatctccactcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctccagagtagctgggactacaggtgtgtgccactacacc-tga i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906583 160 + 15034901 ---AACttttttt------------ttttgaggcggagtcttgctgtgctacctactctgtagtgtagtggccctatctccactcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagccttcagagtagctgggactacaagtgcatgccactacgccccga i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1741219 1 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035079 152 - 53741614 I e otoGar3.GL873702 933817 52 - 3201129 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=-280.000000 s hg38.chr9_KI270719v1_random 34435 6 + 176845 ctaa----------tt s panTro5.chr4 135059200 4 + 194502333 ctaa------------ i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39756 5 - 70559 ctaa-----------t i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453310 4 - 115148730 ctaa------------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395442 4 + 190429646 ttaa------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914450 4 + 189454096 ttaa------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905783 4 - 40319822 ttaa------------ i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459862 4 - 9219162 ttaa------------ i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984951 6 + 135778131 ctagtt---------- i chlSab2.chr7 I 181 C 0 s colAng1.NW_012114544v1 5983296 12 + 8656713 ctag--tttttttt-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410776 4 - 190850796 ttaa------------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496285 4 - 25294431 ctaa------------ i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050854 4 - 6311556 ctaa------------ i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906743 4 + 15034901 ctaa------------ i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1741219 1 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035079 152 - 53741614 I e otoGar3.GL873702 933817 52 - 3201129 I e manLeu1.NW_012103277v1 2749799 1485 - 3013352 M a score=1070449.000000 s hg38.chr9_KI270719v1_random 34441 132 + 176845 tttttgca-tttttagtagagatggagtttcacca-tgttggccaggctggtctca--ctcctgacctcaagtgatctgcctgcctcggcctcccagagtgctgggattacaggcatgagccaccgcgcccATCCG s panTro5.chr4 135059204 132 + 194502333 tttttgca-tttttagtagagatggagtttcacca-tgttggccaggctggtctca--ctcctgacctcaagtgatctgcctgcctcgtcctcccagagtgctgggattacaggcatgagccaccgcgcccACTCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39761 132 - 70559 tttttgca-tttttagtagagatggagtttcacca-tgttggccaggctggtctca--ctcctgacctcaagtgatctgcctgcctcggcctcccagagtgctgggattacaggcatgagccaccgcgcccacccG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453314 132 - 115148730 tttttgca-tttttagtagagatggagcttcacca-tgttggccaggctggtctca--ctcctgacctcaagtgatctgcctgcctcggcctcccagagtgctgggattacaggcaggagccatcgcgcccacccG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395446 132 + 190429646 tttttgca-tttttagtagagatggagtttcacca-tgttggccaggttggtctca--ctcctgacctcaagtgatctgcctgtctccgcctcccagagtgctgggattacaggcatgagccaccgcgcccacccT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914454 132 + 189454096 tttttgca-tttttagtagagatggagtttcacca-tgttggccaggttggtctca--ctcttgacctcaagtgatctgcctgtctccgcctcccagagtgctgggattacaggcatgagccaccgcgcccacccT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905787 132 - 40319822 tttttgca-tttttagtagagatggagtttcacca-tgttggccaggttggtctca--ctcctgacctcaagtgatctgcctgtctccgcctcccagagtgctgggattacaggcatgagccaccgtgcccacccT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459866 132 - 9219162 tttttgca-tttttagtagagattgagtttcacca-tgttggccaggttggtctca--ctcctgacctcaagtgatctgcctgtctccgcctcccagagtgctgggattacaggcatgagccaccgcgcccacccT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78984957 125 + 135778131 -ttttgtattttttagtggaaacggggtttcacca-tgttggccaggctggtctca--cccctgacttcaagtgatcca-----ctctg--tcccagagtgctgggattacaggcatgagccaccgcgcccacccT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2751294 132 - 3013352 tttttgca-tttttagtagagatggagtttcacca-tgttggccaggttggtctca--ctcctgacctcaagtgatctgcctgtctccgcctcccagagtgctgggattacaggcatgagccaccgcgtccacccT i manLeu1.NW_012103277v1 M 1485 C 0 s colAng1.NW_012114544v1 5983308 133 + 8656713 tttttgtattttttagtagagacggggtttcacag-tgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgtctcggcctcccagagtgctgggattacaggcatgagccaccgcgcccacccT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410780 133 - 190850796 tttttgta-tttttagtagagatggagtttcaccattgttggccaagttggtctca--ctcctgacctcaagtgatcctaccacctcagcctcctagagtgctgggattacaggcgtgagccactgtgcctggccT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496289 133 - 25294431 tttttgta-tttttagtagagacggagtttcaccactgttggccaagctggtctca--ctcctgacctcaagtgatcctaccacctcagtctcctagagtgctgggattacaggcatgagccactgtgcccggccT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050858 133 - 6311556 tttttgta-attttggtagagatggagtttcatgattgttggccaagttggtctca--ctcctgacctcaagtgaccctaccacctcagccttctagagtgctgggattacaggcatgatccactgtgcccagccT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906747 133 + 15034901 tttttgta-tttttagtagagatggagtttcaccattgttggccaagttggtctca--ctcctgacctcaagtgatcctaccacctcagcctcctagagtgctgggattacaggcatgagccactgtgccgggccT i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1741219 1 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035079 152 - 53741614 I e otoGar3.GL873702 933817 52 - 3201129 I a score=178758.000000 s hg38.chr9_KI270719v1_random 34573 21 + 176845 GGTTATAAATTTG-TTATTCCT s panTro5.chr4 135059336 21 + 194502333 GGTTATAAATTTC-TTATTCCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39893 21 - 70559 GGTTATAAATTTG-TTATTCCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453446 21 - 115148730 GGTTATAAATTTC-TTATTCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395578 21 + 190429646 GGTTATAAATTTT-TTATTCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914586 21 + 189454096 GGTTATAAATTTT-TTATTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905919 21 - 40319822 GGTTATAAATTTT-TTATTCCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4459998 21 - 9219162 GGTTATAAATTTT-TTATTCCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985082 21 + 135778131 GGTTATAACTTTT-TTATTCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2751426 21 - 3013352 GGTTATAAATTTT-TTATTCCT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5983441 21 + 8656713 GGTTATACATTTC-TTATTCCt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410913 21 - 190850796 GGTTATAAATTTC-TTATTCCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496422 22 - 25294431 GGTTATAAATTACTTTATTCCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4050991 21 - 6311556 GATTATAAATTTG-GGAtgtgt i cebCap1.NW_016107420v1 C 0 I 35 s aotNan1.NW_018507635v1 14906880 21 + 15034901 GGTTATAAATTTC-TTATTCCT i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1741220 21 + 5974691 GATTAAACATTTC-TTATTCCC i dasNov3.JH569232 I 1 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035079 152 - 53741614 I e otoGar3.GL873702 933817 52 - 3201129 I a score=38677.000000 s hg38.chr9_KI270719v1_random 34594 5 + 176845 CTTGT s panTro5.chr4 135059357 5 + 194502333 CTtgt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39914 5 - 70559 CTTGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453467 5 - 115148730 CTtgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395599 5 + 190429646 CTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914607 5 + 189454096 CTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34905940 5 - 40319822 CTTGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460019 5 - 9219162 CTtgt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985103 5 + 135778131 CTtgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2751447 5 - 3013352 CTTGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5983462 5 + 8656713 gttgt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129410934 5 - 190850796 CTAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496444 5 - 25294431 TTTGT i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14906901 5 + 15034901 CTtgt i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1741241 5 + 5974691 CTTCT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035079 152 - 53741614 I e otoGar3.GL873702 933817 52 - 3201129 I e cebCap1.NW_016107420v1 4051012 35 - 6311556 I a score=103269.000000 s hg38.chr9_KI270719v1_random 34599 20 + 176845 GGTTGTTTGGGA----------------TGTGTATT-- s panTro5.chr4 135059362 20 + 194502333 ggttgtttggga----------------tgtgtatt-- i panTro5.chr4 C 0 I 2 s gorGor5.CYUI01001450v1 39919 20 - 70559 GGTTGTTTGGGA----------------TGTGTATT-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453472 20 - 115148730 ggttgtttggga----------------tgtgtatt-- i nomLeu3.chr7b C 0 I 2 s rheMac8.chr5 131395604 36 + 190429646 GGTTGTTTGGGAtgtgtatgtgtgtgtgtgtgtgtg-- i rheMac8.chr5 C 0 I 2 s macFas5.chr5 130914612 36 + 189454096 GGTTGTTTGGGAtgtgtatgtctgtgtgtgtgtgtg-- i macFas5.chr5 C 0 I 2 s macNem1.NW_012010911v1 34905945 36 - 40319822 GGTTGTTTGGGAtgtgtatgtgtgtgtgtgtgtgtg-- i macNem1.NW_012010911v1 C 0 I 2 s cerAty1.NW_012000798v1 4460024 26 - 9219162 ggttgtttgggatgtgta----------tgtgtgtg-- i cerAty1.NW_012000798v1 C 0 I 2 s chlSab2.chr7 78985108 22 + 135778131 ggttgtttggga--------------tgtctatgtg-- i chlSab2.chr7 C 0 I 2 s manLeu1.NW_012103277v1 2751452 26 - 3013352 GGTTGTTTGGGAtgtg----------tgtgtgtgtg-- i manLeu1.NW_012103277v1 C 0 I 2 s colAng1.NW_012114544v1 5983467 24 + 8656713 ggttgtttgggatg------------tgtatttgtg-- i colAng1.NW_012114544v1 C 0 I 2 s calJac3.chr3 129410939 20 - 190850796 GGTTGTTTGGGA----------------CGTATACT-- i calJac3.chr3 C 0 I 31 s saiBol1.JH378129 6496449 20 - 25294431 GGTTGTTTGGGA----------------tgtgtatt-- i saiBol1.JH378129 C 0 I 30 s aotNan1.NW_018507635v1 14906906 20 + 15034901 ggttgtttggga----------------tgtgtatt-- i aotNan1.NW_018507635v1 C 0 I 6 s otoGar3.GL873702 933869 20 - 3201129 AGTTGTTTGGGG----------------TGTGTGTT-- i otoGar3.GL873702 I 52 C 0 s dasNov3.JH569232 1741246 17 + 5974691 ----AATTGGG-----------------TGCATTTATA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035079 152 - 53741614 I e cebCap1.NW_016107420v1 4051012 35 - 6311556 I a score=335997.000000 s hg38.chr9_KI270719v1_random 34619 44 + 176845 -----TGTGTG--------TGTGCACATATACATATTATTGAATTTACCACGTTACT s panTro5.chr4 135059384 44 + 194502333 -----tgtgtg--------tgtgCACATATACATATTATTGAATTTACTACATTACT i panTro5.chr4 I 2 C 0 s gorGor5.CYUI01001450v1 39939 44 - 70559 -----TGTGTG--------TGTGCACATATACATATTATTGAATTTACTACGTTACT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453494 44 - 115148730 -----tgtgtg--------tgtgCACATGTACATATTATTGAATTTACTACATTACT i nomLeu3.chr7b I 2 C 0 s rheMac8.chr5 131395642 44 + 190429646 -----tgtgtg--------tgtgCACGTATACATGTTATTGAATTTACTATAATACT i rheMac8.chr5 I 2 C 0 s macFas5.chr5 130914650 44 + 189454096 -----tgtgtg--------tgtgCACGTATACATGTTATTGAATTTACTATAATACT i macFas5.chr5 I 2 C 0 s macNem1.NW_012010911v1 34905983 44 - 40319822 -----tgtgtg--------tgtgCACGTATACATGTTATTGAATTTACTATAATACT i macNem1.NW_012010911v1 I 2 C 0 s cerAty1.NW_012000798v1 4460052 44 - 9219162 -----tgtgtg--------tgtgCATGTATACATGTTATTGAATTTACTATATTACT i cerAty1.NW_012000798v1 I 2 C 0 s chlSab2.chr7 78985132 44 + 135778131 -----tgtgtg--------tgtgcacgtataCAGGTTACTGAATTTACGACGTTTCT i chlSab2.chr7 I 2 C 0 s manLeu1.NW_012103277v1 2751480 44 - 3013352 -----tgtgtg--------tgtgCATGTATACATGTTATTGAATTTACTATATTACT i manLeu1.NW_012103277v1 I 2 C 0 s colAng1.NW_012114544v1 5983493 44 + 8656713 -----tgtgtg--------tgtgCATGTATACATGTTATTGAATTTACTGCATTACT i colAng1.NW_012114544v1 I 2 C 0 s calJac3.chr3 129410990 52 - 190850796 -----tgtgtgtatatatatatatatatatatatataATTGAATTTACTTAATTACT i calJac3.chr3 I 31 C 0 s saiBol1.JH378129 6496499 44 - 25294431 -----tgtgtg--------tgtgCACATACATATGTTATTGAATTTACTTAATTACT i saiBol1.JH378129 I 30 C 0 s cebCap1.NW_016107420v1 4051047 44 - 6311556 -----tgtgtg--------tgtgCACATACATATATTATTGAATTTACTTAATTACT i cebCap1.NW_016107420v1 I 35 C 0 s aotNan1.NW_018507635v1 14906932 44 + 15034901 -----tgtgtg--------tgtgCACATACATATATTATTGAATTTACTTAATTACT i aotNan1.NW_018507635v1 I 6 C 0 s otoGar3.GL873702 933889 9 - 3201129 -----TGTGTG--------TTT----------------------------------- i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1741263 41 + 5974691 TATGATGTGTG--------AATGACTGTATA--------TGAATTTACTACATTCCC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26311873 499 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035079 152 - 53741614 I a score=724352.000000 s hg38.chr9_KI270719v1_random 34663 94 + 176845 CCAAAGGCTTTTCTTTAACTATTTTGCTTGATGTATATTCAA------CAATGATAGTC-----T--------caaa--------caaacaaac----aga-aaacag-aaacacaTCTGATTTTTC---- s panTro5.chr4 135059428 94 + 194502333 CCAAAGGCTTTTCTTTAACTATTTTGCTTGATGTATATTCAA------CAGTGATAGTC-----T--------caaa--------caaacaaac----aaa-aaacag-aaacacaTCTGCTTTTTC---- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 39983 94 - 70559 CCAAAGGCTTTTCTTTAACTATTTTGCTTGATGTATATTCAA------CAATGATAGTC-----T--------caaa--------caaacaaac----aga-aaacag-aaacacaTCTGATTTTTC---- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453538 102 - 115148730 CCAAAGGCT----TTTAACTATTTTGCTTGATGTATATTCAAGcaaacaaacgaaaaacaaacaa--------aaaa--------caaacaaac----aaa-aaaaaacaaacaCATCTGATTTTTC---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395686 99 + 190429646 CCAAAGGCTTTCCTTTAACTATTTTGCTTGATGTGTTTTCAA------TGGTGATAGTC-----T----caaacaaa--------caaacaaac----aaacaaacaG-AAGCACATCTGATTTTTC---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914694 99 + 189454096 CTAAAGGCTTTCCTTTAACTATTTTGCTTGATGTGTTTTCAA------TGGTGATAGTC-----T----caaacaaa--------caaacaaac----aaacaaacaG-AAGCACATCTGATTTTTC---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906027 103 - 40319822 CCAAAGGCTTTCCTTTAACTATTTTGCTTGATGTGTTTTCAA------TGGTGATAGTC-----T----Caaacaaa--------caaacaaacaaaaaaaaaaaCAG-AAGCACATCTGATTTTTC---- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460096 98 - 9219162 CCAAAGGCTTTCCTTTAACTATTTTGCTTGATGTGTTTTCAA------CGGTGATAGTC-----T----caaacaaa--------caaacaaac----aaa-aaacaG-AAGCACATCTGATTTTTC---- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985176 101 + 135778131 CCAAAGGCTTTTCTTCAACTATTATGCTTGATGTGTATTCAA------CGGCGATAGTC-----Tcaaacaaacaaa--------caaacaaac----aaa-aaacaG-AAGCACATCTGATTTTT----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2751524 98 - 3013352 CCAAAGGCTTTCCTTTAACTATTTTGCTTGATGTGTTTTCAA------CGGTGATAGTC-----T----caaacaaa--------caaacaaac----aaa-aaacaG-AAGCACATCTGATTTTTC---- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5983537 94 + 8656713 CCAAAGGCTTTTCTTTAACTATTTTGCTTGGTGTGTATTCAA------CGGTGATAGTC-----T--------caaa--------caaacaaac----aaa-aaacaG-AAGCACATCTGATTTTTC---- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411042 96 - 190850796 TCAAAGGCTTTTCTTTAACTACTTTGCTT-ATGTACATTTAA------CAGTGATAGTT-----T--------AAAAC-----ATTTAACAAAC----AAA-ATACAG-AAAACCACCTGATTTTTA---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496543 93 - 25294431 CCAAAGGCTTTTCTTTAACTACTTTGCTT-ATGTACATTCAA------CAGTGATAGTT-----T--------AAAA--------TCAACAAAC----AAA-ATACAG-AAAAACACCTGATTTTTC---- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4051091 101 - 6311556 CCAAAGGCTTTTCTTTAACTGCTTTGCTT-ATGTACATTCAA------CAGTGATAGTT-----T--------Aaaacaaacaaacaaacaaac----aaa-atacag-aaaaacaCCTGATTTTTC---- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14906976 96 + 15034901 CCAAAGGCT----TTTAACTACTTTGCTT-ATGTAGATTCAA------CAGTGATTCTT-----T--------AAAACATTTaa-caaacaaac----aaa-atacag-aaaaacaCCTGATTTTTC---- i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26312372 87 - 93316391 CCAAAGGCTTTTCTTTAACTACTTTACTTGTTGTATATTCAA------CAGTGATATTC-----T--------T-----------TTAACAAAC----AGAAGCACAG-A-----ATATAATTTTTT---- i micMur3.chr14 I 499 C 0 s otoGar3.GL873702 933898 76 - 3201129 --------TTTTCTTTAGCGACTTTGATTGTTGTACATTT-G------CGGTGATA--C-----T--------C-----------TTAACAAAC----AGAAGCACAG-A-----GTCAAATTTTTT---- i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1741304 93 + 5974691 CCAAAGGCTTTCCTTTAACTAGTTTGCTTGCTGTATATTCAA------CAGTGATATTC-----T-----------A--------TAAATAAAT----A---GCACAG-AGCCTAATTTTTTTTTTTTTTA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035079 152 - 53741614 I a score=1849373.000000 s hg38.chr9_KI270719v1_random 34757 175 + 176845 ACCAATACTGTTTATAGAATGAATCTGTATAG-AGTCTGAGGCTATTCTGATGATA----AATTGATTATAGGACTAGAAAAAACTATTTTGCCATTTTACAAACTCTCAT-TATG--------------CACCTTATATAATAGTTCCAAGTTAATAAATTTGCTTCTATGT--------TTATAGTCTACAACAGAAAAAA s panTro5.chr4 135059522 175 + 194502333 ACCAATACTGTTTATAGAATGAATCTGTATAGCAGTCTGAGGCTATTCTGATGATA----AATTAATTATAGGACTAGAAAAAACTATTTTGCCATTTTACAAACTCTCAT-TATG--------------CACCTTATATAATAGTGCCAAGTTAATAAATTTGCTTCTATGT--------TTATAGTCTGCAAT-TAAAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 40077 175 - 70559 ACCAATACTGTTTATAGAATGAACCTGTATAG-AGTCTGAGGCTATTCTGATGATA----AATTGATTATAGGACTAGAAAAAACTATTTTGCCATTTTACAAACTCTCAT-TATG--------------CACCTTATATAATAGTGCCAAGTTAATAAATTTGCTTCTATGT--------TTATAGTCTGCAACAGAAAAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453640 175 - 115148730 GCCGATATTGTTTATAGAATGAATCTGTATAG-AGTCTGAGGCTATTCTGATGATA----AATTAATTATAGGACTAGAAAAAACTATTTTGCCATTTTACAAACTCTCAT-TATG--------------CACCTTATATAATAGTGCCAAGTTAATAAATTGGCTTCTATGT--------TTATAGTCTGCAATTGAAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395785 175 + 190429646 ACCAATACTGCTTATAGAATTAATCCGTATAG-AGTCTGAGGCTATTCTGATGATA----AATTGATTACAGGACTAGAAAAAACGATTTTGCCATTTTACAAACTCTCAC-TATG--------------CACCTTATATAATAGTGCCAAGTTAATAAATTTGCTTCTATGT--------TTATAGTCTGAAATTGGAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914793 175 + 189454096 ACCAATACTGCTTATAGAATTAATCCGTATAG-AGTCTGAGGCTATTCTGATGATA----AATTGATTACAGGACTAGAAAAAACGATTTTGCCATTTTACAAACTCTCAC-TATG--------------CACCTTATATAATAGTGCCAAGTTAATAAATTTGCTTCTATGT--------TTATAGTCTGAAATTGGAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906130 175 - 40319822 ACCAATACTGCTTATAGAATTAATCCGTATAG-AGTCTGAGGCTATTCTGATGATA----AATTAATTACAGGACTAGAAAAAACGATTTTGCCATTTTACAAACTCTCAC-TATG--------------CACCTTACATAATAGTGCCAAGTTAATAAATTTGCTTCTATGT--------TTATAGTCTGAAATTGGAAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460194 175 - 9219162 ACCAATACTGCTTATAGAATTAATCCGTATAG-AGTCTGAGGCTATTCTGATGATA----AATTAATTACAGGACTAGAAAAAACGATTTTGCCATTTTACAAACTCTCAC-TATG--------------CACCTTATATAATAGTGCCAAGTTAATAAATTTGCTTCTATGT--------TTATAGTCTGCAATTGGAAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985277 175 + 135778131 ACCAGTACTGCTTATAGAATGAATCCATATAG-AGTCTGAGGCTATTCTGATGATA----AATTAATTACAGGACTAGAAAAAACGATTTTGCCATTTTACAAACTCTCAC-TATG--------------CTCCTTATATAATAGTGCCAAGTTAATAAATTTGCTTCTATGT--------TTATAGTCTGCAATTGAAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2751622 175 - 3013352 ACCAATACTGCTTATAGAATTAATCCGTATAG-AGTCTGAGGCTATTCTGATGATA----AATTAATTACAGGACTAGAAAAAACGATTTTGCCATTTTACAAACTCTCAC-TATG--------------CACCTTATATAATAGTGCCAAGTTAATAAATTTCCTTCTATGT--------TTATAGTCTGCAATTGGAAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5983631 179 + 8656713 ACCAATACTGTTTATAAAATGAATCCGTATAG-AGTCTGAGGCTATTCTGATAATAAATTAATTAATTATAGGACTAGAAAAAACGATTTTGCCATTTTACAAACTCTCAC-TATG--------------CACCTTATATAATAGTGCCAAGTTAATAAATGTGCTTCTATGT--------TTATAGTCTGCAATTGAAAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411138 188 - 190850796 ACCAATACTATTTATAGAGTGAATCTGTATAG-AGCTTGAAGCTATTCTGATAATA----AATTAATTATAGGACTAG-AAAATCTATTTTACCATTTTACAAACTTTCAC-TATTTTAAAAAATTTTGCTTTCTTATATAATACTGCCAAGTTAATAAATTTGCTTCTATGC--------TTATAGTCTGCATTTGAAAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496636 187 - 25294431 A-CAGTACTATCTATAGAATGAATCTGTATAG-ATCTTGAAGCTATTCTGTTGATA----AATTAATTATAAGACTGG-AAAATCTATTTTACCATTTTACAAAATTTCAC-TATTTTACAAAATTTTGCTTTCCTATGTAATACTGCCAAGTTAATAAATTTGCTTCTATGC--------TTATAGTCTGCAATTGAAAAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4051192 188 - 6311556 ACCAATACTATTTATAGAATGAATCTGTATAG-AGCTTGAAGCTATTCTGATGATA----AATTAATTATAGGACTAG-AAAATCTATTTTACCATTTTGCAAACTTTCAC-TATTTTACAAAATTTCGCTTTCTTATATAATACTGCCAAGTTAATAAATTTGCTTCTATGC--------TTATAGTCTGCAATTGAAAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14907072 188 + 15034901 ACCAATACTATTTATAGAATGAATCTGTATAG-AGCTTGAAGCTATTCTGATGATA----AATTAATTATAGGACTAG-AAAATCTATTTTATCATTTTACAAACTTTCAC-TATTTTACAAAATTTCGCTTTCTTGTATAATACTGCCAAGTTAATAAATTTGCTTCTATGC--------TTATAGTCTGCAATTGGAAAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26312459 174 - 93316391 ACTAACATTGTTTATAGAATATATCTGAATAG-GGTCCAAAACTATTCTGAGGATG----AATTAATTATATGACTAG-AAAAACTATCTTGACACTTTACAAGCTCTGGT-TATG--------------CACCTTATATAATAGTGTCAACTTAATAAATTTGCTTTAATGT--------GTATAGTTTGCAATAGAAATAT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 933974 177 - 3201129 ACTAACATCGTTTATAGAAGGTG--TGACTAG-TGTCCAAAATTATT---ATGATG----AATTAATAATACAACTAG-AAAAGCTATCCTGGCTCTTTACCAGCGCTACT-TACG--------------CACTTTATCTTATAGTGCCAACTTAATACATCTTTTTTAACGTGCACGTGGGTAGAGTCTGCAACTGAGATAG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44035231 166 - 53741614 ACTAACTCCGCTTCTGAAATGAATGTGAATAC-AGCCCCAAGCCACTCTGAT-AGG----AAGTAATTATAGGACTAA-----ACTACTTTGACACTTCACAAATTCTGGT-GTGT--------------AACATTATATAATAGTTC--ATTTAATATAGTTTCCTCAATG---------TCATAGTCTGCAACTGAAGTAA i canFam3.chr19 I 152 I 33 s dasNov3.JH569232 1741397 173 + 5974691 ACTAAAACTGTTTATAGAATGGTCCTGGATAGGATCCTAAAACTATTCTGATGATG----AATTAATTACAGGACTAG-AAAAACTATTTTATC--TTTACAAACTCTGATGTATG---------------ACCTTTTACAATAGTGCCTAATTAATAAATTTACTTTAATGT--------GTATAGTCTGCAATTGAAGTAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1870651.000000 s hg38.chr9_KI270719v1_random 34932 184 + 176845 ----CT-TATG----AGGTACTATTTTCCA-----------GATGAAAGTGAAAGTGATGACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ATACCTTT-ATTATGTGAGCATAATCGATTTTATT--GCAGGG--AAGGCCCTTAATTCAGTAAAAAAGACAAGATTGCTTCTTGAATATTAAAACATTTTCATCTTTTCAGTTT s panTro5.chr4 135059697 184 + 194502333 ----CT-TACC----AGGTACTATTTTCCA-----------GATGAAAGTGAAAGTGATGACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ATACTTTT-ATCATGTGAGCATAATCGATTTTATT--GCAGGG--AAGGCCCTTAATTCAGTAAAAAAGACAGGATTGCTTCTTGAATATTAAAACATTTTCATCTTTTCAGTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 40252 184 - 70559 ----CT-TACG----AGGTACTATTTTCCA-----------GATGAAAGTGAAAGTGATGACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ATACCTTT-ATTATGTGAGCATAATCGATTTTATT--GCAGGG--AAGGCCCTTAATTCAGTAAAAAAGACAGGATTGCTTCTTGAATATTAAAACATTTTCATCTTTTCAGTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453815 184 - 115148730 ----CT-TACT----ATGTACTATTTTCCA-----------GATGAAAGTGAAAGTGATTACAGAT----TTTATTTCTTCACTTAAATTATTAAGAC-ATACCTTT-ATTATGTGAGCATAATTGATTTTATT--GCAGGG--AAGGCCCTTAATTCAGTAAAAAAGACAGGATTGCTTCTTGAATATTAAAATATTTTCATCTTTTCAGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131395960 184 + 190429646 ----CT-TACG----AGGTACTATTTTCCA-----------AATGAAAGTGAAAGTGATTACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ACACCTTT-ATTATGTGAGCATAATTTATTTTATT--TCAGGA--AAGTCCCTTAATTCAGTAAAAAAGACAGGATTGCTTCTTGAATATTAAAACGTTTCCATCTTTTCAGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130914968 184 + 189454096 ----CT-TACG----AGGTACTATTTTCCA-----------AATGAAAGTGAAAGTGATTACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ACACCTTT-ATTATGTGAGCATAATTGATTTTATT--TCAGGA--AAGTCCCTTAATTCAGTAAAAAAGACAGGATTGCTTCTTGAATATTAAAACGTTTCCATCTTTTCAGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906305 184 - 40319822 ----CT-TACG----AGGTACTATTTTCCA-----------AATGAAAGTGAAAGTGATTACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ACACCTTT-ATCATGTGAGCATAATTGATTTTATT--TCAGGA--AAGTCCCTTAATTCAGTAAAAAACACAGGATTGCTTCTTGAATATTAAAACGTTTCCATCTTTTCAGTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460369 184 - 9219162 ----CT-TACG----AGGTACTATTTTCCA-----------AATGAAAGTGAAAGTGATTACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ACACCTTT-ATTATGTGAGCATAATTGATTTTATT--TCAGGA--AAGGCCCTTAATTCAGTAAAAAAGACAGGATTGCTTCTTGAATATTAAAACGTTTCCATCTTTTCAGTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985452 184 + 135778131 ----CT-TACG----AGGTACTATTTTCCA-----------AATGAAAGTGAAAGTGATTACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ACACCTTT-ATTATGTGAGCATAATTGATTTTATT--TCAGGA--AAGGCCCTTAATTCAGTAAAAAAGACAGGATTGCTTCTTGAATATTAAAACATTTCCATCTTTTCAGTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2751797 184 - 3013352 ----CT-TACG----AGGTACTATTTTCCA-----------AATGAAAGTGAAAGTGATTACAGAT----TTTATTTCTTGACTTAAATTATTAAGAT-ACACCTTT-ATTATGTGAGCATAATTGATTTTATT--TCAGGA--AAGGCCCTTAATTCAGTAAACAAGACAGGATTGCTTCTTGAATATTAAAACGTTTCCATCTTTTCAGTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5983810 184 + 8656713 ----CT-TCTG----AGGTACTATTTTCCA-----------AATGAAAGTGAAAGTGATTACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ATACCTTT-ATTATGTGAGCATAATTGATTTTATT--TCAGGA--AAGCTCCTTCATTCAGTAAAAAAGACAGGATTGCTTCTTGAATATTAAAACATTTTCATCTTTTCAGTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411326 176 - 190850796 ----CT------------TACTGTTTCCCA-----------AATGAAAATGAAATTGATTACAGAT----CTTATTTCTTCACTTAAATTGTTAAGAT-ACACCTTT-ATTATGTGAGCATATTTAACTTTATT--GCAGTG--AGGGCCCTTAA-TCAGTAGAAAGGACAGGATTGCTTCTTGAATATTAAAAGATTTTCAACTTTTCAGTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6496823 184 - 25294431 ----ACTTATG----AGGTACAGTTATTCA-----------AATGAAACTGAAATTGATTACAGAT----TTTATTTCTTCACTTAAATTATTAAGAT-ACACCTTT-ATTATGTGAGCATAATTGACTTAATT--TCAGTG--AAGGTCCATAA-TCAGTAGAAAGGACAGGACTGCTTCTTGAATATTAAAAGATTTTCAACTTTTCAGTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4051380 183 - 6311556 ----CT-TACG----AGGTACTGTTTTCCA-----------AATGAAACTGAAATTGATTACAGAT----TTTATTTCCTCACTTAAATTATTAAGAT-ACACCTTT-ATTATGTGAGCATAATTAACTTTATT--GCAGTG--AAGGCCCTTAA-TCAGTAGAAAGGACAGGATTGCTTCTTGAATATTAAAAGATTTTCAGCTTTTCAGTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14907260 183 + 15034901 ----CT-TACG----AGGTACTGTTTTCCA-----------AATGAAAGTGAAATTGATTACAGAT----TTTATTTCTTCACTTAAATTATTAAGCT-ACACCTTT-ATTATGTGAGCATAATTGACTTTATT--GCAGTG--AAGGCCCTTAA-TCAGTAGAAAGGGCAGGATTGCTTCTTGAGTATTAAAAGATTTTCAAGTTTTCAGTTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26312633 195 - 93316391 ----TT-TATGCACTGTATGATATCTTTTA-----------AATAAAAATGAGAGTGATGACATATTTTGTTTATTTCTTCACTTAAATTATTGAGAT-ATGTTTTTCATTATGTGAGCATAACTGATTTTATT--GAAGAGTGAAGACCCTTAATTCAATAAAAAAGAAAAGATTGCCTGCTGAATATTAAAACATTATAATCTTTTCAGTTT i micMur3.chr14 C 0 I 27 s otoGar3.GL873702 934151 183 - 3201129 ----TT-TATTCACCATTTTATGTCTTTCA-----------AATAAAAA------TGATTACATGC----TTTATTTCTTCACTTACGTTATTGAGATAATATCTTTTATT-TGTCAGCATCATTCATTCTATT--GCAGAGCAAAGA-CCTTAATTCAGTAAAAAGGAAAAGATTTTCT-TTGAATATTAAAACATTATGATATTTTTAATTT i otoGar3.GL873702 C 0 I 1 s dasNov3.JH569232 1741570 201 + 5974691 TTTATT-CACT----AGGTA--ATTTTCTAATGAAATTAATACTGAAAATGACAGTAATTGCATATTT--TTTATTTCTACACTTAAATTATAGAGAT-ATACCTTT-ATTATGTGAATGTAATTAATTTTCATAAACAATG--GAAATTCTTATTTCAGTATAAAGGACAAGTCTGACTATTGAATGCTAAAATATAAGGATATTTTAAATTT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=192547.000000 s hg38.chr9_KI270719v1_random 35116 15 + 176845 TGCTTTTCTTGAT------------TA s panTro5.chr4 135059881 22 + 194502333 TGCTTTTCTTGATAC-----TAATCTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 40436 19 - 70559 TGCTTTTCTTGAT--------TATCTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90453999 27 - 115148730 TGCTTTTCTTGATACTAGCATTATCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131396144 27 + 190429646 TGCTTTTCTTGATACTAGCATTATCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130915152 27 + 189454096 TGCTTTTCTTGATACTAGCATTATCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906489 27 - 40319822 TGCTTTTCTTGATACTAGCATTATCTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460553 27 - 9219162 TGCTTTTCTTGATACTAGCATTATCTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985636 27 + 135778131 TGCTTTTCTTGATACTAGCATTATCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2751981 27 - 3013352 TGCTTTTCTTGATACTAGCATTATCTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5983994 27 + 8656713 TGCTTTTCTTGATACTAGCATTATCTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411502 25 - 190850796 TGCTTTTCTTGATACTGGCATTATC-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6497007 27 - 25294431 TGCTTTTCTTGATACTGGCATTGTCTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4051563 27 - 6311556 TCCTTTTCTTGATACTGGCATTATCTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14907443 27 + 15034901 TGCTTTTCTTGATACTGGCATTATCTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 934335 20 - 3201129 TCTTTTTCGGGGTATTAACA------- i otoGar3.GL873702 I 1 C 0 s dasNov3.JH569232 1741771 25 + 5974691 --GTTTTCCTGATTCTAGAGTGATCTA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26312828 27 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=289200.000000 s hg38.chr9_KI270719v1_random 35131 29 + 176845 -T--TTTTCTTTTTACTGAGTAATGTATATCA s panTro5.chr4 135059903 29 + 194502333 -T--TTTTCTTTTTACTGAGTAATGTATATCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 40455 29 - 70559 -T--TTTTCTTTTTACTGAGTAATGTATATCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90454026 29 - 115148730 -T--TTTTCTTTTTACTGAGTAATGTATATCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131396171 29 + 190429646 -T--TTTTCTTTTTACTGAGTAATGTGTATCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130915179 29 + 189454096 -T--TTTTCTTTTTACTGAGTAATGTGTATCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906516 29 - 40319822 -T--TTTTCTTTTTACTGAGTAATGTGTATCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460580 29 - 9219162 -T--TTTTCTTTTTACTGAGTAATATGTATCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985663 29 + 135778131 -T--TTTTCTTTTTACTGACTAATGTGTATCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2752008 29 - 3013352 -T--TTTTCTTTTTACTGAGTAATGTGTATCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5984021 29 + 8656713 -T--TTTTCTTTTTACTGAGTAATGTGTATCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411527 28 - 190850796 ----TTTTTTTTAAAGACAGTAATGTATATCa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6497034 30 - 25294431 -TT-TTTTTTTTTAACTGAGTAATGTATATCa i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4051590 31 - 6311556 -TTCTTTTTTTTTAACCGAGTAATGTATATCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14907470 29 + 15034901 -T--TTTTTTTTAAACTGAGTAATGTATATCA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26312855 29 - 93316391 -T--TTTTCTTTTTACTGAGTAATGTATGTCA i micMur3.chr14 I 27 I 582 s otoGar3.GL873702 934355 29 - 3201129 -T--TATTTTTTTAACTGATTAATGCATGGCA i otoGar3.GL873702 C 0 I 3 s dasNov3.JH569232 1741796 29 + 5974691 TT--TTTCTTTTTTTGAGAGTAA-GTATATGA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=1535054.000000 s hg38.chr9_KI270719v1_random 35160 191 + 176845 ---TTTTTT----A----ATTAAATATAATTTAAATAATATTTTACAATAATCTAAAATGCTTCTGAATACTTCGTCAATAACTTTTGGATGTTCAATAACATTAAGAACGATTACATTTTTCAAATATTATTTTTGCATTATTTATATGTTTGCATTTTTACAAGTGTTCTAATCGCATATTGCAAGGCC----AAATCAGAATT s panTro5.chr4 135059932 191 + 194502333 ---TTTTTT----A----ATTAAATATAATTTAAATAATATTTTACAATATTCTAAAATGCTTCTGAATACTTCGTCAATAACTTTTGGAAGTTCAATAACATTAATAACGATTACATTTTTCAAATATTATTTTTGCATTATTTATATGTTTGCATTTTTACAAGTGTTCTAATCGCATATTGCAAGGCC----AAATCAGAATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 40484 191 - 70559 ---TTTTTT----A----ATTAAATATAATTTAAATAATATTTTACAATAATCTAAAATGCTTCTGAATACTTCGTCAATAACTTTTGGATGTTCAATAACATTAAGAACGATTACATTTTTCAAATATTATTTTTGCATTATTTATATGTTTGCATTTTTACAAGTGTTCTAATCGCATATTGCAAGGCC----AAATCAGAATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90454055 191 - 115148730 ---TTTTTT----G----ATTAAATATAATTTAAATAATATTTTACAATAATCTAAAATGCTTCTGAATACTTCGTCAATAACTTTTGGAAATTCAATAACTTTAATAACGATTACATTTTTCAAATATTATTTTTGCATTATTTATATGTTTGCATGTTTACAGGTGTTCTAATCGCATATTGCAAGGCC----AAATCAGAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131396200 187 + 190429646 ---TTTTTt----a----attaaatataatttaaataatattttacaataATCTAAAATGTTTCCAAATACTT----AATAACTTTTGAAAGTTCAATAACTTTAAGAACGATTACATTTTTCAAATATTATTTTTGCATTATTTATATGTTTGCATGTTTACTTGTGTCCTAATCGCACATTGCAAGGCC----AAATCAGAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130915208 187 + 189454096 ---TTTTTt----a----attaaatataatttaaataatattttacaataATCTAAAATGCTTCCAAATACTT----AATAACTTTTGAAAGTTCAATAACTTTAAGAACGATTACATTTTTCAAATATTATTTTTGCATTATTTATATGTTTGCATGTTTACTTGTGTCCTAATCGCACATTGCAAGGCC----AAATCAGAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906545 187 - 40319822 ---TTTTTT----A----ATTAAATATAATTTAAATAATATTTTACAATAATCTAAAATGTTTCCAAATACTT----AATAACTTTTGAAAGTTCAATAACTTTAAGAACGATTACATTTTTCAAATATTATTTTTGCATTATTTATATGTTTGCATGTTTACTTGTGTCCTAATCGCACATTGCAAGGCC----AAATCAGAATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460609 188 - 9219162 ---TTTTTT----A----ATTAAATATAATTTAAATAATATTTTACAATAATCTAAAATGTTTCCAAATACTTAATCAATAACTTTTGAAAGTTCAATAACTTTAAGAACGATTACATTTTTCAAA---TATTTTTGCATTATTTATATGTTTGCATGTTTACTTGTGTCCTAATCGCACATTGCAAGGCC----AAATCAGAATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985692 187 + 135778131 ---TTTTTA----A----ATTAAATATAATTTAAATAATATTTTACAATAATCTAAAATGTTTCCAAACACTT----AATAACTTCTGAAAGTTCAATAACTTTAAGAACGATTACATTTTTCAAATATTATTTTTGCATTATTTATATGTTTGCATTTTTACTTGTGTTCTAATCGCACATTGCAAGACC----AAATCAGAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2752037 191 - 3013352 ---TTTTTT----A----ATTAAATATAATTTAAATAATATTTTACAATAATCTAAAATGTTTCCAAATACTTAATCAATAACTTTTGAAAGTTCAATAACTTTAAGAACGATTACATTTTTCAAATATTATTTTTGCATTATTTATATGTTTGCATGTTTACTTGTGTCCTAACCGCACATTGCAAGGCC----AAATCAGAATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5984050 153 + 8656713 ---TTTTTT----A----TTTAAATATAAATTAAATAATATTTTACAATAATCTAAAATGTTTCCAAACACTTAATCAATAATTTTTGAAAGTTCAATAACTTTAAGAACGATTACATTTTTCAAATATTATTTTTGAATTATTTATATATTTGCGTTTTTAC------------------------------------------T i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411555 189 - 190850796 ---ttttt-----a----attaaatgtaatttaaataatattttaCAATAATCTAAAATGCATCTGAATATTTCATCAATAACTTTTGAAAGTTCAATAACTT-AAAAACAATTGTATTTTTCAAATATTATTTTTGCATTCTTTATATGTTTGCATTTTTCCTTGTGTTCTAATCACATATTGCAAAACT----ATATCAAAATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6497064 181 - 25294431 ---ttttt-----a----attaaatgtaatttaaataatatttt---GTAATCTAAAATGCTTCTGAATACTTCATCAATAACTTTTGAAAGTTTAATAACTT------TAATTATGTTTTTCAAATATTATTTTTGCATTCTTTATATGTTTGCGTTTTTACTTGTGTTCTAATCACATATTGCAAGGCT----ATATCAGaaat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4051621 187 - 6311556 ---TTTTT-----A----ATTAAATGTAATTTAAATAATATTTTACAATAATCTAAAATGCTTCTGAATACT---TCAATAACTTGTGAAAGTTCAATAACTTTAAGAACAATTATATTTTTCAAATATTATTTTTGCATTCTTTATATGTCTGCATTTTTACTTGTGTTCTAATCACATATTGCAAGGCT----ATATCAGAATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14907499 190 + 15034901 ---TTTTT-----A----ATTAAATGTAATTTAAATAATATTTTACAGTAATCTAAAATGCTTCTGAATACTTCATCAATAACTTTTGAAAGTTCAATAACTTTAAGAACAATTATATTTTTCAAATATTATTTTTGCATTCTTTATAGGTTTGCATTTCTACTTGTGTTCTAATCATATATTGCAAGGCT----ATATCAGAATT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 934387 197 - 3201129 ---TATTTTCAAAA----ATTTAACCTAAGTTAAACAATGTCTTATAACAAGTCGAAATGTTTCTAAATATTTCATTAGTATCTTTTGAAACATACATATTTTAAAAAATGCTTTTATTTTTCAAATATTCTTTTTGCATT-TGTATACATTTGCAT-TTTACTTGTGTTCTAGTTACTTATTACAAAGCTATtgataccggaatt i otoGar3.GL873702 I 3 I 952 s dasNov3.JH569232 1741825 71 + 5974691 CTTTACTTT----AGaatatttaatttaatttaaataatatcttatgataatctgaaa------------------------------------------------------------tttttaaatattatttC----------------------------------------------------------------------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26312884 582 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=825532.000000 s hg38.chr9_KI270719v1_random 35351 92 + 176845 TTTAAAGACTTCATTTTATTAACATTTAATTATAGCAATAATTAAGaaataaaataaaatgacataaaattttaaatcatatgaat---aaatta s panTro5.chr4 135060123 92 + 194502333 TTTAAAGACTTTATTTTATTAACATTTAATTATAGCAAAAATTAAGaaataaaataaaatgacataaaattttaaatcatatgaat---aaatta i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 40675 92 - 70559 TTTAAAGACTTTATTTTATTAACATTTAATTATAGCAACAATTAAGAAATAAAATAAAATGACATAAAATTTTAAATCATATGAAT---AAATTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90454246 90 - 115148730 TTTAAAGACTTTATTTTGTTAACGTTTAATTATAGCAACAATTAAGAAATAAAATAAAATGAC--AAAATTTTAAATCATATGAAT---AAGTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131396387 95 + 190429646 TTTAAATACTTTATTTTATTAACATTTAATTATAGCAACAATTAAGAAATAAAGTAAAATGACATAACATTTTAAATCATATGAATTAGAAGTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130915395 95 + 189454096 TTTAAATACTTTATTTTATTAACATTTAATTATAGCAACAATTAAGAAATAAAATAAAATGACATAACATTTTAAATCATATGAATTAGAAGTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906732 95 - 40319822 TTTAAATACTTTATTTTATTAACATTTAATTATAGCAACAATTAAGAAATAAAATAAAATGACATAACATTTTAAATCATATGAATTAGAAGTTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460797 95 - 9219162 TTTAAATACTTTATTTTATTAACATTTAATTATAGCAAAAATTAAGAAATAAAATAAAATGACATAACATTTTAAATCATACGAATTAGAAGTTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985879 95 + 135778131 TTTAAAGACTTTATTTTATTAACATTTAATTATAGCAAAAATTAAGAAATAAAATAAAATGATATAACATTTTAAATCATATGAATTAGAAGTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2752228 95 - 3013352 TTTAAATACTTTATTTTATTAACATTTAATTATAGCAACAATTAAGAAATAAAATAAAATGACATAACATTTTAAATCATACGAATTAGAAGTTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5984203 95 + 8656713 TTTAAAGACTTTGTTTTATTAATATTTAATTATAGCAACAATTAAGAAATAAAATAAAATGACATAAAATTTTAAATCATATGAATTAGAAGTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411744 94 - 190850796 TTAAAACACTTTATTTTACTCACAGTTAATTATAGC-ACAATTAAGAAATGAAATAAAATGACATAAAATTTTAAATCACATGAATGAGAAGCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6497245 94 - 25294431 tttaaagattttattttattaatatttaattataGC-ACAATGAAGAAATGAAATAAAATGACATAAAATTTTGAATCATATGAATGAGAAGCTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4051808 92 - 6311556 TTTAAAGATTTTATTTTATTAACATTTAATTATAGC-ACAATTAAGAAATGAAATAAAATGAC--AAAATATTAAATCATATGAATGAGAAGCTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14907689 94 + 15034901 TTTAAAGACTTTATTTTATTAACATTTAATTATAGC-ACAATTAAGAAATGAAATAAAATGACATAAAATTTTAAATCATATGAATGAGAAGTTA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 935536 88 - 3201129 TTTAAAGATCTTATTTCAGTAGCATTTAATTATAGAAACAACAAAGAAAAGGCATGG-------CAAAATTAAAAATCACATACATGAGAATTTG i otoGar3.GL873702 I 952 C 0 s dasNov3.JH569232 1741896 69 + 5974691 -----------------ACTTACATCTAATTATAGTAACAACTAAAA--------GAAATGACATAAAAGTAGAAATCATAT-AATGTGATATTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26312884 582 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=1001726.000000 s hg38.chr9_KI270719v1_random 35443 91 + 176845 aaCCTATATATTTAAATTACTTTACAATTTTAGCATTTTTCATAAATATACAGAAATTTCATTTCGTATCTGTTGTTATAATTATTACAAT s panTro5.chr4 135060215 91 + 194502333 aaCCTATATATTTAAATTACTTTATAATTTTAGCATTTTTCATAAATATACAGAAATTTCATTTTGTGTCTGTTGTTATAATTATTACAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 40767 91 - 70559 AACCTATATATTTAAATTACTTTACAATTTTAGCATTTTTCATAAATATACAGAAATTTCATTTTGTGTCTGTTGTTATAATTATTACAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90454336 91 - 115148730 AACCTATATATTTAAATTACTTTATACTTTTAGCATTTTTCATAAATATACAGAAATTTCATTTTGTGTCTGTTGTTATAATTATTACAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131396482 91 + 190429646 AATCTTTATATTTAAATAGCTTTATAATTTTAGCATTTTTCATGAATATACAGAAATTTCATTTTGTGTCTCTTGTTATAATTATTACAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130915490 91 + 189454096 AATCTTTATATTTAAATAGCTTTATAATTTTAGCATTTTTCATGAATATACAGAAATTTCATTTTGTGTCTCTTGTTATAATTATTACAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906827 91 - 40319822 AATCTTTATATTTAAATAGCTTCATAATTTTAGCATTTTTCATGAATATACAGAAATTTCATTTTGTGTCTCTTGTTATAATTATTACAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460892 91 - 9219162 AATCTTTATATTTAAATAGCTTTACAATTTTAGCATTTTTCATGAATATACAGAAATTTCATTTTGTGTCTCTTGTTATAATTATTACAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78985974 91 + 135778131 AATCTATATATTTAAATTGCTTTATAATTTTAGCATTTTTCATGAATATACAGAAATTTCATTTTGTGTCTCTTGTTATAATTATTATAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2752323 91 - 3013352 AATCTTTATATTTAAATAGCTTTACAATTTTAGCATTTTTCATGAATATACAGAAATTTCATTTTGTGTCTCTTGTTATAATTATTACAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5984298 91 + 8656713 AATCTATATATTTAAATTGCTTTATAATTTTAGCATTTTTCATGAATATACAGAAATTTCATTTTGTGTCTCTTGTTATAATTATTACAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411838 90 - 190850796 AATCTATAGatttaaattattttataattttagtatttttCATGAATATACAGAAATTTCATTTTGTGTTTCTTGttataatta-tacaat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6497339 86 - 25294431 ----TTTATATTTAAATTACTTGATAATTTTAGTA-TTTTCATGAATATACAGAAATTTCATTTTGCGTTTCTTGTTATAATTATTGCAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4051900 91 - 6311556 AATCTATATATTTAAATTACTTTATAATTTTAGTATTTTTCATGAATACACAGAAATTTCATTTTGTGTTTCTTGTTATAATTATTACAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14907783 91 + 15034901 AATCTATATTTTTAAATTACTTTATAATTTTAGTATTTTTCATGAATTTACAGAAATTTCATTTTGTGTTTCTTGTTATAATTATTACAAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26313466 90 - 93316391 AACCTATATATTTAAGTTACTTTATAATTTTAGTATTTTTCATAAATATACAGAAATATTATTTTAGT-CTTTTGTTATAATTATCACAAT i micMur3.chr14 I 582 C 0 s otoGar3.GL873702 935624 90 - 3201129 AACCTATGTCTTTGAATTACTTTATAATTCTATTA-TTTTCAAAAATATACAGAAATATAATTTTGTTCCTTTTGTTTCAATTATCTCAAT i otoGar3.GL873702 C 0 I 571 s dasNov3.JH569232 1741965 88 + 5974691 AATCCACATATTTAAATTACTTAA-AATCATACTGTTTCT--TGAATATACAGAATTTTCATTTTGTACATCTTGTTACAATTATCACAAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=64648.000000 s hg38.chr9_KI270719v1_random 35534 8 + 176845 ATT-AAAAT s panTro5.chr4 135060306 8 + 194502333 ATT-AAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 40858 8 - 70559 ATT-AAAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90454427 8 - 115148730 ATT-AAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131396573 9 + 190429646 ATTAAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130915581 9 + 189454096 ATTAAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906918 9 - 40319822 ATTAAAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460983 9 - 9219162 ATTAAAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78986065 9 + 135778131 ATTAAAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2752414 9 - 3013352 ATTAAAAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5984389 9 + 8656713 ATTAAAAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411928 9 - 190850796 attaaaaat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6497425 9 - 25294431 ATCaaaaat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4051991 9 - 6311556 ATCAAAAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14907874 9 + 15034901 ATCAAAAAC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26313556 8 - 93316391 -TTAAAATT i micMur3.chr14 C 0 C 0 s dasNov3.JH569232 1742053 7 + 5974691 --TTAAAAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 935714 571 - 3201129 I a score=1824241.000000 s hg38.chr9_KI270719v1_random 35542 206 + 176845 --TATGTAATGG-AAAAATACATTAAGCATCAATTAAGACAGCATACATCTGTTGGCAAA------------AGAAAGAGAAGGTATATTTGATTTCCTTGA-TTTTTTCCTCTCAAAAT-----TGAGAA-AT--AGTTTAA-TTTTATAAATCTATATC---------------CATTTAAATTACTTAAGTCACC--ATTTTAGCC--TAATTTTTTCATTTTCTAGATAGATTACTCT---TCTTTTTT s panTro5.chr4 135060314 209 + 194502333 --TATGTAATGG-AAAAATAAATTAAGCATCAATTAAGACAGCATACATCTGTTGACAAA------------AGAAAGAGAAGGTATATTTGATTTCCTTGATTTTTTTCCTCTCAAAAT-----TGAGAA-ATACAGTTTAA-TTTTATAAATCTATATC---------------CATTTAAATTACTTAAGTCACC--ATTTTAGCC--TAATTTTTTCATTTTCTAAATAGATTCTTCT---TTTTTTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 40866 206 - 70559 --TATGTAATGG-AAAAATAAATTAAGCATCAATTAAGACAGCATACATCTGTTGACAAA------------AGAAAGAGAAGGTATATTTGATTTCCTTGA-TTTTTTCCTCTCAAAAT-----TGAGAA-AT--AGTTTAA-TTTTATAAATCTATATC---------------CATTTAAATTACTTAAGTCACC--ATTTTAGCC--TAATTTTTTCATTTTCTAGATAGATTACTCT---TCTTTTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90454435 208 - 115148730 --TATGTAATGG-AAAAATAAATTAAGCATCAATTAAGACAGCATACATCTGTTGACAAA------------ATAAAGAGAAGGTATATTTGATTTCCTTGA-TTTTTTCCTCTCAAAAT-----TGAGAA-ATACAGTTTAA-TTTTATAAATCTATATT---------------CATTTAAATTACTTAAGTCACC--ATTTTAGCC--TAATTTTTTCATTTTCTAAATAGATTACTCT---TCTCTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131396582 223 + 190429646 --TATTTAATGG-AAAAATAAATTAAGCATCAATTAAGTCAGCATACATCTCTTGGCAAA------------AGAAAGAGATGGTATATTTGATTTCCTTGA-TTTTTTTCTCTGAAAAT-----TGAGAA-ATACAGTTTGA-TTTTTTAAATCAATAGCCATTTAAATTATAGCCATTTAAATTACTTAAGTCACC--ATTTTAGCA--TAAATTTTTCATTTTCTAAATAAATTACTCT---TCTTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130915590 222 + 189454096 --TATTTAATGG-AAAAATAAATTAAGCATCAATTAAGTCAGCATACATCTCTTGGCAAA------------AGAAAGAGATGGTATATTTGATTTCCTTGA--TTTTTTCTCTGAAAAT-----TGAGAA-ATACAGTTTGA-TTTTTTAAATCAATAGCCATTTAAATTATAGCCATTTAAATTACTTAAGTCACC--ATTTTAGCA--TAAATTTTTCATTTTCTAAATAAATTACTCT---TCTTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34906927 223 - 40319822 --TATTTAATGG-AAAAATAAATTAAACATCAATTAAGTCAGCATACATCTCTTGGCAAA------------AGAAAGAGATAGTATATTTGATTTCCTTGA-TTTTTTTCTCTGAAAAT-----TGAGAA-ATACAGTTTGA-TTTTTTAAATCAATAGCCATTTAAATTATAGCCATTTAAATTACTTAAGTCACC--ATTTTAGCA--TAAATTTTTCATTTTCTAAATAAATTACTCT---TCTTTTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4460992 222 - 9219162 --TATTTAATGG-AAAAATAAATTAAGCATCAATTAAGTCAGCATACATCTCTTGGCAAA------------AGAAAGAGATGGTATATTTGATTTCCTTGA--TTTTTTCTCTGAAAAT-----TGAGAA-ATACAGTTTGA-TTTTATAAATCAATAGCCATTTAAATTATAGTCATTTAAATTACTTAAGTCACC--ATTTTAGCA--TAAATTTTTCATTTTCTAAATAAATTACTCT---TCTTTTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78986074 223 + 135778131 --TATTTAATGGAAAAAATAAATTAAGCCTCAATTAAGTCAGCATACATCTCTTGACAAA------------AGAAAGAGATGGTATATTTGATTTCTTTGA--TTTTTTCTCTGAAAAT-----TGAGAA-ATACAGTTTGA-TTTTATAAATCAATAGCCATTTAAATTATAGCCATTTAAATTACTTAAGTCACC--ATTTTAGCA--TAAATTTTTCATTTTCTAAATAAATTACTCT---TCTTTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2752423 222 - 3013352 --TATTTAATGG-AAAAATAAATTAAGCATCAATTAAGTCAGCATACATCTCTTGGCAAA------------AGAAAGAGATGGTATATTTGATGTCCTTGA--TTTTTTCTCTGAAAAT-----TGAGAA-ATACAGTTTGA-TTTTATAAATCAATAGCCATTTAAATTATAGCCATTTAAATTACTTAAGTCACC--ATTTTAGCA--TAAATTTTTCATTTTCTAAGTAAATTACTCT---TCTTTTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5984398 203 + 8656713 --TATTTAATGG-AAAAATAAATTAAGTGTCAATTAAGTCAG----CATCTCTTGACAAA------------AGAAAGAGATGATATATTTGATTTCCTCGA--TTTTTTCTCTGAAAAT-----TGAGAA-ATACAGTTTGA-TTTTATAAATCAATAAC---------------CATTTAAATTACTTAAGTCACC--ATTTTAGTG--TAAGTTTTTCATTTTCTAAATAAATTACTCT---TCTTTTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129411937 204 - 190850796 --tatgtatta--aaaaataaattaaGCATCAATTAAGTCAGCATACATCTGTTGACAAA------------AGAAAAAGATGGTATATTTGATTCACTTGA--TTTTTTTTCTCAAAAT-----TGAGA------ATTTACA-TTTTATAAATCTATATC---------------CATTTGAATTACTCAAATCACC--ATTTTAGCC--TAGATTTTTCATTTTCTAAATAGATTTTTCCTCTTTTTTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6497434 200 - 25294431 --tatgtaata--aaaaataaattaaGCATCAATTAAGTCAGCATACATCTGTTGACAAA------------AG--AAAGATGGTATATTTGATTTACTTGA---TTTTTTTCTCAAAAT-----TGAGA------ATTTACA-TTTTATAAATCTATGTC---------------CATTTAAATTACTCAAGTCACC--ATTTTAGCC--TAGATTTTTCATTTTCTAAATAGATTTTTCTTC-TTTTTTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4052000 195 - 6311556 --ATTGTAAT---AAAAATAAATTAAGCATCAATTAAGTCAGCATACATCTGTTGACA------------------AAAGATGGTATATGTGATTTAATTGA--TTTTTTTTCTCAAAAT-----TGAGA------ATTTACA-TTTTATAAATCCATATC---------------CATTTAAATTACTCAAGTCACC--ATTTTAGCC--TAGATTTTTCATTTTCTAAATAGATTTTTCTC--TTTTTTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14907883 202 + 15034901 --TATGTAATA--AAAAATAAATTAAGCATCAGTTAAGTCAGCATACATCTGTTGACAAA------------AGAAAAAGATGGTATATTTGATTTACTTGA---TTTTTTTCTCAAAAT-----TGAGA------ATTTACA-TTTTATAAATCTATA-C---------------CATTTAAATTACTCAAGTCACC--ATTTTAGCC--TAGGCTTTTCATTCTCTAAATAGATTTTTCTTCTTTTTTTTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26313564 223 - 93316391 --TATGTAATGG-AAAAATAATTTATGTATCAATGAAGTCAGCAAACACTTATTGACAAAGAGGC---CAAGGGAAAGAGATGACATATTCGATTGACTTGA--TATTTTTCCTCAAATTTAAACTGAGAA-ATGTAGTTTAAATTTGATAAATCCACATC---------------AATTTAAACAACTTAAATGACC-AATTTTAGCC--TAAATTATTCATTTTATGAATAGACTACTCT---TTTTCTTC i micMur3.chr14 C 0 I 56 s otoGar3.GL873702 936285 215 - 3201129 --tatatactag-aaaaataatttaaGTGTCAGTGAAGTTAGCAAACACTTATTAACAAGGAGAT---CAAGGGAAAGAGAGGATATATTTGATTGACTTAA--TACTTTTCCTCAAATT-----TGAGAA-GTATAGTTTAAGTTTCATAAGT---AATC---------------AGTTTAAATTATTTAAATGACT-TATTTTAGCC--TAAATTATTCATTTTATGTATAGATTGATGT---CTTCTTTC i otoGar3.GL873702 I 571 I 2 s dasNov3.JH569232 1742060 224 + 5974691 TATATGCAATA--AAAAATAAATTTAGCCTCAATGATATCAAC-TATGCCTGTTGGTAAGAAAATAGACCAAGGAGACAGATGATACATTTGATTGACTTCA--TTGTTTTCTTCAAATT-----TGAAAGCAAATGGTTCAA-ATTTTAGAATCTATATA---------------AATTTGAATTTTCTAAGTGACCAAATTTTAACCTTTAAAGAATTCATTTCCTGAATAGATTGCTCT---TTACATTT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=433616.000000 s hg38.chr9_KI270719v1_random 35748 57 + 176845 CTTAA----------AAAAAAGGTATCATTTATTCTGGTTACGAGTAAAAGACAA--TTTTAGATGTGC s panTro5.chr4 135060523 57 + 194502333 TTTTT----------AAAAGAGGTATCATTTATTCTGGTTACAGGTAAAAGACAA--TTTTAGATGTGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 41072 55 - 70559 TTTTT----------AAAA-AGGTATCATTTATTCTGGTTACAGGTAAAAGACAA---TTTAGATGTGC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90454643 67 - 115148730 TTTTTTTTTTTTAAAAAAAGAGGTATCATTTATTCTGGTTATGGGTAAAAGACAA--TTTTAGATGTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131396805 57 + 190429646 TAAAA----------AATAGAGTTATCATTTATTCTGGTTATAGGTAAAAGATAA--TCCTAGATGTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130915812 57 + 189454096 TAAAA----------AATAGAGTTATCATTTATTCTGGTTATAGGTAAAAGATAA--TTCTAGATGTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34907150 57 - 40319822 AAAAA----------AATAGAGTTATCATTTATTCTGGTTATAGGTAAAAGATAA--TTCTAGATGTGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4461214 57 - 9219162 AAAAA----------AATAGAGTTATCATTTATTCTGGTTATAGGTAAAAGATAA--TTCTAGATGTGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78986297 57 + 135778131 AAAAA----------AATAGAGTTATCATTTATTCTGGTTATAGGTAAAATATAA--TTCTAGATGTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2752645 54 - 3013352 AAAAA----------AATAGAGTT---ATTTATTCTGGTTATAGGTAAAAGATAA--TTCTAGATGTGC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5984601 57 + 8656713 AAAAA----------AATAGAGTTATCATTTATTCTGGTTATAGGTAAAAGATAA--TTCTAGATGTGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129412141 57 - 190850796 TTAAA----------GAAAGAGTTATCATGTATTCTGATTATAGGTGAAAGACAA--TTGTAGATGTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6497634 57 - 25294431 TTAAA----------GAAAGAGCTATCATTTATTCTGGTTATAGGTGAAAGAAAA--TTTTAGATGTAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4052195 57 - 6311556 TTAAA----------GAAAGAGTTATCATTTATTCTGGTTATAGGTGAAAGACAA--TTTTAGATGTGC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14908085 57 + 15034901 TTAAA----------GAAAGAGTTATCATTTATTCTGGTTATAGGTGAAAGACAA--TTTTAGATGTGC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 936502 56 - 3201129 --------TTTC---AAAAATGTTCTCATTTACACTGGCAATAGGAAAAAGCTAA--TTTCAGATTTAA i otoGar3.GL873702 I 2 I 2 s dasNov3.JH569232 1742284 59 + 5974691 TTGTA----------AAAAGAATTATTGCCTATTCTGATCCCATGCAGAAAGCAAAATTGCAGGTATGT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26313787 56 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=4011341.000000 s hg38.chr9_KI270719v1_random 35805 387 + 176845 AAATATTTAGATATGTAATCACAATTAGTATTTTTACTTCATGAAATCTTTAGGCGCAAACTTTGCTGTTCTAAACTAAAATT-TGGATTCCAATTCAAAAGCTAAAGACTATCATAGTGTGATTATCCCAAATGAACTC---TTTTACC--------------------------------------------------------------TAACACTTACTGAAATTTCAAGA-TAAGTAGTATTGAGATTCTACAAGTCAGTAAGAGGTCTTCTCTCTGTGAACTTTTAGGTTTTAAGGGCACAAGGAATTTAATGGCTACTGGGCTAAAGAATGTAATA--------ACCACTACtgtgcatatgattttagtcatataggcaaaaagcctaggagttacattgtttggtcagatggcataagtaca-attaattgcaatataaattgtcagattgttt s panTro5.chr4 135060580 387 + 194502333 AAATATTTAGATATATAATCAAAATTAGTATTTTTACTTCATGAAAACTTTAGGAGCAAACTTTGCTGTTCTAAACTAAAATT-TGGATTCCAATTCAAAAGCTAAAGACTATCATAGTGTGATTATCCCAAATGAACTC---TTTTACC--------------------------------------------------------------TAACACTTACTGAAATTTCAAGA-TAAGTAGTATTGAGATTCTACAAGTCAGTAAGAGGTCTTCTCCCTGTGAACTTTTAGGTTTTAAGGGCACAAGGAATTTAATGGCGACTGGGCTAAAGAATGTAATA--------ACCACTATtgtggatatgattttagtcatataggcaaaaagcctaggagttacattgtttggtcagatggcataagtaca-attaattgcaatataaattgtcagattgttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 41127 385 - 70559 AAATATTTAGATATATAATCACAATTAGTATTTTTA-TTCATGAAATCTTTAGGCGCAAACTTTGCTGTTCTAAACTAAAATT-TGGATTCCAATTCAAAAGCTAAAGACTATCATAGTGTGATTATCCCAAATGAACTC---TTTTACC--------------------------------------------------------------TAACACTTACTGAAATTTCAAGA-TAAGTAGTATTGAGATTCTACAAGTCAGTAAGAGGTCTTCTCCCTGTGAACTTTTAGGTTTTAAGGGCACAAGGAATTTAATGGCTACTGGGCTAAAGAATGTAATA--------A-CACTATtgtgcatatgattttagtcatataggcaaaaagcctaggagttacattgtttggtcagatggcataagtaca-attaattgcaatataaattgtcagattgttt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90454710 378 - 115148730 AA--------ATATATAATCACAATTAGTATTTTTACTTCATGAAATCTTTAGGAGCAAACTTTGCTGTTCTAAATT-AAATT-TGGATTCCAATTCAAAAGCTAAAGACTATCATAGTGTGATAATCCCAAATCAACTC---TTTTACC--------------------------------------------------------------TAACACTTACTGAAATTTCAAGA-TAAGTAGTATTGAGATTCTACAAGTCAGTAAGAGGTCTTCTCCCTGTGAACTTTTAGGTTTTAAGGGCACAAGGAATTTAACGGCGACTGGGCTAAAGAATGTAATA--------ACCACTATtgtgcatatgattttagtcatataggcaaaaagcttaggagttacattgtttggtcagatggcataagtaca-attaattgcaatataaattgtcagattgttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131396862 386 + 190429646 AAATATTTATATACATAATCACGATTAGTATTTTTACTTCATGAAATC-TTGGGAGCAAACTTTGCGGTTCTAAACTAAAATT-TGAATTCCAATTCAACAGCTAAAGACTATCATACTGTGATAATCCCAAATGAACTC---TTTCACC--------------------------------------------------------------TAACACTTAGTGAAATTTCAAGA-TAAGTAGTACTGAGATTCTACAAGTCAGTGAGAGGTCTTCTCTCTGTGAACTTTTAGATTTTAAGGGTACAAGGAATTTAATGGCGATTGGACTAAAGAATGTAATA--------ACCACTATTGTGCATATGATTTTAGCCATATAGGCAAAAAGCCTAGGAGTCACGTTGTTTGGTCAGATGGCATAAGTACA-ATTAATTGCAATATAAATTGTCAGATTATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130915869 386 + 189454096 AAATATTTATATACATAATCACGATTAGTATTTTTACTTCATGAAATC-TTGGGAGCAAACTTTGCGGTTCTAAACTAAAATT-TGAATTCCAATTCAACAGCTAAAGACTATCATACTGTGATAATCCCAAATGAACTC---TTTCACC--------------------------------------------------------------TAACACTTAGTGAAATTTCAAGA-TAAGTAGTACTGAGATTCTACAAGTCAGTGAGAGGTCTTCTCTCTGTGAACTTTTAGATTTTAAGGGTACAAGGAATTTAATGGCGATTGGACTAAAGAATGTAATA--------ACCACTATTGTGCATATGATTTTAGCCATATAGGCAAAAAGCCTAGGAGTTACGTTGTTTGGTCAGATGGCATAAGTACA-ATTAATTGCAATATAAATTGTCAGATTATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34907207 386 - 40319822 AAATATTTATATACATAATCACGATTAGTATTTTTACTTCATGAAATC-TTGGGAGCAAACTTTGCGGTTCTAAACTAAAATT-TGAATTCCAATTCAACAGCTAAAGACTATCATACTGTGATAATCCCAAATGAACTC---TTTCACC--------------------------------------------------------------TAACACTTAGTGAAATTTCAAGA-TAAGTAGTACTGAGATTCTACAAGTCAGTGAGAGGTCTTCTCTCTGTGAACTTTTAGATTTTAAGGGTACAAGGAATTTAATGGCGATTGGACTAAAGAATGTAATA--------ACCACTATTGTGCATATGATTTTAGTCATATAGGCAAAAAGcctaggagttacgttgtttggtcagatggcataagtaca-attaattgcaatataaattgtcagattattt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4461271 394 - 9219162 AAATATTTATATACATAATCACGATTAGTATTTTTACTTCATGAAATC-TTGGGAGCAAACTTTGCGGTTCTAAACTAAAATT-TGAATTCCAATTCAACAGCTAAAGACTATCATACTGTGATAATCCCAAATGAACTC---TTTCACC--------------------------------------------------------------TAACGCTTAGTGAAATTTCAAGA-TAAGTAGTACTGAGATTCTACAAGTCAGTGAGAGATCTTCTCTTTGTGAACTTTTAGATATTAAGGGTACAAGGAATTTAATGGCGATTGGACTAAAGAATGTAATAACCACTATACCACTATTGTGCATATGATTTTAGCCATATAGGCAAAAAGcctaggagttacattgtttggtcagatggcataagtaca-attaattgcaatataaattgtcagattattt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78986354 386 + 135778131 AAATATTTATATATATAATCACGATTAGTATTTTTACTTCATGAAATC-TTGGGAGCAAACTTTGCTGTTCTAAACTAAAATT-TGGATTCCAATTCAACAGCTAAAGACTATCATACTGTGATAATCCCAAATGAACTC---TTTCACC--------------------------------------------------------------TAACACTTAGTGAAATTTCAAGA-TAAGTAGTACTGAGATTCTACAAGTCAGTGAGAGGTCTTCTCTCTGTGAACTTTTAGATTTAAAGGGAACAAGGAATTTAATGGCGATTGGACTAAAGAATGTAATA--------ACCACTATTGTGCATATGATTTTAGCCATATAGGCAAAAAGcctaggagttacattgtttggtcagatagcgtaagtaca-attaattgcaatataaattgtcagattcttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2752699 386 - 3013352 AAATATTTATATACATAATCACGATTAGTATTTTTACTTCATGAAATC-TTGGGAGGAAACTTGGCGGTTCTAAACTAAAATT-TGAATTCCAATTCAACAGCTAAAGACTATCATACTGTGATAATCCCAAATGAACTC---TTTCAAC--------------------------------------------------------------TAACACTTAGTGAAATTTCAAGA-TAAGTAGTACTGAGATTCTACAAGTCAGTGAGAGGTCTTCTCTCTGTGAACTTTTAGATTTTAAGGGTACGAGGAATTTAATGGCGATTGGACTAAAGAATGTAATA--------ACCACTATTGTGCATATGATTTTAGCCATATAGGCAAAAAGcctaggagttacgttgtttggtcagatggcataagtaca-attaattgcaatataaattgtcagattattt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5984658 382 + 8656713 AAATATTTATATAT---ATCACGATTAGTATTTTTACTTCATGAAATC-TTGGGAGCAAACTTTGCTGTTCTAAACTAAAATT-CGGATTCTAATTCAACAGCTAAAGACTATCATACTGTGATAATCCCAAATGAACTC---TTTCACC--------------------------------------------------------------TAACACTTAGTGAAATTTCAAGA-TAAGT-GTATTGAGATTCTACAAGTCAGGGAGAGGTCTTCTCTCTGTGAACTTTTAGATTTTAAGGGTACAAGGAATTTAATGGCTATTGGACTAAAGAATGTAATA--------ACCACTATTGTGCATATGATTTTAGCCATATAAGCAAAAAGcctaggagttacattgtttggtcatatggcataagtgca-attaattgcaatataaattgtcagattcttt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129412198 370 - 190850796 AAATATTTAGATATAGAATCACAATTAGTATTTTTACTTTACGAAATC---AGGAGCAAACTTTGCTGTTCTAAACTAAAAT--TTGATTCCAATTGAAAAGCTAAAGACTATCATAGTGCGATAATCTCAAATAAACTC-----TTACC--------------------------------------------------------------TAAATCTTACTGCAATTTCAAGA-TAAATAGTACTGAGATTCTACAAGTCAATAAGAACTCTTCTCCCTGTGAACATTTAGGTTCTAAGGGAACAA-----------GTGACTGGGCTAAAGAATGTAATA--------ACCACTGTTGTGCACAGGATTTTAGTCATACAGGCAAAAAGcttaggaattacattgtttggtcacatggcataagtaca-attaattgcaatataaatcatcagattgttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6497691 367 - 25294431 AAATATTTAGATACAGAATCACAATTAGTATTTTTACTTCAGGAAATC-TTAGGAGCAAACTTTACTGTTCTAAACTAAAATC-TTGATTCCAATTCAAAGGCTAAAGACTATCATAGTGTGATAATCTCAAATGA------------------------------------------------------------------------------------ACTGCAATTTCAAGA-TAAGTAGTATTGAGATTCTACAAGTCAATAAGAACTCTTCTCCCTGTAAATATTTAGGTTCTAAGGGAACAAGGGACTTAATGGTGACTGGGCTAAAGAATGTAATA--------ACCACTGTtgtgcatatgattttagtcatacaggcaaaaagcctaggaattgcattgtttggtcacatgtcctaagtaca-agtaattgcaatataaattgtcagattgttt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4052252 386 - 6311556 AAATATTTAGATATAGAATCACAATTAGTATTTTTACTTCATGAAATC-GTAGGAGCAAACTTTACTGTTCTAAACTAAAATT-TTGATTCCAATTCAAAAGCTAAAGACTATCATAGTGTGATAATCTCAAATGAACTC---TTTTACC--------------------------------------------------------------TAAAACTTACTGCAATTTCAAGA-TAAGTAGTATTGAGATTCTACAAGTCAGTAAGAACTCTTCTCCTTGTAAACATTTAGATTCTAAGGGAACAAGGGATTTAATGGTGACTGGGCTAAAGAATTTAATA--------ACCACTGTTGTGCATATGATTTTAGTCATACAGGCAAAAAGCCTAGGAATTACATTGTTTGGTCACATTGCATAAGTACA-ATTAATTGCAATATAAATTGTCAGATTGTTT i cebCap1.NW_016107420v1 C 0 I 13 s aotNan1.NW_018507635v1 14908142 386 + 15034901 AAATATTTAGATATAGAATCACAATTAGTATTTTTACTTCATGAAATC-TTAGAAGCAAACTTTACTGTTCTAAACTAAAATT-TTGATTCCAATTCAAAAGCTAAAGACTATCATAGTGTGATAATCTCAAATGAACTC---TTTTACC--------------------------------------------------------------TAAAACTTACTGCAATTTCAAGA-TAAATAGTATTGAGATTCTACAAGTCAATAAGAACTCTTCTCCCTGTGAGCATTTAGGTTCTAAGGGAACAAGGGATTTAATGGTGACTGGGCTAAAGAATGTAATA--------CCCACTGTTATGCATGTGATTTTAGTCATACAGGCAAAAAGcctaggaattacattgtttggtcacatggcataagtaca-attaattgcaatataaattgacagattgttt i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26313843 390 - 93316391 AAATATTCAGGCATGTATTCACACTTAGTATTTTTACTAAATGAAATC-TTAGGAGCAAAGTTTACTGTTATAAACTAAAATTCTTGATTCCAAATCAAAAGCTACACACTGCCACAGTGTGATCGTCCCACATGAAATCTTCTTTTTCC--------------------------------------------------------------TTATACTTATTGCAAATTCAGGA-TATATAGTGTTGAAATTCTATAAATCAATAAGAGAGTTTCTCTTTGTAAACATTTAGGTTCCAAGGGAATGAGGAATTTAACAACAGCTGGTCTAAAGAATGTAATA--------GCCACTGTTGTGTGTATGATCTTATCCATATGGGCAGGGAGcctaggatttagatttcttggttagatggtacaggtaca-tttaattgcaatatatattgtcagattgttt i micMur3.chr14 I 56 C 0 s otoGar3.GL873702 936560 451 - 3201129 ACATATTTAGACATATATTCACCTTTAGTGTATTTACTACATTACAAC-TCAGGAACAAAGTTTATTATTCTAAACTAAAATTCTTGATTCCAAATCAGAAGCTAAACATTATCATCATGTGATGGTCCCAAGTGAAATCTcctttttccatatatttacatgtacacacacatgcatatatatacatacacacatatgtgtgtatatgcatatatatttATTGCAATTTCAAGATTAAATAGTGTTGAAATTCTACAAATCAGTAAGAGGGTTTCTCTTTGCAAACATT--GGTTCCAAGGACATGAGGAATTTAACAGCAGCTGGTCTAAACAATGCAATA--------ACTACTGCTGTGTGTATGATTTTATCCACATAGAAAAGGAGCCTAAGATGTAGACTTCTTGGTTATATGGCATAGGTACA-CTTAATTTCAATATAAATTGTCATCTTGTTT i otoGar3.GL873702 I 2 C 0 s dasNov3.JH569232 1742343 366 + 5974691 AAATATTTAAACATGTATTAACATTTGGCTTTTGTATTCCATGAAATC-TCTGGAACAAAGTTTACTGTTCTAAACTGCATTC-TTGATTCCAAATCGAAAGTTAAAATTTGCTATGGTATAAAGGTTCTAAATGAAATC---TTTTGCT--------------------------------------------------------------CAATGCTTTTTGCAATTTCAGGG-TAAATAATGCTACAATTCCTCAAATCAGTGAGAATGTTTCTCTCT-TAAACATTTAAGTTCCAAAGTCACAAAGAGTTTAATGGCAGCAGGACTGAAG--------------------------TTGCATATGATTTTATTCCTATGGGTAAGAAGCCTAAGATTTGCATTACTTGGTCAGAAAACATA--TACATATTAATTACAATGTAAATTGATGGACTATTT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=74028.000000 s hg38.chr9_KI270719v1_random 36192 16 + 176845 cataaagctctacaat s panTro5.chr4 135060967 16 + 194502333 caaaaagctctacaat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 41512 16 - 70559 caaaaagctctacaat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455088 16 - 115148730 caaaaagctctacaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131397248 16 + 190429646 CAAAAAGGTCTATAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130916255 16 + 189454096 CAAAAAGGTCTATAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34907593 16 - 40319822 caaaaaggtctataat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4461665 16 - 9219162 caaaaaggtctataat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78986740 16 + 135778131 caaaaaggtctataat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2753085 16 - 3013352 caaaaaggtcaataat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5985040 15 + 8656713 caaaaa-atctataat i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129412568 14 - 190850796 --taaatggctataat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6498058 14 - 25294431 --taaatggctataat i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14908528 14 + 15034901 --taaatggctataat i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26314233 15 - 93316391 -caaaaagtttgtgat i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 937011 14 - 3201129 -T-GAAAGTTTGTAAT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1742709 8 + 5974691 CTAAGAGC-------- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e cebCap1.NW_016107420v1 4052638 13 - 6311556 I a score=1491950.000000 s hg38.chr9_KI270719v1_random 36208 139 + 176845 aaattattcttcaccagaaatatatgagagAACACTAGAAACAATAAGTCCTATAGTTATCTTTAAATGCTACCAA--TTTGATGGTTTTTCTGGTGA-CATTCCTGTGTTATTTTAATTTGTATTTTCTTTACCACCCATG s panTro5.chr4 135060983 139 + 194502333 aaattattcttcaccagaaacatataagagaacactagacacagtaagtcctatagctatctttaaatgctaccta--tttgatggtttttctggtga-cattcctgtgttattttaatttgtattttctttaccacccatg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 41528 139 - 70559 aaattattcttcaccagaaatatatgagagAACACTAGAAACAATAAGTCCTATAGTTATCTTTAAATGCTACCTA--TTTGATGGTTTTTCTGGTGA-CATTCCTGTGTTATTTTAATTTGTATTTTCTTTACCACCCATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455104 139 - 115148730 aaattattcttcaccagaaatatatgagagaacactagaaacagtaagtcctatagttatctttaaatgctaccta--tttgatggtttttctggtga-cattcctgtgttattttaatttgtattttctttaccactcatg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131397264 139 + 190429646 AAATTAGTCTTCACCAGAAATATGTGAGAGAACACTGGAAACAATAAACCCTATAGTTATCTTTAAAAGTTACCTA--TTTGATGGTTTTTCTGGTGA-CAGTCCcatgttattttaatttgcattttcttttcTACCCATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130916271 139 + 189454096 AAATTAGTCTTCACCAGAAATATGTGAGAGAACACTGGAAACAATAAACCCTATAGTTATCTTTAAATGTTACCTA--TTTGATGGTTTTTCTGGTGA-cattcccatgttattttaatttgcattttcttttcTACCCATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34907609 139 - 40319822 aaattagtcttcaccagaaatatgtgagagaacactagaaacaataaatcctatagttatctttaaatgttaccta--tttgatggtttttctggtga-cattcccatgttattttaatttgcattttcttttctacccatg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4461681 139 - 9219162 aaattagtcttcaccagaaatatgtgagagaacactagaaacaataaatcctatagttatctttaaatgttaccta--tttgatggtttttctggtga-cattcccatgttattttaatttgcattttcttttctacccatg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78986756 139 + 135778131 aaattattcttcaccagaaatatgtgagagaacactagaaacaataaatcctatagttatctttaaatgttaccta--tttgatggtttttctggtga-cattcccatgttagtttaatttgcattttcttttctacccatg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2753101 139 - 3013352 aaattagtcttcaccagaaatatgtgagagaacactagaaacaataaatcctatagttatctttaaatgttaccta--tttgatggtttttctggtga-cattcccatgttattttaatttgcattttcttttctacccatg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5985055 139 + 8656713 aaattattcttcaccagaaatatgtgagagaacactagaagcaataaatcctatagttatctttaaatgttaccta--tttgatggtttttctggtga-cattcccatgttattttaatttgcattttctttactacccatg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129412582 139 - 190850796 aaattattcttcaccagaaatatatgagcgaacactagaaacaataagtcctataattatctttaaatgttgccta--tttgatggtttttctggtga-cactcctgtgttattttaatttgtattttctttaccacccatg i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6498072 139 - 25294431 aaattattcttcaccagaaatacatgagagaacactagaaacaataagtcctgtaattatctttaaatgttgctta--tttgatggtttttctggtga-cattcctgtgttattttaatttgtaatttctttaccacccatg i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4052651 141 - 6311556 AAATTATTCTTCACCAGAAATATATGAGAGAACACTAGAAACAATAAGTCCTATAATTATCTTTAAATGTTGCATATTTTTGATGGTTTTTCTGGTGA-CGTTCCTGTGTTATTTTAATTTGTGTTTTCTTTACCACCCATG i cebCap1.NW_016107420v1 I 13 C 0 s aotNan1.NW_018507635v1 14908542 139 + 15034901 aaattattcttcaccagaaatatatgagagAACACTAGAAACAATAAGTCCTATAATTATCTTTAAATGTTGCCTA--TTTAATGGTTTTTCTGGTGA-CATTCCTGTGTTATTTTAATTTATATTTTCTTTACCACCCATG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26314248 136 - 93316391 tatttattctctaccagcaacatatgaAGGAACAGTAGAAACAATAGGACATACAGTTATCTTTAAATATTGCCTA--TTTGATG--TTTTTTTGTAA-TATTCCT-GGTTCTTTTAATTTATATTTTCTTTACCACCAATA i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 937025 137 - 3201129 AATCTAGTATCCATCAGAAATGCATGAACAAACACTGGAGACAGTAGGTTGTACAGTTATTTTTAAATGTTGCTCA--TTTGATG--TCTTTTGGTGACCATCCCT-TTCTCTTTTAATTCATATCTTCTTTAATGCcagtg i otoGar3.GL873702 C 0 I 3301 s dasNov3.JH569232 1742717 115 + 5974691 AATTTATGCTCCACCAGAAATATATGAGAG--CACCTAAAGCAATAAGTCATATGACTATTTCTA---GTTTTCTC--TTT----------------A-CAGTTCCTTGCTATTTTAATTTACATTTTCTTTACCACCA--- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I a score=2621365.000000 s hg38.chr9_KI270719v1_random 36347 298 + 176845 AATCTTAACAGA------TTTTTTC-TATGAAAGTTCAGCACTTTGATTCATTCTTCTGT----GGACTGAC----TGCCTGTG-------------CCTATCcact--------tccctggctctcttgcttggtgtgtgcatgtggcttagttttagcaaatagaatatT---------------TGCTGTCCCTGAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTA------TCTTACCTGTTTGTCTGACTTGGGTGATGATTCTTAGAGTAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTATAAGCCTCTGAGTGGCTAAATGGTAGTTAT s panTro5.chr4 135061122 288 + 194502333 aatcttaacaga-------tttttc-tatgaaagttcagcactttgattcattcttctgt----g----gac----tgcctgtg-------------cctatccact--------tccctggctctcttgcttggtgtgtgcatgtggcttagttttagcaaatagaatatT---------------TGCTGTCCCTGAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTA------TCTTACCTGTTTGTCTGACTTGGGTGATGAGTCT-----TAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTATAAGCCTCTGAGTTTCTAAATGGTAGTTAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 41667 297 - 70559 AATCTTAACAGA-------TTTTTC-TATGAAAGTTCAGCACTTTGATTCATTCTTCTGT----GGACTGAC----TGCCTGTG-------------CCTATCcact--------tccctggctctcttgcttggtgtgtgcatgtggcttagttttagcaaatagaatatT---------------TGCTGTCCCTGAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTA------TCTTACCTGTTTGTCTGACTTGGGTGATGATTCTTAGAGTAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTATAAGCCTCTGAGTGGCTAAATGGTAGTTAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455243 293 - 115148730 aatcttaacaga-------tttttc-tatgaaagttcagcactttgattcattcttctgt----g----gac----tgcctgtg-------------cctatgcact--------tcccTTGCTCCCTTGCGTGGTGTGTGCATGTGGCTTAGTTTTAGCAAATAGTATGTT---------------TGCTCTCCCTGAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTA------TCTTACCTGTTTGTCTGACTTGGGTGATGATTCTTAGAGTAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTATAAGCCTCTGAGTGGCTAAATGGTAGTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131397403 295 + 190429646 AACATTAACAGA-------TTTTTC-TGTGCAAGTTCAGCACTTTGATTCATTCTTCTGTGGACT----GAC----TGCCTGTG-------------CCTATCCACT--------TCCCCGGCTC-CTTGCTTGGTGTATGCAGGTGGCTTAGTTTTAGCAAATAGAATATT---------------TGCTGTCCCTGAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTC------TCTTACATGTTTGTCTAACTTGGGTGATGATTCTTAGAGTAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTGTAAGCCTCTGAGTGACT-AATGGTAGTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130916410 295 + 189454096 AATATTAACAGA-------TTTTTC-TGTGCAAGTTCAGCACTTTGATTCATTCTTCTGTGGACG----GAC----TGACTGTG-------------CCTATCCACT--------TCCCCGGCTC-CTTGCTTGGTGTATGCAGGTGGCTTAGTTTTAGCAAATAGAATATT---------------TGCTGTCCCTGAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTC------TCTTACATGTTTGTCTAACTTGGGTGATGATTCTTAGAGTAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTGTAAGCCTCTGAGTGACT-AATGGTAGTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34907748 291 - 40319822 aatattaacaga-------tttttc-tgtgcaagttcagcactttgattcattcttctgt----g----gac----tgcctgtg-------------cctatccact--------tcccCGGCTC-CTTGCTTGGTGTATGCAGGTGGCTTAGTTTTAGCAAATAGAATATT---------------TGCTGTCCCTGAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTC------TCTTACATGTTTGTCTAACTTGGGTGATGATTCTTAGAGTAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTGTAAGCCTCTGAGTGACT-AATGGTAGTTAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4461820 291 - 9219162 aatattaacaga-------tttttc-tgtgcaagttcagcactttgattcattcttctgt----g----gac----tgcctgtg-------------cctatccact--------tcccCGGCTC-CTGGCTTGGTGTGTGCATGTGGCTTAGTTTTAGCAAATAGAGTATT---------------TGCTGTCCCTGAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTC------TCTTACATGTTTGTCTAACTTGGGTGATGATTCTTAGAGTAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTGTAAGCCTCTGAGTGACT-AATGGTAGTTAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78986895 291 + 135778131 aatgttaacaga-------tttttc-tgtgcaagttcagcactttgatttattcttctgt----g----gac----tgcttgtg-------------cctatccact--------tcccCGACTC-CTTGCTTGGCGTGTGCATGTGGCTTAGTTTTAGCAAACAGAATATT---------------TGCTGTCCCTGAACCTTAGTCTTAAATCC----------------TTATAAAAGCAC--TTTTTCTTGTTC------TCTTACCTGTTTGTCTAACTTGGGTGATGATTCTTAGGGTAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTGTAAGTCTCTGAGTGACT-AATGGTAGTTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2753240 291 - 3013352 aatattaacaga-------tttttc-tgtgcaagttcagcactttgattcattcttctgt----g----gac----tgcctgtG-------------CCTATCCACT--------TCCCCGGCTC-CTTGCTTGGTGTGTGCATGTGGCTTAGTTTTAGCAAATAGAATATT---------------TGCTGTCCCTGAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTC------TCTTACATGTTTGTCTAACTTGGGTGATGATTCTTAGAGTAATTTTGGTTGCCAAATGTTAAAGTTAGTAGAACT-ACTGTAAGCCTCTGAGTGACT-AATGGTAGTTAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5985194 291 + 8656713 aatgttaataga-------tttttc-tgtgcaagttcagcactttgattcattcttctgt----g----gac----tgcctgtg-------------cctatccact--------tcccTGGCTC-CTTGCTTGGTGTGTGCATGTGGCTTCGTTTTAGGAAATAGAATATT---------------TGCTGTCCCTAAGCCTTAGTCTTAAATCC----------------TTATACAAGCAC--TTTTTCTTGTTC------TCTTGCCTGTTTGTCTAACTTGGGTGATGATTCTTAGAGTAATTTTGGTTGCCAAGTGTTAAAGTTAGTAGAACT-ACTGTAAGCCTCTGACGGACT-AATGGTAGTTAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129412721 302 - 190850796 aatcttaacaga---tttttttttt-aatgcaagttcatcactttgatttatccttctgt----g----gac----tgcctgtG-------------CCTATCCACTtcccttgctcccttgctcccttgcttggtgtgtccatgtggcttaattttagcaaatagtgtatt---------------tattgtccttgagccttagtcttaaatcc----------------ttacgcaagcac-ttttttcttgttc------tcttacctgtct----aatttggttgatgattcttagagtaattttggttgccaaatgctgaagttagtagaact-gctataagcctctgaatgGGTAAAGAGTAATTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6498211 302 - 25294431 aatcttaacagattttttttttttt-aatgcaagttcattaatttgatttatccttctgt----g----gac----tgcctgtg-------------cttatccACT--------TCCATTGctcccttgcttggtgtttccatgtggcttaattttagcaaacagtgtgtt---------------tactgtccttaagccttagtctgaaatcg----------------ttacacaagcactttttttcttactc------tcttacctgtctgtcaaatttggttgatgattcttagagtaattttggttgccaaatgttgaagttagtagaact-gctataaacttctgaatggctAAAGAGTAGTTAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4052792 298 - 6311556 AATCTTAACAGA---TTTTTTTTTT-AATGCAAGTTCATCACTTTGTTTTATCCTTCTGT----G----GAC----TGCCTGTG-------------CCTATCCACT--------TCCATTGctcccttgcttggtgtgtccatgtggcttaattttagcaaatagtatatt---------------tactgtccttgagccttagtcttaaatcc----------------ttacacaagcac-ttttttcttattc------tcttacctgtctgtctaatttggttgatgattcttagagtaattttggttgccaaatgttgaagttggtagaact-gctataagcctctgaatggctAAAGAGTAGTTAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14908681 299 + 15034901 AATCTTAACATA---TTTTTTTTTTAAATGCAATTTCATCACTTTGATTTATCCTTCTGT----G----GAC----TGCCTGTG-------------CCTATCCACT--------TCCACTGCTCCCTTGCCTGGTGTGTCCATGTGGCTTAATTTTAGCAAATAGTATATT---------------TACTGTCCTTGAGCCTTAGTCTTAAATCC----------------TTACACAAGCAC-ATTTTTCTTATTC------TCTTACCTGTCTGTCTAATTTGGTTGATGATTCTTAGAGTAATTTTGGTTGCCAAATGTTGAAGTTAGTAGAACT-GCTATAAGCCTCTGAATGGCTAAAGAGTAGTTAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26314384 297 - 93316391 AATCTGAGCACA-------ATTTTT-TAAGCAAGTCTATCATTTTGATTTGTTCTTCCGT----G----AACTGCTTGCCTGTG-------------CCTATCCACC--------TTCCAGACTTCTTTCCTTGGAGTGTCCATGTGTCCCAGTTTTAGCAAATAGAATATT---------------AATTGTCCCTGGTACTTATCCTATACACC----------------TCATATGATCCC--TTTTTCTTTTTG------CTTTAGCTGTCTGTCTAACTTGGGTGATGAATCCTAGAGTAATTTTGGTTGCCAAATATTGATGTTAGTAGGACA-ACTTTAAGTCCCTGAATTGCTAAGTGGAAGTTAT i micMur3.chr14 C 0 I 204 s dasNov3.JH569232 1742832 324 + 5974691 CATCTTTGCTGC-----ATATGTCC-TCCATAAGGTGATTATTTGGATTTTCTCCTCTGT----G----AGT----TGCCTGTGGTATAGGCTGCTAGTTATGGATC--------TCCCAGGCACTCCTGCTTGAAG-GTCCAGGCTGCTGAGTTTGGGCAAACTTAATATTAATTAAAGTGATGTGCATTGCCCCTGGACCTAATCCATAAAAACAACAAGAAAAAGAAAAACATGCAAGCAC--TTTTCCCTGTTCTGCATTTTTTTTTTTCCTGTCTAAGTAGGG---------CTGGAGT-ATTTAAGGTACCAAATGTTGAAGTTAGTAGAACTAAATTTAAGTACCTGACTAGGC-AC---------- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=256011.000000 s hg38.chr9_KI270719v1_random 36645 31 + 176845 TTCTGTGGCCTGAATACTCTTATGAGATATT s panTro5.chr4 135061410 31 + 194502333 TTCTGTGGCCTGAATACTCTTATGAGATATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 41964 31 - 70559 TTCTGTGGCCTGAATACTCTTATGAGATATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455536 31 - 115148730 TTCTGTGGCCTGAATACTCTTATGAGATATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131397698 31 + 190429646 TTCTCTGACCTGAATACTTTTATCAGATATT i rheMac8.chr5 C 0 I 4 s macFas5.chr5 130916705 31 + 189454096 TTCTCTGACCTGAATACTTTTATCAGATATT i macFas5.chr5 C 0 I 4 s macNem1.NW_012010911v1 34908039 31 - 40319822 TTCTCTGACCTGAATACTTTTATCAGATATT i macNem1.NW_012010911v1 C 0 I 4 s cerAty1.NW_012000798v1 4462111 31 - 9219162 TTCTCTGACCTGAATACTTTTATCAGATATT i cerAty1.NW_012000798v1 C 0 I 4 s chlSab2.chr7 78987186 31 + 135778131 TTCTCTGACCTGAATACTTTTATGAGATATT i chlSab2.chr7 C 0 I 4 s manLeu1.NW_012103277v1 2753531 31 - 3013352 TTCTCTGACCTGAATACTTTTATCAGATATT i manLeu1.NW_012103277v1 C 0 I 332 s colAng1.NW_012114544v1 5985485 31 + 8656713 TTCTCTGACTTGAATACTTTCATGAGATATT i colAng1.NW_012114544v1 C 0 I 4 s calJac3.chr3 129413023 31 - 190850796 TTCTCTGACCTGAATACTCTTATGAGATATT i calJac3.chr3 C 0 I 4 s saiBol1.JH378129 6498513 26 - 25294431 TTCTCTGACGTGAATACTCTT-----ATAGT i saiBol1.JH378129 C 0 I 4 s cebCap1.NW_016107420v1 4053090 31 - 6311556 TTCTCTGACCTGAATACTCTTATGAGATGTT i cebCap1.NW_016107420v1 C 0 I 4 s aotNan1.NW_018507635v1 14908980 31 + 15034901 TTCTCTGACCTGAATACTCTTATGAAATATT i aotNan1.NW_018507635v1 C 0 I 4 s dasNov3.JH569232 1743156 29 + 5974691 TTCTATCATCTGAACATACTT--GAGATGTG i dasNov3.JH569232 C 0 I 20 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=120933.000000 s hg38.chr9_KI270719v1_random 36676 18 + 176845 CAGAGAGATTGAGAGGGA s panTro5.chr4 135061441 18 + 194502333 CAGAGAGAATGAGAGGGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 41995 18 - 70559 CAGAGAGATTGAGAGGGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455567 18 - 115148730 CAGAGAGAATGAGAGGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131397733 18 + 190429646 GAGAGAGACTGAGAAGGG i rheMac8.chr5 I 4 C 0 s macFas5.chr5 130916740 18 + 189454096 GAGAGAGACTGAGAAGGG i macFas5.chr5 I 4 C 0 s macNem1.NW_012010911v1 34908074 18 - 40319822 GAGAGAGACTGAGAAGGG i macNem1.NW_012010911v1 I 4 C 0 s cerAty1.NW_012000798v1 4462146 18 - 9219162 GAGAGAGACCGAGAAGGG i cerAty1.NW_012000798v1 I 4 C 0 s chlSab2.chr7 78987221 18 + 135778131 GAGAGAGACCGAGAAGGG i chlSab2.chr7 I 4 C 0 s colAng1.NW_012114544v1 5985520 18 + 8656713 GAGAGAGACCGAGAGGGG i colAng1.NW_012114544v1 I 4 C 0 s calJac3.chr3 129413058 18 - 190850796 GAGAAAGAAGGAGAGGGG i calJac3.chr3 I 4 C 0 s saiBol1.JH378129 6498543 18 - 25294431 GAGAAAGAAGGAGAGGGG i saiBol1.JH378129 I 4 C 0 s cebCap1.NW_016107420v1 4053125 18 - 6311556 GAGAAAGAAGGAGAGGGG i cebCap1.NW_016107420v1 I 4 C 0 s aotNan1.NW_018507635v1 14909015 18 + 15034901 GAGAAAGAAGGAGAGGGG i aotNan1.NW_018507635v1 I 4 C 0 s dasNov3.JH569232 1743205 18 + 5974691 aagagagaggaagagaga i dasNov3.JH569232 I 20 C 0 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e manLeu1.NW_012103277v1 2753562 332 - 3013352 I a score=939977.000000 s hg38.chr9_KI270719v1_random 36694 104 + 176845 --------------------AGAATTATTTTTGAAGACATGGAATTTTTATTTTCTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCTCTGCTAATTTTTCTT s panTro5.chr4 135061459 104 + 194502333 --------------------AGAATTATTTTTTAAGACATGGAATTTTTATTTTCTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCCCTGCTAATTTTTCTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42013 104 - 70559 --------------------AGAATTATTTTTGAAGACATGGAATTTTTATTTTCTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCTCTGCTAATTTTTCTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455585 104 - 115148730 --------------------AGAATTATTTTTTAAGACATGGAATTTTTATTTTCTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCTCTGCTAATTTTTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131397751 104 + 190429646 --------------------AGAACTATTTTTTAAGACATGGAATTTTTATTTTGTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCTCTGCTACTTTTTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130916758 104 + 189454096 --------------------AGAACTATTTTTTAAGACATGGAATTTTTATTTTGTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCTCTGCTACTTTTTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908092 104 - 40319822 --------------------AGAACTATTTTTTAAGACATGGAATTTTTATTTTGTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCTCTGCTACTTTTTCTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462164 104 - 9219162 --------------------TGAACTATTTTTTAAGACATGGAATTTTTATTTTGTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCTCTGCTACTTTTTCTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987239 103 + 135778131 --------------------AGAACTATTTTTTAAGACATGGAATTTTTATTTTGTATTCCTTAGAACAGTTTAG-TTATCCTAAAGAGTAACTACCTATTATTTTCCTCTGCTACTTTTTATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2753894 104 - 3013352 --------------------AGAACTATTTTTTAAGACATGGAATTTTTATTTTGTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCTCTGCTACTTTTTCTT i manLeu1.NW_012103277v1 I 332 C 0 s colAng1.NW_012114544v1 5985538 104 + 8656713 --------------------AGAACTATTTTTTAAGACATGGAATTTTTATTTTGTATTCCTTAGAACAGTTTAGTTTACCCTAAATAGTAACTACCTATTATTTTCCTCTGCTGCTTTTTCTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129413076 104 - 190850796 --------------------AAAATTGTTTTTTAAGACATGGAATTTTTATTCCGTATTCCTTAGAACAGTTTAGTTTACCCTAAATCGTAACTACCTGTTATTTTCCTCTGCTAATTTTTCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6498561 104 - 25294431 --------------------AGAATTGTTTTTTAAGACATAGAATTTTTACTTTATACTCCTTAGAACTGTTTAGTTTACCCTAAATTGTAACTACTTGTTATTTTCCTCTGCTAATTTTTCTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4053143 104 - 6311556 --------------------AGAATTGCTTTTTAAGACATGGAATTTTTATTCTGTATTCCTTACAACAGTTTAGCTTACCCTAAATCGTATCTACCTGTTATTTTCCTCTGCTAATTTTTCTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14909033 104 + 15034901 --------------------AGAATTGTTTTTTAAGACATGGAATTTTTATTCTGTATTCCTTAGAACAGTTTAGTTTACCCTAAATCATAACTACTTGTTATTTTCCTCTGCTAATCTTTCTT i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1743223 122 + 5974691 agaaaggaagaaaggaagaaaaaaaTTTATTTTTAACCCTCGAATTTTGAATGTCTATTCTTTACCACAGCTCTGCCTATCCTAAATAATACATAACTAGTATCG--CTTTGTCAATTGTCCTT i dasNov3.JH569232 C 0 I 33 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=1337765.000000 s hg38.chr9_KI270719v1_random 36798 173 + 176845 GAGGCTCCTAACTTTATCAGGTGAATTTTAAGATATCTGTGAggctgggcacggtggctcacacctgtaatcccagcactttgagaggctgaggcaggcggatcagaaggccaggagttcaagaccagcctggccaacatggtgaaacctcgtctct-actaaaaagaaaaaaa s panTro5.chr4 135061563 173 + 194502333 GAGGCTCCAAACTTTATCAGGTGAATTTTAAGACATCTACGAggctgggcacggtggctcacacctgtaatcccaccactttgggaggctgaggcaggcggatcatgaggccaggagttcaaaaccagcctggccaacatggtgaaacctcgtccct-actaaaaagaaaaaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42117 173 - 70559 GAGGCTCCTAACTTTATCAGGTGAATTTTAAGACATCTGTGAggctgggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcaggcggatcatgaggccaggagttcaagaccagcctggccaacatggtgaaacctcgtctct-actaaaaagaaaaaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455689 173 - 115148730 GAGGCTCCTAACTTTATCAGGTGAATTTTAAGACATCTATGTggctgggcacagtggctcacacctgtaatcccagcactttggggggctgaggcgggaggatcacgaggccaggagttcaagaccagcctggccaacatggtgaaatctcgtctct-actaaaaagaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131397855 172 + 190429646 GAGGCTCCTAACTTTATTAGGTGAATTTTAAGACCTCTATGTgaccaggcatggtggctcatgcctgtaatcccagcactttgggaggcagaggcgggtgaatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaacctcattgct-ac-aaaaagaaaagaa i rheMac8.chr5 C 0 I 32 s macFas5.chr5 130916862 172 + 189454096 GAGGCTCCTAACTTTATCAGGTGAATTTTAAGACCTCTATGTgaccaggcatggtggctcatgcctgtaatcccagcactttgggaggcagaggcgggtgaatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaacctcattgct-ac-aaaaagaaaagaa i macFas5.chr5 C 0 I 33 s macNem1.NW_012010911v1 34908196 172 - 40319822 GAGGCTCCTAACTTTATCAGGTGAATTTTAAGACCTCTATGTgaccaggcatggtggctcacgcctgtaatcccagcactttgggaggcagaggcgggtgaatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaacctcattgct-ac-aaaaagaaaagaa i macNem1.NW_012010911v1 C 0 I 24 s cerAty1.NW_012000798v1 4462268 172 - 9219162 GAGGCTCCTAACTTTATCAGGTGAATTTTAAGACCTCTATGTgaccaggcatggtgactcatgcctgtaatcccagcactttgggaggcagaggcgggtgaatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaacctcattgct-ac-aaaaagaaaagaa i cerAty1.NW_012000798v1 C 0 I 29 s chlSab2.chr7 78987342 172 + 135778131 GAGGCTCCTAACTTTATCAGGTGAATTTTAAGACATCTATGTgaccgggcgtggtggctcacgcctataatcccagtactttgggaggcagaggagggtggaccacgaggtcaggagttcaagaccagcctggccaacatggtgagacctcattgct-ac-aaaaagaaaagaa i chlSab2.chr7 C 0 I 22 s manLeu1.NW_012103277v1 2753998 172 - 3013352 GAGGCTCCTAACTTTATCAGGTGAATTTTAAGACCTCTCTGTgaccaggcatggtggctcatgcctgtaatcccagcactttgggaggcagaggcgggtgaatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaacctcattgct-ac-aaaaagaaaagaa i manLeu1.NW_012103277v1 C 0 I 9 s colAng1.NW_012114544v1 5985642 171 + 8656713 GAGGCTCCTAACTTTATCAGGTGAATTTTAAGACCTCTATGTgaccgggcgtggtggctcacgcctgtaatcccagcactttgggaggcagaggcgggtgga-cacgaggtcaggagttcaagactagcctggccaacatggtgaaacctcattgct-ac-aaaaagaaaagaa i colAng1.NW_012114544v1 C 0 I 32 s calJac3.chr3 129413180 173 - 190850796 GAAGCTCCTAACTTTATCAGGTGAATGTTAAGGCATCAATGTggccaggtgtggtggctcatgcctgtaatcacagtactttgggaggccaaggtgggtggatcacaaagtcaggagttcaagaacagcctggccaaaatggtgaaatcctgtctct-gctacaaatacaaaat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6498665 173 - 25294431 GAGGCTCCTAACTTTATCAGGTGAATGTTAAGACCCCAATGTggccaggggtggtggctcatgcctgtaatctcagtagtttgggaggccaaggtgggtggatcatgaagtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctct-gctacaaatacaacat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4053247 174 - 6311556 GACGCTCCTAACTTTATCAGGTGAATGTTAAGGCATCAATGCTgccaggcatggtggctcatgcctgtaatcccagtactttgggaggccaaggttggtgggtcacaaagtcaggagttagaggccagcctggccaagatggtgaaaccctgtctctagctacaaatacaaaat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14909137 172 + 15034901 GAAGCTCCTAACTTTATCAGGTGAATGTTAAGGCATCAATGTggccaggggtggtggctcatgcctgtaatcccagtagtttgggaggccaaggtgggtggatcatgaagtcaggagttcgagaccagcctagccaacatggtgaaaccctgtctct-gctacaaata-aacat i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743345 33 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=117214.000000 s hg38.chr9_KI270719v1_random 36971 22 + 176845 ttagctaggtatggtggcgctc s panTro5.chr4 135061736 22 + 194502333 ttagctaggtgtggtggcagtc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42290 22 - 70559 ttagctaggtgtggtggcgctc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455862 22 - 115148730 ttagctaggtgtggtggcggtt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398059 22 + 190429646 ctatctggatgtggtggaggtt i rheMac8.chr5 I 32 C 0 s macFas5.chr5 130917067 22 + 189454096 ctatctggatgtggtggaggtt i macFas5.chr5 I 33 C 0 s macNem1.NW_012010911v1 34908392 22 - 40319822 ctatctggatgtggtggaggtt i macNem1.NW_012010911v1 I 24 C 0 s cerAty1.NW_012000798v1 4462469 22 - 9219162 ctatctggatgtggtggaggtt i cerAty1.NW_012000798v1 I 29 C 0 s chlSab2.chr7 78987536 22 + 135778131 atatctggatgtgttggaggtt i chlSab2.chr7 I 22 C 0 s colAng1.NW_012114544v1 5985845 22 + 8656713 ctatctggatgtggtggaggtt i colAng1.NW_012114544v1 I 32 C 0 s calJac3.chr3 129413353 22 - 190850796 ttagttgggtatggtggtgggt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6498838 22 - 25294431 ttagctaggtatggttgtgggt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4053421 22 - 6311556 ttagctgggtatggtggtgggt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14909309 22 + 15034901 ttagctgggtatggtggtgggt i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743345 33 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e manLeu1.NW_012103277v1 2754170 9 - 3013352 I a score=859331.000000 s hg38.chr9_KI270719v1_random 36993 112 + 176845 gcctgcagttccaactactcgggaggttgaggcaggagaattgtgtgaacccgggaggcagaggttgcagtgagccgagatcgtgccactgcataccagcctgggtgacagg s panTro5.chr4 135061758 112 + 194502333 acctgcagttccaactactcaggaggttgaggaaggagaattgtctgaacccgggaggtggaggttgcagtgagccgagatcgtgccactgcataccagcctgggtgacagg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42312 111 - 70559 gcctgcagttccaactactcgggaggttgaggcaggagaattgtctgaacccgggagg-ggaggttgcagtgagccgagatcgtgccactgcataccagcctgggtgacagg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455884 112 - 115148730 gcctgcaattccaactactcaggaggctgaggcaggagaattgtctgaacccgggaggcggaggttacagtgagccaagatcgtgctactgcataccagcctgggtgacagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398081 112 + 190429646 gcctataattccagctactcaggaggctgaggcaggagaattgtctgaacccgggaggtggaggttgcagtaaaccgagataacaccactgcactccagcctgggcgacaag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917089 112 + 189454096 gcctataattccagctactcaggaggctgaggcaggagaattgtctgaacccgggaggtggaggttgcagtaaaccgagatcacaccactgcactccagcctgggcgacaag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908414 111 - 40319822 gcctataattccagctactcaggaggctgaggcaggagaattgtctgaacccgggaggcggaggttgcagtaaaccgagatcacaccactgcactcc-gcctgggcgacaag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462491 112 - 9219162 gcctgtaattccagctactcaggaggctgaggcaggagaattgtctgaacccgggaggcggaggttgcagtgaaccgagatcacaccactgcactccagcctgggcgacaag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987558 112 + 135778131 gcctgtaattccagctactcaggagggtgagccaggagaattgtctgaatccgggaggcggaggttgcagtgagccgagatcacaccactgcactccactctgggcaacaag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754179 112 - 3013352 gaaagaaaaaacagctactcaggaggctgaggcaggagaattgtctgaacccaggaggcggaggttgcagtgaaccgagatcacaccactgcactccagcctgggcgacaag i manLeu1.NW_012103277v1 I 9 C 0 s colAng1.NW_012114544v1 5985867 112 + 8656713 gcctgtaattccagctactcaggaggctgaggcaggagaattgtctgaacccgggaggcggaggttgcagtgagctgagatcacatcactgcactccagcctgggtgacaag i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129413375 112 - 190850796 gcctgtagtaccagctacttggaaggctgcgacaggagaattgtttgaaaccaggaggtggaggctgcagtgagcggagatcatgccattgctttccagactgggggacagg i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6498860 112 - 25294431 accggtagtaacagctacttgggaggctgtaacaggagaattgtttgaacccaggaggtggaggttgccgtgagccgagatgatgccattgcattccagcctgggggacagg i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4053443 112 - 6311556 gcctgtagtaccagctacttgggaggctgcgacaggaaaattgtttgaacccaggaggtagaagttgcagtaagcagagatcatgccattacactccagcctgggggacagg i cebCap1.NW_016107420v1 C 0 I 796 s aotNan1.NW_018507635v1 14909331 112 + 15034901 gcctgtattaccagctacttgagaggctgcgacaggagaattgtttgaacccaggaggtggaggttgcagtgagcagagatcatgccattgtattccagcctgggggacagg i aotNan1.NW_018507635v1 C 0 I 805 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743345 33 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=108354.000000 s hg38.chr9_KI270719v1_random 37105 34 + 176845 caagactatatctca--------aaatacatacatacataca s panTro5.chr4 135061870 38 + 194502333 caagactatatctca----aaataaataaatacatacataca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42423 38 - 70559 caagactatatctca----aaataaataaatacatacataca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90455996 42 - 115148730 caagactatatctcaaaataaataaataaaTACATACATACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398193 30 + 190429646 caaggctatatctct----aaataaataa--------aTAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917201 30 + 189454096 caaggctatatctct----aaataaataa--------aTAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908525 30 - 40319822 caaggctatatctct----aaataaataa--------aTAAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462603 30 - 9219162 caaggctatatctct----aaataaataa--------aTAAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987670 30 + 135778131 ggagactatgtctct----aaataaataa--------ataaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754291 30 - 3013352 caaggctatatctct----aaataaataa--------aTAAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5985979 30 + 8656713 cgagaccatatctct----aaataaataa--------ataaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129413488 33 - 190850796 cgagacttcgtctca----aaagaagaca-----tttatgca i calJac3.chr3 I 1 I 4 s saiBol1.JH378129 6498973 33 - 25294431 cgagactctgtctca----aaagaagata-----tttatgca i saiBol1.JH378129 I 1 I 761 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743345 33 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e aotNan1.NW_018507635v1 14909443 805 + 15034901 I e cebCap1.NW_016107420v1 4053555 796 - 6311556 I a score=38877.000000 s hg38.chr9_KI270719v1_random 37139 7 + 176845 tacaaac s panTro5.chr4 135061908 7 + 194502333 tacaaac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42461 7 - 70559 tacaaac i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456038 7 - 115148730 TACAAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398223 7 + 190429646 TACAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917231 7 + 189454096 TACAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908555 7 - 40319822 TACAAAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462633 7 - 9219162 TACAAAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987700 7 + 135778131 TATAAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754321 7 - 3013352 TACAAAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5986009 7 + 8656713 tacaaaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129413525 6 - 190850796 -acaaac i calJac3.chr3 I 4 C 0 s saiBol1.JH378129 6499767 5 - 25294431 --TAAAA i saiBol1.JH378129 I 761 C 0 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743345 33 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e aotNan1.NW_018507635v1 14909443 805 + 15034901 I e cebCap1.NW_016107420v1 4053555 796 - 6311556 I a score=9555.000000 s hg38.chr9_KI270719v1_random 37146 1 + 176845 a s panTro5.chr4 135061915 1 + 194502333 a i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42468 1 - 70559 a i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456045 1 - 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398230 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917238 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908562 1 - 40319822 A i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462640 1 - 9219162 A i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987707 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754328 1 - 3013352 A i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5986016 1 + 8656713 a i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129413531 1 - 190850796 a i calJac3.chr3 C 0 I 759 s saiBol1.JH378129 6499772 1 - 25294431 A i saiBol1.JH378129 C 0 I 2 s cebCap1.NW_016107420v1 4054351 1 - 6311556 a i cebCap1.NW_016107420v1 I 796 C 0 s aotNan1.NW_018507635v1 14910248 1 + 15034901 a i aotNan1.NW_018507635v1 I 805 C 0 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743345 33 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=109509.000000 s hg38.chr9_KI270719v1_random 37147 13 + 176845 cat-ataTGTAATG s panTro5.chr4 135061916 13 + 194502333 cat-ataTGTAATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42469 13 - 70559 cat-ataTGTAATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456046 14 - 115148730 CATAATATGTAATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398231 13 + 190429646 CAT-CTATGTAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917239 13 + 189454096 CAT-CTATGTAATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908563 13 - 40319822 CAT-CTATGTAATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462641 13 - 9219162 CAT-CTATGTAATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987708 13 + 135778131 CAT-CTATGTAATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754329 13 - 3013352 CAT-CTATGTAATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5986017 13 + 8656713 CAT-CTATGTAATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129414291 13 - 190850796 CAT-CTATGTAATG i calJac3.chr3 I 759 C 0 s saiBol1.JH378129 6499775 13 - 25294431 CAT-CTATGTAATG i saiBol1.JH378129 I 2 C 0 s cebCap1.NW_016107420v1 4054352 13 - 6311556 CAT-CTATGTAATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14910249 13 + 15034901 CAT-CTATGTAATT i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26314681 204 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743345 33 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=88008.000000 s hg38.chr9_KI270719v1_random 37160 9 + 176845 TATAAATAT s panTro5.chr4 135061929 9 + 194502333 TATAAATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42482 9 - 70559 TATAAATAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456060 9 - 115148730 TATAAATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398244 9 + 190429646 TATAAATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917252 9 + 189454096 TATAAATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908576 9 - 40319822 TATAAATAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462654 9 - 9219162 TATAAATAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987721 9 + 135778131 TATAAATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754342 9 - 3013352 TATAAATAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5986030 9 + 8656713 TATAAATAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129414304 9 - 190850796 AATAAATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6499788 9 - 25294431 AATAAATAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4054365 9 - 6311556 AATAAATAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14910262 9 + 15034901 AATAAATAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26314885 9 - 93316391 TATAAATAT i micMur3.chr14 I 204 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743345 33 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=1480974.000000 s hg38.chr9_KI270719v1_random 37169 159 + 176845 TACCTTTTTGTCATCTATT--------TAACAAAATATTTGCTCAAATATATACTTCCATCTGAC--AACTATTTAACATTACTTTTCTAATATttttaccttattgctgctgacttgatac-----a-ttttt--attcattccactacatccttgttattttggaagatctatc--c s panTro5.chr4 135061938 160 + 194502333 TACCTTTTTGTCATCTATT--------TAACAAAATATTTGCTCAAATATAtccttccatctgac--aactatttaacattacttttctaatatttttactttattgctgctgacttgatac-----atttttt--attcattccactacatccttgttattttggaatatctatc--c i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42491 159 - 70559 TACCTTTTTGTCATCTATT--------TAACAAAATATTTGCTCAAATATAtccttccatctgac--aactatttaacattacttttctaatatttttaccttattgctgctgacttgatac-----a-ttttt--attcattccactacatccttgttattttggaagatctatc--c i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456069 160 - 115148730 TACCTTTTTGTCATCTATT--------TAACAAAATATTTGCTCAAATATAtccttccatctgac--aactatttaacattacttttctaatatttttactttatggctgctgacttgatac-----atttttt--attcattccactacatccttgttattttggaagatctatc--c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398253 162 + 190429646 TACCTTTTTGTCATCTAGT--------TAACAAAATATTTGCTCAAATATATCCTTCCATCTGAC--AACTATTCAACATTACTTTTCTAATATttttactttagtgctgcttgtttgatac-----atttttttaattcattctactacatccttgttattttggaagatctatc--t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917261 162 + 189454096 TACCTTTTTGTCATCTAGT--------TAACAAAATATTTGCTCAAATATATCCTTCCATCTGAC--AACTATTCAACATTACTTTTCTAATATttttactttagtgctgcttgtttgatac-----atttttttaattcattctactacatccttgttattttggaagatctatc--t i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908585 162 - 40319822 TACCTTTTTGTCATCTAGT--------TAACAAAATATTTGCTCAAATATATCCTTCCATCTGAC--AACTATTCAACACTACTTTTCTAATATttttactttagtgctgcttgtttgatac-----attgttttaattcattctactacatccttgttattttggaagatctatc--t i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462663 167 - 9219162 TACCTTTTTGTCATCTAGT--------TAACAAAATATTTGCTCAAATATATCCTTCCATCTGAC--AACTATTCAACATTACTTTTCTAATATTTTTACTTTATTGCTGCTTATTTGATACTTTTTTTTTTTTTAATTCATTCTACTACATTctttttattttggaagatctatc--t i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987730 163 + 135778131 TACCTTTTTGTCATCTAGT--------TAACAAAATATTTGCTCAAATATGtccttccatctgac--aactatttaacattacttttctaatatttttactttattgatgcttatttgatac-----atttttt-aattcattctactatatccttgttattttggaatatctatcatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754351 162 - 3013352 TACCTTTTTGTCATCTAGT--------TAACAAAATATTTGCTCAAATATATCTTTCCATCTGAC--AACTATTCAACATTACTTTTCTAATATttttactttattgctgcttatttgatac-----attttttaaattcattctactacatccttgttattttggaagatctatc--t i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5986039 169 + 8656713 TACCTTTTTGTCACCTAGTTTGCTAGATGACAAAATATTTGCTCAAATATATCCTTCCATCTGAC--AACTATTCAACATTACTTTTCTAATATttttactttattgctgcttatttgatac-----atatttt-aattcattctactacatccttattattttggaaggtctatc--t i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129414313 158 - 190850796 TA--TGTATGTCATCTATT--------TAACAGAATATGTTGTTAAATATATCCTTTCATCTGAC--AACTATTTAGCATTACTTTTGTAATATTGTTACTTTATTGCTGCTGACTTGATAC-----TTTTTTT--ATTCATTTGACTACATCCTTGTTATTTTGGAAGATCTATC--C i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6499797 160 - 25294431 TACCTGTTTGTCATCTATT--------TAACAAAATGTGTTGTTAAATATATCCTTCCATCTGAC--AACTATTTAGCATTACTTTTGTAATATttttactttattgctgctgacttgacac-----atttttt--attcattcaactacatccttgttattttggaagatctatc--c i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4054374 152 - 6311556 TA--TGTTTGTCATCTATT--------TAACAAAATGTGTTG-------TAtccttccatctgac--agctatttagcattatttttgtaatatttttactttattgctgctgacttgatac----attttttt--attcattcgactacatccttgttattttggaagatctatc--c i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14910271 160 + 15034901 TACTTGTTTGTCATCTATT--------TAACAAAATATGTTGTTAAATATATCCTTCCATCTGAC--AACTATTTAGCATTACTTTTGTAATATTTTTACTTCATTGCTGCTGACTTTATAC-----ATTTTTT--ATTCATTCAACAACATccttgttattttggaagatctatc--c i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26314894 158 - 93316391 TACCTTTTT-TCACATATT--------TAACAAAAT-TTTTCTCAAGTTTATCCTTTCATCTGAC--AACTATTTAGCATTATTTTCCTAATAGTTTCACTTTCTTACTGCCCACTTGATAA-----ATTTTCT--ATTCATTCCCTTATATCCTTGTTATTTTGGAAGATCTATC--C i micMur3.chr14 C 0 I 394 s dasNov3.JH569232 1743378 143 + 5974691 TAATTCTTTGTCATTTAAT--------TAGCAAAGTATTTTCTCAAATATATCTTTCCTTCTGACTTAATTATCTTATATTACTTTTCTAATATTTTTGCCTTC---ATGTCCACTTGAAAA-----AATTACT--AT----------------ttattattttggaagatccact--a i dasNov3.JH569232 I 33 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=724725.000000 s hg38.chr9_KI270719v1_random 37328 78 + 176845 ----tttatttctttattaaggggtatcttcaattt-tttgacctcacaattagatgcataattttcaagtactatttgaaat s panTro5.chr4 135062098 78 + 194502333 ----tttatttctttattaaggggtatcttcaattt-tttgacctcacaattagatgcataattttcaagtactatttgaaat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42650 78 - 70559 ----tttatttctttattaaggggtatcttcaattt-tttgacctcacaattagatgcataattttcaagtactatttgaaat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456229 78 - 115148730 ----tttatttctttattaaggggtatcttcaattt-tttgacctcacaattagatgcataattttcaagtactatttgaaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398415 78 + 190429646 ----tttttttctttattaaggggtatcttcaactt-tttgacctcacaattagatgcataattttcaagtactatttgaaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917423 78 + 189454096 ----tttttttctttattaaggggtatcttcaactt-tttgacctcacaattagatgcataattttcaagtactatttgaaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908747 78 - 40319822 ----tttttttctttattaaggggtatcttcaactt-tttgacctcacaattagatgcataattttcaagtactatttgaaat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462830 78 - 9219162 ----tttttttctttattaaggggtatcttcaactt-tttgacctcacaattagatgcataattttcaagtactatttgaaat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987893 78 + 135778131 ----tttttttctttattaaggggtatcttcaattt-tttgacctcacaattagatgcatatttttcaagtactatttgaaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754513 78 - 3013352 ----tttttttctttattaaggggtatcttcaactt-tttgacctcacaattagatgcataattttcaagtactatttgaaat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5986208 78 + 8656713 ----tttttttctttattaaggggtatcttcaattt-tttgacctcacaattagatgcataattttcaagtactatttgaaat i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129414471 78 - 190850796 ----TTTTTTTCTTTATTAAGATATATGTTCAATTT-TTTGCCCTCATGATTAGATGCATAATTTTCAAGTACTATTTGAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6499957 77 - 25294431 -----tttcttctttagtaagacgtatcttcagtct-tttgccctcacaattagatgcataattttcaagtgctatttgaaat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4054526 77 - 6311556 -----ttttttctttattaagatgtatcatcaattt-tttgccctcacaattagatgcataattttcaagtactatctgatac i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14910431 77 + 15034901 -----ttttttctttattaagatgtatcttcaattt-tttgccctcacaattagatgcataattttcaagtactatttgaaat i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1743521 79 + 5974691 ttattgtacttcttaatgaagggttatcttccctttacttgccctcagagttagatg----attttcaagtactatttgaaat i dasNov3.JH569232 C 0 I 710 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=2495946.000000 s hg38.chr9_KI270719v1_random 37406 319 + 176845 aaagataccttctattgtcttagcaaattagtcaatttctctacttacccctcctcaataagttgacaaattc-aaaaaacataaatttcccca-tttctttttcaccactcccctccaagaaaccttggaaCCAGTTTGTTCCAAGGTTTGTTCCCACCAAAGTCTAGATTATACAAAAATATTTTAGAATGTTAATGATATATTGTTAGTAAAATTCTTCTATTGAATAGTTTATGATAATTTGTCAACATGAAATGTTAGGCAGACATT-GAATACCAACTAGAGCTATTCATATTCTCTTAACGGGATTTCCATTGAG s panTro5.chr4 135062176 319 + 194502333 aaaaataccttctattgtcttagcaaattagtcaatttctctacttacccctcctcaataagttgacaaattc-aaaaaacataaatttcccca-tttctttttcaccactcccctccaagaaaacttggaaCCAGTTTGTTCCAAGGTTTGTTCCCACCAAAGTCTAGATTATACAAAAACATTTTAGAATGTTAATGATATATTGTTAGTAAAATTCTTCTGTTGAATAGTTTATGATAATTTGTCAACATGAAATGTTAGGCAGACATT-GAATACCAACTACAGCTATTCATATTCTCTTAACAGGATTTCCATTGAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 42728 319 - 70559 aaagataccttctattgtcttagcaaattagtcaatttctctacttacccctcctcaataagttgacaaattc-aaaaaacataaatttcccca-tttctttttcaccactcccctccaagaaaccttggaaCCAGTTTGTTCCAAGGTTTGTTCCCACCAAAGTCTAGATTATACAAAAATATTTTAGAATGTTAATGATATATTGTTAGTAAAATTCTTCTATTGAATAGTTTATGATAATTTGTCAACATGAAATGTTAGGCAGACATT-GAATACCAACTAGAGCTATTCATATTCTCTTAACGGGATTTCCATTGAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456307 307 - 115148730 aaagataccttctattgtcttagcaaattaatcaatttctctacttatccctcctcaataagttgacaaattc-aaaaaacataaatttcccca-tttctttttcaccactcccctccaagaaaccttggaaCCA------------GTTTGCTCCCACCAAAGTCTAGATTATACAAAAATATTTTAGAATGTTAATGATATATTGTTAGTAAAATTCTTCTATTGAGTAGTTTATGATAATTTGTCAACTTGAAATGTTAGGCAGACATT-GAATACCAGCTAGAGCTATTCATATTCTCTTAGCGGGATTTCCATTGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398493 318 + 190429646 aaagataccatctgttctctcagcaaattagttaatttctctacttacccctcctcaataagttgacaaattc-aaaaagtgtaaatttcctca-tttctttttcacaactccccttcaagaaaccttggaaCCAGTTTGTTCCATGGTTTGTTCCCATCAAAGTCTAGATTATACAAAAATATTTTAGAATGTTAATGATATATTGCTAGCAAAATTTTTCTATTGAATAATTTTTGATAACTT-TCAACATGAAATGTTAGGCAGACATT-GAAAACCAACTAGAGCCATTCATATTCTCTTTAACGGATTTCCATTGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917501 318 + 189454096 aaagataccatctgttctctcagcaaattagttaatttctctacttacccctcctcaataagttgacaaattc-aaaaagtgtaaatttcctca-tttctttttcacaactccccttcaagaaaccttggaaCCAGTTTGTTCCATGGTTTGTTCCCATCAAAGTCTAGATTATACAAAAATATTTTAGAATGTTAATGATATATTGCTAGCAAAATTTTTCTATTGAATAATTTTTGATAACTT-TCAACATGAAATGTTAGGCAGACATT-GAAAACCAACTAGAGCCATTCATATTCTCTTAAACGGATTTCCATTGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34908825 317 - 40319822 aaagataccatctgttctctcagcaaattagttaatttctctacttaccactcctcaataagttgacaaattc-aaaaagtgt-aatttcctca-tttctttttcacaactccccttcaagaaaccttggaaCCAGTTTGTTCCATGGTTTGTTCCCATCAAAGTCTAGATTATACAAAAATATTTTAGAATGTTAATGATATATTGCTAGCAAAATTTTTCTATTGAATAATTTTTGATAACTT-TCAACATGAAATGTTAGGCAGACATT-GAAAACCAACTAGAGCCATTCATATTCTCTTAAACGGATTTCCATTGAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4462908 318 - 9219162 aaagataccatctgttctctcagcaaattagttaatttctctacttacccctcctcaataagttgacaaattc-aaaaagtgtaaatttcctca-tttctttttcacaactccccttcaagaaaccttggaaCCAGTTTGTTCCATGGTTTGTTCCCATCAAAGTCTAGATTATACAAAAATATTTTAGAATGTTAATGATATATTGCTAGCAAAATTCTTCTATTGAATAATTTTTGATAACTT-TCAACATGAAATGTAAGGCAGACATT-GAAAACCAACTAGAGCCATTCATATTCTCTTAAAGGGATTTCCATTGAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78987971 319 + 135778131 aaaaataccattggttctctcagcaaattagttaatttctctacttacccctccacactaagttgacaaattc-aaaaaacatacatttcctcatttTTTTTTTCACAACTGCCCTTCAAGAAACCTTGGAACCAGTTTGTTCCAAGGTTTGTTCCCATCAAAGTCCAGATTGTACAAAAATATTTTAGAATGTTAATGATATATTGCTAGCAAAATTCTTCTAATGAATAATTTATGATAACTT-TCAACATGAAATATTAGGCAGACATT-GAAAACCACCTAGAGCTATTCATATTCTCCTAAAGGGATTTCCATTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754591 318 - 3013352 aaagataccatctgttctctcagcaaattagttaatttctctacttacccctcctcaataagttgacaaattc-aaaaagtgtaaatttcctca-tttctttttaacaactccccttcaagaaaccttggaaCCAGTTTGTTCCATGGTTTGTTCCCATCAGAGTCTAGATTATACAAAAATATTTTAGAATGTTAATGATATATTGCTAGCAAAATTCTTCTATTGAATAATTTTTGATAACTT-TCAACATGAAATGTTAGGCAGACATT-GAAAACCAACTAGAGCCATTCATATTCTCTTAAAGGGATTTCCATTGAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5986286 317 + 8656713 aaagataccatctgttctctcagcaaattagttaatttctctacttacccctcctcagtaagttgaCAAATTC-AAAAAGTATAAATTTCCTCA-TTTTTTTTTCACAACTCCCCTTCAAGAAACCTTGGAACCAGTTTGTTCTAAGGTTTGTT-CCATCAAAGTCTAGATTATACAAAAATATTTTAGAATGTTAATGATATATTGCTAGCAAAATTCTTCTATTGAATAATTTTTGATAACTT-TCAACATGAAATGTTAGGCAGACATT-GAAAACCAACTAGAGCTATTCATATTCTCTTAAAGGGGTTTCCATTGAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129414549 317 - 190850796 GAAGATACACTCTCTTGT-TTAGCAAGTTAGCCAATTTCTCTACTTATCCCTTCTCAATAAGGAGATAAATTCAAAAAAACATAAATTTCCTCA-TTTCTTTTTCACTACCCCCCACCAAGAAACCTTGGAACCAGTTTGTCCCATAGTTTGTTTCCACCAAAGTCT-GATTATACAAAAATATTTTAGAATGTTAATGACATATTGTTAGTAAAATTCTTCTACTTATAA--TGATGATAATTTGTCAACATGAAATGTTAGGCAGACATTAAAAAACCAACTAACGCTATTCATATTCTCTTAAAGGAATTTTCATTGAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6500034 317 - 25294431 gaagatacactctattgt-ttagcaagttagtcaatttctctactcatcccttctcaataagaagataaattc-aaaatacattaatttcccca-tttctttttcactactcctcaccaagaaaccatggaagcagtttgtcccgaagtttgttcccaccaaagtctagattatacaaaaatagtttagaatgttaatgatacattgctagtaaaatttttcCACTGATAA--TCATGATAATTTGTCAACATGAAATGTTAGGCAGACATTAAAAAACCAACTAGAGCTATTCATATTCTCTTAAAGGAATTTTCATTTAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4054603 315 - 6311556 gaagatacactgtattgt-ttagcaagttagtcaatttctctacttatcccttctcaat--gaagataaattc-aaaaaacataaatttcccca-tttctttttcagtactcctcaccaagaaaccttggaaCCAATTTGTCCCAAAGTTTATTCCCACCAAGGTCTAGAATATACAAAAATATTTTAGAATGTTAATGGTATATTGTTAGTAAAATTCTTCTACTGACAA--TCACGATAATTTGTCAACATGAAATGTTAGGCAGACATTAAAAAACCAACTAAAGCTATTCATATTCTCTTAAAGGAATTTTCATTGAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14910508 317 + 15034901 gaagatacactctattgt-ttagcaagttagtcaatttctctacttatcccttctcaataagaagacaagttc-aaaaaacataaatttcccca-tttctttttcactactccccatgaagaaaccttggaaacagtttgtcccaaagtttgttcccaccaaagtctaggttatacaaaaatattttagaatgttaatgatatattgttagtaaaattcttctACTGATAA--TCATGATAATTTGTCAACATGAAATGTTAGGCAGACATTAAAAAACCAACTAGAGCTATTCATATTCTCTTAAAGGAATTTTCATTGAG i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743600 710 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44035397 33 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=355726.000000 s hg38.chr9_KI270719v1_random 37725 38 + 176845 TTATTGATGAAAGATAAAGTGATATAAAGAAAATGTGT s panTro5.chr4 135062495 38 + 194502333 TTATTGATGAAAGATAAAGTGATATAAAGAAAATGTGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 43047 38 - 70559 TTATTGATGAAAGATAAAGTGATATAAAGAAAATGTGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456614 38 - 115148730 TTATTGATGAAAGATAAAGTGATATAAAGAAAATGTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398811 38 + 190429646 TTATGGATGAACGATAAAGTGATATAAAGAAAATGTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130917819 38 + 189454096 TTATGGATGAACGATAAAGTGATATAAAGAAAATGTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34909142 38 - 40319822 TTATGGATGAACGATAAAGTGATATAAAGAAAATGTGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4463226 38 - 9219162 TTATGGATGAATGATAAAGTGATATAAAGAAAATGTGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78988290 38 + 135778131 TTATGGATGAAGGATAAAGTGATATAAAGAAAATGTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2754909 38 - 3013352 TTATGGATGAAAGATAAAGTGATATAAAGAAAATGTGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5986603 38 + 8656713 TTATGGATGAACGATAAAGTGATATAAAGAAAATGTGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129414866 38 - 190850796 TTATTGATGAATGATAAAGTGATGTAAAGAAAATGTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6500351 38 - 25294431 TTATTGATGAATGATAAAGTGATATAAAAAAAATGTGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4054918 38 - 6311556 TTATTGATGAATGATAAAATGATATAAAGAAAATGTGT i cebCap1.NW_016107420v1 C 0 I 366 s aotNan1.NW_018507635v1 14910825 38 + 15034901 TTATTGATGAATGATAAAGTGATATAAAGAAAATGTGT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44035430 36 - 53741614 TTTTGGATGAAACAGAGAGAGGGATAA--AAAGTGTGT i canFam3.chr19 I 33 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743600 710 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=189081.000000 s hg38.chr9_KI270719v1_random 37763 31 + 176845 ATACACCA-----------AG-TGCAAAATATTTTATACCCTT s panTro5.chr4 135062533 31 + 194502333 ATACACCG-----------AG-TGCAAAATATTTTATACCCTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 43085 31 - 70559 ATACACCG-----------AG-TGCAAAATATTTTATACCCTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456652 31 - 115148730 ATACACCA-----------AG-TGCAAAATATTTTATACCCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398849 31 + 190429646 ATAAACTG-----------AG-TACAAAATATTTTATACCCTT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130917857 31 + 189454096 ATAAACTG-----------AG-TACAAAATATTTTATACCCTT i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34909180 31 - 40319822 ATAAACTG-----------AG-TACAAAATATTTTATACCCTT i macNem1.NW_012010911v1 C 0 I 1 s cerAty1.NW_012000798v1 4463264 31 - 9219162 ATAAACTG-----------AG-TACAAAATATTTTATACCCTT i cerAty1.NW_012000798v1 C 0 I 1 s chlSab2.chr7 78988328 31 + 135778131 ATACATTG-----------AG-TACAAAATATTTTATACCCTT i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012103277v1 2754947 31 - 3013352 ATAAACTG-----------AG-TACAAAATATTTTATACCCTT i manLeu1.NW_012103277v1 C 0 I 1 s colAng1.NW_012114544v1 5986641 31 + 8656713 ATACACTG-----------AG-TACAAAATATTTTATACCCTT i colAng1.NW_012114544v1 C 0 I 1 s calJac3.chr3 129414904 42 - 190850796 ATACACTGAGATACTACAAAG-TACAAACTATTTGATCCCCTT i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6500389 42 - 25294431 GTACACTGAGATACTACAAAG-TACAAACCATTTGATCCCCTT i saiBol1.JH378129 C 0 I 1 s aotNan1.NW_018507635v1 14910863 42 + 15034901 ATACACTGAGATACTACAAAG-TACAAACTATTTGATCCCCTT i aotNan1.NW_018507635v1 C 0 I 1 s canFam3.chr19 44035466 27 - 53741614 ATATATAA-----------AGATATAAAAAACTGTAAA----- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743600 710 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4054956 366 - 6311556 I a score=1083883.000000 s hg38.chr9_KI270719v1_random 37794 140 + 176845 TATGTGGCCATGAATATTAAATCATAGTTATGGGAGGAAATTGCC-AAATACATATATTAGGCTGTTAAAAACTGTTTTTCTGAGCTCTGGAAACTGATGGATAGGCATAGCAGAAGAGAGCAGAAGCAAGCCAAGAAATC s panTro5.chr4 135062564 136 + 194502333 TATGTGGCCATGAATATTAAATCATAGTTATGGGAGGAAATTGCC-AAATACACATATTAGACTGTTAAAAACTGTT----TGCGCTCTGgaaactgatgcataggcatagcagaagagagcagaagcaAGCCAAGAAATC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 43116 138 - 70559 TATGTGGCCATGAATATTAAATCATAGTTATGGGAGGAAATTGCC-AAATACATATATTAGGCTGTTAAAAACTGTT-TTCTGAGCTCTGGAAACTGATGGATAGGCATAGCAGAAGAGAGCAG-AGCAAGCCAAGAAATC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456683 136 - 115148730 TATATGGCCATGAATATTAAATCATAGTTATGGGAGGAAATTGCC-AAATACACATATTAGGCTGTTAAAAACTGTC----TGAGCTCTGGAAACTGATGGATAGGCATAGCAGAAGAGAGCAGAAGCAAGTGAAGAAATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131398881 132 + 190429646 TATATAGCCATGAATATTAAGTCATAGGTATGGGAGAAAATTGCC-AAAAACACACATTAGGCTGTTAAAAAC--------TGAGCCCTGGAAATTGATGGATAGGCATAGCAGAAGAGAGCAGAAGCAAGTCAAGCAATC i rheMac8.chr5 I 1 C 0 s macFas5.chr5 130917889 132 + 189454096 TATATAGCCATGAATATTAAGTCATAGGTATGGGAGAAAATTGCC-AAAAACACACATTAGGCTGTTAAAAAC--------TGAGCCCTGGAAATTGATGGATAGGCATAGCAGAAGAGAGCAGAAGCAAGTCAAGCAATC i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34909212 132 - 40319822 TATATAGCCATGAATATTAAGTCATAGGTATGGGAGAAAATTGCC-AAAAACACACATTAGGCTGTTAAAAAC--------TGAGCCCTGGAAATTGATGGATAGGCATAGCAGAAGAGAGCAGAAGCAAGTCAAGCAATC i macNem1.NW_012010911v1 I 1 C 0 s cerAty1.NW_012000798v1 4463296 132 - 9219162 TATATAGCCATGAATATTAAGTCATAGGTATGGGAGAAAATTGCC-AAAAACACACATTAGGCTGTTAAAAAC--------TGAGCCCTGGAAATTGATGGATAGGCATAGCAGAAGAGAGCAAAAGCAAGTCAAGCAATC i cerAty1.NW_012000798v1 I 1 C 0 s chlSab2.chr7 78988360 132 + 135778131 TATATAGCCATGAATATTATGTCATAGGTATGGGAGAAAATTGCC-AAAAACACACATTAGGCTGTTAAAAAC--------TGAGACCTGGAAATTGATGGATAGACATAGCAGAAGAGAGCAGAAGCAAGTCAAGAAATC i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012103277v1 2754979 132 - 3013352 TATATAGCCATGAATATTAAGTCATAGGTATGGGAGAAAATTGCC-AAAAACACACATTAGGCTGTTAAAAAC--------TGAGCCCTGGAAATTGATGGATAGGCATAGCAGAAGAGAGCAGAAGCAAGTCAAGCAATC i manLeu1.NW_012103277v1 I 1 C 0 s colAng1.NW_012114544v1 5986673 132 + 8656713 TATATAGCCATGAATATTAAGTCATAGGTATGGGAGAAAATTGCC-AAAAACATACATTAGGCTGTTAAAAAC--------TGAGCCCTGGAAATTGATGGATAGGCATAGAAGAAGAGAGCAGAAGCAAGTCAAAAAATC i colAng1.NW_012114544v1 I 1 C 0 s calJac3.chr3 129414947 140 - 190850796 CATGTGGCTATGAATATAAAGTCATAAGTATGTGAGGAAATTGCC-AAATACACACATTAGATTGTTAAAAACTGTTTATCTGAGCTCTGAGAACTGATGGGTAGGGATAGCAGAAGAGAGCAGAAATAATCCAAGAAATC i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6500432 140 - 25294431 TATGTGGCTATGAATATAAAGTCATAAGGATGTGAGGAAATTGCC-AAATACACACATTAGATTGTTAAAAACTGTTTATCTGAGCTCTGAGAACTGATGGGTAGGGATAGCAGAAAAGAGCAGAAATAATCGAAGGAATC i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4055322 140 - 6311556 TATGTTGCTATGAATATAAAGTCATAAGTATGTGGGGACATTGCC-AAATACACACATTAGATTGTTCAAAACTGCTTATCTGATCTCTGAGAACTGATGGGTAGGGATAGCAGAAGAGAGCAGAAATAATCCAAGAAATG i cebCap1.NW_016107420v1 I 366 C 0 s aotNan1.NW_018507635v1 14910906 140 + 15034901 TATGTGGCTATGAATATAAAGTCGTAAGTATGTGGGGAAATTGCC-AAATACACACATTAGATTGTTAAAAACTATTTATCTGAGCTCTGAGAACTGATGGGTAGGGATAGCAGAAGAGAGTAGAAATAATCCAAGAAATC i aotNan1.NW_018507635v1 I 1 C 0 s canFam3.chr19 44035493 124 - 53741614 --GGAAGATATGAATATTGGGTCATGAGTATGGATAAAAAGTGCCAAAATACACACATTAGGCTTTTAAGATT-GTTTACTTGAGTTCTGG-----------TGGGGAAAGTAGCCAAGAGCAGAAGCCAGCTAAGGA--- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1743600 710 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=7254031.000000 s hg38.chr9_KI270719v1_random 37934 830 + 176845 AAGGAAAAGATACTGCTATATAACAAGAAATAAAATAAAAGTACGTAATGTAATTCCCTTAGAAAATGAAGTCGGGTGACTGAGAAGATGTGGAGAACCTTTATACCAATTTC-CTTTTTCTAATCAGATTTGATTATAAAACATCGACATAAAATCAATATATGTGTATTATATTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-GCTGTCTTAAAGATCATGGATAACCCCATCTT------ATCTCAGTGTTCAATCTATAATTCATTAAA---AC--------AGTTTTC--AAAAGAATTTTCAAAATACTTTATTATGATTACAACCATACTTAATCTTAAATTAGGACATACTATGTGATAAATACTATGGTGAAGTACTTCTCAATAATCCATATTCTTAAACACAACAAGTTCTAGGATCAAACTGCTTAAATTTATATATTTGCTCAATCATTTGCCACATAAATATTTTACAGATGAAGAAACTAAAACAC-TT--TTTTTTTCTCCGAAACTGTTTCAGGGCTAAGTAACTTACTCATGAGCTTGGTAAAAATAAAAATTATTAGATACCTTGTGGATCCGTTGCATATATTTCAAATTTAAGTTTTTGAAGCA-CTTTTTGAAAAGACTTCTTTATGTGACATTTGTTCATTAAAAACACAGTGATTC---TTTTTTTGAAATACGATCCAATTGTAAAATATCCTGTGTCTAGAAATGAATTTATTTTCCTAACAAAAATGTATTA----AATTAATTAATTAAATTCTCAGAACCATTATTTAAA-CCAAGTTTGTTGATCCTACAACCAGTGAAAATAATCCCTACAATGCTAAAAATGTGTGTG s panTro5.chr4 135062700 836 + 194502333 AAGGAAAGGATACTGCTATATAACAAGAAATCAAATAAAAGTACGTAATGTAATTCCCTTAGAAAATGAAGTAGGGTGACTGAGAAGATGTGGAGAACCTTTATACCAATTTC-CTTTTTCTAATCAGATTTGATTATAAAACATTGACATAAAATCAATATATGTGTATTATATTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-GCGGTCTTAAAGATCATGGATAACTCCATCTT------ATCTCAATGTTCAATCTATAATTTATTAAA---AC------AGAGTTTTC--AAAAGAATTTTCAAAATACTTTATTATGATTACAACCATAGTTAATCTTAAATTAGGACATACTATGTGATAAATACTATGGTGAAGTACTTCTCAATAATCCATATTCTTAAACATAACAAGTTCTAGGATCAAACTGCTTAAATTTATATATTTGCTCAATCATTTGCCACATAAATATTTTACAGATGAAGAAACTAAAACACTTT--TTTTTTTCTCCAAAACCGTTTCAGGGCTAACTAACTTACTCATGAGCTTGGTAAAAATAAAAATCATTAGATACCTTGTGGATCCTTTGCATATATTTCAAATTTAAGTTTTTGAAGCA-CTTTTTGAGAAGACTTCTTTATGTGACATTTGTTCATTAAAAACACAGTGATTC----TTTTTTGAAATATGATCTAATTGTAAAATATCCTGTGTCTAGAAATGAATTTATTTTCCTAACAAAaatgaattaaaataattaattaattacattCTCAGAACCATTATGTAAA-CCAAGTGTGTTGATCCTACAACCAGTGAAAATAATCCCTACAATGCTAAAAATGTGTGTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 43254 833 - 70559 AAGGAAAGGATACTGCTATATAACAAGAAATAAAATAAAAGTACGTAATGTAATTCCCTTAGAAAATGAAGTAGGGTGACTGAGAAGATGTGGAGAACCTTTATACCAATTTC-CTTTTTCTAATCAGATTTGATTATAAAACATCGACATAAAATCAATATATGTGTATTATATTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-GCTGTCTTAAAGATCATGGATAACTCCATCTT------ATCTCAGTGTTCAATCTATAATTCATTAAA---AC--------AGTTTTC--AAAAGAATTTTCAAAATACTTTATTATGATTACAACCATACTTAATCTTAAATTAGGACATACTATGTGATAAATACTATGGTGAAGTACTTCTCAATAATCCATATTCTTAAACACAACAAGTTCTAGGATCAAACTGCTTAAATTTATATATTTGCTCAATCATTTGCCACATAAATATTTTACAGATGAAGAAACTAAAACAC-TT--TTTTTTTCTCCGAAACTGTTTCAGGGCTAACTAACTTACTCATGAGCTTGGTAAAAATAAAAATTATTAGATACCTTGTGGATCCGTTGCATATATTTCAAATTTAAGTTTTTGAAGCA-CTTTTTGAAAAGACTTCTTTATGTGACATTTGTTCATTAAAAACACAGTGATTC---TTTTTTTGAAATACGATCCAATTGTAAAATATCCTGTGTCTAGAAATGAATTTATTTTCCTAACAAAaatgaattaaattaattaattaatta-attCTCAGAACCATTATTTAAA-CCAAGTGTGTTGATCCTACAACCAGTGAAAATAATCCCTACAATGCTAAAAATGTGTGTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90456819 835 - 115148730 AAGGAAAGGATACTGCTATATAACACGAAATAAAATAAATGTACGTAATGTAATTCCCTTAGAAAATGAAGTAGGGTGACTGAGAAGATGTGGAGATCCTTTATACCAATTTC-CTTTTTCTAATCAGATTTGATTATAAAACATCAACATAAAATCAATACATTTGTATTATATTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-GCTGCCTTAAAGATCATGGATAACTCCATCTT------ATCTCAGTGTTCAATCTATAATTTATTAAA---AC------AGAGTTTTC--AAAAGAATTTTCAAAATACTTTATTCTGATTACAACCATCATTAATCTTAAATTAGGACATACTATGTGATAAATACTATGGTGAAGTACTTCTCAATAATCCATATTCTTAAACATAACAAGTTCTAGGATCAAACTGCTTAAGTTTATATATTTGCTCAATCATTTACCACATAAATATTTTACAGATGAAGAAACTAAAACAC-TT--TTTTTTTCTCCAAAACTGTTTCAGGGCTAACTAACTTACTCATGAGCTTGGTAAAAATAAAAATTATTAGATACCTTGTGGATCCGTTGCATATATTTCAAATTTAAGTTTTTGAAGCA-CTTCTTGAAAAGACTTCTTTATATGATGTTTGTTCATTAAAAACACAGTGATTC----TTTTTTGAAATACGATCCAATTTTAAAATATCCTGTGTCTAGAAATGAGTTCATTTTCCCAACAAAaatcaatttaattaattaattaattaaATTCTCAGAACCATTATTTAAA-CCAAGTGTGTTGATCCTACAACCAGTGAAAATAATCCCTACAATGCTAAAAATGTGTGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131399013 830 + 190429646 GAGGAAAGGATACTCCTATATAACAAGAAATAAAATAAAAGTACATAATGAAATTCCCTTAGAAAATGAAGTAGGGTGGCTGAGAAGATGTGGAGAACTTTTATACCAATTTC-CTTTTTCTAATCACATTTGATTATAAAAGATCGACATAAAATCAATATATGTGTATTATACTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-ACTGTCTTAAAGATCATGGATAACTCCATCTT------ATCTCAGTGTTCAATCTATAATTTATTAAA---AC------AGAGTTTTC--AAAAGAATTTTCAAAATACTTTATTATGATTACAACTATAGTTAATCTTAAATAAGGACATACTGTGTGATGAATACT-TGGTGAAGTACTTCTCAATAATCCATATTCTTAAAGGTAACAAGCTCTAGGATCAAACTGCTTAAGTTTATATATTTGCTCAATCATTTACCACATACATATTTTACAGATGAAGAAACTATAACAC-TTTGTTTTTTTCTCCAAAACTGTGTCAGGGCTAACTAACTTACTCATGAGCTTGGTAAAAATAAAAATTATTAGATACCTTGTGGATCCATTGTATATATTTAAAATTTAAG-TTTTGAAGCA-TTTTTTGAAAAGATTACTTTATGTGACATTTGTTCATTAAAAA-ACAGTGATTC----TTTTTTGAAATATGATTCAATTGTAAAATATCCTGTGTCTAGCAATGAATTTCTTTTCCTAACAAAaatgaattt----aattaattaattaaattaTCAGAGCCATTATTTAAA-CTAAGTGCGTTGATTGTACAACCAGTGAAAATAATACCTACAATGCTGAAAATTTGTATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130918021 830 + 189454096 GAGGAAAGGATACTCCTATATAACAAGAAATAAAATAAAAGTACATAATGAAATTCCCTTAGAAAATGAAGTAGGGTGGCTGAGAAGATGTGGAGAACTTTTATACCAATTTC-CTTTTTCTAATCACATTTGATTATAAAAGATCGACATAAAATCAATATATGTGTATTATACTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-ACTGTCTTAAAGATCATGGATAACTCCATCTT------ATCTCAGTGTTCAATCTATAATTTATTAAA---AC------AGAGTTTTC--AAAAGAATTTTCAAAATACTTTATTATGATTACAACTATAGTTAATCTTAAATAAGGACATACTGTGTGATGAATACT-TGGTGAAGTACTTCTCAATAATCCATATTCTTAAAGGTAACAAGCTCTAGGATCAAACTGCTTAAGTTTATATATTTGCTCAATCATTTACCACATACATATTTTACAGATGAAGAAACTATAACAC-TTTGTTTTTTTCTCCAAAACTGTGTCAGGGCTAACTAACTTACTCATGAGCTTGGTAAAAATAAAAATTATTAGATACCTTGTGGATCCATTGTATATATTTAAAATTTAAG-TTTTGAAGCA-TTTTTTGAAAAGATTACTTTATGTGACATTTGTTCATTAAAAA-ACAGTGATTC----TTTTTTGAAATATGATTCAATTGTAAAATATCCTGTGTCTAGCAATGAATTTCTTTTCCTAACAAAaatgaattt----aattaattaattaaattaTCAGAGCCATTATTTAAA-CTAAGTGCGTTGATTGTACAACCAGTGAAAATAATACCTACAATGCTGAAAATTTGTATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34909344 825 - 40319822 GAGGAAAGGATACTCCTATATAACAAGAAATAAAATAAAAGTACATAATGAAATTCCCTTAGAAAATGAAGCAGGGTGGCTGAGAAGATGTGGAGAACTTTTATACCAATTTC-CTTTTTCTAATCACATTTGATTATAAAAGATCGACATAAAATCAATATATGTGTATTATACTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-ACTGTCTTAAAGATCATGGGTAACTCCATCTT------ATCTCAGTGTTCAATCTATAATTTATTAAA---AC------AGAGTTTTC--AAAAGAATTTTCAAAATACTTTATTATGATTACAACTATAGTTAATCTTAAATAAGGACATACTGTGTGATGAATACT-TGGTGAAGTACTTCTCAATAATCCATATTCTTAAAGGTAACAAGCTCTAGGATCAAACTGCTTAAGTTTATATATTTGCTCAATCATTTACCACATACATATTTTACAGATGAAGAAACTATAACAC-TTTGTTTTTTTCTCCAAAACTGTGTCAGGGCTAACTAACTTACTCATGAGCTTGGTAAAAATAAAAATTATTAGATACCTTGTGGATCCATTGTATATATTTAAAATTTAAG-TTTTGAAGCA-TTTTTTGAAAAGA-----TTATGTGACATTTGTTCATTAAAAA-ACAGTGATTC----TTTTTTGAAATATGATTCAATTGTAAAATATCCTGTGTCTAGCAATGAATTTCTTTTCCTAACAAAaatgaattt----aattaattaattaaattaTCAGAGCCGTTATTTAAA-CCAAGTGTGTTGATTGTACAACCAGTGAAAATAATACCTACAATGCTGAAAATTTGTATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4463428 832 - 9219162 GAGGAAAGGATACTCCTATATAACAAGAAATAAAATAAAAGTACATAATGAAATTCCCTTAGAAAATGAAGTAGGGTGGCTGAGAAGATGTGGAGAACTTTTATACCAATTTC-CTTTTTCTAATCACATTTGATTATAAAAGATCGACATAAAATCAATATATGTGTATTATACTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-ACTGTCTTAAAGATCATGGATAACTCCATCTT------ATATCAGTGTTCAATCTATAATTTATTAAA---AC------AGAGTTTTC--AAAAGAATTTTCAAAATACTTGATTATGATTACAACTATAGTTAATCTTAAATAAGGACATACTGTGTGATGAATACT-TGGTGAAGTACTTCTCAATAATCCATATTCTTAAAGGTAACAAGCTCTAGGATCAAACTGCTTAAGTTTATATATTTGCTCAATCATTTACCACATACATATTTTACAGATGAAGAAAATATAACAC-TTTGTTTTTTTCTCCAAAACTGTGTCAGTGCTAACTAACTTACTCATGAGCTTGGTAAAAATAAAAATTATTAGATACCTTGTGGATCCATTGTATATATTTAAAATTTAAGTTTTTGAAACATTTTTTTGAAAAGATTACTTTATGTGACATTTGTTCATTAAAAA-ACAGTGATTC----TTTTTTGAAATATGATTCAATTGTAAAATATCCTGTGTCTAGAAATGAATTTATTTTCCTAACAAAaatgaattt----aattaattaattaaattaTCAGAGCCATTATTTAAA-CCAAGTGCATTGATTGTACAACCAGTGAAAATAATACCTACAATGCTGAAAATTTGTATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78988492 828 + 135778131 GAGGAAAGGATACTCCTATATAACAAGAAATAAAATAAAAGTACATAATGAAATTCCCTTAGAAAATGAAGTAGGGTGGCTGAGAAGATGTGGATAACTTTTATACCAATTTC-CTTTTTCTAATCACATTTGATTATAAAAGACTGATATAAAATCAATATATGTGTATTATACTCATC--TCAATTTTAATTTCAAGACCTAAT-TTT-GCTGTCTTAAAGATCATGGATAACTCCATCTT------ATCTCAGTGTTCAATCTATAATTTATTAAA---AC--------AGTTTTC--AAAAGAATTTTCAAAATACTTTATTATGATTACAACTATATTTAATCTTAAATAAAGACATACTATGTGATAAATACT-TGGTGAAGTACTTCTCAATAATCCATATTCTTAAAGATAACAAGCTCTAGTATCAGACTGCTTAAGTTTATATATTTGCTCAATCATTTACCACATACATATTTTACAGAAGAAGAAACTATAACAC-TTTGTTTTTTTCTCCAAAACTGGGTCAGGGCTACCTAACTTACTCATGAGCTTGGTAAAAAGAAAAATTATTAGATACATTGTGAATTCACTGTATATATTTCAAATTTAAGTTTTTGAAGCA-TTTTTTGAAAAGATTTCTTTATGTGACAATTGTTCATTAAAAA-A-AGTGATTC----TTCTTTGAAATATGATTCAATTGTAAAATATCCTGTGTCTAGAAATGAATTTATTTTCCTAACAAAaatgaattt----aattaattaattaaattaTCAGAGCCATTATTTAAA-CCAAGTGCACTGATCCTACAACCAGTGAAAATAATCCCTACAATGCTGAAAATTTGTGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2755111 826 - 3013352 GAGGAAAGGATACTCCTATATAACAAGAAATAAAATAAAAGTACATAATGAAATTCCCTTAGAAAATGAAGTAGGGTGGCTGAGAAGATGTGGAGAACTTTTATACCAATTTC-CTTTTTCTAATCACATTTGATTATAAAAGATCGACATAAAATCAATATATGTGTATTATACTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-ACTGTCTTAAAGATCATGGATAACTCCATCTT-----------AGTGTTCAATCTATAATTTATTAAA---AC------AGAGTTTTC--AAAAGAATTTTCAAAATACTTTATTATGATTACAACTATAGTTAATCTTAAATAAGGACATACTGTGTGATGAATACT-TGGTGAAGTACTTCTCAATAATCCATATTCTTAAAGGTAACAAGCTCTAGGATCAAACTGCTTAAGTTTATATATTTGCTCAATCATTTACCACATACATATTTTACAGATGAAGAAACTATAACAC-TTTGTTTTTTTCTCCAAAACTGTGTCAGGGCTAACTAACTTACTCATGAGCTTGGTAAAAATAAAAATTATTAGATACCTTGTGGATCCATTGTATATATTTAAAATTTAAGTTTTTGAAGCA-TTTTTTGAAAAGATTACTTTATGTGACATTTGTTCATTAAAAA-ACAGTGATTC----TTTTTTGAAATATGATTCAATTGTAAAATATCCTGTGTCTAGCAATGAATTTATTTTCCTAACAAAaatgaattt----aattaattaattaaattaTCAGAGCCATTATTTAAA-CCAAGTGCGTTGATTGTACAACCAGTGAAAATAATACCTACAATGCTGAAAATTTGTATA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5986805 820 + 8656713 GAGGAAAGGATACTCCTATATAACAAGAAATAAAATAAAAGTACATAATGAAATTCCCTTAGAAAATGAAGTAGAGTGGCTGAGAAGATGTGGAGAACTTTTATACCAATTTCATTTTTTCTAATCACATTTGATTATAAAAGACCAACATAAAATCAATATATGTGTATTATACTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-GCTGTCTTAAAGATCATGGATAACTCCATCTT------ATCTCATTGTTCAATCTATAATTTATTAAG---AC------AGAG--------------TTTTCAAAATACTTTCTTATGATTACAACCATAGTTAATCTTAAATAAGGACATAGTGTGTGATGAATACT-TGATGAAGTACTTCTCAATAATCCCTATTCTTAAAGATAACAAGCTCTAGGATCAAACTGCTTAAGTTTATATATTTGCTCAATCATTTACCACATACATATTTTACAGATGAAGAAACTATAACAC-TTTGTTTTTTTCTCCAAAACTGTGTCAGGGCTAACTAATTTACTCATGAGCTTGGTAAAAATAAAAATTATTAGATACCTTGTGGATCCATTGTATATATTTCAAATTTAAGTTTTTGAAGCA-TTTTTTGTAAAGATTTCTTTACGTGACAGTTGTTCATTAAAAA-ACAGTGATTC----TTTTTTGAAATATGATTCAATTGTAAAATATTCTGTGTCTAGAAATGAATTTATTTTCCTAACAAAaatgaattt----aattaattaattaaattaTCAGAGCCCTTATTTAAA-CCAAGTGCATTGATCCTACAACCAGTGAAAATAATAACTACAATGCTGAAAATTTGTGTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129415087 812 - 190850796 AAGGAAAGGCTACTGCTATATAACAAAAAATAAAATAAAAGTATGTCATGTAACTCCCTTAGAAAATGAAGTAGGATAACTGAGAAGATGTGGAGAATCTTTACATCAATTTC-CTTTTCCTAATCAAATGTGATTATAAAACATCAACATAAAATCAATATATGAGTATTATGCTCATT--TC------AATTTCAAGACCTAAT-TTT-GCTGTCTTAAAGATCAGAGATAACTCCATCTT------TTCTCAATGTTCAATTTATAATTTGTTAGA---AC--ATTTAGAGTTTTC--AAAAGAATTTTCAAAATACTCTATTATGATTACAACCATAGTTAATCTTAAATAAGATCATAATATGTGATAGATTCT-TGATAAAGTACTCCTCAGTATTTCATATTATTAAAGATAACAAGCCCTAGGATCAAACTGCTTAAACTTATATATTTGCTCAATCATTTACCACATAGATATTTTACAGAGGAAGAAACTAAAACAC---TG-ATTTTTCTGCAAAACTGTGTCAGGGCTGACTAACCTACTCATGAGCTTGATAAAAATAAAAAT---TAGCTACTTTGTGGATCAGTTGCACATATTTCAAATTAAAGTTTTTAAAGTA-CTTTTTGAAACATTTTCTTAATATGATATTTGCTGATTGAAA--ACA--GATTC--TTTTTTTTGAAACGTGATTCAATTGTAAAATATCCTGTGTCTAGAAATAAATTTATTTTCCTAACAAA-------------AATGAATTAATTAAATTTTCAGAGCCATTATTTAAA-GCAACTGTGTTGACCCTACAGCCCATG-AAATTATCCCTACAATGCTAAAAATTTGTGTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6500572 821 - 25294431 AAGGAAAGGCTACTGCTATATAACAAAAAATAAAATAAAAGTATGTCGTGTAACTCCCTTAGAAAATGAAGTAGGATAACTGAGAAGATGTGGAAAACCTTTACATCAATTTT-ATTTTCCAAATCAAATGTGATTATAAAACATCAACATAAAATCAATATACGAATATTGTGCTCATT--TCAATTTTAATTTCAAGACCTAAT-TTT-GCTGTCTTAAAGATCAGTGATAACTCCATCTT------ATCTCAGTGTTCAATCTATAATTTATTAAA---AC--ATTTAGAGTTATC--AAAAGAATTTTTAAAATACTCTATTATGATTACAACCATAGTTAATCCTAAATAAGATCATACTATATGATAGACACT-TGATAAAGTACTCATCAGTATTTCATATTCATAAAGAT---AAGCTTTAGGATCAAACTGCTTAAGTTTATATATTTGCTCAATCATTTACCACATGAATATTTTACAGATGAAGAAACTAAAACAC-TTTG-ATTTTTCTGCAAAACTGTGTCAGGGCTGACTAATTTACTCATGAGCTTGGTAAAAATAAAAATTACTAGATACCTTGTGAATCAGTTGCACATATTTCAAATGAAAGTGTTTGAAGTA-CTTTTTGAAAGAACTTCTTAATATGATATTTGCTGATTAAAA--ACAGTGATTC---TTTTTTTGAAACATGATTCAATTGTAAAATATCCTGTGTCTAGAAATAAGTTTATTTTCCTAACAAA-------------ACTAAATAAATTACATTTTCAGAGCCATTATTTAAG-GCAAATGTGTTCATCCTACAGCCCATG-AAATAATCCCTACAATGCTAAAAATTTGTGTG i saiBol1.JH378129 C 0 M 100 s cebCap1.NW_016107420v1 4055462 814 - 6311556 AAGGAAAGGCTAGTGTTATATAACAA-----GAAATAAAAGTAAATCATGTAACTCCCTTAGAAAATGAAGTAGGATAA-TGAGAAGATGTGGAGAGCCTTTACATCAATTTC-CTTTTCCTAATCAAATGTGATTCTAAAACATCAACATAAAATCAATATATGAGTATTATGCTCATT--TCAATCTTAATTTCAAGACCTAAT-TTT-GCTGTCTT-AAGATCAGGGATAACTCCATCTT------ATCTCAGTGTTCAATCTATAATTTATTAAA---AC--ATTTAGAGTTTTC--AAAAGAATTTTCAAAATATTCTATTATGATTACAACCATAGTTAATCCTAAATAAGATCATACTGTGTGATAGATACT-TGATAAAGTACTCCTcagtatttca------taaagataacaagctctaggatcaaactgctttagtttatatacctgctcaatcatttaccaCATGAATATTTTACAGATGAAGAAACTAAAACAC-TTTG-ATTTTTCTGCAAAACTGTGTCAGGGCTGACTAACTTACTCATGAGCTTGGTAAAAATAAAAATTACTAGATACCTTGTGGATCAGTTGCACATATTTCAAATGAAAGTTTTTGAAGTA-CTTTTTGAAATAATTTTTTAATATGATATTTGCTGATTTAAA--AGAGTGATTCTTTTTTTTTTGAAACATAATTCAATTGTAAAATATCCTGTGTCTAGAAATAAATTTATTTTCCTAACAAA-------------AATGAATTAATTAAATTTTCAGATCCATTGTTTAAA-GCAAGTGTGTTGATCCTACAGCCCATG-AAATAATCCCTACAAGGCTAAAAATTTGTGTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14911046 818 + 15034901 AAGGAAAGGCTACTGCCATATAACAA-----AAAATAAAACTATGTCATGTAACTCCCTTAGAAAATGAAGTAGGATAACTGAGAAGATGTGGAGAACCTTTACATCAATTTC-CTTTTCCTAATCATATGTGATTATAAAACATCAACATAAAATCAATATATGAGTATTATGCTCATT--TCAATTTTAATTTCAATACCTAAT-TTT-GCTGTCTTAAAGATCAGGGAAAACTCCATCTT------ATCTCAGTGTTTTATCTATAATTTATTAAA---AT--ATTTAGGGTTTTCAAAAAAGAATTTTCAAAATTCTCTATTATGATTACAACCATAGTTAATCTTAAATAAGATCATATGATGTGATAGATACT-TGATAAAGTACTCCTCAATAATCCATATTCTTAAAGATAACAAGCTCTAGGATCAAACTTATTAAGTTTATATATTTGCTCAGTCATTTACCACATGAATATTTTACAGATGAAGAAACTAAAACAC-TTTG-ATTTTTCTGCAAAACTGTGTCAGGGCTGACTAACTTACTCATGAGCTCAGTAAAAATAAAAATTACTACATACCTTGTGGCTCAGTTGCACATATTTTAAATGAAAGTTTTTGAAGTA-CGTTTTGAAAGAACTTCTTAAT---ATATTTGCTGATTAAAA--ACAGTGATTC---TTTTTTTGAAACATGATTCAATTGTAAAATATCCTGTGTCTAGAAATAAATTTATTTTCCTAACAAA-------------AATGAATTAATTAAATTTTCAGAGCCATTATTTAAA-GCAAGTGTGTTGATCCTACAGCCCATG-AAATAATCCCTACAATGCTAAAAATTTGTGCG i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44035617 798 - 53741614 TGGGAAGGAGTAGTGCTACATAAAAATAAA-AAAAGAAATGTATGTAAAGGGATTCCCTTAGAAGATGAAGTGGAATGACTAAGAAGACATGGAGCACTTTTATATTGATTTC-TTTTTCCTGATGAGATTTGATTTCCAGACTCCAAAATAGCATC---ATATAGGCATTATATTCCCTTATCAATCTTGATTTCAGGATTTAATGGCT-TTTGTCTTAAATACCAAAGATAATTCTATAAT------ATCTCAATGTTCATGCtataatttttaaaa---aaatatttaGGACTTTC--AAAAGAGTTTTTAAAACATTTTTTTAGGGTTATTACCCTAGATAACTTTAGGTAAAGTCATAC---ACGAGGAACACT-TCATTAAACACTTTTCAATAATCCATTCTCTTAAAAATGGCAAAC-CTGAGATCAAAC----TAAGTTTCTATTCTCATTCAGTCATTTACCATGTGAATCATTCACAGATGAGGAAATTAAGGCAT-TTTG-CATTTCCTGAAAAATGGAGATA---CTGATCCATTTATTTGTGGACTTG------ATAAACATTGTTAGAAACTTGGC--CTCAGCTGTACATATTTAAGATGAGATTTCTTGAAATA-CTCATGAAATAACTATTCTTTTATGATATCCATTAATAAAAAC-ATCTTGATTT----TTTTAAGA------ACTCATTTG-AAAATGTTCTGTATCCTGAAATGGGTTAAATCTCTTGATAA--------------AATTAAT--GTTAAATTCTCAGAATGACTATTTAAAGCTAAGTATGTTGATTCTAGAACCATAAAAAATAATCATTATATCATTAAAATTTTAGATG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1744310 781 + 5974691 aAGGAAAGAATATTATGATA-----------AAACTATAAATGTAAAATGTGATTCACTTAGCAAAGGAGGT-GATTGACTGAGGATACATGGAGCACCTTTACACCAATTTC-CTCTTCCCAATCTGACTTAATTTCTAATATCCAATTTAACATCCATTTA------------TTATA--TCAATCTTGATTT-AGGAGCTAAT-TAGAGATGTCTTACAGAT-AAAGACAGCCCTATCTTGTCTCAGTCTCAGTGTTCATGTTATAAATGATCAAACATAT------AGAATTTTA--AAAAG--TTTTCAAAATATTTTGTGATGGTTATAATCATAGTTAACTTTAATGAAGGCCAGTCTATATTATGGATTCT-GTGTTAAGCACTTCTTTATAATCCATGTTCAGAAAGAAGACAAGCTCTAGGATCAAACAGTCTGAGTTTATAAC----CTCACTCATTTAACAGGTGATcattttatagatgaggaaactaagacac-TTTA-TTTTTCATGCAAACCTGGTTTAGGGTTCA-----TTATTTACAGAATTG------ATAAAAATTGTTGGGTGCTTTGTGCCTTTCCTGTGCCCATTTAATATTATACTATTTGAATTG-C-TCTAAAAATAACTTTTTCAT--GATTTTTGTTAATGAAGTACAAAGTAATAT-GCATATTTTGAAACGTG-CTCATTTGTAAAATGATTTGTATATAGAAATAGGCTAACTTTTCAGATAAA-------------AATT-----ATCAAATTCTCAGAACCATTATTTAAA-AT-TGCCTGTTGATTCTAGAATCATCAGAAATAATCCTTACAATA-TATAAATGTTAATG i dasNov3.JH569232 I 710 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=463057.000000 s hg38.chr9_KI270719v1_random 38764 53 + 176845 CTATTATCCATCTATTTCCTAGTTCATTAAAG----------CCAAGTTATCATAATCTGGAC s panTro5.chr4 135063536 53 + 194502333 CTATTATCCATCTATTTCCTAGTTCATTAAAG----------CCAAGTTATCATAATCTGGAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 44087 53 - 70559 CTATTATCCATCTATTTCCTAGTTCATTAAAG----------CCAAGTTATCATAATCTGGAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90457654 53 - 115148730 CTATTATCCATCTATTTCCTAGTTCATTAAAG----------CCAAGTTATCATAATCTGGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131399843 53 + 190429646 CTATTATCCATTTCTTTCCTAGTTTATTAAAG----------CCAAGTTATCATAATCTGGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130918851 53 + 189454096 CTATTATCCATTTCTTTCCTAGTTTATTAAAG----------CCAAGTTATCATAATCTGGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34910169 53 - 40319822 CTATTATCCATTTCTTTCCTAGTTTATTAAAG----------CCAAGTTATCATAATCTGGAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4464260 53 - 9219162 CTATTATCCATTTCTTTCCTAGTTTATTAAAG----------CCAAGTTATCATAATCTGGAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78989320 53 + 135778131 CTATTATCCATTTCTTTCCTAGTTTATTAAAG----------CCAAGTTATCATAATCTGGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2755937 53 - 3013352 CTATTATCCATTTCTTTCCTAGTTTATTAAAG----------CCAAGTTATCATAATCTGGAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5987625 53 + 8656713 CTACTATCCATTTCTTTCCTAGTTTATTAAAG----------CCAAGTTATCATAATCTGGAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129415899 52 - 190850796 GTATTATCCATTTC-TTTCTAGTTTATGAAAG----------CCAAGTTATCATAATCTGGAC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4056276 52 - 6311556 GTATTATCCATTTC-TTCCTAGTTTATGAAAG----------CCAAGTTATCATAATCTGAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14911864 52 + 15034901 GTATTATCCATTTC-TTCCTAGTTTATGAAAG----------CCAAGTTATCATGATCTGGAC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44036415 53 - 53741614 CTATTACCCATTTCTTTTTTAATTTATTAAAG----------TCAAGTTTTCATAATCTGAAC i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1745091 62 + 5974691 TTATTACCCATTTATTTTCTTATTCATTAAAATAAAAGCATCCAAAATCATTA-AATCTTAAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I e saiBol1.JH378129 6501393 100 - 25294431 M a score=5444077.000000 s hg38.chr9_KI270719v1_random 38817 646 + 176845 TTTTTACCAAAGATTTTCAGGGATGTCAAAGGTTTTTACTCCTAAATTTAA-TA------TGCTGAAATATTA-CT-TTATGTTCTATTTA-TTTTT-TTCA-TTTAAAATAACATTTTTC--------------------------------------------------------------TCTATGTTGCGATTGCAAAAATTAACTTATTTACA-----------TATATACATGATGTCATGATATAATCTAGGCACAATTTTGGAT-------ATTTCCTT---------TTCCCAATCTGT--------------TTAACTTACACAGGTAATCA----ATATATGTAATCACCAAGCAAAAG-------------ACC----TTCATTGGTTTCTATTTTG--TTA-TTTTTTCCTCT-----GGAAAAGTGTTTAAGATAGTTTTAACATGAAGAATAGCGACCATATTTTTTGCATACTGTTATTTCTTCAAAGACGCTT------------AATCTATATAAAC----AAATTTTAAAAACCCTGGTATCAGTTGGGTAAAATCTCTGAGATTTAAAATATTTACTAAGCTACTAAatgttaagcaacacgggattttgagaaattggccaatg---gcaaggattgtaagggaacaaaa-acttggaaacaatgctgtttgtcgacatcttgaataatttgctgtgcctctattttatgtcacagta----------------------tttccacttccaggcctatacaaa----------taaataaaatcagtat---tatacacagaataggt----acacacac--------------acacaca s panTro5.chr4 135063589 641 + 194502333 TTTTTACCAAAGATTTTCAGAGATGTCAAAGGTTTTTACTCCTAAATTTAA-TA------TGCTGAAATATTA-CT-TTATGTTCTATTTA-TTTTTATTCA-TTTAAAATAACATTTTTC--------------------------------------------------------------TCTATGTTGCGATTGTAAAAATTAACTTATTTACA-----------TATAGACATGATGTCATGATATAATCTAGGCACAATTTTGGAT-------ATTTCCTT---------TTCCCAATGTGT--------------TTAACTTACACAGGTAATCA----ATATATGTAATCACCAAGCAAAAG-------------ACC----TTCATTGGTTTGTATTTTG--TTA-TTTTTTCCTCT-----GGAAAAGAGTTTAAGATAGTTTTATCATGAAGAATAGCAATCATATTTTTTGCATACTGTTATTTATTCAAAGACGCTT------------AATCTATATAAAC----AAATTTTAAAAACCCTGGTATCAGTTGGGTAAAATCTCTGAGATTTAAAATATTTACTAAGCTACTAAATGTTAAGCAACATGGGATTTTGAGAAATTGGCCAATG---GCAAGGCTTGTAAGGGAACAAAA-ACTTGGAAACAATGCTGTTTGTCGACATCTTGAATAATTTGCTGTGCCCCTATTTTATGTCACAGCA----------------------TTTCCACTTCCAGGCCTATACAAA----------TAAATAAAATCAGTGT---TATACACAGAATAGGT----------ac--------------acacaca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 44140 632 - 70559 TTTTTACCAAAGATTTTCAGGGATGTCAAAGGTTTTTACTCCTAAATTTAA-TA------TGCTGAAATATTA-CT-TTATGTTCTATTTA-TTTTTATTCA-TTTAAAATAACATTTTTC--------------------------------------------------------------TCTATGTTGCGATTGCAAAAATTAACTTATTTACA-----------TATATACATGATGTCATGATATAATCTAGGCACAATTTTGGAT-------ATTTCCTT---------TTCCCAATCTGT--------------TTAACTTACACAGGTAATCA----ATATATGTAATCACCAAGCAAAAG-------------ACC----TTCATTGGTTTCTATTTTG--TTA-TTTTTTCCTCT-----GGAAAAGAGTTTAAGATAGTTTTAACATGAAGAATAGCAACCATATTTTTTGCATACTGTTATTTCTTCAAAGACGCTT------------AATCTATATAAAC----AAATTTTAAAAACCCTGGTATCAGTTAGGTAAAATCTCTGAGATTTAAAATATTTACTAAGCTACTAAATGTTAAGCAACACGGGATTTTGAGAAATTGGCCAATG---GCAAGGATTGTAAGGGAACAAAA-ACTTGGAAACAATGCTGTTTGTCGACATCTTGAATAATTTGCTGTGCCTCTATTTTATGTCACAGTA----------------------TTTCCACTTCCAGGCCTATACAAA----------TAAATAAAATCAGTGT---TATACACAGAATAGGT--------------------------------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90457707 632 - 115148730 TTTTTACCAAAGATTTTCAGGGATGTCAAAGGTTTTTACTCCTAAATTTAA-TA------TGCTGAAATACTA-CT-TTATGTTCTATTTA-TTTTTATTCA-TTTAAAATAACATTTTTC--------------------------------------------------------------TCTATGTTGTGATTGCAAAACTTAACTTATTTACA-----------TATATACATGATGTCATGATATAATCTAGGCACAATTTTGGAT-------ATTTCCTT---------TTCCCAATGTGT--------------TTAACTTACACAGGTAATCA----ATATATGTAATCACCAAGCAAAAG-------------ACC----TTCACTGGTTTCTATTTTG--TTA-TTTTTTCCTCC-----GGAAAAGAGTTTAAGATAGTTTTAACATGAAGAAGAGCAACCATATTTTTTGCATACTGTTATTTCTTCAAAGATGCTT------------AATCTATATAAAC----AAATTTT-AAAACCCTGGTATCA----GGTAAAATCTCTGAGATTTAAAATATTTACTAAGCTACTAAatgttaagcaacatgggattttgagaaattggccaatg---gcaaggattgtaagggaacaaaa-acttggaaaccatgctgtttgtcgacatcttgaataatttgctgtgcctctattttatgtcacagca----------------------tttccacttccaggcctatacaaa----------taaataaaatcagtgt---tatacacagaataggt----------ac--------------aca---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131399896 642 + 190429646 TTTTTATCAAAGATTTTCAGGGATGTCTAAGGTTTTTACTTCTAAATTTAA-TA------TGTTGAAATATTT-TT-TTATGTTCTATTTACTTTTTATTCA-TTTAAAATAACG-TTTTC--------------------------------------------------------------TCTATGTTGCAATTGCAAAACTTAACATATTTACA-----------TATATACATGATGTCATGATATAATCTAGGTACAATTTTGGAT-------ATTTCCTT---------CTCCCAATGTAT--------------TTAACTTACACAGGTATTCA----ATATATGTAATAACCAAGCAAAAG-------------ACC----TTCACTGGCTTCTATT-----TTA-TTTTTTCCTCT-----GG-AAAGAGTTTAAGATAGTTTTAACATGAAGAAGAGCAACGATA-CTTTTGCATACTGTTATTTCTTCAAAGACACTTAAGGGAAGCAAAAATCTATATAAAC----AAATTTTTAAAACCCTGGTATCAGTTAGGTAGAATCTCTGAGATTTAAAATAATTACTAAGCTACTAAatgttaagcaacatgggattttgagaaattgtcaaatg---gcaaggattgtaagggaacaaaa-acttggaaacaatgttgtttgtcgatatcttgcataatttgctgtgcctctattttatgtcacagcg----------------------tttccacttccaggtctatacaaa----------taaataaaatcagtgt---tacacacagaataagt--------------------------aca---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130918904 640 + 189454096 TTTTTATCAAAGATTTTCAGGGATGTCTAAGGTTTTTACTTCTAAATTTAA-TA------TGTTGAAATATTT-TT-TTATGTTCTATTTACTTTTTATTCA-TTTAAAATAACA-TTTTC--------------------------------------------------------------TCTATGTTGCAATTGCAAAACTTAACATATTTACA-----------TATATACATGATGTCATGATATAATCTAGGTACAATTTTGGAT-------ATTTCCTT---------CTCCCAATGTAT--------------TTAACTTACACAGGTATTCA----ATATATGTAATAACCAAGCAAAAG-------------ACC----TTCACTGGCTTCTATT-----TTA-TTTTTTCCTCT-----GG-AAAGAGTTTAAGATAGTTTTAACATGAAGAAGAGCAACGATA-CTTTTGCATACTGTTATTTCTTCAAAGACACTTAAGGGAAGCAAAAATCTATATAAAC----AAATTTTTAAAACCCTGGTATCAGTTAGGTAGAATCTCTGAGATTTAAAATAATTACTAAGCTACTAAATGTTAAGCAACATGGGATTTTGAGAAATTGTCAAATG---GCAAggattgtaagggaacaaaa-acttggaaacaatgttgtttgtcgatatcttgcataatttgctgtgcctctattttatgtcacagcg----------------------tttccacttccaggtctatacaaa----------taaataaaatcagtgt---tacacacagaataagt----------------------------a---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34910222 638 - 40319822 TTTTTATCAAAGATTTACAGGGATGTCTAAGGTTTTTACTTCTAAATTTAA-TA------TGTTGAAAT-TTT-TT-TTATGTTCTATTTACTTTTTATTCA-TTTAAAATAACA-TTTTC--------------------------------------------------------------TCTATGTTGCAATTGCAAAACTTAACATATTTACA-----------TATATACATGATGTCATGATATAATCTAGGTACAATTTTGGAT-------ATTTCCTT---------CTCCCAATGTAT--------------TTAACTTACACAGGTATTCA----ATATATGTAATAACCAAGCAAAAG-------------ACC----TTCACTGGCTTCTATT-----TTA-TTTTTTCCTCT-----GG-AAAGAGTTTAAGATAGTTTTAACATGAAGAAGAGCAACGATA-TTTTTGCATACTGTTATTTCTTCAAAGACACTTAAGGGAAGAAAAAATCTATATAAAC----AAATTTTTAAAACCCTGGTATCAGTTAGGTAAAATCTCTGAGATTTAGAATAATTACTAAGCTACTAAATGTTAAGCAACATGGGATTTTGAGAAATTGTCAAATG---GCAAGGATTGTAAGGGAACGAAA-ACTTGGAAACAATGTTGTTTGTCGATATCTTGCATAATTTGCTGTGCCTCTATTTTATGTCACAGTG----------------------TTTCCACTTCCAGGTCTATACAAA----------TAAATAAAATCAGTGT---TACACACAGAATAAGT--------------------------------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4464313 643 - 9219162 TTTTTATCAAAGATTTTCAGGGATGTCTAAGGTTTTTACTTCTAAATTTAA-TA------TGTTGAAATATTA-TT-TTATGTTCTATTTACTTTTTATTCA-TTTAAAATAACA-TTTTC--------------------------------------------------------------TCTATGTTGCGATTGCAAAACTTAACATATTTACA-----------TATATACATGATGTCATGATATAATCTAGGTACAATTTTGGAT-------ATTTCCTT---------CTCCCAATGTAT--------------TTAACTTACACAGGTATTCA----ATATATGTAATAATCAAGCAAAAG-------------ACC----TTCATTGGCTTCTATT-----TTA-TTTTTTCCTCT-----GGAAAAGAGTTTAAGATAGTTTTAACATGAAGAAGAACAACGATA-CTTTTGCATACTGTTATTTCTTCAAAGACACTTAAGGGAAGCAAAAATCTATATAAAC----AAATTTTTAAAACCCTGGTATCAGTTAGGTAAAATCTCTGAGATTTAAAATAATTACTAAGCTACTAAatgttaagcaacatgggattttgagaaattgtcaaatg---gcaaggattgtaagggaacaaaa-acttggaaacaatgttgtttgtcgatatcttgcataatttgctgtgcctctattttatgtcacagcg----------------------tttccacttccaggtctatacaaa----------taaataaaatcagtgt---tacacacagaataagt--------------------------aca---- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78989373 645 + 135778131 TTTTTACCAAAGATTTTCAGGGATGTCTAAGGTTTTTACTTCTAAATTTAA-TA------GGTTGAAATATTATTT-TTTTGTTCTATTTACTTTTTATTCA-TTTAAAATAACA-TTTTC--------------------------------------------------------------TCTATGTTGCAATTGTAAAACTTAACATATTTACA-----------TATATACATGATGTCATGATATAATCTAGGTACAATTTTGGAT-------ATTTCCTT---------CTCCCAATGTAT--------------TTAACTTACACAGGTATTCA----GTATATGTAATCACCAAACAAAAG-------------ACC----TT-ACTGGCTTCTATT-----TTA-TTTTTTCCTCT-----GGAAAAGAGTTTAAGATAGTTTTAACCTGAAGAAGAGCAACGATA-CTTTTGCATACTGTTATTTCTTCAAAGACACTTAAGGGAAGCAAAAATCTATATAAAC----AAATTTTTAAAACCCTGGTATCAGTTAGGTAAAATATCTGAGATTTAAAATAATTACTAAGCTACTAAATGTTAAGCAACATGAGATTTTAAGAAATTGTCAAACG---ACAAggattgtaagggaacaaaa-acttggaaacaatgttgtttgtcgatatcttgcataatttgctgtgcctctattttatgtcacagca----------------------tttccacttccaggtctatacaaa----------taaataaaatcagtgt---tacacacagaataagt----------ac--------------aca---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2755990 655 - 3013352 TTTTTATCAAAGATTTTCAGGGATGTCTAAGGTTTTTACTTCTAAATTTAA-TA------TGTTGAAATATTA-TT-TTATGTTCTATTTACTTTTTATTCA-TTTAAAACAACA-TTTTC--------------------------------------------------------------TCTATGTTGCGATTGCAAAACTTAACATATTTACA-----------TATATACATGATGTCATGATATAATCTAGGTACAATTTTGGAT-------ATTTCCTT---------CTCCCAATGTAT--------------TTAACTTACACAGGTATTCA----ATATATGTAATAACCAAGCAAAAG-------------ACC----TTCACTGGCTTCTATT-----TTA-TTTTTTCCTCT-----GGAAAAGAGTTTAAGATAGTTTTAACATGAAGAAGAACAACGATA-CTTTTGCATACTGTTATTTCTTCAAAGACACTTAAGGGAAGCAAAAATCTATATAAAC----AAATTTTTAAAACCCTGGTATCAGTTAGGTAAAATCTCTGAGACTTAAAATAATTACTAAGCTACTAAatgttaagcaacatgggattttgagaaattgtcaaatg---gcaaggattgtaagggaacaaaa-acttggaaacaatgttgtttgtcgatatcttgcataatttgctatgcctctattttatgtcacagcg----------------------tttccacttccaggtctatacaaa----------taaataaaatcagtgt---tacacacagaataagtacacacacacac--------------aca---- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5987678 640 + 8656713 TTTTTACCTAAGATTTTCAGGGATGTCTAAGGTTTTTACTTCTAAATTTAA-TA------TGTTGAAATATTA-TT-TTATGTTCTATTTACTTTTTATTCA-TTTAAAATAACA-TTTTC--------------------------------------------------------------TCTATGTTGCGATTGCAAAAATTAACTTATTTACA-----------TATATACATGATGTCATGATATAATCTAGGTACAATTTTGTAT-------ATTTCCTT---------CTCCCAATGTAT--------------TTAACTTACACAGGTATTCA----ATATATGTAATCACCAAGCAAAAG-------------ACC----TTCACTGGCTTCTATT-----TTA-TTTTTTCCTCT-----GGACAAGAGTTTAAGATAGTTTTAACATGAAGAAGAGCAACAATA-CTTTTGCGTATTGTTATTTCTTCAAAGACACTTAAGGGAAGCAAAAATCTATATAAAC----AAATTTTTAAAACCCTGATATCAGTTAGGTAAAATCTCTGAAATTTAAAATAATTACTAAGCTACTAAATGTTAAGCAACATGAGATTTTGAGAAATTGTCAAATG---GCAAGAATTGTAAGGGAACAAAA-ACTTGGAAACAATGTTGTTTGTTGATATCTTGCATAATTTGCTGTGCCTCTATTTTATGTCACAGCA----------------------TTTCCACTTCCAGGTTTATACAAA----------TAAATAAAATCAGTGT---TACACACAGAATAAAT--------------------------------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129415951 637 - 190850796 ATTTCACCAAAGATTTTCAGGGATGTCTAAGATATTTACTTCTAAATTTAA-TA------TGAACCAAAATTG-tt-ttata-ttattttactttttattca-tttaaaataaCATTTTTC--------------------------------------------------------------TCTATGTTGAGATTGTAAAAATTAACTTCTTTACA-----------TATATACATAATGTCATGATATAATCTAGGTACAATTTTGGAT-------GTTTCCTT---------CTCTCAATTTAT--------------TTAACCTACGCAGGTATTCA----ATATATGTAATCACCAAGCAAAAG-------------ACC----TTTACTGGTTTCTACTTTG--TTA-TTTTTTCTTCT-----GGAAAACAGTTTAAGGTAGTTTCA--ATGAAAAAGAGCAAACATATCTTTTGCATACTGTTATTTCTTCAAAGTCACTTAGGGTAAGCAAGAATCTGTATAAAC----AAATTTTTAAAATCCAGGTATC----AGGTAAAATCATTGAGATTTAGAATAACCATTAAATTGCTAAATGTTAAGGAACACAGGATTTTGATAAACTGACAAATG---GCAAAGATTTTAAgggaacataa-acttgcaaacgctgctatttgtcgatgtcttgcataatttgttgtgcttctattttatgcctcagca----------------------tgtcctcttccacacccatacaaa----------taaataaaatcagtgt---tatacacaaagt------------------------------aca---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6501496 655 - 25294431 TTTTTACCAAAGATTTTCAGAGATGTCTAAGATATTTACTTCTAAATTTAA-TA------TGCCCCaaaatta-tt-ttgt--tatttttactttttattca-tttaaaataaCATTTTTC--------------------------------------------------------------TCTATGTTGAGATTGTAAAAATTAACTTATTTACA-----------TATATACATAATGTCATGATATAATCTAGGTACAGTTTTGGAT-------GTTTCCTT---------CTCTCAATGTAT--------------TTAACTTACACAGGTATTCA----ATATATGTAATCACCAAGCAAAAG-----------------------ACTGGTTTCTACTTTG--TTATTTTTTTCCTCT-----GGAAAACAGTTTAAGGTAGTTTCA--ATGAAAAAGAGCAACCATATCTTCTGCATACTGTTATTTCCTCAAAGACACTTAGGAAAAGCAAGAATCTATATAAAC----AATTTTTTAAAACCCAGGTGTCAGTTAGGTAAAATCATTGAGATTTAGAATAACTGCTAAATTACTAAATGTTAAGCAACACAGGATTTTGATAAACTGGCAAATA---GCAAAGATTGTAAGGGAACAAAA-ACTTGCAAACACTGCTATTTGTCAATGTCTTGTATAATTTGTTGTCCCTCTATTTTATGCCTCAGCA----------------------TGTCCTCTTCCAGGCCCATACAAA----------TAAATAAAATCAGTGT---TACACACAGAGTAAGT----------acacacaagcacacacaca---- i saiBol1.JH378129 M 100 C 0 s cebCap1.NW_016107420v1 4056328 659 - 6311556 TTTTTACCAAAGATTTTCAGGGATGTCTAAGATATGTACTTCTAAATTTAA-TA------TGCCCCAAAttta-tt-ttatgttatttttactttttattca-tttAAGATAACATTTTTC--------------------------------------------------------------TCTATGTTGATATTGTAAAAATTAACTTATTTACA-----------TATATACATAATGTCATGATATAATCTAGGTAAAATTTTGGAT-------GTTTCCTT---------CTCTCAATGGAT--------------TTAACTTATGCAGGTATTCA----ATATATGTAATCACCAAGCAAAAG-------------ACC----TTTATTGGTTTCTGCTTTG--TTA-TTTTTTCCTCT-----GGAAAACAGTTTAAGGTAGTTTCA--ATGAAAAAGAGCAACCATATCTTTTGCATACTGTTATTTCTTCAAAGACACTTAGGG-GAGCAAGAATCTATATAAAC----AAATTTTTAAAACCCAGGTATCAGTTAGGTAAAATCATTGAGATTTAGAATAACTACTAAATTACTAAATGTTAAGCAATACAGGATTTTGAGAAACTGGCAAATG---GCAAAGATTGTAAGGGAACAAAA-ACTTGCAAACACTGCTATTTGTTAATGTCTTGCATAATTTGTTGTGCCTCTATTTCATGCCTCAGCA----------------------TGTCCTCTTCCAAGACCATACAAA----------TAAATAAAATCAGTGT---TATACACAGAGTAAGT----------acacacacacacac--aca---- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14911916 647 + 15034901 TTTTTACCAAAGATTTTCAGGGATGTCTAAGATATGTACTTCTAAATTTAG-TA------TGCCCTAAAATTA-TT-TTGTGTTATTTTTACTTTTTATTCA-TTTAAAATAACATTTTTC--------------------------------------------------------------TCTATGTTGAGATTGTAAAAATTAACTTATTTACA-----------TATATACATAATGTCATGATATAATCTAGGTACAATTTTGGAT-------GTTTCTTT---------CTCTCAATGTAT--------------TTAACTTACACAGGCATTCA----ATATATGTAATCACCAA-CAAAAG-------------ACC----TTTACTGGTTTCTGCTTTG--TTA-TTTTTTCCTCT-----GGAAAACAGTTTAAGGTAGTTTCA--ATGAAAAAGAGCAACCATATCTTTTGCATACTGTTATTTCTTCCAAGACACTTAGGGGAAGCAAGAATCTGTATAAAC----AAATTTTTAAAACCCAGGTATGAGTTAGATAAAATAGTTGAGAATTAGAGTAACTACTAAATTACTAAATGTTAAGCAATACAGGATTTTGATAAACTGGCAAATG---GCAAAGATCGTAAGGGAACAAAA-ACTTGCTAACACTGCTATTTGTCGATGTCTTGCATAATTTGTTGTGCCTCCATTTTATGCCTCAGTA----------------------TGTCCTCTTCCAGGCCCATACAAA----------TAAATAAAAACAGTGT---TATATATAGAGTAAGT----------AT--------------Gca---- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44036468 646 - 53741614 TTTTTGCC-AAGATTATCAAGGTCTTGTAATTTTATCACTTCTGAATTCAAGTT------TTTTCAAATACTA-TTCTTATATAGCATTTGCTTTTCATGAATTTTAAAATAACA-TTTTT--------------------------------------------------------------TCTATATTGAAATTGTGATGATTAGCTTATTTCCATACTAAGCCTCTATTTTTCTGATGGTATAAAATGACTTTA---------------------ATTCTCTT---------CTCTCAATCATT--------------TTAATCTGTGCATGTAATCA----ATATCTGTAATCACTAAGCAAAAT-------------ACTAAGGTACTTTTGTTTCTATT-----TTG-TTTTTT-TTCA-----GTGAAACAGTTTATTATAATTTGAATATGAAGGAAACCAAATATATCTCTTGCATACTGTTATTTTTCAAAAGATGTTTAGAAGAAACAGGACTCTATATAGACATTAAAA-----AAAACCCAGATATCA----AGAACAATAGTTGAGGATTAAAATAA---------TGTTAAATAATAGGAAGCACAGGATTTTGGGAAATTGGCAAGTGTTAGCAAGAACTATAAGGGAAAAAAACCCTTTCAAACA---CTATTTGTCAATATCTTGCATACTTTACTGT--CTCTGTTTTATATCTCAGTATAAAATATGATATATAATTATGTCTCTACTTTTGGG----TATAAA----------TAAATACAATTTGTGT---TACACATATAATGAGT--------------------------------- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1745153 707 + 5974691 TTTTTAACAAATGTATTGAGAGATATCTAAGAT-TTTACTCCAGCAACTAA-TCAATTCTTTTTCAAATACTA-CT-TTATGTTGCATTTGCTTTTCTTTTT-TTTTAAATAACA-TCTTCTATGTGACCTATGTATCttttaaaaataaatttaaaatatacttaaaaataaaataatatCTTCTATACTAAGATTGTGACAATTAAAATATTTACA-----------CATATATGAGGTGTGATGATAGAATCTAGATACAATTTTAGATATGTGCAATTTTCTTAGCCGATACCTTTAAATGAATTTTATTACCTTTTATTATCTTTTCCCAATCTTTACCATATACATGTAATTAC--AGCAAAATGGGGGAGTTACATACC----TTTTTCCTATCCTACTGTGGTTTT-TTTTTTCCTTTTTTTGGCAAAGCCATTTATGATAGATTATATATGAATAA--------------------------------TTCATGAACAGCT-----------GAGTCTAAAGAGAC----AGGAG---AAAACCCAGGTATTAGGTGGGTTAAATAGTTGAGA-TTAACATAAT-----------TAAACGCTAGAGAGTACAGGATTATAGGAAATTGGCAAGTG---GCATGGCTTGTAAGTGAATAGAA-ACTCACAAACCCTGCTACTTTTCAGTATCTTGCAGGATTTACTA-GTTCCTGTTTTATATCTCTGCA----------------------TTTTTGTTT----GTTAATAAAAATATTCATGTTTATGGAGGATTAGTATacatatacataag--------------------------------------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=34239.000000 s hg38.chr9_KI270719v1_random 39463 4 + 176845 caca s panTro5.chr4 135064230 4 + 194502333 caca i panTro5.chr4 C 0 C 0 s ponAbe2.chrUn 4400550 4 + 72422247 TACA i ponAbe2.chrUn N 0 I 556 s nomLeu3.chr7b 90458339 4 - 115148730 caca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131400538 4 + 190429646 caca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130919544 4 + 189454096 caca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34910860 3 - 40319822 -ACA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4464956 4 - 9219162 caca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990018 4 + 135778131 caca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2756645 4 - 3013352 caca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988318 3 + 8656713 -ACA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129416588 4 - 190850796 caca i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502151 4 - 25294431 caca i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4056987 4 - 6311556 caca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14912563 4 + 15034901 caca i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1745860 4 + 5974691 gaga i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44037114 0 - 53741614 C e otoGar3.GL873702 937162 3301 - 3201129 I e gorGor5.CYUI01001450v1 44772 0 - 70559 C a score=687181.000000 s hg38.chr9_KI270719v1_random 39467 78 + 176845 cacacacacacacacacacaagcgttcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa s panTro5.chr4 135064234 78 + 194502333 cacacacacacacacacacaAGCGTTCAGGTGTATAGATTTCAACTGTAGCA-TCATTTGTAAT---AAACAATATTGGAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 44772 77 - 70559 -ACACAcacacacacacacaagcgttcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90458343 78 - 115148730 cacacacacacacacacacaagcattcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131400542 78 + 190429646 cacacacacacacacacacaagggttcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130919548 78 + 189454096 cacacacacacacacacacaagggttcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34910863 78 - 40319822 CACACAcacacacacacacaagggttcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4464960 78 - 9219162 cacacacacacacacacacaagggttcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990022 78 + 135778131 cacacacacacacacacacaagggttcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2756649 78 - 3013352 cacacacacacacacacacacgggttcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988321 78 + 8656713 CACACAcacacacacacacaagggttcagatataaagatttcaactgtagca-tcatttgtaat---aaacaatattggaaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129416592 81 - 190850796 cacacacacacacacacgtgcgagtacagatataaggatttcaactatgaca-tcatttgtaatcgcaaacaatattggaaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502155 81 - 25294431 cacacacacacacacacacacGAGTACGGATATAAGAATTTCAACTATAGCG-TCACTTGTAATCGCAAACAACATTGGAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4056991 67 - 6311556 cacacacacacacacacacacGAGTACAGATATAAG--------------CG-TCATTTGTAATCTCAAACAATATTGGAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14912567 81 + 15034901 cacacacacacacacacacacGAGTACGGATATAAGGATTTCAACTATAGTG-TCATTTGTAATTGCAAACAATATTGGAAA i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44037114 66 - 53741614 ---------------ACACAGGAGTATATTAATAAGAATTTCAATTATAACA-TTGCTTGTCATAGAAAATAATATTAGAgg i canFam3.chr19 C 0 I 462 s dasNov3.JH569232 1745864 55 + 5974691 --------------------------cagataca-ggacttaaactgtagcagttgtttgtagtagcaaggagtattagaaa i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4400554 556 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=524357.000000 s hg38.chr9_KI270719v1_random 39545 56 + 176845 caatgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata s panTro5.chr4 135064312 56 + 194502333 CAATGTTGGTATACATTGCTAAGAAAATGTGTTGAGATCAATTTAGTATAATTATA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 44849 56 - 70559 caatgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90458421 56 - 115148730 caacgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131400620 56 + 190429646 caatgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130919626 56 + 189454096 caatgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34910941 56 - 40319822 caatgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4465038 56 - 9219162 caatgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990100 56 + 135778131 caacgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2756727 56 - 3013352 caatgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988399 56 + 8656713 caatgttggtatatattgctaagaaaatgtgttgagatcaatttagtataattata i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129416673 55 - 190850796 caatgttggtatatattgctaagaaaa-atgttgagatcaatttactataattata i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502236 55 - 25294431 AAATGTTGGTATATATTGCTAAGAAAA-ATGTTGAGATCAATTTACTGTAATTACA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4057058 55 - 6311556 CAATGTTGGTATATATTGCTAAGAAAA-ATGTTGAGATCAATTTACTGTAATTATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14912648 55 + 15034901 CAATATTGGTATATATTGCTAAGAAAA-ATGTTGAGATCAATTTACTATAATTATA i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1745919 55 + 5974691 -taCATTAATATTTGTTTCTAGGAAAAACTTTCGGAATCAATTTTGTACAGTTATA i dasNov3.JH569232 C 0 I 5802 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4400554 556 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44037180 462 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=14343.000000 s hg38.chr9_KI270719v1_random 39601 2 + 176845 ta s panTro5.chr4 135064368 2 + 194502333 TA i panTro5.chr4 C 0 I 120 s gorGor5.CYUI01001450v1 44905 2 - 70559 ta i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90458477 2 - 115148730 ta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131400676 2 + 190429646 ca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130919682 2 + 189454096 ca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34910997 2 - 40319822 ca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4465094 2 - 9219162 ca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990156 2 + 135778131 ca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2756783 2 - 3013352 ca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988455 2 + 8656713 ca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129416728 2 - 190850796 ta i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502291 2 - 25294431 TA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4057113 2 - 6311556 TA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14912703 2 + 15034901 TA i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1751776 2 + 5974691 TA i dasNov3.JH569232 I 5802 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4400554 556 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44037180 462 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=37396.000000 s hg38.chr9_KI270719v1_random 39603 5 + 176845 atgag s gorGor5.CYUI01001450v1 44907 5 - 70559 atgag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90458479 5 - 115148730 acgaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131400678 5 + 190429646 gtgaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130919684 5 + 189454096 gtgaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34910999 5 - 40319822 gtgaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4465096 5 - 9219162 gtgaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990158 5 + 135778131 gtgaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2756785 5 - 3013352 gtgaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988457 5 + 8656713 atgaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129416730 5 - 190850796 atgaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502293 5 - 25294431 ATGAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4057115 5 - 6311556 ATGAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14912705 5 + 15034901 ATGAA i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1751778 5 + 5974691 ATGAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4400554 556 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44037180 462 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e panTro5.chr4 135064370 120 + 194502333 I a score=2156091.000000 s hg38.chr9_KI270719v1_random 39608 243 + 176845 ataTATGATTATT-TCATTTCTT--TATGGAATGAGTGTAATGGGAAAATCCAGTGGAAAGCTTACGTTAAAGCTAAGAAAGTTAAATCTTTAAGACCTTTCATATGTATGGGTCTTTCTCGGggtcatatgagttttgcaaaatttgctatgtaagatg-cttaattaaaaataagaaaagccac-acctgttttgactcccatttgcctttagtca-tttatctccctgtcaggtagtgcgggtcca s panTro5.chr4 135064490 243 + 194502333 ATATATGATTATT-TCATTTCTT--TATGGAATGAGTGTAATGGGAAAATCcagtggaaagtttacgttaaagctaagaaagttgaatctttaagacctttcatgtgtatgggtctttctcggggtcatatgaattttgcaaaatttgctctgtgagatg-tttaattaaaaataagaaaggccac-acctgttttgactcccatttgcctttagtca-tttatctccctgtcaggtagtgcaggtcca i panTro5.chr4 I 120 C 0 s gorGor5.CYUI01001450v1 44912 243 - 70559 ataTATGATTATT-TCATTTCTT--TATGGAATGAGTGTAATGGGAAAATCCAGTGGAAAGCttacgttaaagctaagaaagttaaatctttaagacctttcatgtgcatgggtctttctcggggtcatatgagttttgcaaaatttgctatgtaagatg-cttaattaaaaataagaaaagccac-acctgttttgactcccatttgcctttagtca-tttatctccctgtcaggtagtgcgagtcca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90458484 243 - 115148730 atatatgattatt-tcatttttt--tatggaatgaatgtaatgggaaaatCCAGTGGAAAGTTTACGTTAAAGCTAAGAAAGTTAAATCTTTAAGACCTTTCATGTGTATGGGTCTTTCTCGGggtcgtatgagttttgcaaaatttgctatgtaagatg-tttaattaaaaataagaaaggccac-acctgttttgactcccatttgcctttagtca-tttatctccctgtcaggtagtgcaggtcca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131400683 244 + 190429646 ataTATGATTATT-TAATTTCTT--TATGGAATGGGCATAATGGGAAAATCcagtggcaagtttaccttaaagctaagaaagttaaatctttaagacctttcacgtgtatgggtctttcttagggtcatatgagttttgcaaaatttgctatgtatgaggttttaattaaaaataataaaggccac-acctattttgactcccatttccctttagtca-tttatctccctattaggtagtgcgggtcca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130919689 244 + 189454096 ataTATGATTATT-TAATTTCTT--TATGGAATGGGCATAATGGGAAAATCcagtggcaagtttaccttaaagctaagaaagttaaatctttaagacctttcacgtgtatgggtctttcttagggtcatatgagttttgcaaaatttgctatgtatgaggttttaattaaaaataataaaggccac-acctattttgactcccatttccctttagtca-tttatctccctattaggtagtgcgggtcca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34911004 244 - 40319822 ataTATGATTATT-TAATTTCTT--TATGGAATGGGCATAATGGGAAAATCcagtggcaagtttaccttaaagctaagaaagttaaatctttaagacctttcacgtgtatgggtctttctcagggtcatatgagttttgcaaaatttgctatgtatgaggttttaattaaaaataataaaggccac-acctattttgactcccatttccctttagtca-tttatctccctattaggtagtgcgggtcca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4465101 244 - 9219162 ataTATGATTATT-TAATTTCTT--TATGGAATGGGCATAATGGGAAAATCcagtggcaagtttaccttaaagctaagaaagttaaatctttaagacctttcacgtgtatgggtctttctcagggtcatatgagttttgcaaaatttgctatgtacgaggttttaattaaaaataataaaggctac-acctattttgactcccatttccctttagtca-tttatctccctattaggtagtgcaggtcca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990163 244 + 135778131 ataTATGATTACT-TAATTTCTT--TATGGAATGGGCATAATGGGAAAATCcagtggcaagtttaccttaaagctaagaaagttaaatctttaagacctttcatgtgtatgggtctttcccagggtcatatgagttttgcaaaatttgctatgtatgaggttttaattaaaaataataaaggccac-acctattttgactcccatttccctttagtca-tttatctccctatcaggtagtgcgggtcca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2756790 244 - 3013352 ataTATGATTATT-TAATTTCTT--TATGAAATGGGCATAATGGGAAAATCcagtggcaagtttaccttaaagctaagaaagttaaatctttaagacctttcacgtgtatgggtctttctcagggtcatatgagttttggaaaatttgctatgtacgaggttttaattaaaaataataaaggccac-acctattttgactcccatttccctttagtca-tttatctccctattaggtagtgcgggtcca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988462 244 + 8656713 ataTATGATTATT-TAATTTCTT--TATGGAATAGGCATAATGGGAAAATCcagtggcaagtttaccttaaagctaagaaagttaaatctttaagacctttcatgtgtatgggtctttctcagggtcatatgagttttgcaaaatttgctatgtacaaggttttaattaaaaataataaagaccac-acctattttgactgccatttccctttaatca-ttgatctccctatcaggtagtgtgggtcca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129416735 244 - 190850796 ataTATGATTATT-TCATTTTTT--AATGAAATCAGTGTAATGGGAAAATCcagtagcaagtttattttaaagctaagaaagctaaatctttaagaactttcatttgtatgggtctttctcgaggtcatatgatttttgcaaaatttgctatgcaagatgttttaattaaaaataataagggccac-acctattttgactcccgtttgtctttagtag-tttatctccctatcaggtaatgtaggttca i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502298 246 - 25294431 ATATATGATTATT-TCATTTTTTTAAATGAAATCGTTATAATGGGAAAATCcagtagcaagtttactttaaagctaagaaagctaaatctttaagaactttcatttgtatgggtctttctcgaggtcatatgattactgcaaaatttgctatgtaagatgttttaattaaaaataataagggtcac-acctattttggctcccatttgcctttattca-tttatctccctaacaggtaatgcgggtcca i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4057120 245 - 6311556 ATATATGATTATT-TCATTTTTT-AAATGAAATCAGTGTAATGGGAAAATCcagtagcaagtttactttaaagctaagaaagctaaatctttaagaactttcatttgtatgggtctttctcggagtcatatgatttttgcaaaatttgctatgtaaggtgttttaattaaaaataataagggccac-acctattttgactgccacttgcctttagtca-tttatctccctaacaggtaatgcgggtcca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14912710 243 + 15034901 ATATATGATTATT-TCATTGTTT--TATGAAATCAGTTTAATGGGAAAATCCAGTAGTAAGTTTATTTTAAAGATAAGAAAGCTAAATCTTTAAGAACTTTCATTTGTATAGGTCTTTCTTGAggtcatatgatttttgcaaaatttgctatgtaagatgttttaattaaaaataataagggccac-acctattttgactcccatttgcc-ttagtca-tttatctccctatcaggtaatgcgggtcca i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1751783 243 + 5974691 CTATATAATCACTGCCACTTTTA--CCTGGAATGGTTGTCATGGGAGGATACAATTGCAGGTTTACCCTATGGCTAAGAAAGCTAAATC-TCATGGCCTCT--TGTTTCTGGGTCCTTCTTGtggtcatgtaa-ttttgcagagtttgctaagcaaaatgttttaactcaaagtaataaaaaacactgcttgtttccacttcaggatgccttcagttactttattctcttattggaaagttctggtcca i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4400554 556 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44037180 462 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=1815495.000000 s hg38.chr9_KI270719v1_random 39851 192 + 176845 gcctacaatacttttagtattcagctaaggggaagttgaa-ta--gagacatatttaatttcagttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-aaaatgaagttgtttctggcagttcagagactttctattgctcactccatagattcatccagtgttgtagcacagaggtgcagaggcag s panTro5.chr4 135064733 192 + 194502333 gcctacagcacttttagtattcagctaaggggaagttgac-ta--gagacatatttaatttcagttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-aaaatgaagttgtttctggcagttcagagactttctattgctcactccatagattcatccagtgtcgtagcacagaggtgcagaggcag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 45155 192 - 70559 gcctacagcacttttagtattcagctaaggggaagttgaa-ta--gagacatatttaatttcagttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-aaaatgaagttgtttctggcagttcagagactttctattgctcactccatagattcatccagtgtcgtagcacagaggtgcagaggcag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90458727 192 - 115148730 gcctacagcacttttagtattcagctaaggggaagttgaa-ta--gagacatatttaatttcagttca-ttgaggttaatgtgtttgatttaaagccgcttccatgt-aaaatgaagttgtttctggcagttcagagactttctattgctcattccataggttcatccagtgtcatagcacaaaggtgcagaggcag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131400927 192 + 190429646 gcctaaagcacttttactattcagctaaggggaagttgaa-ta--gaaacatatttaatttcggttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-aaaatgaagttatttctagcagttcagagtatttccactgctcgctccatagattcatccagtgtcatagcagaaagatgcagaggcag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130919933 192 + 189454096 gcctaaagcacttttagtattcagctaaggggaagttgaa-ta--gaaacatatttaatttcggttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-aaaatgaagttgtttctagcagttcagagtatttccactgctcgctccatagattcatccagtgtcagagcacaaagatgcagaggcag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34911248 192 - 40319822 gcctaaagcacttttagtattcagctaaggggaagttgaa-ta--gaaacatatttaatttcggttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-aaaatgaagttgtttctagcagttcagagtatttccactgctcgctccatagattcatccagtgtcagagcacaaagatgcagaggcag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4465345 192 - 9219162 gcctaaagcacttttagtattcagctaagaggaagttgaa-ta--gaaacatatttaatttcggttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-aagatgaagttgtttctagcagttcagagtacttccactgctcgctccatagattcatccagtgtcatagcagaaagatgcagaggcag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990407 192 + 135778131 gcctacagcacttttagtattcagctaaggggaagttgaa-ta--gaaacatatttaatttcagttca-ttgagattaatgcgtttgatttaaagccacttccatgt-aaaatgaagttgtttctagcagttcagagtatttccactgctcgctccatagattcatccagtgtcatagcacaaagacgcaggggcag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2757034 192 - 3013352 gcctaaagcacttttagtattcagctaaggggaagttgaa-ta--gaaacatatttaatttcggttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-aaaatgaagttgtttctagcagttcagagtatttccactgctcgctccatagattcatccagtgtcatagcagaaagatgcagaggcag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988706 192 + 8656713 gcctacagcacttttagtattcagctaaggggaagttgaa-ta--gaaacatatttaatttcggttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-aaaatgaagttgtttctagcagttcagagtatttccactgctcactccatagattcatccactgtcatagcacaaagatgcagaggcag i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129416979 191 - 190850796 gcctacaggacttttagtattcagctagggggaagttgaa-ta--aagacata-ttaatttctgttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-gaaatgaagttgtttctagcagttcagagtatttctaccactcacaccatagattcttccagtgtcatagcacaaaggtgcagaggcag i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502544 158 - 25294431 gcctacggcgcttttaatattcagctagggggaagttgaa-ta--aagacatatttaatttcggttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-gaaatgaagttgtttctggcagttcagagtacttctaccgctcacgccgTA----------------------------------GCAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4057365 192 - 6311556 gcctacagcagttttagtactcagctagggggaagttgaa-ta--aggacatatttaatttcggttca-ttgaggttaatgtgtttgatttaaagccacttccatgt-gaaatgaagttgtttctggcagttcatagtatttataccactcacactgtagattcaaccagtgtcacagcacaaaggtgcagaggcag i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14912953 192 + 15034901 gcctacagcacttttagtattcagctagggggaagttgaa-ta--aagacatatttaatttcggttca-ttgaggttaacatgtttgatttaaagccacttccatgt-gaaacgaagttgtttctagcagttcagagtatttctaccgctcgtgccgtagattcatccagtgtcatagcgcaaaggtgcagaggcag i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44037642 188 - 53741614 GCCAAAAACAATTTTTGAAATGAATTTAG-TACAGTTATA-TAATggaatacatttaatttgactttatttgaggtcaataggtctgatttagtgt--cttccatctaaaaattaagtcgtttctagcagtcaggagtgtttccactgctcactctggagatt-----ggtgtcaaaacacaaaggtgcagagtcac i canFam3.chr19 I 462 C 0 s dasNov3.JH569232 1752026 181 + 5974691 gactatgacattctttggatccagctaaggggaagttgagtta--gggatacatattatttgggcttc-------------tgtgtgatttgaagccacttccatgt-aaaattaagttatttctagcagtcaagctgtttactattacccactctgtggatttatgtggtgtcaaaacattaaggtgaagaatatg i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4400554 556 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=13923.000000 s hg38.chr9_KI270719v1_random 40043 1 + 176845 a s panTro5.chr4 135064925 1 + 194502333 a i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 45347 1 - 70559 a i gorGor5.CYUI01001450v1 C 0 C 0 s ponAbe2.chrUn 4401110 1 + 72422247 a i ponAbe2.chrUn I 556 I 2953 s nomLeu3.chr7b 90458919 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131401119 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130920125 1 + 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34911440 1 - 40319822 a i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4465537 1 - 9219162 a i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990599 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2757226 1 - 3013352 a i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988898 1 + 8656713 a i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129417170 1 - 190850796 a i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502702 1 - 25294431 A i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4057557 1 - 6311556 a i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14913145 1 + 15034901 a i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44037830 1 - 53741614 a i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1752207 1 + 5974691 a i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=124134.000000 s hg38.chr9_KI270719v1_random 40044 13 + 176845 gaatgttgtgaga s panTro5.chr4 135064926 13 + 194502333 gaatgttgtgaga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 45348 13 - 70559 gaatgttgtgaga i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90458920 13 - 115148730 gaatggtgtgaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131401120 13 + 190429646 gAATGCTGTGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130920126 13 + 189454096 gaatgctgtgaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34911441 13 - 40319822 gaatgctgtgaga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4465538 13 - 9219162 gaatgctgtgaga i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990600 13 + 135778131 gaatgctgtgaga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2757227 13 - 3013352 gaatgctatgaga i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988899 13 + 8656713 gaatgctgtgaga i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129417171 13 - 190850796 gaatgttgtgaga i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502703 11 - 25294431 GAATGT--TGAGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4057558 13 - 6311556 gaatgttgtgaga i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14913146 13 + 15034901 gaatgttgtgaga i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44037831 13 - 53741614 gatcgttctgaga i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1752208 13 + 5974691 gattttcttgaga i dasNov3.JH569232 C 0 I 2216 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=6078873.000000 s hg38.chr9_KI270719v1_random 40057 675 + 176845 ca----catgtcatgcagtacttggtaccag-aggctgcagagaagg-aaagaaacaGCTGCCCTTAACCTAgctctcctttccactaattcttaccgtggtggtgatgtggtgagaaccagatgtcc---ttcatgtaaggggatctgctgtaggcaaagaactctgg-aaaaaagaacctgagcg-tttttgtggaagagtgacccagttgctcttgacccccttctgagtgtgtctccatagtcaca-aaacggaaaaaaatctgagttcttactttaaccatttgg-ataaaaataaatctctctaggggaaagataacactagagtctccagctttgtaacttctgggatgcatctactgggtctcatcttctcttgaaatgtaaatatatatccctagtgaggtaAATCCCTCAGGATGGCCCCTAACCATGTTCTTTCTGTGAATTAATTTCCAGAGCTAGTTC--TTAGCGTAGAGCAGAAGTCTGAGTAAAATTTGTTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTTACAGCCTAACACTATCCATTAAAATCAACAAGAGAAAGACAAACTAATCCAAAATGACCCTgcaatcggggctc-taaaacaatgcaggttgactgt-aattgttaaaatgaatttggaaagtatttgaccttatctgttaaaattaagt s panTro5.chr4 135064939 674 + 194502333 ca----catgtcatgcagtacttggtaccag-aggctgcagagaagg-agagaaacaGCTGCCCTTAACCTAgctctcctttccactaattcttaccgtggtggtgatgtggtgagaaccagatgtcc---tacatgtaaggggatctgctgtaggcaaagaactctgg-aaaaaagaacctgagca-tttttgtggaagagtgacccagttgctct-gacccccttctgagtgtgtctccatagtcaca-aaacggaaaaaaatctgagttcttactctaaccatttgg-ataaaaataaatctctccaggggaaagataacactagagtctccagctttgtaacttctgggatgcatctactgggtctcatcttctcttgaaatgtaaatatatatccctagtgaggtaAATCCCTCAGGATGGCCCCTAACCATGTTCTTTCCGTGAATTAATTTCAAGAGCTAGTTC--TTAGTGTAGAGCCGAAGTCTGAGTAAAATTTGTTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTTACAGCCTAACACTATCCATTAAAATCAGTAAGAGAAAGACAAACTAATCCAAAATGACCCTgcaatcggggctc-taaaacaatgcagattgactgt-aattgttaaaatgaatttggaaagtatttgaccttatctgttaaaattaagt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 45361 673 - 70559 ca----catgtcatgcagtacttggtaccag-aggctgcagagaagg-aaagaaacaGCTGCCCTTAACCTAgctctcctttccactaattcttaccgtggtggtgatgtggtgagaaccagatgtcc---tacatgtaaggggatctgctgtaggcaaagaactctgg-aaaaaagaacctgagca-tttttgtggaagagtgacccagttgctct-gacccccttctgagtgtgtctccatagtcaca-aaacggaaaaaaatctgagttcttactctaaccatttgg-ataaaaataaatctctccaggggaaagataacactagagtctccagctttgtaacttctgggatgcatctact-ggtctcatcttctcttgaaatgtaaatatatatccctagtgaggtaaatccttcagGATGGCCCCTAACCATGTTCTTTCTGTGAATTAATTTCCAGAGCTAGTTC--TTAGCGTAGAGCAGAAGTCTGAGTAAAATTTGTTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTTACAGCCTAACACTATCCATTAAAATCAATAAGAGAAAGACAAACTAATCCAAAATGACCCTgcaatcggggctc-taaaacaatgcaggttgactgt-aattgttaaaatgaatttggaaagtatttgaccttatctgttaaaattaagt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90458933 674 - 115148730 ca----catgtcatgcagtacttgggaccag-aggctgcagagaagg-aaagaaacaGCTGCCCTTAACCTAgctctcctttccactagttcttactgtggtggtgatgtggtgagaaccagatgtcc---tacatgtaaggggatctgctgtaggcaaagaactccgg-aaaaaagaacgtgagca-tttttgtggaagagtgagccggttgctct-gacgcccttcttagtgtgtctccatagtcaca-aaacggaaaaaattctgagttcttactgtaaccattttg-ataaaaataaatctctccaagggaaagataacactagagtctccagctttgtaacttctgggatgcatctactgggtctcatcttctcttgaaatgtaaatatatatccctagtgaggtaAATCCCTCAGGATGGCCCCTAACCATGTTCTTTCTGTGAATTAATTTCCAGAGCTAGTTC--TTAGCATAGAGCCGAAGTTTGAGTAAAATTTGTTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATCTACAGCCTAACACTATCCATTAAAATCAATAAGAGAAAAACAAACTAATCCAAAATGACCCTgcaatcagggctc-taaaacaatgcaggttgactat-aattgttaaaatgaatttggaaagtatctgaccttatctgttaaaattaagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131401133 670 + 190429646 CG----CATGCCATGCAGTACTTGGTACCAG-AGGCTGTAGAGAAGG-AAATAAACAGCTACCCTTAACCAAgctctcctttcccctaattct----gcaacggtgatgtggtcagaaccagatgtcc---tacatgtaaggggatctgctgtaggcaaagaactgtag-aaaaaggagcctgagca-tttttgtggaagagtgacccagttgctct-gacccccttctgagtgtgtctccatagtcaca-aaatggaaaaaattctgagttcttactctaaccatttgg-ataaaaataaatgtctccaagggaaagataacagtagagtctccagctttgtaactactggcatgtatctactgggtctcatcttctcttgaaatgtaaatatatatccctagtgagataAATCCCTCAGGATGGCCCCTAACCATGTTCTTTCTGTGAATTAATTTCCAGGACTAGTTC--TTAGCACAGAGCCAAAGTTTGAGTAAAATTTGCTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTTACAGCCTAACATGACTCATTAAAATCAATAAGAGAAAGACAAACTAATCCAAAATGACCCTgcaatcaggactc-taaaacaatgctggttgactat-aattgttaaaatgaatttggaaagtatttgaccttatctgctaaaattaagt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130920139 670 + 189454096 cg----catgccatgcagtacttggtaccag-aggCTGTAGAGAAGG-AAATAAACAGCTACCCTTAACCAAgctctcctttcccctaattct----gcaacggtgatgtggtcagaaccagatgtcc---tacatgtaaggggatctgctgtaggcaaagaactgtag-aaaaaggagcctgagca-tttttgtggaagagtgacccagttgctct-gacccccttctgagtgtgtctccatagtcaca-aaatggaaaaaattctgagttcttactctaaccatttgg-ataaaaataaatgtctccaagggaaagataacagtagagtctccagctttgtaactactggcatgtatctactgggtctcatcttctcttgaaatgtaaatatatatccctagtgagataAATCCCTCAGGATGGCCCCTAACCATGTTCTTTCTGTGAATTAATTTCCAGGACTAGTTC--TTAGCACAGAGCCAAAGTTTGAGTAAAATTTGCTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTTACAGCCTAACATGACCCATTAAAATCAATAAGAGAAAGACAAACTAATCCAAAATGACCCTgcaatcaggactc-taaaacaatgctggttgactat-aattgttaaaatgaatttggaaagtatttgaccttatctgctaaaattaagt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34911454 671 - 40319822 cg----catgccatgcagtacttggtaccag-aggCTGTAGAGAAGG-AAATAAACAGCTACCCTTAACCAAgctctcctttcccctaattct----gcaacggtgatgtggtcagaaccagatgtcc---tacatgtaaggggatctgctgtaggcaaagaactgtag-aaaaaggagcctgagcattttttgtggaagagtgacccagttgctct-gacccccttctgagtgtgtctccatagtcaca-aaatggaaaaaattctgagttcttactctaaccatttgg-ataaaaataaatgtctccaagggaaagataacagtagagtctccagctttgtaactactggcatgtatctactgggtctcatcttctcttgaaatgtaaatatatatccctagtgagataAATCCCTCAGGATGGCCCCTAACCATGTTCTTTCTGTGAATTAATTTCCAGGACTAGTTC--TTAGCACAGAGCCAAAGTTTGAGTAAAATTTGCTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTTACAGCCTAACATGACCCATTAAAATCAATAAGAGAAAGACAAACTAATCCAAAATGACCCTgcaatcaggactc-taaaacaatgctggttgactat-aattgttaaaatgaatttggaaaatatttgaccttatctgctaaaattaagt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4465551 668 - 9219162 cg----catgccatgcagtacttggtaccag-aggCTGTAGAGAAGG-AAATAAACAGCTACCCTTAACCAAgctctcctttcccctaattct----gcaatggtgatgtggtcagaaccagatgtcc---tacatgtaaggggatctgctgtaggcaaagaactctgg-aaaaaggagcctgagca-tttttgtggaggagtgacccagttgctct-gacccccttctgagtgtgtctccatagtcaca-aaatggaaaaaattctgagttcttactctaaccatttgg-ataaaaataaatgtctccaagggaaagataacagtagagtctccagctttgtaactactggcatgtatctactgggtctcatcttctcttgaaatgtaaatatatatccctagtgagataAATCCCTCAGGATGGCCCCTAACCATGTTCTTTCTGTGAA--AATTTCCAGGACTAGTTC--TTAGCACAGAGCCAAAGTTGGAGTAAAATTTGCTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTTACAGCCTAACATGACCCATTAAAATCAATAAGAGAAAGACAAACTAATCCAAAATGACCCTgcaatcaggactc-taaaacaatgctggttgactat-aattgttaaaatgaatttggaaagtatttgaccttatctgctaaaattaagt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78990613 667 + 135778131 cg----catgccacgcagtacttggtaccag-aggCTGTAGAGAAGG-AAATAAACAGCTACCCTTAACCAAgctctcctttcccctaattct----gcagtggtgatgtggtgagaaccagatgtcg---tacatgtaaggggatctgctgtaggcaaagaactctag-aaaaaggagcctgagca-tttttgtggaagagtgacccagttgctct-gacccccttctgagtgtgtctccatagttac---aatggaaaaaattctgagttcttactctaaccatttgg-atgaaaataaatgtctccaaaggaaagataacagtagagtctccagctttgtgactactggcatgtatctactgggtctcatcttctcttgaaatgtaaatatatatccctagtgaggtaAATCCCTCAGGATAGCCCCTAAACATGTTCTTTCTGTGAATTAATTTCCAGGACTAGTTC--TTAGCACAGAGCCAAAGTTTGAGTAAAATTTGC-GAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTCACAGCCTAACATGACCCATTAAAATAAATAAAAGAAAGACAAACTAATCCAAAATGACCCTgcaatcaggactc-taaaacaatgctggttgactat-aattgttaaaatgaatttggaaagtatttgaccttatctgctaaaattaagt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2757240 670 - 3013352 tg----cctgccgtgcagtacttggtaccag-aggCTGTAGAGAAGG-AAATAAACGGCTACCCTTAACCAAgctctcctttcccctaattct----gcaatggtgatgtggtcagaaccagatgtcc---tacatgtaaggggatctgctgtaggcaaagaactctag-aaaaaggagcctgagca-tttttgtggaagagtgacccagttgctct-gacccccttctgagtgtgtctccatagtcaca-aaatggaaaaaattctgagttcttactctaaccatttgg-ataaaaataaatgtctccaagggaaagataacagtagagtctccaattttgtaactactggcatgtatctactgggtctcatcttctcttgaaatgtaaatatatatccctagtgagataAATCCCTCAGGATGGCCCCTAACCATGTTCTTTCTGTGAATTAATTTCCAGGACTAGTTC--TCAGCCCAGAGCCAAAGTTTGAGTAAAATTTGCTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTTACAGCCTAACATGACCCATTAAAATCAATAAGAGAAAGACAAACTAATCCAAAATGACCCTgcaatcaggactc-taaaacaatgctggttgactat-aattgttaaaatgaatttggaaagtatttgaccttatctgctaaaattaagt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5988912 670 + 8656713 tg----tatgccatgcagtacttggtaccag-aggctgtggagaagg-aaATAAACAGCTACCCTTAACCAAgctctcctttcccctaattct----gcaatggtgatgtgttgagaaccagatgtcc---tacatgtaaggggatctgctgtaggcaaagaactctag-aaaaaggagtctgagca-tttttgtggaagaatgacccagttgctct-gacccccttctgagtgtgtctccatagtcaca-aaatggaaaaaattctgagttcttactctaaccatttgg-ataaaaataaatctttccaagggaaagataacagtagagtctccagctttgtaacttctggcatgtatctactgagtctcatcttctctcgaaatgtaaatatatatccctagtgaggtaaatccctcagtATGGATCCTAACCATGTTCTTTCCGTGAATTAATTTCCAGGACTAGTTC--TTAGCAGAGAGCCAAAGTTTGAGTAAAATTTGCTGAGA------------------AAGTTCTTA----CTATGCATAAATAACTTTATTTACAGCCTAACATGACCCATTAAAATCAACAAGAGAAAGACAAACTAATCCCAAATGACCCTgcaattaggactc-taaaacaatgctggttgactat-aattgttgaaatgaatttggaaagtatttgaccttatctgttaaaattaagt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129417184 674 - 190850796 ca----catatcttgcagtacttggtagcag-aggctgtggaaaagggaaagaaataGCTACCCTTAACCTAActctcctttccactaattcttaccgcgatgatgatgtggtgagaaccagatgtcc---tacatgtaaggggatctgctataggcaaagaactctgg-aaaaaagaacctggtca-tttttgtgtaatagtgacccagttgctct-gacctccttctgagtgtgtctccatagtcaca-aaatggaaaaaattctgagttcttactctaataatttgg-ttaaaaacaaatctctccaagggaaagataacactagagtctctagctttgtaacttctgagatgtacctcctgagtctcattctgtcttgaaatgtaaataTATATCCCTAGTGAGCTAAATCCCTCAGGATGGTTCC-AACTATGTTCTTTCTGTGAATTCATTTCCAGAGCTAGTTC--TTAGCACAGAGCCAAAATTTGAATAAAACTTGTTCAGG------------------AATTTCTTA----CTGTACCTAAATAACTTTATTCACAGCCCAACATTacccattaaaatcaataagagaaagacaaactaatcccaaatgacccggcagtcagggctc-taaaacaatgctggttgactat-aattgttaaaatgaatttgaaaagtatttgaccttgtctgttaaaattaagt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6502714 673 - 25294431 TG----CATATCTTGCAGTACTTGGTACCAG-AGGCTGTGGAAAAGGGAAAGAAATAGCT-CCCTTAACCTAActctcctttccactaattcttaccacgatgatgatgtggtgagaaccagatgtcc---tacatgtaaggggatctgctgtaggcgaaggactctgg-aaaaaagaaactggcta-tttttgtggaagagtgacccagtggctct-aatccccttctgagtgtgtctccatagtcaca-aaatggaaaaaattctgcgttcttactctaataatttcg-ttaaaaataaatctctccaagggaaagataacactagagtctccagctttgtaacttctgagatgtacctactgagtcccattctgtcttgaaatgtaaataTATATCCCTAGTGAGCAAAGTCCCTCAGGATGGTCCC-AACTATGTTCTTTCTGTGAACGGATTTCCAGAGCTAGTTC--TTAGCACAATGCCAAAATTTGAGTAAAACTTGTTCAGA------------------AATTTCCTA----CTGTACATAAATAACTTTATTCACAGCCTAacactacccattaaaatcaataagagaaagacaaactaatcccaaatggccctgcagtcagggctc-taaaacaatgctggttgactat-aattgttaaaatgaatttggaaagtatttgaccttgtctgttaaaattaagt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4057571 668 - 6311556 cg----catatcttgcagtacttggtaccag-aggctgtggaaaaggaaaagaaGTAGCTACCCTTAACC-AActctcctttccactaatccttaccgcgatgatgatgtggtgagagccagatgttc---tacatgtaaggggatctgctgtaggcgaagaactctggaaaaaaagaacctggcca-tttttgtggaagagtgactcagttgctct-gacccccttctgagtgtgtctccacagtcacg-aaacagaaaaaattctgagttcttactctagtaatttgg-ttaaaaataaagctctcc------acgataacactagagtctccagctttgtaacttctgagatgtacctactgagtctcattctgccttgaaatgtaaatatacaTCCCTAGTGAGCTAAATCCCTCAGGATGGTCCC-AACTATGTTCTTCCTGTGAACTAATTTCCAGAGCTAGTTC--TTAGCGCAGAGACAAAATTTGAGTAAAGCTTGTTCAGA------------------AATTTCCTA----CTGTACATAAATAACTTTATTCACAGCCTAACACTACCCATTAAAATCAGTAAGAGAAAGACAAACTAATCCCAAATGACCCTGCAGACAGGGCTC-TAAAACAATGCTGGTTGACTAT-AATTGTTAAAATGAATTTGGAAAGTATTTGACCTTGTCTGTTAAAATTAAGT i cebCap1.NW_016107420v1 C 0 I 359 s aotNan1.NW_018507635v1 14913159 674 + 15034901 cg----catatcttgcagtgctaggtaccag-aggctgtggaaaagggaaagaaataGCTACCCTTAACCTAActctcctttccactaattcttaccgcgatgatgatatggtgagaatcagatgtcc---tacacgtaaggggatctgctgtaggcaaagaactctgg-aaaaaagaacctggcca-tttttgtggaagagtgacccagttgctct-gactcccttctgagtgtgtctccacagtcaca-aagtggaaaaaattctgagttcttactctaataatatgg-ttaaaaataaatctctccaagggaaagataacactagagtctccagctttgtaacttctgagatgtacctactgagcctcattctgtcttgaaatgtaaataTATATCCCTAGTGAGCTAAATCCCTCAGGATGATCCC-AACTATGTTCTTTCTGTGAATTGATTTCCAGAGCTAGTTC--TTAGCACAGAGCCAAAATTTGAGTAAAACTTGTTCAGA------------------AATTTCTTA----CTGTACGTAAATAACTGTACTCACAGCCTAACAATACCCATTAAAATCAATAAGAGAAAGATAAACTAATCCCAAATGACCCTgcagtcagggctc-taaaacaatgctggttgactat-aattgttaaaatgaatttggaaagtgtttgaccttgtctgttaaaattaagt i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44037844 706 - 53741614 tatgcccaaatcccgtggtgtttggcaccagaaggatatggagagcagagagaaaTGGCTGCCCTTTGCTTAgctcttgtttgccccagttcttac-cccatggtgacacaatgcaaatgagatttcattgtacggataaggggatctactagaggcaaggaaccctgg-aataaagaatctgggca-ttcatgtaaaagagtga-ccagctgctat-gaca-ccttctgagagagtttccatggtaacataactgggaacaattttgagttcttactccagttctttggaatgcaaataaatctctccaggggaaaactaagactagattttccagctgtacaaatcctgggatgtctctacagggtcttatcccctcccggaatgtaaacacacatccctagggaggtaaatctcAGAGGATAGTCTCTAATAATCTTCTCTCTCAGAATTAAATTC-AGGGCTTGTTCTTTTAGCCCAGATCCAAAGTTTTGGTAAAATTTGCTTAAGTGTCAAACAAAAATATTTAAATCCTTAAGTGTCAAACAAAAAT-ATTGTATCCACAACCTAAAAATATCCATATAAAACATTAAAAGAAAGGAAGACTATTCCAAAATGACCTTgcaactggagctcttcaaatgatgtggattgactataaattgctaaaactactttgtagaatatttgattctatctgttataactaaac i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=47012.000000 s hg38.chr9_KI270719v1_random 40732 5 + 176845 atatg s panTro5.chr4 135065613 5 + 194502333 atatg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46034 5 - 70559 atatg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459607 5 - 115148730 atatg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131401803 5 + 190429646 atatg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130920809 5 + 189454096 atatg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34912125 5 - 40319822 atatg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4466219 5 - 9219162 atatg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78991280 5 + 135778131 atatg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2757910 5 - 3013352 atatg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5989582 5 + 8656713 atatg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129417858 5 - 190850796 atatg i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6503387 5 - 25294431 gtatg i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14913833 5 + 15034901 atatg i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44038550 5 - 53741614 atatg i canFam3.chr19 C 0 I 3937 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I a score=1141327.000000 s hg38.chr9_KI270719v1_random 40737 152 + 176845 cataccctgtga-ccaataattctgctactatcatccaacaggaacacataaacatattcaggaaatgtacaaaattgtttattaaagaattattcacaacagctt-aaattggaagttttgcagttatccatcaagagtgaa----ataaacacatc s panTro5.chr4 135065618 152 + 194502333 catactatgtga-ccaataattctgctactatcatccaacaggaacacataaacatattcagcaaatgtacacaatggtttattaaagaattattcataacagctt-aaattggaagttttgcagttatccatcaagagtaaa----ataaacacatc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46039 152 - 70559 cataccctgtga-ccaataattctgctactatcatccaacaggaacacataaacatattcagcaaatgtacaaaattgtttattaaagaattattcacaacagctt-aaattggaagttttgcagttatccatcaagagtaaa----ataaacacatc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459612 153 - 115148730 cataccttatgacccaataattctgctactaccatccaacaggaacacataaacatattccgcaaatgtacaaaattgtttattaaagaattattcataacagctt-aaattggaagttttgcagttatccatcaagagtaaa----ataaacacatc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131401808 153 + 190429646 cataccctatgacccaataattctgctactatcatccaacatgaacacataaatatattcagcaaatgtacaaaattgtttattaaagaattattcataatggcta-aaattggaagttttgcagttatccatcaagagtaaa----ataaacacatc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130920814 153 + 189454096 cataccctatgacccaataattctgctactatcatccaacatgaacacataaatatattcagcaaatgtacaaaattgtttattaaagaattattcataatggcta-aaattggaagttttgcagttatccatcaagagtaaa----ataaacacatc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34912130 153 - 40319822 cataccctatgacccaataattctgctactatcatccaacatgaacacataaatatattcagcaaatgtacaaaattgtttattaaagaattattcataatggcta-aaattggaagttttgcagttatccatcaagagtaaa----ataaacacatc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4466224 153 - 9219162 cataccctatgacccaataattctgctactatcatccaacatgaacacataaatatattcagcaaatgtacaaaattgtttattaaagaattattcataatggctt-aacttggaagttttgcagttatccatcaagagtaaa----ataaacacatc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78991285 153 + 135778131 cataccctatgacccaataattctgctactgtcatccaacatgaacacataaatatattcagcaaatggacaaaattgtttattaaagaattattcataatggctt-aaattggaagttttgcagttatccatcaagagtaaa----ataaacacatc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2757915 153 - 3013352 cataccctatgacccaataattctgctactatcatccaacatgaacacataaatatattcagcaaatgtacaaaattgtttattaaagaattattcataatggctt-aaattggaagttttgtagttatccatcaagagcaaa----ataaacacatc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5989587 153 + 8656713 cataccctatgacccaataattctgctactatcatccaacaggaacacataaatatattcagcaaatgtacaaaattgtttattaaagaattattcataatggctt-aaattggaggttttgcagttatccatcaagagtaaa----ataaacacatc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129417863 158 - 190850796 cataccctatgacctgataattctgctactgtaatcccacaggaacacataaacatattcagcaaatgtacaaaattgtttattaaagaattgttcataatggcttcaaattggaaattttgcagttatccaccaagagtaaaatagataaacacatc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6503392 158 - 25294431 cataccctatgacctgaaaattctgctactataatcccacaggaacacataaacatattcagcaaatgtacaaaattgtttattaaagaatttttcatagtggcttcaaattggaagttttgcagttatccaccaaaagtaaaatagataaacacatC i saiBol1.JH378129 C 0 I 218 s aotNan1.NW_018507635v1 14913838 158 + 15034901 cataccctatgacctgataattctgctactataatcccacaggaacacataaacatattcagcaaatgtacaaaattatttattaaagaattattcatagtggcttcaaattggaagttttgcagttatccaccaagagtaaaatagataaacacatc i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I a score=38558.000000 s hg38.chr9_KI270719v1_random 40889 5 + 176845 atagc s panTro5.chr4 135065770 5 + 194502333 atagc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46191 5 - 70559 atagc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459765 5 - 115148730 atagc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131401961 5 + 190429646 atagc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130920967 5 + 189454096 atagc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34912283 5 - 40319822 atagc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4466377 5 - 9219162 atagc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78991438 5 + 135778131 atagc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2758068 5 - 3013352 atagc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5989740 5 + 8656713 atagc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129418021 5 - 190850796 atagc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6503768 5 - 25294431 atatt i saiBol1.JH378129 I 218 C 0 s aotNan1.NW_018507635v1 14913996 5 + 15034901 atagc i aotNan1.NW_018507635v1 C 0 I 197 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I a score=39819.000000 s hg38.chr9_KI270719v1_random 40894 5 + 176845 atata s panTro5.chr4 135065775 5 + 194502333 atata i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46196 5 - 70559 atata i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459770 5 - 115148730 atata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131401966 5 + 190429646 atata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130920972 5 + 189454096 atata i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34912288 5 - 40319822 atata i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4466382 5 - 9219162 atata i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78991443 5 + 135778131 atata i chlSab2.chr7 C 0 I 125 s manLeu1.NW_012103277v1 2758073 5 - 3013352 atata i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5989745 5 + 8656713 atata i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129418026 5 - 190850796 atatA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6503773 5 - 25294431 acata i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14914198 5 + 15034901 Atata i aotNan1.NW_018507635v1 I 197 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I a score=7098.000000 s hg38.chr9_KI270719v1_random 40899 1 + 176845 t s panTro5.chr4 135065780 1 + 194502333 t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46201 1 - 70559 t i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459775 1 - 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131401971 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130920977 1 + 189454096 t i macFas5.chr5 C 0 I 120 s macNem1.NW_012010911v1 34912293 1 - 40319822 t i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4466387 1 - 9219162 t i cerAty1.NW_012000798v1 C 0 C 0 s manLeu1.NW_012103277v1 2758078 1 - 3013352 t i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5989750 1 + 8656713 t i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129418031 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6503778 1 - 25294431 t i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14914203 1 + 15034901 t i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I e chlSab2.chr7 78991448 125 + 135778131 I a score=5634.000000 s hg38.chr9_KI270719v1_random 40900 1 + 176845 a s panTro5.chr4 135065781 1 + 194502333 a i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46202 1 - 70559 a i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459776 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131401972 1 + 190429646 a i rheMac8.chr5 C 0 I 123 s macFas5.chr5 130921098 1 + 189454096 a i macFas5.chr5 I 120 C 0 s macNem1.NW_012010911v1 34912294 1 - 40319822 a i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4466388 1 - 9219162 a i cerAty1.NW_012000798v1 C 0 C 0 s manLeu1.NW_012103277v1 2758079 1 - 3013352 a i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5989751 1 + 8656713 a i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129418032 1 - 190850796 G i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6503779 1 - 25294431 a i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14914204 1 + 15034901 a i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I e chlSab2.chr7 78991448 125 + 135778131 I a score=4664.000000 s hg38.chr9_KI270719v1_random 40901 1 + 176845 t s panTro5.chr4 135065782 1 + 194502333 c i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46203 1 - 70559 t i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459777 1 - 115148730 t i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130921099 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34912295 1 - 40319822 t i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4466389 1 - 9219162 t i cerAty1.NW_012000798v1 C 0 C 0 s manLeu1.NW_012103277v1 2758080 1 - 3013352 t i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5989752 1 + 8656713 t i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129418033 1 - 190850796 T i calJac3.chr3 C 0 I 187 s saiBol1.JH378129 6503780 1 - 25294431 t i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14914205 1 + 15034901 t i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I e chlSab2.chr7 78991448 125 + 135778131 I e rheMac8.chr5 131401973 123 + 190429646 I a score=6006.000000 s hg38.chr9_KI270719v1_random 40902 1 + 176845 a s panTro5.chr4 135065783 1 + 194502333 a i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46204 1 - 70559 a i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459778 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130921100 1 + 189454096 a i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34912296 1 - 40319822 a i macNem1.NW_012010911v1 C 0 I 121 s cerAty1.NW_012000798v1 4466390 1 - 9219162 a i cerAty1.NW_012000798v1 C 0 I 121 s manLeu1.NW_012103277v1 2758081 1 - 3013352 a i manLeu1.NW_012103277v1 C 0 I 3392 s colAng1.NW_012114544v1 5989753 1 + 8656713 a i colAng1.NW_012114544v1 C 0 I 1 s calJac3.chr3 129418221 1 - 190850796 a i calJac3.chr3 I 187 C 0 s saiBol1.JH378129 6503781 1 - 25294431 a i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14914206 1 + 15034901 a i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I e chlSab2.chr7 78991448 125 + 135778131 I e rheMac8.chr5 131401973 123 + 190429646 I a score=-417.000000 s hg38.chr9_KI270719v1_random 40903 1 + 176845 a s panTro5.chr4 135065784 1 + 194502333 c i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46205 1 - 70559 c i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459779 1 - 115148730 c i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 129418222 1 - 190850796 t i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6503782 1 - 25294431 t i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14914207 1 + 15034901 t i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I e colAng1.NW_012114544v1 5989754 1 + 8656713 I e manLeu1.NW_012103277v1 2758082 3392 - 3013352 I e chlSab2.chr7 78991448 125 + 135778131 I e cerAty1.NW_012000798v1 4466391 121 - 9219162 I e macNem1.NW_012010911v1 34912297 121 - 40319822 I e macFas5.chr5 130921101 1 + 189454096 I e rheMac8.chr5 131401973 123 + 190429646 I a score=28298.000000 s hg38.chr9_KI270719v1_random 40904 4 + 176845 atac s panTro5.chr4 135065785 4 + 194502333 atac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46206 4 - 70559 atac i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459780 4 - 115148730 atat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131402096 4 + 190429646 atat i rheMac8.chr5 I 123 C 0 s macFas5.chr5 130921102 4 + 189454096 atat i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34912418 4 - 40319822 atat i macNem1.NW_012010911v1 I 121 C 0 s cerAty1.NW_012000798v1 4466512 4 - 9219162 atat i cerAty1.NW_012000798v1 I 121 C 0 s chlSab2.chr7 78991573 4 + 135778131 atat i chlSab2.chr7 I 125 C 0 s manLeu1.NW_012103277v1 2761474 4 - 3013352 atat i manLeu1.NW_012103277v1 I 3392 C 0 s colAng1.NW_012114544v1 5989755 4 + 8656713 atac i colAng1.NW_012114544v1 I 1 I 102 s calJac3.chr3 129418223 4 - 190850796 atat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6503783 4 - 25294431 atat i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14914208 4 + 15034901 atat i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I e cebCap1.NW_016107420v1 4058239 359 - 6311556 I a score=7891755.000000 s hg38.chr9_KI270719v1_random 40908 958 + 176845 atggagtattatcaagcaagaaggataaatggtatacccaagagagctttgatgactctcccaaatacatttctgagta-----------agagaagccatccagaaaagaatatatattgtttaattctattataaaagttcaaaaataggtt-aaaaaa-gtctatgttattagcaatcagaataataattacTTGCAGATGGAGCAGATGGTAATTTAAGGGAATTTTATTGTGAAATATGTACAATCACTTTGTTAAAATTAATT-AACTATATACTATTTGTGTATTACAAT-AAAAATGTTTAATAAACTATCTCATCGTTGTTATTTACATTTCTTAAATAGCATTTAGGCATGGGTGAaaaggtttaacttgactggcatgaattgctcaaatactgtacattccaaagaggggtccctctgcaggactagaccttagtctaggagttcatctctgagcccttggagtattttgcttgataaaagtgttcttgttttcctgaagtcttgggccatactctcccagttcgaccagaaaaggttatgttatcaacgtgacttatgtgaacatctgtttttactctgggtgtaggaagaaagttgtgcttaaatgtcatggagctgaggtcaatcatatgggcattacatga----ctatgtgactgatcccagtaaacaccttcgacaactaggctccagcgagtgttcctggttggcaatgctttgcactttacatattgttgctgggataattaaacatgtccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctcctggagttcacttcatttgtcttttctcttagctgacttctatctgtactgtttttactgtaatatactgtaacaatgagtactacagcttctgattcccttagagatttccagtaaattaccaggtctcaagtggtcttgggaacccctggcat s panTro5.chr4 135065789 957 + 194502333 atggagtattatcatgcaagaaggataaatggtatacccaagagagctttgatgactctcccaaatacatttctgagta-----------agagaagccatccagaaaagaatatatattgtttaattctattataaaagttcaaaaataggtttaaaaaa-gtct--gttattagcaatcagaataataattacTTGCAGATGGAGCAGATGGTAATTTAAGGGAATTTTATTGTGAAATATGTACAATCACTTTGTTAAAATTAATT-AACTATATACTATTTGTGTATTTCAAT-AAAAACGTTTAATAAACTATCTCATCGTTGTTATTTACATTTCTTAAATAGCATTTAGGCATGGGTGAaaaggtttaacttgactggcctgaattgctcaaatactgtacattccaaagaggggtccctctgcaggactagaccttagtctaggagttcatctctgagcccttggagtattttgcttgataaaagtgttcttgttttcctgaagtcttgggccatactctcccagttcgaccagaaaaggttatgttatcaacgtgacttatgtgaacatctgtttttactctgggtgtaggaagaaagttgtgctgaaatgtcatggagctgaggtcaatcatatgggcattacatga----ctatgtgactgatcccagtaaacaccttcgacaactaggctccagcgagtgttcctagttggcgatgctttgcactttacatattgttgctgggataattaaacatgtccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctcctggagttcacttcatttgtcttttctcttagctgacctctatctgtactgtttttactgtaatatactgtaacaatgagtacaacagcttctgattcccttagagacttccaataaattaccaggtctcaagtggtcttgggaacccctggcat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 46210 954 - 70559 atggagtattatcaagcaagaaggataaatggtatacccaagagagctttgatgactctcccaaatacatttctgagta-----------agagaagccatccagaaaagaatatatattgtttaattctattataaaagttcaaaaataggttaaaaaaa-gtctatgttattagcaatcagaataataattacTTGCAGATGGAGCAGATGGTAATTTAAGGGAATTTTATTGTGAAATATGTACAATCACTTTGTTAAAA-TAATT-AACTATATACTATTTGTGTATTTCAAT-AAAAATGTTTAATAAACTATCTC-TCGTTGTTATTTACATTTCTTAAATAGCATTTAGGCATGGGTGAaaaggtttaacttgactggcctgaattgct-aaatact-tacattccaaagaggggtccctctgcaggactagaccttagtctaggagttcatctctgagcccttggagtattttgcttgataaaagtgttcttgttttcctgaagtcttgggccatactctcccagttcgaccagaaaaggttatgttatcaa-gtgacttatgtgaacatctgtttttactctgggtgtaggaagaaagttgtgcttgaatgtcatggagctgaggtcaatcatatgggcattacatga----ctatgtgactgatcccagtaaacaccttcgacaactaggctccagcgagtgttcctggttggcaatgctttgcactttacatattgttgctgggataattaaacatgtccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctcctggagttcacttcatttgtcttttctcttagctgacttctatctgtactgtttttactgtaatatactgtaacaatgagtactacagcttctgattcccttagagacttccaataaattaccaggtctcaagtggtcttgggaacccctggcat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90459784 957 - 115148730 atggagtattatcaagcaagaaggataaatggtatacccaagagagcttag-tgactctcccaaatgcatttctgagta-----------agagaagccatccagaaaagaatatgtattgtttaattctattataaaagttcaaaaatagatttaaaaag--tccatgttattagcaatcagaataataattacTTGCAGATGGAGCAGATGGTAATTTAAGGGAATTTTATTGTGAAATATGTACAATCACTTTGTTAAAATTAATT-AACTATATACTATTTGTGTATTTCAAT-AAAAACATTTAATAAACTATCTCGTCGTTGTTATTTACATTTCTTAAATAGCATTTAGGCATGGGTGAaaaggtttaacttgactggcctgaattgctcaaatactgtacattccaaagaggggtccctctgcagggctagaccttagtctcggagttcatctctgagcccttggagtattttgcttgattaaagtgttcttgttttcctgaagtcttgggccatactctcccagttcgaccagacaaggttgtgttctcaacgtgacttatgtgaacatctgtttttactctgggtgtaggaagaaagttgtgctgaaatgtcatggagctgaggtcaatcatatgggcattacatga----ctatgtgactgatcccagtaaacaccttcgacaactaggctccagcgagtgttcttggttggcaatgctgtgcactttacatattgttgctgggataattaaacatgtccccatgcaactgctctgggagaggacacctgagagcttggacttggtttctcctggagttcacttcatttgtcttttctcttagctgacctctatctgtactgtttttactgtaatatactgtaacaatgagtacaacagcttctgattcccttagagacttccaataaattaccaggtctcaagtggtcttgggaacccctggcat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131402100 957 + 190429646 atggagtattatccagcaagaaagataaatggtatacccaagagacctttgatgactctcccaaatacacttttgagta-----------agagaagccatccagaaaagagtatatattgtttaattctatcataaaagttcaaaaataggtt--aaaaa-gtatatgttattagcaatcagaataatagctacTTGCATATGAAGCAGATGGCAATTTAAGGGAATTTGACTGTGAAATATGTACAATCACTTTGTTACAATTAATT-AACTGTGTACTACTTCTATATTTCAAT-AAAAACATTTAATAAACTATCTTGTCATTGCTATTTACATTTCTTACATAGTATTTAGGAATGGATGAaaaggtttaacctgactagcctgaattgctcaaatactgtacatttcaaagaggggtccctctgcaggactagaccttagtctaggggttcatctctgagcccttggagtattttgcttgataaaagtgttcttgtattcctgaagtcttgggccatactctcccagttcgaccagacaaggttatgttatcaacgtgacttatgtgaacacctgtttttactctgggtgtaggaagaaagttgtgctgaaatgtcatggagccgaggtcaatcatatgggcgttacatga----ctacgtgactgatcccagtaaacaccttggacaactaggctccagcgagttttcctggttgtcaacactttgcactttacacattgttgctgggataattaaacacgtccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctactggagttcacttcatttgtcttttctcttagctgacttctctctgtactgttttcactataataaactataacaatgagtacaacagcttctgatttccttagatacttctgacaaattaccaggtctcaagtggtcttgggaacccctggcat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130921106 957 + 189454096 atggagtattatccagcaagaaagataaatggtatacccaagagacctttgatgactctcccaaatacacttttgagta-----------agagaagccatccagaaaagagtatatattgtttaattctatcataaaagttcaaaaataggtt--aaaaa-gtatatgttattagcaatcagaataatagctacTTGCATATGAAGCAGATGGCAATTTAAGGGAATTTGACTGTGAAATATGTACAATCACTTTGTTACAATTAATT-AACTGTGTACTACTTCTATATTTCAAT-AAAAACATTTAATAAACTATCTTGTCATTGCTATTTACATTTCTTACATAGTATTTAGGAATGGATGAaaaggtttaacctgactagcctgaattgctcaaatactgtacatttcaaagaggggtccctctgcaggactagaccttagtctaggggttcatctctgagcccttggagtattttgcttgataaaagtgttcttgtattcctgaagtcttgggccatactctcccagttcgaccagacaaggttatgttatcaacgtgacttatgtgaacacctgtttttactctgggtgtaggaagaaagttgtgctgaaatgtcatggagccgaggtcaatcatatgggcgttacatga----ctacgtgactgatcccagtaaacaccttggacaactaggctccagcgagttttcctggttgtcaacactttgcactttacacattgttgctgggataattaaacacgtccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctactggagttcacttcatttgtcttttctcttagctgacttctctctgtactgttttcactataataaactataacaatgagtacaacagcttctgatttccttagatacttctaacaaattaccaggtctcaagtggtcttgggaacccctggcat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34912422 957 - 40319822 atggagtattatccaggaagaaagataaatggtatacccaagagacctttgatgactctcccaaatacacttttgagta-----------agagaagccatccagaaaagagtatatattgtttaattctatcataagagttcaaaaataggtt--aaaaa-gtatatgttattagcaatcagaataatagctacTTGCATATGAAGCAGATGGCAATTTAAGGGAATTTGACTGTGAAATATGTACAATCACTTTGTTACAATTAATT-AACTGTGTACTACTTCTGTATTTCAAT-AAAAACATTTAATAAACTATCTTGTCATTGCTATTTACATTTCTTACATAGTATTTAGGAATGGATGAaaaggtttaacctgactagcctgaattgctcaaatactgtacatttcaaagaggggtccctctgcaggactagaccttagtctaggagttcatctctgagcccttggagtattttgcttgataaaagtgttcttgtattcctgaagtcttgggccatactctcccagttcgaccagacaaggttatgttatcaacgtgacttatgtgaacacctgtttttactctgggtgtaggaagaaagttgtgctgaaatgtcatggagccgaggtcaatcatatgggcgttacatga----ctacatgactgatcccagtaaacaccttggacaactaggctccagcgagttttcctggttgtcaacactttgcactttacacattgttgctgggataattaaacacgtccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctactggagttcacttcatttgtcttttctcttagctgacttctctctgtactgttttcactataataaactataacaatgagtacaacagcttctgatttccttagatacttctaacaaattaccaggtctcaagtggtcttgggaacccctggcat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4466516 958 - 9219162 atggagtattatccagcaagaaagataaatggtatacccaagagacctttgatgactctcccaaatacacttttgagta-----------agagaagccatccagaaaagagtatatattgtttaattctatcataaaagttcaaaaataggtt-aaaaaa-gtatattttattagcaatcagaataatagctacTTGCAGATGAAGCAGATGGCAATTTAAGGGAATTTGACTGTGAAAGATGTGCAATCACTTTGTTAAAATTAATT-AACTGTGTACTACTTCTATATTTCAAT-AAAAACATTTAATAAACTATCTTGCCATTGCTATTTACATTTCTTACATAGTATTTAGGAATGAATGAaaaggtttaacctgactagcctgaattgctcaaatactgtacatttcaaagaggggtccctctgcaggactagaccttagtctaggggttcatctctgagcccttggagtattttgcttgataaaaatgttcttgtattcctgaagtcttgggccatactctcccagttcgaccagacaaggttatgttatcaacgtgacttatgtgaacacctgtttttactctgggtgtaggaagaaagttgtgctgaaatgtcatggagccgaggtcaatcatatgggcgttacagga----ctacgtgactgatcccagtaaacaccttggacaactaggctccagcgagttttcctggttgtcaacgctttgcactttacacattgttgctgggataattaaacacgtccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctactggagttcacttcatttgtcttttctcttagctgacttctctctgtattgttttcactataataaactataacaatgagtacaacagcttctgatttccttagatacttctaataaattaccaggtctcaagtggtcttgggaacccctggcat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78991577 957 + 135778131 atggagtattatccagcaagaaagataaatggtatacccaagagaccttcgatgactctcccaaatacacttttgagta-----------agagaagccatccagaaaagagtgtatattgtttaattctatcataaaagttcaaaaataggtt-aaaaaa-gtatatgttattagcaatcagaataatagctacTTGCAGATGAAGCAGATGGCAATTTAAGGGAATTTGATTGTGAAATATGTACAATCACTTTGTTAAAATTAATT-AACTGTGTACTACTTCTATATTTCAAT-AAAAACATTTAATAAACTATCTTGTCATTGCTATTTACATTTCTTACATAGTATTTAGGAATGGATGAaaaggtttaacctgactagcctgaattgctcaaatac-gtacatttcaaagaggggtccctctgcaggactagaccttagtctaggggttcatctctgagcccttggagtattttgcttgataaaagtgttcttgtattcctgaagtcttgggctatactctcccagttctaccagacaaggttatgttatcaacgtgacttatgtgaacacctgtttttactctgggtgtaggaagaaagttgtactgaaatgtcatggagccgaggtcaatcatatgggcgttacatga----ctacgtgactgatcgcagtaaacaccttggacaactaggctccagcgagttttcctggttgtcaacgctttgcactttacacattgttgctgggataattaaacatgtccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctcctggagttcacttcatgtgtcttttctcttagttgacttctctctgtactgttttcactgtaataaactataacaatgagtacaacagcttctgatttccttagatacttctaataaattaccaggtctcaagtggtcttgggaacccctggcat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2761478 960 - 3013352 atggagtattatccagcaagaagtataaatggtatacccaagagacctttgatgactctcccaaatacacttttgagtaatacacttttgagagaagccatccagaaaagagtatatattgtttaattctatcataaaagttcaaaaataggtt-aaaaaa-gtatatgttattagcaatcagaataatagctacTTGCAGATGAAGCAGATGGCAATTTAAGGGAATTTGACTGTGAAATATGTACAATCACTTTGTCAAAATTAATT-AACTGTGTACTAC--------TTCAAT-AAAAACATTTAATAAACTATCTTGTCATTGCTATTTACATTTCTTACATAGTATTTAGGAATGGATGAaaaggtttaacctgactagcctgaattgctcaaatactgtacatttcaaagagggatccctctgcaggactagaccttagtctaggggttcatctctgagcccttggagtattttgcttgataaaagtgttcttgtattcctgaagtcttgggccatactctcccagttcgaccagacaaggttatgttatcaacgtgacttatgtgaacacctgtttttactctgggtgtaggaagaaagttgtgctgaaatgtcatggagccgaggtcaatcatatgggcattacatga----ctacatgactgatcccagtaaacaccttggacaactaggctccagcgagttttcctggttgtcaacgctttgcactttacacattgttgctgggataattaaacacgtccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctactggagttcacttcatttctcttttctcttagctgacttctctctgtactgttttcactataataaa-tataacaatgagtacaaaagcttctgatttccttagatacttctaataaattaccaggtctcaagtggtcttgggaacccctggcat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5989861 951 + 8656713 atggagtattatccaccaagaaagataaatggtatacccaagagagctttgatgactccctcaaacacaattttgagta-----------agagaagccatacagaaaagagtatatattgtttaattctatcataaaagttcaaaaataggttaaaaaaa-gtatatgttattagcaatcagaataatagctacTTGCAGATGAAGCAGATGGCAATTTAAGGGAATTTGATTGTGAAATATGTACAATCACTTTGTTAACATTAATT-AACTGTGTACTACTTGCATATTTCAAT-AAAAACATTTAATAAACTATCTTGTCATTGCTATTTACATTTCTTACATAGTATTTAGGAATGGATAAGaaggtttaacctgactagcctgaattgctcaaatactgtacatttcaaagaggggtccctctgcaggactagaccttagtctaggagttcatctctgagcccttggagtattttgc--------ggtgttcttgtattcctgaagtcttgggccatactctcccagctcgaccagacaaggttatgttatcaacgtgacttatgtgaacacctgtttttactctgggtgtaggaagaaagttgtgctgaaatgtcatggagctgaggtcagtcatatgggcattacatga----ctacgtgactgatcccagtaaacaccttggacaactaggctccagcgagttttcctggttggtaatgctttgcactttacacattgttgctgggataattaaacacatccccatgcaactgctctgggaggggacacctgagagcttggacttggtttctcctggagttcacttcatttgtcttttctcttagctgacttctctctgtactgttttcactgtcataaactacaacaatgagtacaatagcttctgatttccttagataattctaataaattaccaggtctcaagtggtcttggaaacccctggcat i colAng1.NW_012114544v1 I 102 C 0 s calJac3.chr3 129418227 948 - 190850796 atggagtattatccaacaagaagaataaatggtattcttaagagatcttggatgactctcccaaacacatttttgagta-----------agagaagccatccagaacagaatatatgttgtttaattctattataaaagttgaaaaacaggtaaaaaaaaaatctgtgttatcagctatcagaataatagttacTTGCAGATGGAGCAGATAGTAATTTAAGGTAATCTGACTGTGAAATATGTATAATCACTTTGTTAAAATTAATTTAGCTATATACTATTTGTATATTTCAAT-ACAACAGTTTACTAAACTATC---TCATTGTTATTTACATTTCTTAAATAGTATTTAGGAATGGCTGAaaagggttaacttgactggcctgagttgctcaaatactgtacattccaacgagag-----tctgcaggactggatcttcgtccaggagttcatctctaagcccttggagtattctgccagataaaagtgttcttgtattcctgaaatcttgggccatagtgtcccagtttgaccagacaaggttatgttatcaatgtgacttgtaggaacacctgtttttactctgggttcaggaagaaagctgtgctgaaatgtcacggaactgaggtcagtcatatgggcacta-atga----gtatgtgactgatcccagtggacaccttggacaactaatctccagtgagtgttcctggttggcaacactttgcacttcatacaatgctgctggaataatttaaaatgtccccatgtaactgctctgggaggggacacttgagagcttggacttggtttctcctgaacttcattt----tgtcttttctcttagctgacttctatctgtacctttttcactgtaataaactgtaacactgagtacaacagcttctgattcccttagattcttccagtaagttatcgggtctcaagtggccttgggaacccctggcat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6503787 944 - 25294431 atggagtattatccaacaagaagaataaatggtattcccaagagagcttggatgactctcccgaacacatttttgagta-----------agagaagccacccagaacagaatatacattgtttaattctatcataaaagttgaaaaacagattttaaaag----tctattattagcgatcagaataatagttacctGCAGATGGAGCAGATAGTAATTTAAGGTAATCTGACTGTGAAATATGTATAATCACTTTGTTAAAATTAATTTAGCTATGCACTATTTGTATATTTCAAT-AAAAAAGTTTACTAAACTATC---TCATTGTTATTTACATTTCTTAAATAGTATTTAGGAACGGCTGAaaagggttaacttggctcgcctgaattgctcaaatactgtacattccaacgagag-----tctgcaggactgggtattggtctgggagttcatctctaagcccttggagtattctgccagataaaagtgttattgtattcctgaagtcttgggccatactgtcccagtttgaccagacaaggttatgttatcaatgtgacttataggaacacctgtttttactaggggtgtaggaagaaagctgtgctgaaatgtcatgggactgaggtcagtcatatggggacta-atga----ctatgtgactgatgccagtgaacaccttggacaacttatgtccagtgagtgttcctggttggcaacattttgcacttcatacaatgctgctgggataattaaaaatgtccccatgtaactgctctgggagaggacacctgagagcttggacttggtttctcctgaacttcattt----tttcttttctcttagctgacttctatctgtacctttttcactgtgataaactgtaacactgagtacaacagtttctgattcccttagattcctccagtaagttattgggtctcaagtggtcttaggaacccctggcat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4058598 948 - 6311556 atggagtattatccaacaagaataataaatggtattcccaagagagcttggatagctctcccgaacacatttttgagta-----------agagaagccatccagaacagaatatatattgtttaattctattataaaagttgaaaaacaggtaaaaagaa-atctgtgttgttagcaatcagaataatagttacttGCAGATGGAGCAGATAGTAATTTAAGGTAATCTGACTGTGAAATATGTATAATCACTTTGTTAAAATTAATTCAGCTATATACTATTTGTATATTTCAAT-AAAAATGTTTACTAAAATATC---TCATTGTTATTTACATTTCTTAAATAGTATTTAGGAATGGCTGAaaagggttaacttggctggcctgaattgctcaaatactgtccattccaacgagag-----tctgcagcactggatcttggtccaggtgttcatctctaagcccttggagtattctgccacataaaagtgttcttgtattcctgaagtcttgggccatactgtcacagtttgaccagacaaggttatgttatcaatgtgacttaaatgaacacctgtttttactctgggtgtaagaacaaagctatgctgaaatgtcatggaactgaggtcagtcatatggggacta-atgactatgtatgtgactgatcccagtgaacaccttggacaactaatctccagtgagtgtttccggttggcaacactttgcacttcatacaatgctgctgggataatttaaaatgtccccatgtaactgctctgggagaggtcacgtgagagcttggacttggtttctcctgaac-tcattt----tgtcttttctcttagctgacttctatctgtacctttttcactgtaataaac--taacagtgagtacaacagtttctgattcccttagattcttccagtaagttatcgggtctcaagtggtcttgggaacccctggcaT i cebCap1.NW_016107420v1 I 359 C 0 s aotNan1.NW_018507635v1 14914212 940 + 15034901 atggaatattatccaacaagaagaataaatggtattcccaagagagcttggatgactcttccaaacacatttttgagga-----------atagaagccatccagcacagagtatatattgtttaattctattataaaagttgaaaaacaggtaaaaaaaa-atctgtgttattagcaatcagaataatagctacTGGCAGATGGAGCAGATAGTAATTTAAGGTAATCTGACTGTGAAATATGTATAATCACTTTGTTAGAATTAATTTAGCTATATACTATTTGTATATTTCAATAAAAAAAGTTTACTAAACTATC---TCATTGTT------ATTTCTTAAATAGTATTTAGGAATGGCTGAaaaaggttaacttggctggcctgaactgctcaaatactgtacattccaatgagag-----tctgcaggactggatcttggtccaggagttcgtctctaagcccttggagtattctgccagataaacatgctcttgtattcctgaaatcttaggccatactgtcccagtttgaccagaaaaggttatgttatcaacatgacttatatgaacacctgtttttactatgggtgtaggaagaaagctgtgctgaaatgtcatggaactgaggtcagtcatatggggacta-atga----ctatgtgactgatcccagtgaacaccttggacaactaatctccagtgagtgttcctggttggcaacactttgcacttcatacaatgctgctgggataattaaaaatgtccccatgtaactgctctgggaggggacacctgagagcttggacttggtttctcctgaccttcattt----tgtcttttctcttagctgacttctatc--tacctttttcactataataaactgtaacactgagtacaacagtttctgattcccttagattgttccagcacattatcgagtctcaagtggtcttgggaacccctggcaT i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315052 394 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=86761.000000 s hg38.chr9_KI270719v1_random 41866 9 + 176845 aTTACTGAA s panTro5.chr4 135066746 9 + 194502333 aTTACTGAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 47164 9 - 70559 aTTACTGAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90460741 9 - 115148730 aTTACCGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131403057 9 + 190429646 aTTATTGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130922063 9 + 189454096 aTTATTGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34913379 9 - 40319822 aTTATTGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4467474 9 - 9219162 aTTATTGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78992534 9 + 135778131 aTTATTGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2762438 9 - 3013352 aTTATTGAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5990812 9 + 8656713 aTTATTGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129419175 9 - 190850796 aTTACTGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6504731 9 - 25294431 aTTACTGAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4059546 9 - 6311556 GTTACTGAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14915152 9 + 15034901 GTTACTGAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26315446 9 - 93316391 aTTACTGAA i micMur3.chr14 I 394 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1752221 2216 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=1395202.000000 s hg38.chr9_KI270719v1_random 41875 140 + 176845 CTTAAAGTTTTCAGAATATCTGTATTTGATATATTCCATGGCAAGCACTATATCCATCATACTTTTTCATTTATTGACATAACTCCAAATATTTCCACATATCTAAAATTCAGGAAAGTAACCCTATCCTTACCTCTGAG s panTro5.chr4 135066755 140 + 194502333 CTTAAAGTTTTCAGAATATCTGTATTTGATATATTCCATGGCAAGCACTATATCCATCATACTTTTTCATTTATTGACATAACTCCAAATATTTCCACATATCTAAAATTCAGGAAAGTAACCCTATCCTTACCTCTGAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 47173 140 - 70559 CTTAAAGTTTTCAGAATATCTGTATTTGATATATTCCATGGCAAGCACTATATCCATCATACTTTTTCATTTATTGACATAACTCCAAATATTTCCACATATCTAAAATTCAGGAAAGTAACCCTATCCTTACCTCTGAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90460750 140 - 115148730 CTTAAAGTTTTCAGAATATCTGTATTTGATATATTCCATGGCAAGCACTATATCCATCATACTTTTTCACTTATTGACATAACTCCAAATATTTCCACATATCTAAAATTCAGGAAAGTAACCCTATCCTTACCTCTGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131403066 140 + 190429646 CTTAGAGTTTTCAGAATATGTGTCTTTGATATATTCCATGGTAAGCACTATATCCATCATACTTGTTCATTTATTGACAGAACTCCAAATATTTCCACATATCTAAAATTTGGGAAAGTAACCCTATCCTTACCTCTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130922072 140 + 189454096 CTTAGAGTTTTCAGAATATGTGTCTTTGATATATTCCATGGTAAGCACTATATCCATCATACTTGTTCATTTATTGACAGAACTCCAAATATTTCCACATATCTAAAATTTGGGAAAGTAACCCTATCCTTACCTCTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34913388 140 - 40319822 CTTAGAGTTTTCAGAATATGTGTCTTTGATATATTCCATGGTAAGCACTATATCCATCATACTTGTTCATTTATTGACAGAACTCCAAATATTTCCACATATCTAAAATTCgggaaagtaaccctatccttacctctgag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4467483 140 - 9219162 CTTAGAGTTTTCAGAATATGTGTCTTTGATATATTCCATGGTAAGCACTATATCCATCATACTTGTTCATTTATTGACAGAACTCCAAATATTTCCACATATCTAAAAttcaggaaagtaaccctatccttacctctgag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78992543 139 + 135778131 CTTAGAGTTTTCAGAATATGTCTCTTTGATATATTCCATGGTAAGCACTATATCCATCATACTTGTTCATTTATTGACAG-ACTCCAAATATTTCCACATCTCTAAAATTCAGGAAAGTAACCCTATCCTTACCTCTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2762447 140 - 3013352 CTTAGAGTTTTCAGAATATGTGTCTTTGATATATTCCATGGTAAGCACTATATCCATCATACTTGTTCGTTTATTGACAGAACTCCAAATATTTCCACGTATCTAAAAttcaggaaagtaaccctatccttacctctgag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5990821 140 + 8656713 CTTAGAGTTTTCAGAATATGTGTCTTTGATATATTCTATGGTAAGCACTATATCCATCATACTTGTTCATTTATTGACAGAACTCCAAATATTTCCACATATCTAAAATTCAGGAAAGCAACCCTATCCTTACCTCTGAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129419184 139 - 190850796 CTTAGAGTTTTCAGAATATGTGTCGTTGGTATTTTCCATGGCAAGCACTATATCCATCATACTTTTTCATTTATTGACAGAACTCCAAATGTTTCCACATATCTAAAATTCAGGAAAGTAACCCTATTTTTACCTCT-AG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6504740 139 - 25294431 CTTAGAGTTTTCAGAATATGTGTCTTTGATATTTTCCATGGCAAGCACTATATCCATCATACTTTTTCATTTATTGACAGAACTCCAAATATTTCCACATATCTAAAATTCAGGAAAGTAACCCTATCCTTACCTCT-AG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4059555 139 - 6311556 CTTAGAGTTTTCAGAATATGTGTCTTTGATATTTTCCATGGCAAGCACTATATCCATTATACTTTTTAATTTATTGACAGAACTCCAAATATTTCCACATATCTAAAATTCAGGAAAGTAACCCTATACTTACCTCT-AG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14915161 138 + 15034901 CTTAGAGTTTTCAGAATATGTGTCTTTGATATTTTCCGTGGCAAGCACTATATCCATCACACTTTTTCATTTATCGATGGAACTCCAAA-ATTTCCACATATCTAAAATTCAGGAAAGGAGCCCTATCCTTACCTCT-AG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26315455 138 - 93316391 TTTATAGTTTTCAGAACATTT-TACTTAATATATTTCCTGGCAATCACCGTATCCATCACACTTTTTCA-TTATAGTCAGAACTTCAATTACTTCCACACATCTAAAATTCAGAAAGAGAACCCTATTGTTACCTCTGAG i micMur3.chr14 C 0 I 72 s dasNov3.JH569232 1754437 116 + 5974691 CTTAAATGCTACTGAACACA-GTATTTGATATATTTCTTGG-------------CATCACCCTC-----TTTATTAACAGAACCCCAATAATTTCAAGATTTCTAAAATT-----AAGTGACCCTATCCTTAACTAAGAG i dasNov3.JH569232 I 2216 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=630521.000000 s hg38.chr9_KI270719v1_random 42015 77 + 176845 GATAAAGCTTGTTAACTATAGGTAAACCATGATAATTTAAATTCACCTGTTTGTGACTGACTTTTTTTAATGACTGC s panTro5.chr4 135066895 77 + 194502333 GATAAAGCTTATTAAGTATAGGTAAACCATGACAATTTAAATTCACCTGTTTGTGATTGACTTTTTTTAATGACTGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 47313 76 - 70559 GATAAAGCTTGTTAAGTATAGGTAAACCATGATAATTTAAATTCACCTGTTTGTGACTGAC-TTTTTTAATGACTGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90460890 77 - 115148730 GATAAAGCTTATTAAGTATAGGTAAACCATGATAATTTAAATTCACCTGTTTGTGATTGACTTTTTTTAATGACTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131403206 76 + 190429646 GGTAAAGCTTGTTAAGTGTAAGTAAACCATGACAATTTAAATTCACCTGTTTGTGACTGAC-TTTTTTTATGACTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130922212 76 + 189454096 GGTAAAGCTTGTTAAGTGTAAGTAAACCATGACAATTTAAATTCACCTGTTTGTGACTGAC-TTTTTTTATGACTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34913528 76 - 40319822 ggtaaagcttgttaagtgtaagtaaagcatgacaatttaaattcacctgtttgtgactgac-tttttttatgactat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4467623 76 - 9219162 ggtaaagcttgttaagtgtaagtaaaccatgacaatttaaattcacctgtttgtgattgac-tttttttatgactat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78992682 76 + 135778131 GGTAAAGCTTGTTAAGTGTAAGTAAACCATGACAATTTAAATTCACCTGTTTGTGATTGAC-TTTTTTTATGACTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2762587 76 - 3013352 ggtaaagcttgttaagtgtaagtaaaccatgacaatttaaattcacctgtttgtgattgac-tttttttatgactat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5990961 76 + 8656713 GATAAAGCTTGTTAAGTGTAGGTAAACCATGACAATTTAAATTCACCTGTTTGTGATTGAC-TTTTTTTATGACTAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129419323 75 - 190850796 GATAAAGCTTGTTATGTGTAGGTAAACCACGACAATTTAAATTCACCTGTTTTTGATTGAC--TTTTTTATGACTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6504879 75 - 25294431 GATAAAGCTTGTTAAGGGTAGGTAAACCATGACAATTTAAATACATCTGTCTTTGATTGAC--TTGTTTATGACTAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4059694 75 - 6311556 GATAAAGCTTGTTAAGCATAGGTAAATCATGACAATTTAAATACACATGTTTTTGATTGAC--TTGTTTATGACTAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14915299 75 + 15034901 GATAAAGCTTGTTATGTGTAGGTAAACCACAACAATTTAAATTCATCTGATTTTGATTGAC--TTTTTTATGACTAT i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1754553 71 + 5974691 CACAAATTCTGTTGGATTTAGGTAAAATATAACAGTTTAAATTCACTAGTTTGCAATTCAG-----GTAATGCCTT- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315593 72 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=478282.000000 s hg38.chr9_KI270719v1_random 42092 46 + 176845 TTTTAGTCAAGAAAATGTGAGGGTAGGTCTGCCAAGAGCTACTGAA s panTro5.chr4 135066972 46 + 194502333 TTTTAGTCAAGAAAATGTGAGGGTAGGTCTGCCAAGAGCTACTGAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 47389 46 - 70559 TTTTAGTCAAGAAAATGTGAGGGTAGGTCTGCCAAGAGCTACTGAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90460967 46 - 115148730 TTTTAGTCAAGAAAATGTAAGGGTAGGCCTGCCAAGAGCTAATGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131403282 46 + 190429646 TTTTAGTCAAGAAAATGTGAGGGTAGTTCTGCCAAGAGCTGCTGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130922288 46 + 189454096 TTTTAGTCAAGAAAATGTGAGGGTAGGTCTGCCAAGAGCTGCTGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34913604 46 - 40319822 ttttagtcaagaaaatgtgagggtaggtctgccaagagctgctgAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4467699 46 - 9219162 ttttagtcaagaaaatgtgagggtaagtctgccaagagctgctgaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78992758 46 + 135778131 TTTTAGTCAAGAAAATGTGAGGGTAGGTCTGCCAAGAGCTGCTGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2762663 46 - 3013352 ttttagtcaagaaaatgtgagggtaagtctgccaagagctgctgaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5991037 46 + 8656713 TTTTAGTCAAGAAAATGTGAGGGTAGGTCTGCCAAGAGCTGCTGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129419398 46 - 190850796 CTTTAGTCAAGAAAATTTGAAAGTATGTCTGCCAAGAGCTACTGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6504954 46 - 25294431 TTTTAGTCAAGAAAATATGAAGGTATGTCTGCCAAAAGCTACTGAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4059769 46 - 6311556 TTTTAGTCAAGAAAATATGAAAGTATGTCTGCCAAGAGCTACTGAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14915374 46 + 15034901 TTTTAGTCAAGAAAATATGAAGGTATGTCTGCCAAGAGTTACCAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26315665 46 - 93316391 TTTTGGTCAAGAAATTGTGAGGGTGGGTCTGCCAAGAGCTACTGAA i micMur3.chr14 I 72 I 5083 s dasNov3.JH569232 1754624 36 + 5974691 TTTTGACCAAGAAAATATAAAGGAGGATTTGCCAAG---------- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=1870644.000000 s hg38.chr9_KI270719v1_random 42138 230 + 176845 AAGAGTTACAT----TTTCT----AAAAAAA-----------------AAAA--------------AATCCTCGTCTTTTCTTTTTGAGAATAATTTGTGGTGTTTCTGAAATCATTGTCTGCCCATAAAGAGA----GATTACTTAAACAAAAAGTCTGTATAAAATATGACTACAAAGAAAGATGAG--AAAAAAATCATATTCTTGATTAATTTATTGATCTATTAAATTAATAGTCTTGGAAGTAGATCCCTCTTTGGACTTCCAGTTAga s panTro5.chr4 135067018 226 + 194502333 AAGAGTTACAT----TTTCT----AAAAAAA-----------------AAAA----------------TCCTCTTCTTTTCTCTTTGAGAATAATGTGTGGTATTTCTGAAATCATTGTCTGCCCATAAAGAGA----GATTACTTAAACAAAAAGTCTGTATAAAAT--GACTACAAAGAAAGATGAG--GAAAAAATTATATTCTTGATTAATTTATTGATCTATTAAATTAATAGTCTTGGAAGTAGATCCCTCTTTGGACTTCCAGTTAga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 47435 227 - 70559 AAGAGTTACAT----TTTCT----AAAAAAA-----------------AAAA---------------ATCCTC-TCTTTTCTCTTTGAGAATAATTTGTGGTGTTTCTGAAATCATTGTCTGCCCATAAAGAGA----GATTACTTAAACAAAAAGTCTGTATAAAATATGACTACAAAGAAAGATGAG--AAAAAAATCATATTCTTGATTAATTTATTGATCTATTAAATTAATAGTCTTGGAAGTAGAT-CCTCTTTGGACTTCCAGTTAga i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90461013 235 - 115148730 AAGAATTACAT----TTTCT----aaaaaaa-----------------aaaaaaa---------aaaaTCCTCTTCTTTTCTCTTTGAGAATAATTTGTGGTATTTCTGAAATCATTGTCTGCCCATAAAGAGA----GATTACTTAAACAAAAAGTCTGCATAAAATATGACTATAAAGAAAGATGAG--AAAAAAATGATATTCTTGATTAATTTATTGATCTATTGAATTAATAGTCTTGGAAGTAGATCCCTCTTTGGACTTCCAGTTAga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131403328 251 + 190429646 AGGATTAACAT----TTTCT----aaaaaaa----------aaaaaaaaaaaaaaaacgaaaacaaaaaCCTCTTCTTTTCTCCTTGAGAATAATTTGTGGTATTTCTGGAATCATTGTCTGTCCATAAGGAGA----GATTACTTAAACAAAAAGTCCACATAAAATATGACTACAAAGAAAGATGAG--AAAAAAATTCTACTCTTGATTAATTTATTGTGCTATTAAATTAATAGTCTTGGGAGTAGATCCCTCTTTGGACTTCCAGTTAga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130922334 251 + 189454096 AGGATTAACAT----TTTCT----aaaaaaa----------aaaaaaaaaaaaaaaacgagaacaaaaaCCTCTTCTTTTCTCCTTGAGAATAATTTGTGGTATTTCTGGAATCATTGTCTGTCCATAAGGAGA----GATTACTTAAACAAAAAGTCCACATAAAATATGACTACAAAGAAAGATGAG--AAAAAAATTCTACTCTTGATTAATTTATTGTGCTATTAAATTAATAGTCTTGGGAGTAGATCCCTCTTTGGACTTCCAGTTAga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34913650 265 - 40319822 AGGAGTAACAT----TTGCT----aaaaaaaacaaacaaacaaacaaaaaaaaaaaatgaaaacaaaaaCCTCTTCTTTTCTCCTTGAGAATAATTTGTGGTATTTCTGGAATCATTGTCTGTCCATAAGGAGAGATTGATTACTTAAACAAAAAGTCCACATAAAATATGACTACAAAGAAAGATGAG--AAAAAAATTCTACTCTTGATTAATTTATCGTGCTATTAAATTAATAGTCTTGGGAGTAGATCCCTCTTTGGACTTCCAGTTAga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4467745 239 - 9219162 aggagtaacat----tttct----aaaaaaa----------------------aaaacgaaaacaaaaatctcttcttttctccttgagaataatttgtggtatttctggaatcattgtctgtccataaggaga----gattacttaaacaaaaagtccacataaaatatgactacaaagaaagatgag--aaaaaaattctactcttgattaatttattgtgctattaaattaatagtcttgggagtagatccctctttggacttccagttaga i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78992804 244 + 135778131 AGGAGTAACAT----TTTCT----Taaaaaa-----------------aaaaaaaaacgaaaacaaaaaCCTCTTCTTTTCTCCTTGAGAATAATTTGTGGTATTTCTGGAATCATTGTCTGTCCATAAGGAGA----GATTACTTAAACAAAAAGTCCACATAAAATATGACTACAAAGAAAGATGAG--AAAAAAATTCTACTCTTGATTAATTTATTGTGCTATTAAATTAATAGTCTTGGGACTAGATCCCTCTTTGGACTTCCAGTTAga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2762709 239 - 3013352 aggagtaacat----tttct----aaaaaaa-----------------aaaaaa-----gaaacaaaaacctcttcttttctccttgagaataatttgtggtatttctgaaatcattgtctgtccataaggaga----gattacttaaacaaaaagtccacataaaatatgactacaaagaaagatgag--aaaaaaattctactcttgattaatttattgtgccattaaattaatagtcttgggagtagatacctctttggacttccagttaga i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5991083 238 + 8656713 GAAAGTAACAA----TTTCT----AAAACAA-----------------------AAACAAAAACAAAAACCTCTTCTTTTCTCCTTGAGAATAATTTGTGGTATTTCCGGAATCATTGTCTGTCCATAAGGAGA----GATTACTTAAACAAAAAGTCCACATAAAATATGACTACAAAGAAAGATGAG--AAAAAAATTCTACTCTTGATTAATTTATTGTGCCATTAAATTAATAGTCTTGGGAGTAGATCCCTCTTTGGACTTCCAGTTAga i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129419444 225 - 190850796 AAGAGTTATGT----TTTCT----AAAAAAA------------------------------------GTCCTCTTCTTTTCTCATTGAATATAATTTGTGATATTTCTGAAATCATTATCTGTCAGTAGGAAGA----GATTGCTTAAACAAAAAGTCCATATAAAATGTGACTACAAAgaaagatgag--aaaaaaattgtattcttgattaattcattgagacattaaattaattatcttggaagtagatccctctttggacttccagttaga i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6505000 226 - 25294431 AAGAGTTGCAT----TTTCTAAAAAAAAAAA------------------------------------ATCCTCTTCTTTTATCTTTGAGTATAATTTGTGATATTTCTGAAATCATTGTCTGACCATAAAGAGA----GA----TTAAACAAAAAGTCCATATAAAATGTGACTACAAAGCCAAATGAG-AAAAAAAATTGTATTCCTGATTAATTCATTGAGATATTAAATTAATAATCTTGGAAGCAGATTCCTCTTTGGACTTCCAGTTAga i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4059815 224 - 6311556 GAGAGTTACAT----TTTCT----AAAAAAA------------------------------------ATCCTCTTCTTTTCTCTTTGAGTATAATTTGTGATATTCCTGAAATCATTGTCTGCCCAAAAGGAGA----GATTACTTAAACAAAAAATCCATATAAAATGTGACTACAAAGAAAAATGAG---AAAGAATTGTATTCCTGATTAATTCATTGAGATATTAAATTAATAATCTTGGAAGTAGATTCCTCTTTGGACTTCCGGTTAga i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14915420 226 + 15034901 AAGAGTTCCAT----TTCCT----AAAAAAA------------------------------------ATCCTCTTCTTTTCTCTTTGAGTATAATTTGTGATATTTCTGTAATCATTGTCTGTCCATAAGGAGA----GATTGCTTAAACAAAAAGTCCATATAAAATGTGACTACAAAGAAAGATGAG-AAAAAAAAATGTATTCTTGATTAATTCATTGAGATATTAAATTAATTATCTTGGAAGTAGATCCCTCTTTGGACTTCCAGTTAga i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1754660 226 + 5974691 --GATTTACGGTTTATTTTT----ACAAAAA------------------------------------GAGCTCCT-TTTTCTCTCTGAATATGGTTGGCAGTgttgctgaagtcattttctgcagatgaggata----tctaatcttaggaaaaagccaataaaaaatat-cctgcaaagaaagatggtgaaaaaaaatcctgttcttaatgaattctttaagctgctgaattaactattttggagat-gttctccctttggacACATAGTTAAA i dasNov3.JH569232 C 0 I 2892 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=2898999.000000 s hg38.chr9_KI270719v1_random 42368 353 + 176845 gacagggccttactctatggcccaggctggagtgtagtagt---gccaccatagctcattgtgtagctcaccgcaacctcaaactcctggactcaagcaaacctcctgcctcagcctcccaagtggctgg-aatacagacaggtgccaccatgaccacacctggcta-----------------------tttttttttcaattgtagagctaaggtctccctatgttgcccaggctggttttgaactcctggcctccagtgagcctcccacctcagcctcccaaaatgctgggattccaggcataagccacgagacctggccTATTTATAGTTTAAATTTTCTCATCGTCTAAA-TAAAAGATCTAAAACTAATTGTCTA s panTro5.chr4 135067244 357 + 194502333 gacagggccttactctatggcccaggctggagtgtagtagtagtgccaccatagctcattgtgtagctcaccgcaacctcaaactcctggactcaagcaaacctcctgcctcagcctcccaagtggctgg-aatacagacaggtgccaccacgaccacacctggcta-----------------------tttttttttcaattgtagagctaaagtctccctatgttgcccaggctggttttgaactcctggcctccagtgagcctcccacctcagcctcccaaagtgctgggattccagacataagccaccagacctggccTATTTATAGTTTAAATTTTCTCATCGTCTAAAATAAAAGATCTAAAACTAATTGTCTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 47662 354 - 70559 gacagggccttactctatggcccaggctggagtgtagtagt---gccaccatagctcattgtgtagctcaccgcaacctcaaactcctggactcaagcaaacctcctgcctcagcctcccaagtggctgg-aatacagacaggtgccaccatgaccacacctggcta----------------------ttttttttttcaattgtagagctaaggtctccctatgttgcccaggctggttttgaactcctggcctccagtgagcctcccacctcagcctcccaaaatgctgggattccaggcataagccaccagacctggccTATTTATAGTTTAAATTTTCTCATCGTCTAAA-TAAAAGATCTAAAACTAATTGTCTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90461248 353 - 115148730 gacagggccttactctatggccaaggctggagtgtagtagt---gccaccatagctcattgtatagctcactgcaacctcaaactcgtggtctcaagcaaacctcctgcctcagcctcccaagtggctgg-aatacagacaggtgccaccatgaccacacctggcta-----------------------tttttttttcaattgtagagctaaggtctccctatgttgcccaggctggttttgaactcctggcctccagtgagcctcccacctcagcctcccaaagtgctgggattccaggcataagccaccagacctggccTATTTATAGTTTAAATTTTCTCATCGTCTAAA-TAAAAGATCTAAAAATAATTGTCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131403579 354 + 190429646 gatagggccttcctctatggcccaggctggagtgtagtagt---gccaccatagctcattgtatagcgcactgcaacctcaaactcctgggctcaagcagacttcctgcctcagcctcccaagtggctgg-aatacagacaggtgccaccatgcccacacctagcta----------------------ttttttttttcagttgtggagttaagatctcactatgttgcccaggctgatcttgaactcctggcctccagtgagcctcccccctcagcctccgaaagtgttgggattccagtcatgagccaccaggcctggcATATTTATAGTTTAAATTTTCTCGTAGTCTAAA-TAAAAGATCTAAAACTAATTGTCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130922585 354 + 189454096 gatagggccttcctctatggcccaggctggagtgtagtagt---gccaccatagctcattgtatagcgcactgcaacctcaaactcctgggctcaagcaaacttcctgcctcagcctcccaagtggctgg-aatacagacaggtgccaccatgcccacacctagcta----------------------ttttttttttcagttgtggagttaagatctcactatgttgcccaggctgatcttgaactcctggcctccagtgagcctcccccctcagcctccgaaagtgctgggattccagtcatgagccaccaggcctggcATATTTATAGTCTAAATTTTCTCATAGTCTAAA-TAAAAGATCTAAAACTAATTGTCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34913915 354 - 40319822 gatagggccttcctctatggcccaggctggagtatagtagt---gccaccatagctcattgtatagcgcactgcaacctcaaactcctgggctcaagcaaacttcctgcctcagcctcccaagtggctgg-aatacagacagttgccaccatgcccacacctagcta----------------------ttttttttttcagttgtggagttaagatctcactatgttgcccaggctgatcttgaactcctggcctccagtgagcctcccccctcagcctccaaaagtgctgggattccactcatgagccaccaggcctggcATATTTATAGTCTAAATTTTCTCATAGTCTAAA-TAAAAGATCTAAAACTAATTGTCTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4467984 354 - 9219162 gataggaccttcctctatggcccaggctggagtgtagtagt---gccaccacagctcattgcatagcgcactgcaacctcaaacagctgggctcaagcaaacttcctgcctcagcttcccaagtggctgg-aatacagacaggtgccaccatgcccacacctagcta----------------------ttttttttttcaattgtggagttaagatctcactatgttgcccaggctgatcttgaactcctggcctccagtaagcctcccccctcagcctccaaaagtgctgggattccagtcatgagccaccaggcctggcATATTTATAGTTTAAATTTTCTCATAGTCTAAA-TAAAAGATCTAAAACTAATTGTCTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78993048 357 + 135778131 gatagggccttcctctatggcccaggctggagtgtactagt---gccaccatagctcattgtatagcccactgcaacctcaaactcctggtctcaagcaaacttcctgccttagcctcccaagtggctgg-aatacagacaggtgccaccatgcccacacctggcta-------------------tttttttttttttcaattgtggagttaagatctcactatgttgcccaggctgatcttgaactcctggcctccagtgagcctcccccctcagcctccgaaagtgctcagattccagtcatgagccaccaggcctggcATATTTATAGTTTAAATTTTCTCATAGTCTAAA-TAAAAGATCTAAAACTAATTGTCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2762948 355 - 3013352 gatagggccttcctctatggcccaggctggagtgtagtagt---gccaccatagctcattgtatagcgcactgcaacctcaaactcctgggctcaagcaaacttcctgcctcagcctcccaagtggctgg-aatacagacaggtgccaccatgcccacacctagcta---------------------tttttttttttcaattgtggagttaagatctcactatgttgcccaggctgatcttgaactcctggcctccagtaagcctcccccctcagcctccgaaagtgctaggattctagtcatgagccaccaggcctggcATATTTATAGTTTAAATTTTCTCATAGTCTAAA-TAAAAGATCTAAAACTAATTGTCTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5991321 352 + 8656713 gataaggccttcctctatggcccaggctggagtgtagtagt---gccaccatagctcattgtatagcgcactgcaacctcaaactcctgggctcaagcaaacctcctgcctcagcctcccaagtggctgg-aatacagacaggtgccaccatgcccacacctagcta------------------------ttttttttcaattgtagagttaagatctcactatgttgcccagcctgatcttgaactcctggcctccagtaagcctcccacctcagcctcccaaagtgctgggattccaggcatgagccaccaggcctggcATATTTATAGTTTAAATTTTCACATAGTCTAAA-TAAAAGATCTAAAACTAATTGTCTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129419669 355 - 190850796 gatagggacttactcggtggcccaggctagagtgtagtggt---gccatcatagttcattttatagctcactataaccttgaactaatgggcttaagaaaacctcctgcctcagcctcccaagtggctggaaatacagacaggtgctaccatgcccacacccagcta----------------------ttttttttttcaattgtagagataaggtctccctatgttgcccagactggtcttgaactcctggtctccagtgagtcttgaacctcagcctcccaaaatgctgggattctgggcgtgagccaccaggactggccTATTTATAGTTTGAATTATCTCGTTGTCTAAA-TAAAAGATCTCAAACTAATTGTCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6505226 377 - 25294431 gatagggtcttactcggtggcccaggctagagtgtagtggt---gccatcatagctcattttatagctcactataacctcaaactaacgggctcaagaaaacctcctgtctcggcctcccaagtggctgaaaatacagacaggtgttaccatgcccacacctggttattttcttttcttttattttttttttttttcttcagttgtagagataaggtcttcctatgttgcccagactggtcttgaactcttggtctccagtgaatcttgcacctcagcctcccaaagtgctaggattccgggcatgagccactaggactggccTATTTATAGTTTGAATTATCTTGCTGTCCAAA-TAAAAGATCTCAAACTAATTGTCTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4060039 358 - 6311556 gacagggtcttactcggcggcccaggctagagtgtagtggt---gccaccatagctcattttatagctcactataacctcaaactaatgggctcaaaaaaatctcctgtctcagcctcccaagtggctggaaatacagacacgtgctaccatgcccacatccagcta-------------------tttttttttctttcaattgtagagatatggtcttcctatgttgcccagactgatcttgaactcctggtctccagtgagtgttgtgcctcagcctcccaaagtgctgggattctgggaatgagccaccaagattggccTATTTATAGTTTCAATTATCTCATTGTCCAAA-TAAAAGATCTCAAACgaactgtcta i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14915646 357 + 15034901 gatagggtcttactcggtggcccaggctagagtgtagtggt---gccatcatagctcattttatagctcactataacctcaaactaatgggcttaagaaaacctcctgcctcagcctgccaagtgtctggaaatacaaacaggtgctaccatgcccacacctggctt-------------------tttttttttttttcaattgtagagataaggtctccctatgttgcccagac-agtcttgaactcctggtctccagtaagtcttgcacctcagcctcccaaagtgctgggattctgggcatgagccaccAGGGATGGCCTATTTATAGTTGGAATTATTTTGTTGTCTAAA-TAAAAGATCTCAAACTAATTGTGTA i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 937162 3301 - 3201129 I a score=2384101.000000 s hg38.chr9_KI270719v1_random 42721 276 + 176845 Agttggcggagcagtcagaacacac---acatttattgattaaattcattgtcttatatggatgtggttcatggtgcccaaaacaattacaatagtaacatcaaaggtcactggttacagattatcatatcaaatataattataattaaaaagtttgaaatattgtgagatttacctagatatggcacagagatacaaatgaacacatgctatt--aaaaagtggtgccaataaagttgcttgatgcagggtggtcataaaccttcaatttgtgaaaaaca s panTro5.chr4 135067601 276 + 194502333 Agttggcggagcagtcagaacacac---acatttattgattaaattcattgtcttatatagatgtggttcatggtgcccaaaacaattacaatagtaacatcaaaggtcactggttacagattatcgtatcaaatataattataattaaaaagtttgaaatattgtgagatttacctagatatggcacagagatacaaatgaacacatgctatt--aaaaagtggtgccaataaagttgcttgatgcaaggttgatataaaccttcaatttgtgaaaaaca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48016 276 - 70559 Agttggcggagcagtcagaacacac---acatttattgattaaattcattgtcttatatggatgtggttcatggtgcccaaaacaattacaatagtaacatcaaaggtcactggttacagattatcatatcaaatataattataattaaaaagtttgaaatattgtgagatttacctagatatggcacagagatacaaatgaacacatgctatt--aaaaagtggtgccaataaagttgcttgatgcagggttgtcataaaccttcaatttgtgaaaaaca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90461601 276 - 115148730 Agttggcggagcaatcagaacacac---acatttattgattaaattcattgtcttatatggatgtggttcatggtacccaaaacaattacaatagtaacatcaaaggtcactggttacagattatcatatcaaatataattataattaaaaagtttgaagtactgtgagatttacccagatatggcacagagatacaaatgaacacatgcaatt--aaaaagtggtgccaataaagttgcttgatgcagggttgtcataaaccttcaatttgtgaaaaacg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131403933 267 + 190429646 Agttggcggagc-gtcagaacacac---acatttattgattaaattcactgtcttgtatgaatgtggttcatggtgcccaaaacaattacaatagtaacatcaaaggtcactggttacagattatcatatcaaatatcattataatttaaaagtttgaaatctaatgagatgtacccagatatgacacat--------atgaatacctgctatt--aaaaagtggtgccgatacaattgcttgatgcagggttgtcacaaaccttcaatttgtgaaaaaca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130922939 268 + 189454096 Agttggcggagcagtcagaacacac---acatttattgattaaattcactgtcttgtatgaatgtggttcatggtgcccaaaacaattacaatagtaacatcaaaggtcactggttacagattatcatatcaaatatcattataatttaaaagtttgaaatctaatgagatgtacccagatatggcacat--------atgaatacctgctatt--aaaaagtggtgccgatacaattgcttgatgcagggttgtcacaaaccttcaatttgtgaaaaaca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34914269 268 - 40319822 Agttggcggagcagtcagaacacac---acatttattgattaaattcactgtcttgtatgaatgtggttcatggtgcccaaaacaattacaatagtaacatcaaaggtcactggttacagattatcatatcaaatatcattataatttaaaagtttgaaatctaatgagatgtacccagatatggcacat--------atgaatacctgctatt--aaaaagtggtgccgatacaattgcttgatgcagggttgtcacagaccttcaatttgtgaaaaaca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4468338 265 - 9219162 Agttggcggagcagtcagaacacac---acatttattgattaaattcactgtcttgtatgaatgtggttcatggtgcccaaaacaattacaatagtaacatcaaaggtcactggttacagattatcatatcaaat---attataatttaaaagtttgaaatctaatgagatgtacccagatatggcacat--------atgaatacctgctatt--aaaaagtggtgccgatacaattgcttgatgcagggttgtcacaaaccttcaatttgtgaaaaaca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78993405 268 + 135778131 Agttggtggagcagtcagaacacac---acatttattgattaaattcactgtcttgtatgaatgtggttcatggtgcccaaaacaattacaatagtaacatcaaaggtcactggttacagattatcatatcaaatatcattataatttaaaagtttgaaatctaatgagatgtacccagatatggcacat--------atgaacacctgctatt--aaaaagtggtgctgataaaattgcttgatgcagggttgtcacaaaccttcaatttgtgaaaaaca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2763303 268 - 3013352 Agttggcggagcagtcagaacacac---acatttattgattaaattcactgtcttgtatgaatgtggttcatggtgcccaaaacaattacaatagtaacgtcaaaggtcactggttacagattatcatatcaaatatcattataatttaaaagtttgaaatctaatgagatgtacccagatatggcacat--------atgaatacctgctatt--aaaaagtggtgccgatacaattgtttgatgcagggttgtcacaaaccttcaatttgtgaaaaaca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5991673 268 + 8656713 Agttggcagagcagtcaaaacacac---atatttattgattaaattcactgtcttatatgaatgtggttcatggtgcccaacacaattacaatagtaacatcaaaggtcactggttacagattatcatatcaaatatcattataatttaaaagtttgaaatctaatgagatgtacccaaatatagcacat--------atgaacacctgctatt--aaaaagtggtgctgataaagttgcttgatgcagggttgtcataaaccttcaatttgtgaaaaaca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129420024 277 - 190850796 Agttggtggagcagtcagaacacac---acgtttattgattaaattcactgttttatatggatgtggttcatggtgcccagaacaattataatagtaacatcagaagtcactgatcacagactatcatagcaaatataattataatttaaaagtttgaaatattgtgaggtttacccagatatagcacagagatacaaatgaacacatgctatt-gaaaaagtggtgccgacaaagtcgcttgatgcagggttgtcacaaaccttcaatttgtgaaaaaca i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6505603 276 - 25294431 Agttggtggagcagtgaaaacacac---acatttattgattaaattcactgttttatattgatgtggttcatggtgcccaaaataattacaatagtaacatgagaagtcactgatgacagattatcacagcaaatataattataatttaaaagtttgaaatagtgtga-atttacccagatacggcacagagatacaaatgaacacatgctatt-gaaaaagtggtgccgataaagtcgcttgatgcagggttgtcacaaaccttcagtttgtgaaaaaca i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4060397 277 - 6311556 agttggtggagcagtcacaacacac---atatttattgattaaattcactgttttatatggatgtggttcatggtgcccgaaagaattacaatagtaatatcagaagtcactgattacagattatcatagcaaatataattataatttaaaagtttgaaatattgtgaaatttacccagatacgacacagagatacaaatgaacacatgctatt-gaaaaagaggtgccgataaagtcgcttgatgcagggttgtcacaaaccttcaatttgtgagaaaca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14916003 277 + 15034901 Agtcggtggagcagtcagaacacac---acatttattgattaaattcactgtttcatatggatatggttcatggtgcccaaaacaattacaatagtaacatcaaaggtcactgatcacagattatcatagcaaataaaattataatttaaaagtttgaaatattgtgagatttacccagatatagcacagagacacaaatgaacacatgctatt-gaaaaactggtgccgataaagtcgcttgatgcagggttgtcacaaaccttcaatttgtgaaaaaca i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 940463 251 - 3201129 agattgtggggctgtcgggatacacacaacacacataaatcaagccctctgtcttatatgagcatggttcatggtgtccccca-aattaccacagtaactttgaagattgctgatcac-------cttaatagatataataataacaaaaatgttagaagta-------------caaaatgtgacacag--------aagtaagcacacttttggaagaaatgatgacgatagatttgttcaatggacgagtgccata-accttcaacttgtaaaaaata i otoGar3.GL873702 I 3301 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4401111 2953 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I a score=15747.000000 s hg38.chr9_KI270719v1_random 42997 2 + 176845 ca s panTro5.chr4 135067877 2 + 194502333 ca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48292 2 - 70559 ca i gorGor5.CYUI01001450v1 C 0 C 0 s ponAbe2.chrUn 4404064 2 + 72422247 ca i ponAbe2.chrUn I 2953 I 130 s nomLeu3.chr7b 90461877 2 - 115148730 ca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404200 2 + 190429646 cg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130923207 2 + 189454096 cg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34914537 2 - 40319822 cg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4468603 2 - 9219162 ca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78993673 2 + 135778131 ca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2763571 2 - 3013352 ca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5991941 2 + 8656713 ca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129420301 2 - 190850796 tg i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6505879 2 - 25294431 ca i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4060674 2 - 6311556 ca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14916280 2 + 15034901 ta i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 940714 2 - 3201129 ca i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I a score=586088.000000 s hg38.chr9_KI270719v1_random 42999 69 + 176845 ttatctgtgaagccaagtgaagcaaagcacaatcaattgaagtatgtctATATTCCACTGCCTTTGTAG s panTro5.chr4 135067879 69 + 194502333 ttatctgtgaagccaagtgaagcaaagcacaatcaattgaagtatgactACATTCCACTGTCTTTGTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48294 69 - 70559 ttatctgtgaagccaagtgaagcaaagcacaatcaattgaagtatgtctATATTCCACTGCCTTTGTAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90461879 69 - 115148730 ttatctgtgaagccaagtgaagcaaagcacaatcagttgaagtatgtctATATTCCACTGCCTTTGTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404202 69 + 190429646 ttatttgtgaagccaagtgaagcaaagcacaatcaattgaagtatgcctACATTCCATTGCTTTTGTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130923209 69 + 189454096 ttatttgtgaagccaagtgaagcaaagcacaatcaattgaagtatgcctACATTCCATTGCTTTTGTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34914539 69 - 40319822 ttatttgtgaagccaagtgaagcaaagcacaatcaattgaagtatgcctACATTCCATTGCTTTTGTAG i macNem1.NW_012010911v1 C 0 I 24 s cerAty1.NW_012000798v1 4468605 69 - 9219162 ttatttgtgaagccaagtgaagcaaagcacaatcaattgaagtatgcctACATTCCATTGCTTTTGTAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78993675 65 + 135778131 ttatttgtgaaaccaagtgaagcaaagca----caattgaagtatgcctACATTCCATTGCTTTTGTAG i chlSab2.chr7 C 0 I 45 s manLeu1.NW_012103277v1 2763573 69 - 3013352 ttatttgtgaagccaagtgaagcaaagcacaatcaattgaagtatgcctACATTCCATTGCTCTTGTAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5991943 69 + 8656713 ttatttgtgaagccaagtgaagcaaagcacaatcaattaaagtatgcctACATTCCACTGCTTTTGTAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129420303 69 - 190850796 ttatctgtgaagccaagtaaagtaaagcacaatggttggaagtatgtctATATTCCACTGCATTTATAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6505881 69 - 25294431 ttatctgtgaagccaagtaaagtaaagcacaatagttggaagtatgtctATATTCCACTGCCGTTATAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4060676 69 - 6311556 ttatctgtgaagccaagtaaagtaaagcacaatagttggaagtatgtctATATTCCACTGCCATtatag i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14916282 69 + 15034901 ttatctgtgaagccaagtaaagtaaagcacaatagttggaagtatgtctATATTCCACTGCCTTTATAG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 940716 64 - 3201129 gtatctgagaagggcaagaaggtgaagtgcaaCCCAT--GAGT---TCTGCATTTCATCGCCCTTTTAG i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404066 130 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I a score=25233.000000 s hg38.chr9_KI270719v1_random 43068 5 + 176845 AGTGt s panTro5.chr4 135067948 5 + 194502333 AGTGt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48363 5 - 70559 AGTGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90461948 5 - 115148730 AGTGt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404271 5 + 190429646 CGTGT i rheMac8.chr5 C 0 I 19 s macFas5.chr5 130923278 5 + 189454096 CGTGT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4468674 5 - 9219162 CGTGT i cerAty1.NW_012000798v1 C 0 I 19 s manLeu1.NW_012103277v1 2763642 5 - 3013352 CGTGT i manLeu1.NW_012103277v1 C 0 I 19 s colAng1.NW_012114544v1 5992012 5 + 8656713 TGTGT i colAng1.NW_012114544v1 C 0 I 19 s calJac3.chr3 129420372 5 - 190850796 AGTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6505950 5 - 25294431 ATTGT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4060745 5 - 6311556 attgt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14916351 5 + 15034901 AGTGT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 940780 5 - 3201129 AGTCT i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404066 130 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e chlSab2.chr7 78993740 45 + 135778131 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I a score=27035.000000 s hg38.chr9_KI270719v1_random 43073 16 + 176845 atatagttgtattaca s panTro5.chr4 135067953 16 + 194502333 atatagttgtattaca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48368 16 - 70559 ATATAGTTGTATTACA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90461953 9 - 115148730 aaata-------taca i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 129420377 16 - 190850796 ATATAGTTATATTACA i calJac3.chr3 C 0 I 5 s saiBol1.JH378129 6505955 16 - 25294431 ATATAGTTATATTACG i saiBol1.JH378129 C 0 I 5 s cebCap1.NW_016107420v1 4060750 16 - 6311556 atatagttatattaca i cebCap1.NW_016107420v1 C 0 I 16 s aotNan1.NW_018507635v1 14916356 16 + 15034901 ATATAGTTATATTACA i aotNan1.NW_018507635v1 C 0 I 31 s otoGar3.GL873702 940785 13 - 3201129 ATAAAGTGATGGT--- i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404066 130 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e macFas5.chr5 130923283 0 + 189454096 C e rheMac8.chr5 131404276 19 + 190429646 I a score=1618.000000 s hg38.chr9_KI270719v1_random 43089 12 + 176845 taacatatataa s panTro5.chr4 135067969 12 + 194502333 taacatatataa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48384 12 - 70559 TAACATACATAa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90461962 12 - 115148730 ctctatttatat i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 129420398 1 - 190850796 T----------- i calJac3.chr3 I 5 C 0 s saiBol1.JH378129 6505976 12 - 25294431 TTATGTATATAA i saiBol1.JH378129 I 5 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404066 130 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 940798 0 - 3201129 C e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e cebCap1.NW_016107420v1 4060766 16 - 6311556 I e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e macFas5.chr5 130923283 0 + 189454096 C e rheMac8.chr5 131404276 19 + 190429646 I a score=6672.000000 s hg38.chr9_KI270719v1_random 43101 14 + 176845 tatatatacaaata s panTro5.chr4 135067981 14 + 194502333 tatatatacaaata i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48396 14 - 70559 tatatatacaaata i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90461974 12 - 115148730 tatatat--aaata i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873702 940798 10 - 3201129 ----TATAAAAGCA i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404066 130 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e cebCap1.NW_016107420v1 4060766 16 - 6311556 I e saiBol1.JH378129 6505988 0 - 25294431 C e calJac3.chr3 129420399 0 - 190850796 C e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e macFas5.chr5 130923283 0 + 189454096 C e rheMac8.chr5 131404276 19 + 190429646 I a score=910.000000 s hg38.chr9_KI270719v1_random 43115 1 + 176845 t s panTro5.chr4 135067995 1 + 194502333 t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48410 1 - 70559 t i gorGor5.CYUI01001450v1 C 0 C 0 s ponAbe2.chrUn 4404196 1 + 72422247 t i ponAbe2.chrUn I 130 I 5 s nomLeu3.chr7b 90461986 1 - 115148730 t i nomLeu3.chr7b C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 940808 0 - 3201129 C e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e cebCap1.NW_016107420v1 4060766 16 - 6311556 I e saiBol1.JH378129 6505988 0 - 25294431 C e calJac3.chr3 129420399 0 - 190850796 C e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e macFas5.chr5 130923283 0 + 189454096 C e rheMac8.chr5 131404276 19 + 190429646 I a score=2088.000000 s hg38.chr9_KI270719v1_random 43116 5 + 176845 atata s panTro5.chr4 135067996 5 + 194502333 atatt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48411 5 - 70559 atata i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90461987 5 - 115148730 atata i nomLeu3.chr7b C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404197 5 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 940808 0 - 3201129 C e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e cebCap1.NW_016107420v1 4060766 16 - 6311556 I e saiBol1.JH378129 6505988 0 - 25294431 C e calJac3.chr3 129420399 0 - 190850796 C e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e macFas5.chr5 130923283 0 + 189454096 C e rheMac8.chr5 131404276 19 + 190429646 I a score=-1120.000000 s hg38.chr9_KI270719v1_random 43121 17 + 176845 atata-tata-------------------tttgggta s panTro5.chr4 135068001 36 + 194502333 atata-tatacaaatatatattatatatatttgggta i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48416 17 - 70559 atata-tata-------------------tttgggta i gorGor5.CYUI01001450v1 C 0 C 0 s ponAbe2.chrUn 4404202 18 + 72422247 atatagtata-------------------tttatata i ponAbe2.chrUn I 5 I 1782 s nomLeu3.chr7b 90461992 14 - 115148730 aaata-tata-------------------tt---ata i nomLeu3.chr7b C 0 I 2 s calJac3.chr3 129420399 2 - 190850796 -----------------------------------TA i calJac3.chr3 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e otoGar3.GL873702 940808 0 - 3201129 C e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e cebCap1.NW_016107420v1 4060766 16 - 6311556 I e saiBol1.JH378129 6505988 0 - 25294431 C e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e macFas5.chr5 130923283 0 + 189454096 C e rheMac8.chr5 131404276 19 + 190429646 I a score=7674.000000 s hg38.chr9_KI270719v1_random 43138 56 + 176845 tatgtaatatatattatatatatttgtatatatat-tatacatacatattatata-----------------------------------ca s panTro5.chr4 135068037 54 + 194502333 tatgtaatatatattatatacatttgtatatatat-tacacatatatattgtata------------------------------------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48433 54 - 70559 tatgtaatatatattatatatatttgtatatatat-tatacatatatattatata------------------------------------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462008 90 - 115148730 tatataatatatgttataaatatata-atatatgt-tataaatatataatatatattataaaatatgtttaaaactcctggaaaaatttgta i nomLeu3.chr7b I 2 C 0 s calJac3.chr3 129420401 41 - 190850796 tgtgta--------tatatatatgtgtgtgtgtgtgtgtgtgtgtgtgt------------------------------------------- i calJac3.chr3 C 0 C 0 s otoGar3.GL873702 940808 17 - 3201129 -------------------------GTGTGTATAG-TGTTCAG------------------------------------------------- i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44038555 3937 - 53741614 I e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e cebCap1.NW_016107420v1 4060766 16 - 6311556 I e saiBol1.JH378129 6505988 0 - 25294431 C e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e macFas5.chr5 130923283 0 + 189454096 C e rheMac8.chr5 131404276 19 + 190429646 I a score=4017.000000 s hg38.chr9_KI270719v1_random 43194 32 + 176845 tatatagtatgca------tatatatta--------tacatatata-- s panTro5.chr4 135068091 21 + 194502333 ---------tg--------tatatatta--------tacatatata-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48487 21 - 70559 ---------ca--------tatatagta--------tacatatata-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462098 38 - 115148730 tatatattatatatatttttacatatta--------tacatatata-- i nomLeu3.chr7b C 0 C 0 s canFam3.chr19 44042492 29 - 53741614 -------------------TACATAGTATGTCTGGTTATAGTTATAAA i canFam3.chr19 I 3937 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 940825 0 - 3201129 C e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e cebCap1.NW_016107420v1 4060766 16 - 6311556 I e saiBol1.JH378129 6505988 0 - 25294431 C e calJac3.chr3 129420442 0 - 190850796 C e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e macFas5.chr5 130923283 0 + 189454096 C e rheMac8.chr5 131404276 19 + 190429646 I a score=-4867.000000 s hg38.chr9_KI270719v1_random 43226 14 + 176845 t--tacatatatatat s panTro5.chr4 135068112 14 + 194502333 t--tgtgtgtgtatat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48508 16 - 70559 ttatatatatatatat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462136 14 - 115148730 t--aatatagatatgc i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130923283 14 + 189454096 T--TATTTATGTACAC i macFas5.chr5 C 0 C 0 s calJac3.chr3 129420442 10 - 190850796 ----gtgtgtgtgt-- i calJac3.chr3 C 0 C 0 s canFam3.chr19 44042521 6 - 53741614 ----ACTAAC------ i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 940825 0 - 3201129 C e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e cebCap1.NW_016107420v1 4060766 16 - 6311556 I e saiBol1.JH378129 6505988 0 - 25294431 C e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e rheMac8.chr5 131404276 19 + 190429646 I a score=1093.000000 s hg38.chr9_KI270719v1_random 43240 1 + 176845 a s panTro5.chr4 135068126 1 + 194502333 a i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48524 1 - 70559 a i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462150 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130923297 1 + 189454096 G i macFas5.chr5 C 0 C 0 s calJac3.chr3 129420452 1 - 190850796 g i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4060782 1 - 6311556 a i cebCap1.NW_016107420v1 I 16 C 0 s canFam3.chr19 44042527 1 - 53741614 A i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 940825 0 - 3201129 C e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e saiBol1.JH378129 6505988 0 - 25294431 C e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e rheMac8.chr5 131404276 19 + 190429646 I a score=-1986.000000 s hg38.chr9_KI270719v1_random 43241 1 + 176845 -t s panTro5.chr4 135068127 1 + 194502333 -t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48525 1 - 70559 -t i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462151 1 - 115148730 -t i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130923298 1 + 189454096 -C i macFas5.chr5 C 0 I 3 s calJac3.chr3 129420453 1 - 190850796 -t i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6505988 1 - 25294431 -T i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4060783 1 - 6311556 -t i cebCap1.NW_016107420v1 C 0 C 0 s canFam3.chr19 44042528 1 - 53741614 G- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 940825 0 - 3201129 C e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e colAng1.NW_012114544v1 5992017 19 + 8656713 I e manLeu1.NW_012103277v1 2763647 19 - 3013352 I e chlSab2.chr7 78993740 45 + 135778131 I e cerAty1.NW_012000798v1 4468679 19 - 9219162 I e macNem1.NW_012010911v1 34914608 24 - 40319822 I e rheMac8.chr5 131404276 19 + 190429646 I a score=81258.000000 s hg38.chr9_KI270719v1_random 43242 13 + 176845 atatatTtgatat s panTro5.chr4 135068128 13 + 194502333 atatatTtgttat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48526 13 - 70559 atatatTtgttat i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462152 13 - 115148730 atatatTtgttat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404295 13 + 190429646 ATATATTtgttat i rheMac8.chr5 I 19 C 0 s macFas5.chr5 130923302 13 + 189454096 ATATATTtgttat i macFas5.chr5 I 3 C 0 s macNem1.NW_012010911v1 34914632 13 - 40319822 ATATATTtgttat i macNem1.NW_012010911v1 I 24 C 0 s cerAty1.NW_012000798v1 4468698 13 - 9219162 ATATATTtgttat i cerAty1.NW_012000798v1 I 19 C 0 s manLeu1.NW_012103277v1 2763666 13 - 3013352 ATATATTtgttat i manLeu1.NW_012103277v1 I 19 C 0 s colAng1.NW_012114544v1 5992036 13 + 8656713 ATATATTtgttat i colAng1.NW_012114544v1 I 19 C 0 s calJac3.chr3 129420454 13 - 190850796 gtgtAGTTCTtat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6505989 13 - 25294431 ATATCGTTCTtac i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4060784 13 - 6311556 atatatTTCTtat i cebCap1.NW_016107420v1 C 0 C 0 s canFam3.chr19 44042529 13 - 53741614 ATATTATtgttat i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 940825 0 - 3201129 C e aotNan1.NW_018507635v1 14916372 31 + 15034901 I e chlSab2.chr7 78993740 45 + 135778131 I a score=58821.000000 s hg38.chr9_KI270719v1_random 43255 8 + 176845 ggactgtg s panTro5.chr4 135068141 8 + 194502333 ggactgtg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48539 8 - 70559 ggactgtg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462165 8 - 115148730 ggactgtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404308 8 + 190429646 ggacagca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130923315 8 + 189454096 ggacagca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34914645 8 - 40319822 ggacagca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4468711 8 - 9219162 ggacagca i cerAty1.NW_012000798v1 C 0 C 0 s manLeu1.NW_012103277v1 2763679 8 - 3013352 ggacagca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992049 8 + 8656713 ggacagca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129420467 8 - 190850796 ggactgca i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6506002 8 - 25294431 ggactgca i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4060797 8 - 6311556 ggactgca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14916403 8 + 15034901 ggactgca i aotNan1.NW_018507635v1 I 31 C 0 s otoGar3.GL873702 940825 8 - 3201129 ggactaaa i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44042542 8 - 53741614 gaactgaa i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e chlSab2.chr7 78993740 45 + 135778131 I a score=2909852.000000 s hg38.chr9_KI270719v1_random 43263 330 + 176845 tcttgtttccccaaaattaatata-ttgaagcc--ttaactctcaatgtgttagcatttggaggtgggacctt--tggaag----taattaggtttagatgagcccataaggatggggtcttca--tgatgggattaatg------ctcttacaggaagagaccagagagctaacactttctattcgctatgtacgtacataggaaa-------------------aaggcagccctttgaaagcccagaaga-----------------tgaccct-------------cctcagacttgccaggttcaagaactataagaaataa-atgtctattgttcagaccagc--gcctatcttatttttatatagcagcct---gagcttactaaaacaATTATT s panTro5.chr4 135068149 330 + 194502333 tcttatttccccaaaattaatata-ttgaaggc--ttaactctcaacgtgttagcatttggaggtgggacctt--tggaag----taattaggtttagatgagcccataaggatggggtcttca--tgatgggattagtg------ctcttataggaagataccagagagctaacgctttctattcgctatgtaagtacataggaaa-------------------aagacagccctttgaaagcccagaaga-----------------tgaccct-------------cctcagacttgccaggttcaagaactataagaaataa-atgtctattgttcagactagc--gcctatcttatttttatatagcagcct---gagcttactaaaacaATTATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48547 330 - 70559 tcttgtttccccaaaattaatata-ttgaagcc--ttaactctcaacgtgttagcatttggaggtgggacctt--tggaag----taattaggtttagatgagcccataaggatggggtcttca--tgatgggattagtg------ctcttacaggaagagaccagagagctaacgctttctattcgctatgtacgtacataggaaa-------------------aaggcagccctttgaaagcccagaaga-----------------tgaccct-------------cctcagacttgccaggttcaagaactataagaaataa-atgtctattgttcagaccagc--gcctatcttatttttatatagcagcct---gagcttactaaaacaATTATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462173 330 - 115148730 tcttgtttccccaaaattaatata-ttgaagtc--ttaactctcaatgtgttagcatttggaggtgggacctt--tggaat----taattaggtttagatgagcccataaggatggggtcttca--tgatgggattagtg------ctcttataggaatagaccggagagctaacgctttctattcgctatgtaagtacgcaggaaa-------------------aaggcagccttttgaaagcccagaaaa-----------------cgaccct-------------cctcagacttgccaggttcaagaactataagaaataa-atgtctgttgttcagaccagc--gcctatcttatttttatatagcagcct---gagcttactaaaacaATTATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404316 330 + 190429646 tcttgtttccccaaaattaatata-ttgaagcc--ttaactgtcaatgttttagtatttggaggtggggcctt--tggaag----caattatgtttagatgagctcatgaggatggggtcttca--tgatgggattagtg------ctcttataggaagagaccagagagctaacactttctgttcgctatgtaagcacacaggaaa-------------------agagcagccctttgaaagctgggaata-----------------cgaccct-------------cctcaaacttgccaggtttaagaactctaagaaataa-atgtctattgttcaggccagc--gcctattttatttttacataacagact---gagcttactaaaacaATTATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130923323 330 + 189454096 tcttgtttcccctaaattaatata-ttgaagcc--ttaactgtcaatgttttagtatttggaggtggggcctt--tggaag----caattctgtttagatgagctcatgaggatggggtcttcg--tgatgggattagtg------ctcttataggaagaggccagagagctaacactttctgttcgctatgtaagtacacaggaaa-------------------agagcagccctttgaaagctgggaata-----------------cgaccct-------------cctcaaacttgccaggtttaagaactctaagaaataa-atgtctattgttcaggccagc--gcctgttttatttttacataacagact---gagcttactaaaacaATTATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34914653 330 - 40319822 tcttgtttccccaaaattaatata-ttgaagcc--ttaactgtcaatgttttagtatttggaggtggggcctt--tggaag----caattctgtttagatgagctcatgaggatggggtcttca--tgatgggattagtg------ctcttataggaagagaccagagagctaacactttctgttcgctatgtaagtacacaggaaa-------------------agagcagccctttgaaagctgggaata-----------------cgaccct-------------cctcaaacttgccaggtttaagaactctaagaaataa-atgtctattgttcaggccagc--gcctattttatttttacataacagact---gagcttactaaaacaATTATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4468719 330 - 9219162 tcttgtttccccaaaattaatata-ttgaagcc--ttaattctcaatgttttagtatttggaggtggggcctt--tggaag----caattatgtttagatgagctcatgaggatggggtcttca--tgatgagattagtg------ctcttataggaagagaccagagagctaacactttctgttcactatgtaagtacacaggaaa-------------------agagcagccctttgaaagctgggaata-----------------cgaccct-------------cctcaaacttgccaggttcaagaactctaagaaataa-atgtctattgttcaggccagc--gcctattttatttttacataacagact---gagcttactaaaacaATTATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78993785 330 + 135778131 tcttctttccccaaaattaatata-ttgaagcc--ttaactctcaatgttttagtatttggaggtgggacctt--tggaag----caattacatttagatgagctcatgaggatggggtcttca--tgttgggattagtg------ctcttataggaagagaccagagagctaacactttctgttcgctatgtaagtacacaggaaa-------------------agagcagccctttgaaagctgggaata-----------------cgaccct-------------cctcaaacttgccaggttcaagaactctaagaaataa-atgtctattgttcaggccagc--acctattttatttttgcataacagact---gagcttactaaaacaATTATT i chlSab2.chr7 I 45 C 0 s manLeu1.NW_012103277v1 2763687 330 - 3013352 tcttgtttccccaaaattaatata-ttgaagcc--ttaactctcgatgttttagtatttggaggtggggcctt--tggaag----caattatgtttagatgagctcatgaggatggggtcttca--tgatgggattagtg------ctcttataggaagagaccagagagctaacactttctgttctctatgtaagtacacaggaaa-------------------agagcagccctttgaaagctgggaata-----------------cgaccct-------------cctcaaacttgccaggttcaagaactctaagaaataa-atgtctattgttcaggccagc--gcctattttatttttacataacagact---gagcttactaaaacaATTATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992057 330 + 8656713 tcttgtttccccaaaattaataca-ttgaagcc--ttaactctcaatgtgttagtatttggaggtgggtcctt--tggaag----taattatgtttagatgagctcatgaggatggggtcttca--tgatgggattagtg------cccttataggaagagaccagagagctaacactttctgttcgctatgtaagtacacaggaaa-------------------agagcagccctttgaaagctgggaaaa-----------------cgaccct-------------cctcaaacttgccaggttcaagaactataagaaataa-atgtctattgttcaggccagc--gcctattttatttttgcataacagact---gagcttactaaaacaATTATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129420475 329 - 190850796 tcttgtttccctaaaattcatata-ttgaagcc--ttaactctcaatgtattggtatttggaggtggtacctt--tgcaag----taattaggtttagatgagttcaggaggatggtgtctttg--tgatgagattagtg------ctcttacaggaagagaccagaaagccaatgctttctattcgctatgtaa--aggcaagaaa-------------------aaggcagccctttgaaagcccggaaga-----------------tgaccct-------------cctcgaactttccaggttcaagaactaaaagaaataa-atacctattgtttaagccagc-ggcctatcttatttttatatagcagccc---gagatcactaaaacaTTTATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6506010 327 - 25294431 tcttatttccctaaaattaatata-ttgaagcc--ttaactctcagtgtgctggtatttggaggtagtacctt--tggaag----taattaggtttaggtgagttcaggtggatgaggtcttcg--tgatg-gattagtg------cttctataggaagagaccagaaagctaatgttttctattcgctatgtaa--atgcaagaaa-------------------aaggcagccctttaaaagtccagaaga-----------------tgaccct-------------cctcaaactttcca-gttcaagaactaaaagaaataa-atacctattgtttaggccagc-agcctatcttatttttatatagcagccc---gagattactaaaacaTTTATT i saiBol1.JH378129 C 0 I 4 s cebCap1.NW_016107420v1 4060805 332 - 6311556 tcttgtttccctaaaattaatatatttgaagcc--tttactctcaatgtgcttgtatttggaggtggtacctt--tggaagtaattaattaggtttagatgagttcaggaggatgaggtctttg--tgatgggattagtg------ctcctacatgaagagaccaaaaagctaatgctttctattcactatgtaa--aggcaagaaa-------------------aaagcagccctttgaaagtccagaaga-----------------tgaccct-------------cctcaaactttccaggttcaagaactaaaagaaataa-atacccatcgttcaggccagc-agcc--tcttatttttatatagcagccc---gaGATTGCTAAAACATTTATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14916411 329 + 15034901 tcttgtttccctaaaattaataga-ttgaagcc--ttaactctcaatatgttggtatttggaggtggtacctt--tggaag----taattaggtttagatgagttcaggaggatggggtctttg--tgatgcgattagtg------ctcttataggacgagaccagaaagctaacgctttctattcgctatgtaa--aggcaagaaa-------------------aaggcagcccttcaaaagcccggaaga-----------------tgaccct-------------cctcaaactttccaggttcaagaactaaaagaaataa-atatctattgtttaggccagc-agcctatcttatttttatatagcagcct---gaGATTACTAAAATATTTATT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 940833 324 - 3201129 ttttgtttcctcaaaattcatatg-ttgaaagtggttaacactcaatg-----gtattttcaggcaagacatt--tggaag----taatttagtgtagatgaagttatgaagggggcagcctta--tgatggcat--gga------cctttagcagatgagaccagacagcca--gctttctctccacagtgtgaatataaaacaag-------------------aaggcggtcctctgtaagcgagggaga-----------------caactct-------------cctctaacttctatacctcaagaacttttgagaaata-gtgtctgttatttaagttatc-agtctatggtattttgatgtagcaccct---gagcTTACCATAGTAGTTTTT i otoGar3.GL873702 C 0 I 19 s canFam3.chr19 44042550 386 - 53741614 -ctagtccccccaaaatccatata--tgcagcc--ctaatccccagtctgacaatatttggagatagggccttgaggaaag----taattaaggttaaataaggtcaaagaagtgggatcctcatctgataaaactggtgggttttttctaataggaaaaagaagagacaccagagatgtctctcctcca---aagagcagaggaaatagcacacgtccacagcagaaggaggccatctgcaa--caagaagagatgtctcacaggacactgaccctgatggcactttgatcttggactt-ccagccaacagatctgtgagaaaagagatttctgttgttcagatcatccagtctgtagt-tttggttagggcagccttagaagactaataAAATAGTTATA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=169425.000000 s hg38.chr9_KI270719v1_random 43593 26 + 176845 ---AAGAA-AAAA--------CAGCAAAGCAAACA----AAC s panTro5.chr4 135068479 26 + 194502333 ---ATGAA-AAAA--------CAGCAAGGCAAACA----AAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48877 26 - 70559 ---AAGAA-AAAA--------CAGCAAAGCAAACA----AAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462503 26 - 115148730 ---AAGAA-AAAA--------CAGCAAAGCAAACA----AAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404646 27 + 190429646 ---AAGAA-AAAAG-------CAGCAAAGCAAACA----AAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130923653 27 + 189454096 ---AAGAA-AAAAG-------CAGCAAAGCAAACA----AAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34914983 27 - 40319822 ---AAGAA-AAAAG-------CAGCAAAGCAAACA----AAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469049 27 - 9219162 ---AAGAA-AAAAG-------CAGCAAAGCAAACA----AAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994115 27 + 135778131 ---aagaa-aaaac-------cagcaaagcaaaca----aac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764017 27 - 3013352 ---AAGAA-AAAAG-------CAGCAAAGCAAACA----AAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992387 27 + 8656713 ---AAGAA-AAAAG-------CAGCAAAGCAAACA----AAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129420804 27 - 190850796 ---AAGAACAAAA--------CAGCAAAGCAAACA----ATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6506341 31 - 25294431 ---AAAAAAAAAA--------CACCAAAGCAAACAAACGAAC i saiBol1.JH378129 I 4 C 0 s cebCap1.NW_016107420v1 4061137 26 - 6311556 ---AAGAA-AAAA--------GAGCAAAGCAAACA----AAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14916740 30 + 15034901 ---CAGaa-aaaa--------cagcaaagcaaacaaacaaac i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44042936 36 - 53741614 ATTATGAA-ACTAGTATATATAGTTACAGTATTTA----AA- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1754886 2892 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941157 19 - 3201129 I a score=59874.000000 s hg38.chr9_KI270719v1_random 43619 6 + 176845 AAAAGC s panTro5.chr4 135068505 6 + 194502333 AAAAGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48903 6 - 70559 AAAAGC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462529 6 - 115148730 AAAAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404673 6 + 190429646 AAAAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130923680 6 + 189454096 AAAAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915010 6 - 40319822 AAAAGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469076 6 - 9219162 AAAAGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994142 6 + 135778131 aaaAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764044 6 - 3013352 AAAAGC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992414 6 + 8656713 AAAAGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129420831 6 - 190850796 AAAAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6506372 6 - 25294431 AAAGGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4061163 6 - 6311556 CAAGGC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14916770 6 + 15034901 aaaGGC i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1757778 6 + 5974691 AAAAGC i dasNov3.JH569232 I 2892 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44042972 0 - 53741614 C e otoGar3.GL873702 941157 19 - 3201129 I a score=2485145.000000 s hg38.chr9_KI270719v1_random 43625 259 + 176845 AACTATGTTTAAAACTCCTGGAA---------------AAATAATTTATCTTCTGTGCAGCTGTTTTTT-AAGATCTTCCTTTA-ATGTATTTCCC---------------CTCATTTTTCTTGCG-TCTTATTTGGAGTCTGTAGTAGCATAGTTCTTAATTTGCTTATCAAGTAATTTACATCATATTAAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATGTTATTCACTTGTATTCTTTCCTACTACCCGGAAATGCTTTTGCTGGCAATG s panTro5.chr4 135068511 259 + 194502333 AACTATGTTTAAAACTCCTGGAA---------------AAATAATTTATCTTCTGTGCAGCTGTTTTTT-AAGATTTTCCTTTA-ATGTATTTCCT---------------CTCATTTTTCTTGCA-TCTTATTTGGAGTCTGTAGTAGCATAGTTCTTAATTTGCCTATCAAGTAATTTACATCATGTTAAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATGTTATTCCCTTGTATTCTTTCCTACTACCCGGAAATGCTTTTGCTGGCAATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 48909 259 - 70559 AACTATGTTTAAAACTCCTGGAA---------------AAATAATTTATCTTCTGTGCAGCTGTTTTTT-AAGATTTTCCTTTA-ATGTATTTCCT---------------CTCATTTTTCTTGCG-TCTTATTTGGAGTCTGTAGTAGCATAGTTCTTAATTTGCTTATCAAGTAATTTACATCATGTTAAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATGTTATTCACTTGTATTCTTTCCTACTACCCGGAAATGCTTTTGCTGGCAATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462535 259 - 115148730 AATTATGTTTAAAACTCCTGGAA---------------AAATAATTTATCTTCTGTGCACCTGTTTTTT-AAGATTTTCCTTTA-ATGTATTTCTT---------------CTCATTTTTCTTGCG-TCTTATTTGGAGTCTGTAGTAGCATAGTTCTTAATTTGCTTATCAAGTAATTTACATCATGTTAAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATGTTATTCACTTGTATTCTTTCCTACTACCCGGAAATGCTTTTGCTGGCGATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404679 259 + 190429646 AACTATAGTTAAAACTCTTGGAA---------------AAATAATTTATCTTCTGTGCAGCTGTTTTTA-AAGATTTTCCTTTA-ATGTACTACTT---------------CTCATTTTTCTTGCT-TCTTATTTGGAGTCTGTAGTAGCGTAGTTCTTAATTTGCTTATCAAGTAATTTACATCATGTCGAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATACTATTCACTTGTATTCTTTCCTACTACCCATAAATGCTTTTGCTGGCAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130923686 259 + 189454096 AACTATAGTTAAAACTCTTGGAA---------------AAATAATTTATCTTCTGTGCAGCTGTTTTTA-AAGATTTTCCTTTA-ATGTACTACTT---------------CTCATTTTTCTTGCT-TCTTATTTGGAGTCTGTAGTAGCGTAGTTCTTAATTTGCTTATCAAGTAATTTACATCATGTTGAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATACTATTCACTTGTATTCTTTCCTACTACCCATAAATGCTTTTGCTGGCAATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915016 259 - 40319822 AACTATAGTTAAAACTCTTGGAA---------------AAATAATTTATCTTCTGTGCAGCTGTTTTTA-AAGATTTTCCTTTA-ATGTACTACTT---------------CTCATTTTTCTTGCT-TCTCATTTGGAGTCTGTAGTAGCATAGTTCTTAATTTGCTTATCAAGTAATTTACATCATGTTGAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATACTATTCACTTGTATTCTTTCCTACTACCCATAAATGCTTTTGCTGGCAATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469082 259 - 9219162 AACTATAGTTAAAACTCCTGGAA---------------AAATAATTTATCTTCTGTGCAGCTGTTTTTT-AAGATTTTCCTTTA-ATGTACTACTT---------------CTCATTTTTCTTGCT-TCTTATTTGGAGTCTGTAGTAGCATAGTTCTTAATTTGCTTATCAAGTAATTTACATCATGTTGAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATACTATTCACTTGTATTCTTTCCTACTACCCATAAATGCTTTTGCTGGCAATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994148 259 + 135778131 AACTATAGTTAAAACTCCTGGAA---------------AAATAATTTATCTTCTGTGCAGCTGTTTTTT-AAGATTTTCCTTTA-ATGTACTACTT---------------CTCATTTTTCTTGCT-TCTTATTTGGAGTCTGTAGTAGCATAGTTCTTAATTTGCTTATCAAGTAATTTACATCATGTTAAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATACTTTTCACTTGTATTCTTTCCTACTACCCATAAATGCTTTTGCTGGCAATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764050 239 - 3013352 AACTACAGTTAAAACTCCTGGAA---------------AAATAATTTATCTTCTGTGCAGCTG-----T-AAGATTTTCCTTTA-ATGTACTACTT---------------CTCATTTTTCTTGCT-TCTTATTTGGAGTCTGTAG---------------TTTGCTTATCAAGTAATTTACATCATGTCGAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATACTATTCACTTGTATTCTTTCCTACTACCCATAAATGCTTTTGCTGGCAATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992420 259 + 8656713 AACTATAGTTAAAACTCCTGGAA---------------AAATAATTTATCTTCTGTGCAGCTGTTTTTT-AAGATTTTCCTTTA-ATGTACTACTT---------------CTCATTTTTCTTGCT-TCTTATTTGGAGTCTGTAGTAGCACAGTTCTTAATTTGTTTATCGAGTAACTTACATCATGTTGAACATGAATTTCAACCA----------------GC------------------AAAG------------------AATATTATTAAAACTTCTGGACTAATACTATTTACTTGTATTCTTTCCTACTACCCAGAAATGCTTTTGCTGGCAATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129420837 261 - 190850796 AACTAGAGTTGAAACTCCTGGAA---------------AAATAATTTACCTTCTGTGCAGCTGTTTCTTAAAATTTTTATTTTA-ATACACTATTT---------------TGCATTTTTCTTGCCATCTTATTTAGAGTCTGTAGTTGCATCGTTTTTAATTTGCTTATCAAGTAATTTACATCATGTTAAACATGAATTTCAACCA----------------GC------------------AAGG------------------AATATTATTAAAACATCTGGACTAATATTATTCACTTTTAGTCTTTCCTACTACCCAGAAATGCTTTTGCTGGCAGTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6506378 260 - 25294431 AACTATAGTTGAAACTCCTGGAA---------------AAATAATTTATCTTCAGTGCAGCCGTTTTTT-AAATTTTTCCTTTC-ATGTATTATTT---------------CTCATTTTACTTGCTGTCTTATTTAGAGTCTGTAGTTGCATCGTTTTTAATTTGCTTATCAAGTAATTTACATCATGTTAAACATGAATTTCAAATG----------------GC------------------ATCG------------------AATATTATTAAAACATCTGGACTAATGTTATTCACTTTTAGTCTTTCCTACTACCCAGAAATGCTTTTGCTGGCAATG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4061169 260 - 6311556 AACTGTAGTTGAAACCCCTGGAA---------------AAATAGTTTATCTTCGGTGCAGCTGTTTTTT-AAAATTTTCCTTTA-ATGTATTACTT---------------CTCATTTTTCTTGCTGTCTTATTTAGAGTCTGTAGTGGCATCGTTTTTAATTTGCTTATCAAGTAATTTACATCATGTTAAACATGAATTTCAAATG----------------GC------------------ATAG------------------AATATTATTAAAACATCTGGACTAATGTTATTCACTTTTAGTCTTTCCAACTACCCAGAAGTGCTTTTGCTGGCAATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14916776 256 + 15034901 AACTATAGTTGAAACTCCTGGAA---------------AAATAATTTATCTTCAGTGCAGCTGTTTTTA-AAAATATTCCTTTA-ATGTATTACTT---------------CTTATTTTTCTTGCTGTC----TTAGAGTCTGTAGTTGCATAGTTTTTAATTTGTTTATCAAGTAATTTACATCATGTTAAACATGAATTTCAAATG----------------GC------------------ATAG------------------AATATTATTAAAACATCTGAACTAACGTTATTCACTTTTAGTCTTTCCTACTACCCAGAAATGCTTTTGCTGGCAATG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 941176 287 - 3201129 AATTATAGTTAAAAGACCTGGGAAAGGTTAAATTTGTTAAAGAATTTATCTTCTGAGTTTTTTTTCTTT-AAA--TTTCCTTTATATTTACTACTT---------------CTCATTTTTCTTGCTGCCCCATTTAGAATCTTCAG-----TATATCTCCATGTATGTGTAAAGTAATCTACATCATGGTAAACTTGAATTTCGACCA----------------ATATCCCAGATGCCTGTTAAATAG------------------CATGATATTGAAACTTTTAGACTGTTGCAATTCACTTTTTGTCTTTCCTACTGTATGCTAGGATTCTGACTGCCCATG i otoGar3.GL873702 I 19 C 0 s canFam3.chr19 44042972 304 - 53741614 AAATAGAGTTAAAAAGCCTAGAATAGGTTAACTTTTTAAAAGAATTTCTCATCTGTACAGTTATTTTTT-AAAATTTTCCTTTA-AAGTACTCTTTTTAAATTAATTCTTCCTCCATTGTTTTGCT-GTCCCCTTGGAGTCTGCAGAGGTAGATTTCTCAATTTACTGATTAGGCCAATTCTA--GTACTAAACCTGAATTTCAACCA----------------AG------------------ATGGCCATTGTACGCTAAATACAGTAATATTG-AATTTCTAAACTAATGTTATTCACTTTGTTCCTTTCCTAGTAACAAAAAATGCTCTTACTGCCAATG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1757784 273 + 5974691 -GTTATAGTTTAAAAACCTAGAAACAGTTGAACATCTGAAGGAATTTCT-TTCTGTGCAA--------T-GCCATTTTCCATCACATTTCCTACTT--------------CCTCCCTGTTCTTGCTATACAATTTGGAGTCTA-AGCACTATATATCTACATTATCTTATCAAGAAATTTCTACCA---------TGAATTTTAACTAATGATTGTTGCCTGTTGT------------------ATCA------------------AATAATGTTGATATTTCTGTACTGATATTATATACTGTTTCCTTTTGCCACTAACCCAGAATGTTCTTACTGCCAATG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26315711 5083 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=2412898.000000 s hg38.chr9_KI270719v1_random 43884 195 + 176845 ATTTCTCCTTTGATGTTGTGAAGTTTCGGGCCA-TTGTTAGAGAAACAGGTCCACTTGCCGATTAGCAGGCAGTAGGCTTTGTGACCTAAGTTCAGTAACAGAAAATCATTACTTTCTCTGGCAATTTGATACAACATGCTTCATATATTCCAAAATTCATCAATTTTCTGCTCTGTTGATGTCCTCCTTTATTAT s panTro5.chr4 135068770 195 + 194502333 ATTTCTCCTTTGATATTGTGAAGTTTTGGGCCA-TTGTTAGAGAAACAGGTCCACTTGCCGATTAGCAGGCAGTAGGCTTTGTGACCTAAGTTCAGTAACAGAAAATCATtagtttctctggcaatttgatacaacatgcttcatatattccaaaattcatcaattttctggtctgttgatgtcctcctttattat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49168 194 - 70559 ATTTCTCCTTTGATGTTGTGAAGTTTTGGGCCA-TTGTTAGAGAAACAGGTCCACTTG-CGATTAGCAGGCAGTAGGCTTTGTGACCTAAGTTCAGTAACAGAAAATCATTACTTTCTCTGGCAATTTGATACAACATGCTTCATATATTCCAAAATTCATCAATTTTCTGCTCTGTTGATGTCCTCCTTTATTAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462794 195 - 115148730 ATTTCTCCTTTCATATTGTGAAGTTTCGGGCCA-TTCTTAGAGAAACAGGTCCACTTGCCGATTAGCAGGCAGTAGGCTTTGTGACCTAAGTTCAGTAACAGAAAATCTTTAGTTTCTCTGGCAATTTGATACAACATGCTTCATATATTCCAAAAGTCATCAATTTTCTGGTCGGTTGATGTCCTCCTTTATTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131404938 195 + 190429646 ATTTCTTCTTTGATATTGTGAAGTTTCGGGCCA-TTCTTAGAGAAAGAGGTCCACTTGCCGATTAGCAGGCAGTAGGCTTTGTGACTTAAGTTCAGTAACAGAAAATCATtagtttctctggcaattcgatacaacatgcttcatatattccaaaattcatcaattttctggtctgttgatgtcctcctttattat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130923945 195 + 189454096 ATTTCTTCTTTGATATTGTGAAGTTTCGGGCCA-TTCTTAGAGAAAGAGGTCCACTTGCCGATTAGCAGGCAGTAGGCTTTGTGACTTAAGTTCAGTAACAGAAAATCATtagtttctctggcaattcgatacaacatgcttcatatattccaaaattcatcaattttctggtctgttgatgtcctcctttattat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915275 195 - 40319822 ATTTCTTCTTTGATATTGTGAAGTTTCGGGCCA-TTCTTAGAGAAAGAGGTCCACTTGCCGATTAGCAGGCAGTAGGCTTTGTGACTTAAGTTCAGTAACAGAAAATCATtagtttctctggcaattcgatacaacatgcttcatatattccaaaattcatcaattttctggtctgttgatgtcctcctttattat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469341 195 - 9219162 ATTTCTTCTTTGATATTGTGAAGTTTCGGGCCA-TTCTTAGAGAAAGAGGTCCACTTGCCGATTAACAGGCAGTAGGCTTTGTGACTTAAGTTCAGTAACAGAAAATCATtagtttctctggcaattcgatacaacatgcttcatatattccaaaattcatcaattttctggtctgttgatgtcctcctttattat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994407 195 + 135778131 ATTTCTTCTTTGATATTGTGAAGTTTCGGGCCA-TTCTTAGAGAAAGAGGTCCACTTGCCGATTAGCAGGCAGTAGGCTTTGTGACTTAAGTTCAGTAACAGAAAATCATtagtttctctggcaattcgatacaacatgcttcatatattccaaaattcatcaattttctggtctgttgatgtcctcctttattat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764289 195 - 3013352 ATTTCTTCTTTGATATTGTGAAGTTTCGGGCCA-TTCTTAGAGAAAGAGGTCCACTTGCCGATTAGCAGGCAGTAGGCTTTGTGACTTAAGTTCAGTAACAGAAAATCATtagtttctctggcaattcgatacaacatgcttcatatattccaaaattcatcaattttctggtctgttgatgtcctcctttattat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992679 195 + 8656713 ATTTCTTCTTAGATACTGTGAAGTTTCAGGCCA-TTCTTAGAGAAACAGGTCCACTTGCCGATTAGCAGGCAGTAGGCTTTGTGATCTAAGTTCAGTAACAGAAAACCATtagtttctctggcaatttgatacaacatgcttcatatattccaaaattcatcaattttctggtctgttgatgtcctcctttattat i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421098 195 - 190850796 ATTTCTCCTTTGATATTGTGAAGTTTATAGCCA-TTCTTAGAGACACAGGTCTACTTGCCGATTAGCAGGCATTAGGCTTTGTGACCTAAGTTCTGTAACAGAAAATGATGACTTTCTCTGGCAGTTCGATACAACATGCTTCATATATTCCAAAATTTATCAATTTTCTGGTCTGTTGATGTCCTCCTTTATTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6506638 195 - 25294431 ATTTCTCCTTTGATATTGTGAAGTTTATAGCCA-TTCTTAGAAACACAGGGCTACTTGCCGATTAGCAGGCATTGGGCTTTGTGACCTAAGTTCTGTAACAGAAAATGATtagtttctctagcaattccatataacatgcttcatatattccaaaacttatcaattttctggtctgttgatgtcctcctttattat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4061429 195 - 6311556 ATTTCTCCTTTGATATTGTGAAGCTTATAGCCA-TTCTTAGAAACACAGGCCTACTTGCCAATTAGCAGGCATTAGGCTTTGTGACCTAAGTGCTGTAACAGAAAATGATTAGTTTCTCTAGGAATTCGATACAACATGCTTCATATATTCCAAAATTTATCAATTTTCTGGTCTGTTGATGTCCTCCTTTATTAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917032 194 + 15034901 ATTTCTCCTTTGATATTGTGAAGTTTATAGCCA-TTCTTAGAGACACAGGTCTACTTGCC-ATTAGCAGGCATTAGGCTTTGTGACCTAAGTTCTGTAACAGAAAATGATtagtttctctggcaattcgatacaacatgcttcatatattccaaaatctatcaattttctggtctgttgatgtcctcctttattat i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26320794 195 - 93316391 ATTTCTCCTTTGACATTGTGAACTTTCTGACCA-TCCTTAGAAAGACATGTTCACTTGCTGATTAGCAGGCAGTAGGCTCCATGACCTAAGTTCAGTAACAGAAAATGAAtagtttctctgccaatttgatacaacatgcttcatctattttaaaattcatcaattttctggtctgttgatgtccttctttattat i micMur3.chr14 I 5083 I 24 s otoGar3.GL873702 941463 195 - 3201129 ATTTATCCTTTGATATTGTGAACTTTCTGACCA-TTCTTACAGAGAAAAGTTCACTTGCCAATTAGCAGGCAGTGGGCTTCATGACCCAAGTTCAGGAACAGAAAATAAGTAGTTTCTTTGGCAATTTGATACAACATGCTTCGTCTACTTTAAAATTCATCAATTTTCTGGTCTGTTGATGTTCTTTCTTATTTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44043276 183 - 53741614 ATCTCTC---TGATATTGTACAATTTGGGGGC--TGCT--------CATGACCACTTGCCAATTAGCAGGCATCAGGCTTTGTGACCTAAATTCAGTAACAGAAAATGATTAGCTTAAAATGCAATTGGATAAAATATGCTTCATCTATTCCAAAATTTATAAATTTTCTGGTCTGCTGATGTCATTCTTTATTAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758057 171 + 5974691 ACATCACTTCTGATATTGGAAAGTTTTGAAGCAGCACCTAGAGAAACATGTCCACTCCCTAGTTAG-------TAGACCCAGTGACCTAAGCCCACTATCAGAAAATGATTAGTTTCTCTG-----------------ACTTCATCTATACCAAAATTTATAAATTTCCTGGTTTACTCATAGCAGTC-TTATTAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=237449.000000 s hg38.chr9_KI270719v1_random 44079 22 + 176845 GTTAAAGAATTGCCACAGTATA s panTro5.chr4 135068965 22 + 194502333 gttaaagagttgctacagtATA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49362 22 - 70559 GTTAAAGAGTTGCCACAGTATA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90462989 22 - 115148730 GTTAAAGAGTTGCCACAGTCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405133 22 + 190429646 gttaaagagttgccacggtctA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924140 22 + 189454096 gttaaagagttgccacggtctA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915470 22 - 40319822 gttaaagagttaccacggtctA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469536 22 - 9219162 gttaaagagttgccacggtctA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994602 22 + 135778131 gttaaagagttgccacggtctA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764484 22 - 3013352 gttaaagagttgccacggtctA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992874 22 + 8656713 gttaaagagttgccacagtctA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421293 22 - 190850796 GTTCAAGAGTTGCCACAGTCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6506833 22 - 25294431 gttcaagagttgccacagtcta i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4061624 22 - 6311556 GTTCAAGAGTTGCCACAGTCTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917226 22 + 15034901 gttcaagagttgccacagtcta i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 941658 22 - 3201129 TTTCAGGACTTGCCATAGCCTA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44043459 22 - 53741614 TTTTAGGAGATGACACAGTTTG i canFam3.chr19 C 0 I 4 s dasNov3.JH569232 1758228 22 + 5974691 TTTCAAGAGATGCCACACTCTA i dasNov3.JH569232 C 0 I 4 e micMur3.chr14 26320989 24 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=636899.000000 s hg38.chr9_KI270719v1_random 44101 58 + 176845 GTTTATTCATAATGCTATTTTCAGTTGAATTACTAGAGCTCCACTTTAGCATTTTAA-A s panTro5.chr4 135068987 58 + 194502333 GTTTATTCATAATGTTATTTTCAGCTGAATTACTAGAGCTCCACTTTAGCATTTTAA-A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49384 58 - 70559 GTTTATTCATAATGCTATTTTCAGTTGAATTACTAGAGCTCCACTTTAGCATTTTAA-A i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463011 58 - 115148730 GTTTATTCATAATGCTATTTTCAGTTGAATTACTAGAGCTCCACTTTAGCATTTTAA-A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405155 58 + 190429646 GTTTATTCATAATGCTATTTTCATTTGAATTACTAGAGCTTCACTTCAGCATTTTAA-A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924162 58 + 189454096 GTTTATTCATAATGCTATTTTCATTTGAATTACTAGAGCTTCACTTCAGCATTTTAA-A i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915492 58 - 40319822 GTTTATTCATAATGCTATTTTCATTTGAATTACTAGAGCTTCACTTCAGCATTTTAA-A i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469558 58 - 9219162 GTTTATTCATAATGCTATTTTCAGTTGAATTACTAGAGCTTCACTTCAGCATTTTAA-A i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994624 58 + 135778131 GTTTATTCATAACGCTATTTTCAGTTGAATTACTAGAGCTTCACTTCAGCATTTTAA-A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764506 58 - 3013352 GTTTATTCATAATGCTATTTTCAGTTGAATTACTAGAGCTTCACTTCAGCATTTTAA-A i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992896 58 + 8656713 GTTTATTCATAATGCTATTTTCAGTTGAATTACTAGAGCTTCACTTCAGCATTTGAA-A i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421315 57 - 190850796 GTTTATTCATAAAGCTATTTTCAGATGAATTACTAGAGCTCTACTTTAGGATTTTAA-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6506855 57 - 25294431 gtttattcgtaaagttattttcagtcGAATCACTAGAGCTCCACTTTAGCATTTTAA-- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4061646 57 - 6311556 GTTTATTCGTAAAGCTATTTTCAGTTGAATTACTAGAGCTCCTCTTTAGCATTTTAA-- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917248 58 + 15034901 gtttattcataaaactattttCAGTTGAATTACTAGAGCTCTACTTTAGCATTTTAAA- i aotNan1.NW_018507635v1 C 0 I 25 s micMur3.chr14 26321013 58 - 93316391 GTTTATTCTTAATGTCATTTCCAGTTGAACTATTACAGCTGCACATTGGCAATTTAA-A i micMur3.chr14 I 24 C 0 s otoGar3.GL873702 941680 58 - 3201129 TTTTGTTCTTAATGTTGTTTTCAGTTGAATTATCAGAGCTGCACATTGGCATTTTAA-A i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44043485 45 - 53741614 GCTTATCTGCAATGCTATTT-CAGTAGAATTGTTAGAA------------ATTTTGA-A i canFam3.chr19 I 4 C 0 s dasNov3.JH569232 1758254 55 + 5974691 GTTTATCCTTA---CTATTATCATTAGAATTTTTGAAAATGCACTTTGGCATTTTGA-A i dasNov3.JH569232 I 4 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=112875.000000 s hg38.chr9_KI270719v1_random 44159 9 + 176845 ATCATATTA s panTro5.chr4 135069045 9 + 194502333 ATCATATTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49442 9 - 70559 ATCATATTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463069 9 - 115148730 ATCATATTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405213 9 + 190429646 ATCATATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924220 9 + 189454096 ATCATATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915550 9 - 40319822 ATCATATTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469616 9 - 9219162 ATCATATTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994682 9 + 135778131 ATCATATTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764564 9 - 3013352 ATCATATTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992954 9 + 8656713 ATCATATTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421372 9 - 190850796 ACCATATTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6506912 9 - 25294431 ACCATATTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4061703 9 - 6311556 ACCATATTA i cebCap1.NW_016107420v1 C 0 C 0 s micMur3.chr14 26321071 9 - 93316391 ATCATATTA i micMur3.chr14 C 0 I 125 s otoGar3.GL873702 941738 9 - 3201129 GTCATATTA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44043530 9 - 53741614 ACCATATTA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758309 9 + 5974691 ACCATATTG i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e aotNan1.NW_018507635v1 14917306 25 + 15034901 I a score=62945.000000 s hg38.chr9_KI270719v1_random 44168 16 + 176845 TCGCATG--TTT-----ATTTCC s panTro5.chr4 135069054 14 + 194502333 TCAC--G--TTT-----ATTTCC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49451 16 - 70559 TCGCATG--TTT-----ATTTCC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463078 18 - 115148730 TCGCATGTTTTT-----ATTTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405222 18 + 190429646 TTGCATGTTTTT-----ATTTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924229 18 + 189454096 TTGCATGTTTTT-----ATTTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915559 18 - 40319822 TTGCATGTTTTT-----ATTTCC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469625 18 - 9219162 TTGCATGTTTTT-----ATTTCC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994691 18 + 135778131 TTGCATGTTTTT-----ATTTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764573 18 - 3013352 TTGCATGTTTTT-----ATTTCC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992963 18 + 8656713 TTGCATGTTTTT-----ATTTCC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421381 13 - 190850796 TTG-----TTTT-----CCCCCC i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6506921 16 - 25294431 TTG--TGTTTTT-----TTCCCC i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4061712 15 - 6311556 TTG---CTTTTT-----TCCCCC i cebCap1.NW_016107420v1 C 0 I 1 s otoGar3.GL873702 941747 19 - 3201129 ----CTGTCTTTTAAAAATTTCG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44043539 13 - 53741614 CTGCCCTTTTTT-----A----- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758318 18 + 5974691 CCACTTGAATTT-----ATTTCC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321080 125 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e aotNan1.NW_018507635v1 14917306 25 + 15034901 I a score=1083258.000000 s hg38.chr9_KI270719v1_random 44184 109 + 176845 AAATTAACAGGGCAATAAAAATCATCTCTT--AAAAATCAGGGGTATCAGTATTCATCTCTTTTCATGTAAAAATA-TTAAAAAATTAGAAGTGAAATATCACAGAAGATAT s panTro5.chr4 135069068 109 + 194502333 AAATTAACAGGGCAATAAAAATCCTCTCTT--AAAAATCGGGGATATAAGTATTCATCTCTTTTTATGTAAAAATA-TTAAAAAATTAGAAGTGAAATATCACAGAAGATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49467 109 - 70559 AAATTAACAGGGCAATAAAAATCCTCTCTT--AAAAATCAGGGATATCAGTATTCATCTCTTTTTATGTAAAAATA-TTAAAAAATTAGAAGTGAAATATCACAGAAGATAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463096 108 - 115148730 AAATTAACAGGGCAATAAAAATCCTCTCTT--AAAAATCAGGGATATCAGGATTCGTCTCTTTTTATGTAAAAATA-TTAAAAAATTAGAAGTGAAATATCACAGAAGATA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405240 110 + 190429646 AAATTAACAGGGCAATAAAAATCCTCTCTT--ACAAATCAGGGATATCAGTTTTCGTCTCTTTTTATGTAAAAATATTTAAAAAATCAGAAGTGAAATATCACAGAAGATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924247 110 + 189454096 AAATTAACAGGGCAATAAAAATCCTCTCTT--ACAAATCAGGGATATCAGTTTTCGTCTCTTTTTATGTAAAAATATTTAAAAAATCAGAAGTGAAATATCACAGAAGATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915577 110 - 40319822 AAATTAACAGGGCAATAAAAATCCTCTCTT--ACAAATCAGGGATATCAGTTTTCGTCTCTTTTTATGTAAAAATATTTAAAAAATCAGAAGTGAAATATCACAGAAGATAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469643 110 - 9219162 AAATTAACAGGGCAATAAAAATCCTCTCTT--ACAAATCAGGGATATCAGTTTTCATCTCTTTTTATGTAAAAATATTTAAAAAATCAGAAGTGAAATATCACAGAAGATAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994709 110 + 135778131 AAATTAACAGGGCAATAAAAATCCTCTCTT--ACAAATCAGGGATATCAGTTTTCGTCTCTTTTTATGTAAAAATATTTAAAAAATCAGAAGTGAAATATCACGGAAGATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764591 110 - 3013352 AAATTAACAGGGCAATAAAAATCCTCTCTT--ACAAATCAGGGATATCAGTTTTCGTCTCTTTTTATGTAAAAATATTTAAAAAATCAGAAGTGAAATATCACAGAAGATAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5992981 110 + 8656713 AAATTAACAGGGCAATAAAAATCCTCTCTT--ACAAATCAGGGATATCAGTTTTCATCTCTTTTTATGTAAAAATATTTAAAAAATCAGAAGTGAAATATCACAGAAGATAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421395 109 - 190850796 AAATTAATAGGACGATAAAAATCCTCTCTT--AAAAATCAGGGATATTAGTATTAGTCTCTTTTTATGTAAAAATA-CTACAAAATTAGAAGTGAAGTATCATGGAAGATAT i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6506938 109 - 25294431 AAGTTAATAGGACAATAAAAATCTTCTCTT--AAAAATCAGGGATATTAGTATTAGTCTCTTTTTATGTAAAAATA-CTACAAAATTAGAAGTGAAGTATCATGGAAGATAT i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4061728 109 - 6311556 AAATTAATAGGACAATAAAAACCCTCTCTT--AAAAATCAGGGATATTAGTATTAGTCTCTTTTTATGTAAAAATA-TTACAAAATTAGAAGTGAAGTATCATGGAAGATAT i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14917331 109 + 15034901 AAATTTATAGGACAATAAAAATCCTCTCTT--AAAAATCAGGGATATTAGTATTAGTCTCTTTTTATGTAAAAATA-CTACAAAATTAGGAGTGAAGTATCACGGAAGATAT i aotNan1.NW_018507635v1 I 25 C 0 s otoGar3.GL873702 941766 108 - 3201129 AATTTAGCAGGATAACGAAGTGTCTCTTTG--AAAAATCAAAGATATCATTGTTTGTGTCCTTTTATATGAAAATA-CTA-AATATTAGAAGTAAAAGGTAGAGGAATATAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44043552 103 - 53741614 ATTTTAGGAGGATCATGAAGG-CCTCTCTT--ATAAATCAG----AATATTATTTGTTTCCTTCTAGATGAAAATG-CTA-AAAACTGGAAGCAAAAGACAGAGGAAGACAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758336 107 + 5974691 AAAATACTAGAACTATAAAAG-CTTCTCTTAAAAAAATCAGAGATATC--TTTGTGTCTCTTTCTAAATGAAAACA-TTA-AACATTGGAAATGAGAGATACAGGAAGATAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321080 125 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=502387.000000 s hg38.chr9_KI270719v1_random 44293 50 + 176845 TTTAAATATGAAG-ACAAATAATGAAATAAGGAGAATTTTAAAAGCCAAAT s panTro5.chr4 135069177 50 + 194502333 TTTAAATATGAAG-ACAAATAATGAAATAAGGAGAATTTTAAAAGCCAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49576 50 - 70559 TTTAAATATGAAG-ACAAATAATGAAATAAGGAGAATTTTAAAAGCCAAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463204 50 - 115148730 TTAGAATATGAAG-ACAAATAATGAAATAAGGAGAATTTTAAAAGCCAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405350 50 + 190429646 TTTAAATATGAAG-ACAAATAATTAAATCAGGAGAATTTTAAAAGCCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924357 50 + 189454096 TTTAAATATGAAG-ACAAATAATTAAATCAGGAGAATTTTAAAAGCCAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915687 50 - 40319822 TTTAAATATGAAG-ACAAATAATTAAATCAGGAGAATTTTAAAAGCCAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469753 50 - 9219162 TTTAAATATGAAG-ACAAATAATTAAATCAGGAGAATTTTAAAAGCCAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994819 50 + 135778131 TTTAAATATGAAG-ACAAATAATTAAATCAGGAGAATTTTAAAAGCCAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764701 50 - 3013352 TTTAAATATGAAG-ACAAATAATTAAATCAGGAGAATTTTAAAAGCCAAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993091 50 + 8656713 TTTAAATATAAAG-ACAAATAATTAAATGAGGAGAATTTTAAAAGCCAAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421504 43 - 190850796 TTTAAATATGAAG-AC----AATGAAAT---AAGAATTTTAAAAGCCAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507047 46 - 25294431 TTTAAATATGAAG-AC----AATGAAATAAGAAGAATTTTAAAAGCCAAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4061837 43 - 6311556 TTTAAATATGAAG-AC----AATGAAAT---AAGAATTTTAAAAGCCAAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917440 43 + 15034901 TTTAAATATGAAG-AC----AATGAAAT---AAGAATTTTAAAAGCCAAAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26321205 50 - 93316391 TTTAAATATGAAG-AAAAATAATAAAATAAGTAGGACTTAAAAAGCTAAAT i micMur3.chr14 I 125 C 0 s otoGar3.GL873702 941874 50 - 3201129 -TTTAATATGAAGAAAAAATAATAAAACAAAGCAGATTTTAAAAGTAAGAT i otoGar3.GL873702 C 0 M 565 s canFam3.chr19 44043655 49 - 53741614 TTTAAGTAAGAAG-GTAAATAATATAATAAGGAAGA-TGAAAAAGCCAAAT i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1758443 45 + 5974691 TTTGAATAAGACG-ACAAATCATAGAATAAGGAGCA---TAAAATGTAT-- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=734420.000000 s hg38.chr9_KI270719v1_random 44343 70 + 176845 ATTTTGGATCAGAGTAAGAAGTTAGTGGTAAAAGATAAAGGTTATCCAACAACCTTTCGCAAATGAAGCC---- s panTro5.chr4 135069227 70 + 194502333 ATTTTGGATCAGAGTAAGAAGTTAGGGGTAAAAGATAAAGGTTATCCAACAACCTTTTGCAAATGAAGCC---- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49626 70 - 70559 ATTTTGGATCAGAGTAAGAAGTTAGTGGTAAAAGATAAAGGTTATCCAACAACCTTTTGCAAATGAAGCC---- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463254 69 - 115148730 ATTTTGGATCAGAGTAAGAAGTTACTGG-AAAAGATAAAGGTTATCCAACAACCTTTTGCAAATGAAGCC---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405400 70 + 190429646 ATTTTGGATCAGAATAAGAAGTTGCTGGTAAAAGATAAAGGTTATCCAACAGACTTTTTCCAATGAAGCC---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924407 70 + 189454096 ATTTTGGATCAGAATAAGAAGTTGCTGGTAAAAGATAAAGGTTATCCAACAGACTTTTTCCAATGAAGCC---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915737 70 - 40319822 ATTTTGGATCAGAATAAGAAGTTGCTGGTAAAAGATAAAGGTTATCCAACAGACTTTTTCCAATGAAGCC---- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469803 70 - 9219162 ATTTTGGATCGGAATAAGAAGTTGCTGGTAAAAGATAAAGGTTATCCAACAGCCTTTTTCCAATGAAGCC---- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994869 70 + 135778131 ATTTTGGATCAGAATAAGAAGTTGCTGGTAAAAGATAAAGGTTATCCAACAGCCTTTTTCAAATGAAGCC---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764751 70 - 3013352 ATTTTGGATCGGAATAAGAAGTTGCTGGTAAAAGATAAAGGTTATCCAACAGCCTTTTTCCAATGAAGCC---- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993141 70 + 8656713 ATTTTGGATCAGAATAAGAAGTTGCTGGTAAAAGAGAAAGGTTATCCAACAGCCTTTTTCAAATGAAGCC---- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421547 69 - 190850796 A-TTTGATTCAGAGTAAGAAGTTACTGGTAAAAGATAAAGGTTATCCAACAATCTTTTGCAAATGAAGCC---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507093 70 - 25294431 ATTTTAATTCAGAGTAAGAAGTTACTGGTAAAAGATAAAGGTTATCTAACAACCTTTTGCAAATGAAGCC---- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4061880 70 - 6311556 ATTTTGATTCAGAGTAAGAAGTTACTGGTAGAAGATAAAGGTTATCCAACAACCTTTTGCAAATGAAGCC---- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917483 70 + 15034901 ATTTTGATTCAGAGTAAGAAGTTACTGGTAAAAGATAAAGGTTATCCAACAACCTTTTGCAAATGAAGCC---- i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26321255 69 - 93316391 CTTTTCAATCAGGGTAAGAAGTTATTGGTAAAGGATGAAGGCTATCCCA-AACCCTTTGCAAATGAAGCC---- i micMur3.chr14 C 0 I 82 s canFam3.chr19 44043705 69 - 53741614 ATTTTAG-TCTTGGTAAGAAATTATTGATAAAGGATGGTAGTTAGTCAGTGGCCCTTTGCAAATGAAGCC---- i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1758488 74 + 5974691 CTTTTCAGGAAGGATAAGGAGTTACTGGTAAAGGTTTGAGACAATCCAACAACCTTTTGCAGGTGAAGCTTTTT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=920580.000000 s hg38.chr9_KI270719v1_random 44413 104 + 176845 AAAAAAGTAGGTTTGCGCAACACTGAATAACTAAAATTACAACTCTTTTATATTTCATT-AAAAAA-CATGCCCTTTTTCAAAAAGTCAGATCGGTTTAATCACAC s panTro5.chr4 135069297 104 + 194502333 AAAAAAGTAGGTTTGTGCAACAGTGAATAACTAAAATTACAACTCTTTTATATTTCATT-AAAAAA-CATGCCCTTTTTCAAAATGTCAGATCGGTTTCATCACAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49696 104 - 70559 AAAAAAGTAGGTTTGTGCAACAGTGAATAACTAAAATTACAACTCTTTTATATTTCATT-AAAAAA-CATGCCCTTTTTCAAAATGTCAGATCGGTTTAATCACAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463323 105 - 115148730 AAAAAAGTAGGTTCGTGCAACAGTGAATAACTAAAGTTACAACTCTTTCATATTTCATT-AAAAAATCATGCCCTTTTTCAAAATGTCAGATCAGTTTCATCACAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405470 96 + 190429646 --------AGGTTTGTTCAACAGTGAATAACTAAAATTACAACTCTTCTATATTTCATT-AAAAAT-CATGTCCTTTTTCAAAACATCAGATCAGTTTCATCACAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924477 96 + 189454096 --------AGGTTTGTTCAACAGTGAATAACTAAAATTACAACTCTTCTATATTTCATT-AAAAAT-CATGCCCTTTTTCAAAACATCAGATCAGTTTCATCACAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915807 96 - 40319822 --------AGGTTTGTTCAACAGTGAATAACTAAAATTACAACTCTTCTATATTTCATT-AAAAAT-CATGCCCTTTTTCAAAACATCAGATCAGTTTCATCACAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469873 96 - 9219162 --------AGGTTTGTTCAACAGTGAATAACTAAAATTACAACTCTTCTATATTTCATT-AAAAAT-CATGCCCTTTTTCAAAACATCAGATCAGTTTCATCACAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78994939 96 + 135778131 --------AGGTTTGTTCAACAGTGAATAACTAAAATTACAACTCTTCTATATTTCATT-AAAAAT-CATGCCCTTTTTCAAAACATCAGATCAGTTTCATCACAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764821 96 - 3013352 --------AGGTTTGTTCAACAGTGAATAACTAAAATTACAACTCTTCTATATTTCATT-AAAAAT-CATGCCCTTTTTCAAAACATCAGATCAGTTTCATCACAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993211 97 + 8656713 --------AGGTTTGTGCAACAGTGAATAACTAAAATTACAACTCTTCTATATTTCATTAAAAAAT-CATGCCTTTTTTCAAAACATCAGATCAGTTTCATCACAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421616 104 - 190850796 -AAAAAGTAGGTTTGTGCAACAGTGAATAACTAAAATTACAACTCCTCTATATTTCATTTAAAAAT-CATGCCCTTTTTCAAAATGTCAGATCAGTTGCATCACAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507163 104 - 25294431 -AAAAAGTAGGTTTGCGCAACAGTGTATAACTAAAATTACAACTCTTCTATATTTCATTAAAAAAT-CATGCCCTTTTTCAAAATGTCAGATCAGTTTCATCACAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4061950 104 - 6311556 -AAAAAGTAAGTTTGTGCAACAGTGAATAACTAAAATTACAACTCTTCTATATTTCATTAAAAAAT-CATGCCCTTTTTCAAAATGTCAGATCAGTTTCATCACAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917553 104 + 15034901 -AAAAAGTAGGCTTGTGCAACAGTGAATAACTAAAATTACAACTCTTCTATATTTCATTAAAAAAT-CATGCCCTTTTTCAAAATGTCAGATCAGTTTCATCACAC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44043774 93 - 53741614 ---AAAGTGACTTTGTTCAGTGGT-AATAAGTGAAATGATAACTTTGTTATATTTTATG-CAAAAA-AGTGTCTTTAATTGAAACAGCCAATCAGTTCT------- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758562 99 + 5974691 --AAAACAGGGTATGTTCAGTGGTGAGTA----AAGTTACAATTCTGCTATATTTCATTCAGAAAT-CATTCCTTTTATTGAAATGTCAAACCAGTTTTATTATAC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321324 82 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=859832.000000 s hg38.chr9_KI270719v1_random 44517 79 + 176845 CATAAAATTA-TTTACCCAAAGTTAAGGAAAAATAGCATGCTTTCATATAAGTAGAAA--ATTTAAATACACAATTGATATT s panTro5.chr4 135069401 79 + 194502333 CATAAAATTA-TTTACCCAAAGTTAAGGAAAAATAGCATGCTGTCATATAAGTAGAAA--ATTTAAATATACAATTGATATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 49800 79 - 70559 CATAAAATTA-TTTACCCAAAGTTAAGGAAAAATAGCATGCTGTCATATAAGTAGAAA--ATTTAAATGCACAATTGATATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463428 79 - 115148730 CATAAAATTA-TTTACCCAAAGTTAAGGAAAAATAGCATGTTGTCATATAAGTAGAAA--ATTTAAATACATAATTGATATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405566 79 + 190429646 CATAAAATTA-TTTACCCAAAGTTATGGAAAAATAGCATTTTGTCATATAAGTAGAAA--ATTTAAATACACAATTGATATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924573 79 + 189454096 CATAAAATTA-TTTACCCAAAGTTATGGAAAAATAGCATTTTGTCATATAAGTAGAAA--ATTTAAATACACAATTGATATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34915903 79 - 40319822 CATAAAATTA-TTTACCCAAAGTTATGGAAAAATAGCATTTTGTCATATAAGTAGAAA--ATTTAAATACACAATTGATATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4469969 79 - 9219162 CATAAAATTA-TTTACCCAAAGTTACGGAAAAATAGCATTTTGTCATATAAGTAGAAA--ATTTAAATACACAATTGATATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78995035 79 + 135778131 CATAAAATTA-TTTACCCAAAGTTACGGAAAAATAGCATTTTGTCATAAAAGTAGAAA--ATTTAAATACACAATTGATATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2764917 79 - 3013352 CATAAAATTA-TTTACCCAAAGTTATGGAAAAATAGCATTTTGTCATATAAGTAGAAA--ATTTAAATACACAATTGATATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993308 79 + 8656713 CATAAAATTA-TTTACCCAAAGTTACGGAAAAATAGCATTTTGTCATACAAGTAGAAA--ATTTAAATACACAACTGATATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421720 79 - 190850796 CATAAAATTA-TTTACTCCAAGTTAAGGAAAAAGAGCATTTTATCATGTAAATAGAAA--ATTTAAACACACAATTGATACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507267 79 - 25294431 CATAAAATTA-TTTACCCCAAGTTAAGGAAAAATAGCATTTTATCATTCAAGTAGAAA--ATTTAAACACACAATTGATATC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062054 79 - 6311556 CATAAAATTA-TTTACCCCAAGTTAAGGAAAAATAGCATGTTATCATGTAAGTAGAAA--ATTTAAATACACAATTGATATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917657 79 + 15034901 TATAAAATTA-TTTACCCCAAGTTAAGGAAAAATAGCATTTTATCATGTAAGTAGAAA--ATTTAAATACACAATTGATATT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26321406 79 - 93316391 CATAAAATTG-TTGAGCCAAAGTTAAGGAAAAATAGCATTTTATCATGAAAGTAGAAA--ATAAAAATATACAATTGATATT i micMur3.chr14 I 82 I 288 s canFam3.chr19 44043867 81 - 53741614 CTTAAACTTATTTTACCCAAAGTTAA-GAAAAATAGTATTTTAACACATAAATGCAAATTAAAAAAAAACACAATTACTGTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758661 73 + 5974691 -TTGAAATTA--TTATCCAAAGACAAGAGAAAATACCATTTTATCATGTAAATAAAAA--ATGGAG----ACAGTTGTTAGT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=960394.000000 s hg38.chr9_KI270719v1_random 44596 117 + 176845 TAAC-GTTCTCTAAGCAATGTAAAGATTGCTTTTAAGCCATCTAAC-AGAGTTGTATTTATTATTAGGGATCAAAA---AGTGTGTAAATTAGC---ACAAT---ATATTTTATAT-AAAATGAATCTG------ s panTro5.chr4 135069480 117 + 194502333 TAAC-TTTCTCTAAGCAATGTAAAGATTGCTTTTAAGCCATCTAAC-AGAGTTGCATTTATTATTAGGGATCAAAA---AGTGTGTAAATTAGC---ACAAT---ATATTTTACAT-AAAATGAATCTG------ i panTro5.chr4 C 0 I 6 s gorGor5.CYUI01001450v1 49879 117 - 70559 TAAC-GTTCTCTAAGCAATGTAAAGATTGCTTTTAAGCCATCTAAC-AGAGTTGTATTTATTATTAGGGATCAAAA---AGTGTGTAAATTAGC---ACAAT---ATATTTTATAT-AAAATGAATCTG------ i gorGor5.CYUI01001450v1 C 0 I 6 s nomLeu3.chr7b 90463507 118 - 115148730 TAACTTTTCTCTAAGCAATGTAGAGATTGCTTTTAAGCCATCTAAC-AGAGTTCTATTTATTATTAGGGATCAAAA---AGTGTGTAAATTAGC---ACCAT---ATATTTTATAT-AGAATGAATCTG------ i nomLeu3.chr7b C 0 I 6 s rheMac8.chr5 131405645 118 + 190429646 GAAC-TTTCTCTAAGCAATGTAAAGATTGTTTTTAAGCCATCTAAC-AGAGTTGTATTTATTATTAGGGATCAAAA--AAGTGTGTAAATTAGC---ACAAC---ATATTTTATAC-AAAATTAATCTG------ i rheMac8.chr5 C 0 I 6 s macFas5.chr5 130924652 118 + 189454096 GAAC-TTTCTCTAAGCAATGTAAAGATTGTTTTTAAGCCATCTAAC-AGAGTTGTATTTATTATTAGGGATCAAAA--AAGTGTGTAAATTAGC---ACAAC---ATATTTTATAC-AAAATTAATCTG------ i macFas5.chr5 C 0 I 6 s macNem1.NW_012010911v1 34915982 118 - 40319822 GAAC-TTTCTCTAAGCAATGTAAAGATTGTTTTTAAGCCATCTAAC-AGAGTTGTCTTTATTATTAGGGATCAAAA--TAGTGTGTAAATTAGC---ACAAC---ATATTTTATAC-AAAATTAATCTG------ i macNem1.NW_012010911v1 C 0 I 6 s cerAty1.NW_012000798v1 4470048 118 - 9219162 GAAC-TTTCTCTAAGCAATGTAAAGATTGTTTTTAAGCCATCTAAC-AGAGTTGTAGTTATTATTAGGGATCAAAA--AAGTGTGTAAATTAGC---ACAAC---ATATTTTATAC-AAAATTAATCTG------ i cerAty1.NW_012000798v1 C 0 I 6 s chlSab2.chr7 78995114 118 + 135778131 GAAC-TTTCTCTAAGCAATGTAAAGATTGTTTTTAAGCCATCTAAC-AGAGTTGTATTTATTATTAGGGATCAAAA--AAGTGTGTAAATTAGC---ACAAC---ATATTTTATAC-AAAATTAATCTG------ i chlSab2.chr7 C 0 I 136 s manLeu1.NW_012103277v1 2764996 118 - 3013352 GAAC-TTTCTCTAAGCAATGTAAAGATTGTTTTTAAGCCATGGAAC-AGAGTTGTATTTATTATTAGGGATCAAAA--AAGTGTGTAAATTAGC---ACAAC---ATATTTTATAC-AAAATTAATCTG------ i manLeu1.NW_012103277v1 C 0 I 6 s colAng1.NW_012114544v1 5993387 118 + 8656713 GAAC-TTCCTCTAAGCAATGTAAAGATTGTTTTTAAGCCATCTAAC-AGAGTTGTATTTATTATTAGGGATCAAAA--AAGTGTGTAAATTAGC---ACAAC---ATATTTTATAC-AAAATTAATCTG------ i colAng1.NW_012114544v1 C 0 I 6 s calJac3.chr3 129421799 123 - 190850796 GAAC-TCTCTGTAAGCAGTGTACAGACTGTTTTTAAACAACTTAAC-AGAGTTGTATTTATTATTAGAAATCAAGTGTAACTGTGTAAATTATCACAACAAT---GTATTTTACAT-AAAATTAATCTG------ i calJac3.chr3 C 0 I 6 s saiBol1.JH378129 6507346 120 - 25294431 GAAC-TCTCTGTAAGCAATGTACAGACTGTTTTTAAAACATTTAAC-AGAGTTGTATTTATTATTAGAAATCAAATGTAACTGTGTAAATTATC---ACACT---ATATTTTCTGT-AGAATTAATCTG------ i saiBol1.JH378129 C 0 I 6 s cebCap1.NW_016107420v1 4062133 120 - 6311556 GAAC-TCTCTGTATGTAATGTACAGGCTGTTTTTAAAACATTTAAC-AGAGTTGTATTTATTATTAGAAATCAAATGTAACTGTGTAAATTATC---ACAAT---ATATTTTATAT-AAAATTAATCTG------ i cebCap1.NW_016107420v1 C 0 I 6 s aotNan1.NW_018507635v1 14917736 120 + 15034901 GAAC-TCTCTGTAAGCAATGTACAGACTGTTTTTAAACCATTTAAT-ATAGTTGTATTTATTATTAGAAATCAAATGTAACTGTGTAAATTATC---ACAAG---ATATTTTATGT-AAAATTAATCTG------ i aotNan1.NW_018507635v1 C 0 I 4 s canFam3.chr19 44043948 112 - 53741614 ----GGTTCTTCA----------AGATAGTTTTTATAGCAGCTATCAAAAGTTTTATTTATTTCTGAAAGTCAAATTTAAAGGTTTAAATGAAC---ATAAGTAAATATTTTATGCAAAAATCAATTTT------ i canFam3.chr19 C 0 I 6 s dasNov3.JH569232 1758734 121 + 5974691 ----TTTACTCTAAGCACTGTAAAGA--GTTACTAAAATACCAATCAAAAGTTTTATTTATTATCAAAAGTGAAGTTTAAATGTATGAATTAGC---ATAAT----TAAGTATTAA-TATATTAACCTGATAGTG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321485 288 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=60057.000000 s hg38.chr9_KI270719v1_random 44713 11 + 176845 TTTTCTCTTAT s panTro5.chr4 135069603 11 + 194502333 TTTTCTCTTAT i panTro5.chr4 I 6 C 0 s gorGor5.CYUI01001450v1 50002 11 - 70559 TTTTCTCTTAT i gorGor5.CYUI01001450v1 I 6 C 0 s nomLeu3.chr7b 90463631 11 - 115148730 TTTTCTCTTAT i nomLeu3.chr7b I 6 C 0 s rheMac8.chr5 131405769 8 + 190429646 TTTTCTTT--- i rheMac8.chr5 I 6 C 0 s macFas5.chr5 130924776 8 + 189454096 TTTTCTTT--- i macFas5.chr5 I 6 C 0 s macNem1.NW_012010911v1 34916106 8 - 40319822 TTTTCTTT--- i macNem1.NW_012010911v1 I 6 C 0 s cerAty1.NW_012000798v1 4470172 8 - 9219162 TTTTCTTT--- i cerAty1.NW_012000798v1 I 6 C 0 s manLeu1.NW_012103277v1 2765120 8 - 3013352 TTTTCTTT--- i manLeu1.NW_012103277v1 I 6 C 0 s colAng1.NW_012114544v1 5993511 8 + 8656713 TTTTCTTT--- i colAng1.NW_012114544v1 I 6 C 0 s calJac3.chr3 129421928 11 - 190850796 TTTTCTCTTAT i calJac3.chr3 I 6 C 0 s saiBol1.JH378129 6507472 11 - 25294431 TTTTCTCTTAT i saiBol1.JH378129 I 6 C 0 s cebCap1.NW_016107420v1 4062259 11 - 6311556 TTTTCTCTTAT i cebCap1.NW_016107420v1 I 6 C 0 s aotNan1.NW_018507635v1 14917860 11 + 15034901 TTTTCTCTTAT i aotNan1.NW_018507635v1 I 4 C 0 s canFam3.chr19 44044066 11 - 53741614 TTTCCTGTTAT i canFam3.chr19 I 6 C 0 s dasNov3.JH569232 1758855 11 + 5974691 TTTTCTCTTAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321485 288 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M e chlSab2.chr7 78995232 136 + 135778131 I a score=621410.000000 s hg38.chr9_KI270719v1_random 44724 73 + 176845 AAGAGTATACAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC---------AAATAAAAACAA--CTGCTATATCTGAATT s panTro5.chr4 135069614 73 + 194502333 AAGAGTATACAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC---------AAATAAAAACAA--CTGCTATATCTGAATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 50013 73 - 70559 AAGAGTATACAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC---------AAATAAAAACAA--CTGCTATATCTGAATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463642 68 - 115148730 AAGAGTATGCAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC--------------AAAACAA--CTGCTGTATCTGAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405777 73 + 190429646 AAGAGTATAAAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC---------AAATAAAAACAA--CTGCTATGTCTGAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924784 73 + 189454096 AAGAGTATAAAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC---------AAATAAAAACAA--CTGCTATGTCTGAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34916114 73 - 40319822 AAGAGTATAAAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC---------AAATAAAAACAA--CTGCTATGTCTGAatt i macNem1.NW_012010911v1 C 0 I 356 s cerAty1.NW_012000798v1 4470180 73 - 9219162 AAGAGTATAAAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC---------AAATAAAAACAA--CTGCTATGTCTGAATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78995368 73 + 135778131 aaGAGTATAAAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC---------AAATAAAAACAA--CTGCTATGTCTGAATT i chlSab2.chr7 I 136 C 0 s manLeu1.NW_012103277v1 2765128 73 - 3013352 AAGAGTATAAAATTATAATTC-TGAATTTTGAATTTATTCTTAAAC---------AAATAAAAACAA--CTGCTATGTCTGAATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993519 69 + 8656713 AAGAGTATAtaattataattc-tgaattttaaatttattctt-------------aaATAAAAACAA--CTGCTATGTCTGAATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129421939 70 - 190850796 AAGAGTGTATA---ATAATTC-CAAATTTTGTATTTATTTCTAAAC---------AAATAAAAACAA--CTGCTATGTCAGAATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507483 66 - 25294431 AGGAGTGTATA---ATAATTC-CATAGTTTGTATTTATTTCTAAAC-------------AAAAACAA--CCGCTATGTCTGAATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062270 68 - 6311556 --GAGTGTATA---ATAATTC-CAAATTTTGTATTTATTTCTAAGC---------AAATAAAAACAA--CTTCTATGTCTGAATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917871 66 + 15034901 AAGAGTGTATA---ATAATTC-CAAATTTTGTATTTATTTCTAAAC-------------AAAAACAA--CTGCTGTGTCTGAATT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44044077 75 - 53741614 AAATTTCTATAAGTATAATTC-AGAATTTTAAATTTATTTCTAAAC---------AAATAAGAAAAATTCTGTCAGGCCTGAATT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758866 83 + 5974691 AACTTTATATAATTATAATTCATGATTTTTAAATTCATTCCTATATCTATGAGGGAAAAAAAAAGTC--CTACTAGGTCAAAATT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321485 288 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=90913.000000 s hg38.chr9_KI270719v1_random 44797 16 + 176845 CTTG-TTTTATGTCAC--t s panTro5.chr4 135069687 16 + 194502333 CTTG-TTTTATGTCAC--T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 50086 16 - 70559 CTTG-TTTTATGTCAC--T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463710 16 - 115148730 CTTG-TTTTATGTCAC--T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405850 16 + 190429646 ATTG-TTCTATATCAC--T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924857 16 + 189454096 ATTG-TTCTATATCAC--T i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4470253 16 - 9219162 ATTG-TTCTATATCAC--T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78995441 16 + 135778131 ATTG-TTCTATATCAC--T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2765201 16 - 3013352 ATTG-TTCTATATCAC--T i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993588 16 + 8656713 ATTG-TTCTATATCAC--T i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129422009 15 - 190850796 CTTG-TTTTATGTCAC--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507549 15 - 25294431 CTTG-TTTTATGTCAC--- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062338 16 - 6311556 CTTG-TTTTATGTCACT-- i cebCap1.NW_016107420v1 C 0 I 11 s aotNan1.NW_018507635v1 14917937 16 + 15034901 CTTG-TTTTATGTCAC-T- i aotNan1.NW_018507635v1 C 0 I 11 s canFam3.chr19 44044152 17 - 53741614 CTTGCCTTTCTATCAC--T i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758949 17 + 5974691 CTTGTTTTTATGATAC--T i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321485 288 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M e macNem1.NW_012010911v1 34916187 356 - 40319822 I a score=6875.000000 s hg38.chr9_KI270719v1_random 44813 2 + 176845 ct s panTro5.chr4 135069703 2 + 194502333 CT i panTro5.chr4 C 0 I 12 s gorGor5.CYUI01001450v1 50102 2 - 70559 CT i gorGor5.CYUI01001450v1 C 0 I 12 s nomLeu3.chr7b 90463726 2 - 115148730 CT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405866 2 + 190429646 CT i rheMac8.chr5 C 0 I 9 s macFas5.chr5 130924873 2 + 189454096 CT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4470269 2 - 9219162 CT i cerAty1.NW_012000798v1 C 0 I 9 s chlSab2.chr7 78995457 2 + 135778131 CT i chlSab2.chr7 C 0 I 9 s manLeu1.NW_012103277v1 2765217 2 - 3013352 CT i manLeu1.NW_012103277v1 C 0 I 9 s colAng1.NW_012114544v1 5993604 2 + 8656713 CT i colAng1.NW_012114544v1 C 0 I 9 s canFam3.chr19 44044169 2 - 53741614 CT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758966 1 + 5974691 C- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321485 288 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M e aotNan1.NW_018507635v1 14917953 11 + 15034901 I e cebCap1.NW_016107420v1 4062354 11 - 6311556 I e saiBol1.JH378129 6507564 0 - 25294431 C e calJac3.chr3 129422024 0 - 190850796 C e macNem1.NW_012010911v1 34916187 356 - 40319822 I a score=-13422.000000 s hg38.chr9_KI270719v1_random 44815 48 + 176845 atctatctatatttttttactatctat-----atttttt-----ttactatctatata s nomLeu3.chr7b 90463728 12 - 115148730 ---TGTGCATATTTT------------------------------------------- i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 129422024 12 - 190850796 TATTGTGCATAT---------------------------------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507564 12 - 25294431 TATTACGCATAT---------------------------------------------- i saiBol1.JH378129 C 0 C 0 s canFam3.chr19 44044171 8 - 53741614 ---CCTGCATA----------------------------------------------- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1758967 56 + 5974691 --ACATGTACATTTTCTCATTATTTTTCTGGCATTTTATAAAAGTTATTACTTACATA i dasNov3.JH569232 C 0 I 409 e micMur3.chr14 26321485 288 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M e aotNan1.NW_018507635v1 14917953 11 + 15034901 I e cebCap1.NW_016107420v1 4062354 11 - 6311556 I e colAng1.NW_012114544v1 5993606 9 + 8656713 I e manLeu1.NW_012103277v1 2765219 9 - 3013352 I e chlSab2.chr7 78995459 9 + 135778131 I e cerAty1.NW_012000798v1 4470271 9 - 9219162 I e macNem1.NW_012010911v1 34916187 356 - 40319822 I e macFas5.chr5 130924875 0 + 189454096 C e rheMac8.chr5 131405868 9 + 190429646 I e gorGor5.CYUI01001450v1 50104 12 - 70559 I e panTro5.chr4 135069705 12 + 194502333 I a score=72265.000000 s hg38.chr9_KI270719v1_random 44863 24 + 176845 tttttactatctatattttaggca s rheMac8.chr5 131405877 24 + 190429646 TTTTTACCATCTATATTTTAGGCA i rheMac8.chr5 I 9 C 0 s macFas5.chr5 130924875 12 + 189454096 -------TGTGCATATTTT----- i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4470280 24 - 9219162 TTTTTACCATCTATATTTTAGGCA i cerAty1.NW_012000798v1 I 9 C 0 s manLeu1.NW_012103277v1 2765228 24 - 3013352 TTTTTACCATCTATATTTTAGGCA i manLeu1.NW_012103277v1 I 9 C 0 s colAng1.NW_012114544v1 5993615 24 + 8656713 TTTTTACCATCTATATTTTAGGCA i colAng1.NW_012114544v1 I 9 C 0 s calJac3.chr3 129422036 24 - 190850796 CTTTTACTCTTTATGTTTTAGGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507576 24 - 25294431 TTTTTACTCTTTATGTTTTAGGCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062365 24 - 6311556 TTTTTACTCTTTATGTTTTAGGCA i cebCap1.NW_016107420v1 I 11 C 0 s aotNan1.NW_018507635v1 14917964 24 + 15034901 TTTTTACTCTTTATGTTTTAGGCA i aotNan1.NW_018507635v1 I 11 C 0 s canFam3.chr19 44044179 23 - 53741614 TTTTCTCTCTTTACATTTCAGGC- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26321485 288 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1759023 409 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M e chlSab2.chr7 78995459 9 + 135778131 I e macNem1.NW_012010911v1 34916187 356 - 40319822 I e nomLeu3.chr7b 90463740 0 - 115148730 C e gorGor5.CYUI01001450v1 50104 12 - 70559 I e panTro5.chr4 135069705 12 + 194502333 I a score=3735.000000 s hg38.chr9_KI270719v1_random 44887 3 + 176845 ttt s macNem1.NW_012010911v1 34916543 3 - 40319822 TTT i macNem1.NW_012010911v1 I 356 C 0 s chlSab2.chr7 78995468 3 + 135778131 TTT i chlSab2.chr7 I 9 C 0 s calJac3.chr3 129422060 2 - 190850796 -TT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507600 2 - 25294431 -TT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062389 2 - 6311556 -TT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917988 2 + 15034901 -TT i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26321485 288 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1759023 409 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44044202 0 - 53741614 C e otoGar3.GL873702 941924 565 - 3201129 M e colAng1.NW_012114544v1 5993639 0 + 8656713 C e manLeu1.NW_012103277v1 2765252 0 - 3013352 C e cerAty1.NW_012000798v1 4470304 0 - 9219162 C e macFas5.chr5 130924887 0 + 189454096 C e rheMac8.chr5 131405901 0 + 190429646 C e nomLeu3.chr7b 90463740 0 - 115148730 C e gorGor5.CYUI01001450v1 50104 12 - 70559 I e panTro5.chr4 135069705 12 + 194502333 I a score=145173.000000 s hg38.chr9_KI270719v1_random 44890 43 + 176845 ttactatctatATTTTAGGCATTTTAT--AGGTTAAGTATGCGCA s panTro5.chr4 135069717 43 + 194502333 TTACTATCTATATTTTAGGCATTTTAT--AAGTTAAGTATGTGCA i panTro5.chr4 I 12 C 0 s gorGor5.CYUI01001450v1 50116 43 - 70559 TTACTATCTATATTTTAGGCATTTTAT--AGGTTAAGTATGAGCA i gorGor5.CYUI01001450v1 I 12 C 0 s nomLeu3.chr7b 90463740 43 - 115148730 TTACTATCTATATTTTAGGCATTTTAT--AGGTTAAGTATGCACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405901 24 + 190429646 ---------------------TTTTATACAGGTTAAGTACGTGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924887 45 + 189454096 TTACCATCTATATTTTAGGCATTTTATACAGGTTAAGTACGTGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34916546 45 - 40319822 TTACCATCTATATTTTAGGCATTTTATACAGGTTAAGTACGTGCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4470304 24 - 9219162 ---------------------TTTTATACAGGTTAAGTACGTGCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78995471 45 + 135778131 TTACCATCTATATTTCAGGCATTTTATACAGGTTAAGTACCTGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2765252 24 - 3013352 ---------------------TTTTATACAGGGTAAGCACATGCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993639 24 + 8656713 ---------------------TTTTGTATAGGTTAAGTACGTGCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129422062 22 - 190850796 -----------------------TTGTATAGGTTAAATATGTGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507602 22 - 25294431 -----------------------TTGTATAGGTTAAATATGTGCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062391 22 - 6311556 -----------------------TTGTATTGGTTAAATATGTGCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14917990 22 + 15034901 -----------------------TTGTATAGGTTAAATATGTGCT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44044202 16 - 53741614 -----------------------------AGGTAAAGTATTTACA i canFam3.chr19 C 0 C 0 e micMur3.chr14 26321485 288 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1759023 409 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=121784.000000 s hg38.chr9_KI270719v1_random 44933 10 + 176845 GTTGGTGCTT s panTro5.chr4 135069760 10 + 194502333 GTTGGTGCTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 50159 10 - 70559 GTTGGTGCTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463783 10 - 115148730 GTTGGTGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405925 10 + 190429646 GTTGGTGCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924932 10 + 189454096 GTTGGTGCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34916591 10 - 40319822 GTTGGTGCTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4470328 10 - 9219162 GTTGGTGCTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78995516 10 + 135778131 ATTGGTGCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2765276 10 - 3013352 GTTGGTGCTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993663 10 + 8656713 GCTGGTGCTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129422084 10 - 190850796 GTTGGTGCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507624 10 - 25294431 GTTGGTGCTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062413 10 - 6311556 GTTGGTGCTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918012 10 + 15034901 GTTGGTGCTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26321773 10 - 93316391 GTTGGTGCTT i micMur3.chr14 I 288 C 0 s canFam3.chr19 44044218 10 - 53741614 GTTGATGCTC i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e ponAbe2.chrUn 4404220 1782 + 72422247 I e dasNov3.JH569232 1759023 409 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=41496.000000 s hg38.chr9_KI270719v1_random 44943 4 + 176845 ACTA s panTro5.chr4 135069770 4 + 194502333 ACTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 50169 4 - 70559 ACTA i gorGor5.CYUI01001450v1 C 0 C 0 s ponAbe2.chrUn 4406002 4 + 72422247 ACTA i ponAbe2.chrUn I 1782 N 0 s nomLeu3.chr7b 90463793 4 - 115148730 ACTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405935 4 + 190429646 ACTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924942 4 + 189454096 ACTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34916601 4 - 40319822 ACTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4470338 4 - 9219162 ACTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78995526 4 + 135778131 ACTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2765286 4 - 3013352 ACTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993673 4 + 8656713 ACTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129422094 4 - 190850796 ACTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507634 4 - 25294431 AGTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062423 4 - 6311556 AGTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918022 4 + 15034901 AGGA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26321783 4 - 93316391 ACTA i micMur3.chr14 C 0 C 0 s canFam3.chr19 44044228 4 - 53741614 ACCA i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1759023 409 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=172628.000000 s hg38.chr9_KI270719v1_random 44947 20 + 176845 AATATAGCCTAGCAATGCTC s panTro5.chr4 135069774 20 + 194502333 AATATAGCCTAGAAATGCTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 50173 20 - 70559 AATATAGCCTAGCAATGCTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463797 20 - 115148730 AATATAGCCTAGCAATGCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405939 20 + 190429646 AATATAGCCTAGAAATATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924946 20 + 189454096 AATATAGCCTAGAAATATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34916605 20 - 40319822 AATATAGCCTAGAAATATTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4470342 20 - 9219162 AATATAGCCTAGATATATTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78995530 20 + 135778131 AATATAGCCTAGAAATATTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2765290 20 - 3013352 AATATAGCCTAGATATATTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993677 20 + 8656713 AATATAGCCTAGAAATGTTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129422098 20 - 190850796 AATGTATCCTAGCAAGGCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507638 20 - 25294431 AATGTAGCCTAGCAAGGCTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062427 20 - 6311556 AATGTAGCCTAGCAAGGCTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918026 20 + 15034901 AATGTAGCCTAGCAAGGGTC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26321787 20 - 93316391 CATACAGGCTAGCAATGCTC i micMur3.chr14 C 0 I 4545 s canFam3.chr19 44044232 20 - 53741614 CATAGAGCCCAGCTATGGTC i canFam3.chr19 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1759023 409 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=5899704.000000 s hg38.chr9_KI270719v1_random 44967 717 + 176845 CCTGTttcttttt-ttt----------aacctttaatttcaggggtacatgtgcaggtttgttatataaatacatttgcatcat--gggggtttgttttacagattaattcattacccaggcattaagcctatgactcattagttatttttccagatggtctccctcccccgaccttctgccctcttgtagggcccagtgtctgttgttcccttctttgtgtgcatgtgttctcatcatttagcttgcacttacaagtgagagaatgtggcatttgttttttc-gttcctacattgatttgctaaggataatggccttcaattccatccatattccttcaaaacacatgatctcgttcctttttatggctacatcttattccctggtgtatatgttcaacattttatttatccagtctttactattgatggccatttaggtctattccatgtctttgttaatgtgaatagtgctgcagtgaacatatgtgtgcgtgtgtctttataatagaacaatttatattcctttggatatatacccagtaatgggattgctgggtctaatggtagttctgtttttaggtctttgaggaataaccacactgttttccacaatggctgaattaatttacattctctttaacagtgtatagtgttcctttttctctgcaaccttaccagcacctgctattttttgactttttaataatagccattctgactggtg----tgCTT s panTro5.chr4 135069794 716 + 194502333 CCTATttcttttt-ttt----------aacctttaatttcaggggtacatgtgcaggtttgttatataaataaatttgcatcat--gggggtttgttttacagattaattcattacccagacattaagcct-ttattcattagttatttttccagatcatctccctcccccgaccttctgccctcttgtaggccccagtgtctgttgttcccttctttgtgtgcatgtgttctcatcatttagattccacttacaagtgagagcatgtggcatttgttttttc-attcctacattcatttgctacggataatggccttcaattccatccatattccttcaaaacacatgatctcgttcctttttatggctacatcttattcccgggtgtatatgttcaacattttatttatccagtctttactattgatggccatttaggtctattccatgtctttgttaatgtgaatagtgctgcagtgaacatatgtgtgcgtgtgtctttataatagaacaatttatattcctttgggtatatacccagtaatgggattgctgggtctaatggtagttctgtttttaggtctttgaggaatcaccacactgttttccacaatggctgaattaatttacattctctttaacagtgtatagtgttcctttttctctgcaaccttgccagcacttgctattttttgacttcttaataatagccattctgactggtg----tgCTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 50193 715 - 70559 CCTGTttcttttt-ttt----------aacctttaatttcaggggtacatgtgcaggtttgttatataaatacatttgcatcat--gggggtttgttttacagattaattcattacccaggcattaagcctatgattcattagttatttttccagatcatctccctcccccgaccttctgccctcttgtaggccccagtgtctgttgttcccttctttgtgtgcatgtgttctcatcatttagcttgcacttacaagtgagagaatgtggcatttgttttttc-gttcctacattcatttgctaaggataatggccttcaattccatccatattccttcaaaacacatgatctc-ttcctttttatggctacatcttattccctggtgtatatgttcaacattttatttatccagtctttacta-tgatggccatttaggtctattccatgtctttgttaatgtgaatagtgctgcagtgaacatatgtgtgcgtgtgtctttataatagaacaatgtatattcctttggatatatacccagtaatgggattgctgggtctaatggtagttctgtttttaggtctttgaggaatcaccacactgttttccacaatggctgaattaatttacattctctttaacagtgtatagtgttcctttttctctgcaaccttaccagcacctgctattttttgactttttaataatagccattctgactggtg----tgCTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90463817 717 - 115148730 CCTGTttcttttt-ttt----------aacctttaatttcaggggtacatgtgcaggtttgttatataaataaatttgcatcat--gggggtttgttttacagattacttcattacccaggcattaagtatatcattcattagttatttttccagatcacctccctcccccgaccttctgccctctcgtaggcctcagtgtctcttgttcccttctttgtgtgcatgtgttctcatcatttagcttccacttataagtgagagcatgtggcatttgttttttc-attcctacattcatttgctaaggatagtggccttcaattccatccatattccttcaaaacacatgatctcattcttttatatggctacatcttattccctagtgtatatgttcaacattttatttatccagtcattactattgatggccatttaggtctactccatgtctttgttaatgtgaatagtgctgcagtgaacatatgtgtgcatgtgtctttataatagaacaatttatattcctttgggtatatacccagtaatgggattgctgggtctaatggtagttctgtttttaggtctttgaggaatcaccacactgttttccacaatggctgaattaatttacattctcattaacagtatatagtgttcctttttctctgcaaccttgccagcacctgctattttttgactttttaataatagccattttgattggtg----tgCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131405959 718 + 190429646 ACTGGTTCtttttgttt----------aacctttaatttcaggagtacatgtgcaggtttgttatataaataaatttaagtcat--gggggtttgttttacagattacttcattacccaggcattaagcttagtactcattagttatttttccagatcatctacctctccccaccttctaccctcttgtaggccccaat-tctattgttcccttctttgtgtgcatgtgttctcatcatttagctttcacttgtaagttagagcatgtggcatttgttttttctgtttctgcattcatttgcaaagaataatggccttcaattccatccacattccttcaaaacacatgatcttgttcttttttatggctgcatcgtattccctggcatacatgttacacattttatttatccagtctttactattgacgaccatttaggtctattccatgtctttgttattgtgaatagtgctgcagtgaacatatgtgtgcacgtgtctttataacagaacaatttatattcctttaggtatatactcagtaatgggattgctgggtctaatggtagttcggtttttaggtctttgaggaatcaccacactgttttccacaatggctgaattaacttacattctcattaacagtgtatagtgtttctttttctctgcaaccttgccggcacctgttattttttgactttttaataatagctgttctgactgctg----tgCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130924966 718 + 189454096 ACTGGTTCtttttgttt----------aacctttaatttcaggagtacatgtgcaggtttgttatataaataaatttaagtcat--gggggtttgttttacagattacttcattacccaggcattaagcttagtactcattagttatttttccagatcatctacctctccccaccttctaccctcttgtaggccccaat-tctattgttcccttctttgtgtgcatgtgttctcatcatttagctttcacttgtaagttagagcatgtggcatttgttttttctgtttctgcattcatttgcaaagaataatggccttcaattccatccacattccttcaaaacacatgatcttgttcttttttatggctgcatcgtattccctggcatacatgttacacattttatttatccagtctttactattgacgaccatttaggtctattccatgtctttgttattgtgaatagtgctgcagtgaacatatgtgtgcacgtgtctttataacagaacaatttatattcctttaggtatatactcagtaatgggattgctgggtctaatggtagttcggtttttaggtctttgaggaatcaccacactgttttccacaatggctgaattaacttacattctcattaacagtgtatagtgtttctttttctctgcaaccttgccggcacctgttattttttgactttttaataatagctgttctgactgctg----tgCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34916625 718 - 40319822 ACTGGTTCtttttgttt----------aacctttaatttcaggagtacatgtgcaggtttgttatataaataaatttaagtcat--gggggtttgttttacagattacttcattacccaggcattaagcttagtactcattagttatttttccagatcatctacctctccccaccttctaccctcttgtaggccccaat-tccattgttcccttctttgtgtgcatgtgttctcatcatttagctttcacttgtaagttagagcatgtggcatttgttttttctgtttctgcattcatttgcaaagaataatggccttcaattccatccacattccttcaaaacacaggatcttgttcttttttatggctgcatcgtattccctggcatacatgttacacattttatttatccagtctttactattgacgaccatttaggtctattccatgtctttgttattgtgaatagtgctgcagtgaacatatgtgtgcacgtgtctttataacagaacaatttatattcctttaggtatatactcagtaatgggattgctgggtctaatggtagttcggtttttaggtctttgaggaatcaccacactgttttccacaatggctaaattaacttacattctcattaacagtgtatagtgtttctttttctctgcaaccttaccagcacctgttattttttgactttttaataatagctgttctgactgctg----tgCTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4470362 718 - 9219162 ACTGGTTCtttttgttt----------aacctttaatttcaggggtacatgtgcaggtttgttatataaataaatttaagtcat--gggggtttgttttacagattacttcattacccaggcattaagcctagtactcattagttatttttccagatcatctacctcttcccaccttctaccctcttgtaggccccaat-tctattattcccttctttgtgtgcatgtgttctcatcatttagctttcacttgtaagtaagaggatgtggcatttgttttttctgtttctgcattcatttgcaaagaataatggccttcaattccatccacattccttcaaaacacatgatcttgttcttttttatggctgcatcgtattccctggcatacatgttacacattttatttatccagtctttactattgacgaccatttaggtctattccatgtctttgttattgtgaatagtgctgcagtgaacatatgtgtgcatgtgtctttataacagaacaatttatattcctttaggtatatactcagtaatgggattgctgggtctaatggtagttcggtttttaggtctttgaggaatcaccacactgttttccacaatggctgaattaacttacattctcattaacagtgtatagtgtttctttttctctgcaaccttgccagcacctgttattttttgactttttaataatagccgttctgactgctg----tgCTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78995550 718 + 135778131 ACTGGTTCtttttgttt----------aacctttaatttcaggggtacatgtgcaggtttgttatataaataaatttaagtcat--gggggtttgttttacagattacttcattacccaggcattaagcctagtactcattagttatttttccagatcatctacctctccccaccttctaccctcttgtaggccccaat-tctattgttcccttctttgtgtgcatgtgttctcatcatttagctttcacttgtaagttagagcatgtggcatttgttttttctgtttctgcatttatttgcaaagaataatggccttcaattccatccccattccttcaaaacacatgatcttgttcttttttatggctgcatcgtattccctggcatacatgttacacattttatttatccagtctttactattgatgatcatttaggtctattccatgtctttgttattgtgaatagtgctgcagtgaacatatgtgtgcatgtgtctttataacagaacaatttatattcctttaggtatatactcagtaatgggattgctgggtctaatggtagttcggtttttaggtctttgaggaatcaccacactgttttccacaatggctgaattaacttgcattctcattaacagtgtatagtgtttctttttctctgcaaccttgccagcacctgttattttttgactttttaataatagccattctgactgctg----tgCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2765310 718 - 3013352 ACTGGTTCtttttgttt----------aacctttaatttcaggggcacatgtgcaggtttgttatataaataaatttaagtcat--ggaggtttgttttacagattacttcattacccaggcattaagcctagtactcattagttatttttccagatcatctacctctccccaccttctactctcttgtaggccccaat-tctattattcccttctttgtgtgcatgtgttctcatcatttagctttcacttgtaagttagagcatgtggcatttgttttttctgtttctgcattcatttgcaaagaataatggccttcaattccatccacattccttcaaaacacatgatcttgttcttttttatggctgcatcgtattccctggcatacatgttacacattttatttatccagtctttactattgacgaccatttaggtctattccatgtctttgttattgtgaatagtgctgcagtgaacatatgtgtgcatgtgtctttataacagaacaatttatattcctttaggtatatactcagtaatgggattgctgggtctaatggtagttcggtttttaggtctttgaggaatcaccacactgttttccacaatggctgaattaacttacattctcattaacagtgtaaagtgtttctttttctctgcaaccttgccaggacctgttattttttgactttttaataatagccgttctgactgctg----tgCTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5993697 718 + 8656713 ACTGGTTCtttttgtct----------aacctttaatttcaggggtacatgtgcaggtttgttatataaataaatttgcgtcat--gggggtttgttttacagattacttcattaaccaggcattaagcctagtactcattagttatttttccagatcatctacctctccccacctaatacactcttgtaggctccaatgtctattgttcccttctttgtgcgcatgtgttctcatcatttagctttcacttataagttagagcatgtggcatttgttttttctgtccctgcattcttttgcaaagaataatggcctttaattccatccatattccttcaaaacacatgatcttgttc-tttttatggctgcatcgtattccctggcatacatgttacacattttatttatccagtctttactattgatggccacttaagtctattccatgtctttgttattgtgaatagtgctgcagtgaacatatgtgtgcatgtgtctttataatagaacaatttatattcctttaggtatatactcagtaatgggattgctgggtctaatggtagttcagtttttaggtctttgaggaatcaccacactgttttccacaatggctgaattaacttacattcttattaacagtgtatagtgtttctttttctctgcaaccttgccagcacctgttattttttgacgttttaataatagccattctgactgctg----tgCTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129422118 723 - 190850796 ATTGGCTCTTTTT-TT------AAAAAAAactttaatttcagggatacatgtgcaggtttgttctatagacaaagttggatcatgggggggtttgttttacagattacatcattactccggcattaagcctagtaatcatttgttatttttccaaatcctcttcctcctcccaccttctaccctcttgtaagcctcagtgtctgttgttcccttctttgtgtccctgtgttgtcgtcattcagcttccacttacaagtaagagcatgtggcattcggttttct-gttcttgcattagtttgctaagtataatggccttcagttccatccatgttccttcaaaatacatgatcttgttcctttttatggctgcatagtatttgctggtgtatatgttccacattttatttatccagtctttattattgatggccatttaggtctatcccgtgtctttcctattgtgaatagtgctgcaatgaacataggtgtgtatgtgtctttgtaatagaatgatttatattcctttgggtatatacgcactaatgggattgccgagtcaaatggcagttctgtttttaggtatttgaggaatcacaacactcttttccacaatggttgaattaatttacattctcattaacagcgtatagtgttccttttcttctgtaacctttccagcagctgttattctttgactttttaataatagccattctgactggcg----tgCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6507658 727 - 25294431 CTTTGTTCTTTTT-TTTTAAAAAAAAAAACttttagtttcagggatacatgtgcaggtttgttctacagataaatttgcgtcac--gagggtttgttttacaggttacatcattacccaggcattaagcctagaattcatttgttatttttccaaatcctctacctcctcccaccttccaccctcttgtaagcctcagtgtctgttgttcccttctttgtgtccatgtgttgccatcatttagcttccacttataagtgagagcatgtggcattcagttttct-gttcttgaattagtttgctaagtataatggccttcagttccatctgtgttccttcaaaatacatgatcttgttcttttttatggctgcatagtatttgctggtgtatatgttccccattttatttatccagtctttattattgatggtcatttaggtctatcccatgtctttcctattgtgaatagtgctgcaatgaacatatgtgcgcgtgtgtctttatagtaggacagtttatattcctttgggtatatactcactaatgggattgctgagtcaaatggcagttctgtttttaggtctttgaggaatcacaacactcttttccacaatgtttgaattaatttacattctcattaacagcatatagtgtttcttttcttccgtaaccttgccagcacctgttattttttgactttttaataatagccattctgactggtg----tgCTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4062447 724 - 6311556 CTTGGTTCTTTTT-TTT-----GTAAAAAAAtttaatttcagggatacatgtgcaggtttgttctacagataaatttgcatcat--gggggtttgttttacagattacatcattacccaggcattaagcctagtactcatttgtaattttttcaaatcccctccctcctctcaccttctactctcttataagcctcggtgtctgttgctcccttctttgtgtccatgtgctgtcatcatttagcttccacttataagtcagagcatgtggcattcagtttttt-cttcttgcattagtttgctaggtataatggccttcagttccatctgtgtttcttcaaaatacatgatcttgttcttttttatggctgcatagtatttgctggtgtatttgttgcccattttatttatccagtctttattattgatggccatttaggtctatcccatgtctttcctattgtaaatagtgctgcaatgaacatatgtgtgcatgtgtctttataatagaacaatttattttcctttgggtatatacttactaatgggattgctgagtcaaatggcagttctgtttttaggtctttgaggaatcacaacacttttttccacaatggttaaattaatttacattctcattaacagcgtatagtgttcc--ttctcctgtaaccttgccagcacctgttattttttgactttttaataatagccattctgacttgagtgCTTGCTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918046 724 + 15034901 CTTGGTTCTTTTT-TTTAA---AAAAAAtactttaatttcagggatacatgtgcaggtttgttctatagataaatttgcatcat--gggggtttgttttacagatgacatcattacccgggcattaagcctagtattcatttgctatttttccaaatccactccctcctcccaccttctaccctcttgtaagcctcagtgtctgttgttcccttctttgtgtccatgtgttgtcatcatttagcttccatttataagtgagagcatgtggcattcagttttct-gttctttcattagtttgctaagtatagtggccttcagttccatccatgttccttcaaaatacatgatcttgttcttttttatggctgcatagtatttgctggtgtatatgttccccattttatctatccagtctttattattgatggccatttaggtctatcccatgtctttccttttgtgagtagtgctgcaatgaacatacgtatgcatgtgtctttataatagaatgatttatattcctttgggtatatacccactaatgggattgctgagtcaaatggcagttctgtttttaggtctttgaggaatcacaacactcttttccacaatggttgaattaatttacattctccttaacagcgtatagtgttccttttcttctgtaaccttgccagcacctgttattttttgactttttaataatagccattctgactggtg----tgCTT i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26321807 4545 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1759023 409 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44044252 0 - 53741614 C e otoGar3.GL873702 941924 565 - 3201129 M a score=20955.000000 s hg38.chr9_KI270719v1_random 45684 2 + 176845 AC s panTro5.chr4 135070510 2 + 194502333 AC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 50908 2 - 70559 AC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90464534 2 - 115148730 AC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131406677 2 + 190429646 AC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130925684 2 + 189454096 AC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34917343 2 - 40319822 AC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471080 2 - 9219162 AC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78996268 2 + 135778131 AC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766028 2 - 3013352 AC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5994415 2 + 8656713 AC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129422841 2 - 190850796 AC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6508385 2 - 25294431 AC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4063171 2 - 6311556 AC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918770 2 + 15034901 AC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44044252 2 - 53741614 AT i canFam3.chr19 C 0 C 0 e micMur3.chr14 26321807 4545 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1759023 409 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=1160662.000000 s hg38.chr9_KI270719v1_random 45686 114 + 176845 tggttcttaatctcacccacatcttagaataatgtggaacatt-caaactacccacacctgtttctaaaaactgaagttct---gttttaattggactttagtagagccaagaaatga s panTro5.chr4 135070512 115 + 194502333 tggttcttaatctcacccacatcttagaataatgtggaacatttcaaagtacccacacctccttctaaaaactgaagttct---gttttaattggactttactagagccaagaaatga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 50910 114 - 70559 tggttcttaatctcacccacatcttagaataatgtggaacatttcaaactacccacacctctttctaaaaactgaagttct---gttttaattggactttagtagagcc-agaaatga i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90464536 115 - 115148730 tggttcttaatctcacccacatcttagaataatgtagaacatttcaaactacccacacctctttctaaaaactgaagttct---gttttaattggactttagtagagccaacaaatga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131406679 118 + 190429646 tggttcttaatcttatccacatcttagaataatgtggaacatttcaagctacccacacctctttctaaaaactgaagttctgaagttttaattggactttagtggagccaagaaatga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130925686 118 + 189454096 tggttcttaatcttatccacatcttagaataatgtggaacatttcaagctacccacacctctttctaaaaactgaagttctgaagttttaattggactttagtagagccaagaaatga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34917345 118 - 40319822 tggttcttaatcttatccacatcttagaataatgtggaacatttcaagctacccacacctctttctaaaaactgaagttctgaagttttaattggactttagtagagccaagaaatga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471082 118 - 9219162 tggttcttaatcttacccacatcttaaaataatgtggaacatttcaagctacccacacctctttctaaaaactgaagttctgaagttttaattggactttagtagagccaagaaatga i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78996270 118 + 135778131 tggttcttaatcttacccacatcttagaataatgtggaacatttcaagctacccacacctctttctaaaaacagaagttctgaagttttcattggactttagtagagccaagaaatga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766030 118 - 3013352 tggttcttaatcttacccacatcttagaataatgtggaacatttcaagctacccacacctctttctaaaaactgaagttctgaagttttaattggactttagtagagccaagaaatga i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5994417 118 + 8656713 tggttcttaatcttacccacatcttagaaaactgtggaacatttcaagctacccatacctctttctaaaaactgaagttctgaagttttagttggactttagtagagccaagaaatga i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129422843 115 - 190850796 TGGTTCTTAGTCTCACCCACATCTTAGAATAATATGGAACATTTCAAACTACCCACACCTCTTTCTAAAAACTGAAGTTCT---GTTTTACTTGGACTTTAGTGGAGCTAAGAAATGA i calJac3.chr3 C 0 I 883 s saiBol1.JH378129 6508387 115 - 25294431 tggttcttaatctcacccacatcttagaataatgtggaacatttcaaactacccacacctttttctaaaaactgaagttct---gttttacttggactttagtggagctaagaaatga i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4063173 115 - 6311556 TGGTTCTTAATCTCACTCACATCTTAGAATAATGTGAAACATTTCAAACTACCCACACCTTTTTCTAAAAACTgaagttct---gttttacttggactttagtggagctaagaaatga i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918772 115 + 15034901 tggttcttaatctcacccacatcttagaataatgtggaacatttcaaactacccacatctttttctaaaaactgaagttct---gctttacttggactttagtggagctaagaaatga i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44044254 113 - 53741614 CGTTTCTTAATTTCATGCCTATATTAGAAGAATGTGAAACATTTCAAACTACCCATACATCTTCTTAAAAATTCA--TTCC---ACTTTGATTAGGCTAGAGTGAGAACAAGAAATAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1759432 111 + 5974691 TGGTTCATGACTTCCCCAGCAGATAATA----TGTGGAACTTCTAAGACTACCCACATCTCTCTTTAAAAcctgaagctct---gttttcattggatcacagtggggccaagaaatgg i dasNov3.JH569232 I 409 C 0 e micMur3.chr14 26321807 4545 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=645042.000000 s hg38.chr9_KI270719v1_random 45800 62 + 176845 gtattacttaa------------aatcttgccatgtgattctactaggaagccagagttcagagccaTGGATTA s panTro5.chr4 135070627 62 + 194502333 gtattacttaa------------aatcttgccatgtgattctactaggaagccagggttcagagccaTGGATTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51024 62 - 70559 gtattacttaa------------aatcttgccatgtgattctactaggaagccagggttcagagccaTGGATTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90464651 62 - 115148730 gtgttacttaa------------aatcttgccatgtgattctactaggatgccagggtttagagccaTGGATTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131406797 62 + 190429646 gtattacttaa------------aatcttaccatgtgattctactaggaagccagggttcagagccaTGGATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130925804 62 + 189454096 gtattacttaa------------aatcttaccatgtgattctactaggaagccagggttcagagccaTGGATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34917463 74 - 40319822 gtattacttaaaattcctagtagaatcttaccatgtgattctactaggaagccagggttcagagccaTGGATTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471200 62 - 9219162 gtattacttaa------------aatcttaccatgtgattctactaggaagccagggtttagagccaTGGATTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78996388 62 + 135778131 gtattacttaa------------aatcttaccatgtgattctactaggaagccagggttcagagccaTGGAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766148 62 - 3013352 gtattacttaa------------aatcttaccatgtgattctactaggaagccagggttcagagccaTGGATTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5994535 62 + 8656713 gtattacttaa------------aatcttaccttgtgattctactaggaagccagggttcagagccaTGGATTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129423841 62 - 190850796 GTACTACttaa------------aaaattgtcatgtgattctactaggaagccatggttcagagccaTGGATTA i calJac3.chr3 I 883 C 0 s saiBol1.JH378129 6508502 62 - 25294431 gtactacttaa------------aaacttgtcatgtgattctactaggaagccagggttcagagccaTGGATTA i saiBol1.JH378129 C 0 I 6 s cebCap1.NW_016107420v1 4063288 62 - 6311556 gcactacttaa------------aaacttgtcatgtgattctactaggaagccagggttcagagccacGGATTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918887 62 + 15034901 gcactccttaa------------aaacttgtcatgtgattctactaggaagccagggttcagagccaTGGATTA i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44044367 59 - 53741614 ---ATACTGTA------------AAACTCACCATGTGAACATACAATGAAGTCACAGTTCAGAGCCATGAAATA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1759543 62 + 5974691 gtattatttaa------------aaattcatcatgtgatttttatatgaagtcagggttcagaaccaTGGGTTA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321807 4545 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=75088.000000 s hg38.chr9_KI270719v1_random 45862 23 + 176845 -CATTTTTAATATAAATACATATT--------------- s panTro5.chr4 135070689 23 + 194502333 -CATTTTTAATATAAATACACATT--------------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51086 23 - 70559 -CATTTTTAATATAAATACACATT--------------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90464713 23 - 115148730 -CATTCTTAATATAAATATACATT--------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131406859 23 + 190429646 -CATTTTTAATATAAATACACATT--------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130925866 23 + 189454096 -CATTTTTAATATAAATACACATT--------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34917537 23 - 40319822 -CATTTTTAATATAAATACACATT--------------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471262 23 - 9219162 -CATTTTTAATATAAATACACATT--------------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78996450 23 + 135778131 -CATTTTTAATATAAATACACATT--------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766210 23 - 3013352 -CATTTTTAATATAAATACACATT--------------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5994597 23 + 8656713 -CATTTTTAATATAAATACACATT--------------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129423903 6 - 190850796 ----------GACCAA----------------------- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4063350 6 - 6311556 ----------CACCAA----------------------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918949 6 + 15034901 ----------CACTAA----------------------- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44044426 23 - 53741614 -GATGTCAAAGGTAAGTACACATT--------------- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1759605 39 + 5974691 TAGCTGCTAAGATAAATATACattattattattattatt i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321807 4545 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M e saiBol1.JH378129 6508564 6 - 25294431 I a score=215851.000000 s hg38.chr9_KI270719v1_random 45885 21 + 176845 ATTAGTTGAAGCAGTTTTAAG s panTro5.chr4 135070712 21 + 194502333 ATTAGTTGAAGCGGTTTTAAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51109 21 - 70559 ATTAGTTGAAGCAGTTTTAAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90464736 21 - 115148730 ATTAGTTGAAGCGGTTTTCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131406882 21 + 190429646 ATTAGTTGAAGCAGTTTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130925889 21 + 189454096 ATTAGTTGAAGCAGTTTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34917560 21 - 40319822 ATTAGTTGAAGCAGTTTTGAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471285 21 - 9219162 ATTAGTTGAAGCAGTTTTGAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78996473 21 + 135778131 ATTAGTTGAAGCAGTTTTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766233 21 - 3013352 ATTAGTTGAAGCAGTTTTGAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5994620 21 + 8656713 ATTAGTTGAAGCAGTTTTGAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129423909 21 - 190850796 ATTAGTTGAAGTGGTTTTAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6508570 21 - 25294431 ATTAGTTGAAGTGGTTTTAAG i saiBol1.JH378129 I 6 C 0 s cebCap1.NW_016107420v1 4063356 21 - 6311556 ATTTGTTGAAGTGGTTTTAAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918955 21 + 15034901 ATTAGTTGAAGTGGTTTTAAG i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44044449 21 - 53741614 ATTAGTTGAACCAATTTTAAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1759644 20 + 5974691 attaGTTGAAGTGGTTTAAA- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26321807 4545 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=258555.000000 s hg38.chr9_KI270719v1_random 45906 24 + 176845 TTAGGATAGCTGTAACGTTGATTG s panTro5.chr4 135070733 24 + 194502333 TTAGGATAGCTGTAACGTTGATTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51130 24 - 70559 TTAGGATAGCTGTAACGTTGATTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90464757 24 - 115148730 TTAGGATAGCTGTAATGCTGATTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131406903 24 + 190429646 TTAAGATAGCTGTAAAATTGATTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130925910 24 + 189454096 TTAAGATAGCTGTAAAATTGATTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34917581 24 - 40319822 TTAAGATAGCTGTAAAATTGATTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471306 24 - 9219162 TTAGGATAGCTGTAAAATTGATTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78996494 24 + 135778131 TTAGGATAGCTGTAAAATTGATTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766254 24 - 3013352 TTAGGATAGCTGTAAGATTGATTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5994641 24 + 8656713 TTAGGATAGCTGTAAAATTGATTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129423930 24 - 190850796 TTACAATAGCTGTAATGTTGATTG i calJac3.chr3 C 0 I 313 s saiBol1.JH378129 6508591 24 - 25294431 TTACAATAGCTGTAATGTTGATTG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4063377 24 - 6311556 TTACAATAGCTGTAATGTTGATTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14918976 24 + 15034901 TTACAATAGCTGTAATGTTGATTG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26326352 24 - 93316391 TTAGGATAGCTGTAATATTGATTG i micMur3.chr14 I 4545 C 0 s canFam3.chr19 44044470 23 - 53741614 -TTAGGTATGTGTGATCTTGATTG i canFam3.chr19 C 0 I 3 s dasNov3.JH569232 1759664 24 + 5974691 TTTGCATAGCTGTAATTTTGATTG i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=3591028.000000 s hg38.chr9_KI270719v1_random 45930 330 + 176845 AAAGGGGAATACTTAAAACAGAACCCTGCCTTGGGTCGTCAAG-ACTTAAAAAATTCTTCTGTTTTTATTCGATTAAATATAATCATGCATTCATTTACTTTAGCATTTGTAATTCTAAAACACATTGCAAATTTCACAAAAC-TATCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAGTAG-TATATTCACTTCAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACTT-AAA-ATATAATTAATAGTTACTCAGC-AAAAATAGAAAGATGTTAGCTGACTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA s panTro5.chr4 135070757 326 + 194502333 AAAGGGGAATACTTAAAACAGAACCCTGCCTTGGGTCGTCAAG-ACTTAAAAAATTCTTCTGTTTTTATTCTATTAAATATAATCATGCATTCATTTACTTTAGCATTTATAATTCTAAAATACATTGCAAATTTCACAAAAC-TACCATTTTCTAAATGTCAGCACTCTAAATACAACATTTATTTTTTAAAGTAG-TATATTCACTTTAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACTT-AAA-ATATAATT----GTTACTCAGC-AAAAATAGAAAGATGTTAGCTGACTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51154 330 - 70559 AAAGGGGAATACTTAAAACAGAACCCTGCCTTGGGTCGTCAAG-ACTTAAAAAATTCTTCTGTTTTTATTCTATTAAATATAATCATGCATTCATTTACTTTAGCATTTATAATTCTAAAACACATTGCAAATTTCACAAAAC-TACCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAGTAG-TATATTCACTTCAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACTT-AAA-ATATAATTAATAGTTACTCAGC-AAAAATAGAAAGATGTTAGCTGACTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90464781 313 - 115148730 AAAGGGGAATGCTTAGAACAGAACCCTGCCTTGGGTCGTCAAG-ACTTAAAAAATTCTTC------------------TATAATCGTGCATTCATTTACTTTAGCATTTATAATTCTACAACACATTGCAAATTTCACAAAAC-TAGCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAAGAG-TATATTCACTTCAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACTT-AAA-ATATAATTAATAGTTACTCAGCAAAAAATAGAAAGATGTTAACTGACTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131406927 330 + 190429646 AAAAGGGAATACTTATAACAGAACCCTGCCTTGGGTCGTCAAA-ACTTAAAAAATTACTCTATTTTTATTATATTAAATATAATCATGCATTCATTTACTTTAGCACTTATATTTCTAAAACACATTGCAAATTTCACAAAAC-TAGCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAATAG-TATATTCACTTCAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACTT-AAA-ATATAATTAATAGTTACTCAGC-AAAAATAGAAAGATGTTAACTGACTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130925934 330 + 189454096 AAAAGGGAATACTTATAACAGAACCCTGCCTTGGGTCGTCAAA-ACTTAAAAAATTACTCTATTTTTATTATATTAAATATAATCATGCATTCATTTACTTTAGCACTTATATTTCTAAAACACATTGCAAATTTCACAAAAC-TAGCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAATAG-TATATTCACTTCAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACTT-AAA-ATATAATTAATAGTTACTCAGC-AAAAATAGAAAGATGTTAACTGACTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34917605 330 - 40319822 AAAAGGGAATACTTATAACAGAACCCTGCCTTGGGTCGTCAAA-ACTTAAAAAATTTCTCTATTTTTATTGTATTAAATATAATCATGCATTCATTTACTTTAGCACTTATATTTCTAAAACACATTGCAAATTTCACAAAAC-TAGCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAATAG-TATATTCACTTCAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACTT-ATA-ATATAATTAATAGTTTCTCAGC-AAAAATAGAAAGATGTTAACTGACTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471330 325 - 9219162 AAAAGGGAATACTTATAACAGAACCCTGCCTTGGGTCGTCAAA-ACGTAAAAAATTACTCTATTTTTATTATATTAAATATAATCATGCATTCATTTACTTTAGCATTTATCTTTCTAAAACACATTGCAAATTTCATAAAAC-TAGCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAATAC-TATATTCACTTCAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACT-------TATAATTAATAGTTACTCAGC-AAAAATAGAAAGATGTTAACTGACTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78996518 330 + 135778131 AAAAGGGAATACTTATAACAGAACCCTGCCTTGGGTCGTCAAA-ACTTAAAAAATTACTCTATTTTTATTATATTAAATATAATCATGCATTCATTTACTTTAGCATTTATCTTTCTAAAACACATTGCAAATTTCACAAAAC-TAGCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAATAC-TATATTCACTTCAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACTT-AAA-ATATAATTAATAGTTACTCAGC-AAAAATAGAAAGACGTTAACTGACTGTATCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766278 330 - 3013352 AAAAGGGAATACTTATAACAGAACCCTGCCTTGGGTCGTCAAA-ACGTAAAAAATTACTCTATTTTTATTATATTAAATATAATCATGCATTCATTTACTTTACCATTTATCTTTCTAAAACACATTGCAAATTTCACAAAAC-CAGCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAATAC-TATATTCACTTCAAATTCCATTGCTGTGTCAAGAGTTAGTTGAACTT-AAA-ATATAATTAATAGTTACTCAGC-AAAAATAGAAAGATGGTAACTGACTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5994665 300 + 8656713 AAAAGGGAATACTTATAACAGAACCCTGCCTTGGGTCGTCAAA-ACTTAAAAAATTACTCTGTTTTTATTATATTAAATATAATCATGCATTCATTTACTTTAGCATTTATAATTCTAAAACACATTGCAAATTTCACAAAAC-TAGCATTTTCTAAATGTCAACACTCTAAATACACCATTTATTTTTTAAAATAC-TATATTCACTTCAAATTCCATTGCTGTGTCTAGAGTTAGTTGAACTT-AAA-ATATAA-------------------------------GTTAACTGATTGTGTCAAAAGAAATATTTTAACACTGATTTCA-------------------TTTTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129424267 326 - 190850796 aaaGAGGAATGCTTATAACAGAACCCTGCCTTGGGTCTTCAAG-ACTTAAAATATTTTTCTGTTTTTATTCTATTAAATATAATCTTACATTCATTTAGTTTAGCATTTATAATTCTAAAACACATTGTGAATTTCATAAAAC-TAGCATTTTCTAAATGTTAACACTCTAAATATATCATTTATTTTTTAAAATAG-TGTGTTCACTTCAAATTCCATTGCTGTGTCAAGAGTCA----AACTT-AAA-ATATAATTAATGGTTATTTAGC-AAAAATAGAAAGATTTTAATTGACTGTGTCAAAAGAAGTATTTTAACACTGATTTTA-------------------TTTTCA i calJac3.chr3 I 313 C 0 s saiBol1.JH378129 6508615 324 - 25294431 AAAGAGGAATGCTTCTAACAGAACCCTGCCTTGGGTCTTCAAG-ACTTAAAATACTCTTCTGTTTTTATTCTATTAAATATAATCTTATATTCATTTAGTTTAGCATTTATAATTCTAAAACACATTGTGAATTTCATAAAAC-TAGCATTTTCTAAATGTCAACACTCTAAATATATCATTTATTTTTTAAAATAG-TATGTTCACTTCAAATTCCATTGCTGTGTC--GAGTCA----AGCTT-AAA-CTGTAATTAATAGTTATTTAGC-AAAAATAGAAAGATGTTAACTGACTGTGTCAAAAGAAGTATTTTAACACTGATTTTA-------------------TTTTCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4063401 324 - 6311556 AAAGAGTAATGCTTATAACAGAACCCTGCCTTGGGTCTTCAAG-ACTTAAAATATTCTTCTGTTTTTATTCTATTAAATATAATCTTACATTCATTTAATTTAGCATTTATAATTCTAAAACACATTGTGAATTTCATAAAAC-TAGCATTTTCTAAATTTCAACACTCTAAATATATAATTTATTTTTTAAAACAG-TATGTTCACTTCAAATTCCATTGCTGTGTC--GAGTCA----AATTT-AAA-ATATAATTAATAGTTATTTAGC-AAAAATAGAAAGATGTTAACTGACTGTGTCAAAAGAAGTATTTGAACACTGATTTCA-------------------TTTTCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919000 326 + 15034901 AAAGAGGAATGCTTATAACAGAACCCTGCCTTGGGTCTTCAAG-ACTTAAAATATTCTTCTGTTTTTATTCTATTAAATATAATCTTACATTCATTTAGTTTAGCATTTATAATTCTAAAACAAATTGTGAATTTCATAAAAC-TAGCATTTTCTAAATGTCAACACTCTAAATATATCATTTATTTTTTAAAATAG-TATGTTCATTTCAAATTCCACTGCTGTGTCAAGAGTCA----AACTT-AAA-ATATAATTAATAGTTATTTAGC-AAAAATAGAAAGATGTTAACTGACTGTGTCAAAAGAAGTATTTTAGCACTGATTTTA-------------------TTTTCA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26326376 325 - 93316391 AAAAGGGAGCACTTACAATAAAACCTTTCCTTGGACTTTCAAGTACTTAAAATATTCTTCTGTTTTTATTCCATTAAATATAATCTTTCATTCATTTACTTTAGCATTTATGATTCTAAAACACATTACAAATTTCAAAAAACTTATCATTTTCTTAATGTCAACACCTTAAATATGCCATTTATTTTTTAAAATAG-TATGTTTTCTTAAAATCCCATTGCTGTGTCAAGAGTCAATCGAACTTAAAA-ATATAATTAA----TACTCAGC-AAAAATGGGAAGATTT----TGACTGTGTCAAATGAAATATTTTAACACTGATTTCA-------------------TTTTTA i micMur3.chr14 C 0 C 0 s canFam3.chr19 44044496 347 - 53741614 AAGGAGTATTTATTATAATAGAACTTTGCCTGAAGCTTTAAGT-ATTTAAAATATTATTCTGCTTTTATTTCATTAAATATAATCTGTTATTTATTTATCTTAACATTTATGATTCTGGGACATATTACAAATTTCACAAAAC-CTGCATTTTCTAAATGTCAACACTCTAAATATATCATTTATTTTCCAAA-TAG-TATGTTTTCTTCAAATTCCATTGCTATGTT--GAGTCAATTGAATAT-AAAGATATAATTATTAGTTACCCAGC-AAAAATAGAAAGATTTTAGCTAACTGTGTCTAAATAAATATTTCAAAACTGATTTCAGCTTAACAGAGACTGGAttttttta i canFam3.chr19 I 3 I 125 s dasNov3.JH569232 1759688 333 + 5974691 AATGGGGAGTGCTTATAAGAGAAGTCTGTCTTGTGCCTTCAAGTATTTAAAATATCCTTCTGTTTTCATTCCATTAAAGGTAATTTGCCAGCCATTTACTTTAACATTTATGATTCTTAGACACATTACAGATTTCATAAAAC-TTGCAATTTCTAAATGCTAACATTCTAACTATGCCATTTATTTTTTAAAATAGTTATGTTTGCTTAAAATTCCATTGCTGTGTCAAGTGCCAATTGAACTTAAAA-ATATAATTATTAGTTACTCAGC-AAAAGTATAATGATTTTAACCAACTGTGTCTAAAGAAATACTTTTAAACTGATTTCA-------------------TTTTTG i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=1160273.000000 s hg38.chr9_KI270719v1_random 46260 103 + 176845 CTAAATG----------------------------------------ACTGAATTTTTCTTTATGTTTTATGCTTAAGC---TT---CTCTGCTTTCTTTC--------------------------------TA-TTTT--TTGTGGTTTAAATAAAGAACCATGATTATCTGTATAACTGAT s panTro5.chr4 135071083 99 + 194502333 CTAAATG----------------------------------------A----ATTTTTCTTTATGTTTGATGCATAAGC---TT---CTCTGCTTTCTTTC--------------------------------TA-TTTT--TTGTGGTTTAAATAAAGAACCATGATTATCTGTATAACTGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51484 103 - 70559 CTAAATG----------------------------------------ACTGAATTTTTctttatgttttatgcttaagc---tt---ctctgctttctttc--------------------------------ta-tttt--ttgtggtttaAATAAAGAACCATGATTATCTGTATAACTGAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465094 103 - 115148730 CTAAATG----------------------------------------ACTAAATTTTTctttatgttttatgcataagc---tt---ctctgctttctttc--------------------------------ta-tttt--ttgtggtttaAATAAAGAACCATGATTATCTGTATAGCTGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407257 103 + 190429646 CTAAATG----------------------------------------ACTGAATTTTTCTTTATGTTTTATGCATAAGC---TT---CTCTGCTTTCTTTC--------------------------------TA-TTTT--TTGTGGTTTAAATAAAGAACCATGATTATCTGTATAACTGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926264 103 + 189454096 CTAAATG----------------------------------------ACTGAATTTTTCTTTATGTTTTATGCATAAGC---TT---CTCTGCTTTCTTTC--------------------------------TA-TTTT--TTGTGGTTTAAATAAAGAACCATGATTATCTGTATAACTGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34917935 103 - 40319822 CTAAATG----------------------------------------ACTGAATTTTTctttatgttttatgcataagc---tt---ctctgctttctttc--------------------------------ta-tttt--ttgtggtttaAATAAAGAACCATGATTATCTGTATAACTGAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471655 103 - 9219162 CTAAATG----------------------------------------ACTGAATTTTTctttatgttttatgcataagc---tt---ctctgctttctttc--------------------------------ta-tttt--ttgtggtttaAATAAAGAACCATGATTATCTGTATAACTGAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78996848 103 + 135778131 CTAAATG----------------------------------------ACTGAATTTTTCTTTATGTTTTATGCATAAGC---TT---CTCTGCTTTCTTTC--------------------------------TA-TTTT--TTGTGATTTAAATAAAGAACCATGATTATCTGTATAACTGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766608 103 - 3013352 CTAAATG----------------------------------------ACTGAATTTTTctttatgttttatgcataagc---tt---ctctgctttctttc--------------------------------ta-tttt--ttgtggtttaAATAAAGAACCATGATTATCTGTATAACTGAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5994965 103 + 8656713 CTAAATG----------------------------------------ACTGAATTTTTCTTTATGTTTTATGCATAAGC---TT---CTCTGCTTTCTTTC--------------------------------TA-TTTT--TTGTGGTTTAAATAAAGAACCATGATTATCTGTATAACTGAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129424593 104 - 190850796 CTAAATG----------------------------------------ACTGAATTTTTCTTTATGTTTTATGCATAAAC---TT---CTCTGCTTTCTTTT--------------------------------GGTTTTT--TTGTGGTTTAAATAAAGAGCTATGATTATCTGTATAAATGAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6508939 103 - 25294431 CTAAATG----------------------------------------ACTAAATTTTTCTTTATGTTTTATGCATAAGC---TT---CTCTGCTTTCTTTT--------------------------------GA-TTTT--TTGTGGTTTAAATAAAGAGCTATGATTATGTGTATAAATGAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4063725 99 - 6311556 CTAAATG----------------------------------------ACTAAAgt----tttatgttttatgcataagc---tt---ctctgctttctttt--------------------------------ga-tttt--ttgtggtttaAATAAAGAGCTATGATTATCTGTATAAATGAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919326 103 + 15034901 GTAAATG----------------------------------------ACTGAATTTTTCTTTATGTTTTATGCACAAGC---TT---CTCTGCTTTCTTTT--------------------------------GA-TTTT--TTGTGGTTTAAATAAAGAGCTATGATTATCTGTATAAATGAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26326701 99 - 93316391 ATAAATG----------------------------------------ACAGAATATTTCTTTATGTTTTATGCATAAGC---TT---CTCTGCTTTCT------------------------------------A-TTTT--TTGTCCTTTAACTAAGGAACTATGATTATCTGTAAAACTGAT i micMur3.chr14 C 0 C 0 s canFam3.chr19 44044968 176 - 53741614 ctgaaggcagatgcacagtcgctgagccacccaggcgtcccACAAAAACTGGATTTTTC--TATGTTTTATGCATAAGCTTGTT---CTTTATTTTCTTTCATTtctttctctctctctctctctctctctctct-TTTT--TTGTGGTTTAAATAAAGAACTATGATTATCTATAAAACTGAT i canFam3.chr19 I 125 C 0 s dasNov3.JH569232 1760021 108 + 5974691 CCAAATG----------------------------------------ACTGGATTCTTCTTTATGTTTTATTCATAAGC---TTTCCCTTTGCTTTTTTCC--------------------------------TT-TTTTGAGTGTAGTTTAAATAAAGAACTATGATTATATGTAAAACTGAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 941924 565 - 3201129 M a score=1623295.000000 s hg38.chr9_KI270719v1_random 46363 129 + 176845 TGCT-CAAAGTAATTAAT-CATTTTTCTTTTGAAATTACCAGGGTAAATTAAGAATCTTATAATTACAGAGTTTTCTCTTGCCTAGAGGAAACATACTGAGAAACTGTGTTAGGAAATTATTATTTCAAAA s panTro5.chr4 135071182 129 + 194502333 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTACCAGGGCAAATTAAGAATCTTATAATTACAGAGTTTTCTCTGGTCTAGAGGAAACATACTGAGAAACTGTGTTAGGAAATTATTATTTCAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51587 129 - 70559 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTATAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAACTGTGTTAGGAAATTATTATTTCAAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465197 129 - 115148730 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTATAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAACTGTGTTAGGAAATTATTATTTCAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407360 127 + 190429646 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTACAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAAC--TGTTAGGAAATTATTATTTCAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926367 127 + 189454096 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTACAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAAC--TGTTAGGAAATTATTATTTCAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918038 127 - 40319822 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTACAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAAC--TGTTAGGAAATTATCATTTCAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471758 127 - 9219162 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTACAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAAC--TGTTAGGAAATTATTATTTCAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78996951 127 + 135778131 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTACAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAAC--TGTTAGGAAATTATTATTTCAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766711 127 - 3013352 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTACAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAAC--TGTTAGGAAATTATTATTTCAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995068 127 + 8656713 TGCT-CAAAGTAATTAAT-CATTTTCCTTATGAAATTACCAGGGTAAATTAAGAATCTTATAATTGCAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAAC--TGTTAGGAAATTATTATTTCAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129424697 122 - 190850796 TGCT-CTAAGTA--------ATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTATAATTACAGAGTTTTCTCTTGTCTAGAGGAAACATACTAAGAAAACATGTTAGGAAATCATTATTTCAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509042 125 - 25294431 TGCT-CTAAGTA----AT-CATTTTTCTTATGAAATTACCAGGATAAATTAAGAATCTTATAATGACAGAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAACTATATTAGGAAATCATTATTTCAAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4063824 125 - 6311556 TGCT-CTAAGTA----AT-CATTTTTCTTATGAAATTACCAGGATAAATTAAGAATCTTATAATTACACAGTTTTCTCTTGTCTAGAGGAAACATACTGAGAAACTATGTTAGGAAATCATTATTTCAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919429 125 + 15034901 TGCT-CTAAGTA----AT-CATTTTTCTTATGAAATTACCAGGGTAAATTAAGAATCTTATAATTACAGAGTTTTCTCTTGTCTAGAGGAAATATGCTGAGAAACTATGTTAGGAAATCATTATTTCAAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26326800 127 - 93316391 TGCT-CAAAGTAATTAAT-CATATTTCTTATGAAATTACCAGAGTAAATTAAGAATCTTATAATTAAAGAGTTTTCCTTTGTCTAAATGAAACATGGTGAGAGAC--TGTTAGAAAATTACTATTTCAAAA i micMur3.chr14 C 0 I 291 s otoGar3.GL873702 942490 122 - 3201129 TGCT-CAAAGTAATTAAT-CATTTTTCTTATGAAATTATCAGGGTAAATTAAGAATC------TTAAAGAGTTTTCTCTTGTC-ATATGAAACATGATGAGAGACTGTGTTATAAAATTGCTATTTTAAAA i otoGar3.GL873702 M 565 C 0 s canFam3.chr19 44045144 129 - 53741614 TGCTCCAAAGTAATTAATATTTTTTTCTTATGAAATTACCAGGATAAATTAAAACTCTTATAATTAAATAGTTTTCTCTTGTGTAAATAAAACATGCTGAGAGAC--TGTTGGAAAATTATTATTCCAAAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1760129 112 + 5974691 TGCT-CAGAGTAATTAAT-CATTTTTCTAATGAAATTACCAGAGTAAATTAAGAATCTTATAATT--AAAGTTTTCTCTTGTGTAAATGAAATATGCT---------------AAAATTACTATTTCAAAA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=186911.000000 s hg38.chr9_KI270719v1_random 46492 32 + 176845 CCCAGTC----TAAGTTCTTAGCCACTGGACAT-----------------------------TT-A s panTro5.chr4 135071311 32 + 194502333 CCCAGTC----TAAGTTCTTAGCCACTGGACTT-----------------------------TA-A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51716 32 - 70559 CCCAGTC----TAAGTTCTTAGCCACTGGACTT-----------------------------TA-A i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465326 36 - 115148730 CCCAGTCAAATTAAGTTCTTACCCACTGGACTT-----------------------------TA-A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407487 31 + 190429646 CTCAGTC-----AAATGCTTACCCACTGGACTT-----------------------------TA-A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926494 31 + 189454096 CTCAGTC-----AAATGCTTACCCACTGGACTT-----------------------------TA-A i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918165 31 - 40319822 CTCAGTC-----AAATGCTTACCCACTGGACTT-----------------------------TT-A i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471885 31 - 9219162 CTCAGTC-----AAATTCTTACCCACTGGACTT-----------------------------TA-A i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997078 31 + 135778131 CTCAGTC-----AAATTCTTACCCACTGGACTT-----------------------------TA-A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766838 31 - 3013352 CTCAGTC-----AAATTCTTACCCATTGGACTT-----------------------------TA-A i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995195 31 + 8656713 CTCAGTC-----AAATTCTTACCCACTGGACTT-----------------------------TA-A i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129424819 37 - 190850796 GCCAATAAAATTAAGTTCTTACCCACTGGACTT-----------------------------TGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509167 36 - 25294431 GCCAATCAAATTAAGTCCTTACTCACTGGACTT-----------------------------TT-A i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4063949 37 - 6311556 GCCAATCAAATTAAGTTCTTACCCACTGGACTT-----------------------------TAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919554 37 + 15034901 GCCAATCAAATTAACTTCTTATCCACTGGACTT-----------------------------TGAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 942612 65 - 3201129 ACCAATCAAATTAACACCTtatacactatatatatacatatgtatacatacacacacacacata-t i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44045273 36 - 53741614 ACCAATCAAATTAAGTCCTCATAGACTGAAAAT-----------------------------AT-A i canFam3.chr19 C 0 I 5478 s dasNov3.JH569232 1760241 33 + 5974691 --CCATCAAATCATGTCCTTTTACAATGAAGTT-----------------------------TA-- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=685609.000000 s hg38.chr9_KI270719v1_random 46524 81 + 176845 AAAAA-TACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTTCAGATTT-CCACATT-TCTTAAATGAAAA s panTro5.chr4 135071343 82 + 194502333 AAAAAATACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTTCAGATTT-CCACATT-TCTTAAATGAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51748 81 - 70559 AAAAA-TACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTTCAGATTT-CCACATT-TCTTAAATGAAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465362 81 - 115148730 AGAAA-TACATAT--------------TACATATAC--------------------------------------------TTTTCCTAACATGATTGAGAATATAGTTTGTTTCAGATTT-CCACGTT-TGTTAAATGAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407518 81 + 190429646 AAAAC-TACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTACAGATTT-CCACATT-TCTTAAATGAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926525 81 + 189454096 AAAAC-TACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTACAGATTT-CCACATT-TCTTAAATGAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918196 81 - 40319822 AAAAC-TACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTACAGATTT-CCACATT-TCTTAAATGAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471916 81 - 9219162 AAAAC-TACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTACAGATTT-CCACATT-TCTTAAATGAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997109 81 + 135778131 AAAAC-TACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTACAGATTT-CCACATT-TCTTAAATGAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766869 81 - 3013352 AAAAC-TACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTACAGATTT-CCACATT-TCTTAAATGAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995226 81 + 8656713 AAAAC-TACATAT--------------TACATATAC--------------------------------------------TTTTTCTAACATGATTGAGAATATAGTTTGTTACAGATTT-CCACATT-TCTTAAATGAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129424856 79 - 190850796 AAAAA-TACATAT--------------TACAAA-----------------------------------------------TTTTTTTAACATGATTGAGAATATGGTTTGTTTCATATTTCCCACACT-TCTTAAATGAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509203 81 - 25294431 AAAAA-TACATAT--------------TATACATAT--------------------------------------------TTTTTCTAACATGATTGAGAATATGATTTGTTTCTGATTT-CCACACT-TCTTAAATGAAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4063986 81 - 6311556 AAAAA-TACATAT--------------TATACATAT--------------------------------------------TTTTTCTAATATGATTGAGAATATGATTTGTTTCAGATTT-CCACACT-TCTTAAATGAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919591 81 + 15034901 AAAAA-CACATAT--------------TACACATAT--------------------------------------------TTTTTCTAACATGATTGAGAATATGGTTTGTTTCAGATTT-CCACACT-TCTTAAATGAAAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 942677 140 - 3201129 atata-cacatatGCCGTGTGTGCGTGTATATATACACACAAACACAGACTCACATATATTATATACCTTTTTATATATTTCTTTCTAACATTAATAACAATACATATTTTCTCAGATTT-TCACATTATGTTAAAAGGAAA i otoGar3.GL873702 C 0 I 7 s dasNov3.JH569232 1760274 43 + 5974691 ----a-tatata---------------tatacacac--------------------------------------------------------------aaatata--------------t-acatata-aattatatgaaa- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44045309 5478 - 53741614 I a score=244441.000000 s hg38.chr9_KI270719v1_random 46605 33 + 176845 CAATAAAGAATTCAAAAGGCAAAAGGTACTG-TA s panTro5.chr4 135071425 33 + 194502333 CAATAAAGAATTCAAAAGGCAAAAGGTACTG-TA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51829 32 - 70559 -AATAAAGAATTCAAAAGGCAAAAGGTACTG-TA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465443 33 - 115148730 CAATAAAGAATTCAAAAGGCAAAAGTTATCG-TA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407599 34 + 190429646 CAATAAAGAATTCAAAAGGCAAAAAGGGTCATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926606 34 + 189454096 CAATAAAGAATTCAAAAGGCAAAAAGGGTCATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918277 34 - 40319822 CAATAAAGAATTCAAAAGGCAAAAAGGGTCATTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4471997 33 - 9219162 CAATAAAGAATTCAAAAGGCAAAAAGGATCA-TA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997190 34 + 135778131 CAATAAAGAATTCAAAAGGCAAAAAGGATCATTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766950 34 - 3013352 CAATAAAGAATTCAAAAGGCAAAAAGGATCATTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995307 34 + 8656713 CAATAAAGAATTCAAAAGGCAAAAGGTATTGTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129424935 33 - 190850796 CAATAAAGAATTAAAAAGGCAAAAAGTATTG-TA i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6509284 33 - 25294431 CAATAAAGGATTCAAAAGGTAAAAGGTATTG-CA i saiBol1.JH378129 C 0 I 3 s cebCap1.NW_016107420v1 4064067 33 - 6311556 CAATAAAGAATTTAAAAGGCAAAAGGTATTG-TA i cebCap1.NW_016107420v1 C 0 I 2 s aotNan1.NW_018507635v1 14919672 33 + 15034901 CAATAGAGAATTCAAAAGGCAAAAGGTATTG-TA i aotNan1.NW_018507635v1 C 0 I 2 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1760317 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44045309 5478 - 53741614 I e otoGar3.GL873702 942817 7 - 3201129 I a score=218981.000000 s hg38.chr9_KI270719v1_random 46638 31 + 176845 A---AAAAA---GTTATTTGATCAC-ATGTAAATGAAA s panTro5.chr4 135071458 34 + 194502333 A---AAAAAAAAGGTATTTGATCTC-ATGTAAATTAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51861 31 - 70559 A---AAAAA--AAGTA-TTGATCTC-ATGTAAATGAAA i gorGor5.CYUI01001450v1 C 0 I 170 s nomLeu3.chr7b 90465476 31 - 115148730 A---AAAAA---GGTATTTGATCAC-ATGTAAATGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407633 32 + 190429646 A---AAAAA--AAGTATTTGATCAT-ATGTAAATGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926640 32 + 189454096 A---AAAAA--AGGTATTTGATCAT-ATGTAAATGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918311 32 - 40319822 A---AAAAA--AGGTATTTGATCAT-ATGTAAATGAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472030 32 - 9219162 A---AAAAA--AGGCATTTGATCAT-ATGTAAATGAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997224 33 + 135778131 A--GAAAAA--AGGTATTTGATCAT-ATGTAAATGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2766984 32 - 3013352 A---AAAAA--AGGTATTTGATCAT-ATGTAAATGAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995341 35 + 8656713 AAAAAAAAA--AGGTAATTGATCAT-ATGTAAATGAGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129424970 32 - 190850796 A---AAAAA--GGTTATCTGACCAC-ATGTAAATGACA i calJac3.chr3 I 2 C 0 s saiBol1.JH378129 6509320 32 - 25294431 A---AAAAA--AGTTATTTGATCAC-ATGTAAATGACA i saiBol1.JH378129 I 3 C 0 s cebCap1.NW_016107420v1 4064102 32 - 6311556 A---AAAAA--GGTTATTTGATCAC-ATGTAAATGACA i cebCap1.NW_016107420v1 I 2 C 0 s aotNan1.NW_018507635v1 14919707 32 + 15034901 A---AAAAA--GGCTATTTGATCAC-ATGTAAATGACA i aotNan1.NW_018507635v1 I 2 C 0 s otoGar3.GL873702 942824 32 - 3201129 ----AAAAC--AGTTATTTGACCACAATGTAAATGGAA i otoGar3.GL873702 I 7 C 0 s dasNov3.JH569232 1760317 15 + 5974691 --------------tatatg--cat-ataCAA------ i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44045309 5478 - 53741614 I a score=294370.000000 s hg38.chr9_KI270719v1_random 46669 48 + 176845 ATTCTACCTT--CTTATTGAATTTTACTAATTAGAGGGGTAATTATTCTC--- s panTro5.chr4 135071492 44 + 194502333 ATCCTACACT--CTCACTGAATTTTACTA----GAGAGGAACTTATTGTC--- i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90465507 44 - 115148730 ATCCTACCCT--CTCATTGAATTTTACTA----GAGGGGAACTTATTGTT--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407665 44 + 190429646 ATCCTACCCT--CTCACTGAATTTTACTA----GAGGGGTAATTATTGTT--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926672 44 + 189454096 ATCCTACCCT--CTCACTGAATTTTACTA----GAGGGGTAATTATTGTT--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918343 44 - 40319822 ATCCTACCCT--CTCATTGAATTTTACTA----GAGGGGTACTTATTGTT--- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472062 44 - 9219162 ATCCTACCCT--CTCATTGAATTTTACTA----GAGGGGTACTTATTGTT--- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997257 44 + 135778131 ATCCTGCCCT--CTCATTGAATTTTACTA----GAGGGGTACTTATTGTT--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767016 44 - 3013352 ATCCTACCCT--CTCATTGAATTTTACTA----GAGGGGTACTTATTGTT--- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995376 44 + 8656713 ATCCTATCCT--CTCATTGAATTTTACTA----GAGGGGTACTTATTGTT--- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425002 44 - 190850796 ATCCTACCCT--CTCACTGAGTTTTCCTA----GAGGGGTACTTACTGTT--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509352 43 - 25294431 ATCCTACCCT--CTCACTGA-TTTTCCTA----GAGGGGTACTAATTGTT--- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064134 43 - 6311556 ATCCTACCCT--CTTATTGA-GTTTTCTA----GAGGGGTACTTATTGTT--- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919739 44 + 15034901 ATCCTACCCT--CTCACTGAGTTTTCCTA----AAGGGGTACTTATTGTT--- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 942856 49 - 3201129 ATCTCACCTTC-CTTGTGGAATTTTGTTGATTGGAAGGATACTTATTTTT--- i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1760332 30 + 5974691 ----------TATGTGTTAAATATTACAT-------------CTATTTTTCTA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44045309 5478 - 53741614 I e gorGor5.CYUI01001450v1 51892 170 - 70559 I a score=213476.000000 s hg38.chr9_KI270719v1_random 46717 25 + 176845 ACATCAGATTATTTGCACAAGATAC s panTro5.chr4 135071536 25 + 194502333 ACTTCAGGTTGTTTGTTCAAGATAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52062 25 - 70559 GCATCAGATTATTTGCACAAGATAC i gorGor5.CYUI01001450v1 I 170 T 143 s nomLeu3.chr7b 90465551 25 - 115148730 ACATCAGATTGTTTGTTCAAGACAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407709 25 + 190429646 ACATCAGATTGTTTGTTCAAGACAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926716 25 + 189454096 ACATCAGATTGTTTGTTCAAGACAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918387 25 - 40319822 ACATCAGATTGTTTGTTCGAGACAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472106 25 - 9219162 ACATCAGATTGTTTGTTCAAGACAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997301 25 + 135778131 ACATCAGATTGTTTGTTCAAGACAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767060 25 - 3013352 ACATCAGATTGTTTGTTCAAGACAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995420 25 + 8656713 ACATCAGATTGTTTGTTCAAGACAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425046 25 - 190850796 GCATCAGATTGTTTGTACAAGACAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509395 21 - 25294431 GCATCAGA----TTGTACAAGACAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064177 25 - 6311556 GCCTCAGATTGTTTGTACAAGACAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919783 25 + 15034901 GCAACAGCTTGTTTGTACAAGACAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 942905 25 - 3201129 GCATCAGATCATTTGTACAAGGTAC i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1760362 18 + 5974691 ACATCA------TTG-ACAATATAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44045309 5478 - 53741614 I a score=206094.000000 s hg38.chr9_KI270719v1_random 46742 25 + 176845 -----TATTTCTGATGTATTTTATTAAAGA-- s panTro5.chr4 135071561 25 + 194502333 -----TATTTCTGATGTATTTTATTAAAGA-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51944 19 - 70559 -----TATTTCTGATTT------TTTAAAA-- i gorGor5.CYUI01001450v1 T 143 C 0 s nomLeu3.chr7b 90465576 25 - 115148730 -----TATTTCTGATGTTTTTTATTAAAGA-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407734 25 + 190429646 -----TATTTCTGACGTATTTTATTAAATA-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926741 25 + 189454096 -----TATTTCTGACGTATTTTATTAAATA-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918412 25 - 40319822 -----TATTTCTGACGTATTTTATTAAATA-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472131 25 - 9219162 -----TATTTCTGACGTATTTTATTAAAGA-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997326 25 + 135778131 -----TATTTCTGACGTATTTTATTAAAGA-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767085 25 - 3013352 -----TATTTCTGATGTATTTTATTAAAGA-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995445 25 + 8656713 -----TATTTCTGATGTATTTTATTAAAGA-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425071 25 - 190850796 -----TATTTCTGATGTATTTTATTAAAGA-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509416 25 - 25294431 -----TGTTTCTGCTGTATTTTATTAAAGC-- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064202 25 - 6311556 -----TATTTCTGATATATTTTATTAAAGC-- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919808 25 + 15034901 -----TATTTCTGATGTATTTTATTAAATA-- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 942930 25 - 3201129 -----CATTTCTGATCTATTTTATGAAAAA-- i otoGar3.GL873702 C 0 T 138 s dasNov3.JH569232 1760380 32 + 5974691 TGTTTCAATTTTTTCGCATTTCTTTCAAAGGA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44045309 5478 - 53741614 I a score=105295.000000 s hg38.chr9_KI270719v1_random 46767 16 + 176845 -ATTCAAAAGGCAAAGG s panTro5.chr4 135071586 16 + 194502333 -ATTCAAAAGGCAAAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51963 15 - 70559 -ATTC-AAAGGCAAAGG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465601 16 - 115148730 -ATTCAAAAGGCAAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407759 16 + 190429646 -ATTCAAACGGGAAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926766 16 + 189454096 -ATTCAAACGGGAAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918437 16 - 40319822 -ATTCAAACGGGAAAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472156 16 - 9219162 -ATTCAAACGGGAAAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997351 16 + 135778131 -ATTCAAACGGGAAAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767110 16 - 3013352 -ATTCAAACGGGAAAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995470 16 + 8656713 -CTTCAAATGGGAAAGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425096 16 - 190850796 -ATTCAAAAGGCAAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509441 16 - 25294431 -ATTCAAAAGGTAAAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064227 16 - 6311556 -ATTCAAAAGGTAAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919833 16 + 15034901 -ATTCAGAAGGTAAAAA i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1760412 16 + 5974691 AACACAAAGGCACAAG- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44045309 5478 - 53741614 I e otoGar3.GL873702 942955 138 - 3201129 T a score=436671.000000 s hg38.chr9_KI270719v1_random 46783 49 + 176845 TATTGT-----AAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TTCTACCTT-C-- s panTro5.chr4 135071602 49 + 194502333 TATTGT-----AAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TTCTACCTT-C-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 51978 47 - 70559 TATTGT------AAAAAAGTTATTTGATCACA--G-TAAATG-AAAA-TTCTACCTT-C-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465617 49 - 115148730 TATTTT-----AATAAAAGGTATTTGATCACA-TG-TAAATG-AAAA-TCTTACCTT-C-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407775 50 + 190429646 TATTGT----TAAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TCCTGCCTT-C-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926782 50 + 189454096 TATTGT----TAAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TCCTGCCTT-C-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918453 50 - 40319822 TATTGT----TAAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TCCTGCCTT-C-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472172 50 - 9219162 TATTGT----AAAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TCCTGCCTT-C-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997367 50 + 135778131 TATTGT----AAAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TCCTGCCTT-C-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767126 50 - 3013352 TATTGT----AAAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TCCTGCCTT-C-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995486 50 + 8656713 TATTGT----AAAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TCCTGCCTT-C-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425112 50 - 190850796 TATTG----CAAAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-ACCTACCTT-C-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509457 51 - 25294431 TATTGT---TAAAAAAAAGTTATTTGATCACA-TG-TAAATG-AAAA-TCCTACCTT-C-- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064243 54 - 6311556 TATTGTAAAAAAAAAAAAGGTATTTGATCACA-TG-TAAATG-AAAA-TCTTACCTT-C-- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919849 50 + 15034901 TATTAT-----AAAAAAAGTTATTTGATCACA-TG-TAAATGAAAAA-TCCTACCTT-C-- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 942817 51 - 3201129 TGTTAA-----CAAAACAGTTATTTGACCACAATG-TAAATG-GAAA-TCTCACCTTCC-- i otoGar3.GL873702 T 138 C 0 s dasNov3.JH569232 1760428 49 + 5974691 ---------AAAAAAACAGTTATTTGATTAAA-TGTTAAATG-AAAAGTCCTACCTG-CTC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44045309 5478 - 53741614 I a score=1372099.000000 s hg38.chr9_KI270719v1_random 46832 145 + 176845 TTATTGAATTTTACTAATTAGAGGGGTAATTATTCTGGCATCAGATTATTTGCACAAGATACTATTTCT--GACCTATTTTATTAAAAGTCACCATTTATTATTGGTTTTCATCTCATGTTATATATGCAAATGAAACTCCT-TTGAG s panTro5.chr4 135071651 145 + 194502333 TTATTGAATTTTACTAATTAGAGGGGTAATTATTCTCACATCAGATTATTTGCACAAGATACTATTTCT--GATCTATTTTATTAAAAGTCACCATTTATTATTGGTTTTCATCTCATGTTATATATGCAAATGAAACTCAT-TTGAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52025 144 - 70559 TTATTGAATTTTACTAATTAGAGGGGTAATTATTCTCGCATCAGATTATTTGCACAAGATACTATTTCT--GATCTA-TTTATTAAAAGTCACCATTTATTATTGGTTTTCATCTCATGTTATATATGCAAATGAAACTCCT-TTGAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465666 145 - 115148730 TCACTGAATTTTATTAATTAGAGGAGTAATTATTCTCACATCAGATTATTTGCACAAGATACTATTTCT--GATCTATTTTATTAAAAGTCAGCATTTATTATTGGTTTTCATCTCATGTTATATATGCAAATGAAACTCCT-TTGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407825 144 + 190429646 TCATTGAATTTTACTAATTA-AGGGGTACTTATTCTCGAATCAGATTGTTTGCACAAGATACTATTTCT--GATCTATTTTATTAAAAGTCAGCATTTATTATGGGCTTTCATCTCATGGTATATATGCAAATGAAACTCCT-TTGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926832 144 + 189454096 TCATTGAATTTTACTAATTA-AGGGGTACTTATTCTCGAATCAGATTGTTTGCACAAGATACTATTTCT--GATCTATTTTATTAAAAGTCAGCATTTATTATGGGCTTTCATCTCATGGTATATATGCAAATGAAACTCCT-TTGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918503 144 - 40319822 TCATTGAATTTTACTAATTA-AGGGGTACTTATTCTCGAATCAGATTATTTGCACAAGATACTATTTCT--GATCTATTTTATTAAAAGTCAGCATTTATTATGGGCTTTCATCTCATGGTATATATGCAAATGAAACTCCT-TTGAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472222 144 - 9219162 TCATTGAATTTTACTAATTA-AGCGGTGCTTATGCTCGAATCAGATTATTTGCACAAGATACTATTTCT--GATCTATTTTATTAAAAGTTAGCATTTGTTATGGGCTTTCATCTCATGGTATATATGCAAATGAAACTCCT-TTGAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997417 144 + 135778131 TCATTGAATTTTACTAATTA-AGGTGTACTTATTCTCGAATCAGATTATTTGCACAAGATACTATTTCT--GATCTATTTTATTAAAAGTCAGCATTTATTATGGGCTTTCATCTCATGGTATATATGAAAATGAAACTCCT-TTGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767176 144 - 3013352 TCATTGAATTTTACTAATTA-AGGGGTACTTATTCTCGAATCAGATTATTTGCACAAGATACTATTTCT--AATCTATTTTATTAAAAGTCAGCATTTATTATGGGCTTTCATCTCATGGTATATATGCAAATGAAACTCCT-TTGAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995536 144 + 8656713 TCATTGAATTTTACTAATTA-AGGGGTACTTATTCTCGAATCAGATTATTTACACAAGATACGATTTCT--GATCTATTTTATTAAAAGTCAGTATTTATTATGGGCTTTCATCTCATGGTATATATGCAAATGAAACTCCT-TTGAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425162 141 - 190850796 TCATTAAATTTTACTAATTGCAGGGGTAATTATTCTTGAATCTGATTATTTGCACAAGATACTATTTCC--AATCTATTTTATCAAAAGTCAGCA----TTATTGGCTTTCAGCTTATGGTATATATACAAATGAAACTCCT-TTGAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509508 134 - 25294431 TCATTGAAT-----TAGT----GGGGTACGTATTCTCGAATCAGATTATTTGCACAAGATACTATTTCCGAGATCTATTTTCTCAAAAGTCAGAC----TTACTGGCTTTCATCTTGTGGTATATATGCAAATGAAACTCCA-TTGAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064297 141 - 6311556 TCATTGAATTTTACTAATTAGAGGGGTACTTATTCTCGAATCAGATTATTTGCACAAGATACTATTTCC--GATCTATTTTATCAAAAGTCAGCA----TTATTAGCTTTCATCTTATGGTATATATGAAAATGAAACTCCT-TTGAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14919899 141 + 15034901 TCATTGAATTTTACTAATTAGAGGGGTACTTATTCTCGCATCAGATTATTTGTACAAGATACTATTTCC--GATCTATTTTACCAAAAGTCAGCA----TTATTGGCTTTCATCTTATGGTATATATGCAAATGAAACTTCT-TTGAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 942868 137 - 3201129 TTGTGGAATTTTGTTGATTGGAAGGATACTTATTTTTGCATCAGATCATTTGTACAAGGTACCATTTCT--GATCTATTTTATGAAAAATCAGCA----TTATTGGCCTTCATCTCATGGTATATATTCAAATGAAACTCAA-T---- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 9695069 136 + 53741614 TTATGACATTGCACTTGCTAGAAGAGTACTTATTCTTGCAGCAGATGATGTGTTCAATGTCTTATTTGT--AGACTATTTTGTTAAAAATAAGCA----TCA-----TTTTATCTCATGGTCTATCTTTCAATGAAACTCAG-GTTAG i canFam3.chr19 n 5478 I 3 s dasNov3.JH569232 1760477 127 + 5974691 TTCTCACATTTTA-TCTTTAGCAGCACACCTATTTTTACATCAGATTATTTCTATAATGTATTATTTCT--ACTCTATTTTATTA------------------TGGTTTTAATCACAGGGTATGTATTCAAGTGAAACTCAGATTTAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26326927 291 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=476029.000000 s hg38.chr9_KI270719v1_random 46977 41 + 176845 TATGCAATGGTTATTTACTGCAGTGAATATTGTACAATCAT s panTro5.chr4 135071796 41 + 194502333 TATGCAACGGTTATTTACTGCAGTGAATATTGTATAATCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52169 41 - 70559 TATGCAACGGTTATTTACTGCAGTGAATATTGTATAATCAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465811 41 - 115148730 TATGCAACGGTTATTTACTGCAGTGAATATTGTATAATCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131407969 41 + 190429646 TATGCAATGGTTATTTACTGCAGTGAATGTTGTATAATCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130926976 41 + 189454096 TATGCAATGGTTATTTACTGCAGTGAATGTTGTATAATCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918647 41 - 40319822 TATGCAATGGTTATTTACTGCAATGAATGTTGTATAATCAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472366 41 - 9219162 TATGCAATGGTTATTTACTGCAGTGAATGTTGTATAATCAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997561 41 + 135778131 TATGCAATGGTTATTTACTGCAGTGAATGTTGTATAATCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767320 41 - 3013352 TATGCAATGGTTATTTACTGCAGTGAATGTTGTATAATCAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995680 41 + 8656713 TATGCAACGGTTATTTACCTCAGTGAATGTTGTATAATCAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425303 41 - 190850796 TATTCAACAATGATTTACTGCAGTGAGTACTGTATAATCAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509642 41 - 25294431 CATGCAACAATTATTTACTGCAGTGAGTATTGCATAATCAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064438 41 - 6311556 TATGCAACAATTATTTACTGCAGTGAGTATTGTATAATCAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14920040 41 + 15034901 TATGCAACAATTATTTACTGCAGTGAGTATTGTATAATCAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26327218 41 - 93316391 TATGCAATGGTTACTTATTTTAGTGAATATTGTATAATCAT i micMur3.chr14 I 291 I 228 s otoGar3.GL873702 943005 37 - 3201129 TACACAATGG----CAATTTCAGCGAATATGGTATAATTAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 9695208 36 + 53741614 TATAAAATTGCTATGTACATCAGTGAATATT-----ATCAT i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1760604 41 + 5974691 TATGCAAATGTCATTTACTTCAGTAAGTATTATATAGTAAT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1821278.000000 s hg38.chr9_KI270719v1_random 47018 189 + 176845 ATTTATCAAAATGTTCTTCTTCAAAATATTTTTCTAATGCTTATTAG--CAA--GC--AGTTTTTATATTT-GAGAAAG-TGAAACG----TGGACTTTAGAATCAGATTTAGGCCATA----TGGTAAGCCAG-CT-GCCTGAAAAATCTTCATAA-CAAATGC---TAATATTGATGAATTTTGGAGATGTCAT--------------------------------------------TATATATGTATACCT s panTro5.chr4 135071837 189 + 194502333 ATTTATCAAAATGTTCTTCTTTGAAATATTTTTCTAATGCTTATTAG--CAA--AC--AGTTTTTATATTT-GAGAAAG-TAAAACT----TGGACTTTAGAATCAGATTTAGGCCATA----TGGTAAGCCAG-TT-GCCTGAAAAATCTTCATAA-CAAATGC---TAATATTGATGAATTTTGGAGATGTCAT--------------------------------------------TATATATGTATACCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52210 188 - 70559 ATTTGTCAAAATGTTCTTCTT-GAAATATTTTTCTAATGCTTATTAG--CAA--AC--AGTTTTTATATTT-GAGAAAG-TGAAACG----TGGACTTTAGAATCAGATTTAGGCCATA----TGTTAAGCCAG-TT-GCCTGAAAAATCTTCATAA-CAAATGC---TAATATTGATGAATTTTGGAGATGTCAT--------------------------------------------TATATATGTATACCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90465852 184 - 115148730 ATTTATCAAAA---TCTTCTTTGAAATATTTTTCTAATGCTTATTAG--CAA--AC--AGTTTTTATACTT-GAGAAAG-TAAAACT----TGGACTTTAGAATCAGATTTAGGCCATA----TGGTAAGCCAG-TT-ACCTGAAAAATCTTCTTAA-CAAATGT---TAATATTGATGAATTTTGGAGATGTCAT--------------------------------------------TATATCTG--TACCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131408010 189 + 190429646 ATTTATCAAAATGTTCTTCTTTGAAATATTTTTCTAATGCTTATTAG--CAA--AC--AGTTTTTAAATTT-TAGAAAG-TAAAACT----TGGACTTTAGAATCAGATTTAGGCCATA----TGGTAAGACAG-GT-ACCAGAAAAATCTTAATAA-TAAATGC---TAATACTGATGAATTTTGGAGATGTCAT--------------------------------------------TACATATGTATACCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130927017 189 + 189454096 ATTTATCAAAATGTTCTTCTTTGAAATATTTTTCTAATGCTTATTAG--CAA--AC--AGTTTTTAAATTT-TAGAAAG-TAAAACT----TGGACTTTAGAATCAGATTTAGGCCATA----TGGTAAGACAG-GT-ACCAGAAAAATCTTAATAA-TAAATGC---TAATACTGATGAATTTTGGAGATGTCAT--------------------------------------------TACATATGTATACCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918688 189 - 40319822 ATTTATCAAAATGTTCTTCTTTGAAATATTTTTCTAATGCTTATTAG--CAA--AC--AGTTTTTAAATTT-TAGAAAG-TAAAACT----TGGACTTTAGAATCAGATTTAGGCCATA----TGGTAAGACAG-GT-ACCAGAAAAATCTTAACAA-TAAATGC---TAATACTGATGAATTTTGGAGATGTCAT--------------------------------------------TACATATGTATACCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472407 189 - 9219162 ATTTATCAAAATGTTCTTCTTTGAAATATTTTTCTAATGCTTATTAG--CAA--AC--AGTTTTTAAATTT-TAGAAAG-TAAAACT----TGGACTTTAGAATCAGATTTAGGCCATA----TAGTAAGACAG-GT-ACCAGAAAAATCTTAATAA-TAAATGC---TAAAACTGATGAATTTTGGAGATGTCAT--------------------------------------------TACATATGTATACCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997602 189 + 135778131 ATTTATCAAAATGTTCTTCTTTGAAATATTTTTCTAATGCTTATTAG--TAA--AC--AGTTTTTAAATTT-TAGAAAG-TAAAACT----TGGATTTTAGAATCAGATTTAGGCCATA----TGGTAAGACAG-GT-ACCAGAAAAATCTTAATAA-TAAATGC---TAATACTGATGAATTTTGGAGATGTCAT--------------------------------------------TACATATGTATACCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767361 188 - 3013352 ATTTATCAAAATGTTCTTCTTTGAAATATTTTT-TAATGCTTATTAG--CAA--AA--AGTTTTTAAATTT-TAGAAAG-TAAAACT----TGGACTTTAGAATCAGATTTAGGCCATA----TGGTAAGACAG-GT-ACCAGAAAAATCTTAATAA-TAAATGC---TAATACTGATGAATTTTGGAGATGTCAT--------------------------------------------TACATATGTATACCT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995721 189 + 8656713 ATTTATCAAAATGTTCTTCTTTGAAATATTTTTCTAATGCTTATTAG--TAA--AC--AGTTTTTAAATTT-TAGAAAG-TAAAACT----TGGACTTTAGAATCAGATTTAGGCCATA----TGGTAAGCCAG-TT-ACCTGAAAAATCTTAATAA-CAAATGC---TAATATTGATGAATTTTGGAGATGTCAT--------------------------------------------TACATATGTATACCT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425344 190 - 190850796 ATTTATCAAAATG---TTCTTTGAAGTATTTTTCTAATGCTTATTAG--CAA--AT--AGCTTTTATATTT-GAGAAAG-CAAAACT----TAGATTTTAGGATCAGATTTAGATCATAAATCTGGTAAGTGAG-TT-ACCGGAAAAATTTTAATAA-TACAGGC---TAACAGTTAAGAATTTTGGAGATTTCAT--------------------------------------------TATATGTTTATAGCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509683 186 - 25294431 ATTTATCAAAATG---TTCTTTGAAGTATTTTTCTAATGCTTATTAG--CAA--AC--AGTTTTTATATTT-GAGAAAG-TAAAACT----TAGATTTTAGAATCAGATTTAGGCCATG----TGGTAAGCGAG-TT-ACCTGAAAAATTTCAATAA-TACATGC---TAACACTGAAGAATTTTGGAGATTTCAT--------------------------------------------TATATGTATATACCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064479 186 - 6311556 ATTTATCAAAATG---TTCTTTGAAGTATTTTTCTAATGCTTATTAG--CAA--AC--AGCTTTTATATTT-GAGAAAG-TGAAGCT----CAGATTTTAGAATCAGATTCAGGCCATG----TGGCAAGCGAG-TT-ACCTGAAAAATTTCAATAA-TACACAC---TAATATTGAAGAATTTTGGAGATTTCAT--------------------------------------------TATATGTGTATACCT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14920081 186 + 15034901 ATTTATCAAAATG---TTCTTTGAAGTATTTTTCTAATGCTTATTAG--CAA--AC--agcttttatattt-gagaaag-taaaact----tagattttagaatcagatttAGGCCATG----TGGTAAGCGAG-TT-ACCTGAAAAATTTCAATAA-TACCTGC---TGACATTGAAGAATTTTGAAGATTTCAT--------------------------------------------TACATGTGTATACCT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 943042 237 - 3201129 ATTTACGAAAACACTCTTGTTTGAAATATTTTTCTAAGGCTTACTTG--GAA--ACTTAAGTTTTATATCT-GAATAAA-TATAACTTGAATGGAGGTCAAAATCAGATTT--GCCATG----TGGCAGACCAG-TT-ACTTGAAATATATTAGTAA-TGAATGC---CATTATTAAAGAATTTTAGAGATTTtatatatatatatacacacacaaacacacacactatatatattcatatatatatatatatat i otoGar3.GL873702 C 0 I 51 s canFam3.chr19 9695244 191 + 53741614 ATTTG-CTAAACATTCTTCATTCAAACACTTTTCTAATGCTTATTAG--GAAGTGC--AAGTTTCATACCTAAAGAAAG-TACAACT----TGGATTTGATAATTATATTTAGTCTATA----TGGAAAGCTAGTTT-ACCTGAAAAATCTCAATAA-CAAATGC---TAATATTAA--AATTATTAGGAATTTAT-------------------------------------------ATATATACATATACCT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1760645 194 + 5974691 ATTTACCAAAACACTTTCATTTCAAACATTTTTCTAATGTTTATTAGGACAT--AT--AGGTTTTCTACCT-GTAAAGGATAAAATT----CTTGCTTTAAAATCAGATTTTGGCCACA----TGGCTGCCTAG-GTAACCTGGAAAACCTCAATAACCAAATGCTTATAATATTAA--AATTTTAGAGTTGTCAT--------------------------------------------TATATATG-ATGGCT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26327259 228 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1239982.000000 s hg38.chr9_KI270719v1_random 47207 110 + 176845 -AAAA-CTACA--GGAAAACAAAGAAAAT-----------TACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------CCAGCAAGACCAGTTGCTCTGACTTTTCCGGATGGAAAGAGAGATGGACCCA s panTro5.chr4 135072026 110 + 194502333 -AAAA-CTACA--GGAAAACAAAGAAAAT-----------TACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------CCAGCAAGACCAGTTGCTCTGACTTTTCTGGATGGCAAGAGAGATAGACCCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52398 109 - 70559 -AAAA-CTACA--GGAAAA-AAAGAAAAT-----------TACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------CCAGCAAGACCAGTTGCTCTGACTTTTCTGGATGGCAAGAGAGATGGACCCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90466036 110 - 115148730 -AAAA-CTACA--GGAAAACAAAGAAAAT-----------TACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------CCAGCAAGACCAGTTGCTCTGACTTTTCTGGACGGCAAGAGAGATGGACCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131408199 110 + 190429646 -AAAA-CTATA--GGAAAACAAAGAAAAT-----------CACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------GCAGCAAGACCAGTTGCTCTGAGTTTTCTGGATGGCAAGAGAGACAGACCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130927206 110 + 189454096 -AAAA-CTATA--GGAAAACAAAGGAAAT-----------CACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------GCAGCAAGACCAGTTGCTCTGAGTTTTCTGGATGGCAAGAGAGACAGACCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918877 110 - 40319822 -AAAA-CTATA--GGAAAACAAAGAAAAT-----------CACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------GCAGCAAGACAAGTTGCTCTGAGTTTTCTGGATGGCAAGAGAGACAGACCCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472596 110 - 9219162 -AAAA-CTATA--GGAAAACAAAGAAAAT-----------CACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------GCAGCAAGACCAGTTGCTCTGAGTTTTCTGGATGGCAAGAGAGACAGAGCCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997791 110 + 135778131 -AAAA-CTATA--GGAAAACAAAGAAAAT-----------CACCAATGCCAGAAACACAGACAACACTTAAAA---------------------------------------GCAGCAAGACCAGTTCCTCTGAGTTTTCTGGATTGCAAGAGAGACAGACCCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767549 110 - 3013352 -AAAA-CTATA--GGAAAACAAAGAAAAT-----------CACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------GCAGCAAGACCAGTTGCTCTGAGTTTTCTGGATGGCAAGAGAGACAGAGCCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5995910 110 + 8656713 -AAAA-CTATA--GGAAAACAAAGAAAAT-----------AACCAATGCCAGAAACACAGGCAACACTTAAAA---------------------------------------GCAGCAAGACCAGTTGCTCTGAGTTTTCTGGATGGCAAGAGAAACAGACCCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425534 111 - 190850796 -AAAAACTACA--GAAAAACAAAGAAAAT-----------TACCAATGCCAGAAACACAGACAACACTTAAAA---------------------------------------TCAGCAAGACCACTTGCTCTGACTTTTCTGGATGGGAAGAAAGATGGACCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509869 109 - 25294431 -AAAA--CATA--GAAAAACAAAGAAAAT-----------TACTAATGCCAGAAACACAGACAACACTTAAAC---------------------------------------CCAGCAAGACCAGTTGCTCTAACTTTTCTGTATGGGAAGAAAGATAAACCCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064665 110 - 6311556 -AAAA-CTATA--GAAAAACAAAGAAAAT-----------TACTAATGCCAGAAACACAGACAACTCTTAAAA---------------------------------------CCAGCAAGACCAATTGCTCTGACTTTTTTGGATGGGAAGAAAGATGGACCCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14920267 110 + 15034901 -AAAA-CTATA--GGAAAACAAAGAAAAT-----------TACTAATGCCAGAAACACAGACGATACTTAAAA---------------------------------------CCAGCAAGACCAGTTGCTCTGACTTTTCTGGATGGGAAGAAAGATGGACCTA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26327487 110 - 93316391 -AAAA-CTATA--GAAAAATAAGGAAGAT-----------TATCTATGCCAGAAACACAATCAACCCTTAAAA---------------------------------------CCAGCATGACCAGTTGCTCTGACATTTCTGAAAGGCAAGAGAGATGGACACA i micMur3.chr14 I 228 C 0 s otoGar3.GL873702 943330 162 - 3201129 -CAAA-CTATACTATAAAAGAAGGAAATTTTTCTGTTGTGTTTCTGTTTCAGAAACACAAGCAACATTTAAAGCCAGCATTGCCTCTGCCAGAAATGTAAGCAGTACTTCACCCAGCATGCCCAATTGCTCTGATCTTTCAGGATAACAAGAGAGATGAACACA i otoGar3.GL873702 I 51 I 866 s canFam3.chr19 9695435 110 + 53741614 -AAAA-CTAAA--GGAAAACAAAGAAAAC-----------AACTTCTGCTAGAAATATCAGCAAGACTTAATA---------------------------------------CCAACATGGCCAATTACTTTGACTTTTCTGGATGGCAGGAGATAAGGGCAAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1760839 110 + 5974691 AAATA-CTATA--GAAAAGCAGGTGAAAC-----------GACTGATACCAAAAAAACAAGGGAGAATAAAAA---------------------------------------CCAGCA-GACAGGTTGCTGCAACTTTCCTTAGTGGCAGGAAATATGGGCACA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=742807.000000 s hg38.chr9_KI270719v1_random 47317 84 + 176845 GCAATTTATAAATTTGGATTTTCTTAAGGCTCATCAGCGAAGGGGTGATGCATAGCTGGACCTAGATtgaaagagta---aataaaa s panTro5.chr4 135072136 84 + 194502333 GCAATTTATAAATTTGGATTTTCTTAAGGCTCATCAGCGAAGGGGTGATGCATAGCTGGACCTAGATtgaaagagta---aagaaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52507 83 - 70559 GCAATTTATAAATTTGGATTTTCTTAAGACTCATCAGCGAAGGGGTGATGCATAGCTGGA-CTAGATtgaaagagta---aagaaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90466146 84 - 115148730 GCAATTTACAAATTTGGATTTTATTAAAGCTCATCAGTGAAGGGGTGATGCATAGCTGGACCTAGATTGATAGAGCA---AAGAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131408309 78 + 190429646 GCAATTTATAAATTTGGATTTTATTAAAGCTCATCAGTGAAGAGGTGACGCATAGCTGGACCTAGATTGAAAGAGT---------AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130927316 78 + 189454096 GCAATTTATAAATTTGGATTTTATTAAAGCTCATCAGTGAAGAGGTGACGCATAGCTGGACCTAGATTGAAAGAGT---------AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34918987 78 - 40319822 GCAATTTATAAATTTGGATTTTATTAAAGCTCATCAGTGAAGAGGTGACGCATAGCTGGACCTAGATTGAAAGAGT---------AA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472706 78 - 9219162 GCAATTTATAAATTTGGATTTTATTAAAGCTCATCAGTGAAGAGGTGACGCATAGCTGGACCTAGATTGAAAGAGT---------AA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997901 78 + 135778131 GCAATTTATAAATTTGGATTTTGTTAAAGCTCATCAGTGAAGAGGTGACGCATAGCTGGATCTAGATTGAAAGATT---------AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767659 78 - 3013352 GCAATTTATAAATTTGGATTTTATTAAAGCTCATCAGTGAAGAGGTGACGCATAGCTGGACCTAGATTGAAAGAGT---------AA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996020 78 + 8656713 GCAATTTATAAATTCGGATTTTATTAAAGCTCATCAGTGAAGAGGTGACGCATAGCTGGACCTAGATTGAAAGCAT---------AA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425645 84 - 190850796 GCAATTTATAAATTTGAATTTTATTAAAACTCATCGTTGAAAAGATGATACATAGTGGAACCTAGAATGAAAGTGTA---AAGAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6509978 84 - 25294431 GCAATTTATAAATTTGAATTTTATTAAAGCTCATCATTGAAGAGATGATACATAgctgaacctagaacgaaagtgta---aagaaaa i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064775 84 - 6311556 GCAATTTATAAATCTGAATTTTATTGAAGCTCATTATTGAAGAGATGATACATAGCTGAACCTAGAATGAAAATGTA---AAGAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14920377 84 + 15034901 GCAATTTATAAATTTGAATTTTATTAAAGCACATCATTGAAGAGACGATACATAGCCGAACCTAGaatgaaagtgta---aagaaaa i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26327597 84 - 93316391 GCAACTTATATATTTGAATTTTATCAAAGCTCATCAATGAAGAAGTGATGAATAGCTAAACCTATAATTAGAGGACA---AACAAGA i micMur3.chr14 C 0 I 169 s canFam3.chr19 9695545 83 + 53741614 GGAACTTACAAATTGAGACTTTGTCA---CTCATTAATGAAGAGTTGATTAATAACTAGACCTATGCtgaaatggtgg-taagataa i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1760949 84 + 5974691 GCAATACACAAATTTGGGTTTTATCA---TTCATCAGTAAGAAGATGATgaatagctgcatctgtaatgaaatgacagacaagaaaa i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 943492 866 - 3201129 I a score=1725398.000000 s hg38.chr9_KI270719v1_random 47401 179 + 176845 atacttattaaccaacccagta---caattaagaag---tttgtctgtaaatactagaacaattggtag-aaaaaacaaatacatattctcccctgagaatctgtaacatcaggattatcc--------atcatgtgttgtttgacttcaaacttataaattatacagccttgagccatgaagcatcaaattaa s panTro5.chr4 135072220 179 + 194502333 atactttttaaccaacccagta---taattaagaag---tttgtctgtaaatactagaacaattggtag-aaaaaacaaatatatattctcccctgagaatctgtaacatcaggattatcc--------atcatgtgttgtttgacttcaaacttataaattgcacagccttgaaccatgaaccatcaaattaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52590 178 - 70559 atacttattaaccaacccagta---taattaagaag---tttgtctgtaaatactagaacaattggtag--aaaaacaaatatatattctcccctgagaatctgtaacatcaggattatcc--------atcatgtgttgtttgacttcaaacttataaattgtacagccttgaaccatgaaccatcaaattaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90466230 177 - 115148730 ATACTTATTAACCAACCCAGTA---TAATTaagaag---tttgtctgtaaatactagaacaattggtag-aaaaaacaaatatatattctcccctgagaatctgtaacatcagggctatct--------atcatgtgttgtttggcttcaaac--atgaattgcacagccttgaaccatgaaccgtcaaattaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131408387 178 + 190429646 ATACTTATTAACCCACACAGTA---TAATTAAGAAA---TTTGTCTGTAAATACTAGAACAATTGGTAG--AAAAACAAATATATATtctcccctgagaatctgtaacatcaaggctatcc--------atcatgtgttgtttggcttcaaacttacaaattgcacagccttgaaccatgaaccatcaaattaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130927394 178 + 189454096 ATACTTATTAACCCACACAGTA---TAATTAAGAAA---TTTGTCTGTAAATACTAGAACAATTGGTAG--AAAAACAAATATATATTCTCCCCTGAGAATCTGTAACATCAAGGCTATCC--------ATCATGTGTTGTTTGGCTTCAAACTTACAAATTGCACAGCCTTGAACCATGAACCATCAAATTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34919065 178 - 40319822 ATACTTATTAACCCACACAGTA---TAATTAAGAAA---TTTGTCTGTAAATACTAGAACAATTGGTAG--AAAAACAAATATATATtctcccctgagaatctgtaacatcaaggctgtcc--------atcatgtgttgtttggcttcaaacttacaaattgcacagccttgaaccatgaaccatcaaattaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472784 178 - 9219162 ATATTTATTAACCCACACAGTA---TAATTAAGAAG---TTTGTCTGTAAATACTAGAACAATTGGTAC--AAAAGCAAATATATATTCTCCCCTGAAAATCTGTAACATCAAGGCTATCC--------ATCATGTGTTGTTTGGCTTCAAACTTACAAATTGCACAGCCTTGAACCATGAACCATCAAATTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78997979 178 + 135778131 ATACTTATTAACCCACACAGTA---TAATTAAGAAG---TTTGTCTGTAAATACTAGAACAATTGGTAC--AAAAACAAATATATATTCTCCCCTGAGAATCTGTAACATCAAGGCTATCT--------ATCATGTGTTGTTTGTCTTCAAACTTACAAATTGCACAGCCTTGAACCATGAACCATCAAATTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767737 178 - 3013352 GTATTTATTAACCCACACAGTA---TAATTAAGAAG---TTTGTCTGTAAATACTAGAACAATTGGTAC--AAAAGCAAATATATATtctcccctgagaatctgtaacatcaaggctatcc--------atcatgtgttgtttggcttcgaacttacaaattgcacagccttgaaccatgaaccatcaaattaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996098 186 + 8656713 ATACTTATTAACCAACATAGTA---TAATTaagaag---cttgtttgtaaataccagaacaattggtag--aaaaacaaatatatattctcccctgagaatctgtaacatcaaggctatccatcatgtgatcatgtgttatttggcttcaaacttacaaattgcacagccttgaaccatgaaccatcaaattaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425729 177 - 190850796 ATACTTATTAACCAACACAGTA---TAAATAACAAG---TTTGCCTGTAAATACTAGAACAATTGTTAG-AACAAACAAATATATAT--tctcctcagaatctgtgacatcagggctatcc--------atcatgtgttgtttggcttcaaacttacaaattgcacagccttgaaccatgaaccatcaaattaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6510062 180 - 25294431 atacttattaaccaacacagta---taaataagaag---tttgcctgtaaatactagaacaattggtagaaaaaaacaaatatctattctctcctgagaagctgtgacaacagggctatcc--------atcatgtgttgtttggcttcaaacttacaaatcgcacagccttgaaccatgaaccatcaaattaa i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4064859 179 - 6311556 ATACTTATTAACCAAGACAGTA---TAAATAAGAAA---TTAGCCTGTAAATACTAGAACAATTGGTAG-AAAAAACAAATATATATTCTCTCCTGAGAAGCTGTGACATCGGAGCTATCC--------ATCATGTGTTGTTTGGCTTCAAACTTACAAATTGCACAGCCTTGAACCATGAACCATCAAATTAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14920461 179 + 15034901 atacttattaaccaacatagta---taaataagaag---tttgcctgtaaatactagaacaattggtag-aaaaaacaaaaatatattctctcctgagaatctgtgacatcagggctatcc--------atcatgtgttgtttggcttcaaacttacaaattgcacagccctgaaccatgaaccatcaaatcaa i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 9695628 172 + 53741614 atattcattaactaacacaaag---taatgaagaggaattttgtctatctgtactggagcagttggtag--gtaaa-aaatatacattctctcctgagaattggtaacatcaggGATATAC--------ATCATGTCTTCTTTGGATTCAAACTTATT-ATTAAATAGTCTTGAGCCATA-------AAATTAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1761033 174 + 5974691 atacacattaaccaatacaggaagtggatgttaaag---tttgcttttcaatactgaaacaactgggat-gaaaaaaacaaatgtggtctcccatgagaatttgtagcat-agggctatac---------tcccgtggtattgggttccaatcttacaAATTATACAGCCT------ACAAGCCATCCAATTAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26327681 169 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 943492 866 - 3201129 I a score=270916.000000 s hg38.chr9_KI270719v1_random 47580 22 + 176845 caaattaacatatagattattt s panTro5.chr4 135072399 22 + 194502333 caaattaacatatagattattt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52768 22 - 70559 caaattaacatatagattattt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90466407 22 - 115148730 caaattaacatatagattattt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131408565 22 + 190429646 cAAATTAACATATAGATTATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130927572 22 + 189454096 CAAATTAACATATAGATTATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34919243 22 - 40319822 cAAATTAACATATAGATTATTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472962 22 - 9219162 CAAATTAACATATAGATTATTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78998157 22 + 135778131 CAAATTAACATATAGATTATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767915 22 - 3013352 cAAATTAACATATAGATTATTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996284 22 + 8656713 cAAATTAACATATAGATTATTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425906 22 - 190850796 caaattaacatatagATTATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6510242 22 - 25294431 caaattaacatatagattattt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4065038 22 - 6311556 CAAATTAACATATAGATTATTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14920640 22 + 15034901 caaattaacatatagattattt i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26327850 22 - 93316391 CAAATTAACATGTAAATTATTT i micMur3.chr14 I 169 C 0 s canFam3.chr19 9695800 21 + 53741614 -AAATTAATGGATCCATAATTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1761207 22 + 5974691 CAAATTACCCTGTGAATcattt i dasNov3.JH569232 C 0 I 3712 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 943492 866 - 3201129 I a score=688078.000000 s hg38.chr9_KI270719v1_random 47602 76 + 176845 -tctggccattgatacactggaagtttggtggaagagatgcaaaatcattccagagCAAAAGCTG-A---AAATTTTTTTC s panTro5.chr4 135072421 75 + 194502333 --ctggccattgttacactggaagtttggtggaagagatgcaaaatcattccagagCAAAAGCTG-A---AAATTtttttc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52790 76 - 70559 -tctggccattgatacactggaagtttggtggaagagatgcaaaatcattccagagCAAAAGCTG-A---AAATTtttttc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90466429 76 - 115148730 -tctggccattgatacactggaagtttggtgaaagagatgcaaaatcattccagagCAAAAGCTG-A---AAATTTTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131408587 76 + 190429646 -TCTGTCCATTGATACACCGGAAGTTTGGGGCAAGAGGTGCAAAATCATTCCAGAGCAAAAGCTG-A---AAATTtttttc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130927594 76 + 189454096 -TCTGTCCATTGATACACCGGAAGTTTGGGGCAAGAGGTGCAAAATCATTCCAGAGCAAAAGCTG-A---AAATTtttttc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34919265 76 - 40319822 -TCTGTCCATTGATACACCGGAAGTTTGGGGCAAGAGGTGCAAAATCATTCCAGAGCAAAAGCTG-A---AAATTtttttc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4472984 76 - 9219162 -TCTGTCCATTGATACACCAGAAGTTTGGGGCAAGAGGTGCAAAATCATTCCAGAGCAAAAGCTG-A---AAATTtttttc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78998179 76 + 135778131 -TCTGTCCATTGATACACCGGAAGTTTGGGGCAAGAGGTGCAAAATCATTCGAGAGCAAAAGCTG-A---AAATTtttttc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2767937 76 - 3013352 -TCTGTCCATTGATACACCAGAAGTTTGGGGCAAGAGGTGCAAAATCATTCCAGAGCAAAAGCTG-A---AAATTtttttc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996306 76 + 8656713 -TCTGTCCATTGATACACTGGAAGTTTGGGGCAAGAGATGCAAAATCATTCAAGAGCAAAAGCTG-A---aaacttttttc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129425928 78 - 190850796 TTCTGGCCATTGATACACTTGAAGTTTGGCAGAAGAGATGCAGAATCATTCCAGAGCAAGAGCTA-A--TTTTTTtttttc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6510264 78 - 25294431 ttctggccattgatacacttgaagtttggcagaagagatgcagaatcattccagagCAAGAGCTG-A--ATTTTTtttttc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4065060 79 - 6311556 TTCTGGCCATTGATACACTTGAAGTTTGGCAGAAGAGATGCAGAATCATTCCAGAGCAAGAGCTGAA--TTTTTTtttttc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14920662 80 + 15034901 ttctgaccattgatacacttgaagtttggcagaagagatgaagaatcattcgagagCAAGAGCTG-AATTTTTTTtttttc i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26327872 74 - 93316391 -TATGGCCATTTATACACAGAGCATTTGGCAGAGGAGATACAAAATAATTCTAGA--AAAAgttg-g---aaaactttttc i micMur3.chr14 C 0 C 0 s canFam3.chr19 9695821 74 + 53741614 -TCTGGCCATTGATACACTGGGGGTTT--CAGAGGAAGTACAAAGTTATTCTACAACAGTAGTTG-G---AAActtccttc i canFam3.chr19 C 0 n 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 943492 866 - 3201129 I a score=2867356.000000 s hg38.chr9_KI270719v1_random 47678 317 + 176845 TGCAAAGGGCAAGATAATAAACATCTTACACATTATTGACCATTttaaagagcagcttatagtcaccaaaaggaat-atcaacaaactagcaagtgaagataaagaattatccagattgcagaatatgaaccaaaagatagaacataagataagctgaaagacatggaggattgaataaaactatccaaggaatatct--aaaagaaattctgaaa--agagaatagtaggaataaaaataatgggATTATAATAGTTTGcttctacttctgggatgaatgtagtagttgtataagacacatactcttattaaaatgacaag s panTro5.chr4 135072496 314 + 194502333 tgcaaagggcaaaataataaacatcttaggcattattgaccaTTttaaagagcagcttatagtcaccaaaaggaat-atcaacaaactagaaaatgaagatgaagaattatccagaatgcagaatatgaaccaaaagatagaacataagataagctgaaagacatggacgattgaataaaactatccaaggaatatct--aaaagaaattctgaaa--agagaatagtaagaatAAAAATAATGGGATTATAATAGTTTGcttctacttctgggatgaatgtagtagttgtataagac---tactgttattaaaatgacaag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 52866 310 - 70559 tgcaaagggcaagataataaacatcttaggcattattgaccaTTttaaagagcagcttatagtcaccaaaaggaat-atcaacaaactagaaagtgaagatgaagaattatccagaatgcagaatatgaaccaaaagatagaacataagataagctgaaagacatggaggattgaataaaactatccaaggaatatct--aaaagaaattctgaaa--agagaatagta-gaataaaaataatgggATTATAATAG-TTGcttctacttct-ggatgaatgtagtagttgtataagac---tact-ttattaaaatgacaag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90466505 317 - 115148730 TGCAAAGGGCAAGATAATAAACATCTTAGGCATTATTGACCATTttaaagagcagcttatagtcaccaaaagggct-atcaacaaactagaaagtgaagatgaagaattatccagaatgcagaatatgaaccaaaagatagaacataagataagctgaaagacatggaggattgaaaaaaactatccaaggaatatct--aaaagaaattctaaaa--agagaatagtaggaataaaaataatgggATTATAATAGTTTGcttctacttctgggatgaatggagtagctgtataagacacatattcttattaaaatgacaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131408663 317 + 190429646 tgcaaagggcaagataataaacatcttaggcattgtggaccaTTttaaagagcagcttatagtcaccaaaagggat-ttcaacaagctagaacgtgaagatgaagaataatcctgaatgcagaatatgaacaaaaagatagagcataggataagctgaaagacatggaggattgaataaaactatccaagaaatatct--aaaagaaattctagaa--agagaatagtaagaatAAAAATAATGGGATTATAATAATTTGcttctacttctgggatgaatggtgtagttgtgtaacacacatactcttattaaaatgacaag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130927670 317 + 189454096 tgcaaagggcaagataataaacatcttaggcattgtggaccGTTttaaagagcagctgatagtcaccaaaagggat-ttcaacaagctagaatgtgaagatgaagaatcatcctgaatgcagaatatgaacaaaaagatagagcataagataagctgaaagacatggaggattgaataaaactatccaagaaatatct--aaaagaaattctagaa--agagaatagtaagaaGAAAAATAATGGGATTATAATAATTTGcttctacttctgggatgaatggtgtagttgtgtaagacacatactcttattaaaatgacaag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34919341 317 - 40319822 tgcaaagggcaagataataaacatcttaggcattgtggaccaTTttaaagagcagcttatagtcaccaaaagggat-ttcaacaagctagaatgtgaagatgaagaatcatcctgaatgcagaatatgaacaaaaagatagagcataagataagctgaaagacatggaggattgaataaaactatccaagaaatatct--aaaagaaattctagaa--aaagaatagtaagaatAAAAATAATGGGATTATAATAATTTGAttctacttctgggatgaatcgtgtagttgtgtaagacacatactcttattaaaatgacaag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4473060 317 - 9219162 tgcaaaaggcaagataataaacatcttaggcattatggaccaTTttaaagagcagcttatagtcaccaaaagggat-ttcaacaaactagaacgtgaagatgaagaattatcctgaatgcagaatatgaacaaaaagatagagcataagataagctgaaagacatggaggatcgaataaaactatccaagaaatagct--aaaagaaattctagaa--agagaatagtaagaatAAAAATAATGGGATTATAATAATTTGcttctacttctgggatgaatggtgtagttgtataagacacatactcttattaaaatgacaag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78998255 314 + 135778131 tgcaaagggcaagataataaacatcttaggcattatggaccatTttaaagagcagcttatagtcaccaaaagggat-ttcaacaagctagaacgtgaagatgaagaattatcctgaatgcagaatatgaacaaaaagatagagcataagataagctgaaagacatggaggattgaataaaactatccaagaaatatct--aaaagaaattctagaa--agagaagagtaagaataaaaataatgggATTATAATAATTTGcttctacttttgggatgaatggtgtagttgtgtaagacacatactcttattaaaatgac--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2768013 317 - 3013352 tgcaaaaggcaagataataaacatcttaggcattatgaaccaTTttaaagagcagcttatagtcaccaaaagggat-ttcaacaaactagaacgtgaagatgaagaattatcctgaatgcagaatatgaacaaaaagatagagcataagataagctgaaagacatggaggattgaataaaactatccaagaaatatct--aaaagaaattctagaa--agagaatagtaagaatAAAAATAATGGGATTATAATAATTTGcttctacttctgggatgaatggtgtagttgtataagacacatactcttattaaaatgacaag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996382 317 + 8656713 tgcaaaggacaagataataaacatcttaggcattatggaccaTTttaaagagcagcttatagtcaccaaaagggat-ttcaacaaactagaacgtgaagatgaagaattatcctgaatgcagaatatgaacaaaaagatagagcataagataagctgaaagacctggaggattgaataaaactgtccaagaaatatct--aaaagaaattctagaa--agagaatagtaagaatAAAAATAATGGGATTATAATAGTTTGcttctacttctgggatgaatggtgtagttgtataagacacatactcttattaaaatgacaag i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129426006 321 - 190850796 tgctaagggctagataataaaaaccttaggccttgtggaccaTTTTAAAGAGCTGCATATAGTCACCAAAAGGGAT-ATCAAAAAATTACAAAGTGACGAtgaagaattacccagaatgtggaatatgaacaaaaagatagaacataagataagctgaaagacatggaggatcaaataaaactattcaaggaatatctaaaaaaaaaattctaaaaagagagaaGAGTGGAAACAAAGATAATGGAATTATAATGGTTTGcttccacttctgggataaatggagtagttgtatacgacaaatactcccattaaaatgacaag i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6510342 319 - 25294431 tgcaaaaggccagataataaaaaccttagaccttgtggaccatTttaaagagcaacatatagtgaccaaaagggat-atcaacaaattagaaagtgaagatgaagaattacccagaatgtggaatatgaacaaaaagatagaacataagataagctgaaagacatggagaatgaaataaaactattcaaggaatatct--aaaagaaattataaaaagagagaagagtggaaaCAAAAATAATGGAATTATAATGGTTTGcttccacttctgggataaacagaatagtggtataagacaaatactcccattaaaatgacagg i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4065139 318 - 6311556 tgcaaagagccagataataaaaaccgtaggtcttgtgcaccatTttaaagagcagcatagagtcaccaaaagggat-atcaacaaattagaaagtgaagatgaagaattacccagaatgtggaatatgaacaaaaagatagaacataagataagctgaaagacatggaggatcaaataaaactattcaaggaatatct--aaaagaaactct-aaatgagagaagagtgaaaaCAAAAATAATGGAATTATAATGGTTTGcttccacttctgggataaatggagtagttgtataagacaaatactcccattaaaatgacaag i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14920742 319 + 15034901 tgcaaagggccagatagtaaaaactttaggctttgtggaccatTttaaagagcagcatatagtcaccaaaagggat-atcaacaaattagaaagtgaagatgaagaattacccagaatgtggaatatgaacaaaaagatagaacataagataagctgaaggacatggaggatcaaataaaactatccaaggaatatct--acaagaaattctaagaagagagaagagTGGAAACAAATATAATGGAATTATAATGGTTTGcttccacttctggggtaaatggagtagttatataagacagatactcccattaaaatgacaag i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26327946 316 - 93316391 tgtaaagggctagataataaatattttaggctttattggccatTttaaagagcagtttatagccagctaaagggacaatcaagaaactagaaattaaagatggggaattattcaaaatgcagaatatgaacaaagagatagactacgtgagaagttgaaagacatggaggatagaataaaatgatccaaggaatatct--aaaaggaattctaaaaagagagaatag----aATAAAATCAGTGAATTGATAAGGGTTTGcttctacttctgggatggatgaagtagttgtataagacccatgttcccattgtaatgacaag i micMur3.chr14 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e otoGar3.GL873702 943492 866 - 3201129 I a score=207089.000000 s hg38.chr9_KI270719v1_random 47995 23 + 176845 aaaaagctggataaattataaaa s panTro5.chr4 135072810 23 + 194502333 aaaaagctggataaattataaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 53176 23 - 70559 aaaaagctggataaattataaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90466822 23 - 115148730 gaaaagtgggataaattattaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131408980 23 + 190429646 aaaaagctggataaattataaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130927987 23 + 189454096 aaaaagctggataaattataaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34919658 23 - 40319822 aaaaagctggataaattataaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4473377 23 - 9219162 aaaaagctggataaattataaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78998569 23 + 135778131 aaaaagctggataaattataaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2768330 23 - 3013352 aaaaagctggataaattataaaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996699 23 + 8656713 aaaaagctggataaattataaaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129426327 22 - 190850796 aaaaaactggatcaatcataaa- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6510661 23 - 25294431 aaaaaactggatcaatcataaac i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4065457 23 - 6311556 aaaaaactggatcgatcataaaa i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14921061 23 + 15034901 ggaaaactggatcaatcataaaa i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26328262 23 - 93316391 agaaagctggataagttttaaaa i micMur3.chr14 C 0 I 562 s otoGar3.GL873702 944358 23 - 3201129 aaagtgctggattccaggtgaaa i otoGar3.GL873702 I 866 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I a score=1532558.000000 s hg38.chr9_KI270719v1_random 48018 181 + 176845 --gccaca--tatctttt---aaagcatgagggaactgtagaagcaatgatgaatagatgaactaagagtacagaCATACCTGAGTGT-TCGAAATGGGCCAAAGAGCATGATG-CATTCATAGCATCTACTAGTCAATTCTGGCACAAATTAGGAAGTA------GAAGGCATGTTCAATGGAGGCAAAACAGTA s panTro5.chr4 135072833 182 + 194502333 --gccaca--tatttttt--taaagcatgagggaactgtagaagcaatgatgaatagatgaactaagagtacagaCACACCTGAGTGT-TCCAAATGGGCGAAAGAGCATGATG-TATTCATAGCATCTACTAGTCAATTCTGGCACAAATTAGGAAGTA------GAAGGCATGTTCAATGGAGGCAAAACAGTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 53199 178 - 70559 --gccaca--tatttttt---aaagcatgagggaactgtagaagcaatgatgaatagatgaactaagagtacagaCATACCTGAGTGT-TCGAAATGGGCCAAAGAGCATGATG---TTCATAGCGTCTACTAGTCAATTCTGGCACAAATTAGGAAGTA------GAA-GCATGTTCAATGGAGGCAAAACAGTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90466845 180 - 115148730 --gccaca--tatttttt---aaagcatgagggaactgtagaagcaatgatgaatagatgaactaagagtacagaCATACCTGAGTGT-TTGAAATGGGCCAAAGAGCATGATG-TATTCATAGTGTCTACTAGTCAATTCTGGCACAAATTAGGAAATA------GAA-GCATGTTCCGTGGAGGCAAAACAGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131409003 181 + 190429646 --gtcaca--tatttttt---aaagcatgagggaactgtggaagcaatggtgaacagaggaactaaaagcacagaCATACCTGAGTGT-TCAAAATGGGTCAAAGAGCATGATG-TTTTCACAGGGTCTACTAGTCAATTCTGGTACAAATTAGGAAGTA------GAAGGCATATTCAATGGAGGCAAAACAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130928010 181 + 189454096 --gtcaca--tatttttt---aaagcatgagggaactgtggaagcaatggtgaacagaggaactaaaagcacagaCATACCTGAGTGT-TCAAAATGGGTCAAAGAGCATGATG-TTTTCACAGGGTCTACTAGTCAATTCTGGTACAAATTAGGAAGTA------GAAGGCATATTCAATGGAGGCAAAACAGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34919681 181 - 40319822 --gtcaca--tatttttt---aaagcatgagggaactgtggaagcaatggtgaacagaggaactaaaagcacagaCATACCTGAGTGT-TCAAAATGGGTCAAAGAGCATGATG-TTTTCACAGGGTCTACTAGTCAATTCTGGTACAAATTAGGAAGTA------GAAGGCATATTCAATGGAGGCAAAACAGTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4473400 181 - 9219162 --gtcaca--tatttttt---aaagcatgagggaactgtagaagcaatgatgaacagaggaactaaaagcacagaCATACCTGAGTGT-TCAAAATGGGTCAAAGAGCATGATG-TTTTCACAGGGTCTACTAGTCAATTCTGGTACAAATTAGGAAGTA------GAAGGCATATGCAATGGAGGCAAAACAGTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78998592 181 + 135778131 --gtcaca--tatttttt---aaagcatgagggaactgtagaagcaatgacgaacagaggaactaaaagcacagaCATACCTGAGTGT-TCAAAATGGGTCAAAGAGCATGATG-TTTTCACAGTGTCTACTAGTCAATTCTGGTACAAATTAGGAAGTA------GAAGGCATATTCAATGGAGGCAAAACAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2768353 181 - 3013352 --gtcaca--tatttttt---aaagcatgagggaactgtaaaagcaatgatgaacagaggaactaaaagcacagaCATACCTGAGTGT-TCAAAATGGGTCAAAGAGCATGATG-TTTTCACAGGGTCTACTAGTCAATTCTGGTACAAATTAGGAAGTA------GAAGGCATATGCAATGGAGGCAAAACAGTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996722 181 + 8656713 --gtcaca--tatttgtt---aaagcatgagggaactgtagaagcaacgatgaacagaggaactaaaagtacagaCATACCTGAGTGT-TCGAAATGGGTCAAAGAGCATGATG-TTTTCACAGGGTCTGCTAGTCAATTCTGGCACAAATTAAGAAGTA------GAAGGCATATTCAATGGAGGCAAAACAGTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129426349 181 - 190850796 --atctca--catttttt---aaagcatgagaagactgtagaagcaatgataaatagatgaactaagagtacagaCATACCTGAGTGT-TTGAAATAAGCCAAAAACCATGATT-TTTGTATAAGGTCTACTAGTCGATTCTGGCACAAATTAGGAAGTA------GAAGTCATGACCAATGGAGGCAAATCAGTA i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6510684 181 - 25294431 --atctca--tatttttt---aaagcatgagaagactgtagaagcaatgataaatagatgaactaagagtacagaCATACCTGAGTGT-TCAAAATTAGCCAAAAACCAGGATT-TTTGCATGAAGTCTACTAGTCGATTCTGGCGCAAATTCGGAAGTA------GAAGTCATGATCAATGGAGGCAAATCAGTA i saiBol1.JH378129 C 0 I 127 s cebCap1.NW_016107420v1 4065480 181 - 6311556 --gtctca--tatttttt---aaagcatgagaagactgtagaagcaatgataaatagatgaactaagagtacagaCATACCTGAGTGT-TTGAAATGAGCCAAAAAACATGATT-TTTGCATAAAGTCTACTAGTCGATTCCGGCGCAAATTAGGAAGTA------GAAGTCATGATCAATAGAGGCAAATCAGTA i cebCap1.NW_016107420v1 C 0 I 2 s aotNan1.NW_018507635v1 14921084 181 + 15034901 --gtctca--tatttttt---aaagcatgagaagactgtagaagcaatgataaatagatgaactaagagtacagaCATACCTGAGTGT-TTGAAATTATCCAAAAACCATGATT-TTTGCATAAAGTCTACTAGTTGATTCCGGTGCAAATAAGGAAGTA------GAAGTCATGATCAATGGAGACAAATCAGTA i aotNan1.NW_018507635v1 C 0 I 2 s otoGar3.GL873702 944381 185 - 3201129 gcaccAAAATCATTTTTTAAAAAAGCATAAGAGAACTATGAAGAT--------ACAAGTGAACTAAGAAAGCAAACAGACCTGTGTTTACTGAGATGAACCAAATAGCGTGATTTTTTTCACAGAGCCATCT-GCCAATTATGACATAAATTAGGAAGAAGCCTCCGAAGGCATGTTCAGTGCAGGCAAAATAC-- i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26328285 562 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I a score=152299.000000 s hg38.chr9_KI270719v1_random 48199 19 + 176845 --ATATATATAtaaacatgtg s panTro5.chr4 135073015 17 + 194502333 --ATATATAta--aacatgtg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 53377 17 - 70559 --ATATATAta--aacatgtg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90467025 17 - 115148730 --ATatttata--aacatgtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131409184 17 + 190429646 --ATATATATA--AACATGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130928191 17 + 189454096 --ATATATATA--AACATGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34919862 17 - 40319822 --ATATATATA--AACATGTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4473581 17 - 9219162 --ATATATATA--AACATGTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78998773 17 + 135778131 --ATATATATA--AACATGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2768534 17 - 3013352 --ATATATATA--AACATGTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996903 17 + 8656713 --ATATATAta--aacatgtg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129426532 15 - 190850796 --ATATATACA--AAC--GTG i calJac3.chr3 I 2 C 0 s saiBol1.JH378129 6510992 17 - 25294431 --GTATATAta--aacatgtg i saiBol1.JH378129 I 127 C 0 s cebCap1.NW_016107420v1 4065663 17 - 6311556 --ATATATAta--aacatatg i cebCap1.NW_016107420v1 I 2 C 0 s aotNan1.NW_018507635v1 14921267 17 + 15034901 --ACATACAta--aacatgtg i aotNan1.NW_018507635v1 I 2 C 0 s otoGar3.GL873702 944566 19 - 3201129 AAATACATATG--AACTTGTG i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26328285 562 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I a score=725691.000000 s hg38.chr9_KI270719v1_random 48218 70 + 176845 ggtaagtctaaagaagcatttgctatatTGAATCAAACAAATACAATAAAGTAAAACAAATACTAG-AGAA s panTro5.chr4 135073032 70 + 194502333 ggtaagtctaaagaagcatttgctatatTGAATCAAACAAATACAACAAAGTAAAACAAATACTAG-AGAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 53394 70 - 70559 ggtaagtctaaagaagcatttgctatatTGAATCAAACAAATACAATAAAGTAAAACAAATACTAG-AGAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90467042 70 - 115148730 ggtaagtctaaagaagcatctgctatatTGAATCAAACAAATACAATAAAGTAAAACAAATACTAG-AGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131409201 70 + 190429646 GGTAAGTTTAAAGAAGCATTTGCTATATTGAATCAAACAAACACAATACAGTAAAACAAATACTAG-AGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130928208 70 + 189454096 GGTAAGTTTAAAGAAGCATTTGCTATATTGAATCAAACAAACACAATACAGTAAAACAAATACTAG-AGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34919879 70 - 40319822 GGTAAGTTTAAAGAAGCATTTGCTATATTGAATCAAACAAACACAATACAGTAAAACAAATACTAG-AGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4473598 70 - 9219162 GGTAAGTTTAAAGAAGCATTTGCTATATTGAATCAAACAAACACAATACAGTAAAACAAATACTAG-AGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78998790 70 + 135778131 GGTAAGTTTAAAGAAGCATTTGCTATATTGAATCAAACAAACACAATACAGTAAAACAAATACTAG-AGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2768551 70 - 3013352 GGTAAGTTTAAAGAAGCATTTGCTATATTGAATCAAACAAACACAATACAGTAAAACAAATACTAG-AGAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996920 70 + 8656713 ggtaagtctaaagaagcatttgctatatTGAATCAAACAAATACGATACAGTAAAACAAATACTAG-AGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129426547 69 - 190850796 GGTAAGTCTAAAGAAGCATTTGCTATATTGAAGCAAACAAATACAATAAAATAAAAC--ATGTTAGAAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6511009 71 - 25294431 ggtaaatctaaagaagcatttgctatatTGAAGCAAACAAATATAATACAATAAAACAAATATTAGAAAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4065680 71 - 6311556 ggtaaatctaaagaagtatttgctatattaaagcaaACAAATACAATAAAGTAAAGCAAATATTAGAAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14921284 71 + 15034901 ggtaaatctaaagaagcatttgctatatggaaGCAAATAAATACAATAAAGTAAAACAAATATTAGAAAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26328847 70 - 93316391 GGTAATTCTAAAGAAGCATTTGTTGTATAGAAGCAAATAAAAATAATAAAGTAAAACAAATGCTAG-AGAA i micMur3.chr14 I 562 I 1252 s otoGar3.GL873702 944585 70 - 3201129 GGTAAGTCTAAAGAAGCATTTGCAGTATTGCATTAAACAAAAGTTACAAAGTAAAACAAATACTAG-AAAA i otoGar3.GL873702 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I a score=4084654.000000 s hg38.chr9_KI270719v1_random 48288 475 + 176845 CATtgttaaactgagttaa--gtttggctcaaagtgcccattgtacttgcctaattaggtttggcccaaagtggcatccatacatagtg-actgtactctaacttaacgtgtaaataagttgtaagctaat--gtagatgtatggacttgtaaccaagcaactgagactcaaccaatcataggagccaaacccttagtcaatcccaaactgaatgctgccaaattatgcccaaataaggcaaatattgaactgcaccaatcagggaaactctgaatataattttctatgttctggttataaatacatctcaccactctggatgtggagtcactctgaacaatcttc-gttctgggatggtgcctagttctcaaacctttttcttggtcaaataaacttagtgaaatttaacatgtcttagttgta-tttt------------tttaaacaACATTCAAAGACCTACAAAATAGGACAGGGAACTTG----TATTTAGA s panTro5.chr4 135073102 475 + 194502333 CATtgttaagctgagttaa--gtttggctcaaagtgcccattgtacttgcctaattaaatttggcccaaagcggcatccatacatagtg-actgtactctaacttaatgtgtaaataagttgtaagctaat--gtagatgtatagacttgtaaccaagcaactgagcctcaaccaatcataggagccaaacccttactcaatcccaggctgaatgctgccaaattatgcccaaataaggcaaatattgaactgcaccaatcagggaaactctgaatataattttctatgttctggttataaatacatctcaccactctggatgtggagtcactctgaacaatcttt-gttctgggatggtgcctagttctcaaacctttttcttggtcaaataaacttagtgaaatttaacatgtcttagttgta-tttt------------tttaaacaACATTCAAAGACCTACAAAATAGGACAGGGAACTTG----TATTTAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 53464 474 - 70559 CATTGTTAAGCTGAGTTAA--GTTTGGCTCAAAGTGCCCATTGTACTTGCCTaattaagtttggcccaaagcggcatccatacatagtg-actgtactctaacttaatgtgtaaataagttgtaagctaat--gtagatgtatggacttgtaaccaagcaactgagcctcaaccaatcataggagccaaacccttagtcaatcccaggctgaatgctgccaaattatgcccaaataaggcaaatattgaactgcaccaatca-ggaaactctgaatataattttctatgttctggttataaatacatctcaccactctggatgtggagtcactctgaacaatcttt-gttctgggatggtgcctagttctcaaacctttttcttggtcaaataaacttagtgaaatttaacatgtcttagttgta-tttt------------tttaaacaACATTCAAAGACCTACAAAATAGGACAGGGAACTTG----TATTTAGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90467112 479 - 115148730 CATtgttaagctgagttaa--gtttggctcaaagtgtccgttgtacttgcataatgaagtttggcccaaagtggcatccatacatagtg-gctgtactctaacttgatgtgtaaataagttgtaagctaat--gtagatgtatagccttgtaaccaagcaactgagcctcaaccaatcatagcagccaaacccttagtcaatcccagggtgaatgctgccaaattatgcccaaataaggcaaatattgaactacaccaatcagggaaactctgaatataattttctatgttctggttataaatacatctcaccactctggaagtggagtcactctgaacaatcttt-gttctgggatggtgcctaatgctcaaacctttttcttggtcaaataaacttagttaaatttaacatgtcttagttgta-tttt------------tttaaacaACATTCAAAGACCTACAAAATAGGACAGGGAACTTGTATTTATTTAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131409271 471 + 190429646 CATTGTTAAGCTGAGCTAA--GTTTGGCTCAGAGTGTCCATTTTACTAGCATaatgaagtttggcccaaagtggcatccatacatagtg-actgtaccctaacttgatgtgtaaacaagttgtaagctaac--atagatgtgtagccttgtaaccaagcaactgagcctcaaccaatcatagcaaccaaacccttagtcaattccaggctgaatgctgccaaattatacccaaataaggcaaatattgaattgtaccaatcagggaaac----aatataattttctatgttctggttataaatacatctcacccctctggaagtggactcacactgaacaatcttt-gttctgggatggtgcctatttctcaaaactttttcttggtcaaataaacttagttaaatttaacatatcttagttgta-tttt------------tttaaacaACATTCAAATACCTACAAAATAGGACAGAGAACTTG----TATTTAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130928278 471 + 189454096 CATTGTTAAGCTGAGCTAA--GTTTGGCTCAGAGTGTCCATTTTACTAGCATaatgaagtttggcccaaagtggcatccatacatagtg-actgtaccctaacttgatgtgtaaacaagttgtaagctaac--atagatgtgtagccttgtaaccaagcaactgagcctcaaccaatcatagcaaccaaacccttagtcaattccaggctgaatgctgccaaattatacccaaataaggcaaatattgaattgtaccaatcagggaaac----aatataattttctatgttctggttataaatacatctcacccctctggaagtggactcacactgaacaatcttt-gttctgggatggtgcctatttctcaaaactttttcttggtcaaataaacttagttaaatttaacatatcttagttgta-tttt------------tttaaacaACATTCAAATACCTACAAAATAGGACAGAGAACTTG----TATTTAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34919949 471 - 40319822 CATTGTTAAGCTGAGCTAA--GTTTGGCTCAGAGTGTCCATTTTACTAGCATaatgaagtttggcccaaagtggcatccatacatagtg-actgtaccctaacttgatgtgtaaacaagttgtaagctaac--atagatgtgtagccttgtaaccaagcaactgagcctcaaccaatcatagcaaccaaacccttagtcaattccaggctgaatgctgccaaattatacccaaataaggcaaatattgaattgtaccaatcagggaaac----aatataattttctatgttctggttataaatacatctcacccctctggaagtggactcacactgaacaatcttt-gttctgggatggtgcctatttctcaaaactttttcttggtcaaataaacttagttaaatttaacatatcttagttgta-tttt------------tttaaacaACATTCAAATACCTACAAAATAGGACAGAGAACTTG----TATTTAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4473668 473 - 9219162 CATtgttaagctgagctaa--gtttggctcagagtgtccattttactagcataatgaagtttggcccaaagtggcatccatacatagtg-actgtaccctaacttgatgtgtaaacaagttgtaagctaac--atagatgtgtagccttgtaaccaagcaactgagcctcaaccaatcatagcaaccaaacccttagtcaattccaggctgaatgctgccaaattatacccaaataaggcaaatattgaattgtaccaatcagggaaac--ttaatataattttctatgttctggttataaatacatctcacccctctggaagtggactcacactgaacaatcttt-gttctgggatggtgcctatttctcaaaactttttcttggtcaaataaacttagttaaatttaacatatcttagttgta-tttt------------tttaaacaACATTCAAATACCTACAAAATAGGGCAGGGAACTTG----TATTTAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78998860 472 + 135778131 CATTGTTAAGCTGAGCTAA--GTTTGGCTCAGAGTGTCCATTTTACTTGCATaatgaagtttggcccaaagtggcatccatacatagtg-actgtaccctaatttgatgtgtaaacaagttgtaagctaac--atagatgtatagtcttgtaaccaagcaactgagcctcaaccaatcatagcaaccaaacccttagtcaattccaggctgaatgctgccaaattatacccaaataaggcaaatattgaattgtaccaatcagggaaac--tgaatataattttctgtgttctggttataaatacatctcacccctctggaagtggagtcacgctgaacaatcttt-gttctgggatggtgcctatttctcaaaactttttcttggtcaaataaacttagttaaatttaacatgtcttagttgta--ttt------------tttaaACAACATTCAAATACCTACAAAATAGGACAGGGAACTTG----TATTTAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2768621 473 - 3013352 CATTGTTAAGCTGAGCtaa--gtttggctcagagtgtccattttactagcataatgaagtttggcccaaagtggcatccatacatagtg-actgtaccctaacttgatgtgtcaacaagttgtaagctaac--atagatgtgtagccttgtaaccaagcaactgagcctcaaccaatcatagcaaccaaacccttagtcaattccaggctgaatgctgccaaattacacccaaataaggcaaatattgaattgtaccaatcagggaaac--ttaatataattttctatgttctggttataaatacatctcacccctctggaagtggactcacactgaacaatcttt-gttctgggatggtgcctatttctcaaaactttttcttggtcaaataaacttagttaaatttaacatatcttagttgta-tttt------------tttaaacaACATTCAAATACCTACAAAATAGGGCAGGGAACTTG----TATTTAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5996990 474 + 8656713 CATtgttaagctgagctaa--gtttggctcagagtgtccattttacctgcataatgaagtttggcccaaagtggcatccatacgtagtg-actgtaccctaacttgatgtgtaaacaagttgtaagctaac--atagatgtatagccttgtaaccaagcaactgagcctcaaccaatcatagcaaccaaatctttagtcaattccaggctgaatgctgccaaattatacccaaataaggcaaatattgaattgtaccaatcagggaaac--tgaatataattttctgcattctgattataaatacatctcacccctatggaagtggagtcacgctgaacaatcttt-gttctgagatggtgcctatttctcaaaactttttcttggtcgaataaacttagttaaatttaacatgtcttagttgtattttt------------tttaaACAACATTCAAATACCTACAAAATAGGACAGGGAACTTG----TATTTAGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129426616 472 - 190850796 CATtgttaagttgagttaa--gtttggctcaaagtgtcctttgtacttgcataat--tgtttcacccaaagtggcatccatacttagtg-gctgtaccttagcttgatgtataaacaagttgtaagctaac--atagatgtatagccttgtatccaaacaactgagcctcaatcaatcacagcagccaaacccttagtcaattccaggctg-atggtgccaaactatgcccaaataaggcaaatactgaactgcaccgatcggggaaactctgaatataattttctatgttctggttaacaatacatctcttcactctgaaagtggagtcactctgaccaatctct-gttctaggatagtgtatagttctcaaacctttttctaggtcaaataaacttagttaaatgtaacatgtctTAGTTGTA-TTTT------------CTTAAATGACATTCAAAAACCTATAAAATAGGACAAGGTATTTG----TATTTAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6511080 459 - 25294431 CATt-----gttgagttaa--ctttaactc--agtgttctttgtacttgcataat--agtttcacccaaagtggcatccatgcttagtg-gctgtaccctagcttgatgtataaacaagttgtaagcttac--atag----atagccttgtatccaaacaactgagcctcagtcaatcatagcagccaaatccttagtcaattccaggctg-atggtgccaaactatgcccaaataaggtaaatactgaactgcatcaatcggggaaactcttaacataattttctatgttctggttaaaagtacatctctccactctgaaagtggagtcactctgaccaatcttt-gttctaggatggtgtatagttctcaaacctttttctaggtcaaataaacttagttaaatttaaC--GTCTTAGCTGTA-TTTA------------TTTAAATGACATTCAAAAACCTACAAAATAGGACAAAGTATTTG----TATTTAGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4065751 465 - 6311556 CATT----------GTTAA--GTTTGGCTCAATGTGTTCTTTGTACTTGCATAAT--agtttcacccaaagtggcatccatacttagtg-gctgtaccctagcttgatgtataaacaagttgtaagctaacatatagatgtatagccttgtatccaaacaactgagcctcaatcaatcatagcagccaaacccttagtcgattccagaccg-atggtgccaaactatgcccaaataaggcaaatactgaactgcaccaatcgaggaaactctgaatataattttctatgttctggttaaaaatacatctctccactctgaaagtggagtcattctgaccaatctttggttctaggatggtgtatagttctcaaacctttttctaggtcaaataaacttagttaaatttaacatgtcttagttgta-tttt------------ttttaaTGACATTCAAAAACCTACAAAATAGTACAATGTATTTG----TATTTAGA i cebCap1.NW_016107420v1 C 0 I 7 s aotNan1.NW_018507635v1 14921355 467 + 15034901 CATt-----gttgagttaa--gtttggctcaaagtgttctttgtacttgcataat--agttccacccaaagtggcatccatacttagtg-gctgtaccctagcttgatgtataaacaggttgtaagctaac--acagatgtacagccttgtatccaaacaactgagcctcaatcaatcatagcagccaaacccttagtcagttccaggctg-atggcgccaaactatgcccaaataaggcaaatactgaactgcaccaatcggggaaactctgaatacaattttctatgttctggttaaaaatacatctctccactctgaaagtggagtcactctgaccaatcttt-gttctaggatggtgtatacttctcaaacctttctctaggtcagataaacttagttaaatttaacatgtctTAGTTGTA-TTTT------------TTCAAATGGCATTAAAAAACCTACAAAATAGGACAAGGTATTTG----TATTTAGA i aotNan1.NW_018507635v1 C 0 I 7 s otoGar3.GL873702 944655 484 - 3201129 AAACACTacactgagttaaacactgagttaaaagcagcctttgtacttgtgtaa---aatttggctaaaagtagcctccttacatagtgaattatgccttagtttgatgtgtaaataattcataatc--at--ttataagttgaaattcctactaaagctactgagtcttag-aaattatagcagccaaaccctcagccaatcccaagaggagagttgttgaattgtgccaaaataaggcaaacccttagctgcaccaatcaggtcatctctgcatgttatttcctattttctggtcataaatatagttttccacattggaggtgggggcatttggaaccaccttc-catctggaatgctgctggggtctacaatcttcctcttgcttaaacaaacgttgtcaagtttTACATTTCTTCGGTTTA-TTTTTGCTTCTTTTCATTTTTATAACACTAAAAGACTAGCACAGTGGTACCAGGAATCAG----TACTTAGT i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I a score=104557.000000 s hg38.chr9_KI270719v1_random 48763 31 + 176845 CTATACTGTCTAAATGCAACTTATTTATGCT s panTro5.chr4 135073577 31 + 194502333 CTATACTGTCTAAATGCAAGTTATTTATGCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 53938 31 - 70559 CTATACTGTCTAAATGCAACTTATTTATGCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90467591 31 - 115148730 CTACACTGTCTAAATGCAAGTTATTTATGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131409742 31 + 190429646 CTAAACTGTCTAAAAGCAAGTTACTTATGCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130928749 31 + 189454096 CTAAACTGTCTAAAAGCAAGTTACTTATGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34920420 31 - 40319822 CTAAACTGTCTAAAAGCAAGTTACTTATGCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4474141 31 - 9219162 CTAAACTGTCTAAATACAAGTTACTTATGCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78999332 31 + 135778131 CTAAACTGTCTAAATGCAAGTTACTTATGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2769094 31 - 3013352 CTAAACTGTCTAAATGCAAGTTACTTATGCT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5997464 31 + 8656713 CTAAATTGTCTAAATGCAAGTTACTTATGCT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129427088 7 - 190850796 -----TAGTATA------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6511539 7 - 25294431 -----TAGTATA------------------- i saiBol1.JH378129 C 0 C 0 s otoGar3.GL873702 945139 16 - 3201129 -----------CATTATAAACTA-TTAT--- i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e aotNan1.NW_018507635v1 14921822 7 + 15034901 I e cebCap1.NW_016107420v1 4066216 7 - 6311556 I a score=4416517.000000 s hg38.chr9_KI270719v1_random 48794 523 + 176845 AGTTATTTGTGTGTTATAGAGAATATAGTGATATTGATATACTTTAAGTCAT---TTATGTACATCGGGAAGAGGAAAAAA-AA-----AAAGTTACCCAATTCAATGGAAGTCAAATGAAGAAGCAGAATAGAGCTACCAG-AAAAACATGATAAGAGTTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTGG--------GGAACTTCTC------------------------CTTGCAAGCCAAGTTAA--------CTTTTGTTCAGATAGAATTCTCAGAT-GAAAA-----------------------------------------------AAGACAGAAATTATAGTCTATGGCTGACAAAATATAGAGAGTCTGCCCAGAGACTTTTGCTATTCTAAGCTAGAATCTTAAGGTTAATACACTTCAATGAAG----GAGAAAACAAGA---ACCAACTCTTGAGCATACTTGAAGTCTGGGACCAAATCTGAGTTGTTCAGA---TACTCATATTTTCACCCTGATTTAAGATGATCTGATATGGGTAATGCTTGCATAATCAAAACTTCTGGAGGAACTTATCTCCATAGTAGACAACAAGGTAATCTT s panTro5.chr4 135073608 520 + 194502333 AGTTATTTGTGTGTTATAGAGAATATAGTGATATTGATATACTTTAAGTCGT---TTATATACATCGGGAAGAGGGAAAAA-AA-----A--GTTACCCAATTCAATGCAAGTCAAACAAAAAAGCAGAACAGAGCTAACAG-AAAAACATGATAAGAGTTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTAG--------GGAACTTTTC------------------------CTTGCAAGCCAACTTAA--------CTTTTGTTCAGATAGAATTCTCAGAT-GAAAA-----------------------------------------------A-GACAGAAATTATAGTCTATGGCTGACGAAATATAGAGAGTCTGCCCAGAGACTTTTGCTATTCTAAGCTAGAATCATAAGGTTAATATACTCCAATGAAG----GAGAAAACAAGA---ACCAGCTCTTGAGCATACTTGAAGTCTGGGACCAAATCTGAGTTGTTCAGA---TACTCATATTTTCACCCTGATTTAAGATGATCTGATATGGGTAATGCTTGCATAAGCAAAACTTCTGGAGGAACTTATCTCCATAGTAGACAACAAGGTAATCTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 53969 517 - 70559 AGTTATTTGTGTGTTATAGAGAATATAGTGATATTGATATACTTTAAGTCAT---TTATGTACATCGGGAAGAGGAAAAAA-A---------ATTACCCAATTCAATGGAAGTCAAACGAAGAAGCAGAACAGAGCTACCAG-AAAAACATGATAAGAGTTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTGG--------GGAACTTTTC------------------------CTTGCAAGCCAAGTTAA--------CTTTTGTTCAGATAGAATTCTCAGAT-GAAAA-----------------------------------------------A-GACAGAAATTATAGTCTATGGCTGACAAAATATAGAGAGTCTGCCCAGAGACTTTTGCTATTCTAAGCTAGAATCATAAGGTTAATACACTCCAATGAAG----GAGAAAACAAGA---ACCAGCTCTTGAGCATACTTGAAGTCT-GGACCAAATCTGAGTTGTTCAGA---TACTCATATTTTCACCCTGATTTAAGATGATCTGATATGGGTAATGCTTGCATAAGCAAAACTTCTGGAGGAACTTATCTCCATAGTAGACAACAAGGTAATCTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90467622 519 - 115148730 AGTTATTTGTGTGTTATAGAGGATATAGTGATATTGATATACTTTAAGTCAT---TTATGTACATTGGGAAGAGGAAAAAA-AA--------GTTACCCAATTAAATGGAAGTCAAAAGAGGAAGCAGAACAGAGCTACCAG-AAAAACATGATAAGAGTTAAAGAAGATGGGAACTCAAAGAGGAAAACTATTACTGAAT--TTGG--------GGAACTTTTC------------------------CTTGCAAGCCAAGTTAA--------CTTTTGTCCAGCTAGAATTCTTGGAT-GAAAA-----------------------------------------------A-GACAGAAATTAAAGTCTATGGCTGACAAAATACAGAGAGTCTGCCCAGAGATTTCTGCTATTCTAAGCTAGAATCATAAGGTTAATATTCTCCAATGAAG----GAGAAAACAAGA---ACCAGCTCTTGAGCATACTTGAAGTCTGGGACCAAATCTGAGTTGTTCAGA---TACTCATATTTTCACCCTGATTTAAGATAATCTGATATGGGTAATGCTTGCATAAGCGAAACTTCTGGAGGAACTTATCTGCATAGTAGACAACAAGGTAATCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131409773 538 + 190429646 AGTTATTTGTGTGTTATAGAGAATATAGTGATATTGATATACTTTATGTCAT---TTACGTACATCAGGAAGAGGAAAAAA-AA-----A--GTTACTCAATTCAATGGAAGTCAAAAGAAGAAGCAGAACAGAGCTACCAG-AAAACAATGATAAGAGTTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTGA--------GGAACTTTTC------------------------CTTGCAAGCCAAGTTAA--------CTTTTGTTCAGATAGAATTGTCAGAT-AAAAAAAA---------------ACCACCAC------------CAACAAC--A-AACAGAAATTAAAACCTATGGCTGACAAAATACAGAGAGTCTGCCCAGAGACTTTTGCTATTCTAAGCCAGAATCATAAGGTTCATATACACCAATGAAG----GAGAAAACAAGA---ACCAGCCCTTGAACATACTTGAAGACTGGGACTAAATCTGAGTTTTTCAGA---CACTCATATTTTCTCCTTGATTTAAGATGATCTGGTATGGGTAATGCCTGCATAAGCAAAGTTTCTGGAGGAACTTATCTCCATAGTAGACAACAAGGTAATCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130928780 538 + 189454096 AGTTATTTGTGTGTTATAGAGAATATAGTGATATTGATATACTTTATGTCAT---TTACGTACATCAGGAAGAGGAAAAAA-AA-----A--GTTACCCAATTCAATGGAAGTCAAAAGAAGAAGCAGAACAGAGCTACCAG-AAAACAATGATAAGAGTTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTGA--------GGAACTTTTC------------------------CTTGCAAGCCAAGTTAA--------CTTTTGTTCAGATAGAATTGTCAGAT-TAAAAAAA---------------ACCACCAC------------CAACAAC--A-AACAGAAATTAAAACCTATGGCTGACAAAATACAGAGAGTCTGCCCAGAGACTTTTGCTATTCTAAGCCAGAATCATAAGGTTCATATACACCAATGAAG----GAGAAAACAAGA---ACCAGCCCTTGAACATACTTGAAGACTGGGACCAAATCTGAGTTTTTCAGA---CACTCATATTTTCTCCTTGATTTAAGATGATCTGGTATGGGTAATGCCTGCATAAGCAAAGTTTCTGGAGGAACTTATCTCCATAGTAGACAACAAGGTAATCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34920451 539 - 40319822 AGTTATTTGTGTGTTATAGAGAATATAGTGATATTGATATACTTTATGTCAT---TTACGTACATCAGAAAGAGGAAAAAA-AA-----A--GTTACCCAATTCAATGGAAGTCAAAAGAAGAAGCAGAACAGAGCTACCAG-AAAACAATGATAAGAGTTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTGA--------GGAACTTTTC------------------------CTTGCAAGCCAAGTTAA--------CTTTTGTTCAGATAGAATTGTCAGATAAAAAAAAA---------------ACCACCAA------------CAACAAC--A-AACAGAAATTAAAACCTATGGCTGACAAAATACAGAGAGTCTGCCCAGATACTTTTGCTATTCTAAGCCAGAATCATAAGGTTCATATACACCAATGAAG----GAGAAAACAAGA---ACCAGCCCTTGAACATACTTGAAGACTGGGACCAAATCTGAGTTTTTCAGA---CACTCATATTTTCTCCTTGATTTAAGATGATCTGGTATGGGTAATGCCTGCATAAGCAAAGTTTCTGGAGGAACTTATCTCCATAGTAGACAACAAGGTAATCTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4474172 550 - 9219162 AGTTATTTGTGTGTTATAGAGAATATAGTGATATTGATATACTTTATGTCAT---TTACGTACATCAGGAAGAGGAAAAAA-AA-----A--GTTACCCAATTCAATGGAAGTCAAAAGAAGAAGCAGAACAGAGCTACCAG-AAAACGACGATAAGAGTTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTGA--------GGAACTTTTC------------------------CTTGCAAGCCAAGTTAA--------CTTTTGTTCAGATAGAATTGTCAGAT-AAaaaaaa---------------accaccaccaccaccaacaacaacaacaaa-aacaGAAATTAAAGCCTATGGCTGACAAAAT--AGAGAGTCTGCCCAGAGACTTTTGCTATTCTAAGCCAGAATCATAAGGTTCATATACACCAATGAAG----GAGAAAACAAGA---ACCAGCCCTTGAACATACTTGAAGACTGGGACCAAATCTGAGTTTTTCAGA---CACTCATATTTTCTCCTTGATTTAAGATGATCTGGTATGGGTAATGCCTGCATAAGCAAAGTTTCTGGAGGAACTTATCTCCATAGTAGACAACAAGGTAATCTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78999363 535 + 135778131 AGTTATTTGTGTGTTATAGAGAATATAGTGATATTGATATACTTTACATCAT---TTACGTACATCAGGAAGAGGAAAAAA-AA-----A--GTTACCCAATTCAATGGAAGTCAAAAGAAGAAGCAGAACAGAGCTACCAG-AAAACAATGATAAGAGCTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTGA--------GGAACTTTTC------------------------CTTGCAAGCCAAGTTAA--------CTTTTGTTCAGATAGAATTGTCAGAT-TAaaa------------------aacaacaa------------caacaac--a-aACAGAAATTAAAGCCTATGGCTGACAAAATACAGAGAGTCTGCCCAGAGACTTTTGCTATTCTAAGCCAGAATCATAAGGTTAATATACACCAATGAAG----GAGAAAACAAGA---ACCAGCCCTTGAACATACTTGAAGACTGGGACCAAATCTGAGTTTTTCAGA---CACTCATATTTTCTCCTTGATTTAAGATGATCTGGTATGGGTAATGCCTGCATAAGCAAAGTTTCTGTAGGAACTTATCTCCATGGTAGACAACAAGGTAATCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2769125 555 - 3013352 AGTTATTTGTGTGTTATAGAGAATACAGTGATATTGATATACTTTATGTCAT---TTACGTACATCAGGAAGAGGGAAAAA-AA-----A--GTTACCCAATTCAATGGAAGTCAAAAGAAGAAGCAGAACAGAGCTACCAG-AAAACAATGATAAGAGTTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTGA--------GGAACTTTTC------------------------CTTGCAAGCCAAGTTAA--------CTTTTGTTCAGATAGTATTGTCAGAT-AAaaaaaaaaaaaaaccaacaacaacaacaa------------caacaacaaa-aacaGAAATTAAAGCCTATGGCTGACAAAATACAGAGAGTCTGCCCAGAGACTTTTGCTATTCTAAGCCAGAATCATAAGGTTCATATACACCAATGAAG----GAGAAAACAAGA---ACCAGCCCTTGAACATACTTGAAGACTGGGACCAAATCTGAGTTTTTCAGA---CACTCATATTTTCTCCTTGATTTAAGATGATCTGGTATGGGTAATGCCTGCATAAGCAAAGTTTCTGGAGGAACTTATCTCCATAGTAGACAACAAGGTAATCTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5997495 540 + 8656713 CGTTATTTGTGTGTTATAGAGAACATAGTGATATTGATATACTTTAAGTCAT---TTATGTACATCAGTAAGAGGAAAAAA-AA-----A--GTTACCCAATTCAATGGAAGTCAAAAGAAGAAGCAGAACAGAGCTACCAG-AAAACAGTAATAAGAATTAAAGAAGATGGGAGCTCAAAGAGGAAAACTATCACTGAAT--TTGA--------GGAACTTTTC------------------------CTTGCAAGTCAAGTTAA--------CTTTTGTTCAGATAGAATTGTCAGAT-Aaaaaacaac-------------aacaacaa------------caacaaa--a-acTAAAATTTAAAGTCTATGGCTGACAAAATACAGAGAGTCTGCCCAGAGACTTTTGCCATTCTAAGCCAGAATCATAAGGTTAATATACACCAATGAAG----GAGAAAACAAGA---ACCAGCCCTTGAACATACTTGAAGACTGGGACCAAATCTGAGTTTTTCAGA---CACTCATATTTTCACCTTGATTTAAGATGATCTGTTATGGGTAATGCTTGCATAAGCAAAGCTTCTGGAGGAACTTATCTCCATAGTAGACAAGAAAGTAATCtt i colAng1.NW_012114544v1 C 0 I 1147 s calJac3.chr3 129427095 551 - 190850796 AATTATTTGTGCATTATAGAGAATATAGTGATATTGATATATTTTAAGTGAT---TTATGTATATTGGGAAGTGGAAAAATTGG-----A--ATTACCCAATTCAGTGGAAGCCAAAAGAAGAAGCAGAACAGCATTACCGG-AAAAACATGGTCAGAGTTAAAGAAGATTGGAGCTTAAGGAGTAAAAATATCACTGAAT--TTGG--------GGAACTTTTCCTTACAAGTTAATTTTTTTTTTAACTTGCAAGCCAAGTTGATTGCAATTCTTTTGTTCAGATAAAATGCTGAGAT-GAAAA-----------------------------------------------A-GACAGAAATCAAAGCCGATGGCTAACAAAATAT--AGAGTCTGGCCAGAAAATTCTGCTATTCTAAGCCAGCATCATAAGGTTAACATACTCTAATGAAG----GAGAAAACAAGA---ACCACACCTTGGGCATACTTGAGGACTGGGACCAAATCTTAGTTGTTCATA---TACTCATATTTGCACCTTGATTTAAGATGATCCAGTATAAGTAATGCTTGCAAAAACAGAGCTTCTGGAAGAACATATCTCCATAGTAGAAAACAAGGTATTCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6511546 555 - 25294431 AGTTATTTGTGCATTATAGAAAATATAGTGATATTAATATATTTTAAGTGAT---TTATGTACATTGGGAAGTGGAAAAAATGG-----A--GTTTTCTAATTCAGTGGAAGTCAAAAGAAGAAGCAGAACAGCATTTCGGGAAAAAACATGGAAAGAGTTAAATAAGATGGGAGCTCAAAGAGGAAAAATATCACTGAAT--TTGG--------GGAACTTTTCCTTGCAAGTTAATTCTTTTTTTAACTTGCAAGCCAAGTTGATTGCAGTTCTTTTGTTGAGACAGAATTCTCAGAT-GAAAA-----------------------------------------------A-GACAGAAATCAAAGCCTGTGGTTGACAAAATAT--AGAGTCTGGCCAGAGACTTCCGCTATTCTAAGCTAGAATCATAAGGTTAAGATACTCTAATGAAG----GAGAAAACAAGAACCACCACACCTTGGGCATACTTGAAGACTGGGACCAAATCGTAGTTGCTCAGA---TACTCATATTTTCACCTTGATTTAAGATGATCTGGTATAAGTGATGCTTGCAAAAGCAAAGCTTCTGGAAGAACGTATCTCTGTAGCAGACAACAAGGTAATCTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4066223 550 - 6311556 AGTTATTTGTGCATTATAGAGAATATAGTGATATTGTTACATTTTAAGTGAT---TTATGTACATTGGGAAGTGGAAAAAATGG-----A--GTTACCCAATTCAGTGGAAGTCAAAAGAAGAGGCAGAACAGCGTTACTGG-AAAAACATGGTAAGGGTTAAAGAAGATGGGAGCTCAAGGAGGAAAAATATCACTGAAT--TTGG--------GGAACTTTTCCTTGCAAGTTAATT-TTTTTTTAACTTGCAAACCAAGTTGTTTGTAGTTCTTTTGTTTAGATAGAATGCTCAGAT-GAAAA-----------------------------------------------A-GACAGAAATCAAAGCCTATGGCTGACAAAATAT--AAAGTCTGGCCAGAGGCTTCTGCTATTCTAAGCTAGAATCATAAGGTTAACATACTCTAATGAAG----AAGAAAACAAGA---ATCACATCTTGGGCATACTAGAAGACTGGGACCAAATCTTAGTTGTTCAGA---TACTCATATTTTCACCTTGATTTAAGATGATCTGGTATAAGTAATGCTTGCAAAAGCAAAGCTTCTGGAAGAACGTATCTCCATAGTAGACAACAAGGTAATCTT i cebCap1.NW_016107420v1 I 7 C 0 s aotNan1.NW_018507635v1 14921829 551 + 15034901 AGTTAATTGTGCATTATAGAGAATATAGTGATATTGATATATTTTAAGTGAT---TTATGTACATTCGGAAGTGGAAAAAATGG-----A--GTTACCCAATTCAGTGGAAGTCAAAAGAAGCAGCAGAACGGCATTACTGG-AAAAACATGATAAGAGTTAAAGAAGATGGGAGCTCAAGGAGGAAAAATATCACTGAAT--TTGG--------GGAACTTTTCCTTGCAAGTTAATTATTTTTTTAACTTGCAAGCCAAGTTGATTGCAGTTCTTTTGTTCAGATAGAATGCTCAGAT-GAAAA-----------------------------------------------A-GACAAAAATCAAAGCCTATGGCTGACAAAATAT--AGAGTCTGGCCAGAGACTTGTGATATTCTAAGCTAGAATCATAAGGTTAACATACTCTAATGAAG----GAGACAGCAAGA---ACCACTCCTTGGGCATACTTGAAGACTGGGACCAAATCTTAGTTGTTGAGA---TACTCATATTTTCACCTTGATTTAAGATGATCTGGTATAAGTAATGCTTGTAAAAGCAAAGCTTCTGGAAGAATGTATCTCCATAGTAGACAACAAGGTAATCTT i aotNan1.NW_018507635v1 I 7 C 0 s otoGar3.GL873702 945155 534 - 3201129 ACATATTCATACGTTATAGGGAATATAGTGATATTGACCTGCTTTAAGTCACGAATTATGTA------GTAAAGGAAAAAC-AAGTATTA--GTCAGTCAATCCAATGGAAGTCAAAGGAAGAGAAAGAACAG--TCACAGG-AAATACAT---AAAAATTAGAGAAGATGGGATTTCAAGGAGAAAAATTATCACAGAATAATTGATAACTAATGGTATTTACC------------------------CAGGCGGGTCATGTTAA--------TGTTTGTTCTGCTAGAATCTTCAGAT-GAAAA-----------------------------------------------A-GGCAAACATTTAAGCCTACAGCTCACAAAGCATGGGAAGTCTAGCCAGAGACCTAGTCTATGCTAAGCTAGAATCATAAGGCTAACAGATTCCAACTAAGTGTAAAGCAAGCAAGA---GCCGACTGTTGAGCTCTCTTTGACACTGGGAGCAAATCTGAGTTTCCCAGGGACTATTAAAATTTTGACCTTGATTTGAAGTAATCTGGAATGGGTACAGCCTGGCAAAGCAAAGCTTCTGGATGAAGGTATTTTCATAATAGGTAATAATATAAACTC i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I a score=749280.000000 s hg38.chr9_KI270719v1_random 49317 111 + 176845 AAACTATCctg-acactaattgg-gtgtataaacttggccaagtcattt-ttccctttgagtctcagttttgtcaactgta---------acatgaatatgaaagtaactaacttgtaggtct s panTro5.chr4 135074128 111 + 194502333 AAACTATCctg-acactaattgg-gtgtataaacttggccaagtcattt-ttccctttgagtctcagtttcctcaagtgta---------acgtgaaaatgaaagtaactaacttgtaggtct i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 54486 111 - 70559 AAACTATCctg-acactaattgg-gtgtataaacttggccaagtcattt-ttccctttgagtctcagtttcctcaactgta---------acgtgaatatgaaagtaactaacttgtaggtct i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468141 111 - 115148730 AAATTATCctg-acactaattgg-gtgtataaactcggccaagtcattt-ttccctgtgggtctcattttcctcaactgta---------atgtgaatataaaagtaactaacttgtaggtct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131410311 112 + 190429646 AAACTATCctg-acactatttgg-gtatataaactttaccaagtcatttattccctgtgaatctcagtttccttaactgta---------acgtgaatttaaaagtaactaacttgtaggtct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130929318 112 + 189454096 AAACTATCctg-acactatttgg-gtatataaactttaccaagtcatttattccctgtgaatctcagtttccttaactgta---------acgtgaatataaaagtaactaacttgtaggtct i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34920990 112 - 40319822 AAACTATCctg-acactatttgg-gtatataaactttaccaagtcatttattccctgtgaatctcagtttccttaactgta---------acgtgaatataaaagtaactaacttgtaggtct i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4474722 112 - 9219162 AAACTATCctg-acactatttgg-gtatataaactttaccaagtcatttattccctgtgaatctcagtttccttaactgta---------acgtgaatataaaagtaactaacttgtaggtct i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 78999898 112 + 135778131 AAACTATCctg-acactattcgg-gtatataaactttactaagtcatttattccctgtgaatctcagtttccttaactgta---------atgtgaatataaaagtaactaACTTGTAGGTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2769680 112 - 3013352 AAACTATCctg-acactatttgg-gtatataaactttaccaagtcatttattccctgtgaatctcagtttccttaactgta---------acgtgaatataaaagtaactaactagtaggtct i manLeu1.NW_012103277v1 C 0 C 0 s calJac3.chr3 129427646 117 - 190850796 AAACCATACTT-Acactaattgg-gtgtataaacttggccaagtcaattattacctgtgagcctcacttttctcaaacataagtgagactaagtgaATATAAAAG----TAATTTGTAGTTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6512101 109 - 25294431 AAACCATACTTAAcactaattgg-gcgtataaacttggccaagtcaattattatctgtgagtctcatttttctcaaccata---------aagtgaatataaaag----taATTTGTAGGTAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4066773 108 - 6311556 AAACCATACTT-Acactatttgg-gcatataaacttggccaagtcaattattacctgtgagtctcatttttctcaaccata---------aactgaatataaaag----taatttgtaggtat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14922380 106 + 15034901 AAACCATACTT-Acactaattgg-gcgtataaacttggccaagtcaattattacctgtaagtctcatttttctcaaccata---------aagt--ATATAAAAG----TAATTTGTAGGTAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 945689 111 - 3201129 ATACAGT--TT-ATATTAATTAATGAAtgtgaactttgccaagtcattttatctctgttattgtcagttttgtcaactgta---------aagtgaatataagagtaaataacttgtaggttt i otoGar3.GL873702 C 0 I 5 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e colAng1.NW_012114544v1 5998035 1147 + 8656713 I a score=1195738.000000 s hg38.chr9_KI270719v1_random 49428 179 + 176845 gtattaaaaattaagtCAATTATTTTGGTAAATCAGTTGTATGCAATATAGCGTACAT----GAGAGAGAGAGAGAG--TTTGTGTGCATGTGTTTAGAGAGAGATG--GAGAGAGAGACACACATACACAGAGAAGAATCAGTATATTGTTAAGGATAACA--ACATCTAGAaacaaatcgacagaca s panTro5.chr4 135074239 180 + 194502333 gtattaaaaataaagtCAATTATTTTGGTAAATCATTTGTATGCAATATAGTGTACAT----GAGAGAGAGAGAGAGAGTTTGTGTGCATGTGTTTAGAGAGATATG--GAGAGAGAGACACACATACACAGAGAA---TCAGTATATTGTTAAGGATAACAGAACATCCAGAAACAAATCGACAGACA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 54597 180 - 70559 gtattaaaaataaagtcaattattttggtaaatcatttgtatgcaatatagcatacaT----GAGAGAGAGAGAGAGAGTTTGTGTGCATGTGTTTAGAGAGAGATG--GAGAGAGAGACACACATACACAGAGAAGAATCAGTATACTGTTAAGGATAACA--ACATCCAGAAACAAATC-ACAGACA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468252 165 - 115148730 gtattaaaaataaagtCAATTATTTTGTTAAATCATTTGTATGCAATATAGTGTACAT----GAGAGAGAGAG------TTTGTGTACATGTGTTT--------------AGAGAGAGACACACATACACAGAGAATAATCAGTACATTGTTAAGGATAACAGAACATCCAGAAACAAATCGACAGACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131410423 179 + 190429646 gtattaaaaatgaagtCAATTATTTTGGTAAATCATTTGTATGCAATATAGTGTGCAT----GAGAGAGAGAGAG----TTTGTGTGCATCTGCTTagagagagatg--gagagagagacacacatacacagagaagaATCAGCATATTGTTAAGGATAACTGAGCATTCAGAAACAAATTGAAAGACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130929430 179 + 189454096 gtattaaaaatgaagtCAATTATTTTGGTAAATCATTTGTATGCAATATAGTGTGCAT----GAGAGAGAGAGAG----TTTGTGTGCATCTGTTTagagagagatg--gagagagagacacacatacacagagaagaATCAGCATATTGTTAAGGATAACTGAGCATTCAGAAACAAATTGAAAGACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921102 177 - 40319822 gtattaaaaatgaagtCAATTATTTTGGTAAATCATTTGTATGCAATATAGTGTGCAT------GAGAGAGAGAG----TTTGTGTGCATCTGTTTagagagagatg--gagagagagacacacatacacagagaagaATCAGCATATTGTTAAGGATAACTGAGCATTCAGAAACAAATTGAAAGACA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4474834 179 - 9219162 gtattaaaaatgaagtCAATTATTTTGGTAAATCATTTGTATGCAATATAGTGTGCAT----GAGAGAGAGAGAG----TTTATGTGCATCTGTTTagagagagatg--gagagagagacacacatacacagagaagaATCAGCATATTGTTAAGGATAACTGAACATTCAGAAACAAATTGAAAGACA i cerAty1.NW_012000798v1 C 0 I 305 s chlSab2.chr7 79000010 185 + 135778131 GTATTAAAAATGAAGTCAATTATTTTGGCAAATCATTTGTATGCAATATAGTGTGCATgagagagagagagagag----tttgtgtgcatgtgtttagagagagatggagagagagagacacacatacacagagaagaATCAGCATATTGTTAAGGATAACTGAACATTCAGAAACAAATTGAAAGACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2769792 179 - 3013352 gtattaaaaatgaagtCAATTATTTTGGTAAATCATTTGTATGCAATATAGTGTGCAT----GAGAGAGAGAGAG----TTTGTGTGCATCTGTTTagagagagatg--gagagagagacacacatacacagagaagaATCAGCATATTGTTAAGGATAACTGAACATTCAGAAACAAATTGAAAGACA i manLeu1.NW_012103277v1 C 0 C 0 s calJac3.chr3 129427763 173 - 190850796 GCATTAAAAATAAAGTCAATTATTTTGGTAAATCATTTGGATGCAATATAGTGTGCAT----GAGAGAGAGAGAG----TTTGTAAGCATGTGTTTAGAGAGAGACG--GAGAGGGAGACATACATCCACAGAGAAGGGT------ATTGCTAAGGATAACAAAATATCCAGAAACAAATCAGTAGACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6512210 173 - 25294431 GTATTAAAAACGAAGTCAATTATTTTGGTAAATCATTTGTATGCAATATAGTGTGCGT----GAGAGAGACAGCG----TTTGTAAGCATGTGCTTAGAGAGAGATG--GAGAGCGAGACATACATCCACAAGGAAGGAT------ATTGTTAAGGATAACAAAACATCCAGAAACAAATCAACAGACA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4066881 177 - 6311556 gtgttaaaaataaagtcagttaTTTTGGTAAATCATTTGTATGCAATATAGTGTGCATgagagagagagagagag----TTTGTAAGCATGTGTTTAGAGAGAGATG--GAGAGGGAGACATACATCCACAGAGAAGGAT------ATTGTTAAGGATAACAAAACACCCAGAAACAAATCAATAGACA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14922486 173 + 15034901 GTATTAAAAATAAAGTCAATTATTTTGGTAAATCATTTGTATGCAATATAGTGTGGAT----GAGAGAGAGAGAG----TTTGTAAGCATGTGTTTAGAGAGAGGTG--GAGAGGGAGACATACATCCACAGAAAAGGAT------ATTGTTAAGGATAATAGAACATCCAGAAACAAATCAATAGACA i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e otoGar3.GL873702 945800 5 - 3201129 I e colAng1.NW_012114544v1 5998035 1147 + 8656713 I a score=943859.000000 s hg38.chr9_KI270719v1_random 49607 128 + 176845 agaaaaacaatttaagtaataga---attttcagacagaagttaaagaacaaaacatatgcttaaagatgcccacagggaaatacaaatatgatcatggtagatttagaaaggaaatacctgctagaagta s panTro5.chr4 135074419 128 + 194502333 AGAAAAACAATTTAAATAATATA---ATTATCAGACAGAAGTTAAAGAACAAAACATACGCTTAAAGATGCACACAGGAAAATACAAATATGATCATGGTAGATTTAGAAAGGAAATACCTGCTAGAAGTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 54777 128 - 70559 AGAAAAACAATTTAAATAATAGA---ATTATCAGACAGAAGTTAAAGAACAAAACATATGCTTAAAGATGCACACAGGAAAATACAAATATGATCATGGTAGATTTAGAAAGGAAATACCTGCTAGAAGTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468417 128 - 115148730 AGAAAAACAATTTAAGTAATAGA---ATTATCAGACAGAAGTTAAAGAACAAAATATATGCTTAAAGATGCACACAgaaaaatacaaatatgatcgtggtagatttagaaaggaaatacctgctagaagta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131410602 128 + 190429646 AGAAAAACAATTTAAATAATAAA---ATTATCAGACAGAAGTTAAAGAACAAAATATATGCTTAAAGATGTGCACAGGGAAATACAAATATGATCATGGTAGATTTAGAAAGGAAATACCTGCTAGAAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130929609 128 + 189454096 AGAAAAACAATTTAAATAATAAA---ATTATCAGACAGAAGTTAAAGAACAAAATATATGCTTAAAGATGTGCACAGGGAAATACAAATATGATCATGGTAGATTTAGAAAGGAAATACCTGCTAGAAGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921279 128 - 40319822 AGAAAAACAATTTAAATAATAAA---ATTATCAGACAGAAGTTAAAGAACAAAATATATGCTTAAAGATGTGCACAGGGAAATACAAATATGATCATGGTAGATTTAGAAACGAAATACCTGCTAGAAGTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4475318 128 - 9219162 AGAAAAACAATTTAAATAATAAA---ATTATCAGACAGAAGTTAAAGAACAAAATATATGCTTAAAGATGCGCACAGGGAAATACAAATATGATCATGGTTGATTTAGAAAGGAAATACCTGCTAGAAGTA i cerAty1.NW_012000798v1 I 305 C 0 s chlSab2.chr7 79000195 128 + 135778131 AGAAAAACAATTTAAATAATAAA---ATGATCAGACAGAAGTTAAAGAACAAAATATATACTTAAAGATGCACACAGGGAAATACAAATATGATCATGGTAGATTTAGAAAGGAAATACCTGCTAGAAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2769971 128 - 3013352 AGAAAAACAATTTAAATAATAAA---ATTATCAGACAGAAGTTAAAGAACAAAATATATGCTTACAGATGCGCACAGGGAAATACAAATATGATCATGGTAGATTTAGAAAGGAAATACCTGCTAGAAGTA i manLeu1.NW_012103277v1 C 0 C 0 s calJac3.chr3 129427936 124 - 190850796 AGCAAATTAATTTAAATAATAGA---ATTATCCGACAGAAGTTAAAGAATGAAATACACGCTCAAAGATGCACACAGGAAAATACAAATATGACAATGGTAGATTTAGA----AATTACCTGCTAGAAGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6512383 131 - 25294431 AGCAAAACaatttaaataataaaattattatCAGACGGAAGTTAAAGAACAAAATACATGCTCGGAGATGCACACAGGAAAATACAAATATGATAATGGCAGATTTAGAAAGGAACTACCTactagaagta i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4067058 128 - 6311556 AGCAAAGCAATTTAAATAATAGA---ATTATCAGACAGAATTTAAAGAACAAAATACATGCTCAAAGATGCACACAGGAAAATACAAATATAATAATAGTAGATTTAGAAAGGAACTACCTGCTAGAAGTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14922659 128 + 15034901 AGCAAAGCAATTCAAATAATAGA---ATTATAAGACAGAAGTTAAAGAACAAAATACATACTCAAAGATGCACACAGGAAAATGCAAATATGATAATGGTAGATTTAGAAAGGAACTACCTGCTAGAAGTA i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1761229 3712 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e otoGar3.GL873702 945800 5 - 3201129 I e colAng1.NW_012114544v1 5998035 1147 + 8656713 I a score=514316.000000 s hg38.chr9_KI270719v1_random 49735 77 + 176845 acagagaactactggaaaattaatgaagtgcagtaggaagaaagaaaataaattattgaagaaaagtttcaagatac s panTro5.chr4 135074547 77 + 194502333 ACAGAGAATTACTAGAAAATTAACGAAGTACAGTAGGAAGAAAGAAAATAAATTATTGAAGAAAAGTTTCAAGATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 54905 77 - 70559 ACAGAGAACTACTAGAAAATTAACGAAGTGCAGTAGGAAGAAAGAAAATAAATTATTGAAGAAAAGTTTCAAGATAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468545 77 - 115148730 acagagaactactagaaagttaacgaagtgcactacgaagaaagaaaataaattattgaagaaaagtttcaagacac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131410730 77 + 190429646 ACAGAGAACTACTGGAAAATTAACCAAGTGCAGTAGGAAGAAAGAAAACAAATTATTGAAGAAAAGTTTCAAGATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130929737 77 + 189454096 ACAGAGAACTACTGGAAAATTAACCAAGTGCAGTAGGAAGAAAGAAAACAAATTATTGAAGAAAAGTTTCAAGATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921407 77 - 40319822 ACAGAGAACTACTGGAAAATTAACCAAGTGCAGTAGGAAGAAAGAAAACAAATTATTGAAGAAAAGTTTCAAGATAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4475446 77 - 9219162 ACAGAGAACTACTAGAAAATTAACCAAGTGCAGTAGGAAGAAAGAAAACAAATTATTGAAGAAAAGTTTCAAGATAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000323 77 + 135778131 ACAGAGAACTACTAGAAAATTAACCAAGTACAGTAGGAAGAAAGAAAACAAATTACTGAAGAAAAGTTTCAAGATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770099 73 - 3013352 ACAGAGAACTACTAGAAAATTAACCAAATGCAGTAGG----AAGAAAACAAATTGTTGAAGAAAAGTTTCAAGATAT i manLeu1.NW_012103277v1 C 0 C 0 s calJac3.chr3 129428060 77 - 190850796 ACAGAGAACTACTAAAAAATTAACCAAGTGCAGTAAGAATAAATAAAATAAAATGCTGAAGAAAAATTACCAGATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6512514 76 - 25294431 atagagaactactaaaaaattaagcaagttcagtaagaataaataaaataaaatgttgaag-aaaatgaccagctat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4067186 77 - 6311556 ATAGAGAACTATTAAAAAATTAACCAAGTGCAGTAAGAATAAATAAAATAAAATGTTGAAGAAAAATTACCAGACAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14922787 77 + 15034901 ATGGAGAACTACTAAAAAATTAACCAAGTGCAATAAGAATAAATAAAATAAAATGTTGAAGAAAAATTACCAGATAT i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1764941 68 + 5974691 acagagaac----agacaaccgggaggggggaggggagaaaaataaaataaa----taaataaatctttaaaaaAA- i dasNov3.JH569232 I 3712 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e otoGar3.GL873702 945800 5 - 3201129 I e colAng1.NW_012114544v1 5998035 1147 + 8656713 I a score=494699.000000 s hg38.chr9_KI270719v1_random 49812 66 + 176845 aaaggatagagttaaacattaatatatgtctaaacttt------accaggaaaagagagacaaaggcaataa s panTro5.chr4 135074624 65 + 194502333 GAAGGATAGAGTTAAACGTTAATATATGTCTAAACTTT------ACCAGGAAAAGGAAGACAAAGGCAATA- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 54982 65 - 70559 -AAGGATAGAGTTAAACGTTAATATATGTCTAAACTTT------ACCAGGAAAAGAGAGACAAAGGCAATAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468622 66 - 115148730 aaaggatagagttaaacgttaatatatgtctaaacttt------accaggaaaagagaaacaaaggcaataa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131410807 66 + 190429646 AAAGGATAGAGTTAAACGTTAATATATGTCTAAACTTT------ACCAGGAAAAGAGAGACAAAGGCAATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130929814 66 + 189454096 aaaggatagagttaaacgttaatatatgtctaaacttt------accaggaaaagAGAGACAAAGGCAATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921484 66 - 40319822 aaaggatagagttaaacgttaatatatgtctaaacttt------accaggaaaagAGAGACAAAGGCAATAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4475523 66 - 9219162 Aaagggtaaagttaaacgttaatatatgtctaaacttt------accaggaaaagAGAGACAAAGACAATAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000400 55 + 135778131 AAAGGATAGAGTTAAACGTTAATATATGTCTAAACTTT-----------------AGAGACAAAGGCAATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770172 66 - 3013352 AAAGGATAGAGTTAAACGTTAATATATGTCTAAACTTT------ACCAGGAAAAGAGAGACAAAGGCAATAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999182 66 + 8656713 AAAGGATAGAGTTAAACGTTAATATACGTCTAAACTTT------ACCAGGAAAAGAGAGACAAAGGCAATAA i colAng1.NW_012114544v1 I 1147 C 0 s calJac3.chr3 129428137 72 - 190850796 AGAGGATAAAGTTAAACATTCATACATAACTAACCTTTAACTTCACCAGGAAAACAAAGACAAAGACAAAAA i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6512590 72 - 25294431 agaggataaagttaaacattcatacatatctaacctttaacttcaccaggaaaacatagacaaaggcaataa i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4067263 72 - 6311556 AGAGGATAAAGTTAAACATTCATACATGTCTAACCTTTAACATCACCAGGAAAACACAGACAAAGGCAATAA i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14922864 72 + 15034901 AGATGATAAAGTTAAACATTCGTACATGTCTAACCTTTAACTTCACCAGGAAAACACAGACAAAGGCAGTAA i aotNan1.NW_018507635v1 C 0 I 1 s dasNov3.JH569232 1765009 54 + 5974691 AAAGAAC----TTGGAATTTAGGAAA---CTAGCAATT------ATTAAGATAATAGTAATATAGGT----- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e otoGar3.GL873702 945800 5 - 3201129 I a score=157710.000000 s hg38.chr9_KI270719v1_random 49878 27 + 176845 ctaaggaaataatagagaatg-ttttta s panTro5.chr4 135074689 27 + 194502333 CTAAGGAAATAATAGAGAATG-TTTTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55047 27 - 70559 CTAAGGAAATAATAGAGAATG-TTTTTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468688 27 - 115148730 ctaaggaaataatagagaatg-ttttta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131410873 27 + 190429646 CTAAGGCGATAATAGAGAATG-TTTTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130929880 27 + 189454096 CTAAGGCGATAATAGAGAATG-TTTTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921550 27 - 40319822 CTAAGGCGATAATACAGAATG-TTTTTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4475589 27 - 9219162 CTAAGGCGATAATAGAGAACG-TTTTTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000455 27 + 135778131 CTAAGGCGATAATAGAGAATG-TTTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770238 27 - 3013352 CTAAGGCGATAATAGAGAATG-TTTTTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999248 27 + 8656713 CTAAGGCGATAATAGAGAATG-TTTTTA i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6512663 28 - 25294431 ttatgaggttaatagataatgcttttta i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4067336 28 - 6311556 TCAGGAGATTAATAGATAATGTTTTTTA i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14922937 28 + 15034901 TCAGGAGATTAATAGATAATGTTTTTTA i aotNan1.NW_018507635v1 I 1 C 0 s dasNov3.JH569232 1765063 25 + 5974691 CCATGAATACAATGAAGAA---TTTGAG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e otoGar3.GL873702 945800 5 - 3201129 I e calJac3.chr3 129428209 2 - 190850796 I a score=768927.000000 s hg38.chr9_KI270719v1_random 49905 100 + 176845 gtactgattgaagacagatataagcagatttaagcaggtcaacaaattctgagtggagtaagaaaagtac-----agtgaagaaaacaaaagacaaagccaaaat-- s panTro5.chr4 135074716 100 + 194502333 GTACCGATTGAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTGAGTGGAGTAAGAAAAGTAC-----AATGAAGAAAACAAAAGACAAAGCCAAAAT-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55074 100 - 70559 GTACTGATTGAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTGAGTGGAGTAAGAAAAGTAC-----AATGAAGAAAACAAAAGACAAAGCCAAAAT-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468715 100 - 115148730 gtactgattgaagacagatacaagcagatctaagcaggtcaacaaattctgagtggagtaagaaaagtgc-----aatgaagaaaacaaaagacaaagcaaaaat-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131410900 99 + 190429646 CTACTGATTAAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTGAGTGGAGTAAGGAAAGTAC-----AATGAAGAAAACAAAAGACAAAGC-AAAAT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130929907 99 + 189454096 CTACTGATTAAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTGAGTGGAGTAAGGAAAGTAC-----AATGAAGAAAACAAAAGACAAAGC-AAAAT-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921577 99 - 40319822 CTACTGATTAAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTGAGTGGAGTAAGGAAAGTAC-----AATGAAGAAAACAAAAGACAAAGC-AAAAT-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4475616 99 - 9219162 CTACTGATTAAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTGAGTGGAGTAAGGAAAGTAC-----AATGAAGAAAACAAAAGACAAAGC-AAAAT-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000482 98 + 135778131 CTACTGATTAAAGACAGATATAAGCAGATTTAAGCA-GTTAACAAATTCTGAGTGGAGTAAGGAAAGTAC-----AAGGAAGAAAACAAAAGACAAAGC-AAAAT-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770265 99 - 3013352 CTACTGATTAAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTGAGTGGAGTAAGGAAAGTAC-----AATGAAGAAAACAAAAGACAAAGC-AAAAT-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999275 99 + 8656713 CTACTGATTAAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTGAGTGGAGTAAGGAAAGTAC-----AATGAAGAAAACAAAAGACAAAGC-AAAAT-- i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6512691 98 - 25294431 gtactgattaaagacagacataagcagatttaagcaggtcaaaaaattctaagtggaataaggaaaGTAC-----AATGAAAAAAAC-AAAGACAAAGC-AAAAA-- i saiBol1.JH378129 C 0 I 8 s cebCap1.NW_016107420v1 4067364 98 - 6311556 GTACTGATTAAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTAAGTGGAGTaagaaaagtac-----aatgaagaaaac-aaagacaaagc-aaaaa-- i cebCap1.NW_016107420v1 C 0 I 7 s aotNan1.NW_018507635v1 14922965 98 + 15034901 GTACTGATTAAAGACAGATATAAGCAGATTTAAGCAGGTCAACAAATTCTAAGTACAGTAAGAAAAGTAC-----AATGAAGAAAAC-AAAGACAAAGC-AAAAA-- i aotNan1.NW_018507635v1 C 0 I 5 s otoGar3.GL873702 945805 69 - 3201129 gttctaaggaaagaaaaatatatgcaGACTGAAACAGGT------------------------------C-----actgaagaaaataaaagacaaaga-gaaaa-- i otoGar3.GL873702 I 5 I 1 s dasNov3.JH569232 1765088 97 + 5974691 GTATT--CTTAAGGAAGCAAGAAGACAATTGGAACCGGTGAACTAATT---AATCATGTTGGAAAATATCCAGGAAATTAAGAAAATAAA----CAAGT-ATAATGA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e calJac3.chr3 129428209 2 - 190850796 I a score=849130.000000 s hg38.chr9_KI270719v1_random 50005 95 + 176845 tctgtaaagcaacct----------------gaaaataaggcttattaccattaaataa-----caacaTTTCAGTCTATAGAAACTTACATCCTAGGAGAGGGAATACTTTAAAT s panTro5.chr4 135074816 95 + 194502333 TCTGTAAAGCAGCCT----------------GAAAATAAGGCTTATTACCATTAAATAA-----CAACATTTCAGTCTATAGAAACTTACATCCTAGGAGCGGGAATACTTTAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55174 95 - 70559 TCTGTAAAGCAGCCT----------------GAAAATAAGGCTTATTACCATTAAATAA-----CAACATTTCAGTCTATAGAAACTTACATCCTAGGAGAGGGAATACTTTAAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468815 95 - 115148730 tctgtaaaccagcct----------------gaaaataaggcttattaccattaaataa-----caacaTTTCAGTCTACAGAAACTTATATCCTAGGAGAGGGAATACTTTAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131410999 95 + 190429646 TCTGTAAAGCAGCCT----------------GAAAATAGGACTTATTACCGTTAAATAA-----CAACCTTTCAGTCTGTAGAAACTTGCATCCTAGGAGAGGGAATACTTTAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930006 95 + 189454096 TCTGTAAAGCAGCCT----------------GAAAATAGGACTTATTACCGTTAAATAA-----CAACCTTTCAGTCTGTAGAAACTTGCATCCTAGGAGAGGGAATACTTTAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921676 95 - 40319822 TCTGTAAAGCAGCCT----------------GAAAATAGGACTTATTACCGTTAAATAA-----CAACCTTTCAGTCTGTAGAAACTTGCATCCTAGGAGAGGGAATACTTTAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4475715 95 - 9219162 TCTGTAAAGCAGCCT----------------GAAAATAGGACTTATTACCGTTGAATAA-----CAACCTTTCAGTCTGTAGAAACTTACATCCTAGGAGAGGGAATACTTTAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000580 95 + 135778131 TCGGTAAAGCAGCCT----------------GAAAATAAGACTTATTACCATTAAATAA-----CAACCTTTCAGTCTGTAGAAACTTACATCCTAGGAGAGGGAATACTTTAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770364 95 - 3013352 TCTGTAAAGCAGCCT----------------GAAAATAGGACTTATTACCGTTAAATAA-----TAACCTTTCAGTCTGTAGAAACTTACATCCTAGGAGAGGGAATACTTTAAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999374 95 + 8656713 TCTGTAAAGCAGCCT----------------GAAAATAAGACTTATTACCATTAAATAA-----CAACATTTCATTCTATTGAAACTTACATGCTAGGAGAGGGAATACTTTAAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129428211 95 - 190850796 TCTGTAAAGCAGCCT----------------TAAAATAAGGCTAATTACAATTAAGTAA-----CAAAATTTTGGTCTATAGAAACTTACATCCTAGGAGAGACAATACTTTAAAT i calJac3.chr3 I 2 I 499 s saiBol1.JH378129 6512797 95 - 25294431 TCTGTAAATCAGCCT----------------GAAAATAAGGCTAATTACAATTAAGTAA-----TAAAATTTCGGTCTATAGAAACTTACATCCTATGAGAGGGAGTACTTTAAAT i saiBol1.JH378129 I 8 C 0 s cebCap1.NW_016107420v1 4067469 95 - 6311556 TCTGTAAAGCAGCCT----------------GAAAATAAGGCGAATTACAATTAAGTAA-----CAAAATTTTGGTCTATAGAAACTTACATCCTAGGAGAGGGAGTACTTTAAAT i cebCap1.NW_016107420v1 I 7 C 0 s aotNan1.NW_018507635v1 14923068 95 + 15034901 TCTGTAAAGCAGCCT----------------GAAAATAAGGCTAATTATATTTAAGTAA-----CAAAATTTCGGTCTATAGAAACTTACATCCTAGGAGAGGGAGTACTTTAAAT i aotNan1.NW_018507635v1 I 5 C 0 s otoGar3.GL873702 945875 100 - 3201129 tcttaaaagcgggct----------------gaaaataagacatatcaccactaaaagaaaaacaaacttttaagtctatagcaacttctAATCTAGGAAAGGGAATGTGTTAAAT i otoGar3.GL873702 I 1 C 0 s dasNov3.JH569232 1765185 104 + 5974691 TTAGTATAGTGACTTCCAATACATAATATGAAAGAACAGATATGAATATGATTGGG-AA-----CTATTTTCCA---TATGAGAATTTCTTGACAAGGAAATTGAaaa---taaat i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I a score=74857.000000 s hg38.chr9_KI270719v1_random 50100 7 + 176845 AAAAAAG s panTro5.chr4 135074911 7 + 194502333 AAAAAAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55269 7 - 70559 AAAAAAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468910 7 - 115148730 AAAAAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131411094 7 + 190429646 AAAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930101 7 + 189454096 AAAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921771 7 - 40319822 AAAAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4475810 7 - 9219162 AAAAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000675 7 + 135778131 AAAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770459 7 - 3013352 AAAAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999469 7 + 8656713 AAAAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129428805 7 - 190850796 AAAAAAA i calJac3.chr3 I 499 C 0 s saiBol1.JH378129 6512892 7 - 25294431 AAAAAAG i saiBol1.JH378129 C 0 I 533 s cebCap1.NW_016107420v1 4067564 7 - 6311556 AAAAAAG i cebCap1.NW_016107420v1 C 0 I 528 s aotNan1.NW_018507635v1 14923163 7 + 15034901 AAAAAAG i aotNan1.NW_018507635v1 C 0 I 529 s otoGar3.GL873702 945975 7 - 3201129 AAAAAAA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1765289 7 + 5974691 aaataaa i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I a score=-4429.000000 s hg38.chr9_KI270719v1_random 50107 1 + 176845 -T s panTro5.chr4 135074918 1 + 194502333 -T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55276 1 - 70559 -T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468917 1 - 115148730 -G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131411101 1 + 190429646 -G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930108 1 + 189454096 -G i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921778 1 - 40319822 -G i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4475817 1 - 9219162 -G i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000682 1 + 135778131 -G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770466 1 - 3013352 -G i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999476 1 + 8656713 -G i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129428812 1 - 190850796 -G i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6513432 1 - 25294431 -G i saiBol1.JH378129 I 533 C 0 s otoGar3.GL873702 945982 1 - 3201129 -G i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1765296 1 + 5974691 c- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e aotNan1.NW_018507635v1 14923170 529 + 15034901 I e cebCap1.NW_016107420v1 4067571 528 - 6311556 I a score=2484597.000000 s hg38.chr9_KI270719v1_random 50108 277 + 176845 AATGGATGAAAGGAGAAAAATTCCATCAAGTGGGATAACTGTGATCCATAAAGAAGTAGCAGGTGAGATG-GGGAGT---AAAAAAAC-AA-----ACATATATAAATCCTCTTATTTTATATATTATAG----CTCAATTTTATTCCCATCTTTGATAATCCAAAAATTATACACTGATCAATATATCTGTTCTAAATGTTAAGA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACtggaggttcatgatgcatattaaaataagaaaggc s panTro5.chr4 135074919 277 + 194502333 TATGGATGAAAAGAGAAAAATCCCATCAAGTGGGATAACTGTTATCCATAAAGAAGTAGCAGGTGAGATG-GGGAGT---AAAAAAAC-AA-----ACATATATAAATCCTCCTATTTTATGTATTATAG----CTCAATTTTATTCCCATCTTTGATAATCCAAAAATTATACACTGATCAATATATCTGTTCTAAATGTTAAGA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACtggaggttcatgatgcatattaaaataagaaaggc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55277 277 - 70559 AATGGATGAAAAGAGAAAAATTCCATCAAGTGGGATAACTGTTATCCATAAAGAAGTAGCAGGTGAGATG-GGGAGT---AAAAAAAC-AA-----ACATATATAAATCCTCTTATTTTATATATTATAG----CTCAATTTTATTCCCATCTTTGATAATCCAAAAATTATACACTGATCAATATATCTGTTCTAAATGTTAAGA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACtggaggttcatgatgcatattaaaataagaaaggc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90468918 277 - 115148730 AACGGATAAAAAGAGAAAAATTCCATCAAGTGGGATAACTGTTATCCATAAAGAAGTAGCAGGTGAGATG-GAGAGT---AAAAAAAC-AA-----ACATATATAAATCCTCTTATTTTATATATTATAG----CTCAATTTTATTCCCATCTTTGATAATCCAAAAATTATACACTGATCAGTATATCTGTTCTAAATGTTAAGA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACtggaggttcatgatgcatactaaaataagaaaggc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131411102 275 + 190429646 AATGGAGGAAAAGAGAAAAGTTCCATGAAATGGGATAACTGTCATCCATAAAGAAGTAGCTGGTGAGATG-GGGAGT---AAAAAAAC-AA-----GCACATAGCAATCCTCTTATTTCATATA--AGAG----TTCAATTTTATTCCCAGATTTGATAATCCAAAAATTATACACTGATAAATATATCTGTTCTAAATGTTAAGA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACtggaggttcatgatgcatattaaaataagaaaggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930109 275 + 189454096 AATGGAGGAAAAGAGAAAAGTTCCATGAAATGGGATAACTGTCATCCATAAAGAAGTAGCTGGTGAGATG-GGGAGT---AAAAAAAC-AA-----GCACATAGAAATCCTCTTATTTCATATA--AGAG----TTCAATTTTATTCCCAGATTTGATAATCCAAAAATTATACACTGATAAATATATCTGTTCTAAATGTTAAGA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACTGGAGGTTCATGATGCATATTAAAATAAGAAAGGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34921779 275 - 40319822 AATGGAGGAAAAGAGAAAAGTTCCATGAAATGGGATAACTGTCATCCATAAAGAAGTAGCTGGTGAGATG-GGGAGT---AAAAAAAC-AA-----GCACATAGAAATCCTCTTATTTCATATA--AGAG----TTCAATTTTATTCCCAGATTTGATAATCCAAAAATTATAAACTGATAAATATATCTGTTCTAAATGTTAAGA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACtggaggttcatgatgcatattaaaataagaaaggc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4475818 275 - 9219162 AATGGATGAAAAGAGAAAAGTTCCATGAAATGGGATAACTGTCATCCATAAAGAAGTAGCTGGTGAGATG-GGGAGT---AAAAAAAC-AA-----GCACATAGAAATCCTCTTATTTCATATA--AGAG----TTCAATTTTACTCCCAGATTTGATAATCCAAAAATTATACACTGATAAATATATCTGTTCTAAATGTTAACA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACtggaggttcatgatgcatattaaaataagaaaggc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000683 276 + 135778131 AATGGGTGAAAAGAGAAAAGTTCCATGAAGTGGGATAACTGTCATCCATAAAGAAGTAGCTGGTGAGATG-GGGAGT--AAAAAAAAC-AA-----GCACATAGAAATCCTCTTATTTCATATA--AGAG----TTAAATTTTATTCCCAGATTTGATAATCCAAAAATTATACACTGATAAATATATCTGCTCTAAATGTTAAGA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACTGGAGGTTCATGATGCATATTAAAATAAGAAAGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770467 275 - 3013352 AATGGATGAAAAGAGAAAAGTTCCATGAAATGGGATAACTGTCATCCATAAAGAAGTAGCTGGTGAGATG-GGGAGT---AAAAAAAC-AA-----GCACATAGAAATCCTCTTATTTCATATA--AGAG----TTCAATTTTACTCCCAGATTTGATAATCCAAAAATTATACACTGATAAATATATCTGTTCTAAATGTTAAGA-----TTCCAACAGGTA---GATCATGTCTCTCAAAATGTGTTGCACATTGCCTCAACtggaggttcatgatgcatattaaaataagaaaggc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999477 275 + 8656713 AATGGATGAAAAGAGAAAAGTTCCATCAAGTGGGATAACTGTCATCCATAAAGAAGTAGCTGGTGAGATG-GGGAGT---AAAAAAAC-AA-----GCATATAAAAATCCTCTTATTTCATATA--AGAG----CTCAATTTTATTCCCAGATTTGATAATCCAAAAATTATACACTGATAAATATATCTGTGCTAAATGTTAAGA-----TTCCAACAGGTA---GATTATGTCTCTCAAAATGTGCCGCACATTGCCTCAACtggaggttcatgatgcatattaaaataagaaaggc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129428813 269 - 190850796 AATGGATGAAAAGAGAAAAATTCCATCAAGCAGG----CTGTTATCCATAAAGAAGTAGCAGGTGACCTCAGGGAGT---AAA------AA-------ACATACAAATCCTCTTATTTTATATA--ATAAAATCCTCAATTTTATTCCCAGCTTTGATAATCCAATACTTATACACTGATAAATACATATGTTCTGAATGTTAAAA-----TTTCAACAGGTA---GATGATGTCTTTCAAAATTTGTTGGCCATTGCCTTAGCTAGAGGTTCATGATGTATATTAAAATAAGAGAGGC i calJac3.chr3 C 0 I 10192 s saiBol1.JH378129 6513433 279 - 25294431 AATGGATGAAAAGGGAAAAATTCCATCAAGCACGATAACTGTTATCCATAAAGAGGTAGCAGGTGACCTCGGGGAAT---AAAAAAACCAA-------ATATACAAATCCTTTTATTTTATATA--ATAAAAGCCTCAATTTTATTCCCAGCTTTGATAATCCAATAATTATACACTGATAAATATATCTGTTCTGACTGTTAAAA-----TTCCAACAGGTA---GATGATGTCTTACAAAATGTGTTGGACATTGCCTCAACTAGAGGTTCATGACGTATATTAAAATAAGAGAGGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4068099 277 - 6311556 AATGGATTAAAAGAGAAAAATTCCATCAAGCAGGATAACTGTTATCCATAAAGAAGTAGCAGGAAACCTC-GGGAGT---AAAAAAAC-AA-------ACATACAAATCCTCTTATTTTATATA--ATAAAATCCTCACTTTTATTCCCAGCTTTGATAATCCAATAATTATACACTGATAAATATATCTGTTCTGAATGTTAAAA-----TTCCAACAGGTT---GATGATGTCTTTCAAAATGTGTTGGCCATTGCCTCAACTAGAGGTTCATGATGTATATTAAAATAAGAGAGGC i cebCap1.NW_016107420v1 I 528 C 0 s aotNan1.NW_018507635v1 14923699 278 + 15034901 AATGGATGAAAAGAGAAAAATTCCATCAAGCAGGATAACTGTTATCCATAAAGAAGTAGCAGGTGACCTCAGGGAGT---AAAAAAAC-AA-------ACATACAAATCCTCTTATTTTATATA--ATAAAATCCTCAATTTTATTCCCAGCTTTGATAATCCAGTAATTATACACTGATAAATATAATTGTTCTGAATGTTAAAA-----TTCCAACAGGTA---GATGTTATCTTTCAAAACGTCTTGGACATTGCCTCAACTAGAGGTTCATGATGTATATTAAAATAAGAGAGGC i aotNan1.NW_018507635v1 I 529 C 0 s otoGar3.GL873702 945983 273 - 3201129 AACAGATAAAAAACCAAA---TACACCCAGCTGGTTA------ATTCCTTAAGAAGTAGCAGGTAAGAT--GGGAGTGTAAGAGAAAT-AA-----ACATACCCATTTCCAAATATTTTATGTA--AGAG----CACAATTTTATTACCAGATTTGATAATAGGAAAAATATATACTGCCAAATATATCTTTTCTAAACTTCAAGAACCCTTCCCAAAAGTTA---GATTTCATATCTCACAGTGTGTTGTACACTGCCTCAACTACGgattcatgctgcatattaaaataagaaagac i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1765297 252 + 5974691 ---aaacaaacaaataaaAAT----------------------ATCTCTAAAGAAGTAGAATGTGAGA---GAGAGT---AATAGGAA-AATTTTAACCTGTTCAAATTCCCTTGTTTTATATA--AGTG----CTAAATTTTATTCCTGGCTTTTATAATCAGaaaattatata-tgataaatatattt--tttaaatttaaaGA-----TTCCCACATATACATTATTATATCTTTCCCAGTAT-TTGTATACTGCTTCAAGTTgagattcccaaagtatattagtatacaacaggt i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I a score=86113.000000 s hg38.chr9_KI270719v1_random 50385 8 + 176845 ttagagaa s panTro5.chr4 135075196 8 + 194502333 ttagagaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55554 8 - 70559 ttagagaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90469195 8 - 115148730 ttagagaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131411377 8 + 190429646 ttagagaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930384 8 + 189454096 TTAGAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922054 8 - 40319822 ttagagaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476093 8 - 9219162 ttagagaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000959 8 + 135778131 TTAGAGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770742 8 - 3013352 ttagagaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999752 8 + 8656713 ttagagaa i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6513712 8 - 25294431 TTAGAGAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4068376 8 - 6311556 TTAGAGAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14923977 8 + 15034901 TTAGAGAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 946256 8 - 3201129 ttggagaa i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1765549 8 + 5974691 ttggagaa i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 9695895 0 + 53741614 I e calJac3.chr3 129429082 10192 - 190850796 I a score=755911.000000 s hg38.chr9_KI270719v1_random 50393 96 + 176845 ttcttacagcaaggaaaacaatgtaagtttatttaatttagtgtttTAGCTACATATTTAATAATTATTTTAGGTAG-GCAGTTGTTTAAAGACAAT s panTro5.chr4 135075204 96 + 194502333 ttcttacagcaaggaaaacaatgtaagtttatttaatttagtgtttTAGCTATATATTTAATAATTATTTTAGGTAG-GCAGTTGTTTAAAGACAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55562 96 - 70559 ttcttacagcaaggaaaacaatgtaagtttatttaatttagtgtttTAGCTATATATTTAATAATTATTTTAGGTAG-GCAGTTGTTTAAAGACAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90469203 96 - 115148730 ttcttacagcaaggaaaacaatgtaagtttatttaatttagtgtttTAGCTATATATTTAGTAATTATTTTAGGTAG-CCAGTTGTTTAAAGACAAT i nomLeu3.chr7b C 0 I 165 s rheMac8.chr5 131411385 94 + 190429646 ttcttaccgcaaggaaaacaatgcacatttatttaatttagtgttttagct--atatttgatcaTTATTTTGGCTAG-GTGGTAGTTTGAAGACAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930392 94 + 189454096 TTCTTACCGCAAGGAAAACAATGCACATTTATTTAATTTAGTGTTTTAGCT--ATATTTGATCATTATTTTGGCTAG-GTGGTAGTTTGAAGACAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922062 94 - 40319822 ttcttaccgcaaggaaaacaatgcacatttatttaatttagtgttttagct--gtatttgatcaTTATTTTGGCTAG-GTGGTAGTTTGAAGACAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476101 94 - 9219162 ttcttacctcaaggaaaacaatgcacatttatttaatttagtgttttagct--atatttgatcaTTATTTTGGCTAG-GTGGTAGTTTGAAGACAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79000967 94 + 135778131 TTCTTACCACAAGGAAAACAATGCACATTTATTTAATTTAGTGTTTTAGCT--ATATTTGATCATTATTTTAGCTAG-GTGGCAGTTTGAAGACAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770750 94 - 3013352 ttcttacctcaaggaaaacaatgcacatttatttaatttagtgttttagct--atatttgatcaTTGTTTTGGCTAG-GTGGTAGTTTGAAGACAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999760 94 + 8656713 ttcttaccgcaaggaaaacaatgtacatttatttaatttagtgttttagct--atatttgatcaTTATTTTGGGTAG-GTGGTAGTTTGAAGACAAT i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6513720 96 - 25294431 CTCTTACAGCAAGGAAAGCAATGTAAGTTTATTTAATTCAGTGTTTTAGCTACATATTTGATCCTTATTTTAGTAAG-GTGGTTGTTTGAAAACAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4068384 96 - 6311556 TTCTTACAGCAAGGAAAACAATTTAAGTTTATTTAATTCAGTGTTTTAGCTATATATTTGATCCCTATTTTAGACAG-GTGGTTGTTTGAAAACAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14923985 96 + 15034901 TTCTTACAGCAAGGATAATAATATAAGCTTATTTAATTCAGTGTTTTAGCTATATATTTGATCCTTATTTTAGACAG-GTGGTTGTTTGAAAACAAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 946264 96 - 3201129 tgcttat-gcagggaaaacaatttaagtttatttaatccagtgttttagcaatgtatttcatcaTTATTTTTGTTAGAGTTATTGGTTGGAACCAGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44050787 89 - 53741614 ttttttaaataaagaaaaCAATTTAAATGT-TTTAATCTAGTGTGTTAGCAATGTCTTTGA-------CTTAATTGGTGTTATTGGTTGAAAACAAT i canFam3.chr19 I 5478 C 0 s dasNov3.JH569232 1765557 91 + 5974691 ttcttgcagtgaggaa------gcagtttaactttattcaTTATTGTAGCAATGGGGTTGATCTTTATTTTTGTTAGTTTTATTGGTTAAAAACTAG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e calJac3.chr3 129429082 10192 - 190850796 I a score=2875603.000000 s hg38.chr9_KI270719v1_random 50489 338 + 176845 AGAAATTACTTGGA---ATTTAAAGCAAGC-AAAAATGAATGTGTTGGAAAAGCACAACGCA----GCTCTTAGAATTGAA-----------------AAAAAAGTAGGTGAACCAGGCTCAGGCAGGAATCAGAGAGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGTGGCTATTGTCCTGTCAGTC------A-------TGACCGCTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCATTTTCTGGAATGCTGCTGGGCTCTGCTTTAGCTTGTCA------CTTCCCACTTTA-------------CCATTGGATTCCAAAAATCTATCCATCCGACAGGAATAATTTCAGACTCTCTGCCTACTTCTTACC-TTGCAAG s panTro5.chr4 135075300 323 + 194502333 AGAAATTACTTGGA---ATTTAAAGCAAGC-AAAAATGAATGCGTTGGAAAAGCACAACACA----GCTCTTTTA-TTGAC-----------------AAAAAAGTAGGTGAACCAGGCTCAG-----------AGAGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGTGGCTATTGTCCTGTCAGTC------A-------TGACCGCTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCATTTTCCGGAATGCTG---GGCTCTGCTTTAGCTTGTCA------CTTCCCACTTTA-------------CCATTGGATTCCAAAAACCTATCCATCTGACAGGAATAATTTCAGACTCTCTGCCTACTTCTTACC-TTGCAAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55658 337 - 70559 AGAAATTACTTGGA---ATTTAAAGCAAGC-AAAAATGAATGCGTTGGAAAAGCACAACGCA----GCTCTTAGAATTGA------------------AAAAAAGTAGGTGAACCAGGCTCAGGCAGGAATCAGAGAGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGTGGCTATTGTCCTGTCAGTC------A-------TGACCGCTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCATTTTCTGGAATGCTGCTGGGCTCTGCTTTAGCTTGTCA------CTTCCCACTTTA-------------CCATTGGATTCCAAAAATCTATCCATCTGACAGGAATAATTTCAGACTCTCTGCCTACTTCTTACC-TTGCAAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90469464 338 - 115148730 AGAAATTACTTGGA---ATTTAAAGCAAGC-AAAAATGAATGCGTCGGAAAAGCACAACACA----GCTCTTAGAATTGAC-----------------AAAAAAGTAGGTGAACCAGGCTCAGGCAGGAATCAGAGGGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGAGGCTATTGTCCTGTCAGTC------A-------TGACCGCTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCATTTTCCGGAATGCTGCTGGTCTCTGCTTTAGCTTGTCA------CTTCCTGCTTTA-------------CCACTGGATTCCAAAAATCTATCCATCTGACAGGAATAATTTCAGACTCTCTGCCTACATCTTACC-TTGCAAG i nomLeu3.chr7b I 165 C 0 s rheMac8.chr5 131411479 338 + 190429646 ATAAATTACTAGGA---ATTTTAATCAAGCAAAAAATGAATGCACTGGAAAAGCACAACACA----GCTCTTAGAATTGAC-----------------AAAAAAGCAGGTGAACCAGGCTAAGGCGGGAATTAGAGAGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGCGGCTGCTGTCCTGTCAATC------A-------TGACCACTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCACTTTCCAGAATGCTGCTGGGCTCTGC-TTAACTTGTCA------CTTCCTGCTTTA-------------CCACTGGATTCCAAAAATCTGTCCGTCTGACAGGAATAATTTCAGACTCTGTGCCTACTTTTTACC-TTGAAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930486 338 + 189454096 ATAAATTACTAGGA---ATTTTAATCAAGCAAAAAATGAATGCACTGGAAAAGCACAACACA----GCTCTTAGAATTGAC-----------------AAAAAAGCAGGTGAACCAGGCTAAGGCGGGAATTAGAGAGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGCGGCTGCTGTCCTGTCAATC------A-------TGACCACTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCACTTTCCAGAATGCTGCTGGGCTCTGC-TTAACTTGTCA------CTTCCTGCTTTA-------------CCACTGGATTCCAAAAATCTGTCCGTCTGACAGGAATAATTTCAGACTCTGTGCCTACTTTTTACC-TTGAAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922156 338 - 40319822 ATAAATTACTAGGA---ATTTTAATCAAGCAAAAAATGAATGCACTGGAAAAGCACAACACA----GCTCTTAGAATTGAC-----------------AAAAAAGCAGGTGAACCAGGCTAAGGCGGGAATTAGAGAGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGCGGCTGCTGTCCTGTCAATC------A-------TGACCACTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCACTTTCCAGAATGCTGCTGGGCTCTGC-TTAACTTGTCA------CTTCCTGCTTTA-------------CCACTGGATTCCAAAAATCTGTCCGTCTGACAGGAATAATTTCAGACTCTGTGCCTACTTTTTACC-TTGAAAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476195 338 - 9219162 ATAAATTACTAGGA---ATTTTAATCAAGCAAAAAATGAATGCACTGGAAAAGCACAACACA----GCTCTTAGAATTGAC-----------------AAAAAAGCAGGTGAACCAGGCTAAGGCAGGAATTAGAGAGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGTGGCTGCTGTCCTGTCAATC------A-------TGACCACTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCACTTTCCAGAATGCTGCTGGGCTCTGC-TTAACTTGTCA------CTTCCTGCTTTA-------------CCGCTGGATTCCAAAAATCTGTCTGTCTGACAGGAATAATTTCAGACTCTGTGCCTACTTTTTACC-TTGAAAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79001061 338 + 135778131 ATAAATTACTAGGA---ATTTTAATCAAGCAAAAAATGAATGCACTGGAAAAGCACAACACA----GCTCTTAGAATTGAC-----------------AAAAAAGCAGGTGAACCAGGCTAAGGCAGGAATTAGAGAGCAAGTCAGAACGAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGTGGCTGCTGTCCTGTCAATC------A-------TGACCACTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCACTTTCCAGAATGCTACTGAGCTCTGC-TTAACTTGTCA------CTTCCTGCTTTA-------------CCACTGGATTCCAAAAATCTATCCGTCTGACAGGAATAATTTCAGACTCTGTGCCTACTTCTTACC-TTGAAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2770844 338 - 3013352 ACAAATTACTAGGA---ATTTTAATCAAGCAAAAAATGAATGCACTGGAAAAGCACAACACA----GCTCTTAGAATTGAC-----------------AAAAAAGCAGGTGAACCAGGCTAAGGCAGGAATTAGAGAGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGTGGCTGCTGTCCTGTCAATC------A-------TGACCACTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCACTTTCCAGAATGCTGCTGGGCTCTGC-TTAATTTGTCA------CTTCCTGCTTTA-------------TCACTGGATTCCAAAAATCTGTCCGTCTGACAGGAATAATTTCAGACTCTGTGCCTACTTTTTACC-TTGAAAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 5999854 338 + 8656713 ATAAATTACTAGGA---ATTTTAATCAAGCAAAAAATGAATGTATTGGAAAAGCACAGCACA----GCTCTTGGAATTGAC-----------------AAAAAAACAAGTGAGCCAGGCTAAGGCAGGAATTAGAGAGCAAGTCAGAACCAATATCAGAAAAAGGAAGT---TCTGCTTTTCATGTGACTGCTGTCTTGTCAATC------A-------TGACCACTGGC--------------CACTGCCAGCAAA---GCATGCAC-AGGCACTTTCCGGAATGCTGCTGGGCTCTGC-TTAACTTGTCA------CTTCCTGCTTTA-------------CCACTGGATTCCAAAAATCTATCCGTCTGACAGGAATAATTTCAGACTCTGTGCCTACTTCTTACC-TTGCAAG i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6513816 327 - 25294431 AGAAATTACTTGAA---ATTTTAAGCAAGC-AAAAATGAATGCATAGGAAAAGCACAAGACA----GCTCTTAGAATTGAC----------------AAAAAAAGCAGGAGAACTAGGCACAGGCAGGAATCAGAGAGCAAGTCAGAACCAATATCAAGAAAAGGAAGT---TCTG-TTTCCATGCAGCTGCTGTCCTGTCAGTC------A-------TGACCA------------------------CCAGCATA---GCAC-CAC-AGGCATTTTCTGGAATGCTGCTGAGCTCTGCTTTAGTTTGTCA------CTTGCTGCTTTA-------------CCACTGGATTCCAAAAATCTATCCAACTGACAAGAATAATTTCAGACTCTGTGTCTACTTCTTACC-TTGCAAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4068480 337 - 6311556 AGAAATTACTTGAA---ATTTTAAGCAAGC-AAAAATGAATGCATTGGAAAAGCACAAGACA----GCTCGTAAAATTGAC-----------------AAAAAAGCAGGGGAACTAGGCACAGGCAGGAATCAGAGATCAAGTCAGAACCAATACCAGAGAAAGGAAGT---TCTG-TTTTCATGCAGCTGCTGTCCTGTCAGTC------A-------TGACCACTGGC--------------CACTGCCAGCATA---GCATACAG-AGGCATTTTCTGGAATGCTGCTGGGCGCTGCTTTAGCTTGTCA------CTTGCTTCTTTA-------------CCACTGGATTCCAAAAATCTATCCATCTGACAAGAATAATTTCATACTCCATGCCTACTTCTTATC-TTGCAAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14924081 338 + 15034901 AGAAATTACTTGAA---ATTTTAAACAAGC-AAAAATGAATGCATTGGAAAAGCACAAGACA----GCTCGTAGAATTGAC-----------------AAAAAAGCAGGAGAACTAGGCACAGGCAGGAATTAGAGAGCAAATCAGAACCAATATCAGAAAAAGGAAGT---TCTGTTTTTCATGCAGCTGCTATCCTGTCAGTC------A-------TGACCACTGGC--------------CACTGCCAGCATA---GCATGCAC-AGGCATTTTCTGGAATGCTGCTGGGTTCTGCTTTAGCGTGTCA------CTTGCTGCTTTA-------------CCACTGGATTCCAAAAATCTATCCATCTGACAAGAATAATTTCAGACTCTGTGCCTACTTCCTACC-TTGCAAG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 946360 327 - 3201129 AGAAATAACATGTA---ATTTTAAGCAAGT--GAAATGAATATACTGGAAAAGCACAAAACA----GCTGTTGGAATTGTC---------------CAAGAAAAGTAGG------AAGCTCAGGAAGG----AGAGAGCAAGTCAGAGTCAGTATCAGAAAAGTAA----------TCTTTGGTGTGGCCTCTGGCCTGCTAGCCACTGCAA-------CTGCCACTGGC--------------CAGTGCCAGATCT---CCGTGCAT-AGGCATTTCTGGGAGTGCTACTGAGCTCTGCTTCATCTTGGCA------CTTGCTGGTTTA-------------ACACTGGTGTCCAAGAGTCTCTC-AGCTGATATAAATAATTTCAGATTCTGTACCAATTTCTTACC-CCAGAAG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44050876 350 - 53741614 AGAAAT-ATTTATA---GTAT-AAGCAAGC-AAAAATAGATCTACTGGAAAGGCAAAAAAAAAATGGCTCTTAGAGTTGAC---------------CAAAAAAAGGAGGAGAATTAGGGTCAGACAGGAGGCAGAGGGCAACTCAAATCAGACCTCGGGAAAAGGAAGGAGATCTG-TTTTGATGTGGCCTTTGGCCCTTCAGCC------ACCGCCCCTTGCCACTGGC--------------CATCACCAGTGTA---GCATGGGC-ATGCATTGCCACTAAGGCTCCTGGGCTCTTCCTTCCCTGGTCA------CTTACTGTTTTA-------------ATTTTGGATTTTAAATATCTGTCTGGTCACCATGAATAATTTCAGACTCTGCACTTATTTTTCACC-TATGGG- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1765648 373 + 5974691 AGAAATTATTTGTAGCTGTTTTA--------AAAAGTAAATGCCTTGGAA----------------ATTCTTAAAATTGACAACAACAACAACAACAAAAAAAAACAGAGAACAAAGGCTCAGGCATGAAACAGAGAGCAAATCAAAGCCAAGATCAGGAAAAGCAGTC---TT---CTTTGATGTAGGCTCAGGCACGTCTGCC------A-------AGGTCCCTGGCCATGTGCCAGTGGACACTGCCAGCACAGTGGCATGCACTGGGCATTTTCAAGAGTGCCATTGGGCTCTGCTTCACCTTATTAATTGCTCTTTCTGCTTCATCTTGTCAGTTGCTCTTTGTAGTTCAGAAATCTATTTGGCTGTCATGAATAATTTCATTCTCTGC-TCTCTTTCTCACCATTGCATG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e calJac3.chr3 129429082 10192 - 190850796 I a score=236141.000000 s hg38.chr9_KI270719v1_random 50827 27 + 176845 GTTAAAAATGCAAGGAATGAGTG--------GCTA s panTro5.chr4 135075623 27 + 194502333 GTTAAAAATGCAAGGAATGAGTG--------GCTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 55995 27 - 70559 GTTAAAAATGCAAGGAATGAGTG--------GCTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90469802 27 - 115148730 GTTAAAAATGCAAGGAATGAGTG--------GCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131411817 35 + 190429646 GTTAAAAATGCAAGGAATGAATGAATGATCAACCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930824 35 + 189454096 GTTAAAAATGCAAGGAATGAATGAATGATCAACCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922494 35 - 40319822 GTTAAAAATGCAAGGAATGAATGAATGATCAACCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476533 35 - 9219162 GTTAAAAATGCAAGGAATGAATGAATGATCAACCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79001399 35 + 135778131 GTTAAAAATGCAAGGAATGAATGAATGATCAACCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2771182 35 - 3013352 GTTAAAAATGCAAGGAATGAATGAATGATCAACCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6000192 35 + 8656713 GTTAAAAATGCAAGGAATGAATGACTGATCAACCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129439274 27 - 190850796 gttAAAAGTGCAAGGAATGAGTG--------GCTA i calJac3.chr3 I 10192 I 8 s saiBol1.JH378129 6514143 27 - 25294431 GTTAAAAGTGCAAGGAATGACTG--------GCTA i saiBol1.JH378129 C 0 I 8 s cebCap1.NW_016107420v1 4068817 27 - 6311556 GTTAAAACTGCAAGGAATGAGTG--------GCTA i cebCap1.NW_016107420v1 C 0 I 8 s aotNan1.NW_018507635v1 14924419 27 + 15034901 GTTAAAAGTGCAAGGAAAGAGTG--------GCTA i aotNan1.NW_018507635v1 C 0 I 532 s otoGar3.GL873702 946687 27 - 3201129 GTTAAAAGTGCCAGGTATGAGAA--------GCTA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44051226 27 - 53741614 AAAAAAAATCCCAGAAATGAGGC--------ACTA i canFam3.chr19 C 0 I 8 s dasNov3.JH569232 1766021 34 + 5974691 -CAGGAATTTGCAGGAGGGAGAGATTAATCAGTCA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=339014.000000 s hg38.chr9_KI270719v1_random 50854 37 + 176845 TT--------CTTGGGTCTCTGGTTTACATTTTAGCCTCCAGGTG s panTro5.chr4 135075650 37 + 194502333 TT--------CTTGGGTCTCTGGTTTACATTTTAGCCTCCAGGTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56022 37 - 70559 TT--------CTTGGGTCTCTGGTTTACATTTTAGCCTCCAGTTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90469829 37 - 115148730 TT--------CTTGGGTCTCTGGTTTACATTTTAGCCTCCAGGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131411852 37 + 190429646 TT--------CTTGAGTCTCTGGTTTACATTTTAGCCTCCAGGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930859 37 + 189454096 TT--------CTTGAGTCTCTGGTTTACATTTTAGCCTCCAGGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922529 37 - 40319822 TT--------CTTGAGTCTCTGGTTTACATTTTAGCCTCCAGGTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476568 37 - 9219162 TT--------CTTGAGTCTCTGGTTTATATTTTAGCCTCCAGGTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79001434 37 + 135778131 TT--------CTTGAGTCTCTGGTTTACATTTTAGCCTCCAGGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2771217 37 - 3013352 TT--------CTTGAGTCTCTGGTTTATATTTTAGCCTCCAGGTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6000227 37 + 8656713 TT--------CTTGAGTCTCTGGTTTACATTTTAGCTTCCAGGTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129439309 36 - 190850796 TT--------CTTGACTCTCTGGTTTACATTTCAGCCT-TAGGTG i calJac3.chr3 I 8 I 493 s saiBol1.JH378129 6514178 35 - 25294431 TT--------CTTGA--CTCTGGTTTACATTTCAGCCTCTAGGTG i saiBol1.JH378129 I 8 I 489 s cebCap1.NW_016107420v1 4068852 37 - 6311556 TT--------CTTGACTCTCTGGTTTACATTTCAGCCTCTAGGTG i cebCap1.NW_016107420v1 I 8 C 0 s otoGar3.GL873702 946714 45 - 3201129 TTGAACCAGGCTTGAGTATCTGGTTCATGTGTTAGCACCTGGGTT i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 44051261 35 - 53741614 TA--------TTTAAG--TCTGTTTCACAATTTAACCTCCAGGTG i canFam3.chr19 I 8 C 0 s dasNov3.JH569232 1766055 37 + 5974691 GT--------CTCAAGTCTCAGGTCCAAATTTTAAACTCCAGATG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e aotNan1.NW_018507635v1 14924446 532 + 15034901 I a score=13073.000000 s hg38.chr9_KI270719v1_random 50891 1 + 176845 G s panTro5.chr4 135075687 1 + 194502333 G i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56059 1 - 70559 G i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90469866 1 - 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131411889 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930896 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922566 1 - 40319822 G i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476605 1 - 9219162 G i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79001471 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2771254 1 - 3013352 G i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6000264 1 + 8656713 G i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129439838 1 - 190850796 G i calJac3.chr3 I 493 C 0 s saiBol1.JH378129 6514702 1 - 25294431 G i saiBol1.JH378129 I 489 C 0 s cebCap1.NW_016107420v1 4068889 1 - 6311556 G i cebCap1.NW_016107420v1 C 0 I 492 s aotNan1.NW_018507635v1 14924978 1 + 15034901 G i aotNan1.NW_018507635v1 I 532 C 0 s otoGar3.GL873702 946762 1 - 3201129 G i otoGar3.GL873702 I 3 C 0 s canFam3.chr19 44051296 1 - 53741614 A i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1766092 1 + 5974691 G i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=825740.000000 s hg38.chr9_KI270719v1_random 50892 76 + 176845 TGGGAAGAGAAAAATCTACTCACAAACAGCTTCA-AAACGGAAAGGTCCTATATTGGCATTCCTACA--TAAAAGAAAG s panTro5.chr4 135075688 76 + 194502333 TGGGAAGAGAAAAATCTACTCACAAACAGCTTCA-AAATGGAAAGGTCCTATATTGGCATTCCTACA--TAAAAGAAAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56060 76 - 70559 TGGGAAGAGAAAAATCTACTCACAAACAGCTTCA-AAACGGAAAGGTCCTATATTGGCATTCCTACA--TAAAAGAAAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90469867 76 - 115148730 TGGGAAGAGAAAAATCTACTCACAAACAGCTTCA-AAATGGAAAGGTCCTATATTGGCATTCCTACA--TAAAAGAAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131411890 76 + 190429646 TGGGAGGAGAAAAATCTACTCACAAACAACTTCA-AAATGGAAAGGTCCTATATTGGCTTTCCCACA--TAAAAGAAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930897 76 + 189454096 TGGGAGGAGAAAAATCTACTCACAAACAACTTCA-AAATGGAAAGGTCCTATATTGGCTTTCCCACA--TAAAAGAAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922567 76 - 40319822 TGGGAGGAGAAAAATCTACTCACAAACAACTTCA-AAATGGAAAGGTCCTATATTGGCTTTCCCACA--TAAAAGAAAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476606 76 - 9219162 TGGGAGGAGAAAAATCTACTCACAAACAACTTCA-AAATGGAAAGGTCCTATATTGGCTTTCCCACA--TAAAAGAAAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79001472 76 + 135778131 TGGGAGGAGAAAAATCTACTCACAAACAGCTTCA-AAATGGAAAGGTCCTATATTGACTTTCCCACA--TAAAAGAAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2771255 76 - 3013352 TGGGAGGAGAAAAATCTACTCACAAACAACTTCA-AAATGGAAAGGTCCTATATTGGCTTTCCCACA--TAAAAGAAAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6000265 76 + 8656713 TGGGAGGAGAAAAATCTACTCACAATCAGCTTCA-AAATGGAAAGGTCCTATATTGGCTTTCCCACA--TAAAAGAAAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129439839 76 - 190850796 TGGGAAGAGAAAAATCTACTCACAAACAGATTCA-AAATGGAAAGTTCCTATACTGGCATTCCTACG--TAAAAGGAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6514703 75 - 25294431 TGGGAAGAGAAAAGTCTACTCACAAACGGCTTCA-AAATGGAAAGTTCCTATGTTGGCA-TCCTACA--TGAAAGGAAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4069382 76 - 6311556 TGGGAAGAGAAAAATCTACTCACAAACAGCTTCA-AAATGGAAAGTTCCTATATTGGCATTCCTACA--TAAAAGGAAG i cebCap1.NW_016107420v1 I 492 C 0 s aotNan1.NW_018507635v1 14924979 76 + 15034901 TGGGAAGAGAAAAATCTACTCACAAACAGCTTCA-AAATGGGAAGCTCCTATATTGGCATTCCTACA--TAAAAGGAAG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 946763 78 - 3201129 GAGGAGGAGGAAAATCTATTCAGCAACAGCTTCA-AAATGGGAAGACTCTATCTTGAAATCCCTACATTTAAAAACAAG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44051297 74 - 53741614 --TAGAGAGGGAAATCTATTCACAAAGATCTTTG-AAATTGGAAGGCTCTATAGGGGGATTCCTAAA--TAAAAGGAAG i canFam3.chr19 C 0 I 2481 s dasNov3.JH569232 1766093 72 + 5974691 ---TGAGAGGAAAGTCTACTTGCAAATA--TTCAGAAATGGGAGCACCCTGAATTGGTATTTCTGCA--TAAAAACAAG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=550978.000000 s hg38.chr9_KI270719v1_random 50968 57 + 176845 TACTGGGGGGCTTGACAAATGGAC--ATT------TGCCTTCAAAGAACACATATTCTCCTTTAG s panTro5.chr4 135075764 57 + 194502333 TACTGGGGAGCTTGACAAATGGAC--ATT------TGTCTTCAAAGAACACATATTCTCCTTTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56136 57 - 70559 TACTGGGGGGCTTGACAAATGGAC--ATT------TGTCTTCAAAGAACACATATTCTCCTTTAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90469943 57 - 115148730 TACTGGGGAGCTTGACAAATGAAC--ATT------CGTCTTCAAAGAACACATATTCTCCTTTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131411966 57 + 190429646 TACTGGGGAGCTTGACAAATGGAC--ATT------TGTCTTCAAAGAACACATATTCTCCTCTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130930973 57 + 189454096 TACTGGGGAGCTTGACAAATGGAC--ATT------TGTCTTCAAAGAACACATATTCTCCTCTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922643 57 - 40319822 TACTGGGGAGCTTGACAAATGGAC--ATT------TGTCTTCAAAGAACACATATTCTCCTCTAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476682 57 - 9219162 TACTGGGGAGCTTGACAAATGGAC--ATT------TGTCTTCAAAGAACACATATTCTCCTCTAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79001548 57 + 135778131 TACTGGGGAGCTTGACAAATGGAC--ATT------TGTCTTCAAAGAAGACATACTCTCCTTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2771331 57 - 3013352 TACTGGGGAGCTTGACAAATGGAC--ATT------TGTCTTCAAAGAACACATATTCTCCTCTAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6000341 57 + 8656713 TACTGGGGAGCTTGACAAATGGAC--ATT------TGTCTTCAAAGAACACATATTCTCCTTTAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129439915 56 - 190850796 TACT-CGGCGCTTGACAAATGGAC--ATT------TGTCTTCACAGAACACATATtctcctttag i calJac3.chr3 C 0 I 1023 s saiBol1.JH378129 6514778 65 - 25294431 TACTGGGGTGCTGGACAAATGGACAAATTGACAAATGTCTTCaaagaacacatagtctcctttag i saiBol1.JH378129 C 0 I 1121 s cebCap1.NW_016107420v1 4069458 57 - 6311556 TACTGGGGTGCTTCACAAATGGAC--ATT------TGTCTTCaaagaacacatattctcctttag i cebCap1.NW_016107420v1 C 0 I 1073 s aotNan1.NW_018507635v1 14925055 57 + 15034901 TACTGGGGTGCTTGATAAATGGAC--ATT------TGTCTTCaaagaacacatattctcctttag i aotNan1.NW_018507635v1 C 0 I 1039 s otoGar3.GL873702 946841 58 - 3201129 TGTTATGAAGCCCGACAAATGTCC-AACG------TGTTTGGAAAGAAGGCATGTTCTCCTTCAG i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1766165 52 + 5974691 TATTAGGAAATTTGACAAATTCTT--ACT------TGTCCTGAAACAACTCATAT-----TTCAG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44051371 2481 - 53741614 I a score=507843.000000 s hg38.chr9_KI270719v1_random 51025 99 + 176845 ACAAAGTTTGCACTTATATAGCACAATTAACCTACTTCTTATcaatcaataaaatgaagagacaattacagaacaggataaggtgtttgcaaactatgt s panTro5.chr4 135075821 99 + 194502333 ACAAAGTTTGCACTTATATAGCACAATTAACCTACTTCTTATcaatcaataaaatgaagagacaattacagaacaggataagatgtttgcaaactatgt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56193 99 - 70559 ACAAAGTTTGCACTTATATAGCACAATTAACCTACTTCTTATcaatcaataaaacgaagagacaattacagaacaggataaggtgtttgcaaactatgt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470000 97 - 115148730 ACAAAGCTTGCACTTATATAGCACAATTAACCTATTACTTATcaatcaataaaatgaagag--aattacagaacaggataaggtgtttgcaaactatgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412023 99 + 190429646 ACAAAGATTGCACTTATATAGCACAATTAACCTATTTCTTCTcaatcaataaaatgaaaagacaattagaaaacaggataaggtgtttgcaaactatgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130931030 99 + 189454096 ACAAAGATTGCACTTATATAGCACAATTAACCTATTTCTTCTcaatcaataaaatgaagagacaattagaaaacaggataaggtgtttgcaaactatgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922700 99 - 40319822 ACAAAGATTGCACTTATATAGCACAATTAACCTATTTCTTCTcaatcaataaaatgaagagacaattagaaaacaggataaggtgtttgcaaactatgt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476739 99 - 9219162 ACAAAGATTGCACTTATATAGCACAATTAACCTATTTCTTCTcaatcaataaaatgaagagacaattagaaaacaggataaggtgtttgcaagctatgt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79001605 99 + 135778131 ATAAAGATTGCACTTATATAGCACAATTAACCCATTTCTTCTcaatcaataaaatgaagagacaattagagaacaggataaggtgtttgcaaactatgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2771388 99 - 3013352 ACAAAGATTGCACTTATATAGCACAATTAACCTATTTCTTCTcaatcaataaaatgaagagacaattagaaaacaggataaggtgtttgcaaactatgt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6000398 99 + 8656713 ACAAAGCTTGCACTTATATAGCACAATTAACCCATTTCTTCTcaatcaataaaatgaagagacaattagagaacgggataaggtgtttgcaaactatgt i colAng1.NW_012114544v1 C 0 C 0 s otoGar3.GL873702 946899 90 - 3201129 ACAATACCGCCA-----ATAACACAATTAACCTGTTCCTC----atcaataaaaggacgagacgacctgcagaatggagaaagtatttgtaaaatttgc i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1766217 96 + 5974691 ACACATAATTAACCTTACTAACACAATTAAATTATTCCTATAAAACCAAAATGTTAGACAACCAATTCCCAAAGGGAAAAAAATAT---CAAATCATAT i dasNov3.JH569232 C 0 I 6232 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44051371 2481 - 53741614 I e aotNan1.NW_018507635v1 14925112 1039 + 15034901 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I e saiBol1.JH378129 6514843 1121 - 25294431 I e calJac3.chr3 129439971 1023 - 190850796 I a score=2239972.000000 s hg38.chr9_KI270719v1_random 51124 477 + 176845 attcaacaaggttt-aatatccagaatatataaggaactcaaaaaactcaatagcaaaagaaaaagttgattaaaaaatgga------------------------caaaagaagacatacaaatggccaa--aaa---atatataaagaaa-tgctcaacatcattaagcctcagaaaaatgcaaaacaaacccacaatgagctattaccttaccccagtttaaatgatggatattatcaagaagac-aaaatataacaaatggaaacgataatgtggagaaagaggaa-agttatacactgttggtgggaatataaaatagtatagctgttatgaaaagcagcatggagtttccac-aaaaaataaaaaagagaactattatattacccagcaatcccactactgcgtacgtaataaaaaaaaaatgaaattagtatgacaaagagacatctgcacc--cagggatattgaagcatcattcaaaatagccgtgatatggaatctgcctaaa s panTro5.chr4 135075920 465 + 194502333 attcaacaaggttt-aatatccagaatatataaggaactcaaaaaactcaatagcaaaagaaaaagttgattaaaaaatgga------------------------caaaagaagacatacaaatggccaa--aaa---atatataaagaaa-tgctcaacatcattaagcctccgaaaaatgcaaaacaaaaccacaatgagctattaccttaccccagtttaaatgatggatattatcaagaagac-aaaatataacaaatggaagcgataatgtggagaaagaggaa-tgttatacactgttggtgggaatataaaatagtatagctgttatgaaaagcagtatggaggttccac-aaaaaataaaaaagagaactattgtattacccagcaatcccactactgggtacgtaatcaaaaaaaa-tgaaattagtatgtcaaagagacatctgcacc--cagggatattgaagcttcattcaa-----------tatggaatctgcctaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56292 473 - 70559 attcaacaaggttt--atatccagaatatataaggaactcaaaaaactcaatagcaaaagaaaaagttgattaaaaaatgga------------------------caaaagaagacatacaaatggccaa--aaa---atatataaagaaa-tgctcaacatcattaagcctcagaaaaatgcaaaacaaaacc-caatgagctattaccttaccccagtttaaatgatggatattatcaagaagac-aaaatataacaaatggaaacgataatgtggagaaagaggaa-tgttatacactgttggtgggaatataaaatagtatagctgttatgaaaagcagtatggaggttccac-aaaaaataaaaaagagaactattatattacccagcaatcccactactgggtacgtaatcaaaaaaaa-tgaaattagtatgtcaaagagacatctgcacc--cagggatattgaagcatcattcaa-atagccgtgatatggaatctgcctaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470097 475 - 115148730 attcaacaagtttt-aatattcggaatatataaggaactcaaaaaactcaataacaaaagaaaaaattgattaaaaaatgga------------------------caaaagaagacatgcaaattgccaa--aaa---atgtataaagaaa-tgctcaacatcattaagcctcagaaaaatgcaaaataaaaccacaatgagatattaccttaccccagtttaaatgatggatattatcaagaagac-aaaatttaacaaactgaaacaataatgtggagaaagaggaa-tcttacacactgttggtgggaatataaaatagtatagctgttatgaaaaacaatatggagattccac-aaaaaataaaaaagagaactattatattacccagcaatcccactactgggtacgtaat-aaaaaaaa-tgaaattagtatgtcaaagagacatctgcacc--catggatattgaagcatcattcaaaatagccatgatatggaatctgcctaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412122 478 + 190429646 atttaacaaggttt-aatatccagaatatatatggaactcaaaaaactcaatagcaaaagaaaaagttgatttaaaaatgga------------------------caaaggaagacataaaaatggccaaatatatatatatattattaaa-tgttcaacatcattaaccctcagaaaaatgcaaaacaaaaccacaatgtgatattacctcatcccggttta---gatagatattatcaagaagac-aaaatataacaaatggaa-cgataatgtggagaaagaggaa-tcccatacactgctgatgagaatataaaatagtatagccattatgaaaaatagtatggaggttccacaaaaaaataaaaaagagaattattatatgacccagcaatcccactactgggtacgtaatcaaagaaaa-caaaattagtatgtcaaagagatatctgcacc--catggttactgcagcatcattcaaaatagccaagatatggaatcagcctaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130931129 475 + 189454096 atttaacaaggttt-aatatccagaatatatatggaactcaaaaaactcaatagcaaaagaaaaagttgatttaaaaatgga------------------------caaaggaagacatacaaatggccaa--aaatatatatattattaaa-tgttcaacatcattaaccctcagaaaaatgcaaaacaaaaccacaatgtgatattacctcatcccggttta---gatagatattatcaagaagac-aaaatataacaaatggaa-cgataatgtggagaaagaggaa-tcctatacactgctgatgagaatataaaataatatagccattatgaaaaatagtatggaggttccac-aaaaaataaaaaagagaattattatatgacccagcaatcccactactgggtacgtaatcaaagaaaa-caaaattagtatgtcaaagagatatctgcacc--catggttactgcagcatcattcaaaatagccaagatatggaatcagcctaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34922799 475 - 40319822 atttaacaaggttt-aatatccagaatatatatggaactcaaaaaactcaatagcaaaagaaaaagttgatttaaaaatgga------------------------caaaggaagacatacaaatggccaa--aaatatatatattattaaa-tgttcaacatcattaaccctcagaaaaatgcaaaacaaaaccacaatgtgatattacctcatcccggttta---gatagatattatcaagaagac-aaaatataacaaatggaa-cgataatgtggagaaagaggaa-tcctatacactgctgatgagaatgtaaaatagtatagccattatgaaaaatagtatggaggttccac-aaaaaataaaaaagagaattattatatgacccagcaatcccactactgggtacgtaatcaaagaaaa-caaaattagtatgtcaaagagatatctgcacc--catggttactgcagcatcattcaaaatagccaagatatggaatcagcctaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4476838 474 - 9219162 atttaacaaggttt-aatatccagaatatatatggaactcaaaaaactcaataacaaaagaaaaagttgatttaaaaatgga------------------------caaaggaagacatacaaatggccaa--aaatatatatattattaaa-tgttcaacatcattaaccctccgaaaaatgcaaaacaaaaccacaatgtgatattacctcatcctggttta---gatagatattatcaagaagac-aaaatataacaaatggaa-cgataatgtggagaaagaggaa-tcctatacactgttgatgagaatataaaatagtacagccattatg-aaaatagtatggagattccac-aaaaaataaaaaagagaattattatatgacccagcaatcccactactgggtacataatcaaagaaaa-caaaattagtatgtcaaagagatatctgcacc--catggttactgcagcatcattcaaaatagccaagatatggaatcagcttaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79001704 475 + 135778131 atttagcaaggttt-aatatccagaatatatatataactcaaaaaactcaatagcaaaagaaaaagttgatttaaaaatgga------------------------caaaggaacacatacaaatggccaa--aaatatatatattattaaa-tgttcaacatcactaaccctcagaaaaatgcaaaacaaaaccacaatgtgatattacctcatcccggttta---gatagatattatcaagaagac-aaaatataacaaatgaaa-tgataatgtggagaaagaggaa-tcctacacactgttgatgagaatataaaatagtgtcgccattatgaaaaatagtatggaggttccac-aaaaaataaaaaagagaattattatatgacccagcaatcccactactgggtacataatcaaagaaaa-caaaattagtatgtcaaagagatatctgcacc--catggttactgcagcatcattcaaaatagccaagatatggaatcagcctaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2771487 475 - 3013352 atttaacaaggttt-aatatccagaatatatatggaactcaaaaaactcaatagcaaaagaaaaagttgatttaaacatgga------------------------caaaggaagacatacaaatggccaa--aaatatatatattattaaa-tgttcaacatcattaatcctcagaaaaatgcaaaacaaaaccacaatgtgatattacctcatcccggttta---gatagatattatcaagaagac-aaaatataacaaatggaa-cgataatgtggagaaagaggaa-tcctatacactgttgatgagaatataaaatagtatagccattatgaaaaatagtatggagattccac-aaaaaataaaaaagagaattattatatgacccagcaatcccactactgggtacataatcaaagaaaa-caaaattagtatgtcaaagagatatctgcacc--catggttactgcagcatcattcaaaatagccaagatatggaatcagcctaaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6000497 475 + 8656713 atttaacaaggttt-aatatccagaatatatatggaactcaaaaaactcaataacaaaagaaaaagttgatttaaaaatgga------------------------caaaggaagacatacaaatggccaa--aaatatatatattattaaa-tgttcaacatcattaaccctcagaaaaatgcaaaacaaaaccacaatgagatattacctcaccccagttta---aatagatattatcaagaagac-aaaatacaacaaatggaa-cgataatgtggagaaagaggaa-tcctatacactgttgatgggaatataaaagagtatagccattatgaaaaatagtatggaggttccac-aaaaaatgaaagagagaattattatatgacctagcaatcccactactgggtacataatcaaagaaaa-caaaattagtatgtcacagagacatctgcacc--catggttactgcagcatcattcaaaatagccaagatatggaatcagcctaaa i colAng1.NW_012114544v1 C 0 C 0 s otoGar3.GL873702 946989 490 - 3201129 gttggaaaaggggtgaatacacaaaatatacattta---taaacagttcaa-agcttccaaataatcttccttaaaaatgtgcagaatccctaaatagacatttctcaaaagaagacatacaaatgtccaa--tag---atataagaaaaaattgtccatcatcaggaatcatcagagaaatgcaaatcaaaaccacaagaagcgattacctcaacctagttag---aaaggcttttataacaaagacaaaaaaatagcaaatgctgagaaagattcagaaaaaaatgaactctttcatactgttggtgggaacata------tactgccagtatagaaagtagtaggaagtttttta-ctaaattacaaaatagaacaaccatattacccagcaactccactattggatatatttccaaaggaaa-taaaattactatgttgaagagatatctgcacacgcatgtttactgtagcatcatctgcaatgatcaagatatggga---GCCCAAa i otoGar3.GL873702 C 0 I 1891 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1766313 6232 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44051371 2481 - 53741614 I e aotNan1.NW_018507635v1 14925112 1039 + 15034901 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I e saiBol1.JH378129 6514843 1121 - 25294431 I e calJac3.chr3 129439971 1023 - 190850796 I a score=234796.000000 s hg38.chr9_KI270719v1_random 51601 60 + 176845 tactcatctaacaacaaatggataaagaaaatgtggtgtataaatgtatatctatctatc s panTro5.chr4 135076385 52 + 194502333 tgctcatctaacaataaatggataaagaaaatgtggtgtataaat--------atctatc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56765 48 - 70559 tgctcatctaacaacaaatggataaagaaaatgtggtgtataaat------------gta i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470572 60 - 115148730 tgctcatctaacaataaatggataaagaaaatatggtgtatcaatgtatatctatctatc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412600 60 + 190429646 tgctcatgtaacaataaactgataaagaaaatctggtgtataaatgtatatctatctatg i rheMac8.chr5 C 0 I 28 s macFas5.chr5 130931604 60 + 189454096 tgctcatgtaacaataaactgataaagaaaatctggtgtataaatgtatatctatctatg i macFas5.chr5 C 0 I 28 s macNem1.NW_012010911v1 34923274 60 - 40319822 tgctcatgtaacaataaactgataaagaaaatctggtgtataaatgtatatctatctatg i macNem1.NW_012010911v1 C 0 I 153 s cerAty1.NW_012000798v1 4477312 60 - 9219162 tgctcatgtaacaataaactgataaagaaaatctggtgtataaatgtatatctatctatg i cerAty1.NW_012000798v1 C 0 I 12 s chlSab2.chr7 79002179 60 + 135778131 tgctcatgtaacaataaattgataaagaaaatctggtgtataAATGTAtaactatctatg i chlSab2.chr7 C 0 I 60 s manLeu1.NW_012103277v1 2771962 60 - 3013352 tgctcatgtaacaataaactggtaaagaaaatctggtgtataaatgtatatctatctatg i manLeu1.NW_012103277v1 C 0 I 36 s colAng1.NW_012114544v1 6000972 60 + 8656713 tgctcatgtgacaataaattaataaagaaaatctggtgtataaatgtatatctatctacg i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1766313 6232 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44051371 2481 - 53741614 I e otoGar3.GL873702 947479 1891 - 3201129 I e aotNan1.NW_018507635v1 14925112 1039 + 15034901 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I e saiBol1.JH378129 6514843 1121 - 25294431 I e calJac3.chr3 129439971 1023 - 190850796 I a score=81455.000000 s hg38.chr9_KI270719v1_random 51661 17 + 176845 tatctatctatctatct s panTro5.chr4 135076437 17 + 194502333 tatctgtctatctatct i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56813 17 - 70559 tatctatctatctatct i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470632 17 - 115148730 tatctatctatctatct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412688 17 + 190429646 tatctatctatctatct i rheMac8.chr5 I 28 C 0 s macFas5.chr5 130931692 17 + 189454096 tatctatctatctatct i macFas5.chr5 I 28 C 0 s macNem1.NW_012010911v1 34923487 17 - 40319822 tatctatctatctatct i macNem1.NW_012010911v1 I 153 C 0 s cerAty1.NW_012000798v1 4477384 17 - 9219162 tatgtatctatctatct i cerAty1.NW_012000798v1 I 12 C 0 s chlSab2.chr7 79002299 17 + 135778131 tatctatctatctatct i chlSab2.chr7 I 60 C 0 s manLeu1.NW_012103277v1 2772058 17 - 3013352 tatctatctatctatct i manLeu1.NW_012103277v1 I 36 C 0 s colAng1.NW_012114544v1 6001032 17 + 8656713 tatctatatatctatct i colAng1.NW_012114544v1 C 0 I 38 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1766313 6232 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44051371 2481 - 53741614 I e otoGar3.GL873702 947479 1891 - 3201129 I e aotNan1.NW_018507635v1 14925112 1039 + 15034901 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I e saiBol1.JH378129 6514843 1121 - 25294431 I e calJac3.chr3 129439971 1023 - 190850796 I a score=155412.000000 s hg38.chr9_KI270719v1_random 51678 46 + 176845 atctatctatctatc------atctgtc--tatttatcatctatctatccaccc s panTro5.chr4 135076454 45 + 194502333 atctatc-atctatc------atccatc--tatttatcatctatctatccaccc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56830 45 - 70559 atctatc-atctatc------atctatc--tatttatcatctatctatccaccc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470649 52 - 115148730 atctatctatctatctatctaatctacc--tatttatcatctatctatccactc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412705 47 + 190429646 atctatctatctatct-----atctatc--tatatatcatctatctatccaccc i rheMac8.chr5 C 0 I 16 s macFas5.chr5 130931709 47 + 189454096 atctatctatctatct-----atctatc--tatatatcatctatctatccaccc i macFas5.chr5 C 0 I 16 s macNem1.NW_012010911v1 34923504 47 - 40319822 atctatctatctatct-----atctatc--tatctatcatctatctatccaccc i macNem1.NW_012010911v1 C 0 I 16 s cerAty1.NW_012000798v1 4477401 47 - 9219162 atctatctatctatct-----atctatc--tatctatcatctatctatccaccc i cerAty1.NW_012000798v1 C 0 I 17 s chlSab2.chr7 79002316 49 + 135778131 atctatctatctatct-----atctatctatatatatcatctctctatcCACCA i chlSab2.chr7 C 0 I 16 s manLeu1.NW_012103277v1 2772075 47 - 3013352 atctatctatctatct-----atctatc--tatctatcatctatctgtccaccc i manLeu1.NW_012103277v1 C 0 I 16 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1766313 6232 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44051371 2481 - 53741614 I e otoGar3.GL873702 947479 1891 - 3201129 I e aotNan1.NW_018507635v1 14925112 1039 + 15034901 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I e saiBol1.JH378129 6514843 1121 - 25294431 I e calJac3.chr3 129439971 1023 - 190850796 I e colAng1.NW_012114544v1 6001049 38 + 8656713 I a score=615462.000000 s hg38.chr9_KI270719v1_random 51724 132 + 176845 ctcc----------agaacaatattcagccataaaatgctgttatttttagcaatgtggatgaagttggaggacattttgttaagtgaaataagccaggcacagaaagacaagcactgcatgatcaaattcatatctggagt s panTro5.chr4 135076499 142 + 194502333 cccccacacacaccagaacaatattcagccataaaatgctgttatttttagcaatgtggatgaagttggaggacattttgttaagtgaaataagccaggcacagaaagacaagcactgcatgatcaaattcatatctggagt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 56875 132 - 70559 ctcc----------agaacaatattcagccataaaatgctgttatttttagcaatgtggatgaagttggaggacactttgttaggtgaaataagccaggcacagaaagacaagcactgcatgatcaaattcatatctggagt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470701 139 - 115148730 ctcc---acacaccagaacaatattcagccataaaatgctgttatttttagcaatgtggatgaagttggaggacattttgttaagtgaaataagccaggcacagaaagacaaacactgcacgatctcattcgtatctggagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412768 132 + 190429646 ----------caccagaacaatattcagccataaaatactgttatttttagcaacgtggatgaacttggaggacattttgttaagtgaaataagccaggcacagaaagacaagcactgcatgatctcattcatatgtggaGT i rheMac8.chr5 I 16 C 0 s macFas5.chr5 130931772 132 + 189454096 ----------caccagaacaatattcagccataaaatactgttatttttagcaacgtggatgaacttggaggacattttgttaagtgaaataagccaggcacagaaagacaagcactgcatgatctcattcatatgtggagt i macFas5.chr5 I 16 C 0 s macNem1.NW_012010911v1 34923567 132 - 40319822 ----------caccagaacaatattcagccataaaatactgttatttttagcaacgtggatgaacttggaggacattctgttaagtgaaataagccaggcacagaaagacaagcactgcatgatctcattcatatgtggagt i macNem1.NW_012010911v1 I 16 C 0 s cerAty1.NW_012000798v1 4477465 132 - 9219162 ----------caccagaacaatattcagccataaaatactgttatttttagcaatgtggatgaacttggaggacattttgttaagtgaaataagccaggcacagaaagacaagcactgcatgatctcattcatacgtggagt i cerAty1.NW_012000798v1 I 17 C 0 s chlSab2.chr7 79002381 132 + 135778131 ----------caccagaacaatattcagtcataaaatactgttatttttagcaacgtggatgaacttggaggacatgttgttaagtgaaataagccaggcacagaaagacaagcactgcatgatctcattcatatgtggagt i chlSab2.chr7 I 16 C 0 s manLeu1.NW_012103277v1 2772138 132 - 3013352 ----------caccagaacaatattcagctataaaatactgttattttcagcaacgtggatgaacttggaggacattttgttaagtgaaataagccaggcacagaaagacaagcactgcatgatctcattcatatgtggagt i manLeu1.NW_012103277v1 I 16 C 0 s colAng1.NW_012114544v1 6001087 132 + 8656713 ----------caccagaacaatattcagccataaaatactgttatttttagcaaggtggatgaacttggaggacattttgttaagtgaaataagccaggcacagaaagacaagcactgcatgatctcattcatatgtggagt i colAng1.NW_012114544v1 I 38 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1766313 6232 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44051371 2481 - 53741614 I e otoGar3.GL873702 947479 1891 - 3201129 I e aotNan1.NW_018507635v1 14925112 1039 + 15034901 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I e saiBol1.JH378129 6514843 1121 - 25294431 I e calJac3.chr3 129439971 1023 - 190850796 I a score=12012.000000 s hg38.chr9_KI270719v1_random 51856 2 + 176845 tt s panTro5.chr4 135076641 2 + 194502333 tt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57007 2 - 70559 tt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470840 2 - 115148730 tt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412900 2 + 190429646 TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130931904 2 + 189454096 tt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34923699 2 - 40319822 tt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4477597 2 - 9219162 tt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79002513 2 + 135778131 tt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772270 2 - 3013352 tt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001219 2 + 8656713 tt i colAng1.NW_012114544v1 C 0 C 0 s dasNov3.JH569232 1772545 2 + 5974691 TT i dasNov3.JH569232 I 6232 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44051371 2481 - 53741614 I e otoGar3.GL873702 947479 1891 - 3201129 I e aotNan1.NW_018507635v1 14925112 1039 + 15034901 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I e saiBol1.JH378129 6514843 1121 - 25294431 I e calJac3.chr3 129439971 1023 - 190850796 I a score=95963.000000 s hg38.chr9_KI270719v1_random 51858 20 + 176845 ---------TAAGGATATG-GAGAAAGATG s panTro5.chr4 135076643 20 + 194502333 ---------TAAGGATACG-GAGAAAGATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57009 20 - 70559 ---------TAAGGATATG-GAGAAAGATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470842 20 - 115148730 ---------taaagaTATG-GAGAAAGATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412902 20 + 190429646 ---------TAAAGATATG-GGGAAAGATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130931906 20 + 189454096 ---------taaagaTATG-GAGAAAGATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34923701 20 - 40319822 ---------taaagaTATG-GAGAAAGATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4477599 20 - 9219162 ---------taaagaTATG-GAGAAAGATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79002515 20 + 135778131 ---------taaagaTATG-GAGAAAGATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772272 20 - 3013352 ---------taaagaTACG-GAGAAAGATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001221 20 + 8656713 ---------taaagaTATG-GAGAAAGATG i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44053852 21 - 53741614 ---------TAAGTATATACTAGAAAAATA i canFam3.chr19 I 2481 C 0 s dasNov3.JH569232 1772547 20 + 5974691 CATGTGTACCAAGGATAAG-A--------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26328917 1252 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 947479 1891 - 3201129 I e aotNan1.NW_018507635v1 14925112 1039 + 15034901 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I e saiBol1.JH378129 6514843 1121 - 25294431 I e calJac3.chr3 129439971 1023 - 190850796 I a score=30121.000000 s hg38.chr9_KI270719v1_random 51878 6 + 176845 TTAGG-A s panTro5.chr4 135076663 6 + 194502333 TTAGG-T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57029 6 - 70559 TTAGG-T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470862 6 - 115148730 TTAGG-T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412922 6 + 190429646 TTAGG-T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130931926 6 + 189454096 TTAGG-T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34923721 6 - 40319822 TTAGG-T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4477619 7 - 9219162 TTAGGTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79002535 6 + 135778131 TTAGG-T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772292 7 - 3013352 TTAGGTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001241 7 + 8656713 TTAGGTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129440994 6 - 190850796 TTAGT-T i calJac3.chr3 I 1023 C 0 s saiBol1.JH378129 6515964 6 - 25294431 TTAGT-T i saiBol1.JH378129 I 1121 C 0 s micMur3.chr14 26330169 6 - 93316391 TTAGG-T i micMur3.chr14 I 1252 C 0 s canFam3.chr19 44053873 5 - 53741614 TTAGG-- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1772567 5 + 5974691 TTAGG-- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 947479 1891 - 3201129 I e aotNan1.NW_018507635v1 14925112 1039 + 15034901 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I a score=97862.000000 s hg38.chr9_KI270719v1_random 51884 9 + 176845 TTTTTC---CTT s panTro5.chr4 135076669 9 + 194502333 TTTTTC---CTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57035 9 - 70559 TTTTTC---CTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470868 9 - 115148730 TTTTTC---CTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412928 9 + 190429646 TTTTTC---CTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130931932 9 + 189454096 TTTTTC---CTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34923727 9 - 40319822 TTTTTC---CTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4477626 9 - 9219162 TTTTTC---CTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79002541 9 + 135778131 TTTTTC---CTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772299 9 - 3013352 TTTTTC---CTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001248 9 + 8656713 TTTTTC---CTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441000 9 - 190850796 TTTTTC---CTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6515970 9 - 25294431 TTTTTC---CTA i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14926151 9 + 15034901 TTTTTC---CTA i aotNan1.NW_018507635v1 I 1039 C 0 s micMur3.chr14 26330175 9 - 93316391 TTTTTT---CTA i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 949370 12 - 3201129 TTTTTCATACTA i otoGar3.GL873702 I 1891 C 0 s canFam3.chr19 44053878 8 - 53741614 -TTTTT---CTA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1772572 8 + 5974691 -TTTTT---CTA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e cebCap1.NW_016107420v1 4069515 1073 - 6311556 I a score=4802358.000000 s hg38.chr9_KI270719v1_random 51893 418 + 176845 GTGTGGACAATATTTAAAATTATTATATTTGGAGAGATAACTAGAATACT-CCTGCCAACTTAACTATGGCCCATTGAATTGCTCTGAATTATAAATCAGATACTCTGAATTAGCACTTCACTACCATTTTTAAATCTACAGCATTTATGTAAATTAATAACTGCTGTAGAGCATACTACTCATGGCTGAAAA-AAGTGACCTGATGATTAGAGCTATCTAAGACTCACCTGA-TGTCTAACAGCACTAAGGATCAAGCTATCACCTCTCCCTTAACACATCTTTCACACCAGTGTGCTAGAGCAGATAGCTGAAAAGTTTT-CCCTAAGCCAGAGATCATTCTGACAAGGCATATGGAACAATAGAGATGTCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACTTGCTTT s panTro5.chr4 135076678 418 + 194502333 GTGTGGACAATATTTAAAATTATTATATTTGGAGAGATAACTAGAATACT-CCTGCCAACTTAACTATGACCCATTGAATTGCTCTGAATTATAAATCACATACTCTGAATTAGCACTTCACTGCCATTTTTAAATCTACAGCATTTATATAAGTTAATAACTGCTGTAGAGCATACTACTCATGGCTGAAAA-AAGTGACCTGATGATTCGAGCTATCTAAGACCCACCTGA-TGTCTAACAGCACTAAGGATCAAGCTATCACCTCTCCCTTAACACATCTTTCACACCAGTGTGCTACAGCAGATACCTGAAAAGTTTT-CCCTAAGCCAGAGATCATTCTGACAAGGCATATGGAACAATGGAAATGTCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACTTGCTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57044 417 - 70559 GTGTGGACAATATTTAAAATTATTATATTTGGAGAGATAACTAGAATACT-CCTG-CAACTTAACTATGACCCATTGAATTGCTCTGAATTATAAATCAGATACTCTGAATTAGCACTTCACTACCATTTTTAAATCTACAGCATTTATATAAATTAATAACTGCTGTAGAGCATACTACTCATGGCTGAAAA-AAGTGACCTGATGATTCGAGCTATCTAAGACCCACCTGA-TGTCTAACAGCACTAAGGATCAAGCTATCACCTCTCCCTTAACACATCTTTCACACCAGTGTGCTAGAGCAGATAGCTGAAAAGTTTT-CCCTAAGCCAGAGATCATTCTGACAAGGCATATGGAACAATGGAGATGTCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACTTGCTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90470877 418 - 115148730 GTGTGGACAATATTTAAAATTATTATATTTGGAGAGATAACTAGAATACT-CCTGCCAACTTAACTTTGACCCCTTGAATTGCCCTGAATTATAAATCAGATACTCTGAATTAGCACTTCACTACCATTTTTAAATCTACAGCATTTATATAAATTAATAACTGCTGTAGAGCATACTACTCATAGCTGGAAA-AAGTGACCTGATGATTCTAGCTATCTAAGACCCACCTGA-TGTCTAACAGCACTAAGGATCAAGCTATCACCTCTCCCTTAACACGTCTTTCACACCAGTGTGCTAGAGCAGATAGCCGAAAAGTTTT-CCCTAAGCCAGAGATCATTCTGACAAGGCATATGGAACAATGGAAATGTCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACTTGCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131412937 419 + 190429646 GTGTGGACAATATTTAAAATTATTATATTTGGAGAGATAACTAGAATACT-CCTGCCAACTTAACTATGATCCATTAAATTGCTCTTAATTATAAATCAGACACTCTGGATTAGCACTTCACTATCATTTTCAAATCTACAGCATTTATATAAATTAATAACTACTGTAGAGCATACTACTCATGGCTGAAAACAAGTGACCCAATGATTCTAGCTACCTAAGAACCACCTGA-TGTCTAACAGCACTAAGTATCAAGCTATCATCTCTCTCTTAACACATCTTTCACACCAGTGTGCTAGAGCAGATAGCTGAAAAGTTTT-CCCTAAGCCAGAGATCATCCTGACAAGGCATATAGAACAATGGAAATGTCAACATGCTTTCAAGATA------AGTAACAGTAATCCTG--GCTCTTAACATTTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130931941 419 + 189454096 GTGTGGACAATATTTAAAATTATTATATTTGGAGAGATAACTAGAATACT-CCTGCCAACTTAACTATGATCCATTAAATTGCTCTTAATTATAAATCAGACACTCTGGATTAGCACTTCACTATCATTTTCAAATCTACAGCATTTATATAAATTAATAACTACTGTAGAGCATACTACTCATGGCTGAAAACAAGTGACCCAATGATTCTAGCTACCTAAGAACCACCTGA-TGTCTAACAGCACTAAGTATCAAGCTATCATCTCTCTCTTAACACATCTTTCACACCAGTGTGCTAGAGCAGATAGCTGAAAAGTTTT-CCCTAAGCCAGAGATCATCCTGACAAGGCATATGGAACAATGGAAATGTCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACGTTTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34923736 419 - 40319822 GTGTGGACAATATTTAAAATTATTATATTTGGAGAGATAACTAGAATACT-CCTGCCAACTTAACTATGATCCATTAAATTGCTCTTAACTATAAATCAGACACTCTGGATTAGCACTTCACTATCATTTTCAAATCTACAGCATTTATATAAATTAATAACTACTGTAGAGCATACTACTCATGGCTGAAAACAAGTGACCCAATGATTCTAGCTACCTAAGAACCACCTGA-TGTCTAACAGCACTAAGTATCAAGCTATCATCTCTCTCTTAACACATCTTTCACACCAGTGTGCTAGAGCAGATAGCTGAAAAGTTTT-CCCTAAGCCAGAGATCATCCTGACAAGGCATATGGAACAATGGAAATGTCAACATGCTTTCAAGACA------AGTAACAGTAATCCTA--GCTCTTAACATTTTTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4477635 419 - 9219162 GTGTGGACAATATTTAAAATTATTGTATTTGGAGAGATAACTAGAATACT-CCTGTCAACTTAACTATGATCCATTAAATTGCTCTTAATTATAAATCAGACACTCTGGATTAGCACTTCACTATCATTTTCAGATCTACAGCATTTATATAAATTAATAACTACTGTAGAGCATACTACTCATGGCTGAAAACAAGTGACCCGATGATTCTAGCTACCTAAGAACCACCTGA-TGTCTAACAGCACTAAGTATCAAGCTATCATCTCTCTCTTAACACATCTTTCACACCAGTGTGCTAGAGCAGATAGCTGAAAAGTTTT-CCCTAAGCCAGAGATCATCCTGACAAGGCATATGGAACAATGGAAATGTCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACATTTTTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79002550 419 + 135778131 GTGTGGACAATATTTTAAATTATTATATTTGGAGAAATAACTAGAATACT-CCTGCCAACTTAACTATGATCCATTAAATTGCTCTTAATTATAAATCAGACACTCTGGATTAGCACTTCACTATCATTTTCAAATCTACAGCATTTATATAAATTAATAACTACTGTAGAGCATACTACTCATGGCTGAAAACAAGTGATCCGATGATTCTAGCTACCTAAGAACCACCTGA-TGTCTAACAGCACTAAGTATCAAGCTATCATCTCTCACTTAACACATCTTTCACACCAGTGTGCTAGAGCAGATAGCTGAAAAGTTTT-CCCTAAGCCAGAGATCATCCTGACAAGGCATATGGAACAATGGAAATGTCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACATTTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772308 419 - 3013352 GTGTGGACAATATTTAAAATTATTATATTTGGAGAGATAACTAGAATACT-CCTGCCAACTTAAATATGATCCATTAAATTGCTCTTAATTATAAATCAGACACTCTGGATTAGCACTTCACTATCATTTTCAAATCTACAGCATTTATATAAATTAATAACTACTATAGAGCATACTACTCATGGCTGAAAACAAGTGACCCGATGATTCTAGCTACCTAAGAACCACCTGA-TGTCTAACAGCACTAAGTATCAAGCTATCATCTCTCTCTTAACACATCTTTCACACCAGTGTGCTAGAGCAGATAGCTGAAAAGTTTT-CCCTAAGCCAGAGATCATCCTGACAAGGCATATGGAACAATGGAAATGTCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACATTTTTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001257 419 + 8656713 GTGTGGACAATATTTAAAATTATTTTATTTGGAGAGATAACTAGAATACT-CCTACCAACTTAACTATGATCCATTAAATTGCTCTTAATTATAAATCAGACACTCTGGATTAGCGCTTCACTATCATTTTCAAATCTACAGCATTTATATAAATTAATAATTACTGTAGAGCATACTACTCATGGCTGAAAAAAAGTGACCCGATGATTCTAGTTACCTAAGAACCACCTGA-TGTCTAACAGCACTCAGTATCAAACTATCACCTCTCTCTTAACACATCTTTCACACCAGTGTGCTAGAGCAGATAGCTGAAAAGTTTT-CCCTAAGCCAGAGATCATCCTGACAAGGCATATGGAACAATGGAAATGTCAACTTGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACATTTTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441009 414 - 190850796 GTGTGGACAATATTTAAAATTATTCTATTTGGAAAGATGACTAGAATACT-CCTGCCCA-----CTATGACCCATCAAATTGCTCTGAATTATAAAGTAGATACTCTAAATTAGCACTTAACTACCATTTTCAAATCTACAGCATTTATATACATCAATAACTGCTGTAGAGCATACTACTCATGGCTGAAAACAAGTGACCTGATAATTCTAGATACCCAGGACCCATCTGA-TATCTAACATCACTAAGGAACAAGCTATCACCTCTCCCTTAACACATCTTTCACACTAGTGTGCTACAGCAGATAGCTGAAAAGATTT-ACATAAGCCAGAGATCATCCTGATGAGACATAGGGAACACTGGAAATGCCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACTTGCTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6515979 407 - 25294431 GTGTGGACAATATTTAAAATTATTCTATTTGGAGAGATGACTAGAATACT-CCTGCCCACTTAGCTATGACCCGTTGAATTGCTCTGAATTATAAAGCAGATACTCTAAATTAGCACTTCACTACCATTTTCAAATCTACAGCAATTATATACATTAATAACTGCTGTAGAGCATACTACTCATGGCTGAAAACAAGTGACCTGATAATTCTAGATACCCAGGACCCAAC-------------TCACTAAGGATCAAGCTGTCACCTCTCCCTTAACACATCTTTTGCACCAGTGTGCTATAGCATATAGCTGAAAAGTTTT-ACATAAGCCAGAGATCATCCTGATGAGGCACAGGGAACACTGGAAATGCCAACATGCTTTCAAGACA------CGTAACAGTAATCCTG--GCTCTTAACTTGATTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4070588 419 - 6311556 GTGTGGACAATATTTAAAATTATTCTATTTGGAGAGACGACTAGAATACT-CCTGCCCACTTAGCTATGACCCGTTGAATTGCTTTGAATTATAAAGCAGATACTCTAAATTAGCACTTCACTACCATTTTCAAATCTACAGCATTTATATACATTAATAACTGCCGTAGAGCATACTACTCATGGCTGAAAATGAGTGACCTGATAATTCTAGATACCCAGGACCCACCTGA-TATCTAACATCACTAAGGATCAAGCTATCACCTCTCCCTAAACACATCTTTCACACCAGTGTGCTACAGCAGATAGCTGAAAAGTTTT-ACATAAGCCAGAGATCATCCTGATGAGGCACAGGGAACACTGGAAATGCCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACTTGCTTT i cebCap1.NW_016107420v1 I 1073 C 0 s aotNan1.NW_018507635v1 14926160 419 + 15034901 GTGTGGACAATATTTAAAATTATTCTATTTGGAGAGATGACTAGAATACT-CCTGCCCACTTAGCTATGACCCATTGAATTGCTCTGAATTATAAAGCAGATACTCTAAATTAGGGCTTCACTACCATTTTCAAATCTACAGCATTTATATACATTAATAACTGCTGTAGAGCATACTACTCATGGCTGAAAACAAGTGACCTGATAATTCTAGATACCCAGGACCCACCTGA-TATCTCACATCACTAAGGATCAAGCTAACACCTCTCCCTTAACACATCTTTCACACCAGTGTGCTACAGCAGATAGCTGAAAAGTTTT-ACATAAGCCAGAGATCATCCTGATGACGCATAGGGAACACTGGAAATGCCAACATGCTTTCAAGACA------AGTAACAGTAATCCTG--GCTCTTAACTTGCTTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26330184 420 - 93316391 GTGTGGGCAATATTTGAAATTACCATATTTGGAGAGATGACTAGAATACT-CCTGCCCACTCAACTACAACCCATTGAATTGCTGTGAATTATAAATCAGATCCCCTAGACTAGCATTCCACTACCATTTTCAAATCTACTGCATTTATACAAATTAATAATAGCTATAAAGCACACTGCTCAAGGCTGGAAACAAGTGACCTGATCATTCTGATTATCCAGTGTCCACCTGA-TGCCTAAGAGCTGTAGGGATCAGAACACCACTTCTCCTTTAATATGCCTTTCATACCAGTGTACTGCTGCAAATAGCTGAGAAGTTTTGCTTTAAGCCAGAGATCAACTTGATAAGTAATACAGAACACCAGAAATgtcaatatgctttcaagaca------agcaaaagaaatcctg--actcttaatttgcttt i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 949382 428 - 3201129 GTGTGGGCGATATTTGAAATTACTCCATTTGGAGAAATTACTAGAATATT-CCTCCCCACCCAACTATAAAGTATTGAATTTGTCTCAATTATAAATCAGATCCCCTAGAACAGTATATCATGCCTATTTTTAAGATTGCTACATTTATGTACATTAGTAGTGGCTGTAGAGAACATTGATCATGGCTGGAAGCTCATTACGTGATGCCTGTGATTATCCAGTGTCCACGTGA-TGCCTAAGAGCTATAAGGAGCAAGATACCCTCTCTCCTTTAACACACCTTTCATACCAGTGTGTTACTGCAAATAGCTAAAAGGTTTTGCTCTCAGCCAGAAATCAACCTTAGAAGTGATACAGGAAACCAGAAATTTCAACACACTTTCCATATACCCAACAGAAACAGAAATCCTAGTGCTTTTATTTTGATTT i otoGar3.GL873702 C 0 I 187 s canFam3.chr19 44053886 416 - 53741614 GTGTGGACAATAGATGAAATTACTATATTTGAAGAGATGACTAGAATACTCCCTACCCACTCAACTATGACCCAT-AAATTGCTCTGAATGATAAATCAGATGCTTTAAACCCACACTTCATTATCA-TTTCAAATGTGCTTCTTTCAAATAAGTTAATAAGAGTTGTAGAATATACTGGTCAGGGCCAGAAACAAGTGACCTGAGGACTGTGGCTGTCAGGGGTCCACCTGATTGCCTAACAGCTACTGGGATCA-GATGTCGCCTGTC-CTGAACGCAGCGTTCACACCAGTGTGCTACTGCA-AGAACTGAGAAGTTTTGCTCTAAATCACAGAGAAATCTGACAAGTACTATGTAAGACCAGAAATGTCAAAGTGCTTTCAA-ACA------GGTAACAGAAATCCTG--ACTCTTATTTTGTTTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1772580 396 + 5974691 GTGTGGGCAATGTTTGAAATGACCATATTTGGAAGGATGAATAAAATAAT-CCTCCCCACCGAACTACCGCCCATTGACTTGCTCTG-ATGATAAATCAGGTCCTCTAGATCAACCCTTTGCTAACACATTCAACTGCACTGCATGCACAGAAATTAATAATAGGTGCACATTGCAGTGCTCAAGGCTGGAAG-GAGTGTCCTTAAGATTCTGGTT-CCCAGGCACCACCTGATTGCCTAACATTG-TAGAAATC--------------CTGTCAACACACCTTTTGCACCAGTGTACTACTTCAGACAGCTCAGAAGGTTTGCGCTAAGCCCAAGATCAACCTGACAAATGATATATAAAATGAGAAATGTGAAGATGCTTTCATGACA------GGCAGCATAAATTCTG--ACTCTTAAC------- i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=537937.000000 s hg38.chr9_KI270719v1_random 52311 52 + 176845 AATAATAATGA-ATTC------TTTTATCAAGTCCTGAGGAATGAGGGCTTCC---AGGTGC s panTro5.chr4 135077096 55 + 194502333 AATAATAATGA-ATTC------TTTTATCAAGTCCTGAAGAATGAGGGCTTCCTCAGGGTGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57461 52 - 70559 AATAATAATGA-ATTC------TTTTATCAAGTCCTGAGGAATGAGGGCTTCC---AGGTGC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90471295 52 - 115148730 AATAATAATGA-ATTC------TTTTATCAAGTCCTGAGGAATGAGGGCTTCC---AGGTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131413356 52 + 190429646 AATAATAATGA-ATTC------TTTTATCATGTCCTGAGGAATGAGGGCTTCC---AGATGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130932360 52 + 189454096 AATAATAATGA-ATTC------TTTTATCATGTCCTGAGGAATGAGGGCTTCC---AGATGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924155 52 - 40319822 AATAATAATGA-ATTC------TTTTATCATGTCCTGAGGAATGAGGGCTTCC---AGATGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478054 52 - 9219162 AATAATAACGA-ATTC------TTTTATCATGTCCTGAGGAATGAGGGCTTCC---AGATGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79002969 52 + 135778131 AATAATAATGA-ATTC------TTTTATCATGTCCTGAGGAATGAGGGCTTCC---AGATGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772727 52 - 3013352 AATAATAATGA-ATTC------TTTTATCATGTCCTGAGGAATGAGGGCTTCC---AGATGC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001676 52 + 8656713 AATAATAATGA-ATTC------TTTTATCATGTCCTGAGGAATGAGGGCTTCC---AGATGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441423 53 - 190850796 AATAATAGAGACATTC------TCTTAACGTGTCCTGAGGAATGAGGACTTCC---AGGTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6516386 53 - 25294431 AATAATAAAGACATTC------TCTTATCATGTCCTAAGGAATGAGGGCTTCC---AGGTGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4071007 53 - 6311556 AATAATAAAGACATTC------TCTTATCGTGTCCTGAGGAATGAGGGCTTCC---AGGTGC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14926579 53 + 15034901 AATAATAAAGACATTC------TCTTATCATGTCCTGAGGAATGAGGGCTTCC---GGGTGC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26330604 53 - 93316391 aacaataaagaaattg------tcatatcatgtcccaaggaaggagggcttcc---aggTGC i micMur3.chr14 C 0 I 17 s canFam3.chr19 44054302 48 - 53741614 AACAATAAATAAATTC------TGATATCATGTACTAAAGAATGAAGTATTTC---A----- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1772976 56 + 5974691 ---AATAAAGAAATTCATTATTTCATATTTTGTCTTGAAGAAGGAGGGCTTCC---AAGGGT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 949810 187 - 3201129 I a score=51022.000000 s hg38.chr9_KI270719v1_random 52363 7 + 176845 CATATTT-- s panTro5.chr4 135077151 7 + 194502333 TGTATTT-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57513 7 - 70559 CGTATTT-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90471347 7 - 115148730 TGTATTT-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131413408 7 + 190429646 CTTATTT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130932412 7 + 189454096 CTTATTT-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924207 7 - 40319822 CTTATTT-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478106 7 - 9219162 CTTATTT-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003021 7 + 135778131 CTTATTT-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772779 7 - 3013352 CTTATTT-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001728 7 + 8656713 CTTATTT-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441476 7 - 190850796 CTTATTT-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6516439 7 - 25294431 CTTATTT-- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4071060 7 - 6311556 CTTATTT-- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14926632 7 + 15034901 TTTATTT-- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44054350 5 - 53741614 --TATTG-- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1773032 5 + 5974691 ----TTTAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26330657 17 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 949810 187 - 3201129 I a score=25218.000000 s hg38.chr9_KI270719v1_random 52370 3 + 176845 CCA s panTro5.chr4 135077158 3 + 194502333 CCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57520 3 - 70559 CCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90471354 3 - 115148730 CCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131413415 3 + 190429646 CCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130932419 3 + 189454096 CCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924214 3 - 40319822 CCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478113 3 - 9219162 CCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003028 3 + 135778131 CCG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772786 3 - 3013352 CCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001735 3 + 8656713 CCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441483 3 - 190850796 CCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6516446 3 - 25294431 CTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4071067 3 - 6311556 CCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14926639 3 + 15034901 CCA i aotNan1.NW_018507635v1 C 0 I 235 s otoGar3.GL873702 949997 3 - 3201129 CCA i otoGar3.GL873702 I 187 C 0 s canFam3.chr19 44054355 2 - 53741614 TC- i canFam3.chr19 C 0 C 0 e micMur3.chr14 26330657 17 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1773037 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=77370.000000 s hg38.chr9_KI270719v1_random 52373 10 + 176845 GGTGCTTATC s panTro5.chr4 135077161 10 + 194502333 GGTGCTTATC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57523 10 - 70559 GGTGCTTATC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90471357 10 - 115148730 GGTGCTTATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131413418 10 + 190429646 GGTGCTTATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130932422 10 + 189454096 GGTGCTTATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924217 10 - 40319822 GGTGCTTATC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478116 10 - 9219162 GGTGCTTATC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003031 10 + 135778131 GGTGCTTATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772789 10 - 3013352 GGTGCTTATC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001738 10 + 8656713 GGTGCTTATC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441486 10 - 190850796 TATGCTTATC i calJac3.chr3 C 0 I 221 s saiBol1.JH378129 6516449 10 - 25294431 TGGGCTTGTC i saiBol1.JH378129 C 0 I 225 s cebCap1.NW_016107420v1 4071070 10 - 6311556 TGTGCTTATC i cebCap1.NW_016107420v1 C 0 C 0 s otoGar3.GL873702 950000 10 - 3201129 GATGCTTCAT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1773037 3 + 5974691 -------ATC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26330657 17 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44054357 0 - 53741614 C e aotNan1.NW_018507635v1 14926642 235 + 15034901 I a score=10920.000000 s hg38.chr9_KI270719v1_random 52383 1 + 176845 A s panTro5.chr4 135077171 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57533 1 - 70559 A i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90471367 1 - 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131413428 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130932432 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924227 1 - 40319822 A i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478126 1 - 9219162 A i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003041 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772799 1 - 3013352 A i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001748 1 + 8656713 A i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441717 1 - 190850796 a i calJac3.chr3 I 221 C 0 s saiBol1.JH378129 6516684 1 - 25294431 a i saiBol1.JH378129 I 225 C 0 s cebCap1.NW_016107420v1 4071080 1 - 6311556 A i cebCap1.NW_016107420v1 C 0 I 224 s otoGar3.GL873702 950010 1 - 3201129 A i otoGar3.GL873702 C 0 I 4 s dasNov3.JH569232 1773040 1 + 5974691 A i dasNov3.JH569232 C 0 I 1 e micMur3.chr14 26330657 17 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44054357 0 - 53741614 C e aotNan1.NW_018507635v1 14926642 235 + 15034901 I a score=21552.000000 s hg38.chr9_KI270719v1_random 52384 3 + 176845 GAA s panTro5.chr4 135077172 3 + 194502333 GAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57534 3 - 70559 GAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90471368 3 - 115148730 GAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131413429 3 + 190429646 GAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130932433 3 + 189454096 GAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924228 3 - 40319822 GAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478127 3 - 9219162 GAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003042 3 + 135778131 GAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772800 3 - 3013352 GAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001749 3 + 8656713 GAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441718 2 - 190850796 -aa i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6516685 2 - 25294431 -AA i saiBol1.JH378129 C 0 I 1 s otoGar3.GL873702 950015 3 - 3201129 GGA i otoGar3.GL873702 I 4 C 0 s dasNov3.JH569232 1773042 3 + 5974691 GAC i dasNov3.JH569232 I 1 C 0 e micMur3.chr14 26330657 17 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44054357 0 - 53741614 C e aotNan1.NW_018507635v1 14926642 235 + 15034901 I e cebCap1.NW_016107420v1 4071081 224 - 6311556 I a score=29236.000000 s hg38.chr9_KI270719v1_random 52387 4 + 176845 TTTT- s panTro5.chr4 135077175 4 + 194502333 TTTT- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57537 4 - 70559 TTTT- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90471371 4 - 115148730 TTTT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131413432 4 + 190429646 GTTT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130932436 4 + 189454096 GTTT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924231 4 - 40319822 GTTT- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478130 4 - 9219162 GTTT- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003045 4 + 135778131 GTTT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772803 4 - 3013352 GTTT- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001752 4 + 8656713 GTTT- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441721 4 - 190850796 TTTT- i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6516688 4 - 25294431 TTTT- i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4071305 4 - 6311556 TTTT- i cebCap1.NW_016107420v1 I 224 C 0 s aotNan1.NW_018507635v1 14926877 4 + 15034901 TTTT- i aotNan1.NW_018507635v1 I 235 C 0 s otoGar3.GL873702 950018 2 - 3201129 --TT- i otoGar3.GL873702 C 0 I 2 s canFam3.chr19 44054357 4 - 53741614 TTTT- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1773045 4 + 5974691 -TTTA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26330657 17 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1581909.000000 s hg38.chr9_KI270719v1_random 52391 135 + 176845 TCTTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTATTCATATACAGAAA---GACAAGAAATTTATA-----TTCTAATAATAGAA---CACAAGTCC-ATCTCTTGCATCTGATTTAGCCAGATTAAGTCACCTTTCCACC s panTro5.chr4 135077179 135 + 194502333 TCTTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTATTCATATACAGAAA---GACAAGAAATTTATA-----TTCTAATAATAGAA---CACAAGTCC-ATCTCTTGCATCTGATTTAGCCAGATTAAGTCACCTTTCCACC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57541 135 - 70559 TCTTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTATTCATATACAGAAA---GACAAGAAATTTATA-----TTCTAATAATAGAA---CACAAGTCC-ATCTCTTGCATCTGATTTAGCCAGATTAAGTCACCTTTCCACC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90471375 135 - 115148730 TCTTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTATTCATACACAGAAA---GACAAGAAATTTATA-----TTCTAATAATAGAA---CACAAGTCC-CTCTCCTGCATCTGATTTAGCCAGATTAAGTCACCTTTCCAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131413436 135 + 190429646 TCTTTGCTGATAAGAACGATTGTTGCAGCATGCTTTGCTATTCATATTCAGAAA---GACAATAAATTTATA-----TTCTAATAATAGAA---CACAAGTAC-ATCTCTTGCATCTGATTTAGCCAGATTAAGTCACCTTTCCACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130932440 135 + 189454096 TCTTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTATTCATATTCAGAAA---GACAATAAATTTATA-----TTCTAATAATAGAA---CACAAGTAC-ATCTCTTGCATCTGATTTAGCCAGATTAAGTCACCTTTCCACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924235 135 - 40319822 TCTTTGTTGATAAGAACAATTGTTGCAGCATGCTTTGCTATTCATATTCAGAAA---GACAATAAATTTATA-----TTCTAATAATAGAA---CACAAGTAC-ATCTCTTGCATCTGATTTAGCCAGATTAAGTCACCTTTCCACC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478134 135 - 9219162 TCTTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTATTCATATTCAGAAA---GACAATAAATTTATA-----TTCTAATAATAGAA---CACAAGTAC-ATCTCTTGCATCTGATTTAGACAGATTAAGTCACCTTTCCACC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003049 135 + 135778131 TCTTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTATTCATATACAGAAA---GACAAGAAATTTATA-----TTCTAATAATAGAA---CACAAGTAC-ATCTCTTGCATCTGATTTAGCCAGATTAAGTCACCTTTCCACC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772807 135 - 3013352 TCTTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTATTCATATTCAGAAA---GACAATAAATTTATA-----TTCTCATAATAGAA---CACAAGTAC-ATCTCTTGCATCTGATTTAGCCAGATTAAGTCACCTTTTCGCC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001756 135 + 8656713 TCTTTGCTGATAAGAATAATTGTTGCAGCATGCTTTGCTATTCATATACAGAAA---GACAAGAAATTTATA-----TTCTAATAATAGAA---TACAAGTAC-ATCTCTTGCATCTGATTTAGCCAGATTAAGTCACCTTTCCACC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441725 135 - 190850796 TCTTTGCTGATAAGAATAATTATTGCAGCATGCTTTGCTTTTCATATACAGAAA---GACAAGAAATGTATC-----TTCTAATGCTAGAA---TACAAGTCT-GTCTCTTGCATCTGATTAAGCTAATTTAAGTCACCTTTCCACC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6516692 135 - 25294431 TCTTTACTGATAAGAACAATTGTTACAGCATGCTTTGCTTTTCATATGCAGAAA---AACAAGAAATGTATC-----TCCTAATAATAGAG---CACAAGTCC-ATCTCTTGCATCTGATTAAGCTAGATTAAGTCACCTTTCCACC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4071309 135 - 6311556 TATTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTTTTCATATACAGAAA---GACAAGAAATGTATC-----TTCTAATATTAGAA---CACAAGTCC-GTCTCTTGCATCTGATTAAGCTAGATTAAGTCACCTTTCCACC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14926881 135 + 15034901 TATTTGCTGATAAGAACAATTGTTGCAGCATGCTTTGCTTTTCATATACAGAAA---GGCAAAAAATGTATC-----TTCTAATAGTAGAA---CACAAGTCC-GTCTCTTGCATCTGATTAAGCTAGATTAAGTCACCTTTCCACC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26330674 138 - 93316391 TCTTTACTGATAAGAACAGGTGGTCCAGCATGCTATATTACTCATATACAGGAAGAGGACAAGAAGTGTATA-----TTCCAACAACAGAA---TACATGTCC-ATCTCTTGAGTCTGATTAGGCAAGATTAGGTCACCTTCCCACC i micMur3.chr14 I 17 I 513 s otoGar3.GL873702 950022 142 - 3201129 TTTTTATCAATAACAATAAGTGGTCCAACACACTGTGTTATTCATATACAGAAAGAGGACAAGACATTTTTA-----TTTCAACAATGGAATACTACAAGTCAGATCTCTTGAATCTGATTAGGCAAAATTATGTCATCTTTCTACC i otoGar3.GL873702 I 2 I 8 s canFam3.chr19 44054361 136 - 53741614 TTTTTCCTGATAAGAAAAACTGGTGCAGCATGTTTTGTTATTCATATGTGGAAAGGAGACAGGAAAT-TGTG-----TTCCAATAATGGAA---CACAGGTCC-ATTTCTTG-ATCTGATTAGGCCAGATTAGGTCACCTGCTCACC i canFam3.chr19 C 0 I 8 s dasNov3.JH569232 1773049 130 + 5974691 TCCTTGCTG--AAGAACAGCTGCTGCAATAGGCTTTGCTGTTCGGATACAGAAAGGAGACCCGAA---CATAGAGCGTTCCAGTAATTGAA---T---------ATCATTGGAGTCTCATTGGGTCAGATTAGAACACCTGTCCACA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=4618199.000000 s hg38.chr9_KI270719v1_random 52526 515 + 176845 AATATCAATCTGGAAGTGATATCATGAACTAAATGGTGTCAACCTGGGGTTTCTATTATATCT-------------------------CGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATACAGGATACATCTCTGTTTCGGGAGATGGGATGAGATTTCCCTGATTCTCCTACACTGCAGAGGGTAGAGGGAGGTATTTATATAATACACGGGATTTTAATTGAAGAAGCAAAGAGGAATGGATTATTGGG------ATTAATAGTGTTTATCCAATACAAGATGAAAAACAACATATTATTGTTTGTATTGTGATGGTTCTAGAATAAAACACATCA--TTTCTCTAATTTTGGTTAGATCTTTGCTGAAAGAA-----AAAGATAAATAAAATATCCTA-CAGTTTATCCATATCCATGTTCCTCTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTATATTTGATTTCTTTATAAATT--ACC--TTTTGAAAC------------TTTAAACACATAAAGACATTG----------TTTCCCCTTAAAGGAtttttcttt--t s panTro5.chr4 135077314 515 + 194502333 AATATCAATCTGGAAGTGATATCATGAATTAAATGGTGTCAACCTGGGGTTTCTATTATATCT-------------------------CGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATGCAGGGTACATCTCTGTTTCGGGAGGTGGGATGAGATTTCCTTGATTCTCCTACACTGCAGAGGGTAGAGGGAGGTATTTATATAATACACGGAATTTTAATTGAAGAAGCAAAGAGGAATGGATTAATGGG------ATTAATAGTGTTTATCCAATACAAGATGAAAAACAACATATTATTGTTTGTATTGTGATGGTTCTAGAATAAAACACATCA--TTTCTCTAATTTCGGTTAGATCTTTGCTGAAAGAA-----AAAGATAAATAAAATATCCTA-CAGTTTATCCATATCCATGTTCCTCTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTAGATTTGATTTCTTTATAAATT--ACC--TTTTGAAAC------------TTTAAACACATAAAGATGTTG----------TTTCCCCTTAAAGGAtttttgttt--t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 57676 515 - 70559 AATATCAATCTGGAAGTGATATCATGAACTAAATGGTGTCAACCTGGGGTTTCTATTATATCT-------------------------CGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATACAGGATACATCTCTGTTTCGGGAGATGGGATGAGATTTCCCTGATTCTCCTACACTGCAGAGGGTAGAGGGAGGTATTTATATAATACACGGAATTTTAATTGAAGAAGCAAAGAGGAATGGATTAATGGG------ATTAATAGTGTTTATCCAATACAAGATGAAAAACAACATATTATTGTTTGTATTGTGATGGTTCTAGAATAAAACACATCA--TTTCTCTAATTTTGGTTAGATCTTTGCTGAAAGAA-----AAAGATAAATAAAATATCCTA-CAGTTTATCCATATCCATGTTCCTCTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTATATTTGATTTCTTTATAAATT--ACC--TTTTGAAAC------------TTTAAACACATAAAGACATTG----------TTTCCCCTTAAAGGATttttcttt--t i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90471510 514 - 115148730 AATATCAATCTGGAAGTGATATCATGAACTAAATGGTGTCAACCTGGGGTTTCTATTATATCT-------------------------CGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATGCAGGGTACATCTCTGTTTCGGGAGATGGGATGAGATTTCTCTGGTTCTCTTACACTGCAGAGGGGAGAGGGAGATATTTATATAATACATGGAATTTTAATTGAAAAAGCAAAGAGGAATGGATTAATGGG------ATTAATAGTGTTTATCCAATACAAGATGAAAAACAACATATTATTATTTGTATTGTGATGGTTCTAGAATAAAACACATCA--TTTCTCTAATTTTGATTAGATCTTTGCCAAAAGAA-----AAAGATAAATAAAATATCCTA-CAGTTTATCCATATTCATGGTCCTCTACACTAAATATTCATCTTTGATTGGTTA--TTTTAACTATATTTGATTTCTTTATAAATT--ACC--TTTTGAAAC------------TTTAAACACATAAAGACATTG----------TTTCCCCTTAAAGGATTTTTCTTT--C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131413571 515 + 190429646 AATATCAATCTGGAAGTGATATCATGAACTAAATGTTGTCAGCCTGGGGTTTCTATTATATCT-------------------------AGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATGCAGGGTATATCTCTGTTTCAGGAGATGGGATGAGATTTCCCTGATTCTCCTACACTGCAGAGGGAAAAGGGAGATATTTATATAATATCAAGAATTTTAATTGAAGAAGCAAAGAGGAATGGATTGATGGG------ATGAATACTGTTTATCCAATACAAGATGAAAAGCAACATATTATTGTTTCTATTGTGATGGTTCTGGAATAAAGCACATCA--TTTCTCTAATTTCGATTAGATCTTTGCTGAAAGAA-----AATAATAAACAAAATATCCTA-CAGTTTATCCATATCTGTGTTCTTCTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTATATTTGATTTCCTTATAAGTT--ATC--TTTTGAAAC------------TTTAAACACATAAAGACATTG----------TTTCCCCTTAAAGGAtttttcttt--t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130932575 515 + 189454096 AATATCAATCTGGAAGTGATATCATGAACTAAATGTTGTCAGCCTGGGGTTTCTATTATATCT-------------------------AGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATGCAGGGTATATCTCTGTTTCAGGAGATGGGATGAGATTTCCCTGATTCTCCTACACTGCAGAGGGGAAAGGGAGATATTTATATAATATCAAGAATTTTAATTGAAGAAGCAAAGAGGAATGGATTGATGGG------ATGAATACTGTTTATCCAATACAAGATGAAAAGCAACATATTATTGTTTCTGTTGTGATGGTTCTGGAATAAAGCACATCA--TTTCTCTAATTTCGATTAGATCTTTGCTGAAAGAA-----AATAATAAATAAAATATCCTA-CAGTTTATCCATATCCGTGTTCTTCTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTATATTTGATTTCCTTATAAATT--ATC--TTTTGAAAC------------TTTAAACACATAAAGACATTG----------TTTCCCCTTAAAGGAtttttcttt--t i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924370 515 - 40319822 AATATCAATCTGGAAGTGATATCATGAACTAAATGTTGTCAGCCTGGGGTTTCTATTATATCT-------------------------AGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATGCAGGGTATATCTCTGTTTCAGGAGATGGGATGAGATTTCCCTGATTCTCCTACACTGCAGAGGGGAAAGGGAGATATTTATATAATATCAAGAATTTTAATTGAAGAAGCAAAGAGGAATGGATTGATGGG------ATGAATACTGTTTATCCAATACAAGATGAAAAGCAACATATTATTGTTTCTATTGTGATGGTTCTGGAATAAAGCACATCA--TTTCTCTAATTTCGATTAGATCTTTGCTGAAAGAA-----AATAATAAATAAAATATCCTA-CAGTTTATCCATATCCGTGTTCTTCTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTATATTTGATTTCCTTATAAATT--ATC--TTTTGAAAC------------TTTAAACACATAAAGACATTG----------TTTCCCCTTAAAGGAtttttcttt--t i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478269 515 - 9219162 AATATCAATCTGGAAGTGATATCATGAACTAAATGTTGTCAGCCTGGGGTTTCTATTATATCT-------------------------AGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATGCAGGGTATATCTCTGTTTCAGGAGATGGGATGAGATTTCCCTGATTCTCCTACACTGCAGAGGGGAAAGGGAGATATTTATATAATATCAAGAATTTTAATTGAAGAAGCAAAGAGGAATGGATTGATGGG------ATGAATTCTGTTTATCCAATACAAGATGAAAAGCAACATATTATTGTTTCTATTGTGATGGTTCTGGAATAAAGCACATCA--TTTCTCTAATTTCGATTAGATCTTTGCTGAAAGAA-----AATAATAAATAAAATATCCTA-CAGTTTATCCATATCCATGTTCTTCTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTATATTTGATTTCCTTATAAATT--ATC--TTTTGAAAC------------TTTAAACACATAAAGACATTG----------TTTCCCCTTAAAGGAtttttcttt--t i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003184 515 + 135778131 AATATCAATCTGGAAGTGATATCATGAACTAAATGTTGTCAGCCTGGGGTTTCTATTATATCT-------------------------CGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATGCAGGGTATATCTCTGTTTCAGGAGATGCGATGAGATTTCCCTGATTCTCCTGCACTGCAGAGGGGAAAGAGAGATATTTATATAATATCAAGAATTTTAATTGAAGAAGCAAAGAGGAATGGATTGATGGG------ATGAATACTGTTTATCCTATACAAGATGAAAAGCAACATATTATTGTTTCTAGTGTGATGGTTCTGGAATAAAGCACATCA--TTTCTCTAATTTCGATTAGATCTTTGCTGAAAGAA-----AATAATAAATAAAATATCCTA-CAGTTTATCCATATCCATGTTCCTCTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTATATTTGATTTCCTTATAAATT--ATC--TTTTGAAAC------------TTTAAACACATAAAGACATTG----------TTTCCCCTTAAAGGATTTTTCTTT--T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2772942 515 - 3013352 AATATCAATCTGGAAGTGATATCATGAACTAAATGTTGTCAGCCTGGGGTTTCTATTATATCT-------------------------AGACAAAGGAAAAGAAGTTGCCATCATTGGCAAGGTACATGCAGGGTATATCTCTGTTTCAGGAGATGGGATGAGATTTCCCTGATTCTCCTACACTGCAGAGGGGAAAGGGAGATATTTATATAATATCAAGAATTTTAATTGAAGAAGCAAAGAGGAATGGATTGATGGG------ATGAATTCTGTTTATCCAATACAAGATGAAAAGCAACATATTATTGTTTCTATTGTGATGGTTCTGGAATAAAGCACATCA--TTTCTCTAATTTCGATTAGATCTTTGCTGAAAGAA-----AATAATAAATAAAATATCCTA-CAGTTTATCCATATCCATGTTCTTCTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTATATTTGATTTCCTTATAAATT--ATC--TTTTGAAAC------------TTTAAACACATAAAGACATTG----------TTTCCCCCTAAAGGATttttcttt--t i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6001891 515 + 8656713 AATATCAATCTGGAAGTGATATCATGAACTAAATGGTGTCAACCTGGGGTTTCTATTATATCT-------------------------CGACGAAGGAAAAGAAGTTGCTATCATTGGCAAGGTACATGCAGGGTATATCTCTGTTTCAGGAGATGGGATGAGATTTCCCTGATTCTCCTACACTGCAGAGGGGAGAGAGAGATATTTATATAATATCAAGAATTTTAATTGAAGAAGCAAAGAGGAATGGATTGATGGG------ATGAATAGTGTTTATCCAGTACAAGATGAAAAGCAACATATTATTGTTTCTATTGTGGTGGTTCTGGAATAAAGCACATCA--TTTCTCTAATTTCGATTAGATCTTTGCTGAAAGAA-----AATAATAAATAAAATATCCTA-CAGATTATCCATATCCATGTTCCTGTACACTAAATATTCATCTTTGATTAGTTA-TTTTTAACTATATTTGATTTCCTTATAAATT--ATC--TTTTGAAAC------------TTTAAGCACATAAAGACATTG----------TTTTCCCTTAAAGGAtttttgttt--t i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129441860 513 - 190850796 AATGTCAATCTGGAAGTGATATCATGAACTACCTGGTGTCAACCTAGGGTTTCTGTTATAGCT-------------------------TGACAAAGGAAAAGAAGTTGCCGTCATTGGCAAGGTACAGGCAAGGTATATCTCTGTTTTGGGGGATGGGATGAGATTTCCCTAATTCTCCTACACTTCAAAGGGGAGAGGCAGATATTTCTGTAACATCAGGACTTTTTATTGAAGAAGCAAAGAGGAATGGATTTATGGG------ATTAATAGTGTTTATCCAATGGAAGATGAAAAACTGTGTCTTATTTTTTGTATTGTGATGTCTCTAAAATAAAGCACATCA--TTTTTCTAATTGTAATTAGATCTTTGCTGAAAGAA-----TATAATAAATAAAATACCCCA-CCATTTATCCATATCCATATTCCTCTACCCTACATATTTACCTTTGATCGGTTA-TTTTTAACTATATTTGATTTCCTTATAAATT--ACC---TTTGAAAC------------TTTATACAATTAAAGACATTG----------TTTCTCCTTAAAGGATTTTCCTTT--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6516827 431 - 25294431 AATGTCAATCTGGAAGTGATATCATGAACTAAATGGTGTCAACCTAGGGTTTCTGTTATAACT-------------------------TGACAAAGGGAAAGAAGTTGCCATCATTGGCAAGGTACAGGCAAGATACATCTCTGTTTTGGGGGAT-GGATGAGATTTCCCTAATTCTCCTACACTGCAAAGGGGAGAGGAAGATATTTCTATAATATCAGGAC---------------------------------------------------------------------------------------TTTTTGTATTGAGGTGTCTCTAAAATAAAGCACATCA--TTTTTCTAATTGTAATTAGATCTTTGCTGAAAGAA-----TATAATAAATAAAATACCCTA-CAGTTTATCCATATCCATGTTCCTCTACACTAAATATTTATCTTTGATCATTTA--TTTTAACTGTATTTGATTTCCTTATAAATT--ACC--TTTTGAAAC------------TTTATACACTTAAAGACATTG----------TTTCTCCTTAAAGGATTTTCTTTT--- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4071444 433 - 6311556 AATGTCAA-CTGGAAGTGATATCATGAACTAAATGGTGTCAACCTAGGGTTTCTGTTATAGCT-------------------------TGACAAAGGAAAAGAGGTTGCCATCATTGGCAAGGTACAGGCAAGATACATCTCTGTTTAGGGGGATGGGATGAGATTTCCCTAATTCTCCTACACTGCAAAGGGGAGAGGCAGATATTTCTATAATATCAGGAC---------------------------------------------------------------------------------------TTTTTGTATTGGGATGTCTCTAAAATAAAGCACATCA--TTTTTCTAATTGTAATTAGATATTTGCTGAAAGAA-----TATAATAAATAAAATACCCTA-CAGTTTATCCATATCCATGTTCCTCTACACTAAATATTTATCTTTGGTCAGTTA-TTTTTAACTATATTTGATTTCCTTGTAAATT--ACC--CTTTGAAAC------------TTTATACACTTAAAGACATTG----------TTTCTCCTTAAAGGATTTTCCTTTC-- i cebCap1.NW_016107420v1 C 0 I 16 s aotNan1.NW_018507635v1 14927016 515 + 15034901 AACATCAATCTGGAAGTGATATCATGAACTGAATGGTGTCAACCTACGGTTTCTGTTATAGCT-------------------------TGACAAAGGAAAAGAAGTTGCCATCACTGGCAAGGTACAGGCAAGGTACATCTCTGTTTTGTGGGATGGGATGAGATTTCCCTAATTCTCCTATACTGCAAAGGGGAGAGGCAGATATTTCTATAATATCAGGACTTATTATTGAAGAAGCAAAGAGGAATGGATTTATGGG------ATTAATAGTGTTTTTCCAATGGAAGATGAAAAACTATGTCTTATTTTTTGAATTGTGATGTATCTAAAATAAAGCACATCA--TTTTTCTAATTGTAATTAGATCTTTGCTGAAAGAA-----TATAATAAATAAAATACCCTA-CAGTTTATCCATATCCATGTTCCTCTACACTAAATATTTATCTTTGATCAGTTA-TTTTTAACTATATTTGATTTTCTTATAAATT--ACC--TTTTGAAAC------------TTAATACACTTAAAGACATCG----------TTTCTCCTTAAAGAATTTTCCTTT-C- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 950172 490 - 3201129 AGTATCAGTCTAGAAGTCATGCCATTAACCGAATGATGTAAGCCTGGGTTTTGCATCCAATCTTCCAGCTAGGCTACAATCTTCCAGCTAACAAAGGGAAAG----TACCACAGCTTAC------CACATAGGGCACATCTCTGTCCTTGGGAGTAGAATGGGATT---------------------------------------TTTCAATAATAACA--------TACTGAAGAAAGAAAGAGAAATAGATTGGTGAGCAGACAATTAACAGTGTTCTTCTGAAAGGAAGCAAAA----GCATTATCTTGTTCATACTGTGATGGCTCTGAAATAAAGCACATTA--TTTC-----TTTTGATTGAAACTTTGCTGGGAAAGTATACAAAAATAAACATAATTCCCTA-TGGTTTATCAATATCCATGCCTTTCTACAATAAATATCTGTCTTTGATTAGTTA-TTTGAAACTATATTTGATTTCCTTCTAAAAT--TACAATTTTACACC------------TTCAAAGATATACAGATGCTGTGT------TTTTCTCTTAAATAGGTTTTCCTTT--- i otoGar3.GL873702 I 8 C 0 s canFam3.chr19 44054505 486 - 53741614 ATTATTAATCTGGGAGCAATGCCGTGAACTGTATGATGCAAATCT-GGCTTCCTATGGTATCT-------------------TTGAGCTAACAATGGGAAAGGGCTTATC--------------------------CATCTCTGCCCTTTG-GATGGGATGAAATTCCCCTGATTCATTGATGCTGCATAAAGAGGGG------------ATAATACCAGGATTCTATATAGAAATAGT-AAGAGGAATGGATGGATGAGTAA---CTAACTAGTGTTTATCTGCTATTAAATGAAGA-TAACAATTCATTGTTTCTACTGTGATGGCTCTGAAATAGAACACATTAGGTTTTCTTTATTTTGATTCTATATATGCTGAAAACA-----GATAAAAAATTAAATATCCTA-CAGTTTGGCCAT-TCCATGATTCTGTTCACTTAATCT----CTTTGATTAGTTACTTTTCAAATGTCTATAGTTTCCTTAGAAAATTAATC-ATTTTGTAAC------------TTCAAACACATGAAGCTATTATGG------TTTTCTCCTAAAGGTATTTTCCTTT--- i canFam3.chr19 I 8 I 2 s dasNov3.JH569232 1773179 405 + 5974691 ---------CTCGAACCAATATTA-------------GTTAGCACAG------------ATTT-------------------------TGAGGGAGCGAAGG-----------------------------------------------------------------------------------------------GGTAGATATTTGAATAATATCAGGATTCTATTTAGAAAAAGGAAAGATG-ATAAATTGATAGGCA----ATTAACAGTGTTCATTCAGTATAAATTGAAAGGCAGCATCTTATTACTTTTGTTGTGGTGGCTGTGAAATAGAACACATCT--TTTCATTAATTTTTATTAGATCTTCACTTACAAAG-----GATTGAAAACAAAACCTTCCATCAGCTTATCTATACTTATACTCCTCTACACTAAACATTTATATTTGATTAGGTA-TTTTAAACAACACTTGATTTTTTT------T--ATC-ATTTTGTAACCTCAAGCTATATTTCGAACACATAGAGATATTGTGGGGGTTTTTTTCCTCTATGGGGATTTTTCCTT--T i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26330812 513 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=93141.000000 s hg38.chr9_KI270719v1_random 53041 24 + 176845 gctttcttttg---tttttttttttAT s panTro5.chr4 135077829 23 + 194502333 cctttcttttg---tttttttttA-AT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 58191 21 - 70559 cctttcttttg---tttttttA---AT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90472024 21 - 115148730 CCTTTCTTTTG---TTTTTTTA---AT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131414086 23 + 190429646 cctttgttttg--tttttttttA--AT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130933090 22 + 189454096 cctttgttttg---ttttttttA--AT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924885 22 - 40319822 cctttgttttg---ttttttttA--AT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478784 22 - 9219162 cctttgttttg---ttttttttA--AT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003699 22 + 135778131 CCTTTCTTTTG---TTTTTTCTA--AT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2773457 21 - 3013352 cctttgttttg---tttttt-tA--AT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6002406 25 + 8656713 cctttcttttgtttttttttttA--AT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129442373 21 - 190850796 CCTTTCTTTTG---ATTTTTTT---AT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6517258 21 - 25294431 CCTTTCTTTCG---ATTTTTGA---AT i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14927531 20 + 15034901 -CTTTCTTTTG---ATTTTTTA---AT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 950662 13 - 3201129 -CTTTCCTTTT---TGC---------- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44054993 22 - 53741614 TCTCTCTCTTT---TTTTTCTTA--AC i canFam3.chr19 I 2 C 0 s dasNov3.JH569232 1773584 19 + 5974691 CCTTTCTTTTC---TTTCTAAC----- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26330812 513 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e cebCap1.NW_016107420v1 4071877 16 - 6311556 I a score=199702.000000 s hg38.chr9_KI270719v1_random 53065 23 + 176845 CTAAAACTTTCTTTC----AAAAACAA s panTro5.chr4 135077852 23 + 194502333 CTAAAACTTTCTTTC----AAAAACAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 58212 23 - 70559 CTAAAACTTACTTTC----AAAAACAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90472045 23 - 115148730 CTAAAACTTTCTTTC----AAAAACAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131414109 23 + 190429646 CTAAAACTTTCTTTC----AAAAACAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130933112 23 + 189454096 CTAAAACTTTCTTTC----AAAAACAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924907 23 - 40319822 CTAAAACTTTCTTTC----AAAAACAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478806 23 - 9219162 CTAAAACTTTCTTTC----AAAAACAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003721 23 + 135778131 CTAAAACTTTCTTTC----AAAAACAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2773478 23 - 3013352 CTAAAACTTTCTTTC----AAAAACAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6002431 23 + 8656713 CTAAAACTTTCTTTC----AAAAACAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129442394 22 - 190850796 CTAAAGCTATTTTTC----AAAAA-AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6517279 22 - 25294431 CTAAAGCTATTTTTC----AAAAA-AA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4071893 22 - 6311556 CTAAAGCTATTTTTC----AAAAA-AA i cebCap1.NW_016107420v1 I 16 C 0 s aotNan1.NW_018507635v1 14927551 22 + 15034901 CTAAAGCTGTTTTTC----AAAAA-AA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 950675 23 - 3201129 CTAAAACTACTTTTG----AAAAAAAA i otoGar3.GL873702 C 0 I 2 s canFam3.chr19 44055015 25 - 53741614 CCAAAACTGCTTTTC--CTCAAAATAG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1773603 23 + 5974691 ATAAAATGATTTTTCCCCCAAAA---- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26330812 513 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=666545.000000 s hg38.chr9_KI270719v1_random 53088 50 + 176845 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATTTTTATTAACATT s panTro5.chr4 135077875 50 + 194502333 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATTTTTATTAACATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 58235 50 - 70559 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATTTTTATTAACATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90472068 50 - 115148730 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATTTTTATTAACATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131414132 50 + 190429646 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATTTTTGTTAACATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130933135 50 + 189454096 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATTTTTGTTAACATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924930 50 - 40319822 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATTTTTGTTAACATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478829 50 - 9219162 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATTTTTGTTAACATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003744 50 + 135778131 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATGTTTGTTAACATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2773501 50 - 3013352 -TGACTTTCAGAAACTTGCAACTTGTTAAATATAGTATTTTTGTTAACATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6002454 50 + 8656713 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATTTTTGTTAACATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129442416 50 - 190850796 -TGACTTTCATAAACTTGCAACTTGTTAAATATGGTATCTTTATTAACATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6517301 50 - 25294431 -TGACTTTCATAAACTTGCAACTTGCTAAATATAGTATCTTTATTAACATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4071915 50 - 6311556 -TGACTTTCATAAACTTGCAACTTGTTAAATATAGTATCTTTATTAACATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14927573 50 + 15034901 -TGACTTTCATAAACTTGCAACTCGCTAAATATAGTATCTTTATTAACATT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26331325 50 - 93316391 -TGACTTTCATAAGCTTACAACTTGTTTAATATGGTATCTTTATTAACATT i micMur3.chr14 I 513 I 43 s otoGar3.GL873702 950700 50 - 3201129 -TGACTTTCATAAGCTTACAACTTGCTTAATATGGTGTCTTTATTAACACT i otoGar3.GL873702 I 2 C 0 s canFam3.chr19 44055040 48 - 53741614 -TGACTTTTATAAACTTGTAACTTGTTAAGTATGATGTCTTTATTAACA-- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1773626 50 + 5974691 GGAGCTTCCATAA-TTCATCACTTTTTAAACATGATATCTTTATTAACATT i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=433213.000000 s hg38.chr9_KI270719v1_random 53138 47 + 176845 CTAGTTTGTAACACAAGGCAAAACCTAAACACTTACCATTTATAAAT s panTro5.chr4 135077925 47 + 194502333 CTAGTTTGTAACACAAGGCAAAACCTAAACATTTACCATTTATAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 58285 47 - 70559 CTAGTTTGTAACACAAGGCAAAACCTAAACACTTACCATTTATAAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90472118 47 - 115148730 CTAGTTTGTAACACAAGGCAAAACCTAAACATTTACCATTTATAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131414182 47 + 190429646 CTAGTTTGTAACACAAGGCAAAACCTAAACCTTTACTATTTATATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130933185 47 + 189454096 CTAGTTTGTAACACAAGGCAAAACCTAAACCTTTACTATTTATATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34924980 47 - 40319822 CTAGTTTGTAACACAAGGCAAAACCTAAACCTTTACTATTTATATAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478879 47 - 9219162 CTAGTTTGTAACACAAGGCAAAACCTAAACCTTTACTATTTATATAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003794 47 + 135778131 CTAGTTTGTAACACAAGGCAAAACCTAAACTTTTACTATTTATATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2773551 47 - 3013352 CTAGTTTGTAACACAAGGCAAAACCTAAACCTTTACTATTTATATAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6002504 47 + 8656713 CTAGTTTGTAACACAAGGCAAAATCTAAACCTTTACCATTTATATAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129442466 47 - 190850796 CCAGTCTGTAAGACAAGGAAAAACCTAAACATTTAGTATTTATAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6517351 47 - 25294431 CTAGTTTATAACACAAGGAAAAACCTAAACATTTACTATTTACAAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4071965 47 - 6311556 CTAGTTTGTAACACAAGGAAAAGCCTAAACATTTACTATTTATAAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14927623 47 + 15034901 CTAGTTTGTAACACAAGGAAAAACCTAAACATTTACTATTTATAAAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 950750 43 - 3201129 ATAATTGCTAGCACATTTTAAAACCTAAATGTATACTATAAGA---- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44055088 47 - 53741614 CTAGATTCTAGCACAATTTAAAATATACATGTATATTATTTATAAGC i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1773676 46 + 5974691 GTAGTTTCTAGTGCAATTTACAAT-GAAGAAAATATTCTTTAAAAGA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26331375 43 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=6420325.000000 s hg38.chr9_KI270719v1_random 53185 485 + 176845 AAT-GGGTAATACTGTTTCAACTTAACCTTGAGAATGTAG---------AAAAAAAA-TTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCACTACAGTCACCAACCAGCCTGCCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GAAAAAAA---AA--TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACAAGGAAGCTTCAAAGTC--TTTTTATTCTGAAATGTTAT-TTTAT---TCTGCTTTATATCATCTTAAATttattagtattatattaaatattagttt------atgtaagcttattattTGACTCTGTATAGGATATAATAGATGGCATTGAATATTTAATAAGATAGCAACAGCA s panTro5.chr4 135077972 488 + 194502333 AAT-GGGTAATACTGTTTCAACTTAACCTTGAAAATGTAG---------AAAAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AAAGGATCTCAGAAACAGTGATCTTAGTGCTAGCCTGGCAGACACAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTGCCCCTGGGGCCTATTTCAGAAACAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GAAAAAAA---AAAATGTTGTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACAGGGAAGCTTCAAAGTC--TTTTTATTCTGAAATGTTAT-TTTAT---TCTGCTTTATATCATCTTAAATttattagtattatattaaatattagttt------atgtaagcttattattTGACTCTGTATAGGATATAATAGATGGCATTGAATATTTAATAAGATAGCAACAGCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 58332 485 - 70559 AAT-GGGTAATACTGTTTCAACTTAACCTTGAGAATGTAG---------AAAAAAAA-TTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTGCCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GAAAAAAA---AA--TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACAGGGAAGCTTCAAAGTC--TTTTTATTCTGAAATGTTAT-TTTAT---TCTGCTTTATATCATCTTAAATTTATTAGTATTATATTAAATATTAGTTT------ATGTAAGCTTATTATTTGACTCTGTATAGGATATAATAGATGGCATTGAATATTTAATAAGATAGCAACAGCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90472165 486 - 115148730 AAT-GGGTAATACTGTTTCAACTTAACCTTGAAAATGTAG---------AAAAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCACTACAGTCACCAACCAGCCTGCCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GAAAAAAA---AA--TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACTGGGAAGCTTCAAAGTG--TTTTTATTCTGAAATGTTAT-TTTAT---TCTGCTTTATATCATCTTAAATTTATTAGTATTATATTAAATATTAGTTT------ATGTAAGCTTATTATTTGACTCTGTATAGGATATAATAGATGGCATTGAATATTTAATAAGATAGCAACAGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131414229 491 + 190429646 AATGGGGTAATACTGTTTCAACTTAACCTTGAAAACATAG-----AAAAAAAAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACGGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTATCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GGAAAAAA---A---TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACAGGGAAGCTTCAAAGTC-TCTTTTTTTCTGAAATATTAT-TTTAT---TCTGCTTTATATCATCTTAAATTTATTAGTATTATATTAAACATTAGTTT------ATGTAAGCTTATTATTTGACTCTGTATAGGCTATAATAGATGGCATTGAATATTTAATAAGATAGCAACGGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130933232 491 + 189454096 AATGGGGTAATACTGTTTCAACTTAACCTTGAAAACATAG-----AAAAAAAAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACGGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTATCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GGAAAAAA---A---TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACAGGGAAGCTTCAAAGTC-TTTTTTTTTCTGAAATATTAT-TTTAT---TCTGCTTTATATCATCTTAAATTTATTAGTATTATATTAAACATTAGTTT------ATGTAAGCTTATTATTTGACTCTGTATAGGCTATAATAGATGGCATTGAATATTTAATAAGATAGCAACGGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34925027 493 - 40319822 AATGGGGTAATACTGTTTCAACTTAACCTTGaaaacatag----aaaaaaaaaaaaaaaTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACGGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTATCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GGAAAAAA---A---TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACAGGGAAGCTTCAAAGTCTTTTTTTTTTCTGAAATATTAT-TTTAT---TCTGCTTTATATCATCTTAAATTTATTAGTATTATATTAAACATTAGTTT------ATGTAAGCTTATTATTTGACTCTGTATAGGCTATAATAGATGGCATTGAATATTTAATAAGATAGCAACGGCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4478926 496 - 9219162 AATGGGGTAATACTGTTTCAACTTAACCTTGAAAACATAGGaaaaaaaaaaaaaaaaaTTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACGGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTACCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GGAAAAAA---A---TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACAGGGAAGCTTCAAAGTC-TTTTTTTTTCTGAAATATTAT-TTTAT---TCTGCTTTATATCATCTTAAATTTATTAGTATTATATTAAATATTAGTTT------ATGTAAGCTTATTATTTGACTCTGTGTAGGCTATAATAGATGGCATTGAATATTTAATAAGATAGCAATGGCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79003841 490 + 135778131 AATGGGGTAATACTGTTTCAACTTAACCTTGAAAACATAG------AAAAAAAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCCAGCCTGGCAGACACAATCTGCACGGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTACCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GGAAAAAA---A---TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACAGGGAAGCTTCAAAGTC-TTTTTTATTCTGAAGTATTAT-TTTAT---TCTGCTTTATATCATCTTAAATTTATTAGTATTATATTAAATATTAGTTT------ATGTAAGCTTATTATTTGACTCTGTATAGGCTATAATAGATGGCATTGAATATTTAATAAGATAGCAACAGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2773598 490 - 3013352 AATGGGGTAATACTGTTTCAACTTAACCTTGAAAACATAG------GAAAAAAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACGGAACTTAATCAAAATAGGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTACCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGCAGAAGAAG----GGAAAAAA---A---TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATACAGGGAAGCTTCAAAGTC-TTTTTTTTTCTGAAATATTAT-TTTAT---TCTGCTTTAAATCATCTTAAATTTATTAGTATTATATTAAATATTAGTTT------ATGTAAGCTTATTATTTGACTCTGTATAGGCTATAATAGATGGCATTGAATATTTAATAAGATAGCAACGGCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6002551 490 + 8656713 AATGGGGTAATACTGTTTCAACTTAACCTTGAAAACATAG------AAAAAAAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGGCACAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCTATAGCAATTTCCTTGAGTGGCCAGTCAGATATTCCCCATTACAGTCACCAACCAGCCTACCCCTGGGGCCTATTTCAGAAATAAATTGGTTTGTAGATGAGCTGATGTAGAAGAAG----GGAAAAAA---A---TGTTTTCTTGAGGC-TGTA-C-C-TAAATCTTATCAAGTAATACAGGGAAGCTTCAAAGTC-TTTTTTATTCTGAAATGTTAT-TTTAT---TCTGCTTTATATCATCTTAAATttattagtattatattaaatattagttt------atgtaagcttattattTGACTCTGTATAGGTTATAATAGATGGCATTGAATATTTAATAAGATAGCAACAGCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129442513 480 - 190850796 AAT-GAGTAATACTGTTTCAAGTTAACCTTGAAAATGTAG------------AAAAAACTGAGTC-CAGTCTGATAGCAGCCAAAAAAATCTCAGAAACAGTAATCTTAGTGCCAGCCTGGCAGACAGAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTGTCCCTGGGGCCTATTTCAGAAATAAATTGGTTCGTAGATGAGCTGATGCAGAAGAAGAATAAAAAAAAA---A---TGTTTTCTTGAGG--TGGA-C-C-TAAATCTTATCATGTAATACAGGGAACTTTCAAAGTA--TTTTTATTCTGAAATGTTCT-TTT-T---TCTGCTTTATATCATCTTAAATTTATTAGTATTGTATTAAACA-----TT------ATGTAAGCTTCTTATCTGACTCTGTATAGAATATAATAGATGGCATTGAATATTTAATAAGATAGCAACAGCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6517398 478 - 25294431 AAT-GAATAATACTGTTTCAAGTTAACCTTGAAAATGTAG-----------AAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AGAAAATCTCAGAAACAGTAATCTTAGTGCCAGCCTGGCAGACAGAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCCTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCGACCAGCCTGCCCCTGGGGCCTATTTCAGAAATAAATTGGTTCGTAGATGAGCTGATGCAGAAGAAG----GAAAAAAA---A---TGTTTTCTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATCCAGGGAACTTTCAAAGTT--TTTTTATTCTGAAATGTTCT-TTTAT---TCTGCTTTATATCATCTTAAATTTATTAATGTTATATTAAACA-----TT------ATGTAAACTTCTTATCTGACTCTGTATAGGATGTAATAGATGGCATTGAATATTTAATAAGATAGCAACAGCC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4072012 479 - 6311556 AAT-GAATAATACTGTTTCAAGTTAACCTTGAAAATGTAG-----------AAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AAAAAATCTCAGAAACAGTAATCGTAGTGCCAGCCTGGCAGACAGAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCACCAACCAGCCTGCCCCTGGGGCCTATTTCAGGAATAAATTGGTTCGTAGATGAGCTGATGCAGAAGAAG---GAAAAAAAA---A---TGTTTTTTTGAGAC-TGTA-C-C-TAAATCTTATCAAGTAATCCAGGGAAATTTCAAAGTA--TTTTTATTCTGAAATGTTCT-TTTAT---TCTGCTTTATATCATCTTAAATTTATTAGTATTATATTAAACA-----TT------ATGTAAGCTTCTTATCTGAGTCTGTATAGGATATAATAGATGGCTTTGAATATTTAATAAGATAGCAACAGCC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14927670 480 + 15034901 AAT-GAATAATACTGTTTCAAGTTAACCTTGAAAATGTAG-----------AAAAAAATTGAGTC-CAGTCTGATAGCAGCC-AAAAAATCTCAGAAACAGTAATCTTCGTGCT-GCCTGGCAGACAGAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGCCACCAACCAGCCTGCCCCTGGGGCCTATTTCAGAAATAAATTGGTTCGTAGATGAGCTGATGCAGAAGAAG-GAAAAAAAAAA---A---TGTTTTGTTGAGAC-TGTA-C-C-TAAATCTAATCAAGTAATACAGGGAACTTTCAAAGTA--TTTTTATTCTGAAATGTTCT-TTTAT---TCTGCTttatatcatcttaaatttattagtattatattaAACA-----TT------ATGTAAGCTTCTTATCTGACTATGTATAGGATATAATAGATGGCACTGAATATTTAATAAGATAGCAACAGCC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26331418 486 - 93316391 AAT-GGGTAATATTGTTTCAACTTAACCTTGAAAAAGTAG-----------AAAAAAATTGAGTCTCAGTCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATTCCCCATTACAGTCACCAACCAGCCTGTCCCTGGGGCCTATTTCAGAAATAAATTGGTTCATAGATGAGCTGATGCAGAAGAAG----AAAAAAAA---A---TGTTTTTGTGAGACTTGCA-CCC-TATATGTTGTCAAGTAATACAGGAAAACTTTGAAGTT--GTTCTATTCTGAAATGTTCT-CTTTT---TCTGCTTTATATCTTCTTAAATTAATTAGTGTTATATGAAATATTGGTTT------ATATTAGCCTATTATTTGACTGTGTATAGGATACAATAGGCGGCATTAAATATTTAATAAGATAGCAACAGCA i micMur3.chr14 I 43 I 23 s otoGar3.GL873702 950793 493 - 3201129 AAT-AGGTAATATTGTTTCAAGTTAACCTTGAAAAAGTAG-----------AAAAAAATTGAGTCTCAGCCTGATAGCAGCC-AAAAGATCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTGCACAGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGTCCAGTCAGATATTCCCCATTACAGTCACCAACCAGCCTGCCCCTGGGGCCTATTTCAGGGATAAATTGGTTCATAGATGAGCTGATGCAGAAGAAG----GAAAAAAATATA---TATATTTGTGAGATTTGTA-CTC-TAAATTTTATCAAGTAATACAGGAAAACTTCAAGGTT--ATTTTATTTTGAAATGTTCT--TTAT---TCAGCTTTCTATCTT-TTAAATTAATTAGTATTATATGAAATATCAGTTTATACACATACTAGCTTATTTTTTCACTACTTGTTGGACATAATGGGTGGtattaaatttttaataatattGCAACAGCA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44055135 489 - 53741614 AAT-GGGTGATATTGTTCCAACATAACCTTGAAAAAGTAG--------GGAAAAAAAATTCGGTCTGAGTCCAGCAGCAGCC-AAAGGAGCTCAGAAACAGTAATGTTAGTGCTAGCCTGGCAGACACAATTTACACGGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATAT-CCCCATTACGGTCACCAACCAGTCTGCCCCAGGGGCCTATTTCAGAAATAAATTGGTTCGTAGATGAGCTGATGCAGAAGAAG----AAAAAAAA---A---TGTTTTCTTGAGAC-TGTATC-C-TAAATTTTATCAAGTAATACAGGGAAACTTCAGAGTC--TTTTTATTCTGAAATGTTCT-TTTTTAAATTTGCTTTATACATTCttaaatttattaatattttattaaatattaGTTT------ATGTAAGCTTATTGTTTGACTTTGTATAGGATTTATTAGGTGGCATTAAATACTTAATAAAAAAGT-ACAGCA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1773722 482 + 5974691 AAT-GTGTAATATTGTTTCAGCTTAACCTTGAAAAAGTAG---------AAAAAAAAATTGAGTCTTAGTCGAATAGCAACC-AAAAG-CCTCAGAAACAGTAATCTTAGTGCTAGCCTGGCAGACACAATCTACACGGAACTTAATCAAAATAAGATTAAAAGTCCATAGCAATTTCCTTGAGTGGCCAGTCAGATATCCCCCATTACAGTCATCAACCAGCCTGCCCCTGGGGCTTATTTCAGAAATAAATTGGTTCATAGATGAGCTGAGGCAGAAGAAG------AAAAAA---A---TGTTTCCTTGAGGC-TCTA-C-CTTAAATTTTATCAAGTAATACAATAAGACTTGAAAGTC--TTTTTATTCTGAAATATTCTTTTTAT---TCTGCTTTGTATCTTCTCACTTTTACCAGTATTATATGAAATACTAGTTT------ATATAATATT-TTGCTTAAGTTCATATAGGTT-TAATAGACAGCATTAAATATTCAATAAAATAA-AACAGCA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=660730.000000 s hg38.chr9_KI270719v1_random 53670 53 + 176845 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT s panTro5.chr4 135078460 53 + 194502333 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 58817 53 - 70559 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90472651 53 - 115148730 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131414720 53 + 190429646 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130933723 53 + 189454096 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34925520 53 - 40319822 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4479422 53 - 9219162 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79004331 53 + 135778131 ATAACACCTGGAAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2774088 53 - 3013352 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6003041 53 + 8656713 ATAACACCTGAGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129442993 53 - 190850796 ATAACACCTGGGAAATGGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6517876 53 - 25294431 ATAACACCTGGGAAATTGTTCAGGGAAGAATTCTATTCAGTTATTAAAGGATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4072491 53 - 6311556 ATAACACCTGGGAAATTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14928150 53 + 15034901 ATAACACCTGGGAAGTTGTTCAGGGAAGGATTCTATTCAGTTATTAAAAGATT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 951286 51 - 3201129 GTAACACCTAGGCAATATTTCAGGGAAAGattttattatgttattaaaata-- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44055624 53 - 53741614 GTAACACATGGGAAATTGTTCAGAGAACAATTTTATTCAGTTATTAGAAGATT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1774204 53 + 5974691 GTAATCTTTGGCCAAGTGTTCAGGGAAGGATTCTACTTAGTTATTAGAAGATT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26331904 23 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=828202.000000 s hg38.chr9_KI270719v1_random 53723 66 + 176845 TGCATACTTATTTCACTAATATTACTCAGCAATCACAAACATTGGGTAATGCTAGACAAATCTGCA s panTro5.chr4 135078513 66 + 194502333 TGCATACTTATTTCGCTAATATTACTCAGCAATCACAAACACTGGGTAATGCTAGACAAATCTGCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 58870 66 - 70559 TGCATACTTATTTCACTAATATTACTCAGCAATCACAAACATTGGGTAATGCTAGACAAATCTGCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90472704 66 - 115148730 TGCATACTTATTTCACTAATATTACTCAGCAATCACAAACATTGGGTAATGCTAGACAAATCTGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131414773 66 + 190429646 TGCATACTTATTGCACTAATATTACTCCACAATCACAAACACTGGGTAATGTTAGACAAATCTGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130933776 66 + 189454096 TGCATACTTATTGCACTAATATTACTCCACAATCACAAACACTGGGTAATGCTAGACAAATCTGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34925573 66 - 40319822 TGCATACTTATTGCACCAATATTACTCCACAATCACAAACACTGGGTAATGCTAGACAAATCTGCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4479475 66 - 9219162 TGCATACTTATTGCACTAATATTACTCCACAATCACAAACACTGGGTAATGCTAGACAAATCTGCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79004384 66 + 135778131 TGCATACTTATTGCACTAATATTACTCCACAATCACAAACACTGGGTAATGCTAGACAAATCTGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2774141 66 - 3013352 TGCATACTTATTGCACTAATATTACTCCACAATCACAAACACTGGGTAATGCTAGACAAATCTGCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6003094 66 + 8656713 TGCATACTTATTGCACTAATATTACTCCACAAACACAAACACTGGGTAATGCTAGACAAATCTGCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129443046 66 - 190850796 TGCATACATATTTCACTAATATTACTCAGCAATCACAAGCATTGGGTAGTGCTAGATAAATCTGCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6517929 66 - 25294431 TGCATACTTATTTCACTAATATTACTCAGCAATCACAAGCATTGGGTAGTGCTAGATAAATCTGCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4072544 65 - 6311556 TGCATACTTATTTCACCAATATTACTCAGCAATCACAAGCATT-GGTAGTGCTAGATAAATATGCC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14928203 66 + 15034901 TGCATACTTATTTCACTAATATTACTCAGCAATCACAAGCATTGGGTAGTGCTAGATAAATCTGCC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26331927 66 - 93316391 TGCATAATTATTTTATTAATATCACTTAGCAATCACAAATATTGGACAATGCCAGACAAATCTGCA i micMur3.chr14 I 23 I 462 s otoGar3.GL873702 951337 66 - 3201129 tgcataattattttattaatattaCTTCATAATAACAAACTTTGGATAATGCCAGACAAATCTGCA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44055677 66 - 53741614 TGTGCACTGATTTTATTAATAATGCTTAGCAATCACAAACATTATATCATGCCAGAGAAATCTGAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1774257 66 + 5974691 TACATAATTATCTTATTAATATTACTTAGCAATCACAAGCATTGGATAATGCCAGAGAGATCTGCA i dasNov3.JH569232 C 0 C 0 e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=1138821.000000 s hg38.chr9_KI270719v1_random 53789 114 + 176845 AGAGGTACTGTTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCTGAAAGATACTTCTAGATGTTTTTTTCCATAACAGAGCAGATGATTTCTAAGTGT-TTATATCACTGAAACTT s panTro5.chr4 135078579 114 + 194502333 AGAGGTACCATTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCTGAAAGATACTTCTAGATGTTGTTTTCCATAACAGAGCAGACGATTTCTAAGTGT-TTATATCACTGAAACTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 58936 114 - 70559 AGAGGTACCGTTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCTGAAAGATACTTCTAGATGTTTTTTTCCATAACAGAGCAGACGATTTCTAAGTGT-TTATATCACTGAAACTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90472770 114 - 115148730 AGAACTACCATTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCTGAAAGATACTTCTAGATGTTTTCTTCAGTAACAGAGCAGACGATTCCTAAGTGT-TTATATCACTGGAACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131414839 114 + 190429646 AGAGGTAGCAGTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCCGCAAGATACTTCTAGATGTTTTCTGCAATAACAGAGCAGACAATTTCTAAGTGT-TTATATCACTGGAACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130933842 114 + 189454096 AGAGGTAGCAGTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCCGCAAGATACTTCTAGATGTTTTCTGCAATAACAGAGCAGACAATTTCTAAGTGT-TTATATCACTGGAACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34925639 114 - 40319822 AGAGGTAGCAGTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCCGCAAGATACTTCTAGATGTTTTCTGCAATAACAGAGCAGACAATTTCTAAGTGT-TTATATCACTGGAACTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4479541 114 - 9219162 AGAGGTAGCAGTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCCGCAAGATACTTCTAGATGTTTTCTGCAATAACAGAGCAGACAGTTTCTAAGTGT-TTATATCACTGGAACTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79004450 114 + 135778131 AGAGGTAGCAGTATTCCA-GCA-CCTTAAAAA-CATTTTTCCATTCGCAAGATACTTCTAGATGTTTTCTGCAATAACACAGCAGACAATTTCTAAGTGT-TTATATCACTGGAACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2774207 114 - 3013352 AGAGGTAGCAGTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCCGCAAGATACTTCTAGATGTTTTCTGCAATAACAGAGCAGACAATTTCTAAGTGT-TTATATCACTGGAACTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6003160 114 + 8656713 AGAGGTACCAGTATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCAGCAAGATACTTCTAGATGTTTTCTGCAATAACAGAGCAGACAATTTCTAAGTGT-TTATATCACTTGAACTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129443112 114 - 190850796 AGAGGTACCATAATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCTGCAAGATACTTCTAGATGTTTTCTTCAATGACAGAGCAGATGATTTCTAAGTGT-TTATATCACTGCAACTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6517995 114 - 25294431 AGAGGTACCATAATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCTGCAAGATACTTCTAGATGTTCTCTTCAATGACAGAGCAGATGATTTCTAAGTGT-TTATATCACTGCAACTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4072609 114 - 6311556 AGAGGCACCATAATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCTGCAAGATACTTCTAGGTGTTTTCTTCATTGACAGAGCAGATGATTTCTAAGTGT-TTATATCACTGCAACTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14928269 114 + 15034901 AGAGGTACCATAATTCCA-GCA-CCTTAAAAA-CATTTTTCAATCTGCAAGATACTTCTAGATGTTTTCTTCAATGACAGAGCAGGTGATTTCTAAGTGT-TTATATCACTGCAACTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 951403 116 - 3201129 TGCCATGTCTTTATTCCAGGCA-CCTGAAAAAGAAATTTTCTGCCTGAGAGATATTTCTACATGTTTTCTTCAATGAGAGAGTAGAACATCTCTACATGT-TTAAATAATTGAAACGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44055743 117 - 53741614 AAAGATACCATTAACATA-GAAGCCTTAAAAGGAAACTTTCAATCTGAGGGATATTTCTAAACATTTTCCTTAATGGGAGAATAGAAGTTTTATAAACGTATCAAATCACTGAAATTT i canFam3.chr19 C 0 I 11 s dasNov3.JH569232 1774323 92 + 5974691 AGAGACACCATTAACCTG-GGA-GTCT------TAATTTTCAGGCTGAGAGATACTCCTAGATACTTTTTTC-ACAAAAGAGCA-----------------TTATATCATTGAAGCTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=2215352.000000 s hg38.chr9_KI270719v1_random 53903 244 + 176845 CACAGTATTAGTGGAATATGTTATCCTTTATACCAAAAGTAAT-----CAGATTATTTTATAAAGCAATTATCAA-TTAAATATAGAttactaagaacatactgtataaaatgccttatgggctattaattc----tgcatgcattgccacatttgattatctc-aaaaaacctcctg-aaatatgtattcttaacaca-cttttattgaga------ttatgagtaataaaagttaaaagatt-ttcccaaagacgtacaagt s panTro5.chr4 135078693 247 + 194502333 CACAGTATTAGTGGAATATGTTATCCTTTATACCAAAAGTAAT-----GAGATTATTTTATAAAGCAATTATCAA-TTAAAAATAGAttactaagaacatactgtataaaatgccttatgggctattaattc----tgcatgcattgccacatttgattgtctc-aaaaaacctcctg-aaatatgtattcttaacaca-cttttattgaga---acattatgagtaataaaagttaaaagatt-ttcccaaagatgtacaagt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 59050 246 - 70559 CACAGTATTAGTGGAATATGTTATCCTTTATACCAAAAGTAAT-----CAGATTATTTTATAAAGCAATTATCAA-TTAAAAATAGAttactaagaacatactgtataaaatgccttatgggctattaattc----tgcatgcattgccacatttgattgtctc-aaaaaacctcctg-aaatatgtattcttaacaca-cttttattgaga---acattatgagtaataaaagttaaaagatt-ttcccaaagat-tacaagt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90472884 250 - 115148730 CACAGTATTAGTGGAATATGTTATCCTTTATACCAAAAGTAAT-----CAGATTATTTTATAAAGCAATTATCAA-TTAAAAATAGAttactaagaacatactgtataaaatgccttatgggctattaattc----tgcatgccttgccacatttgattgtctc-aaaaaacctcctg-aaatatgtattcttaacaca-cttttattgagaagaacattatgagtaataaaagttaaaagatt-ttcttaaagatgtacaagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131414953 250 + 190429646 CACAGTATTAGTGAAATGTGTCATCCTTTATGCTGAATGTAAT-----CAGATTATTTTATAAAGCAAATAGCAA-TTAAAAATAGAttactaagaacatactgtataaaatgccttatgggttattaattc----tgcatgcattgccacattcgattgtctc-aaaaaacctcctg-aaatatgtgttcttaacaca-cttttattgagaagaacattatgggtaatagaagttaaaagatt-ttcccaaagatgtacaagt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130933956 250 + 189454096 CACAGTATTAGTGAAATGTGTCATCCTTTATGCTGAATGTAAT-----CAGATTATTTTATAAAGCAAATAGCAA-TTAAAAATAGAttactaagaacatactgtataaaatgccttatgggttattaattc----tgcatgcattgccacattcgattgtctc-aaaaaacctcctg-aaatatgtgttcttaacaca-cttttattgagaagaacattatgggtaatagaagttaaaagatt-ttcccaaagatgtacaagt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34925753 250 - 40319822 CACAGTATTAGTGAAATGTGTCATCCTTTATGCTGAATGTAAT-----CAGATTATTTTATAAAGCAAATAGCAA-TTAAAAATAGAttactaagaacatactgtataaaatgccttatgggttattaattc----tgcatgcattgccacattcgattttctt-aaaaaacctcctg-aaatatgtgttcttaacaca-cttttattgagaagaacattatgggtaatagaagttaaaagatt-ttcccaaagatgtacaagt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4479655 250 - 9219162 CACAGTATTAGTGAAATGTGTCATCCTTTATGCTGAATGTAAT-----CAGATTATTTTATAAAGCAATTAGCAA-TTAAAAATAGAttactaagaacatactgtataaaatgccttatgggttattaattc----tgcatgcattgccacatttgattgtctc-aaaaaacctcctg-aaatatgtgttcttaacaca-cttttattgagaagaacattatgggtaatagaagttaaaagatt-ttcccaaagatgtacaagt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79004564 250 + 135778131 CACAGTATTAGTGAAATGTGTCATCCTTTATGCTGAATGTAAT-----CAGATTATTTTATAAAGCAATTAGCAA-TTAAAAATAGAttactaagaacatactgtataaaatgcctttagggttattaattc----tgcatgcattgccacatttgattgtctc-aaaaaacctcctg-aaatatgtgttcttaacaca-cttttattgagaagaacattatgggtaatagaagttaaaagatt-ttcccaaagatgtacaagt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2774321 250 - 3013352 CACAGTATTAGTGAAATGTGTCATCCTTTATGCTGAATGTAAT-----CAGATTATTTTATAAAGCAATTAGCAA-TTAAAAATAGAttactaagaacatactgtataaaatgccttatgggttattaattc----tgcatgcattgccacatttgattgtctcaaaaaaacctcctg-aaatatgtgttcttaacaca-cttttattgagaagaacattatgggtaatagaagtt-aaagatt-ttcccaaagatgtacaagt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6003274 250 + 8656713 CACAGTATTAGTGAAATGTGTCATCCTTTATGCTGAATGTAAT-----CAGATTATTTTATAAAGCAATTCGCAA-TTAAAAATAGAttactaagaacatactgtataaaatgccttatgagttattaatac----tgcatgcactgccacatttgattgtctc-aaaaaacctcctg-aaatatgtgttcttaacaca-cttttactgagaagaacattatgggtaatagaagttaaaagatt-ttcccaaagatgtgcaagt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129443226 249 - 190850796 CCAAGTATTAGTAGAATGTATCATTCTTTATACTGAAAGTAAT-----CAGATCTTTTAATAAAGCAATTATAAATTTAGAAATAGAttactaagaacatactgtataaaatgccttatgggtt----attc----tacatgcattgccacatttgattgtctc-aaaaaacctcctg-aaatatgtgttcctaacacattttttattaagtagaacattatgggtaatagaagttaaaagatttttcccaaagatgcacaagt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6518109 252 - 25294431 CCAAGTATTAGGAGAATGTATCATTCTTTATACTGAAAGTAAT-----CAGATTTTTTTATAAAGCAATTATAAATTTAGGAATAGAttactaagaacatactgtgtaaaatgccttatgggttattaattc----tacatgcattgccgcatttgattgtctc-caaaaacctcctg-aaagatgtgttcctaacaca-tttttattgagaagaacattatgggtaatagaagttaaaagattattcccaaagATGCacgagt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4072723 252 - 6311556 CCAAGTATTAGTAGAATGTATCATTCTTTATATTGAAAGTAAT-----CTAATTTTTTTATAAAGCAATTATAAATTTAGAAATAGAttactaagaacatactgtgtaaaatgccttatgggttattaattc----tacatgcattgccacatttgattgtctc-aaaaaacatcctg-aaatatgtgttcctaacaca-tttttattgagaagaacattatgggtaatagaagttaaaagattattcccaaagatgcacaagt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14928383 251 + 15034901 CCAAGTATTAGTAGAATGTATCATTCTTCATACTGAAAGTAAT-----CAGATTTTTT-ATAAAGCAATTATAAATTTAGAAATAGAttgctaagaacatactgtataaaatgccttatgggttattaattc----tacatacattgtcacatttgattttctc-aaaaatcctcctg-aaatatgtgttcctaacaca-tttttattgagaagaacattatgggtaatagaagttaaaagatttttcccaaagatgcacaagt i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 951519 166 - 3201129 CAGTGTATGAGTGGTATGTTCCATTCTTTCTATTAAAAATAATCTGCCCAGATTCTTTTATAAAACAACTGTCAA-TGAAAAATAGGTTATTG-----------------------------------------------------------------TCCTTC-TAAAAAT----------------------------GTATTAATGAAAAGAAAATTATGGG-ACTAGGAGTT-AAAGTTT-TTTCTAAGTATATATAAGT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1774415 245 + 5974691 GAGAGTATGAGTAGAATGCCCCATTCTTGCCATTATAAATATTCTATCCATGTTCTTTTATAAAGCAAA-ATCAA-TTAAAAATGTACTACTAATACCATact------------ttatgaattattaattcattttacatatattactacttttgattgcccc-caaaatttctctatacatatatatt-ttatcaca-aatttactgagaaggaaaatatgagtaatagaagttaaaagat--ttgctaaaatcatgcaagt i dasNov3.JH569232 C 0 I 173 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055860 11 - 53741614 I a score=3644983.000000 s hg38.chr9_KI270719v1_random 54147 439 + 176845 aaaacaggtcctcaaataaagttgttttgttcaatgatgtttcgctataatgtagatgag-aat-aaatattgattcctggacagggctaccatctgtgtagggtctgcatgttctccccatg----cctgcatggg-----ttttctccaggaactcctgcttcctctcacatccccaagatgtgcatgtctggttaattggcattt----ccccactgt--gtgtccccatgtgagtgaatgtggttgtgccctgccatggaatagcatcctgtgcagggtttattcctgcattgcatgttgag---taagaataggctcttgctacccgagactctgaactggaataattgggtaaataatcatc-ttacttgtttttattaatctttttaaaaatgtatgtatacctcacacttatttcagtgttgaatgttttaagtgttttagtcttcatttag s panTro5.chr4 135078940 439 + 194502333 aaaacaggtcctcagataaagttgttttgttcaatgttgttttgctataatgtagatgag-aat-aaatattgattcctggacagggctaccgtctgtgtagggtccacatgttctccccatg----cctgcatggg-----ttttctccaggaactcctgcttcctcccacatccccaagatgtgcatgtctggttaattcgcatgt----ccccactgt--gtgtcccaatgtgagtgaatgtggtcatgccctgccatggaatagtatcctgtgcagagtttgttcctgcattgcatgctgag---taagaataggctcttgccacccgagactctgaactggattaattgggtaaataatcatc-ttacttgtttttattactctttttaaaaatgtatatatacctcacacttatttcaatgttgaatgttataagtgttttagtcttcatttag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 59296 438 - 70559 aaaacaggtcctcaaataaagttgttttgttcaatgttgttttgctataatgtagatgag-aat-aaatattgattcctggacagggctaccatctgtgtagggtctgcatgttctccccatg----cctgcatggg-----ttttctccaggaactcctgcttcctctcacatccccaagatgtgcatgtctggttaattggcattt----ccccactgt--gtgtcccaatgtgagtgaatgtggttgtgccctgccatggaatagcatcctgtgcagggtttattcctgcattgcatgctgag---taagaataggctcttgccacccgagactctgaactggaataattgggtaaataatcatc-ttacttgtttttattaatctttttaaaaatgtatgtatacctcacacttatttcag-gttgaatgttataagtgttttagtcttcatttag i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90473134 434 - 115148730 aaaacaggtcctcaaataaagttgttttgttcaatgttgttttgctataatgtagatgag-aat-aaatattgattcctggacagggctaccgtctgtgtagagtccgcatgttctccccatg----cctgcatggg-----ttttctccaggaactcctgtttcctctcacatccccaagatgtgcatgtctggttaattggcattt----ccccactgt--gtgtcccagtgtgagtgaatgtggttgtgccctgccatggaataggatcctgtgcagggtttgttcctgcattgcatgctgag---taagaataggctcttgccaccagagactctgaactgggataattgggtaaatactcatc-taacttgtttttattaatatttttaaaaatgtatgtatacctcacatttatttcaatgttgaa-----taagtgttttagtcttcatttag i nomLeu3.chr7b C 0 I 314 s rheMac8.chr5 131415203 435 + 190429646 aaaaaaggtcctcaaataaagttgttttgttcaatattgttttgctataacgtagatgag-aat-aaacattgattcctggacagggttaccgtctgtgtagagtctgcatgttctccccatg----tctatatggg-----ttttccccaggaactcctgtttcttctcacatccccaagatgtgcaagtctggttaattggcattt----tcccactgt--gtgtcccaatgtgagtgaatgtggttatgccctgccatggaatagcatcctgtccagggtttgttcctgcattgcatactgag---taagaataggctcttgccacccgagactctgaactggaataattgggtaaacaatcatc-ttacttgtttttattaatctttttaaaaatgtatgtacacctcacacttatttcaatgttcaacgtt----gtgttttagtcttcgtttag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130934206 435 + 189454096 aaaaaaggtcctcaaataaagttgttttgttcaatgttgttttgctataacgtagatgag-aat-aaacattgattcctggacagggttaccgtctgtgtagagtctgcatgttctccccatg----tctgtatggg-----ttttccccaggaactcctgtttcttctcatatccccaagatgtgcaagtctggttaagtggcattt----ctccactgt--gtgtcccaatgtgagtgaatgtggttatgccctgccatggaatagcatcctgtccagggtttgttcctgcattgcatactgag---taagaataggctcttgccacccgagactctgaactggaataattgggtaaacaatcatc-ttacttgtttttattaatctttttaaaaatgtatgtacacctcacacttatttcaatgttcaacgtt----gtgttttagtcttcgtttag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34926003 435 - 40319822 aaaaaaggtcctcaaataaagttgttttgttcaatgttgttttgctataacgtagatgag-aat-aaacattgattcctggacagggttactgtctgtgtagagtctgcatgttctccccatg----tctgtatggg-----ttttccccaggaactcctgtttcttctcacatccccaagatgtgcaagtctggttaattggcattt----ccccactgt--gtgtcccaatgtgagtgaatgtggttatgccctgccatggaatagcatcctgtccagggtttgttcctgcattgcatactgag---taagaataggctcttgccacccgagactctgaactggaataattgggtaaacaatcatc-ttacttgtttttattaatctttttaaaaatgtatgtacacctcacacttatttcaatgttcaacgtt----gtgttttagtcttcgtttag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4479905 436 - 9219162 aaaaaaggtcctcaaataaagttgttttgttcaatgttgttttgctataacgtagatgag-aat-aaacattgattcctgtacagggttaccgtctgtgtagagtctgcatgttctccccatg----tctgtatggg-----ttttccccaggaactcctgtttcttctcacatccccaagatgtgcaagtctggttaattggcattt---cccccactgt--gtgtcccaatgtgagtgaatgtggttatgccctgccatggaatagcatcctgtccagggtttgttcctgcattgcatactgag---taagaataggctcttgccacccgagactctgaactggaataattgggtaaacaatcatc-ttacttgtttttattaatctttttaaaaatgtatgtacacctcacacttatttcaatgttgaacgtt----gtgttttagtcttcgtttag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79004814 435 + 135778131 aaaaaaggtcctcatataaagttgttttgttcaatgttgttttgctataaagtagatgag-aat-aaacattgattcctggacagggttatcatctgtgtagagtctgcatgttccccccatg----tctgtatggg-----ttttccccaggaactcctgtttcctctcacatccccaagatgtgcaagtctggttaattgacattt----ccccactgt--gtgtcccaatgtgagtgaatgtggttgtgccctgccatggaatagcatcctgtccagggtttgttcctgcattgcatactgag---taagaataggctcttgccacccgagactctgaactggaataattgggtaaacaatcatc-ttacttgcttttattaatcttttttaaaatgtatgtacacctcacacttatttcaatgttgaacgtt----gtgttttagtctttgtttag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2774571 432 - 3013352 aaaaaaggtcctcaaataaagttgttttgttcaatgttgttttgctataacgtagatgag-aat-aaac--tgattcctggacagggttacaatctgtgtagagtctgcatgttctccccatg----tctgtatggg-----ttttccccaggaactcctgtttcttctcacatccccaagatgtgcaagtctggttaattggcattt----ccccactgt--gtgtcccaatgtgagtgaatgtggttatgccctgccatggaatagcatcctgtccagggtttgttcctgcattgcatactgag---taagaataggctcttgccacccgagactctgaactggaataattgggtaaacagtcatc-ttacttgtttttattaatc-ttttaaaaatgtatgtacacctcacacttatttcaatgttgaacgtt----gtgttttagtcttcgtttag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6003524 435 + 8656713 taaaaaggtcctcaaataaagttgttttgtccagtgttgttttgctataacgtagatgag-aat-aaacattgattcctggacagggctaccgtctgtgtagagtctacatgttttccccata----tctgtatggg-----ttttccccaggaactcctgtttcctctcacatccccaagatgtgcaagtctggttaattggcattt----ccccactgt--gtgtcccaatgtgagtgaatgtggttgtgccctgccatggaatagcatcctgtccagggtttgttcctgcattccatactgag---taagaataggctcttgccacccgagactctgaactggaaaaagtgggtaaataatcatc-ttacttgtttttattaatctttttaaaaatgtatgtatacctcacatttatttcaatgttgaacgtt----gtgttttaatcttcgtttag i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129443475 442 - 190850796 aaaacagattctcaaataaagttgtattgttcaatcttgttttgctataacgtagatgag-aaaaaaatagtgattgctggacagggccaccatctggggagagtcttcatgttctccccatgcaaatctgcatggg------tttctccaggaatgcctgcttcctctcgcatccccaagatgtgcatgtctggttaattggca-tt----tcccactgtgagtttcccattgtgagtgaatgtggttgtgccccgccatggaattgcatcttgtctggggtttcttcctgcattgcaggctgag---taacaacaggctcttgccaccccagacactgaaccgaaatcattgagtaaataatcatc-ttacttgtttttattaatc-tttaaaaaatgtatgtatacttcacatttatttcaatgttcaatattatatgtgttttagtcttcattag- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6518361 444 - 25294431 aaagcagg-tctcaaataaagttgttttgttcaatcttgttttgctataatgtagatcagaaaaaaaatcatgattgctggacagggtcgctgtctgtggagagtcctcatgttctccccatgcatgtctgcatggg-----ttttctccaggaacgcctgcctcctctcacatccccaagatgtgcatgtctggttaattggcattt----tcccactgtgagtttcccattgcgagtgaatgtggttgtgccctgccatggaattgcatcttgtccagggtttcttcctgcattgcaggtgtag---tgacaacaggctcttgccaccccagacactgaaccaaaataattgagtaagtaatcatc-ttacttgttttcattaatc-tttaaaaaatgtatgtatgcttcacatttatttcaatgttcagtattatataggttttagtcttcattag- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4072975 439 - 6311556 aaagcaggttctc----aaagttgttttgttcaatcttgttttgccataatgtagattgg-aataaaatagtgattgctggaaaggg-caccatctatggagagtcctcatgttctccccatgcatgtctgcatggg-----ttttttccaggaacgcctgcttcctctcacatccccaagatgtgcatgtctggttaattggcattt----ccctgctgtgagtttcccattgtgagtgaatgtggttgtgccctgccatggaattgcatcttgtccagggtttcttcctgcattgcaggctgag---taacaacaggctcttgccaccccagacaatgaactgaaataattgagtaaataatcatc-ttacttgttttcattaatc-tttaaaaaatgtatgtatacttcacatttatttcaatgttcaatattatatgtgttttagtctttattag- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14928634 443 + 15034901 aaaacaggttctcaaataaagttgttttgttcaatcttgttttgctataatgtagatgag-aaaaaaatagtgattcctggacagggccac-gtctatggagagtcctcatgttctccccatgcatgtctgcatggg-----ctttctccaggaacgcctgcttgctctcacatccccaagatgtgcatgtctggttcattggcattt----ccccactgtgagtttcccattgtgaatgaatgtggttgtgccctgcagtgaaattgcatcttgtccagggtttcttcctgcatcgcaggctgag---taacaacaggctcttgccaccccagacacttaaccgaaataattgagtaaataatcatc-ttacttgttttcattaatc-tttaaaaaatgtatgtatacttcacatttatttcaatgttcaatattatatgtgttttagtcttcattag- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 951685 435 - 3201129 Acagcagttcctcaaataatgtcatttcatttaacatcagttc-ttataatgttgataag-agaaaaacattgattcctggtcagagcctctgtctatgtgctgcttgctcattctcc---------tatgtgcgagcgtatttttctctgagctttccag--tcttctcacatcccc-gtatgtggacatcaggataattagcatgtgttattgctccat--ttgaacaagcctgggtg--tgtgagtgtaccctgggagggaatggtgttctatccagggctgcatccagccttgcactctcagctcctggggtaggctttgattgtctgagacctagaactggaat-attgaatcaacaatcatcaccattcatttttattaatttt-----aaatgtatgcacaacatacatttgtatcaatattcaatgttagaaatg-tctgttctttatatag i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055860 11 - 53741614 I a score=678712.000000 s hg38.chr9_KI270719v1_random 54586 80 + 176845 aagtacagtga---taatattgtgaccagaaatatgcagtaggaacttatatattg-ttttatcaattggcctatggtaaaatt s panTro5.chr4 135079379 80 + 194502333 aagtacagtga---taatattgtgaccagaaatatgcagtaggaacttaactcttg-ttgtatcaattggcctatggtaaaatt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 59734 80 - 70559 aagtacagtga---taatattgtgaccagaaatacgcagtaggaacttaactcttg-ttgtatcaattggcctatggtaaaatt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90473882 80 - 115148730 aagtacagtga---taatattgtgaccagaaatacgccataggaacttaactcttg-ttgtatcacttggcctatggtaaaatt i nomLeu3.chr7b I 314 C 0 s rheMac8.chr5 131415638 80 + 190429646 aagtacagtga---taatattatgaccagaaatatgccatatgaacttaagtcttg-ttgtaccaattggcctgtggtaaaatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130934641 80 + 189454096 aagtacagtga---taatattatgaccagaaatatgccatatgaacttaagtcttg-ttgtaccaattggcctgtggtaaaatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34926438 80 - 40319822 aagtacagtga---taatattatgaccagaaatatgccatatgaacttaagtcttg-ttgtaccaattggcctgtggtaaaatt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4480341 80 - 9219162 aagtacagtga---taatattatgaccagaaatatgccatatgaacttaagtcttg-ttgtaccaattggcctgtggtaaaatt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005249 80 + 135778131 aagtacagtga---taatattataaccagaaatatgccatatgaacttaagtcttg-ttgtaccaattggcctgtggtaaaatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775003 80 - 3013352 aagtacagtga---taatattatgaccagaaatatgccatatgaacttaagtcttg-ttgtaccaattggcctgtggtaaaatt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6003959 80 + 8656713 aagtgcagtga---taatatcattaccagaaatatgccatatgaacttaagtcttg-ttgtaccaattggcctgtggtaaaatt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129443917 80 - 190850796 gagttcagtga---caatattgtaacaagaaatacgccatagcaacttaaatctcg-ttgtatcagttagcctatggtaaaatt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6518805 80 - 25294431 aagttcagtga---taatattgcaacacgaaatatgccatagcaacttaactcttg-ttgtgtcaattagcctatggtaaaatt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4073414 80 - 6311556 gagttcagtga---taatattgtaacaggaaatatgccatagcaacttaactcttg-ttgtataaattagcctatggtaaaatt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14929077 80 + 15034901 gagttcagtga---taatatcgtaacaggaaatatgccatagcaacttaactcttg-ttgcatcaattagcctatggtaaaatt i aotNan1.NW_018507635v1 C 0 I 331 s otoGar3.GL873702 952120 83 - 3201129 aagtttggtgatttttttcttatggctagaaatatgctgtaggaagttaactcttgtttatatcaattagtctatgtaaatgt- i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055860 11 - 53741614 I a score=78258.000000 s hg38.chr9_KI270719v1_random 54666 15 + 176845 tgtttcattgttcac s panTro5.chr4 135079459 15 + 194502333 tgtttcattgttcac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 59814 15 - 70559 tgtttcattgttcac i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90473962 15 - 115148730 tgtttcattgttcac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131415718 15 + 190429646 tgtttaattgttcac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130934721 15 + 189454096 tgtttaattgttcac i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34926518 15 - 40319822 tgtttaattgttcac i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4480421 15 - 9219162 tgtttaattgttcac i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005329 15 + 135778131 tgtttaattgttcac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775083 15 - 3013352 tgtttaattgttcac i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004039 15 + 8656713 tgtttaattgttcac i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129443997 11 - 190850796 cgttttattgt---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6518885 11 - 25294431 cattttattgt---- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4073494 11 - 6311556 cattttattgt---- i cebCap1.NW_016107420v1 C 0 C 0 s otoGar3.GL873702 952203 15 - 3201129 gggtttattatatgt i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055860 11 - 53741614 I e aotNan1.NW_018507635v1 14929157 331 + 15034901 I a score=1381376.000000 s hg38.chr9_KI270719v1_random 54681 167 + 176845 cattttgctgatagttgcagtttccaataatctact---gatattaaatgtggacttactatgtaaacaatagcaaggatcctaaatcctaggttaca----tctaagtttaaaTGG--CTTGACACCATGTCAGAATTGCCTT---ATCACCAT-GCTCTTATAAGTGTTTCATTTTTT s panTro5.chr4 135079474 167 + 194502333 cgttttgcttatagttgcagtttccaataatctact---gacattaaatgtggacttactatgtaaacaatagcaaggatcctaaatcctaggttata----tctaagtttaaaTGG--CTTGACACCATGTCAGAATTGCCTC---ATGAGCAT-GCTCTTGTAAGTGTTTCATTTTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 59829 166 - 70559 c-ttttgctgatagttgcagtttccaataatctact---gacattaaatgtggacttactatgtaaacaatagcaaggatcctaaatcctaggttata----tctaagtttaaaTGG--CTTGACACCATGTCAGAATTGCCTT---ATGACCAT-GCTCTTATAAGTGTTTCATTTTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90473977 166 - 115148730 cattttgcttataattac-gtttccaataatctcca---gatattaaatgaggacttactatgtaaacaatagtgaggatcctaaatcctaggttata----tctaagtttaaatgg--cttgacaccacatcagaattgcctT---ATGACCAT-GCTCTTATAAGTGTTTCATTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131415733 170 + 190429646 cattttgcttatagttttagtttccaataatctatt---gacattaaatgaggacttaccgtgtaaacaatagcaaggatcctaaatcttaggttata----tctaagtttaaaTGG--CTTGACATCATGTCAGAATTGCCTTATTATGACCAT-GCTCTTATAAGTGTTTCATTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130934736 170 + 189454096 cattttgcttatagttttagtttccaataatctatt---gacattaaatgaggacttactgtgtaaacaatagcaaggatcctaaatcttaggttata----tctaagtttaaaTGG--CTTGACATCATGTCAGAATTGCCTTATTATGACCAT-GCTCTTATAAGTGTTTCATTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34926533 170 - 40319822 cattttgcttatagttttagtttccaataatctatt---gacattaaatgaggacttactgtgtaaacaatagcaaggatcctaaatcttaggttata----tctaagtttaaaTGG--CTTGACATCATGTCAGAATTGCCTTATTATGACCAT-GCTCTTATAAGTGTTTCATTTTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4480436 172 - 9219162 cattttgcttatagttttagtttccaataatctatt---gacattaaatgaggacttactgtgtaaacaatagcaaggatcctaaatcttaggttata----tctaagtttaaaTGGGTCTTGACATCATGTCAGAATTGCCTTATCATGACCAT-GCTCTTATAAGTGTTTCATTTTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005344 170 + 135778131 cattttgcttatagttttactttccaataatctatt---gacattaaatgaggacttactgtgtaaacaatagcgaggatcctaaatcctaggttata----tctaagtttaaaTGG--CTTGACATCATGTCAGAATTGCCTTATTATGACCAT-GCTCTTATAAGTGTTTCATTTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775098 170 - 3013352 cattttgcttatagttttagtttccaataatctatt---gacattaaatgaggacttactgtgtaaacaatagcaaggatcctaaatcttaggttata----tctaagtttaaaTGT--CTTGACATCATGTCAGAATTGCCTTATTATGACCAT-GCTCTTATAAGTGTTTCATTTTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004054 170 + 8656713 cattttgcttatagtttcagtttccaataatctatt---tacattaaataaggacttactgtgtaaacaatagcaaggatcctaaatcctaggttata----tctaagtttaaaTGG--CTTGACATCATGTCAGAATTGCCTTATTATGACCAT-GCTCTTATAAGTGTTCCGTTTTAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444008 165 - 190850796 cattttg-ttagagttgcagt--ccaataatctatt---gacattaaatgaggactta---tgtatatgatagcaaggatcctaaatcctaggctata----tctaagtttaaaTGG--CTTGACACCATGTCAGAAGTGCCTTATTATGACCCTGGTTCTTATAAGTGTTTTGTTTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6518896 144 - 25294431 cattttgcttagagttgcagt---caataatctatt---gacattaaatgag------------------------gGATCCTAAATCCTAGGCTATA----CCTTAATTTAAACGG--CTTGATGCCATGTCAGAATTGTCTTATTATGACTCTGGTTCTTATAAGTGTTTTATTTTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4073505 166 - 6311556 cattttgctaagagttgcagt--ccaataatctatt---gacattaaatgaggactta---cgtatacaatagcaaggatcctaaatcctaggctata----tctaagtttaaaTGG--CTTGACACCATGTCAGAATTGCCTTATTATGACCCTGGTTCTTATAAGTGTTTTATTTTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14929488 166 + 15034901 cattttgcttagagttgcagt--ccaataatctatt---gacattaaatgaggactta---tgtatacaatagcaaggatcctaaatcctaggctata----actaagtttaaaTGG--CTTGACACTATGTCAGAATTGCCTTATTATGACCCTGGTTCTTATAAGTGTTTTATTTTTT i aotNan1.NW_018507635v1 I 331 C 0 s otoGar3.GL873702 952218 175 - 3201129 ccttttgttcaaagtcatagtttttaagaatttattgaagacatttagtgaggtcttac--tgCATATGAGAGTAAGGACCCTCAAATGCAGGCTTTCTCATTCCGAGTTTAAGCAG--CTTGAAGTCCTGTTAG-ATTGCCTTATAGTGACCCAGGCCCTCATGAGTGtttccttttct i otoGar3.GL873702 C 0 I 77 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055860 11 - 53741614 I a score=1427580.000000 s hg38.chr9_KI270719v1_random 54848 178 + 176845 AAAACAGTGCAAACTGA-ATTTTGCATGAGAATTATCATTA-AAAAAttttttgttacagataggatcttgctatgttgcccaggttgaccttgaagttctgggttcaaatgatccttttgcctcagcatccagtgtacctgggactacaactgtgtgccaccatacccagGGCTGCAGG s panTro5.chr4 135079641 178 + 194502333 AAAACTGTGCAAACTGA-ATTTTGCAAGAGAATTACCATTA-AAAAAAtttttgttacagataggatcttgctatgttgcccaggttgaccttgaagttctgggttcaaatgatccttttgcctcagcgtccagtgtacctgggactacaaccgtgtgccaccacacccagGGCTGCAGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 59995 177 - 70559 AAAACAGTGCAAACTGA-ATTTTGCATGAGAATTATCATTA-AAAAA-tttttgttacagataggatcttgctatgttgcccaggttgaccttgaagttctgggttcaaatgatccttttgcctcagcgtccagtgtacctgggactacaactgtgtgccaccatacccagGGCTGCAGG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474143 176 - 115148730 AAAACAGTGCAAACTGA-ACTTTGCATGA-AATCATCATTA-AAAAAAtttttgttac-gataggatcttgctatgttgcccaggttgaccttgaagttctgggttcaaatgatccttttgcctcagcgtccagtgtacctgggactacaagtgtgtgccaacacacccagGGCTGCAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131415903 177 + 190429646 AAAATAGCACAAACTGA-ATTTTGCATGAGAATTATCATTA-ATAAt-tttttggtacagatgggatctcgctatgttgcccaggttgatcttgaagttctgggtttaaatgatccttctgcctcagcgtccagtgtagctgggactataaccatgtgtcaccacacccagGGCTGCAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130934906 177 + 189454096 AAAACAGCACAAACTGA-ATTTTGCATGAGAATTATCATTA-ATAAt-tttttggtacagatgggatctcgctatgttgcccaggttgaccttgaagttctgggtttaaatggtccttctgcctcagcgtccagtgtagctgggactataaccatgtgtcaccacacccagGGCTGCAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34926703 177 - 40319822 AAAACAGCACAAACTGA-ATTTTGCATGAGAATTATCATTA-ATAAt-tttttggtacagatgggatctcgctatgttgcccaggttgaccttgaagttctggatttaaatggtccttctgcctcagcgtccagtgtagctgggactataaccatgtgtcaccacacccagGGCTGCAGG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4480608 177 - 9219162 AAAACAGCACAAACTGA-GTTTTGCATGGGAATTATCATTA-ATAAt-tttttggtacagatgggatctcgctatgttgcccaggttgaccttgaagttctgggtttaaatggtccttctgcctcagcgtccagtgtagctgggactataaccatgtgtcaccacacccagGGCTGCAGG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005514 177 + 135778131 AAAACAGCATAAACTGA-ATTTTGCATGAGAATTATCATTA-ATAAt-tttttggtacagatgggatatcgctatgttgcccaggttgaccttgaagttctgggttcaaatggtccttctgcctcagcgtccagtgtaactgggactataaccatgtgtcaccacacccagGGCTGCAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775268 177 - 3013352 AAAACAGCACAAACTGA-ATTTTGCATGAGAATTATCATTA-ATAAt-tttttggtacagatgggatctcactatgttgcccaggttgaccttgaagttctgggtttaaatggtccttctgcctcagcgtccagtgtagctgggactataaccatgtgtcaccacacccagGGCTGCAGG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004224 177 + 8656713 AAAACAGCACAAACTGA-ATTTTGCATGAGAATTACCATTA-AAAtt-tttttggtacagatgggatcttgctctgttgcccaggttgaccttgaagttctgggttcaaatggtccttctgcctcagcgtccagtgtagttgggactataaccatgtgtcaccacacccagGGCTGCAGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444173 177 - 190850796 AAGACAGCACGAACTGAGGTTTTGCATGAGAATTCTCATTT-AAAAA-ACTTTGTTACACGTgggatcttgctgtgttgcccaggttgaccttgaagttctgggtccaaatgatccttttgcctcagcgtccagtgtagctgggactacaact-tgtgccaccacactcagGGCTTCAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519040 179 - 25294431 AAGACAGCACAAACTGAGGTTTTGCATGAGAATTATCATTTAAAAAA-ACtttgttacacatgggatcttgctgtgttgcccaggttgaccttgaagttctgggtccaaatgatccttttgcctcagcgtccagtgtagctgggactacagctgtgtgccaccacactcagGGCTTCAGG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4073671 178 - 6311556 AAGACAGCACAAACTGAGGTTTTGCATGAGAATTATCACTC-AAAAA-ACTTTGCTACACGTgggtccttgctgtgttgcccaggttgaccttgaagttctgggtccaaatggtccttttgcctcagtgtccagcgtagctgggactacaactgtgtgccgccacactcagGACTTCAGG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14929654 178 + 15034901 AAGACAGCACAAACTGAGGTTTTGCATGACAATTATCATTT-AAAAA-ACtttgttacacatggaatcttgctgtgttgcccaggttggccttgaagttctgggtccaaattatccttttgcctcagcgaccagtgtagctgggactacaactgtgtgccaccacactcagGGCTTCAGG i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055860 11 - 53741614 I e otoGar3.GL873702 952393 77 - 3201129 I a score=815037.000000 s hg38.chr9_KI270719v1_random 55026 92 + 176845 AAAAGTTGTTACGTAAAGCAGTGATTTATGAAAATAAGACTTTATTTGGGCAACAT--AGAAAATGTAAAC-AA-AAAGAGTTGCTCAACATAAAA s panTro5.chr4 135079819 92 + 194502333 AAAAGTTGTTACGTAAAGCAGTGATTTATGAAAATAAGACTTAATTTGGGCCACAT--AGAAAATGTAAAC-AA-AAAGAGTTGCTCAACATAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60172 92 - 70559 AAAAGTTGTTACATAAAGCAGTGATTTATGAAAATAAGACTTTATTTGGGCAACAT--AGAAAATGTAAAC-AA-AAAGAGTTGCTCAACATAAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474319 92 - 115148730 AAAAGTTGTTACGTAAAGCAGTGATTTATGAAAATAAGACTTTATTTGGGCAACAT--AGAAAATGTAAAC-AA-GAAGAGTTGCTCAACATAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416080 93 + 190429646 AAAAGTTGTTACATAAAGCAGTGTGTTATGAAAATAAGCCTTTATTTGGGCAACAT--AGAAAATGTAAACAAA-AAAGAGTTGCTCAACATAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935083 93 + 189454096 AAAAGTTGTTACATAAAGCAGTGTGTTATGAAAATAAGCCTTTATTTGGGCAACAT--AGAAAATGTAAACAAA-AAAGAGTTGCTCAACATAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34926880 93 - 40319822 AAAAGTTGTTACATAAAGCAGTGTGTTATGAAAATAAGCCTTTATTTGGGCAACAT--AGAAAATGTAAACAAA-AAAGAGTTGCTCAACATAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4480785 93 - 9219162 AAAAGTTGTTACATAAAGCAGTGTGTTATGAAAATAAGCCTTTATTTGGGCAACAT--AGAAAATGTAAACAAA-AAAGAGTTGCTCAACATAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005691 93 + 135778131 AAAAGTTGTTACATAAAGCAGTGTGTTATGAAAATAAGCCTTTATTTGGGCAACAT--AGAAAATGTAAACAAA-AAAGAGTTGCTCAACATAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775445 93 - 3013352 AAAAGTTGTTACATAAAGCAGTGTGTTATGAAAATAAGCCTTTATTTGGGCAACAT--AGAAAATGTAAACAAA-AAAGAGTTGCTCAACATAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004401 93 + 8656713 AAAAGTTGTTACATAAAACAGTGAGTTATGAAAATAAGCCTTTATTTGGGCAACAT--AGAAAACGTAAACAAA-AAAGAATTGCTCAACATAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444350 93 - 190850796 AAAAGTTATGACATTAAGCAATGACTTATAAAAATAAGACTTTATTTGGGCAACAT--AGAAAATGTAAACAAA-AAGGAGTTGCTCAAAATCAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519219 91 - 25294431 AAAAGTTATTACATTAAGTAATGAC--ATAAAAATAAGACTTTATTTGGGCAACAC--AGAAAATGTAAACAAA-AAGGAGCTGCTCAAAATAAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4073849 92 - 6311556 AAAAGTTATTACATTAAGCAATGACTTATAAAAATAAGA-TTTATTTGGGCAACAT--AGAAAATGTAAACAAA-AAGGAGCTGCTCAAAATAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14929832 93 + 15034901 AAAAGTTATTACATTAAGTAATGACTTATAAAAATAAGACTTTATTTGGGCAACAT--AGAAAATGTAAACAAA-AAGGAGCTGCTGAAAATAAAA i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44055871 96 - 53741614 AAAGATCCTTACATAAAGCAGTGATTTGTGGGAATAAGACTTGATTTGGGCAACATAAAAAAAATGTTAACAAGTAAATATACAATCAAGAAAAAA i canFam3.chr19 I 11 T 104 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e otoGar3.GL873702 952393 77 - 3201129 I a score=416795.000000 s hg38.chr9_KI270719v1_random 55118 59 + 176845 CTTACTCAAGTCACAA-TTTACCTCTGACATGACATATTTCCATCCACTTCAG-------------AAA-AAAA-- s panTro5.chr4 135079911 59 + 194502333 CTTACTCAAGTCACAA-TTTACCTCTGACATGACATATTTCCATCCACTTCAG-------------AAA-AAAA-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60264 59 - 70559 CTTACTCAAGTCACAA-TTTACCTCTGACATGACATATTTCCATCCACTTCAG-------------AAA-AAAA-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474411 60 - 115148730 CTTACTCAAGTCACAA-TTTACCTCTAACATGACATATTTCCATCCACTTCAG-------------AAACAAAA-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416173 65 + 190429646 CTTACTCAAGACACAATTTTACCTCTGACATGACATATTTCCATCCACTTCAG--------AAAAAAAA-AAAA-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935176 63 + 189454096 CTTACTCAAGACACAATTTTACCTCTGACATGACATATTTCCATCCACTTCAG----------AAAAAA-AAAA-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34926973 66 - 40319822 CTTACTCAAGACACAATTTTACCTCTGACATGACATATTTCCATCCACTTCAG-------AAAAAAAAA-AAAA-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4480878 66 - 9219162 CTTACTCAAGACACAATTTTACCTCTGACATGACATATTTCCATCCACTTCAG-------AAAAAAAAA-AAAA-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005784 73 + 135778131 CTTACTCAAGACACAGTTTTACCTCTGACATGACATATTTCCATCCACTTCAGaaaaaaaaaaaaaaaa-aaaa-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775538 64 - 3013352 CTTACTCAAGACACAATTTTACCTCTGACATGACATATTTCCATCCACTTCAG---------AAAAAAA-AAAA-- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004494 66 + 8656713 CTTACTCATGTCACAATTTTACCTCTGACATGACATATTTCCATCCACTTCAG-------AAAAAAAAA-AAAA-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444443 59 - 190850796 CTTACTTAAGTCACAATTTTACCACCGACAGGACATGTTTCCATACACTTCAG--------------AA-AAAA-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519310 59 - 25294431 CTTACTTAAGTCACAATATTACCACTGACAAGACATGTTTCTATACATTTCAG--------------AA-AAAA-- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4073941 60 - 6311556 CTTATTTAAGTGACAATTTTACCACTGACAAGACATGTTTCTATACACTTCAG--------------AA-AAAAA- i cebCap1.NW_016107420v1 C 0 I 206 s aotNan1.NW_018507635v1 14929925 56 + 15034901 C----TTAAGTCACAATTTTACCACTGACAAGACATGTTTCTATACGCTTCAG--------------AA-AAAA-A i aotNan1.NW_018507635v1 C 0 I 96 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T e otoGar3.GL873702 952393 77 - 3201129 I a score=23168.000000 s hg38.chr9_KI270719v1_random 55177 6 + 176845 ATGTGT s panTro5.chr4 135079970 5 + 194502333 -CGTGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60323 6 - 70559 ATGTGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474471 6 - 115148730 ACGTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416238 6 + 190429646 AAGTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935239 6 + 189454096 AAGTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927039 6 - 40319822 AAGTGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4480944 6 - 9219162 AAGCGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005857 6 + 135778131 aaGCGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775602 6 - 3013352 AAGCGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004560 6 + 8656713 AAGTGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444502 6 - 190850796 ATGTGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519369 6 - 25294431 ATGTGA i saiBol1.JH378129 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e nasLar1.chr5 118963115 36150 + 174288623 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T e otoGar3.GL873702 952393 77 - 3201129 I e aotNan1.NW_018507635v1 14929981 96 + 15034901 I e cebCap1.NW_016107420v1 4074001 206 - 6311556 I a score=20632.000000 s hg38.chr9_KI270719v1_random 55183 5 + 176845 ATACc s panTro5.chr4 135079975 5 + 194502333 ATACC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60329 5 - 70559 ATACC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474477 5 - 115148730 ATACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416244 5 + 190429646 Gtatc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935245 5 + 189454096 Gtatc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927045 5 - 40319822 GTAtc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4480950 5 - 9219162 GTATC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005863 5 + 135778131 Gtatc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775608 5 - 3013352 GTATC i manLeu1.NW_012103277v1 C 0 C 0 s nasLar1.chr5 118999265 3 + 174288623 --AAG i nasLar1.chr5 I 36150 N 0 s colAng1.NW_012114544v1 6004566 5 + 8656713 GTATC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444508 5 - 190850796 ATACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519375 5 - 25294431 ATACT i saiBol1.JH378129 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T e otoGar3.GL873702 952393 77 - 3201129 I e aotNan1.NW_018507635v1 14929981 96 + 15034901 I e cebCap1.NW_016107420v1 4074001 206 - 6311556 I a score=234780.000000 s hg38.chr9_KI270719v1_random 55188 73 + 176845 -tttttatttc-tttttttct-tttctttcCGtttttttttttttttttttttttttAGAc--------------------gggctggagtgcagt-------- s panTro5.chr4 135079980 67 + 194502333 -TTTTTATTTC-TTtttttct-tttcttccc------cctttttttttttttttttgagac--------------------gggctggagtgcagt-------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60334 68 - 70559 -TTTTTATTTC-TTTTTTTCt-tttctttcc-----tttttttttttttttttttttagac--------------------gggctggagtgcagt-------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474482 62 - 115148730 -TTTTTATTTC-TTTGtttct-tttcttttc-----------tttcctttttttttgagac--------------------gggctggagtgcagt-------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416249 57 + 190429646 -tttttattca-tttatttat-tttctttcc----------------tttttttttGAGAT--------------------Gggctggagtgcaat-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935250 57 + 189454096 -tttttattca-tttatttat-tttctttcc----------------tttttttttGAGAT--------------------Gggctggagtgcaat-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927050 57 - 40319822 -tttttattca-tttatttat-tttctttcc----------------tttttttttGAGAT--------------------Gggctggagtgcaat-------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4480955 57 - 9219162 -tttttattca-tttatttat-tttctttcc----------------tttttttttGAGAT--------------------GAgctggagtgcaat-------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005868 57 + 135778131 -tttttattca-tttatttat-tttctttcc----------------tttttttttGAGAT--------------------Gggctggagtgcaat-------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775613 57 - 3013352 -TTTTTATTCA-TTCATTTAT-TTTCTTTCC----------------TTTTTTTTTGAGAT--------------------GAGCTGGAGAgcaat-------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004571 56 + 8656713 -Cttttattta-tttatttat-tttcttt-c----------------tttttttttGAGAT--------------------Gggctggagtgcaat-------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444513 88 - 190850796 TTTAAAATCTCttttatttcctttttttttt----------------ttttttcctgagacaggttctcaatctgtcactcaggctggaatgcagtggtacaat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519380 85 - 25294431 TTTAAAATCTC-tttatttac--ttatttat----------------ttatttcctgagataggttctcaatctgtcactcaggctggagtgcagtggtacaat i saiBol1.JH378129 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T e otoGar3.GL873702 952393 77 - 3201129 I e aotNan1.NW_018507635v1 14929981 96 + 15034901 I e cebCap1.NW_016107420v1 4074001 206 - 6311556 I a score=14462.000000 s hg38.chr9_KI270719v1_random 55261 2 + 176845 ca s panTro5.chr4 135080047 2 + 194502333 ca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60402 2 - 70559 ca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474544 2 - 115148730 ca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416306 2 + 190429646 ca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935307 2 + 189454096 ca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927107 2 - 40319822 ca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4481012 2 - 9219162 ca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005925 2 + 135778131 ca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775670 2 - 3013352 ca i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004627 2 + 8656713 ca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444601 2 - 190850796 cg i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519465 2 - 25294431 ca i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14930077 2 + 15034901 cg i aotNan1.NW_018507635v1 I 96 C 0 e micMur3.chr14 26331993 462 - 93316391 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T e otoGar3.GL873702 952393 77 - 3201129 I e cebCap1.NW_016107420v1 4074001 206 - 6311556 I a score=1702246.000000 s hg38.chr9_KI270719v1_random 55263 223 + 176845 cagctcactgcacctttgagctcctgggctaaagtaatcttcctttctcagcctcttgagtagttagaactaagacatgcaccaccatgtctggctaatttttaacat-tttttt-tgtggagatggagtctcgctatgttgcccaggctggtcttgaacttctggccacatgctatcctctcacctcgaccccccaaagcacttggattattggcTCAAGTACT s panTro5.chr4 135080049 222 + 194502333 cagctcactgcacctttgaactcctgggctaaagtaatcttcctttctcagcctcctgagtagttcgaactaagtcatgcaccaccgtgtctggatgatttttaacat-tttttt--gtggagatggagtctcactatgttgcccaggctggtcttgaacttctggccacatgctgtcctcccacctcggccccccaaagtacttggattattggcTCAAGTACT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60404 222 - 70559 cagctcactgcacctttgagctcctgggctaaagtaatcttcctttctcagcctcctgagtagttagaactaagacatgcaccaccatgtctggctaatttttaacat-tttttt--gtggagatggagtctcactatgttgcccaggctggtcttgaacttctggccacatgctatcctcccacctcgaccccccaaagtacttggattattggcTCAAGTACT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474546 205 - 115148730 cagctcactgcacctttgagc-------------------tcctttctcagcctcctgagtagttagaactaagttatgcaccaccgtgtctggctaatttttaacat-ttttttttgtggacatggagtctcactatgttgcccaggctggtcttgaacttctggccacgtgatatcctcccacctcgaccccccaaagtacttggattattggcTCAAGTACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416308 222 + 190429646 cagctcactgtacctttgaagtcctgagctaaagtaatcatcgtttctcagcctcctgagtagttagaactaaggcatgcaccatcttccctggctaatttttaacac-tttttt--gtggagatggagtctcgctatgttgctcaggctggtcttaaacttctgaccacatactatcctcccacctcaaccccctaaattacctggattattggcTCAAGTACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935309 222 + 189454096 cagctcactgtacctttgaagtcctgagctaaagtaatcatcgtttctcagcctcctgagtagttagaactaaggcatgcaccatcgtgcctggctaatttttaacac-tttttt--gtggagatggagtctcgctatgttgctcaggctggtcttaaacttctgaccacatactatcctcccacctcaaccccctaaattacctggattattggcTCAAGTACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927109 222 - 40319822 cagctcactgtacctttgaagtcctgagctaaagtaatcatcgtttctcagcctcctgagtagttagaactaaggcatgcaccatcgtgcctggctaatttttaacac-tttttt--gtggagatggagtctcgctatgttgctcaggctggtcttaaacttctgaccacatactatcctcccacctcaaccccctaaattacctggattattggcTCAAGTACT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4481014 222 - 9219162 cagctcactgtacctttgaagtcctgagctaaagtaatcatcgtttctcagcctcctgagtagttagaactaaggcatgcaccatcgtgcctggctaatttttaacac-tttttt--gtggagatggagtctcgctatgttgctcaggctggtcttaaacttctgaccacacactatcctcccacctcaaccccctaaattacttggattattggcTCAAGTACT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79005927 223 + 135778131 cagctaactgtacctttgaagtcctgagctaaagtaatcatggtttctcagcctcctgagtagttagaactaaggcatgcaccatcgtgcctggctaatttttaacacttttttt--gtggagatggagtctcgctatgttgctcaggttggtcttgaacttctgaccacccactatcctcccacctcaaccccctaaattacttggattattggcTCAAGTACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775672 222 - 3013352 cagctcactgtacctttgaagtcctgagctaaagtaatcatcgtttctcagcctcctgagtagttagaactaaggcatgcaccatcgtgcctggctaatttttaacac-tttttt--gtggagatggagtctcgctatgttgctcaggctggtcttaaacttctgaccacacactatcctcccacctcaaccccctaaattacttggattattggcTCAAGTACT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004629 222 + 8656713 cagctcactgtacctttgaggtccttagctaaagtaatcattgtttctcagcctcctgagtagttagaactaaggcatgcaccatcgtgcctggctaatttttaacac-tttttt--gtggagatggagtctcgctatgttgctcaggctggtcttgaacttctgaccacatgctatccttccacctcgaccccctaaattacttggattattggcTCAAGTACT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444603 215 - 190850796 cagctcactgtacccctgatctcctgggctaaagtaaccttcctttctcagcctcctgagtcattaggattaaggcatgcaccaccgtgcctggttaatttttaacac----ttt--gtggagatggagtctt----tgttgcccaggctagccttgaacttctgctcagaagatatcctcccaccttgacccttcaaagtacCTGAGTTATTGGCTCAAGTACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519467 215 - 25294431 cagctcactgtacccttgatctcctgggctaaagtaatcttcctttctcagcctcctgagtcattaggattaaggcatgcacccccttgcctggttaatttttaacac----ttt--atggcgatggagtctt----tgttgcccaggctggccttaaacttctgcttggaagatatcctcccaccttaacccctcaaagtacttgggttattggcTCAAGTACT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4074207 208 - 6311556 cagctcactgtacccttgatctcctgggctaaagtaatcttcctttctcggcctcct---taattaggattaaggcatgcaccaccgtgcctggttaatttttaacac----------tggagatggagtctt----tgttgcccaggttggccttgaacttctgctcggaagatatcctcccaccttgacctctcaaagtacttgggttattggcTCAAGTACT i cebCap1.NW_016107420v1 I 206 C 0 s aotNan1.NW_018507635v1 14930079 212 + 15034901 cagttcactgtacccttgatctcctgggctaaagtaatct---tttctcagcctcctgaatcgttaagattaaggcatgcaccacagtgcctggttaatttttaacaa----ttt--gtagagatggagtctt----tgttgcctaggctggccttgaacttctgctcagaagatatcctcccacattgacccctcaaagtacttgggttattggcTCAAGTACT i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T e otoGar3.GL873702 952393 77 - 3201129 I a score=163935.000000 s hg38.chr9_KI270719v1_random 55486 16 + 176845 TAGATGTATTAACCAG s panTro5.chr4 135080271 16 + 194502333 TAGATATATTAACCAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60626 16 - 70559 TAGATGTATTAACCAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474751 16 - 115148730 TAGATGTATTAACCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416530 16 + 190429646 TAGATGTATTAACCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935531 16 + 189454096 TAGATGTATTAACCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927331 16 - 40319822 TAGATGTATTAACCAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4481236 16 - 9219162 TAGATGTATTAACCAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79006150 16 + 135778131 TAGATGTATTAACCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775894 16 - 3013352 TAGATGTATTAACCAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004851 16 + 8656713 TAGATGTATTAACAAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444818 16 - 190850796 TAGATATATTAACCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519682 16 - 25294431 TAGATGTATTAACCAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4074415 16 - 6311556 TAGATGTATTAACCAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14930291 16 + 15034901 TAGATGTGTTAACCAG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 952470 16 - 3201129 TAGGTGTATCAATTAG i otoGar3.GL873702 I 77 C 0 e micMur3.chr14 26331993 462 - 93316391 I e dasNov3.JH569232 1774660 173 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=1584206.000000 s hg38.chr9_KI270719v1_random 55502 164 + 176845 GATCACAGAGAGCTTGATTTTGTAAGTTTGAGTTAGCATGTAATAACTGCAGTTGATTTTGATGCATGTATTTAATGAGAATCATTGCTTTAGACTA---------TATGATATTTGAAACAAAAGAGCAATAGGACTGCACGGCACAATATAAAGTCTGT----------TATGA--CATAGTG s panTro5.chr4 135080287 164 + 194502333 GATCTCAGAGAGCTTGATTTTGTAAGTTTGAGTTAGCATGTAATAACTGCAGTTGATTTTGATGCATGTATTTAATGAGAATCATTGCTTTAGACTA---------TATGATATTTGAAACAAAAGAGCAATAGGACTGCATGGCACAATATAAAGTCTGT----------TATGA--TATAGTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60642 164 - 70559 GATCACAGAGAGCTTGATTTTGTAAGTTTGAGTTAGCATGTAATAACTGCAGTTGATTTTGATGCATGTATTTAATGAGAATCATTGCTTTAGACTA---------TATGATATTTGAAACAAAAGAGCAATAGGACTGCATGGCACAATATAAAGTCTGT----------TATGA--CATAGTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474767 164 - 115148730 GATCTCAGAGAGCTTGATTTTGTAAGTTTGAGTTAGCATGTAATAACTGCAGTTGATTTTGATGCATGTATTTAATGAGAATCATTGCTTTAGACCA---------TATGATATTTGAAACAAAAGAGGAATAGGACTGCATGGCACAATATAAAGTCTGT----------TATGA--TATAGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416546 164 + 190429646 GATCTCAGAGAGCTTGATTTTGTAAGTTTGAATTAGCATGTAGTAACTGTAGTTGATTTCGATGCATGCATTTAATGAGAATCATTGCTTTAGACTA---------TATGATATTTGAAACAAAAGAGCAATAGGACTACATGGCACAATATAAAGTCtat----------tatga--tataatg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935547 164 + 189454096 GATCTCAGAGAGCTTGATTTTGTAAGTTTGAATTAGCATGTAGTAACTGTAGTTGATTTCGATGCATGCATTTAATGAGAATCATTGCTTTAGACTA---------TATGATATTTGAAACAAAAGAGCAATAGGACTACATGGCACAATATAAAGTCtat----------tatga--tataatg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927347 164 - 40319822 GATCTCAGAGAGCTTGATTTTGTAAGTTTGAATTAGCATGTAGTAACTGTAGTTGATTTCGATGCATGCATTTAATGAGAATCATTGCTTTAGACTA---------TATGATATTTGAAACAAAAGAGCAATAGGACTACATGGCACAATATAAAGTCtat----------tatga--tataatg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4481252 164 - 9219162 GATCTCAGAGAGCTTGATTTTGTAAGTTTGAATTAGCATGTAGTAACTGTAGTTGATTTTGATGCATGCATTTAATGAGAATCATTGCTTTAGACTA---------TATGATATTTGAAACAAAAGAGCAATAGGACTACATGGCACAATATAAAGTCtat----------tatga--tataatg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79006166 176 + 135778131 GATCTCAGAGAGCTTGATTTTGTAAGTTTGAATTAGCATCTAGTAACTGTAGTTGATTTTGATGCATGCATTTAATGAGAATCATTGCTTTAGACTA---------TATGATATTTGAAACAAAAGAGCAATAGGACTGCATGGCAcaatataaagtcaatataaagtctatataaattataatg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2775910 164 - 3013352 GATCTCAGAGAGCTTGATTTTGTAAGTTTGAATTAGCATGTAGTAACTGTAGTTGATTTTGATGCATGCATTTAATGAGAATCATTGCTTTAGACTA---------TATGATATTTGAAACAAAAGAGCAATAGGACTACATGGCACAATATAAAGTCtat----------tatga--tataatg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6004867 164 + 8656713 GATCTCAGAGAGCTTGATTTTGTAAGTTTCAATTAGCATGTAGTAACTGTAGTTGATTTTGATGCATGCATTTAATGAGAATCATTGCTTTAGACTA---------TATGGTATTTGAAACAAAAGAGCAATAGGACTGCATGGCACAATATAAAGTCTAT----------TATGA--TATAATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129444834 169 - 190850796 AATATCAGAGAGACTGATTTTCTAAGTTTGAATTAAGATAAAATAACGGTAGTTAATTTTGATGCATGTATTTAATGAGAATCATTGCTTTAGACTATACTT----TATGATATTTGAAACAAAACAGCAATAGGACTGTATGATACAAAATAAAATCTGT----------TATAA--TATATTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6519698 169 - 25294431 GATATTAGAGAGCCCAATTTTATAAGTTTGAATTAAGATATAATAACTGTAGTTGATTTTGATGCATGTCTTTAATGAGAATCATTGCTTTAGACTATACGT----TATGATATTTGAAACAAAACAGCAATAGGACTGCAGGGCACAAAATAAAATCTGT----------TATGA--TATATTG i saiBol1.JH378129 C 0 I 338 s cebCap1.NW_016107420v1 4074431 169 - 6311556 GATATCAGGGAGCCCGATTTTCTAAGTTTGAATTAAGATATAATAACTGTAGTTGATTTTGATGCATGTATTTAATGAGAATCGTTGCTTTAGACTATACTG----TATGATATTTGAAACAAAACAGCCATAGGACTGCATGGCACAAAATAAAATCTGT----------TATGA--TATATTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14930307 169 + 15034901 GATACCAGAGAGCCTGATTTTATAAGTTTGAATTAAGATATAATAACTGTAGTTGATTTTGATGCATGTATTTAATGAGAATCATTGCTTTAGACTATACTT----TATGATATTTGAAACAAAACAGCAATAGGACTGCATGGCACAAAATAAAATCCGT----------TATGA--TATATTG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 952486 160 - 3201129 GACTTCATAGAGCCCGATTCTATAAATTTGGATTAAGATTTAATACC----ACTGATTTTGATGAAAGTGATCAACGAGAATCATGGCTTCAGACTATACCTTAAATATGGTACTTAA--------AGCAATAAGACTTCATGGC-TGAAATAAAGACTGC----------TATAC--TATATCT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1774833 172 + 5974691 GACCTCAAACAGCCTGATTTTATGTGTTTGGATTAAGATCTAATAATGGCATTTGGTTT-GATGCCAATGGTCAATGAGACTCATTGCTGTAGACCATGCATTAAATATGGTATTTCAAACAAAAAAACAAAAAGACTTCATGACACAAAATAAAAACTGC----------TATAA--TGTATTG i dasNov3.JH569232 I 173 C 0 e micMur3.chr14 26331993 462 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=532035.000000 s hg38.chr9_KI270719v1_random 55666 61 + 176845 ACTTTAATATATTCTAATTAAAATTATAATAGT-AAAAGCTAAAAATGACAAGACAATTGTT s panTro5.chr4 135080451 61 + 194502333 ACTTTAATATATTCTAATTAAAATTATAATATT-AAAAGCTAAAAATGACAAGACAATTGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60806 61 - 70559 ACTTTAATATATTTTAATTAAAATTATAATAGT-AAAAGCTAAAAATGACAAGACAATTGTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90474931 61 - 115148730 ACTTTAATATATTCTAATTAAAATTGTAATATT-AAAAGCTAAAAATGACAAGACAATTGTT i nomLeu3.chr7b C 0 I 315 s rheMac8.chr5 131416710 61 + 190429646 actttaatatattataattaaaattattatatt-aAAAGCTAAAAATGATAAGACAATTGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935711 61 + 189454096 actttaatatattataattaaaattattatatt-aAAAGCTAAAAATGATAAGACAATTGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927511 61 - 40319822 actttaatatattataattaaaattattatatt-aAAAGCTAAAAATGATAAGACAATTGTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4481416 61 - 9219162 actttaatgtattataattaaaattattatatt-aAAAGCTAAAAATGACAAGACAATTGTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79006342 61 + 135778131 actttaatatattataattaaaattagaatatt-aaaagctaaaaATGACAAGACAATTGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2776074 61 - 3013352 actttaatgtattataattaaaattattatatt-aAAAGCTAAAAATGACAAGACAATTGTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6005031 61 + 8656713 ACTTTAATATattataattaaaattataatatt-aaaagctaaaaATGACAAGACAATTGTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129445003 56 - 190850796 ACTTTAATATATTCTAACTAAAATTAAAATCTT-GAAACCTAAAAAT-----GACAATTGTT i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6520205 56 - 25294431 ACTTTAATATATTCTAACTAAAATTAAAATCTT-AAAACCTAAAAAT-----GACAATTGCT i saiBol1.JH378129 I 338 I 1 s cebCap1.NW_016107420v1 4074600 56 - 6311556 ACTTTAATATATTCTAACTAAAATTAAAATGTT-AAAACCTAAAAAT-----GACAATTGTT i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14930476 56 + 15034901 ACTTTAATATATTCTAACTAAAATTAAAATCTT-AAAACCTAAATAT-----GACAATTGTT i aotNan1.NW_018507635v1 C 0 I 1 s otoGar3.GL873702 952646 62 - 3201129 ATTTAAGTATATTTTAATTATAATTAGAATCTTAAAAAACTGAGAATTACAATGCAATTTTA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1775005 61 + 5974691 ATTTTAATCTTTTAAAATTATAATTAGAAACCT-CAAGCCTAAAAATTACAAGGTAATTTTA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=1332520.000000 s hg38.chr9_KI270719v1_random 55727 148 + 176845 AGAAA-TCATATCACGACAGCATA-------------------------------------ATCATGTATCCAGAAGTGATTGAT-ACAATAA-CATGAACTGACATTTTGCTACAATATTAATCAGTTAATACAGGTTTTGAGGTTTCAGTTAACTGGTTAATCATAAAATATTATA------------TAAAATATTA s panTro5.chr4 135080512 148 + 194502333 AGAAA-TCATATCACGACAGCATA-------------------------------------ATCATGTATCCACAAGTGATTGAT-ACAATAA-CATGAACTGACATTTTGCTACAATATTAATCAGTTAATACATGTTTTTAGGTTTCAGTTAACTGGTTAATCATAAAATATTATA------------TAAAATATTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 60867 148 - 70559 AGAAA-TCATATCACGACAGCATA-------------------------------------ATCATGTATCCACAAGTGATTGAT-ACAATAA-CATGAACTGACATTTTGCTACAATATTAATCAGTTAATACAGGTTTTTAGGTTTCAGTTAACTGGTTAATCATAAAATATTATA------------TAAAATATTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90475307 160 - 115148730 agaaa-TCATATCACGACAGCATA-------------------------------------ATCATGTATCCACAAGTGATTGAT-ACAATAA-CATGAACTGACATTTTGCTACAATATTAATCAGTTAATACAGGTTTTTAGGTTTCAGTTAACTGGTTAATCATaaaatattatacaaaatattatccaaaatatta i nomLeu3.chr7b I 315 C 0 s rheMac8.chr5 131416771 185 + 190429646 AGAAA-TCATATCAGGACAGCATAATGTACCATGAACATTATTTATGTGGACACATAATGTATCATGTATCCACAAGTGATTGAT-ACAATAG-CATGAACTGCCATTTTGCTACAATATTAATCAGTTAATACAGGTTTTTAGGTTTCAGTTAACTGGTTAATCATAAAATATTATA------------TAAAATATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935772 185 + 189454096 AGAAA-TCATATCAGGACAGCATAATGTACCATGAACATTATTTATGTGGACACATAATGTATCATGTATCCACAAGTGATTGAT-ACAATAG-CATGAACTGCCATTTTGCTACAATATTAATCAGTTAATACAGGTTTTTAGGTTTCAGTTAACTGGTTAATCATAAAATATTATA------------TAAAATATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927572 185 - 40319822 AGAAA-TCATATCAGGACAGCATAATGTACCATGAACATTATTTATGTGGACACATAATGTATCATGTATCCACAAGTGATTGAT-ACAATAG-CATGAACTGCCATTTTGCTACAATATTAATCAGTTAATACAGGTTTTTAGGTTTCAGTTAACTGGTTAATCATAAAATATTATA------------TAAAATATTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4481477 185 - 9219162 AGAAA-TCATATCAGGACAGCATTATGTACCATGAACATTATTTATGTGGACACATAATGTATCATGTATCCACAAGTGATTGAT-ACAATAG-CATGAACTGCCATTTTGCTACAATGTTAATCAGTTAATACAGGTTTTTAGGTTTCAGTTAACTGGTTAATCATAAAATATTATA------------TAAAATATTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79006403 184 + 135778131 AGAAA-TCATATCAGGACAGCATAATGTACCATGAACATTATTTATGTGGATACATAATGTATCATGTATCC-CAAGTGATTGAT-ACAATAG-CGTGAACTGCTATTTTGCTACAATATTAATCAGTTAATACAGGTTTTTAGGTTTCAGTTAACTGGTTAAACATAAAATATTATA------------TAAAATATTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2776135 185 - 3013352 AGAAA-TCATATCAGGACAGCATAATGTACCATGAACATTATTTATGTGGACACATAATGTATCATGTATCCACAAGTGATTGAT-ACAATAG-CATGAACTGCCATTTTGCTACAATATTAATCAGTTAATACAGGTTTTTAGGTTTCAGTTAACTGGTTAATCATAAAATATTATA------------TAAAATATTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6005092 185 + 8656713 AGAAA-TCATATCAGGACAGTATAATGTACCATGAACATTATTTATGTGGATACATAATGTATCATGTATCCGCAAGTGATTGAT-ACAATAG-CATGAACTGCCGTTTTGCTACAATATTAATCAGTTAATACAGGTTTTTAGGTTTCAGTTAACTGGTTAATCATAAAATATTATA------------TAAAATATTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129445060 134 - 190850796 GAAAA-TCAAATCATGACAGCATA-------------------------------------ACCATGTATCTG--------------CAATAG-CGTTAACTGCCACTTTGCTACAATATTAATCAGTTAATGCAGGTTTCTAGGCATCAGTTAACTGG-TAATCCTAAAATGttata------------taaaatatta i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6520262 147 - 25294431 GAAAA-TCATATCATGACAGCATA-------------------------------------ATCATGTATCTGCAAGTGATTGAT-ACAAGAA-CATGAACTGCCACTTTGCTACAATATTAATCAGTTAATGCAGGTTTTTAGGTAACAGTTAGCTAG-CAATCATAAAATGTTATT------------TAAAGTATTA i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4074657 148 - 6311556 GAAAAGTCATATGATGACCGCATA-------------------------------------ATCATGTATCTGCAAGTGATTGAT-ACAATAA-CATGAACTGCCACTTTGCTACAATAttaatcagttaatgcaggtttttaggtaacagttaactgg-taatcaTAAAATGTTATA------------TAAAATATTA i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14930533 147 + 15034901 GAAAA-TCATATCATGACAGCATA-------------------------------------ATCATGTATCTGCAAGTGATTGAC-ACAATAA-CATGAACTGCCATTTTGCTACAATATTAATCAGTTAATGCAGGTTTTTAGGTATCAGTTAACTGG-TAATCATAAAATGTTGTA------------TAAAAGATTA i aotNan1.NW_018507635v1 I 1 C 0 s otoGar3.GL873702 952708 146 - 3201129 AGAAA-TCATATCACAGCCGCATA-------------------------------------ATCACGTATCTACAAGTGACCGATGGTAATAGACATGAACTTCTACTTTGTTAAACTATTGGTTAGTTTTTGTAGGTTTTTATGTGTCAATTAAATAGTTAACTAAAAAAT----TG------------TTAGCTAGTG i otoGar3.GL873702 C 0 I 1 s dasNov3.JH569232 1775066 137 + 5974691 AGCAA-TTATTTCATAACAAAGTG-------------------------------------ATCATATAATTACACATAATTGAT-ATAAAAA-CATAAATTGCCATTCTGTTTAATCATTATGTAGCTAATGTGGTTTTTTGGTCATCAATTAAATGGTTAATTATAAAATATGGG----------------------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26331993 462 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=886144.000000 s hg38.chr9_KI270719v1_random 55875 93 + 176845 TCAAATTGTTGTGTAAGTCATCTCACTG-TATTCTAAAATTTATGTTATTTTATATTTCTAATCTGTGT-TTTGCAGAGATCATGAAAATTTTAA s panTro5.chr4 135080660 93 + 194502333 TCAAATTGTTGTGTAAGTCATCTCACTG-TATTCTAAAATTTATGTTATTTTATATTTCTAATCTGTGT-TTTGCAGAGATCATGAAAATTTTAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 61015 93 - 70559 TCAAATTGTTGTGTAAGTCATCTCACTG-TATTCTAAAATTTATGTTATTTTATATTTCTAATCTGTGT-TTTGCAGAGATCATGAAAATTTTAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90475467 93 - 115148730 tcAAATTGTTGTGTAAGTCATCTCACTG-TATTCTAAAATTTATGTTATTTTATATTTCTAATCTGTGT-TTTGCAGAGATCATGAAAATTTTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131416956 93 + 190429646 TCAAATTGTTGCATAAGTCATCTCCCTG-TATTCTAAAATTTATGTTATTTTATGTTTCTAATCTCTGT-TTTGCAGAAATCATGAAAATTTTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130935957 93 + 189454096 TCAAATTGTTGCATAAGTCATCTCCCTG-TATTCTAAAATTTATGTTATTTTATGTTTCTAATCTCTGT-TTTGCAGAAATCATGAAAATTTTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927757 93 - 40319822 TCAAATTGTTGCATAAGTCATCTCCCTG-TATTCTAAAATTTATGTTATTTTATGTTTCTAATCTCTGT-TTTGCAGAAATCATGAAAATTTTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4481662 93 - 9219162 TCAAATTGTTGTGTAAGTCATCTCCCTA-TATTCTAAAATTTATGTTATTTTATGTTTCTAATCTCTGT-TTTGCAGAAATCATGAAAATTTTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79006587 94 + 135778131 TCAAATTGCTGTGTAAGGCATCTCCCTGTTATTCTAAAACTGATGTTATTTTATGTTTCTAATCTCTGT-TTTGCAGAGATCATGAAAATTTTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2776320 93 - 3013352 TCAAATTGTTGTGTAAGTCATCTCCCTA-TATTCTAAAATTTATGTTATTTTATGTTTCTAATCTCTAT-TTTGCAGAAATCATGAAAATTTTAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6005277 91 + 8656713 TCAAATTGTTGTGTAAGGCATCTTCCTG-TATTCTAAAATT--TGTTATTTTATATTTCTAATCTGTGT-TTTGCAGGGATCATGAAAATTTTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129445194 90 - 190850796 tcaaattatt---taaGTAATCTCACTG-TATTCTAACATTTATGTAATTTTATATTTCTAACCTGTGT-TTTGCAGAGATCGTGAAAATTTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6520409 90 - 25294431 TCAAATTATT---TACATAATCTCACTG-TATTCTAACATTTATGTAATTTTATATTTCTAATCTGTGT-TTTGCAGAGATCATGAAAATTTTAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4074805 90 - 6311556 TCAAATTATT---TACATAATCTCACTG-TATTCTAATATTTATGTAATTTTATATTTCTAATCTGTGT-TTTGCAGAGATCATGAAAATTTTAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14930680 90 + 15034901 TCAAATTATT---TATGTAATCTCACTG-TATTCTAGCATTTATGTAATTTTATATTTCTAATCTGTGT-TTTGCAGAGATCATGAAAATTTTAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26332455 94 - 93316391 TCAAATTGTTGTGTAAATCATCTCACCG-TATTCCAAAATTTGTTATAACCTGTATTTCTAATCTGTATGTTTGCATAGATCATGTAAATTTTAA i micMur3.chr14 I 462 I 63 s otoGar3.GL873702 952855 94 - 3201129 TAAAGTTGTTGTGTAAGTCATCTCACTG-CAGTCCCAACTTTATTATACCACATATCTCTAATCTGTACTTTTGCACAGATCATGTAAAGTTTAA i otoGar3.GL873702 I 1 C 0 s dasNov3.JH569232 1775203 40 + 5974691 CAAAATTGTT-----------------G-TGTC-------------------------------------TTTTCAGAGATCATGAAAATCTTAT i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=645563.000000 s hg38.chr9_KI270719v1_random 55968 68 + 176845 CTGGGTAACTGAAGAAGAATTGTCCCAAGGACTTGAATAAATGTTAATGTTCATAACAG-TATGTTCTA s panTro5.chr4 135080753 65 + 194502333 CTGGGTAACTGAAGAA---TTGTCCCAAGGACTTGAATAAATGTTAATGTTCATAACAG-TATGTTCTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 61108 68 - 70559 CTGGGTAACTGAAGAAGAATTGTCCCAAGGACTTGAATAAATGTTAATGTTCATAACAG-TATGTTCTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90475560 68 - 115148730 CTGGGTAACTGAAGAAGAATTGTCCCAAGGACTTGAATAAATGTTAATGTTCATAACAG-TATGTTCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131417049 68 + 190429646 CTGGGTAACTGAAGAAGAATTGTCTCAAGGACTTGAATAAATGTTAATGTTCATAACAG-TATGTTCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130936050 68 + 189454096 CTGGGTAACTGAAGAAGAATTGTCTCAAGGACTTGAATAAATGTTAATGTTCATAACAG-TATGTTCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927850 68 - 40319822 CTGGGTAACTGAAGAAGAATTGTCTCAAGGACTTGAATAAATGTTAATGTTCATAACAG-TATGTTCTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4481755 68 - 9219162 CTGGGTAACTGAAGAAGAATTGTCTCAAGGACTTGAATAAATGTTAATGTTCATAACAA-TGTGTTCTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79006681 68 + 135778131 CTGGGTAACTGAAGAAGAATTGTCTCAAGGACTTGAATAAATGTTAATGTTCAAAACAG-TATGTTCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2776413 68 - 3013352 CTGGGTAACTGAAGAAGAATTGTCTCAAGGACTTGAATAAATGTTAATGTTCATAACAG-TATGTTCTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6005368 68 + 8656713 CTGGGTAACTGAAGAAGAATTGTCTCAAATACTTGAATAAATGTTAATGTTCATAACAG-TATGTTCTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129445284 68 - 190850796 CAATGTAATGGAAGAAGAATTGTCCCAAGGACTTGAATAAATGTTAATGTTCATAACAG-GACATTTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6520499 68 - 25294431 CTGGATAATGGAAGAAGAATTGTCCCAAGAACTTGAATAAATGTTAATGTTCCTAACAG-TGCATTTTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4074895 68 - 6311556 CTGGGTAATGGAAGAAGAATTGTCCCAAGGACTTGAATAAATGTTAATGTTCATAACAG-TACATTTTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14930770 65 + 15034901 CTGGGTAATG---GAAGACTTGTTCCAAGGACTTGAATAAATGTTAATATTCATAACAG-TACATTTTA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 952949 66 - 3201129 AAAGATAAGT---GAAGACCTGACCCAAGGATTGGGATAAACTTTAATGCTCATCACAGTTATGCTCCA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1775243 68 + 5974691 TGAGGTAATTGATAAAAAATGGACACAAAGACTTAGATAAAATTTACTGTTTGTCACAG-TATGTTCCC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26332549 63 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=3352220.000000 s hg38.chr9_KI270719v1_random 56036 356 + 176845 AAAAG-AAATTTAAGTAAAAAAGG---AAAAAAC---ATATTTCATTTT-AAAAATAT--CTACCCATGCACATCATTCATCTAAAAAACCCATTTACTATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAATAGAAATATTCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAACATCAAAAATATGCTTATTTCTAGTAACCAGAGAACACAGCAGGGTTATGAAACTTTGGATTCCTG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATACGAGGTTTTGAGTTTC-------------AAAACACAATAGCATATTT----AAAAAATACTTGGTGGGGGTCTGGCAATTGAGAG s panTro5.chr4 135080818 356 + 194502333 AAAAG-AAATTTAAGTAAAAAAGG---AAAAAAC---ATATTTCGTTTT-AAAAATAT--CTACCCATGCACATCATTCATCTAAAAAACCCATTTAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAATAGAAATATTCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAACATCAAAAATTTGCTTATTTCTAGTAACCAGAGGACACAGCAGGGTTATGAAACCTTGGATTCCTG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATACGAGGTTTTGAGTTTC-------------AAAACACAACAGCTTATTT----AAAAAATACTTGGTGGGGGTCTGGCAATTGAGAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 61176 355 - 70559 AAAAG-AAATTTAAGTAAAAAAGG---AAAAAAC---ATATTTCGTTTT-AAAAATAT--CTACCCATGCACATCATTCATCTAAAAAACCCATTTAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAATAGAAATATTCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAACATCAAAAATATGCTTATTTCTAGTAACCAGAGAACACAGCA-GGTTATGAAACTTTGGATTCCTG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATACGAGGTTTTGAGTTTC-------------AAAACACAATAGCATATTT----AAAAAATACTTGGTGGGGGTCTGGCAATTGAGAG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90475628 356 - 115148730 AAAAG-AAATTTAAGTAAAAAAGG---AAAAAAC---ATATTTCGTTTT-AAAAATAT--CTACCCATGCATATCATTCATCTAAAAAACCCATTTCATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAATAGAAATCATCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAACATCAAAAATATGCTTATTTCTAGTAACCAGAGAACACAGCAGGGTTATAAAACCTTGGATTCCCG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATACGAGATTTTGAGTTTC-------------AAAACACAATAGCATATTT----AAAAAATACTTGGTGGGGGTCTGGCAATTGGGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131417117 359 + 190429646 AAAAG-AAATTTAAGTAAAAACAG-AAAAAAAAC---ATATTTCA-TTT-AAAAATAT--CTACCCATGCACATCATTCATCTCAAAAATCCATTTAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAACAGAAATATTCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAAGATCAAAAGTATGCTTATTTCTAGTAACCAGAGAACACAGCAGAGTTGTGAAACCTTGGATTCCTG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATATGAAGTTTTGAGTTTC-------------AAAACACAATAGCATATTT--AAAAAAACTACTTTCTGAGGGTCTGGCAATTGAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130936118 360 + 189454096 AAAAG-AAATTTAAGTAAAAACAG-AAAAAAAAC---ATATTTCGTTTT-AAAAATAT--CTACCCATGCACATCATTCATCTCAAAAATCCATTTAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAACAGAAATATTCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAAGATCAAAAGTATGCTTATTTCTAGTAACCAGAGAACACAGCAGAGTTGTGAAACCTTGGATTCCTG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATATGAAGTTTTGAGTTTC-------------AAAACACAATAGCATATTT--TAAAAAACTACTTTCTGAGGGTCTGGCAATTGAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34927918 361 - 40319822 AAAAG-AAATTTAAGTAAAATCAGAAAAAAAAAC---ATATTTCGTTTT-AAAAATAT--CTACCCATGCACATCATTCATCTCAAAAATCCATTTAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAACAGAAATATTCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAAGATCAAAAGTATGCTTATTTCTAGTAACCAGAGAACACAGCAGAGTTGTGAAACCTTGGATTCCTG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATATGAAGTTTTGAGTTTC-------------AAAACACAATAGCATATTT--TAAAAAACTACTTTCTGAGGGTCTGGCAATTGAGAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4481823 362 - 9219162 AAAAG-AAATTTAAGTAAAAACAGAAAAAAAACC---ATATTTCGTTTT-AAAAATAT--CTACCCATGCACATCGTTCATCTCAAAAATCCATTTAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAACAGAAATATTCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAAGATCAAAAGCTTGCTTATTTCTAGTAACCAGAGAACACAGCAGAGTTGTGAAACCTTGGATTCCTG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATATGAAGTTTTGAGTTTC-------------AAAACACAATAGCATATTT-AAAAAAAACTACTTTCTGAGGGTCTGGCAATTGAGAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79006749 358 + 135778131 AAAAG-AAATTTAAGTCAAAACAGGAAAAAAA-------ATTCA-TTTT-AAAAATAT--CTACCCATGCACATCATTCATCTCAAAAATCCATTTAATATAATCATCTAGTTATGTAAAGATAAACCCAATAGCC-AC--TTAAAACAGAAATATTCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAAGATCAAAAATATGCTTATTTCTAGTAACCAGAGAACACAGCAGAGTTGTGAAACCTTGGATTCCTG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATATGAAGTTTTGAGTTTC-------------AAAACACAATAGCATATTTAAAAAAAAAATACTTTCTGAGGGTCTGGCAATTGAGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2776481 361 - 3013352 AAAAG-AAATTTAAGTAAAAACAGAAAAAAAACC---ATATTTAGTTTT-AAAAATAT--CTACCCATGCACATCGTTCATCTCAAAAATCCATTTAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAACAGAAATATTCTATTTCATTATTAGAAAT---TATTATTTTAAAAGG-TTGTTAAAAGATCAAAAGTATGCTTATTTCTAGTAACCAGAGAACACAGCAGAGTTGTGAAACCCTGGATTCCTG-TTTGGTTTGGCAGGTAACTAGATTAACAAAAATATGAAGCTTTGAGTTTC-------------AAAACACAATAGCATATTT--AAAAAAACTACTTTCTGAGGGTCTGGCAATTGAGAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6005436 360 + 8656713 CAAAGAAAATTTAAGTAAAAACAG--AAAAAAAC---ATATTTCGTTTT-TAAAAAAT--CTACCCATGCACATCATTCATCTTAAAAATCCGTTTAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--TTAAAACAGAAATATTCGATTTCATTATTAGAAAT---TATTATTTTAAAACG-TTGTTAAAAGATCAAAAGTATGCTTATTTCTAGTAACCAGAGAACACAGCAGAGTTGTGAAACCTTGGATTCCTG-TTTGGTTTGGCGGGTAACTAGATTAACAAAAATGTGAGGTTTTGAGTTTC-------------AAAACACAATAGCATATTT--AAAAAAAATACTTTCTGAGAGTCTGTCAATTGAGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129445352 351 - 190850796 AAAAG-AAATTTAAGTAAAAAAGA----AAAAAC---ATATTTCATTTT-AAAAATAT--CTACCTAAGCACATCATTTGTCTC-AAATCCCATTCAATATAATCATCTAGTTATGTAAAGACATACCCAATAGCT-AC--Ctaaaatataaatattctatttcattattagaa------attattttaaaaGA-TTGTTAAAACATTAAAAATGTGC-TATTTCTATTAACCTAAGAATGCAACAGAA-TATGAAGCCGTGAATTCCTGTTTTGGTTTGGCAGGTAAATAGATTAACAAAAATATGTGGTTTTGAGTTTC-------------AAAAAACTATAGCATATTT---AAAAAAATACTTGGTAGGGGTCTGGCAGGTGAGAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6520567 348 - 25294431 AAAAG-ATATTTAAGTAAAAAAGG----AAAAAC---ACATTTCATTTT--AAAATAT--CTACCCAAGCACATCATTTGTCTC-AAATCTCATTCAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--CTAAAATAGAAATATTCTATTTCATTATTAGAA------ATTATTTTAAAAGA-TTGTTAAAACATTAAAAATGTGC-TATTTCTATTAACTTAAGAATACAACAGAA-TACGAAGCTGTGAATTCCTGTTTTGGTTTGGCAGGTAAATAGATTAACAAAAATACATGGTTTTGAGTTTC-------------AAAAAACAATAGCATATTT-----AAAAATACTTGGTGGGGGTCTGGCATGGGAGAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4074963 350 - 6311556 ATAAG-AAATTTAAGTAAAAAAGG----AAAAAC---ATATTTCATTTT-AAAAATAT--CTACCCAAGCACATCATTTGTTTC-AAATCCCATTCAATATAATCATCTAGTTATGTAAAGATATACCCAATAGCT-AC--CTAAAGTGGAGCTCTTCTATTTCATTATTAGAA------ATTACTTTAAAAGG-TTGTTAAAACATTAAAAATGTGC-TATTTCTATTAACCTGAGAATACAACAGAA-TATGAAGCCGTGAATTCCTGTTTTGGTTTGGCAGGTAAATAGATTAACAGAAATACATGGTTTTGAGTTTC-------------AGAAAACTATAGCGTATTT----TAAAAATACTTGGTGGGGGTCTGGCAGGTGAGAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14930835 350 + 15034901 AAAAG-AAATTTAAGTAAAAAAGG----AAAAAC---ATATTTCATTTT-AAAAATAT--CTACCCAAGCACATCATTTGTCTC-AAATCCCATTCAATATAATCATCTAGTTATGTAAATATATACCCAATAGCT-AC--CTAAAATAGAAGTATTCTATTTCATTATTAGAA------ATTATTTTAAAGGG-TTGTTAAAACATTAAAAATGTGC-TATTTCTATTAACCTAAGAATGCAACAGAA-TATGAAGCCGTGAATTCCTGTTTTGGTTTGGCAGGTAAATAGATTAACAAAAATACGTGGTTTTGAGTTTC-------------AAAAAACTATAGCATATTT----AAAAAATACTTGGTGGGGGTCTGGCACATGAGAG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26332612 358 - 93316391 AAAAT-AAATTTAAGTAAACAAGA----AAAAAAAAGACCTTTCATTTTCAAAAATAT--CTCCCCATGTACATCATTCTGCTCAAAAACACATCCAATATAATCA-----TCTAGTAAAGATATACCAAATATCC-ACTATTAAAATAGAAATATTCTATTTTGTTATTAGTGATAGAAATTATCATGAAAAG---GTTAAGATATTAAAAATGTGCTTATTTCTGGTTATCATAGAACACAGCAGGGTTTTGAAGCCTTGGATTCTCATTTTGGGTTGGAGGGTAATGGGATTAACAAAAATATGCCATTGTTAGCTTC-------------AAAAAACAATGGCATATTA----AAAAATTATTGGATGGAGGTCTGGCAATTGAGAG i micMur3.chr14 I 63 I 232 s otoGar3.GL873702 953015 360 - 3201129 -AAAT-AAATTTAAGTAAACAAGA----AAAAAC---ATCTTTCATCTTCAAAAATAT--CTCTCTATGCATATAATTCTGCTCAAAAATACATCCAACGTAATCAACTAGTCAAGTAAAGATATATCCAGTAGCCAATTATTAAAATAGAAATATTCTACTTTGTTATTAGTAATAGAAATTATCATGAAAAGATTATTAAGGCATT-CAAATATGCTTATTCCTGGTTATCAGAAAACACAGTAGGGTTATGAAGCCTTGGATTTTGCTTTTGGGTTGGAAGATAATCAGATG---AAAAATATTCCATTGTTATCTTC------------AAAAAAACAATGGCATATTC----AAAAATTACTAGACGAAGTTCTGGCAATTAAGAG i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1775311 345 + 5974691 -AAAG-AGATCTGTGttaaaaaaa----aaaaaa---ttatt----ttc-aaaaatattCCCCTCTATTCAAATCATTTTGTTCAAAACCCTATTCAATATAATTATACAGTTAGATAAAGAT------------T-AA----------GAAATAATCTATTTCATTAGTAATAGT---AATTTTAATAAGATG-TTATTAAAATTCCAAAATTAATC-TATCTTTGACTATCAGAGAACAGATCAGGGCTCTGAAGACTTGGCTTTCTGTTTTGGTTTTCAAGACAATTGGAGTTACAAAAATACATATTTGCTAGTTTTTTTGTTTTGTTATTTGCTTTAATGGCATATTT---TAAAAAATAGTGGATAAAA-TCTGGCAATTTAGAG i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=2287694.000000 s hg38.chr9_KI270719v1_random 56392 272 + 176845 ACCTTAGTAGCATAATCATTGGTCTTCACAATCACTGCCAGGTACTCTTTCAAACTAGCTTGAATAACTGCAAAACACATCATCAACCCAGC--TTTTTTT----------------TGCTGGAC-CTGGGCATATATAAACTGATTAGAT---------TTAAAAATAAAAAAATTAGAGTTTTTTCTGTTGTGT-TT---GAAGAGGTGAACCCTTGGACTCAAAATCTCTCAAAAGTCCTGTCTTTCACTTCAGAATCTGGGCTAATTTGCACAGGAAT-ATACTTCTGTGTTTTAATAAAC s panTro5.chr4 135081174 271 + 194502333 ACCTTAGTAGCATAATCATTGGTCTTCACAATCACTGCCAGGTACTCTTTCAAACTAGCTGGAATAACTGCAAAACACATCATCAACCCAGC--TTTTTTT-----------------GCTGGAC-CTGGGCATATATAAACTGATTAGAT---------TTAAAAATAAAAAAATTAGAATTTTTTCAGTTGTGT-TT---GAAGAGGTGAACCCTTGGACTCAAAATCTCTCAAAAGTCCTGTCTTTCACTTCAGAATCTGGGTTAATTTGCACAGGAAT-ATACTTCTGTGTTTTAATAAAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 61531 271 - 70559 ACCTTAGTAGCATAATCATTGGTCTTCACAATCACTGCCAGGTACTCTTTCAAACTAGCTTGAATAACTGCAAAACACATCATCAACCCAGC--TTTTTTT-----------------GCTGGAC-CTGGGCATATATAAACTGATTAGAT---------TTAAAAATAAAAAAATTAGAGTTTTTTCTGTTGTGT-TT---GAAGAGGTGAACCCTTGGACTCAAAATCTCTCAAAAGTCCTGTCTTTCACTTCAGAATCTGGGTTAATTTGCACAGGAAT-ATACTTCTGTGTTTTAATAAAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90475984 289 - 115148730 ACCTTAGTAGCATAATCATTGGTTTTCACAGTCACTGCCAGGTACTCTTTCAAACTAGCTTGAATAACTGTAAAACACATCATCAACCTGGC--ttttttttttttttttttttttttGCTGGAC-TTGGGCATATATAAACTGATTAGAT---------TTAAAAATAAAAAAATTAGAGTTTTTTCAGTTATGTATA---GAAGAGGTGACCCCGTGGACTCAAAATGTCTCAAAAGTCCTGTGTTTCACTTCAGAATCTGGGTTAATTTGCACAGGAAC-ATACTTCTGTGTTTTAATAAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131417476 274 + 190429646 ACCTTAGTAGCATAATCATTGGTCTTCACAATCACTGCCAGTTACTCTTTCAGACTAGCACGAATAACTGCAAAACACATCATCAATCCAGCTTTTTTTTT-----------------GCTGGAC-CTGGGCATATATAAACTGATTAGAT---------TTAAAAATGAAATAATGAGAGTTTTTTCAGTTGTGTACA---GAAGAGGTGATCCCTGAGACTCAAAATCTCTCAAAAGTCCCGTCTTTCACTTCAGAATCTGAGTTAATTTGCACAGGAAT-ATACTTCTGTGTTTTAATAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130936478 274 + 189454096 ACCTTAGTAGCATAATCATTGGTCTTCACAATCACTGCCAGGTACTCTTTCAGACGAGCACGAATAACTGCAAAACACATCATCAATCCAGCTTTTTTTTT-----------------GCTGGAC-CTGGGCGTATATAAACTGATTAGAT---------TTAAAAATGAAATAATGAGAGTTTTTTCAGTTGTGTACA---GAAGAGGTGACCCCTGAGACTCAAAATCTCTCAAAAGTCCCGTCTTTCACTTCAGAATCTGAGTTAATTTGCACAGGAAT-ATACTTCTGTGTTTTAATAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34928279 274 - 40319822 ACCTTAGTAGCATAATCATTGGTCTTCACAATCACTGCCAGGTACTCTTTCAGACTAGCACGAATAACTGCAAAACACATCATCAATCCAGCTTTTTTTTT-----------------GCTGGAC-CTGGGCGTATATAAACTGATTAGAT---------TTAAAAATGAAATAATGAGAGTTTTTTCAGTTGTGTACA---GAAGAGGTGACCCCTGAGACTCAAAATCTCTCAAAAGTCCCGTCTTTCACTTCAGAATCTGAGTTAATTTGCATAGGAAT-ATACTTCTGTGTTTTAATAAAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4482185 274 - 9219162 ACCTTAGTAGCATAATCATTGGTCTTCACAGTCACTGCCAGGTACTCTTTTAGACTAGCACGAGTAACTGCAAAACACATCATCAATCCAGCTTTTTTTTT-----------------GCTGGAC-CTGGACATATATAAACTGATTAGAT---------TTAAAAATGAAATAATGAGAGTTTTTTCAGTTGTGTATA---GAAGAGGTGACCCCTGAGACTCAAAATCTCTCAAAAGTCCCGTCTTTCACTTCAGAATCTGAGTTAATTTGCACAGGAAT-ATACTTCTGTGTTTTAATAAAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79007107 272 + 135778131 ACCTTAGTAGCATCATCATTGGTCTTCACAATCACTGCAGGGTACTCTTTCAGACTAGCACGAATAACTGCAAAACACATCATCAACCCAGC--TTTTTTT-----------------GCTGGAC-CTGGGCATATATAAGCTGATAAGAT---------TTTAAAATGAAATAATGAGAGTTTTTTCAGTTGTGTATA---GAAGAGGTGACCCCTGGGACTCAAAATCTCTCAAAAGTCCCGTCTTTCACTTCAGAATCTGGGTTAATTTGCATGGGAAT-ATACTTCTGTGTTTTAATAAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2776842 274 - 3013352 ACCTTAGTAGCATAATCATTGGTCTTCACAATCACTGCCAGGTACTCTTTCAGACTAGCACGAATAACTGCAAAACACATCATCAATCCAGCTTTTTTTTT-----------------GCTGGAC-CTGGGCATATATAAACTGATTAGAT---------TTAAAAATGAAATAATGAGAGTTTTTTCAGTTGTGTATA---GAAGAGGTGACCCCTGAGACTCGAAATCTCTCAAAAGTCCCGTCTTTCACTTCAGAATCTGAGTTAATTTGCACAGGAAT-ATACTTCTGTGTTTTAATAAAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6005796 272 + 8656713 ACCTTAATAGCATAATCATTGGTCTTCACAATCACTGCCAGGTACTCTTTCAAACTAGCTTGAATAACTGCAAAACACATCATCAACCCAGC--TTTTTTT-----------------GCTGGAC-CTGGGCATATATAAACTGATTAGAT---------TTAAAAATAAAATAATGAGAGTTTTTTCACTTGTGTATA---GAAGAGGTGACCCCTGGGACTCAAAATCTCTCAAAAGTCCTGTCTTTCACTTCAGAATCTGGGTTAATTTGCACAGGAAT-ATACTTCTGTGTTTTAATAAAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129445703 277 - 190850796 ATCTTAGTAGCACAATCATTGGTCTTCACAATCACTGCCAAGTATTCTTTAAAACTAGTCTGAATAACTGCAAAACACATCATCAACAGAGC---TTTTTT-----------------GCTGGGC-CCAGGCAGGT-AAAACTGCTTAGTTaaaaaaaaaaaaaaaaaaaaaaGATCAGAGTTTTCTCTGTTGTGTATA---GAAGAGTTGACCCCTTGGACACAAAATCTCTCAAAAGTCTCATCTTTCACTTCAGAATCTGGGCTAATTTGCATAGAAAT-ATTGTTTTGTGCTTTAATAA-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6520915 260 - 25294431 GTTTTAGTA--------------CTTCACAATCACTGCCAAGTACTCTTT-AAACTAGTTTGAATAACTGCAAAACACATAATCAACAGAGC---TTTTTT-----------------GCTGGGC-CCAGGCATGTAAAAACTTCTTAGTT-----AAAAAAAAAAAAAAAAGGATGAAAGTTTTCTCTGTTGTGTATA---GAAGAGTTGACCCCTTGGATGCAAAATCTCTCAAAAGTCTAATCTTTCACTTCGGAATCTGGGTTAATTTGCATAGAAAC-ATAGTTTTGTGTTTTAATAAAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4075313 275 - 6311556 GTCTTAGTAGCATAATCATTGGTCTTCACAATCACTGCCAAGTGCTCTCTAAAACTAGCCTGAATAGCTGCAAAACACATCATCAACTGAGC---TTTTTT-----------------GCTGGGC-CCAGGCATGTAAAAACTGCTTAGCT-----AAAAAAAGAAAAAGAAGGATGAGACTTTCCTCTGTTGTGTATA---GAAGGGTTGACCCCTTGGACGCAAAATCTCTCAAAAGTCCCATCTTTCACTTCAGAATCTGGGTTAATTTGCATAGAAAT-ATAGTTTTGTGTTTTAATAAAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14931185 270 + 15034901 ATCTTAGTAGCATAATCATTGGTCTTCACAATCACTGCCAAGTACTCTTTAAAACTAGTCTGAATAACTGTAAAACACACCATCAACAGAGC---TTTTTT-----------------GCTGGGC-CTAGGCATGTAAAAACTGCTTAGTT----------AAAAAGAAAAAGGATGAGAGTTTTCTCTGTTGTGTATA---GAAGAGTTGACCCCTTAGACGCAAAATCTCTCAAAAGTCCCATCTTTCACTTCAGAATGTCAGTTAATTTGCATAGAAAT-ATAGTTTTGTGTTTTAATAAAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 953375 236 - 3201129 ------AGAGCCTGATAATAAAGGTTCATTGGTACCGCAAAGTACTTTTTCAAACTAG-----------------------ATCAG--------TTTTCCT-----------------ACTAAGCTCCTGGCAATCATAATCCGCTTGGCT---------------GAAAAAAGTTGAGCGTTCTCTCAGTTGTGTATAGGGGAAGAGTTGGTCATGATGACTCAAAATGTCTCAAGATTTCTGTTGTTCACTTCAGAATCTGAGTTAATTAATACAAAAATGACATTTTTGTGCTTTGATAATT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1775656 270 + 5974691 GCCTTCATAGCCTCATAACAGGGCTCAATTGTTCCCGAAAGCTATTCTTTCAAAGCAGCTTGAGCAACTGTGAACTGCACCATCAAACCAGT---GTCCTT-----------------GCAGGACTCCTGGCACATATAAACTGCTTGACT---------GAGAAAAGAGCAGGA----AATTTTTTCATATATGTACATAAAAAGAGTTGATCCCAAGGACTGCAGATGTCTCAAG-GTCCTGCGTTGCACTTTAGTCTTTCTGCTCATTTACGCAAAGAT-ATTTTTTAGTGTTTTAGTAAAC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26332970 232 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=1019312.000000 s hg38.chr9_KI270719v1_random 56664 92 + 176845 ACATGTAATTTTTCTGTTTTCATCTTGCAAGTAATGACAGCTTTGTTCTCAAACCAATTTTGTTTTTTATAGATTTTACCCTGATATATAAT s panTro5.chr4 135081445 92 + 194502333 ACATGTAATTTTTCTGTTTACATCTTGCAAGTAATGACAGCTTTGTTCTCAAACCAATTTTGTTTTTTATAGATTTTACCCTGATACAATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 61802 91 - 70559 ACATGTAATTTTTCTGTTTTCATCTTGCAAGTAATGACAGCTTTGTTCTCAAACCAATTTTG-TTTTTATAGATTTTACCCTGATATATAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90476273 92 - 115148730 ACATGCAATTTTTCTGTTTTCATCTTGCAGGTAATGACAGCTTTGTTCTCAAAACAATTTTGGTTTTTATAGGTTTTATCCTGATATATAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131417750 92 + 190429646 ACATGTAATTTTTCTGTTTTCATCTTGCAAGTAATGACAGTTTTGTCCTCAAACCAATCTTGTTTTTTATAGATTTTATCCTGATATATAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130936752 92 + 189454096 ACATGTAATTTTTCTGTTTTCATCTTGCAAGTAATGACAGCTTTGTCCTCAAACCAATCTTGTTTTTTATAGATTTTATCCTGATATATAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34928553 92 - 40319822 ACATGTAATTTTTCTGTTTTCATCTTGCAAGTAATGACAGCTTTGTCCTCAAACCAATCTTGTTTTTTATAGATTTTATCCTGATATATAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4482459 92 - 9219162 ACATGTAATTTTTCTGTTTTCATCTTGCAAGTAATGACAGCTTTGTCCTCAAACCAATTTTGTTTTTTATAGATTTTATCCTGATATATAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79007379 92 + 135778131 ACATGTAATTTTTCTGTTTTCATCTTGCAAGTAATGACAGCTTTGTTCTCAAACCAACTTTGTTTTTTATAGATTTTATCCTGATACATAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2777116 92 - 3013352 ACATATAATTTTTGTGTTTTCATCTTGCAAGTAATGACAGCTTTGTCCTCAAACCAATTTTGTTTTTTATAGATTTTATCCTGATATATAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6006068 92 + 8656713 ACATGTAATTTTTCTGTTTTCATCTTGCAAGTAATGACAGCTTTGTTCTCAAACCAATTTTGTTTTTTATAGATTTTATCCTGATATATAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129445980 92 - 190850796 ACATGTAATTTTTCTGTTTTCATCTTGCAAGTAATGACAGCCTTGTTCTCAAACCAATTTTGTTTTTTATAGATTTTATCCTGATATATAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6521175 92 - 25294431 ACATGTGATATTTCTGTTTTCATCTTGCAAGTAATTACAGCCTTGTTCTCATACCAATTTTGTTTTTTATAGATTTTACCCTGATATATAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4075588 92 - 6311556 ACATGTAATTTTTCTGTTTTTATCTTGCAAGTAACGACAGCCTTGTTCTCAAACCAATTTTGTTTTTTATAGATTTTACCCTGATATATAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14931455 92 + 15034901 ACATGTAATTTTTCCGTTTTCATCTTGCAAGTAATGACAGCCTTGTTCTCAAACCAATTTTGCTTTGTATAGATTTTATCCTGATATATAAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26333202 92 - 93316391 ACATGTAGTTTTCCTATTTTAATCATTCAAATAATGACAGCCTTAATCTTAAATGAATTTTGTTTTGTATAGATACTACCATGATATATAAT i micMur3.chr14 I 232 I 110 s otoGar3.GL873702 953611 84 - 3201129 --------TTTTGTTTTTTTAATCTTTAAAACGATGGCAGCCTTAGTTTTAAACCAATTTTGTTTTGTATAGATGTTGTCTGGATCTGTAAT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1775926 90 + 5974691 ACATGCAATCTACCCATTTTATCTTTTCATTTGATAACAGCCTTTCTCTTAAACCAATTTTGTTCTGTATA--TTCTACCCTAATTTATGTT i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=815061.000000 s hg38.chr9_KI270719v1_random 56756 99 + 176845 GAAGAGACAATTACATGATCTGTGTAGA--AATTCTTCCT-CTAAACTAAATTA--T--ACTACCTTAGAAATCTGACATGAAAGTACCAAAACTATGTAAATTCA s panTro5.chr4 135081537 99 + 194502333 GAAGAGACAATTACATGATCTGTGTAGA--AATTCTTCCT-CTAAACTAAATTA--T--ACTACCTTAGCAATCTGACATGAAAGTACCAAAACTATGTAAATTGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 61893 99 - 70559 GAAGAGACAATTACATGATCTGTGTAGA--AATTCTTCCT-CTAAACTAAATTA--T--ACTACCTTAGCAATCTGACATGAAAGTACCAAAACTATGTAAATTGA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90476365 99 - 115148730 GAAGAGACAATTACATGATCTGTGTAGA--AATTCTTCCT-CTAAACTAAATTA--T--ACTGCCTTAGCCATCTGACATGAAAGTACCAGAACCATGTAAATTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131417842 94 + 190429646 GAAGAGGCAATTGCAAGATCTGTGTAGA--AATTCTTCCT------CTAATTTA--T--ACTACCTTTGCAATCTGATATGAAAGTACCAGAACCATGTAAATTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130936844 94 + 189454096 GAAGAGGCAATTGCAAGATCTGTGTAGA--AATTCTTCCT------CTAATTTA--T--ACTACCTTTGCAATCTGATATGAAAGTACCAGAACCATGTAAATTGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34928645 94 - 40319822 GAAGAGGCAATTGCAAGATCTGTGTAGA--AATTCTTCCT------CTAATTTA--T--ACTACCTTTGCAATCTGATATGAAAGTACCAGAACCATGTAAATTGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4482551 94 - 9219162 GAAGAGGCAATTGCAAGATCTGTGTAGA--AATTCTTCCT------CTAATTTA--T--ACTACCTTTGCAATCTGATATGAAAGTACCAGAACCATGTAAATTGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79007471 94 + 135778131 GAATAGGCAATTGCAAGATCTGTGTAGT--AATTCTTCCT------CTAATTTA--T--ACTACCTTTGCAATCTGATATGAAAGTACCAGAACCATGTAAATTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2777208 94 - 3013352 GAAGAGGCAATTGCAAGATCTGTGTAGA--AATTCTTCCT------CTAATTTA--T--ACTACCTTTGCAATCTGATATGAAAGTACCAGAACCATGTAAATTGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6006160 94 + 8656713 GAAGAGGCAATTGCAAGATCTGTGTAGA--AATTCTTCCT------CTAAATTA--T--ACTACCTTTGCAATCTGATATGAAAGTACCAGAACCATGTAAATTGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129446072 95 - 190850796 ----AGACAATTACTTGATCTATGCAGA--AATTCTTCCT-CTAAACTAAATTA--T--ACTACCTTTGCAATCTGACATGAAAATACCAGAACCACGTAAATTGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6521267 95 - 25294431 ----AGACAATGACTTGATCTATGTAGA--AATTCTTCCT-CTAAACTAATTTA--T--ACTGCCTTCGCAATCTGACATGAAAATACCAGAACCATGTAAATTGA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4075680 95 - 6311556 ----AGACAATTACTTGATCTATGTAGA--AATTCTTCTT-CTAAACTAAATTA--T--ACTACCGTCGCAATCTGACATGAAAATACCAGAACCACGTAAATTGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14931547 95 + 15034901 ----AGACAATTACTTGATCTATGTAGA--AATTCGTCCT-CTAAACTAAATTA--T--ACTACCTTTGCGATCTGACATAAAAATGCCAGAACCATGTAAATTGA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 953695 99 - 3201129 --TAGGGAAATTATATGATCTGTATGGG--AATTACCCTTCCTAAACTCAATTATTT--ACTGTCTTTGCAGTAT-CTTTGGACGTACCAGAACCACCTAAGTTGA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1776016 101 + 5974691 ACAGGGGCATTTATATAAGCCGTACAGACTATTTCCCCTC-TTAACCTCAGTTA--TTAGCTACCCCT-TAGCCTGTCACGGAGGTATAAG-ACAATCCAAGTGGA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26333294 110 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055967 104 - 53741614 T a score=14783.000000 s hg38.chr9_KI270719v1_random 56855 2 + 176845 -CT s panTro5.chr4 135081636 2 + 194502333 -CC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 61992 2 - 70559 -CC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90476464 2 - 115148730 -CC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131417936 2 + 190429646 -CC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130936938 2 + 189454096 -CC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34928739 2 - 40319822 -CC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4482645 2 - 9219162 -CC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79007565 2 + 135778131 -CC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2777302 2 - 3013352 -CC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6006254 2 + 8656713 -CC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129446167 2 - 190850796 -CC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6521362 2 - 25294431 -CC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4075775 2 - 6311556 -CC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14931642 2 + 15034901 -CC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 953794 2 - 3201129 -TC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44055863 2 - 53741614 -CC i canFam3.chr19 T 104 C 0 s dasNov3.JH569232 1776117 2 + 5974691 AT- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26333294 110 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=840158.000000 s hg38.chr9_KI270719v1_random 56857 72 + 176845 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATAAGACTTGATTTGGGCAACATAGAAAGTAT s panTro5.chr4 135081638 72 + 194502333 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATATGACTTGATTTGGGCAACATAGAAAGTAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 61994 72 - 70559 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATAAGACTTGATTTGGGCAACATAGAAAGTAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90476466 72 - 115148730 TCACCAAGAAAATTATTACATAAAACGGTGATTCATGGAAATAAGACTTGATTTGGGCAACATAGAATGTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131417938 72 + 190429646 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATAAGACTTGATTTTGGCAACATAGAAAGTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130936940 72 + 189454096 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATAAGACTTGATTTTGGCAACATAGAAAGTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34928741 72 - 40319822 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATAAGACTTGATTTTGGCAACATAGAAAGTAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4482647 72 - 9219162 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATAAGACTTGATTTTGGCAACATAGAAAGTAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79007567 72 + 135778131 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATAAAACTTGATTTTGGCAACATAGAAAGTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2777304 72 - 3013352 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATAAGACTTGATTTTGGCAACATAGAAAGTAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6006256 72 + 8656713 TCACCAAGAAAAATATTACATAAAACAGTGATTCATGGAAATAAGACTTGATTTAGGCAACATAGAAACTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129446169 72 - 190850796 TCACCAAGAAAATTATTATGTAAAACAGTGATTCACAGACATAAGACGTGATTTGGGCAACATAGAAAGTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6521364 71 - 25294431 TCACCAATAAAATT-TTACATAAAACAGTGATTCATGGAAATAGGACACAATTTGGGCAACAGAGAAAGTAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4075777 72 - 6311556 TCACCAAGAAAATTATTACATAAAACAGTGATTCATGGAAATAAGACATGATTTGGACAACATAGAAAGTAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14931644 72 + 15034901 TCACCAAGAAAATTATTACGTAAAACAGTGATTCATGGAAATAAGACGTGATTTGGGCAACATAGGAAGTTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26333404 72 - 93316391 TCACCAAGAGTATCATTACATAAAAAAGTGATTTGTTGAAGCAAGACTTTATTTGGGCAACATAGAAAATGT i micMur3.chr14 I 110 C 0 s otoGar3.GL873702 953796 63 - 3201129 TCTCTGAGGGTATCATTACATAGAAAAGTGGTTT-TTGGACCA-------CTCTAAGCCACATAG-AAATGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44055865 71 - 53741614 TCACCAA-AAGATCCTTACATAAAGCAGTGATTTGTGGGAATAAGACTTGATTTGGGCAACATAAAAAAAAT i canFam3.chr19 C 0 I 213 s dasNov3.JH569232 1776119 70 + 5974691 -CAGCAAAAAGATCATTATATAAAA-AATACCTTGTAGAAATAAGACTTTATTTAGGCAACTTAGAAAATAC i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=185073.000000 s hg38.chr9_KI270719v1_random 56929 23 + 176845 TAAAACTAAA--AAGGAGTTGCTTG s panTro5.chr4 135081710 23 + 194502333 TAAAACTAAA--AAGGAGTTGCTTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 62066 22 - 70559 TAAAACT-AA--AAGGAGTTGCTTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90476538 23 - 115148730 TAAAACTAAA--AAGGAGTTGCTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131418010 23 + 190429646 TAAAACTAAA--AAGGAGTTGCCCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130937012 23 + 189454096 TAAAACTAAA--AAGGAGTTGCTCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34928813 23 - 40319822 TAAAACTAAA--AAGGAGTTGCTCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4482719 23 - 9219162 TAAAACTAAA--AAGGAGTTGCTCG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79007639 23 + 135778131 TAAAACTAAA--AAGGAGTTGCTCG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2777376 23 - 3013352 TAAAACTAAA--AAGGAGTTGTTCG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6006328 23 + 8656713 TAAAACTAAA--AAGGAGTTGCTGG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129446241 23 - 190850796 TAAAAGTAAA--AAGGAGCTGCACG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6521435 23 - 25294431 TAAAGGTAAA--AAGGAGCTGCGTG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4075849 23 - 6311556 TAAAAGTAAA--AAGGAGCTGTACA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14931716 22 + 15034901 TAAA-GTAAA--AAGGAGCTGCATG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26333476 25 - 93316391 TAACAAGAAATCAAGGAGCTTCTCA i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 953859 25 - 3201129 TAACAAGAAATCAAGGAGCTTCTCA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1776189 25 + 5974691 CAGCAGGGAAATAAGGAGATTCATA i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I e canFam3.chr19 44055936 213 - 53741614 I a score=2935831.000000 s hg38.chr9_KI270719v1_random 56952 262 + 176845 AGATAAAG-TTTACCCAAGT----GACAATTTTACCT--GTGACAA-ACATATTTCCATCCACTGCAGTAACAAATGTGTTTAGTTTATT--AAAGTATATGTTTAACAGCAAAAAATAAATAGAATAAATTTATTATCCCTATCCAGTGATAAACACAATTTTAAAATAAAAATAAAAACATCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCGTTAGGCTAAGATATATGGTTATTTCCATGCTTTCAGGATGTGTTTAACAAATCTCTTA s panTro5.chr4 135081733 261 + 194502333 AGATAAAA-TTTACCCAAGT----GACAATTTTACCT--GTGACAA-ACATATTTCCATCCACTGCAGAAACAAATGTGTTTAGTTTATT--AAAGTATATGTTTAACAGCAAAAA-TAAATAGAATAAATTTATTATCCCTATCCAGTGATAAACACAATTTTAAAATAAAAATAAAAACATCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAGATATATGGTTATTTCCATGCTTTCAGGATGTGTTTAACAAATCTCTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 62088 261 - 70559 AGATAAAA-TTTACCCAAGT----GACAATTTTACCT--GTGACAA-ACATATTTCCATCCACTGCAGAAACAAATGTGTTTAGTTTATT--AAAGTATATGTTTAACAGCAAAAAATAAATA-AATAAATTTATTATCCCTATCCAGTGATAAACACAATTTTAAAATAAAAATAAAAACATCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAGATATATGGTTATTTCCATGCTTTCAGGATGTGTTTAACAAATCTCTTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90476561 251 - 115148730 AGATAAAA-CTTACCCAAGT----GACAATTGTACCT--GTGACAA-ACATATTTCCATCCACTGCAGAAACAAATGTGTTTAGTTTATT--AAAG--TATGTTTAACAGCAAAAAATAAATAGAA---------TATCCCTGTCCAATGATAAACACAATTTTAAAATAAAAATAAAAACATCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAGACATATGGTTATTTCCATGCTTTCAGGATGTGTTTAACAAATCTCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131418033 262 + 190429646 AGATAAAA-TTTACCCAAGT----GACAATTTTACCT--GTGACAA-ACATATTTCCATCCACCGCAGAAACAAATGTGTTTGGTTTTTT--AAATTATATGTTTAACAGCAAAAAATAAATATAATAAATTGATTATCCCTCTCCAACAATAAACACAATTTTAAAATAGAAATAAAAACATCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAAATATATGCTTATTTTCATGCTTTCAGGATGTGTTTAACAAATTTCTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130937035 262 + 189454096 AGATAAAA-TTTACCCAAGT----GACAATTTTACCT--GTGACAA-ACATATTTCCATCCACTGCAGAAACAAATGTGTTTGGTTTTTT--AAATTATATGTTTAACAGCAAAAAATAAATATAATAAATTGATTATCCCTCTCCAACAATAAACACAATTTTAAAATAGAAATAAAAACATCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAAATATATGCTTATTTTCATGCTTTCAGGATGTGTTTAACAAATTTCTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34928836 262 - 40319822 AGATAAAA-TTTACCCAAGT----GACAATTTTACCT--GTGACAA-ACATATTTCCATCCACTGCAGAAACAAATGTGTTTGGTTTTTT--AAATTATATGTTTAACAGCAAAAAATAAATATAATAAATTGATTATCCCTCTCCAACAATAAACACAATTTTAAAATAGAAATAAAAACATCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAAATATATGCTTATTTTCATGCTTTCAGGATGTGTTTAACAAATTTCTTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4482742 262 - 9219162 AGATAAAA-TTTACCCAAGT----GACAATTTTACCT--GTGACAA-ACATATTTCCATCCACTGCAGAAACAAATGTGTTTGGTTTTTT--AAATTATATGTTTAACAGCAAAAAATAAATATAATAAATTGATTATCCCTGTCCAACAATAAACACAATTTTAAAATAGAAATAAAAACATCCTACTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAAATATATGCTTATTTTCATGCTTTCAGGATGTGTTTAACAAATTTCTTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79007662 262 + 135778131 AGATAAAA-TTTACTCAAGT----GACAATTTTACCC--ATGACAA-ACATATTTCCATCCACTGCAGAAACAAATGTGTTTGGTTTTTT--AAATTATATGTTTAATAGCAAAAATTAAATATAATAAATTGATTATCCCTCTCCAATGATAAACACAATTTTAAAATAAAAATAAAAATATCCTGCTTA-----------------------------------CATTTGCTACACTATTTCATGCATTAGGCTAAAATATATGCTTATTTCCATGCTTTCAGGATGTGTTTAACAAATTTCTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2777399 262 - 3013352 AGATAAAA-TTTACCCAAGT----GACAATTTTACCT--GTGACAA-ACATATTTCCATCCACTGCAGAAACAAATGTGTTTGGTTTTTT--AAATTATATGTTTAACAGCAAAAAATAAATATAATAAATTGATTATCCCTCTCCAACAATAAACACAATTTTAAAATAGAAATAAAAGCATCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAAATATATGCTTATTTTCATGCTTTCAGGATGTGTTCAACAAATTTCTTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6006351 262 + 8656713 AGATAAAA-TTTACCCAAGT----GACAATTTTACCT--GTGACAA-ACATATTTCCATCCACTGCAGAAACAAATGTGTTTGCTTTATT--AAATTATATGTTTAACAGGAAAAGATACATATAATAAATTGATTATCCCTCTCCAACGATAAATGCAATTTTAAAATAAAAATAAAAACATCCTGCTTA-----------------------------------TATTTACTATACTATTTCATGCACTAGGCTAAGATACATGCTTATTTCCGTGCTTTCAGGATGTGTTTAACAAATCTCTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129446264 263 - 190850796 AGATAGTA-TTTACCCAAGT----CACAGTTTTCCCT--GTGACAAGACATATTTCCATCCACTGCAGAAACAAATGTGTTTAGTTTATT--AAATTATATGTTTAACAGCAAAAAATAAACAGAATTAATTGATTATCCCTATCCATTGATAAACACAATTTTAATATAAAAACAAAAATGTCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATTCATCAGGCTAAGATATATGGTTATTTCTATGCTTTCAGCATGTGCTTAACAAATCTTTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6521458 261 - 25294431 ACATAAAA-CTTACTCAAGT----CATAAGTTTCCCT--GTGACAAAACATATTTCCGTCCAA-GCAGAAGCGAACGTGTTTAGTTTTTT--AAATTATATGTTTAACAGCAAAAAATAAATAGAATAAATTGATTATCCCTAACCATTGATAAACGCaattttaatataaaaat-aaaatGTCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAGACATATGGCTATTTCCATGCTTTCAGCATGCATTTAACAAATCTTTTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4075872 262 - 6311556 AGATAAAA-TTTACTC--GT----CACAATTTTCCCT--GAGACAAGACATATTTCCATCCACTGCAGAAACAAATGTGTTTAGTTTTTTAAAAATTATATATTTAACAGCAAACAGTATATAGAATAAATTGATTATTCCTATCCATTGATAAACACAATTTTAAT-TAAAAATAAAAATGTCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAGATATATGGTTATTTCCAAGCTTTCAGCATGTGTTTAACAAATCTTTTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14931738 259 + 15034901 AGAGAAAA-TTTACCCAAGT----CACAATTTTCCCT--GTGACTAGACATATTTCCATCCACTGCAGAAACAAATGTGTTTAGTTTATT--AAATTATATATTTAACAGCAAAAAATAAATAGAATAAATTGATTATCCCTATCCATTGATAAATACAATTTTAATATAAAAATAAAAATGTCCTGCTTA-----------------------------------TATTTGCTATACTATTTCATGCATTAGGCTAAGATATATGGTTA----CATGCTTTCAGCATGTGTTCAACAAATCTTTTA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26333501 261 - 93316391 AGATAAAA-TTTGCCCAAGT----CACAATTTTACTT--GCAGTAAAACATATTTCCATCCACTGCAGAAACAAATGTGTTTAGTACATT--AATGTACATATTAAA--AAAATAAATACATAGCAAAAATTGAGTATACCTATTCAGTGAAAAACATAATATTAAAATAAAAATACAAATGACCTTTTTA-----------------------------------TATTTGCCATATGATTTCATGTATTAGGCTAAGATATATGGTTACTTCCATACTTTCAGGATGTGTTTAACAAATCTTTTA i micMur3.chr14 C 0 I 103 s otoGar3.GL873702 953884 268 - 3201129 AGATAAAAGTTTACATAATTTCACTGCAGGTTTACTT--GTAGTAGGAGCTATTTCTATTCACTACAGAAACAAACATGTTTATGTCACT--AATTTTTTTGTTTAATGATAGTAAATACATAGCAAAAATTAAGTACCCCTATCTAGTGAAAAACATAATTTTAAAATAAAAATAGAAATTCCCTGGTTA-----------------------------------TATTTGCTCCATGATATTATGCATTAGGCTGAGATGCATGGTTATTTTCATACTTGCAGGAAGTGTTTAACAAATATCTCA i otoGar3.GL873702 C 0 I 4 s canFam3.chr19 44056149 300 - 53741614 AGATAAAA-TTTACTCACAT----GACATTTTTTTTTCCAGGACAAGACATATTTCCATCAATTGCAAAAATAAATATGCTTAGTTCATT--AAGTTATATGCTGAACGGTAATAAATTAGTAGCAGAAATTGACTATGCCTTTTCAGTGACAATCTAAGTTTCTTAATAAAAATACCAATTCCCTGCttatatttactatatgatttattttttttaattttttttatttaCTATATGATTTAATGCATTAGGCTAAAACATACAGTTATTTCTATGTTTTCAGGACATGTTCAACAAATCCCTCA i canFam3.chr19 I 213 I 4 s dasNov3.JH569232 1776214 257 + 5974691 AGATAAAT-TTTGCCCAAGT----AACAATTTTAGCT--GGGAGAATAAACAGTTCCATCCATTGCAGAAACAGACTTGCTTAGTTCAAT--GAGTTACAGGTTGATGAAGAATGAATAAGTAGAAGAAATTGTCTGCACCTTTCCAGTGATAAATAGAATTTTTTAATACAAATAGAATTGCCCTGCTTA-----------------------------------TTATTA-TGTATGATGTCATGCATTAGGTTAAAATATATGGTGATTTCC-----TTCAGGATGTGTTTATCAAATCTTTCA i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=164521.000000 s hg38.chr9_KI270719v1_random 57214 17 + 176845 ----TACATTTTCCTATTGTT s panTro5.chr4 135081994 17 + 194502333 ----TACATTTTCCTATTGTT i panTro5.chr4 C 0 I 3 s gorGor5.CYUI01001450v1 62349 17 - 70559 ----TACATTTTCCTATTGTT i gorGor5.CYUI01001450v1 C 0 I 3 s nomLeu3.chr7b 90476812 17 - 115148730 ----TACATTTTCCTATTGTT i nomLeu3.chr7b C 0 I 7 s rheMac8.chr5 131418295 17 + 190429646 ----TACATTTTCCAATTGTT i rheMac8.chr5 C 0 I 7 s macFas5.chr5 130937297 17 + 189454096 ----TACATTTTCCAATTGTT i macFas5.chr5 C 0 I 7 s macNem1.NW_012010911v1 34929098 17 - 40319822 ----TACATTTTCCAATTGTT i macNem1.NW_012010911v1 C 0 I 7 s cerAty1.NW_012000798v1 4483004 17 - 9219162 ----TACATTTTCCAATTGTT i cerAty1.NW_012000798v1 C 0 I 7 s chlSab2.chr7 79007924 17 + 135778131 ----TACATTTTCCAATTGTT i chlSab2.chr7 C 0 I 7 s manLeu1.NW_012103277v1 2777661 17 - 3013352 ----TACATTTTCCAATTGTT i manLeu1.NW_012103277v1 C 0 I 7 s colAng1.NW_012114544v1 6006613 17 + 8656713 ----TACATTTTTCAATTGTT i colAng1.NW_012114544v1 C 0 I 7 s calJac3.chr3 129446527 1 - 190850796 ----T---------------- i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6521719 17 - 25294431 ----TACATTTTCTCATTGTT i saiBol1.JH378129 C 0 I 7 s cebCap1.NW_016107420v1 4076134 17 - 6311556 ----TACATTTTCTAATTGTT i cebCap1.NW_016107420v1 C 0 I 7 s aotNan1.NW_018507635v1 14931997 17 + 15034901 ----TACATTTTCTCATTGTT i aotNan1.NW_018507635v1 C 0 I 7 s otoGar3.GL873702 954156 17 - 3201129 ----TACGTTTTCCAGTTGTC i otoGar3.GL873702 I 4 C 0 s canFam3.chr19 44056453 17 - 53741614 ----TACATTTTCTAACTGTC i canFam3.chr19 I 4 C 0 s dasNov3.JH569232 1776471 21 + 5974691 TATTTACACTTTCCAATTGTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26333762 103 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 209605 36523 - 1108378 I a score=15561.000000 s hg38.chr9_KI270719v1_random 57231 1 + 176845 A s panTro5.chr4 135082014 1 + 194502333 A i panTro5.chr4 I 3 C 0 s gorGor5.CYUI01001450v1 62369 1 - 70559 A i gorGor5.CYUI01001450v1 I 3 C 0 s nomLeu3.chr7b 90476836 1 - 115148730 A i nomLeu3.chr7b I 7 C 0 s rheMac8.chr5 131418319 1 + 190429646 A i rheMac8.chr5 I 7 C 0 s macFas5.chr5 130937321 1 + 189454096 A i macFas5.chr5 I 7 C 0 s macNem1.NW_012010911v1 34929122 1 - 40319822 A i macNem1.NW_012010911v1 I 7 C 0 s cerAty1.NW_012000798v1 4483028 1 - 9219162 A i cerAty1.NW_012000798v1 I 7 C 0 s chlSab2.chr7 79007948 1 + 135778131 A i chlSab2.chr7 I 7 C 0 s manLeu1.NW_012103277v1 2777685 1 - 3013352 A i manLeu1.NW_012103277v1 I 7 C 0 s colAng1.NW_012114544v1 6006637 1 + 8656713 A i colAng1.NW_012114544v1 I 7 C 0 s calJac3.chr3 129446530 1 - 190850796 A i calJac3.chr3 I 2 C 0 s saiBol1.JH378129 6521743 1 - 25294431 A i saiBol1.JH378129 I 7 C 0 s cebCap1.NW_016107420v1 4076158 1 - 6311556 A i cebCap1.NW_016107420v1 I 7 C 0 s aotNan1.NW_018507635v1 14932021 1 + 15034901 A i aotNan1.NW_018507635v1 I 7 C 0 s tarSyr2.KE944182v1 246128 1 - 1108378 A i tarSyr2.KE944182v1 I 36523 I 7432 s otoGar3.GL873702 954173 1 - 3201129 A i otoGar3.GL873702 C 0 I 5 s canFam3.chr19 44056470 1 - 53741614 A i canFam3.chr19 C 0 I 4 s dasNov3.JH569232 1776492 1 + 5974691 A i dasNov3.JH569232 C 0 I 4 e micMur3.chr14 26333762 103 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I a score=12376.000000 s hg38.chr9_KI270719v1_random 57232 1 + 176845 T s panTro5.chr4 135082015 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 62370 1 - 70559 T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90476837 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131418320 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130937322 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34929123 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4483029 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79007949 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2777686 1 - 3013352 T i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6006638 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129446531 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6521744 1 - 25294431 T i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4076159 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14932022 1 + 15034901 T i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44056475 1 - 53741614 T i canFam3.chr19 I 4 C 0 s dasNov3.JH569232 1776497 1 + 5974691 t i dasNov3.JH569232 I 4 C 0 e micMur3.chr14 26333762 103 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 954174 5 - 3201129 I a score=5752815.000000 s hg38.chr9_KI270719v1_random 57233 574 + 176845 TTTAATATCTTGAATAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GAACCTCAAAGTTTCATAAGCATCTATCCTTCAATATTTAGGCCTAAAAAGTAATCTCCA--TTATCTATCAAATTCTAAATTTGAA-----CTTA--TTATGGTTTACTCCTACTTTTT-AATTATT--ACTTTGGTTAAAGATACTTCATGATATTATT------AAGTTCCTTAG-TAATAATGTATATGGTTGTATTACATTCATTTATCCATC-AAGACTAACT--TTGAGCTACTATGAAATATAATTCAAATCATTCATATAATATCTAATGAATGATTATTATAATACAAAGCACTATACTAGGTTTCATAAGTGATACAAAAACAAGTGCAACCGCCTCAGTAACCAACACATTTGCAGTCTAATAGAGGAAAACAAGCCCTGTTATAAGAATAATTATAGTAAAAGACTATATAAAATACAATCCAT----------------------TTTGACACACACCTTCAACTCTATTTGCTAA--TTCTAATTTTCACTCTT-CAGTTTATTTTTAGATTAAATAGTTATTTTCACAAATCA----GT-CTG-----AGGACAGAG-TTttttgttt s panTro5.chr4 135082016 575 + 194502333 TTTAATATCTTGAGAAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GAACCTCAAAGTTTCATAAACATCTATCCTTCAATATTTAGGCCTAAAAAGTAATCTCCA--TTATCTATCAAATTCTAAATTTGAA-----CTTA--TTATTGTTTACTCCTACTTTTT-AATTATT--ACTTTGGTTAAAGATACTTCATGATATTATT------AAGTTCCTTAACTAATAATGTATATGGCTGTATTACATTCATTTATCCATC-AAAACTAACT--TTGAGCTACTATGAAATATaattcaaatcattcatataatatctaatgaatcattattgtaatgcaaaacactatactaggtttcataagtgatacaaaaacaagtgcaactgcctcagtaaccaacacatttgcagtctaatagaggaaaacaagccctgttataagaatgattatagtaaaaggctatataaaatacaaTCCAT----------------------TTTGACACACACCTTCAACTCTATTTGCTAA--TTCTCATTTTCACTCTT-TAGTTTATTTTTAGATTAAATAGTTATTTTCACAAATCA----GT-CTG-----AGGACAGAG-ttttttgttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 62371 573 - 70559 TTTAATATCTTGAATAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GAACCTCAAAGTTTCATAAACATCTATCCTTCAATATTTAGGCCTAAAAAGTAATCTCCA--TTATCTATCAAATTCTAAATTTGAA-----CTTA--TTATGGTTTACTCCTACTTTTT-AATTATT--ACTTTGGTTAAAGATACTTCATGATATTATT------AAGTTCCTTAC-TAATAATGTATATGGTTGTATTACATTCATTTATCCATC-AAAACTAACT--TTGAGCTACTA-GAAATATaattcaaatcattcatataatatctaatgaatgattattataatacaaagcactatactaggtttcataagtgatacaaaaacaagtgcaaccgcctcagtaaccaacacatttgcagtctaatagaggaaaacaagccctgttataagaataattatagtaaaaggctatataaaatacaaTCCAT----------------------TTTGACACACACCTTCAACTCTATTTGCTAA--TTCTCATTTTCACTCTT-TAGTTTATTTTTAGATTAAATAGTTATTTTCACAAATCA----GT-CTG-----AGGACAGAG-TTttttgttt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90476838 558 - 115148730 TTTAATATCTTGAATAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GAACCTCAAAGTTTCATAAACATCTCTCCTTCAATATTTAGGCCTAA-----AATCTCCA--TTATCTATCAAATTCTAAATTTGAA-----CTTA--TTATTGTTTACTCCTACTTTTT-AATTATT--ACTTTGGTTAAAGATACTTCATGATATTATT------AAGTTCCTTAC-TAATAATGTATATGGTTGTATTACATTCATTTATCCATC-AAAACTAACT--TCGAGCTACTATGAAATATAATTCAAATCATTCATATAATATCTAATGAATGATTATTATAATACAAAGCACTATACTATGTTTCATAAGTGATACAAAAACAAGTGCAACCGCCTCAGTAACCAACACATTTGCAGTCTAATAGAGGAAAACAAGCCCTGTTATAAGAATAATTATAGTAAAATTCTATATAAAATACAATCCAT----------------------TTTGACACACACTTTCAACTCTATTTGTTAG--TTCTCATTTTCACTC------TTTATTTTTAGATTAAATAATTATTTTCACAAATCA----GT-CTG-----AGGACAGAG-T------TTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131418321 572 + 190429646 TTTACTATCTTGAATAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GGACCTCAAAGCTTCATAAACGTCTATCCTTCAATATTTAGGCCTAAAATCTAATCTCCA--TCATCTATCAAATTCTAAATTTTAA-----CTTA--TTATTGTTTACTCCTACTTTTT-AATTATT--ACTTTGGTTAAAGGTACTTCATGATATTATT------AAGTTCCTTAC-TAATAGTATATACGTTTGTATTACATTCATTTATTCATC-AAAACTAACT----GAGCTACTACGAAATATAATtcaaatcatccatatcatatcaaataaatgattattgtaatacaaagtactatattaggtgtcataagcgatacaaaaacaagtgcaactgcctcagtaaccaaaacatttgcagtctaatagaggaaaacaagccgtgttataagaataattatagtaaaaggctaaataaaatacaaTCCAT----------------------TTTGGCACACACCTTCAACTCTATTTGCTGA--TTCTCATTTTCACTCTT-TAGTTTGTTTTTAGATTGAATAATTATTTTCACAAATCA----GC-CTG-----AAGACAGAG-TTTTTTGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130937323 572 + 189454096 TTTACTATCTTGAATAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GGACCTCAAAGCTTCATAAACGTCTATCCTTCAATATTTAGGCCTAAAATCTAATCTCCA--TCATCTATCAAATTCTAAATTTTAA-----CTTA--TTATTGTTTACTCCTACTTTTT-AATTATT--ACTTTGGTTAAAGGTGCTTCATGATATTATT------AAGTTCCTTAC-TAATAGTATATACGTTTGTATTACATTCATTTATTCATC-AAAACTAACT----GAGCTACTACGAAATATAATTCAAATCATCCATATCATATCAAATAAATGATTATTGTAATACAAAGTACTATATTAGGTGTCATAAGCGATACAAAAACAAGTGCAACTGCCTCAGTAACCAAAACATTTGCAGTCTAATAGAGGAAAACAAGCCGTGTTATAAGAATAATTATAGTAAAAGGCTAAATAAAATACAATCCAT----------------------TTTGGCACACACCTTCAACTCTATTTGCTGA--TTCTCATTTTCACTCTT-TAGTTTGTTTTTAGATTGAATAATTATTTTCACAAATCA----GC-CTG-----AAGACAGAG-TTTTTTGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34929124 572 - 40319822 TTTACTATCTTGAATAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GGACCTCAAAGCTTCATAAACGTCTATCCTTCAATATTTAGGCCTAAAATCTAATCTCCA--TCATCTATCAaattctaaattttaa-----ctta--ttattgtttactcctacttttt-aattatt--acttTGGTTAAAGGTACTTCATGATATTATT------AAGTTCCTTAC-TAATAGTATATACGTTTGTATTACATTCATTTATTCATC-AAAACTAACT----GAGCTACTACGAAATATAATtcaaatcatccatatcatatcaaataaatgattattgtaatacaaagtactatattaggtgtcataagcgatacaaaaacaagtgcaactgcctcagtaaccaaaacatttgcagtctaatagaggaaaacaagccgtgttataagaataattatagtaaaaggctaaataaaatacaaTCCAT----------------------TTTGGCACACACCTTCAACTCTATTTGCTGA--TTCTCATTTTCACTCTT-TAGTTTGTTTTTAGATTGAATAATTATTTTCACAAATCA----GC-CTG-----AAGACAGAG-TTTTTTGTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4483030 572 - 9219162 TTTACTATCTTGAATAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GGACCTCAAAGCTTCATAAACGTCTATCCTTCAATATTTAGGCCTAAAACGTAATCTCCA--CCATCTATCAaattctaaattttaa-----ctta--ttattgtttactcctacttttt-aattatt--acttTGGTTAAAGGTACTTCATGATGTTATT------AAGTTCCTTAC-TAATAGTATATACGTTTGTATTACATTCATTTATTCATC-AAAACTAACG----GAGCTACTACGAAATATAATtcaaatcatccatatcatatcaaataaatgattattgtaatacaaagtactatattaggtgtcataagcgatacaaaaacaagtgcaactgcctcagtaaccaaaacatttgcagtctaatagaggaaaacaagccgtgttataagaataattatagtaaaaggctaaataaaatacaaTCCAT----------------------TTTGGCACACACCTTCAACTCTATTTGCTGA--TTCTCATTTTCACTCTT-TAGTTTATTTTTAGATTGAATAATTATTTTCACAAATCA----GC-CTG-----AAGACAGAG-TTTTTTGTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79007950 556 + 135778131 TTTACTATCTTGAATAC--GATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GGACCTCAAAGTTTCATAAACATCTATACTTCAATATTTAGGCCTAAAATGTAATCTCCG--TCATCTATCAAATTCTAAATTTTAA-----CTTA--TTATTGTTTACTCCTAC--------TTATT--ACTTTGGTTAAAGATACTTCACGATATTATT------AAGTTAGTT-----ATAATATATATGTTTGTATTACATTCATTTATTCATC-AAAACTAACT----GAGCTACTATGAAATATAATTCAAATCATCCATATCATATCAAATGAATGATTATTGTAATACAAAGTACTATATTAGGTGTCATAAGCGATACAAAAACAAGTGCAACTGCCTCAGTAACCAAAACATTTGCAGTCTAATAGAGGAAAACAAGCCGTGTTATAAGA------ATAGTAACAGGCTAAATAAAATACAATCCAT----------------------TTTGACACACACCTTCAACTCTATTTGCTAA--TTCTCATTTTCACTCTT-TAGTTTATTTTTAGATTGAATAATTATTTTCACAAATCA----GC-CTG-----AAGACAGAgtttttttgttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2777687 572 - 3013352 TTTACTATCTTGAATAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GGACCTCAAAACTTCATAAACGTCTATCCTTCAATATTTAGGCCTAAAATGTAATCTCCA--CCATCTATCAaattctaaattttaa-----ctta--ttattgtttactcctacttttt-aattatt--acttTGGTTAAAGGTACTTCATGATATTATT------AAGTTCCTTAC-TAATAGTATATACGTTTGTATTACATTCATTTATTCATC-AAAACTAACT----GAGCTACTACGAAATATAATtcaaatcatccatataatatcaaataaatgattattgtaatacaaagtactatattaggtgtcataagcgatacaaaaacaagtgcaactgcctcagtaaccaaaacatttgtagtctaatagaggaaaacaagccgtgttataagaataattatagtaaaaggctaaataaaatacaaTCCAT----------------------TTTGGCACACACCTTCAACTCTATTTGCTGA--TTCTCATTTTCACTCTT-TAGTTTATTTTTAGATTGAATAATTATTTTCACAAATCA----GC-CTG-----AAGACAGAG-TTTTTTGTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6006639 563 + 8656713 TTTACTATCTTGAATAT--AATATTAAATAAAC--ATTTCTACAAATAA-T-TT-GGACCTCAAAGTTGCATAAACATCTCTCCTTCAATATTTAGGCCTAAAACATAATCTCCA--TCATCCATCaaattctaaattttaa-----ctta--ttattgtttactcctactttttaaattatt--aCTTTGGTTAAAGATACTTCATGATATTATT------AAGTTCCTTAC-TAATAATATATATGCTTGTATTATATTCATTTATTCTTC-GAAACT--------GAGCTACTACGAAATATAATTCAAATTATCCATATCATACCA-------GATTATTGTAATACAAAGTACTATATTAGATTTCATAAGAGATACAAAAACAAGTGCAACTGCCTCAGTAACCAAAACATTTGCAGTCTAATAGAGGAAAACAAGTCGTGTTATAAGAATAATTATAGTAAAAGGCTAAATAAAATACAATCCAT----------------------TTTGACACACACCTTCAATTCTATTTGCTAA--TTCTCATTTTCACTCTT-TAGTTTATTTTTGAATTGAATAATTATTTTCACAAATCA----GT-CTG-----AAGACAGAGTTTTTTTGTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129446532 568 - 190850796 TTTAATATCTTGAATAT--AATATTAAATAAGC--ATTTTGACAAATAA-T-TT-GGACCTCAAAGTTTTATAAATATCTATCCTTCAATATCTAGGCCTAACGAGTAGTCTCCA--TTGTCTATCATATTGTAAGTTTGAA-----CTTA--CTGTTGTTTACTTTTACTTTGT-AATTATT--ACTTTGATTAAAGATAATTCATGATATTATT------AAGTTCCTTAG-TAATAATGAATCTGGTTGCATTATGTTCATTTATCCATC-CAAAATCACT--TTGAGTTACTATGAAATATCATTCAAATCCTTCATATAATATCTAGTGAATGAGTATTGTCATACAAAGCACTATACTAGGTTTCATAAGTGATACAAAAACTAGTGCAACTGTCTCATTAACCAAAGTATTTGCAGTCTATTAGAGGAAAACAAGCCCTGTTATAAAAATGATTATAGTAAAAGGCTATATAAAATACAATCCAT----------------------TTTGA-ACATACCTTCAACTCTATTTGCTAA--TTCTCATTTTCACTC------tttatttttatattaaataattattttCACAAATCA----CT-CCA-----ATAACAGAG-TTTTGttttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6521745 570 - 25294431 TTTAATATCTTGAATAT--AATATTAAATAAGC--ATTCTGACAAATAA-T-TT-GTACCTCAAAGTTTTATAAATATCTATCCTTCAATATTTAGGCCTAAAGAGTAGTCTCCA--TCGTCTATCACATTGTAAATTCGAA-----CTTA--CCATTGTTTGCTTTGACTTTGT-AATTGTT--ACTTTGATTAAACATAATTTATGGTATTATT------AAGCTTCTTAC-TAATAATGAATCTGGTTGCATTATGTTCATTTATCCATC-CAAAATCACT--TTGAGTTACTACGAAATATAATTCAAATCATTCATATAA----TAGTGAATGATTATTGTAATGCAAAGCACTATGCTAGGTTTCATAAGTGACACAAACACGAGTGCAACTGTCTCATTGACCAAAGTGTTTGCAGTCTATCAGAGGAAAGCAAGCCCTGTTATAAAAATAATTGTAGTAAAAGGCTATATAAAATACAATCCAT----------------------TTTGACACGTACCTTCAGCTCTATTTGCTAA--TTCTCATTTCCACTCCT-TAGCttatttttatattaaataattattttCACAAATCA----CA-GCA-----ATAATGGAG-TTTGGTTTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4076160 561 - 6311556 TTTAATATCTTGAATAC--AATATTAAATAAGC--ATTTTGACAAATAA-T-TT-GTACCTCAAAATTTTATAAATATCTGTCCTTGAATATTTAGGCCTAAAGAGTAGTCTCCA--TTGTCTATCACATTGTAAATTTGAA-----CTTA--CTATTGTTTGCTTTTACTCTGT-AATTATT--AGTTTGATTAAAGATAATTCA---TATTATT------AAGCTGCTTAT-TAATAATGAATCTGTTTGCATTATGTTCATTTATCCATC-CAAAATCACT--TTGAGTTACTATGAAATATAGTTCAAATCATTCATATAA----TAGTGAATGATGATCGTAATACAAAGCACTATACTAGGTTTCATAAGTGATACAAAAGCAAGTGCAATTGTCTCATTGACCAAAGTATTTGCAGTCTATTAGATGAAAAC-AGCCCTGTTATAAAAATAATTATAGTAAAAGGCTACATAAAATACAATCCAT----------------------TTTGACACATACCGTCAACTCTATTTGCTGA--TTCTCATTTTCACTC------TTTATTTTTATATTAAATAATTATTTTCGCAAATCA----CA-GCA-----ATAACAGAG-TTTTGTTTTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14932023 569 + 15034901 GTTAATATCTTGAATAT--AATATTAAATAAGC--ATTTTGACAAATAA-T-TT-GGACCTCAAAGTTGTATAAATATCTATCCTTCAGTATTTAAGCCTAAAAAGTAGTCTCCA--TTGTCTATCACATTGTAAATTTGAa-----ctta--ttattgtttacttttactttgt-aattatt--actttGATTAAAGATAATTCATGATATTATT------AAGCTCCTTAC-TAATAATGAATCTGGTTGCATTATGTTCATTTATCCATC-CAAAATCACT--TTGAGCTACTATGAAATATaattcaaatcattcatataatatctagtgaatgactattgtaatacaaagcactatactaggtttcataagagatacaaaaacaagtgcaactgtctcattaaccaaagtatttgcagtctattagaggaaaacaagccctgttataaaaataattatagtaaaaggctatataaaatacaaTTCAT----------------------TTTGACACGTACCTTCAACTCTATTTGCTAA--TT---ATTTTCGCTCTT-TAGTTTATTTTTATATTAAATAATTATTTTCACAAATCA----TT-CCA-----ATAACAGAG-TTTTGTTT-- i aotNan1.NW_018507635v1 C 0 I 14 s micMur3.chr14 26333865 557 - 93316391 tttaataacttgaatat--aatattgaaCAAAA--ATTTCTACAAGTAATT-TT-AGAGCTCAAAGTTTTATAAATATCCATCTTTCAATATTTAGACCTAAAAG---AAATCTATATTATCTATCAAATTCTGTATTTGAACTTACCTTA--TTATAGTTTACTCCTACATTTT-AATTCTT--ACCTTGGTTAAAGATACGTCATGATATTATTA--AAAAAGTGCTTTAG-TAATAATTTATC----TGTATTA-----ATTTATCTATCTAAAACTACGT--TTGATCTACTA---AATGTaattcaactca-----acaatatttaacaaatgattattaaagtacaaagcacaatggtaggttctgtgagggatacaataaaaagtacaaCTATCACACTAATCAAAATATTTGCAGTCTAATAGAGCAAAAGAAGCCCTGTTATAAGAATAATTATAGTAAAAGGCTATGTGAAATGCAATCCAT----------------------TTTGAC---TGCCTTCAACTTTATTTGCTAA--TTCTTATTTTTACTC------------TTTAGATTAAGCAACTATTTTTACAAATCACTCCCT-CCA-----AAGGGAGAG-ATCtttgttt i micMur3.chr14 I 103 C 0 s otoGar3.GL873702 954179 547 - 3201129 TTTAATACCTTGAATAT--AAGATTTAATAAAC--ATTTCCACAAATATTT-TT-GTAACTTAATGTTTTATAAATATCCATC---------TTAGACCTAAAAAGTCATCTTTATTTTGTCTATCAAAGTCCAAATTTGAACTTACCTTA--TTACGGCTTATTCCTATCTTTT-AACACTT--GTCTTGGTTAAAGACATTTCATATTATTATC---AAGAAGTGTGTCAG-TAAT-ATTTATCCAATTGTGTTATTTTCATTTATCTATCCTAAAATACCT--TTGATCTGCT----AATGTAACTTATTCCA-----ACAATATTTAAGAAATGATTATTAAAGCACAAAGTACAAGGGTAGGTTTTATGAGGCACACAAT-GAAGGTGCAACGATCCCACTAATCAAAATATTTGCAGGGTAATAGAGGAAAAGTAGCCCTGTTACAAGAATAATTAT----AAAGGCTGTATAAAGCACA----------------------------TTTGAT---GGCCTT-AGCTCTACTTGCCAA--TTCTTGATTTTACTC------TTTATTTTTAGATTAAATAATTATTTTCACAAGTCGCTCCAT-CTG-----AAGTGAGAG-ACTTTT---- i otoGar3.GL873702 I 5 C 0 s canFam3.chr19 44056476 558 - 53741614 TTTAATCTCTTGATTAG--AATATTTAATAAAC--ATTTCTACAAATAA-T-TTCAGACCTCAAAATTTCATAAAGATCAATCCTTCAATATTTAGACCTAAAAAGTAATCTCCA--ATGTCTATCAATTTCCAGATTTGAACTTTCCTCT--TTATTGTTTACTCCTACACTTT-ATTTCTT--ATCCTGGCTAAAGATGCTTCATGATATTATTATCAAGAAATGATTCAG-TAGTAATTTATCTAGTTGTACTATTTTCACTTATCCATC-CAAAGACACCCTTTGAATTGCTGCTAAGTGTATTTTAACTCA-----ACAATATTTAAC-AGTAATTATTAACGTACAAAGCAGTAGGGCAGGTTCTGTGA-----------ACAAGTGTCACTGAACAACTGATCAAAATATTTGCAGTA-AAAGGAGGAAAAGAAGTCCTGTTATAAAGAAAAATATATTTAAAGACTATATAAGGCATAATCCAT----------------------TTTGA---ATGCCTTCAACTCAATTCGCTAA-------------ACTATGAAAGTATCTTTTTAGTTTGAGTAATTATTTTCATATGTCA----GTCCTT-----CTGAAAGAG-ATATTTGTTT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1776498 588 + 5974691 tttaatatttttaatattgaaatttaaaaaGACTTCTTTCCATAAATCA-TGTT-AGACTTCAAAGCTTAAAAAATATTAATCCTTCAAAATTTAGATATAAAAAATAATCTTGT--TTGCCCATCAAATTACAACTTTCAA-----CTTAACTCCTTGTTTATTTCTGTGGTTT-AATTCTTAAACCTTTGTTAATGATGCTTCATAATATTAGTAATAAGAAGCGCATGAG-TAGTAATTTATTCATTTGTATTTTTTTCATTTATCCATCAAAAAATATAT--TTTGACTACTACTAAATGTAGTTCAATTGA-----GCATTATTTAACAAATGATTGTTAATATTCAAAACGCCATGATAAATTATGTGGTGGATACAAAGATAAATATA--TGTCTCACTCATCAAACTATTTGCAGTCTG--AGAGGAAAA--AGCTCTGTT-----GATAAGTATATTAAAAGGCTATATTTCATATATTCTGTTATTCTTATAAAAGAGCAAATATTTGAT---CACCTTCAACTGTATTTGTCAGACTACAAATGCTTACTCTT---------CTTTA----AGATAATTATTTTCCCACTTCA----CA-CCATCTCTGAGAGATAA-TGCTCTATCT i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=-31994.000000 s hg38.chr9_KI270719v1_random 57807 22 + 176845 tg---ttttgttt---------tgttttgttttg s panTro5.chr4 135082591 16 + 194502333 tg---ttttgttt---------tgtttt------ i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 62944 21 - 70559 tg---ttttg-tt---------tgttttgttttg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90477396 16 - 115148730 TG---TTTTGTTG---------TGTTTT------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131418893 12 + 190429646 -----GTTTGCTT---------TCTT-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130937895 12 + 189454096 -----GTTTGCTT---------TCTT-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34929696 12 - 40319822 -----GTTTGCTT---------TCTT-------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4483602 12 - 9219162 -----GTTTGCTT---------TCTT-------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79008506 12 + 135778131 -----gtttgctt---------tctt-------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778259 12 - 3013352 -----GTTTGCTT---------TCTT-------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007202 12 + 8656713 -----GCTTGCTT---------TCTT-------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447100 17 - 190850796 tttcttcttcttc---------ttct-------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6522315 4 - 25294431 ----------------------TCCT-------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4076721 12 - 6311556 -----TTTTCTTC---------TTCT-------- i cebCap1.NW_016107420v1 C 0 C 0 s micMur3.chr14 26334422 18 - 93316391 --------tgtttgtttgtttgtttt-------- i micMur3.chr14 C 0 I 2 s otoGar3.GL873702 954726 4 - 3201129 ----------------------TTTT-------- i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 44057034 15 - 53741614 --TATTTTTTTTT---------TCTT-------- i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1777086 1 + 5974691 -------------------------T-------- i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e aotNan1.NW_018507635v1 14932592 14 + 15034901 I a score=4687372.000000 s hg38.chr9_KI270719v1_random 57829 342 + 176845 ttttTGTGAGTCATCAGCACTATGCAATTGCATATACCTGTCGTGTTTGGTCTACAGAGGCTAAACATCATGTAATAGTTTTTATGCATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGC-AAAACTGAATGAGTTTCCAATAGTC----CAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATAACCTTTTTTACAATGTGTAGATGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTTTGTAATGTCTACTTCACTGAAGAAA s panTro5.chr4 135082607 344 + 194502333 --tttgtgAGTCATCAGCACTATGCAATTGCATATACCTGTTGTGTTTGGTCTACAGAGGCTAAACATTATGTAATAGTTTTTATGCATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGC-AAAACTGAATGAGTTTCCAATAGTCAGTACAAAA-CTACGAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATAACCTTTTTTACAATGTGTAGTTGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGCTGTGTTTAAATATAACTTTTGTAATGTCTACTTCACTGAAGAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 62965 346 - 70559 ttttTGTGAGTCATCAGCACTATGCAATTGCATATACCTGTTGTGTTTGGTCTACAGAGGCTAAACATCATGTAATAGTTTTTATGCATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGC-AAAACTGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATAACCTTTTTTACAATGTGTAGATGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTTTGTAATGTCTACTTCACTGAAGAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90477412 344 - 115148730 --TTTGTGAGTCATCAGCACTATGCAATTGCATATACCTGTTGTGTTTGGTCTACAGATGCTAAACATCATGTAATAGTTTTTATGCATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGC-AAAACTGAATGAGTTTCTAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATAACCTTTTTTACAATGTGTAGATGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTTTGTAATGTCTAGTTCACTGAAGAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131418905 345 + 190429646 --TCTGTGAATCATCAACACTATCCAATTGAATATACCTGTTGTGTTTGGTTTACAGAGGCTAAACATCATGTAATAGTTTTTACACATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGCAAAAACCGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATATCCTTTATTACAATGTGTAGATGCTCAAAGCAAATACAATTGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTTTGTAATGTCTACTTCACTGAAGAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130937907 345 + 189454096 --TCTGTGAATCATCAACACTATCCAATTGAATATACCTGTTGTGTTTGGTTTACAGAGGCTAAACATCATGTAATAGTTTTTACACATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGCAAAAACCGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATATCCTTTATTACAATGTGTAGATGCTCAAAGCAAATACAATTGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTTTGTAATGTCTACTTCACTGAAGAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34929708 345 - 40319822 --TCTGTGAATCATCAACACTATCCAATTGAATATACCTGTTGTGTTTGGTTTACAGAGGCTAAACATCATGTAATAGTTTTTACACATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGCAAAAACCGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACGAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATATCCTTTATTACAATGTGTAGATGCTCAAAGCAAATACAATTGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTTTGTAATGTCTACTTCACTGAAGAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4483614 344 - 9219162 --TCTGTGAATCATCAACACTATCCAATTGAATATACCTGTTGTGTTTGGTTTACAGAGGCTAAACATCATGTAATAGTTTTTACACATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGC-AAAACCGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATATCCTTTATTACAATGTGTAGATGCTCAAAGCAAATACAATTGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTTTGTAATGTCTACTTCACTGAAGAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79008518 344 + 135778131 --tCTGTGAGTCATCAGCACTATGCAATTGCATATACCTGTTGTGTTTGGTCTACAGAGGCTAAACATCATGTAATAGTTTTTACACATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGC-AAAACCGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATATCCTTTATTACAATGTGTAGATGCTCAAAGCAAATACAATTGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTTTGTAATGTCTACTTCACTGAAGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778271 343 - 3013352 --TCTGTGAATCATCAACACTATCCAATTGAATATACTTGTTGTGTTTGGTTTACAGAGGCTAAACATCATGTAATAGTTTTTACACATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGC-AAAACCGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATATCCTTTATTACAATGTGTAGATGCTCAAAGCAAATACAATTGTTTCTC-TTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTTTGTAATGTCTACTTCACTGAAGAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007214 344 + 8656713 --TTTGTGAGTCATCAGCACTATGCAATTGCATATACCTGTTTTGTCTGGTCTACAGAGGCTAAACATCATGTAATAGTTTTTACGCATTTTGTTCATAGGTTA-CTGGGTGCTTTAAGGC-AAAACCGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATCGCATTCAATATTCTTTATTACAATGTGTAGATGCTCAAAGCAAATACAGTTGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAACTTCTGTAATGTCTACTTCACTGAAGAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447117 345 - 190850796 tcttTATGAGGCATCAGCACTATGCAATTGCATATACCGGTTGTCTTTGACCTGCAGAGGCTAAACATCATGTAATAGTTTTTATGCCTTTTGTTCATAGGTTA-CTGGGTGCTTTGAGGC-AAAACTGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTCAGATTTGAATTGCATTCAATATTCTTTATTACAATGTGTAGACGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGTGACTTAAGTTCACAGTGTTGTGTTTAAATATAACTT-TGTAATGTCTACTTTACTGAAGAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6522319 345 - 25294431 TCTTCATGAGGCATCAGCACTATGCAATTGCATATACCTGTTTTCTTTGGCCTACAGAGGCTAAACATCATGTAATAGTTTTTATGTCTTCTGTTCATAGGTTA-CTGGGTGCTTTGAGGC-ACAACTGAATGAGTTTTCACTAGTCAGTACAAAA-CTACAAGATATACAGACACAAAGTGCCTGCGGTTATCCTCAAATGAAGTCAGATTTGAGTTGCATTCAATATAATTTATTACAATGTGTAGATGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGTGACTTAAGTTCACAGGGTTGTGTTTAAATATAACTT-TGTAATGTCTACTTTACTGAAGAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4076733 345 - 6311556 TCTTGATGAGGCATCAGCACTATGCAATTGCATATACCTGTTGTCTTTTGTCTACAGAGGCTAAACATCATGTAATAGTTTTTATGCCTTCTGTTCATAGGTTA-CTGGGTGCTTTGAGGC-ACAACTGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTCAGATTTGAATTGCATTCAATATTCTTTATTACAATGTGTAGACGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGTGACTTAAGTTCACAGTGTTGCGTTTAAATATAACTT-TGTAATGTCTACTTTACTGAAGATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14932606 342 + 15034901 TCTTTATGAGGCATCAGCACTATGCAATTGCATATACCTGTTGTCTTTGGCCTACAGAGGCTAAACATCATGTAATGGTTTTTATGCCTTTTGTTCATAGGTTA-CTGGATGCTTTGAGGC-AAAGCTGAATGAGTTTCCAATAGTCAGTACAAAA-CTACAAGAAATACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTCAGATTTGAATTGCATTCAATATTCTTTATTACAATGTGTAGACGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGTGACTTAAGTTCACAG---TGTGTTTAAATATAACTC-TGTAATGTCTACTTTACTGAAGAAA i aotNan1.NW_018507635v1 I 14 C 0 s micMur3.chr14 26334442 346 - 93316391 tttttgAGAGTTATCAGCACTATGGAATTGCACATACCTGGTATGTCTGCTCTACAGAGGCTAATCATCATGTAATAGTTTTTATGCTTTCTGTTCTGAGGTTA-GTGAGCGCTTTGAGGC-AAAACTGAATGAGTTTCCATTAGCCAGTACAAAA-TTACAAGAAGTACAGACACAAAGTGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATATTCTTTATTACAATGTGTGGATGCTCAGAGCAAATACAATAGTTTCTCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAGCTTTTGTAATGTCTACTTCACTGAAGAAA i micMur3.chr14 I 2 I 260 s otoGar3.GL873702 954733 345 - 3201129 TTTTTGAGAGTCATC-GCACTGTACAATTGCATAAACCTGATACGTCTGGTCTACAGAGGCTAATCATCATGTAATAGTTTTTATGCTCTTTGTTCTAAGGTTA-GTGTGAGCTTTGAGGC-AAAACTGAATGAGTTTCCATTAGCCAGTACAAAA-TTACGAGAAGTACAGACACAAAGTGCCCGGGGTTATCCTCAAATGAAGTTACATTTGAATTGCATTCAATATCCTTTATTACAATGTGTGGATGCTCAAAGCAAATACAATACTTTCCCTTTGCCTCTGTGACTTGAGTTCATAGTGTTGTGTTTAAATATAGCTTTTGTAATGTTGGCTTCCCTGAAGAAA i otoGar3.GL873702 I 3 I 11 s canFam3.chr19 44057050 341 - 53741614 ----TGTGAGTCATGAACACTATGCAATTGTCCATACCTGTTGTGTCTGGCCTAAAGAGACTAATAATCACACAATAGTTTTTGCACTTTTTGGTCTGATGTTA-GTGGGTGCTTTGAGGC-AAAACTGAATGAATTTCCAATAGCCAGT-CCAAA-TTACAAGAAATACAGACACAAAATGCCTGGGGTTATCCTCAAATGAAGTTACATTTGAATTGCATCCAATATCCTTTATTACGATGTGGAAATGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGACACTTAAGTTCACAGTGTTAGGTTTAAATATAACTTTTGTAATGGCTACTTCACTGAGGAAA i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1777087 345 + 5974691 --TCTGTGTGTCATCAGGTTTATGTAATTTCACATACCTGGTTTGTCTGGT-TACAGAGGCTAATCATCACATAATAGTTTTTATGCTTTTTGGTCTGAGGTTAGTTGGGTGCTTTGAGGC-AAAACTGAATGAGTTTCCAATAGCCAGTTTAAAATTTACAAGAAATACAGACACAAAATGCCTGGGGTTATCCTCAAATGAAGTTAGATTTGAATTGCATTCAATGTTCTTTATTACAATGTGTGGATGCTCAAAGCAAATACAATAGTTTCTCTTTGCCTCTGTGATTTGATTTCATAGTGTTGTGCTTAAATATAACTTTTGTAATGTCTACTTCACTTAATAAA i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=1337922.000000 s hg38.chr9_KI270719v1_random 58171 139 + 176845 CTTT-TAAAAA-AT-TTGACTT---ATAAT---G---GTTTTCTGTAACAACCTA-TGGTGCTTGGTTTGTAAAGTAAAACAG-GAACTCAATTTAGTACCTACTGAATAATAACATTTT-TT--AACTGAGATTCCACTCAT-AAAGCACCTAAAT s panTro5.chr4 135082951 139 + 194502333 CTTT-TAAAAA-AT-TTGACTC---ATAAT---G---ATTTTCTGTAATAACCTA-TGGTGCTTGGTTTGTAAAGTAAAACAG-GAACTCAATTTAGTACCTACTGAATAATAACATTTT-TC--AACTGAGATTCCACTCAT-AAAGCACCTAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63311 138 - 70559 CTTT-TAAAAA-AT-TTGACT----ATAAT---G---GTTTTCTGTAACAACCTA-TGGTGCTTGGTTTGTAAAGTAAAACAG-GAACTCAATTTAGTACCTACTGAATAATAACATTTT-TT--AACTGAGATTCCACTCAT-AAAGCACCTAAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90477756 139 - 115148730 C--T-TAAAAA-AT-TTGACTC---ATAAT---G---ATTTTCTTTAATAACCTA-TGGTGCTTGGTTTGTAAAGTAAAACAG-GGACTCAATTTAGTACCTACTGAATAATAATATTTT-TTTCAACTGAGATTCCACTCAT-AAAGCACTTAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419250 139 + 190429646 C-TT-TAAAAA-AA-TTAACTC---ATAAT---G---ATTTTCTGTAATAACCTA-TGGTGCTTGGCTTGTAGGGTAAAACAGCAAACTCAATTTAATACCTACTGAATAATAACATTTT-CC--AAATGAGATTCCACTCAT-AAAGCACTTAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938252 139 + 189454096 C-TT-TAAAAA-AA-TTAACTC---ATAAT---G---ATTTTCTGTAATAACCTA-TGGTGCTTGGCTTGTAGGGTAAAACAGCAAACTCAATTTAATACCTACTGAATAATAACATTTT-CC--AAATGAGATTCCACTCAT-AAAGCACTTAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930053 139 - 40319822 C-TT-TAAAAA-AA-TTAACTC---ATAAT---G---ATTTTCTGTAATAACCTA-TGGTGCTTGGCTTGTAGGGTAAAACAGCAAACTCAATTTAATACCTACTGAATAATAACATTTT-CC--AAATGAGATTCCACTCAT-AAAGCACTTAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4483958 139 - 9219162 C-TT-TAAAAA-AA-TTAACTC---ATAAT---G---ATTTTCTGTAATAACCTA-TGGTGCTTGGCTTGTAGGGTAAAACAGCAAACTCAATTTAATACCTACTGAATAATAACATTTT-CC--AACTGAGATTCCACTCAT-AAAGCACTTAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79008862 139 + 135778131 C-TT-TAAAAA-AA-TTAAATC---ATAAT---G---ATTTTCTGTAATAACCTA-TGGTGCTTGGCTTGTAGGGTAAAACAGCAAACTCAATTTAACACCTACTGAATAATAACATTTT-TC--AACTGAGATTCCACTCAT-AAAGCATTTAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778614 139 - 3013352 C-TT-TAAAAA-AA-TTAACTC---ATAAT---G---ATTTTTTGTAATAACCTA-TGGTGCTTGGCTTGTAGGGTAAAACAGCAAACTCAATTTAATACCTACTGAATAATAACATTTT-CC--AACTGAGATTCCACTCAT-AAAGCACTTAAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007558 140 + 8656713 C-GT-TACAAA-AATTTAACTC---ATAAT---G---ATTTTCTGTAATAACCTA-TGGTGCTTGGCTTGTAGAGTAAAACAGCAAACTCAATTTAATACCTACTGAATAATAACATTTT-TC--AACTGAGATTCCACATAT-AAAGCACTTAAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447462 139 - 190850796 C-TC-AAAAAA-AT-TGGACTC---ATAAT---G---ATTTTCTGTAATAACCTA-CGGTGCTTGGTTTGTAGGGTAAAACAGGAAATTCAATTTAGTACCAACTGAATAATAAAATTTT-TC--AATTGAGGTTCCACTCAT-AAAGCACTTAAAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6522664 139 - 25294431 C-TT-AAAAAA-AA-TGGACTC---ATAAT---G---ATTTTCTGTAATAACCTA-CGGTGCTTGGTTTGTAGGGTAAAACAGGAAATTCAATTTAGTACCAACTGAATAATAAAATTTT-TC--AATTGAGGTTCCACTCAT-AAAGCACTTACAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4077078 139 - 6311556 C-TT-TAAAAA-AT-TGGACTC---ATAAT---G---ATTTTCTGTAATAACCTA-CGGTGCTTGGTTTGTAGGGTAAAACAGGAAATTCAATTTAGTACCAATTGAATAATAAAATTTT-TC--AATTGAGGTTCCACTCAT-AAAGCACTTAAAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14932948 140 + 15034901 C-TTGAAAAAA-AT-TGGACTC---ATAAT---G---ATTTTCTGTAATAACCTA-CGGTGCTTGGTTTGTAGGGTAAAACAGGAAATTCAATTTAGTACCAACTAAACAATAAAATTTT-TC--AATTGAGTTTCCACTCAT-AAAGCACTTAAAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 955089 144 - 3201129 C-CA-CAAAAA-AC-AAGACTT---ACAACAAGA---ATTTTCTGTACTGACTTATTAGTGATTGGTTTGTCAGGTAAAACACGGGATTTCAGATAACTCCAATTGAATAAACAAATTTA-TC--AATGGGGACTTTATTCATAAAAACATTTAAAT i otoGar3.GL873702 I 11 I 2527 s canFam3.chr19 44057391 145 - 53741614 C-TT-GAAAAATAT-TTCATGC---AGAAT---GACAATTTTCTGTAATAACCTATTAGAGTTTTGTTTGTAGGGCAAAACCGGGATCTCAATATAATATGAATTGAATAACAAAATTTTATC--AATTGAGATTCCACTCAT-AAGCTATTTAAGT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1777432 140 + 5974691 --CT-TAAAAA-AT-TGGACTCAGAAAAAC---A---ATTTTGTGTAATAACCTATTGGAGATTGGTTTGTAAGGTAAAGCAGAGGTCTCAATATAACACCAAATGAACAATAAAACTTTAGG--AGTTGGGGTTCCACTCAG-AAAATATTAT--- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26334788 260 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=1085231.000000 s hg38.chr9_KI270719v1_random 58310 124 + 176845 GTTTAAA--GTTAAAGCATATTATGTTGATATTAAATTTAA--AAAGAA----CAAG-TTAGAGAAGAAATAAAGAAAAAAAACTTCGGAGAATAAACTGCTTCCAAGTATACAAGTACTAAACAGGCTATAC- s panTro5.chr4 135083090 127 + 194502333 TTTTAAA--GTTAAAACATATTATATTGACATTAAATTTAA--AAAGAATAAACAAG-TTAGAGAAGAAATAAA-AAAAAAAACTTCGGAGAATAAACTGCTTCCAAGTATACAAGTACTAAAGAGGCTACAC- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63449 127 - 70559 TTTTAAA--GTTAAAGCATATTATATTGACATTAAATTTAA--AAAGAATAAACAAG-TTAGAGAAGAAATAAA-AAAAAAAACTTCGGAGAATAAACTGCTTCCAAGTATACAAGTACTAAAGAGGCTACAC- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90477895 110 - 115148730 TTTTA--------------------TTTACATTAAATTTAA--AAAGAATAAACAAG-TTAGACAAGAAATTAAAAAAAAAAACTTCGGAGAATAAACTGCTTCCAAGTATACAAGTACTAAAGAGGCTACAC- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419389 128 + 190429646 TTTTAAA--GTTAAAACATATTATATTGACATTAAATTTAA--AAAGAATAAACAAG-TTAGAGAAGAAATAATTTTAAAATACTTCAGAGAATAAACTGCTTCCAAGTATAAAAGTACCAAAGAGGCTATAC- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938391 128 + 189454096 TTTTAAA--GTTAAAACATATTATATTGACATTAAATTTAA--AAAGAATAAACAAG-TTAGAGAAGAAATAATTTTAAAATACTTCAGAGAATAAACTGCTTCCAAGTATAAAAGTACTAAAGAGGCTATAC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930192 128 - 40319822 TTTTAAA--GTTAAAACATATTATATTGACATTAAATTTAA--AAAGAATAAACAAG-TTAGAGAAGAAATAATTTTAAAATACTTCAGAGAATAAACTGCTTCCAAGTATAAAAGTACTAAAGAGGCTATAC- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484097 128 - 9219162 TTTTAAA--GTTAAAACATATTATATTGACATTAAATTTAA--AAAGAATAAACAAG-TTAGAGAAGAAATAATTTTAAAATACTTCAGAGAATAAACTGCTTCCAAGTATAAAAGTACTAAAGAGGCTATAC- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009001 128 + 135778131 TTTTAAA--GTTAAAACATATTATATTGACATTAAATTTAA--AAAGAATAAACAAG-TTAGAGAAGAAATAATTTTAAAATACTTCAGAGAATAAACTGCTTCCAAGTATAGAAGTACTAAAGGGGCTATAC- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778753 128 - 3013352 TTTTAGA--GTTAAAGCATATTATATTGATATTAAATTTAA--AAAGAATAAACAAG-TTAGAGAAGAAATAATTTTAAAATACTTCAGAGAATAAACTGCTTCCAAGTATAAAAGTACTAAAGAGGCTATAC- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007698 128 + 8656713 TTTTAAA--GTTAAAACATATTATATTGACATTAAATTTAA--AAAGAATAAACAAG-TTAGAGAAGAAATAATTTTTAAAAACTTCAGAGAATAAACTGCTTCCAAGTATAGAAGTACTAAAGAGGCTATAC- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447601 126 - 190850796 TTTTTAG--GTTAAAACATATTACATTGATGTTAAATTTAA--AAAGAAT-AACAAG-TTATAGAAGAAATAATTTTAAAA-ACTTCAGAGAATAAACTGCTTCCAAGTATACAAGTACTAAAGAGACTGCAC- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6522803 127 - 25294431 TTTTTAA--GTTAAAACGTATTATATTGATGTTAAATTTAA--AAAGAATAAACAAG-TTGTAGAAGAAATAATTTTAAAA-ACTTCAGAGAATAAACTGCTTCCAAGTATATAAGCACTAAAGAGATTGCAC- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4077217 127 - 6311556 TTTTTAA--GAAAAAACATATTATATTGATGTTAAATTTAA--AAAGAATAAACAAG-TTATAGAAGAAATAATTTTAAAA-ACTTCAGAGAATAAACTACTTCCAAGCATACAAGTATTAAAGAGACTGCAC- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14933088 127 + 15034901 TTTTTAA--GTTAAAACATATTATATTGATGTTAAATTTAA--AAAGAATAAACAAG-TTTTAGAAGAAATAGTTTTAAAA-ACTTCAGAGAATAAACTGCTTCCAAGTATACAAGTACTAAAGAGACTGCAC- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44057536 123 - 53741614 TGTTCAG--GTTAAAAAATTTCATATTAGCATTAAATTT----AAAGCATAGACATG-CTGGAGGAGAAATAATAAAAATA-TCTTTAGAGAATAAACTGTTTTCAAGGATCCAAGTATT--AGATGCCACAT- i canFam3.chr19 C 0 I 5 s dasNov3.JH569232 1777572 117 + 5974691 CATTAAATTATTAAAGCAGATCATATTAGTATTAAACTAAATTAAAAGATAAACATGATTGGAGGTCAAATAATAAAAAAA----------AATA---TGCTTTCCAG----AAGGTATTAAAGAAGGTACATC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26334788 260 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 955233 2527 - 3201129 I a score=314702.000000 s hg38.chr9_KI270719v1_random 58434 25 + 176845 ACTGGTATGCTCATTATAAATAAAA s panTro5.chr4 135083217 25 + 194502333 ACTGGTATGCTCATTATAAATAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63576 25 - 70559 ACTGGTATGCTCATTATAAATAAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478005 25 - 115148730 ACTGGTATGCTCATTATAAATAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419517 25 + 190429646 ACTGGTATGCTCATTATAAATAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938519 25 + 189454096 ACTGGTATGCTCATTATAAATAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930320 25 - 40319822 ACTGGTATGCTCATTATAAATAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484225 25 - 9219162 ACTGGTATGCTCATTATAAATAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009129 25 + 135778131 ACTGGTATGCTCATTATAAATAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778881 25 - 3013352 ACTGGTATGCTCATTATAAATAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007826 25 + 8656713 ACTGGTATGCTCATTATAAATAAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447727 25 - 190850796 ACTGGTGTGCTCATTATAAATAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6522930 25 - 25294431 ATTGGTGTGCTCGTTATAAATAAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4077344 25 - 6311556 ACTGATGTGCTCATTATAAATAAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14933215 25 + 15034901 CCTGGTGTGCTCATTATAAATAAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26335048 25 - 93316391 ACTGGTATGCTCATTATAAATAAAA i micMur3.chr14 I 260 I 2485 s canFam3.chr19 44057664 25 - 53741614 GTTTGTGTGATCATTATAAATAAAA i canFam3.chr19 I 5 C 0 s dasNov3.JH569232 1777689 25 + 5974691 ACTTGTATTCTCATAATAAACAAAA i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 955233 2527 - 3201129 I a score=92455.000000 s hg38.chr9_KI270719v1_random 58459 10 + 176845 ACATTCATTC- s panTro5.chr4 135083242 10 + 194502333 ACATTCATTC- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63601 10 - 70559 ACATTCATTC- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478030 10 - 115148730 ACATTCATTC- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419542 10 + 190429646 ACATACATTC- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938544 10 + 189454096 ACATACATTC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930345 10 - 40319822 ACATACATTC- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484250 10 - 9219162 ACATACATTC- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009154 10 + 135778131 ACATACATTC- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778906 10 - 3013352 ACATACATTC- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007851 10 + 8656713 ACATACATTC- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447752 10 - 190850796 ACATACATTC- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6522955 10 - 25294431 ACATACATTC- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4077369 10 - 6311556 ACATACATTC- i cebCap1.NW_016107420v1 C 0 I 602 s aotNan1.NW_018507635v1 14933240 10 + 15034901 ACATACGTTC- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44057689 10 - 53741614 ACACACATTT- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1777714 9 + 5974691 --ACACACTAC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26335073 2485 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 955233 2527 - 3201129 I a score=42930.000000 s hg38.chr9_KI270719v1_random 58469 4 + 176845 ATGT s panTro5.chr4 135083252 4 + 194502333 ATGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63611 4 - 70559 ATGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478040 4 - 115148730 ATGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419552 4 + 190429646 ATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938554 4 + 189454096 ATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930355 4 - 40319822 ATGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484260 4 - 9219162 ATGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009164 4 + 135778131 ATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778916 4 - 3013352 ATGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007861 4 + 8656713 ATGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447762 4 - 190850796 ATGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6522965 4 - 25294431 ATGT i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14933250 4 + 15034901 ATGT i aotNan1.NW_018507635v1 C 0 I 2905 s canFam3.chr19 44057699 4 - 53741614 GTGT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1777723 4 + 5974691 ATGT i dasNov3.JH569232 C 0 I 4 e micMur3.chr14 26335073 2485 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 955233 2527 - 3201129 I e cebCap1.NW_016107420v1 4077379 602 - 6311556 I a score=39227.000000 s hg38.chr9_KI270719v1_random 58473 11 + 176845 C--ATTTTATCTC s panTro5.chr4 135083256 11 + 194502333 C--ATTTTATCTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63615 11 - 70559 C--ATTTTATCTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478044 11 - 115148730 C--ATTTTATCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419556 13 + 190429646 CATATCTTAGGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938558 13 + 189454096 CATATCTTAGGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930359 13 - 40319822 CATATCTTAGGTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484264 13 - 9219162 CATATCTTAGGTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009168 13 + 135778131 CATATCTTAGGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778920 13 - 3013352 CATACCTTAGGTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007865 13 + 8656713 CGTATCTTAGGTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447766 13 - 190850796 AATGCTTTACCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6522969 13 - 25294431 AATGTTTTACCTC i saiBol1.JH378129 C 0 C 0 s canFam3.chr19 44057703 13 - 53741614 CATATTTTAATAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1777731 11 + 5974691 --TATTTTAAGCA i dasNov3.JH569232 I 4 C 0 e micMur3.chr14 26335073 2485 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 955233 2527 - 3201129 I e aotNan1.NW_018507635v1 14933254 2905 + 15034901 I e cebCap1.NW_016107420v1 4077379 602 - 6311556 I a score=41338.000000 s hg38.chr9_KI270719v1_random 58484 5 + 176845 ATTAC s panTro5.chr4 135083267 5 + 194502333 ATTAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63626 5 - 70559 ATTAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478055 5 - 115148730 ATTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419569 5 + 190429646 ATTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938571 5 + 189454096 ATTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930372 5 - 40319822 ATTGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484277 5 - 9219162 ATTGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009181 5 + 135778131 ATTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778933 5 - 3013352 ATTGC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007878 5 + 8656713 ATTAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447779 5 - 190850796 ATTAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6522982 5 - 25294431 ATTAT i saiBol1.JH378129 C 0 I 583 s cebCap1.NW_016107420v1 4077981 5 - 6311556 ATTAC i cebCap1.NW_016107420v1 I 602 C 0 s canFam3.chr19 44057716 5 - 53741614 ATTAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1777742 5 + 5974691 ATTAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26335073 2485 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 955233 2527 - 3201129 I e aotNan1.NW_018507635v1 14933254 2905 + 15034901 I a score=10920.000000 s hg38.chr9_KI270719v1_random 58489 1 + 176845 T s panTro5.chr4 135083272 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63631 1 - 70559 T i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478060 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419574 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938576 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930377 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484282 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009186 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778938 1 - 3013352 T i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007883 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129447784 1 - 190850796 T i calJac3.chr3 C 0 I 5338 s saiBol1.JH378129 6523570 1 - 25294431 T i saiBol1.JH378129 I 583 C 0 s cebCap1.NW_016107420v1 4077986 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 C 0 s canFam3.chr19 44057721 1 - 53741614 T i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1777747 1 + 5974691 T i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26335073 2485 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 955233 2527 - 3201129 I e aotNan1.NW_018507635v1 14933254 2905 + 15034901 I a score=283475.000000 s hg38.chr9_KI270719v1_random 58490 39 + 176845 ACATATTTA-AAATAATCTCTTATCATTATAGTAGGCCAT s panTro5.chr4 135083273 39 + 194502333 ACATATTTA-AAATAATCTCTTATCATTATAGTAGGCCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63632 39 - 70559 ACATATTTA-AAATAATCTCTTATCATTATAGTAGGCCAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478061 39 - 115148730 ACATATTTA-AAATAATCTCTTATCATTATAGTAGGCCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419575 39 + 190429646 ACGTATTTA-AAATAATTTCTTATCATTATAGTAGGcaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938577 39 + 189454096 ACGTACTTA-AAATAATTTCTTATCATTATAGTAGGcaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930378 39 - 40319822 ACGTATTTA-AAATAATTTCTTATCATTATAGTAGGcaat i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484283 39 - 9219162 ACATATTTA-AAATAATTTCTTATCATTATAGTAGGcaat i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009187 39 + 135778131 ACATATTTA-AAATAATTTCTTATCATTATAATACGcaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778939 39 - 3013352 ACGTATTTA-AAATAATTTCTTATCATTATAGTAGGcaat i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007884 39 + 8656713 ACATATTTA-AAATAATTTCTCATCATTATAGTAGGcaat i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6523571 39 - 25294431 GCATATTCA-AAATAATTTATTATCATTATAATAGGCAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4077987 39 - 6311556 GCATATTCA-AAATAATTTATTATCATTATAATAGGCAAT i cebCap1.NW_016107420v1 C 0 C 0 s canFam3.chr19 44057722 39 - 53741614 ACATATCCA-CAAACATTTATTATTGTCTTCATAGGTAAT i canFam3.chr19 C 0 I 1736 s dasNov3.JH569232 1777748 40 + 5974691 GCATATTAACAAACAATTTCTCCTTGTTCTAATAGTCAAT i dasNov3.JH569232 C 0 I 3290 e micMur3.chr14 26335073 2485 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 955233 2527 - 3201129 I e aotNan1.NW_018507635v1 14933254 2905 + 15034901 I e calJac3.chr3 129447785 5338 - 190850796 I a score=7800.000000 s hg38.chr9_KI270719v1_random 58529 1 + 176845 C s panTro5.chr4 135083312 1 + 194502333 C i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63671 1 - 70559 C i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478100 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419614 1 + 190429646 c i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938616 1 + 189454096 c i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930417 1 - 40319822 c i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484322 1 - 9219162 c i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009226 1 + 135778131 c i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778978 1 - 3013352 c i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007923 1 + 8656713 c i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6523610 1 - 25294431 C i saiBol1.JH378129 C 0 I 2225 s cebCap1.NW_016107420v1 4078026 1 - 6311556 C i cebCap1.NW_016107420v1 C 0 I 2243 e micMur3.chr14 26335073 2485 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44057761 1736 - 53741614 I e otoGar3.GL873702 955233 2527 - 3201129 I e aotNan1.NW_018507635v1 14933254 2905 + 15034901 I e calJac3.chr3 129447785 5338 - 190850796 I a score=16562.000000 s hg38.chr9_KI270719v1_random 58530 2 + 176845 at s panTro5.chr4 135083313 2 + 194502333 at i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63672 2 - 70559 at i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478101 2 - 115148730 at i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419615 2 + 190429646 at i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938617 2 + 189454096 at i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930418 2 - 40319822 at i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484323 2 - 9219162 at i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009227 2 + 135778131 at i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778979 2 - 3013352 at i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007924 2 + 8656713 at i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6525836 2 - 25294431 at i saiBol1.JH378129 I 2225 C 0 s cebCap1.NW_016107420v1 4080270 2 - 6311556 at i cebCap1.NW_016107420v1 I 2243 C 0 s aotNan1.NW_018507635v1 14936159 2 + 15034901 at i aotNan1.NW_018507635v1 I 2905 C 0 e micMur3.chr14 26335073 2485 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44057761 1736 - 53741614 I e otoGar3.GL873702 955233 2527 - 3201129 I e calJac3.chr3 129447785 5338 - 190850796 I a score=179767.000000 s hg38.chr9_KI270719v1_random 58532 19 + 176845 tttccaaatagcatcaaga s panTro5.chr4 135083315 19 + 194502333 tttccaaatagcatcaaga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63674 19 - 70559 tttccaaatagcatcaaga i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478103 19 - 115148730 tttccaaatagcatcaaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419617 19 + 190429646 tttccaaatagcatcaaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938619 19 + 189454096 tttccaaatagcatcaaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930420 19 - 40319822 tttccaaatagcatcaaga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484325 19 - 9219162 tttccaaatagcatcaaga i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009229 19 + 135778131 tttccaaatagcatcaaga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2778981 19 - 3013352 tttccaaatagcatcaaga i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007926 19 + 8656713 tttccaaatagcatcaaga i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129453123 19 - 190850796 tttccaaatagcagcaaga i calJac3.chr3 I 5338 C 0 s saiBol1.JH378129 6525838 19 - 25294431 gttccaaatagcatcaaga i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4080272 19 - 6311556 tttccaaatagcatcaaga i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14936161 19 + 15034901 tttccaaacagcatcaaga i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26335073 2485 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44057761 1736 - 53741614 I e otoGar3.GL873702 955233 2527 - 3201129 I a score=2912365.000000 s hg38.chr9_KI270719v1_random 58551 342 + 176845 atccttattttgaaatagtaatcagatcatgtagttctcctgatcagatctcttcacactctagaataatatgcataccttcattttagcttttagacttttttctgatctagctctagattattgtttgatctcat-ttttactattcttctcattgctcattcaattcaatttcaagcataatgattttttgctctttttggaatacact--agctttttgatttcattagagcctgtacacttccctcttcctgaaatgttcttccc-caaatttatgtatagcttatt--ctctctttgttcagggctcagtgtaattgtag---------------------attgttctctaccttgaatatg s panTro5.chr4 135083334 344 + 194502333 atccttattttgaaacagtaatcagatcatgtagttctcctgatcagatctcttcacactttagaataagatgcatatcttcattttagcttttagacttttttctgatctagctctagattattgtttgacctcat-ttttactattcttctcattgctcattcaattcaatttcatgcataatgattttttgccctttttggaatacact--agctttttgatttcattagagcctgtacacttccctcttcctgaaatgttcttccc-caaatttatgtatagcttattttctctctttgttcagggctcagtgtaattgtag---------------------attgttctctaccttgaatatg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 63693 343 - 70559 atccttattttgaaacagtaatcagatcatgtagttctcctgatcagatctcttcacactttagaataagatgcatatcttcattttagcttttagacttttttctgatctagctctagattattgtttgatctcat-ttttactattcttctcattgttcattcaattcaatttcaagcataatgattttttgctctttttggaata-act--agctttttgatttcattagagcctgtacacttccctcttcctgaaatgttcttccc-caaatttatgtatagcttattttctctctttgttcagggctcagtgtaattgtag---------------------attgttctctaccttgaatatg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478122 344 - 115148730 atccttattccgaaacagtaatcagatcatgtagttctcctgatcagatctctccacacttcagaataagatgcatatcttcattttagcttttagacttttttctgatctagctctagatcattgtttgacctcat-ttttactattcttctcattgctcattcaattcaatttcaggcataatgattttttgctcttttttgaatacact--agcttttttatttcattagagcctgtacacttccctcttcctgaaatgttattccc-caaatttatgtatatcttattttctctctttgttcagggctcaatgtaattgtag---------------------attgttctctaacttgaatatg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419636 342 + 190429646 atccttattttgaaacaagaatcagctcatgtagttctcctgatcagatctcttctcactttagaataagatgca-ttcttcattttagctttcagacctttatctgatctggctctagattattgtttgacctagt-ttttactattcttctcattggtcattcaattcaatttcaggcaaagtgattttttgctctttttggaatacact--agccttgtgatatcatcagagcctgtacactt-cctcttcttgaaatgttcttccc-caaatttacatatagtttattttctctctttgttcagggctcaatgtaattgtag---------------------atttttctctaccttgattatg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938638 342 + 189454096 atccttattttgaaacaagaatcagctcatgtagttctcctgatcagatctcttctcactttagaataagatgca-ttcttcattttagctttcagacctttatctgatctggctctagattattgtttgacctagt-ttttactattcttctcattggtcattcaattcaatttcaggcaaagtgattttttgctctttttggaatacact--agccttgtgatatcatcagagcctgtacactt-cctcttcttgaaatgttcttccc-caaatttacatatagtttattttctctctttgttcagggctcaatgtaattgtag---------------------atttttctctaccttgattatg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930439 342 - 40319822 atccttattttgaaacaagaatcagctcatgtagttctcctgatcagatctcttctcactttagaataagatgca-ttcttcattttagctttcagacctttatctgatctggctctagattattgtttgacctagt-ttttactattcttctcattggtcattcaattcaatttcaggcaaagtgattttttgctctttttggaatacact--agccttgtgatatcatcagagcctgtacactt-cctcttcttgaaatgttcttccc-caaatttacatatagtttattttctctctttgttcagggctcaatgtaattgtag---------------------atttttctctaccttgattatg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484344 342 - 9219162 atccttattttgaaacaggaatcagctcaagtagttctcctgatcagatctcttcgcactttagaataagatgca-ttcttcattttagctttcagacctttatctgatctggctctagattattgtttgacctagt-ttttactattcttctcattggtcattcaattcaatttcaggcaaagtgattttttgctctttttggaatacact--agccttgtgatatcatcagagcctgtacactt-cctcttcttgaaatgttcttccc-caaatttacatatagtttattttctctctttgttcagggctcaatgtaattgtag---------------------atttttctctaccttgattatg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009248 344 + 135778131 atccttattttgaaacaggaatcagatcatgtagttctcctgagcagatctcttcatactttagaataagatgcatttcttcattttagcttttaaacctttatctgatctggctctagattattgtttgacctcat-tttcattattcttcttattggtcattcaattcaatttcaggaaaagtgattttttgctctttttggaatacact--agccttgtgatatcatcagagcctgtacacttccctcttcttgaaatgttcttccc-caaatttatatatagtttattttctctctttgttcagggctcaatgtaattgtag---------------------atttttctgtaccttgattatg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2779000 342 - 3013352 atgcttattttgaaacaggaatcagctcatgtagttctcctgatcggatctcttcgcactttagaataagatgca-ttcttcattttagctttcagacctttatctgatctggctctagattattgtttgacctagt-ttttactattcttctcattggtcattcaattcaatttcaggcaaagtgattttttgctctttttggaatacact--agccttgtgatatcatcagagcctgtacactt-cctcttcttgaaatgttcttccc-caaatttacatatagtttattttctctctttgttcagggctcaatgtaattgtag---------------------atttttctctaccttgattatg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6007945 342 + 8656713 atccttattttgaatcaggaatcagatcatgtagttctcctgatcagatctcttctcactttagaataagatgcatttcttcattttagctttc-gacctttatctgatctggctctagattattgttcgacctcgt-ttttactattcttctcattggtcattcaattcaatttcaggcaaagtgattttttgccctttttggaatacacc--agccttgtggtatcatcagagcctgtaacttc-cctcttcttgaaatgttcctccc-caaatttacatatagtttattttctctctttgttcagggctcaatgtaattgtag---------------------atttttctctgccttgattatg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129453142 343 - 190850796 atccttattttgaaacagtaatcagatcatatagttctctggataagatctcttcacactttctaataagatgcatttcttcattttagcttttagacctttacctgatctggacctagattattgtttgacctcatctttcactattcttctt-ttgcctattcaattccatttcaggcatagtgactttttcctaattttggaatgcact--agccttttgatttcattagagtctatatacttccctcgtcctgaaatgtttttccc--aaatttatgtgtagcttaatttctctctttgttcagggctcagtgtaattctag---------------------atttttctctaccttgattatg i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6525857 341 - 25294431 attcttactttgaaacggtaatcagaccatatagttctccggatcagatcgcttcacactttcgaataagatgcatttcttcattttagcttttagatctttatctgatctgaacctagattattatttgacctcatctttcactatttttctc-ttgctcattcaattccatttcgggcatagtgactttttccta---tggaaatgcact--agccttttcatttcattagagcctatatacttccctcttcctgaaatgttcttccc-aaaatttatgtatagcttactttttctctttgttcagggcttagtgtaattctag---------------------atttttctctaccttgattatg i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4080291 344 - 6311556 atccttattttgaaacagtaatcagatcatatagttctccggatcagatctcttcacacttttgaataagatgcatttcttcattttagcttttaggcctttatccgatctggacctagattattgtttgacctcatctttcactattcttctc-ttgttcattcaattccatttcaggcatagtgactttttcctatttttggaatgcact--agccttttcatttcattagagcctatatacttccctcttcctgaaatgttcttccc-caaatttatgtatagcttactttctctctttgttcagggctcagtgtaattctag---------------------atttttctctacctcgattatg i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14936180 343 + 15034901 atccttattttgaaacagtaatcagatcatatagttctccggattagatttcttcatgctttcgaataagatgcatttcttcattttagcttttagatctttatctgatctggacctagattattgtttgacctcatctttcactattcctctc-ttgctcattcaattccatttcaggcatagtgac-ttttcctatttttggaatgcact--agccttttcatttcgttagagcctatatacttccctcttcctgaaatgttcttccc-cagatttatgtatagcttactttctctctttgttcggggctctgtgtaattctag---------------------atttttctctaccttgattttg i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 957760 339 - 3201129 atcttcatttggaaaca-caatgagattatgtgaaactcctgatcatatctctt-gtactttaaaataaaatgcatttcttcattac-gctttttaaccgtcttctg----------------ttgtttgacctaac-tgctaccattcttcccattgctcatttaattc-----cagatgtaacgcctttttgctatttctggaaaacacttaagacttttgattttat-agagcgtgtgcgcttcccaatgcctgaaatgttcttcccccaaatttatgtataactgatattctctttttcttcagggttca---taattttaattagaattttacattctaagcatttttct-tatctagattatt i otoGar3.GL873702 I 2527 C 0 e micMur3.chr14 26335073 2485 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44057761 1736 - 53741614 I a score=684482.000000 s hg38.chr9_KI270719v1_random 58893 69 + 176845 tcttacccctcatttgactggttt------tccttcataccaattatttgtattctaaaatattttatatttttc- s panTro5.chr4 135083678 69 + 194502333 tcttacccctcatttgactggttt------tccttcataccaattatttgtattctaaaatattttatatttttc- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64036 69 - 70559 tcttacccctcatttgactggttt------tccttcataccaattatttgtattctaaaatattttatatttttc- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478466 69 - 115148730 tcttacccctcatttgactgattt------tccttcatacctattatttgtattataaaatattttatatttttc- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131419978 69 + 190429646 tcttacccctcatttgactggttt------tccttcataccaattatttgtattctaaaatattttatatatttc- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130938980 69 + 189454096 tcttacccctcatttgactggttt------tccttcataccaattatttgtattctaaaatattttatatatttc- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930781 69 - 40319822 tcttacccctcatttgactggttt------tccttcataccaattatttgtattctaaaatattttatatatttc- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484686 69 - 9219162 tcttacccctcatttgactggttt------tccttcataccaattatttgtattctaaaatattttatatatttc- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009592 69 + 135778131 tcttacccctcatttgactggttt------tccttcataccaattatttgtattctaaaatattttatatatttc- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2779342 65 - 3013352 tcttacccctcatt----tggttt------tccttcataccaattatttgtattctaaaatattttatatatttc- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008287 69 + 8656713 tcttacccctcatttgactggttt------tccttcataccaattatttgtattctaaaatattttatatatttc- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129453485 75 - 190850796 tcttacccctcattggactgatttagaatacaaataaaagcaattatttgtattctaaaatattttatatatttc- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6526198 69 - 25294431 tcttactccgcattggactgatct------tcctttatagcaattatttgtattctaaaatattttatatatttc- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4080635 69 - 6311556 tcttaaccttcattggactgatca------tcctttatagcaattatttgtattataaaatattttatatatttc- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14936523 69 + 15034901 tcttacccctcattggactgatct------tcctttatagcaattatttgtattctaaaatattttatatatttc- i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26337558 70 - 93316391 tcttatccctcatttgactaattt------ttctgcatagcaactattgccattctaaaataattcatatctttta i micMur3.chr14 I 2485 C 0 s otoGar3.GL873702 958099 69 - 3201129 tattaaccttcattcgattaattt------ttctgtatagcagttatgactattctgaaatattttatatatttc- i otoGar3.GL873702 C 0 C 0 e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44057761 1736 - 53741614 I a score=2258526.000000 s hg38.chr9_KI270719v1_random 58962 225 + 176845 cgttgacttgttcactgagttccttcctctaaaatgtagcttcatgagggcagatattttgttaaaattgtatgctactgtatcact-agaactgagaacaatgcctgaacagagtagctac---tcaTGACTCATTGGCTAAAACAAGTTAATGAATGAGAACAGGCAGGTAGAAAGCCAGGAAGGAAAGGAGGCTATTATATTAAGTTGAATGAGGGATTAAATGAA s panTro5.chr4 135083747 225 + 194502333 tgttgacttattcactgagttccttcctctaaaatgtagcttcataagggcagatattttgttaaaattgtatactactgtatcact-agaactgagaacaatgcctgaacagagtagctac---tcaTGACTCATTGGCTAAAATAAGTTAATGAATGAGAACAGGCAGGTAGAAAGCCAGGAAGGAAAGGAGGGTATTATATTAAGTTGAATGAGGGATTAAATGAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64105 225 - 70559 tgttgacttgttcactgagttccttcctctaaaatgtagcttcatgagggcagatattttgttaaaattgtatgctactgtatcact-agaactgagaacaatgcctgaacagagtagctac---tcaTGACTCATTGGCTAAAACAAGTTAATGAATGAGAACAGGCAGGTAGAAAGCCAGGAAGGAAAGGAGGGTATTATATTAAGTTGAATGAGGGATTAAATGAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478535 222 - 115148730 tgttgacttgttca--gagttccttcctctaaaatgtagcttcatgagggcagatattttgttaaaattgtatactactgtatcact-agaactgagaacaatgcctgaacagagtaggtac---tcatcaatcattggctaaaataagttaatgaatGAgaac-ggcaggtagaaagcaaggaaggaaaggaggaTATTATATTAAGTTGAATGAGGGATTAAATGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131420047 225 + 190429646 tgttgacttgtccactgagttccttcgtctaaaatgtagcttcacgagggcagagattttgttataattgtatactactgcatcatt-agaactgacagcaatgcctgaacagagtagttac---tcatgaatcattagctacaataagttaatGAATGAGAACAGACAGGTAAAAAGCCAGGAAGGAAAGGAGGATATGATATTAAATTGAACGAGGGATTAAATGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130939049 225 + 189454096 tgttgacttgtccactgagttccttcctctaaaatgtagcttcacgagggcagagattttgttataattgtatactactgcatcatt-agaactgacagcaatgcctgaacagagtagttac---tcatgaatcattagctaaaataagttaatgaatGAGAACAGGCAGGTAAAAAGCCAGGAAGGAAAGGAGGATATGATATTAAATTGAACGAGGGATTAAATGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34930850 225 - 40319822 tgttgacttgtccactgagttccttcctctaaaatgtagcttcacgagggcagagattttgttataattgtatactactgcatcatt-agaactgacagcaatgcctgaacagagtagttac---tcatgaatcattagctaaaataagttaatgaatGAGAACAGGCAGGTAAAAAGCCAGGAAGGAAAGGAGGATATGATATTAAATTGAACGAGGGATTAAATGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484755 225 - 9219162 tgttgacttgtccactgagttcctccctctaaaatgtagcttcacgagggcagagattttgttataattgtatactactgcatcatt-agaactgagagcaatgcctgaacagagtagttac---tcatgaatcattagctaaaataagttaatgaatGAGAACAGGCAGGTAAAAAGCCAGGAAGGAAAGGAGGATATGATATTAAATTGAACGAGGGATTAAATGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009661 225 + 135778131 tgttgacttgttcactgagttccttcctctaaaatgtagcttcacgagggcagagattttgttataattgtacactactgtatcatt-agaactgagagcaatgcctgcacagagtagttat---tcatgaatcattagctaaaataagttaatgaatGAGAAAAGGCAGGTAAAAAGCCAGGAAGGAAAGGAGGATATGATATTAAATTGAATGAGGGATTAAATGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2779407 225 - 3013352 ggttgacttgtccactgagttcctccctctaaaatgtagcttcacgagggcagagattttgttataattgtatactactgcatcatt-agaactgagagcaatgcctgaacagagtagttac---tcatgaatcattagctaaaataagttaatgaatGAGAACAGGCAGGTAAAAAGCCAGGAAGGAAAGGAGGATATGATATTAAATTGAACGAGGGATTAAATGAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008356 225 + 8656713 tgttgacttgttcactgagttccttcctctaaaatgtagcttcacgagggcagagattttgttataattgcatactactgtatcatt-agaactgagagcaatgcctgaacagagtagttac---tcatgaatcattagctaaaataagttaatgaatGAGAACAGGCAGGTAAAAAGCCAGGAAGAAAAGGAGGATATGATATTAAATTGAATGAGGGATTAAATTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129453560 222 - 190850796 tgttgacttattcactgagttctttcctctaaaatgtagcttcatgagggcagatattttgttaaaattgtaatctactgtgtcact-agacctgaaaacaatgcctgagtagaggagttac---tcattaaacactggcca-aataagttaatGAATGAAAACAGGCAGGTAGGAAGCCAGGAAGGAAAGGAGG--ATTACATTAAGTTGAATGAGGGATTAAATAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6526267 222 - 25294431 tgttgaattgttcactgagttctttcctctaaaacatagcttcgtgagggcagagattttgttaaaattgtaatctactgtgtcact-agaactgaaaacaaagcctgagcagagtagttac---tcattaaacattggcca-aataagataatgaatGAGAAAAGGCAGGTAGGAAGCCAAGAAGGAAAGGAGG--ATTATATTAAGTTTAATGAGAGATTAAATGAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4080704 222 - 6311556 tgttgacttgttcactgagttctttcctctaaaacgtagcttcatgagggcagagattttgttaaaattgtaatatactgtgtcact-agaactgaaaagaaagcctgaacagagtagttac---tcattaaacattggcca-aataagttaatGAATGAGAACAGGCAGGTAGGAAGCCAAGAAGGAAAGGAGA--GTTGCATTAAGTTTAATGAGGGATTAAATGAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14936592 221 + 15034901 tgtttacttgttgactgagttcttttttctaaaacatagcttcatgagggcagagattttgttaaaattgtaatctactctgtcact-agaactgaaaacaaagcctgagtagacca-ttac---tcattaaacattggcca-aataagttaatGAATGAGAATAGGCAGGTAGAAAGCCAAGAAGGAAAGGAGG--ATTACATTAAGTTTAATGAGGGATTAAATGAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26337628 221 - 93316391 gtatgacttatttattgagttctttcctctaaaatgtagcttcatgagggaaaggattttgttaaaattgtatgctaccctatcccc-attactgagagctttgcctgaccagagtagttactaactattaaacactggctc-aataaattaatAAATGAAAATAGGCAGATAGGAAGACAGAAAGGAAGG------ATTATATTAAGTTGAATGAAGTATTAAATGAA i micMur3.chr14 C 0 I 72 s otoGar3.GL873702 958168 206 - 3201129 ttttgactca-atattgagttc-ttcctctaaagtgtagattcacaaggaaagggattttgttaaaattgtatggtactttatccct-agaacggacagaaatgcctgagcaccatagtt-----ctatgaaacactggctc-aataaattaataaatgaaAACAGACAGATAGG--------ATGGGATG------ATTATATAAAGTTGAATGAAGGATTAAATGAA i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44059497 188 - 53741614 CATTTAATTAGTTGCTGAGT-----------Aaatgtcattccatgagggtaagaattttgtcaaagttgtgtattacattatccctcacaactgacagaaatacccaaatagagtagctac---tcatt-------------------------aaTGGGAGCAGAAAGGTAGATAGCCAGGAAGGAAAGAAGA--ATTATATTAAATTGAAAGAAGGGTTAAATGAA i canFam3.chr19 I 1736 C 0 e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=614442.000000 s hg38.chr9_KI270719v1_random 59187 71 + 176845 TATAAATCAGCTGAAAGTAGCATAGGTTATGCAATATGCTTAATAAAGTATGTTTGT--CTATTTTCGTTATG s panTro5.chr4 135083972 71 + 194502333 TATAAATCAGCTGAAAGTAGTATAGGTTATGCAATATGCTTAATAAAGTATGTTTGT--CTATTTTCGTTATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64330 70 - 70559 TATAAATCAGCTGAAAGTAGCATAGGTTATGCAATATGCTTAATAAAGTATGTTTGT--CTATTTT-GTTATG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478757 70 - 115148730 TATAAATCAGCTGAAACTAGCATAGGTTATACAATATGCTTAATAAAGTATG-TTGT--TTATTTTCATTATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131420272 71 + 190429646 GATAAATCTGCAGAAACTAGCATAGGTCATGCAACATGCTTAATAAAGTATGTTTGT--CTCTTTTTGTTATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130939274 71 + 189454096 GATAAATCTGCAGAAACTAGCATAGGTCATGCAACATGCTTAATAAAGTATGTTTGT--CTCTTTTTGTTATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34931075 71 - 40319822 GATAAATCTGCAGAAACTAGCATAGGTCATGCAACATGCTTAATAAAGTATGTTTGT--CTCTTTTTGTTATG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4484980 71 - 9219162 GATAAATCTGCAGAAACTAGCATAGGTCATGCAACATGCTTAATAAAGTATGTTTGT--CTCTTTTTGTTATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009886 71 + 135778131 GATAAATCTGCAGAAACTAGCATAGATCATGCAACATGCTTAATAAAGTATGTTTGT--CTCTTTTTGTTATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2779632 71 - 3013352 GATAAATCTGCAGAAACTAGCATAGGTCATGTAACATGCTTAATAAAGTATGTTTGT--CTCTTTTTGTTATG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008581 71 + 8656713 TATAAATCTGCAGAAACTAGCGTAGGTCATGCAACATGCTTAATAAAATATGTTTGT--CTCTTTTTGTTATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129453782 71 - 190850796 AATAAATTAGCTGAAACTAGCATATGTCATGTAATATGCTTAATAAAGCATGTTTGT--CTATTTTTGCAATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6526489 71 - 25294431 AATAAATTAGCTGAAACTAGCATAGGTCATGTAATATGCTTAATAAAGCATGTTTGT--CTATTTTTGTGATG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4080926 71 - 6311556 AATAAATTAGCTGAAACTAGCATAGGTCATGTAATATGCTTAATAAAGCATGTTTGT--CTATTTTTGTGATG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14936813 71 + 15034901 AATAAATTAGCTGAAACTAGCATAGGTCATGTAATATGCTTAATAAAGCATGTTTGT--CTGTTTTTGTGATG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 958375 72 - 3201129 AATAATTATCTGAAAGTTAGGATAGATTATTTAATATGCTTAATCAAGTATATCTACTGCTACAATAGTGAT- i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44059685 71 - 53741614 GGAAGATTATCCAAAACTACGATAGGCTATATAACATGTCTAATGAAGCACATCTAT--TAATAGCCATTATA i canFam3.chr19 C 0 I 4 e micMur3.chr14 26337849 72 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=316369.000000 s hg38.chr9_KI270719v1_random 59258 29 + 176845 TAATCCAAAACCTGGCCAACCACAAAAC-T---- s panTro5.chr4 135084043 29 + 194502333 TAATCCAAAACCTGGCCAACCACAAAAC-T---- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64400 29 - 70559 TAATCCAAAACCTGGCCAACCACAAAAC-T---- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478827 29 - 115148730 TAATCCAAAACCTGGCCAACCCCAAAAC-T---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131420343 29 + 190429646 TAATCCAAAACCTGGTCAACCATAAAAT-T---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130939345 29 + 189454096 TAATCCAAAACCTGGTCAACCATAAAAT-T---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34931146 29 - 40319822 TAATCCAAAACCTGGTCAACCATAAAAT-T---- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4485051 29 - 9219162 TAATCCAAAACCTGGTCAACCATAAAAT-T---- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009957 29 + 135778131 TAATCTAAAATCTGGTCAACCATAAAAC-T---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2779703 29 - 3013352 TAATCCAAAACCTGGTCAACCATAAAAT-T---- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008652 29 + 8656713 TAATCTAAAACCTGGTCAGCCATAAAAC-T---- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129453853 29 - 190850796 TAATCCAAAACCTGGCCAACCACAAAAC-T---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6526560 29 - 25294431 TAATCCAAAACCTGGCCAACCACAAAAC-T---- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4080997 30 - 6311556 TAATCCAAAACCTGGCCAATCACAAAACTT---- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14936884 29 + 15034901 TAATCCAAAACTTGGCCAACCACAAAAC-T---- i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26337921 29 - 93316391 TAATCCAAAATCTGGCCAACCACAAAAC-T---- i micMur3.chr14 I 72 I 561 s otoGar3.GL873702 958447 28 - 3201129 -AATCCAAACTGGGACCAACCACAAAGT-C---- i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 44059760 32 - 53741614 TAATCCAAAAT-TGGCCAAACACAAAAG-CCACT i canFam3.chr19 I 4 C 0 e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=1305209.000000 s hg38.chr9_KI270719v1_random 59287 154 + 176845 T----TTTACTGACTTTCTCTTTCTTCCCTGTTTAGTGCAGCATAAAATTAGTTATTGATTT-TATCTCTTAACGCTCCGCCTCTATTAGTGAAAGGAT-----CTTCTCTT-ATCATATTTCCAGTC-CAAAGTTC-AGTGGAAACTTTTTACACTCTTACAGTCT s panTro5.chr4 135084072 158 + 194502333 TGTTTTTTACTCACTTTCTCTTTCTTCCCTGTTTAGTGCAGCATAAAATTAGTTATTGATTT-TATCTCTTAACGCTCTGCCTCTATTAGTGAAAGGAT-----CTTCTCTT-ATCATATTTCCAGTC-CAAAGTTC-AGTGGAAACTTTTTACCCTCTTACAGTCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64429 157 - 70559 TGCTTTTTACTCACTTTCTCTTTCTTCCCTGTTTAGTGCAGCATAAAATTAGTTATTGATTT-TATCTCTTAA-GCTCCGCCTCTATTAGTGAAAGGAT-----CTTCTCTT-ATCATATTTCCAGTC-CAAAGTTC-AGTGGAAACTTTTTACACTCTTACAGTCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90478856 157 - 115148730 TGCTTTTTACTCACTTTCTCTTTCTTCCCTGTTTAGTGCAGCATAAAATTAGTTATTGATTT-TATCTCTTAC-GCTCTGCCTCTATTAGTGAAAGAAT-----CTTTTCTT-ATCATATTTCCAGTC-CAAAGTTC-AGTGGAAACTTTTTACACTCTTACAGTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131420372 156 + 190429646 TGCTTTTTACTCACTTTCTCTTCCTTCCCAGTTTAGTGCAGCATAAAATTAGTTATTGATTT-TATTTCTTAT-GCTCTGCCTCTATTAGTGAAAGAAT-----CTTCTGTT-ATCATATTTCC-GTC-CAAAGTTC-AGTAGAAACTTTTTACACTCTTACAGTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130939374 156 + 189454096 TGCTTTTTACTCACTTTCTCTTCCTTCCCAGTTTAGTGCAGCATAAAATTAGTTATTGATTT-TATCTCTTAT-GCTCTGCCTCTATTAGTGAAAGAAT-----CTTCTGTT-ATCATATTTCC-GTC-CAAAGTTC-AGTAGAAACTTTTTACACTCTTACAGTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34931175 156 - 40319822 TGCTTTTTACTCACTTTCTCTTCCTTCCCAGTTTAGTGCAGCATAAAATTAGTTATTGATTT-TATCTCTTAT-GCTCTGCCTCTATTAGTGAAAGAAT-----CTTCTGTT-ATCATATTTCC-GTC-CAAAGTTC-AGTAGAAACTTTTTACACTCTTACAGTCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4485080 156 - 9219162 TGCTTTTTACTCACTTTCTCTTCCTTCCCAGTTTAGTGCAGCATAAAATTAGTTATTGATTT-TATCTCTTAT-GCTCTGCCTCTATTAGTGAAAGAAT-----CTTCTCTT-ATCATATTTCC-GTC-CAAAGTTC-AGTAGAAACTTTTTACACTCTTACAGTCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79009986 153 + 135778131 TGCTTTTTACCCACTTTCTCTTTCTTCCCAGTTTAGTGCAGCATAAAA----TTATTGATTT-TATCTCTTAT-GCTCTGCCTCTATTAGTGAAAGAAT-----CTTCTCTT-ATCATATTTCCAGCC-CAAAGTTC-AGTAGAAACTTTTTACACTCTTACAGTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2779732 156 - 3013352 TGCTTTTTACTCACTTTCTCTTCCTTCCCAGTTTAGTGCAGCATAAAATTAGTTATGGATTT-TATCTCTTAT-GCTCTGCCTCTATTAGTGAAAGAAT-----CTTCTCTT-ATCATATTTCC-GTC-CAAAGTTC-AGTAGAAACTTTTTACACTCTTACAGTCT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008681 156 + 8656713 TGCTTTTTACTCACTTTCTCTTTCTTCCCAGTTTAGTGCAGCATAAAATTAGTTATTGATTT-T-CATCTTAT-GCTCTGCCTCTATTAGTGAAAGAAT-----CTTCTCTT-ATCATATTTCCAGTT-CAAAGTTC-AGTAGAAACTTTTTACACTTTTACAGTCT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129453882 150 - 190850796 TGCTTTTTACTTACATT------CTTCTCAGTTTAATGTAGCATAAAATTAGTTATGGATTTGTATCTCTTAC-ACTCTGCCTCTGTTAGTGAAAGGAT-----CTTCTCTTTATCCTATTTCCAGTC-CAAA---T-AGCAGAAATATTTGATACTCCTATAGttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6526589 149 - 25294431 TTCTTTTTACTTA----------CCTCTCAGTTTAGTGCAGCATAAAATTAGTTGTGGATTTATATCTCTTAC-ACTCTGCCTCTATTAGTAAAAGGGT-----CTTCTATTTATCATATTTTCAGTC-CAAAGTTC-AGCGGAAACGTTTTACACTCCTATAGTCC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4081027 149 - 6311556 TGCTTTTTACTTA----------CTTCTCAGTTTAGTGCAGCATAAAATTAGTTATGGATTTGTATCTCTTAC-ACTCTGCCTCTATTAGTAAAAGGGT-----CTTCTATTTATCATATTTCCAGTC-CAAAGTTC-AGCAGAAACCTTTTACACTCCTGTAGTCT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14936913 152 + 15034901 TGCTGTTTACTTACTTT------CTTCTCAGTTTGATGCAGCAT-AAATTAGTTATGGATTTGTATCTCTTAC-ACTTTGTCTCTGTTAGTGAAAGGAT-----CTTCTCTTCATCCTATTTCCAGTC-CAAAGTTC-AACGGAAATGTTTTACACTCCTATAGTTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 958478 156 - 3201129 ----TTCTATTCATTTTCTTTTTCTTCTCAATTTAGTGTGATGTAAAATTAGTCAGTGGCCTGTATATCTTAT-TCTCTGCCTCTATTGCTGGGAGAAC-----ATTTTCTTTATCACATACCCATCC-AGAAGTCCAAAGGGAAACTCTTTTTATCATCAAAATAT i otoGar3.GL873702 I 3 C 0 s canFam3.chr19 44059792 158 - 53741614 ----TTTCATTCATTTTCTCTGAC-TCTCAAGTTAGTACAATGTAAAATTAGTCAGTAGCTTGGATCTCTT-T-GCTCTGCCTCTAGTAGTGGGTGGACAAGCGCGCTTTCT-ATCATAATTCCACTCTCCAAGGCC-AATGGGAACTTTTTACACATTTAAGGTCT i canFam3.chr19 C 0 I 28 e micMur3.chr14 26337950 561 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=30930.000000 s hg38.chr9_KI270719v1_random 59441 3 + 176845 ATT s panTro5.chr4 135084230 3 + 194502333 ATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64586 3 - 70559 ATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90479013 3 - 115148730 ATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131420528 3 + 190429646 ATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130939530 3 + 189454096 ATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34931331 3 - 40319822 ATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4485236 3 - 9219162 ATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79010139 3 + 135778131 ATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2779888 3 - 3013352 ATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008837 3 + 8656713 ATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129454032 3 - 190850796 att i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6526738 3 - 25294431 ATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4081176 3 - 6311556 ATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14937065 3 + 15034901 ATT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 958634 3 - 3201129 GTT i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26337950 561 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44059950 28 - 53741614 I a score=850137.000000 s hg38.chr9_KI270719v1_random 59444 108 + 176845 Tgaaatccttatatcataaacataccagcac-----------------------------tt-----atcacagcactattcacagtagcaaagatactgaatcaacctaagtgtccaccaatagatgatttgataaagaaa s panTro5.chr4 135084233 108 + 194502333 Tgaaatccttatatcataaacataccagcac-----------------------------tt-----atcacagcactattcacagtagcaaagatactgaatcaacctgagtgtccaccaatagatgatttgataaagaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64589 108 - 70559 Tgaaatccttatatcataaacataccagcac-----------------------------tt-----atcacagcactattcacagtagcaaagatactgaatcaacctaagtgtccaccaatagatgatttgataaagaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90479016 105 - 115148730 Tgaaatccttatatcataaacataccagc--------------------------------c-----atcacagcactattcacagtagcaaagatactgaatcaacctaagtgtccaccaatagatgatttgatagagaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131420531 112 + 190429646 Tgaaatccttatataataaacataccagaac----ttg---------------------ttt-----atcacagtactattcacagtagtaaagacactgaatcaacctaagtgtccaccaatagatgatttgatgaagaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130939533 112 + 189454096 Tgaaatccttatataataaacataccagaac----ttg---------------------ttt-----atcacagtactattcacagtagtaaagacactgaatcaacctaagtgtccaccaatagatgatttgatgaagaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34931334 112 - 40319822 Tgaaatccttatataataaacataccagaac----ttg---------------------ttt-----atcacagtactattcacagtagtaaagacactgaatcaacctaagtgtccaccaatagatgatttgatgaagaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4485239 112 - 9219162 Tgaaatccttatataataaacataccagaac----ttg---------------------ttt-----atcacagtactattcacagtagcaaagacactgaatcaacctaagtgtccaccaatagatgatttgatgaagaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79010142 112 + 135778131 Tgaaatccttgtataataaacataccagaac----ttg---------------------ttt-----atcacagtactatttacagtagcaaagatactgaatcaacctaagtgtctgccaatagatgatttgatgaagaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2779891 112 - 3013352 Tgaaatccttatataataaacataccagaac----ttg---------------------ttt-----atcacagtgctattcacagtagcaaagacattgaatcaacctaagtgtccaccaatagatgatttgatgaagaaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008840 112 + 8656713 Tgaaatccttatataataaacataccagaac----ttg---------------------ttt-----atcacagtactattcacagtagtaaagacactgaatcaacctaagtgtccaccaatagatgatttgatgaagaaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129454035 142 - 190850796 ttaaatatttatattGTAAACATACTAGCacttatttgatacacaaataagtgctggtatgtttataataaaagaactattcatagtaggaaagatcctaaatcaacctaagtgtccaccaatatatgatctgataaagaaa i calJac3.chr3 C 0 I 1595 s saiBol1.JH378129 6526741 116 - 25294431 TTaaatccttatattaaaggcataccagcacttatttg---------------------tgt-----atcacagaactattcacagtaggaaagatattgaatcaacctaagtgtccaccaatatatgatttgataaagaaa i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4081179 116 - 6311556 TTaaatctttatattataaacataccagcacttatttg---------------------tgt-----atcacagaactattcacagtaggaaagatactgaatcaacctaagtctccaccaatatatgatttgataaagaaa i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14937068 116 + 15034901 TTaaatccttatattataaacataccagcacttatttg---------------------tgt-----gtcacagaactattcacagtaggaaagatcctaaatcaacctaagtgtccaccaatatatgatctgataaagaaa i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26337950 561 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44059950 28 - 53741614 I e otoGar3.GL873702 958637 0 - 3201129 C a score=23959.000000 s hg38.chr9_KI270719v1_random 59552 3 + 176845 atg s panTro5.chr4 135084341 3 + 194502333 atg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64697 3 - 70559 atg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90479121 3 - 115148730 ata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131420643 3 + 190429646 atg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130939645 3 + 189454096 atg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34931446 3 - 40319822 atg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4485351 3 - 9219162 atg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79010254 3 + 135778131 atg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2780003 3 - 3013352 atg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008952 3 + 8656713 atg i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6526857 3 - 25294431 atg i saiBol1.JH378129 C 0 I 687 s cebCap1.NW_016107420v1 4081295 3 - 6311556 atg i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14937184 3 + 15034901 atg i aotNan1.NW_018507635v1 C 0 I 1613 e micMur3.chr14 26337950 561 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44059950 28 - 53741614 I e otoGar3.GL873702 958637 0 - 3201129 C e calJac3.chr3 129454177 1595 - 190850796 I a score=12606.000000 s hg38.chr9_KI270719v1_random 59555 2 + 176845 tg s panTro5.chr4 135084344 2 + 194502333 tg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64700 2 - 70559 tg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90479124 2 - 115148730 tg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131420646 2 + 190429646 tg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130939648 2 + 189454096 tg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34931449 2 - 40319822 tg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4485354 2 - 9219162 tg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79010257 2 + 135778131 tg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2780006 2 - 3013352 tg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008955 2 + 8656713 tg i colAng1.NW_012114544v1 C 0 C 0 s cebCap1.NW_016107420v1 4081298 2 - 6311556 tg i cebCap1.NW_016107420v1 C 0 I 957 e micMur3.chr14 26337950 561 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44059950 28 - 53741614 I e otoGar3.GL873702 958637 0 - 3201129 C e aotNan1.NW_018507635v1 14937187 1613 + 15034901 I e saiBol1.JH378129 6526860 687 - 25294431 I e calJac3.chr3 129454177 1595 - 190850796 I a score=5183642.000000 s hg38.chr9_KI270719v1_random 59557 1111 + 176845 agatggtaccatctcactccagttagaatggagatcactaaaaagtcagaaaacaacagatactggagagaatgtggagcaataggcatgcttttacactgttggtgggagtgtaaattagtttaaccattgtggaagacagtgtggcgattcttcagggatctagaactagaaatacattttgacccagcaatcccattactgggtatatacccaaaggattataaatcatcctactctgaagacacatgcacacatatgtttattgcagcactgttcacaatagcaaagacttggaaccaacccaaatgcccaccaatgatagactggataaagaaaatgtggcacatatacatcatggaatactatgcagccataaaaaatgatgagttcatgtcctttgcagggacatgaatgaaattggcaaacatcattctcagcaagctaacacaagaacagaaaaccaaacactgcatgctctcactcataagtgggagttgaacaatgagaatacatggacacaaggaggggaacatcacactccacagcctgtcagagggtgaggggctaggggagggatagcatttagagaaagacttaatgtagatgacaggttgatgagtgcagcaaaccactatggcacgtgtatacctacataacaaacctgcaagttctgcacatgtaccccagaacttaaagtataataaaaaagatttccacct---aaagataagaaaatatgatgatatacacaatggaatacaattcagcctttaaaaataatatacttatgaaa--catgtattttggagcagtttggatggaactggaggacattatcttagatgaaagtcagacacagaaagacagatactgcgtgttctcatttataaatgggaggtaattaatatgttcacatggacatagagtgtgcaatgatagagacttggacatgaagacttggaagagttgggggagagtgagaggggagtaaatgataagaaattatttaatgagtacaaggtatgcttttcaggtgatgaatatgctgaacatcctgacttcactatgcaacctatggatgtaacaaaattacagttgcactccataaattta s panTro5.chr4 135084346 1111 + 194502333 agatggtaccatctcactccagttagaatggcgatcattaaaaagtcagaaaacaacagatactggagagaatgtggagaaataggaatgcttttacactgttggtgggagtgtaaattagtttaaccattgtggaagacagtgtggcgattcttcagggatctagaactagaaataccttttgacccagaaatcccattactgggtatatacccaaaggattataaatcatcctactctgaagacacatgcacacatatgtttattgcagcactgttcacaatagcaaagacttggaaccaactcaaatgcccaccaatgatagactggataaagaaaatgtggcacatatacatcatggaatactatgcagccataaaaaatgatgagttcatgtcctttgcagggacatgaatgaaattggcaaacatcattctcagcaagctaacacaagaacagaaaaccaaacactgcatgctctcactcataagtgggagttgaacaatgagaatacatggacacaaggaggggaacatcacactccacagcctgtcagagggtgaggggctaggggagggatagcatttagagaaagacctaatgtagatgacaggttgatgagtgcagcaaaccactatggcacgtgtatacctacataacaaacctgcaagttctgcacatgtaccccagaacttaaagtataataaaaaagatttctgcct---aaaaataagaaaatatgacgatatacacaatggaatacaattcagcctttaaaaataatatactcatgaaa--catgtattttggagcagtttggatggaactggaggacattatcttagatgaaggtcagacacagaaagacagatactgcgtgttctcatttataaatgggaggtaattaatgcgttcacatggacatagagtgtgcaatgatagagacttggacatgaagacttggaacggttgtgggagagtgagaggcgagtaaatgataagaaattacttaatgagtacaaggtatgcttttcaggtgatgaatatgctgaacgtcctgacttcactatgcaacctatggatgtaacaaaattacaattgcactccataaattta i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 64702 1108 - 70559 agatggtaccatctcactccagttagaatggagatcactaaaaagtcagaaaacaacagatactggagagaatgtggagcaataggaatgcttttacactgttggtgggagtgtaaattagtttaaccattgtggaagacagtgtggcgattcttcagggatctagaactagaaatac-ttttgacccagcaatcccattactgggtatatacccaaaggattataaatcatcctactctgaagacacatgcacacatatgtttattgcagcactgttcacaatagcaaagacttggaaccaacccaaatgcccaccaatgatagactggataaagaaaatgtggcacatatacatcatggaatactatgcagccataaaaaatgatgagttcatgtcctttgcagggacatgaatgaaattggcaaacatcattctcagcaagctaacacaagaacagaaaaccaaacactgcatgctctcactcataagtgggagttgaacaatgagaatacatggacacaaggaggggaacatcacactccacagcctgtcagagggtgaggggctaggggagggatagcatttagagaaagacctaatgtagatgacaggttgatgagtgcagcaaaccactatggcacgtgtatacctacataacaaacctgcaagttctgcacatgta-cccagaacttaaagtataataaaaaagatttccacct---aaagataagaaaatatgatgatatacacaatggaatacaattcagcctttaaaaataatatactcatgaaa--catgtattttggagcagtttggatggaactggaggacattatcttagatgaaagtcagacacagaaagacagatactgcgtgttctcatttataaatgggaggtaattaatgcattcacatggacatagagtgtgcaatgatagagacttggacatgaagacttggaagagttgggggagagtgagaggggagtaaatgataagaaattacttaatgagtacaaggtatgcttttcaggtgatgaatatgctgaac-tcctgacttcactatgcaacctatggatgtaacaaaattacagttgcactccataaattta i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90479126 1097 - 115148730 agatggtaccatctcactccagttagaatggcgatcattaaaaaatcagaaaacaacagatactgcagagaatgtggagcaataggaatgcttttacactgttggtgggagtgtaaattagtttaaccattgtggaagacagtgtggtgattcttcaaggatctagaactagaaataccttttgacccagcaatcccattactgggtgtatacccaaaggattataaatcatcctactctgaagacacatgcacacatatgtttattgccacactgctcacaatagcaaagacttggaaccaacccaaatgcccagcaatgatagactggataaaggaaatgtggcacatatacatcatggaatactatgcagccataaaaaatgatgacttcatgtcctttgcagggacatgaatgaagttggaaaacatcattctcagcaagctaacacaagaacagaaaatcaaacactgcatgctctcactcataagtgggagttgaacaatgagaatacatggacacaagaaggggaacatcacactccacagcctgtcagagggtgaggggct-ggggagggatagcattaagagaaagacctaatgtagatgacaggttgatgagtgcagcaaaccactatggcacatgt-------------aaacccgcaagttctgcacatgtactacagaccttaaagtataataaaaaagatttccgcct---aaaaaaaagaaaatatgatgatatacacaatggaatacacttcagcctttaaaaataatatactcatgaaa--catgtattttggagcagtttggatggaactggaggacattatcttagatgaaactcagacacagaaagacagatactgcatgttctcatttataaatgggaggtaattaatgcattcacatggacatagattgtgcaatgatagagacttggatatgaagacttggaagggttgggggagagtgagagagaagtaagtgatgagaaattactcaatgagtataaggtatgcttttcaggtgaagaatacactgagcatcctgacttcactatgcaacctatggatgtaacaaaattaaaattgcactccataaattta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131420648 1112 + 190429646 agatggtaccatctcactccagttagaatggcgatcattaaaaaatcaggaaacaacagatactggagaggatgtggagcaacaggaatacttttacactgttggtgggagtgtaaattagtttaatcattgtggaagacagtgtggcgattcttcaaggatctagaactagaaatatcatttgacccagcaatcccattactgggtatatacccaaaggattataaatcttcctactataaagacacgtgcacacatatatttattgaagcactgttcacaatagcaaagacttggaaccaacccaaatgcccaccaatgatagactggataaagaaaatggagcacatatacatcatggaacactatgcagccatagaaaaggatgagttcatgtcctttgcagggacatgaatgaaagtggaaaccatcattctcagcaagctagcacaagaacagaaaaccaaacactgcatgttcgcactcataagtgggaactgaacaatgagaataaatgaac---acaagtggaacatcacacaccgtgg-ctgttggagggtgggggactaggggagggatagcatcaggagaaagacccaatgtagatgacaggttgatgggtgcagcaaaccactatggcatgtgtatacctatgtaacaaacctgcacgttctgcacatgtaccccagaacttaaagtataatgaaaaatatttctgtctaaaaaaaaaaagaaaatacaacgatatacacaatggaatacacttcagcctttaaaaataatatactcatgaaactcatgtattttggggcaatttggatggaactggaggacattatcttagatgaaactcagacacagaaagacagatactgcgtgttctcatttataaatgggagataattaatgtgttcacattgacatagagtgtggaatgatagagacttggacatgaagacttggaagggtttggggagagtgagaagggagtaaatgataagaaattacttaatgagtacaaggtatgcttttcaggtgatgaatacgctgaacatcctgacttcactatgcaacctatggatgtaacaaaattacaattacactccataaattta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130939650 1115 + 189454096 agatggtaccatctcactccagttagaatggcgatcattaaaaaatcaggaaacaacagatactggagaggatgtggagcaacaggaatacttttacactgttggtgggagtgtaaattagtttaatcattgtggaagacagtgtggcgattcttcaaggatctagaactagaaatatcatttgacccagcaatcccattactgggtatatacccaaaggattataaatcttcctactataaagacacgtgcacacatatatttattgaagcactgttcacaatagcaaagacttggaaccaacccaaatgcccaccaatgatagactggataaagaaaatggagcacatatacatcatggaacactatgcagccatagaaaaggatgagttcatgtcctttgcagggacatgaatgaaagtggaaaccatcattctcagcaagctagcacaagaacagaaaaccaaacactgcatgttcgcactcataagtgggaactgaacaatgagaataaatgaacacaacaagtggaacatcacacaccgtgg-ctgttggagggtgggggactaggggagggatagcatcaggagaaagacccaatgtagatgacaggttgatgggtgcagcaaaccactatggcatgtgtatacctatgtaacaaacctgcacgttctgcacatgtaccccagaacttaaagtataatgaaaaatatttctgtctaaaaaaaaaaagaaaatacaacgatatacacaatggaatacacttcagcctttaaaaataatatactcatgaaactcatgtattttggggcaatttggatggaactggaggacattatcttagatgaaactcagacacagaaagacagatactgcgtgttctcatttataaatgggagataattaatgtgttcacattgacatagagtgtggaatgatagagacttggacatgaagacttggaagggtttggggagagtgagaagggagtaaatgataagaaattacttaatgagtacaaggtatgcttttcaggtgatgaatacgctgaacatcctgacttcactatgcaacctatggatgtaacaaaattacaattacactccataaattta i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34931451 1115 - 40319822 AGATggtaccatctcactccagttagaatggcgatcattaaaaaatcaggaaacaacagatactggagaggatgtggagcaacaggaatactttcacactgttggtgggagtgtaaattagtttaatcattgtggaagacagtgtggcgattcttcaaggatctagaactagaaatatcatttgacccagcaatcccattactgggtatatacccaaaggattataaatcttcctactataaagacacgtgcacacatatatttattgaagcactgttcacaatagcaaagacttggaaccaacccaaatgcccaccaatgatagactggataaagaaaatggagcacatatacatcatggaacactatgcagccatagaaaaggatgagttcatgtcctttgcagggacatgaatgaaagtggaaaccatcattctcaggaagctagcacaagaacagaaaaccaaacactgcatgttcgcactcataagtgggaactgaacaatgagaataaatgaacacaacaagtggaacatcacacaccgtgg-ctcttggagggtgggggactaggggagggatagcatcaggagaaagacccaatgtagatgacaggttgatgggtgcagcaaaccactatggcatgtgtatacctatgtaacaaacctgcacgttctgcacatgtaccccagaacttaaagtataatgaaaaatatttctgtctaaaaaaaaaaagaaaatacaacgatatacacaatggaatacacttcagcctttaaaaataatatactcatgaaactcatgtattttggggcaatttggatggaactggaggacattatcttagatgaaactcagacacagaaagacagatactgcgtgttctcatttataaatgggagataattaatgtgttcacattgacatagagtgtggaatgatagagacttggacatgaagacttggaagggtttggggagagtgagaagggagtaaatgataagaaattacttaatgagtacaaggtatgcttttcaggtgatgaatacgctgaacatcctgacttcactatgcaacctatggatgtaacaaaattacaattacactccataaattta i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4485356 1114 - 9219162 agatggtaccatctcactccagttagaatggcgatcattaaaaaatcaggaaacaacagatactggagaggatgtggagcaacaggaatacttttacactgttggtgggagtgtaaattagtttaatcgttgtggaagacagtgtggcgattcttcaaggatctagaactagaaatatcatttgacccagcaatcccattactgggtatatacccaaaggattataaatcatcctactataaagacacgtgcacacatatatttattgaagcactgttcacaatagcaaagacttggaaccaacccaaatgcccaccaatgatagactggataaagaaaatagagcacatatacatcatggaatactatgcagccatagaaaaggatgagttcatgtcctttgcagggacatgaatgaaagtggaaaccatcattctcagcaagctagcacaagaacagaaaaccaaacactgcatgttcgcactcataagtgggaattgaacaatgagaataaatgaacacaacaagtggaacatcacacaccgtgg-ctgttggagggtgggggactaggggagggatagcatcaggagaaagacccaatgtagatgacaggttgatgggtgcagcaaatcactatggcatgtgtatacctatgtaacaaacctgcacgttctgcacatgtaccccagaacttaaagtataatgaaaaatatttctatct-aaaaaaaaaagaaaatacaacgatatacacaatggaatacacttcagcctttaaaaataatatactcatgaaactcatgtattttggggcaatttggatggaactggaggacattatcttagatgaaactcagacacagaaagacagatactgcgtgttctcatttataaatgggagataattaatgtgttcacattgacatagagtgtggaatgatagagacttggacatgaagacttggaagggtttggggagagtgagaggggagtaaatgataagaaattacttaatgagtacaaggtatgcttttcaggtgatgaatacgctgaacatcctgacttcactatgcaacctatggatgtaacaaaattataattacacttcataaattta i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79010259 1107 + 135778131 agatggtaccatctcactccagttagaatggcgatcattaaaaagttaggaaacaacagatactggagaagatgtggagcaacaggaatgcttttacattattggtgggagtgtaaattagtttaatcattgtggaagacagtgtggtgattcttcaaggatctagaactagaaatatcatttgacccagcaatcccattactgagtatatacccaaaagtttataaatcatcctactataaagacacgtgcacacatatatttattgaagcactgttcacaatagcaaagacttggaaccaacccaaatgcccaccagtgatagactggataaagaaaatggaccacatatacatcatggaatactatgcagccatagaaaaggatgagttcatgtccttt-cagggacatgaatgaagctggaaaccatcattctcagcaagctaacacaagaacagaaaaccaaacactgcatgttctcactcataaatgggaattgaacaatgagaataaatgaac---acaagcggaacatcacacaccttgg-ctgttggagggtgggggactaggggagggatagcatcaggagaaagacccaatgtagatgacaggtcgatgggtgcagcaaaccactatggcatgtgtatacctatgtaacaaatctgcacattctgcccatgtaccccagaacttaaagtataatgaaaaatatttctgtct----aaaaaaagaaaatacaatgatatacacaatggaatacacttcagtctttaaaaataatgtactcatgaaactcatgtattttggggcaatttggatggaactggaggacattatctcagatgaaactcagacacagaaagaaagatactgcatgttctcatttataaatgggagataattaatgcgttcacatggacatagagtgtggaatgatagagacttggacatgaagacttggaagggtttggggagagtgagaggggagtaaatgataagaaattacttaatgagtacaaggtatgcttttcaggtgatgaatacgctgaatgtcctgacttcactatgcaacctacggatgtaacaaaattacaattgcactccataaattta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2780008 1114 - 3013352 AGATggtaccatctcactccagttagaatggcgatcattaaaaaatcaggaaacaacagatactggagaggatgtggagcaacaggaatacttttacactgttggtgggagtgtaaattagtttaatcgttgtggaagacagtgtggcgattcttcaaggatctagaactagaaatatcatttgacccagcaatcccattactgggtatatacccaaaggattataaatcatcctactataaagacacgtgcacacatatatttattgaagcactgttcacaatagcaaagacttggaaccaacccaaatgcccaccaatgatagactggataaagaaaatagagcacatatacatcatggaatactatgcagccatagaaaaggatgagttcatgtcctttgcagggacatgaatgaaagtggaaaccatcattctcagcaagctagcacaagaacagaaaaccaaacactgcatgttcgcactcataagtgggaattgaacaatgagaataaatgaacacaacaagtggaacatcacacaccatgg-ctgttggagggtgggggactaggggagggatagcatcaggagaaagacccaatgtagatgacaggttgatgggtgcagcaaatcactatggcatgtgtatacctatgtaacaaacctgcatgttctgcacatgtaccccagaacttaaagtataatgaaaaaTATTTCCATCT-AAAAAAAaaagaaaatacaacgatatacacaatggaatacacttcagcctttaaaaataatatactcatgaaactcatgtattttggggcaatttggatggaactggaggacattatcttagatgaaactcagacacagaaagacagatactgcgtgttctcatttataaatgggagataattaatgtgttcacattgacatagagtgtggaatgatagagacttggacatgaagacttggaagggtttggggagagtgagaggggagtaaatgataagaaattacttaatgagtacaaggtatgcttttcaggtgatgaatacgctgaacatcctgacttcactatgcaacctatggatgtaacaaaattataattacacttcataaattta i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6008957 1111 + 8656713 agatggtaccatctcactccagttagaatggcaatcattaaaaagtcaggaaacaacagatactggagaggatgtggagcaacaggaatgcttttgcactattggtgggagtgtaaattagtttaatcattgtggaagacagtgtggcgattcttcaaggatctagaactagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattctaaatcatcctactctaaagacatgtgcacacatatatttattgaagcactgttcacaatagcaaagacttggaaccaacccaaatgcccacaaatgatagactggaaaaagaaaatggagcacatacacatcatggaatactatgcagccatagaaaaggatgagttcatgtcctttgcagggacatgaatgaagctggaaaccatcattctcagcaagctaacacaagaacagaaaatgaaatactgcatgttctcactcataaatgggaattgaacaatgagagtcaatgaacacaacaagtggagcatcatatgctgtgg-ctgttggagggtggggggctaggggagggatagcatcaggagaaagacccaatgtagatgacaggttgatgggtgcagcaaatcactatggcatgtatatacctatgtaacaaacctgcacgttctgcacatgtaccccagaacttaaagcataatgaaaaatatttctgtct----aaaaataggaaatacaatgatatacacaatggaatacacttcagcctttaaaaataatatactcatgaaactcatgtattttagggcaatttggatggaactggaggacattatcttagatgaaactcagacacagaaagacagatactgtgtgttctcatttataaatgggagataattaatgcgttcacatggacatagagtgtggaatgatagagatttggacatgaagacttcgaagggtttggggagagtgagaggggagtaaatgataagaaattacttaatgagtacaaggtatgcttttcaggtgatgaatatgctgaacgtcctgacttcactatgcaacctacggatgtaacaaaattactattgcactccataaattta i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 26337950 561 - 93316391 I e dasNov3.JH569232 1777788 3290 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44059950 28 - 53741614 I e otoGar3.GL873702 958637 0 - 3201129 C e aotNan1.NW_018507635v1 14937187 1613 + 15034901 I e cebCap1.NW_016107420v1 4081300 957 - 6311556 I e saiBol1.JH378129 6526860 687 - 25294431 I e calJac3.chr3 129454177 1595 - 190850796 I a score=35288.000000 s hg38.chr9_KI270719v1_random 60668 6 + 176845 tagaaa s panTro5.chr4 135085457 6 + 194502333 tagaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 65810 6 - 70559 tagaaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480223 6 - 115148730 tagaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131421760 6 + 190429646 tagaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130940765 6 + 189454096 tagaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932566 6 - 40319822 tagaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486470 6 - 9219162 tagaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011366 6 + 135778131 tagaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781122 6 - 3013352 tagaaa i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010068 6 + 8656713 tagaaa i colAng1.NW_012114544v1 C 0 C 0 s dasNov3.JH569232 1781078 6 + 5974691 TAGAAG i dasNov3.JH569232 I 3290 C 0 e micMur3.chr14 26337950 561 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44059950 28 - 53741614 I e otoGar3.GL873702 958637 0 - 3201129 C e aotNan1.NW_018507635v1 14937187 1613 + 15034901 I e cebCap1.NW_016107420v1 4081300 957 - 6311556 I e saiBol1.JH378129 6526860 687 - 25294431 I e calJac3.chr3 129454177 1595 - 190850796 I a score=35689.000000 s hg38.chr9_KI270719v1_random 60674 8 + 176845 ------taaaaTAA s panTro5.chr4 135085463 8 + 194502333 ------taaaaTAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 65816 8 - 70559 ------taaaaTAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480229 8 - 115148730 ------taaaaTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131421766 8 + 190429646 ------taaaGTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130940771 8 + 189454096 ------taaaGTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932572 8 - 40319822 ------taaaGTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486476 8 - 9219162 ------taaaGTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011372 8 + 135778131 ------taaaGTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781128 8 - 3013352 ------taaaGTAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010074 8 + 8656713 ------taaaGTAA i colAng1.NW_012114544v1 C 0 C 0 s otoGar3.GL873702 958637 8 - 3201129 ------TAAGATAA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1781084 8 + 5974691 TCTTTTTA------ i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26337950 561 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44059950 28 - 53741614 I e aotNan1.NW_018507635v1 14937187 1613 + 15034901 I e cebCap1.NW_016107420v1 4081300 957 - 6311556 I e saiBol1.JH378129 6526860 687 - 25294431 I e calJac3.chr3 129454177 1595 - 190850796 I a score=53007.000000 s hg38.chr9_KI270719v1_random 60682 6 + 176845 AATAAA s panTro5.chr4 135085471 6 + 194502333 AATAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 65824 6 - 70559 AATAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480237 6 - 115148730 AATAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131421774 6 + 190429646 AATAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130940779 6 + 189454096 AATAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932580 6 - 40319822 AATAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486484 6 - 9219162 AATAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011380 6 + 135778131 AATAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781136 6 - 3013352 AATAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010082 6 + 8656713 AATAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129455772 6 - 190850796 AATAGA i calJac3.chr3 I 1595 C 0 s saiBol1.JH378129 6527547 6 - 25294431 AATAGA i saiBol1.JH378129 I 687 C 0 s aotNan1.NW_018507635v1 14938800 6 + 15034901 AATAGA i aotNan1.NW_018507635v1 I 1613 C 0 s otoGar3.GL873702 958645 6 - 3201129 AATGCA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1781092 6 + 5974691 AAAAAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26337950 561 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44059950 28 - 53741614 I e cebCap1.NW_016107420v1 4081300 957 - 6311556 I a score=99248.000000 s hg38.chr9_KI270719v1_random 60688 9 + 176845 TTACATTTT s panTro5.chr4 135085477 9 + 194502333 TTACATTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 65830 9 - 70559 TTACATTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480243 9 - 115148730 TTACATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131421780 9 + 190429646 TTACATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130940785 9 + 189454096 TTACATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932586 9 - 40319822 TTACATTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486490 9 - 9219162 TTACATTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011386 9 + 135778131 TTACATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781142 9 - 3013352 TTACATTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010088 9 + 8656713 TTACATTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129455778 9 - 190850796 TTACATTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6527553 9 - 25294431 TTACATTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082257 9 - 6311556 TTACATTTT i cebCap1.NW_016107420v1 I 957 C 0 s aotNan1.NW_018507635v1 14938806 9 + 15034901 TTACATTTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 958651 9 - 3201129 TTAAACTTT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1781098 9 + 5974691 TTAAACTTG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26337950 561 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44059950 28 - 53741614 I a score=779554.000000 s hg38.chr9_KI270719v1_random 60697 83 + 176845 -AAT-AGAGACACTATCAGAGAAATACACCAAAATGACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--TTTCTCTTCA s panTro5.chr4 135085486 83 + 194502333 -AAT-AGAGACACTATCAGAGAAATACACCAAAATAACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--TTTATCTTCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 65839 83 - 70559 -AAT-AGAGACACTATCAGAGAAATACACCAAAATGACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--TTTCTCTTCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480252 83 - 115148730 -AAT-AGAGACACTATCAGAGAAATACATCAAAATGACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--TTTCTCTTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131421789 83 + 190429646 -AAT-AGAGACACTATCAGAGAAATATACCAAAATGACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--ATTCTCTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130940794 83 + 189454096 -AAT-AGAGACACTATCAGAGAAATATACCAAAATGACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--ATTCTCTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932595 83 - 40319822 -AAT-GGAGACACTATCAGAGAAATATACCAAAATGACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--ATTCTCTTCA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486499 83 - 9219162 -AAT-AGAGACACTATCAGAGAAATATACCAAAATTACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--ATTGTCTTCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011395 83 + 135778131 -AAT-AGAGACACTATCAGAGAAATATACCAAAATGACT---GGACTGAATTGGAAATGA-----AAAAGGTAGAAATCT--CAT--ATTCTCTTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781151 83 - 3013352 -AAT-AGAGACACTATCAGAGAAATATACCAAAATGACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--ATTGTCTTCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010097 83 + 8656713 -AAT-AGAGACACTATCAGAGAAATATACCAAAATGACT---GGACTGAATTGGAAATGG-----AAAAGGTAGAAATCT--CGT--ATTCTCTTCA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129455787 81 - 190850796 -AAT---AGACACTATAATAGAAATAAGCCAAAATGGCT---CCACTAAATTGAAAATGG-----AAAAGGTACAAATCT--CAT--ATTCTCTTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6527562 81 - 25294431 -AAA---AGACACTATAACAGAAATATGCCAAAATGACT---GGACTAAATTGGAAATGG-----AAAAGGTAGAAATAC--CAT--ATTCTTTTCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082266 81 - 6311556 -AAT---AGACACTATAACAGAAATATGCTAAAATGACT---GGACTAAATTGGAAATGG-----AAAAGGTAGAAATAT--CAT--ATTCTCTTCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14938815 81 + 15034901 -GAT---AGACACTATAACAGAAACAAGCCAAAATGTCT---GCACTAAATTGGAAATGG-----AAAAGGTAGAAATCT--CAT--ATTCTCTTCA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 958660 86 - 3201129 -GAAGAAAGAAAATATTCCAGAAATATGCCAACATGATT---TGAGTACATTAGAAATAG-----AAAATATGGCAATCT--CACAAATTTCCTTCA i otoGar3.GL873702 C 0 I 3696 s canFam3.chr19 44059978 93 - 53741614 -AAC-TGAGAAACTTTCACATAGATATACCAATATAAATAGAAGAATAAATGGAAAATAGAAAAAAAAAGGTAAAAATCTCACAT--GTTCTTTTCA i canFam3.chr19 I 28 C 0 s dasNov3.JH569232 1781107 85 + 5974691 AAAT-AGAGAAACCCTCGGTAACATGTAATAAAGTCTGA---AGAGTACATGAAAAATA------AAAAGGTACCTATCTCCCAC--ATTGCTTTAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26337950 561 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=1381169.000000 s hg38.chr9_KI270719v1_random 60780 172 + 176845 GAGACTATTGCAAATT----TGTAT----GTATGT--------AATACACTAATCACA-TCAGATGCCAGTTTTAAGT---ACATA---TTTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTGTTTCA------------------------ATAAGGAAACATTTCA-GAACATACATAATCAATACAAAGCCATTCTCAGTA-ATTTATTTTCA------------TTCCATGCCATGTTAC s panTro5.chr4 135085569 172 + 194502333 GAGACTATTGCGAATT----TGTGT----GTATGT--------AATACACTAATCACA-TCAGATGCCACTTTTAAGT---ACATA---TTTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTCTTTCA------------------------ATACGGAAAAATTTCA-GAACATATGTAATCAATACAAAGCTATTCTCAGTA-ATTTATTTTCA------------TTCCATGCCATGTTAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 65922 172 - 70559 GAGACTATTGCAAATT----TGTAT----GTATGT--------AATACACTAATCACA-TCAGATGCCAGTTTTAAGT---ACATA---TTTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTGTTTCA------------------------ATACGGAAAAATTTCA-GAACATACGTAATCAATACAAAGCCATTCTCAGTA-ATTTATTTTCA------------TTCCATGCCATGTTAC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480335 172 - 115148730 GAGACTATTGCAAATT----CGTAT----GTATGT--------AATACACTAATCACA-TCAGATGCCAGTTTTAAGT---ACATA---TTTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTGTTTCA------------------------ATACGGAAAAATTTCA-GGACATATGTAATCAATACAAAGCCATTCTCAGTA-ATTTATTTTCA------------TTCCATGCCATGTTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131421872 169 + 190429646 GAGACTATTGCAAATT----TGTAA----GTATG-----------TACACTAATCATA-TCAGATGCCAGTTTTAAGT---ACATA---TCTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTCTTTCA------------------------ATGCGGAAAAATTTCA-GAACATATGTAATCAATACAAAGTCATTCCCAGTA-ATTTATTTTCA------------TTCCATGCTATGTTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130940877 169 + 189454096 GAGACTATTGCAAATT----TGTAA----GTATG-----------TACACTAATCATA-TCAGATGCCAGTTTTAAGT---ACATA---TCTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTCTTTCA------------------------ATGCGGAAAAATTTCA-GAACATATGTAATCAATACAAAGTCATTCCCAGTA-ATTTATTTTCA------------TTCCATGCTACGTTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932678 169 - 40319822 GAGACTATTGCAAATT----TGTAA----GTATG-----------TACACTAATCATA-TCAGATGCCAGTTTTAAGT---ACATA---TCTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTCTTTCA------------------------ATGCGGAAAAATTTCA-GAACATATGTAATCAATACAAAGTCATTCCCAGTA-ATTTATTTTCA------------TTCCATGCTACGTTAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486582 169 - 9219162 GAGACTATTGCAAATT----TGTAA----GTATG-----------TACACTAATCATA-TCAGATGCCAGTTTTAAGT---ACATA---TCTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTGTTTCA------------------------ATACGGAAAAATTTCA-GAACATATGTAATCAATACAAAGTCATTCCCAGTA-ATTTATTTTCA------------TTCCATGCTACGTTAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011478 169 + 135778131 GAGACTATTGCAAATT----TGTAA----GTATG-----------TACACTAATCACA-TCAGATGCCAGTTTTAAGT---ACATA---TCTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTGTTTCA------------------------ATACGGAAAAATTTCA-GAACATATGTAATCAATACAAAGTCATTCCCAGTA-ATTTAGTTTCA------------TTCCATGCTACGTTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781234 169 - 3013352 GAGACTATTGCAAATT----TGTAA----GTATG-----------TACACTAATCATA-TCAGATGCCAGTTTTAAGT---ACATA---TCTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTGTTTCA------------------------ATACGGAAAAATTTCA-GAACATATGTAATCAATACAAAGTCATTCCCAGTA-ATTTATTTTCA------------TTCCATGCTACGTTAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010180 169 + 8656713 GAGACTATTGCAAATT----TGTAA----GTATG-----------TACACTAATCACA-TCAGATGCCAGTTTTAAGT---ACATA---TCTTCC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTGTTTCA------------------------GTATGGAAAAATTTCA-GAATATATGTAATCAATACAAAGCCATTCCCAGTA-ATTTATTTTCA------------TTCCATGCTACGTTAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129455868 171 - 190850796 GCAACTATTGCAAATT----TGTCA----GAATGT--------AATACGCTAAGCACA-TCAGATGGTAGTTTTAAAT---GCATCATCTTTTTC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTATATTTGTTTCA------------------------ATACAGTAAAACTTCA-GAACCTATGTAATCAATATAAAG----TCTTGGTA-ATATAGTTTCA------------TTACATGCCATGTTAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6527643 171 - 25294431 GAAACTACTGCAAATT----TCTAA----GTATGT--------AATACACTAATCACA-TCAGATGGCAGTTTTAAGT---ACATCATCTTTTTT--------------TTCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTGTTTCA------------------------ATAAGGAAAAATTTCA-GAATATATGTAATCAACATAAAG----TCTCGGTA-ATATAGTTTCA------------TTACATGCCATGTTAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082347 175 - 6311556 GAAACTACTGCAAATT----TGTAA----GTATTT--------AATACACTAACCACATTCAGATGGCAGTTTTACTTCAAACATAATCTTTTTC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTGGATTTGTTTCA------------------------ATAAGGAAAAATTTCA-GAACATATGTAATCAACATAAAG----TCTCAGTA-ATATAGTTTCA------------TTACATGCCATGTTAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14938896 175 + 15034901 GCAACTATTGCAAATT----TGTAAGTACGTATGT--------AATACACTAATCACG-TCAGATGGCAGTTTTAAAT---ACATCATCTTTCTC--------------TCCA-------------------------------------------------------------------------------------------------CTGTGTAGATTTGTCTCA------------------------ATATGGAAAAATTTCA-GAGCATATGTAATCAATATAAAG----TCTCGGTG-ATATAGTTTCA------------TTACATGCCATGTTAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 962442 279 - 3201129 GAAATTACCGGGCATT----TGTAA----GTATGG--------GATATATTAATCACA-TCAAGTAACAGCTATAAAT---ACATC---TTTTCCTATGATAGCAGCTGTCCA--------------GAATCATCAATCTGTTGCCTAATAATCTTCTCAGCATAATATTCAAAGACAACAATTTGGATAATTGATAATATTTTCATTTTCTGTGTATAGTTGTCCTA------------------------TTATAGAATAATTTTA-AAATATG-GTTATCAATATGAAGGCATTCTCAATA-ATCTATTTTTATTTATTTACGTCTTTAATGCCATTCCT- i otoGar3.GL873702 I 3696 C 0 s canFam3.chr19 44060071 197 - 53741614 -GAAATACAGCAGATTTTTATGTAA----GTATGG--------GATACATTAATCACA-TCAAATAGTAGTTGTAAAT---AGACT---TTTTAC--------------TCAT-------------------------------------------------------------------------------------------------CAGCGTTGTATTGAATCACCTATCAACTGGCTGTTAACCTTCTCAAAGAAACATTTGA-AGACT-------CCAATTT---GCCCTTGTTAAAATATTTAGTTCTATAGACTG-----TTCTATGACAGAATAA i canFam3.chr19 C 0 I 11 s dasNov3.JH569232 1781192 275 + 5974691 GAACATAT---AGATT----TTTAA----GTATATAATTTTGAAATACTGCCATTACA-TTAAATGCCAGTTGTAAGC---ACCCT---TTCTCT--------------TCCATTGGCAGCTGCCCTGAATCACCTCTAATTTGACTATTAACCCTCTCAAAGTAATATTCAAGGACCTCAATTTGCCTTCCTTAAAATACCTTGTTTTTCTGTATAGAATTGTTCCA------------------------TTAGAGAATAATTTCACAAACATATGCAGTCAATATGAATGACTTCCTAATA-ATTTATATTCA------------TTACATGCCATACTAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26337950 561 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=578945.000000 s hg38.chr9_KI270719v1_random 60952 69 + 176845 TTAGGTTTACA-------TTTACTACC----------------------------------------------TT------AGAAAAC-------ATTATGTA-------CAAAAACT------------TTTCTTTCT----------------------------------------TATAGTGA----------------ATTAAAT s panTro5.chr4 135085741 69 + 194502333 TTAGGTTTACA-------TTTACTACC----------------------------------------------TT------AGAAAAC-------ATTATGTG-------CAAAAACT------------TTTCTTTCT----------------------------------------TATAGTGA----------------ATTAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66094 69 - 70559 TTAGGTTTACA-------TTTACTACC----------------------------------------------TT------AGAAAAC-------ATTATGTA-------CAAAAACT------------TTTCTTTCT----------------------------------------TATAGTGA----------------ATTAAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480507 68 - 115148730 TTAGGTTTACA-------TTTACTACC----------------------------------------------TT------AGAAAAC-------ATTATGTA-------CAAAAACT------------TTTCTTTCT----------------------------------------TATAG-GA----------------ATTAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422041 69 + 190429646 TTAGGTTTACA-------TTTACTACT----------------------------------------------TT------AGAAAAT-------ATTCTGTA-------CAAAAACT------------TTTCTTTCT----------------------------------------TATAGTGA----------------ATTAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941046 69 + 189454096 TTAGGTTTACA-------TTTACTACT----------------------------------------------TT------AGAAAAT-------ATTCTGTA-------CAAAAACT------------TTTCTTTCT----------------------------------------TATAGTGA----------------ATTAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932847 69 - 40319822 TTAGGTTTACA-------TTTACTACT----------------------------------------------TT------AGAAAAT-------ATTCTGTA-------CAAAAACT------------TTTCTTTCT----------------------------------------TATAGTGA----------------ATTAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486751 69 - 9219162 TTAGGTTTACA-------TTTGCTACT----------------------------------------------TT------AGAAAAT-------ATTCTGTA-------CAAAAACT------------TTTTTTTCT----------------------------------------TATAGTGA----------------ATTAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011647 69 + 135778131 TTAGGTTTACA-------TTTACTACT----------------------------------------------TC------AGAAAAT-------ATTCTGTA-------CAAAAACT------------TTTCTTTCT----------------------------------------TATAGTGA----------------ATTAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781403 68 - 3013352 TTAGGTTTACA-------TTTGCTACT----------------------------------------------TT------AGAAAAT-------ATTCTGTA-------CAAAAACT------------TTT-TTTCT----------------------------------------TATAGTGA----------------ATTAAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010349 67 + 8656713 TTAGGTTTACA-------TTTACTACT----------------------------------------------TT------AGAAAAT-------ATTCTGTA-------CAAAA--C------------TTTTCTTCT----------------------------------------TATAGTGA----------------ATTAAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456039 69 - 190850796 TTAGGTTTAAA-------TTTACTACT----------------------------------------------TA------CGAAAAC-------ATTATGTA-------CAAAAACC------------TTTCTTTCT----------------------------------------TATAGTGA----------------ATTATAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6527814 63 - 25294431 TTAGGTTTAAA-------TTTACTACT----------------------------------------------TT------AGAAAAC-------ATTATGT-------------ACT------------TTTCTTTCT----------------------------------------TATAGTGA----------------GTTATAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082522 68 - 6311556 TTAGGTTTAAA-------CTTACTACT----------------------------------------------TT------AGAAAAC-------GTTATGTA-------CAAA-ACT------------TTTCTTTCT----------------------------------------TACAGTGA----------------ATTATAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14939071 69 + 15034901 TTAGGTTTAAA-------TTTACTACT----------------------------------------------TT------AGAAAAC-------ATTATGTA-------CAAAACCT------------TTTCTTTCT----------------------------------------TATAGTGA----------------ATTATAT i aotNan1.NW_018507635v1 C 0 I 185 s micMur3.chr14 26338511 69 - 93316391 TTAGATTTATA-------TTTACTATA----------------------------------------------CT------AGTAAAT-------ATTATTTG-------CAAAGATT------------TTTCTTTCT----------------------------------------TACAATGA----------------ATTGTAT i micMur3.chr14 I 561 C 0 s otoGar3.GL873702 962721 197 - 3201129 TTAGATTTACA-------TTATTTGCAAAAATTTCTTTCTTAAAACAAGAAGATATGGAATGTTTCAAATTGTCC------AATAAATTATCCAATTTATTTGGGATATTGAAAAATTCAGTCACCATTACTTATTTCTCTGTGTATTAATATCAAGTGAAGTGATATCCATACATATATAAGATGACTAAGTTCTCTGCTCTATCATAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44060279 78 - 53741614 TATGATTGACATGGTGTGTTCAATACT----------------------------------------------TTATATTCAGTAAAC-------ATGACCTA-------CAAAGATG----------------TTTCT----------------------------------------TAAAGTAT----------------ACTGTGT i canFam3.chr19 I 11 C 0 s dasNov3.JH569232 1781467 69 + 5974691 GTAGGTTTACA-------ATTACTTTT----------------------------------------------TT------AGTAAAC-------AACATTTA-------TAAAGAAA------------TTTCTTTCT----------------------------------------TAAAAGGA----------------ATTTTGT i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=60773.000000 s hg38.chr9_KI270719v1_random 61021 4 + 176845 CTCC s panTro5.chr4 135085810 4 + 194502333 CTCC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66163 4 - 70559 CTCC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480575 4 - 115148730 CTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422110 4 + 190429646 CTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941115 4 + 189454096 CTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932916 4 - 40319822 CTCC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486820 4 - 9219162 CTCC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011716 4 + 135778131 CTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781471 4 - 3013352 CTCC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010416 4 + 8656713 CTCC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456108 4 - 190850796 CTCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6527877 4 - 25294431 CTCC i saiBol1.JH378129 C 0 I 183 s cebCap1.NW_016107420v1 4082590 4 - 6311556 CTCC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14939325 4 + 15034901 CTCC i aotNan1.NW_018507635v1 I 185 C 0 s micMur3.chr14 26338580 4 - 93316391 CTCC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 962918 4 - 3201129 CTCC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44060357 4 - 53741614 CTCA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1781536 4 + 5974691 CTCT i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=288711.000000 s hg38.chr9_KI270719v1_random 61025 27 + 176845 AACTGTTTTTGTTTCTATTTTAAGAAA s panTro5.chr4 135085814 26 + 194502333 AACTGTTTT-GTTTTTATTTTAAGAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66167 27 - 70559 AACTGCTTTTGTTTCTATTTTAAGAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480579 22 - 115148730 AACTGCTTTTGT-----TTTTAAGAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422114 27 + 190429646 AACTGCTTTTGTTTTTATTTTAAGAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941119 27 + 189454096 AACTGCTTTTGTTTTTATTTTAAGAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932920 27 - 40319822 AACTGCTTTTGTTTTTATTTTAAGAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486824 27 - 9219162 AACTGCTTTTGTTTTTATTTTAAGAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011720 27 + 135778131 AACTGCTTTTGTTTTTATTTTAAGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781475 22 - 3013352 AACTGCTTTTGT-----TTTTAAGAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010420 27 + 8656713 AACTGCTTTTGTTTTTATCTTAAGAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456112 27 - 190850796 AGTTGCTTTTGTTTTTATTTTAAGAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528064 27 - 25294431 AACTGCTTTTGTTTTTATTTTAAGAAA i saiBol1.JH378129 I 183 C 0 s cebCap1.NW_016107420v1 4082594 27 - 6311556 AACTGCTTTTGTTTTTATTTTAAGAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14939329 27 + 15034901 AATTGCTTTTGCTTTTATTTTAAGAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26338584 27 - 93316391 AATTGTGTTTGTTTTTATTTTAAGAAA i micMur3.chr14 C 0 I 463 s otoGar3.GL873702 962922 26 - 3201129 AATTGTGTTTGTTTGTATTTTAAGAA- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44060361 25 - 53741614 AATTGCCT--GTTTTTGTTATAAGGGA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1781540 27 + 5974691 AATTATACTTGTTTTCATTATATTGAA i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=487464.000000 s hg38.chr9_KI270719v1_random 61052 62 + 176845 GTAAATATTATGACATAAATGTTTGCAATGTTTTTGTTTAAATA-AAGTATTTCTAGATTTCT s panTro5.chr4 135085840 62 + 194502333 GTAAATATTATGACATAAATGTTTGCAATGTTTTTGTTTAAATA-AAGTATTTCTAGATTTCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66194 62 - 70559 GTAAATATTATGACATAAATGTTTGCAATGTTTTTGTTTAAATA-AAGTATTTCTAGATTTCT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480601 62 - 115148730 GTAAATATTATGAAATAAATGTTTGGAATGTTTTTGTTTAAGTA-AAGTATTTCTAGATTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422141 61 + 190429646 GTAAATATTATGAAATAAATGTTTGCAATGTTTTTGCTT-AATA-AAGTATTTCTAGATTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941146 61 + 189454096 GTAAATATTATGAAATAAATGTTTGCAATGTTTTTGCTT-AATA-AAGTATTTCTAGATTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34932947 61 - 40319822 GTAAATATTATGAAATAAATGTTTGCAATGTTTTTGCTT-AATA-AAGTATTTCTAGATTTCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486851 61 - 9219162 GTAAATATTATGAAATAAATGTTTGCAATGTTTTTGCTT-AATA-AAGTACTTCTAGATTTCT i cerAty1.NW_012000798v1 C 0 I 26 s chlSab2.chr7 79011747 58 + 135778131 ATAAATGTTATGAAATAAATGTGTGCAATGTTTTTGCT----TA-AAGTATTTCTAGATTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781497 61 - 3013352 GTAAATATTATGAAATAAATGTTTGCAATGTTTTTGCTT-AATA-AAGTACTTCTAGATTTCT i manLeu1.NW_012103277v1 C 0 I 26 s colAng1.NW_012114544v1 6010447 62 + 8656713 GTAAATATTATGAAATAAATGTTTGCAATGTTTTTGCTTAAATA-AAGTATTTCTAGATTTCT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456139 55 - 190850796 GTAAATATTATG----AAATGTTTGCAATGTTTG---TCAAATA-AACTATTTCTAGATTTCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528091 55 - 25294431 GAAAATATTATG----AAATGTTTGCAATGTTTT---TTAAATA-AACTATTCCTAGATTTCC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082621 55 - 6311556 GTAAATATTATG----AAATGTTTGCAATGTTTT---TTAAATG-AACTATTTCTAGATTTCC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14939356 55 + 15034901 GTAAATATTATG----AAATGTTTGCAATGTTTT---TTAAATA-AACTATTTCTAGATTTCC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 962948 60 - 3201129 GCTCATATAACAAAATAAGTAGTTGAAATATTTT---CAAAACATAAGCATTTGTAGGTTTCA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44060386 54 - 53741614 CTTAATATTACAGAGTTAATTTTTGCaatttttattttt------a--tttttttaaataCT- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1781567 59 + 5974691 CTCAATATTACAAAATTAATGTTTGCAATGTATT---TAAAAGA-AAAATATTTTAGATTTCT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26338611 463 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=55174.000000 s hg38.chr9_KI270719v1_random 61114 7 + 176845 CTTAATT s panTro5.chr4 135085902 7 + 194502333 CTTAATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66256 7 - 70559 CTTAATT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480663 7 - 115148730 TTTAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422202 7 + 190429646 TTTAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941207 7 + 189454096 TTTAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933008 7 - 40319822 TTTAATT i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79011805 7 + 135778131 TTTAATT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6010509 7 + 8656713 TTTAATT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456194 7 - 190850796 TTTAATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528146 7 - 25294431 TTTAATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082676 7 - 6311556 ATTGATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14939411 7 + 15034901 TTTAATT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 963008 7 - 3201129 TTTTATT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44060440 7 - 53741614 CTTAAGG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1781626 7 + 5974691 TTTAATC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26338611 463 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e manLeu1.NW_012103277v1 2781558 26 - 3013352 I e cerAty1.NW_012000798v1 4486912 26 - 9219162 I a score=18242.000000 s hg38.chr9_KI270719v1_random 61121 3 + 176845 CAT-- s panTro5.chr4 135085909 3 + 194502333 CAT-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66263 3 - 70559 CAT-- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480670 3 - 115148730 CAT-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422209 3 + 190429646 CAT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941214 3 + 189454096 CAT-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933015 3 - 40319822 CAT-- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486938 3 - 9219162 CGT-- i cerAty1.NW_012000798v1 I 26 C 0 s chlSab2.chr7 79011812 3 + 135778131 CAT-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781584 3 - 3013352 CGT-- i manLeu1.NW_012103277v1 I 26 C 0 s colAng1.NW_012114544v1 6010516 3 + 8656713 CAT-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456201 3 - 190850796 GAC-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528153 3 - 25294431 CAT-- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082683 3 - 6311556 CAT-- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14939418 3 + 15034901 CAT-- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44060447 3 - 53741614 CAT-- i canFam3.chr19 C 0 I 1847 s dasNov3.JH569232 1781633 3 + 5974691 --TTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26338611 463 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 963015 0 - 3201129 C a score=170257.000000 s hg38.chr9_KI270719v1_random 61124 18 + 176845 AGTT-ACGTTG--GTTTCTTT s panTro5.chr4 135085912 18 + 194502333 AGTT-ACGTTG--GTTTCTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66266 18 - 70559 AGTT-ACGTTG--GTTTCTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480673 18 - 115148730 AGTT-ACATTG--GTTTCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422212 18 + 190429646 AGTT-ACGTTG--GTTTCTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941217 18 + 189454096 AGTT-ACGTTG--GTTTCTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933018 18 - 40319822 AGTT-ACATTG--GTTTTTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486941 18 - 9219162 TGTT-ACGTTG--GTTTCTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011815 19 + 135778131 AGTTAACATTG--GTTTCTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781587 18 - 3013352 TGTT-ACGTTG--GTTTCTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010519 18 + 8656713 AGTT-ACATTG--GTTTCTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456204 18 - 190850796 AGTC-ACGTTG--GTTTCTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528156 18 - 25294431 AGTT-ATGTTG--GTTTCTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082686 18 - 6311556 AGTT-ACGTTG--GTTTCTTT i cebCap1.NW_016107420v1 C 0 I 182 s aotNan1.NW_018507635v1 14939421 18 + 15034901 AGTC-ACGTTG--GTTTCTTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 963015 17 - 3201129 ---T-ATGTTGAAGTTTGTTT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1781636 18 + 5974691 ACCT-AAATTA--ATTTCTTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26338611 463 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44060450 1847 - 53741614 I a score=82469.000000 s hg38.chr9_KI270719v1_random 61142 8 + 176845 ATTGATGT s panTro5.chr4 135085930 8 + 194502333 ATTGATGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66284 8 - 70559 ATTGATGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480691 8 - 115148730 ATTGATGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422230 8 + 190429646 ACTGATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941235 8 + 189454096 ACTGATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933036 8 - 40319822 ACTGATGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486959 8 - 9219162 ACTGATGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011834 8 + 135778131 ACTGATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781605 8 - 3013352 ACTGATGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010537 8 + 8656713 ACTGATGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456222 8 - 190850796 ATTGATGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528174 8 - 25294431 ATTGATGT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082886 8 - 6311556 ATTGATAT i cebCap1.NW_016107420v1 I 182 C 0 s aotNan1.NW_018507635v1 14939439 8 + 15034901 ATTGATGT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 963032 8 - 3201129 ATGGGTGT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1781654 8 + 5974691 ACAGATGT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26338611 463 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44060450 1847 - 53741614 I a score=3743913.000000 s hg38.chr9_KI270719v1_random 61150 363 + 176845 TCAAACACAGA--CTTTTAAAAATTCATATTTTTTTAAAA-TGTGTGACTATTTACTTTCTAGTTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGTATCTTTTTGTACAGATGCCACCTCTGAATCAAAGCCTTTCAGCAACTGGCAACAGGAAGCTCTAATGCACTTTATCCCTAATAGT-T-AT-AAA-ATACGCAATCATCTGAAATCACATATTGATTTCATATTGATTTCCACTT-C-TTTTCTAACTACGGTTATACGTAAAT--------ATTTCACTTTCAAAAATAGATC--TTTGCCTTTTTA-----------TTTAG--------TTTTTTTTT-TCCTTGGCTTAGAAATAG---TTTTTATGAAATATTCAAATATAAAAATAGTCTG s panTro5.chr4 135085938 352 + 194502333 TCAAACACAGA--CTTTTAAAAATTCATATTTTTTTCAAA--ATGTGACTATTTACTTTCTAGTTCAA-TT-TAAAAAACATTTACCATAAAAATGGCAGTATCTTTTTGTACAGATGCTACCTCTGAATCAAAGCCTCTCAGCAACTGGCAACAGGAAGCTGTAATGCACTTTATCCCTAATAGT-T-AT-AAA-ATACGCAATCATCTGAAATCACATACTGATTTC-----------CACTT-C-TTTTCTAACTACGGTTATATGTAAAT--------ATTTCACTTTCAAAAATAGATC--TTTGCCTTTTTA-----------TTTAG--------TTTTTTTTTCTCCTTGGCTTAGAAATAG---TTTTTATGAAGTATTCAAATACAAACATAGTCTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66292 351 - 70559 TCAAACACAGA--CTTTTAAAAATTCATATTTTTTTCAAAATGTGTGACTATTTACTTTCTAGTTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGTATCTTTTTGTACAGATGCTACCTCTGAATCAAAGCCTCTCAGCAACTGGCAACAGGAAGCTCTAATGCACTTTATCCCTAATAGT-T-AT-AAA-ATACGCAATCATCTGAAATCACATACTGATTTC-----------CACTT-C-TTTTCTAACTACGGTTATATGTAAAT--------ATTTCACTTTCAAAAATAGATC--TTTGCCTTTTTA-----------TTTAG--------TTTTTTT---TCCTTGGCTTAGAAATAG---TTTTTATGAAATATTCAAATACAAACATAGTCTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90480699 349 - 115148730 TCAG----AGA--CTTTTAAAAATTCATATTTTTTTCAAAATGTGTGACTATTTACTTTCTAGTTCAA-TT-TGAAAAGCATTTACCATAAAAATGGCAGTATCTTTTTGTACAGATGCTACCTCTGAATCTAAGCCTCTCAGCAACTGGCAACAGGAAGCCCTAATGCACTTTATCCCTAATAGT-T-AT-AAA-ATATGCAATCATCTGAAATCACATACTGATTTC-----------CACTT-C-TTTTCTAACTACAGTTATATGTAAAT--------ATTTCACTTTCAAAAACAGATC--TTTGCCTTTTTA-----------TTTAG--------TTTTTTTTC-TCCTTGGTTTAGAAATAG---TTTTTATGGAATATTCAAGTACAAACATAGTCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422238 360 + 190429646 TCAAACACAGA--CTTTTAAAAAGTCATA-TTTTTTCAAAATGTGTGATTATTTACTTTCTAGTTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCTGAATCTAAGCCTCTCTGCAACTGGCAACAGGAAGCTCTAATGCACTTTATCCCTAATAGT-T-AT-AAA-ATATGCAATCATCTGAAATCGCATACTGATTTC-----------CACTT-C-TTTTCTAACTATGGTTATATGTAAAT--------ATTTCACTTTCAAAAATAGATC--TTTGCCttttta-----------tttag-ttttttttttttttttCTCCTTGGCTTAGAAATAG---TTTTTATGAAATATTCAAATACAAACATAGTCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941243 358 + 189454096 TCAAACACAGA--CTTTTAAAAAGTCATA-TTTTTTCAAAATGTGTGATTATTTACTTTCTAATTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCTGAATCTAAGCCTCTCTGCAACTGGCAACAGGAAGCTCTAATGCACTTTATCCCTAATAGT-T-AT-AAA-ATATGCAATCATCTGAAATCGCATACTGATTTC-----------CACTT-C-TTTTCTAACTATGGTTATATGTAAAT--------ATTTCACTTTCAAAAATAGATC--TTTGCCttttta-----------tttag---ttttttttttttttCTCCTTGGCTTAGAAATAG---TTTTTATGAAATATTCAAATACAAACATAGTCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933044 355 - 40319822 TCAAACACAGA--CTTTTAAAAAGTCATA-TTTTTTCAAAATGTGTGATTATTTACTTTCTAATTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCTGAATCTAAGCCTCTCTGCAACTGGCAACAGGAAGCTCTAATGCACTTTATCCCTAATAGT-T-AT-AAA-ATATGCAATCATCTGAAATCGCATACTGATTTC-----------CACTT-C-TTTTCTAACTATGGTTATATGTAAAT--------ATTTCACTTTCAAAAATAGATC--TTTGCCTTTTTA-----------TTTAG------TTTTTTTTTTTCTCCTTGGCTTAGAAATAG---TTTTTATGAAATATTCAAATACAAACATAGTCTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4486967 353 - 9219162 TCAAACACAGA--CTTTTAAAAAGTCATA-TTTTTTCAAAATGTGTGATTATTTACTTTCTAGTTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCTGAATCTAAGCCTCTCTGCAACTGGCAACAGGAAGCTCTAATGCACTTTATCCTTAATAGT-T-AT-AAA-ATACGCAATCATCTGAAATCGCATACTGATTTC-----------CACTT-C-TTTTCTAACTATGGTTATATGTAAAT--------ATTTCACTTTCAAAAATAGATC--TTTGCCTTTTTA-----------TTTAG--------TTTTTTTTTCTCCTTGGCTTAGAAATAG---TTTTTATGAAATATTCAAATACAAACATAGTCTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79011842 360 + 135778131 TCAAACACAGA--CTTTTAAAAATTCATATTTTTTTCAAAATGTGTGATTATTTACTTTCTAGTTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAACATCTTTTTGTACAGATGCTACCTCTGAGTCTAAGCCTCTCTGCAACTGGCAACAGGAAGCTCTAATGCACTTTATCCCTAATAGT-T-AT-AAA-ATACCCAATCATCTGAAATCACATACTGATTTC-----------CACTT-C-TTTTCTAACTATGGTTATATGTAAAT--------ATTTCACTTTCAAAAATAGATC--TTTGCCTTTTTA-----------TTTAG--CTTTTTTTTTTCTTTCTCCTTGGCTTAGAAATCG---TTTTTATGAAATATTCAAATACAAACATAGTCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781613 353 - 3013352 TCAAACACAGA--CTTTTAAAAAGTCATA-TTTTTTCAAAATGTGTGATTATTTACTTTCTAGTTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCTGAATCTAAGCCTCTCTGCAACTGGCAACAGGAAGCTCTAATGCACTTTATCCTTAATAGT-T-AT-AAA-ATACGCAATCATCTGAAATCGCATACTGATTTC-----------CACTT-C-ATTTCTAACTATGGTTATATGTAAAT--------ATTTCACTTTCAAAAATAGATC--TTTGCCTTTTTA-----------TTTAG--------TTTTTTTTTCTCCTTGGCTTAGAAATAG---TTTTTATGAAATATTCAAATACAAACATAGTCTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010545 355 + 8656713 TCAAACACAGA--CTTTTAAAAATTCATATTTTTTTCAAAATGTGTCATTATTTACTTTCTAGTTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCTGAATCTAAGCCTCTCTGCAACTGGCAACAGGAAGCTCTAATACTCTTTATCCCTAATAGT-T-AT-AAA-ATATGCAATCATCTGAAATCACATACTGATTTC-----------TACTT-C-TTTTCTAACTATGGTTATATGTAAAC--------ATTTCACTTTCAAAAATAGATC--TTTGCCTTTTTA-----------TTTAG-------TTTTTTTTTTCTCCTTGGTTTGGAAATAG---TTTTTATGAAATATTCAAATACAAACATAGTCTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456230 353 - 190850796 TCAAACACAGA--CTTTTAAAAATTCATA-TTTTTAAAAAATGTGTGACTATTTACCTTCTAGTTCAA-TT-TAAAAAGTGTTTACCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCTGAATCTAAGCCTCTCCGTGACTGGCAACAGGAAGCTCTAATGCACTTTCTCCCTAATAGT-T-AT-AAA-ATATGCAATCATTAGAAATCACATACTGATTTT-----------CACTT-C-TTTTCAAACTATGATTATATGTAAAT--------ATTTTACTTTCAAAAATATATC--TTTTCCTTTTTA-----------TTTAG--------TTTTTTCTTCTCCTTGGCTTAGAAATAG---TTTTTATAAAATATTCAAATACAAACATAGTTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528182 353 - 25294431 TCAAACACAGA--CTTTTAAAAATTCATA-TTTTTAAAAAATGTGTGAC-ATTTACTTCCTAGTTCAA-TT-TAAAAAGCATTTGCCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCTGGATCTAAGCCTCTCAGCGACTGGCAACAGGAAGCTCTAATGCACTTTCTCCCTAATAGT-TGAA-AAA-ATATGCAATCATCTAAAATCACATACTGATTTT-----------CACTT-C-TTTTTGAACTATGATTATATGTAAAT--------ATTTTACTTTCAAAAATAGATC--TTTTCCTTTTTG-----------TTTAG--------GTTTTTCTTCTCTTTGGCTTAGAAATAG---TTTTTATGAAATATTCAAATACAAACATAGTCTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4082894 354 - 6311556 TCAAACACAGA--CTTTTAAAAATTCATATTTTTTTAAAAATGTGTGACTATTTACTTTCTAGTTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCCGAATCTAAGCCTCTCAGCGACTGGCAACAGGAAGCTCTAATGCACTTTCTCCCTAATAGT-T-AT-AAA-ATATGCAATCATCTGAAATCACATACTGATTTT-----------CACTT-C-TTTTCGAACTATGATTATATGTAAAT--------ATTTTACTTTCAAAAATAGAtc--ttttcctttttg-----------tttag--------ttttttcttcttcttGGCTTACAAATAG---TTTTTATGAGATATTCAAATACAAACATAGTCTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14939447 352 + 15034901 TCAAACACAGA--CTTTTAAAAATTCATA--TTTAAAAAAATGTGTGACTATTTACTTTCTAGTTCAA-TT-TAAAAAGCATTTACCATAAAAATGGCAGCATCTTTTTGTACAGATGCTACCTCTGAATCTAAGCCTCTCAGCCACTGGCAACAGAAAGCTCTAATGCACTTTCTCCCTAATAGT-T-AT-AAA-ATACGCAATCATCTGAAATCACATACTGATTTT-----------CACTT-C-TTTTCAAACTATGATTATATGTAAAT--------ATTTTACTTTCAAAAATAGATC--TTTTCTTTTTTG-----------TTTAG--------TTTTTTCTTCTCCTTAGCTTAGAAATAG---TTTTTATAAAATATTCAAATACAAACATAGTCTC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 963040 367 - 3201129 TCACACATAGA--TTATTAAAAATTCAATTGTTTTTCAAAATGCATGACTATTTAACTTCTAGTTCAATTT-TAAAAGGCACTTCCCATAACAACGACAGCGAC--TCTGTTCAGATGCTTCCTCTGAATCTCACCTTTTCAGCAACTGGGATAATGAAGCTCTGATACACTTTCTCCCTAATAGTAT-AT-AAATACATGCAATCATCTGAAATAACATATATATTTT-----------CACTT-CTTTTTCTAACTATGTCTATGTAAAAAT--------ATTTTACTTTCAAAAGTAGATC--TCTGCCTTTTTC-----------TTTAGCTTTCTTCTTCTTTTTCCTCATTGGTTTCTGAGTAGATTTTTGTATGAAATATTAAAATGCAAACATAGTCTC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44062297 309 - 53741614 TTAAACACAAA--CTTTTTAAAG-TCATA--TTTTAAAAAATGTATATCTGCTTGCTTTCTAGTTCAG-TTGTAAAATGAATTTACCAGAAAAATGGCAATAATTCTTTGT----------------------------------------------------------------------------T-AT-AG--ATGTTCAATCATCTGAAATCACATACTGATTTC-----------CACTTAT-TTTTCCAACTATGATTATATATAAATAGTTTTAAATTTTACTTTTAGAAGTAGCTCTTTTTGCCTTTTTAAAAAATTTTGTTTTTGTTTTGTTTTGTTTTTTGCTCCCTGGTTTAAGAATAGGTTCTTGTGTGAAATACTAAAAGACAAACATAGTCTC i canFam3.chr19 I 1847 C 0 s dasNov3.JH569232 1781662 358 + 5974691 ----TCATAGATCTTTTTTAAAGTCGATG---TTTTCATGATGTATGGCTATTTACTTTCTAGTTCAA-TT-TTAAAAGCATTTGCAAATACAAGAGTAGCGTCTTTAAATACAGATGCTACTTCTAAGTCTAAACCTCTCAGAAACTCACAACAGGAAGCTCTGGGACACTTTCTTCATTATAGTTT-ATGAAA-ATATGCAATCATCTGAAATGACATACTGATTTC-----------CACTT-CTTTTTCTAACTGCAGTTATATAAAAAT--------ATTTTACTTTCAAATGCAGCCC--TTTGCCTTTTTC-----------AAAGA-----TTCCTTTTTTTTTTCTTCAGTTTAGGAATAAATTCTTGTGCAAAGTAAGAAAATACAAACATAGCCTC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26338611 463 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=2821671.000000 s hg38.chr9_KI270719v1_random 61513 253 + 176845 TAAAAGCAAAGTATGGTTCTTTTTCAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTATATAAGTGATAAATG-TTTTTCTGAATGGGAATTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAGAACTTTAT-------------ATTTATTCCTGGGTAAATCACCCATTTCCTTGTTCATCAAGATCAGGTGAAATGATATCCA------TATGAGATAATTAATTCCTCTGCTATCT--ATTTTATTA s panTro5.chr4 135086290 253 + 194502333 TAAAAGCAAAGTATGGTTCTTTGTCAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTACATAAGTGATAAATG-TTTTTCTGAATGGCAATTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAGAAGTTTAT-------------ATTCATTCCTGGGTAAATCACCCATTTCCTTGTTCATCAAGATCAGGTGAAATGATATCCA------TATGAGATAATTAATTCCTCTGCTATCT--ATTTTATTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66643 253 - 70559 TAAAAGCAAAGTATGGTTCTTTGTCAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTATATAAGTGATAAATG-TTTTTCTGAATGGGAATTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAGAACTTTAT-------------ATTTATTCCTGGGTAAATCACTCATTTCCTTGTTCATCAAGATCAGGTGAAATGATATCCA------TATGAGATAATTAATTCCTCTGCTATCT--ATTTTATTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481048 250 - 115148730 TAAAAGCAAAGTATGGTTCTTTGTCAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTATAT--GTGATAAATG-TTTTTCTGAATGGCAATTTACCTAAAGTGTTTCAAAATTAGGTGATCATTTGTGCTTTCCAAA-CCA-----TACAGAACTTTAT-------------ATTTATTTCTGGGTAAATCACCCATTTCCTTGTTCATCAAGATCAGGTGAATTGATATCCA------TATGAGATAATTAATTCC-CCGTTATCT--ATTTTATTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422598 253 + 190429646 TAAAAGCAAAGTATGGTTCTTTGTTAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTATACAAGTGACAAATG-TTTTTCTGAATGGCAGTTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAGAACTTCAC-------------ATTTATTCCTGGGTAAATCATTCATTTCCTTCTTCATCAAGATCAGATGAAATGATATCCG------TATGAGATAATTAATTCCTCTGCTATCT--ATTTTATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941601 253 + 189454096 TAAAAGCAAAGTATGGTTCTTTGTTAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTATACAAGTGACAAATG-TTTTTCTGAATGGCAGTTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAGAACTTCAC-------------ATTTATTCCTGGGTAAATCATTCATTTCCTTCTTCATCAAGATCAGATGAAATGATATCCG------TATGAGATAATTAATTCCTCTGCTATCT--ATTTTATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933399 253 - 40319822 TAAAAGCAAAGTATGGTTCTTTGTTAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTATACAAGTGACAAATG-TTTTTCTGAATGGCAGTTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAGAACTTCAC-------------ATTTATTCCTGGGTAAATCATTCATTTCCTTCTTCATCAAGATCAGATGAAATGATATCCG------TATGAGATAATTAATTCCTCTGCTATCT--ATTTTATTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4487320 253 - 9219162 TAAAAGCAAAGTATGGTTCTTTGTCAGCCAAAACACTCTCCC---CTAAGCATTTCATTAGTTATACAAGTGACAAATG-TTTTTCTGAATGGCAGTTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAGAACTTCAC-------------ATTTATTCCTGGGTAAATCATTCATTTCCTTCTTCATCAAGATCAGATGAAATGATATCCA------TATGAGATAATTAATTCCTCTGCTATCT--ATTTTATTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79012202 249 + 135778131 TAAAAGCAAAGTATGGTTCTTTGTCAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTATACAAGTGATAAATG-TTTTTCTGAATGGCAGTTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAGAACTTCAC-------------ATTTATTCCTGGGTAAATCACTAATTTCCTTCTTCATCAAGATCAGATGAAATGATATCTG------TATGAGATAATTAATTCCTCTG----CT--ATTTTATTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2781966 253 - 3013352 TAAAAGCAAAGTATGGTTCTTTGTCAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTATACAAGTGACAAATG-TTTTTCTGAATGGCAGTTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAAAACTTCAC-------------ATTTATTCCTGGGTAAATCATTCATTTCCTTCTTCATCAAGATCAGATGAAATGATATCCG------TAGGAGATAATTAATTCCTCTGCTATCT--ATTTTATTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6010900 253 + 8656713 TAAAAGCAAAGTATGGTTCTTTGTCAGCCAAAACACTTTCCC---CTAAGCATTTCATTAGTTATACAAGTGATAAATG-TTTTTCTGAATGGCAGTTTACCTAAAGTGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CCA-----TACAGAACTTCAC-------------ATTTATTCCTGGGTAAATCACTCATTTCCTTGTTCATCAAGATCAGATGAAATGATATCCG------TATGAGATAATTAATTCCTCTGCTATCT--ATTTTATTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456583 247 - 190850796 TAAAAGCACACTATGGTTCCTTGTGAGTCAAACCACTTTTCC---CTAAGCATTTCATTAGTTATATAAGTGATAAATG-TTTTTCTGAATGGCAGTTTACCTAAAATGTTTGAAAATTAGGTGACCATTTGTGCTTTCCAAA-CC------TACAGAATTTTAC-------------ATTGATTTCTGGGTAAATCACCCATTTCTCTGTTCATCAATATCAAGTAAAATG-TATCCA------TATAAGATGATTAATTCCTCTG----TT--ATTTTATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528535 236 - 25294431 TAAAAGCACAC--TGGTTCTTTGTCAGTCAAACCACTTTACC---CTAAGCATTTCATTAGTTATATAAGTGATAAATG-TTTTTCTGAATAGCAATTTACCTAAAATGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CC------TACAGAATTTTAC-------------ATTTATTCCTGGGTAAA---------TCTCTGTTCATCAATATCAAGTGAAATG-TATCCA------TATGAAATGATTAATTCCTCTG----CT--ATTTTATTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4083248 247 - 6311556 TAAAAGCACACTATGGTTCTTTGTCAGTCAAACCACTTTCCC---CTAAGCATTTCATTAGTTGTATAAGTGATAAATA-TTTTTCTGAATGGCAATTTACCTGAAACGTTTCAAAATTAGGTGACCATTTGTGCTTTCCAAA-CC------TACAGAATTTTAC-------------ATTTATTCCTGGGTAAATCACCCATTTCTCTGTTCATCAATATCAAGTGAAATG-TATCCA------TATGAGATGATTAATTCCTCTG----CT--ATTTTATTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14939799 252 + 15034901 TAAAAGCACACTATGGTTCTTTGTCAGTCAAACCACTTTTTC---CTAAGCATTTCATTAGTTATATAAGTGATAAATGTTTTTTCTGAATGGCAATTTACCTAAAATGTTTGAAAATTAGGTGACCATTTGTGCTTTCCAAA-CC------TACAGAATTTTAC-------------ATTTATTCCTGGGTAAATCACCCATTTCTCTGTTCATCAATATCAAGTGAAATG-TATCCA------TATGAGATGATTAATTCCTCTGCTATCT--ATTTTATTT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26339074 266 - 93316391 TAAAAGCAAAGTGTAGTTTTTTGTTAGCCAAATTATTTTCCT---CTGAGCTTTCAATTTGTTGTATACGTGATAAATG-TTTTTCTGAATGGCAATTTACTTGCAATATTCCAAAATTAGGTGAACATTCGTGCCTTCCAAG-CCA-----CAGAGAATTTTGCTGTCTTGTGTTACATTTATTTCTGGGTAAATCATTTGTTTCTTTGTGTATCAATGTCGAGTGAAATGATATCCA------TATGAGATAATTAATTTATCTGCTATAT--ATTTTATTA i micMur3.chr14 I 463 I 92 s otoGar3.GL873702 963407 273 - 3201129 TAAAAGGAAAAGGTCATTCTTTGTTAGCAAAAATATTCCCCTTCCCCAAGATTTTAATTTATTGTATAAGTGATAAATA-CTTATCTGAATGGCAGTTTATTTGAGATGTTCCAAAATTCAGTGACCCGTTGGACCGTCCAAA-AAA-----CAGAGAACTTTTC--TCTTGTGTTACATTTATTCTTGGGTAAATCACTTATTTGTCTGTATATCAATATCAAGTGAAGTGACATCCAGACAAGTATAAGATGATTAATTTCTCTGCTATAT--ATTTTATTA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44062606 246 - 53741614 -TAAGGCAAACTACAGTTCTTTGTCAATCAAAACATTTCCCC---CTGAGGTTTTCATTTGTTATAT--GTGATTAATG-TTTTACTGAGTGGCAATTTACCTGAAATGTTTCAAAGTTATGTGACCATTTACACTCCCAAAA-CTATTTTTTGTCTTGTCTTAA-------------ATTTAT------ATAAATCACTTATCTC--TGTGGAATAATGTCATGTGACATGATCCCCT------TATGAGATACTTAATTCTTCTGCTACATAGATTTTA--- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1782020 246 + 5974691 -TAAAGGAAAGCACAG----TTGTCAGGAAAAATGTTTTCCC---TAAAGATTTTAATTTATTGTATAAGTGAATGATA-T---------------TTCACCTAAAACATTACAAAATTAGGTGAACATTTGTACCTTCCAAAGCTA-----AAGAGAATTTTTCTTTTTGGTATAACATTTAATCCTGGATAAATCACATATATCTGTGTGCATCAAGGTCAAATAAAAAGATTCCCA------TA-GAGATTATTAATTCTTCTACaatat--attttatta i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=829197.000000 s hg38.chr9_KI270719v1_random 61766 88 + 176845 TACTTAGTTATCCATTGAAAATAAATATCTACTATA-ACA-AGTAAAATATATAATAGTGTAGAAG-ACAA-AAGAGTATGTGTTTGCAGTA s panTro5.chr4 135086543 89 + 194502333 TACTTAGTTATTCATCTAAAATAAATATCTACTATA-ACA-AGTAAAATATATAATAGTGTAGAAG-ACAACAAGTGTATGTGTTTGCAGTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66896 89 - 70559 TACTTAGTTATTCATCGAAAATAAATATCTACTATA-ACA-AGTAAAATATATAATAGTGTAGAAG-ACAACAAGAGTATGTGTTTGCAGTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481298 87 - 115148730 TACTTAGTTATTCATGTAAAATAAATATCTACTATA-ACA-AGTAAAATATATAATAATGTAGAAG-ACAAC--GTGTATGTGTTTGCAGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422851 85 + 190429646 TAC----TTACTCATCAAAAATAAATATCTGCTATA-ACA-AGTGAAATATATAACAGTGTAGAAG-ACAACAAGTGTATGTGTTTGCAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941854 89 + 189454096 TACTTAGTTACTCATCAAAAATAAATATCTGCTATA-ACA-AGTGAAATATATAACAGTGTAGAAG-ACAACAAGTGTATGTGTTTGCAGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933652 89 - 40319822 TACTTAGTTACTCATCAAAAATAAATATCTGCTATA-ACA-AGTGAAATATATAACAGTGTAGAAG-ACAACAAGTGTATGTGTTTGCAGTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4487573 89 - 9219162 TACTTAGTTACTCATCAAAAATAAATATCTGCTATA-ACA-AGTGAAATATATAACAGTGTAGAAG-ACAACAAGTGTATGTGTTTGCAGTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79012451 89 + 135778131 TACTTAGTTACTCATCAAAAATAAATATCTGCTATA-ACA-AGTGAAATATGTAACAGTGTAGAAG-ACAACAAGTGTATGTGTTTGCAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2782219 89 - 3013352 TACTTAGTTACTCATCAAAAATAAATATCTGCTATA-ACA-AGTGAAATATGTAACAGTGTAGAAG-ACAACAAGTGTATGTGTTTGCAGTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6011153 89 + 8656713 TACTTAGTTACTCATCAAAAATAAATATCTGCTACA-ACA-AGTGAAATATATAACAGTGTAGAAG-ACAACAAGTGTATGTGTTTGCAGTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456830 85 - 190850796 TACTTTGTTATTCATCTAAAATAAATATCTGCTATA-GCA-AGTAAAATAAGTGATACTGTAGAAG-ATAACAAGTGTAT----TTGCAGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528771 88 - 25294431 TACTTAGTTATTCATCTAAAATAAATATCTGCTATA-GCA-AGTAAAATATGTGATACTGTAGAGG-ATAACAAGTGTATGTG-TTGCAGTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4083495 89 - 6311556 TACCTAGTTATTCATATAAAATAAATATCTGCTATA-GCA-AGTAAAATATGTGATACTGTAGAAG-ATAACAAGTGTATGTGTTTGCAGTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940051 89 + 15034901 TACTTAGTTATTCATCTAAAATAAATATCTGCTATA-GCA-AGTAAAATATGTGATACTGTAGAAG-GTAACAAgtgtatgtgtttgcagta i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 963680 79 - 3201129 TGCTTAATGCATTTCTAATGATAAATATTTCTTATATGTA-GGTAAAATATATGATGATGCAGTAA---AACAAATGTATGAA--------- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44062852 84 - 53741614 TACTTACTAATTCTTTTAA---AAATAGTTTCTATA-CTATAGTATAATATGTAACAATGTAGAAAAATAACAAGTGTATGTGT----GGTA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1782266 86 + 5974691 tatttaataatgcttttaaaataattatttgatata-aat-agtaaaatataaaataatGTTGTAG-A-AACAAGTGTATCTG--TGTGATA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339340 92 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=1036231.000000 s hg38.chr9_KI270719v1_random 61854 94 + 176845 TGTGTAATAG-AGTTA---AATATAT-CTAAATATA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGC s panTro5.chr4 135086632 94 + 194502333 TGTGTAATAG-AGTTA---AATATAT-CTAAATATA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 66985 94 - 70559 TGTGTAATAG-AGTTA---AATATAT-CTAAATATA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481385 94 - 115148730 TGTGTAATAG-AGTTA---AATATAT-CTAAATATA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131422936 94 + 190429646 TGTGTAATAG-AGTTA---AATATAT-CTAAATACA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130941943 94 + 189454096 TGTGTAATAG-AGTTA---AATATAT-CTAAATACA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933741 94 - 40319822 TGTGTAATAG-AGTTA---AATATAT-CTAAATACA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4487662 94 - 9219162 TGTGTAATAG-AGTTA---AATATAT-CTAAATACA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79012540 94 + 135778131 TGTGTAATAG-AGTTA---AATATAT-CTAAATACA-ATATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2782308 94 - 3013352 TGTGTAATAG-AGTTA---AATATAT-CTAAATACA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6011242 94 + 8656713 TGTGTAATAG-AGTTA---AATATAT-CTAAATACA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACCCTCATTAAAGCAAAGGGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129456915 92 - 190850796 TGTGTAATAG-AGTTA---AATATAT-AT--ATATA-GTATGTCTGT-ATTAAG-GCA---------ATGAACAT-----CAATTTTAGCT---------AATCACACTCATTAAAGCAAAGGAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528859 94 - 25294431 TGTGTAATAG-AGTTA---AATATAT-ATAAATATG-ATATGTCTGT-ATTAAG-GCA---------ATGAACAT-----GAATTTTAGTT---------AATCACACTCATTAAAGCAAAGGGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4083584 95 - 6311556 TGTGTAATAG-AGTTA---AATATAT-ATAAATGTA-GTATGTCTGTAATTAAG-GCA---------ATGAACAT-----GAATTTTAGTT---------AATCACACTCATTAAAGCAAAGGGC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940140 94 + 15034901 tgtgtaatag-agtta---aatatat-gtaaatgta-gtatgtCTGT-ATTAAG-GTA---------ATGAACAT-----GAATTTTAGTT---------AATCACACTCATTAAAGCAAAGGGC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26339432 94 - 93316391 TGTGTGATAG-AGTTA---AAGATAT-CTAAATATA-TTATGTATAT-ATTAGACGCA---------ATGGACAT-----CAATCTAAGCC----------ATGACCCTCATTAAAGCAAAAGGC i micMur3.chr14 I 92 I 74 s otoGar3.GL873702 963759 82 - 3201129 TGTGTGATAC-AGTTA---AATATAT-CTAAATACA-GTCTGTATAT-ATTATG-GCA---------ATGGGCAT-----CAGT-----------------GTGACTCTCATTAAAG----AGGC i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44062936 87 - 53741614 TGTATGGTAG-AGTTGTTCAATAAATGACAGATATACACATGCACCT-ATGAAG-ACA---------A---------------GCCCAGCT----------ATAACTCCCA-AAAAGCAACAGAC i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1782352 118 + 5974691 TGTGCTATAGTTGTTA---AATATAT-CCAAATATT-ATATATGTAT-ATAAAG-GCATATACTTACATATGCATAAAGGCAATTTCAACTCTCAGCTATGATCACTTTCATTAAAACAAAAGAC i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=639248.000000 s hg38.chr9_KI270719v1_random 61948 76 + 176845 ACTACCATATGTGAC-ATAGTTATCATTGA---CAGTCTGATAAATCTTGTAGCTGAGGTAACGGACAGGGAAGAGTTTG s panTro5.chr4 135086726 76 + 194502333 ACTACCATATGTGAC-ATAGTTATCATTGA---CAGTCTGATAAATCTTGTAGCTGAGGTAATGGACAGGGAAGAGTTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67079 76 - 70559 ACTACCATATGTGAC-ATAGTTATCATTGA---CAGTCTGATAAATCTTGTAGCTGAGGTAATGGACAGGGAAGAGTTTG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481479 76 - 115148730 ACTACCATATGTGAC-ATAGTTACCATTGA---CAGTCTGATAAATCTTGTAGCTGAGGTAATGGACAGGAAAGAGTTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423030 71 + 190429646 ACTACCATATGTGAC-ATAGTTATCACTGA-------CTGATACATCTGGTAGCTGA-GTAGCTGACAGGGAAGAGTTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942037 72 + 189454096 ACTACCATATGTGAC-ATAGTTATCACTGA-------CTGATACATCTGGTAGCTGAGGTAGCTGACAGGGAAGAGTTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933835 72 - 40319822 ACTACCATATGTGAC-ATAGTTATCACTGA-------CTGATACATCTGGTAGCTGAGGTAGCTGACAGGGAAGAGTTTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4487756 76 - 9219162 ACTATCATATGTGAC-ATAGTTATCACTGA---CTGTCTGATACATCTGGTAGCTGAGGTAGCTGACAGGGAAGAGTTTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79012634 76 + 135778131 ACAACCATATGTGAC-ATAGTTATCACTGA---CCGTCTGATACATCTGGTAGCTGAGGTAGCTGACAGGGAAGAGTTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2782402 76 - 3013352 ACTACCATATGTGAC-ATAGTTATCACTGA---CTGTCTGATACATCTGGTAGCTGAGGTAGCTGACAGGGAAGAGTTTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6011336 76 + 8656713 ACTACCATATGTGAC-ATAGTTATCACTGA---CTGTCTGATACATCTGGTAGCTGAGGTAGCTGACAGGGAAGAGTTTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457007 76 - 190850796 ACTAACATATGTGAC-ATTATTATCATTGA---CACTCAGACAAATCTTGTACCTGAGGTGACTGACAGGGAAGAGTTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6528953 76 - 25294431 ACTATCATATGTGAC-ATCATTATCATTGA---CACTCAGACAAATCTTGTACCTTAGGTGACTGACAGGGATGATTTTG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4083679 76 - 6311556 ACTACCATATGTGAC-ATCATTATCATTGA---CACTCAGAAAAATCTTGTACCTGAGGTGACTGACGGGGAAGAGTTTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940234 76 + 15034901 ACTACCATATGTAAC-ATTGTTATCATTGA---CACTCAGACAAATCTTGTACCTGAGGTGACTGACAGGGAAGAGTTTG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 963841 77 - 3201129 ACAGGCATATGTGTCTATAGTTGTCCCTGA---CAGTGTGACCCATCTTATAACTGAGTTGATTAACAGGAAAACCTTTG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44063023 75 - 53741614 ACTGCTATACATATCTAATATTACCACTGA---CAATCTGACCAATTTTATAGCTGAGTTCATTGCAAATG--GAGTTTA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1782470 76 + 5974691 ACCTGCACACACATC-TAAAATTTTTCTGAAATCAGTGTGGCCGAACTTTAAGCTGAATTAATTGAGACTAAA---TTTA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339526 74 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=478318.000000 s hg38.chr9_KI270719v1_random 62024 41 + 176845 TGATAGTGAAATATGTAGAACTAAGATCAAATTACCAAATA s panTro5.chr4 135086802 41 + 194502333 TGATAGTGAAATTTGTAGAACTAAGATCAAATTACCAAATA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67155 41 - 70559 TGATAGTGAAATTTGTAGAACTAAGATCAAATTACCAAATA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481555 41 - 115148730 TGATAGTGAAATTTGTAGAACTAAGATCAAATTACCAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423101 41 + 190429646 TGATAGTGAAATTTGTAGAACTAAGATAAAATTACCAAACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942109 41 + 189454096 TGATAGTGAAATTTGTAGAACTAAGATAAAATTACCAAACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933907 41 - 40319822 TGATAGTGAAATTTGTAGAACTAAGATAAAATTACCAAACA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4487832 41 - 9219162 GGATAGTGAAATTTGTAGAACTAAGATAAAATTACCAAACA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79012710 41 + 135778131 TGATAGTGAAATTTGTAGAACTAAGGTAAAATTACCAAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2782478 41 - 3013352 TGATAGTGAAATTTGTAGAACTAAGATAAAATTACCAAACA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6011412 41 + 8656713 TGATAGTGAAATTTGTAGAACTGAGATAAAATTACCAAATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457083 41 - 190850796 TGATAGTGAAATTTGTAGAACTACGATCCAATGACAAAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6529029 41 - 25294431 TGATAGTGAAACTTGTAGAACTCAGATCTAATAAGCAAATA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4083755 41 - 6311556 TGATAGTGAAATTTGTAGAACTAAGATCTAATAACCAAACA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940310 41 + 15034901 TGATAGTGAAATTTGTAGAACTCAGATCTAATGACCAAATA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26339600 41 - 93316391 TGATAGTGAAATTTGTAGAACTAAGATCAAATGACCAAATA i micMur3.chr14 I 74 I 4850 s otoGar3.GL873702 963918 39 - 3201129 --CTAGTGAAATTTGTAGAACTAAGATCAAATTACCAAATA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44063098 41 - 53741614 GGAGAGCAAAGTGTGTAGAACCAGAAAATAATGACCAAATA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1782546 40 + 5974691 TGGTCGTGACGTTTGTAAAATCAAGACTCCATGG-CAGTTA i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=2458204.000000 s hg38.chr9_KI270719v1_random 62065 273 + 176845 CATAGGCATTATTAAACAAATTCTCACCAATTACTTC-AAAAATATTGTAACTTCTATTTA---------------ATATTTC---------------------TTG-------------------TTTTTAATCTTAAAAACTC--------------------TAAATTGAGTAGAATTTGAAATAGCAGTA------AATTTCAGGTTAATGGAAA----TAAAATCACACTTGTTATTATTGTTCAATTTTTTTTATTAAGTCTGAAGAAATATTTAATTGAATATGACATCTAAGAATGATGGACAAAAGCTTTTT-----TTCTTTCCACTCCTTTTTCTGAAAGCTTTGATACAAAA s panTro5.chr4 135086843 277 + 194502333 CATAGGCATTATTAAACAAATTCTCATCAATTACTTC-AAAAATATTGTAACTTCTATTTA---------------ATATTTC---------------------TTG-------------------TTTTTAATCTTAAAAACTC--------------------TACATTGAGTAGAACTTGAAATAGCAGTA------AATTTCAGGTTAATGGAAA----TAAAATCACACTTGTTATTATTGTTCAATTTTTTT-ATTAAGTCTGAAGAAATATTTAATTGAATATGACATCTAAGAATGATGGACAAAAGCTTTTTAAATTTTCTTTCCACTCCTTTTTCTGAAAGCTTTGATACAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67196 276 - 70559 CGTAGGCATTATTAA--AAATTCTCACCAATTACTTC-AAAAATATTGTAACTTCTATTTA---------------ATATTTC---------------------TTG-------------------TTTTTAATCTTAAAAACTC--------------------TAAATTGAGTAGAATTTGAAATAGCAGTA------AATTTCAGGTTAATGGAAA----TAAAATCACACTTGTTATTATTGTTCAATTTTTTTTATTAAGTCTGAAGAAATATTTAATTGAATATGACATCTAAGAATGATGGACAAAAGCTTTTTAAATTTTCTTTCCACTCCTTTTTCTGAAAGCTTTGATACAAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481596 253 - 115148730 CATAGGCATTATTAAACAAATTCTCACCAATTACTTC-AAAAATATTGTAACGTCTATTTA---------------ATATTTC---------------------TTG-------------------CTTTTAATCTTAAAAACTC--------------------TAAATTGAGTAGAATTTGAAATAGCAGTA------AATTTCAGGTTAATGGAAA----TAAAATCACACTTG---TTATTGTTCAATTTTTTTTACT---------GAAATATGTAATTGAATATGATAT-------------ACAAAAGCTTTTTAAATTTTCTTTCCACTCCTTTTTCTGAAAGCTTTGACACAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423142 278 + 190429646 CGTAGGCATTATTAAACAAATTCTCACCAATTACTTCAAAAAATATTGTAACTTCTATTTA---------------ATATTTC---------------------TTA-------------------TTTTTAATCTTAAAAACTC--------------------TAAATTGAGTAGAATTTGAAATAGCAGTA------AATTTCAGGTTAATGGAAA----TAAAATCATGCTTGTTATTATTGTTCAATTTCTTT-ATTAAGTCTGAAGAAACATTTAATTGAATATGACATGTAAGAGTGAGGGACAAAAGCTTTTTAAATTTTCTTTTCACTCCTTTCTTTGAAAGCTTTGACACAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942150 278 + 189454096 CGTAGGCATTATTAAACAAATTCTCACCAATTACTTCAAAAAATATTGTAACTTCTATTTA---------------ATATTTC---------------------TTA-------------------TTTTTAATCTTAAAAACTC--------------------TAAATTGAGTAGAATTTGAAATAGCAGTA------AATTTCAGGTTAATGGAAA----TAAAATCATGCTTGTTATTATTGTTCAATTTCTTT-ATTAAGTCTGAAGAAACATTTAATTGAATATGACATCTAAGAGTGAGGGACAAAAGCTTTTTAAATTTTCTTTTCACTCCTTTCTTTGAAAGCTTTGACACAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34933948 276 - 40319822 CGTAGGCATTATTAAACAAATTCTCACCAATTACTTCAAAAAATATTGTAACTTCTATTTA---------------ATATTTC---------------------TTA-------------------TTTTTAATCTTAAAAA--C--------------------TAAATTGAGTAGAATTTGAAATAGCAGTA------AATTTCAGGTTAATGGAAA----TAAAATCATGCTTGTTATTATTGTTCAATTTCTTT-ATTAAGTCTGAAGAAACATTTAATTGAATATGACATCTAAGAGTGAGGGACAAAAGCTTTTTAAATTTTCTTTTCACTCCTTTCTTTGAAAGCTTTGACACAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4487873 277 - 9219162 CATAGGCATTATTAAACAAATTCTCACCAATTACTTC-AAAAATATTGTAACTTCTATTTA---------------ATATTTC---------------------TTA-------------------TTTTTAATCTTAAAATCTC--------------------TAAATTGAGTAGAATTTGAAATAGCAGTA------AATTTCAGGTTAATGGAAA----TAAAATCATGCTTGTTATTATTGTTCAATTTTTTT-ATTAAGTCTGAAGAAACATTTAATTGAATATGACATCTAAGAGTGAGGGACAAAAGCTTTTTAAATTTTCTTTTCACTCCTTTCTCTGAAAGCTTTGACACAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79012751 278 + 135778131 TGTGGGCATTATTAAACAAATTCTCACCAATTACTTCAAAAAATATTGTAACTTCTATTTA---------------ATATTTC---------------------TTA-------------------TTTTTAATCTTAAAAACTC--------------------TAAATTGAGTAGAATTTGAAATAGCAGTA------AATTTCAGGTTAATGAAAA----TAAAATCATGCTTGTTATTATTGTTCAATTTATTT-ATTAAGTCTGAAGAAACATTTAATTGAATATGACATCTAAGAGTGAGGGACAAAAGCTTTTTAAATTTTCTTTTCACCTCTTTTTCTGAAAGCTTTGACACAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2782519 278 - 3013352 CGTAGGCATTATTAAACAAATTCTCACCAATTACTTCAAAAAATATTGCAACTTCTATTTA---------------ATATTTC---------------------TTA-------------------TTTTTAATCTTAAAAACTC--------------------TAAATTGAGTAGAATTTGAAATAGCAGTA------AATTTCAGGTTAATGGAAA----TAAAATCATGCTTGTTATTATTGTTCAATTTCTTT-ATTAAGTCTGAAGAAACATTTAATTGAATATGACATCTAAGAGTGAGGGACAAAAGCTTTTTAAATTTTCTTTTCACTCCTTTCTCTGAAAGCTTTGACACAAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6011453 274 + 8656713 CATAGGCATTATT----AAATTCTCACCAATGACTTCAAAAAATATTGTAACTTCTATTTA---------------ACATTTC---------------------TTA-------------------TTTTTAAGCTCAAAAACTC--------------------TAAATTGAGTAGAATTTGAAACAGCAGTA------AATTTTAGGTTAATGGGAA----TAAAATCATGCTTGTTATTATTGTTTAATTTCTTT-ATTAAGTCTGAAGAAACATTTAATTGAATATGACATCTAAGAGTGAGGGACAAGCGCTTTTTAAATTTTCTTTCCACTCCTTTTTCTGAAAGCTTTGACACAGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457124 282 - 190850796 CATAACG-TTATTAAACCAATTCTCACAAATTACCta-aaaaagattttaaattctattta---------------atatttc---------------------ttg-----------------tatttttaatattaaaaaCTC--------------------TAAATTAAGTCAGATTTGAAATAGCAGTAAATATCAATTACAGGTTAATGGAAA----CAAAATCACACTTGTTTTTATTGTACAATTTTTT--ATTAAGTCTGAAGAAACATTTAACTG-AAATGACATTGAGGAATGATGGACAAAGGCTTTTTAAATTTTCTTTCCACTCCTTTTTCTGAAAGTTTTGACACAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6529070 281 - 25294431 CATAAGGATTATCAAACCAATTCTCACCAATTACtta-aaaaatattttaacttctattta---------------atatttc---------------------ttt-----------------ttttttaaatcttaaaaaCTC--------------------TAAATTGAGTAGGATTTGAAATAGCAGTAAATATCAATTACAGGTTAATGGAAA----CAAAATCACACGTGGTTTTATTGTA-ATTTTTTT--ATTAAGTCTGAAGAAATATTTAATTGAAAATGACATTGAGGAATGATGGACAAAAAATTTTTCAATTTTCTTTCCACTCATTTTTCTGAAAGTTTTGATAC--AA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4083796 284 - 6311556 CATAAGCATTATCAAACCCATTCTCACCAATTACTTA-AAAAATATTTTAACTTCTATTTT---------------GTACTTC---------------------TTGTT---------------TTTTTTTAATCTTAAAAACTC--------------------TAAATTGAGTAGGAGTTGAAATAGCAGTAAATATCAATTACAGGTTAATGGAAA----CAAAATCACACTTAGTTTTATTGTACAATTTTTT--ATTAAATCTGAAGAAATATTTAATTGAAAATGACATTGAGGAATGATGGACAAATACTTTTTAAATTTTCTTTCTACTCATTTTTCTGAAAG--TTGACATAAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940351 281 + 15034901 CATAACA-TTGTTAAACCAATTCTCACCAATTACCTA-AAAAAGATTTTAACTTCTATTTA---------------ATATTTC---------------------TTG-----------------CTTTTTCAATCTTAAAAACTC--------------------TAAATTGAATAGGATTTGAAATAGCAGCAAATACCAATTACAGGTTAATGGAAA----CAAAATCACACTTGTTTTTATTGTACAATTTTTT--ATTAAGTCTGAAGAAACATTTAATTG-AAATGACATTGAGGAATGATGGACAAAGGCTTTTTAAATGTTCTTTCCACTCCTTTTTCTGAAAGTTTTGACAT-AAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 963957 299 - 3201129 ----AACATTGTTCAACAAATTCTTGCCAATTTCTACAATTATCATTTTATCCTCTGttta---------------atttttctatttttatttatttttatCATTT-------------------CTTTTACTGTTACAAAGTA--------------------TAAATTGAGTGTGATTTGAAATATTAGTAAATATTCATTTCAGGTGAATAAAAAAAGTAAAAATCAT--TTGTCTTGATTGT---ATTATTTT-ATAAAGCCTGAAGAAGCATTTAAGTGAAAGTAACAGGTAAGAATGATGGGACAATGTTCTTTTAAATTTCTTTCCATTCC-TTCCCTGAAAACTTTGACACAAAA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44063139 316 - 53741614 -TAAGACATTATTCAACAAATTTATGCCAATTACTTCAATGACCATTTTGTTTTCTACTTA---------------ATTTTTC---------------------TTTTTCACATATTCATTTAATGTTTTAGATCTTGAAAAAGCAAATTTTTTTTTTGAAAAAGCAAATTAAACATGATCTGAAATAATGGTAAATATCAATTTCAAGTTAATGAAAA----CAAAATAGCACTTGTTTTAATTGTTAGGATTCTT--ATTAGGCCTGAAGAAATATGTAATTGAAAATAGTGTCTAAAAATGAG----AAACGTTTTTTATTTTTTTCTTTTACTTCTTTTTTTCAAAGCTGC-ATACAAAA i canFam3.chr19 C 0 I 7 s dasNov3.JH569232 1782586 290 + 5974691 ACAAAGCAGTATTCAACAAATTCTTGCCAATTACTTCAAGAACCTTTTTACCTTTTATTTAATTTTCCCCCTTCACATATTTC---------------------TTA---------TTCCCTTATTTTATTAGTCCTA-AACTTT--------------------TACATTCAGAGTGATGTAAAGTAATGACAAATATTAATTTCAGATAAGTGGAAA----TAAAA---CACTT--TTCGATTGTTTTGATTTTTT-ATTAAGCATGAAGAAATAT-TAATTGGGAATAACATCTAAGAATGGCAGCAAAAAGCCTCT--AGTTTTCTTTCAATTCCTTTTCCTG---------ACACAGT- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I a score=21634.000000 s hg38.chr9_KI270719v1_random 62338 13 + 176845 ATCATTTGACACA s panTro5.chr4 135087120 13 + 194502333 ATCATTTGACACA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67472 13 - 70559 ATCATTTGACACA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481849 13 - 115148730 ATCATTTGACCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423420 13 + 190429646 ATCATTTGACACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942428 13 + 189454096 ATCATTTGACACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934224 13 - 40319822 ATTATTTGACACC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488150 13 - 9219162 ATCATTTGACACC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013029 13 + 135778131 ATCATTTGACACC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2782797 13 - 3013352 ATCATTTGACACC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6011727 13 + 8656713 ATCATTTGACACC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457406 8 - 190850796 Cttttgtt----- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6529351 8 - 25294431 CTGAtttt----- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084080 8 - 6311556 GAtttttt----- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940632 8 + 15034901 TGAttttt----- i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44063462 6 - 53741614 GTTGTT------- i canFam3.chr19 I 7 C 0 s dasNov3.JH569232 1782876 9 + 5974691 ----TTCAACACA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 964256 0 - 3201129 C a score=-26897.000000 s hg38.chr9_KI270719v1_random 62351 17 + 176845 AATGA------------------tttt--tttgtgt--------g s panTro5.chr4 135087133 18 + 194502333 AACGA------------------tttt--tttctttt-------c i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67485 17 - 70559 AATGA------------------tttt--ttttttt--------g i gorGor5.CYUI01001450v1 C 0 C 0 s rheMac8.chr5 131423433 45 + 190429646 AATGAAtttttttctttctttctttttttttttttttttttttgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942441 44 + 189454096 AATGATTTTTTTTCtttctttc-tttcttttttttttttttttgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934237 44 - 40319822 AATGATTTTTTTTCtttctttc-tttcttttttttttttttttgg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488163 41 - 9219162 AATGATTTttttt-tttctttc-tttc--tttctttttttttggg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013042 37 + 135778131 AATGA-Tttttt--tttctttc-tttc--tttctttttttt--gg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2782810 40 - 3013352 AATGATTTTTTT--TTTTTTTC-TTtc--tttctttttttttggg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6011740 26 + 8656713 AATGA----------------C-tttt--ttttttttttttttgg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457414 12 - 190850796 -----------------------tttc--tttttct--------g i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6529359 12 - 25294431 -----------------------ttcc--ttttttt--------g i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084088 12 - 6311556 -----------------------ttcc--ttttttt--------g i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940640 12 + 15034901 -----------------------ttct--ttttttt--------g i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44063468 17 - 53741614 ---------------ATTGATA-TCTC--AGTGTT---------- i canFam3.chr19 C 0 I 414 s dasNov3.JH569232 1782885 9 + 5974691 GAAGA------------------TTTC------------------ i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e otoGar3.GL873702 964256 0 - 3201129 C e nomLeu3.chr7b 90481862 0 - 115148730 C a score=138507.000000 s hg38.chr9_KI270719v1_random 62368 20 + 176845 tgacaggatcttactatgtt s panTro5.chr4 135087151 20 + 194502333 tgacaggatcttactatgtt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67502 20 - 70559 tgacaggatcttactatgtt i gorGor5.CYUI01001450v1 C 0 C 0 s rheMac8.chr5 131423478 20 + 190429646 aaacaggatcttactatgtt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942485 20 + 189454096 aaacaggatcttactatgtt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934281 20 - 40319822 aaacaggatcttactatgtt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488204 20 - 9219162 aaacaggatcttactatgtt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013079 20 + 135778131 aaacaggatcttactatgtt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2782850 20 - 3013352 aaacaggatcttactatgtt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6011766 20 + 8656713 aaacaggatcttactatgtt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457426 20 - 190850796 agtcaggatctcgctatgtt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6529371 20 - 25294431 agacagggactcattatgtt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084100 20 - 6311556 agacagggtctcactatgtt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940652 20 + 15034901 agacagggtctcactatgtt i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1782894 4 + 5974691 ----------------TGTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44063485 414 - 53741614 I e otoGar3.GL873702 964256 0 - 3201129 C e nomLeu3.chr7b 90481862 0 - 115148730 C a score=604482.000000 s hg38.chr9_KI270719v1_random 62388 77 + 176845 gcccaggctgaagtgcagtgtgctcatgcaatcctcccatctcagcctcctgagtagctgggactacaggcacatgc s panTro5.chr4 135087171 77 + 194502333 gcccaggctgaagtgcagtgtgctcatgcaatcctcccatctcagcctcctgagtagctgggactacaggcacatgc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67522 77 - 70559 gcccaggctgaagtgcagtgtgctcatgcaatcctcccatctcagcctcctgagtagctgggactacaggcacatgc i gorGor5.CYUI01001450v1 C 0 C 0 s rheMac8.chr5 131423498 77 + 190429646 gcccaggctaaagtgcattgtgctcatgcaatcctcccatctcagcctcctgagtagctgggactacaggcacatgc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942505 77 + 189454096 gcccaggctaaagtgcattgtgctcatgcaatcctcccatctcagcctcctgagtagctgggactacaggcacatgc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934301 77 - 40319822 gcccaggctaaagtgcgttgtgctcatgcaatcctcccatctcagcctcctgagtagctgggactacaggcacatgc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488224 77 - 9219162 gcccaggctaaagtgcagtgtgctcatgcaatcctcccatctcagcctcctgagtagctgggactacaggcacatgc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013099 77 + 135778131 gcccaggctaaagtgcagtgtgctcatccaatcctcccatctcagtctcctgagtagctgggactacaggcacatgc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2782870 77 - 3013352 gcccaggctaaagtgcagtgtgctcatgcaatcctcccatctcagcctcctgagtagctgggactacaggcacatgc i manLeu1.NW_012103277v1 C 0 I 6163 s colAng1.NW_012114544v1 6011786 77 + 8656713 gcccaggctgaagtgcagtgtgctcatgctatcctcctatctcagcctcctgagtagctgggactacaggcacatgc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457446 77 - 190850796 gcccaggctgaagtgcagtgtgctcaagcaatcctcccatctcagcctcctgagttgctgggactacagacacttga i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6529391 77 - 25294431 gcccaagctgaagtgcagtgtgctcaagcaatcctcccatctcagcctcctgattagctgggactacaggtgtgtgt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084120 77 - 6311556 gcccaggctggattgcagtgtgctcaagcaatcctcccatctcagcctcctgagtagctgagactacaggcatgtgc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940672 77 + 15034901 gcccaggctgaagtgcagtgtgctcaagcaatcctcccatctcagcctcctgagtagctgggactacaggcgtgtgg i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1782898 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44063485 414 - 53741614 I e otoGar3.GL873702 964256 0 - 3201129 C e nomLeu3.chr7b 90481862 0 - 115148730 C a score=86670.000000 s hg38.chr9_KI270719v1_random 62465 14 + 176845 cgccatgcccagct s panTro5.chr4 135087248 14 + 194502333 cgccatgcccagct i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67599 14 - 70559 cgccatgcccagct i gorGor5.CYUI01001450v1 C 0 C 0 s rheMac8.chr5 131423575 14 + 190429646 tgccatgcccagct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942582 14 + 189454096 cgccatgcccagct i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934378 14 - 40319822 cgccatgcccagct i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488301 14 - 9219162 cgccatgcccagct i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013176 14 + 135778131 cgccatgcccagct i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6011863 14 + 8656713 cgccatgcccagct i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457523 14 - 190850796 caccatggctggct i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6529468 14 - 25294431 caccatgcctggct i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084197 14 - 6311556 caccatgcctggct i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940749 14 + 15034901 caccatgcctggtt i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1782898 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44063485 414 - 53741614 I e otoGar3.GL873702 964256 0 - 3201129 C e manLeu1.NW_012103277v1 2782947 6163 - 3013352 I e nomLeu3.chr7b 90481862 0 - 115148730 C a score=80109.000000 s hg38.chr9_KI270719v1_random 62479 9 + 176845 aatttttgt s panTro5.chr4 135087262 9 + 194502333 aatttttgt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67613 9 - 70559 aatttttgt i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481862 9 - 115148730 aatttttgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423589 9 + 190429646 aatttttgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942596 9 + 189454096 aatttttgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934392 9 - 40319822 aatttttgt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488315 9 - 9219162 aatttttgt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013190 9 + 135778131 aatttttgt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6011877 9 + 8656713 aatttttgt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457537 9 - 190850796 aatttttat i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6529482 9 - 25294431 aatttttgt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084211 9 - 6311556 aatttttat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940763 9 + 15034901 aatttttgt i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 964256 9 - 3201129 GATTTCTGT i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1782898 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44063485 414 - 53741614 I e manLeu1.NW_012103277v1 2782947 6163 - 3013352 I a score=490476.000000 s hg38.chr9_KI270719v1_random 62488 72 + 176845 atctttagtagaaacaagattttgccacattgcccaggctggtctccaactcgtgggctgaagtgatctgcc s panTro5.chr4 135087271 72 + 194502333 atctttagtagaaacaaggttttgccacattgcccaggctggtctccaactcgtgggctgaagtgatctgcc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67622 72 - 70559 atctttagtagaaacaagattttgccacattgcccaggctggtctccaactcatgggctgaagtgatctgcc i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481871 72 - 115148730 atctttagtagaaacaaagttttgccacattgcccaggctggtctccaactcatgggctgaagtgatctgcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423598 72 + 190429646 atctttagtagaaacaaggttttgccacattgcccaggctggtctccaactcgtgggctgaagtgatatgcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942605 72 + 189454096 atctttagtagaaacaaggttttgccacattgcccaggctggtctccaactcgtgggctgaagtgatatgcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934401 72 - 40319822 atctttagtagaaacaaggttttgccacattgaccaggctggtctccaactcgtgggctgaagtgatatgcc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488324 72 - 9219162 atctttagtagaaacaaggttttgccacattgcccaggctggtctccaactcgtgggctgaagtgacatgcc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013199 72 + 135778131 atctttagtagaaacaaggttttgccacattgcccaggctggtctccaactcgtgggctgaagtgatatgcc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6011886 69 + 8656713 atcttcagtagaaacaaggttttgccacattgcccaggctggtctccaactcgtgggctgaagtgatat--- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457546 65 - 190850796 atctttagtagaaacaaggtttttccacactgaccag-------cccaattcatacagtgaagtgatctgtc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6529491 65 - 25294431 atctttagtagaaacaagattttgccacattgcccag-------cccaattcatgggctgaagtgatctgtc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084220 65 - 6311556 acctttagtagaaacaagattttgccacattgcccag-------cccaactaatgggctgaagtgatctgtc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940772 65 + 15034901 atctttagtagaaacaaggttttgccacactgaccag-------cccgactcatggactgaagtgatctgtc i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1782898 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44063485 414 - 53741614 I e otoGar3.GL873702 964265 0 - 3201129 C e manLeu1.NW_012103277v1 2782947 6163 - 3013352 I a score=113235.000000 s hg38.chr9_KI270719v1_random 62560 15 + 176845 caccttggcctccca s panTro5.chr4 135087343 15 + 194502333 caccttggcctccca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67694 15 - 70559 caccttggcctccca i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481943 15 - 115148730 caccttggcctccca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423670 15 + 190429646 caccttggcctccca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942677 15 + 189454096 caccttggcctccca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934473 15 - 40319822 caccttggcctccca i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488396 15 - 9219162 caccttggcctccca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013271 15 + 135778131 caccttggcctccca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789110 15 - 3013352 caccttggcctccca i manLeu1.NW_012103277v1 I 6163 C 0 s colAng1.NW_012114544v1 6011955 8 + 8656713 -------gcctccca i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129457611 15 - 190850796 catatcagcctccca i calJac3.chr3 C 0 M 848 s saiBol1.JH378129 6529556 15 - 25294431 catatcagcctccca i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084285 15 - 6311556 catatcagcctccca i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940837 15 + 15034901 catatcaggctccca i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1782898 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44063485 414 - 53741614 I e otoGar3.GL873702 964265 0 - 3201129 C a score=375942.000000 s hg38.chr9_KI270719v1_random 62575 54 + 176845 gtgttctgggattacaggagtgagc----cactgtacccggcTGATGCAAATGATTTC s panTro5.chr4 135087358 54 + 194502333 gtgttctgggattacaggagccagc----cactgtacccggcTGATGCAAATGATTTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67709 54 - 70559 gtgttctgggattacaggagtgagc----cactgtacccggcTGATGCAAATGATTTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90481958 54 - 115148730 gtgttctgggattacaggagtgagc----cactgtacccggcTGACGCAAAAGATTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423685 54 + 190429646 gtgtgttgggattacaggagtgaac----cactgtacccagcTGACGCAAATGGTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942692 54 + 189454096 gtgtgttgggattacaggagtgaac----cactgtacccagcTGACGCAAATGGTTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934488 54 - 40319822 gtgtgttgggattacaggagtgaac----cactgtacccagcTGACGCAAATGGTTTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488411 54 - 9219162 gtgtgttgggattacaggaatgaac----cactgtacccagcTGACGCAAATGGTTTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013286 54 + 135778131 atgtgttgggattacaggggtgaac----cactgtacccggcTGACCCAAATGGTTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789125 54 - 3013352 gtgtgttgggattacaggaatgaac----cactgtacccagcTGACGCAAATGGTTTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6011963 54 + 8656713 gtgtgttgggattacaggagtgaac----cagtgtacccggcTGATGCAAATGATTTC i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6529571 54 - 25294431 gtgtgcagagattacaggagtgagc----cactgtacctggcTGTCACAAATGATTTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084300 58 - 6311556 gtgtgcatggattacaggagtgagccacTCACTGTACCTGGCTCTCACAAATGATTTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940852 54 + 15034901 gtgtgcagggattacaggagtgagc----cactgtacctggcTGTCACAAATGATTTC i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1782898 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44063485 414 - 53741614 I e otoGar3.GL873702 964265 0 - 3201129 C e calJac3.chr3 129457626 848 - 190850796 M a score=17402.000000 s hg38.chr9_KI270719v1_random 62629 2 + 176845 TA s panTro5.chr4 135087412 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67763 2 - 70559 TA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482012 2 - 115148730 TA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423739 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942746 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934542 2 - 40319822 TA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488465 2 - 9219162 TA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013340 2 + 135778131 TA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789179 2 - 3013352 TA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012017 2 + 8656713 TA i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6529625 2 - 25294431 TA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084358 2 - 6311556 TA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940906 2 + 15034901 TA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 964265 2 - 3201129 TG i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1782898 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44063485 414 - 53741614 I e calJac3.chr3 129457626 848 - 190850796 M a score=1446713.000000 s hg38.chr9_KI270719v1_random 62631 206 + 176845 TTATTAATATCTTGCAGTTATTCTTCCATCAGATAACCATCAATGTCAAAATAAAGATTATTAATTAC-TGAAGGACTGAAAAATCAAAAATCAACTTCATGAGATGCTTT-ACAAACAAGTGATC-TCTTTTAATATTTGACTCAGTAAAA-------TTTTTTAAGAAAAGTTAAG-TT---------TG------------TGTTTTTA--TT--TGTGTATACTC-TCTAGTGCTTAAA s panTro5.chr4 135087414 208 + 194502333 TTATTAATATCTTGCAGCTATTCTTCCATCAGATAACCATCAAAGTCAAAATAAAGATTATTAGTTAC-TGAAGGACTGAAAAATGAAAAATCATCTTCATCAGATGCTTT-ACAAACAAATGTTC-TCTTTTAATATTTGACTCAGTAAAAG------TTTTTTAAGAAAAGT-AAG-TT---------TG------------TGTTTTTA--TTGGTGTATATAGTC-TCCAGTGCTTAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67765 205 - 70559 TTATTAATATCTTGCAGTTATTCTTCCATCAGATAACCATCAATGTCAAAATAAAGATTATTAGTTAC-TGAAGGACTGAAAAATCAAAAATCAACTTCATGAGATGCTTT-ACAAACAAGTGTTC-TCTTTTAATA-TTGACTCAGTAAAAG------TTTTTTAAGAAAAGT-AAG-TT---------TG------------TGTTTTTA--TT--TGTGTATACTC-TCTAGTGCTTAAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482014 206 - 115148730 TTATTAATATCTTGCAGTTATTCTTCCATCAGATAACCATCAATGTGAAGATAAAGATTATTAGTTAC-TGAAGGACTGAAAAATCAAAAATCATCTTCATGAGGTGCTTT-ACAAACAAGTGCTC-TCTTTTAATATTTGACTCAGTAAAAG------TTTTTTAAGAAAAAT-AAG-TT---------TC------------TGTTTTTA--TT--TGTGTATACTC-TCTAGTGCTTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423741 203 + 190429646 TTATTCATATCTAGCAGTTATTCTTCCATCAGATAGCCGTCTATGTCAAAATAAAGATTATTAGTTAC-TGAAAGACTGAAAAATCAAAAACCATCTTTAT--GGTGCTGT-AC-AACAAGTGTTC-TTTTTTAATATTTGACTCAGTAAAAG------TTTTTTAAGAAAAAT-AAG-TT---------TG------------TGTTTTTA--TT--TGTGTATACTC-TTTAGTGCTTACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942748 203 + 189454096 TTATTCATATCTAGCAGTTATTCTTCCATCAGATAGCCGTCTATGTCAAAATAAAGATTATTAGTTAC-TGAAAGACTGAAAAATCAAAAACCATCTTTAT--GGTGCTGT-AC-AACAAGTGTTC-TCTTTTAATATTTGACTCAGTAAAAG------TTTTTTAAGAAAAAT-AAG-TT---------TG------------TGTTTTTA--TT--TGTGTATACTC-TCTAGTGCTTACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934544 203 - 40319822 TTATTCATATCTAGCAGTTATTCTTCCATCAGATAGCCGTCTATGTCAAAATAAAGATTATTAGTTAC-TGAAAGACTGAAAAATCAAAAACCATCTTTAT--GGTGCTGT-AC-AACAAGTGTTC-TCTTTTAATATTTGACTCAGTAAAAG------TTTTTTAAGAAAAAT-AAG-TT---------TG------------TGTTTTTA--TT--TGTGTATACTC-TCTAGTGCTTACA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488467 203 - 9219162 TTATTCATATCTAGCAGTTATTCTTCCATCAGATAGCCGTCTATGTCAAAATAAAGATTATTAGTTAC-TGAAAGACTGAAAAATCAAAAACCATCTTTAT--GGTGCTGT-AC-AACAAGTGTTC-TCTTTTAATATTTGACTCAGTAAAAG------TTTTTTAAGAAAAAT-AAG-TT---------TG------------TGTTTTTA--TT--TGTGTATACTC-TCTAGTGCTTACA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013342 204 + 135778131 TTATTCATATCTAGCAGTTATTCTTCCATCAGATAGCCATCTATGTCAAAATAAAGATTATTAGATAC-TGAAAGACTGAAAAATCAAAAACCATCTTTATGAGGTGCTGT-AC-AACAAGTGTTC-TCTTTTAATATTTGACTCAGTAAAAG------TTTTTTAAG-AAAAT-AAG-TT---------TG------------TGTTTTTA--TT--TGTGTATACCC-TCTAGTGCTTACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789181 203 - 3013352 TTATTCATATCTAGCAGTTATTCTTCCATCAGATAGCCGTCTATGTCAAAATAAAGATTATTAGTTAC-TGAAAGACTGAAAAATCAAAAACCATCTTCAT--GGTGCTGT-AC-AACAAGTGTTC-TCTTTTAATATTTGACACAGTAAAAG------TTTTTTAAGAAAAAT-AAG-TT---------TG------------TGTTTTTA--TT--TGTGTATACTC-TCTAGTGCTTACA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012019 201 + 8656713 TTATTAATATCTAGCAGTTATTCTTCCATCAGATAGCCGTCTATGTCAAAATAAAGATTATTAGTCAC-TGAAGGACTGAAAAATCAAAAATCATCTTTATGAGGTGCTGT-AC-AACAAGTGTTC-TCTTTTAATATTTGACTCAGTAAAAG------TTTTTTAAGAAAAAT-AAG-TT---------CG------------TGAT------TT--TGTGTATACTC-TCTAGTGCTTACA i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6529627 191 - 25294431 TTATTAATATCTAGCTGTTATTTTTCCATCAGTTAACCAACTATGTAAAAATAAAGATTATTAGTTACTTGAAGAATT-------TTTCAATTGTATTTTTGAGGTGTTTT-ACAAACAAGTGTTC-TCTTTTAACATTTGACTCAGCAATTT------TTTTTAAAG-----T-GAG-TT---------T----------------TGTTA--TT--TGTGTATACTC-TCTAGTTCTTACA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084360 198 - 6311556 TTATTAATATCTAGCTGTTATTTTTCCATCAGTTAACCAACTATGTAAAAATAAAGATTATTAGTTACTTGAAGGATTGAAAAACCAAAAATCATATTTATGAGGTGCTTT-ACAAACAAGTGTTC-TCTTTTAATATTTGACTCAGCAATTT------TTTTTAAAG-----T-AAG-TT---------T----------------TTTTG--TG--TGTGTATACCC-TCTAGTGCTTACA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14940908 199 + 15034901 TTATTAATATCTAGCTGTTATTTTTCCATCAGTTAACCAACTATGTAAAAATAAATATTATTAATTACTTGAAGGGTTGAAAACCCAAAAATCATATTTATGAGGTGCTTT-ACAAACAAGTGTTC-TCTTTTAATATTTGACTCAGTAAATT------TTTTTTAAG-----T-AAGTTT---------T----------------TTTTA--TT--TGTGTATACTC-TCCAGTGCTTACA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 964267 211 - 3201129 CTATTAATATCTAACTTGT-TTCTGCCATCAGTTAA-CAGGTAGGTCAAAGTTAA-AGTATTGATAAC-TGAAAGACTGAAAAATCAAAGATCATGTCTAAAAAGTACTTTCATAAACAAATG-TC-ATTTCTATTATTTGATTCAGTAAATA------TTTTGTAAAGAACAT-AAT-TTAACTTATTATT------------TGTTTTTA--TT--CATGTATATTC--CCAGTGTTTAAA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1782898 228 + 5974691 TTATTAATATCTAGCAGTTATTATTCCATCTGTTAACCTGCTATGTCAAATGGATGATTATTGGTAAC-TAAAGGGTAGAAAAATCAAAGATTGTCCCTTTT-GATACTTTTACAAATGAATGTTCATTTTTTAAACATTTACTCTGCAAATATGTGTTTTTATTAAAAGATAA-AAT-TT---------TACACATTTGTGTTTGCTTTTAATTT--TGTTTATACTCAATTAATGTTTAAC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e canFam3.chr19 44063485 414 - 53741614 I e calJac3.chr3 129457626 848 - 190850796 M a score=107421.000000 s hg38.chr9_KI270719v1_random 62837 11 + 176845 TGTATCAGGAT s panTro5.chr4 135087622 11 + 194502333 TTTATCAGGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67970 11 - 70559 TGTATCAGGAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482220 11 - 115148730 TTTATCAGGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423944 11 + 190429646 TTTATCAGGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942951 11 + 189454096 TTTATCAGGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934747 11 - 40319822 TTTATCAGGAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488670 11 - 9219162 TTTATCAGGAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013546 11 + 135778131 TTTATCAGGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789384 11 - 3013352 TTTATCAGGAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012220 11 + 8656713 TTTATCAGGAT i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6529818 11 - 25294431 TTTATCAGGAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084558 11 - 6311556 TTTATCAGGAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941107 11 + 15034901 TTTATCAGGAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 964478 11 - 3201129 CTTATCAGGAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44063899 11 - 53741614 TTTTTAAAGAG i canFam3.chr19 I 414 C 0 s dasNov3.JH569232 1783126 10 + 5974691 TTTATCAAAA- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 246129 7432 - 1108378 I e calJac3.chr3 129457626 848 - 190850796 M a score=26996.000000 s hg38.chr9_KI270719v1_random 62848 2 + 176845 AG s panTro5.chr4 135087633 2 + 194502333 AG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67981 2 - 70559 AG i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482231 2 - 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423955 2 + 190429646 AG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942962 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934758 2 - 40319822 AG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488681 2 - 9219162 AG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013557 2 + 135778131 AG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789395 2 - 3013352 AG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012231 2 + 8656713 AG i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6529829 2 - 25294431 AG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084569 2 - 6311556 AG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941118 2 + 15034901 AG i aotNan1.NW_018507635v1 C 0 C 0 s tarSyr2.KE944182v1 253561 2 - 1108378 AG i tarSyr2.KE944182v1 I 7432 I 9 s otoGar3.GL873702 964489 2 - 3201129 AA i otoGar3.GL873702 C 0 I 3 s canFam3.chr19 44063910 2 - 53741614 AG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1783136 2 + 5974691 AG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e calJac3.chr3 129457626 848 - 190850796 M a score=6984.000000 s hg38.chr9_KI270719v1_random 62850 7 + 176845 AA-------CTTTT s panTro5.chr4 135087635 7 + 194502333 AA-------CTTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67983 7 - 70559 AA-------CTTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482233 7 - 115148730 AA-------CATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423957 7 + 190429646 AA-------CTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942964 7 + 189454096 AA-------CTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934760 7 - 40319822 AA-------CTTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488683 7 - 9219162 AA-------CTGTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013559 7 + 135778131 AA-------CTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789397 7 - 3013352 AA-------CTGTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012233 7 + 8656713 AA-------TTTTT i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6529831 12 - 25294431 AAAT--TTTCTCTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084571 12 - 6311556 AAAT--TTTCTCTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941120 12 + 15034901 AAAT--TTTCTCTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 964494 7 - 3201129 AA-------ATCTT i otoGar3.GL873702 I 3 I 4 s canFam3.chr19 44063912 6 - 53741614 AA-------TTTT- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1783138 12 + 5974691 --ATAATTACTATT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253563 9 - 1108378 I e calJac3.chr3 129457626 848 - 190850796 M a score=11475.000000 s hg38.chr9_KI270719v1_random 62857 1 + 176845 C s panTro5.chr4 135087642 1 + 194502333 C i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67990 1 - 70559 C i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482240 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423964 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942971 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934767 1 - 40319822 C i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488690 1 - 9219162 G i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013566 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789404 1 - 3013352 C i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012240 1 + 8656713 C i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6529843 1 - 25294431 C i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084583 1 - 6311556 C i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941132 1 + 15034901 C i aotNan1.NW_018507635v1 C 0 C 0 s tarSyr2.KE944182v1 253572 1 - 1108378 C i tarSyr2.KE944182v1 I 9 I 2124 s otoGar3.GL873702 964505 1 - 3201129 C i otoGar3.GL873702 I 4 C 0 s canFam3.chr19 44063918 1 - 53741614 C i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1783150 1 + 5974691 C i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e calJac3.chr3 129457626 848 - 190850796 M a score=1804695.000000 s hg38.chr9_KI270719v1_random 62858 200 + 176845 TAAACTAGGTCAGTCTTTTTTCTATATCTATGGTTGAATACTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGTTATAATTGGCAT-TTT-GGGCACTTGCTGCAATTAATTGCCAAAAAAAGCATGTCTCACCACAATTGATCTCTCATTTTTCCACTCTCATTTATTTCCCTTCACTTTCTTCTTGGCTTCTGCA s panTro5.chr4 135087643 200 + 194502333 TAAACTAGGTTAGTCTTTTTTCCATATCTATGGTTGAACACTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGTTATAATTGGCAT-TTT-GGGCACTTGTTGCAATTAATTGCCAAAAAAAGCATATCTCACTACAATTGAGCTCTCATTTTTCCACTCTCATTTATTTCCCTTCACTTTCTTCTTGGCTTCTGCA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 67991 200 - 70559 TAAACTAGGTCAGTCTTTTTTCCATATCTATGGTTGAATACTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGTTATAATTGGCAT-TTT-GGGCACTTGTTGCAATTAATTGCCAAAAAAAGCATATCTCACCACAATTGATCTCTCATTTTTCCACTCTCATTTATTTCCCTTCACTTTCTTCTTGGCTTCTGCA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482241 200 - 115148730 TAAACTAGGTCGGTCTTTTTTCCATATCTATGATTGAATACTTCAGTTAAATAAAGCAATTGTAGAT-A-GCAAACTA-TGTTATAATTGGCAT-TTT-GGGCACTTGTTGCAATTAATTGCCAAAAAAAGCATATCTCACCACAATTGATCTCTCATTTTTCCACTCTCGTTTATTTCCCTTCACTTTTTTCTCGGCTTCTGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131423965 200 + 190429646 TAAACTAGGTCAGTCTTTTTCCCATATCTATGATTGAATACTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGGTATAATTGGCAT-TTT-GGGCACTTGTTGCAATTAATTGCCAAAAAAAGCATATCTCACCGCAATTGATCTCTCATTTTTCCACTCTAGTTTATTTCCCTTCACTTTTTTCTTGGCTTCTGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130942972 200 + 189454096 TAAACTAGGTCAGTCTTTTTCCCATATCTATGATTGAATACTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGGTATAATTGGCAT-TTT-GGGCACTTGTTGCAATTAATTGCCAAAAAAAGCATATCTCACCGCAATTGATCTCTCATTTTTCCACTCTAGTTTATTTCCCTTCACTTTTTTCTTGGCTTCTGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934768 200 - 40319822 TAAACTAGGTCAGTCTTTTTCCCATATCTATGATTGAATATTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGGTATAATTGGCAT-TTT-GGGCACTTGTTGCAATTAATTGCCAAAAAAAGCATATCTCACCGCAACTGATCTCTCATTTTTCCACTCTAGTTTATTTCCCTTCACTTTTTTCTTGGCTTCTGCa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488691 200 - 9219162 TAAACTAGGTCAGTCTTTTTCCCATATCTATGATTGAATACTTCAGTTAAATAAAGTAATGGTAGAT-A-GCAAATTA-TGGTATAATTGGCAT-TTT-GGGCACTTGTTGCAATTAATTGCCAAAAAAAGCATATCTCACTACAATTGATCTCTCATTTTTCCACTCTAGTTTATTTCCCTTCACTTTTTTCTTGGCTTCCGCA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013567 199 + 135778131 TAAACTAGGTCAGTCTTTTGCCCATATCTATGATTGAATACTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGGTATAATTGGCAT-TTT-GGGCACTTGTTGCAATTAATTGCC-ATAAAAGCATATCTCACCGCAATTGATCTCTCATTTTTCCACTCTAGTTTATTTCCCTTCACTTTTTTCTTGGCTTCTACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789405 200 - 3013352 TAAACTAGGTCAGTCTTTTTCCCATATCTATGATTGAATACTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGATATAATTGGCAT-TTG-GGGCACTTGTTGCAATTAATTGCCAAAAAAAGCATATCTCACCGCAATTGATTTCTCATTTTTCCACTCTAGTTTATTTCCCTTCACTTTTTTCTTGGCTTCTGCA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012241 195 + 8656713 TAAACTAGGTCAATCTTTTTCCCATATCTATGATTGAATACTTCAGTTAAATAAAGCAAT----GAT-A-GCAAACTA-TGGTATACTTGGCAT-TTT-GGGCGCTTGTTGCAATTAATTGCCAAAAAAAGCATATCTCACCGCAATTGATCTCTCATTTTCCCACTCTAGTTTATTT-CCTTCACTTTTTTCTTGGCTTCTGCA i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6529844 197 - 25294431 TAAACCAGATCAGTCTTTTTACCATACCTATGATTGAATACTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGGTCTAATTGGCAT-TGT-GGGTACTTGCTGCAATTAATCAAC-ATAAAAGCA--TCTCACCACAGTTTATCTCTTATTTTTCCACTCTAATTTATTTTTCTTCACTTTTTCCTTGGCTTCTGCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084584 199 - 6311556 TAAACCATGTCAGTCTTTTTACCATATCTATGATTGAATACTTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGGTCTAATTGGCAT-TTG-GGGCACTTGTTGCAATTAATTGCT-ATAAAAGCATGTCTCGCCACAGTTTGTCTCTCATTTTTCCACTCTAATTTATTTTTCTTCACTTTTTTCTTGGCTTCTGCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941133 199 + 15034901 TAAACTAGGTCAGTCTTTTTACCATATCTGTGATTGAATAATTCAGTTAAATAAAGCAATGGTAGAT-A-GCAAACTA-TGGTCTAATTGGCAT-TTT-GGGCACTTGTTGCAATTAATTGCC-ATAAAAGCATATCTCACCACAGTTTGTCTCTCATTTTTCCACTCTAATTTACTTTCCTTCACTTTTTTCTTGGCTTCTGCA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 964506 188 - 3201129 TAAACTAAGTCAAGTTTTT---CGTATCT----TTGATTATTTTATTCTAATAAAGTAATAG----T-A-GTAACCTG-TGGTATGCTCAGCAC-TTTGGGGCACTTGGTGCAATTAATTGCC-AAAAACGTATACCCCACAACAACTGGTCTCTAATTTTTCTGCTACAATTTAGTCTTCTCTAC-CTATTATAAGTTTCTGCT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44063919 193 - 53741614 TAAACAAAGTCAGACTTTT--CCACATCT-TGAAAGAGTACATTAGTCAAATAAAACAATGGTAAATGA-GCAAACTCTTGGTATAATTTCCACATTT-GGGTACTTAATGCAATTAAGTGATAAAGAAGGCAGGACCCCATCCCATTGGTCTCTCATTTTCCCACTTTACTT-------CTCTGCTTTTTCCTTGACTTCTGGT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1783151 192 + 5974691 TAAAC-AAGTCAGG--TTTTCTCACAACTTTGACAGAAT-----AGTCAAATAAAATAATGGTAGAC-AGGCAAACTA-TGGTGCAATTGGCACATTT-GGGCAATTGAGGCAATTAATTGCT-AAAAATGAATCCTTCATCA-AATCAGTCTCTCATTCTTCCACTTAACTTTTTCTCTCTCTGCTTTTCTCTTGACTCCTgct i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e calJac3.chr3 129457626 848 - 190850796 M a score=27846.000000 s hg38.chr9_KI270719v1_random 63058 2 + 176845 AA s panTro5.chr4 135087843 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 68191 2 - 70559 AA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482441 2 - 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131424165 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130943172 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34934968 2 - 40319822 aa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4488891 2 - 9219162 AA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013766 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789605 2 - 3013352 AA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012436 2 + 8656713 AA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129458474 2 - 190850796 AA i calJac3.chr3 M 848 C 0 s saiBol1.JH378129 6530041 2 - 25294431 AA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084783 2 - 6311556 AA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941332 2 + 15034901 AA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 964694 2 - 3201129 AA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44064112 2 - 53741614 AA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1783343 2 + 5974691 aa i dasNov3.JH569232 C 0 I 19 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I a score=75511.000000 s hg38.chr9_KI270719v1_random 63060 13 + 176845 AGCATTTGTTTTT s panTro5.chr4 135087845 13 + 194502333 AGCATTTGTTTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 68193 13 - 70559 AGCATTTGTTTTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482443 13 - 115148730 AGCATTTGTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131424167 13 + 190429646 AGTATTTGTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130943174 13 + 189454096 AGTATTTGTTTTT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4488893 13 - 9219162 AGTATTTGTTTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013768 13 + 135778131 AGTATTTGTTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789607 13 - 3013352 AGTATTTGTTTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012438 13 + 8656713 AGTATTTGTTTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129458476 13 - 190850796 AATAATTGTTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530043 12 - 25294431 AACATTTGTTT-A i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084785 12 - 6311556 AACATTTGTTT-A i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941334 12 + 15034901 AACATTTGTTT-A i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 964696 13 - 3201129 AATATCCAGTTTT i otoGar3.GL873702 C 0 I 15 s canFam3.chr19 44064114 13 - 53741614 AATATTCAGTCTT i canFam3.chr19 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1783345 19 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e macNem1.NW_012010911v1 34934970 0 - 40319822 C a score=21797.000000 s hg38.chr9_KI270719v1_random 63073 4 + 176845 CCTT s panTro5.chr4 135087858 4 + 194502333 CCTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 68206 4 - 70559 CCTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482456 4 - 115148730 CCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131424180 4 + 190429646 CCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130943187 4 + 189454096 CCTT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4488906 4 - 9219162 CCTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79013781 4 + 135778131 CCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789620 4 - 3013352 CCTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6012451 4 + 8656713 CCTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129458489 4 - 190850796 TTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530055 4 - 25294431 TCCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084797 4 - 6311556 ACCT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941346 4 + 15034901 TCCT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44064127 4 - 53741614 ATTT i canFam3.chr19 C 0 I 3 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1783345 19 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e otoGar3.GL873702 964709 15 - 3201129 I e macNem1.NW_012010911v1 34934970 0 - 40319822 C a score=127956.000000 s hg38.chr9_KI270719v1_random 63077 21 + 176845 TTTCTTTCTTCTT-------TAAAAAA-A s panTro5.chr4 135087862 21 + 194502333 TTTCTTTCTTCTT-------TAAAAAA-A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 68210 21 - 70559 TTTCTTTCTTCTT-------TAAAAAA-A i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482460 22 - 115148730 TTTCTTTCTTCTT-------TAAAAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131424184 21 + 190429646 TTTCTTTCTTCTT-------aaaaaaa-a i rheMac8.chr5 C 0 I 3 s macFas5.chr5 130943191 21 + 189454096 TTTCTTTCTTCTT-------aaaaaaa-a i macFas5.chr5 C 0 I 3 s macNem1.NW_012010911v1 34934970 8 - 40319822 --------------------aaaaaaa-a i macNem1.NW_012010911v1 C 0 I 3 s cerAty1.NW_012000798v1 4488910 28 - 9219162 TTTCTTTCTTCTTaaaaaaaaaaaaaa-a i cerAty1.NW_012000798v1 C 0 I 3 s chlSab2.chr7 79013785 21 + 135778131 TTTCTTTCTTCTT-------aaaaaaa-a i chlSab2.chr7 C 0 I 8 s manLeu1.NW_012103277v1 2789624 21 - 3013352 TTTCTTTCTTCTT-------AAAAAAA-A i manLeu1.NW_012103277v1 C 0 T 5408 s colAng1.NW_012114544v1 6012455 20 + 8656713 TTT-TTTCTTCTT-------AAAAAAA-a i colAng1.NW_012114544v1 C 0 I 1 s calJac3.chr3 129458493 20 - 190850796 TTACTTTCTTctt-------tgaaaaa-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530059 21 - 25294431 TTACTTTCTTCTT-------TAAAaaa-a i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084801 21 - 6311556 TTAATTTCTTCTT-------TAAAaaa-a i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941350 21 + 15034901 TTACTTTCTTctt-------taaaaaa-a i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1783345 19 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e canFam3.chr19 44064131 3 - 53741614 I e otoGar3.GL873702 964709 15 - 3201129 I a score=3448471.000000 s hg38.chr9_KI270719v1_random 63098 520 + 176845 Tatatttgaagagatttactctaagccaaatatgagtcaccatggccagtgacacagcattcaggaggtcctgagaacatgtgcccaaggtggttgggaggcagcttgcttttatacattttagagaggcatgagacatcaagtaactacacttgagaaatacatcagtttgatccagaaaggtgggacaactcaaagcagagggagt-gggggtgggaggggttgggggtggcag--gggggtt---gggggatgggagggta---------ttggggtttgggggttggttccaggctataggtgaatttaaacattttc----tggttgataattggttgagtttgtttcaagacctgggattgatagaaagggaatgttcaggttaagataaaagattgtggagaccaaggttcttttg--------aagtcataacagtggctgccgttagagacaataaatgacaactgtttcctattcagatctttaaaaggtactagacttttagttaatctctttaggactgggagggccG-TTTTTAC s panTro5.chr4 135087883 518 + 194502333 Tatatttgaagagatttattctaagccaaatgtgagtaaccatggccagtgacacagcactcaggaggtcctgagaacatgtgcccaaggtggttgggatgcagcttgcttttatacattttagagaggcatgagacatcaattaactacacttaagaaatacatcagtttgatccagaaaggtgg-acaactcaaagcagagggagt-gggggtgggaggggttgggggtggcag--gggggtt---gggggatgggagggta---------ttggggtttgggggttggttccaggctataggtgaatttaaacattttc----tggttgataattggttgagtttgtttcaagacctgggattgatagaaagggaatgttcaggttaagataaaagattgtggagaccaaggttcttttg--------aagtctta-cagtggctgcccttagagataataaatgacaagtgtttcctattcagatctttaaaaggtactagacttttagttaatctctttaggaccgggagggccG-TTTTTTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 68231 518 - 70559 Tatatttgaagagatttattctaagccaaatatgagtaaccatggccagtgacacagcactcaggaggtcctgagaacatgtgcccaaggtggttgggatgcagcttgcttttatacattttagagaggcatgagacatcaattaactacacttaagaaatacatcagtttgatccagaaaggtgggacaactcaaagcagagggagt-gggggtgggaggggtt-ggggtggcag--gggggtt---gggggatgggagggta---------ttggggtttgggggttggttccaggctataggtgaatttaaacattttc----tggttgataattggttgagtttgtttcaagacctgggattgatagaaagggaatgttcaggttaagataaaagattgtggagaccaaggttcttttg--------aagtctta-cagtggctgcccttagagacaataaatgacaagtgtttcctattcagatctttaaaaggtactagacttttagttaatctctttaggactgggagggccG-TTTTTTC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90482482 519 - 115148730 TGtatttgaagagatttattctaagccaaatacgagtgaccatggccagtgacacagcactcaggaggtcctgagaacatgtgcccaaggtggttgggatgcagcttaattttatacattttagagaggcatgagacatcaattagatacacttaagaaatagatgagttcgatccagaaaggcaggacaactcaaagcagagggagt-gggagtgggaggggttgggggtggcag--ggggatt---gggggatggaagggta---------ctggggtttgggggttggttccaggctataggtaaatttaaacattttc----tggttgataattggttgagtttgtttcaagacctgggattgatagaaagggaatgttcaggttaagataaaagattgtggagaccaaggttcttttg--------aagtctta-cagtggctgcccttagagacaataaatgacaagtgtttcctattcagatctttaaaaggtactagacttttagttaatctctttaggattgggagggccG-TTTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131424208 523 + 190429646 aaaaaaGgaagagatttattctaagccaaatatgagtgaccatagccagtgacacagccctcaggaggtcctgagaacgtgtgcccaaggtcatcgggatgcagcttgcttttatacattttagagaggcatgcgacatcaatcaaatacacttaagaaatacatgggattgatccagaaaggtgggacaactcaaagcagagggagt-gggggtgggagaggttgggagtagcagaggggggtt---gggggatgggtgggta---------ttggagtttgggggttgattccaggctataggtgaatttaaacatttttt---ttgttgataattggttaagtttgtttcaagacctgggattgatagaaagggaatgttcaggttaagatagaagattgtggagaccaaggttcttttg--------aagtctta-tagtggttgcccttagagaaaataaatgacaaatgtttactattcagatttttaaaaggtactagacttttagttaatctctttaggactgggagggccATTTTTTTC i rheMac8.chr5 I 3 C 0 s macFas5.chr5 130943215 523 + 189454096 aaaaaaGgaagagatttattctaagccaaatatgagtgaccatagccagtgacacagccctcaggaggtcctgagaacgtgtgcccaaggtcatcgggatgcagcttgcttttatacattttagagaggcatgcgacatcaatcaaatacacttaagaaatacatgggattgatccagaaaggtgggacaactcaaagcagagggagt-gggggTGGGAGAGGTTGGGAGTAGCAGAGGGGGGTT---GGGGGATGGGTGGGTA---------TTGGGGTTtgggggttgattccaggctataggtgaatttaaacatttttt---ttgttgataattggttaagtttgtttcaagacctgggattgatagaaagggaatgttcaggttaagatagaagattgtggagaccaaggttcttttg--------aagtctta-tagtggttgcccttagagaaaataaatgacaaatgtttactattcagatttttaaaaggtactagacttttagttaatctctttaggactgggagggccATTTTTTTC i macFas5.chr5 I 3 C 0 s macNem1.NW_012010911v1 34934981 523 - 40319822 aaaaaaGgaagagatttattctaagccaaatatgagtgaccatagccagtgacacagccctcaggaggtcctgagaacgtgtgcccaaggtcatcgggatgcagcttgcttttatacattttagagaggcatgcgacatcaatcaaatacacttaagaaatacatgggattgatccagaaaggtgggacaactcaaagcagagggagt-gggggtgggagaggttgggagtagcagaggggggtt---gggggatgggtgggta---------ttagggtttgggggttgattccaggctataggtgaatttaaacatttttt---ttgttgataattggttaagtttgtttcaagacctgggattgatagaaagggaatgttcaggttaagatagaagattgtggagaccaaggttcttttg--------aagtctta-tagtggttgcccttagagaaaataaatgacaaatgtttactattcagatttttaaaaggtactagacttttagttaatctctttaggactgggagggccATTTTTTTC i macNem1.NW_012010911v1 I 3 C 0 s cerAty1.NW_012000798v1 4488941 523 - 9219162 aaaaaaGgaagagatttattctaagccaaatatgagtgaccatagccagtgacacagccctcaggaggtcctgagaatgtgtgcccaaggtcatcgggatgcagcttgcttttatacattttagagaggcatgcgacatcaatcaaatacacttaagaaatacatgggattgatccagaaaggtgggacaactcaaagcagagggagt-gggggtgggagaggttgggagtagcagaggggggtt---gggggatgggtgggta---------ttggggtttgggggttgattccaggctataggtgaatttaaacatttttt---ttgttgataattggttaagtttgtttcaagacctgggattgatagaaagggaatgttcaggttaagatagaagattgtggagaccaaggttcttttg--------aagtctta-tagtggttgcccttagagaaaataaatgacaaatgtttactattcagatttttaaaaggtactagacttttagttaatctctttaggactgggagggccATTTTTTTC i cerAty1.NW_012000798v1 I 3 C 0 s chlSab2.chr7 79013814 494 + 135778131 aaaaaaagaagagatttattctaagccaaatatgagtgaccatagccagtgacacagccctcaggaggtcctgagaacacgtgcccaaggtcatcgggatgcagcttgcttttatacattttagagaggcatgcgacatcaatcaaatacacttaagaaatacatgggattgatctagaaaggcgggacaactcaaagcagaggtagt-gggggtgggagaggttgggggtagcagacgggggtt---gg-----------------------------------------ttccaggttataggtgaatttaaacattttttttgttgttgataattggttaagtttgtttcaagacctgggattaatagaaagggaatgttcaggttaagatagaagattgtggagaccaaggttcttttg--------aagtctta-tagtggttgcccttagagaaaataaatgacaagtgtttactattcagatttttaaaaggtactagacttttagttaatctctttaggactgggagggccATTTTTTTC i chlSab2.chr7 I 8 C 0 s colAng1.NW_012114544v1 6012476 533 + 8656713 aaaattggaagagatttattctaagccaaatatgagtgaccacagccagtgacacagccctcagggggtcctgagaacatgtgcccaaggtcatcgggatgcattttgcttttatacattttagagaggcgtgtgacatcaatcaaatacagttaagaaatacatgggattgatccagaaaggtgggacaactcaaagcagaggGAGT-TGGCG-GGGAGAGGTTGGGAGTAGCAGAGTGGGGTT---GGGGGATGGGTGGGTA---------TTGGGGTTtgggggttgcttccaggctataggtgaatttaaacatttttttttttgttgataattggttaagtttgtttcaaaacctgggattgatagaaagggaatattcaggttaagatagaagattgtggagaccaaggttcttttgaagtcttaaagtctta-tagtggttgcccttagagaaaataaatgacaagtgtttcctattcagatttttaaaaggtactagacttttagttaatctctttaggactgggagggccATTTTTTTC i colAng1.NW_012114544v1 I 1 C 0 s calJac3.chr3 129458513 525 - 190850796 ---atttgaagatatttattctaagccaaatatgagtgcccatggctagtgacatagcctacaggaggtcctgagaacatgtacccaagacggtcgggaggctgcttgcttttatacattttagagaggcataagacatcaatcaaatacacttaataaaaacattggcttggtcca-aagg-ctgaacaactcaaagcagggggagtggggggtgccaggGGTTT-GGGGAGTAA--GGGAATTTGGGGGGAATGGGTGGGTATTGGGGTTGTTGGAGTTCtggggttggttccaggctataggtgaatttaaatgttttc----tggttgataattggttgagtttgtttaaagacctgggattgatagaaaggaaatgtttaaattaagataaaagattgtggagaccaaggttcttttg--------aagtctta-tagtggctgcccttagagaggataaatgataaatgtttcctattcagatctttagaaggtgctagacttttagtttatctctttagggctgggagggc-t-tTTTTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530080 509 - 25294431 --tatttgaagatatttattctaagccaaatattagtgaccatggccagtgacatagcccacaggaggtcctgagaacatgtgcccaagatggtcaggatgcagcttgcttttatacatttcagagacgcatgagatgtcaatcatatacacttaataaatacattgatttggtcca-aaagcctagacaactcaaagcaggaggagt-ggggatgccagatgtta-gaggGGTAA--GGGAATTTGGGGGGAATGGTTGGGTATTGGGGTTGTTGGGGTTCtggggttggttccaggctataggtgaatttaaacattttc----tggttgataattggttgagtttgtttaaagacctgggattgatagaaaggaaatgttcaagttgagat-aaagattgtggagaccagtgttcttgtg--------aagtctta-tagcggctgccc-----------------taagtgtttccgattcggatctttagaaggtgctagacttttagtttatctttttaggactgggagggTAG-TTTTTTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4084822 521 - 6311556 --tatttgaagagatttattctaagccaaatatgagtgaccatggccagtgacatagcccacaagtggtcctgagaacatgtgcccaagatggttgggatgcagcttgctttcatacattttagacaggcatgagacgtcaatcaaatacacttaataaatacattgatttggtcca-aaaggctagaaaactcaaagcagggggagt-gggggtgccaggtgtta-ggGGGGTAA--GGGAATTTGGGGGGAATTGGTGGGTACTGGGGTTGTTGGGGTTCtggggttggttccaggctataggtgaatttaaacattttc----tggttgataaatggtt--gtttgcttaaagacctgggattgatagaaaggaaatgttcagact-agatagaagac--tggagaccaaggttcatttg--------aagtctta-tagcggctgcccttagagaggat-aatgataagtgtttcctattcggatctttagaaggtgctagacttttagtttatctatataggactgggagggcAG-TTTTTTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941371 523 + 15034901 ---atttgaagagatttattctaagccaaatattcatgaccatggccagtgacatagcccacaggaggtcctgagaacatgtgcccaagatggtcagga----acttgcttttatacattttagagaggcatgagatgtcaatcaaatacacttaataaatacattgatttgatcca-aaaggctagacaactcaaagcagggagagt-ggcggTGCCCGGTGTTAGGGGGGGCAA--GGGAATTTGAGGGGAATGGGTGGGTACTGGGGTTGTTGGGGTTCtggggttggttccagggtataggtgaatttaaacattttc----tggtggataattggttgagtttgtttaaagatctgggattgatagaaaggaattgctcagactgagataaaagactgtggagaccaaggttcttttg--------aagtctta-tagcggctgcccttagagaggataaatgataagtgtttcctattcggatctttagaaggtgctagacttttagtttatctctttaggactgggagggcct-TTTTTTC i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1783345 19 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e canFam3.chr19 44064131 3 - 53741614 I e otoGar3.GL873702 964709 15 - 3201129 I e manLeu1.NW_012103277v1 2789645 5408 - 3013352 T a score=90146.000000 s hg38.chr9_KI270719v1_random 63618 10 + 176845 ATATTATAAT s panTro5.chr4 135088401 10 + 194502333 ATACTATAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 68749 10 - 70559 ATATTATAAT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483001 10 - 115148730 ATATTATAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131424731 10 + 190429646 ATATTATAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130943738 10 + 189454096 ATATTATAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34935504 10 - 40319822 ATATTATAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4489464 10 - 9219162 ATATTATAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014308 10 + 135778131 ATATTATAAT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6013009 10 + 8656713 ATATTATAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459038 10 - 190850796 ATATTATAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530589 10 - 25294431 ATAGTATAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4085343 10 - 6311556 ATATTATAGT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941894 10 + 15034901 ATATTATAAT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44064134 10 - 53741614 ATATTGCTAT i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1783364 10 + 5974691 ataatatcat i dasNov3.JH569232 I 19 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e otoGar3.GL873702 964709 15 - 3201129 I e manLeu1.NW_012103277v1 2789645 5408 - 3013352 T a score=1370112.000000 s hg38.chr9_KI270719v1_random 63628 146 + 176845 TTATCTCCTTCATGTCTGTAACAAAG-------------------------ATAGGAATCGC-TATAAAGTGTCTTCCCAGTTTCTGCCTAACCAC-ATCCCTGGATTTCCTGGCCCCTGGCTTGGCATATGTTTGGGGTTAGC-------------------------cttctcccact--gctaatttgtatgccata s panTro5.chr4 135088411 146 + 194502333 TTATCTCCTTCATGTCTGTAACAAAG-------------------------ATAGGAATCGC-TATAAAGTGTCTTCCCAGTTTCTGCCTAACCAC-ATCCCTGGATTTCCTGGCCCCTGGCTTGGCATATGTTTGGGGTTAGC-------------------------cttctcccact--gctaatttgtatgccata i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 68759 146 - 70559 TTATCTCCTTCATGTCTGTAACAAAG-------------------------ATAGGAATCGC-TATAAAGTGTCTTCCCAGTTTCTGCCTAACCAC-ATCCCTGGATTTCCTGGCCCCTGGCTTGGCATATGTTTGGGGTTAGC-------------------------cttctcccact--gctaatttgtatgccata i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483011 170 - 115148730 TTATCTCTTTCATGTCTGTAACAAAG-------------------------ATAGAAATCGC-TATAAAGTGTCTTCCCAGTTTCTGCCTAACCGC-ATCCCTGGATTTCCTGgcccctggcttggcatatgtttggggttagccttctttcatatgctcacaaa-tttcttctcccact--gctaatttgtatgccata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131424741 169 + 190429646 TTATTTCCTTCATGTCTGTAACAAAG-------------------------ATAGGAAGCAC-TATAAAGTATCTTCCCAGTTTCTG-CTAACAGC-ATCACTGGATTTCCTGgcccctggcttggcatatatttggggttagtcttctttcatatgctcacaaa-tttcttctcccact--gttaatttgtatgccata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130943748 169 + 189454096 TTATTTCGTTCATGTCTGTAACAAAG-------------------------ATAGGAAGCAC-TATAAAGTATCTTCCCAGTTTCTG-CTAACAGC-ATCACTGGATTTCCTGgcccctggcttggcatatgtttggggttagtcttctttcatatgctcacaaa-tttcttctcccact--gttaatttgtatgccata i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34935514 169 - 40319822 TTATTTCCTTCATGTCTGTAACAAAG-------------------------ATAGGAAGCAC-TATAAAGTATCTTTCCAGTTTCTG-CTAACAGC-ATCACTGGATTTCCTGgcccctggcttggcatatgtttggggttagtcttctttcatatgctcacaaa-tttcttctcccact--gttaatttgtatgccata i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4489474 170 - 9219162 TTATTTCCTTCATGTCTGTAACAAAG-------------------------ATAGGAAGCAC-TATAAAGTATCTTCCCAGTTTCTGCCTAACAGC-ATCGCTGGATTTCCTGgcccctggcttggcatatgtttggggttagtcttctttcatatgctcacaaa-tttcttctcccact--gttaatttgtatgccata i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014318 170 + 135778131 TTATCTCCTTCATGTCTGTAACAAAG-------------------------ATAGGAAGCGC-TATAAAGCATCTTCCCAGCTTCTGCCTAACAGC-ATCGCTGGATTTCCTGgcccctggcttggcatatgtttggggttagtcttctttcatatgctcacaaa-tttcttctcccact--gttaatttgtatgccata i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6013019 170 + 8656713 TTATCTCCTTCATGTCAGTAACAAAG-------------------------ATAGGAAGCGC-TATAAAGTATCTTCCCAGTTTCTGCCTAACAGC-ATGGCTGGATTTCCTGGCCCCTGGCTTGGCATATGTTTGGGGTTAGTCTTCTTTCGTATGCTCACAAA-CTTCTTCTCCCACT--GTTAATTTGTATGTCATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459048 170 - 190850796 TTATCTCCTTCATTTCTACAACAAAG-------------------------ATAGGAAGCAC-TATAAAGTAACTTCCCAGTTTCAGCCTAACCCT-ATCCCTGGACTTCCTGGCCCCTGGCTTGGTATATGTTTGGGCTTAGCTTTCTTTCATAGGCTCACAAA-TTTCTTCTCCCACT--GCTAATTTCTATGCCATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530599 170 - 25294431 GTATCTCCTTCATTTCTGCAACAAAG-------------------------ATAGGAAGCAC-TATAAAGTATCGTCCCAGTTTCTGCCTAACCCT-ATCCCCGGACTTCCTGGCCCCTGGCTTGGTATATGTTTGGGCTTAGCTTTATTTCACATGCTCACAAA-TTTCTTCTCTCACT--GCTAATTTGTATGCCATA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4085353 170 - 6311556 TTATCTCCTTCATTTCTGCAACAAAG-------------------------ATAGGAAGTAC-TATAAAGTATCGTCCCAGTTTCTGCCTAACCCT-ATCCCTGGGCTTCCTGGCCCCTGGCTTGGTATATGTTTGGGCTTAGCTTTCTTTCATATGCTCACAAA-TTTCTTCTCCCACT--GCTAATTTGTATGCCATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14941904 170 + 15034901 TTATCTCCTTCATTTCTGCAACAAAG-------------------------ATAGGAAGCAC-TATAAAGTATTGTCCCAGTTTCTGCCTAACCCT-ATCTCTGGACTTCCTGGCCCCTGGCTTGGTATATGTTTGGGCTTAGCTTTCTTTTATATTCTCACAAA-TTTCTTCACCCATT--GCTAATTTGTATGTGGTA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 964724 163 - 3201129 TTGTCTTCCTCATGTCTGCAGCCAAA-------------------------GTAGGAAGTAT-CATGGGACGTCCTCCTCGTTTCTGCTTAACATCTGCCTTTGAATTTTCTGGCAC-------AGCACGTG-TTAGAGTTGGCCTTGGTTCATATGCTGACACA-TTTCTTCTCCTACT--GCCTATTTGTATGTTGTA i otoGar3.GL873702 I 15 I 2107 s canFam3.chr19 44064144 172 - 53741614 TTATTTCCTTCACATTTGCATTCAAA-------------------------ACAGGAAGAACTTTTGAAATAgcttcccaatccctgttcaacaac-tgtactatattacctgatccctggcagagcacatgttttgggctagccctattctatatactaacacattttcttctttcact--gctcatttgtatgccaaa i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1783374 195 + 5974691 gaattccctttatgtctacagccaagtttagatattggaacagggtcaCCTGTAAGAAGTAC-AATGGAGTGTCTCACCAATCTTATTTTAATCTC-CTCTATGGAATTCCTTGCCACTGGCAGAGCACATATTCtagactagcctcc--tcacatgttcacata-tatctgctcccaatcagcttacttgtatgccaaa i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e manLeu1.NW_012103277v1 2789645 5408 - 3013352 T a score=219236.000000 s hg38.chr9_KI270719v1_random 63774 30 + 176845 agatggttgttttgttcctcagt-----atattta s panTro5.chr4 135088557 30 + 194502333 agatggttgttttgttcctcagt-----acattta i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 68905 30 - 70559 agatggttgttttgttcctcagt-----acattta i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483181 30 - 115148730 agatggttgttttgttcctcagt-----acattta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131424910 30 + 190429646 agatggttgttttgttcctcagt-----acattta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130943917 30 + 189454096 agatggttgttttgttcctcagt-----acattta i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34935683 30 - 40319822 agatggttgttttgttcctcagt-----acattta i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4489644 30 - 9219162 agatggttgttttgttcctcagt-----acattta i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014488 30 + 135778131 agatagttgttttgttcctcagt-----acattta i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6013189 30 + 8656713 AGATGGTTGTTTTGTTCCTTAGT-----ACATTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459218 28 - 190850796 AGATGGTTGTTTTGTTTCTCAGTATATT------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530769 23 - 25294431 AGATGGTTGTTTTGTTTCTCAGT------------ i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4085523 23 - 6311556 AGATGGTTGTTTTGTTTCTCAGT------------ i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14942074 23 + 15034901 AGATGGTTGTTTTGTTTCTCAGT------------ i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44064316 29 - 53741614 agaaagttg-tttgctcccaaat-----acattta i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1783569 30 + 5974691 atttggttgttttgttcctgaat-----atatttg i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e otoGar3.GL873702 964887 2107 - 3201129 I e manLeu1.NW_012103277v1 2789645 5408 - 3013352 T a score=589244.000000 s hg38.chr9_KI270719v1_random 63804 67 + 176845 tgtcagatataattgttactgtag----------t------aaaca-actattgtgtaaaacaatgataagtgagtgtgaaagt s panTro5.chr4 135088587 63 + 194502333 tgtcagatataattgttactgtag----------t------aaaca-actattgtgtaaaacaatgat----gagtgcgaaagt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 68935 67 - 70559 tgtcagatataattgttactgtag----------t------AAACA-ACTATTGTGTAAAACAATGATAAGTGAGTGTGAAAGT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483211 66 - 115148730 tgtcagatataattgttactgtag----------t------AAACA-ACTATTGTGTAAAA-AATGATAAATGAGTGTGAAAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131424940 67 + 190429646 tgtcagatgtaagtgttactgtag----------t------AAACA-ACTGTTGTGTAAAACAATGATAAATTAGTATGAAAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130943947 67 + 189454096 tgtcagatgtaagtgttactgtag----------t------aaaca-actgttgtgtaaaacaatgataaattagtatgaaagt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34935713 67 - 40319822 tgtcagatgtaagtgttactgtag----------t------AAACA-ACTGTTGTGTAAAACAATGATAAATTAGTATGAAAGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4489674 67 - 9219162 tgtcagatataagtgttactgtag----------t------AAACA-ACTGTTGTGTAAAACAATGATAAATTAGTATGAAAGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014518 67 + 135778131 tgtcagatataagtgttactgtag----------t------aaaca-actgttgtgtaaaacaatgataaatgagtatgaaagt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2784237 67 - 3013352 TGTCAGATATAAGTGTTACTGTAG----------T------AAACA-ACTGTTGTGTAAAACAATGATAAATTAGTATGAAAGT i manLeu1.NW_012103277v1 T 5408 C 0 s colAng1.NW_012114544v1 6013219 67 + 8656713 TGTCAGGTATAATTGTTACTGTAG----------T------AAACA-ACTATTGTGTAAAACAATGATAAATGAGTATGAAAGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459246 67 - 190850796 TGCTGGATATAATTGTTACTGTAA----------T------AAACA-ACTATTGTTTAAAATAATGTTAAATGATTCTGAAAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530792 61 - 25294431 ------ATATAATTGTTACTGTAG----------T------AAACA-GCtattgtgtaaaataatgataaatgcttatgaaagc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4085546 61 - 6311556 ------ATATAATTGTTACTGTAG----------T------AAACa-actattgtgtaaaataatgataaatgattatgaaagc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14942097 61 + 15034901 ------ATATAATTGTTACTGTAG----------T------AAATA-ACTATTGTGTAAAATAATGATAAATGATTATGAAAGC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44064345 74 - 53741614 taccagatataattattaatgtaG----------CCAGATAACACATACTATTATGTAAAATAGAGATAAATTAGTATGAAAAT i canFam3.chr19 C 0 I 52 s dasNov3.JH569232 1783599 75 + 5974691 caagagagatacatgttactataggtagatacttt------aaata-agtattaggtaaaacaatgaT-AATCACTATAAAAG- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=572218.000000 s hg38.chr9_KI270719v1_random 63871 82 + 176845 aaaaaaacaaat----------cagaaaatgaagcagaatgtaaataattgataaagacaagttctgaaaaa--atgtcaaattggatttag-ga s panTro5.chr4 135088650 82 + 194502333 aaaaaaacaaat----------cagaaaataaagcagaatgtaaataattgataaagacaagttctgaaaaa--atgtcaaattggatttag-ga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 69002 82 - 70559 AAAAAAACAAAT----------CAgaaaatgaagcagaatgtaaataattgataaagacaagttctgaaaaa--atgtcaaattggatttag-ga i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483277 81 - 115148730 -AAAAAACAAAT----------CAgaaaataaagcagaatataaataattgataaagacaagttgtgaaaaa--atgtcaaattggatgtag-ga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131425007 76 + 190429646 AAA-----AAAT----------CAGAAAACAAAACAGAAtgtaaataattgataaagacaagttgtgaaaaa--atgtc-agttggatttaa-ga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130944014 76 + 189454096 aaa-----aaat----------cagaaaacaaaacagaatgtaaataattgataaagacaagttgtgaaaaa--atgtc-agttggatttaa-ga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34935780 76 - 40319822 AAA-----AAAT----------CAGAAAACAAAACAGAAtgtaaataattgataaagacaagttgtgaaaaa--atgtc-agttggatttaa-ga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4489741 76 - 9219162 AAA-----AAAT----------CAGAAAACAAAACAGAAtgtaaataattgataaagacaagttgtgaaaaa--atgtc-agttggatttaa-ga i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014585 76 + 135778131 aaa-----aaat----------cagaaaacaaaacagaatgtaaataattgataaagacaagtcgtgaaaaa--atgtc-aattggatttga-ga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2784304 76 - 3013352 AAA-----AAAT----------CAGAAAACAAAACAGAATGTAAATAATTGATAAAGACAAGTTGTGAAAAA--ATGTC-AGTTGGATTTAA-GA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6013286 76 + 8656713 AAA-----AAAT----------CAGAAAAGAAAACAGAAtgtaaataattgataaagacaagtcgtgaaaaa--atgtc-aattggatttag-ga i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459313 85 - 190850796 AAA-----GAAA--AAGTTTATCAGAAAACAAAACAGAATGTAAAGAATTGATAATGACAAGTTGTGAAAAG--ATGTCAGATTGGATTGAG-GA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530853 88 - 25294431 aaa-----aaaatccagtttatcagaaaacaaaacagaatgtaaagaattgataaatacaagttgtgaaaag--atgtcaaattggatttagaga i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4085607 87 - 6311556 aaa-----aaat-ccagtttatcaaaaaacaaaacagaatgtaaagaattgataaatacaagttgtgaaaag--atgtcaaattgaatttaggga i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14942158 87 + 15034901 AAA-----AAAT-CCAGTTTATCAGAAAACAAAACAGAATGTAAAGAATTGATAAATACAAGTTATGAAAAG--ATGTCAAATTGGATTCAGGGA i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1783674 68 + 5974691 -------------------------AAAACATaatactatggaaagaattgataaa-ataagtttctaaaaatgctatcaaattatatatat-aa i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e canFam3.chr19 44064419 52 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=1499705.000000 s hg38.chr9_KI270719v1_random 63953 181 + 176845 gtcagacacctgtaaga--------ggtttatttgaggggctaagcg--tgctggtatttacacacatattacttcttgtgtctcttcaatttattggttcatttaaaaaaaccaaagctaaaaatcataaaatat-gcattatgTAAAAAAAAAGAATGTT--CAA--TGAATCC----------------ATACATACAT-----ACCGAAGACC s panTro5.chr4 135088732 181 + 194502333 gtcagacacctgtaaga--------ggtttatttgaggggctaagcg--tgctggtatttacacacacattacttcttgtgtctcttcagtttattggttcatttcaaaaaaccaaagctaaaaatcataaaatat-tcattatgTAAAAAGAAACAATGTT--CAA--TGAATCC----------------ATACATACAT-----GCCGAAGACC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 69084 178 - 70559 gtcagacacctgtaaga---------gtttatttga-gggctaa-cg--tgctggtatttacacacatattacttcttgtgtctcttcaatttattggttcatttcaaaaaaccaaagctaaaaatcataaaatat-tcattatgTAAAAAGAAACAATGTT--CAA--TGAATCC----------------ATACATACAT-----ACCGAAGACC i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483358 180 - 115148730 gtcaaacacctgt-aga--------ggtttatttgagggggtaggcg--tgctgatatttacacacatattacttcttgtgtctcttcaacttattggttcatttcaaaaaaccaaagctaaaaatcataaaatat-tcattatgTCAAAAGAAACAATGTT--CAA--TGAATCC----------------ATACATACAT-----ACCGAAGACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131425083 180 + 190429646 gtcagacatctgtaaga--------ggtctattcgagggggtaggtg--tgctggcatttacacacatattacttc-tgtgtctcttcaacttattggttcatttcaaaaaaccaaagctaaaaatcataaaatat-tctttatgTAAAAACAAACAATGTT--CAA--TGAATCC----------------ATAGGTAAAT-----ACCTAAGACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130944090 180 + 189454096 gtcagacatctgtaaga--------ggtctattcgagggggtaggtg--tgctggcatttacacacatattacttc-tgtgtctcttcaacttattggttcatttcaaaaaaccaaagctaaaaatcataaaatat-tctttatgtaaaaacaaacaatgtt--caa--tgaatcc----------------ataggtaaat-----acctaagacc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34935856 180 - 40319822 gtcagacatctgtaaga--------ggtctattcgagggggtaggtg--tgctggcatttacacacatattacttc-tgtgtctcttcaacttattggttcatttcaaaaaaccaaagctaaaaatcataaaatat-tctttatgTAAAAACAAACAATGTT--CAA--TGAATCC----------------ATAGGTAAAT-----ACCTAAGACC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4489817 180 - 9219162 gtcagacatctgtaaga--------ggtctattcgagggggtaggtg--tgctggcatttacacacatattacttc-tgtgtctcttcaacttattggttcatttcaaaaaaccaaagctaaaaatcataaaatat-tctttatgTAAAAACAAGCAATGTT--CAA--TGAATCC----------------ATAGGTAAAT-----ACCTAAGACC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014661 180 + 135778131 gtcagacatctgtaaga--------ggtctattcgagggggtaggtg--tgctggcatttacacacatattacttc-tgtgtctcttcaacttattggttcatttcaaaaaaccaaagctaaaaatcaaaaaatat-tcttcatgtaaaaacaaacaatgtt--caa--tgaatcc----------------ataggtaaat-----acctaagacc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2784380 196 - 3013352 GTCAGACATCTGTAAGA--------GATCTGTTCGAGGGGGTAGGTG--TGCTGGCATTTACACACATATTACTTC-TGTGTCTCTTCAACTTATTGGTTCATTTCAAAAAACCAAAACTAAAAATCATAAAATAT-TCTTTATGTAAAAACAAACAATGTT--CAA--TGAATCCATAGCTAAGTACCTAAATAGCTAAAT-----ACCTAAGACC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6013362 180 + 8656713 gtcagacatctgtaaga--------ggtttattcgaggggataggtg--tgctggcatttacacacatattacttc-tgtgtctcttcaacttattggttcatttcaaaaaaccaaagctaaaaatcataaaatat-tctttatgTAAAAACAAACAATGTT--CAA--TGAATCC----------------ATAGGTAAAT-----ACCTAAGACC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459398 179 - 190850796 GTCAGACACTTCT-AGA--------GGTTTATTTGAGGGG-TAGGTA--TGGTGGTATCTACACGCATCCTACTTCTTATGTTTCTTGAACTCATTGGTTCATTTCAAAAAAGCAAAGCTAAAACTCATAAAATAT-TAATTATGTAAAAGGAAACAATGCT--CAA--TGAATCA----------------ATACATAAAT-----ACCTAAGCCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6530941 179 - 25294431 gtcagacacttgtaaga--------ggtttatttgagggg-taggga--tggtggtatctacacacatattactccttatgtctcttgaactcattggttcatttcaaaaaagcaaaagt-aaactcataaaatat-tcattatgtaaaaggaaacagtgtt--caa--ttaatca----------------atacataaat-----acctaagccc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4085694 180 - 6311556 gtcagacaattgtaaga--------ggtttatttgagggg-taggca--tggtggtatctacccacagattacttcttatgtcccttgaactcattggttcatttcaaaaaagcaaagctaaaactcataaaatat-tcattatgtaaaaggaaacaatgtt--caa--tgaatca----------------atacataaat-----acctaacccc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14942245 178 + 15034901 GTCAGACACTTGTAAGA--------GGTTTATTTGAGGGT---AGCA--TGGTGGTATCTACACATATATTACTTGTTATGTCTCTTGAACTCATTGGTTCATTTCAAAAAAGCAAAGCTAAAACTCATAAAATAT-TAATTATGTAAAAGGAAACGATGTT--CAA--TGAATCA----------------ATACATAAAT-----ACCTAAGCCC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44064471 181 - 53741614 gtCAGACATCTGTATGCTTACCCTTTTTTTATTGGGGGG-------------TGATGTCTGCATACACATCATTTTTCATGTATTTTCAACTTATTCATCCATTTT-AAGAATCAGCACTgaaaacaatagaccata-cctattgcaaaaagaaacaaggttaacaaactgaattc----------------atcggtacat-----tgagaggatc i canFam3.chr19 I 52 I 1055 s dasNov3.JH569232 1783742 186 + 5974691 gtcaggaacctataaga--------tgttttttttggggggaaggtgcattcctatatctgcactaagattacttcttatgtgtgat-aactaactgtacaatttcaagaaaccaaccttaaaaaccatgaactat-accttatgcaaaaagaaacaatgct--ca---tgaaccc----------------acacacaaacttaagacctatgacc i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=515069.000000 s hg38.chr9_KI270719v1_random 64134 59 + 176845 TTTGTCGGATAGTTGACAAGTATATTTGCATATATGTTTTCCAAGGTAAAAGAAAATTT s panTro5.chr4 135088913 59 + 194502333 TTTGTCGGATAGTTGACAAGCATATTTGCATATATGTTTTCCAAGGTAAAAGAAAATTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 69262 59 - 70559 TTTGTCGGATAGTTGACAAGTATATTTGCATATATGTTTTCCAAGGTAAAAGAAAATTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483538 59 - 115148730 TTTGTCAGACAGTTGACAAGTATATTTGCATATATGTTTTCCAAGGTAAAAGAAAATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131425263 59 + 190429646 TCTGTCAGATAGTTGACAAGTATATTTGCATGTATGTTTTCCAAGTTAAAAGAAAATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130944270 59 + 189454096 tctgtcagatagttgacaagtatatttgcatgtatgttttccaagttaaaagaaaatTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34936036 59 - 40319822 TCTGTCAGATAGTTGACAAGTATATTTGCATGTATGTTTTCCAAGTTAAAAGAAAATTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4489997 59 - 9219162 TCTGTCAGATAGTTGACAAGTATATTTGCATGTATGTTGTCCAAGTTAAACGAAAATTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014841 59 + 135778131 tctgtcagatagttgacaagtatatttgcatgtatgctttccaagttaaaagaaaatTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2784576 59 - 3013352 TCTGTCAGATAGTTGACAAGTATATTTGCATGTATGTTGTCCAAGTTAAACGAAAGTTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6013542 59 + 8656713 TCTGTCACATAGTTGACAGGTATATTTGCATGTACGTTTTCCAAGTTAAAAGAAAATTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459577 59 - 190850796 TTTGTCAAATAGTTGACAAGTGTATTTGCATGTATGTTTTCCAAGTTATAAGATAATCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6531120 59 - 25294431 tttgtccaatagttgacaagtgtatttgcatgtatgttttccaatttataagaaaatCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4085874 58 - 6311556 tttgtcaaacagttgacaagtgtatttgaatgtatg-tttccaagttataagaaaatCT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14942423 59 + 15034901 TTTGTCAAATAGTTGACAAGTGTATTTGCATGTATGTTTTCCAAGTTATAAGAAAATCT i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1783928 59 + 5974691 tccattagataattagcatgtaaatgtatactcatgtattttgaattaaaagaaaattt i dasNov3.JH569232 C 0 I 51 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e canFam3.chr19 44064652 1055 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=20055.000000 s hg38.chr9_KI270719v1_random 64193 2 + 176845 GT s panTro5.chr4 135088972 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 69321 2 - 70559 GT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483597 2 - 115148730 GT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131425322 2 + 190429646 GT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130944329 2 + 189454096 GT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34936095 2 - 40319822 GT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4490056 2 - 9219162 GT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014900 2 + 135778131 GT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2784635 2 - 3013352 GT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6013601 2 + 8656713 GT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459636 2 - 190850796 GT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6531179 2 - 25294431 GT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4085932 2 - 6311556 GT i cebCap1.NW_016107420v1 C 0 I 56 s aotNan1.NW_018507635v1 14942482 2 + 15034901 GT i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1783987 51 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e canFam3.chr19 44064652 1055 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=373811.000000 s hg38.chr9_KI270719v1_random 64195 58 + 176845 ggctgggcacggcaactcatgcctgcaatcccagcatttcaggaggccaaggccggtg s panTro5.chr4 135088974 58 + 194502333 ggctgggcatggcaactcacgcctgcaatcccagcatttcgggaggccaaggcaggtg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 69323 58 - 70559 ggctgggcacggcaactcatgcctgcaatcccagcattttgggaggccaaggccggtg i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483599 58 - 115148730 ggctgggcacggcgactcatgcctgcaatcccagcatttcgggaggccaaggcaggtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131425324 58 + 190429646 GGATgggcactgtgactcacgcctgcaatcccagcattttgggaggccaagacaggtg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130944331 58 + 189454096 GGATgggcactgtgactcacgcctgcaatcccagcattttgggaggccaagacaggtg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34936097 58 - 40319822 GGATgggcactgtgactcatgcctgcaatcccagcattttgggaggacaagacaggtg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4490058 58 - 9219162 GGATgggcatggtgactcacgccggcaatcccagcattttgggatgccaaagcaggtg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014902 58 + 135778131 GGATgggtacggtgactcacgcctgcaatcccagcattttgggaggccaaggcaggtg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2784637 58 - 3013352 GGATgggcacggtgactcacgcctgcaatcccagcatttttggaggtcaagtcaggtg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6013603 58 + 8656713 AGATgggcacggtgactcatgcctgcaatcccagcattttgggaggccaaagcaggtg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459638 57 - 190850796 -gctgggcaaaatggctcatgtctgtaatcccagaattttggagggtccaggtgggtg i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6531181 57 - 25294431 -GTTgggcaaaatggctcatgtctgtaattccagaattttgggaggtccaggtgggtg i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14942484 57 + 15034901 -GTTgggcaaagtggctcgtgtctgtaatcccagaattttggggggtccaggtgggtg i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1783987 51 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e canFam3.chr19 44064652 1055 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I e cebCap1.NW_016107420v1 4085934 56 - 6311556 I a score=1777934.000000 s hg38.chr9_KI270719v1_random 64253 245 + 176845 gatcagctgaagtcaggcatccaagaccagcctggccaacacggtgaaaccccatctctactaaaaat--------------ac---aaaaaaa-tagctgggcgtggtggctggcacctgtaatcccagctacttgggaggccgaagcaagagaattgcttgaacccgggaggcagagtttgcagtaagctgagatcaagccactgcactacagcctgggcaacaagagtgaaactctgtctc---------aaaaaaaaaaaaaaagaaa s panTro5.chr4 135089032 246 + 194502333 gatcagctgaagtcaggcatccaagaccagtctggccaacacggtgaaactccatctctactaaaaat--------------ac---aaaaaaaatagctgggcgtggtggctggcacctgtaatcccagctacttgggaggccgaggcaggagaattgcttgaacccgggaggcagagtttgcagtaggctgagatcaagccactgcactacagcctgggcaacaagagtgaaactctgtctc---------aaaaaaaaaaaaaaaaaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 69381 243 - 70559 gatcagctgaagtcaggcatccaagaccagcctggccaacacggtgaaaccccatctctactaaaaat--------------ac---aaaaaaa-tagctgggcatggtggctggcacctgtaatcccagctacttgggaggccgaggcaggagaattgcttgaacccgggaggcagagtttgcagtaagctgagatcaagccactgcactacagcctgggcaacaagagtgaaactctgtctc---------aaaaaaaaaaaaaa--aaa i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483657 229 - 115148730 gatcagctgaagtcaggcattcaagaccagcctggccaacatggtgaaaccctatctctactaaaaat--------------ac---aaagaaa-tagctgggagtggtggctggcacctgtaatcccagctattcgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtaagctgagatcgagccactgcactacagcctgggcaacaagagcaaaactctgtctc---------aaa---------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131425382 254 + 190429646 gatcacctgaagtcaggagttcaagaccagcctggccaagacagtaaaaccccatctctactaaatat--------------ac---aaaaaaa-tagctgagggtggtggctggcacctgtaatcccagctactcagtaggctgaggcaggagaatcgcttgaacttgggaggcagaggttgcaataagctgagattgagtcactgcactacagcttgggaaacaagagcaaaactctgtctcaaaaaaaaaaaaaaaaaaaaagaaaaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130944389 254 + 189454096 gatcacctgaagtcaggagttcaagaccagcctggccaagacagtaaaaccccatctctactaaatat--------------ac---aaaaaaa-tagctgagggtggtggctggcacctgtaatcccagctactcagtaggctgaggcaggagaatcgcttgaacttgggaggcagaggttgcaataagctgagattgagtcactgcactacagcttgggaaacaagagcaaaactctgtctcaaaaaaaaaaaaaaaaaaaaagaaaaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34936155 251 - 40319822 aatcacctgaagtcaggagttcaagaccagcctggccaagacagtaaaaccccatctctactaaatat--------------ac---aaaaaaa-tagctgagggtggtggctggcacctgtaatcccagctactcagtaggctgaggcaggagaatcgcttgaacttgggaggcagaggttgcaataagctgagattgagtcactgcactacagcttgggaaacaagagcaaaactctgtctc---aaaaaaaaaaaaaaaaaagaaaaga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4490116 245 - 9219162 gatcacctgaagtcaggagttcaagaccagcctggccaagacagtaaaaccccatctctactaaaaat--------------ac---aaaaaaa-tagctgagggtggtggctggcacctgtaatcccagctactcagtaggctgaggcaggagaatcgcttgaacttgggaggcagaggttgcaataagctgagattgagtcactgcactacagcttgggaaacaagagcaaaattctgtctc---------aaaaaaaaaaaaaaaaaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79014960 236 + 135778131 gatcacctgaagtcaggagttcaagaccagcctggccaagatagtaaaaccccatctctactaaaaat--------------acaaaaaaaaaa-tagctgagggtggtggctggcacctgtaatcccagctactcagtaggctgaggcaggagaattgcttgaacctgggaggcagacgttgcaataagctgagatcgagtcactgcactacagcttgggaaacaagagcgaaactctatctc---------aaaaaa------------a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2784695 245 - 3013352 gatcacctgaagtcaggagttcaagaccagcctggccaagacagtaaaaccccatctctactaaaaat--------------ac---aaaaaaa-tagctgagggtggtggctggcacctgtaatcccagctactctgtaggctgaggcaggagaatcgcttgaacttgggaggcagaggttgcaataagctgagattgagtcactgcactacagcttgggaaacaagagcaaaactctgtctc---------aaaaaaaaaaaagaaaaga i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6013661 243 + 8656713 gatcacctgaagtcaggagttcaagaccagcctggccaagatggtgaaaccccatctctactaaaaat--------------ac---aaaaaaa-tagctgagggtggtggctggcacctgtaattccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtaagctgagatcaagtcactgcactacagcctgggcaacaagagcgaaactccgtctc---------aaaaaaaaaaaaaaaaa-- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459695 248 - 190850796 gatcacctgaggtcagaagttcaagaccagctgggcccatatggggaaacaccatctctactaaaaat------gcaaaaaaagaaaaaaaaaa-tagctgggcatggtgataggcgcctgtaatcccagctactcagaaggctgaggcaggagaattgcttgaacctgggagacagaggttgcagtgagccaagatcctgccactgcgttccagcctgggcaacaagagtgaaactccatctc---------caaaaaaaaag-------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6531238 259 - 25294431 gatcacctgaggtcagaagttcaagaccagctgggccaatacggggaaaccccatctctaccaaaaatacacacacacacaaaaataataataa-taattgggcatggtggtgggcacctgtaatcccagctactcagaaggctgaggcagaagaattgcttgaaccttggagacagaggttgcagtgagccaagatcccgccactgcactatagcctgggcaacaagagtgaaactccatctc---------caaaaaaaaagaaaaa--- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4085990 229 - 6311556 gatcaccagaggtcagaagttcaagaccagctgggccaatatggggaaaccccatctctactaaaaat--------------acaaaagaaaaa-taac--ggcatgatggtgggtg---------ccagctactcagaaggctgaggcaggagaatcgcttgactctgggagacagaggttgcagtgagccaagatcctgccactgcactatagcctgggcaacaagagtgaaactccatctc---------caaaaaaaaaa-------- i cebCap1.NW_016107420v1 I 56 C 0 s aotNan1.NW_018507635v1 14942541 235 + 15034901 gatcacctgaggtcagaagttcaagaccagctgggccaatatggggaaaccccatctctactaaaaat--------------acaaaaaaaaaa-taactgggcatagtggtgggcgcctgtaatcccagctactcagaaggctgaggcaggagaattgcttgaagctgggagacagaggttacattgagccaagatcccgccactgaactatagcctgggc-----------aactccatctc---------caaaaaagaaaaaaaaa-- i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e dasNov3.JH569232 1783987 51 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e canFam3.chr19 44064652 1055 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=263096.000000 s hg38.chr9_KI270719v1_random 64498 49 + 176845 gaaaaag--------------aaaaAGAAAAAAGAAAATTTGTAGGATATGGATAAGTAATTC s panTro5.chr4 135089278 58 + 194502333 aaaaaaa-----gaaagtaaaaaaaagaaaaaagaaaaTTTGTAGGATATGGATAAGTAATTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 69624 49 - 70559 gaaaaag--------------aaaaagaaaaaagaaaaTTTGTAGGATATGGATAAGTAATTT i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483886 42 - 115148730 ---------------------aaaaaaaaaaatgaaaaTTTGTAGGATATGGATAAGTAACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131425636 63 + 190429646 aaataaaagaaagaaagaaaaggaaagaaaaaagaaaaTTTGTAGGAGATGGATAAGTAATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130944643 62 + 189454096 aaagaaaagaaagaaag-aaaggaaagaaaaaagaaaaTTTGTAGGAGATGGATAAGTAATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34936406 63 - 40319822 aaagaaaagaaagaaagaaaaggaaagaaaaaagaaaaTTTGTAGGAGATGGATAAGTAATTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4490361 63 - 9219162 aaagaaaagaaagaaagaaaagaaaagaaaaaagaaaaTTTGTAGGAGATGGATAAGTAATTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79015196 63 + 135778131 aaagaaaagaaagaaagaaaagaaaagaaaaAAGAAAATTTGTAGGAGATGGATAAGTAATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2784940 63 - 3013352 aaagaaaagaaagaaagaaaagaaaagaaaaAAGAAAATTTGTAGGAGATGGATAAGTAATTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6013904 45 + 8656713 ------------------aaagaaaagaaaaaagaaaaTTTGTAGGAGATGGATAAGTAATTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459943 35 - 190850796 ----------------------------aacagaaaaaTTTCTAGGATATATAAAAGTAATCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6531497 35 - 25294431 ----------------------------aaaagaaaaaTTTCTAGAATGTGAATAAGTAATCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4086219 35 - 6311556 ----------------------------aatagaaaaaTTTCTAGGATATGGATAAATAATTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14942776 40 + 15034901 -----------------------aaaagaatagaaaAATTTCTAGAATATGGATAAGTAATCT i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1784038 27 + 5974691 --------------GGTAGAATACAAGAAGAAAGGAGCTTT---------------------- i dasNov3.JH569232 I 51 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e canFam3.chr19 44064652 1055 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=3519538.000000 s hg38.chr9_KI270719v1_random 64547 457 + 176845 ATTTTAGAAGAATTT-TTTTTTGTAGAATGA-------TTTGTGCTAAAGCAA-TACATC-TCTTTCTATCATATACTGATATCTTGAAAA-TTTTATAACGTTTCTTGTCACATTCAGTATTTTAA----------AAATAGGATTGATTCTAAGTTTTGAGTTTAT-GGTGCATTTGAATATTAGAGATATTATCTC--ATACATTTCAAAGCTTTGCTGCATTCTAAACTCAGTCCTGCCT-TAGCCTTAGT-AATGGCAATGAAGTGCGGGGATAGAATGTTCACTATTTTTTT-ATGTGCTGTTAAAATTT-CATACCTCCTGTTCTATCTTGAAGTCTTACAGTTTTGGAATGGTGAGTGGGGGAAACAAGCATAAAAC-TATTACATAATTCATGTAGTTTTCACTGGGCAACAGTATCTATCCTCTGAATGGTGAAATGGCTAC--TTTTCATTTATTTATTTTTTTCTTT-------------CCTGGGGTA s panTro5.chr4 135089336 456 + 194502333 ATTTTAGAAGAATTGATTTTTTGTAGAATGA-------TTTGTGCTAAAGCAA-TACATC-TCTTTCTATCATAT-CTGATATCTTGAAAACTTTTAT---GTTTCTTGTCACATTCAGTATTTTAA----------AAATAGGATTGATTCT--GTTTTGAGTTTAT-GGTGCATTTGAATATTAGAGATATTATCTTTTATACATTTCAAAGCTTTGCTGCATTCTAAACTCAGTCCCGCCT-TAGCCTTAGT-AATGGCAATGAAGTGCGGGGATAGAATGTTCACTATTTTTTTTATGTTCTGTTAAAATTT-CATACCTCCTGTGCTATCTTGAAGTCTTACAGTTTTGGATTGGTGAGTGGGGGAAACAAGCATAAAAC-TATTACATAATTCGTGTAGTTTTCACTGGGCAACAGTATCTATCCTCTGAATGGTGAAATGGCTAC--TTTTCATTTATTTATTTTTTTCTTT-------------CCTGCGGTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 69673 458 - 70559 ATTTTAGAAGAATT--TTTTTTGTAGAATGA-------TTTGTGCTAAAGCAA-TACATC-TCTTTCTATCATATACTGATATCTTGAAAA-TTTTATAACGTTTCTTGTCACATTCAGTATTTTAA----------AAATAGGATTGATTCTAAGTTTTGAGTTTAT-GGTGCATTTGAATATTAGAGATATTATCTCTTATACATTTCAAAGCTTTGCTGCATTCTAAACTCAGTCCTGCCT-TAGCCTTAGT-AATGGCAATGAAGTGTGGGGATAGAATGTTCACTATTTTTTT-ATGTGCTGTTAAAATTT-CATACCTCCTGTTCTATCTTGAAGTCTTACAGTTTTGGAATGGTGAGTGGGGGAAACAAGCATAAAAC-TATTACATAATTCATGTAGTTTTCACTGGGCAACAGTATCTATCCTCTGAATGGTGAAATGGCTAC--TTTTCATTTATTTATTTTTTTCTTT-------------CCTGGGGTA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90483928 458 - 115148730 GTTTTAGAAGAATTG-TTTTTTGTAGAATGA-------TTTGTGCTAAAGCAA-TACATC-TCTTTCTATCATACACTGATATCTTGAAAACTTTTATAATGTTTCTTGTCACATTCAGTATTTTAA----------AAATAGGATTGATTCTAAGTTTTGAGTTTAC-GGTGCGTTTGAATATTAGAGATACTATCTCTTATACATTTCAAAGCTTTGCTGCATTCCAAACTCAGTCCTGCCT-TAGCCTTAGT-AATGGCAATGAAGTGTGGGGATAGAATGTTCACTATTTTTTT-ATGTGCTGTTAAAATTT-CATACCTTCTATGCTATCTTGAAGTCTTACAGTTTAGGAATGGTGAGTGGGGGAGACAAGCATAAAAC-TATTACATAATTCATGTCGTTTTCACTGGGAAACAGTATCTATCCTCTGAATGGTGAAATGGCTAC--TTTTTAGT--TTTTTTTTTTTCTTT-------------CCTAGGGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131425699 450 + 190429646 ATTTTAGAAACAATCATTTTATGTAGAATGA-------TTTGTGCTAAAACAG-CATTTA-TCTTTCTATCATATACTGATATCTTGAAAA-TTTTATAAGGTTTCTTGTCACATTCAGTATTTAAA----------AAATAGGATTGATTCTAAGTTTTGAGTTTAT-CATGCATTTGAATATTAGAGATATTATCTCTTGTTAATTTCTAAGCTTTGCTGTATTCCAAGCTCAGTCTTGCCT-TATCCTTAGT-AATGGCAATGAAGTGTGGGGATAGAATGTTCACTATTTTTTT-ATGTGCTGTTAAATTTT-CATACCTCATGTGCTATCTTGAAGTCTTATAGTATAGGAA---TGAGTGGGGGAGAGCAGCATAAAAC-TATTACCCAACTTATGTAGTTTTCACTGGGCAACAG----TATCCTCTGAATGGTGAAATGGCTAC--TTTTTATTTATTTA--TTTTTCTTT-------------CATGGGGC- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130944705 450 + 189454096 ATTTTAGAAACAATCATTTTATGTAGAATGA-------TTTGTGCTAAAACAG-CATTTA-TCTTTCTATCATATACTGATATCTTGAAAA-TTTTATAAGGTTTCTTGTCACATTCAGTATTTAAA----------AAATAGGATTGATTCTAAGTTTTGAGTTTAT-CATGCATTTGAATATTAGAGATATTATCTCTTGTTAATTTCTAAGCTTTGCTGTATTCCAAGCTCAGTCTTGCCT-TATCCTTAGT-AATGGCAATGAAGTGTGGGGATAGAATGTTCACTATTTTTTT-ATGTGCTGTTAAATTTT-CATACCTCATGTTCTATCTTGAAGTCTTATAGTATAGGAA---TGAGTGGGGGAGAGCAGCATAAAAC-TATTACCCAACTTATGTAGTTTTCACTGGGCAACAG----TATCCTCTGAATGGTGAAATGGCTAC--TTTTTATTTATTTA--TTTTTCTTT-------------CATGGGGC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34936469 450 - 40319822 ATTTTAGAAACAATCATTTTATGTAGAATGA-------TTTGTGCTAAAACAG-CATTTA-TCTTTCTATCATATACTGATATCTTGAAAA-TTTTATAAGGTTTCTTGTCACATTCAGTATTTAAA----------AAATAGGATTGATTCTAAGTTTTGAGTTTAT-CATGCATTTGAATATTAGAGATATTATCTCTTGTTAATTTCTAAGCTTTGCTGTATTCCAAGCTCAGTCTTGCCT-TATCCTCAGT-AATGGCAATGAAGTGTGGGGATAGAATGTTCACTATTTTTTT-ATGTGCTGTTAAATTTT-CATACCTCACGTGCTATCTTGAAGTCTTATAGTATAGGAA---TGAGTGGGGGAGAGCAGCATAAAAC-TATTACCCAACTTATGTAGTTTTCACTGGGCAACAG----TATCCTCTGAATGGTGAAATGGCTAC--TTTTTATTTATTTA--TTTTTCTTT-------------CATGGGGC- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4490424 450 - 9219162 ATTTTAGAAACAATCATTTTATGTAGAATGA-------TTTGTGCTAAAACAA-CATTTA-TCTTTCTATCATATACTGATATCTTGAAAA-TTTTATAAGGTTTCTTGTCACATTCAGTATTTAAA----------AAATAGGATTGATTCTAAGTTTTGAGTTTAT-CATGCATTTGAATATTAGAGATATTATCTCTTGTTAATTTCTAAGCTTTGCTGTATTCCAAGCTCAGTCTTGCCT-TATCCTTAGT-AATGGCAATGAAGTGTGGGGATAGAATGTTCACTATTTTTTT-ATGTGCTGTTAAATTTT-CATACCTCATGTGCTATCTTGAAGTCTTATAGTATACGAA---TGAGTGGGGGAGACCAGCATAAAAC-TATTACCCAACTTATGTAGTTTTCACTGGGCAACAG----TATCCTCTGAATGGTGAAATGGCTAC--TTTTTATTTATTTA--TTTTTCTTT-------------CATGGGGC- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79015259 452 + 135778131 ATTTTAGAAACAATCATTTTATGTAGAATGA-------TTTGTGCTAAAACAA-CATTTA-TCTTTCTATCATATACTGATATCTTGAAAA-TTTTATAAGGTTTCTTGTCACATTCAG-ATTTAAA----------AAACAGGATTGATTCTAAGTTTTGAGTTTAT-CATGCATTTGAATATTAGAGATATTATCTCTTGTTCATTTCTAAGCTTTGCTGTATTCCAAGCTCAGTCTTGCCT-TATCCTTAGT-AATGGCAATGAAGTGTGGGGATAAAATGTTCACTATTTTTTT-ATGTGCTGTTAAATTTT-TGTACCTCCTGTGCTATCTTGAAGTCTTATAGTGTAGGAATGGTGAGTAGGGGAGATCAGCATAAAAC-TATTACCCAACTTATCTAGTTTTCACTGGGCAACAG----TATCCTCTGAATGGTGAAATGGCTAC--TTTTTATTTATTTA--TTTTTCTTT-------------CATGGGGC- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2785003 450 - 3013352 ATTTTAGAAACAATCATTTTATGTAGAATGA-------TTTGTGCTAAAACAA-CATTTA-TCTTTCTATCATATACTGATATCTTGAAAA-TTTAATAAGGTTTCTTGTCACATTCAGTATTTAAA----------AAATAGGATTGATTCTAAGTTTTGAGTTTAT-CATGCATTTGAATATTAGAGATATTATCTCTTGTTAATTTCTAAGCTTTGCTGTATTCCAAGCTCAGTCTTGCCT-TATCCTTAGT-AATGGCAATGAAGTGTGGGGATAGAATGTTCACTATTTTTTT-ATGCGCTGTTAAATTTT-CATACCTCATGTGCTATCTTGAAGTCTTATAGTATACTAA---TGAGTGGGGGAGACCAGCATAAAAC-TATTACCCAACTTATGTAGTTTTCACTGGGCAACAG----TATCCTCTGAATGGTGAAATGGCTAC--TTTTTATTTATTTA--TTTTTCTTT-------------CATGGGGC- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6013949 455 + 8656713 ATTTTAGAAACAATCGTTTTTTGTAGAATGA-------TTTGTGCTAAAACAA-CATTTA-TTTTTCTATCATATACTGATATCTTAAAAA-TTTTATAAGATTTCTTGTCACATTCAGTATTTAAA----------AATTAGGATTGATTCTAAGTTTTGAGTTTAT-CATGCATTTGAATATTAGAGATATTATCTCTTATTAATTTCTAGGCTTTGCTGTATTCCAAGCTCAGTCCTGCCT-TATCCTTAGT-AATGGCAATGAAGTGTGGGTATAGAATGTTCACTATTTTTTT-ATGTGCTGTTAAATTTT-CATACCTCCTGTGCTATCTTGAAGTCTTACAGTATAGGAATGGTGAGTGGGGGAGACCAGCATAAAAC-TATTACCTAACTCATGTGGTTTTCACTGGGCAACAG----TATCCTCTGAATGATGAAATGGCTACtttttttttttttttt--tttttcttt-------------CATGGAGC- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129459978 438 - 190850796 ATTTTAGAAAGAATTGTGTTTTGTAGAATGA-------TTTGTACTCAAACAA-TTTATC-TTTTTCTATCATATACTGATATCTTGAAAACTTTTAT---GTTTCTCATCACATTCAGTATTTTA-----------AAATAGGATTGATTCTAAGTGTTGACTTTATGGGTACATTTGAC--------ATATTATCTCTTATCCATTTCAACACTTTGTTGTATTCCAAACTGGGTCTTGCCT-TAGCCTTAGT-AATGGCAATGAAGTGGGGAGATAGAATGTTCACTAGTATTCC-ATGTGCTGTTAAATGTT-CACACCTCCTGTGCTATCTTAAAGTCTTACAGTATAGGAGCAGTGAGTGGAGGAGAGGAGGTTAGCAT-TATTATATAACACATGTAGTTTTCACTGGGCAGTAG----TATCCTCTGAACAGTGAAATGCCTAC--TTTTTAGT--------TTTTTCTTT-------------TGTCGGGCA i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6531532 470 - 25294431 ATTTTAGAAAGAACTGTATTTTGTACAGTGA-------TTTGTACTAAAACAA-TTTATC-TCTTTCTATCATATACTGATATCTTGAAAACTTTTAT---GTTTCTCATCACATTTAGTATTTTAAAAACAGGGTTAAATAGGATTGATTCTAAGTGTTGACTTTATGGGTACATTTGAATATTAGAGATATTATCTCTTATCCATTTCAATGCTTTGTTGCATTCCTAACTGGGTCTTGCCT-TAGCCTTAGC-AATGGCAATGAAGTGGGGAGATCGAATGTTCACTAGTATTCC-ATGTGCTGTTAAATGTT-CACACCTCCTGTGCTATCTTAAAGTCTTACAGTATAGGGGTAGTGAGTGGGGGAGAAGAGCTTAACAC-TGTTATATAACACATGCAGTTTTCACTGGGCAATAG----TATCCTCTGAATGGTGAAATGCCTAC--TTTTTAGT--------TTTTTTTTTTTTTTTTTTCTTATGTTGGGCA i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4086254 453 - 6311556 ATTTTAGAAAGAATTGTATTTTGTAGAATGA-------TTTGTACTAAAACAA-TTTATC-----TCTATCATATACTGATATATTGAAAACTTTTAT---GTTAGTCGTCACATTTAGTATTTTAAAAATAGGGTTAAATAGGATTGATTCGAAGTGTTGACTTTATGGGTACATTTGAATATCAGAGATATTATCTCTTATCCATTTCAACGCTTTGTTGCATTCCAAACTGGGTCTTGCCT-TAGCCTTAGT-AATGGCAATGAAGTGGGGAGGTAGAATGTTCACTAGTATTCC-ATGTGCTGTTAAATGTT-CATACCTCCTGAGCTACCTTAAAGTCTTACAATATAGGAGTAGTGAGTGGGGGAGAGGAGCTTAACAC-TATTATATAACACATGTAGTTTTCACTGGGCAATAG----TATCCTCTGAACGGTGAAATGCCTAC--TTTTTAGT--------TTTTTCTTT-------------TGTTGGGCA i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14942816 457 + 15034901 ATTTTAGAAAGAATTGTATTTTGTAGAATGA-------TTTGTACTAAAACAA-TTTTTC-TCTTTCTATCATATACTGATATCTTGAAAACTTTTAC---ATTTCTCGTCACATTTAGTATTTTAAAAATAGGGTTAAATAGGATTGATTCTAAGTGTTGACTTTATGGGTACATTTGAATATTAGAGATATTATTTCTTATCCATTTCAACACTTTGCTGCATTCCAAACTGGGTCTTGCCT-TAGCCTTAGT-AATGGTAATGAAGTGGGGAGATAGAATTTTCACTAGTATTCC-ATGTGCTGTTAAATGTT-CACAGCTTCTGTGCTATCTTAAAGTCTTACAGTATAGGAGTAGTGAGTGGGGAAGAGGAGCTTAACAC-CATTATATAACACATGTAGTTTTCACTGGGCAATAG----TAACCTCTGAACGGTGAAATGCCTAC--TTTTCAGT--------TTTTTCTTT-------------TGTTGGGCA i aotNan1.NW_018507635v1 C 0 I 1 s canFam3.chr19 44065707 437 - 53741614 ATTTTTGAAGAAGTC-TCTTTTTTCATGTGACTCTCCTTTCATGCTGAAACAA-ACTCTCTTCTTACCCTCACACACTGTTATCTTGAAAA----TAT---GTTTTTAGTCATTTTCAGGTTTTAAG----------ACATAGTATCAGTTCCAAGTTGT-AGTTTAT-GATCCATTTGAATATCAGCAACATTATATTTTATCCAATCCAAAGCTATACTGGGTTCCAAATTCAGTGCTGCCT-CAGCCTAGGCAAATAGCAAAG-------------GAATTTTTACTATTTTTCA-GTTTGTTCTTAAATCTTCCCCGATTTCTGTGCTCTTTCTGGCTCGTACAGGGAAGGAA------CCGGGAGAAAGTTGCACAAAAAGTCTTGTTTAACTCATGTAGTTTTCAATGGGCAAGAA----TGTCCTCTCA--GGCGCAATGTCTAC--TTTT-AGCTCTTAA--GTGGACTGT----------GAATATGTGTC- i canFam3.chr19 I 1055 C 0 s dasNov3.JH569232 1784065 368 + 5974691 ATTTT-----------TATTCATGACTCTCA-------TTTGTGTGAAGACAATTATCTC-ACATCCCCTTCCATAGTGAGACCTTGAAAATATTTACAGGGTTTCTGATCACATTCAGGTTTTAAG----------AACTGATGTCAATTTCAATTTTT-AATTCAT-GATCCATTCCAATACTAAATCTATTATCTTTTACCCAATTC------------------AAGCTTAGTCCTTCATCTATCTAGGGA-AACGGCA--------------------------TATCACCCC-TTA-GCTCTTAAACCTT-CAC-CAGATTCTGCTATCTCTGACTCTTACAAGGCAGAAA-----------------------AAAGG-TCTTGCTTAACTCAT--AATTTTAATTGGGCAATAG----TATCCTCAGGACAGCTTGATAACTAC--TTTTTAGT--------TCTTTGTTT-------------GGTGGGGCA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=37128.000000 s hg38.chr9_KI270719v1_random 65004 3 + 176845 AAA s panTro5.chr4 135089792 3 + 194502333 AAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 70131 3 - 70559 AAA i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90484386 3 - 115148730 AAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426149 3 + 190429646 AAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945155 3 + 189454096 AAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34936919 3 - 40319822 AAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4490874 3 - 9219162 AAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79015711 3 + 135778131 AAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2785453 3 - 3013352 AAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6014404 3 + 8656713 AAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129460417 3 - 190850796 AAA i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6532003 3 - 25294431 AAA i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4086708 3 - 6311556 AAA i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14943274 3 + 15034901 AAA i aotNan1.NW_018507635v1 I 1 C 0 s canFam3.chr19 44066144 3 - 53741614 AAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1784433 3 + 5974691 AAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e tarSyr2.KE944182v1 253573 2124 - 1108378 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=39033.000000 s hg38.chr9_KI270719v1_random 65007 6 + 176845 -TGCTTG----------- s panTro5.chr4 135089795 6 + 194502333 -CGCTTG----------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 70134 6 - 70559 -CGCTTG----------- i gorGor5.CYUI01001450v1 C 0 C 0 s nomLeu3.chr7b 90484389 6 - 115148730 -CGCTTG----------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426152 6 + 190429646 -TACTTG----------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945158 6 + 189454096 -TACTTG----------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34936922 6 - 40319822 -TACTTG----------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4490877 6 - 9219162 -TATTTG----------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79015714 6 + 135778131 -TGCTTG----------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2785456 6 - 3013352 -TACTTG----------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6014407 6 + 8656713 -CGCTTG----------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129460420 6 - 190850796 -TGCTTG----------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532006 6 - 25294431 -TGCTTG----------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4086711 6 - 6311556 -TGCTTG----------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943277 6 + 15034901 -TGCTTG----------- i aotNan1.NW_018507635v1 C 0 C 0 s tarSyr2.KE944182v1 255697 6 - 1108378 -TATTAG----------- i tarSyr2.KE944182v1 I 2124 N 0 s canFam3.chr19 44066147 6 - 53741614 -TGTTAA----------- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1784436 18 + 5974691 TTTTTTGTGGGTTATTAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=3606441.000000 s hg38.chr9_KI270719v1_random 65013 420 + 176845 AAAACTGCACCACTGGGAAATTGC-AGCTATAG-TCCATGTTTCAACATAGTCCATGCTTCTTTGAGTTGGCCACTTAATGTTTACTCTCATCTCCTTAGGTTTA-GCAGT-AAAGACCAGTA-AGATTTCTTCTGTTAGGATCATCTAGCCATTCCAAGCAT--------TTCTCTTAGATTTGATTCTTTCAAGACAAATCAACCCAATAAAAAGCTCATAAATAACAGTGATCTAGCTACCACATTTGATGTTCTCATC--TGACCAAACCAAATTTTATGTATACATTCAATTCTCAATCCAACCTAGTCTGTTTGCCTAAACCATTCCAGACAAACTTCCACTTCGAAGGTTTTAAATGCATAAGTCAGATAGCAATCCTTCAGTTGCCCCAGAGGCACATCACGTTCTTTGAATGCTTCATTATAGTCC s panTro5.chr4 135089801 420 + 194502333 AAAACTGCACCACTGGGAAATTGC-AGCTATAG-TCCATGTTTCAACATAGTCCATGCTTCTTTGAGTTGGCCACTTACTGTTTACTCTCATCTCCTTAGGTTTA-GCAGT-AAAGACCTGTA-AGATTTCTTCTGTTAGGATCATCTAGCCATTCCAAACAT--------TTCTCTTAGATTTGATTCTTTCAAGGCAAATCAACCCAATAAAAATCTCATAAATAATGGTGATCTAGCTGCCACATTTGGTGTTCTCATC--TGATCAAACCAAATTTTATGTATACATTCAATTCTCAATCCAACCCAGTCTGTTTGCCTAAGCCATTCCAGACAAACTTCCACTTCGAAGGTTTTAAATGCATAAGTCAGATAGCAATCCTTCAGTTGCCCCAGAGGCACGTCACGTTCTTTGAATGCTTTATTATAGTCC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01001450v1 70140 419 - 70559 AAAACTGCACCACTGGGAAATTGC-AGCTATAG-TCCATGTTTCAACATAGTCCATGCTTCTTTGAGTTGGCCACTTACTGTTTACTCTCATCTCCTTAGGTTTA-GCAGT-AAAGACCTGTA-AGATTTCTTCTGTTAGGATCATCTAGCCATTCCAAACAT--------TTCTCTTAGATTTGATTCTTTCAAGACAAATCAACCCAATAAAAATCTCAT-AATAACGGTGATCTAGCTACCACATTTGGTGTTCTCATC--TGACCAAACCAAATTTTATGTATACATTCAATTCTCAATCCAACCCAGTCTGTTTGCCTAAGCCATTCCAGACAAACTTCCACTTCGAAGGTTTTAAATGCATAAGTCAGATAGCAATCCTTCAGTTGCCCCAGAGGCACATCACGTTCTTTGAATGCTTCATTATAGTCC i gorGor5.CYUI01001450v1 C 0 N 0 s nomLeu3.chr7b 90484395 400 - 115148730 AAAACTGCACCACTGGGAAATTGC-AGCTATAG-TCCATGT-----------------TTCTTTGAGTTGGCCACTTACTGTTTACTCTCATCTCCTTAGGTTTA-GCAGT-AAAGACCTGTA-AGATTTCTTCTGTTAGGATCATCTAGCCTTTCCAAACAT--------TTCTCTTAGATTTGATTCTTTCAAGACAAATCAACCCAATAAAAATCTAATAAATAACGGTGATCTAGCTACCACATTTGCTGTTCTCATC--TGATCAAGCCAAATTTTATGTATACATTCAATTCTCAGTCCAACCCAGTCTGTTTGCCTATGTCATTCCAGACAAACTTCCACTTCAAAGGTTTTAAG-GCAT--GTCAGATAGCAATCCTTCAGTTGCCCCAGAGGCACGTCACGTTCTTTGAGTGCTTTATTATCGTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426158 419 + 190429646 AAAACTGCACGACT-GGAAACTGC-AACTATAG-TCCATGTTTCAACATAGTCCATGTTTCTTTGAGTTGGCCACTTACTGTTTACTCTCATCTCCTTAGGTTCA-GCAGT-AAAGACATGTA-AGATTTCTTCTGTTAGGATCATCTAGCCATTCCAAACAC--------TTCTCTTAGATTTGATCCTTTCAAGAAAAACCAACCCAACAAAAATCTAATAAATCACAGTGATCTAGCTGCCACATTTGGTGTTCTCATC--TGATCAAACCACATTTTATGTATACATTCAATTCTTAATCCAACCCAGTCTGTTTGCCTAAGTCATTCCAGACAAACTTCCTCTTCGAAGGTTTTAAAGGCATAAGGCAGATATCAATTCTTCAGTTGCCCCAGAGGCACATCACATTCTTTGAGTGCTTTATTATAGTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945164 419 + 189454096 AAAACTGCACGACT-GGAAACTGC-AACTATAG-TCCATGTTTCAACATAGTCCATGTTTCTTTGAGTTGGCCACTTACTGTTTACTCTCATCTCCTTAGGTTCA-GCAGT-AAAGACATGTA-AGATTTCTTCTGTTAGGATCATCTAGCCATTCCAAACAC--------TTCTCTTAGATTTGATCCTTTCAAGAAAAACCAACCCAACAAAAATCTAATAAATCACAGTGATCTAGCTGCCACATTTGGTGTTCTCATC--TGATCAAACCACATTTTATGTATACATTCAATTCTTAATCCAACCCAGTCTGTTTGCCTAAGTCATTCCAGACAAACTTCCTCTTCGAAGGTTTTAAAGGCATAAGGCAGATATCAATTCTTCAGTTGCCCCAGAGGCACATCACATTCTTTGAGTGCTTTATTATAGTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34936928 419 - 40319822 AAAACTGCACAACT-GGGAACTGC-AACTATAG-TCCATGTTTCAACATAGTCCATGTTTCTTTGAGTTGGCCACTTACTGTTTACTCTTATCTCCTTAGGTTCA-TCAGT-AAAGACATGTA-AGATTTCTTCTGTTAGGATCATCTAGCCATTCCAAACAC--------TTCTCTTAGATTTGATCCTTTCAAGAAAAACCAACCCAACAAAAATCTAATAAATCACAGTGATCTAGCTGCCACATTTGGTGTTCTCATC--TGATCAAACCACATTTTATGTATACATTCAATTCTTAATCCAACCCAGTCTGTTTGCCTAAGTCATTCCAGACAAACTTCCTCTTCGAAGGTTTTAAAGGCATAAGGCAGATATCAATTCTTCAGTTGCCCCAGAGGCACATCACATTCTTTGAGTGCTTTATTATAGTCC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4490883 412 - 9219162 AAAACTGCACGACT-GGAAACTGC-AACTATAG-TCCATGTTTCAACATAGTCCATGTTTC-TTGAGTTGGCCACTTACTGTTTACTCTCATCTCCTTAGGTTCA-GCAGT-AAAGACATGTA-AGATTTCTTCTGTTAGGATCATCTAGCCATTCCAAACAC--------TTCTCTTAGATTTGATCCTTTCAAGAAAAACCAACCCAACAAAAATCTAATAAATCACAGTGATCTAGCTACCACATTTGGTGTTCTCATC--TGATCAAACCACATTTTATGTATAC------TTCTTAATCCAACCCAGTCTGTTTGCCTAAGTCATTCCAGACAAACTTCCTCTTCGAAGGTTTTAAAGGCATAAGGCAGATATCAATTCTTCAGTTGCCCCAGAGGCAAGTCACATTCTTTGAGTGCTTTATTATAGTCC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79015720 419 + 135778131 AAAACTGCACGACT-GGAAACTGC-AACTATAG-TCCATGTTTCAACATAGTCCATGTTTCTTTGAGTTGGCCACTTACTGTTTACTCTCATCTCCTTAGGTTCA-GCAGT-AAAAACATGTA-AGCTTTCTTCTGTTAGGATCATCTAGCCATTCCAAACAC--------TTCTCTTAGATTTGATCCTTTCAAGAAAAATCAACCCAATAAAAATCTAATAAATAACGGTGATCTAGCTAACACATTTGGTGTTCTCATC--TGATCAAACCAAATTTTATGTATACATTCAATTCTTAATCCAACCCAGTCTGTTTGCCTAAGTCATTCCAGACAAACTTCCTCTTCGAAGGTTTTAAAGGCATAAGGCAGATATCAATTCTTCAGTTGCCCCAGAGGCAGGTCACATTCTTTGAGTGCTTTATTACAGTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2785462 419 - 3013352 AAAATTGCACAACT-GGAAACTGC-AACTATAG-TCCATGTTTCAACATAGTCCATGTTTCTTTGAGTTGGCCACTTACTGTTTACTCTCATCTCCTTAGGTTCA-GCAGT-AAAGACATGTA-AGATTTCTTCTGTTAGGATCATCTAGCCATTCCAAACAC--------TTCTCTTAGATTTGATCCTTTCAAGAAAAACCAACCCAACAAAAATCTAATAAATCACAGTGATCTAGCTACCACATTTGGTGTTCTCATC--TGATCAAACCACATTTTATGTATACATTCAATTCTTAATCCAACTCAGTCTGTTTGCCTAAGTCATTCCAGACAAACTTCCTCTTCGAAGGTTTTAAAGGCATAAGGCAGATATCAATTCTTCAGTTGCCCCAGAGGCAAGTCACATTCTTTGAGTGCTTTATTATAGTCC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6014413 407 + 8656713 AAAACTGCACGACTAGGAAACTAC-AACTGTAG-TCCATGTTTCAACATAGTCCATGTTTCTTTGAGTTGGCCAC-------TTACCCTCATCTCCTTAGGTTCA-GCAGT-AAAGACATGTA-AGATTTCTTCTGTTAGGATCATCTAGCCATTCCAAACAT--------TTCTCTTAGATTTGATCCTTTCAAGAAAAATCAACCCAATAAAAATCTAATAAATCACGGTGATCTAGCTACCCCATTTGGTGTTCTCATC--TGATCAAACCAAATTTTGTGTATACATTCAATTCTTAATCCAACCCAGTCTGTTTGCCTAAGTCATTCCAGACAAACTTCCTCTTCGAAGGTTTTAAAGGCATAAGGCAGATATCAATTCTTCAGATGCCC------CACGTCACATTCTTTGAGTGCTTTACTATAGTCC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129460426 416 - 190850796 AAAACTACACCACTGGGAAATTGC-AACTATAG-TCCATGTTTCAACACAGTCCATGTTTCTTTGAGTTGGCCACTTATGGTTTACTCTCATCCCCTTAGGATCA-TCAGG-AAAGACCTGTAAAGATTTCTTCCACTGAGCTCATCTAGACATTCCAAACAT--------TTCTCTTAGGTTTGATTCTTTCAAGACAAATCAACCCaataaaaatataataaataaaGGTGACATAGCTATCACATTTGCTGTTCTCTTC--TGATC-----AAATTTAAGGTATATATTCTATTTTCAATCTAACCCAATCTGTTTGCCTAAGCCATTTCACACAAATTTTCATTTCTAAGATTTTAAAGGCATAAGGCGGATATCAATCCTTCAGTTGCCCCAGAGGAACATCTGATTCTTTGAACGCTTTCTTATAGTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532012 416 - 25294431 AAAACTGCACCACTGGGAAATTGCTAACTATAG-TCCATGTTTCAACACAGTCCATGTTTCTTTGAGTTGGCCACTTACTGTTTACTCTCATCCCCTTAGGATCA-CCTGT-AAAGACCTGTAAAGATTTCTTCCACTGAGCTCATCTAGACATTCTGAACAT--------TTCTCTTAGGTTTGATTCTTTCAAGACAAATCAACCCAATGAAAATCTAATAAATAAAGGTGAT-TAGCTATCACATTTGCTCTTTTCTTC--TGATC-----AAATTTAAGGTATATATTCTTTTTTCAATCTAACCCAGTCTGTTTGTCTAAGCCATTCCACATAAACTTCTACTTCGAAGGTTTTAAAGGCATAAGGTGGATATCAATCCTTCAGTTGCCCCAGAGGAATGTCTGATTCTTTGAATGCTTTATTATTATGC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4086717 416 - 6311556 AAAACTGCACCACTGGGAAATTGC-AATTATAG-TCCATGTTTCAACACAGTCCATGTTTCTTTGAGTTAGCCACTTACTGTTTACTCTCATCCCCTTAGCGTCA-TCAGT-AAAGACCTGTAGAGACTTATTCCATTGAGCTCATCTATACATTCCAAACAT--------GTCTCTTAGGTTTGATTCTTTCAAGACAAATCAACCCAATAAAAATCTAATAAATAAAGGTGATCTACCTATCACATTTGCTGTTCTCTTC--TGATC-----AAATTTCAGGTATATATTCTATTTTCAATCTAACCCAGTCTGTTTGCCTAAGCCATTCCACACAAACTTCCACTTCTAAGGCTTTAAAGGCATAAGGCGGATATCAATCCTTCAGTTGCCCCAGAGGAACGTCTGATTCTTTGAATGCTTTATTATAGTTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943283 415 + 15034901 AAAACTGCAACACTGGGAAATTGC-AACTATAG-TCCATGTTTCAACACAGTCCATGTTTCTTTGAGTTGGTCACTTACTGTTTACTCTCACTCCCTTAGGATCA-TCAGT-AAAGACCTGTAAAGATTTCTTCCATTGAGCTCATCTAGACATTCCAAATAT--------TTCTCTTAGGTTTGATTCTTTCAAGACAAATCAACTCAATAAAAATCTAATAAATAAAGGTGATCTAGCTATCACATTTGCTGTTCTCTTC--TGATC------AATTTAAGGTATATATTCTATTTTCAATCTAACCCAGTCTGTTTGCCTAAGTCATTCTACACAAACTTCCACTTCTAAGGTTTTAAAGGCGTAAGGCAGATATCAATCCTTCAGTTGCCCCAGAGGAATGTCTGGTTCTTTGGATGCTTTATTATCGTCC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44066153 372 - 53741614 GAAACTACAGCATCAAGAAACCTC-AACTGTGGTTCCTTGTTTAAAAAAA----ATGCCTCTTTGTATTGGTCCCTTATGGTTTATCA--ATATCCTGATGTTTAGGCAGT-CGAGACTTCTA-ATA-TTCCTCTGTTGGGATTACCTGGTTTTCCCAAACAC--------TTCTTTTAGATTTA----TTTCAAGGCAAATCAAT----------------------------TCCAGCTACCACCTCAAATGTCCTCATCTGTGAACCAGCCAAATCTTGGATATACACACAATTTTCAGTTTGACCCAGTCTGCTTACCTGGGTTATTCCAGAGAAACTT--ACTTTTAAGATTTCA----TATGAGAGAGAGATCAA------ATATGTCTCATAGACATATCACATTTGTTGGGTGCTTCCTCACAGCT- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1784454 376 + 5974691 GAAACTGCACCATGGAGACATGTC-AGCTGTAG-TTCTTTTATAAGCAATGCCCCTCTT---------------CTAACACTTAACTCCTATCCCCTGATGGTCA-TCAATAAAAGACC--CA-AGGATGCTCCTATTATTATCACTTAGTCATTCTAAACACAAAAGAAAGAGAATGAAGCATGTTTCTTTCAAGACATAT----------------------------GGAGTCCAACTGCCATGTCTGGGATCCTCATT--TGACCCAGCCAAATTCTGCATATGCCCCCAATTCTCAATCTAACCCTATCTGCTCAATGAGATCATTCCAGACAAACTCTCACTTTTCAGGTTTTTTA-GCATGAATCAGATG-----CATTAAGT--CCCTCATGGCATATCACATTCTTTGGGTGCTTTATTATAGTGC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=452987.000000 s hg38.chr9_KI270719v1_random 65433 66 + 176845 TCTTCATTTAGCAATC-AGTGAGGC-AATACACTGGCATCATGATCCCTTTTTTTAGGAACTCTGTAC s panTro5.chr4 135090221 66 + 194502333 TCTTCATTTAGCAATC-AGTGAGGC-AATACACTGGCATCATGATCCCTTTTTTTAGGAACTCTGTAC i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90484795 66 - 115148730 TCTTCATTTAGCAATC-AGTGAGGC-AATACACTGGCATCATGATCCCTTTTTTTAGGAACTCTGTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426577 66 + 190429646 CTTTCATTTAGCAATC-AGTGAGGCAAACACACGGGCATCATGATCCC-CTCTTTAGGAGCTCTGTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945583 66 + 189454096 CTTTCATTTAGCAATC-AGTGAGGCAAACACACGGGCATCATGATCCC-CTCTTTAGGAGCTCTGTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937347 66 - 40319822 CTTTCATTTAGCAATC-AGTGAGGCAAACACACGGGCATCATGATCCC-CTCTTTAGGAGCTCTGTAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491295 66 - 9219162 CTTTCATTTAGCAATC-AGTGAGGCAAACACACGGGCATAATGATCCC-CTCTTTAGGAGCTCTGTAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016139 66 + 135778131 CTTTCATTTAGCAATC-AGTGAGGCAAACACACGGGCATCATGATCCC-CTCTTTAGGAGCTCTGTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2785881 66 - 3013352 CTTTCATTTAGCAATC-AGTGAGGCAAACACACGGGCATCATGATCCC-CTCTTTAGGAGCTCTGTAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6014820 66 + 8656713 CCTTCATTTAGCAATC-AGTGAGGCAAACGCACTGGCATCATGATCAT-GTTTTTAGGAACTCTGTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129460842 66 - 190850796 TCTTCACTTAGCAATC-AGTGAGGCAAGCACACTGGCATCATTATCCC-TTTTTTAGGAATTCTCTAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532428 65 - 25294431 TATT-ACTTAGCAATC-AGTGAGGCAAGCACACTGGCATTATTATCCC-TTTTTTAGGAATTCTGTAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087133 66 - 6311556 TCTTCACTTAGCAATC-AGTGAGGCAAGCACAATGGCATCATTATCCC-TTTTTTAGGAATTCTCTAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943698 66 + 15034901 TCTTCACTTAGCAATC-AGTGAGACAAGCACATTGGCATCATTAACAC-TTTTTAAGGAATTCTCTAC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44066525 63 - 53741614 TTTTCGCTTGGCACTCAAGTGAGCCAAGAGCACCTGCATTA----CCT-GTCCAAAGGAATCCTTTTC i canFam3.chr19 C 0 I 2 s dasNov3.JH569232 1784830 65 + 5974691 ATTTCACTTTGCACTC-AGTAGAGTAAGAGCACCCAAATCATTATCCC-TCAGTGGCAATCACTCTA- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26339641 4850 - 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=877538.000000 s hg38.chr9_KI270719v1_random 65499 86 + 176845 AAAATTCCCTTTGAAAATATAAATTTTGGAAATGAGTGATGAGCAAAGGGGTTTCATTAACATTATCACAATCTCTTGATATATCT s panTro5.chr4 135090287 86 + 194502333 AAAATTCCCTTTGAAAATATAAATTTTGGAAATGAGTGATGAGCAAAGGGGTTTCATTAACATTATCACAATCTCTTGATATATCT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90484861 86 - 115148730 AAAATTCCCTTTGAAAATATAAATTTTGGAAATGAGTGATAAGCAAAGGGGTTTCATTAACATTATCACAATCTCCTGATATCTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426643 86 + 190429646 AAAATTCCCTTTGAAAATATAAGTTTTGGAAATGAGTGATGAGCAAAGGGGTTTCGTTAGCATTATCACAATCTCTTGATATATCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945649 86 + 189454096 AAAATTCCCTTTGAAAATATAAGTTTTGGAAATGAGTGATGAGCAAAGGGGTTTCGTTAGCATTATCACAATCTCTTGATATATCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937413 86 - 40319822 AAAATTCCCTTTGAAAATATAAGTTTTGGAAATGAGTGATGAGCAAAGGGGTTTCGTTAGCATTATCACAATCTCTTGATATATCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491361 86 - 9219162 AAAATTCCCTTTGAAAATATAAGTTTTGGAAATGAGTGATGAGCAAAGGGGTTTCGTTAGCATTATCACAATCTCTTGATATATCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016205 86 + 135778131 AAAATTCCCTTTGAAAATATAAGTTTTGGAAATGAGTGATGAGCAAAGGGGTTTTGTTAGCATTATCACGATCTCTTGATATAGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2785947 86 - 3013352 AAAATTCCCTTTGAAAATATAAGTTTTGGAAATGAGTGATGAGCAAAAGGGTTTCGTTAGCATTATCACAATCTCTTGATATATCT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6014886 86 + 8656713 AAAATTCCCTTTGAAAATATAAGTTTTGGAAATGAGTGATGAGCAAAGGGGTTTCATTAGCATTATCACAATCTCTTGATATATCT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129460908 86 - 190850796 AAAATTCCCCGTGAAAATATAAATTCTGGAAATGAGTGATGAGCAAAGTGGTTTCATTAGCATTATCACAATTTCCTGATGTATCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532493 86 - 25294431 AAAATTCCCTGTGAAAATATAAATTCTGGAAATGAGTCATGAGCAAAGTGGTTTAGTTAGCATTATCACAATTTCCTGATGTATCT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087199 86 - 6311556 AAAATTCCCCTTGAAAATATAAATTCTGGAAATGAGCGATGAGCAAAGTGGTTTCATTATCATTATCACAATTTCCTGATGTATCT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943764 86 + 15034901 AAAATTCCCTGTGAAAATATAAATTTTGGAAATGAGTGATGAGCAAAGTGGTTTCATTAGCATTATCACAATTTCCTGATGTATCT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66973647 83 + 93316391 AAAATCCCATTTGAAAATATAAATTCTAGAAATGAGTTATGAGCAAAGAGGTTTCAATAGCATTACC---ATCTCTTGGTATATCT i micMur3.chr14 n 4850 C 0 s canFam3.chr19 44066590 86 - 53741614 AAGAATGTCTTTGAAAACATAACTTCTGGAAATAAGTGACAAGCAGAGGGGTCACAATAGTATTATCACAATCTCCTGGTATATTC i canFam3.chr19 I 2 I 19 s dasNov3.JH569232 1784895 84 + 5974691 AAAAGTCTCTGAAAAAATATAAATTCTGGAAATGAGTGATGAACAAA--GGCCATGATAGTATTATCACAGTCTTTTAATATATCC i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=420170.000000 s hg38.chr9_KI270719v1_random 65585 56 + 176845 --GCTT-GATAATGTAGCACCTATTATTTGGGGCCATTAGGACCTTGGCTGAAATTCTG s panTro5.chr4 135090373 56 + 194502333 --GCTT-GATAATGTAGCACCTATTATTTGGGGCCATTGGGACCTTGGCTGAAATTCTG i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90484947 56 - 115148730 --GCTT-GATAATGTAGCACCTATTATTTGGGGCCATTAGGACCTTGGCTGAAATTCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426729 55 + 190429646 --GCTT-GATAATGCAGCACCTATTA-TTGGGGCCATTAGGACCTTGACTGAAATTCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945735 55 + 189454096 --GCTT-GATAATGCAGCACCTATTA-TTGGGGCCATTAGGACCTTGACTGAAATTCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937499 55 - 40319822 --GCTT-GATAATGCAGCACCTATTA-TTGGGGCCATTAGGACCTTGACTGAAATTCTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491447 55 - 9219162 --GCTT-GATAATGCAGCACCTATTA-CTGGGGCCATTAGGACCTTGACTGAAATTCTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016291 55 + 135778131 --GCTT-GATAATGCAGCACCTATTA-TTGGGGCCATTAGGACCTTGACTGAAATTCTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2786033 55 - 3013352 --GCTT-GATAATGCAGCACCTATTA-TTGGGGCCATTAGGACCTTGACTGAAATTCTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6014972 55 + 8656713 --GCTT-GATAATGCAGCACCTATTA-TTGGGGCCATTAGGACCTTGACTGAAATTCTG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129460994 23 - 190850796 --GCTT----------------------------------GACCTTTGCTGAAATTCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532579 56 - 25294431 --GTTT-GATCATGTAGCACCTATTACTTGGGGCCATTAGGACCTTTGCTGAAATTCTG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087285 56 - 6311556 --GCTT-GATAATGTAGTACCTATTACTTGGGGCCATTAGGACCTTTGCTGAAATTCTG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943850 56 + 15034901 --GCTT-GATATTGTAGCACCTATTACTTGAAGCCATTAGGACCTTTGCTGAAATTCTG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66973730 57 + 93316391 --TCTTTGACAAAGTAGCACCTATTATTTTGGGTCTTTAAGGCCTTTGCTGAAATTCTG i micMur3.chr14 C 0 I 189 s dasNov3.JH569232 1784979 57 + 5974691 TACTTT-GAAAATGTAGCTCTTGTTCTTTCAGGTCTTTAGG-CCTTTGCAGAAATGCTG i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e canFam3.chr19 44066676 19 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=279760.000000 s hg38.chr9_KI270719v1_random 65641 37 + 176845 -GTAAATGTAAAGAAACCACATTTAACATCCAGTTAAT s panTro5.chr4 135090429 37 + 194502333 -GTAAATGTAAAGAAACCACATTTAACATCCAGTTAAT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485003 37 - 115148730 -GTAAATGTAAAGAAGCCACATTTAACATCCAGTTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426784 37 + 190429646 -GTAAAGGTAAAGAAGCCACATTTAATATTCAGTTAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945790 37 + 189454096 -GTAAAGGTAAAGAAGCCACATTTAATATTCAGTTAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937554 37 - 40319822 -GTAAAGGTAAAGAAGCCACATTTAATATTCAGTTAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491502 37 - 9219162 -GTAAAGGTAAAGAAGCCACATTTAATATTCAGTTAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016346 37 + 135778131 -GTAAAGGTAAAGAAGCCACATTTAATATTCAGTTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2786088 37 - 3013352 -GTAAAGGTAAAGAAGCCACATTTAATATTCAGTTAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6015027 37 + 8656713 -GTAAAGGTAAAGAAGCCACATTTAATATTCAGTTAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461017 37 - 190850796 -ATAAATGTAAAGAACTCACATTTAGCATCCAGTTAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532635 37 - 25294431 -ATAAATGTAAAGCACTCACATTTAACATCCAGTTAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087341 37 - 6311556 -ATAAATGTAAAGAACTCACATTTAACATGCAGTTAAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943906 37 + 15034901 -ATAAATATAAAGAACTCACATTTAACATCCAGTTAAT i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1785036 36 + 5974691 AGACAATATAAA-ATGTCACATTTAATAT-CAGTTAAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e canFam3.chr19 44066676 19 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I a score=19512.000000 s hg38.chr9_KI270719v1_random 65678 6 + 176845 ------TTAAtt s panTro5.chr4 135090466 6 + 194502333 ------TTAATT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485040 6 - 115148730 ------TTACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426821 6 + 190429646 ------TTAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945827 6 + 189454096 ------TTAAtt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937591 6 - 40319822 ------TTAAtt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491539 6 - 9219162 ------TTAAtt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016383 6 + 135778131 ------TTAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2786125 6 - 3013352 ------TTAAtt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6015064 6 + 8656713 ------TTAATT i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6532672 6 - 25294431 ------TCAATC i saiBol1.JH378129 C 0 C 0 s dasNov3.JH569232 1785072 11 + 5974691 TCCttattatt- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e canFam3.chr19 44066676 19 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I e aotNan1.NW_018507635v1 14943943 0 + 15034901 C e cebCap1.NW_016107420v1 4087378 0 - 6311556 C e calJac3.chr3 129461054 0 - 190850796 C a score=25457.000000 s hg38.chr9_KI270719v1_random 65684 12 + 176845 tttgt--ttg-tttg s panTro5.chr4 135090472 12 + 194502333 TTTGT--TTG-tttg i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485046 12 - 115148730 TTTGT--TTG-tttg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426827 14 + 190429646 Tttgttgttg-ttgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945833 14 + 189454096 tttgttgttg-ttgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937597 14 - 40319822 tttgttgttg-ttgt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491545 14 - 9219162 tttgttgttg-ttgt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016389 14 + 135778131 TTTGTTGTTG-TTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2786131 14 - 3013352 tttgttgttg-ttgt i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6015070 15 + 8656713 TTTGTTGTTGtttgt i colAng1.NW_012114544v1 C 0 C 0 s dasNov3.JH569232 1785083 12 + 5974691 tttaataatt-ta-- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e canFam3.chr19 44066676 19 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I e aotNan1.NW_018507635v1 14943943 0 + 15034901 C e cebCap1.NW_016107420v1 4087378 0 - 6311556 C e saiBol1.JH378129 6532678 0 - 25294431 C e calJac3.chr3 129461054 0 - 190850796 C a score=609396.000000 s hg38.chr9_KI270719v1_random 65696 166 + 176845 ----tttgttttgtttttgt---------ttttgt----ttttgagacgttgtcttactatgtcacccaggctagagtgcagtggtgtgatctcgactcactgca------acctccacctccaccttctgggttcaagcaattatcttcctcagcctgggattacaggaacccaccaccatgcccacc s panTro5.chr4 135090484 163 + 194502333 ----tttgttt--gttttgt---------ttttgt----ttttgagacgttgtctt-ctctgtcacccaggctagagtgcagtggtgtgatctcgactcactgca------acctccacctccaccttctgggctcaagcaattatcttcctcagcctgggattacaggaacccaccaccatgcccacg i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485058 166 - 115148730 ----tttgttttgtttttgt---------atttgt----ttttgagacattgtcttactctgtcacccaggctggagtgcagtggtgtgatctcgactcactgca------acctccacctccaccttctgggttcaagcaattatcttcctcagcctgggattacaggaacccaccaccatgcccacc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131426841 179 + 190429646 ----tttgtttgttttttgttttgtttcattttgttttgttttgagatgttgtcccactctgtcatccaggctggagtgcagtggtgtaatcttggctcactgca------acctccacctccacctcccgggttcaagcaattctctgcctcagcctgggattacaggaatctgccaccatgcccacc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130945847 179 + 189454096 ----tttgtttgttttttgttttgtttcattttgttttgttttgagatgttgtcccactctgtcatccaggctggagtgcagtggtgtaatcttggctcactgca------acctccacctccacctcccgggttcaagcaattctctgcctcagcctgggattacaggaatctgccaccatgcccacc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937611 179 - 40319822 ----tttgtttgttttttgttttgtttcattttgttttgttttgagatgttgtcccactctgtcatccaggctggagtgcagtggtgtaatcttggctcactgca------acctccacctccaccttccgggttcaagcaattctctgcctcagcctgggattacaggaatctgccaccatgcccacc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491559 179 - 9219162 ----tttgttTGTtttttgttttgcttcattttgttttgttttgagatgttgtcccactctgtcatccaggctggagtgcagtggtgtaatcttggctcgctgca------acctccacctccatctcccgggttcaagcaattctctgcctcagcctgggattacaggaatctgccaccatgcccacc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016403 189 + 135778131 TTGCTTTGTTTGTtttttgttttgtttcattttgttttgttttgagatgttgtctcactctgtcatccaggctggagtgcagtggtgtaatcttggctcactgcaacctccacctccacctccacctcccgggttcaagcaattctctgcctcagcctgggattacaggaatctgacaccatgcccacc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2786145 179 - 3013352 ----tttgttTGTtttttgttttgcttcattttgttttgttttgagatgttgtcccactctgtcatccaggctggagtgcagtggtgtaatcttggctcactgca------acctccacctccacctcccgggttcaagcaattctctgcctcagcctgggattacaggaatctgccaccatgcccacc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6015085 164 + 8656713 ----tttgtttgtt---------------ttttgttttgttttgagatgttgtctcactctgtcctccaggctggagtgcagtggtataatcttggctcactgca------acccccacctccacctcttgggttcaagcaattctctgcctcagcctgggattacaggaatctgccaacatgcccacc i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e dasNov3.JH569232 1785095 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e canFam3.chr19 44066676 19 - 53741614 I e otoGar3.GL873702 964887 2107 - 3201129 I e aotNan1.NW_018507635v1 14943943 0 + 15034901 C e cebCap1.NW_016107420v1 4087378 0 - 6311556 C e saiBol1.JH378129 6532678 0 - 25294431 C e calJac3.chr3 129461054 0 - 190850796 C a score=72549.000000 s hg38.chr9_KI270719v1_random 65862 20 + 176845 taa-ttttgtatttttagtaa s panTro5.chr4 135090647 20 + 194502333 taa-ttttgtatttttagtaa i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485224 20 - 115148730 taa-ttttgtatttttagtaa i nomLeu3.chr7b C 0 I 190 s rheMac8.chr5 131427020 21 + 190429646 taatttttgtatttttagtag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946026 21 + 189454096 taatttttgtatttttagtag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937790 21 - 40319822 taatttttgtatttttagtag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491738 21 - 9219162 taatttttatatttttagtag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016592 21 + 135778131 taatttttgtatttttagtac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2786324 21 - 3013352 taatttttgtatttttagtag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6015249 21 + 8656713 taatttttgtatttttagtag i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44066695 17 - 53741614 TTA-TTTTGAACTTTTAG--- i canFam3.chr19 I 19 C 0 e micMur3.chr14 66973787 189 + 93316391 I e dasNov3.JH569232 1785095 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 964887 2107 - 3201129 I e aotNan1.NW_018507635v1 14943943 0 + 15034901 C e cebCap1.NW_016107420v1 4087378 0 - 6311556 C e saiBol1.JH378129 6532678 0 - 25294431 C e calJac3.chr3 129461054 0 - 190850796 C a score=103804.000000 s hg38.chr9_KI270719v1_random 65882 28 + 176845 agacggggtttcactatcttggtcaggc s panTro5.chr4 135090667 28 + 194502333 agacggggtttcaccatcttggtcaggc i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485434 28 - 115148730 agacggggtttcactgtgttagccagga i nomLeu3.chr7b I 190 C 0 s rheMac8.chr5 131427041 28 + 190429646 agacagggtttcatcatcttggtcaggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946047 28 + 189454096 agacagggtttcatcatcttggtcaggc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937811 28 - 40319822 agacagggtttcatcatcttggtcaggc i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491759 28 - 9219162 agacagggtttcatcatcttggtcaggc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016613 28 + 135778131 agacagcgtttcatcatcttggtcaggc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2786345 28 - 3013352 agacagggtttcatcatcttggtcaggc i manLeu1.NW_012103277v1 C 0 I 3346 s colAng1.NW_012114544v1 6015270 28 + 8656713 agacagggtttcatcatcttggtcaggc i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e dasNov3.JH569232 1785095 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e canFam3.chr19 44066712 0 - 53741614 C e otoGar3.GL873702 964887 2107 - 3201129 I e aotNan1.NW_018507635v1 14943943 0 + 15034901 C e cebCap1.NW_016107420v1 4087378 0 - 6311556 C e saiBol1.JH378129 6532678 0 - 25294431 C e calJac3.chr3 129461054 0 - 190850796 C a score=222731.000000 s hg38.chr9_KI270719v1_random 65910 85 + 176845 tagtcttgaaggcctgacctcgtgatccacctgcctcgacctcccaaagtgctggaa---ttacaggcatgagccaccttgcctggcc s panTro5.chr4 135090695 85 + 194502333 tagtcttgaacgcctcacctcgtgatccacccacttcgacctcccaaagtgctggaa---ttacaggcgtgagccaccttgcctggcc i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485462 85 - 115148730 tggtgttgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctggga---ttacaggcgtgagccaccgcgcctggcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427069 85 + 190429646 cggtattacatgcctaacctcgtgatccacccgcctcaatctctcaaagtgctggga---ttacaggcatgaaccactgtgcctggGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946075 85 + 189454096 cggtattacatgcctaacctcgtgatccacccgcctcaatctctcaaagtgctggga---ttacaggcatgaaccactgtgcctggGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937839 85 - 40319822 cggtattacatgcctaacctcgtgatccacccgcctcaatctctcaaagtgctggga---ttacaggcatgaaccactgtgcctggGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491787 85 - 9219162 cggtattacatgcctaacctcgtgatccacccgcctcaatctctcaaagtgctggga---ttacaggcatgagccactgtgcctggcT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016641 85 + 135778131 cggtattagatgcctaacctcgtgatccacccgcctcaatctctcaaagtgctggga---ttacaggcatgagccactgtgcctggcT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015298 85 + 8656713 cagtattacatgcctaacctcgtgatccacccgcctcgacctctcaaagtgctggga---ttataggcgtgagccactgtgcctggcc i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44066712 56 - 53741614 -GGC-------------------------CCTGGCTAAAATTCTGAGAGAATCGGAAAAGTCACATATACTATCCAATTAAT------ i canFam3.chr19 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e dasNov3.JH569232 1785095 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 964887 2107 - 3201129 I e aotNan1.NW_018507635v1 14943943 0 + 15034901 C e cebCap1.NW_016107420v1 4087378 0 - 6311556 C e saiBol1.JH378129 6532678 0 - 25294431 C e calJac3.chr3 129461054 0 - 190850796 C e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=13326.000000 s hg38.chr9_KI270719v1_random 65995 2 + 176845 TC s panTro5.chr4 135090780 2 + 194502333 TC i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485547 2 - 115148730 TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427154 2 + 190429646 TC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946160 2 + 189454096 TC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937924 2 - 40319822 TC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491872 2 - 9219162 TC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016726 2 + 135778131 TC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015383 2 + 8656713 TC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461054 2 - 190850796 TC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4087378 2 - 6311556 TC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943943 2 + 15034901 TC i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44066768 2 - 53741614 TC i canFam3.chr19 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e dasNov3.JH569232 1785095 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 964887 2107 - 3201129 I e saiBol1.JH378129 6532678 0 - 25294431 C e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=31538.000000 s hg38.chr9_KI270719v1_random 65997 4 + 176845 AATA s panTro5.chr4 135090782 4 + 194502333 AATA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485549 4 - 115148730 AATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427156 4 + 190429646 AATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946162 4 + 189454096 AATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937926 4 - 40319822 AATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491874 4 - 9219162 AATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016728 4 + 135778131 AATA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015385 4 + 8656713 AATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461056 4 - 190850796 AATA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4087380 4 - 6311556 AATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943945 4 + 15034901 AATA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2234116 4 + 3201129 AATA i otoGar3.GL873702 n 2107 C 0 s canFam3.chr19 44066770 4 - 53741614 AGTA i canFam3.chr19 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e dasNov3.JH569232 1785095 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e saiBol1.JH378129 6532678 0 - 25294431 C e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=110537.000000 s hg38.chr9_KI270719v1_random 66001 17 + 176845 TTGTTTTTAATAATTTC s panTro5.chr4 135090786 17 + 194502333 TTGTTTTTAATAATTTC i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485553 17 - 115148730 TTGTTTTTAATAATTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427160 17 + 190429646 TTGTTTTTAATAACTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946166 17 + 189454096 TTGTTTTTAATAAATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937930 17 - 40319822 TTGTTTTTAATAAATTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491878 17 - 9219162 TTGTTTTTAATAAATTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016732 17 + 135778131 TTGGTTTTAATAAATTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015389 17 + 8656713 TTGTTTTTAGTAAATTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461060 17 - 190850796 TTGTCTTTAATAATTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532678 17 - 25294431 TCATTTTTAATAATTTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087384 17 - 6311556 TCATTTTTAATAATTTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943949 17 + 15034901 TCGTTTTTAATAATTTC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2234120 17 + 3201129 TATTATCTCATAATTTA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44066774 17 - 53741614 TCATTTTAAATCATTCA i canFam3.chr19 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e dasNov3.JH569232 1785095 0 + 5974691 C e rhiBie1.NW_016829560v1 945 66546 - 1663 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=1005921.000000 s hg38.chr9_KI270719v1_random 66018 128 + 176845 TGCTTTACTTGCAGTTAATCCTATCAGGCCTTCTACCATACCCAGTTGTGTCAGC---AAGATCTGTACAATGATAAGTAACACA-TGGCTCCCAGGGCTAAACATATTCCTAA-CACTTATATAAACACTTT s panTro5.chr4 135090803 131 + 194502333 TGCTTTACTTGCAGTTAATCCTATCAGGCCGTCTACCATACCCAGTTGTGTCAGCAAGAAGATCTGTACAATGATAAATAACACA-TGGCTCCCAGGGCTAAACATATTCCTAA-CACTTATATAAACACTTT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485570 132 - 115148730 TGCTTTACTTGCAGTTAATCCTATCAGGCTGTCTACCATAACCAGTTGTGTCAGCAAGAAGATCTGTACAATGATATGTAACACATTAGCTCCCAGGGCTAAACATATTCCTGA-CACTTATATAAACACTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427177 131 + 190429646 TGCTTTACTTGCAGTTAATCCTATCAGGCCGTCTACCATATCCAGTTGTGTCATCAAGAAGATCTGTACAGTGATAAGTAATACA-TGGCTCCCAGGGCTAAACATATTCCTGA-CACTTATATAAACAGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946183 131 + 189454096 TGCTTTACTTGCAGTTAATCCTATCAGGCCGTCTACCATATCCAGTTGTGTCATCAAGAAGATCTGTACAGTGATAAGTAATACA-TGGCTCCCAGGGCTAAACATATTCCTGA-CACTTATATAAACAGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34937947 131 - 40319822 TGCTTTACTTGCAGTTAATCCTATCAGGCCGTCTACCATATCCAGTTGTGTCATCAAGAAGATCTGTACAGTGATAAGTAATACA-TGGCTCCCAGGGCTAAACATATTCCTGA-CACTTATATAAACAGTTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4491895 131 - 9219162 TGTTTTACTTGCAGTTAATCCTATCAGTCCGTCTACCATATCCAGTTGTGTCATCAAGAAGATCTGTACAGTGATAAGCAATACA-TGGCTCCCAGGGCTAAACATATTCCTGA-CACTTATATAAACAGTTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016749 131 + 135778131 TGCTTTACTTGAAGTTAATCCTATCAGGCCCTCTACCATATCCAGTTGTGTCATCAAGAAGATCTGTACAGTGATAAGTAATACA-TGGCTCCCAGGGCTAAACATATTCCTGA-CACTTATATAAAGAGTTT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015406 131 + 8656713 TGCTTTACTTGCAGTTAATCCTATCAGGCCGTCTACCATATCCAGTTGTGTCATCAAGAAGATCTGTACAGTGATAAGTAACACA-TGGCTCCCAGGGCTAAACATATTCCTGA-CACTTATATAAACAGTTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461077 127 - 190850796 TGCTTTA-CTGCAGTTAATCCTATCTGGCCGTTTACTACACCCAGTTGTGCTAGT---AAGATCTGTGCAATAATAAGTAACACA-TGGCTCCCAGGACTAAACATATTTCTGA-CACTTATACAAACAGATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532695 131 - 25294431 TGCTTTACCTGCAGTTAATCCTATCCAGCCATTTACTACACCCAGTTGTGTTAGTAAGAAGATCTGTGCAATGATAAGTAACACA-TGGCTCCCAGGGCTAAATATATTTCTGA-CACTTATACAAACAGATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087401 131 - 6311556 TGCTTTACCTGCAGTTAATCCTATCTGGCCATTTACTACACCCAGTTGTGTTAGTAAGAAGATCTGTGCAATGATAAGTAACACG-TGGCTCCCAGGGCTAAACATATTTCTGA-GACTTATAGAAACAGATT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14943966 131 + 15034901 TGCTTTACCTGAAGTTAATCCTATCCGGCCATTTACTACACCCAGTTGTGTTAGTAAGAAGATCTGTGCAATGATAAGTAACACA-TGGGTCCCAGGGCTAAACATATTTCTGA-CACTCATACAAACAGATT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2234137 131 + 3201129 TGCTTTACCTACAGTTAATCATTTCAAGCCATTTCTCACATCCAGTTGTTACAGCAAGAAGGACACTACAGTGACAAGTAGTCAA-TGGCTCCCAGAAGTACAGATATGACTGA-CCTTCGTGCAAGTATTAC i otoGar3.GL873702 C 0 I 5 s canFam3.chr19 44066791 128 - 53741614 TGCATTACCTGTAATTAATCATATGGAGCCATCTACCAGACCCCA--GTGTCAGCAAGAAGGTCTCTATAACTATAAGTAAGGAA-TGGCCACCAGAGCTGAAAATATTGCTGA-CACTTGTGCAATTACTT- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1785095 129 + 5974691 tGCTTTAATGGCAATTAATCATA---GTCCACTTTCCAGACTCAGTAGTGTCAGCAAAATGGCCTCTACTACGATAAGTAGTTAA-TGACTCCCAGAGCTAAAGATATTGCTGAGCCTTTGTAGAAGTATTAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66973787 189 + 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=1420149.000000 s hg38.chr9_KI270719v1_random 66146 169 + 176845 TTCAGAAATTTGACAATATTTTATAATTAAACAATATCTTATTTTACAAGAAAAGATATGGTATCACAATACTCTGAGCAAAGAGTTAATTTGCTTCTCAAATTTCCTAGATAATGAAGTAGTCCTAAAATATTTAACTCAGTATTGGT--AATAG-TTT----CAATTTGAGGAA s panTro5.chr4 135090934 169 + 194502333 TTCAGAAATTTGACAATATTTTATAATTAAACAATATCTTATTTTACAAGAAAAGATATGGTATCACAATACTCTGAGCAAAGAGTTAATTTGCTTCTCAAATTTCCTAGATAATGAAGTAGTCCTAAAATATTTAACTCAGTATTGGT--AATAG-TTT----CAATTTGAGGAA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485702 163 - 115148730 TTCAGAAATTTGACAATATTTTATAATTAAACAATATCTTATTTTACAAGAAAAAG------ATCACAATACTCTGAGCAAAGAGTTAATTTGCTTCTCAAATTTCCTAGAAAATGGCGTAGTCCTAAAATATTTAACTCAGTATTGGT--AATAG-TTT----CACTTTGAGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427308 169 + 190429646 GTCAGAAATTTGACAATATTTTATAATTAAACAATATGTTATTTTACAAGAAAAGATATGGTATCACAATACTCTGAGCAAAGAGGTAATTTGCTTCTCAAACTTCCTAGATAATGAAGTAGTCTTAAAATATTTAACTCAGTATTGGT--AATAG-TTT----CAGTATGAGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946314 169 + 189454096 GTCAGAAATTTGACAATATTTTATAATTAAACAATATGTTATTTTACAAGAAAAGATATGGTATCACAATACTCTGAGCAAAGAGGTAATTTGCTTCTCAAACTTCCTAGATAATGAAGTAGTCTTAAAATATTTAACTCAGTATTGGT--AATAG-TTT----CAGTATGAGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34938078 169 - 40319822 GTCAGAAATTTGACAATATTTTATAATTAAACAATATGTTATTTTACAAGAAAAGATATGGTATCACAATACTCTGAGCAAAGAGGTAATTTGCTTCTCAAACTTCCTAGATAATGAAGTAGTCTTAAAATATTTAACTCAGTATTGGT--AATAG-TTT----CAATATGAGGAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492026 169 - 9219162 GTCAGAAATTTGACAATATTTTATAATTAAACAATATGTTATTTTACAAGAAAAGATATGGTATCACAATACTCTGAGCAAAGAGGTAATTTGCTTCTCAAACTTCCTAGATAATGAAGTAGTCTTAAAATATTTAACTCAATATTGGT--AATAG-TTT----CAATATGAAGAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79016880 169 + 135778131 GTCAGAAATTTGACAATATTTTATAATTAAACAATATGTTATTTTATAAGAAAAGATATGGTATCACAATACTCTGAGCAAACAGGTAATTTGCTTCTCAAACTTTCTAGATAATGAAGTAGTCTTAAAATATTTAACTCAGTATTGGT--AACAG-TTT----CAATATGAGGAA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015537 169 + 8656713 GTCAGAAATTTGACAATATTTTATAATTAAACAATATCTTATTTTACAAGAAAAGATATGGTATCACAATACTCTGAGCAAAGAGTTAATTTGCTTCTCAAACTTCCTAGATAATGAAGTAGTCTTAAAATATTTAACTCAACATTGGT--AATAG-TTT----CAATATGAGGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461204 166 - 190850796 GTCAGAAATTTGACACTATTTCAAAATTAAACAATATCTTATTTTGCAAGAAAAGATATGGCATCACAATAATACAAGC--AGGGTTAATTTGCTTCTCAAATTTCCTAGAAAATGAAGCAGTTCTAAAATATTTAACTCAGTGTTGGT--AATAG-TTT----TA-TTTGAGGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532826 168 - 25294431 GTCAGAAATTTGACACTATTTCAAAATTAAACAATATCTTATTTTGCAAGAAAAGATATGGCATCACAATAATACAAGCAAAGAGTTAATTTGCTTCTCAAATTTCCTAGAAAATGAAGCAGTCCTAAAATATTTAACTCAGTGTTGGT--AACAG-TTT----TA-TTTGAGGCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087532 172 - 6311556 GTCAGAAATTTGACACTATTTCAAAATTAAACAATATCTTATTTTGCAAGAAAAGATATGGCATCACAATAATACAAGCAAAGAGTTAATTTGCTTCTCAAATTTCCTAGAAAATGAAGCAGTCCTAAAATATTTGACTCAGTGTTGGT--AATAG-TTGGTAATA-TTTGAGGCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14944097 168 + 15034901 GTCAGAAATTTGACACTATTTCAAAATTAAACAATATCTTATTTGGCAAGAAAAGATATGGCATCACAATAATACAAGCAAAGAGTTAATTTGCTTCTCAAATTTCCTAGAAAATGAAGCAGTCCTAAAATTTTTAACTCAGTGTTGGT--AATAG-TTT----TA-TTTGAGACA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66973976 169 + 93316391 TTCAAAAAGTTGGCAATATTTTGTAACTACACTATATCTTATTTTACAAGAAAAAATGTAGTACCATGATAGTGTGAGCAAAGAATTAATTTGTATCTCAAATTTCCTAAATAACAAAGTAGTCTTAAAACATTTAACTCAATATTGGT--AATAG-TTT----TTATTTGAGGAA i micMur3.chr14 I 189 I 275 s otoGar3.GL873702 2234273 166 + 3201129 CTTACAAAGTTAGCAATAGTTTGTAACAAAAGTATATCTT-CTTTGCAAG-AAAGCTATGGTATCACGATAGTGTAAAC-AAGAATTAATTTGTGTCTCAAATTTTCTAAGTTACAAA-TAGTCCTAAAACATTTAACTCAACATTGGT--AATAGCTTT----TTATTTGAGAAA i otoGar3.GL873702 I 5 C 0 s canFam3.chr19 44066919 166 - 53741614 --CAGAAA-TCGGCAATATTTTGAAATTAAAGCATATCATGTTTTACAACAAAATATATGGTTCAACAATAGTGTACGCAAAGTATTGATTTTTGCCTCGCATCTTCTAAATAGGGAAGTAGCCTTATCATGTTTAACTCAATATTAGT--AGTAG-TTT----TGATTTGAGGAG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1785224 152 + 5974691 TTCAGAAATATGGAAATATTTTTTTA--AAAAAAGATCATATTTTGCTGGAAAATATATGGAA-----------------AATAATTGATTTGTGCCTTGAATTTCAACACTTATGAAGTATCCATAAAATATTTAACTGAATCTTGACAAAAAAG-TTT----TAACTTGAAGAA i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016829560v1 945 66546 - 1663 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=127223.000000 s hg38.chr9_KI270719v1_random 66315 21 + 176845 GTGTTCTGAAT-------AGCCTTTTTA s panTro5.chr4 135091103 21 + 194502333 GTGTTCTGAAT-------AGCCTTTTTA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485865 21 - 115148730 GGGTTCTGAAT-------AGCCTTTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427477 21 + 190429646 GTGTCGTGAAT-------AGCCTTTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946483 21 + 189454096 GTGTCGTGAAT-------AGCCTTTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34938247 21 - 40319822 GTGTCGTGAAT-------AGCCTTTTTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492195 21 - 9219162 GTGTCCTGAAT-------AGCCTTTTTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017049 21 + 135778131 GTGTCCTGAAT-------AGCCTTTTTA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015706 21 + 8656713 GTGTCCTGAAT-------AGCCTCTTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461370 21 - 190850796 GTATCCTGAAT-------AGTCTTTTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6532994 21 - 25294431 GTATCCTGAAG-------AGCCTTTTTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087704 21 - 6311556 GTATCCTGAAG-------AGCCTTTTTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14944265 21 + 15034901 GTATCCTGAAT-------AGCCTTTTTA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2234439 28 + 3201129 CTGGCATGAATGTGTCACAATCCTTTTA i otoGar3.GL873702 C 0 I 157 s canFam3.chr19 44067085 16 - 53741614 GTAGCCT-----------AACCTCTTA- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1785376 21 + 5974691 CTAGCAAGAGC-------TTCTTTTTTG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66974145 275 + 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=158238.000000 s hg38.chr9_KI270719v1_random 66336 28 + 176845 ---------ATGCTGA-TGTCATAAGATT---------GTGT-T-ACAA s panTro5.chr4 135091124 28 + 194502333 ---------ATGCTGA-TGTCATAAGATT---------GTGT-T-ACAA i panTro5.chr4 C 0 I 2 s nomLeu3.chr7b 90485886 28 - 115148730 ---------AAGCTGA-TGTCGTAAGATT---------GTGT-T-ACAA i nomLeu3.chr7b C 0 I 2 s rheMac8.chr5 131427498 28 + 190429646 ---------ATGCTGA-TGTCATAAGGTT---------GTGT-T-ACAA i rheMac8.chr5 C 0 I 36 s macFas5.chr5 130946504 28 + 189454096 ---------ATGCTGA-TGTCATAAGGTT---------GTGT-T-ACAA i macFas5.chr5 C 0 I 2 s macNem1.NW_012010911v1 34938268 28 - 40319822 ---------ATGCTGA-TGTCATAAGGTT---------GTGT-T-ACAA i macNem1.NW_012010911v1 C 0 I 36 s cerAty1.NW_012000798v1 4492216 28 - 9219162 ---------GTACTGA-TGTCATAAGGTT---------GTGT-T-ACAA i cerAty1.NW_012000798v1 C 0 I 40 s chlSab2.chr7 79017070 28 + 135778131 ---------ATGCTGA-TGTCATAAGGTT---------GTGT-T-ACAA i chlSab2.chr7 C 0 I 39 s colAng1.NW_012114544v1 6015727 28 + 8656713 ---------ATGCTGA-TATCATAAGGTT---------GCGT-T-ACAA i colAng1.NW_012114544v1 C 0 I 36 s calJac3.chr3 129461391 29 - 190850796 ---------ATACTAA-TGTCATAAGCTT---------GTGT-TAAAAA i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6533015 28 - 25294431 ---------ATGCTAA-TGCCATAAGCTT---------GTAT-T-AAAA i saiBol1.JH378129 C 0 I 2 s cebCap1.NW_016107420v1 4087725 28 - 6311556 ---------AGGCTAA-TATCATAAGCTT---------GTAT-T-AAAA i cebCap1.NW_016107420v1 C 0 I 2 s aotNan1.NW_018507635v1 14944286 28 + 15034901 ---------ATACTAC-TGTCATAAGCTT---------GTGT-T-AAAA i aotNan1.NW_018507635v1 C 0 I 43 s canFam3.chr19 44067101 38 - 53741614 ---------GTAGTCA-TGTCACAAGCTTCTTATACCGGTGTGT-GCAA i canFam3.chr19 C 0 I 22 s dasNov3.JH569232 1785397 38 + 5974691 GTGTAAGTCACACAGGCTATCTAAAATTT---------GTGT-A-ACAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66974145 275 + 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 2234467 157 + 3201129 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=8382.000000 s hg38.chr9_KI270719v1_random 66364 5 + 176845 ACACA s panTro5.chr4 135091154 5 + 194502333 ACAGA i panTro5.chr4 I 2 C 0 s nomLeu3.chr7b 90485916 5 - 115148730 ACAGA i nomLeu3.chr7b I 2 C 0 s macFas5.chr5 130946534 5 + 189454096 ACAGA i macFas5.chr5 I 2 C 0 s calJac3.chr3 129461422 5 - 190850796 ACAGA i calJac3.chr3 I 2 C 0 s saiBol1.JH378129 6533045 5 - 25294431 GCAGA i saiBol1.JH378129 I 2 C 0 s cebCap1.NW_016107420v1 4087755 5 - 6311556 ACAGA i cebCap1.NW_016107420v1 I 2 C 0 s canFam3.chr19 44067161 5 - 53741614 ACGTG i canFam3.chr19 I 22 C 0 s dasNov3.JH569232 1785435 5 + 5974691 CCATA i dasNov3.JH569232 C 0 I 573 e micMur3.chr14 66974145 275 + 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 2234467 157 + 3201129 I e aotNan1.NW_018507635v1 14944314 43 + 15034901 I e colAng1.NW_012114544v1 6015755 36 + 8656713 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I e chlSab2.chr7 79017098 39 + 135778131 I e cerAty1.NW_012000798v1 4492244 40 - 9219162 I e macNem1.NW_012010911v1 34938296 36 - 40319822 I e rheMac8.chr5 131427526 36 + 190429646 I a score=8077.000000 s hg38.chr9_KI270719v1_random 66369 10 + 176845 CTTTCATTTA s panTro5.chr4 135091159 10 + 194502333 CTTTCGATTA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485921 10 - 115148730 CTTTGGATTA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130946539 10 + 189454096 CTTCAGATTA i macFas5.chr5 C 0 C 0 s calJac3.chr3 129461427 10 - 190850796 ATTTATATTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533050 10 - 25294431 ATTTGTATTA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087760 10 - 6311556 ATTTGTATTA i cebCap1.NW_016107420v1 C 0 C 0 s canFam3.chr19 44067166 10 - 53741614 TTGGCATTTA i canFam3.chr19 C 0 I 10 e micMur3.chr14 66974145 275 + 93316391 I e dasNov3.JH569232 1785440 573 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e otoGar3.GL873702 2234467 157 + 3201129 I e aotNan1.NW_018507635v1 14944314 43 + 15034901 I e colAng1.NW_012114544v1 6015755 36 + 8656713 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I e chlSab2.chr7 79017098 39 + 135778131 I e cerAty1.NW_012000798v1 4492244 40 - 9219162 I e macNem1.NW_012010911v1 34938296 36 - 40319822 I e rheMac8.chr5 131427526 36 + 190429646 I a score=16783.000000 s hg38.chr9_KI270719v1_random 66379 7 + 176845 AAGACAC s panTro5.chr4 135091169 7 + 194502333 AAGACAC i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485931 7 - 115148730 AAGACGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130946549 7 + 189454096 AAGATGC i macFas5.chr5 C 0 I 1 s calJac3.chr3 129461437 7 - 190850796 AGGATGC i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6533060 7 - 25294431 AAGATGC i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4087770 7 - 6311556 AAGATGC i cebCap1.NW_016107420v1 C 0 I 1 s otoGar3.GL873702 2234624 7 + 3201129 AAGATCC i otoGar3.GL873702 I 157 C 0 s canFam3.chr19 44067186 7 - 53741614 AAGACAC i canFam3.chr19 I 10 C 0 e micMur3.chr14 66974145 275 + 93316391 I e dasNov3.JH569232 1785440 573 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e aotNan1.NW_018507635v1 14944314 43 + 15034901 I e colAng1.NW_012114544v1 6015755 36 + 8656713 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I e chlSab2.chr7 79017098 39 + 135778131 I e cerAty1.NW_012000798v1 4492244 40 - 9219162 I e macNem1.NW_012010911v1 34938296 36 - 40319822 I e rheMac8.chr5 131427526 36 + 190429646 I a score=-1935.000000 s hg38.chr9_KI270719v1_random 66386 3 + 176845 -TTT s panTro5.chr4 135091176 3 + 194502333 -TTT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485938 3 - 115148730 -TTT i nomLeu3.chr7b C 0 I 9 s macFas5.chr5 130946557 2 + 189454096 -TT- i macFas5.chr5 I 1 I 9 s cerAty1.NW_012000798v1 4492284 2 - 9219162 -TT- i cerAty1.NW_012000798v1 I 40 I 1 s calJac3.chr3 129461445 2 - 190850796 -tt- i calJac3.chr3 I 1 I 9 s saiBol1.JH378129 6533068 2 - 25294431 -TT- i saiBol1.JH378129 I 1 I 9 s cebCap1.NW_016107420v1 4087778 2 - 6311556 -TT- i cebCap1.NW_016107420v1 I 1 I 9 s otoGar3.GL873702 2234631 2 + 3201129 -TT- i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44067193 3 - 53741614 ACT- i canFam3.chr19 C 0 C 0 e micMur3.chr14 66974145 275 + 93316391 I e dasNov3.JH569232 1785440 573 + 5974691 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e aotNan1.NW_018507635v1 14944314 43 + 15034901 I e colAng1.NW_012114544v1 6015755 36 + 8656713 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I e chlSab2.chr7 79017098 39 + 135778131 I e macNem1.NW_012010911v1 34938296 36 - 40319822 I e rheMac8.chr5 131427526 36 + 190429646 I a score=25669.000000 s hg38.chr9_KI270719v1_random 66389 3 + 176845 ATT s panTro5.chr4 135091179 3 + 194502333 ATT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485950 3 - 115148730 ATT i nomLeu3.chr7b I 9 C 0 s rheMac8.chr5 131427562 3 + 190429646 ATT i rheMac8.chr5 I 36 C 0 s macFas5.chr5 130946568 3 + 189454096 ATT i macFas5.chr5 I 9 C 0 s macNem1.NW_012010911v1 34938332 3 - 40319822 ATT i macNem1.NW_012010911v1 I 36 C 0 s cerAty1.NW_012000798v1 4492287 3 - 9219162 ATT i cerAty1.NW_012000798v1 I 1 C 0 s colAng1.NW_012114544v1 6015791 3 + 8656713 ATT i colAng1.NW_012114544v1 I 36 C 0 s calJac3.chr3 129461456 3 - 190850796 att i calJac3.chr3 I 9 C 0 s saiBol1.JH378129 6533079 3 - 25294431 att i saiBol1.JH378129 I 9 C 0 s cebCap1.NW_016107420v1 4087789 3 - 6311556 ATT i cebCap1.NW_016107420v1 I 9 C 0 s aotNan1.NW_018507635v1 14944357 3 + 15034901 ATT i aotNan1.NW_018507635v1 I 43 C 0 s otoGar3.GL873702 2234634 3 + 3201129 ATT i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44067196 3 - 53741614 ATT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786013 3 + 5974691 ATA i dasNov3.JH569232 I 573 C 0 e micMur3.chr14 66974145 275 + 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I e chlSab2.chr7 79017098 39 + 135778131 I a score=10920.000000 s hg38.chr9_KI270719v1_random 66392 1 + 176845 T s panTro5.chr4 135091182 1 + 194502333 T i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485953 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427565 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946571 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34938335 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492290 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017137 1 + 135778131 T i chlSab2.chr7 I 39 C 0 s colAng1.NW_012114544v1 6015794 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461459 1 - 190850796 t i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533082 1 - 25294431 t i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087792 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14944360 1 + 15034901 T i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2234637 1 + 3201129 T i otoGar3.GL873702 C 0 I 7 s canFam3.chr19 44067199 1 - 53741614 T i canFam3.chr19 C 0 I 165 s dasNov3.JH569232 1786016 1 + 5974691 T i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66974145 275 + 93316391 I e rhiBie1.NW_016829560v1 945 66546 - 1663 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=32744.000000 s hg38.chr9_KI270719v1_random 66393 4 + 176845 -TTAA s panTro5.chr4 135091183 4 + 194502333 -TTAA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485954 4 - 115148730 -TTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427566 4 + 190429646 -TTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946572 4 + 189454096 -TTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34938336 4 - 40319822 -TTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492291 4 - 9219162 -TTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017138 4 + 135778131 -TTAA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015795 4 + 8656713 -TTAA i colAng1.NW_012114544v1 C 0 C 0 s rhiBie1.NW_016806351v1 1237537 4 - 1973658 -TTAA i rhiBie1.NW_016806351v1 I 66546 I 674 s calJac3.chr3 129461460 4 - 190850796 -ttaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533083 4 - 25294431 -ttaa i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087793 4 - 6311556 -TTAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14944361 4 + 15034901 -TTAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2234645 4 + 3201129 -TTAA i otoGar3.GL873702 I 7 C 0 s canFam3.chr19 44067365 4 - 53741614 -tcat i canFam3.chr19 I 165 I 6 s dasNov3.JH569232 1786017 4 + 5974691 TTTA- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66974145 275 + 93316391 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=408965.000000 s hg38.chr9_KI270719v1_random 66397 73 + 176845 TTTTGTTCTAAAaaat-------------aaaattatatat------------------aaatacacatgcatcctaaac------------tatat-----atgtata-----atatacatatat s panTro5.chr4 135091187 73 + 194502333 TTTTGTTCTAAAaaat-------------aaaattacatat------------------aaatacacatgtatcctaaac------------tatat-----atgtata-----atatacatatat i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90485958 66 - 115148730 TTTTGTTCTAAAAAAT-------------AAAATtatatat------------------aaatacacatgtatcctaaac------------tatat-----------------atatacatatat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427570 71 + 190429646 TTTTGTTCTAAAacat-------------aaaatt--atat------------------aaatacacatgtatcataaac------------tatat-----gtgtgta-----atatacatatac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946576 71 + 189454096 TTTTGTTCTAAAacat-------------aaaatt--atat------------------aaatacacatgtatcataaac------------tatat-----gtgtgta-----atatacatatac i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34938340 71 - 40319822 TTTTGTTCTAAAACAT-------------AAAATt--atat------------------aaatacacatgtatcataaac------------tatat-----gtgtgta-----atatacatatac i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492295 71 - 9219162 TTTTGTTCTAAAACAT-------------AAAATt--atat------------------aaatacacatgtatcataaac------------tatat-----gtgtgta-----atatacatatac i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017142 71 + 135778131 TTTTGTTTTAAAacat-------------aaaatt--atat------------------aaatacacatgtatcataaac------------tatat-----gtgtgta-----atatacatatac i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015799 71 + 8656713 TGTTGTTCTAAAAGAT-------------AAAATt--atat------------------aaatacacaagtatcataaac------------tgtat-----gtgtgta-----atatacatatac i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461464 72 - 190850796 ctttgttcttaaaaat-------------aaaattatatGT------------------AAATACATGTGTATCATAAAC------------T-TGT-----ATGTATA-----ATATACATACAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533087 70 - 25294431 -tttattcttaaaaat--------------GAATtacatgt------------------aaatacacatgtatcataaac------------t-tat-----atgtata-----atatacatacat i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087797 71 - 6311556 CTTTGTTCTTAAAAAT--------------GAATtatatgt------------------aaatacacatgtatcataaac------------t-tat-----atgtata-----atatacatacat i cebCap1.NW_016107420v1 C 0 I 47 s aotNan1.NW_018507635v1 14944365 72 + 15034901 CTTTGTTCTTAAAAAT-------------AAAATtatatgt------------------aaatacacatatatcataaac------------t-tat-----atgtata-----atatacatacat i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2234649 84 + 3201129 TTTTTTTCTGAAA-AT-------------AACATT-----T------------------AAATACAGAAGCATCATAAATACAGATAATAAATACATACAAGATATATA-----ATATACATATAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44067375 102 - 53741614 tctctctcgaatagataaataaaatcttaaaaaTT--ATATTATGCTCTTCAAATCAAGTAatgcatatatatattatat------------aatat-----atgcctg-----atatgtatgtat i canFam3.chr19 I 6 C 0 s dasNov3.JH569232 1786021 76 + 5974691 CTTTGTTCTTTAAAAT-------------TGGAAA--ATGC------------------ATGTATTAATGCAGAAAATAT------------TATAT-----Gcatacacgcacgcacacacacac i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66974145 275 + 93316391 I e rhiBie1.NW_016806351v1 1237541 674 - 1973658 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=-10242.000000 s hg38.chr9_KI270719v1_random 66470 28 + 176845 gta-------------------tatatataCACACagagagagagag---- s panTro5.chr4 135091260 28 + 194502333 gta-------------------tatatataCACACagagagagagag---- i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486024 28 - 115148730 gta-------------------tatatataCACACACATagagagag---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427641 42 + 190429646 atatatatatgtgtgtg-----tatatatatacacacacacacacac---- i rheMac8.chr5 C 0 I 4 s macFas5.chr5 130946647 42 + 189454096 atatatatatgtgtgtg-----tatatatatacacacacacacacac---- i macFas5.chr5 C 0 I 4 s macNem1.NW_012010911v1 34938411 44 - 40319822 atatatatatgtgtgtgta---tatatatatacacacacacacacac---- i macNem1.NW_012010911v1 C 0 I 4 s cerAty1.NW_012000798v1 4492366 38 - 9219162 atatatatatgtg---------tatacacacacacacacacacacac---- i cerAty1.NW_012000798v1 C 0 I 4 s chlSab2.chr7 79017213 36 + 135778131 atatatatgtg-----------tatatatagacacacacacataCag---- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6015870 32 + 8656713 atatgtatacatg---------tatatataCACACACACAC---------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461536 12 - 190850796 -----------------------------------ATAGAGAGAGCG---- i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6533157 12 - 25294431 -----------------------------------atagagagagag---- i saiBol1.JH378129 C 0 I 2 s aotNan1.NW_018507635v1 14944437 12 + 15034901 -----------------------------------ataGagagagag---- i aotNan1.NW_018507635v1 C 0 I 2 s otoGar3.GL873702 2234733 26 + 3201129 ------------------GTACTATGCATTATTGC---GAGAGAGAG---- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44067477 23 - 53741614 --------------------aatatatgtacatttgtatgAAG-------- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786097 28 + 5974691 -----------------------acacacacacacacacacacacaTATAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66974145 275 + 93316391 I e rhiBie1.NW_016806351v1 1237541 674 - 1973658 I e cebCap1.NW_016107420v1 4087868 47 - 6311556 I e manLeu1.NW_012103277v1 2786373 3346 - 3013352 I a score=127368.000000 s hg38.chr9_KI270719v1_random 66498 29 + 176845 agagaaggagagagaaacagagacaaaga s panTro5.chr4 135091288 26 + 194502333 ag---aggagagagaaacagagacaaaga i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486052 27 - 115148730 ag--agagaaggagagacagagacaaaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427687 29 + 190429646 agagaaggagagagagacagagacaaaga i rheMac8.chr5 I 4 C 0 s macFas5.chr5 130946693 29 + 189454096 agagaaggagagagagacagagacaaaga i macFas5.chr5 I 4 C 0 s macNem1.NW_012010911v1 34938459 29 - 40319822 agagaaggagagagagacagagacaaaga i macNem1.NW_012010911v1 I 4 C 0 s cerAty1.NW_012000798v1 4492408 29 - 9219162 agagaaggagagagagacagagacaaaga i cerAty1.NW_012000798v1 I 4 C 0 s chlSab2.chr7 79017249 29 + 135778131 agagaaggagagagagacagagacaaaga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789719 29 - 3013352 agagaaggagagagagacagagacaaaaa i manLeu1.NW_012103277v1 I 3346 C 0 s colAng1.NW_012114544v1 6015902 29 + 8656713 agagaaggagagagagacagagacaaaga i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461550 23 - 190850796 AGAG------AGACAGGCAGACATACAGA i calJac3.chr3 I 2 I 4 s saiBol1.JH378129 6533171 29 - 25294431 agagagagacagacagacagacatacaga i saiBol1.JH378129 I 2 I 4 s aotNan1.NW_018507635v1 14944451 29 + 15034901 agagagagacagacagacagacatacaga i aotNan1.NW_018507635v1 I 2 I 4 s otoGar3.GL873702 2234759 11 + 3201129 ------------------GGAGGTGAAGA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44067500 10 - 53741614 ------------------AGAGACAAAG- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786125 17 + 5974691 ----------ATATATGAAGAGAGAAG-- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66974145 275 + 93316391 I e rhiBie1.NW_016806351v1 1237541 674 - 1973658 I e cebCap1.NW_016107420v1 4087868 47 - 6311556 I a score=98200.000000 s hg38.chr9_KI270719v1_random 66527 12 + 176845 gagCCATAAATC s panTro5.chr4 135091314 12 + 194502333 gagCCATAAATC i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486079 12 - 115148730 gagTCATAAATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427716 12 + 190429646 gagTCATAAATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946722 12 + 189454096 gagTCATAAATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34938488 12 - 40319822 gagTCATAAATC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492437 12 - 9219162 gagTCATAAATC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017278 12 + 135778131 gagTCATAAATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789748 12 - 3013352 gagTCATAAATC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6015931 12 + 8656713 gagTAATAAATC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461577 12 - 190850796 GAGTCATAAGTC i calJac3.chr3 I 4 C 0 s saiBol1.JH378129 6533204 12 - 25294431 gagTCATAAATC i saiBol1.JH378129 I 4 C 0 s cebCap1.NW_016107420v1 4087915 12 - 6311556 GAGTTAAAAATC i cebCap1.NW_016107420v1 I 47 C 0 s aotNan1.NW_018507635v1 14944484 12 + 15034901 gaGCCATAAATC i aotNan1.NW_018507635v1 I 4 C 0 s otoGar3.GL873702 2234770 12 + 3201129 AAGTCACACCTT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44067510 8 - 53741614 ---TCTCAATT- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786142 12 + 5974691 GAGTCATACATT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66974145 275 + 93316391 I e rhiBie1.NW_016806351v1 1237541 674 - 1973658 I a score=562338.000000 s hg38.chr9_KI270719v1_random 66539 52 + 176845 C------TGAATTTGTTGTTGTCAGTGGTGTTTGATAGCATC----------ACTTTGTAACTCAATA s panTro5.chr4 135091326 52 + 194502333 C------TGAATTTGTTGTTGTCAATGGTGTTTGATAGCATC----------ACTTTGTAACTCAATA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486091 52 - 115148730 C------TGAATTTGTTGTTGTCAATGGTGTTTGATAGCATC----------ACCTTGTAACTCAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427728 52 + 190429646 C------TGAATTTGTTGTTGTCAATGGTGTTTGATAGCATC----------ACCTTGTAACTCAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946734 52 + 189454096 C------TGAATTTGTTGTTGTCAATGGTGTTTGATAGCATC----------ACCTTGTAACTCAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34938500 52 - 40319822 C------TGAATTTGTTGTTGTCAATGGTGTTTGATAGCATC----------ACCTTGTAACTCAATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492449 58 - 9219162 CTGAATTTGAATTTGTTGTTGTCAATGGTGTTTGATAGCATC----------ACCTTGTAACTTAATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017290 52 + 135778131 C------TGAATTTGTTGTTGTCAATGGTGTTTGATAGCATC----------ACCTTGTAACTCAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789760 58 - 3013352 CTGAATTTGAATTTGTTGTTGTCAATGGTGTTTGATAGCATC----------ACCTTGTAACTTAATA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6015943 52 + 8656713 C------TGAATTTGTTGTTGTCAATGGTGCTTGATAGCATC----------ACCTTGTAACTCAATA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461589 52 - 190850796 C------TGAATTTCTTGTTGGCAATGGTGTTTGATAGCATC----------ACCTTGTGACTCAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533216 52 - 25294431 C------TGAATTTCTTATTGGCAATGGTATTTGATAGCATC----------ATCTTGTAACTCAATA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087927 52 - 6311556 C------TGAATTTCTTGTTGGCAATGGTGTTTGATAGCATC----------ACCTTGTAACTCAATA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14944496 52 + 15034901 C------TGAATTTCTTGTTGGCAATGGTGTTTGATAGCATC----------ACCTTGTAACTCAATA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66974420 52 + 93316391 C------TGAATTGCTTGTTGGCATTGGTGTTTGATAGCATC----------ACCTTGTAACTCAATA i micMur3.chr14 I 275 I 23 s otoGar3.GL873702 2234782 52 + 3201129 C------TGAAGTGCTAGTTGTCAGTGGTGTTTGGTAGCATC----------ACTTTGTAACTCAATA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44067518 51 - 53741614 C------TGAATGTCTTATCAT-AATGGTTTTGGCTAACATA----------ACCTTGTAATTAAGCA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786154 61 + 5974691 ------TTGAATTGCTTGTCAGCAATGGTATT-GATAGCCTCTGTTCTTAGGACTCTGTAATTTAATA i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016806351v1 1237541 674 - 1973658 I a score=58124.000000 s hg38.chr9_KI270719v1_random 66591 6 + 176845 GGATGT s panTro5.chr4 135091378 6 + 194502333 GGATGT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486143 6 - 115148730 GGATGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427780 6 + 190429646 GGATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946786 6 + 189454096 GGATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34938552 6 - 40319822 GGGTAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492507 6 - 9219162 GGATAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017342 6 + 135778131 GGATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789818 6 - 3013352 GGATAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6015995 6 + 8656713 GGATAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461641 6 - 190850796 GGATGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533268 6 - 25294431 GAATGT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087979 6 - 6311556 GGATGT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14944548 6 + 15034901 GGATGT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2234834 6 + 3201129 AGATGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44067569 6 - 53741614 GGATAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786215 6 + 5974691 GGACAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66974472 23 + 93316391 I e rhiBie1.NW_016806351v1 1237541 674 - 1973658 I a score=4035729.000000 s hg38.chr9_KI270719v1_random 66597 360 + 176845 ATCTGCACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTGTA-TCTTGTTGATGTCTATAGAGAAAATAAATCACCCTCTAAAGA-ACGGTTTATAAATAA-ATAATTGATATCTGAAAATTCAGAAAAAAataccactatcattttacttaccatattgcattgaaattatatgtttatgcttctcttgcttctacctctctgtgaattcaaggttagaaaaggagaa-------atttttatcttagcattcccaggaccaatcacaatatctaatacttagagcatgcaataaatgttggttgaactaaaataaatCTGATATAAAAACAAATAATGCTTTAGGGAAGTGATTTTTCAT s panTro5.chr4 135091384 359 + 194502333 ATCTGCACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTGTA-TCTTGTTGATGTCTATAGAGAAAATAAATCACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCGGAAAATTCAG-AAAAAGtaccactatcattttacgtaccatattgcattgaaattatatgtttatgcttctcttgcttctacctctctgtgaattcaaggttagaaaaggagaa-------aattttatcttagcattcccaggaccaatcacaatatctaatacttagagcatgcaataaatgttggttgaactgaaataaatCTGATATAAAAACAAATAATGCTTTAGGGAAGTGATTTTTCAT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486149 359 - 115148730 ACCTGCACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTATA-TCTTGTTGATGTCTATAGAGAAAATAAATCACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-AAAAAataccactatcattttatttaccatattgcattgaaattatatgtttatgcttctcttgcttctatcactctatgaattcaaagttagaaaaggagaa-------atttttatcttagcattcccagaaccaatcacaatatctaatacttagagtatgcaataaatgttggttgaactgaaataaatCTGATATAAAAACAAATAATGCTTTAGGGAAGTGATCTTTCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131427786 358 + 190429646 ATCTGTACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTATA-TCTTGGTGATGTCTATAGACAAAATAAATTACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-GAAAAGTTCCActatcattttatttaccatattgcattgaaattatatgtttatgcttctcttgcttctacctctttgtgaattcaaggttagaaaaggagaa-------atttttatcttagcattcccaggaccaatcacaatatctaatacttagagtatgcaataaatgttggttgaactgaaataaatCTGATAT-AAAACAAATAATGCTTTAGGGAAGTAATCTTTCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130946792 358 + 189454096 ATCTGTACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTATA-TCTTGGTGATGTCTATAGACAAAATAAATTACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-GAAAAGTTCCACTATCATTTTATTTACCATATTGCATTGAAATTATATGTTTATGCTTCTCTTGCTTCTACCTCTTTGTGAATTCAAGGTTAGAAAAGGAGAA-------ATTTTTATCTTAGCATTCCCAGGACCAATCACAATATCTAATACTTAGAGTATGCAATAAATGTTGGTTGAACTGAAATAAATCTGATAT-AAAACAAATAATGCTTTAGGGAAGTAATCTTTCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34938558 358 - 40319822 ATCTGTACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTATA-TCTTGGTGATGTCTATAGACAAAATAAATTACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-GAAAAGTTCCActatcattttatttaccatattgcattgaaattatatgtttatgcttctcttgcttctacctctttgtgaattcaaggttagaaaaggagaa-------atttttatcttagcattcccaggaccaatcacaatatctaatacttagagtatgcaataaatgttggttgaactgaaataaatCTGATAT-AAAACAAATAATGCTTTAGGGAAGTAATCTTTCAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492513 358 - 9219162 ATCTGTACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTATA-TCTTGGTGATGTCTATAGACAAAATAAATTACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-AAAAAGTTCCActatcattttatttaccatattgcattgaaattatatgtttatgcttctcttgcttctacctctttgtgaattcaaggttagaaaaggagaa-------atttttatcttagcattcccaggaccaatcacaatatctaatacttagagtatgcaataaatgttggttgaactgaaataaatCTGATAT-AAAACAAATAATGCTTTAGGGAAGTAATCTTTCAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017348 358 + 135778131 ATCTGTACAAAGCTAAAATTAATTTATTTTTGTCATACAAGGCAAGTATA-TGTTGGTGATGTCTATAGAGAAAATAAATTACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-AAAAAGTTCCACTATCATTTTATTTACCATATTGGATTGAAATTATATGTTTATGCTTCTCTTGCTTCTACCTCTTTGTGAATTCAAGGTTAGAAAAGGAGAA-------ATTTTTATCTTAGCATTCCCAGGACCAATCACAATATCTATTACTTAGAGTATGCAATAAATGTTGGTTGAACTGAAATAAATCTGATAT-AAAACAAATAATGTTTTAGGGAAGTGATCTTTCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2789824 358 - 3013352 ATCTGTACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTATA-TCTTGGTGATGTCTATAGACAAAATAAATTACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-AAAAAGttccattatcattttatttaccatattgcattgaaattatatgtttatgcttctcttgcttctacctctttgtgaattcaaggttagaaaaggagaa-------atttttatcttagcattcccaggaccaatcacaatatctaatacttagagtatgcaataaatgttggttgaactgaaataaatCTGATAT-AAAACAAATAATGCTTTAGGGAAGTAATCTTTCAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6016001 358 + 8656713 ATCTGCACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTATA-TCTTGGTGATGTCTACAGAGAAAATAAATTACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-AAAAAGTTCCActatcattttatttaccatattgcattgaaattatatgtttatgcttctcttgcttctacttctttgtgaattcaaggttagaaaaggagaa-------atttttatcttagcattcccgggaccaatcacaatgtctaatacttagagtatgcaataaatgttggttgaactgaaataaatCTGATAC-AAAACAAATAATGCTTTAGGGAAGTGATCTTTCAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129461647 359 - 190850796 AGTTGCACAAAACTAAAATTAATTGATTTTTGCCATACAAGGCAAGAATA-TCTTGTTGATGTCTATAGAGAAAATAAATCACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-AAAAtgtaccactatcattttatttaccatattgcattgaaattatatgtttatacttctcttgcttctactgctctgtgaattcaaggttaaaaagggagaa-------ctttttatcttagcgttcccaggaccaatcacaatatctaatacttagagtatgcaataaatgtttgttgaactgaaataaatCTGATATAAAAACAAATAATGCTTTAGAGAAGTGATCTTTCAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533274 359 - 25294431 AGTTGCAAAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTATG-TCTTGTTGATGTCTATAGAGAAAATAAATCACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGCTATCTGAAAACTCAG-AAAAGGtactgctatcattttatttaccatattgcattgaaattatatgtttatacttctcttgcttctacctctctgtgaattcaaggttaaaaagggagaa-------atttttatcttagcattcccaggaccaattacaatatctaatacttagagtatgcgataaatgtttgttgaactgaaataaatCCGATATAAAAACAAATAATGCTTTAGAGAAGTGATCTTTCAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4087985 359 - 6311556 AGTTGCACAAAGCTAAAATTAATTTATTTTTGCCATACAAGGCAAGTATA-TCGTGTTGATGTCTACAGAGAAAATAAATCACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCTGAAAACTCAG-AAAAGGtaccactatcattttatttaccatattgcattgaaattatatgtttatacttctcttgcttctacctctctgtgaattcaaggttaaaaagggagaa-------atttttatcttagcattcccaggaccagttacaatatctaatacttagagtatgcaataaatgtttgttgaactgaaataaatCTGTTATAAAAACAAATAATGCTTTAGAGAAGTGATCTTTCAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14944554 359 + 15034901 AGTTGCACAAAGCTAAAATTAATTTATTCTTGTCATACAAGGCAAGTATA-TCTTGTTGATGTCTATAGAGAAAATAAATCACCCTCTAAAGA-ACTGTTTATAAATAA-ATAATTGATATCCAAAAACTCAG-AAAAGGtaccactatcattttatttaccatattgcattgaaattatatgtttacacttctcttgcttctacctctctgtgaattcaaggttagaaagggagaa-------atttttatcttagcattcccaagaccaatcacaatatctaatacttggagtatgcaataaatgtttgttgaactgaaataaatCTGATATAAAAAGAAATAATGCTTTAGAGAACTGATCTTTCAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66974495 358 + 93316391 ATCTTCACAAGGCTACAATTAATTTATTTTTACCAAACAAGGCAAGTGGA-TCTTGTTGATGTCTATAGAGATAATAAATTACCCTCTAAAGA-ATTGCTTATAGATAA-ATAATTGATATTTGAAAGCTCAG-AAAAAGTAccactatcatttcatttactata-tgcattgaaattatatgtttatacttcacttgcttccattactctgtgaattcaaggttagaaaaggagaa-------atttttaccttagcaatctcagagctagtcaaaacatctagtacttatagtattcaataaatgtttgttgaactgaactaaatCTGATATAAAAACAAATATTGCTTTGGGAAAATGATGTTTCAT i micMur3.chr14 I 23 C 0 s otoGar3.GL873702 2234840 350 + 3201129 GTCGTCACAAAGCTACAATTGAATTATTTTTACCAAACAAGGCAAGCAGA-TCTTGTTGATGTCTATAAAGAAAATAAATTACCCTTTAAACA-ACAGCTGATAAATAA-ATAATTGACATCTGAAAACTCAG---AAAGtaccactatcatttcatttaccatactggattgaaattagacgtttatgcttctcttgattctattatcctgtgaattcaaatttag----ggggat-------atttttatcttagcaatcccagagcaagtcacaacatctagtacctgcagtattcaataaatg-ctgatgaactgaaataaatCTGATATAAAACCAA--ATTGCCTTGGGGAAATAATGCTTCAT i otoGar3.GL873702 C 0 I 102 s canFam3.chr19 44067575 353 - 53741614 GTCTGCACAAAGCTATAATTAATTTATTTTTACCAAACAGGGCAAATAGATTCTTGTTGATGTCTATGGAGAAAACTGATCACTCTTTAAGGA-ACTGTTTATAAGTAA-AAAATTGGTATCTGAAAATTAAG-AAAAAGtactattattgtgttatttatcatatttcattgaaagtacatgtctaagcttctctgtcctccattacac--tgagttcaaggtaaagaagggagaa-------att-----cttagcattaccaggatgaatcacaatattttgaacctacagaattcaataaatgttcattgaatttaactgaatTTTATATAAAAACAAATATTGGTTTGGGGAAATGCTGTTTCAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786221 364 + 5974691 GTCTGCACAAAGCTAAAATTAATTTAATTTTACAAATCAAAGCTAAGAGATTCTTCTTGATGTCTATAGAGAAAATTAGTCATCCTCTAAAAACATTGCTTCTAAAAAATGTAATTGATATCCGAAAACTTAG-ATAAAGTGCTATCAT----TTATTTACCATATTTCATTAGATTCACAtgtttatgcttttctctcctccattactatgtgtgttcatggccaggaagggggaggggatttatttttatattaggaatcccagtaccaatcacagtatctggaattttgagtattcactaaatgcttgtagaatTGAACTGCATATGATATGAAAACAAATATTGC-TTGGGGAAATCATCTTTCAT i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016806351v1 1237541 674 - 1973658 I a score=1011521.000000 s hg38.chr9_KI270719v1_random 66957 108 + 176845 TTGAGATTATTTTC-TCAG---AAAAATTAACATGACCAGGTT--GTCATCCTATGCAAAC---ATTAGTATGCCTTATTGATTTTTCACTAAGTTATATAGCTTATAT--TATAAGAC s panTro5.chr4 135091743 108 + 194502333 TTGAGATTATTTTC-TCAG---AAAAATTAATATGACCAGGTT--GTCATCCTATGCAAAC---ATTAGTATGCCTTATTGATTTTTCACTAAGTTATATATCTTATCT--TATAAGAC i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486508 108 - 115148730 TTGAGATTATTTTC-TCAG---AAAAATTAATATGACCAGGTT--GTCATCCTATGCAAAC---ATTAGTATGCCTTATTGATTTTTCACTAAGTTATATTGCTTATAT--TGTAAGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131428144 103 + 190429646 TTGAGATTATTTTC-TCAG---AAAAATTAATATGACCAGATT--GTCATCCTATGCAAAC---ATTAGTATGCCTTACTGATTTTTCACTAAGTTATATAGCTTA-------TAAGAC i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130947150 103 + 189454096 TTGAGATTATTTTC-TCAG---AAAAATTAATATAACCAGATT--GTCATCCTATGCAAAC---ATTAGTATGCCTTACTGATTTTTCACTAAGTTATATAGCTTA-------TAAGAC i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34938916 103 - 40319822 TTGAGATTATTTTC-TCAG---AAAAATTAATATAACCAGATT--GTCATCCTATGCAAAC---ATTAGTATGCCTTACTGATTTTTCACTAAGTTATATAGCTTA-------TAAGAC i macNem1.NW_012010911v1 C 0 I 1 s cerAty1.NW_012000798v1 4492871 103 - 9219162 TTGAGATTATTTTC-TCAG---AAAAATTAATATGACCAGATT--GTCATCCTATGCAAAC---ATTAGTATGTCTTACTGATTTTTCACTAAGTTATATAGCTTA-------TAAGAC i cerAty1.NW_012000798v1 C 0 I 1 s chlSab2.chr7 79017706 103 + 135778131 TTGAGATTATTTTC-TCAG---AAAAATTAATATGGCCAGATT--GTCATCCTATGCAAAC---ATTAGTATGCCTTACTGATTTTTCACTAAGTTATATAGCTTA-------TAAGAC i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012103277v1 2790182 103 - 3013352 TTGAGTTTATTTTC-TCAG---AAAAATTAATATGACCAGATT--GTCATCCTATGCAAAC---ATTAGTATGCCTTACTGATTTTTCACTAAGTTATATAGCTTA-------TAAGAC i manLeu1.NW_012103277v1 C 0 I 1 s colAng1.NW_012114544v1 6016359 103 + 8656713 TTGAGATTATTTTC-TCAG---AAAAATTAATATGACCAGATT--GTCATCCTATGCAAAC---ATTAGTATGCCTTACTGATTTTTCGCTAAGTTATATAGCTTA-------TAACAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462006 111 - 190850796 TTGAGATTATTTTC-TCAG---AAAAATTAATATGACCAGGTT--GTCGTCCTATGCAAACATTATTAGCATGGCCTATTGATTTTTCACTAAGTTGTATAGCTTATAC--TATAAGAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533633 108 - 25294431 TTGAGATTATTTTC-TCAG---AAAAATTAATATGACCAGGTT--GTCATTCTATGCAAAC---ATTAGCACGGCCTATTGATTTTTCACTAAGTTATATAACTTATAC--TATAAGAC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4088344 108 - 6311556 TTGAGATTATTTTC-TCAG---AAAAATTAATATGACCAAGTT--GTCATCCCATGCAAAC---ATTAGCATGGCCTATTGATTTTTCACTAAGTTATATAGTTTATAC--TATAAGAC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14944913 108 + 15034901 TTGAGATTATTTTC-TCAG---AAAAATTAGTAGGACCAGGTT--GTCATCCTATGCAAAC---ATTAGCATGGTCTATTGATTTTTCACTAAGTTATATAGCTTATAC--TATAAGAC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66974853 112 + 93316391 TTGAGATTATTTTT-CCAGAA-AAACATTAACATAGCTAGGTTGCATCATCCTACACAAAC---ATTAGTATGCCTTATTGATTTTTCACTAAGTTACATAGTTTTCAC--TATAAGCC i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 2235292 112 + 3201129 TTGAGATTATTTTT-TCAGAACAAAAATTTACGTCGCCAGCTTATGTCATCCTATGCACAC---A-TAGTATGACTTACTGATTTTCAACTAAATTACTTAATTTTCAC--TATGAGAC i otoGar3.GL873702 I 102 C 0 s canFam3.chr19 44067928 109 - 53741614 TTGAGAATATTTGC-TTCGT--AAAAATTAATATGGCCAGGTTGTGTCATCCTATGAAAAT---ATTGGTATGCTGTATTGATTTTTCACC--GTTGCATAGTTTATAC--TATAAGAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786585 86 + 5974691 TTGAAACTATTTGCACCCT---AAGAATTCATATGGCCAGGTT---TTATCATTTGATAAA---ATTGG------------------------GTTACATAGTTTAAACCGTTTAAGGT i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016806351v1 1237541 674 - 1973658 I a score=15561.000000 s hg38.chr9_KI270719v1_random 67065 1 + 176845 T s panTro5.chr4 135091851 1 + 194502333 T i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486616 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131428248 1 + 190429646 T i rheMac8.chr5 I 1 C 0 s macFas5.chr5 130947254 1 + 189454096 T i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34939020 1 - 40319822 T i macNem1.NW_012010911v1 I 1 C 0 s cerAty1.NW_012000798v1 4492975 1 - 9219162 T i cerAty1.NW_012000798v1 I 1 C 0 s chlSab2.chr7 79017810 1 + 135778131 T i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012103277v1 2790286 1 - 3013352 T i manLeu1.NW_012103277v1 I 1 C 0 s colAng1.NW_012114544v1 6016462 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s rhiBie1.NW_016806351v1 1238215 1 - 1973658 T i rhiBie1.NW_016806351v1 I 674 I 71 s calJac3.chr3 129462117 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533741 1 - 25294431 T i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4088452 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945021 1 + 15034901 T i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66974965 1 + 93316391 T i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 2235404 1 + 3201129 T i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44068037 1 - 53741614 T i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786671 1 + 5974691 T i dasNov3.JH569232 C 0 C 0 a score=61124.000000 s hg38.chr9_KI270719v1_random 67066 6 + 176845 -TTTTTA- s panTro5.chr4 135091852 6 + 194502333 -TTTTTA- i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486617 6 - 115148730 -TTTCTA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131428249 6 + 190429646 -TTTTTA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947255 6 + 189454096 -TTTTTA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939021 6 - 40319822 -TTTTTA- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492976 6 - 9219162 -TTTTTA- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017811 6 + 135778131 -TTTTTA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2790287 6 - 3013352 -TTTTTA- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6016463 6 + 8656713 -TTTTTA- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462118 6 - 190850796 -TTTTTA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533742 6 - 25294431 -TTTTTA- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4088453 6 - 6311556 -TTTTTA- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945022 6 + 15034901 -TTTTCA- i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66974966 6 + 93316391 -TTTTTA- i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 2235405 6 + 3201129 -TTTTTA- i otoGar3.GL873702 C 0 I 737 s canFam3.chr19 44068038 6 - 53741614 -TTTTCC- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786672 8 + 5974691 TTCTTTCC i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016806351v1 1238216 71 - 1973658 I a score=12581.000000 s hg38.chr9_KI270719v1_random 67072 2 + 176845 TG s panTro5.chr4 135091858 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486623 2 - 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131428255 2 + 190429646 GG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947261 2 + 189454096 GG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939027 2 - 40319822 GG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492982 2 - 9219162 GG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017817 2 + 135778131 GG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2790293 2 - 3013352 GG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6016469 2 + 8656713 TG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462124 2 - 190850796 TG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533748 2 - 25294431 TG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4088459 2 - 6311556 TG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945028 2 + 15034901 TG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66974972 2 + 93316391 TG i micMur3.chr14 C 0 C 0 s canFam3.chr19 44068044 2 - 53741614 TG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786680 2 + 5974691 TG i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016806351v1 1238216 71 - 1973658 I e otoGar3.GL873702 2235411 737 + 3201129 I a score=401131.000000 s hg38.chr9_KI270719v1_random 67074 35 + 176845 GGTGTCTCTACCTATAGATT-CCAGGCACTAACAAA s panTro5.chr4 135091860 35 + 194502333 GGTGTCTCTACCTATAGATT-CCAGGCACTAACAAA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486625 35 - 115148730 GGTGTCTCTACCTATAGATT-CCAGGCACTAACAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131428257 35 + 190429646 GGTGTTTCTACCTATAGATT-CCAGGCACTAACAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947263 35 + 189454096 GGTGTTTCTACCTATAGATT-CCAGGCACTAACAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939029 35 - 40319822 GGTGTTTCTACCTATAGATT-CCAGGCACTAACAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4492984 35 - 9219162 GGTATTTCTACCTATAGATT-CCAGGCACTGACAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017819 35 + 135778131 GGTGTTTCTACCTATAGATT-CCAGGCACTAACAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2790295 35 - 3013352 GGTGTTTCTACCGATAGATT-CCAGGCACTAACAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6016471 35 + 8656713 GGTGTTTCTACCTATAGATT-CCAGGCACTAACAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462126 35 - 190850796 GGTGTGTCTACCTATAGATT-CCAGGCACTAACAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533750 35 - 25294431 GGTGTCTCTACCTATAGATT-CCAGGCACTAACAAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4088461 35 - 6311556 GGTGTCTCTACCTATAGATT-CCAGGCACTAACAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945030 35 + 15034901 GGTGTCTCTACCTATAGATT-CCAGGCACTAACAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 66974974 36 + 93316391 GATGTGTATACATATAGATTCCCAGACACTAACAAA i micMur3.chr14 C 0 I 320 s otoGar3.GL873702 2236148 35 + 3201129 GATGTCTCTGTGTATTGATT-TCAGACACAAACAAA i otoGar3.GL873702 I 737 C 0 s canFam3.chr19 44068046 35 - 53741614 GATATCTCCATACATAGATT-CCAGGCACTAACAAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786682 33 + 5974691 GATGATTCTGTGTATAGATT-CAAA--ATTAACAAA i dasNov3.JH569232 C 0 C 0 e rhiBie1.NW_016806351v1 1238216 71 - 1973658 I a score=258256.000000 s hg38.chr9_KI270719v1_random 67109 27 + 176845 CATGTAGAAACTCATAAATTTAATGCA s panTro5.chr4 135091895 27 + 194502333 CCTGTAGAAATTCATAAATTTAATGCA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486660 27 - 115148730 TCTGTAGAAATTCATAAATTTAATGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131428292 27 + 190429646 TCTGTAGAAATTAATAAATTTAATGCA i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130947298 27 + 189454096 TCTGTAGAAATTAATAAATTTAATGCA i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34939064 27 - 40319822 TCTGTAGAAATTAATAAATTTAATGCA i macNem1.NW_012010911v1 C 0 I 1 s cerAty1.NW_012000798v1 4493019 27 - 9219162 TCTGTAGAAATTCATAAATTTAATGCA i cerAty1.NW_012000798v1 C 0 I 1 s chlSab2.chr7 79017854 27 + 135778131 TCTGTAGAAATTCATAAATTTAATGCA i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012103277v1 2790330 27 - 3013352 TCTGTAGAAATTCATAAATTTAATGCA i manLeu1.NW_012103277v1 C 0 I 1 s colAng1.NW_012114544v1 6016506 27 + 8656713 TCTGTAGAAATTCATAAATTTAATGCA i colAng1.NW_012114544v1 C 0 I 1 s calJac3.chr3 129462161 27 - 190850796 TCAGTAGAAATTCATAAGCTTAATGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533785 27 - 25294431 TCAGTAGAAATTCACAAGCTTAATGCA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4088496 27 - 6311556 TCAGTAGAAATTCATAAGCTTAATGCA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945065 27 + 15034901 TCAGTAGAAATTCATAAGCTTAATGCA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2236183 27 + 3201129 TCTATAAGAATACAGCAACTTAATGGA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44068081 27 - 53741614 TCTTTAGACACTCATGAGCTTAATGCA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786715 27 + 5974691 TCTGCAGAAATTCAGAAACTTAATACA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975010 320 + 93316391 I e rhiBie1.NW_016806351v1 1238216 71 - 1973658 I a score=13923.000000 s hg38.chr9_KI270719v1_random 67136 1 + 176845 T s panTro5.chr4 135091922 1 + 194502333 T i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486687 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131428320 1 + 190429646 T i rheMac8.chr5 I 1 C 0 s macFas5.chr5 130947326 1 + 189454096 T i macFas5.chr5 I 1 C 0 s macNem1.NW_012010911v1 34939092 1 - 40319822 T i macNem1.NW_012010911v1 I 1 C 0 s cerAty1.NW_012000798v1 4493047 1 - 9219162 T i cerAty1.NW_012000798v1 I 1 C 0 s chlSab2.chr7 79017882 1 + 135778131 T i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012103277v1 2790358 1 - 3013352 T i manLeu1.NW_012103277v1 I 1 C 0 s colAng1.NW_012114544v1 6016534 1 + 8656713 T i colAng1.NW_012114544v1 I 1 C 0 s rhiBie1.NW_016806351v1 1238287 1 - 1973658 T i rhiBie1.NW_016806351v1 I 71 N 0 s calJac3.chr3 129462188 1 - 190850796 T i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6533812 1 - 25294431 T i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4088523 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14945092 1 + 15034901 T i aotNan1.NW_018507635v1 C 0 I 1 s otoGar3.GL873702 2236210 1 + 3201129 T i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44068108 1 - 53741614 T i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1786742 1 + 5974691 T i dasNov3.JH569232 C 0 I 1 e micMur3.chr14 66975010 320 + 93316391 I a score=161326.000000 s hg38.chr9_KI270719v1_random 67137 17 + 176845 TTTATC-AAGTTGATTAA s panTro5.chr4 135091923 17 + 194502333 TTTATC-AAGTTGATTAA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 90486688 17 - 115148730 TTTATC-AAGTTGACTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131428321 17 + 190429646 TTTATC-AAGTTGACTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947327 17 + 189454096 TTTATC-AAGTTGACTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939093 17 - 40319822 TTTATC-AAGTTGACTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4493048 17 - 9219162 TTTATC-AAGTTGACTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017883 17 + 135778131 TTTATC-AAGTTGACTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2790359 17 - 3013352 TTTATC-AAGTTGACTAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6016535 17 + 8656713 TTTATC-AAGTTGACTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462190 17 - 190850796 TATATC-AAGTTGACTAA i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6533814 16 - 25294431 TTTAT--AAGTTGACTTA i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4088525 17 - 6311556 TTTATC-AAGTTGACTAA i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14945094 17 + 15034901 TTTATC-AAGTTGACTAA i aotNan1.NW_018507635v1 I 1 C 0 s otoGar3.GL873702 2236212 17 + 3201129 TTCAAC-AATTTCCTTAA i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44068110 17 - 53741614 TTCATC-AAGTTGTCTAA i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1786744 18 + 5974691 TTCATCAAAATTGTCTAA i dasNov3.JH569232 I 1 C 0 e micMur3.chr14 66975010 320 + 93316391 I a score=130343.000000 s hg38.chr9_KI270719v1_random 67154 14 + 176845 TATAGCATGAACAT s panTro5.chr4 135091940 14 + 194502333 TATAGCATGAACAT i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428338 14 + 190429646 TATAGCATGAACAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947344 14 + 189454096 TATAGCATGAACAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939110 14 - 40319822 TATAGCATGAACAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4493065 14 - 9219162 TATAGCATGAACAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017900 14 + 135778131 TATACCATGAACAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2790376 14 - 3013352 TATAGCATGAACAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6016552 14 + 8656713 TATAGCATGAACAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462207 14 - 190850796 TATAGCATGAACAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533830 14 - 25294431 TACAGCATGAACAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4088542 14 - 6311556 TACAACATGAACAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945111 14 + 15034901 TACAGCATGAACAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 2236229 14 + 3201129 TATAGTATAAACAT i otoGar3.GL873702 C 0 n 0 s canFam3.chr19 44068127 14 - 53741614 TATAGCATAAACAT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1786762 14 + 5974691 TATAGTACAAACTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975010 320 + 93316391 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=1642465.000000 s hg38.chr9_KI270719v1_random 67168 236 + 176845 TTTTCAACTGGCTTCACAAATCATTTATTTTTAAATGTCATTCTTATACCTGTATTAGAGAG---AAAAAAGCCAGAGGTGGCAAGGTGATATACAGATCAACTGGAAATCCACAAGTTTTGGTTTGGAA---CTCTTTGGAAAATTGAATAAAG-AGTCACACCTTGCTCAAAACTGAATCAGTAAAAGTGATGTACATATCAATAAACAAACTTCTCTAAT-AAAAAAG-----------CATTAAAAATATA s panTro5.chr4 135091954 237 + 194502333 TTTTCAATTGGCTTCACAAATCATTTATTGTTAAATGTTATTCTTATACCTGTATTAGAGAG---AAAAAAGCCAGAGGTGGCAAGGTGATATACAGATCAACTGGAAATCCACAAGTTTTGGTTTGGAA---CTCTTTGGAAAATTGAATAAAG-AGTCACACCTTGCTCAAAACTGAATTAGTAAAAGCGATGTACATATCAATAAACAAACTTCTCTAATAAAAAAAG-----------CATCAAAAATATA i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428352 238 + 190429646 TTTTCAATTGGCTTCACAAATCATTTATTGTTAAATGTTATTCTTATAGCTGTATTAGAGAG---AAAAAAGCTAGAGGTGGCAAGGTGATAAACGGATCAACTGGAAATCCACAAGTTTTGGTTTGAAA---CTCTTCAGAAAATTGAATGAAG-AGTCACATCCTTCTCAAAACTGAATTAGTAAAAGTAATGTACATATCAATAAACAAACCTCTCTAAT-AAAAAAACC---------CATTAAAAATAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947358 237 + 189454096 TTTTCAATTGGCTTCACAAATCATTTATTGTTAAATGTTATTCTTATAGCTGTATTAGAGAG---AAAAAAGCTAGAGGTGGCAAGGTGATAAACGGATCAACTGGAAATCCACAAGTTTTGGTTTGAAA---CTCTTCAGAAAATTGAATGAAG-AGTCACATCCTTCTCAAAACTGAATTAGTAAAAGTAATGTGCATATCAATAAACAAACCTCTCTAATAAAAAAAA-----------CATTAAAAATAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939124 236 - 40319822 TTTTCAATTGGCTTCACAAATCATTTATTGTTAAATGTTATTCTTATAGCTGTATTAGAGAG---AAAAAAGCTAGAGGTGGCAAGGTGATAAACGGATCAACTGGAAATCCACAAGTTTTGGTTTGAAA---CTCTTCAGAAAATTGAATGAAG-AGTCACATCCTTCTCAAAACTGAATTAGTAAAAGTAATGTACATATCAATAAACAAACCTCTCTAAT-AAAAAAA-----------CATTAAAAATAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4493079 238 - 9219162 TTTTCAATTGGCTTCACAAGTCATTTATTGTTAAATGTTATTCTTATAGCTGTATTAGAGAG---AAAAAAGCTAGAGGTGGCAAGGTGATAAACGGATCAACTGGAAATCCACAAGTTTTGGTTTGAAA---CTCTTCAGAAAATTGAATGAAG-AGTCACATCCTTCTCAAAACTGAATTAGTAAAAGTAATGTACATATTAATAAACAAACCTCTCTAAT-AAAAAAAAA---------CATTAAAAATACA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79017914 240 + 135778131 TTTTCAATTGGCTTCACAAATCATTTATTGTTAAATGTTATTCCTATAGCTGTATTAGAGAG---AAAGAAGCTAGAGGTGGCAAGGTGATAAACGGATCAACTGGAAATCCACACGTTTTGGTTTGAAA---CTCTTCAGAAAATTGAATGAAG-AGTCACACCCTTCTCAAAACTGAATTAGTAAAAGTAATGTACATATCAATAAACAAACCTCTCTAAT-AAAAAAAAAAT-------CATTAAAAATACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2790390 237 - 3013352 TTTTCAATTGGCTTCACAAATCATTTATTGTTAAATGTTATTCTTATAGCTGTATTAGAGAG---AAAAAAGCTAGAGGTGGCAAGGTGATAAACGGATCAACTGGAAATCCACAAGTTTTGGTTTGAAA---CTCTTCAGAAAATTGAATGAAG-AGTCACATTCTTCTCAAAACTGAATTAGTAAAAGTAATGTACATATCAATAAACAAACCTCTCTAAT-AAAAAAAA----------TATTAAAAATATA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6016566 236 + 8656713 TTTTCAATTGACTTCACAAATCATTTATTGTTAAATGTTATTCCTATAGCTGTATTAGAGAG---AAAAAAGCTAGAGGTGGCAAGGTGATAAACGGATCAACTGGAAATCCACAAGTTTTGGTTTGGAA---CTCTTCAGAAAATTGAATGAAG-AGTCACACCCTTCTTAAAACTGAATTGGTAAAAGTAATGTACATATCAATAAACAAACCTCTCTAAT-AAAGAAA-----------CACTAAAAATACA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462221 240 - 190850796 TTTTCAATTGATTTCACAAATCATTCACTGTTAAATGTTATTCTTATAGCTGTATTAGAGAG---ACAAAAAATAGAGGTTGCAAGGTGATATACAGATCAACTGGAAATCCACAAGTTTTGGTTTGAAA---GTTTCTGGAAAATTTAACAAAG-AGTCACACCCTGCTCAAAATTGAAT---TAAAAGTGATGTACATATC----AACAAACTTCTCTAAT-TTAAAAAAAAGCAATTTGCATTAAAAATATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6533844 238 - 25294431 TTTTCAATTGGCTTCACAAATCATTTACTGTTAAATGTTATTCTTATAGCCGTATTAGAGAG---AAAAAAGATAGAGGTTGCAAGGTGATATACAGATCAACTGGAAATCTACAAGTTTTGGTTTGAAA---GTTTTTGGAAAATTGAACAAAA-AGTCACACCCTGCTCAAAATTGAATTAGTAAAAGTGATGTACATATC----AACAAACTTCTCTAAT-TAAAGAACAATCAATTTGCATTAAAA----- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4088556 240 - 6311556 TTTTCAATTGGCTTCACAAATCATTTACTGTTAAATGTTATTCTTATAGCTGTATTAGAGAG---AAAAAAGATAGAGGTTGCAAGGTGATATACAGATCAACTGGAAATCCACAAGTTTTGGTTTGAAA---GCTTTTGGAAAATTGAACAAAG-AGTCACACCCTGCTCAAAATTAAATTAGTAAAAGTGATGTACATATC----AACAAACTTCTCTAAT-TAAAGAAAAATCAATTTGCATTAAAAAT--- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945125 240 + 15034901 TTTTCAATTGGCTTCACAAATCATTTACTGTTAAATGTTATTCTTATAGCTGTATTAGAGAG---AAAAAAG--AGAGGTTGCAAGCTGATATACAGATCAACTGGAAATCCACAAGTTTTGGTTTGAAA---GTTTTTGGAAAATTGAACAAAG-AGCCACACCTTGCTCAAAATTGAATTAGTAAAAGTGATGTACATATC----AGCAAACTTCTCTAAT-TTTA-AAAAAGCAATTTGCATTACAAATATG i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44068141 249 - 53741614 TTTTCAATTGACTTCACAAATCATTTGTTGTTAAACATTATTTTGGTAGCTGCATTAGAGGGGAAAAAAAAGCTAGATTTAACAAGGTGACATATA---CCAATGGAAATC-ACAAGTTTGCGTTTGGAA-ACCTTTTCTGAAAATTAAGTAAAATAGAATCATTCTGCTCAAAGCTAAATTAATAAAAGTGATATACCTAGTAGCCAACAAATCTAATTAAT-AAAAAAGGAAGTGACTGGTGCTAGAAAAACA i canFam3.chr19 C 0 I 3 s dasNov3.JH569232 1786776 242 + 5974691 TATTCAATCTATTTCACAGATCATTTATAGTTAAATAATATCTTTATAGCTGCATTAGAGCA---AAAAAATCTCTA--TGACAACGTGAAATATATA-CAACTATAAATCCATAGAGTTTGGTTTGGGAAATGTTTTCCAAAAATTGAGC-----AGTCACGTTCTGCT-AAAACCGTATTAATAAAAGTGATACACATAGCAGCCAACAAATTTGTCAACA-ACAAAAGGAAACaaataatattaaaaatata i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975010 320 + 93316391 I e otoGar3.GL873702 2236243 0 + 3201129 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=979036.000000 s hg38.chr9_KI270719v1_random 67404 126 + 176845 --GTCAGCATATA---------TTTTT-TGGAATATAAAATTGAGGAACTAGAATAATTCAACTTGAATAAGTGTAACTAATTCA-TTTTCTGCAAAATATTACCCAGAGATTGAGTATTTTTCTATTTATTCTATTGG s panTro5.chr4 135092191 127 + 194502333 --GTCAGCATATA---------TTTTTATGGAATATAAAATTGAGGAACTAGAATAATTCAACTTGAATAAGTGTAACTAATTCA-TTTTCTGCAAAATATTACCCAGAGTTTGAGTATTTTTCTATTTATTCTATTGG i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428590 124 + 190429646 --GTCAACATATA---------TTTTTCTGGAATATAAAATTGGGGAACTAGAATAATTCAACTTGAATAAGTGTAATTAATTCA-TTTTATGCAAAATATTACCCAGAGTTTGAGTATTTTTCTATTTATTCTa---a i rheMac8.chr5 C 0 I 13 s macFas5.chr5 130947595 127 + 189454096 --GTCAACATATA---------TTTTTCTGGAATATAAAATTGGGGAACTAGAATAATTCAACTTGAATAAGTGTAATTAATTCA-TTTTATGCAAAATATTACCCAGAGTTTGAGTATTTTTCTATTTATTCTATTGG i macFas5.chr5 C 0 I 13 s macNem1.NW_012010911v1 34939360 126 - 40319822 --GTCAACATATA---------TTTTTCTGGAATATAAAATTGGGGAACTAGAATAATTCAACTTGAATAAGTGTAATTAATTCA-TTTTA-ATAAAATATTACCCAGAGTTTGAGTATTTTTCTATTTATTCTATTGG i macNem1.NW_012010911v1 C 0 I 12 s cerAty1.NW_012000798v1 4493317 127 - 9219162 --GTCAACATATA---------TTTTTCTGGAATATAAAATTGGGGAACTAGAATAATTCAACTTGAATAAGTGTAATTAATTCA-TTTTATGCAAAATATTACCCAGAGTTTGAGTATTTTTCTATTTATTCTATTGG i cerAty1.NW_012000798v1 C 0 I 13 s chlSab2.chr7 79018154 128 + 135778131 --GTCAACATATA---------TTTTTCTGGAATATAAAATTGGGGAACTAGACTAATTCAACTTGAATAAGTGTAATTCATTCATTTTTATGCAAAATATTACCCAGAGTTTGAGTATTTTTCTATGTATTCTATTGG i chlSab2.chr7 C 0 I 2 s manLeu1.NW_012103277v1 2790627 127 - 3013352 --GTCAACATATA---------TTTTTCTGGAATATAAAATTGGGGAACTAGAATAATTCAACTTGAATAAGTGTAATTAATTCA-TTTTATGCAAAATATTACCCAGAGTTTGAGTATTTTTCTATTTATTCTATTGG i manLeu1.NW_012103277v1 C 0 I 13 s colAng1.NW_012114544v1 6016802 125 + 8656713 --GTCAACATATA----------TTTTCTGGAATATAAAATTGGGGAACTAGAATAATTCAACTTGAATAAGTGTAACTAATTCA-TTTTATGTAAAATATTACCCAGAGTTTGAGTATTTTTCTATTTATTCTATTG- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462461 126 - 190850796 --ATCAGAATAT----------TTTTTCCGGAATATAAAACTGAGAAACTAAAATAACTCAACTTGAGTAAGTATAACTAATTCA-TTTTCTGCAAAATATTACCCAGAGTTTGAGTATTTTTCTATTTATTCTATAGG i calJac3.chr3 C 0 I 1 s saiBol1.JH378129 6534082 126 - 25294431 --ATCAGAATAT----------TTTTCCTGGAATATAAAATTGAGGAACTAGAATAATTCAACTTGAGTAAGCACAACTAATTCA-TTTTCTGCAAAATGTTACCCAGAGTTTGAATATTTTTCTATTTATTCTATTGG i saiBol1.JH378129 C 0 I 1 s cebCap1.NW_016107420v1 4088796 126 - 6311556 --ACCAGAATAT----------TTTTTCTGGAATATAAAATTGAGGAACTAGAATAATTCAACTTGAGTAAGCATAATTAAGTCA-TTTTCTGCAAAATATTGCCCAGAGCTTGAGTATTTTTCTATTTATTCTATTGG i cebCap1.NW_016107420v1 C 0 I 1 s aotNan1.NW_018507635v1 14945365 126 + 15034901 --ATCAGAATAT----------TTTTTCTGGAATATAAAACTGAGGAACTAAAATAACTCAACTTGAGTAAGTATAACTAATTCA-TTTTCTGCAAAATATTACCCAGAGTTCTAGTATTTTTCTATTTATTCTATAGG i aotNan1.NW_018507635v1 C 0 I 1 s micMur3.chr14 66975330 122 + 93316391 --GTCAGAATAT----------TTTTTCTGGAATATAAAAGTGAGTAATTAGAATAATTCAACT----TAAGTATTACTAATTTG-TTTTCTCCAAAATGTTAAGTGGAGTTTGACTCTTTTTCTATTTATTCTATTGG i micMur3.chr14 I 320 C 0 s canFam3.chr19 44068393 127 - 53741614 --TTGCTCAGATT---------TTTTTCTAGAATATAAAATACAGAAACTAGAATAATTCAAGTTATGTAAACATTAGTAATATA-TATCCTTTAAAATATTTTCTTGAATTTGGATATTTTCCTATTTATTATATAGG i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1787018 134 + 5974691 aaatCTGAACAGAAATGTTTACTTTTTCT--AATATAAAATTCAGGATCTAGTATAATTCAACTTGT-TGAGTACTATTAATCGA-CTTCGTCC-AAATATTACTCTTGGTTTGTTTCATTTTCTATTTATTCCATAGG i dasNov3.JH569232 C 0 C 0 e otoGar3.GL873702 2236243 0 + 3201129 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=14989.000000 s hg38.chr9_KI270719v1_random 67530 2 + 176845 AA s panTro5.chr4 135092318 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428727 2 + 190429646 aa i rheMac8.chr5 I 13 C 0 s macFas5.chr5 130947735 2 + 189454096 aa i macFas5.chr5 I 13 C 0 s macNem1.NW_012010911v1 34939498 2 - 40319822 AA i macNem1.NW_012010911v1 I 12 C 0 s chlSab2.chr7 79018284 2 + 135778131 AA i chlSab2.chr7 I 2 C 0 s colAng1.NW_012114544v1 6016927 2 + 8656713 AA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462588 2 - 190850796 AA i calJac3.chr3 I 1 C 0 s saiBol1.JH378129 6534209 2 - 25294431 AA i saiBol1.JH378129 I 1 C 0 s cebCap1.NW_016107420v1 4088923 2 - 6311556 AA i cebCap1.NW_016107420v1 I 1 C 0 s aotNan1.NW_018507635v1 14945492 2 + 15034901 AA i aotNan1.NW_018507635v1 I 1 C 0 s micMur3.chr14 66975452 2 + 93316391 AA i micMur3.chr14 C 0 n 0 s canFam3.chr19 44068520 1 - 53741614 -A i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1787152 2 + 5974691 AA i dasNov3.JH569232 C 0 C 0 e otoGar3.GL873702 2236243 0 + 3201129 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=242952.000000 s hg38.chr9_KI270719v1_random 67532 58 + 176845 AAAAATGATATACCACTGTACTGGAAATATTCAGAAAAGTTTGTCTATTTTTTAA------------------------------------------------------------------AAT s panTro5.chr4 135092320 58 + 194502333 AAAAATGATATACCACTGTACTGGAAATATTCAGAAAAGTTAGTCTATTTTTTAA------------------------------------------------------------------AAT i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428729 58 + 190429646 gaaaaagaaaTACCACTGTGCTGCGAATATACAGAAAAGTTAATCTAATTTTTAA------------------------------------------------------------------AGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947737 58 + 189454096 aaaaaTGAAATACCACTGTGCTGCGAATATACAGAAAAGTTAATCTAATTTTTAA------------------------------------------------------------------AGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939500 58 - 40319822 AAAAATGAAATACCACTGTGCTGCGAATATACAGAAAAGTTAATCTAATTTTTAA------------------------------------------------------------------AGT i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018286 58 + 135778131 AAAAATGAAATACCACTGTACTGGGAATATACAGAAAAGTTAATCTAATTTTTAA------------------------------------------------------------------AGT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6016929 58 + 8656713 AAAAATGAAATACCACTGTACTGGGAATATACAGAAAAATTAATCTAATTTTTAA------------------------------------------------------------------AGT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462590 58 - 190850796 TAAAATGAAATAACACTGTACTAGGATTATTCAGAGAAGTTAATCCATTTTTTAA------------------------------------------------------------------Aat i calJac3.chr3 C 0 I 27 s saiBol1.JH378129 6534211 124 - 25294431 TAAAATGAAATAACACTATActggaattattcagagaagttaatctattttttaaataactatctgtcttcaaagtggcagaggtatgctgatgttgcctccaatctgccatcttgggaagaaa i saiBol1.JH378129 C 0 I 30 s cebCap1.NW_016107420v1 4088925 55 - 6311556 TAAAATGAAATAAGACTATACTGGAATTATTCAGAGAAGTTAA---ACTTTTTAA------------------------------------------------------------------Aat i cebCap1.NW_016107420v1 C 0 I 31 s aotNan1.NW_018507635v1 14945494 58 + 15034901 TAAAATGAAATAACACTGTACCGGGATTATTCAGAGAAGTTAATCTATTTTTTTA------------------------------------------------------------------AAA i aotNan1.NW_018507635v1 C 0 I 3 s canFam3.chr19 44068521 58 - 53741614 AAAAGTGAAATATCACTGTTCTGGGAATATTTAGGGAAATAGGACTGGTTTAAAA------------------------------------------------------------------ATA i canFam3.chr19 C 0 I 2 s dasNov3.JH569232 1787154 57 + 5974691 -AAAATGAAATATTACTATACTGGAAATAATTAGAGAACTTAAGCTACTTTTTAA------------------------------------------------------------------AAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e otoGar3.GL873702 2236243 0 + 3201129 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=27378.000000 s hg38.chr9_KI270719v1_random 67590 8 + 176845 TGTACTTA s panTro5.chr4 135092378 8 + 194502333 TGTACTTA i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428787 8 + 190429646 TGTATTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947795 8 + 189454096 TGTATTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939558 8 - 40319822 TGTATTTA i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018344 8 + 135778131 TCTATTTA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6016987 8 + 8656713 TGTATTTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462675 8 - 190850796 tatatata i calJac3.chr3 I 27 I 6 s saiBol1.JH378129 6534365 8 - 25294431 tatattta i saiBol1.JH378129 I 30 I 8 s aotNan1.NW_018507635v1 14945555 8 + 15034901 TATACATA i aotNan1.NW_018507635v1 I 3 I 12 s canFam3.chr19 44068581 8 - 53741614 TGTATCCA i canFam3.chr19 I 2 C 0 s dasNov3.JH569232 1787211 8 + 5974691 AATAACTA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e otoGar3.GL873702 2236243 0 + 3201129 I e cebCap1.NW_016107420v1 4088980 31 - 6311556 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=10010.000000 s hg38.chr9_KI270719v1_random 67598 2 + 176845 TT s panTro5.chr4 135092386 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428795 2 + 190429646 TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947803 2 + 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939566 2 - 40319822 TT i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018352 2 + 135778131 TT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6016995 2 + 8656713 TT i colAng1.NW_012114544v1 C 0 C 0 s saiBol1.JH378129 6534381 2 - 25294431 TT i saiBol1.JH378129 I 8 C 0 s cebCap1.NW_016107420v1 4089011 2 - 6311556 tt i cebCap1.NW_016107420v1 I 31 C 0 s aotNan1.NW_018507635v1 14945575 2 + 15034901 TT i aotNan1.NW_018507635v1 I 12 C 0 s canFam3.chr19 44068589 2 - 53741614 TT i canFam3.chr19 C 0 I 1406 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1787219 0 + 5974691 C e otoGar3.GL873702 2236243 0 + 3201129 I e calJac3.chr3 129462683 6 - 190850796 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=41775.000000 s hg38.chr9_KI270719v1_random 67600 10 + 176845 ATACCTTTAT s panTro5.chr4 135092388 10 + 194502333 ATACCTTTAT i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428797 10 + 190429646 ATACCTTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947805 10 + 189454096 ATACCTTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939568 10 - 40319822 ATACCTTTAT i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018354 10 + 135778131 ATATCTTTAT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6016997 10 + 8656713 ATACCTTTAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462689 6 - 190850796 ----CTTTGC i calJac3.chr3 I 6 C 0 s saiBol1.JH378129 6534383 10 - 25294431 ATATCTTTAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089013 10 - 6311556 atatctttat i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945577 10 + 15034901 ATAGCTTTAT i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1787219 7 + 5974691 ---CCCTTGT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 2236243 0 + 3201129 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=735453.000000 s hg38.chr9_KI270719v1_random 67610 137 + 176845 AACCGTGAGATAATATATTTATTATTTGAATGAGAA-TA--------AATGTTTATGATTTATACAAAAATGCCTGACACAGACTACTATGCCCACAAAAGTTGAATGGTTGTTTTTAGCTTATATAT--ACCTATACAGGTTAATAG s panTro5.chr4 135092398 138 + 194502333 AACCGTGAGATAATATATTTATTATTTGAATGAGAATTA--------AATGTTTATGATTTATACAAAAATGCCTGACACAGACTACTTTGCCCACAAAAGTTGAATGGTTATTTTTAGCTTATATAT--ACCTATACAGGTTAATAG i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428807 138 + 190429646 AACCATGAGATAATATATTTGCTATTTTAATGAGAATTA--------AATGTTTATGATTTATATGAAAATGGCTGACACAGCCTACTATGCCCATAAAAGTTGAATGGTTATTTTTAGCTTATATAT--AACTACACAGGTTAATAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947815 138 + 189454096 AACCATGAGATAATATATTTGCTATTTTAATGAGAATTA--------AATGTTTATGATTTATACGAAAATGGCTGACACAGCCTACTATGCCCATAAAAGTTGAATGGTTATTTTTAGCTTATATAT--AACTACACAGGTTAATAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939578 138 - 40319822 AACCATGAGATAATATATTTGCTATTTTAATGAGAATTA--------AATGTTTATGATTTATACGAAAATGGCTGACACAGCCTACTATGCCCATAAAAGTTGAATGGTTATTTTTAGCTTATATAT--AACTACACAGGTTAATAG i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018364 138 + 135778131 AACCATGAGATAATATATTTGCTATTTGAATGAGAATTA--------AATGTTTATGATTTATACGAAAATGGCTGACACAGCCTAGTATGCCCATAAAAGTTGAATGGTTATTTTTAGCTTATATAT--AACTACACAGGTTAATAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6017007 138 + 8656713 AGCCATGAGATAATATATTTGCTGTTTGAATGAGAATTA--------AATGTTTATGATTTATATAAAAATGGTTGACACAGACTACTATGCCCATAAAAGTTGAATGGTTATTTTTAGCTTATATAT--AACTACACAGGTTAATAG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462695 138 - 190850796 AACTATGAGATAATATGTTTATCATTTGAATGAGAATTA--------AAGGGTTATAATTCATACAAAAATGCCTGACACAGACTACTAGGCCCATAAAAGTTGAATGGTTATTTTTAGCTTATATAT--ATCTAAACAGGTTAATAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6534393 138 - 25294431 AACCATGAGATAATATGTTTATCATTTGAATGAGAATTA--------AAGGTTTATAATTCACACAAAAATGCCTGACACAGACTACTATGCCCATAAAAGCTGAGTGGTTATTTTTAGCTTATATAT--ACCCATACAGGTTAATAG i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089023 137 - 6311556 aACCATGAGATAATATGTTGATCATTTGAATGAGAATTA--------AAGGTTTATAATTCATACAAAAATGCCTGACACAGACTACTATGCCCATAAAAGTTGAATGGTTA-TTTTAGCTTATATAT--ACTCATACAGGTTAATAG i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945587 140 + 15034901 AACCATGGGATAATATGTTTATCATTTGAATGAGAATTA--------AAGGTTTATAATTCATACAAAAATGCCTGACACAGACTACTATGCCCATAAAAGTTGAATGGTTATTTTTAGCTTATATATACACCTACACAGGTTAATAG i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 966994 140 - 3201129 AATTATGAGATAATATATTTATGATTTGAATGAGGATTAAT-----TAATGTTTACCATTTATATAAAAATGCATGGTTCAAACTACTATGCCAATAAATGTTGAATAACTATTCTTAGCTTATTTAT--ACTTA-ATCGATTAATAC i otoGar3.GL873702 I 2107 I 10 s dasNov3.JH569232 1787226 146 + 5974691 AATTATGAGATAATACATTTAAATTTCAACTAATAGTTAACTAAAATAATGTTTGGGATTTATATGAAAATGTCCAGCACAATCTACTGTGCACATAAATGCCAACCGACTGTTTTTAGCTTATCAGT--TTTTGCACAGATTGATAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=8852.000000 s hg38.chr9_KI270719v1_random 67747 3 + 176845 ATA s panTro5.chr4 135092536 3 + 194502333 ACA i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428945 3 + 190429646 ATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947953 3 + 189454096 ATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939716 3 - 40319822 ATA i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018502 3 + 135778131 ATA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6017145 3 + 8656713 ATA i colAng1.NW_012114544v1 C 0 I 10 s otoGar3.GL873702 967144 3 - 3201129 ATA i otoGar3.GL873702 I 10 C 0 s dasNov3.JH569232 1787372 3 + 5974691 ATA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e aotNan1.NW_018507635v1 14945727 0 + 15034901 C e cebCap1.NW_016107420v1 4089160 0 - 6311556 C e saiBol1.JH378129 6534531 0 - 25294431 C e calJac3.chr3 129462833 0 - 190850796 C e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=13665.000000 s hg38.chr9_KI270719v1_random 67750 8 + 176845 TATCTTTA s panTro5.chr4 135092539 8 + 194502333 TATCTTTA i panTro5.chr4 C 0 C 0 s rheMac8.chr5 131428948 8 + 190429646 TATCTCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947956 8 + 189454096 TATCTCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939719 8 - 40319822 TATCTCTA i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018505 8 + 135778131 TATCTTTA i chlSab2.chr7 C 0 I 1 s otoGar3.GL873702 967147 8 - 3201129 AATCATTA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1787375 8 + 5974691 AATCTGTA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e aotNan1.NW_018507635v1 14945727 0 + 15034901 C e cebCap1.NW_016107420v1 4089160 0 - 6311556 C e saiBol1.JH378129 6534531 0 - 25294431 C e calJac3.chr3 129462833 0 - 190850796 C e colAng1.NW_012114544v1 6017148 10 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=12.000000 s hg38.chr9_KI270719v1_random 67758 3 + 176845 Ctt- s panTro5.chr4 135092547 3 + 194502333 Ctt- i panTro5.chr4 C 0 C 0 s macFas5.chr5 130947964 3 + 189454096 CTT- i macFas5.chr5 C 0 C 0 s otoGar3.GL873702 967155 3 - 3201129 -TTC i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1787383 0 + 5974691 C e canFam3.chr19 44068591 1406 - 53741614 I e aotNan1.NW_018507635v1 14945727 0 + 15034901 C e cebCap1.NW_016107420v1 4089160 0 - 6311556 C e saiBol1.JH378129 6534531 0 - 25294431 C e calJac3.chr3 129462833 0 - 190850796 C e colAng1.NW_012114544v1 6017148 10 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e chlSab2.chr7 79018513 1 + 135778131 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macNem1.NW_012010911v1 34939727 0 - 40319822 C e rheMac8.chr5 131428956 0 + 190429646 C e nomLeu3.chr7b 90486705 0 - 115148730 C a score=602.000000 s hg38.chr9_KI270719v1_random 67761 3 + 176845 ctt s panTro5.chr4 135092550 3 + 194502333 ctt i panTro5.chr4 C 0 C 0 s otoGar3.GL873702 967158 3 - 3201129 CTC i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1787383 0 + 5974691 C e canFam3.chr19 44068591 1406 - 53741614 I e aotNan1.NW_018507635v1 14945727 0 + 15034901 C e cebCap1.NW_016107420v1 4089160 0 - 6311556 C e saiBol1.JH378129 6534531 0 - 25294431 C e calJac3.chr3 129462833 0 - 190850796 C e colAng1.NW_012114544v1 6017148 10 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e chlSab2.chr7 79018513 1 + 135778131 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macNem1.NW_012010911v1 34939727 0 - 40319822 C e macFas5.chr5 130947967 0 + 189454096 C e rheMac8.chr5 131428956 0 + 190429646 C e nomLeu3.chr7b 90486705 0 - 115148730 C a score=14999.000000 s hg38.chr9_KI270719v1_random 67764 170 + 176845 ttttctttttttttgagacagagtctcactctgcagcccaggttggagtgcagtgacatgatctcggctcactgcaa-ctccgcctcccaagttcacgctatcctcctacctcagcctcctgaatagctgggactacaggtgcccgccaccacgcccgtcttattttttgt s panTro5.chr4 135092553 171 + 194502333 ttttctttttttttgagacggagtctcactctgcagcccaggttggagtgcagtgacatgatctcggctcactgcaagctccgcctcccgagttcacgccattctcctacctcagcctcctgaatagctgggactacaggtgcccgccaccactcctgtcttattttttgt i panTro5.chr4 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1787383 0 + 5974691 C e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967161 0 - 3201129 C e aotNan1.NW_018507635v1 14945727 0 + 15034901 C e cebCap1.NW_016107420v1 4089160 0 - 6311556 C e saiBol1.JH378129 6534531 0 - 25294431 C e calJac3.chr3 129462833 0 - 190850796 C e colAng1.NW_012114544v1 6017148 10 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e chlSab2.chr7 79018513 1 + 135778131 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macNem1.NW_012010911v1 34939727 0 - 40319822 C e macFas5.chr5 130947967 0 + 189454096 C e rheMac8.chr5 131428956 0 + 190429646 C e nomLeu3.chr7b 90486705 0 - 115148730 C a score=2597.000000 s hg38.chr9_KI270719v1_random 67934 15 + 176845 atttttagtagcgat s panTro5.chr4 135092724 15 + 194502333 atttttagtagcgat i panTro5.chr4 C 0 C 0 s dasNov3.JH569232 1787383 15 + 5974691 ACTTTTATCAGAAAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967161 0 - 3201129 C e aotNan1.NW_018507635v1 14945727 0 + 15034901 C e cebCap1.NW_016107420v1 4089160 0 - 6311556 C e saiBol1.JH378129 6534531 0 - 25294431 C e calJac3.chr3 129462833 0 - 190850796 C e colAng1.NW_012114544v1 6017148 10 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e chlSab2.chr7 79018513 1 + 135778131 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macNem1.NW_012010911v1 34939727 0 - 40319822 C e macFas5.chr5 130947967 0 + 189454096 C e rheMac8.chr5 131428956 0 + 190429646 C e nomLeu3.chr7b 90486705 0 - 115148730 C a score=2219.000000 s hg38.chr9_KI270719v1_random 67949 23 + 176845 ggggtttcaccgtgttagccagg s panTro5.chr4 135092739 23 + 194502333 ggggtttcaccgtgttagccagg i panTro5.chr4 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1787398 0 + 5974691 C e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967161 0 - 3201129 C e aotNan1.NW_018507635v1 14945727 0 + 15034901 C e cebCap1.NW_016107420v1 4089160 0 - 6311556 C e saiBol1.JH378129 6534531 0 - 25294431 C e calJac3.chr3 129462833 0 - 190850796 C e colAng1.NW_012114544v1 6017148 10 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e chlSab2.chr7 79018513 1 + 135778131 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macNem1.NW_012010911v1 34939727 0 - 40319822 C e macFas5.chr5 130947967 0 + 189454096 C e rheMac8.chr5 131428956 0 + 190429646 C e nomLeu3.chr7b 90486705 0 - 115148730 C a score=24387.000000 s hg38.chr9_KI270719v1_random 67972 87 + 176845 atggtctcaatctcctgacattgtgatccgcctgcctcagcctcccaaagtgctgggattataggcgcgagccaccgcacccggccA s panTro5.chr4 135092762 87 + 194502333 atggtctcaatctcctgacattgtgatccgcctgcctcagcctcccaaagtgctgggattataggcgcgagccactgcgcccggccA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 36869 87 - 137434 atggtctcaatctcttgacattgtgatccgcctgcctcagcctcccaaagtgctgggattataggcgcgagccaccgcacccggccA i gorGor5.CYUI01000478v1 N 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1787398 0 + 5974691 C e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967161 0 - 3201129 C e aotNan1.NW_018507635v1 14945727 0 + 15034901 C e cebCap1.NW_016107420v1 4089160 0 - 6311556 C e saiBol1.JH378129 6534531 0 - 25294431 C e calJac3.chr3 129462833 0 - 190850796 C e colAng1.NW_012114544v1 6017148 10 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e chlSab2.chr7 79018513 1 + 135778131 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macNem1.NW_012010911v1 34939727 0 - 40319822 C e macFas5.chr5 130947967 0 + 189454096 C e rheMac8.chr5 131428956 0 + 190429646 C e nomLeu3.chr7b 90486705 0 - 115148730 C a score=26895.000000 s hg38.chr9_KI270719v1_random 68059 14 + 176845 ATATATCTTTACTT s panTro5.chr4 135092849 14 + 194502333 ATATATCTTTACTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 36956 14 - 137434 ATATATCTTTACTT i gorGor5.CYUI01000478v1 C 0 C 0 s calJac3.chr3 129462833 14 - 190850796 ATATATCTTTATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6534531 14 - 25294431 ATATATCTTTACTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089160 14 - 6311556 ATATATCTTTACTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945727 14 + 15034901 ATATATCTTTGCTT i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1787398 12 + 5974691 AAATATCTTCAT-- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967161 0 - 3201129 C e colAng1.NW_012114544v1 6017148 10 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e chlSab2.chr7 79018513 1 + 135778131 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macNem1.NW_012010911v1 34939727 0 - 40319822 C e macFas5.chr5 130947967 0 + 189454096 C e rheMac8.chr5 131428956 0 + 190429646 C e nomLeu3.chr7b 90486705 0 - 115148730 C a score=3600.000000 s hg38.chr9_KI270719v1_random 68073 1 + 176845 C s panTro5.chr4 135092863 1 + 194502333 C i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 36970 1 - 137434 C i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131428956 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939727 1 - 40319822 C i macNem1.NW_012010911v1 C 0 C 0 s calJac3.chr3 129462847 1 - 190850796 C i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6534545 1 - 25294431 C i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089174 1 - 6311556 C i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945741 1 + 15034901 C i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1787410 0 + 5974691 C e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967161 0 - 3201129 C e colAng1.NW_012114544v1 6017148 10 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e chlSab2.chr7 79018513 1 + 135778131 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macFas5.chr5 130947967 0 + 189454096 C e nomLeu3.chr7b 90486705 0 - 115148730 C a score=10010.000000 s hg38.chr9_KI270719v1_random 68074 2 + 176845 TT s panTro5.chr4 135092864 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 36971 2 - 137434 TT i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131428957 2 + 190429646 TT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939728 2 - 40319822 TT i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018514 2 + 135778131 TT i chlSab2.chr7 I 1 C 0 s colAng1.NW_012114544v1 6017158 2 + 8656713 TT i colAng1.NW_012114544v1 I 10 C 0 s calJac3.chr3 129462848 2 - 190850796 TT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6534546 2 - 25294431 TT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089175 2 - 6311556 TT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945742 2 + 15034901 TT i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1787410 0 + 5974691 C e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967161 0 - 3201129 C e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macFas5.chr5 130947967 0 + 189454096 C e nomLeu3.chr7b 90486705 0 - 115148730 C a score=280574.000000 s hg38.chr9_KI270719v1_random 68076 51 + 176845 ATAAGAAATGAGTAACTTTATTAATTCTACCAACAGATAACATTCTTCCTC s panTro5.chr4 135092866 51 + 194502333 ATAAGAAATGAGTAACGTTATTAATTCTACCAACAGATAACATTCTTCCTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 36973 51 - 137434 ATAAGAAATGAGTAACTTTATTAATTCTACCAACAGATAACATTCTTCCTC i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131428959 51 + 190429646 ATAAGAAATGAATAACTTTATTAATTCTACCAACATATAACATTCTCCCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130947967 51 + 189454096 ATAAGAAATGAATAACTTTATTAATTCTACCAACATATAACATTCTTCCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939730 51 - 40319822 ATAAGAAATGAATAACTTTATTAATTCTACCAACATATAACATTCTTCCTC i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018516 51 + 135778131 ATAAGAAATGAGTAACTTTATTATTTCTACCAACATATAACATTCTTCCTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6017160 51 + 8656713 ATAAGAAATGAGTAACTTTATTAATTCTACCAACATATAACATTCTTCCTC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462850 51 - 190850796 ATAAGAAAGGAGTAACTTTATTAATTCTAGCAACATATAACTTTCTTCCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6534548 51 - 25294431 ATAAGAAATGAGTAACTTTATTAATTCTACCAACATATGGCATTCTTCCTC i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089177 51 - 6311556 ATAAGAAATGAGTAACTTTATTAATTCTACCAACATATAACATACTTCCTC i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945744 48 + 15034901 ATAAGAAATGAGTAACT---TTAATTCTACCAACATATAACATTCTTTCTC i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1787410 28 + 5974691 --------------------TTAATTCTACCAAGAGATACTAATCTTA--- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967161 0 - 3201129 C e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=686435.000000 s hg38.chr9_KI270719v1_random 68127 118 + 176845 TCAGAGAGTAATATGCAATCATTTCCTAAC-CTTATTTTATTGCGCTATATTTTAAATATAATAAAC--GTGTCAAAAATGTG--GTTTCGTAC---------TTTTTATAAA---------TTGATATATTTACCTAATT s panTro5.chr4 135092917 118 + 194502333 TCAGAGAGTAATATGCAATCATTTCCTAAC-CTTATTTTATTGCGCTATATTTTAAATATAATAAAC--GTGTCAAAAATGTA--GTTTCGTAC---------ATTTTATAAA---------TTGATATATTTACCTAATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 37024 118 - 137434 TCAGAAAGTAATATGCAATCATTTCCTAAC-CTTATTTTATTGCGCTATATTTTAAATACAATAAAC--GTGTCAAAAATGTG--GTTTCGTAC---------TTTTTATAAA---------TTGATATATTTACCTAATT i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131429010 118 + 190429646 TCAGAGAGTAACATGCAATCGTTTCCTAAC-CTTATTTTATTGTGCTATATTTTGAATATAATAAAC--ATGTCAAAAATGTA--GTTTCATAC---------TTTTTAGAAA---------CTGATGTATTTACCTAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130948018 118 + 189454096 TCAGAGAGTAACATGCAATCGTTTCCTAAC-CTTATTTTATTGTGCTATATTTTGAATATAATAAAC--GTGTCAAAAATGTA--GTTTCATAC---------TTTTTAGAAA---------CTGATGTATTTACCTAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939781 120 - 40319822 TCAGAGAGTAACATGCAATCATTTCCTAAC-CTTATTTTATTGTGCTATATTTTGAATATAATAAACATGTGTCAAAAATGTA--GTTTCATAC---------TTTTTAGAAA---------CTGATGTATTTACCTAACT i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018567 120 + 135778131 TCAGAGAGTAACATGTAATCGTTTCCTAAC-CTTATTTTATTGTGCTATATTTTGAATATAATAAACATGTGTCAAAAATGTA--GTTTCATAC---------TTTTTAGAAA---------TTGATGTATTTACCTAACT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6017211 120 + 8656713 TCAGAGAGTAACATGCAATCGTTTCCTAAC-CTTATTTTATTGTGCTATATTTTGAATATAATAAACATGTGTCAAAAATGTA--GTTTCATAC---------TTTTTAGAAA---------TTGATGTATTTACTTAACT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129462901 120 - 190850796 TCAGAGAGTAACATGCAGTCATTTCCTTAC-TTTACGTTATTGtattatattttaaatataataaaC--GTGTCAAAAATGTACCGTTTCATAC---------CTTTTATAAA---------TTGATATATTTATCTAACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6534599 120 - 25294431 TCAGAGAATAATATGCAGTCATTTCCTTAC-CTTATATTATTGTGTTATATTTTCAATATAATAAAC--GTGTTAAAAATGTACAGTTTCACAC---------TTTTTATAAA---------TTGATATATTTATCTAACT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089228 120 - 6311556 TCAGAGAATAATATGCAGTCATTTCCTTAC-TTTACGTTATTGTGTTATATTTTAAATATAATAAAC--ATGTTAAAAATGTACGGTTTCATAC---------TTTTTATAAA---------TTGATATATTTATCTAACT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945792 120 + 15034901 TCAGAGAGTAATATGCAGTCATTTCCTTAC-TTTACGTTATTGTGTTATATTTTAAATATAATAAGC--ATGTCAAAAATGTACAGTTTCATAC---------CTTTTATAAA---------TTGATATATTTATCTAACT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 967161 127 - 3201129 TCAGAGAGTAATATACACTCATTG-CTAAA-CTCATTTTATTGTGCTATATTTTGTATATAA-ACAC--ATATC-AAACTTTACAGTTTCATAC--------ATTTTTATTAAGTAAAATTGTTGACATTTTTATCTAACT i otoGar3.GL873702 C 0 I 11685 s dasNov3.JH569232 1787438 121 + 5974691 TCAGAGAATAACA-------GTTTTCTGATACTCATTTCATTGTGCTGTATCTAATAGacaataata--atcacatacattta--aatgtatattatgctcaatttttataaa---------ctgatatccttatgtaatt i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=540232.000000 s hg38.chr9_KI270719v1_random 68245 117 + 176845 ---ACACTAAATCTAGAAAATACTATTGTGCTTATTCAAACTTCTCTTCTCTTCTTCAGAGGCAAACCTGTATAAtttct----ttg----gtttgtttgttttaagacgtagtcttactctgttacc s panTro5.chr4 135093035 121 + 194502333 ---ACACTAAATCTAGAAAATACTATTGTGCTTATTCAAACTTCTCTTCTCTTCTTCAGAGGCAAACCTGTATAAtttct----ttggtttgtttgtttgttttaagacgtagtcttactctgttacc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 37142 121 - 137434 ---ACACTAAATCTAGAAAATACTATTGTGCTTATTCAAACTTCTCTTCTCTTCTTCAGAGGCAAACCTGTATAAtttct----ttggtttgtttgtttgttttaagacgtagtcttactctgttacc i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131429128 116 + 190429646 ---ACACTAAATGTAGAAAATACTATTGTGCTTATTCAAA-----CTTCTCTTCTTCAGAGGCAAGCCTTTATAATTTAT----CTTGtttgtttgtttgttctaagacagagtcttactctgttgcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130948136 116 + 189454096 ---ACACTAAATGTAGAAAATACTATTGTGCTTATTCAAA-----CTTCTCTTCTTCAGAGGCAAGCCTTTATAATTTAT----CTTGtttgtttgtttgttctaagacagagtcttactctgttgcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34939901 116 - 40319822 ---ACACTAAATGTAGAAAATACTATTGTGCTTATTCAAA-----CTTCTCTTCTTCAGAGGCAAGCCTTTATAATTTAT----CTTGtttgtttgtttgttctaagacagagtcttactctgttgcc i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018687 116 + 135778131 ---ACACTAAATGTAGAAAATACTATTGTGCTTATTCAAA-----CTTCTCTTCTTCAGAGGCAAGCCTTTATAAtttat----tttgtttgtttgtttgttctaagacagagtcttactctgttgcc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6017331 120 + 8656713 ---ACACTAAATCTAGAAAATACTATTGTGCTTATTCAAA-----CTTCTCTTCTTCAGAGGCAAGCCTTTATAAtttattttgcttgtttgtttgtttgttctaagacagagtcttactctgttgcc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129463021 116 - 190850796 ---ACACTAAATCTAGGAAATGCTATTGTACTTATTCAAACTTCTCTTCTCTTCTTCAGAGGCAGGACTTTGTAAtttct--------tttgtttg-ttgttttaaaataggttctcactctgttgcc i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6534719 106 - 25294431 ---ACACTAAATCTAGAAAATGC-----------TTCAAACTTCTCTTCTTTTCTTAAGAGACAAGCCCTTATAAtttct--------tttgtttgtttgttttaaaacagattctcactctgttgcc i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089348 117 - 6311556 ---ACACTAAATCTAGAAAATGCTATTGTACTTATTCAAACTTCTCTTCTCTTCTTCAGAGGCAAGCCTTTATAAtttct--------tttgtttgtttgttttaaaacagattctcattctgttgcc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14945912 117 + 15034901 ---ACACTAAATCTAGAAAATGCTATTGTACTTATTCAAACTTCTCTTCTCTTCTTCAGAGGCAAGACTTTGTAAtttcc--------tttgtttgtttgttttaaaatagattctcactctgttgcc i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1787559 75 + 5974691 accac-ccaaacacaaaaaattttcttgtgcctattcaggaaattcttctccattcccaagtcatgctctattaat---------------------------------------------------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=548430.000000 s hg38.chr9_KI270719v1_random 68362 108 + 176845 caggctagagtgcagtggtacaatgtgaggtcactgcaacctccgcctcccgggttcaagcgattctccggcttcagcatcccaattaactcggattaAACCCttata s panTro5.chr4 135093156 108 + 194502333 caggctagagtgcagtggtacaatgtgagctcactgcaacctccgcctcccgggttcaagcgattctccggcttcagcaccccaaataactcggattaAACCCTCAta i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 37263 107 - 137434 caggctagagtgcagtggtacaatgtgaggtcactgcaacctccgcctcccgggttcaagcgattctccggcttcagcatcccaaataactcagattaAACCCTTA-A i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131429244 108 + 190429646 caggctagagtgcagtggtacaatgtgagctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcgtaccaaataacttggattaAATCCttata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130948252 108 + 189454096 caggctagagtgcagtggtacaatgtgagctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcgtaccaaataactcggattaAATCCTTATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34940017 108 - 40319822 caggctagagtgcagtggtacaatgtgagctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcgtaccaaataactcggattaAATCCttata i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018803 108 + 135778131 caggctagagtgcagtggtacaatgtgagctcactgcaacctccacctcccgagttcaagtgattctcctgcctcagcgtaccaaataactaggattaAATCCttatg i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6017451 108 + 8656713 caggctagagtgcagtggtacaatgtgagctcactgtaacctccacctcctgggttcaagtgactctcctgcctcagtgtaccaaataactcagattaAATCTttatg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129463137 108 - 190850796 caggctagagtgcagtggggcaatgtgagctcactacaacctccgtctcttgggttcaagggattctctggcctgagcatctcaaatagctaggattaAATCCCTAta i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6534825 108 - 25294431 caggctagagtgcagtggggtaatgtgagctcactgcaacttccacctcctggcttcaagtgattctctggcctgagcatctcaaatagctaagatAAAacccttata i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089465 108 - 6311556 caggctagagtgcagtggggtactgtgagctcactgcaacttccacctcctgggttcaagtgattctctggcctgagcatctcaaatagctaggattaAACCCttata i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14946029 108 + 15034901 caggctaaagtgcagtggggcaatgtgagctcactgcaacctctgcctcctggattcaagtgattctctggcctgagcatctcaaatagctaggattaAATTCCTAta i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1787634 0 + 5974691 C e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=2141460.000000 s hg38.chr9_KI270719v1_random 68470 407 + 176845 atttctatcatgattgattaattttgttcatcttcaaattccaataattagaattcc-tacagga--tgtgtgtgtgagtgtgtatctggtttattttctttagcataaataaatatttgagatttagccaaatatttgtgcgtatcatttgtttatttttcctca----tatttctgagttgcctatgtatttgtcagagtttgcttattcattagtctgttagtgaatattcagattgctttcagaattagcttttacaaataaaggacttaggtacattctcaaacaggtttttgtgtaaatatatgcttttatttttgttggataaatttcta------------------gaattga-aattgctgtgctatagggtagatatatgttggccttatttagaagcgaattatttttcaaagcggttgtt s panTro5.chr4 135093264 400 + 194502333 atttctatcatgattg----attttgttcatcttcaaattccaataattagaattcc-tacagga--tgtgtgtgtgagcgtgtatccggtttattttctttagcataaataaatatttgagatttagccaaatatttgt--gtatcatttgtttacttttcctca----tatttctgagttgcctatgtatttgtcagagtttgcttattcattagtctgttagtgaatattcagattgctttcagaattagctttta-aaataaaggacttaggtgcattctcaaacaggtttttgtgtaaatatatgctttcatttttgttggataaatttcta------------------gaattga-aattgctgtgctatagggtagatgtatgttggccttactgagaagcaaattatttttcaaagcggttgtt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 37370 407 - 137434 atttctatcatgattgattaattttgttcatcttcaaattccaataattagaattcc-tacagga--tgtgtgtgtgagtgtgtatctggtttattttctttagcataaataaatatttgagatttagccaaatatttgtgtgtatcatttgtttatttttcctca----tatttctgagttgcctatgtatttgtcagagtttgcttattaattagtctgttagtgaatattcagattgctttcagaattagcttttacaaataaaggacttaggtgcattctcaaacaggtttttgtgtaaatatatgcttttatttttgttggataaatttcta------------------gaattga-aattgctgtgctatagggtagatgtatgttggccttattgagaagcgaattatttttcaaagcggttgtt i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131429352 402 + 190429646 atttctatcatgattgattagttttgttcatcttcaaattccaataattagaattcc-tacaggatgtgtgtgtgtgagtgcgtatctggtatattttgtttagcaaaaatatgtattggagatttagccaaatatttgtctgtatca----tttatttttcttca----tatttctgagttgccta--tatttgtcagagtttgcttattc-ttactctgttagtgaatattcagattgctttcagaattagcttttacaaataaagcacttaggtgcgttctcaaacaggtctttgtgtaagtatgtgcttttatttttgttggatacatttcta------------------gaattga-aattgctgtgctataggatagatgtacgttggctttattgagaagtgaattatttttcaaagtagttgtt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130948360 402 + 189454096 Gtttctatcatgattgattagttttgttcatcttcaaattccaataattagaattcc-tacaggatgtgtgtgtgtgagtgcgtatctggtatattttgtttagcaaaaatatgtattggagatttagccaaatatttgtctgtatca----tttatttttcttca----tatttctgagttgccta--tatttgtcagagtttgcttattc-ttactctgttagtgaatattcagattgctttcagaattagcttttacaaataaagcacttaggtgcgttctcaaacaggtctttgtgtaagtatgtgcttttatttttgttggatacatttcta------------------gaattga-aattgctgtgctataggatagatgtacgttggctttattgagaagtgaattatttttcaaagtagttgtt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34940125 398 - 40319822 atttctatcatgattgattagttttgttcatcttcaaattccaataattagaattcc-tacagcatgtgtgtgtgtgagtgagtatctggtatattttgtttagcaaaaatatgtattggagatttagccaaatatttgtctgtatca----tttgtttttcttca----tatttctgagttgccta--tatttgtcagagtttgcttattc-ttactctgttagtgaatattcagattgctttcagaattagcttttacaaataaagcacttaggtgcgttctcaaacaggtctttgtgtaa----gtgcttttatttttgttggatacatttcta------------------gaattga-aattgctgtgctataggatagatgtacgttggctttattgagaagtgaattatttttcaaagtagttgtt i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79018911 405 + 135778131 atttctatcatgattgattagttttgttcatcttcaaattccaataattagaattcc-tacaggatgtgtgtgtgtgagtgcgtatctggtatattttgtttagcaaaaataagtattggagatttagccaaatatttgtctgtatca----tttatttttcttca----tatttctgagttgcctatgtatttgtcagagtttgcttattcattactctgttagggtatattcagattgctttcagaattagcttttacaaataaagcacttaggtgtgttctcaaacaggtctttgtgtaagtatgtgcttttatttttgttggatacatttcta------------------gaattga-aattgctgtgctataggatagatgtacgttggctttattgagaagtgaattatttttcaaagtagttgtt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6017559 405 + 8656713 atttctatcatgattgattagttttgttcatcttcaaattccaataattagaattcc-tacaggatgtgtgtgtgtgagtgtgtatctggtatattttgtttagcaaaaataagtattggagatttagccaaatatttgtctgtatcg----tttatttttcttca----tatttctgagttgcctatgtatttgtcagagtttgcttattcattactctgttagtgaatattcagattgctttcagaattggcttttataaataaagcacttaggtgcgttctcaaacaggtctttgtgtaagtatgtgcttttatttttgttggatacatttcta------------------gaattga-aattgctgtggtatagggtagatacacgttggccttattgagaagtgaattatttttcaaagtagttgtt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129463245 397 - 190850796 atttctatcatgattgattaattttgttcatcttcatattccaatgattaaaattcc-tataaaa--tgtgtgtgtgggtatgtatctggtttcttttgtttagcataaa----tatttgagatttagccacacatttgtctgcattg----tttctcattcctca----tatttctgagttgcctatgtatttgtcagagtttgcatattcatttctctgttagtgaatattcagattactttcaaaactagcttttacaaatgaaatatttaggtgcattctcaaacaggtcattgtgtaaatatgt--ttttattttagttgcataaattccta------------------gaattga-aattgctgtgctatatggtagataaatgttggacttattaagaagtgaattatttttcaaagcagttatt i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6534933 399 - 25294431 atttctatcatgattgattaattttgttcatcttcaaattccagtgattagaattcc-aataagatgtgtgtgtgtgggtatgtatccggtttcttttgtttagcataaa----tagttgagatttagccacgtatttgcctgtattg----tttcttgttcctca----tatttcagagttgcctatgtatttgtcagagtttgcatattcattcctctgttagtgaatattcagattgctttcagaaatagcttttacaaatgaaatgtttaggtgcattctcaaacaggtctttgtgtaaatatgt--ttttatttttgttgcataaattccta------------------gaattga-aatttctgtgctatatggtagataaatgttggacttactaagaagtgaattatttttcaaagtggttgtt i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4089573 397 - 6311556 atttttatcatgattgattaattttgttcatcttcaaattccaatgattagaattcc-tataaga--tgtgtgtgtgggtatgtatctggtttcttttgtttagcataaa----tatttgagatttagcaacatatttgtctgttttg----tttcttgtttctca----tatttctgagttgcccatgtacttgtcagagtttgcatattcattcctctgttagtgaatattcaaattgctttcagaactagcttttacaaatgaaatatttaggagcattctcaaacaggtctttgtgtaaatatgt--ttttatttttgttgcataaattccga------------------gaattaa-aattgctgtgctatatggtagataaatgttggacttattaagaagtgaattatttttcaaagtggttgtt i cebCap1.NW_016107420v1 C 0 I 4707 s aotNan1.NW_018507635v1 14946137 397 + 15034901 atttctatcatgattgattaattttgttcatcttcaaattccaatgattagaattcc-tatcaga--tgtgtgtgtgggtatgtatctggtttcttttgtgtagcataaa----tatttgagatttagccacatatttgtctgtattg----tttcttgtgcctca----tatttctgagttgcctatgtatttgtcagagtttgcatattcattcctctgttagtgaatattcagattactttcagaactagcttttacacatgaaatatttgggtgcattctcaaacaggtctttgtgtaaatatgt--ttttatttttgttgcataaattccta------------------gaattga-aattgctgtgctataaggtagataaatgttggacttattaagaagagaattatttttcaaagcagttgtt i aotNan1.NW_018507635v1 C 0 I 4665 s dasNov3.JH569232 1787634 398 + 5974691 atttatatcttaa--gattag-tttgcctatctcaaatgtcctataattgaaattccttacagga--tgt---tttgtgtatctgtctggttccttttgttaag----------gatatgaaattcattcaaatgtatgtctatatcactagttttcctttcccccttattatttctg------------atttgtcagaattagtttattcattccattgtgaatggacatttggattgcttttagaatttgcttctacaaataaa-cactctga-gcattctcatacaagtctttttataaaaatgt--ttttatttcttttgaataaatttctaagtgtgaaatctcctagtgaatttataatcactgggttata-ggtaggtatatatttaaattatgatgaaacaaattattttccagtgtggctata i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=2080.000000 s hg38.chr9_KI270719v1_random 68877 7 + 176845 ccgcttt--- s panTro5.chr4 135093664 4 + 194502333 ccgc------ i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 37777 4 - 137434 ccgc------ i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131429754 4 + 190429646 ccat------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130948762 4 + 189454096 ccat------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34940523 4 - 40319822 ccat------ i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79019316 4 + 135778131 ccat------ i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6017964 4 + 8656713 ccat------ i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129463642 4 - 190850796 acat------ i calJac3.chr3 C 0 I 4479 s saiBol1.JH378129 6535332 4 - 25294431 tcat------ i saiBol1.JH378129 C 0 I 3435 s dasNov3.JH569232 1788032 7 + 5974691 ccat---ttt i dasNov3.JH569232 C 0 I 39 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=354867.000000 s hg38.chr9_KI270719v1_random 68884 183 + 176845 ttttttttttttt---tt--------------tttttttttttttttttttgagacacagtctcgcgctgtcgcccgggctggagtgcactggcgtgatctgggctcaccgcaagctccacttctcaggttcacgccattctcctgcctcagcttcctgattagttgggactacaggcgcccgccaccacacccgtcta---a s panTro5.chr4 135093668 175 + 194502333 -----------tt---tt--------------tttttttttttttttttttgagacacagtctcgcgctgtcgcccaggctggagtgcactggcgtgatctgggctcaccgcaagctccacttctcaggttcacgccattctcctgccgcagcttcctgatgagttgggactacaggcgcccgccaccacacccggctatttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 37781 173 - 137434 -----------tt---tt--------------tttttttttttttttttttgagacacagtctcgcgctgtcgcccgggctggagtgcactggcgtgatctgggctcaccgcaagctccacttctcaggttcacgccattctcctgcctcagcttcctgattagttgggactacaggcgcccgccaccacacccggcta--at i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131429758 173 + 190429646 -----------tt---ttgttgttg-------ttgtttgtttgtttgttttgagacagagtcttgctctgtcgcccagcctggagtgcagtggtgtgatctgggctcactgcaagctccacctctcgggttcgcaccattctcctgcctcagcctcc-----agctgggactacaggcgccagccaccacgcccggcta---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130948766 173 + 189454096 -----------tt---ttgttgttg-------ttgtttgtttgtttgttttgagacagagtcttgctctgtcgcccagcctggagtgcagtggtgtgatctgggctcactgcaagctccacctctcgggttcgcaccattctcctgcctcagcctcc-----agctgggactacaggcgccagccacgacgcccggcta---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34940527 173 - 40319822 -----------tt---ttgttgttg-------ttgtttgtttgtttgttttgagacagagtcttgctctgtcgcccagcctggagtgcagtggtgtgatctgggctcactgcaagctccacctctcgggttcgcaccattctcctgcctcagcctcc-----agctgggactacaggcgccagccaccacgcccggcta---- i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79019320 176 + 135778131 -----------ttttgttgttgttg-------ttgttcgtttgtttgttttgagacagagtcttgctctgtcgcccagcctggagtacagtggtgtgatctgggctcactgcaagctccacctcccaggttcacactattctcctgcctcagcctcc-----agctgggactacaggcgcctgccaccacgtccggcta---- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6017968 180 + 8656713 -----------tt---ttgttgttgttgttgtttgtttgtttgtttgttttgagacagagtcttgctctgtcgcccagcctggagtgcagtggcgtgatctgggctcactgcaaactccacctcccaggttcatgccattctcctgccttagcctcc-----agctgggactacaggtgcccgccaccatgcccggcta---- i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788039 39 + 5974691 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=42443.000000 s hg38.chr9_KI270719v1_random 69067 27 + 176845 ttttttttttttttttgtatttttagt s panTro5.chr4 135093843 27 + 194502333 ttttttttttttttttgtatttttagt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 37954 27 - 137434 ttttttttttttttttttttttttagt i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131429931 18 + 190429646 ---------attttttgtatttttagt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130948939 18 + 189454096 ---------attttttgtatttttagt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34940700 18 - 40319822 ---------attttttgtatttttagt i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79019496 18 + 135778131 ---------attttttgtatttttagt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6018148 18 + 8656713 ---------attttttgtatttttagt i colAng1.NW_012114544v1 C 0 C 0 s dasNov3.JH569232 1788078 27 + 5974691 ttctttgctaatatttgtactgtcaat i dasNov3.JH569232 I 39 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=265390.000000 s hg38.chr9_KI270719v1_random 69094 120 + 176845 agagacggggtttcaccatgttagccaggatagtctcgatctcatgaccccgtgatccacccgcctcggccccccaaagtgctgtgattacaggcatgagccaccgcgcccagccggttg s panTro5.chr4 135093870 120 + 194502333 agagacggggtttcaccatgttagccaggatagtctcgatctcatgaccccgtgatccgcccgcctcggccccccaaagtgctgggattacaggcatgagccaccgcacccagccggttg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 37981 120 - 137434 agagacggggtttcaccatgttagccaggatagtctcgatctcatgaccccgtgatccgcccgcctcggccccccaaagtgctgggattacaggcatgagccaccgcgcccagccggttg i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131429949 119 + 190429646 ggagactgagtttcactgtgttagccaggatggtctggatctcctga-cccgtgatccgcccgcctggatcccccaaagtgctgggattacaggcgtgagccactgcaccccaccgattg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130948957 119 + 189454096 ggagattgagtttcactgtgttagccaggatggtctggatctcctga-cccgtgatccgcccgcctggatcccccaaagtgctgggattacaggcgtgagccgctgcaccccaccggttg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34940718 119 - 40319822 ggagattgagtttcactgtgttagccaggatggtctggatctcctga-cccgtgatccgcccgcctggatcccccaaagtgctgggattacaggcgtgagccactgcaccccaccggttg i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79019514 119 + 135778131 ggagactgagtttcactgtgttagccaggatggtctggatctcctga-cccatgatccgcccgcctggatcccccaaagtgctgagatgacaggcgtgagtcactacaccccaccggttg i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6018166 119 + 8656713 ggagactgagtttcactttgttagccaggatggtctggatctcctga-cccgtgatccgcctgcctggatcccccaaagtgctgggattacaggcatgagccactgcgccccaccggttg i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788105 0 + 5974691 C e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=1452315.000000 s hg38.chr9_KI270719v1_random 69214 590 + 176845 ttctattttacactctcacaagaaatagacatgacttctagtttccccacatatttgccaatattagtattatcattttaaatggtagtctttccagtttcaatgcattttggttgcatttccccttatctaataatattgagcatcttttcacattcctataagccacttgtatctcttgttttgtgaaatacctgttcaaga--ttcttataactatttagtggatctcaggagtactctgtgcgttttgaacacgcaatttttt------------tc-tcatacatatatggaataatttatcacagtctatggcttaaaattatattttcttacattttgcagttttattaggatacatttttaattaatatctacaatttatcaatttttactcttatgat---agtgctttctctgttcagaaatatttttcctattataatagctcacagatattgtttaa--tttttttcttttaaaagctttctgaattttgctttttcatttttatgcctacattaaaaatatcggattagttttgtgtat---------acaaaggactgatgcatgtattt-ttttaatatgagaatgcatttatttcaaaagcctt s panTro5.chr4 135093990 590 + 194502333 ttctattttacactctcacaagaaatagacacgacttctagtttccccacatatttgccaatattagtattatcattttaaatgttagtctttccagtttcaatgcattttggttgcatttccccttacctaataatattgagcatcttttcacattcctgtaagccacttgtatctcttgttttgtgaaatacctgttcaaga--ttcttataactatttagtggatctcaggagtactctgtgcgttttgaacacgcaatttttt------------tc-tcatacatatatggaataatttatcacagtctatggcttaaaattatattttcttacattttgcagttttattaggatacatttttaattaatatctacaatttatcaatttttactcttatgat---agtgctttctctgttcagaaatatttttcctattataatagctcacagatattgtttaa--tttttttcttttaaaagctttctgaattttgctttctcatttttatgcctacattaaaaatattggattagttttgtgtat---------acaaaggactgatgcatgtattt-ttttaacatgagaatgcacttatttcaaaagcctt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 38101 590 - 137434 ttctattttacactctcacaagaaatagacacgacttctagtttccccacatatttgtcaatattagtattatcattttaaatggtagtctttccagtttcaatgcattttggttgcatttccccttatttaataatattgagcatcttttcacattcctataggccacttgtatctcttgttttgtgaaacacctgttcaaga--ttcttataactatttagtggatctcaggagtactctgtgcgttttgaacacgcaatttttt------------tc-tcatacatatatagaataatttaacacagtctatggcttaaaattatattttcttacattttgcagttttattaggatacatttttaattaatatctacaatttatcaatttttactcttatgat---agtgctttctctgttcagaaatatttttcctattataatagctcacagatattgtttaa--tttttttcttttaaaagctttctgaattttgctttttcatttttatgcctacattaaaaatattggactagttttgtgtat---------acaaaggactgatgcatgtattt-ttttaatatgagaatgcatttatttcaaaagcctt i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131430068 587 + 190429646 ttctattttacactctcacaa-aaatagacacaatttctagtttccccacatatttgtcaatattagtattatcattttaaatgttagtccttccgatttcaatgcattttggttgcatttccccttacctaataatattgagcatcttttcacattcttttaagccacttgtatctcttattttatgaaacacctgttcaaga--ttcttataactatttAGTGGATCTCAAGATTActttgtgcagtttgaacatgcaatttttt------------tt-tcatgtatatatggaataatttatcacagtctatgacttaaaattatattttcttacattttgcagttttattaggatacatttttaattaatatctacaatttatccatttttactc--ataat---agtgctttctctgttcaaaaatatttttcctattataatagttcacagatatt-tttaa--tttttttcttttaaaagctttctgaattttactttttcatttttatgcctatattaaaaatactggattagttttgtgtat---------acaaagaactgatgtatatatttgttttaatatgagaacgcatttatttcaaaagcctt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130949076 587 + 189454096 ttctattttacactctcacaa-aaatagacacaatttctagtttccccacatatttgtcaatattagtattatcattttaaatgttagtccttccgatttcaatgcattttggttgcatttccccttacctaataatattgagcatcttttcacattcttttaagccacttgtatctcttattttatgaaacacctgttcaaga--ttcttataactatttagtggatctcaagattactttgtgcagtttgaacatgcaatttttt------------tt-tcatgtatatatggaataatttatcacagtctatgacttaaaattatattttcttacattttgcagttttattaggatacatttttaattaatatctacaatttatccatttttactc--ataat---agtgctttctctgttcaaaaatatttttcctattataatagttcacagatatt-tttaa--tttttttcttttaaaagctttctgaattttactttttcatttttatgcctatattaaaaatactggattagttttgtgtat---------acaaagaactgatgtatatatttgttttaatatgagaacgcatttatttcaaaagcctt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34940837 586 - 40319822 ttctattttacactctcacaa-aaatagacacaatttctagtttccccacatatttgtcaatattagtattatcattttaaatgttagtccttccgatttcaatgcattttggttgcatttctccttacctaataatattgagcatcttttcacattcttttaagccacttgtatctcttattttatgaaacacctgttcaaga--ttcttataactatttAGTGGATCTCAAGATTActttgtgcagtttgaacatgcaatttttt------------tt-tcatgtatatatggaataatttatcacagtctatgacttaaaattatattttcttacattttgcagttttattaggataca-ttttaattaatatctataatttatccatttttactc--ataat---agtgctttctctgttcaaaaatatttttcctattataatagttcacagatatt-ttcaa--tttttttcttttaaaagctttctgaattttactttttcatttttatgcctatattaaaaatactggattagttttgtgtat---------acaaagaactgatgtatatatttgttttaatatgagaacgcatttatttcaaaagcctt i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79019633 588 + 135778131 ttctattttacactctcacaagaaatagacacaatttctagtttctccacatatttgtcaatattagtattatcattttaaatgttagtccttccgatttcaatgcattttggttgcatttccccttacctaataatattgagcatcttttcacattcttataagccacttgtatctcttattttatgaaacacctgttcaaga--ttcttataactatttagtggatctcaagattactttgtgcagtttgaacatgcaatctctt------------ttgtcatgtatatatgaaataatttatcacagtctatggcttaaaattatattttcttacattttacagttttattaggatacatttttaattaatatctacaatttatccatttttactc--ataat---agtgctttctatgttcaaaaatatttttcctattataatagttcacagatatt-tttaa--tttttttttttt-aaagctttctgaattttactttttcatttttatgcctatattaaaaatactggattagttttgtgtat---------acaaagaactgatgtatatatttgttttaatatgagaatgcatttatttcaaaagcctt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6018285 589 + 8656713 ttctcttttacaatctcacaagaaatagacacaatttctagtttccccacatatttgccaatattagtattatcattttaaatgttaatccttctgatttcaatgcattttggttgcatttcaccttacctaataatattgggcatctttaaaaatttttataagccacttgtatctcttattttgtgaaacacctgttcaaga--ttcttataactatttAGTGGATCTCAATATTActttgtgcagtttgaacatgcaatttttt------------ta-tcatgtgtatatggaataatttatcacagtctatggcttaaaattatattttcttacattttgcagttgtattaggatacatttttaattagtatctacaatttatccatttttactc--ataat---agtgctttctctgctcaaaaatatttttcctattataataattcacagatatt-tttaatttttttttcttttagaagctttctgaattttac-ttttcatttttatgcctatattaaaaatactggattaattttgtgtat---------acgaagaactaatgtatatatttgttttaatatgagaatgcatttatttcaaaagcttt i colAng1.NW_012114544v1 C 0 C 0 s dasNov3.JH569232 1788105 514 + 5974691 ttttctttta-atttttac---------------cttctagtggc---------------acatta-------catttttagtg-------------------tgcat----------tttcctcatgtataatgattttgagtactatttcatgctcttataacccatttgtatatcacatatagtggaatatcttttcaaaaaccttttgcatgtatttagtgagcagcaag---actctaaatattttggacat-caattctttgtcatatatacatg-ctatatatatatggact-attttccgtattctgtggtttaaaatttcattttcttttgttgttc---tttatttgggtatatttttaacttacat----gaatcatcaagttttacccctgtgattcgtgtgcattctgtattctaagatattttgcttactacaagatcacaaagatatc-tcatg---------------------ttgtGGATTGAGCTTTTTTA--TCCATGTCTATGTTCAAAGTATCAAATTCCTTCTGTGTATAAAATTTTAACTAAGTACTGATTTACATACAT-TTTTCACATGAAAATG-GGTTGTTTCAGAACAACT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e nomLeu3.chr7b 90486705 0 - 115148730 C a score=29448.000000 s hg38.chr9_KI270719v1_random 69804 9 + 176845 tgttaaaga s panTro5.chr4 135094580 9 + 194502333 tgttaaaga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 38691 9 - 137434 tgttaaaga i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90486705 9 - 115148730 TGTTAGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131430655 9 + 190429646 tgttagaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130949663 9 + 189454096 tgttagaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34941423 9 - 40319822 tgttagaga i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79020221 9 + 135778131 tgttagaga i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6018874 9 + 8656713 tgtttgaga i colAng1.NW_012114544v1 C 0 C 0 s dasNov3.JH569232 1788619 9 + 5974691 TATTATAAA i dasNov3.JH569232 C 0 I 25244 e micMur3.chr14 66975454 0 + 93316391 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I a score=958462.000000 s hg38.chr9_KI270719v1_random 69813 331 + 176845 cttactttc-cccactgaattatctacatgcccttataaacatttaatttactgcataggtggaggtctaattttgaacccatctttatccttattatttttgtgttatgatgctttgatactgcagctttcttagatgtctgaaaattggctc---tatttttttctcaaaattctaggtcctatgaattttccaaacaaa-ttttggaaacagcttgtgaatttctctcaaaatgtttgccacaatttactacagagttgtagtaaatagatatagaattcattgtagtcaataaattacaaac--tatagattgcattgatgc------tttttttttttt s panTro5.chr4 135094589 335 + 194502333 cttactgtc-cccactgaattatctacatgcccttataaacatttaatttactgcataggtggaggtctaattttgaacccttctttatccttattatttttgtgttatgatgttttgatactgcagctttcttagatgtctgaaaattggctc---tatttttttctcaaaattctaggtcctatgagttttccaaacaaa-ttttggaaacagcttgtgcatttctctcaaaatgtttgccacaatttactacagagttatagtaaatagatatagaattcattgtagtcaataaattacaaactatatagattgcattgatgc----tttttttttttttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 38700 336 - 137434 cttacgttc-cccactgaattatctacatg-ccttataaacatttaatttactgcataggtggaggtctaattttgaacccttctttatccttattatttgtgtgttatgatgctttgatactgcagctttcttagatgtctgaaaattggctc---tatttttttctcaaaattctaggtcctatgaattttccaaacaaa-ttttggaaacagcttgtgaatttctctcaaaatgtttgccacaatttactacagagttgtagtaaatagatatagaattcattgtagtcaataaattacaaac--tacagattgcattgatgctttttttttttttttttt i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90486714 328 - 115148730 CTTACTTTC-CCCACTGAACTATCTACATGCCCTTGTAAACATTTAATTTACTGCATAGGTGGAGATCTAATTTTGAACCCTTCTTTATCCTTATTATGTTTGTGTTATGATGTTTTGGTACTGCAGCTTTCTTAGATGCCTGAAAATTGGCTCTT-TTTTTTTTTCTCAAAattctaggtcctatgaatttcc----caaa-ttttggaaacagcttgtgaatttttctcaaaaTGTTTGCCACAATTTACTACCGAGTTGTAGTAAACAGATATAGAATTCATTGTAGTCAGTAAATTACAAAC--TATAGATTGCATTGATAC-------ttttttttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131430664 333 + 190429646 tttactttc-cccactgaattatctacttgcccttgtaaacaacgaatttactgcataggtgtaggtctaattttgaacccctctttatcctTATTATTTTTGTGTTATGATGTTTTGATACTGCAGGTTTCTTAGATGTCTGAAAATTGGctcta-tttttttttctcaaaattctaggttctataaattttccaaacaaa-ttttagaaacagcttgtgaatttccctcaaaatatttgctagaatttactatggagttgtagtaaatAAATATATAACTCATTGTAGTCAATAAATTACAAAC--TATAGATTGCATTGATGC------TTTCTTTTTTTT i rheMac8.chr5 C 0 I 33 s macFas5.chr5 130949672 333 + 189454096 tttactttc-cccactgaattatctacttgcccttgtaaacaacgaatttactgcataggtgtaggtctaattttgaacccctctttatccttattatttttgtgttatgatgttttgatactgcaggtttcttagatgtctgaaaattggctcta-tttttttttctcaaaattctaggttctataaattttccaaacaaa-ttttagaaacagcttgtgaatttccctcaaaatatttgctagaatttactatggagttgtagtaaatAAATATATAACTCATTGTAGTCAATAAATTACAAAC--TATAGATTGCATTGATGC------TTTCTTTTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34941432 333 - 40319822 tttactttc-cccactgaattatctacttgcccttgtaaacaacgaatttactgcataggtgtaggtctaattttgaacccctctttatccttattatttttgtgttatgatgttttgatactgcaggtttcttagatgtctgaaaattggctcta-tttttttttctcaaaattctaggttctataaattttccaaacaaa-ttttagaaacagcttgtgaatttccctcaaaatatttgctagaatttactatggagttgtagtaaatAAATATATAACTCATTGTAGTCAATAAATTACAAAC--TATAGATTGCATTGATGC------TTTCTTTTTTTT i macNem1.NW_012010911v1 C 0 I 37 s chlSab2.chr7 79020230 334 + 135778131 cttacttttatccactgaattatctacatgcccttgtaaacaacgaatttactgcacaggtgtaggtctaattttgaa-ccctctttatccttattatttttgtgttatgatgttttgatactgcaggtttcctagatgtctgaaaattggctctattttttttttctcaaaattctaggttctataaattttccaaacaaa-ttttagaaacagcttgtgaatttctttcaaaatatttgctagaatttactatggagttgtagtaaatAAATATATAATTCATTGTAGTCAATAAATTACAAAC--TATAGATTGCATTGATGA------tttttttttttt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6018883 334 + 8656713 cttactttc-cccactgaattatctacatgcccttgtaaacaatgaatttactgcataggtggaggtctaattttgcacccctctttatccttattattttcgtgttatgatgttttgatactgcagctttcttagatgtctgaaaattggctcta-ttttttttcctcaaaattctaggttctataaattttccaaacaagtttttagaaacagcttgtgaatttctctcaaaatgtttgctagaatttactatggagttgtagtaaatAAATATATAATTCATTGTAGTCAATAAGTTAAAAAC--TATAGATTGCATTGAttt------tttttttttttt i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I a score=5001.000000 s hg38.chr9_KI270719v1_random 70144 3 + 176845 ttt s panTro5.chr4 135094924 3 + 194502333 ttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 39036 3 - 137434 ttt i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90487042 3 - 115148730 ttt i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130950005 3 + 189454096 CTT i macFas5.chr5 C 0 I 30 s chlSab2.chr7 79020564 3 + 135778131 ttt i chlSab2.chr7 C 0 I 19 s colAng1.NW_012114544v1 6019217 3 + 8656713 ttt i colAng1.NW_012114544v1 C 0 I 15 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macNem1.NW_012010911v1 34941765 37 - 40319822 I e rheMac8.chr5 131430997 33 + 190429646 I a score=535717.000000 s hg38.chr9_KI270719v1_random 70147 1004 + 176845 gagacagaatctcaccttgtcacccaggttggagtgcagtggcacaatctcggctcactgcaacctcagcctcccagattcaagcaattatcctgcctcagcctcctgagtagctgggactacaggcccgtgccaccatgcctggctaatttttttgta-tttttttttagtagagacagggttttatcatgttagccagtatagtcttgatgtcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagcaaccgcgcccagcccctactgcattgattctaaagattaacttccagagaattcacatcaaacaatgttgcatcttcaaatctatgaatatggtagttctttacatttatttaggtcttctgtaatgtttctctacaagaaattttaaaaagttttagtgtgaaagatttttaaaggtttcacttaaattattcttaactatttttataccattaaaattttacttttaaatgtattctcaattgtttatttctagtatttagaaattccattaattttacatattgtattttatgtattgaccttgcattctacacattctgcaccattattgaatttgattcttattattcacagctttttaaataaatgtattaggattttcttcatacacaatatacatacataagttctgtgaataaaaatattttttcttttcacttttcaatttttatgcttttcatttcttgaccccatgcaaatctgaaatccagaggggcagccaaatcttaaagctccaaaatgatctcctttgactccatgtctcacatcctgatcatgcagatgcaagaggtgggttcccatggtattgggcagctctgcccctgtggctttgcgggatatagcctgccttctggctgcttttgtgggctggtgttgagtgtctgtggctttcccaggcacatggtgttgttggtggatctaacattctgaggtctggaggatggtggc s panTro5.chr4 135094927 1005 + 194502333 tagacagaatctcaccttgtcacccaggttggagtgcagtggcacaatcttggctcactgcaacctcagcctcccagattcaagcaattatcctgcctcagcctcctgagtagctgggactacaggcccgtgccaccatgcctggctaatttttttgtattttttttttagtagaggcagggttttatcgtgttagccagtatagtcttgatctcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagcaaccgcacccagcccctactgcattgattttaaagattaacttccagagaattcacatcaaacaatgttgcatcttcaaatctatgaacatggtagatctttacatttatttaggtcttctgtaatgtttttctacaagaaattttaaaaagttttagtgtgaaagatttttaaatgtttcacttaaattattcttaactatttttataccactaaaattttacttttaaatgtattctcaattgtttatttctagtatttagaaattccattagttttacatattgtattttgtgtattgacctttcattctacacattctgcaccattattgaatttgattcttattattcacagctttttaaataaatatattaggattttcttcatacacaatatacatatatatgttctgtgaataaaaatattttttcttttcacttttcaatttttacgcttttcatttcttgacgccatgcaagtcagaaatccagaggggcagccaaatcttaaagctccaaaatgatctcctttgactccatgtctcacatcctgatcatgctgatgcaagaggtgggttcccatggtattgggcagctctgcccctgtggctttgcgggatatagcctgccttctggctgcttttgtgggctggtgttgagtgtctgtggctttcccaggcacatggtgctgttggtggatctaacattctgaggtctggaggatggtggc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 39039 1004 - 137434 gagacagaatctcaccttgtcacccaggttggagtgcagtggcacaatctcggctcactgcaacctcagcctcccagattcaagcaattatcctgcctcagcctcctgagtagctgggactacaggcccgtgccaccatgcctggctaatttttttgtattttttttttagtagagaca-ggttttatcgtgttagccagtatagtcttgatttcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagcaaccgtgcccagcccctactgcattgattctaaagattaacttccagagaattcacatcaaacaatgttgcatcttcaaatctatgaacatggtagatctttacatttatttaagtcttctgtaatgtttctctacaagaaattttaaaaagttttagtgtgaaagatttttaaaggtttcacttaaattattcttaactatttttataccattaaaattttacttttaaatgtattctcaattgtttatttctagtgtttagaaattccattaattttccatgttgtattttgtgtattgaccttgcattctacacattctgcaccattattgaatttgattcttattattcacagctttttaaataaatatattaggattttcttcatatacaatatacatatatatgttctgtgaataaaaatattttttcttttcacttttcaatttttatgcttttcatttcttgaccccatgcaagtccgaaatccagaggggcagccaaatcttaaagctccaaaatgatctcctttgactccatgtctcacatcctgatcatgcagatgcaagaggtgggttcccatgatattgggcagctctgcccctgtggctttgcgggatatagcctgccttctggctgcttttgtgggctggtgttgagtgtctgtggctttcccaggcacatggtggtgttggtggatctaacattctgaggtctggaggatggtggc i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90487045 1004 - 115148730 gagacgaaatctcaccttgtcacccaggctggagtgcagtggcacaatctcagctcactgcaacctcagcctcccagattcaagcaattatcctgcctcagcctcccgagtagctgggactacaggcccatgccaccatgcctggctaattttcttgtattttttttttagtagagacagggtttcatcatgttagccaggatagtcttgatctcctgaccttgtgatccacccaccttggcctcccaaagtgttgggattataggcatgagcaactgagcccagccCCTactgcattgattctaaagattaacttccagagaattcacatcaaacaatgttgcatcttcaaatctatgaacatggtagatctttacatttatttaggtcttctgtaatgtttttctacaagaaatttttaaaatttttagtgtgaaagatttttaaaggtttcagttaaattattcttaactatttttataccattaaaattgtacttttaaatgtattctcaattgtttatttctagtatttagaaattccattaattttacatattgtattttgtgtattgaccttgcattctacacattcagcaccgttattgaatttgattcatattattcacagctttttaaataaatatattaggattttcttcatacacaatatacatatatatgttctgtgaataaaaatattttttcttttcacttttcagtttttatgcttttcatttcttgaccccatgcaagtccgaaatccagaggggcagccaaatcttaaagctccaaaatgatctcctttgactccatgtctcacatcctgatcatgctgatgtaagagttgggtt-ccatggtattgggcagctctgcccctgtggctttgcaggatatagcctgccttctggctgctttcgtgggctggtgttgagtgtctgtggctttcccaggcacatgttgctgttgatagatctaacattctgaggtctggaggacggtggc i nomLeu3.chr7b C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I e colAng1.NW_012114544v1 6019220 15 + 8656713 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e chlSab2.chr7 79020567 19 + 135778131 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I e macNem1.NW_012010911v1 34941765 37 - 40319822 I e macFas5.chr5 130950008 30 + 189454096 I e rheMac8.chr5 131430997 33 + 190429646 I a score=109737.000000 s hg38.chr9_KI270719v1_random 71151 35 + 176845 cctcttcccacaggtccaccaggcggtgccccagt s panTro5.chr4 135095932 35 + 194502333 cctcttcccacaggtccaccaggcggtgccccagt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 40043 35 - 137434 cctcttcccacaggtccaccaggcgttgccccagt i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90488049 35 - 115148730 ccttttctcacaggtccaccagacggtgccccagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131431030 35 + 190429646 ccttttcccacaggtccaccaggcggcgccccagc i rheMac8.chr5 I 33 C 0 s macFas5.chr5 130950038 35 + 189454096 ccttttcccacaggtccaccaggcggcgccccagc i macFas5.chr5 I 30 C 0 s macNem1.NW_012010911v1 34941802 35 - 40319822 ccttttcccacaggtccaccaggcggcgccccagc i macNem1.NW_012010911v1 I 37 C 0 s chlSab2.chr7 79020586 35 + 135778131 ccttttcccacaggtccaccaggcggtgccccagc i chlSab2.chr7 I 19 C 0 s colAng1.NW_012114544v1 6019235 35 + 8656713 ccttttctcacaggtccaccaggcagtgccccagt i colAng1.NW_012114544v1 I 15 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I e manLeu1.NW_012103277v1 2790754 13 - 3013352 I e cerAty1.NW_012000798v1 4493444 13 - 9219162 I a score=2734417.000000 s hg38.chr9_KI270719v1_random 71186 574 + 176845 agggactctgtgtgggggc-tcccacccaacatttcccttcctcactgccctagcagaggttgtcaatgagggccccatccctgcagcaaacttttgcatgggcatccaggtgtttccatatatcttctgaaatctaagcagatgttcccaaacctcaattcttgatttctgtgcatccacaggctcaacaccacatggaagctgccaaggcttggggcttccaccctatgaagcaacagctcaagctgtactttggtcccttttagtcacagctggagtggctgggatgcagggcaccaacaccctacactgcacacagcatggggaccctgggcccagcaaaaccattttcctctaggcctctgagactgtgatgggaagggctgctgtgaagacttctaacatg-ccaggagacattttcaccattgtcttggggattgacattcagttccttgttacttatgcaaatttctgcagccagcttaaatttctcctcagaaaatgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttttatgctctgcttgccttataaa s panTro5.chr4 135095967 576 + 194502333 agggactctgtgtgggggcttcccacccaacatttcccttcctcactgccctagcagaggttgtcaatgagggccccatccctgcagcaaacttttgcatgggcatccaggtgtttcaatatatcttctgaaatctaagcagatgttcccaaacctcaattcttgatttctgtgcacccacaggctcaacaccacgtggaagctgataaggcttggggcttccaccctctgaagcaacagctcaagctgaactttggtcccttttagtcacagctggagtgactgggatgcagggcaccaacaccctacactgcacacagcatggggaccctgggcccagtgaaaccattttcttctaggcctctgagactgtgatgggaagggctgctgtgaagaattctgacatgcccaggagacattttcaccattgtcttggggattgacattcggttcctcgttacttatgcaaatttctgcagccagcttaaatttctcctcagaaaatgggtttttctcttctatcacatcgtcaggctgcaaattttctgaacttttatgctctgcttgccttataaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 40078 557 - 137434 agggactctgtgtggggtc-tcccacccaacatttcccttccacactgccctagcagaggttgtcaatgagggtcccatccctgcagcaaacttttgcatgggcatccaggtgtttccatatatcttctgaaatctaagcagatgttcccaaacctcaattcttgatttctgtgcatccacaggctcaacaccacatggaagctgccaaggcttggggcttccaccctatgaagcaacagctcaagctgtactttggtcccttttagtcacagctggagtggctgggatgcagggcaccaacaccctacactgcacacagcatggggaccctgggcccagcaaaaccattttattctaggcctctgagactgtgatgggaagggctgctgtgaagacttctgacatgcccaggagacattttcaccattgtcttggggattgacattcagttcctcgttacttatgca------------------aaatttctcctcagaaaacgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttttatgctctgcttgccttataaa i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90488084 575 - 115148730 agggactctgtgtgggagc-tcccacccaacatttcccttcctcactgccctagcagaggttgtcaatgagggccccatccctgcagcaaacttttgcatgggcatccaggtatttccatatatcttctgaaatctaagcagatgttcccaaacctcaattcttgacttctgtgcacccacaggctcaacaccacgtggaagctgccaaggcttggggcttccaccctctgaagcaacagcccaagctgtactttggtcccttttagtcacagctggaatggctgggatgcagggcaccaagactctacactgcacacagcatggggaccctgggcccagcgaaaccattttcttctaggcctctgagactgtgatgggaagggctgctgtgaagacctctgacatgcccaggagacattttcaccattgtcttgggaattgacattcagctcctcgttacttatgcaaatttctgcagccagcttaaatttctcctcagaaaatgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttttatgctctgcttgccttataaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131431065 575 + 190429646 agggactctgtgtgggtgt-tcccactacacatttcccttcctcactgctgtagcagaggttgtccatgagggccccatctttgcagcaaacttttgcatgggcatccaggtgtttccatatatcttctgaaatctaggcagatgttcccaaacatcaattctttacttctgtgaacccacaggctcaacaccacatggaagctgccaaggcttggggcttccaccctctgaagcaacagcctaagctgtactttggtcccttttagtcacagctggagtagctgggatgcagtgcaccaagaccctagactgcacacagcacagggaccctgggcccagtgaaaccattttcttctaggcctctgggacggtgacgggaagggctgctgtcaagacctctgacatgcccaggagacattttcaccattgtcttggggattgacattcagctcctcattacttatgcaaatttctgcagcaagcttaaatttctcctcagaaaatgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttttgtgctctgcttcccttataaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130950073 575 + 189454096 agggactctgtgtgggtgt-tcccactacacatttcccttcctcactgctgtagcagaggttgtccatgagggccccatctttgcagcaaacttttgcatgggcatccaggtgtttccatatatcttctgaaatctaggcagatgttcccaaacatcaattctttacttctgtgaacccacaggctcaacaccacatggaagctgccaaggcttggggcttccaccctctgaagcaacagcctaagctgtactttggtcccttttagtcacagctggagtagctgggatgcagtgcaccaagaccctagactgcacacagcacagggaccctgggcccagtgaaaccattttcttctaggcctctgggacggtgatgggaagggctgctgtcaagacctctgacatgcccaggagacattttcaccattgtcttggggattgacattcagctcctcattacttatgcaaatttctgcagcaagcttaaatttctcctcagaaaatgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttttgtgctctgcttcccttataaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34941837 575 - 40319822 agggactctgtgtgggtgt-tcccactacacatttcccttcctcactgctgtagcagaggttgtccatgagggccccatctttgcagcaaacttttgcatgggcatccaggtgtttccatatatcttctgaaatctaggcagatgttcccaaacatcaattctttacttctgtgaacccacaggctcaacaccacatggaagctgccaaggcttggggcttccaccctctgaagcaacagcctaagctgtactttggtcccttttagtcacagctggagtagctgggatgcagtgcaccaagaccctagactgcacacagcacagggaccctgggcccagtgaaaccattttcttctaggcctctgggacggtgatgggaagggctgctgtcaagacctctgacatgcccaggagacattttcaccattgtcttggggattgacattcagctcctcattacttatgcaaatttctgcagcaagcttaaatttctcctcagaaaatgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttttgtgctctgcttcccttatgaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4493457 575 - 9219162 agggactctgtgtgggtgt-tcccactacacatttcccttcctcactgctgtagcagaggttgtccatgagggccccatctttgcagcaaacttctgcatgggcatccaggtgtttccatatatcttctgaaatctaggcagatgttcccaaacctcaattcttgacttctgtgaacccacaggctcaacaccacatggaagctgccaaggcttggggcttccaccctctgaagcaacagcctaagctgtactttggtcccttttagtcacagctggagtagctgggatgcagtgcaccaagaccctagactgcacacagcacagggaccctgggcccagtgaaaccattttcttctaggcctctgggacggtgatgggaagggctgctgtgaagacctctgacatgcccaggagacattttcaccattgtcttggggattgacattcagctcctcattacttatgcaaatttctgcagcaagcttaaatttctcctcagaaaatgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttctgtgctctgcttcccttataaa i cerAty1.NW_012000798v1 I 13 C 0 s chlSab2.chr7 79020621 575 + 135778131 agggactctgtgtgggtgt-tcccactacacatttcccttcctcactgacgtagcagaggttgtccatgagggccccatccttgcagcaaaattttgcatgggcatccaggtgtttccatatatcttctgaaatctaggcagatgttcccaaacctctattcttgacttctgtgaacccacagactcaacatcacatggaagctgccaaggcttggggcttccaccctctgaagcaacagcctaagctgtactttagtcccttttagtcacagctggagtagctgggatgcagtgcaccaagaccctagactgcacacggcaaagggaccctgggcccagtgaaaccattttcttctaggcctctgggaccatgatggaaagggctgctgtgaagacctctgacatgcccaagagacattttcaccattgtcttggggattggcgttcagttcctcattacttatgcaaatttctgcagcaagcttaaatttctcctcagaaaatgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttttgtgctctgtttcccttataaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2790767 575 - 3013352 agggactctgtgtgggtgt-tcccactacacatttcccttcctcactgctgtagcagaggttgtccatgagggccccatctttgcagcaaacttttgcatgggcatccaggtgtttccatatatcttctgaaatctaggcagatgttcccaaacctcaattcttgacttctgtgaacccacaggctcaacaccacatggaagctgccaaggcttggggcttccaccctctgaagcaacagcctaagctgtactttggtcccttttagtcacagctggagtagctgggatgcagtgcaccaagaccctagactgcacacagcacagggaccctgggcccagtgaaaccattttcttctaggcctccgggagggtgatgggaagggctgctgtgaagacctctgacatgcccaggagacattttcactattgtcttggggattgacattcagctcctcatgacttatacaaatttctgcagcaagcttaaatttctcctcagaaaatgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttttgtgctctgcttcccttataaa i manLeu1.NW_012103277v1 I 13 C 0 s colAng1.NW_012114544v1 6019270 574 + 8656713 agggactctgtgtgggtgt-tcccatcacacacttcccttcctcactgccgtagcagaggttgtccatgagggccccatccttgcagcaaacttttgcatgggcatccaggtgtttccatatatcttctgaaatctgggcagatgttcccaaacctcaattcttgacttctgtgaacccacaggctcaacacaacgtggaagctgccaaggcttggggcttccaccttctgaagcaacagcctaagctatactttggtcccttttagtcacagctggagtagctgggatgcagggccccaagaccctagactgcacacagcacagggaccctgggcccagtgaaaccatcttcttctaggtctctgggactgtgatggg-agggctgctgtgaagacctctgacatgtccaggagacattttcaccattgtcttggggattgacattcagctcctcattacttatgcaaatttctgcagcaagcttaaatttctcctcagaaaatgggtttttctcttctatcacattgtcaggctgcaaattttctgaacttttgtgctctgcttcccttataaa i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e cebCap1.NW_016107420v1 4089970 4707 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129463646 4479 - 190850796 I a score=1011851.000000 s hg38.chr9_KI270719v1_random 71760 169 + 176845 ctgaatgcctttaaaagcacccaagtcacttcttcaatgctttgctgtttagaaatttcttctgtcagataccctaa-ttca--tctgtcaagttctaagtttcactaatctttagggcatgggcaaaatgctgtcagtctctttgctaaaacataacaagagtcaactttg s panTro5.chr4 135096543 169 + 194502333 ctgaatgcctttaaaagcacccaagtcacttcttcaatgctttgctgtttagaaatttcttctgtcagataccctaa-ttca--tctctcaagttctaaatttcacaaatctttagggcacgggcaaaacgctgccagtctctttgctaaaacataacaagagtcaactttg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 40635 169 - 137434 ctgaatgcctttaaaagcacccaagtcacttcttcaatgctttgctgtttagaaatttcttctgtcagataccctaa-ttca--tctgtcaagttctaagtttcactaatctttagggcacgggcaaaatgctgccagtctctttgttaaaacataacaagagtcaactttg i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90488659 170 - 115148730 ctgaatgcctttaaaagcacccaagtcacttcttcaattctttgctgtttagaaatttcttctgtcagataccctaatttca--tctctcaagttctaagtttcacaaatctttagggcacgggcaaaatgctgccagtctctttgctaaaacataacaagagtcaactttg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131431640 167 + 190429646 ctgaatgcctttaaaagcacccaagtcacttattcagtgctttgctgttaagaaatttattctgtcagacacactaa-tt----tctctgaagttctcagtttcacaaatctttaggagatggggaacatgctgctagtctctttgctaaaacataacaagagtcaactttg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130950648 167 + 189454096 ctgaatgcctttaaaagcacccaagtcacttattcagtgctttgctgttaagaaatttattctgtcagacacactaa-tt----tctctgaagttctcagtttcacaaatctttaggagatggggaacatgctgctagtctctttgctaaaacataacaagagtcaactttg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34942412 167 - 40319822 ctgaatgcctttaaaagcacccaagtcacttattcagtgctttgctgttaagaaatttgttctgtcagacacactaa-tc----tctctgaagttctcagtttcacaaatctttaggagatggggaacatgctgctagtctctttgctaaaacataacaagagtcaactttg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4494032 167 - 9219162 ctgaatgcctttaaaagcacccaagtcacttcttcagtgctttgctgttaagaaatttattctgtcagacacactaa-tc----tctctgaagttctcagtttcacaaatctttaggagatggggagcatgctgctagtctctttgctaaaacataacaagagtcaactttg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79021196 167 + 135778131 ctgaatgcctttaaaagcacccaagtcacttcttcagtgctttgctgttaagaaatttattctgtcagacacactaa-tc----tctctgaagttctcagtttcacaaatctttaggggatggggaacatgctgccagtctctttgctaaaacataacaagagtcaactttg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2791342 165 - 3013352 ctgaatgcctttaaaagcacccaagtcacttcttcagtgctttgctgttaagaaatttat--tgtcagacacactaa-tc----tctctgaagttctcagtttcacaaatctttaggagatggggaacatgctgctagtctctttgctaaaatataacaagagtcaactttg i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6019844 167 + 8656713 ctgaatgcctttaaaagcacccaagtcacttcttcagtgctttgctattaagaaatttattctgtcagacacactaa-tc----tctctgaagttctaagtttcacaaatctttaggggatggggaacatgctgccagtctctttgctaaaacataacaagagtcaactttg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129468125 170 - 190850796 ctgaatgcctttaaaagcacccaagtcacctcttcaatgctttgctgtttagaaatttcttctgccaggtacctgaa-ttcatctctctcaagttcaaagtttcacaaatctctagggcaggagcaaaatgccaccagtctctttgctaaaatataacaa-agtcaccttag i calJac3.chr3 I 4479 I 50 s cebCap1.NW_016107420v1 4094677 171 - 6311556 ctgaatgcctttaaaagcacccaagtcacctcttcaatgctttgctgtttagaaatttcttctgccagatacctgaa-ttcatctctctcaagttcaaagtttcacaaatctctagggcacgagcaaaatgccaccagtctctttgctaaaatgtaacaagagtcaccttag i cebCap1.NW_016107420v1 I 4707 I 49 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14946534 4665 + 15034901 I e saiBol1.JH378129 6535336 3435 - 25294431 I a score=5575753.000000 s hg38.chr9_KI270719v1_random 71929 778 + 176845 ctctagtttctaacaagttcctcaactccatctgagaccacatcagcctggatctcattgttcacatcattatcagcgttttggtcaaagccat-tcaaaacgtctctaggaagttccaaactttcctgcattttcctgtcttctgctgagcccttcaaactgttccaacccccgcctgttacgc-agttccaaaattgcttctgcattttcaggtatcttttcagcagc---------atcccactctactgataccagtttac-tgta-ttagtctgttttaatgctgctgataaagacatacccaagactgggcaattgac----aaaag---aaaaaaggtttaattggacttacagtttcatgtagctggggaagcctcacaatcatggtggaaagcaaagaggagcaagtcataacttacatggatggcagcaggcaaagagagcttgtgcaggaaaactcccccttataataaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctacctccatgattcaattacctcccaccaggttcctcc-----caaaaggtatgggaattcaagatgagatttgggtggggacacagccaaaccacatcaATGAAGCTCTCTGTTGTATATGTTAATGCTGATAATGTTTTTTTGTTTTGTTTTTG---------AGGAGATCTTAGAGACGAAAAAGGGGAAGCTCCATTAAAATTGGTAAAGGAAGAAACATAATATGAAA------GGAGGGAAAT---AATGAGGTAAAAGATGCAGAGACTGCTTTCCAGAC s panTro5.chr4 135096712 787 + 194502333 ctctagtttctaacaagttcctcaaatctatctgagaccacatcagcctggatctcattgttcacatcattatcagcgttttggtcaaagccat-tcaaaacgtctctaggaagttccaaactttcctgcattttcctgtcttctgctgagcccttcaaactgttccaacccctgcctgttaccc-agttccaaaattccttctgcattttcaggtatcttttcagcagc---------atcccactctactgatacccgtttac-tgta-ttagtctgttttaatgctgctgataaagacatacccaagactgggcaattgac----aaaag---aaaaaaggtttaattggacttacagtttcatgtagctggggaagcctcacaatcatggtggaaggcaaagaggagcaagtcgcatcttacatggatggcagcaggcaaagagagcttgtgcaggaaaactcccccttataataaccatcagacctcatgagacttattcactatcaggaaaacagcacaggaaaagcctacctccatgattcaattacctcccaccaggttcctcc-----cacaatgtatgggaattcaagatgagatttgggtggggacacagccaaaccacatcaATGAAGCTCTCTGTTGTATTTGTTAACGCTGATAATGTTTTTTTGTTTTGTTTTTGAGATAGAGAAGGAGATCTTAGAGACGAAAAAGGGGAAGCTGCATTAAAATTGGTAAAGGAAGAAACATAATATGAAA------GGAGGGAAAT---AATGAGGTAAAAGATGCAGAGACTGCTTTCCAGAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 40804 787 - 137434 ctctagtttctaacaggttcctcaactccatctgagaccacatcagcctggatctcattgttcacatcattatcagcgttttggtcaaagccat-tcaaaatgtctctaggaagttccaaactttcctgcattttcctgtcttctgctgagcccttcaaactgttccaactcctgcctgttacgc-agttccaaaattgcttccgcattttcaggtatcttttcagcagc---------atcccactctactgataccactttac-tgta-ttagtctgttttaatgctgctgataaagacatacccaagactgggcaattgac----aaaag---aaaaaaggtttaattggacttacagtttcatgtagctggggaagcctcacaatcatggtggaaggcaaagaggagcaagtcatatcttacatggatggcagcaggcaaagagagcttgtgcgggaaaactcccccttataataaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctacctccatgattcaattacctcccaccaggttcctcc-----cacaacgtatgggaattcaagatgagatttgggtggggacacagccaaaccacatcaATGAAGCTCTCTGTTGTATATGTTAATGCTGATAATGTTTTTTTGTTTTGTTTTTGAGATAGAGAAGGAGATCTTAGAGATGAAAATGGGGAAGCTCCATTAAAATTGGTAAAGGAAGAAACATAATATGAAA------GGAGGGAAAT---AATGAGGTAAAAGATGCAGAGACTGCTTTCCAGAC i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90488829 788 - 115148730 ctctagtttctaacaagttcctcaactccatctgagaccacatcagcctggatctcattgttcacatcattatctgcgtttcggtcaaagccataacaaaacgtctctaggaagttccaaactttcctgcattttcctgtcttctgctgagcccttcaaactgttccaacccctgcctgttaccc-agttccaaaattgcttccacattttcaggtatcttttcagcatc---------atcccaccctactgaaaccagtttac-tgta-ttagtctgttttaatgctgctgataaagacatacccaagactgggcaattgac----acaag---aaaaaaggtttaattggacttacactttcatgtagctggggaagcctcacaatcatggtggaaggcaaagaggagcaagtcacatcttacatggatggcagcaggcaaagagagcttgtgcaggaaaactcccccttataataaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctacctccatgattcaattacctcccaccaggttcctcc-----cacaatgtatgggaattcaagatgagatttgggtggggacacagccaagccacatcaATGAAGCTCTCTGTTGTATTTGTTAATGCTGATAATGCTTTTTTGTTTTGTTTTTGAGATAGAGAAGGAGATCTTAGAGACGAAAAAGGGGAAGCTGCATTAAAATTGGTAAAGGAAGAAACATAATATGAAA------GGAGGGAAAT---AATGAGGTAAAAGATGCAGAGACTGCTTTCTAGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131431807 791 + 190429646 ctgtagtttcaaacaagtccctcaactccatctgagaccacatcagcctggatctcatcgtccacatcattatcagcattttggtcaaagccat-tcaaaacatttctaggaatttccaaactttcctacattctcctgtcttcttctgagcccttcaaactgttccaacctctgcctgttaccc-agttccaatgttgcttccacattttcaggtatctttacagcagc---------atcccactctactgataccaatttac-tgtatttagtctgttttaatgctgctcataaagatacacccaagactgggcaattgac----aaaag--aaaaaaagttttaattggacttacagtttcatctatctggggaatcctcacaatcatagtggaaggcaaagaggagtaagtcacatcttacatgaatggcagcaggcaaagagagcttatgcaggaaaactcccccttatgataaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctaccgccatgattcaattacctcccaccaggttcctcc-----cacaacatatgggaatccaagatgagatttaggtggggacacagccaaaccatatcaATGAAGATCTCTGTTGTATTTGTTGTTGCTGATAATGCTTGTTTGTTTTGCTTTTGAGATAGTGGAGAATATCTTACAGAC-AAAAAGGGGAAGCTGCATTAAAATTAGTAAAGGAAGAAACATAATATGAAA------GGAGGGAAATAACAATGAGATAAAAGATTCAGAGACTGCTTTCCAGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130950815 788 + 189454096 ctgtagtttcaaacaagtccctcaactccatctgagaccacatcagcctggatctcattgtccacatcattatcagcattttggtcaaagccat-tcaaaacatctctaggaatttccaaactttcctacattctcctgtcttcttctgagcccttcaaactgttccaacctctgcctgttaccc-agttccaatgttgcttccacattttcaggtatctttacagcagc---------atcccactctactgataccaatttac-tgtatttagtctgttttaatgctgctcataaagatacacccaagactgggcaattgac----aaaag--aaaaaaagttttaattggacttacagtttcatctatctggggaatcctcacaatcatagtggaaggcaaagaggagtaagtcacatcttacatgaatggcagcaggcaaagagagcttatgcaggaaaactcccccttatgataaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctaccgccatgattcaattacctcccaccaggttcctcc-----cacaacatatgggaatccaagatgagatttaggtggggacacagccaaaccatatcaATGAAGATCTCTGTTGTATTTGTTGTTGCTGATAATGCTTGTTTGTTTTGCTTTTGAGATAGTGGAG---ATCTTACAGAC-AAAAAGGGGAAGCTGCATTAAAATTAGTAAAGGAAGAAACATAATATGAAA------GGAGGGAAATAACAATGAGATAAAAGATTCAGAGACTGCTTTCCAGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34942579 788 - 40319822 ctgttgtttcaaacaagtccctcaactccatctgagaccacatcagcctggatctcattgtccacatcattatcagcattttggtcaaagccat-tcaaaacatctctaggaatttccaaactttcctacattctcctctcttcttctgaacccttcaaactgttccaacctctgcctgttaccc-agttccaatgttgcttccacattttcaggtatctttacagcagc---------atcccactctactgataccaatttac-tgtatttagtctgttttaatgctgctcataaagatacacccaagactgggcaattgac----aaaag--aaaaaaagttttaattggacttacagtttcatctatctggggaatcctcacaatcatagtggaaggcaaagaggagtaagtcacatcttacatgaatggcagcaggcaaagagagcttatgcaggaaaactcccccttatgataaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctaccgccatgattcaattacctcccaccaggttcctcc-----cacaacatatgggaatccaagatgagatttaggtggggacacagccaaaccatatcaATGAAGATCTCTGTTGTATTTGTTGTTGCTGATAATGCTTGTTTGTTTTGCTTTTGAGATAGTGGAG---ATCTTACAGAC-AAAAAGGGGAAGCTGCATTAAAATTAGTAAAGGAAGAAACATAATATGAAA------GGAGGGAAATAACAATGAGATAAAAGATTCAGAGACTGCTTTCCAGAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4494199 790 - 9219162 ctgtagtttcaaacaagtccctcaactccatctgagaccacatcagcctggatctcattgtccacgtcattatcagcattttggtcaaagccat-tcaaaacatctctaggaatttccaaactttcctacattctcctgtcttcttctgagcccttcaaactgttccaacctctgcctgttatcc-agttccaaagttgcttccacattttcaggtatctttacagcagc---------atcccactctactgataccaatttac-tgtatttagtctgttttaatgctgctcataaagatacacccaagactgggcaattgac----aaaag---aaaaaagttttaattggacttacagtttcatctatctggggaatcctcacaattatagtggaaggcaaagaggagtaagtcacatcttacatgaatggcagcaggcaaagagagcttatgcaggaaaactcccccttatgataaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctacccccatgattcaattacctcccaccaggttcctcc-----cacaacatatgggaatccaagatgagatttaggtgggcacacagcaaaaccatatcaATGAAGATCTCTGTTGTATTTGTTGTTGCTGATAATGCTTGTTTGTTTTGCTTTTGAGATAGTGAAGAAGATCTTACAGAC-AAAAAGGGGAAGCTGCATTAAAATTGGTAAAGGAAGAAACATAATATGAAA------GGAGGGAAATAACAATGAGATAAAAGATTCAGAGACTGCTTTCCAGAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79021363 793 + 135778131 ctgtagtttcaaacaagtccctcaactccatctgagaccacatcagcctggatctcattgtccacatcattatcagcattttggtcaaagccat-tcaaaacgtctctaggaatttccaaactttcctacattctcctgtcttctactgagcccttcaaactgttccaacctccgtctgttaccc-agttccaaagttgcttccacattttcaggtatctttacagcagc---------atcccactctactgataccaatttac-TGAATttagtctgttttaatgctgcccataaagacacacccaagactgggcaattgac----aaaagaaaaaaaaagttttaattggacttacagtttcatctatctggggaagcctcacaatcatagtggaaggcaaagaggagtaaatcacatctttcatgaatggcagcaggcaaagagagcttatgcaggaaaactcccccttatgttaaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctacccccatgattcaattacctcccaccagtttcctcc-----cacaacatatgggaatccaagatgagatttaggtggggacacagccaaaccatatcaATGAAGATCTCTGTTGTATTTGTAGTTGCTGATAATGCTTGTTTGTTTTGCTTTTGAGATAGTGAAGAAGATCTTACAGAC-AAAAAGGGGAAACTGCATTAAAATTGGTAAAGGAAGAAATATAATATGAAA------GGAGGGAAATAACAATGAGATAAAAGATTCAGAGATTGCTTTCCAGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2791507 790 - 3013352 ctgtagtttcaaacaagtccctcaactccatctgagcccacatcagcctggatctcattgtccacgtcattatcagcattttggtcaaagccat-tcaaaacatctctaggaatttccaaactctcctacattctcctgtcttcttctgagcccttcaaactgttccaacctctgcctgttatcc-agttccaaagttgcttccacattttcaggtatctttacagcagc---------atcccactctactgataccaatttac-tgtatttagtctgttttaatgctgctcataaaggtacacccaagactgggcaattgac----aaaag---aaaaaagttttaattggacttacagtttcatctatctggggaatcctcacaatcatagtggaaggcaaagaggagtaagtcacatcttacatgaatggcagcaggcaaagagagcttatgcaggaaaactcccccttatgataaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctacccccatgattcaattacctcccaccaggttcctcc-----cacaacatatgggaatccaagatgagatttaggtggggacacagccaaaccatatcaATGAAGATCTCTGTTGTATTTGTTGTTGCTGATAATGCTTGTTTGTTTTGCTTTTGAGCTAGTGAAGAAGATCTTACAGAC-AAAAAGGGGAAGCTGCATTAAAATTGGTAAAGGAAGAAACATAATATGAAA------GGAGGGAAATAACAACGAGATAAAAGATTCAGAGACTGCTTTCCAGAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6020011 787 + 8656713 ctgtagtttcaaacaaatccctcaactccatctgagaccacatcagcctggatctcattgtccacatcattatcagcattttggtcaaagtcat-tcaaaacgtctctaggaatttccaaactttcctacattttcctgtcttcttctgagcccttcaagctgttccaatctctgcctgttaccc-agttccaaagttgctcccacattttcaggtatctttacagcag------------ctcactctactgatatcagtttac-tgtatttagtctgttttaatgctcctcataaagacacacccaagactgggcaattgac----aaaag--aaaaaaagttttaattggacttacagtttcacgtatctggggaagcctcataattatggtggaaggcaaagaggagtaagtcacatcttacatgaatggcagcaggcaaagagagcttatgcaggaaaactcccccttatgataaccatcagacctcatgagacttactcactatcaggaaaacagcacaggaaaagcctacccccatgattcaactccctcccaccagattcctcc-----cacaacatatgggaatccaagatgagatttaggtggggacacagccaaaccatatcaATGAAGCTCTCTGTTGTATTTGTTGTTGCTGATAATGCTTGCTTGTTTTGCTTTTGAGATAGTGAAGAAGATCTTACAGAC-AAAAAGGGGAAGCTGCATTAAAATTGGTAAA-GAAGAAACATAATATGAAA------GGAGGGAAATAACAATGAGATAAAAGATTCAGAGACTGCTTTCCAGAC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129468345 781 - 190850796 ctctagtttccaacaagttcctcatctccatctgagactatatcagcctggatttcattgtccacatctttatcagcattttggtcaaagccat-tcaaaatatctcttggaaattccaaatattcccacattttcctgtcttcttttgagcccttcaaactgttccagcctctgcttgttaccctggttccaaattcacttccacattttcaggcatcttttcagcagtgaaaagatggtaccaatttacT--------------tgta-ttagtctgttttcatgctgctgataaagacgtatccaagactcggcaatttac----aaaaa---aaaaaaggtttcattagacttacagtttcacatagcttggaaatcctcagaatcatggtggaaggcaaagaggagcaagtcacatatta-atggatggcagtagacaaagagagtttgtgcaagaaaactcccccttataataatcatgaaataccatgaaacttactc---------aaaacagcacaggaaagacctacccccatgattccattgcctcccactggg-tcctcc-----cacatcatgtgggaattcaagataagatttgggtggggacacagccaaactatatcaGTGAATGTCTCTATTTTATTTGCTGTTGGTGATAATGATTGTTCATTCTG-TTTTGAGATATAGAGGGAGATCTTAGAGACAAAAAAGGGGAAGTTGCATTAAAATTGGTAAAGGAAGAAACATAACATGAAAGGAGGGGGAGGGGAATCACAATGAGGCAAAAGATGCAGAGACTGCTTTCCAGAC i calJac3.chr3 I 50 C 0 s cebCap1.NW_016107420v1 4094897 795 - 6311556 ctctagtttccaacaagttcctcatccccctctgaggctacatcagcctggatttcattgtccacatcattatcagcattttggtcaaagccat-tcaaaatatctctaggaaattccaaatattctcacattttcctttcttcttttgagcccttcaaactgttccagcctctgcttgttaccccagttccaaattcacttccacattttcaggcatcttttcagaaatgAAAAGACGGTACCAATCTACTGGTACCAATTTAC-tgta-ttagtctgttttcatgctgctgataaagatgtacccaagactgggcaatttacag--aaaaa---aaaaaaggtttcattggacttacagtttcacgtagcttgggaaacctcacaatcacggtggaaggcaaagaggagcaaatcacatctta-atggatggcagcaggcaaagagagcttatgcaagaaaactcccccttatgataacaatgagataccgtgaaacttactc---------aaaacagcacaggaaagacctacccccatgattcaattgcctcccactggg-tcctcccacatcacatcatatgtgaattcaagatgagatttgggtagggacacagccaaaccatatcaGTGAATCTCTCTATTGTATTTGTTGTTGGTGGTAATATTTGTTCACTTTG-TTTTGAGATATAGAAGGAGATCTTGGAGACAAAAAAGGGGAAGTTGCATTAAAATTGGTAAAGGTAGAAACATAATATGAAA------GGAGGGGAATAACAATGAGGCAAAAGATTCAGAGACTGCTTTCCAGAC i cebCap1.NW_016107420v1 I 49 C 0 s aotNan1.NW_018507635v1 14951199 799 + 15034901 ctctagtttccaacaagttcctcatctccatctgagactacatcagcctggatttcattgtccacatcattatcagaattttggtcaaagccat-tcaaaatatctctaggaaattccaaatattcccacatttttctgtcttcttttgagcccttcaaactgttccagcctcttcttgttaccccagttccaaattcatttccacattttcaggcatcttttcagcagcgaaaagatagtaccaatctactggtaccaatttacTtgca-ttagtctgttttcatgctgctgataaagacgtacccaagaatgggcaatttacagaaaaaaa---aaaaaaggtttcattggacttacagtttcacatagtttgggaagcctcataatcatggtggaaggcaaagaggagcaagtcacatctta-atggatggcagcaggcaaagagagcttgtgcaagaaaactcccctttataataaccatgagataccatgaaacttactt---------aaaacagcacaggaaacacctacccccatgattcaattgcctcccaccggg-tcctcc-----cacattatgtgggaattcaagatgagatttgggtggggacacagccaaaccacatcaGTGAATCTCTCTATTGTATTTGTTGTTGGTGATAATGATTGTTCATTTTG-TTTTGAGATATAGAAGGAGATCTTAGAGACAAAAAAGGGGAAGTTGCATTAAAATTGGTAAAGGAAGAAACATAATATGAAAAGAGGGGGAGGGGAATAACAATGAGGCAAAAGATGCAGAGACTGCTTTCCAGAC i aotNan1.NW_018507635v1 I 4665 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44068591 1406 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I a score=334050.000000 s hg38.chr9_KI270719v1_random 72707 43 + 176845 AAAGTAA---GAATGAACTTCACTTTGGAATAACAAAGCAGTGCTT s panTro5.chr4 135097499 43 + 194502333 AAAGTAA---GAATGAACTTCACTTTGGAATAACAAAGCAGTGCTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 41591 43 - 137434 AAAGTAA---GAAGGAACTTCACTTTGGAATAACAAAGCAGTGCTT i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90489617 43 - 115148730 AAAGTAA---GAAAGAACTTCACTTTGGAATAACAAAGCAGTGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131432598 43 + 190429646 AAAGTAC---GAAAGAATTTCACTTTGGAATAGCAAAGCAGTGCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130951603 43 + 189454096 AAAGTAC---GAAAGAATTTCACTTTGGAATAGCAAAGCAGTGCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34943367 43 - 40319822 AAAGTAC---GAAAGAATTTCACTTTGGAATAGCAAAGCAGTGCTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4494989 43 - 9219162 AAAGTAC---GAAAGAATTTCACTTTGGAATAGCAAAGCAGTGCtt i cerAty1.NW_012000798v1 C 0 I 391 s chlSab2.chr7 79022156 43 + 135778131 AAAGTAC---GAAAGAATTTCACTTTGGAATAGCAAAGCAGTGCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2792297 43 - 3013352 AAAATAC---GAAAGAATTTCACTTTGGAATAGCAAAGCAGTGCTT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6020798 43 + 8656713 AAAGTAC---GAAAGAATTTCACTTTGGAATAGCAAAGCAGTGCTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129469126 43 - 190850796 AAAGTAA---GAAAGAGCTTCACTTTGATATAACAAAGCAGTGCTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4095692 43 - 6311556 AAAGTAA---GAAAGAACTTCACTTTGGTATAACAAAGCAGTGCTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14951998 43 + 15034901 AAAGTAA---GAAAGAACTTCACTTTGGTATAACAAAGCCGAGCTT i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44069997 46 - 53741614 AAAATAAAATGAAGAGACAGCATTTGGGCATAATAATATTGTGCTC i canFam3.chr19 I 1406 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I a score=40571.000000 s hg38.chr9_KI270719v1_random 72750 28 + 176845 GCTTGGCAAGGTGAGTCTTAGAATC-TGA s panTro5.chr4 135097542 28 + 194502333 GCTTGGCAAGGTGAGTCTTAGAATC-TGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 41634 28 - 137434 GCTTGGCAAGGTGAGTCTTAGAATC-TGA i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90489660 28 - 115148730 GCTTGGCAAGGTGAGTCTTAGAATC-TGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131432641 10 + 190429646 ---------------TCTAAGGAAT---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130951646 10 + 189454096 ---------------TCTAAGGAAT---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34943410 10 - 40319822 ---------------TCTAAGGAAT---- i macNem1.NW_012010911v1 C 0 C 0 s chlSab2.chr7 79022199 10 + 135778131 ---------------TCTAAGGAAT---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2792340 10 - 3013352 ---------------TCTAAGGAAT---- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6020841 26 + 8656713 GCTTGGCAAGGTGAGTCTTAGAATCT--- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129469169 28 - 190850796 GCTTGGCAAGGTGAGTTTTAGAATG-TGA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4095735 28 - 6311556 GCTTGGCAAGGTGAGTTTTAGAATG-TAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14952041 28 + 15034901 GCTTGGCAAAGTGAGTTTTAGAATG-TGA i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44070043 28 - 53741614 AGTTGGCTAGATGAATCTTGGCATA-TCA i canFam3.chr19 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I e cerAty1.NW_012000798v1 4495032 391 - 9219162 I a score=2377532.000000 s hg38.chr9_KI270719v1_random 72778 311 + 176845 CTAACATCAACAGGGCAGAGTCTCAGGTAATTAACAAAACCAGGAAGGAACAGGGAGCAGCAATGCTAAAACACAAGAAACCAGGTTACTTTGTCCTACTTCATAGTTGTTATTTTCCT----AATCATTGGAGATAAGCTATGATTAACAGAAAAACTACCCATGTAAAATATT----GTCACCCAACTTTTAAGAAaaacaagaaagaagatacaaaa--cttagcaaacagaataagtaat-ttcagagaatcagaattaagacaagaaacaa-ATGTAATTACAGTAAGTGTAATTCATATCTTCAGAAACATGCAAGA s panTro5.chr4 135097570 311 + 194502333 CTAACATCAACAGGGCAGAGTCTCAGGTAATTAACAAAACCAAGAAGGAACAGGGAGCAGCAATGCTAAAACACAAGAACCCAGGTTACTTTGTCCTACTTCATAGTTGTTATTTTCCT----AATCATTGGAGATAAGCTATGATTAACAGAAAAACTACCCATGTAAAATATT----Gtcacccaacttttaagaaaaacaagaaagaagatacaaaa--cttagcaaacagaataagtaat-ttcagagaatcagaattaagacaagaaacaa-atgtaattacagtaagtgtaattcatatcttcagagacatgcaaga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 41662 311 - 137434 CTAACATCAACAGGGTAGAGTCTCAGGTAATTAACAAAACCAGGAAGGAACAGGGAGCAGCAATGCTAAAACACAAGAAACCAGGTTACTTTGTCCTACTTCATAGTTGTTATTTTCCT----GATCATTGGAGATAAGCTATGATTAACAGAAAAACTACCCATGTAAAATATT----GTCACCCAACTTTTAAGAAaaacaagaaagaagatacaaaa--cttagcaaacagaataagtaat-ttcagagaatcagaattaagacaagaaacaa-ATGTAATTACAGTAAGTGTAATTCATATCTTCAGAGACATGCAAGA i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90489688 311 - 115148730 CTAACATCAACAGGGCAGAGTCACAGGTAATTAACAAAACCAGGAAGGAACAGGGAGCAGCAATACTAAAACACAAGAAACCAGGTTACTTTGTCCTACTTCATAGTTGTTATTTTCCT----AATCATTGGAGATAAGCTATGATTAACAGAAAAACTACCCATGTAAAATATT----Gtcaccaaacttttaagaaaaacaagaaagaagatacaaaa--cttagcaaacagaataagtaat-ttcagagaatcagaataaagacaagaaacaa-atgtaattacagtaagtataattcatatcttcagagacatgcaaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131432651 310 + 190429646 CTAACATCAACAGGGCAGAGTCACAGGTAATTAACAAAACCAGGAAGGAACAGGGAGCAGCAATGCGAAAACACAAGAAAGCAGGTTACTTCATCCTACTTCATAGCTGTTATTTTCCT----AAGCATTGGAGATAAGC-ATGATTAACAGAGAAACCACCCATGTAAAATATT----GTCACCAAACTCTTAAGCAAAACAAGAAAGAAGATACAAAA--CTTAGCAAACAGAAGAAGTAAT-TTCAGAGAATCAGAATTAAGACTAGAAACAA-ATGTAATTATAGTAAGTATAATTTTCATCTTCAGAGACATTCAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130951656 310 + 189454096 CTAACATCAACAGGGCAGAGTCACAGGTAATTAACAAAACCAGGAAGGAACAGGGAGCAGCAATGCGAAAACACAAGAAAGCAGGTTACTTCATCCTACTTCATAGCTGTTATTTTCCT----AAGCATTGGAGATAAGC-ATGATTAACAGAGAAACCACCCATGTAAAATATT----Gtcaccaaactcttaagcaaaacaagaaagaagatacaaaa--cttagcaaacagaagaagtaat-ttcagagaatcagaattaagactagaaacaa-atgtaattatagtaagtataattttcatcttcagagacattcaaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34943420 310 - 40319822 CTAACATCAACAGGGCAGAGTCACAGGTAATTAACAAAACCAGGAAGGAACAGGGAGCAGCAATGCGAAAACACAAGAAAGCAGGTTACTTCATCCTACTTCATAGCTGTTATTTTCCT----AAGCATTGGAGATAAGC-ATGATTAACAGAGAAACCACCCATGTAAAATATT----GTCACCAAACTCTTAAGCAAAACAAGAAAGAAGATACAAAA--CTTAGAAAACAGAAGAAGTAAT-TTCAGAGAATCAGAATTAAGACTAGAAACAA-ATGTAATTATAGTAAGTATAATTTTCATCTTCAGAGACATTCAAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4495423 310 - 9219162 CTAACATCAACAGGGCAGAGTCACAGGTAATTAACAAAACCAGGAAGGAACAGGGAGCAGCAATGCGAAAACACAAGAAAGCAGGTTACTTCATCCTACTTCATAGCTGTTATTTTCCT----AATCATTGGAGATAAGC-ATGATTAACAGAGAAACCACCCATGTAAAATATT----Gtcaccaaactcttaagcaaaacaagaaagaagatacaaaa--cttagcaaacagaagaagtaat-ttcagaaaatcagaattaagacaagaaacaa-atgtaattacagtaagtataatttgcatcttcagagacattcaaga i cerAty1.NW_012000798v1 I 391 C 0 s chlSab2.chr7 79022209 310 + 135778131 CTAACATCAACAGGGCAGAGTCACAGGTAATTAACAAAACCAGGAAGGAACAAGGAGCAGCAATGCGAAAACACAAGAAAGCAGGTTACTTCATCCTACTTCATAGCTGTTATTTTTCT----AAGCATTGGAGATAAGC-ATGATTAACAGAGAAACAATCCATGTAAAATATT----Gtcaccaaactcttaagcaaaacaagaaagaagatacaaaa--cttagcaaacagaagaagtaat-ttcagagaatcagaattaagacaagaaacaa-atgtaattacagtaagtataatttgcatcttcagagacattcaaga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2792350 310 - 3013352 CTAACATCAACAGGGCAGAGTCACAGGTAATTAACAAAACCAGGAAGGAACAGGGAGCAGCAATGAGAAAACACAAGAAAGCAGGTTACTTCATCCTACTTCATAGCTGTTATTTTCCT----AAGCATTGGAGATAAGC-ATGATTAACAGAGAAACCACCCATGTAAAATATT----GTCACCAAACTCTTAAGCAAAACAAGAAAGAAGATACAAAA--CTTAGCAAACAGAAGAAGTAAT-TTCAGAGAATCAGAATTAAGACCAGAAACAA-ATGTAATTATAGTAAGTATAATTTTCATTTTCAGAGACATTCAAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6020867 305 + 8656713 --AACATCAACAGGGCAGAGTCACAGGTAATTAACAAAACCAGGAAGGAACAGGGAGCAGCAATGCGAAAACACAAGAAAGCAGGTTACTTCATCCTACTTCATAGCTATTATTTTCCT----AATCATTGGAGATAAGC-ATGATTAACAGATAAACCACCCATGTAAAATATT----GTCACCAAACTCTTAAGCAAAACAAGAAAGAAGATACAAAA--CTTAGCAAAC---AGAAGTAAT-TTCAGAGAATCAGAATGAAGACAAGAAACAA-ATGTAATTACAGTAAGCATAATTTGCATCTTCAGAAACATTCAAGA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129469197 317 - 190850796 CTATCATCAACAAAGCAGAGTCACAGGTAATTAACAAAACCAAGAAGGAACAGGGAGCAACAATGCTAAAACACAGGAAACCAGCATGCTTTGTTCTACTTTATAGTTGTTATTTTCCTTGGAGATCATTGGAGATAAGGTATGATTAACAGAAAATCTACCCTTGTAAAATATT----GTCATCAAAGTTTAAAGAAAAACAAGAAAGAAGATACAAAACACTTAGCAAACAGAATAAGTGAT-TTTAGAGAATCAGAATTAAGACAAGAAATAA-ATCTAATTATAATAAGTGTAACACATATCTTCAGAGAGATGCAAGA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4095763 313 - 6311556 CTAACATCAACAAAGCAGAGTCACAGGTAATTAGCAAAACCAAGAAGGAACAGGGAGCAGCAATGCTAAAACACAGGAAACCATCTTGCTTTGTTCTACTTTATAATTGTTGTTTTCCT----AATCATTGGAGATAAGCTATGATTAACAGAAAATCCACACTTGTAAAATATT----GTCATCAAACTTTAAAGAAAAACAAGAAGGAAGATACAAAACGCTTGGCAAACAGAAGAAGTAAT-TTTAGAGAATCAGAATTAAGACAAGAAATAA-ATCTAATTACAATAAGTGTAACACATATCTTCAGAGAGATGCAAGA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14952069 313 + 15034901 CTAACATCAACAAAGCAGAGTCATAGATAATTAACAAAACCAAGAAGGAACAGGGAGCAGCAATGCTAAAACACAGGAAACCAGCTTGCTTTATTCTACTTTATAGTTGTTATTTTCCT----AATCATTGGAGATAAGCTATGATTAACAGAAAATTCACCCTTGTAAAATATT----GTCATCAAACTTTaaagaaaaacaagaaagaagatacaaaacacttagcaaacagaaGAAGTAAT-TTTAGAGAATCAGAATTAAGACAAGAAATAA-ATCTAATTACAATAAGTGTAACACATATCTTCAGAGAGATGCAGGA i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44070071 284 - 53741614 GTAATATCAATAGGGCAGAGCCCCAG-TAATTGGCAAAGCCAGGAA-GAACAGGAAGCAGGAACACTGATAAACAAGGAT---GATTATTCCCTCCAACTTCATAGATG----GTTCAC----AACTCCT-----CAACCTCTTGTTAACAGATAGAC-ATTCATGTAAAAAGTTAAAAGTCATCACACTTTTAAGAAAGGCAAGAGTGAA---ACAAAA--CTTAGCA--------GAATACTATCCAAAGAATCAGAGTTAATACAGAAAATAACAACTTTTTAAAAGAGGTAT-------ATCTTCAGAGAAATGCAAGA i canFam3.chr19 C 0 I 5271 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I a score=3772178.000000 s hg38.chr9_KI270719v1_random 73089 544 + 176845 AGAGGTTGCAttttagaaaatactgataatagctcttggattaaaaactcaacagatgttctgaagagaacaatagacatagttaaatatagatctagcaagtttgaagtttaaaagttgaataattttctctgaatccaatggctagg---ata----aaatgaagaaaggtaaagggaggtaaagtgaagataaagaattgttgacgtaaagttgtttaaaatgcta-g-aaaaaaaaggaaagtaaacataaagatggaaataattaaagaactaatttaaatatt-ttttagaactagaaatactgtagacttgagatttaaagttttcatagaagtatgaacttatattaatggagaaattctactgatagacatctcttgaagaagcaatggg------atactaacgattaggacagaatcataaagacttccagagtaggaggatagaaaggtaattttcaatggaataagaagtagatagaaaagaaaatttattcttaaacatgtagatgttgttaataactgggacaagaccatcaatgtctgaagaaa s panTro5.chr4 135097881 539 + 194502333 agaggttgcatTTTAGAAAATACTGATAATAGCTCTTGGATTAAAAACTCAACAGATGCTCTGAAGAGAACAATAGACATAGTTAAATATAGATCTAGCAAGTTTGAAGTTTAAAAGTTGAATAATTCTCTCTGAATCCAATGGCTAGG---AAA----AAACGAAGAAAGGTAAAGGGAGGTAAAGTGAAGATAAAGAATTGTTGACATAAAGTTGTTTAAAATACTA-G---AAAAAAGGAAAGTAAACATAAAGACTGAAATAATTAAAGAACTAATTTAAATATT-TTTTAGAACTAGAAATACTGTAGACTTGAGATTTAAAGTTTTCATAGAAGTATCAACTTATATTAATGGAGAAATT---CTGATAGACATCTCTTGAAGAAGCAATGGG------ACACTAATTATTAGGACAGAATCATAAAGACTTCCAGAGTAGGAGGATAGAAAGGTAATTTTCAATGGAAAAAGAAGTAGATAGAAAAGAAAATTTATTCTTAAACAAGTAAATGTTGTTAATAACTGGGACAAGACCATCAATGTCTGAAGAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 41973 542 - 137434 AGAGGTTGCATTTTAGAAAATACTGATAATAGCTCTTGGATTAAAAACTCAACAGATGTTCTGAAGAGAACAATAGACATAGTTAAATATAGATCTAGCAAGTTTGAAGTTTAAAAGTTGAATAATTTTCTCTGAATCCAATGGCTAGG---AAa----aaatgaagaaaggtaaagggaggtaaagtgaagataaagaattgttgacgtaaagttgtttaaaatgcta-g--aaaaaaaggaaagtaaaCATAAACACGGAAAT-ATTAAAGAACTAATTTAAATATT-TTTTAGAACTAGAAATACTGTAGACTTGAGATTTAAAGTTTTCATAGAAGTATGAACTTATATTAATGGAGAAATTCTACTGATAGACATCTCTTGAAGAAGCAATGGG------ATACTAATGATTAGGACAGAATCATAAAGACTTCCAGAGTAGGAGGATAGAAAGGTAATTTTCAATGGAATAAGAAGTAGATAGAAAAGAAAATTTATTCTTAAACATGTAGATGTTGTTAATAACTGGGACAAGACCATCAATGTCTGAAGAAA i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90489999 546 - 115148730 agacgttgcattttagaaaatactaataatagctcttggattaaaaactcaacagatgctctgaagagaacaatagacataggtaaatacagatctagcaagtttgaagtttaaaagttgaataattctctctgaatccaatggataggaaaaaa----aaactaagaaaggtaaagggaagtaaagtgaagataaagaattgttgacataaagttgtttaaaatacta-g--aaaaaaaggaaaataaacataaagatggaaataattaaagaaccaatttaaatatt-ttttagaactagaaatactgtagacttgagatttaaagttttcatagaagtatcaacttatattaatggagaaattctactgatagacatctcttgaagaagcaatggg------atactaatgattagaactgaatcataaagacttccagagtaggaggatagaaaggtaattttcaatgggataagaagtagacagaaaagaaaatttattcttaaacatgtagatcttgttaataactgggacaagaccatcaatgtctgaagaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131432961 542 + 190429646 AGAGGTTGTGTTTTAGAAAATACTAATAACAGCTCTTGGATTAAAAACTCAACAGATGCTCTAAAGAGAACAATAGACATGGTTAAATATTGGTCTAGCAAGTTTGAAGTTTAAGAGTTGAACAATTCTCTCTGAATTCAATGGCTAGG---GAA----AAATTAAGAAAGGTAAAGAGAGGTAAAGTGAAGATAAAGAATTGTTGACATAAAGTTGTTGAAAATACTAGG-AAAAAAAAGGAAAGTAAACATAAAGATGGAAATAATTAAATAACTAATGTAAAGATTGTTTTAGAACTAGAAATATTGTAGACTTGAGATTTAAAGTTTTCATAGAAGTATCAACTTATATTAATGGAGAAATTCTACTGATAGACATCTCTTGAAGAAGCAATCGG------ATACTAATGATTAGGACAGAATCATAAAGGCTTCCAGAGTAGGAGGATAGAAATGTAATTTTCCATGGAATAAGAC----ATAGAAAAGAAAATTTATTCTTAAACATGTAGATGTTGTTAATAACTGGGACAAGACCATCAATGTCTGAAGAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130951966 541 + 189454096 agaggttgtgttttagaaaatactaataacagctcttggattaaaaactcaacagatgctctaaagagaacaatagacatggttaaatattggtctagcaagtttgaagtttaagagttgaacaattctctctgaattcaatggctagg---gaa----aaattaagaaaggtaaagagaggtaaagtgaagataaagaattgttgacataaagttgttgaaaatacta-t-aaaaaaaaggaaagtaaacataaagatggaaataattaaataactaatgtaaagattgttttagaactagaaatattgtagacttgagatttaaagttttcatagaagtatcaacttatattaatggagaaattctactgatagacatctcttgaagaagcaatcgg------atactaatgattaggacagaatcataaaggcttccagagtaggaggatagaaatgtaattttccatggaataagac----atagaaaagaaaatttattcttaaacatgtagatgttgttaataactgggacaagaccatcaatgtctgaagaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34943730 541 - 40319822 AGAGGTTGTGTTTTAGAAAATACTAATAACAGCTCTTGGATTAAAAACTCAACAGATGCTCTAAAGAGAACAATAGACATGGTTAAATATTGGTCTAGCAAGTTTGAAGTTTAAGAGTTGAACAATTCTCTCTGAATTCAATGGCTAGG---GAA----AAATTAAGAAAGGTAAAGAGAGGTAAAGTGAAGATAAAGAATTGTTGACATAAAGTTGTTGAAAATACTA-T-AAAAAAAAGGAAAGTAAACATAAAGATGGAAATAATTAAATAACTAATGTAAAGATTGTTTTAGAACTAGAAATATTGTAGACTTGAGATTTAAAGTTTTCATAGAAGTATCAACTTATATTAATGGAGAAATTCTACTGATAGACATCTCTTGAAGAAGCAATCGG------ATACTAATGATTAGGACAGAATCATAAAGGCTTCCAGAGTAGGAGGATAGAAATGTAATTTTCCATGGAATAAGAC----ATAGAAAAGAAAATTTATTCTTAAACATGTAGATGTTGTTAATAACTGGGACAAGACCATCAATGTCTGAAGAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4495733 541 - 9219162 agaggttgcgtTTTAGAAAATACTAATAACAGCTCTTGGATTAAAAACTCAACAGATGCTCTGAAGAGAACAATAGACATGGTTAAATATTGGTCTAGCAAGTTCGAAGTTTAAGAGTTGAACAATTCTCTCTGAATCCAATGGCTAGG---GAA----AAATTAAGAAAGGTAAAGAGAGGTAAAGTGAAGATAAAGAATTGTTGACAAAAAGTTGTTGAAAATACTA-G-AAAAAAAAAGGAAGTAAACATAAAGATGGAAATAATTAAATAACTAATGTAAAGATTGTTTTAGAACTAGAAATATTGTAGACTTGAGATTTAAAGTTTTCATAGAAGTATCAACTTATATTAATGGAGAAATTCTACTGATAGACATCTCTTGAAGAAGCAGTCGG------GTACTAATGATTAGGACAGAATCATAAAGACTTCCAGACTAGGAGGATAGAAATGTAATTTTCCATGGAATAAGAC----ATAGAAAAGAAAATTTATTCTTAAACATGTAGATGTTGTTAATTACTGGGATAAGATCATCAATGTCTGAAGAAA i cerAty1.NW_012000798v1 C 0 I 107 s chlSab2.chr7 79022519 542 + 135778131 agaggttgtgttttagaaaatactaataacagctcttggattaaaaactcaacagatgctctgaaaagaacaatagacatggttaaatattggtctagcaagtttgaagtttaagagttgaacaattctctctgaatccaatggctagg---gaa----aaattaagaaaggtaaagagaggtaaagtgaaaataaagaattgttgacataaagttgttgaaaatacta-gaaaaaaaaaggaaagtaaacataaagatggaaataattaaataactaatgtaaagattgttttagaactagaaatattgtagacttgagatttaaagttttcatagaagtatcaacttatattaatggagaaattctactgatagacatctcttgaagaagcaattgg------atactaatgattaggacagaatcataaagacttccagagtaggaggatagaaatgtaattttccatggaataagac----atagaaaagaaaatttattcttaaacatgtagatgttgttaataactgggacaagatcatcaatgtctgaagaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2792660 541 - 3013352 AGAGGTTGCGTTTTAGAAAATACTAATAACAGCTCTTGGATTAAAAACTCAACAGATGCTCTAAAGAGAACAATAGACATGGTTAAATATTGGTCTAGCAAGTTTGAAGTTTAAGAGTTGAACAATTCTCTCTGAATTCAATGGCTAGG---GAA----AAATTAAGAAAGGTAAAGAGACGTAAAGTGAAGATAAAGAATTGTTGACATAAAGTTGTTGAAAATACTA-G-AAAAAAAAGGAAAGTAAACATAAAGATGGAAATAATTAAATAACTAATGTAAAGATTGTTTTAGAACTAGAAATATTGTAGACTTGCGATTTAAAGTTTTCATAGAAGTATCAACTTATATTAATGGAGAAATTCTACTGATAGACATCTCTTGAAGAAGCAATCAG------ATACTAATGATTAGGACACAATCATAAAGGCTTCCAGAGTAGGAGGATAGAAATGTAATTTTCCATGGAATAAGAC----ATAGAAAAGAAAATTTATTCTTAAACATGTAGATGTTGTTAATAACTGGGACAAGACCATCAATTTCTGAAGAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6021172 537 + 8656713 AGAGGTTGTATATTAGAAAATACTAATAATAGCTCTTGGATTAAAAACTCAACAGATGCTCTGAAGAGAATAATAGACATGGTTAAATATTGGTCTAGCGAGTTTGAAGTTTAAGAGTTGAACAATTCTCGCTGAATCCAATGGCTAGG---GAA----AAATTAAGAAAGGTAAAGAGAGGTAAAGTGAAGATAAAGAATTGTTGACATAAAGTTGTTGaaaatacta-g-aaaaaaaaggaaagtaaacataaagatggaaataat----taattaatgtaaagatTGTTTTAGAACTAGAAATATTGTAGACTTGAGATTTAAAGTTTTCATAGAAGTATCAACTTATATTAATGGAGAAATTCTACTGATAGACATCTCTTGAAGAAGCAATGGA------GTACTAATGATTAGGACAGAATCATAAAGAGTTCCAGAGTAGGAGGATAGAAATGTAATTTTCCATGGAATAAGAC----ATAGAAAAGAAAATTTATTCTTAAACATGTAGATGTTGTTAATAACTGGGACAAGATCATCAATGTCTGAAGAAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129469514 546 - 190850796 AGTGGTTGCATTTTAGAAAATCCTGGTAACAGCTCTTGGATTAAAAACTCAACAGATGCTCTGAAGAGAACAATAGATATGGGTATATATAGAACTAGCAAGTTGGAAGTTTAAGAGCTGAATAATTCTCTCTGAGTCCAGTGGCTAGA---AAGAAATAAATCAAAAAAGATAAGGGGAGGTAAAGTGAAG-TAAAGAAGTTTTGATATACAATTGTTGAAAATACTA-G---AAAAAAGTTAAGAAAACATAAAGAT-GAAAT----ATATAACTAATTTAAAGATT-TTTTAGAAGTAGAAATATTTCAGACTTGAGATTGAAAGTTTTTATAGAAATATCAAGTGATATTAATGGAGAAATTCTACTGATAAACATCTTTTGAAGAAGCAATGTGGTCCTAATACTAATTTTTAGGATAGAATCATAAAGACTTTCAGAGTTAGAGGATAGAGAGGCAATATTCAGTGGAATACGACATAGATACAAAATCATATTTATTCATAAACATGTAGATGTTGTTCATAACTGAGACAATACCATCAGTGTCTGAAGAAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4096076 545 - 6311556 AGAGGTTGCATTTTAGAAAATCCTGGTAACAGCTCTTGGACTAAAAACTCAACAGATGCTCTGAAGAGAACAATAGATATGGTTAAATATAGAACTATCAAGTTGGAAGTTTAAGAGTTGAATAATTCCCTCTGAGTCCAGTGGCTAGG---AAGAACTAAATCAAAAAAGATAAGGGGAGGTAAAGTGAAGATAAGGAAGTTTTGATATACAATTGTTGAAAATACTA-C---AAAAAAGTTAAGAAAACATAAAGTTGGAAAT----AAATAAC-AATTTAAATATT-TTTTAGAAGTAGAAATATTTTAGACTTGAGATTGAAAGTTTTTATAGAAGTATCAAGTTATATTAATGAAGAAATTCTACTGATAGACATTTTTTGAAGAAGCAATGTGGTCCTAATACTAATTATTAGGACAGAATCATAAAGACTTTCAGAGTTAGAGGATAGAGAGGCAATAGTCAGTGGAATAAGAAGTAGATAAAAAATCACATTTATTCATAAAC--GTAGATGTTGTTCATAACCGGGACAATACCATCAATGTCTGAAGAAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14952382 547 + 15034901 AGAGGTTGCATTTTAGAAAATCCTGGTAACAGCTCTTGGATTAAAAACTCAACAGATGCTCTGAAGAGAACAATAGATATGGTTAAATATAGAACTAGCAAGTTGGAAGTTTAAGAGTTGAATAATTCTCTCTGAGTCCAGTGGCTAGG---AAGAACTAAATCAAAAAAGATAAGGGGAGGTAAAGTGAAGATAAAGAAGTTTTGATATACAATTGTTGAAAATACTA-G---AAAAAAGTTAAGACAACATAAAGATGGAAAT----AAATAACTAATTTAAAGATT-TTTTAGAAGTAGAAATATTTTAGACTTGAGATTGAAAGTTTTTATAGAAGTATCAAGTTACATTAATGGAGAAATTCTACTGATAGACATCTTTTGAAGAAGCAATGTGGTCCTAATACTAATTA-TAGGATAGAATCATAAAGACTTTCAGAGTTAGAGGACAGAGAGGCAATACTCAGTGGAATAAGAAGTAGATAGAAAATCATATTTATTCATAAACCTGTAGATGTTTTTCATAACTGGGATAATATCAACAATGTCTGAAGAAA i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I a score=7098.000000 s hg38.chr9_KI270719v1_random 73633 1 + 176845 T s panTro5.chr4 135098420 1 + 194502333 T i panTro5.chr4 C 0 I 106 s gorGor5.CYUI01000478v1 42515 1 - 137434 T i gorGor5.CYUI01000478v1 C 0 I 106 s nomLeu3.chr7b 90490545 1 - 115148730 t i nomLeu3.chr7b C 0 I 106 s rheMac8.chr5 131433503 1 + 190429646 T i rheMac8.chr5 C 0 I 105 s macFas5.chr5 130952507 1 + 189454096 t i macFas5.chr5 C 0 I 105 s macNem1.NW_012010911v1 34944271 1 - 40319822 T i macNem1.NW_012010911v1 C 0 I 106 s chlSab2.chr7 79023061 1 + 135778131 t i chlSab2.chr7 C 0 I 106 s manLeu1.NW_012103277v1 2793201 1 - 3013352 T i manLeu1.NW_012103277v1 C 0 I 106 s colAng1.NW_012114544v1 6021709 1 + 8656713 T i colAng1.NW_012114544v1 C 0 I 9400 s calJac3.chr3 129470060 1 - 190850796 T i calJac3.chr3 C 0 I 7 s cebCap1.NW_016107420v1 4096621 1 - 6311556 T i cebCap1.NW_016107420v1 C 0 I 111 s aotNan1.NW_018507635v1 14952929 1 + 15034901 T i aotNan1.NW_018507635v1 C 0 I 3091 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I e cerAty1.NW_012000798v1 4496274 107 - 9219162 I a score=19700.000000 s hg38.chr9_KI270719v1_random 73634 4 + 176845 TCCA s panTro5.chr4 135098527 4 + 194502333 TCCA i panTro5.chr4 I 106 C 0 s gorGor5.CYUI01000478v1 42622 4 - 137434 TCCA i gorGor5.CYUI01000478v1 I 106 C 0 s nomLeu3.chr7b 90490652 4 - 115148730 TCCA i nomLeu3.chr7b I 106 C 0 s rheMac8.chr5 131433609 4 + 190429646 TCCA i rheMac8.chr5 I 105 C 0 s macFas5.chr5 130952613 4 + 189454096 TCCA i macFas5.chr5 I 105 C 0 s macNem1.NW_012010911v1 34944378 4 - 40319822 TCCA i macNem1.NW_012010911v1 I 106 C 0 s cerAty1.NW_012000798v1 4496381 4 - 9219162 TCCA i cerAty1.NW_012000798v1 I 107 C 0 s chlSab2.chr7 79023168 4 + 135778131 TCCA i chlSab2.chr7 I 106 C 0 s manLeu1.NW_012103277v1 2793308 4 - 3013352 TCCA i manLeu1.NW_012103277v1 I 106 C 0 s calJac3.chr3 129470068 4 - 190850796 TCTA i calJac3.chr3 I 7 I 99 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4096622 111 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e colAng1.NW_012114544v1 6021710 9400 + 8656713 I a score=3094410.000000 s hg38.chr9_KI270719v1_random 73638 571 + 176845 AAAATAAAATAATAAAATTAACAAACAGATTTTTAGAATTACATCTGG-------------CAGTCATAGAGCACAATAGCATACTTGAAAATAAggaaaatatggccattttaatgatattgattcttcctatccatgagcatagaatg-ttttttcatttgtttcatcctctctgatatctttggtg--tttttagttcttacagagatctttcacctcactagttagctgtattcctaggtatttgattctttttgcagcaattgtgaatcagattgcattcctgatttggctctccgcttgactcttgttggtgtatgggaatgcgagtaatttttgtatgttctttttgtatcctgagactctgccaaaggtg--tttttcatcttaaggagctttcgggccttaagcttttgggcctataaagttttctacatat-aggatcatgtaatctacagacaaggatagtttgacgtcctttcttcctatttgggta-cctttatttctttctcttgcctaactgttttggcaaggacttccaatactatgttgaacaggagtggtgagagagggcatccttgtcttgt s panTro5.chr4 135098531 579 + 194502333 AAAATAAAATAATAAAATTAACAAACAGATTTTTAGAATTATATCTGGCAGGAGTTTCCATCAGTCATAGAGCGCAATAGCATACTTGAAAATAAggacaatatggccattt------tattgattcttcctatccatgagcatagaatc-ttttttcatttgtttcatcctctctgatatctttggtg--tttttagttcttacagagatctttcacctcactggttagctgtattcctaggtatttgattctttttgcagcaattgtgaatgagattgcattcctgatttggctctccgcttgactcttgttggtgtatgggaatgctagtaatttttgcatgttctttttgtatcctgagactctgccaaaggtg--tttttcatcttacggagcttttgggccttaagcttttgggcctataaagttttctacataa-aggatcatgtaatctacagacagggatagtttgacgtcctttcttcctatttgggtaccctttatttctttctcttgcctaactgttttggcaaggacttctaatactatgttgaacaggagtggtgagagagggcatccttgtcttgt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 42626 585 - 137434 AAAATAAAATAATAAAATTAACAAACAGATTTTTAGAATTATATCTGGCAGGAGTTTGGATCAGTCATAGAGCGCAATAGCATACTTGAAAATAAggacaatatggccattttaatgatattgattcttcctatccatgagcatagaatg-ttttttcatttgtttcatcctctctgatatctttggtg--tttttagttcttacagagatctttcacctcactagttagctgtattcctaggtatttgattctttttgcagcaattgtgaatcagattgcattcctgatttggctctccacttgactcttgttggtgtatgggaatgcgagtaatttttgtatgttctttttgtatcctgagactctgccaaaggtg--tttttcatcttaaggagctttcgggccttaagcttttgggcctataaagttttctacatat-aggatcatgtaatctacagacagggatagtttgacgtcctttcttcctatttgggtaccctttatttctttctcttgcctaactgtttcggcaaggacttccaatactatgttgaacaggagtggtgagagagggcatccttgtcttgC i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90490656 585 - 115148730 AAAATAAAATAACAAAATTAACAAACAGATTTTTAGAATTATATCTGGCAGGAGTTTGGATCAGTCATAGAGCGCAGTAGCATACTTGAAAATAAggacaatatggccattttaatgatattgattcttcctatccatgagcatagaatg-ttttttcatttgtttcatcctctctgatatctttggtg--tttttagttcttacagagatctttcacctcactagttagctgtattcctaggtatttgattctttttgcagcaattgtgaatgagattgcattcctgatttggatctccgcttgactgttgttggtgtatgggaatgctagtaatttttgtatgttctttttgtatcctgagactctgccaaaggtg--tttttcagcttaaggagcttttgggtcttaagcttttaggctaataaagttttctacatat-aggatcatgtaatctgcagacagggatagtttgacgtcctttcttcctatttgggtaccctttatttctttctcttgcctaactgttctggcaaggacttccaacactatgttgaacaggagtggtgagagagggcatccttgtcttgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131433613 587 + 190429646 AAAATAAAATAATAAAATTAACAAATAAATTTTTAGAATTACATCTGGCAGGAGTTTGGATCAGTCATAGACAGCAATAGAATACTTGAAAATAAggaccatatggccattttaatgatattgattcttcctatccatgagcatagaatg-ttttttcatttgtttaatcatctctgatgtctttggta-ttttttagttcttatagagatctttcacctgactagttagctgtattcctaggtatttgattctttttgcaggaattgtgactgagattgcatttctgatttggctctccgcttaactgttgttggcgtatgggaatgctagtaatttttgtatgctgtttttgtatcctgagactctgccgaaagtg-ttttttcagcttcacgagcttttgggacttaagcttttaggcctataaagttttctatatat-aggatcatgtaatctgcaaacagggatagtttgacatcctttcttcctatttgggtacccttcatttctttctcttgcctaattgttctggcaaggacttccaatactatgttgaacagaagtggtgagagagggcatccttttcttgt i rheMac8.chr5 C 0 I 8335 s macFas5.chr5 130952617 587 + 189454096 AAAATAAAATAATAAAATTAACAAATAAATTTTTAGAATTACATCTGGCAGGAGTTTGGATCAGTCATAGACAGCAATAGAATACTTGAAAATAAggaccatatggccattttaatgatattgattcttcctatccatgagcatagaatg-ttttttcatttgtttaatcatctctgatgtctttggta-ttttttagttcttacagagatctttcacctgactagttagctgtattcctaggtatttgattctttttgcaggaattgtgactgagattgcatttctgatttggctctccgcttaactgttgttggcgtatgggaatgctagtaatttttgtatgctgtttttgtatcctgagactctgccgaaagtg-ttttttcagcttcacgagcttttgggacttaagcttttaggcctataaagttttctatatat-aggatcatgtaatctgcaaacagggatagtttgacatcctttcttcctatttgggtacccttcatttctttctcttgcctaattgttctggcaaggacttccaatactatgttgaacagaagtggtgagagagggcatccttttcttgt i macFas5.chr5 C 0 I 8334 s macNem1.NW_012010911v1 34944382 587 - 40319822 AAAATAAAATAATAAAATTAACAAATAAATTTTTAGAATTACATCTGGCAGGAGTTTGGATCAGTCATAGACAGCAATAGAATACTTGAAAATAAggaccatatggccattttaatgatattgattcttcctatccatgagcatagaatg-ttttttcatttgtttaatcatctctgatgtctttggta-ttttttagttcttacagagatctttcacctgactagttagctgtattcctaggtatttgattctttttgcaggaattgtgactgagattgcatttctgatttggctctccgcttaactgttgttggcgtatgggaatgctagtaatttttgtatgctgtttttgtatcctgagactctgccgaaagtg-ttttttcagcttcacgagcttttgggacttaagcttttaggcctataaagttttctatatat-aggatcatgtaatctgcaaacagggatagtttgacatcctttcttcctatttgggtacccttcatttctttctcttgcctaattgttctggcaaggacttccaatactatgttgaacagaagtggtgagagagggcatccttttcttgt i macNem1.NW_012010911v1 C 0 I 8344 s cerAty1.NW_012000798v1 4496385 585 - 9219162 AAAATAAAATAATAAAATTAACAAATAAATTTTTACAATTATATCTGGCAGGAGTTTGGATCAGTCATAGAGAGCAATAGAATACTTGAAAATAAggactatatgtccattttaatgatattgattcttcctatccatgagcatagaat--ttttttcatttgtttaatcatctctgatgtctttggca-ttttttagttcttacagagatctttcacctcactagttagctgtattcctaggtatttgattctttttgcaggaattgtgactgagattgcattcctgatttggctctctgcttaactgttgttggcgtatgggaatgctagtaatttttgtatgctgtttttgtatcctgagactctgccgaaagtg--tttttcagcttcaggagcttttgggccttaagcttttaggcctataaagttttctacatat-aggatcatgtaatctgcaaacagggatagtttgacgtcctttcttcctatttgggtacccttcatttctttctcttgcctaattgttctggcaaggacttccaatactatgttgaacagaagtggtgagagagggcatccttttcttgt i cerAty1.NW_012000798v1 C 0 I 8361 s chlSab2.chr7 79023172 588 + 135778131 AAAATAAAATAATAAAATTAACAAATAAATTTTTAGAATTATATCTGGCAGGAGTTTGGATCAGTCATAGAGAGCAATAGAATACTTGAAAATAAggactatatggacattttaatgatattgattcttcctatccatgagcatagaatgtttttttcatttgtttaatcatctctgatgtctttggta-ttttttagttcttacagagatctttcacctcactagttagctgtattcctaggtatttgattctttttgcaggaattgtgactgagattgcattcctgatttggctctctgcttaactgttgttggcatatgggaatgctagtaatttttgtatgctgtttttgtatcctgagactctgctgaaagtg-ttttttcagcttcaggagcttttgggccttaagcttttaggcctataaagttttctacatat-aggatcatgtaatctgcaaacagggatagtttgacgtcctttcttcctatttgggtacccttcatttctttctcttgcctaattgttctggcaaggacttccaatactatgttgaacagaagtggtgagagagggcatccttttcttgt i chlSab2.chr7 C 0 I 8377 s manLeu1.NW_012103277v1 2793312 588 - 3013352 AAAATAAAATAATAAAATTAACAAATAAAGTTTTAGAATTATATCTGGCAGGAGTTTGGATCAGTCATAGAGAGCAATAGAATACTTGAAAATAAggaccatatggccattttaatgatattgattcttcctatccatgagcatagaatg-ttttttcatttgtttaatcatctctgatgtctttggta-ttttttagttcttacagagatctttcacctgactagttagctgtattcctaggtatttgattctttttgcaggaattgtgactgagattgcattcctgatttggctctccgcttaactgttgttggcgtatgggaatgctagtaatttttgtatgctgtttttgcatcctgagactctgccgaaagtgtttttttcagcttcacgagcttttgggacttaagcttttaggcctataaagttttctatatat-aggatcatgtaatctgcaaacagggatagtttgaaatcctttcttcctatttgggtacccttcatttctttctcttgcctaattgttctggcaaggacttccaatactatgttgaacagaagtggtgagagagggcatccttttcttgt i manLeu1.NW_012103277v1 C 0 C 0 s calJac3.chr3 129470171 579 - 190850796 aaaataaaataataaaattaacaaataaatttttagaattatatCTGGCAGTAA-------AGGTCATAGAGAGCAATAGCATACTTG-AAATAAggacaatatggccattttaatgatattgattcttcctatccatgagcatagaatg-ttttttcatttgtttcatcatctctgatgtctttggtgtttttttacctcttacagagatatttcacctcactagttagttgtattcctagatatttgattatttttgcagcaattatgaatgagattgcattccagatttggctctctgcttgactgttgttggtgtatggtaatgctagtaatttttgtacgttgtttttatatcctgtgactctgctgaaggtg--tttttcagcttcaggagcttttggtccttaagcttttgggcctataaagttttctacaggt-aggatcatgtaatctgcatacaggaatagtttgatgttctctcttcctatttgggtatgcttcattgctttctcttgtctaactgttctggcaaggacttccaatattaagttgaacagaagtagtggcagaaggcattcttgttttgt i calJac3.chr3 I 99 I 2079 s cebCap1.NW_016107420v1 4096733 563 - 6311556 AAAATAAAATAATAAAATTAACAAATAAATTTTTAGAATTATATCTGGCAGTAA-------AGGTCATAGAGAGCAATAGCATACTTG-AAATAAggacaatatggccattttaatgatattgattcttcctattcatgagcatggaatg-ttttttcatttgtttcatcatctctgatgtctttggtg-ttttttacttcttacagagatatttcacctcactagttagttgtattcctagatatttaattatttttgcagtaattatgaatgagattgcattcctgatttggctctccgcttgactattgttggtgtacggtaatgctagtcatttttgtgtgttg-ttttatatcctgtgactctgctgaaggtg--tttctcagcttaagg---------------agctttggggcttataaagctttttacagataaggatcatgtaatctgcatacaggaatagtttgacgttttctcttcctatttgggtatgctttattgctttctcttgtctaactgttctggcaaggacttctaatattaagttgaacagaagtagtgacagaggacattcttgtcttgt i cebCap1.NW_016107420v1 I 111 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e saiBol1.JH378129 6535336 3435 - 25294431 I e colAng1.NW_012114544v1 6021710 9400 + 8656713 I a score=5159.000000 s hg38.chr9_KI270719v1_random 74209 1 + 176845 g s panTro5.chr4 135099110 1 + 194502333 g i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 43211 1 - 137434 A i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90491241 1 - 115148730 g i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131442535 1 + 190429646 g i rheMac8.chr5 I 8335 C 0 s macFas5.chr5 130961538 1 + 189454096 g i macFas5.chr5 I 8334 C 0 s macNem1.NW_012010911v1 34953313 1 - 40319822 g i macNem1.NW_012010911v1 I 8344 C 0 s cerAty1.NW_012000798v1 4505331 1 - 9219162 g i cerAty1.NW_012000798v1 I 8361 C 0 s chlSab2.chr7 79032137 1 + 135778131 g i chlSab2.chr7 I 8377 C 0 s manLeu1.NW_012103277v1 2793900 1 - 3013352 g i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6031110 1 + 8656713 g i colAng1.NW_012114544v1 I 9400 C 0 s cebCap1.NW_016107420v1 4097296 1 - 6311556 g i cebCap1.NW_016107420v1 C 0 I 2072 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I a score=5500.000000 s hg38.chr9_KI270719v1_random 74210 1 + 176845 c s panTro5.chr4 135099111 1 + 194502333 c i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 43212 1 - 137434 C i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90491242 1 - 115148730 c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131442536 1 + 190429646 c i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130961539 1 + 189454096 c i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34953314 1 - 40319822 c i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4505332 1 - 9219162 c i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79032138 1 + 135778131 c i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2793901 1 - 3013352 c i manLeu1.NW_012103277v1 C 0 I 19234 s colAng1.NW_012114544v1 6031111 1 + 8656713 c i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I a score=389705.000000 s hg38.chr9_KI270719v1_random 74211 99 + 176845 ACAaaatacactaaaataaaattgcttaaaactagtgataaagaaaaattctcaaagcagccaatgacaaaaacacggtttgcacagaggaacaaaaaa s panTro5.chr4 135099112 99 + 194502333 ACAaaatacactaaaataaaattgcttaaaactagtgataaagaaaaattctcaaagcagccaatgacaaaaacacggtttgcacagaggaacaaaaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000478v1 43213 99 - 137434 ACAaaatacactaaaataaaattgcttaaaactagtgataaagaaaaattctcaaagcagccaatgacaaaaacacggtttgcacagaagaacaaaaaa i gorGor5.CYUI01000478v1 C 0 C 0 s nomLeu3.chr7b 90491243 99 - 115148730 AcaaaatacactaaaataaaattgctcgaaactagtgataaagaaaaattctcaaaacagtcaatgacgaaaacacggtttgcacagaggaacaaaaaA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131442537 99 + 190429646 acaaaatacactaaaataaaattgctcaaaactagtgataaagaaaaattctcaaagcagccaattgcaaaaacacagtttgcacagaggaacaaaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130961540 99 + 189454096 acaaaatacactaaaataaaattgctcaaaactagtgataaagaaaaattctcaaagcagccaattgcaaaaacacagtttgcacagaggaacaaaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34953315 99 - 40319822 acaaaatacactaaaataaaattgctcaaaactagtgataaagaaaaattctcaaagcagccaattgcaaaaacacagtttgcacagaggaacaaaaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4505333 99 - 9219162 acaaaatacactaaaataaaattgctcaaaactagtgataaagaaaaattctcaaagcagccaattgcaaaaacacagtttgcacagaggaacaaaaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79032139 96 + 135778131 acaaaatacactaaaataaaattgctcaaaactagtgataaagaaaaattctcaa---agccaattgcaaaaacacagtttgcacagaggaacaaaaaa i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6031112 99 + 8656713 acaaaatacactaaaataaaactgctcaaaactagtgataaagaaaaattctcaaagcagccaattgcaaaaacacagtttgcacagaggaacaaaaaa i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I a score=1724793.000000 s hg38.chr9_KI270719v1_random 74310 554 + 176845 tgccagcaaacattttattggaaacaaagaaaattagaagataatgaagcaacatctttaaagtactggaagataaacattgtcagctggaaattgtagactcagagaaactatctttcaagatgtaggtgaaataaagattttgttctggcacttagaacctgaaataaatcatcaccagtaaaacagcactat----------aaaaaatgttaaagaaaatgtttcaggcagacgtaaaataatatcaaaaggaaatttggatctacatagaagaatgaaaagcactggaaatggtatcaacatggttaaatata-taagatccttttatttctgtttgaattcaattgattgtttaaaCAaggggtcagcaagctatagcttcatgggtggactgcctgtttatgtgaacaaatttttactgagatacattcatgctcatttgtttatgtattatcaatgggtgctatagaattacaaaagcagaattaagtagttgtaacagagcctaatggcacacaagcctaaaatatttaGCTTTTAAGGAAAGCATGTccggttct s panTro5.chr4 135099211 554 + 194502333 tgtcagcaaacattttattggaaacaaagaaaattagaagatgatgaagcaacatctttaaagtactggaagataaacattgtcagctggaaattgtagactcagagaaactatctttcaagatgtaggtgaaataaagattttgttcaggcacttagaacctgaaagaaatcatcaccagtaaaacaacactat----------aaaaaatgttaaagaaaatgtttcaggcagaagtaaaataatatcaaaaggaaatttggatctacatagaagaatgaaaagcactggaaatggtatcaacatggttaaatata-taagatccttttatttctgtttgaattcaattgattgtttaaaCAaggggtcagcaagctatagcttcatgggtggactgcctgtttatgtgaacgaatttttactgacacacattcatgctcatttgtttatgtattatcaatgggtgctatagaattacaaaagcggaattaagtagttgtaacagagcctaatggcacacaagcctaaaatatttaGCTTTTAAGAAAAGCATGTCCGGTTCT i panTro5.chr4 C 0 I 1 s gorGor5.CYUI01000478v1 43312 554 - 137434 tgccagcaaacattttattggaaacaaagaaaattagaagataatgaagcaacatctttaaagtactggaagataagcattgtcagctggaaattgtagactcagagaaactatctttcaagatgcaggtgaaataaagattttgttcaggcacttagaacctgaaagaaatcatcaccagtaaaacaacactat----------aaaaaatgttaaagaaaatgcttcaggcagaagtaaaataatatcaaaaggaaatttggatctacatagaagaatgaaaagcactggaaatggtatcaacatggttaaatata-taagatccttttatttctgtttgaattcaattgattgtttaaaCAaggggtcagcaagctatagcttcatgggtggactgcctgtttatgtgaacaaatttttactgagacacattcatgctcatttgtttatgtattatcaatgggtgctatagaattacaaaagcagaattaagtagttgtaacagagcctaatggcacacaagcctaaaatatttaGCTTTTAAGGAAAGCATGTccggttct i gorGor5.CYUI01000478v1 C 0 C 0 s rheMac8.chr5 131442636 559 + 190429646 tgccagcaaacattttactggaaacaaagaaaattagaagataatgaagcaacatctttaaagtactggaagataaacattgtcagctagaaattgtagacccagagaaactatctttcaatatgcaggtgaaataaagattttgttcaggcactcagaagctgaaagaaatcatcaccagtaaaacaccaccatt-----aaaaaaaaaatgttaaagaaaatgtttcaggcagaagtaaaagaatatcaaaaggaaatctggatctgcatagaagaataaaaagcactggaaatggtgtcaacatgattaaatatg-taagatccttttatttatgtttgaattcaattgattgtttaaaCAaggggtcagcaagctatagcttcatggttggactgcctgtttatgtgaacaaatttttactaagacacattcatgctcatttttttatgtattgtcaatgggtgctatagaattacaaaagtgtaattaagtcattgtaacacagcctaatggcacacaagcctaaaatatttaGCTTTTTAGAAAAGCATGTCCAGTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130961639 559 + 189454096 tgccagcaaacattttactggaaacaaagaaaattagaagataatgaagcaacatctttaaagtactggaagataaacattgtcagctagaaattgtagacccagagaaactatctttcaatatgcaggtgaaataaagattttgttcaggcactcagaagctgaaagaaatcatcaccagtaaaacaccaccatt-----aaaaaaaaaatgttaaagaaaatgtttcaggcagaagtaaaagaatatcaaaaggaaatctggatctgcatagaagaataaaaagcactggaaatggtgtcaacatgattaaatatg-taagatccttttatttatgtttgaattcaattgattgtttaaaCAaggggtcagcaagctatagcttcatggttggactgcctgtttatgtgaacaaatttttactaagacacattcatgctcatttttttatgtattgtcaatgggtgctatagaattacaaaagtgtaattaagtcattgtaacacagcctaatggcacacaagcctaaaatatttaGCTTTTTAGAAAAGCATGTCCAGTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34953414 563 - 40319822 tgccagcaaacattttactggaaacaaagaaaattagaagataatgaagcaacatctttaaagtactggaagatcaacattgtcagctagaaattgtagacccagagaaactatctttcaatatgcaggtgaaataaagattttgttcaggcactcagaagctgaaagaaatcatcaccagtaaaacaccaccatt--aaaaaaaaaaaaatgttaaagaaaatgtttcaggcagaagtaaaagaatatcaaaaggaaatctggatctgcatagaagaataaaaagcactggaaatggtgtcaacatgattaaatatgttaagatccttttatttatgtttgaattcaattgattgtttaaaCAaggggtcagcaagctatagcttcatggttggactgcctgtttatgtgaacaaatttttactaagacacattaatgctcatttttttatgtattgtcaatgggtgctatagaattacaaaagtgtaattaagtcattgtaacacagcctaatggcacacaagcctaaaatatttaGCTTTTTAGAAAAGCATGTCCAGTTCT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4505432 564 - 9219162 tgccagcaaacattgtactggaaacaaagaaaattagaagataatgaagcaacatctttaaagtacgggaagataaacattgtcagctagaaattgtagacccagagaaactatctttcaatatgcaggtgaaataaagattttgttcaggcactcagaagctgaaagaaatcatcaccagtaaaacaccaccattaaaaaaaaaaaaaaatgttaaagaaaatgtttcaggcagaagtaaaagaatatcaaaaggaaatctgaatctacatagaagaataaaaagcactggaaatggtgtcaacatgattaaatatg-taagatccttttatttctgtttgaattcaattgattgtttaaaCAaggggtcagcaagctatagcttcatggttggactgcctgtttatgtgaacaaatttttactaagacacattcatgctcatttttttatgtattgtcaatgggtgctatagaattacaaaagtgtaattaagtcattgtaacacagcctaatggcacacaagcctaaaatatttaGCTTTTTAGAAAAGCATGTCCAGTTCT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79032235 558 + 135778131 tggcagcaaacattttactggaaacaaataaaattagaagataatgaagcaacatctttaaagtactggaagataaacattgtcagctagaaattgtagacccagagaaactatctttcaagatgcaggtgaaataaagattttgttcaggcactcagaagctgaaagaaatcatcaccagtaaaacaataccat------aaaaaaaaaatgttaaagaaaatgtttcaggcagaagtaaaagaatatcaaaaggaaatttggatctacatagaagaataaaaagcactggaaatggtgtcaacatgattaaatata-taagatccttttatttctgtttgaattcAATTCATTGTTTAAACAaggggtcagcaagctatagctttatggttggactgtctgtttatgtgaacaaatttttactaagacacattcatgctcatttgtttatgtattatccatgggtgctatagaattacaaaagtgtaattaagtcattgtaacagagcctaatggcacagaagcctaaaatatttaGCTTTTTAGAAAAGCATGTCCAGTTCT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6031211 558 + 8656713 tgccagcaaacattttactggaaacaaagaaaattagaagataatgaagcaacatctttaaagtactggaagataaacattgtcagctggaaattgtagacccagagaaactatctttcaagatgcaggtgaaataaagattttgttcagacactcagaagctgaaagaaatcatcaccagtaaaacaacaccat------aaaaaaaaaaagttaaagaaaatgtttcaggcagaaggaaaagaatatcaaaaggaaatctggatctacatagaagaataaaaagcactggaaatggtgtcaacatgattaaatata-taagatccttttatttctgtttgaattcaattgattgtttaaaCAaggtgtcagcaagctatagcttcatggttggactgcccgtttatgtgaacaaatttttactaagacacattcatgctcatttgtttatgtattatcaatgggtgctatagaattacaaaagtgtaactgagtcattataacagagcctaatggcacacaagcctaaaatatttaGCTTTTTAGAAAAGCATGTCCAGTTCT i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=2196381.000000 s hg38.chr9_KI270719v1_random 74864 955 + 176845 ggtggctcatgcctgtaatcccagcattttgggaggccgagatgtgcggatcacgaggtcaggaaattgagaccatcctgggcaacatgatgaaaccctgtgtctactaaaaatacaaacattagctgggtgtggtggcatgtgcctgtaatcccagctactcgggaggctgaggcaggacaatctcttgaacccgggaggcagaggttgcagtgagctgagatggcactactgcactgcagcctggt-acaaagctagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaGAGAGAGAGAGAAGAAAACAACATTATTAACCTCTAAtttaaacaagaataataacaatttataatgagtttaaaacatatataaaaataaatcacatgacaataacagaacaacagttaggataaaataatgaaaatgttgtta--ttcatgatactgtatgtaaagtagtatattataatttgaaggtagaatgtgatgagttaaacatgtatactacaaactcaaaagcaaccattaaaattaacaatatagagagttttaattctcaagtaaaaaaggagataagatgaaaccgtaaaatatatttaattcatagaaaagaaggcaaacaagagggaaaataagcaaaaaacagatgggatggtaggggaagcaaaattttattaccatcttcttag-----------ttttttttttttcctctgctaagcctgagaattaaattgatataagacagatcaacaggaaaatgcatacaaatttatttaatacatgcattatgtggcatgagagattctttaagg-aaggaagactccatgacataatcacttatgttctgaagtagacacagagtagtaaattgtgaaatatgacaagacaaaggagctggaactagtgtagttaattgggtgaagaggtgattaacaggataagggttggtttaacaaggt s gorGor5.CYUI01000478v1 43866 944 - 137434 ggtggctcatgcctgtaatcccagcattttgggaggccgagatgggcggatcacgaggtcaggaaattgagaccatcctgggcaacaagatgaaaccccgtatctactaaaaatacaaacattagctgggtgtggtggcatgtgcctgtaatcccagctactcgggaggctgaggcaggacaatctcttgaacccgggaggcagaggttgcagtgagctgagatggcactactgcactgcagcctggt-acaaagctagactctgtctcaaaaaaaaaaaaaaaaaa---------aGAGAGAGAAGAAAACAACATTATTAACCTCTAAtttaaacaagaataataacaatttataatgagtttacaacatatataaaaataaatta-atgacaataacagaacaacagttaggataaaataatgaaaatgttgttac-ttcatgatactgtatgtaaagtagtaaattataatttgaaggtagactgtgatgagataaacatgtatactacaaactcaaaagcaaccattaaaattaacaatatagagagttttaattctcaagtaaaaaaggagataagatgaaaccataaaatatatttaattcatagaaaagaaggcaaacaagagggaaaataagcaaaaaacagatgggaTGgtaggggaagcaaaattttattaccatcttcttag-------------ttttttttttcctctgctaagcctgagaattaaattgatataagacagatcaacaggaaaatgcatacaaatttatttaatacatgtattatgtggcatgagagattctttaagg-aaggaagactccatgacataatcacttatgttctgaagtagacacagagtagtaaattgtgaaatatgacaagacaaaggagctggaactagtgtagttaattgggtgaagaggtgattaacaggataagggttggtttaacaaggt i gorGor5.CYUI01000478v1 C 0 N 0 s rheMac8.chr5 131443195 937 + 190429646 ggtggttcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcaggagattgagaccatcctgggcaacatgatgaaaccctctatctactaaaaatacaaacactagctgggtgtggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattacttgaacccgggaggcggaggttgcagtaagccgagatggcaccactgcactccaacctggtgacagaggtagactccatc------aaaaataaaaaGAG---------AGAGAGAGATGGAAACAACATTATTAACCCCTAATTTTaacaagaataataata---tataatgagtttacaacatacataaaaataaattacatgacaataacagaacaacagttaggataaaataatgaaaatattgttactttcattatactgtatgtaaagtagtatatcatgatttgaaggtagaacgtgatgagttaaagatgtatactacaaactcaaaagcaaccgttaaaattaacaatataaagagctttaattaccaagtaaaaaaagagagaagatgaaaccataaaatatatttaattcatagaaaagaaggaaaacaagaaggaaaataagtgaaaaacagatgggatgataggggaagcaaaattgtattaccatcttcttag---------------ttttttttcctctgctaggcctgagaattacattgatataagacagatcaacaggaaaatgcatacaaatttatttaatatatgtattatgtggcatgagagattcattaaggaaaagaagacccaatgacattatcacttatgttctgaattagatacagagtagtaaattgtgaaatatgacaggacaaaggagctggaactagtgtagttaattgggtggagaggtgattaacagaataagggttggattaacaaggt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130962198 937 + 189454096 ggtggttcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcaggagattgagaccatcctgggcaacatgatgaaaccctctatctactaaaaatacaaacactagctgggtgtagcggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattacttgaacccgggaggcggaggttgcagtaagccgagatggcaccactgcactccaacctggtgacagaggtagactccatc------aaaaataaaaaGAG---------AGAGAGAGATGGAAACAACATTATTAACCCCTAAtttaaacaagaataataata---tataatgagtttacaacatacataaaaataaattacatgacaataacagaacaacagttaggataaaataatgaaaatattgttactttcattatactgtatgtaaagtagtatatcatgatttgaaggtagaacgtgatgagttaaagatgtatactacaaactcaaaagcaaccgttaaaattaacaatataaagagctttaattaccaagtaaaaaaagagagaagatgaaaccataaaatatatttaattcatagaaaagaaggaaaacaagaaggaaaataagtgaaaaacagatgggatgataggggaagcaaaattgtattaccatcttcttag---------------ttttttttcctctgctaggcctgagaattacattgatataagacagatcaacaggaaaatgcatacaaatttatttaatatatgtattatgtggcatgagagattcattaaggaaaggaaaccccaatgacattatcacttatgttctgaattagatacagagtagtaaattgtgaaatatgacaggacaaaggagctggaactagtgtagttaattgggtggagaggtgattaacagaataagggttggattaacaaggt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34953977 932 - 40319822 ggtggttcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcaggagattgagaccatcctgggcaacatgatgaaaccctctatctactaaaaatacaaacactagctgggtgtagcggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattacttgaacccgggaggcggaggttgcagtaagccgagatggcaccactgcactccaacctggtgacagaggtagactccatc------aaaaataaaaaGAG---------AGAGAGAGATGGAAACAACATTATTAACCCCTAAtttaaacaagaataataata---tataatgagtttacaacatacataaaaataaattacatgacaataacagaacaacagttaggataaaataatgaaaatattgttactttcattatactgtatgtaaagtagtatatcatgatttgaaggtagaacgtgatgagttaaagatgtatactacaaactcaaaagcaaccgttaaaattaacaatataaagagctttaattaccaagtaaaaaaagagagaagatgaaaccataaaatatatttaattcatagaaaagaaggaaaacaagaaggaaaataagtgaaaaacagatgggatgataggggaagcaaaattgtattaccatcttcttag---------------gtttttttcctctgctaggcctgagaattacattgatataagacagatcaacaggaaaatgcatacaaatttatttaatatatgtattatgtggcatgagagattcatt-----aaggaaaccccaatgacattatcacttatgttctgaattagatacagagtagtaaattgtgaaatatgacaggacaaaggagctggaactagtgtagttaattgggtggagaggtgattaacagaataagggttggattaacaaggt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4505996 937 - 9219162 ggtggttcattcctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcaggagattgagaccatcctgggcaacatgatgaaaccctctatctactaaaaatgcaaacactagctgggtgtggtggcacatgcctgtaatcccagctactcggaaggctgaggcaggagaattacttgaacccgggaggcggaggttgcagtaagccgagatggcaccactgcactccaacctggtgacagaggtagactccatc------aaaaataaaa--aG---------AGAGAGAGATGGAAACAACATGATTAACCCCTAAtttaaacaagaataataata---tataatgagtttacaacatacataaaaataaattacatggcaataacagaacaacagttaggataaaataatgaaaatattgttactttcattatactgtatgtaaagtagtatatcatgatttgaaggtagaacgtgatgagttaaagatgtatactacaaactcaaaagcaaccgttaaaattaacaatataaagagctttaattaccaagtaaaaaaagagagaagatgaaaccataaaatatatttaattcatagaaaagaaggaaaacaagaaggaaaataagtgaaaaacagatgggatgataggggaagcaaaattgtattaccatcttcttag-------------ttttttttttcctctgctaggcctgagaattacattgatataagacagatcaacaggaaaatgcatacaaatttatttaatatatgtattatgtggcatgagagattcattaaggaaaggaagacccaatgacattatcacttatgttctgaattagatacagagtagtaaattgtgaaatatgacaagacaaaggagctggaactagtgtagttaattgggtggagaggtgattaacagaataagggttggtttaacaaggt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79032793 944 + 135778131 ggtggttcatgcctataatcccagcactttgggaggccgaggtgggcggatcatgaggtcaggagattgagaccatcctgggcaacatgatgaaaccccctatctactaaaaaaacaaacagtagctgggcgtggtggcacgtgcctgtaataccagctactcgggaggctgaggcaggagaattacttgaacccgggaggcggaggtggcagtgagccgagatggcaccactgcactccaacctggtgacagaggtagactccatc------AAAAATAG----AG---------AGAGAGAGAAGGAAACAACATTATTAACCCCTAATTTAaacaagaataacaata---tataatgagtttacaacatacctaaaaataaattacatgacaataacagaacaac----aggataaaataatgaaaatgttgttactttcattatactgtatgtaaagtagtatattatgatttgaaagtagaaggtgatgagttaaagatgtatactacaaactcaaaagcaaccattaaaattaacaatataaagagctttaattaccaagtaaaaaaacagagaagatgaaaccataaaatatatttaattcatagaaaagaaggaaaacaagaaggaaaataagcaaaaaacagatgggatggtaggggaagcaaaattgtattaccatcttcttaggtttttttttttttttttttttccctctgctaggcctgagaattaaattgatataagacagatcaacaggaaaatgcatacaaatttatttaatatatgtattatgtggcatgaaagattcattaaggaatggaagatctaatgacataatcacttatgttctgaattagatacagagtagtaaattgtgaaatatgacaagacaaaggagctggaactagtgtagttaattgggtggagaggtgattaacaggataagggttggtttaacaaggt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6031769 942 + 8656713 ggtggttcatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacgaggtcaggagattgaaaccatcctgggcaacatgatgaaaccccgtatctactaaaaatacaaacactagctgggcgtggtggtatgtgcctgtaatcccagctactcgggaggctgaggcaggagaattacttgaacccgggaggcggaggttgcagtgagctgagatggcaccactgcactccaacctggtgacagaggtagactccatc------aaaaataaaaaGAG---------AGAGAGAGAAGGAAACAACATTATTAACCCCTAAATTaaacaaaaataataata---tataatgagtttacaacatacataaaaataaattacatgacaataacagaacaacac--aggataaaataatgaaaa---tgttactttcattatactgtaggtaaagtagtatattatgatttgaaggtagaacgtgatgagttaaagatgtatactacaaactcaaaagcaaccattaaaattaacaatataaagagctttaattaccaagtaaaaaaagagagaagatgaaaccataaaatatatttgattcatagaaaagaaggaaaacaagaaggaaaataagcaaaaaacaaatgggatggtaggggaagcaaaattgtattaccatcttcttag-----ctttttttttttttttcccctctactaggcctgagaattaaattgatgtaagacagatcaacaggaaaatgcatataaatttatttaatatatgtattatgtggcatgagagattcattaagggaaggaagacccaatgacataatcacctatgctctgaattagatacagagtagtaaattgtgaaatatgacaagacaaaggagctggaactagtgtagttaactgagtggagaggtgattaacaggataagggttggtttaacaaggt i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e nomLeu3.chr7b 90491342 0 - 115148730 C e panTro5.chr4 135099765 1 + 194502333 I a score=26604.000000 s hg38.chr9_KI270719v1_random 75819 14 + 176845 atgtttgtacaggt s rheMac8.chr5 131444132 14 + 190429646 ctgtttgtacaggt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130963135 14 + 189454096 ctgtttgtacaggt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34954909 14 - 40319822 ctgtttgtacaggt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4506933 14 - 9219162 ctgtttgtacaggt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79033737 14 + 135778131 ctgtttgtacaggt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6032711 14 + 8656713 ctgtttgtacaggt i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e nomLeu3.chr7b 90491342 0 - 115148730 C e panTro5.chr4 135099765 1 + 194502333 I a score=638285.000000 s hg38.chr9_KI270719v1_random 75833 360 + 176845 ttcccttgcctcaacttctcatcctgggtgatgagactgttactttccttcttgtataaagagggcaactttcatgtagaaattttacctcctacttttaagaaaaaggaaaatcagagtgctttaaaggaaaatcagagtgccttaaaggaaaatcagagtgctttaaaggaaagtcagagtgctttaaaggaaaatcagagtgcttttcttgcatctgctatttttcaagtgtctttaactc-aaaaaaatcaatatgccaaagtggcacgtttcggggtatctggttctgaattccttcaggaaagatagaaagcaaaagcaaaataataggtttaaaactaaaaatatccaggtgcg s gorGor5.CYUI01000801v1 50291 297 + 95358 ttcccttgcctcaacttctcatcctgggtgatgagactgttactttccttcttgtataaagagggcaactttcatgtagaaattttacctcctacttttaagaaaaaggaaaatcagagtgctttaaaggaaaatcagagtgc---------------------------------------------------------------ttttcttgcatctgctatttttcaagtgtctttaactc-aaaaaaatcaatatgccaaagtggcatgtttgggggtatctggttctgaattccttcaggaaagatagaaagcaaaagcaaaataataggtttaaaactaaaaatatccaggtgtg i gorGor5.CYUI01000801v1 N 0 C 0 s rheMac8.chr5 131444146 275 + 190429646 ttcccttgactcaacttctcatcctgtgtgatgagactgttactttccttcttgtat--agagggcagctttcatgtagaaattttacctcctacttttaagaaaaaggaaaatcaaagtgc------------------------------------------------------------------------------------ttttcttgcatctgctgtttttcaagtgtctttaactcaaaaaaaatcaatatgccaaagtggcatgtttgagggcatctggctctgaattccttcaggaaagatagaaagcaaaagaaaaatgataggtttaaaactaaaaatagcagggcgcg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130963149 274 + 189454096 ttcccttgactcaacttctcatcctgtgtgatgagactgttactttccttcttgtat--agagggcagctttcatgtagaaattttacctcctacttttaagaaaaaggaaaatcaaagtgc------------------------------------------------------------------------------------ttttcttgcatctgctgtttttcaagtgtctttaactc-aaaaaaatcaatatgccaaagtggcatgtttgagggcatctggctctgaattccttcaggaaagatagaaagcaaaagaaaaatgataggtttaaaactaaaaatagcagggcgcg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34954923 274 - 40319822 ttcccttgactcaacttctcatcctgtgtgatgaaactgttactttccttcttgtat--agagggcagctttcatgtagaaattttacctcctacttttaagaaaaaggaaaatcaaagtgc------------------------------------------------------------------------------------ttttcttgcatctgctgtttttcaagtgtctttaactc-aaaaaaatcaatatgccaaagtggcatgtttgagggcatctggctctgaattccttcaggaaagatagaaagcaaaagaaaaatgataggtttaaaactaaaaatagcagggcacg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4506947 275 - 9219162 ttcccttgactcaacttctcatcctgtgtgatgagactgttactttccttcttgtat--agagggcagctttcatgtagaaattttacctcctacttttaagaaaaaggaaaatcaaagtgc------------------------------------------------------------------------------------ttttcttgcatctgctgtttttcaagtgtctttaactcaaaaaaaatcaatatgccaaagtggcatgtttgggggcatctggctctgaattccttcaggaaagatagaaagcaaaagaaaaatgataggtttaaaactaaaaatagcagggcgca i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79033751 274 + 135778131 ttcccctgactcagcttctcattctgggtgatgagactgttactttccttcttgtgt--agagggcagctttcatgtagaaattttacctcccaattttaagaaaaaggaaaatcaaagtgc------------------------------------------------------------------------------------tttacttgcatctgctgtttttcaagtgtctttaactc-aaacaaatcaatatgccaaagtggcatgtttgggggcatctggctctgaattccttcaggaaagatagaaagcaaaagcaaaatgataggtttaaaactaaaaatagcagggtgcg i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6032725 274 + 8656713 ttcccttgactcaacttctcatcctgggtgatgagactgttactttccttcttgtat--agagggcagctttcatgtagaaattttaccccctacttttaagaaaaaggaaaatcaaagtgc------------------------------------------------------------------------------------ttttcttgcatctgctgttttacaactgtctttaactc-aaaaaaatcaatatgccaaagtggcatgtttgggggcatctcgttctgaattccttcaggaaagatagaaagcaaaagcagaatgataggtttaaaactaaaaatagcagggcacg i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e nomLeu3.chr7b 90491342 0 - 115148730 C e panTro5.chr4 135099765 1 + 194502333 I a score=7180111.000000 s hg38.chr9_KI270719v1_random 76193 2464 + 176845 gtggctcacgcctataatcccagcactttgggagactgaggtgggcagatcatgaagtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctctactaaa---aatacaaaaaattagccaggcatggtggtgggcacctgtaatgccagctactcagaaggctgaggcaggagaatggcttgaacccaggaggcagaggttgcagtgagccaagatcatcgcattgcactccagcctgggcaacagagccagactctgtctcaaaaaaaaaaaaaaaaaaa-----------------------aagaaaaaaa-----------tatatatatgcacacataaccacattacatataaatggtctaaatataccaatttaaaagcagattggatcaataaaacaagatctaagttattactgtctagaagaaattcaAGAATATcctaataaaagatatctatgtaaaaacaatagctggcatcat-------acttaatgaagaaaaatcagtttatttccccc-tatttcaggaacaagatgagtccattaactcttagcactttgttttaacattccactagacgttctaccaagtaaaatagacaaaaaacataaacaaaagaattacagatgggaaaggaaaatgtagattggttttatttatagacggcatgtctatgtagaaagtccactgaaatctacaaaaacactgctggctataataagtgagttagcaacataaaaaagaaaaaaa--gcaacatattaaactaatatttccatataccagcaatgaacaataaaaaattaaaataaaagtactattaataatatcatgaaaaatgtagaagaattaggaattaatctatcaaatgatgtgag--tctggtacactaaaactcaaaacactgcagaaagttaaagaagacttaaataaatggaaagatgtaatatgaatatgggttagaaaattcacatggtaaaatgtgattatccctaaatatagattcaatacaatcccaattaaaatattattaggcattgttt-ataggaatttacacactaattttaaaac-------------------------------------t-----t---------------------------------cagtagaaatgcaaagagtctaaaatagccaaaataattcttaaaaataagaatatttttgaaggattagcacaatctaatgccaaagcttataagg-------------ctacagtaatgaaaatagtgtgatattggcataaagatagacagaaatgtcattggaagataatagaaaattcagaaatatatgtacagaattttggtaaattggtgttctccaaagatacaaaggtaattcagtaaataaaagatagcccttcaacaaattctgctggaacaattagatgctcatatgcaaaaagtagaactttaacacgtaactcatgatacaaaaattaatttagtacagatcatatgcctaaatgtaaaatgtaaaaacaaagtgaaaaaaa----------------ggaagaaaaattacgtataggagaaaatatagaaaagtctttgacctca---------atactacttagacatgacacaaacaccaggtttcatcaaagtagaaattgacaactcgagttcatcaaaatgtaaaacatatgttcctcaggaaacactgtaaaacaaatagaaatataagacactactgagaacaatatttgcaaaatatatgtctggc-aaaaaagttgtgtccagaaaatataagaactctcaaaacttgataataaatgtagtaactctaataaaagtaggcaaatggcttaaatgaatacttcttccctaaagaacatatgtagatagaaagtaaacacatggaaagatcctcaatatcattagtcattagggaattgatctgtgtctgtcaaaaatgggttgggtacagttgctcaagcatgtaatcccagcactttggaaggtcaaggcagcagggtttcttgaccccaggagttagagagcagcctgggcaacgtagtgagatcctgtctctacaaaaaagaaaaagacatggcatggtgtctctatttagctaggcatggtgacacatgcctgtagtaccggctactcggaagctgaggtgggagaatcacttgagcccaggaggtggagcctgcagtgaactatggttgtgccaatgcactccagcctgcgtgacagagcaagaacccatctcaaaaaagaaaaaaaGAggccaggcacagtggctcacacctgtaatcacagcactctgggaggtcaaggtgggtggatcacctgaggtcaagagatcgagaccagcctgaccaacatggggaaaccccatctctactaaaaatacaaaaattagctgggcatggtgatgtgcgcctat-atcccagctacttgggaggctgaggcaggagaactgtttgaacccaggaggtgtagattgcagtgagccgagattgtgccattgcacattgcactccagcctgggcaacaagagtgaaacttcatctcaaaaaaaaaaaaaaaa--aaagaaagaaagaaag s panTro5.chr4 135099766 2475 + 194502333 gtggctcatgcctgtaatcccagcattttgggaggccgaggtgggcagatcatgaggtcaggagattgagaccatcctgggcaacatgatgaaaccccgtatctactaaa---aatacataca-ttagctgggtgtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggacaattgcttgaacccgggaggcagaggttgcagtgagctgagatggcaccactgcactccagcctggt--acaaagctagactccgtctcaaaaaaaaaaaaaaaaaaagaaagaaagaaagaaaaagaaaaaagaaaaaaaatgtatatatatatatatatGCACACataaccacattacatataaatggtctaaatataccaatttaaaagcagattggatcaataaaacaagatctaagttattactgtctggaagaaattcaAGAATATcctaataaaggatatctatgtaaaaacaatagctggcatcatgaagatgaagaaatgaagaaaaatcagtttatttccccc-tatttcaggaacaagatgagtccgttaactcctagcactttgttttaacattccactagacgttctaccaagtacaacagacaaaaaacataaacaaaagaattccagacgggaaaggaaaacgtaaattggttttatttatagacggcatgtctatgtagaaagtccactgaaatctacaaaaacactgctggctataataagtgagttagcaacataaaaaagaaaaaaa--gcaacatattaaactaatacttccatataccagcaatgaacaataaaaaattaaaataaaagtactattaataatatcatgaaaactgtagaagaattaggaattaatctatcaaatgatgtgagagtctggtacactaaaactcaaaacactgcagaaagttaaagaagacttaaataaatggagagatatgatatgaatatgggttagaaaattcacatggtaaaatgtgattatgcctaaatatagattcaatacaatcccaattaaaatattattaggcattgttttataggaatttacacactaattttaaaac-------------------------------------t-----t---------------------------------cagtagaaatgcaaagagtctaaaatagccaaaataattcttaaaaataagaatatttttgaaggattagcacaatctaatgccaaagcttataagg-------------ctacagtaatgaaaatagtgtgatattggcataaagatagacagaaatgtcattggcagataatagaaaattcagaaatatatgtacagaattttggtaaattggtgttctccaaagatacaaacgtaattcagtaaataaaagatagcccttcaacaaattctgctggaacagttagatactcatatgcaaaaagtagaactttgacacgtaactcatgatacaaaaatgaatttagtacagatcatatgcctaaatgtaaaatgtaaaaacaaagtgaaaaaaaaaa-------------gtaagaaaaattacgtataggagaaaatatagaaaagtctttgacctcaggctaataaatactacttagacatgacacaaacaccatgtttcatcaaagtagaaattgacaactcgagttcatcaaaatgtaaaacatatgttcctcagaaaacactgtaaaacaaatagaaatataagacactactgagaacaatatttgcaaaatatatgtctggc-aaaaaagttgtgtccagaaaatataagaactctcaaaacttgataataaatctagcaactctaataaaagtaggcaaatgacttaaatgaatacttcttctctaaagaacatatgtagatagaaagtaaacacatggaaagatcctcaatatcattagtcattagggaattaatctgtgtctgtcaaaaatggtttgggtacagttgctcaagcctgtaatcccagcactttggaaggtcaaggcagcagggtttcttgaccccaggagttagagagcagcctaggcaacatagtgagatcctgtctctaccaaaaagaaagagacatggcttggtgtctctatttagctaggcatggtggcacatgcctgtagtaccagctactgggaagctgaggtgagagaatcacttgagcccaggaggtggagcctgcagtgaactatggttgtgccaacgcactccagcctgcgtgacagagcaagaacccatctcaaaaaagaacaaaaGAggccaggcgtggtggctcacacctgtaatcgcagcactctgggaggtcaag------------------------agatcgagaccagcctgaccaacatggtgaaaccccatctctactgaaaatacaaaaattagcggggcatagtgatgcacgcctat-atcccagctacttgggaggctgaggcaggagaactgtttgaatccgggaggtgtagattgcagtgagccgagatcacgccattgcac-------tccagcctgggcaacaagagtgaaacttcgtctcaaaaaaaaaaaaaaaa-------------gaaag i panTro5.chr4 I 1 C 0 s gorGor5.CYUI01000801v1 50588 2460 + 95358 gtggctcacgcctataatcccagcactttgggagactgaagtgggcagatcatgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctctactaaa---aacacaaaaaattagccaggcatggtggcgggcacctgtaatgccagctactcagaaggctgaggcaggagaatggcttgaacccaggaggcagaggttgcagtgagccaagatcattgcgttgcactccagcctgggcaacagagccagactctgtctcaaaaaaaaaaaaaaaga-------------------------aataaataaa-----------tatatatatgcacacataaccacattacatataaatggtctaaatataccaatttaaaagcagattggatcaataaaacaagatctaagttattactgtctagaagaaattcaacaatatcctaataaaacatatctatgtaaaaacaatagctggcatcat-------acttaatgaagaaaaatcagtttatttccccc-tatttcaggaacaagatgagtccactaactcttagcactttgttttaacattccactagacgttctaccaagtaaaatagacaagaaacataaacaaaagaattacagacgggaaaggaaaatgtagattggttttatttatagacggcatgtctatgtagaaagtccactgaaatctacaaaaacactgctggctataataagtgagttagcaacataaaaaagaaaaaaa--gcaacatattaaactaatatttccatataccagcaatgaacaataaaaaattaaaataaaagtactattaataatatcatgaaaaatgtagaagaattaggaattaatctatcaaatgatgtgagagtctggtacactaaaactcaaagcactgcagaaagttaaagaagacttaaataaatggaaagatgtaatatgaatatgggttagaaaattcacatggtaaaatgtgattatccctaaatatagattcaatacaatcccaattaaaatattattaggcattgttttataggaatttacacactaattttaaaac-------------------------------------t-----t---------------------------------cagtagaaatgcaaagagtctaaaatagccaaaataattcttaaaaataagaatatttttgaaggattagcacaatctaataccaaagcttataagg-------------ctacagtaatgaaaatagtgtgatattggcataaagatagacagaaatgtcattggaagataatagaaaattcagaaatatatgtacagaattttggtaaattggtgttctccaaagatacaaaggtaattcagtaaataaaagatagcccttcaacaaattctgctggaacaattagatactcacatgcaaaaagtagaactttaacatgtaactcatgataaaaaaattaatttagtacagatcatatgcctaaatgtaaaatgtaaaaacaaagtgaaaaaaa----------------ggaagaaaaattacgtataggagaaaatatagaaaagtctttgacctca---------atactacttagacatgacacaaacaccatgtttcatcaaagtagaaattgacaacttgagttcatcaaaatgtaaaacatatgttcctcaggaaacactgtaaaacaaatagaaatataagacactactgagaacaatatttgcaaaatatatgtctggc-aaaaaagttgtgtccagaaaatataagaactctcaaaacttgataataaatctagcaactctaataaaagtaggcaaatgacttaaatgaatacttcttctctaaagaacatatgtagatagaaagtaaacacatggaaagatcctcaatatcattagtcattagggaattaatctgtgtctgtcaaaaatgggttgggtacagttgctcaagcctgtaatcccagcactttggaaggtcaaggcagcagggtttcttgaccccaggagttagagagcagcctgggcaacatagtgagatcctgtctctacaaaaaagaaaaagacatggcatggtgtctctatttagctaggcatggtggcacatgcctgtagtaccagctactcggaagctgaggtgggagaatcacttgagtccaggaggtggagcctgcagtgaactatggttgtgccgatgcactccagcctgcgtgacagagcaagaacccatctcaaaaaagaaaaaaaGAggccaggcgcagtggctcacacctgtaattgcagcactctgggaggtcaaggtgggtggatcacctgaggtcaagagatccagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcatggtgatgcgcgtctat-atcccagctacttgggaggctgaggcaggagaactgtttgaacccgggaggtgtagattgcagtgagccgagattgtgccattgcac-------tccagcctgggcaacaagagtgaaacttcgtctcaaaaaaaaaaaaaaaaaaaaagaaagaaagaaag i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131444421 2534 + 190429646 gaggcttatgcctgtaatcccagcactttgggaggctgaagtgggcggatcatgaggtcaggagtttgagaccagcctggctaacatagtgaaaccccatctctattaaa---aatacaaaaaattagccaggtatggtggcagacacctgtaatgccagctactcggaaggctgaggcaggaaaatggcttgaacctaggaggcagaggttgcagtgagccaagatcacgacattgcactccagcctgggcaacagagcaagactctgtctcaaaaaaagaaaaactaa-------------------------actaaaaata-----------------------tacataaccacattacatataaatggtctaaatataccagtgtaacaacagattggatcaataaaacaagatgtaaatacttactgtctagaagaaatgcaAGAATat-ctaataaaggatatctatgtagaaacaatagctggcatcag-------acttaatgattaaaaagtagtttatttccccc-tatttcaggaacaagacgagttcgttaactcttagcacttcgtttcaacatgccactagatattctaccaagtacaatagacaaaaaacataaacaaaataattccagacaggaaaggaaaacataaattggttttatttatagacggcatgtctatgtagcaagtccaccaaaatctacaaaaacactgctggctataataagtgagttagcaacataaaaaggaaaaaaagcgcaacatattaaactaatatttccatagaccagcaatgaacaataaaaaat-----taaaagcactattaatagtatcatcaaaaatgtagaagaattaggaactaatctattaaatgatgtgagagtctggtacactaaaactcaaaatactgcagaaagttaaagaagacctaaataaatggagagatgtaatatgtatatgggttagaaaatttacatggtaaaatgtgattatccctaattatagattcaatataatcccaattaaaatattattaggc---gttttatagaaattttcacactaattttaaaatgtgaaatgcagaaatgcagtaaaattacacgc-----taatttt------aaaatgtaaaatgcagtcaaatgttaaaagtagaaaggcaaagagtctaaaatagccaaag-aattcttaaaaataagaata-ttttgagggattagcacaatctaataccaaagcttacagcaattaaataaatacctacagtaattaaaatagtgtgatattggcataaagatagacagaaaggtcattggaagaggatagaaaattcagaaatatgcctacagaattttggtaaattgctgttctccgaagatacaaaggtaattcagtgaataaaggatagcccttcaacaaattctactggaacaattcaatgctcatatgcaaaaagcagaactttaacatgtaactcattatacaaaaattaatttagtacagatcatatgcctaaatgtgaaatgtaaaaccaaagtaaaaaaaaaaaaaaaaaaaaaagaagaagaaaaagtacatataggagaaaacatggaaaagtctttgacctcaggttagtaaacactacttagacatgatacaaacaccatgtttcatcaaagtagaaattgacaactggagttcatcaaaatttaaaacatccgttcctcagaaaacactgtaaaacaaatagaaatataagacactaatgaggacaatatttgcaaaatatgtatctggc-aaaaaagttgtgtccagaaaatataagaactctcaaaacttggtaataaatctaagacctgtaataaaagtaggcaaataacttaaattaatatttct---ctaaagaacacatatagatagaaagtaaatacatggaaagatcctcaatatcattaatcattagggaattaatctgtgtctgtcaagaatgggttgggaacggtggctcaagcctgtaatcccagccctttgaaaggccaaggcagcaggatttcttgagcccaggagttagagagcagcctgggcaacatagtgagatcctgtctctacaaata--aaggagacatgtcatggtgtctctatttagctgggcatggtggcatatgcctgtaataccagctactcagaagctgagatgggagaatcacttaggcccaggaggtggagccttcagtgaactatggttgtgccaatgtgctccagcctgcatgacagagcaagaacccatctcaaaaaagta-aaaaGAggtcaggtgcggtggctcacccttataatcgcggcactctgggaggtcaaggtgggtggatcacctgaggtcaagagatcgagaccagcctgatcaacatggtgaaaccccatctctactaaaaatataaaaattagctgggcatggtggcacgcgcctgtaatcccagccacttgggaggcggaagcaggagaattgtttgaatctgggaggtggagattgcagtgagccgagatcgtggcattgcac-------tccagcctgggcatcaagagagaaccttagtctcaaaaaaaaaaaaaaaa--aaaaaaaaaaaggaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130963423 2534 + 189454096 gaggcttatgcctgtaatcccagcactttgggaggctgaagtgggcggatcacgaggtcaggagtttgagaccagcctggctaacatagtgaaaccccatctctattaaa---aatacaaaaaattagccaggtgtggtggcagacacctgtaatgccagctactcggaaggctgaggcaggaaaatggcttgaacctaggaggcagaggttgcagtgagccaagatcacgacattgcactccagcctgggcaacagagcaagactctgtctcaaaaaaagaaaaactaa-------------------------actaaaaata-----------------------tacataaccacattacatataaatggtctaaatataccagtgtaacaacagattggatcaataaaacaagatgtaaatacttactgtctagaagaaatgcaAGAATat-ctaataaaggatatctatgtagaaacaatagctggcatcag-------acttaatgattaaaaagtagtttatttccccc-tatttcaggaacaagacgagttcgttaactcttagcacttcgtttcaacatgccactagatattctaccaagtacaatagacaaaaaacataaacaaaataattccagacaggaaaggaaaacataaattggttttatttatagacggcatgtctatgtagcaagtccaccaaaatctacaaaaacactgctggctataataagtgagttagcaacataaaaaggaaaaaaaaagcaacatattaaactaatatttccatagaccagcaatgaacaataaaaaat-----taaaagcactattaatagtatcatcaaaaatgtagaagaattaggaactaatctattaaatgatgtgagagtctggtacactaaaactcaaaatactgcagaaagttaaagaagacctaaataaatggagagatgtaatatgtatatgggttagaaaatttacatggtaaaatgtgattatccctaattatagattcaatataatcccaattaaaatattattaggc---attttatagaaatttacacactaattttaaaatgtgaaatgcagaaatgcaaTAAAATTACACGCTAATTT-----T------AAAATGTAAAATGCAGTCAAATGTTAAAAGtagaaatgcaaagagtctaaaatagccaaag-aattcttaaaaataagaata-ttttgagggattagcacaatctaataccaaagcttacagcaattaaataaatacctacagtaattaaaatagtgtgatattggcataaagatagacagaaaggtcattggaagaggatagaaaattcagaaatatgcctacagaattttggtaaattgctgttctccgaagatacaaaggtaattcagtgaataaaggatagcccttcaacaaattctactggaacaattcgatgctcatatgcaaaaagcagaactttaacatgtaactcattatacaaaaattaatttagtacagatcatatgcctaaatgtgaaatgtaaaaccaaagtaaaaaaaaaaaaaaaaaaagaagaaaaaaaaaaagtacatataggagaaaacatggaaaagtctttgacctcaggttagtaaacactacttagacatgatacaaacaccatgtttcatcaaagtagaaattgacaactggagttcatcaaaatttaaaacatccgttcctcagaaaacactgtaaaacaaatagaaatataagacactaatgaggacaatatttgcaaaatatgtatctggc-aaaaaagttgtgtccagaaaatataagaactctcaaaacttggtaataaatctaagacctgtaataaaagtaggcaaataacttaaattaatatttct---ctaaagaacatatatagatagaaagtaaatacatggaaagatcctcaatatcattagtcattagggaattaatctgtgtctgtcaagaatgggttgggaatggtggctcaagcctgtaatcccagccctttggaaggccaaggcagcaggatttcttgagcccaggagttagagagcagcctgggcaacatagtgagatcctgtctctacaaata--aaggagacatgtcatggtgtctctatttagctgggcatggtggcatatgcctgtaataccagctactcagaagctgagatgggagaatcacttaggcccaggaggtggagccttcagtgaactatggttgtgccaatgtgctccagcctgcatgacagagcaagaacccatctcaaaaaagta-aaaaGAggtcaggtgcggtggctcacccttataatcgcggcactctgggaggtcaaggtgggtggatcacctgaggtcaagagatcgagaccagcctgatcaacatggtgaaaccccatctctactaaaaatataaaaattagctgggcatggtggcacgcgcctgtaatcccagccacttgggaggcggaagcaggagaattgtttgaatctgggaggtggagattgcagtgagccgagatcgtgccattgcac-------tccagcctgggcatcaagagagaaccttagtctcaaaaaaaaaaaaaaaa--aaaaaaaaaaaggaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34955197 2527 - 40319822 gaggcttatgcctgtaatcccagcactttggaaggctgaagtgggcggatcacgaggtcaggagtttgagaccagcctggctaacatagtgaaaccccatctctattaaa---aatacaaaaaattagccaggtgtggtggcagacacctgtaatgccagctactcggaaggctgaggcaggaaaatgtcttgaacctaggaggcagaggttgcagtgagccaagatcacgacattgcactccagcctgggcaacagagcaagactctgtctcaaaaaaagaaaaactaa-------------------------actaaaaata-----------------------tacataaccacattacatataaatggtctaaatataccagtgtaacaacagattggatcaataaaacaagatgtaaatacttactgtctagaagaaatgcaAGAATat-ctaataaaggatatctatgtagaaacaatagctggcatcag-------acttaatgattaaaaagtagtttatttcccct-tatttcaggaacaagacgagttcgttaactcttagcacttcgtttcaacatgccactagatattctaccaagtacaatagacaaaaaacataaacaaaataattccagacaggaaaggaaaacataaattggttttatttatagacggcatgtctatgtagcaagtccaccaaaatctacaaaaacactgctggctataataaatgagttagcaacataaaaaggaaaaaaaaagcaacatattaaactaatatttccatagaccagcaatgaacaataaaaaat-----taaaagcactattaatagtatcatcaaaaatgtagaagaattaggaatgaatctattaaatgatgtgagagtctggtacactaaaactcaaaatactgcagaaagttaaagaagacctaaataaatggagagatgtaatatgtatatgggttagaaaatttacatggtaaaatgtgattatccctaattatagattcaatataatcccaattaaaatattattaggc---attttatagaaatttacacactaattttaaaatgtgaaatgcagaaatgcagtaaaattatacgctaattt-----t------aaaatgtaaaatgcagtcaaatgttaaaagtagaaatgcaaagagtctaaaatagccaaag-aattcttaaaaataagaata-ttttgagggattagcacaatctaataccaaagcttacagcaattaaataaatacctacagtaattaaaatagtgtgatattggcataaagatagacagaaaggtcattggaagaggatagaaaattcagaaatatgcctacagaattttggtaaattgctgttctccgaagatacaaaggtaattcagtgaataaaggatagcccttcaacaaattctactggaacaattcgatgctcatatgcaaaaagcagaactttaacatgtaactcattatacaaaaattaatttagtacagatcatatgcctaaatgtgaaatgtaaaaccaaagtaaaaaaaaaaaaa-------aagaagaagaaaaagtacatataggagaaaacatggaaaagtctttgacctcaggttagtaaacactacttagacatgatacaaacaccatgtttcatcaaagtagaaattgacaactggagttcatcaaaatttaaaacatccgttcctcagaaaacactgtaaaacaaatagaaatataagacactaatgaggacaatatttgcaaaatatgtatctggc-aaaaaagttgtgtccagaaaatataagaactctcaaaacttggtaataaatctaagacctgtaataaaagtaggcaaataacttaaattaatatttct---ctaaagaacatatatagatagaaagtaaatacatggaaagatcctcaatatcattagtcattagggaattaatctgtgtctgtcaagaatgggttgggaacggtggctcaagcctgtaatcccagccctttggaaggccaaggcagcaggatttcttgagcccaggagttagagagcagcctgggcaacatagtgagatcctgtctctacaaata--aaggagacatgtcatggtgtctctatttagctgggcatggtggcatatgcctgtaataccagctactcagaagctgagatgggagaatcacttaggcccaggaggtggagccttcagtgaactatggttgtgccaatgtgctccagcctgcatgacagagcaagaacccatctcaaaaaagta-aaaaGAggtcaggtgcggtggctcacccttataatcgcggcactctgggaggtcaaggtgggtggatcacctgaggtcaagagatcgagaccagcctgatcaacatggtgaaaccccatctctactaaaaatataaaaattagctgggcatggtggcacgcgcctgtaatcccagccacttgggaggcggaagcaggagaattgtttgaatctgagaggtggagattgcagtgagccgagatcgtgccattgcac-------tccagcctgggcatcaagagagaaccttagtctcaaaaaaaaaaaacaaa--aaaaaaaaaaaaaaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4507222 2525 - 9219162 gaggcttatgcctgtaatcccagcactttgggaggctgaagtgggcggatcacgaggtcaggagtttgagaccagcctggctaacatagtgaaacctcatctctactaaa---aatacaaaaaattagccaggtgtggtggcagacacctgtaatgccagctactcagaaggctgaggcaggaaaatggcttgaacctaggaggcagaggttgcagtgagccaagatcacgacattgcactccagcctgggcaacagagcaagactctgtctcaaaaaaagaaaaactaa-------------------------actaaaaata-----------------------tacataactacattacatataaatggtctaaatataccaatgtaacaacagattggatcaataaaacaagatgtaaatacttactgtctagaagaaatgcaAGAATat-ctaataaaggatatctatgtagaaacaatagctggcattag-------acttaatgattaaaaagtagtttatttccccc--atttcaggaacaagacgagttcgttaactcttagcactttatttcaacatgccactagatattctaccaagtacaatagacaaaaaacataaacaaaataattccagacaggaaaggaaaatataaattggttttatttatagacggcatgtctatgtagcaagtccaccaaaatctacaaaaacactgctggctataataagtgagttagcaacataaaaaggaaaaaaaaagcaacatattgaactaatatttccatataccagcaatgaacaataaaaaat-----taaaagcactattaatagtatcatcaaaaatgtagaagaattaggaactaatctatcaaatgatgtgagagtctggtacactaaaactcaaaatactgcagaaagttaaagaagacctaaataaatggagagatgtaatatgtatatgggttagaaaatttacatggtaaaatgtgattatccctaattatagattcaatataatcccaattaaaatattattaggc---gttttatagaaatttacacactaattttaaaatgtaaaattcagaaatgcagtaaaattacacgctaattt-----t------aaaatgtaaaatgcagtcaaatgttaaaagtagaaatgcaaagagtctaaaatagccaaag-aattcttaaaaataagaata-ttttgagggattagcacaatctaataccaaagcttacagcaattaaataaatacctacagtaattaaaatagtgtgatattggcataaagatagacagaaaggtcattggaagaggatagaaaattcagaaatatgcctacagaattttggtaaattgctgttctccgaagatacaaaggtaattcagtgaataaaggatagcccttcaacaaattctgctggaacaattcgatgctcatacgcaaaaagcagaactttaacatgtaactcattatacaaaaattaatttagtgcagatcatatgcctaaatgtgagatgtaaaaccaaaggaaaaaaaaaaaag-------aagaagaagaaaaagtacatataggagaaaacatggaaaagtctttgacctcaggttagtaaacactacttagacatgatacaaacaccatgtttcatcaaagtagaaattgacaactggagttcatcaaaatttaaaacatccattcctcagaaaacactgtaaaacaaatagaaatataagacactaatgaggacaatatttgcaaaatatgtatctggcaaaaaaagttgtgtccagaaaatataagaactctcaaaacttggtaataaatctaagacctgtaataaaagtaggcaaataacttaaattaatatttct---ctaaagaacatatatagatagagagtaaatacatggaaagatcctcaatatcattagtcattagggaattaatctgtgtctgtcaagaatgggttgggcacggtggctcaagcctataatcccagccctttggaaggccaaggaagcaggatttcttgggcccaggagttagagagcagcctggacaacatagtgagatcctgtctctacaaata--aaggagacatgtcatggtgtctctatttagctgggcatggtggcacatgtctgtaataccagctactcagaagctgaaatgggagaatcacttaggcccaggaggtggagccttcagtgaactatggttgtgccaatgtgctccagcctgcatgacagagcaagaacccatctcaaaaaagta-aaaaGAggtcaggtgtagtggctcacccttataatcgcggcactctgggaggtcaaggtgggtggatcacctgaggtcaagagatcgagaccagcctgatcaacatggtgaaaccccctctctactaaaaatataaaaattagctgggcatggtggcacacgcctgtaatcccagccacttgggaggcggaagcaggagaattgtttgaatctgggaggtggagattgcagtgagccgagatcgtgccattgcac-------tccagcctgggcatcaagagagaaccttagtctcaaaaaaaaaaaaaaaa--aaggaaagaaaaaa-- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79034025 2518 + 135778131 gaggcttatgcctgtaatcccagcactttgggaggctgaggttggcggatcacgagatcaggagtttgagaccagcctgactaacatagtgaaaccccgtctctattaaaaataatacaaaaaattagccaggtgtggtggcggacacctgtaatgccagctactcagaaggctgaggcaggagaatggcttgaacctaggaggcagaggttgcagtgagccaagatcatgacattgcactccagcctgggcaacagagcaagactctgtctcaaaaaaagaaaaactaa-------------------------actaaaaata-----------------------tacataaccacattacatataaatgatctaaatataccaatgtagcaacaaattgggtcaataaaacaagatgtaaatacttactgtctagaagaaatgcaAGAATat-ctaataaaggatatctatgtagaaacaatagctggcatcat-------acttaatgaataaaaagtagtttatttccccc--atttcaggaacaagatgagttcgttaactcttagcactttgtttcaacatgccactagatattctaccaagtacaatagacaaaaaacataaacaaaataattccagacaggaaaggaaaacataaattggtttttttaatagatagcatgtctatgtaacaagtccaccaaaatctacaaaaacactgctggctataataagtgagttagcaacataaaaaagaaaaaaa------------aaactaatatttccatataccatcaatgaacaataaaaaat-----taaaagcactattaatagtatcatcaaaaatgtagaagaattaggaactaatctattaaatgatgtgagagtctggtacactaaaactcaaaatactgcagaaagttaaagaagacctaaataaatggagagatgtaatatgcatatgggttagaaaatttacatggtaaaatgtgattatccctaattatagattcaatacaatcccaactaaaatattattaggc---gttttatagaaatttacacactaattttaaaatgtaaaatgcagaaatgcaGTAAAATTACACG------C-----TAATTTTAAAATGTAAAATGCAGTCAAATGTTAAAAGtagaaatgcaaagtgtctaaaatagccaaag-aattcttaaaaataagaaga-ttttgagggattagcacaatctaataccaaagcttacagcaattaaataaatacctacagtaattaaaatagtgtgatattggcataaagatagacagaaaggtcattggaagaggatagaaaattcagaaatatgcctacagaattttggtaaattgctgttctccaaagatacaaaggtaattcagtgaataaaggatagcccttcaacaaattctgctggaacaattcgatgctcatatgcaaaaagcagaactgtaacatgtaactcattatacaaaaattaatgtagtacagatcatatgcctaaatgtgaaatgtaaaaccaaagtgaaaaaaaaaaaaaaaga--aagaagaagaaaaagtacatataggagaaaacatggaaaagtctttgacctcaggttagtaaacactacttagacatgatacgaacaccatgtttcatcaaagtacaaattgacaactggagttcatcaaaatttaaaacatccgttcctcagaaaacactgtaaaacaaatagaaatataagacactaatgaggacaatatttgcaaaatatgtatctggc-aaaaaagttgtgcccagaaaatataagaactctcaaaacttggtaataaatctaagacctataataaaagtaggcaaataacttaaattaatatttct---ctaaagaacatatatagatagaaagtaaatacatggaaagatcctcaatatcattagtcattagggaattaatttgtgtctgtcaagaatggggtgggcacagtggctcaagcctgtaatcccagccctttggaaggccaaggcagcaggatttcttgagcccaggagtaagagagcagcctgggcaacatagtgagatcctgtctctacaaata--aaggagacatgtcatggtgtctctatttagctgggcatggtggcacatgcctgtaataccagctactcagaagctgagatgggagaatcacttaggcccagaaggtggagccttcagtgaactatggttgtgccaatgtgctccagcctgcatgacagagcaagaatccatctcaaaaaagta-aaaaGAggtcaggtgcggtggctcacccctataatcgcggcactctgggaggtcaaggtgggtggatcacctgaggtcaagagatcgagaccagcctgatcaacatggtgaaaccccatccctactaaaaatataaaaattagctgggcatggtggcacgtgcctgtaatcccagccacttgggaggcggaagcaggagaattgtttgaatctaggaggtggagattgcagtgagccgagatcacaccattgcac-------tccagcctgggcatcaagagagaaccttagtctcaaaaaaaaaaaaaaaa--ggaaagaaaaaa---- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6032999 2449 + 8656713 gaggcttatgcctgtaatcccagcactttgggaggctgaggtgggcggatcacgaggtcaggagtttgagaccagcctggctaacatagtgaaaccccgtctctactaaa---aatacaaaaaattagccaggcctggtggcggacacctgtaatgccagctactcggaaggctgaggcaggagaatggcttgaacctaggaggcagaggttgtagtgagccaagatcacgacattgcactccagcctgggcaacacagcaagactttgtctcaaaaaaagaaaaattaa-------------------------actaaaaata-----------------------tacataaccacattacatataaatggtctaaatataccaatataacaacagattggatcaataaaacaagatgtaaatacctactgtttagaagaaatgcaAGAATat-ctaataaaggacatatatgtagaaacaatagctggcatcat-------acttaatgaataaaaagtagtttatttcccccctatttcaggaacaagatgagttcgttaactcttagcactttgtttcaacatgccactaggtattctacaaagtacaatagacaaaaaacgtaaacaaaataattccagacaggaaaggaaaacataaattggttttatttgtagatgacatatctatgtaacaagcccaccaaaatctacaaaaacactgctggctataagaagtgagttagcaacataaaa---aaaaaaaaagcaacatattaaactaatatttccatataccagcaatgaacaataaaaaat-----taaaagcactattaatagtatcatcaaaaatgtagaagaattaggaactaatctatcaaatgatgtgagagtctagtacactaaaactcaaaatactgcagaaagttaaagaagacctaaataaatggagagatgtaatatgcatatgggttagaaaatttacatgataaaatgtgattatccctaattatagattcagtacaattccaattaaaatattattaggc---attttatagaaatttacacactaatt--------------------------------------------t-----t------aaaatgtaaaatgcagtcaaatgttaaaagtagaaatgcaaaaagtctaaaatagccagag-aattcttaaaaataagaata-tttggagggattagcacaatcaaataccaaagcttagagtaattaaataaatacctacagtaattaaaatagtgtgatattggcataaagatagacagaaaggtcattggaagaggatagaaaattcagaaatacgcctccagaattttggtaaattgctgttctccgaagatacacagttaattcagtgaataaaggatagcccttcaacaaattctgct-------ttcgatgctcatatgcaaaaagcagaactttaacatgtaactcattatacaaaaactaatttcgtacagatcatatgcttaaatgtgaaatgtaaaaccaaagtgaaaaaaaaaaaa--------------agaaaaagtacatataggagaaaacatagaaaagtctttgacctcaggttaccaaacactacttagacatgatacaaacaccatgtttcatcaaagtagaaattgacaactggagttcatcaaaatttaaaacatctgttcctcagaaaacactgtaaaacaaatagaaatataagacactaatgaggacaatatttgcaaaatatatgtctggc-aaaaaagttgtgtccagaaaatataagaactctcaaaacttgataataaatctgagacctgcaataaaagtaggcaaatgacttaaatgaatatttct---ctaaagaacatatgtagatagaaagtaaatacatggaaacatcctcaatatcattagtcattagggacttaatctgtgtctgtcaagaatgggttgggcacggtggctcaagcctctaattccagccctttggaaggccaaggcaataggatttcctgagcccaggagttagagagcagcctgagcaacatagtgagatcctgtctctacaaata--aaagagacatgccatggtgtctctatttagctgggcatggtggcacatgcctgtaataccagctactcggaagctgaggtgggagaatcacttaggcccaggaggtggagccttcagtgaactatggttgtgccagtgtgctccagcctgcatgaca-agcaagaacccatctcaaaaaagca-aaaaGAggccaggtgtggtggctcacccctataattgcagcactctgggaagtcaaggtgggtggatcacatgaggtcaagagatcgagaccagcctcatcaacatggtgaaaccccatctctactaaaaatataaaaattagctgggcatggtggcacgcgcctgtaatcccagccacttgggaggcggaagcaggagaattgtttgaacctgggaggtggagattgcagtgagccgagattgcgccattgcac-------tccagcctgggcatcaagagagaattttagtctcaaaaaaaaaggaaag------------------- i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=11285.000000 s hg38.chr9_KI270719v1_random 78657 5 + 176845 aaaaa s panTro5.chr4 135102241 5 + 194502333 aaaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 53048 5 + 95358 aaaaa i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131446955 5 + 190429646 gaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130965957 5 + 189454096 gaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34957724 5 - 40319822 aaaaa i macNem1.NW_012010911v1 C 0 C 0 s colAng1.NW_012114544v1 6035448 5 + 8656713 aaaaa i colAng1.NW_012114544v1 C 0 C 0 s rhiRox1.KN299219v1 8738 5 - 733946 aaaaa i rhiRox1.KN299219v1 N 0 I 2387 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e chlSab2.chr7 79036543 0 + 135778131 C e cerAty1.NW_012000798v1 4509747 0 - 9219162 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=1911.000000 s hg38.chr9_KI270719v1_random 78662 1 + 176845 a s panTro5.chr4 135102246 1 + 194502333 a i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 53053 1 + 95358 a i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131446960 1 + 190429646 a i rheMac8.chr5 C 0 I 1 s macFas5.chr5 130965962 1 + 189454096 a i macFas5.chr5 C 0 I 1 s macNem1.NW_012010911v1 34957729 1 - 40319822 a i macNem1.NW_012010911v1 C 0 I 338 s colAng1.NW_012114544v1 6035453 1 + 8656713 a i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e chlSab2.chr7 79036543 0 + 135778131 C e cerAty1.NW_012000798v1 4509747 0 - 9219162 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=33284.000000 s hg38.chr9_KI270719v1_random 78663 14 + 176845 gaatggctaaagtt s panTro5.chr4 135102247 14 + 194502333 gaatggctaaagtt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 53054 14 + 95358 gaatggctaaagtt i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131446962 14 + 190429646 gaatggttaaagtt i rheMac8.chr5 I 1 C 0 s macFas5.chr5 130965964 14 + 189454096 gaatggttaatgtt i macFas5.chr5 I 1 C 0 s cerAty1.NW_012000798v1 4509747 14 - 9219162 gaatggttaaagtt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79036543 14 + 135778131 gaatggttaaagtt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6035454 14 + 8656713 gaatggctaaagtt i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e macNem1.NW_012010911v1 34957730 338 - 40319822 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=2014279.000000 s hg38.chr9_KI270719v1_random 78677 662 + 176845 aaaaaggctggccatgccaagtgttggcaaaactatagaggacaaccaacatacatgcactgctaatggtaaaggaaattagtacaatgactctggaaaaagccttgtcagtttttaaaatattttgacgtatgcacctatcatatgactgccaatcaatttgtagggaaatgaaagtatatgtacataaaaaacttgtaccaaaacattcacagcac--ttttttatgggagagaggggctaatagtgaagagcatgtaacaatcaaatattcattaacagataaatgaataagcaagctttgatatatccatattttgaaatactaca-agcaataaaagaaatgaaactttcatccatactataaaatagattaatctcaataaatatgctaattaatagaagccagatcaaaagagaaca----gtatgatatcatttatataaaaAGAGGcattagagcctagtagttaagagtgcagcttctggaagcaaaatccttagtatgat--tttggctcattgtctgcagcatttattttatgtgcgctcttgaggtttttacagaaacaatatgcctcagtttactcatctatataatgactatatcgatagtcatctactttataaaatATAGTATTTTATAATGTAATACTTTATAATATATATTT s panTro5.chr4 135102261 668 + 194502333 aaaaaggctggccatgccaagtgttggcaaaactatagaggacaaccaacatacatgcactgctaatggtaatggaaattagtacaatgactctggaaaaaggcttgtcagtttttaaaatattttgacgtatgcacctatcatatgactgccaatcaatttgtagggaaatgaaagtatatgtgcataaaaaacttgtaccaaaacattcgcagcac--ttttttaagggagagaggggctaatagtgaagagcatgtaacaatcaaatattcattaacagataaatgaataagcaagctttgatatatccatattttgaaatactata-agcaataaaagaaatgaaactttcacccatactataaaatagattaatctcaataaatatgctaattaatagaagacagatcaaaagagaacaaatggtatgatatcatttatagaaaaagaggcaTtagagcctagtagttaagagtgcagcttctggaagcaaaatccttagtatgatgttttggctcattgtctgcagcatttattttatgtgcgctcttgaggtttttacagaaacaatattcctcagtttactcatctatataatgactatatcaatagtcatctactttataaaatACAGTATTTTATAATGTAATACTTTATAATATATGTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 53068 663 + 95358 aaaaaggctggccatgccaagtgttggcaaaactatagaggacaaccaacatacatgcactgctaatggtaatggaaattagtacaatgactctggaaaaaggcttgtcagtttttaaaatattttgacatatgcacctatcatatgactgccaatcaatttgtagggaaatgaaagtatatgtacataaaaaacttgtaccaaaacattcacagcac--ttttttatgggagagaggggctaatagtgaagagcatgtaacaatcaaatattcattaacagataaatgaataagcaagctttgatatatccatattttgaaatactaca-agcaataaaagaaatgaaactttcatccatactataaaatagattaatctcaataaatatgctaattaatagaagccagatcaaaagagaaca----atatgatatcatttatataaaaAGAGGcattagagcctagtagttaagagtgcagcttctggaagcaaaatccttagtatgatgttttggctcattgtctgcagcatttattttacgtacgctcttgaggtttttacagaaacaatatgcctcagtttactcatctatataatgactatatcgat-gtcatctactttataaaatATGGTATTTTATAATGCAATACTTTATAATATATATTT i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131446976 664 + 190429646 aaaaaggctggccatgcaaagtgttggcaaaactatagaggacaaccaacacacatgcactgccagtggtaatggaaattagtacaatgactctgg--aagggcttgttagtttttaaaatgttatgaagtatgcacctatcacatgactgccaatcaatttgtagggaaatgaaagtatatgtacataaaaaacttgtaccaaaacattcacagcacttttttttatgggggagaggggctaatagttcagaacatataacaaccaaatattcattaacagataaatgaataagcaagctttgatatatccatattttgaaatactacacagcaataaaataaatgaaactttcatccatactataaaatagatgaatctc---aaatatgctaattaatagacgccagattaaaagagaacaaactgtatgataccatttatataaaGAGAGGcattagagcctagtagttaagagtgcagcttctggaagcaaaatccttaatatgatattttgactcattatctgcaacatttattttttgtgtgatcttgaggtttttatagaaacaatatgcctcagtttactcatctatataatggctgcat--atattcatctactttataaaatatagtattttagaatgtaatactcaataatatatattt i rheMac8.chr5 C 0 I 3 s macFas5.chr5 130965978 666 + 189454096 aaaaaggctggccatgcaaagtgttggcaaaactatagaggacaaccaacacacatgcactgccagtggtaatggaaattagtacaatgactctggaaaaaggcttgttagtttttaaaatgttatgaagtatgcacctatcacatgactgccaatcaatttgtagggaaatgaaagtatatgtacataaaaaacttgtaccaaaacattcacagcacttttttttatgggggagaggggctaatagttcagaacatataacaaccaaatattcattaacagataaatgaataagcaagctttgatatatccatattttgaaatactacacagcaataaaataaatgaaactttcatccatactataaaatagatgaatctc---aaatatgctaattaatagaagccagattaaaagagaacaaactgtatgataccatttatataaaaAGAGGcattagagcctagtagttaagagtgcagcttctggaagcaaaatccttaatatgatattttgactcattatctgcagcatttattttttgtgtgatcttgaggtttttatagaaacaatatgcctcagtttactcatctatataatggctgcat--atattcatctactttataaaatatagtattttagaatgtaatactcaataatatatattt i macFas5.chr5 C 0 I 3 s macNem1.NW_012010911v1 34958068 666 - 40319822 aaaaaggctggccatgcaaagtgttggcaaaactatagaggacaaccaacacacatgcactgccagtggtaatggaaattagtacaatgactctggaaaaaggcttgttagtttttaaaatgttatgaagtatgcacctatcacatgactgccaatcaatttgtagggaaatgaaagtatatgtacataaaaaacttgtaccaaaacattcacagcacttttttttatgggggagaggggctaatagttcagaacatataacaaccaaatattcattaacagataaatgaataagcaagctttgatatatccatattttgaaatactacacagcaataaaataaatgaaactttcatccatactataaaatagatgaatctc---aaatatgctaattaatagaagccagattaaaagagaacaaactgtatgataccatttatataaaaAGAGGcattagagcctagtagttaagagtgcagcttctggaagcaaaatccttaatatgatattttgactcattatctgcagcatttattttttgtgtgatcttgaggtttttatagaaacaatatgcctcagtttactcatctatataatggctgcat--atgttcatctactttataaaatatagtattttagaatgtaatactcaataatatatattt i macNem1.NW_012010911v1 I 338 I 3 s cerAty1.NW_012000798v1 4509761 666 - 9219162 aaaaaggctggccatgcaaagtgttggcaaaactatagaggacaaccaacacacatgcactgccagtggtaatggaaattagtacaatgactctggaaaaaggcttgttagtttttaaagtgttatgaagtatgcacctatcacatgactgccaatcaatttgtagggaaatgaaagtatatgtacataaaaaacttgtaccaaaacattcacagcacttttttttatgggggagaggggctaatagttcagaacatataacaaccaaatattcattaacagataaatgaataagcaagctttgatatatccatattttgaaatactacacagcaataaaataaatgaaactttcatccatactataaaatagatgaatctc---aaatatgctaattaatagaagccagattaaaagagaacaaactgtatgataccatttatataaaaAGAGGcattagagcctagtagttaagagtgcagcttctggaagcaaaatccttaatatgatattttgactcattatctgcagcatttattttttgtgtgatcttgaggtttttatagaaacaatatgcctcagtttactcatctatataacggctgcgt--atattcatctactttataaaatacAGTATTTtagaatgtaatactcaataatatatattt i cerAty1.NW_012000798v1 C 0 I 3 s chlSab2.chr7 79036557 666 + 135778131 aaaaaggctggccatgcaaagtgttggcaaaactatagaggacaaccaacacacatgcactgccagtggtaatggaaattagtacaatgactctggaaaaaggcttgttagtttttaaaaggttatgaaatatgcaccgatcacaagactgccaatcaatttgtagagaaatgaaagtatatgtacataaaaaacttgtaccaaaacattcacagcacttttttttatgggggacagaggctaatagtccagaacatatagcaaccaaatattcattaacagataaatgaataagcaagctttgatatacccatattttgaaatactacacagcaataaaataaatgaaactttcatccatactataaaatagatgaatctc---aaatatgctaattaatagaagccagattaaaagagaacaaactgtatgataccatttatataaaaAGAGGcattagaacctagtagttaagagtgcagcttctggaaacagaatccttagtatgatattttgactcattatctgcagcatttattttatgtgtgatcttgaggttttcatagaaacaatatgcctcagtttactcatctatataatgactgcat--atattcatctactttataaaatATAGTATTTTAGAATGTAATACTCAATAATATATATTT i chlSab2.chr7 C 0 I 15 s colAng1.NW_012114544v1 6035468 662 + 8656713 aaaaaggctggccatgcaaagtgttggcaaaactatagaggacaaccaacacacatgcactgccagtggtaatggaaattagtacaatgactctggaaaaaggcttgttagtttttaaaatgttatgaagtatgcacctatcccatgactgccaatcaatttgtagggaaatggaagtatatgtacat-aaaaacttgtaccaaaacattcacagcacttttttttatgggggagaggggctaatagttcagaacatataacaaccaaatattcattaacagataaatgaataagcaagctttgatatatccatattttgaaatactacacagcaacaaaataaatgaaactttcatccatactataaaatagatgaatctt---aaatatgctaattaatagaagccagattaaaagagaacaaactatatgataccatttatataaaaAGAGGCATTGGagcctagtagttaagagtgcagcttctggaagcaaaatccttagtatgatattttgactcattatgtgcagcatttattttatgtgtgatcttgaggtttttatagaagccatatgcctcagtttactcatctgtataat---TATAT--ATATTCATCTACTTTATAAAATATAGTATTTTAGAATGTAATACTCAATAATATATATTT i colAng1.NW_012114544v1 C 0 I 3 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=29216.000000 s hg38.chr9_KI270719v1_random 79339 23 + 176845 GATAT---ATATTTTAAAATGTCTTT s panTro5.chr4 135102929 26 + 194502333 GATATTATATATTTTAAAATGTCTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 53731 23 + 95358 GATAT---ATATTTTAAAATGTCTTT i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131447643 20 + 190429646 attat---attttataaaatgtc--- i rheMac8.chr5 I 3 C 0 s macFas5.chr5 130966647 20 + 189454096 attat---attttataaaatgtc--- i macFas5.chr5 I 3 C 0 s macNem1.NW_012010911v1 34958737 20 - 40319822 attat---attttataaaatgtc--- i macNem1.NW_012010911v1 I 3 C 0 s cerAty1.NW_012000798v1 4510430 20 - 9219162 attat---attttataaaatgtc--- i cerAty1.NW_012000798v1 I 3 C 0 s colAng1.NW_012114544v1 6036133 20 + 8656713 ATTAT---ATTTTACAAAATGTC--- i colAng1.NW_012114544v1 I 3 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e chlSab2.chr7 79037223 15 + 135778131 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=9828.000000 s hg38.chr9_KI270719v1_random 79362 3 + 176845 ATT s panTro5.chr4 135102955 3 + 194502333 ATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 53754 3 + 95358 ATT i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131447663 3 + 190429646 att i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130966667 3 + 189454096 att i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34958757 3 - 40319822 att i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4510450 3 - 9219162 att i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79037238 3 + 135778131 ATT i chlSab2.chr7 I 15 C 0 s colAng1.NW_012114544v1 6036153 3 + 8656713 ATT i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2793902 19234 - 3013352 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=613862.000000 s hg38.chr9_KI270719v1_random 79365 182 + 176845 ATATTTTATAAAGTATAAATAATATAAAATAATGTCTATAGTTGTTGAC-TTATAAAAATAAAGATTAAATAAACAAAAATATGTGAAGCACTAGTTTACTACCTAGAAAATGGTACATTTTAAATATTTTCATGATTGTAATAAATAAATGTATCCTTATAATGTTATTTTATTAATAATAA s panTro5.chr4 135102958 179 + 194502333 ATATTTTATAAAGTATAAATAATATAAAATAATATCTATAGTTG---AC-TTATAAAAATAAAGACTAAATGAACAAAAATACATGAAGCACTAGTTTACTACCTAGAAAATGGTACATTCTAAATATTTTCATGATTGTAATACATAAATGTATCCTTATAAGGTTATTTTATTAATAATAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 53757 180 + 95358 ATATTTTATAAAGTATAAATAATATAAAATAATGTCTATAGTTGTTGAC-TTATAAAAATAAAGATTAAATGAACAAAAATATGTGAAGCACTAGTTTACTACCTAGAAAATGGTACATTCTAAATATTTTCATGATTGTAATAAATAAATGTATCCTTATAATGTTATTTTATTAATA--AA i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131447666 176 + 190429646 atattttataaagtataaataacataaaacaatatatataGTTGTTGACTTTGTAAAAATAAAGATTAAATAAACAAAAATATATGAAGCACTAGATTACTACCTAGAAAATGGTACATTC----TATTTTCATGATTGTAATACATAAATGTATCCTTAT---GTTATTTTATTAATAATAA i rheMac8.chr5 C 0 I 3 s macFas5.chr5 130966670 176 + 189454096 atattttataaagtataaataacataaaacaatatatataGTTGTTGACTTTGTAAAAATAAAGATTAAATAAACAAAAATATATGAAGCACTAGATTACTACCTAGAAAATGGTACATTC----TATTTTCATGATTGTAATACATAAATGTATCCTTAT---GTTATTTTATTAATAATAA i macFas5.chr5 C 0 I 3 s macNem1.NW_012010911v1 34958760 176 - 40319822 atattttataaagtataaataacataaaacaatatatataGTTGTTGACTTTGTAAAAATAAAGATTAAATAAACAAAAATATATGAAGCACTAGATTACTACCTAGAAAATGGTACATTC----TATTTTCATGATTGTAATACATAAATGTATCCTTAT---GTTATTTTATTAATAATAA i macNem1.NW_012010911v1 C 0 I 3 s cerAty1.NW_012000798v1 4510453 177 - 9219162 atattttataaagtataaataacataaaataatatatataGTTGTTGACTTTGtaaaaataaagattaaataaacaaaaacataTGAAGCACTAGATTACTACCTAGAAAATGGTACATTCTAGATATTTTCATGATTGTAATAAATAAAAGTAACCTTAT---GTTATTTTAT---TAATAA i cerAty1.NW_012000798v1 C 0 I 3 s chlSab2.chr7 79037241 173 + 135778131 ATATTTT-TAAAGTATAAGTAACATAAAATAATATATATAGTTGTTGACTTTGTAAAAATAAAGATTAAATAAACAAAAATATATGAAGCACTAGATTACTACCTAGAAAATGGTACATTCTAGATATTTTCATGATTGT----AATAAATGTATCCT--T---GTTATTTTATTAATAATAA i chlSab2.chr7 C 0 I 3 s manLeu1.NW_012103277v1 2813136 180 - 3013352 ATATTTTATAAAGTATAAATAACATAAAATAATATATATAGTTGTTGACTTTGTAAAAATAAAGATTAAATAAACAAAAACACATGAAGCACTAGATTACTACCTAGAAAATGGTACATTCTAGATATTTTCATGATTGTAATAAATAAATGTATCCTTAT---GTTATTTTATTAATAATAA i manLeu1.NW_012103277v1 I 19234 I 3 s colAng1.NW_012114544v1 6036156 175 + 8656713 ATATTTTATAAAATATAGATAACTT-----AATATATATAGTTGTTGACTTTGTAAAAATAAAGATTAAATAAACAAAAATATATGAAGCACTAGATTACTACCTAGAAAATGGTACATTCTAGATATTTTCATGATTATAATAAATAAATGCATCCTCAT---GTTATTTTATTAATAATAA i colAng1.NW_012114544v1 C 0 I 12 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=90950.000000 s hg38.chr9_KI270719v1_random 79547 42 + 176845 ACAAAAATTTATTTTTAGAAT----AATGAATATTATAATT-ATTTT s panTro5.chr4 135103137 42 + 194502333 ACAAAAATttatttttagaat----aatgaatattatgatt-atttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 53937 42 + 95358 ACAAAAATTTATTTTTAGAAT----AATGAATATTATAATT-ATTTT i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131447845 44 + 190429646 ATACGAACTTATTTTTAGAATA---AATGAATATTATGATTCATTTT i rheMac8.chr5 I 3 C 0 s macFas5.chr5 130966849 44 + 189454096 ATACAAACTTATTTTTAGAATA---AATGAATATTATGATTCATTTT i macFas5.chr5 I 3 C 0 s macNem1.NW_012010911v1 34958939 44 - 40319822 ATACGAACTTATTTTTAGAATA---AATGAATATTATGATTCATTTT i macNem1.NW_012010911v1 I 3 C 0 s cerAty1.NW_012000798v1 4510633 47 - 9219162 ATAAAAACTTATTTTTAGAATAAATAATGAATATTATGATTCATTTT i cerAty1.NW_012000798v1 I 3 C 0 s chlSab2.chr7 79037417 36 + 135778131 AT-AAAGCTTATTTTTAG----AATAATGAATATTATGATT------ i chlSab2.chr7 I 3 C 0 s manLeu1.NW_012103277v1 2813319 47 - 3013352 ATAAAAACTTATTTTTAGAATAAATAATGAATATTATGATTCATTTT i manLeu1.NW_012103277v1 I 3 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e colAng1.NW_012114544v1 6036331 12 + 8656713 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=48798.000000 s hg38.chr9_KI270719v1_random 79589 28 + 176845 TATTTTTAGAATAAATAATAAT---------GAATAA s panTro5.chr4 135103179 28 + 194502333 tatttttagaataaataataat---------gaataa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 53979 25 + 95358 TATTTTTAGAATA---AATAAT---------GAATAA i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131447889 36 + 190429646 TATTTTTAGAATAAA-AATAATTTTATTTTAGAATAA i rheMac8.chr5 C 0 I 10 s macFas5.chr5 130966893 20 + 189454096 TATTTTTAGAATAAA-AATAA---------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34958983 36 - 40319822 TATTTTTAGAATAAA-AATAATTTTATTTTAGAATAA i macNem1.NW_012010911v1 C 0 I 10 s cerAty1.NW_012000798v1 4510680 36 - 9219162 TATTTTTAGAATAAA-AATAATTTTATTTTAGAATAA i cerAty1.NW_012000798v1 C 0 I 10 s manLeu1.NW_012103277v1 2813366 36 - 3013352 TATTTTTAGAATAAA-AATAATTTTATTTTAGAATAA i manLeu1.NW_012103277v1 C 0 I 10 s colAng1.NW_012114544v1 6036343 28 + 8656713 TATTTTTAGAATAAA-TAAAAATGAATCT-------- i colAng1.NW_012114544v1 I 12 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e chlSab2.chr7 79037453 0 + 135778131 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=-2580.000000 s hg38.chr9_KI270719v1_random 79617 7 + 176845 ---TATTATT-- s panTro5.chr4 135103207 2 + 194502333 ---ta------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54004 2 + 95358 ---TA------- i gorGor5.CYUI01000801v1 C 0 C 0 s macFas5.chr5 130966913 7 + 189454096 TTTTA-----TT i macFas5.chr5 C 0 I 19 s colAng1.NW_012114544v1 6036371 2 + 8656713 ---TA------- i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2813402 10 - 3013352 I e chlSab2.chr7 79037453 0 + 135778131 C e cerAty1.NW_012000798v1 4510716 10 - 9219162 I e macNem1.NW_012010911v1 34959019 10 - 40319822 I e rheMac8.chr5 131447925 10 + 190429646 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=1027071.000000 s hg38.chr9_KI270719v1_random 79624 275 + 176845 ATAATAATATTATTATTCATTCTTATATACCTTTGAAAAATCATAGGGTAAGATGATTGAAATTCTGTGTATAGCATCTCAGCAGATGAGATATATAAGAAAGAACCATTGCACCCCCATTTACTTAAATCAGTTATAGTTTAAGTTGTTTGAAAAAAGTCATTTATTGGAATCACCACATGACATCAATCAAGAGCAAAGTGTGTAGAATACTGTCAAGTTTTTCTCCAAGAATTTATTTCTG---------------------------------------TTTTCAATTTGCAACTCACTGAAGCATTGAA s panTro5.chr4 135103209 265 + 194502333 ------atattattattcattcttatACACCTTTGAAAAGTCATAGGGTAAGATGATTGAAATTCTGTGTATAGCATCTCACCAGATGAGATCTATAAGAA----CCATTGCACCCCCATTTACTTAAATCAGTTATAGTTTAAGTTGTTTGAAAAAAGTCATTTATTGGAATCACCATATGACATCAATCAAGAGCAAAGTGTGTAGAATACTGTCAAGTTTTTCTCCAAGAATTTATTTCTG---------------------------------------TTTTCAATTTGCAACTCACTGAAGCATTGAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54006 269 + 95358 ------ATATTATTATTCATTCTTATATACCTTTGAAAAATCATAGGGTAAGATGATTGAAGTTCTGTGTATAGCATTTCAGCAGATGAGATCTATAAGAAAGAACCATTGCACCCCCATTTACTTAAATCAGTTATAGTTTAAGTTGTTTGAAAAAAGTCATTTATTGGAATCACCACATGACATCAATCAAGAGCAAAGTGTGTAGAATACTGTCAAGTTTTTCTCCAAGAATTTATTTCTG---------------------------------------TTTTCAATTTGCAACTCACTGAAGCATTGAA i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131447935 275 + 190429646 ATCATAATATTATTATTCATTCTTACACACCTTTGAAAAATCTTAGGGTAAGATGATTGAAATTCTGTGTATAGCATCTCACCAGATGAGATCTACAAGAAAGAACCATTGCACCTCCGTATACTCAAATCAGTTATAGTTTCAATTGTTTGAAAAAAGTCATTTATTGGCATCACCACATGACATCAATCAAGAGCAAAGGGTATAGAATACTGTCAAGTTTTTCTCCAAGAATTTATTTCTG---------------------------------------TTTTCAATTTGCAACTCACTGAAGCATTGAA i rheMac8.chr5 I 10 C 0 s macFas5.chr5 130966939 275 + 189454096 ATCATAATATTATTATTCATTCTTACACACCTTTGAAAAATCTTAGGGTAAGATGATTGAAATTCTATGTATAGCATCTCACCAGATGAGATCTACAAGAAAGAACCATTGCACCTCCGTATACTCAAATCAGTTATAGTTTCAATTGTTTGAAAAAAGTCATTTATTGGCATCACCACATGACATCAATCAAGAGCAAAGGGTATAGAATACTGTCAAGTTTTTCTCTAAGAATTTATTTCTG---------------------------------------TTTTCAATTTGCAACTCACTGAAGCATTGAA i macFas5.chr5 I 19 C 0 s macNem1.NW_012010911v1 34959029 275 - 40319822 ATCATAATATTATTATTCATTCTTAAACACCTTTGAAAAATCTTAGGGTAAGATGATTGAAATTCTATGTATAGCATCTCACCAGATGAGATCTACAAGAAAGAACCATTGCACCTCCGTATACTCAAATCAGTTATAGTTTCAATTGTTTGAAAAAAGTCATTTATTGGCATCACCACATGACATCAATCAAGAGCAAAGGGTATAGAATACTGTCAAGTTTTTCTCCAAGAATTTATTTCTG---------------------------------------TTTTCAATTTGCAACTCACTGAAGCATTGAA i macNem1.NW_012010911v1 I 10 C 0 s cerAty1.NW_012000798v1 4510726 275 - 9219162 ATCATAATATTATTATTCATTCTTACACACCTTTGAAAAATCTTAGGGTAAGATGATTGAAATTCTATGTATAGCATCTCACCAGATGAGATCTACAAGAAAGAACCATTGCACCTCCGTATACTCAAATCAGTTATAGTTTCAATTGTTTGAAAAAAGTCATTCATTGGCATCACCACATGACATCAATCAAGAGCAAAGGGTATAGAATACTGTCAAGTTTTTCTCCAAGAATTTATTTCTG---------------------------------------TTTTCAATTTGCAACTCACTGAAGCATTGAA i cerAty1.NW_012000798v1 I 10 C 0 s chlSab2.chr7 79037453 297 + 135778131 -----------------CATTCTTACACACCTTTGAAAAATCTTAGGGTAAGATGATTGAAATTCGATGTATAGCATCTCACCAGATGAGATCTACAAGAAAGAACCATTGCACCTCCATATACTCAAATTAGTTATAGTTTCAATTGTTTGAAAAAAGTCATTTATTGGCATCACCACATGACATCAATCAAGAGCAAAGTGTATAGAATACTGTCAAGTTTTTCTCCAAGAATTTAtttctgttttcaatttgcaactcactcaatttgcaactcactcaattttcaatttgcaaCTCACTGAAACATTGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2813412 275 - 3013352 ATTATAATATTATTATTCATTCTTACACACCTTTGAAAAATCTTAGGGTAAGATGATTGAAATTCTATGTATAGCATCTCACCAGATGAGATCTACAAGAAAGAACCATTGCACCTCCGTATACTCAAATCAGTTATAGTTTCAATTGTTTGAAAAAAGTCATTTATTGGCATCACCATATGACATCAATCAAGAGCAAAGTGTATAGAATACTGTCAAGTTTTTCTCCAAGAATTTATTTCTG---------------------------------------TTTTCAATTTGCAACTCACTGAAGCATTGAA i manLeu1.NW_012103277v1 I 10 M 885 s colAng1.NW_012114544v1 6036373 267 + 8656713 ------ATATTATTATTCATTCTTACACACCTTTGAAAAATCTTAGGGTAAGATGATTGAAATTCTGTGCATAGCATCTCACCAGATGAGATCTGTAAGAAAGAACCATTGCACCTCCATATACTCAAATCAGTTATAGTTTCAATTGTTTGAAAAAAGTCATTTATTGGCATCACCACATGACATCAATCAAGAGCAAAGTGTATAGAATACTGTCAAGTTTTTCTCCAAGAATTTATT--TG---------------------------------------TTTTCAATTTGCAACTCACTGAAGTATTGAA i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=645138.000000 s hg38.chr9_KI270719v1_random 79899 211 + 176845 CATTTTATGAGCTCTACAACTAACAATGCCTGGGAATTTAAATATTTTCCATGGAATCTGTTTACTTCAAAT----GAAAAAAAAGGAGCAGATATGATAATGAATAATTTACCATGCGTATATGGTACAAAGTAGAATCTTTAAAAATAAAGACACAAACAGCAACAACCACAAAAACCTCAATTGTTTCTGCTTTTGTTCTATTTTTAGTGA---------A s panTro5.chr4 135103474 211 + 194502333 CATTTTATGAGCTCTACAACTAACAATGCCTGGGAATTTAAGTATTTTCCATGGAATATGATTACTTCAAAT----GAAAAAAAAGGAGCAGATATGATAATGAATAATTTACCATGCGTATATGGTACAAAGTAGAATCTTTAAAAATAAAGACACAAACAGCAACAACCACAAAAACCTCAATTGTTTCTGCTTTTGTTCTATTTTTAGTGA---------A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54275 210 + 95358 CATTTTATGAGCTCTAAAACTAACAATGCCTGGGAATTTAAATATTTTCCATGGAATATGATTACTTCAAAT----G-AAAAAAAGGAGCAGATATGATAATGAATAATTTACCATGTGTATATGGTACAAAGTAGAATCTTTAAAAATAAAGACACAAACAGCAACAACCACAAAAACCTCAATTGTTTCTGCTTTTGTTCTATTTTTAGTGA---------A i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131448210 222 + 190429646 CATTTTATGAGCTCTACAACTAACAATGCCTGGGAATTTAAATATTTTCCATGGAATATAATTACTTCAAAT--AAAAAAAAAAAGGAGCAGGTATGATAATGAATAATTTACCATGCGTATGTGATACAAAGTGGAATCTTcaaaaataaagacacaaacagcaacaaccacaaaaaTCTAAATTGTTTCTGCTTTTGTTCTATTTTTAGTGAACTTAAAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130967214 222 + 189454096 CATTTTATGAGCTCTACAACTAACAATGCCTGGGAATTTAAATATTTTCCATGGAATATAATTACTTCAAAT--AAAAAAAAAAAGGAGCAGGTATGATAATGAATAATTTACCATGCGTATGTGATACAAAGTGGAATCTTcaaaaataaagacacaaacagcaacaaccacaaaaaTCTAAATTGTTTCTGCTTTTGTTCTATTTTTAGTGAACTTAAAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34959304 221 - 40319822 CATTTTATGAGCTCTACAACTAACAATGCCTGGGAATTTAAATATTTTCCATGGAATATAATTACTTCAAAT---AAAAAAAAAAGGAGCAGGTATGATAATGAATAATTTACCATGCGTATGTGATACAAAGTGGAATCTTcaaaaataaagacacaaacagcaacaaccacaaaaaTCTAAATTGTTTCTGCTTTTGTTCTATTTTTAGTGAACTTAAAATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4511001 220 - 9219162 CATTTTACGATTTCTACAACTAACAATGCCTGGGAATTTAAATATTTTCCATGGAATATAATTACTTCAAATAAAAAAAAAAAAAGGAGCAGGTATGATAACGAATAATTTACCATGCGTATGTGAC----AGTGGAATCTTCaaaactaaagacacaaacagcaacaaccacaaaaaTCTAAATTGTTTCTGCTTTTGTTCTATTTTTAGTGAACTTAAAATA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79037750 223 + 135778131 CATTTTATGAGCTCTACAACTAACAATGCCTGGGAATTTAAATATTTTCCATGGAATATAATTACTCCAAAA-AAAAAAAAAAAAGGAGCAGGTATGATAATGAATAATTTACCATGCGTATGTGATACAAAGTGGAATCTTcaaaaataaagacacaaacagcaacaaccacaaaaacCTAAATTGTTTCTGCTTTTGCTCTATTTTTAATGAACTTAAAATA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6036640 223 + 8656713 CATTTTATGAGCTCTACAACTAACAATGCCTGGGAATTTAAATATTTTCCATGGAATATAATTACTTCAAAT-AAAAAAAAAAAAGGAGCAGATATGATAATGAATAATTTACCATGCATATATGATACAAAGTGGAATCTTcaaaaataaagacacaaacagcaacaaccacaaaaacCTAAATTGTTTCTGCTTTTGTTCTATTTTTAGTGAACTTAAAATA i colAng1.NW_012114544v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e aotNan1.NW_018507635v1 14952930 3091 + 15034901 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e calJac3.chr3 129470750 2079 - 190850796 I e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e nomLeu3.chr7b 90491342 0 - 115148730 C a score=5500.000000 s hg38.chr9_KI270719v1_random 80110 1 + 176845 C s panTro5.chr4 135103685 1 + 194502333 C i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54485 1 + 95358 C i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131448432 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130967436 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34959525 1 - 40319822 C i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4511221 1 - 9219162 C i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79037973 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6036863 1 + 8656713 C i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129472829 1 - 190850796 C i calJac3.chr3 I 2079 C 0 s aotNan1.NW_018507635v1 14956021 1 + 15034901 C i aotNan1.NW_018507635v1 I 3091 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e cebCap1.NW_016107420v1 4097297 2072 - 6311556 I e saiBol1.JH378129 6535336 3435 - 25294431 I e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e nomLeu3.chr7b 90491342 0 - 115148730 C a score=1447427.000000 s hg38.chr9_KI270719v1_random 80111 282 + 176845 TTAAAATTTTAAGAGAAACTCTTTCTCCTTGTTTTTAACACGTGTAGAGAGAGGTGTGGAATATTGTAAAGCTTTTTATCTGATTCGGCCTGAGTCTCAATAGATGAAGATTCATCGAGTTtagtaggccgaatagttttttctaaaagatatgtgacgcgttaatccttggaatctttgaatataatgacacgttaaacagtgaatattaccttatacggcaatgcttgtgattaagttaaggactttaagggaaggggcttattctgaaatatactcacg s panTro5.chr4 135103686 282 + 194502333 TTAAAATTTTAAGAGAAACTCTTTCTCCTTGTTTTTAACACCTGCAGAGAGAGGTGTGGAATATTGTAAAGCTTTTTATCTGACTCGGCCTGAGTCTCAGTAGATGAAGACACATCGAGTTtagtaggccaaatagttttttgtaaaagatatgtgacgcgttaatccttggaatctttgaatataatgacacgttaaacagttaatattaccttatatggcaatgcttgtgattaagttaaggactttaagggaaggggcttattctgaaatatactgacg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54486 282 + 95358 TTAAAATTTTAAGAGAAACTCTTTCTCCTTGTTTTTAACACGTGTAGAGAGAGGTGTGGAATATTGTAAAGCTTTTTATCTGACTCGGCCTGAGTCTCAGTAGATGAAGACTCATCGAGTTtagtaggccgaatagttttttctaaaagatatgtgacgcgttaatccttggaatctttgaatataatgacacattaaacagtgaatattaccttaaatggcaatgcttgtgattaagttaaggactttaagggaaggggcttattctgaaatatactcacg i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131448433 282 + 190429646 TTAAAATTTTAAGAGAAACTCTTTCTCCTTGTTTTTAACACTTGCAGAGAGAGGGGTGGAATATTGTAAAGCTTTTTATCTGACTCTGGCTAAGTCTCAGCAGATGAAGACTCATCGAATTTAGTAGGCTGTATAGTTTTTTCTAAAAGATATGTGATGCGTTAATCCTTGGGATCTTTGAATATAATGACAGGTTAAGCAgtgaatattaccttatatggcaaaacttgtgattaagttaaggactttaagggaaggggtttattctgaattatactcatg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130967437 282 + 189454096 TTAAAATTTTAAGAGAAACTCTTTCTCCTTGTTTTTAACACTTGCAGAGAGAGGGGTGGAATATTGTAAAGCTTTTTATCTGACTCTGGCTAAGTCTCAGCAGATGAAGACTCATCGAATTTAGTAGGCTGTATAGTTTTTTCTAAAAGATATGTGATGCGTTAATCCTTGGGATCTTTGAATATAATGACAGGTTAAGCAgtgaatattaccttatatggcaaaacttgtgattaagttaaggactttaagggaaggggtttattctgaattatactcatg i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34959526 282 - 40319822 TTAAAATTTTAAGAGAAACTCTTTCTCCTTGTTTTTAACACTTGCAGAGAGAGGGGTGGAATATTGTAAAGCTTTTTATCTGACTCTGGCTAAGTCTCAGCAGATGAAGACTCATCGAATTTAGTAGGCTGTATAGTTTTTTCTAAAAGATATGTGATGCGTTAATCCTTGGGATCTTTGAATATAATGACAGGTTAAGCAgtgaatattaccttatatggcaaaacttgtgattaagttaaggactttaagggaaggggtttattctgaattatactcatg i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4511222 282 - 9219162 TTAAAATTTTAAGAGAAACTCTTTCTCCTTGTTTTTAACACTTGCAGAGAGAGGGGTGGAATATTGTAAAGCTTTTTATCTGACTCTGGCTAAGTCTCAGCAGATGAAGACTCATCGAATTTAGTAGGCTGTATAGTTTTTTCTAAAAGATATGTGATGTATTAATCCTTGGGATCTTTGAATATAATGACAGGTTAAGCAgtgaatattaccttatatggcaaaacttgtgattaagttaaggactttaagggaaggggtttattctgaattatactcatg i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79037974 282 + 135778131 TTAAAATTTTAAGAGAAACTCTTTCTCCTTGTTTTTAACACTTGTAGAGAGAAGGGTGGAATATTGTAAAGCTTTTTATCTGACTCTGGCTAAAGCTCAGCAGATGAAGACTCATCGAATTTAGTAGGCTGTGTAGTTTTTTCTAAAAGATATGTGATGCGTTAATCCTTGGGATCTTTGAATATAATGACAGGTTAAGCAgtgaaaattatcttatatggcaaaacttgtgattaagttaaggactttaagggaaggggtttattctgaattatactcatg i chlSab2.chr7 C 0 I 31 s colAng1.NW_012114544v1 6036864 282 + 8656713 TTAAAATTTTAAGAGAAACTCTTTCTCCTTGTTATTAACACTTGTAGAGAGAGGGGTGGAATATTGTAAAGCTTTTTATCTGACTCTGGCTAAGTCTCAGCAGATGAAGACTCATCGAATTtagtaggctgtatagttttttctaaaagatatgtgacgtgttaatccttgggatctttgaatataatgacaggttaagcagtgaatattaccttataaggcaaaacttgtgattaacttaaggactttaagggaaggggctgattctgaattatactcatg i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129472830 270 - 190850796 TTAAAATTTTAAAAGGAACTCTTCCCTCTTGCTTTTAACTCTTGTAGAGAGAGGGGTGGAGTATTGTAAAACTTTTTATCTGACTCTGCCTGTGTCTCAGCAGATGAAGACTCATCCAGTTCAGTAGCCT-AATAGTTTTTTCTAaaagatatattatgtactaatccttggagtctttgaatataatgacacgttaaacagtgcatattacattatatggcaaagcttgt-----cattaaggattttgaggtaaggggcttattctgaattatg------ i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4099369 271 - 6311556 TTAAAATTTTAAGAGGAACTCTTCCCTCTTGCTTTTAACACTTGCAGAGAGAGGGGTGGAGTATTGTAAAGCTTTTTATCTGACTCTGCCTGTGTCTCAGCAGATGAAGACTCATCAAGTTCAgtaggctaaatagttttttctaaaagatataccatgtactaatccttggaatctttgaatataatgacacgttaaacagtacatattaccttatatggcaaagcttgt-----cgttaaggattttaaggtaaggggcttattctgaattatg------ i cebCap1.NW_016107420v1 I 2072 C 0 s aotNan1.NW_018507635v1 14956022 271 + 15034901 TTAAAATTTTAAGAGGAACTCTTCCCTCTTGCTTTTAACACTTGTAGAGAGAGGGGTGGAGTATTGTAAAGCTTTTTATCTGACTCTGCCTGTGTCTCAGCAGATGAAGACTCATCGAGTTCAgtaggctaaatagttttttctaaaagatatatcatgtactaatccttggaatctttgaatataatgacacgttaaacagtgcatattatcttacatggcaaagcttgt-----tgttaaggattttaaggtaaggggcttattctgaattatg------ i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e nomLeu3.chr7b 90491342 0 - 115148730 C a score=12609.000000 s hg38.chr9_KI270719v1_random 80393 3 + 176845 ggt s panTro5.chr4 135103968 3 + 194502333 ggt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54768 3 + 95358 ggt i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131448715 3 + 190429646 agt i rheMac8.chr5 C 0 I 3 s macFas5.chr5 130967719 3 + 189454096 agt i macFas5.chr5 C 0 I 3 s macNem1.NW_012010911v1 34959808 3 - 40319822 agt i macNem1.NW_012010911v1 C 0 I 43 s cerAty1.NW_012000798v1 4511504 3 - 9219162 agt i cerAty1.NW_012000798v1 C 0 I 2 s colAng1.NW_012114544v1 6037146 3 + 8656713 agt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129473100 3 - 190850796 agt i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4099640 3 - 6311556 agt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14956293 3 + 15034901 agt i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e chlSab2.chr7 79038256 31 + 135778131 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=37374.000000 s hg38.chr9_KI270719v1_random 80396 50 + 176845 ctctaattcaatgacaaatgttctt--------------tttttttttgagatggagt--ct----tgta s panTro5.chr4 135103971 63 + 194502333 ctttaattcaatgacaaatgttcttcttcttcttttttttttttttttgagatggagc--ct----ttt- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54771 57 + 95358 ctttaattcaatgacaaatgttcttcttcttt-------tttttttttgagatggagt--ct----tgtt i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131448721 38 + 190429646 -----------------tttttttttatttttta-----tttttttctgatatggagt--ct-------- i rheMac8.chr5 I 3 C 0 s macFas5.chr5 130967725 38 + 189454096 -----------------ttattttttatttttta-----tttttttctgatatggagt--ct-------- i macFas5.chr5 I 3 C 0 s cerAty1.NW_012000798v1 4511509 40 - 9219162 -----------------tttttttttttatttta-----tttttttctgatatggagt--ctcg------ i cerAty1.NW_012000798v1 I 2 C 0 s colAng1.NW_012114544v1 6037149 37 + 8656713 --------------------tttttttttttttt-----tttttttctgagatggagt--ct--cg---- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129473103 51 - 190850796 ctttaattaaatgataaatgttct------tctg-----tttgtttttgagacagtctcgct-------- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4099643 55 - 6311556 ctttaactaaatgataaatgttctt--ttgtttg-----tttgtttttgagacagtcttgct-------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14956296 51 + 15034901 ctttaattaaatgataaatgttat------tttg-----tttgtttttgagacagtctcgct-------- i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e chlSab2.chr7 79038256 31 + 135778131 I e macNem1.NW_012010911v1 34959811 43 - 40319822 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=3024.000000 s hg38.chr9_KI270719v1_random 80446 2 + 176845 ct s panTro5.chr4 135104034 2 + 194502333 ct i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54828 2 + 95358 ct i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131448759 2 + 190429646 ca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130967763 2 + 189454096 ca i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34959854 2 - 40319822 ca i macNem1.NW_012010911v1 I 43 C 0 s calJac3.chr3 129473154 2 - 190850796 ct i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4099698 2 - 6311556 ct i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14956347 2 + 15034901 ct i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I e colAng1.NW_012114544v1 6037186 0 + 8656713 C e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e chlSab2.chr7 79038256 31 + 135778131 I e cerAty1.NW_012000798v1 4511549 0 - 9219162 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=618005.000000 s hg38.chr9_KI270719v1_random 80448 130 + 176845 ttcgcccaggctggaggggtgcagtggtgcgatctctgctcactgccacctctgcctcccgggttcaagcaattctcctgcctcagcctcctgaggag-tgggattacaa---gcgcctgccatcatgcccaga s panTro5.chr4 135104036 129 + 194502333 ttcacccaggctggaggagtgcagtggtgcgatctctgctcactgcaacctctacctcccag-ttcaagcaattctcctgcctcagcctcctgaggag-tgggattacaa---gtgcctgccatcatgcccaga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54830 130 + 95358 ttcgcccaggctggaggagtgcagtggtgcgatctctgctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcctgaggag-tgggattacaa---gcgcctgccatcatgcccaga i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131448761 128 + 190429646 ctctcccaggctgga---gtgtagtggtacgatctctgctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcccagggagctgggattacaa---gtgcctgccatcatgcccaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130967765 128 + 189454096 ctctcccaggctgga---gtgtagtggtacgatctctgctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcccagggagctgggattacaa---gtgcctgccatcatgcccaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34959856 128 - 40319822 ctctcccaggctgga---gtgcagtggtacgatctctgctcactgcaacctctgcctcgcgggttcaagcaattctcctgcctcagcctcccagggagctgggattacaa---gtgcctgccatcatgcccaga i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4511549 128 - 9219162 ctctcccaggctgga---gtgcagtggtgcgatctctgctcgctgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcccagggagctgggattacaa---gtgcctgccatcatgcccaga i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79038287 128 + 135778131 ctctcccaggctgga---gtgcagtggtgcgatctctgcttactgcaacctctgcttcccgggttcaagcaattctcctgcctcagcctcccagggagctgggattacaa---gtgcctgccatcatgcccaga i chlSab2.chr7 I 31 C 0 s colAng1.NW_012114544v1 6037186 128 + 8656713 ctctcccaggctgga---gtgcagtgctgcgatctctgctcactgcaacttctgcctcccgggttcaagcaattctcctgcctcagcctcccagggagctgggattacaa---gtgcctgctatcatgcccaga i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129473156 131 - 190850796 gttgcccaggcttga---gtgcagtgacatgatctctgctctctgcaacctcagcttcctgggttcaaacaattctcctgcctcagcatcctgagcagctgggattacaacaggcacccgctaggatgcctggc i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107420v1 4099700 131 - 6311556 gttgcccaggcttga---gtgcagtgacacgatctcggctctctgcaagcttggcttcctgggttcaaacaattctcctgcctcagcctcctgagcagctgggattacaacaggcacccgctaggatgcctggc i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14956349 131 + 15034901 gttgcccaggcttga---gtgcagtgacacgatctcggctctctgcaatcttggcttcctgggttcaaacaattctcctgcctcagcctcctgagcagctgggattacaataggcacctgctaagacgcctggc i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e saiBol1.JH378129 6535336 3435 - 25294431 I e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e nomLeu3.chr7b 90491342 0 - 115148730 C a score=837694.000000 s hg38.chr9_KI270719v1_random 80578 143 + 176845 taatttttgtacttttattcaaggaagggtttcaccatgttagccaggctggtctcaaactcctgacctcaagttattcgccctcctcggcctcccaaattgctgggattacaggcatgagccactgtgcctggcctgacaaa s panTro5.chr4 135104165 143 + 194502333 taatttttgtacttttattagaggaagggtttcaccatgttagccaggctggtctcaaactcctgacctcaagttattcaccctcctcggcctcctaaattgctgggattacaggcatgagccactgtgcctggcctgacaaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 54960 143 + 95358 taatttttgtacttttattagaggaagggtttcaccatgttagccaggctggcctcaaactcctgacctcaagttattcgccctcctcggcctcccaaattgctgggattacaggcatgagccactgtgcctggcctgacaaa i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131448889 143 + 190429646 taatttctgtatttttattagaggaagggtttcaccatgttagccaggctggtctcgaactcctgacctcaggtcgtctgcccacttgggcctcccaaattgctgggattacagacatgagccactgagcctggcctgacaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130967893 143 + 189454096 taatttctgtatttttattagaggaagggtttcaccatgttaaccaggctggtctcgaactcctgacctcaggtcgtctgcccacttgggcctcccaaattgctgggattacagacatgagccactgagcctggcctgacaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34959984 143 - 40319822 taatttctgtatttttattagaggaagggtttcaccatgtcagccaggctggtctcgaactcctgacctcaggtcgtctgcccacttgggcctcccaaattgctgggattacagacatgagccactgagcctggcctgacaaa i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4511677 143 - 9219162 taatttctgtatttttattagaggaagggtttcaccatgttagccaggctggtctcgaactcctgacctcaggtcgtctgcctgcttggacctcccacattgctgggattacagacatgagccactgagcctggcctgacaaa i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79038415 143 + 135778131 taatttctgtatttttattagaggaagggtttcaccatgttagccaggctggtcttgaactcctgacctcaggtcgttcgcccgcctgggcctcccaaattgctgggattacaagcatgagccactgagcctggcatgaaaaa i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6037314 143 + 8656713 taatttctgtatttttattagaggaagggtttcaccatgttagccaggctggtctcgaactcctgacctcaggttgtctgccgccctgggcctcccaaattgctgggattacaggcatgagccactgagcctggcctgacaaa i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129473287 143 - 190850796 taatttttgtacttttagtaaagacagggtttcagcatgttggccaggctggtctagaactcctgacctcaggtgattcgcccgcctcggcctcccaacattctgggattacagatgtgaggcaccgtaccaggtctgacaaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6538771 143 - 25294431 taatttttgtacttttagtaaagacagggtttcaccatgttggccatgctggtctagaattcctgacctcaggcgattcgcccacctcagcctgccaaaatgctgggattacagatgtgaggcactgcacccggtcTGACAAA i saiBol1.JH378129 I 3435 C 0 s cebCap1.NW_016107420v1 4099831 142 - 6311556 taatttttgcacttttagtaaagacggggtttcaccatgttggccaggctggtctagaactcctgacctcaggcgattcacctgcctcggcctcccaaagtgct-ggattacagaagtgaggcaccacaccaggtctgacaga i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14956480 143 + 15034901 taatttttgtacttttattaaagacagggtttcaccatgttggccaggctggtctagaactcctgacctcaggtgattcgcccaccttggtctcccaaagtgctgggattacagatgtgaggcaccgcacctggtctgacaaa i aotNan1.NW_018507635v1 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 967288 11685 - 3201129 I e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e nomLeu3.chr7b 90491342 0 - 115148730 C a score=65585.000000 s hg38.chr9_KI270719v1_random 80721 9 + 176845 tgttttttt s panTro5.chr4 135104308 9 + 194502333 tgttctttt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55103 9 + 95358 tgttttttt i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449032 9 + 190429646 tgttctttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968036 9 + 189454096 tgttctttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960127 9 - 40319822 tgttctttt i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4511820 9 - 9219162 tgttctttt i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79038558 9 + 135778131 tgttctttt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6037457 9 + 8656713 tgttctttt i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129473430 9 - 190850796 tgttctttt i calJac3.chr3 C 0 I 305 s saiBol1.JH378129 6538914 9 - 25294431 TGTTCTTTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4099973 9 - 6311556 tgttctttt i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14956623 9 + 15034901 tgttctttg i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 978973 9 - 3201129 TATTCTTCC i otoGar3.GL873702 I 11685 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e nomLeu3.chr7b 90491342 0 - 115148730 C a score=486090.000000 s hg38.chr9_KI270719v1_random 80730 107 + 176845 aagagtgagtcagagggagacttgacacacagaagag---gaggcaatgtgaccagggagcagagattggagtggcgcagcccccagaagctggg--------------------gaaaaggaatgctgg- s panTro5.chr4 135104317 107 + 194502333 aagagtgagtcagagggagacttgacacacagaagag---gaggcaatgtgaccagggagcagagattggagtggtgcagcccccagaagctggg--------------------gtaaaggaatgctgg- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55112 126 + 95358 aagagtgagtcaga-ggagacttgacacacagaagag---gaggcaatgtgaccagggagcagagattggagtggtgcagcccccagaagctggggaaaaggaatgctggcatgagtaaaggaatgctgg- i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449041 78 + 190429646 aagagtgagtcagagggagacttgacacacagaagag---gaggcaatgtgaccagggagcagggattggaatggtgcagc-------------------------------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968045 78 + 189454096 aagagtgagtcagagggagacttgacacacagaagag---gaggcaatgtgaccagggagcagggattggaatggtgcagc-------------------------------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960136 78 - 40319822 aagagtgagtcagagggagacttgacacacagaagag---gaggcaatgtgaccagggagcagggattggaatggtgcagc-------------------------------------------------- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4511829 78 - 9219162 aagagtgagtcagagggagacttgacacacagaagag---gaggcaatgtgaccagggagcagggattggaatggtgcagc-------------------------------------------------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79038567 78 + 135778131 aagagtgagtcagagggagacttgacacacagtagag---gaggcaatgtgaccagcgagcagagattggagtggtgcagc-------------------------------------------------- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6037466 78 + 8656713 aagagtgagtcagagggagacttgacacacagaagag---gaggcaatgtgaccagggaacagagattggagtggtgcagc-------------------------------------------------- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129473744 79 - 190850796 aagagtgagttagagggaaacttgacacacagaagagaaagaggcaatatcaccagggagc--agattgatgtggtacagc-------------------------------------------------- i calJac3.chr3 I 305 C 0 s saiBol1.JH378129 6538923 81 - 25294431 AAGAGTGAGTTAGAgggaaacttgacacacagaagagaaagaggcaatatgaccagggagcagagatttgtgtggtaccgc-------------------------------------------------- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4099982 81 - 6311556 aagagtgagttagagggaaacttgacacacagaagagaaagaggcaatatgaccagggagcagagattggtctggtacagc-------------------------------------------------- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14956632 81 + 15034901 aagagtgagttacagggaaacttgacacacagaagagaaagaggcaatatgaccagggagcagagattggtgtggtacagc-------------------------------------------------- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 978982 74 - 3201129 AAGAGTAAGGCAGAGGAAAACTTGACACCC---AGGG---AAGGTGATGTGACCACGGAGCAGAGACTGG--TGGGGCAGC-------------------------------------------------C i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e manLeu1.NW_012103277v1 2813687 885 - 3013352 M e nomLeu3.chr7b 90491342 0 - 115148730 C a score=1642976.000000 s hg38.chr9_KI270719v1_random 80837 204 + 176845 catgagtaaaggaatgctggcagcccccaga--agctggaagatccacagaatggattctctctagggacctcagagcgagtgtggccccact-------gtatttaggacttctagcctctagaactgttttagaatacattgctgttgttgaagtcatttagtttgtgtcaatttgttgtgatagcctagggaactaatataATGAAGCAT s panTro5.chr4 135104424 204 + 194502333 catgagtaaaggaatgctggcagcccccaga--agctggaagatccacagaatggattctctctagggacctcagagcgagcgtggccccact-------gtatttaggacttctagactctagaactgttttagaatacattgctgttgttgaagtcatttagtttgtgtcaatttgttgtggtagcctagggaactaatataATGAAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55238 204 + 95358 catgagtaaaggaatgctggcagcccccaga--agctggaagatccacagaatggattctctctagggacctcagagcgagtgtggccccact-------gtatttaggacttctagcctctagaactgttttagaatacattgctgttgttgaagtcatttagtttgtgtcaatttgttgtgatagcctagggaactaatataATGAAGCAT i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449119 204 + 190429646 catgagtaaaggaatgccggcagcctccaga--agctggaagatccacagaatggattcactctagggatctcagagcgagtgtggctccact-------gtatttaggacttctagtctctagaactgttttagaatacattgctgttgttgaagtcatttagtttgtgtcaatttgttgtgatggcctagggagctaatataATGAAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968123 204 + 189454096 catgagtaaaggaatgccggcagcctccaga--agctggaagatccacagaatggattcactctagggatctcagagcgagtgtggctccact-------gtatttaggacttctagtctctagaactgttttagaatacattgctgttgttgaagtcatttagtttgtgtcaatttgttgtgatggcctagggagctaatataATGAAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960214 204 - 40319822 catgagtaaaggaatgctggcagcctccaga--agctggaagatccacagaatggattcactctagggatctcagagcgagtgtggccccact-------gtatttaggacttctagtctctagaactgttttagaatacattgctgttgttgaagtcatttagtttgtgtcaatttgttgtgatggcctagggagctaatataATGAAGCAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4511907 204 - 9219162 catgagtaaaggaatgccggcagcctccaga--agctggaagatccacagaatgggttcactctagggatctcagagtgagtgtggccccact-------gtatttaggacttctagtctctagaactgttttagaatacattgctgttgttgaagtcatttagtttgtgtcaatttgttgtgatggcctagggagctaatataATGAAGCAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79038645 190 + 135778131 catgagtaaaggaatgcctgcagcctccaga--agctggaagatccacag--------------agggacctcagagcgagtgtggccccact-------gtatttaggacttctagtctctagaactgttttagaatacactgctgttgttgaagtcgtttagtttgtgtcaatttgttgtgatggcctagggagctaatataATGAAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2814593 204 - 3013352 catgagtaaaggaatgccggcagcctccaga--agctggaagatccacagaatgggttcactctagggatctcagagcgagtgtggcaccact-------gtatttaggacttctagtctctagaactgtttcagaatacattgctgttgttgaagtcatttagtttgtgtcaatttgttgtgatggcctagggagctaatataATGAAGCAT i manLeu1.NW_012103277v1 M 885 C 0 s colAng1.NW_012114544v1 6037544 200 + 8656713 catgagtagaggaatgctggcagcctccaga--agctggaagatccacagaatggattcactctagggacctca----gagtgtggccccact-------gtatttaggacttctagtctctagaactgttttagaatacattgctgttgttgaagtcatttagtttgtgtcaatttgttgtgatggcctagggagctaatataATGAAGCAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129473823 204 - 190850796 catgagtaaaggaatgctggtagcctccaga--agctggaagatgcacagaatggattctctctagggacctcagagtgagtgtggctccact-------gcatttaggacttctaaaccctagaactgttttagaatacattgctattgttgaaatcatttagtttgtgtcaatttgccgtgacagtcTAAGGAGCAAATATAATGAAGCAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6539004 204 - 25294431 catgagtaaaggaatgctggtagcctccaga--agctggaagatgcacagaatggattctctctaggaacctcagagtgagtgtggctccacc-------gcatttagaacttctgaactctagaactgttttagaatacattgctatcgttgaaatcatttagtttgtgtcaatttgctgtgatagcctaaagagcaaatataATGAAGCAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4100063 204 - 6311556 catgagtaaaggaatgctggtagcctccaga--agctggaagatgcacagaatggattctctctagggacctcagagtgaatgtggctccact-------gcatttaggacttctaaactctagaactgttttagaatacattactattgttgaaatcatttagtttgtgtcaatttgctgtgatagcctaaggaCCAAATATAATGAAGCAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14956713 204 + 15034901 catgagtaaaggaatgctggtagcctccaga--agctggaagatgcacagaacggattctctctcaggacctcagagcgagtgtggctccact-------gcatgtaggacttctaaactctagaactgttttagaatacattgctattgttgaagtcatttagtttgtgtcaatttgctgtgatagcctaaggagcaaatataATGAAGCAC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 979056 187 - 3201129 -----GTGAGGGAGAGCGGCCAACAGCCAGGGCAGCTAGCAGAGACCCCGGATGGATGCCCTCTAGGGACCTCAGACCTGG-GTGTCCCCACTGGAGTTAGGATTTAGAACTCCCAGTCTCTCAAACTGGGTTAAATTAC--------------------CTAGTTTGTGTTTATTTAGTGTGGCAGCCTAGGAAGCTGATATAATGAAGGGG i otoGar3.GL873702 C 0 I 9 e micMur3.chr14 66975454 0 + 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=10035.000000 s hg38.chr9_KI270719v1_random 81041 1 + 176845 G s panTro5.chr4 135104628 1 + 194502333 G i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55442 1 + 95358 G i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449323 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968327 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960418 1 - 40319822 G i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4512111 1 - 9219162 G i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79038835 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2814797 1 - 3013352 G i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6037744 1 + 8656713 G i colAng1.NW_012114544v1 C 0 I 20 s calJac3.chr3 129474027 1 - 190850796 G i calJac3.chr3 C 0 I 2 s saiBol1.JH378129 6539208 1 - 25294431 G i saiBol1.JH378129 C 0 I 34 s cebCap1.NW_016107420v1 4100267 1 - 6311556 G i cebCap1.NW_016107420v1 C 0 I 3 s aotNan1.NW_018507635v1 14956917 1 + 15034901 a i aotNan1.NW_018507635v1 C 0 I 38 s micMur3.chr14 26344491 1 - 93316391 G i micMur3.chr14 I 4850 C 0 s otoGar3.GL873702 979252 1 - 3201129 G i otoGar3.GL873702 I 9 C 0 e dasNov3.JH569232 1788628 25244 + 5974691 I e rhiRox1.KN299219v1 8743 2387 - 733946 I e canFam3.chr19 44070355 5271 - 53741614 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=38670.000000 s hg38.chr9_KI270719v1_random 81042 4 + 176845 gaga s panTro5.chr4 135104629 4 + 194502333 gaga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55443 4 + 95358 gaga i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449324 4 + 190429646 gaga i rheMac8.chr5 C 0 I 28 s macFas5.chr5 130968328 4 + 189454096 gaga i macFas5.chr5 C 0 I 28 s macNem1.NW_012010911v1 34960419 4 - 40319822 gaga i macNem1.NW_012010911v1 C 0 I 22 s cerAty1.NW_012000798v1 4512112 4 - 9219162 gaga i cerAty1.NW_012000798v1 C 0 I 28 s manLeu1.NW_012103277v1 2814798 4 - 3013352 gaga i manLeu1.NW_012103277v1 C 0 I 28 s colAng1.NW_012114544v1 6037765 4 + 8656713 gaga i colAng1.NW_012114544v1 I 20 I 6 s rhiRox1.KN299219v1 11130 4 - 733946 gaga i rhiRox1.KN299219v1 I 2387 N 0 s calJac3.chr3 129474030 4 - 190850796 gaga i calJac3.chr3 I 2 I 18 s saiBol1.JH378129 6539243 4 - 25294431 gaga i saiBol1.JH378129 I 34 I 18 s cebCap1.NW_016107420v1 4100271 4 - 6311556 gaga i cebCap1.NW_016107420v1 I 3 I 18 s aotNan1.NW_018507635v1 14956956 4 + 15034901 agca i aotNan1.NW_018507635v1 I 38 I 18 s micMur3.chr14 26344492 4 - 93316391 gaga i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 979253 4 - 3201129 GAGA i otoGar3.GL873702 C 0 C 0 e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e chlSab2.chr7 79038836 0 + 135778131 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=967506.000000 s hg38.chr9_KI270719v1_random 81046 110 + 176845 ----ga----------------g--agagagagagagagagagGATAAAAGGTGAAAATCATGTGCCAAAACTAAAGAAAAGAGATGCTGACATTTGTGATTAAATAG----AATAATTGCACTATTTAAGATTAa s panTro5.chr4 135104633 108 + 194502333 ----ga----------------g--agagagagagagagag--GATAAAAGGTGAAAATCATGTGCCAAAACTAAAGAAAAGACATGCTGACATTTGTGATTAAATAG----AATAATTGCACTATTTAAGATTAa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55447 108 + 95358 ----ga----------------g--agagagagagagagag--GATAAAAGGTGAAAATCATGTGCCAAAACTAAAGAAAAGAGATGCTGACATTTGTGATTAAATAG----AATAATTGCACTATTTAAGATTAa i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449356 112 + 190429646 ----ga----------------g--agagagagagagagag--GATAAAAGGTGGAAATCATGTGCCAAAACTAAAGAAAAGAGATGCTGACGTTTGTGATTAAATAGAAACAATAATTTCAGTATTTAAGATTAa i rheMac8.chr5 I 28 C 0 s macFas5.chr5 130968360 112 + 189454096 ----ga----------------g--agagagagagagagag--GATAAAAGGTGGAAATCATGTGCCAAAACTAAAGAAAAGAGATGCTGACGTTTGTGATTAAATAGAAACAATAATTTCAGTATTTAAGATTAa i macFas5.chr5 I 28 C 0 s macNem1.NW_012010911v1 34960445 112 - 40319822 ----ga----------------g--agagagagagagagag--GATAAAAGGTGGAAATCATGTGCCAAAACTAAAGAAAAGAGATGCTGACGTTTGTGATTAAATAGAAACAATAATTTCAGTATTTAAGATTAa i macNem1.NW_012010911v1 I 22 C 0 s cerAty1.NW_012000798v1 4512144 112 - 9219162 ----ga----------------g--agagagagagagagag--GATAAAAGGTGGAAATCATGCGCCAAAACTAAAGAAAAGAGATGCTGACGTTTGTGATTAAATAGAAACAACAATTTCAGTATTTAAGATTAa i cerAty1.NW_012000798v1 I 28 C 0 s chlSab2.chr7 79038836 110 + 135778131 ----------------------g--agagagagagagagag--GATAAAAGGTGGAAATCATGTGCCAAAACTAAAGAAAAGAGATGCTGAAGTTTGCGATTAAATAGAAACAATAATTGCAGTATTTAAGATTAa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2814830 128 - 3013352 ----gagagagaaagagagagag--agagagagagagagag--GATAAAAGGTGGAAATCATGTGCCAAAACTAAAGAAAAGAGATGCTGACGTTTGTGATTAAATAGAAACAATAATTTCAGTATTTAAGATTAa i manLeu1.NW_012103277v1 I 28 C 0 s colAng1.NW_012114544v1 6037775 112 + 8656713 ----ga----------------g--agagagagagagagag--GATAAAAGGTGGAAATCATGTGCCAAAACTAAAGAAAAGAGATGCTGATGTTTGTGATTAAATAGAAACAATAATTGCAGTATTTAAGATTAa i colAng1.NW_012114544v1 I 6 C 0 s calJac3.chr3 129474052 112 - 190850796 ----ga----------------a--agagagagagaaagag--GATAAAAGCTGAAAACCATATGCCAAAACTAAAGAAAAGAGATGCTGACATTTGTGATTAAATAGAAAGAATAATTGCACTATTTACGATTAa i calJac3.chr3 I 18 C 0 s saiBol1.JH378129 6539265 112 - 25294431 ----ga----------------g--agagagagagaaagag--GATAAAAAGTGAAAATCATATGCCAAAACTAAAGAAAAGAGATGCTGGCATTTGTGATTAAACAGAAAGAATAATTGCACTATTTACAATTAa i saiBol1.JH378129 I 18 C 0 s cebCap1.NW_016107420v1 4100293 114 - 6311556 ----ga----------------gaaagagagagagaaagag--GATAAAAGGCGAAAATCATATGCCAAAACTAAAAAAACGAGATGCTGACATTTGTGATTAAATAGAAAGAATAATTGCACTATTTACAATTAa i cebCap1.NW_016107420v1 I 18 C 0 s aotNan1.NW_018507635v1 14956978 114 + 15034901 ----ga----------------gaaagagggagagaaagag--GATAAAAGGTGAAAATCATATGCCAAAACTAAAGAAAAGAGATGCTGACATTTGTGATTAAATAGAAAGAATAATTGCACTATTTACGATTAa i aotNan1.NW_018507635v1 I 18 C 0 s micMur3.chr14 26344496 114 - 93316391 g--aga----------------g--agagaaagagaCCAAG--AATAAACAGTGAAAATCACTTGCCAAAACTACAGAAGAAAGATGCTGGAATTTGATATTAAATAGAAAGAATAATTGTACTAGTTAAGATTAA i micMur3.chr14 C 0 I 1567 s otoGar3.GL873702 979257 116 - 3201129 GGCAGT----------------G--AGAGAGAGGGGAGGGG--GGTAATCAGTGAAAATCATGTGCCTAAAATACAAAAGAGAGATGCTGAAATGTGTCACTGAATTGAAAAAATAACTGCACTATTCAAGATTAA i otoGar3.GL873702 C 0 C 0 e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=2091042.000000 s hg38.chr9_KI270719v1_random 81156 320 + 176845 tcacttgagcctgggaggtggaggctgtagtgagtcatcatggtgccactgcattccagcctgcatgacagagagagactctgtctta-ggaaa--------aaaaaaaaa---------TTAAGGTGGT-CCAGAATGCACCCAAGGATAAA--------ATGCAAAGATGATCTTGCCCCATGTATGTTTTAGCATACTACTTAGGTACTATTTATTTTTTAATTATCTCCTTTTTACATTTTGACAATTTTATCCCAGTGGTCAAGCCTTGTATTAG---------Aaaa--gacagaaagaaggaaaagaaagaaggcaggaaggaaggcaaggggaa----------ggaaaggaagtggaag s panTro5.chr4 135104741 332 + 194502333 tcacttgagcctgggaggtggaggctgtagtgagtcatcatggtgccactgcattccagcctgcatgacagagagagagtctgtctta-ggaaa--------aaaaaaaaa-----aaGATTAAAGTGGT-CCAGAATGCACCCAAGGATAAA--------ATGCAAAGATTATCTTGCCCCATGTATATTTTAGCATACTACTTAGGTACTATTTATTTTTTAATTATCTCCTTTTTACATTTTGACAATTTTACCCCAGTGGTCAAGCCTTGTATTAG---------AAAA--GACA--aagaagggaaagaaagaaggcaggaaggaaggcaaggggaaagaaggggaaggaaaggaagtggaag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55555 332 + 95358 tcacttgagcctgggaggtggaggctgtagtgagtcatcatggtgccaccgcattccagcctgcatgacaga-agagactctgtctta-ggaaa--------aaaaaaaaa------agaTTAAGGTGGT-CCAGAATGCACCCAAGGATAAA--------ATGCAAAGATGATCTTGCCCCATGTATATTTTAGCATACTACTTAGGTACTATTTATTTTTTAATTATCTCCTTTTTACATTTTGACAATTTTACCCCAGTGGTCAAGCCTTGTATTAG---------Aaaa--gacagaaagaaggaaaagaaagaaggcaggaaggaaggcaaggggaaagaaggggaaggaaaggaagtggaag i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449468 353 + 190429646 tcacttgagcctgggagatggaggctgtagtgagacatcatggtgccactgcattccagtctgtgtgacagagagagactctgtctta-gggag--------aaaaaaaaaaaaaaaaaaTTAAGGTGGT-CCAGAATGCACTCAAGGATAAAATACAAAGATACAAAGATTATCTTGCTCTGTGTATATTTTAGCATACCACTTAGGTACTATTTATTTTTTAATTATCTTCTTTTTACATTTTAACAATTTTACCTCAGTGGTCAAGCCTTGTATTACaa---aaaaaaaa--aacagaaagaaggaaaagaaagaaggcaggaaggaaggcaaggggaaagaaggggaaggaaaggaagtggaag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968472 358 + 189454096 tcacttgagcctgggagatggaggctgtagtgagacatcatggtgccactgcattccagtctgtgtgacagagagagactctgtctta-gggag------aaaaaaaaaaaaaaaaaaaaTTAAGGTGGT-CCAGAATGCACTCAAGGATAAAATACAAAGATACAAAGATTATCTTGCTCTGTGTATATTTTAGCATACCACTTAGGTACTATTTATTTTTTAATTATCTTCTTTTTACATTTTAACAATTTTACCTCAGTGGTCAAGCCTTGTATTACaaaaaaaaaaaaa--aacagaaagaaggaaaagaaagaaggcaggaaggaaggcaaggggaaagaaggggaaggaaaggaagtggaag i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960557 340 - 40319822 tcacttgagcctgggagatggaggctgtagtgagacatcatggtgccactgcattccagtctgtgtgacagagagagactctgtctta-GGGAGaaaaaaaaaaaaaaaaaaaaaaaaaaTTAAGATGGT-CCAGAATGCACTCAAGGATAAAATACAAAGATACAAAGATTATCTTGCTCTGTGTATATTTTAGCATACCACTTAGGTACTATTTATTTTTTAATTATCTTCTTTTTACATTTTAGCAATTTTACCTCag------------------------aaaaaaaa--aacagaaagaaggaaaagaaagaaggcaggaaggaaggcaaggggaaagaaggggaaggaaaggaagtggaag i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4512256 352 - 9219162 tcacttgagcctgggagatggaggctgtagtgagacatcatggtgccactgcattccagtctgtgtgacagagagagcctctgtctta-gggag---------aaaaaaaaaaaaaaaGATTAAGGTGGT-CCAGAATGCACACAAGGATAAAATACAAAGATACAAAGATTATCTTGCTCTGTGTATATTTTAGCATACCACTTAGGTACTATTTATTTTTTAATTATCTTCTTTTTACATTTTAACAATTTTACCTTAGTGGTCAAGCCTTGTATTagaa---aaaaaaaa--aacagaaagaaggaaaagaaagaaggcaggaaggaaggcaaggggaaagaagggaaaggaaaggaagtggaag i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79038946 349 + 135778131 tcacttgagcctg------ggaggctgtagtgagccatcatggtgccactgcattccagtctgtgtgacagaaagagactctgtctta-ggggt--------aaaaaaaaaaaaaaaa-aTTAAGGTGGT-CCAGAATGCACCCAAGGATAAAATACAAAGATACAAAGATTATCTTGCTCTGTGTATATTTTAGCATACCACTTAGGTACTATTTATTTTTTAATTAGCTTCTTCTTACATTTTAACAATTTTACCTCAGTGGTCAAGCCTTGTATTAGaaaaaaaaaaaaa--aacagaaagaaggaaaagaaagaaggcaagaaggaaggcaagGGGAAAGAAGGGGAAGGAAAGGAAGTGGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2814958 351 - 3013352 tcacttgagcctgggagatggaggctgtagtgagacatcatggtgccactgcattccagtctgtgtgacagagagagactctgtctta-ggggg--------aaaaaaaaaaaaaaaaGATTAAGGTGGT-CCAGAATGCACCCAAGGATAAAATACAAAGATACAAAGATTATCTTGCTCTGTGTATATTTTAGCATACCACTTAGGTACTATTTATTTTTTAATTATCTTCTTTTTACATTTTAACAATTTTACCTCAGTGGTCAAGCCTTGTATTag-----aaaaaaaa--aacagaaagaaggaaaagaaagaaggcaggaaggaaggcaaggggaaagaaggggaagtaaaggaagtggaag i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6037887 349 + 8656713 tcacttgagcttgggagatggaggctgtagtgagccatcatggtgccactgcattccagtctgtgtgacagagagagactctggcttacggggg--------gaaaaaaaaaaaaaaaGATTAAGGTGGT-CCAGAATGCACCCAAGGATAAAATACAAAGATACAAAGATTATCTTGCTCTGTATATATTTTAGCATACCACTTAGGTAGTATTTATTTTTTAATTATCTTCTTTTTACATTTTAACAATTTTACCCCAGTAGTCAAGCCTTGTATTag-----aaaaaaat--aacagaaagaaggaa---aaacaagggaggaaggaaggcaaggggaaagaaGGGGAAGGAAAAgaagtggaag i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474164 323 - 190850796 tcacttgggcctggg-ggtggaagctgtagtaagccatcatgatgtcactgccttccagcctgggtg--acagagagactctgtctta-gggga----------aaaaaaaaaaaaaaGATTAATGTCGT-CTAGAATGCACCC-TGGATAAA--------ATGCAAAGATTACCTTGT-CCGTGTATATTTTAGCATACCACTTAAGTACTATTTATTTTTTAATTATCTCCTTTTTATATTTTGACAATTTTACCCCAATGGTCAAGCCTTGTATAAG---------AAAA--GACAGAAAGAAGGAAAAGAAAGAAGGCAggaaggga------gggaaagaaagggaag---aggaaggggaag i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6539377 322 - 25294431 tcacttgagcctgggaggtggaaactgtagtaagccatcatgatgttactgccttccagcgtgggtgacacagagagactctgtctta-GGGG-----------------GGAAAAAAGATTAATGTCTT-CCAGAATGCACCC-CGGATAAA--------ATGCAAAGGTTATCTCGTCCCGGGCATATTTTAGCATACCACTTAGGTACTATTTATTTTTTAATGATCTCCTTTTTATGTTTTGACAATTTTACTCCAGTGGTCAAGCCTTGTATAAG---------AAAAATAACAGAAAGAAGGAAAAGAAAGAAGGCAggaaggga------gggaaaggaagggaag---aagaagggcaag i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4100407 325 - 6311556 tcacttgagcctgggaggtggaagctgtagtaagccatcatgatgtcactgccttccagcctgggtgacagagagagactctgtctta-gggg-----------aaaaataaaaaaaaGATTAATGTCAT-CCAGAATGCACCT-TGGATAAA--------ATGCAAAGATTATCTTGTCCCATGTATATTTT-GCATACCACTTAGGTAGTATTTATTTCTTAATTATCTCCTTTTTATGTTTTGACAATTTTACCCCAATGGTCAAGACTTGTATTAG---------Aaaa--gacagaaagaaggaaaagaaagaaggcagggaggga------gggaaaggaagggaag---aggaaggggaag i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14957092 319 + 15034901 tcacttgagcctaggaggtggaagctgtagtaagcgatcatgatgtcactgccttccagccttggtg--acagagagagactgtctta-gggg-------------gaaaaaaaaaaaGATTAATGTCAT-CCAGAATGTACCC-TGGGTAAA--------ATGCAAAGATTATCTTGTCCCATGTATATTTTAGCACACCACTTAGGTACTATTTATTTTTTAATTATCTCCTTCTTATGTTTTGATAATTTTACCCCAATGGTCAAGACTTGTATaag---------aaaa--gacagaaagaagaagaagaaagaaggcaggaagggt------gggaaaggaagggaa------gaaggagaag i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 979373 186 - 3201129 ----------------------------------------------------------------------------------------------------------------------------GGTGGTGGCAGAATGCATCC-AGAGTAAC---------------TATTATCTTCCCC--------TCCCCGCTTA-----TAAATGTTGCTGATTTTTCATTTCTCTCCTTTTTTTTTT-----AACTTTGACCCGACAATCAAGCTTTATATTAG---------AAAA--AGATGAAAAATGGA---GAAAGACGGCAAAGAGCGGGGGAAGGAAGAAGAGAAGGAATTAAAG---------- i otoGar3.GL873702 C 0 I 786 e micMur3.chr14 26344610 1567 - 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=-12240.000000 s hg38.chr9_KI270719v1_random 81476 2 + 176845 g-g s panTro5.chr4 135105073 2 + 194502333 g-g i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55887 1 + 95358 g-- i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449821 2 + 190429646 g-g i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968830 2 + 189454096 g-g i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960897 2 - 40319822 g-g i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4512608 2 - 9219162 g-g i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79039295 2 + 135778131 G-G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2815309 2 - 3013352 g-g i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6038236 2 + 8656713 g-g i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474487 1 - 190850796 g-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6539699 1 - 25294431 g-- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4100732 1 - 6311556 g-- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14957411 2 + 15034901 gg- i aotNan1.NW_018507635v1 C 0 I 35 e micMur3.chr14 26344610 1567 - 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 979559 786 - 3201129 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=101000.000000 s hg38.chr9_KI270719v1_random 81478 36 + 176845 aag-------------------------gggaag----agaaggggaagagaaggggaggggaag---- s panTro5.chr4 135105075 36 + 194502333 aag-------------------------gggaag----ggaaggggaagagaaggggaggggaag---- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55888 26 + 95358 ---------------------------------------gaaggggaagagaaggggaggggaag---- i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449823 50 + 190429646 aag---------------gggaagggaagggaaggaaaggaaagggaaggcaagaggaagggaag---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968832 50 + 189454096 aag---------------gggaagggaagggaagggaaggaaagggaaggcaaggggaagggaag---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960899 65 - 40319822 aaggggaagggaaaggaagggaagggaagggaagggaagggaagggaaggcaaggggaagggaag---- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4512610 49 - 9219162 aag---------------gggaagggaagggaagggaaggaaagggaaggcaaggggaaggg-ag---- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79039297 40 + 135778131 AAG-------------------------GGGAAGGGAAGAAAGGGGAAGGCAAGGGGAAGGGAAG---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2815311 50 - 3013352 aag---------------gggaagggaagggaagggaaggaaagggaaggcaaggggaagggaag---- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6038238 40 + 8656713 aag-------------------------gggaagggaaggaaggtgaaggcaagaggaagggaag---- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474488 35 - 190850796 ----------------------------------aggaatgggggaaaggcaaaggaaaggagaagaag i calJac3.chr3 C 0 I 4 s saiBol1.JH378129 6539700 35 - 25294431 ----------------------------------gagaagaggggaaaggcaagagaaaggaggagacg i saiBol1.JH378129 C 0 I 4 s cebCap1.NW_016107420v1 4100733 35 - 6311556 ----------------------------------gtggaaaggggaaaggcaagagaaaggaggagaag i cebCap1.NW_016107420v1 C 0 I 4 e micMur3.chr14 26344610 1567 - 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 979559 786 - 3201129 I e aotNan1.NW_018507635v1 14957413 35 + 15034901 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=9100.000000 s hg38.chr9_KI270719v1_random 81514 1 + 176845 g s panTro5.chr4 135105111 1 + 194502333 g i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55914 1 + 95358 g i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449873 1 + 190429646 g i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968882 1 + 189454096 g i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960964 1 - 40319822 g i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4512659 1 - 9219162 g i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79039337 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2815361 1 - 3013352 g i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6038278 1 + 8656713 g i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474527 1 - 190850796 g i calJac3.chr3 I 4 C 0 s saiBol1.JH378129 6539739 1 - 25294431 g i saiBol1.JH378129 I 4 C 0 s cebCap1.NW_016107420v1 4100772 1 - 6311556 g i cebCap1.NW_016107420v1 I 4 C 0 s aotNan1.NW_018507635v1 14957448 1 + 15034901 g i aotNan1.NW_018507635v1 I 35 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e dasNov3.JH569232 1788628 25244 + 5974691 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 979559 786 - 3201129 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=36200.000000 s hg38.chr9_KI270719v1_random 81515 6 + 176845 ggaggg- s panTro5.chr4 135105112 6 + 194502333 ggacag- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 55915 6 + 95358 ggaggg- i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449874 6 + 190429646 agaggg- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968883 6 + 189454096 agaggg- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960965 6 - 40319822 agaggg- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4512660 6 - 9219162 agaggg- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79039338 6 + 135778131 AGAGGG- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2815362 6 - 3013352 agaggg- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6038279 6 + 8656713 AGAGAG- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474528 6 - 190850796 ggaggg- i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6539740 6 - 25294431 ggaggg- i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4100773 6 - 6311556 ggaggg- i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14957449 6 + 15034901 ggaggg- i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1813872 6 + 5974691 -GAAGCA i dasNov3.JH569232 I 25244 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e canFam3.chr19 44070355 5271 - 53741614 I e otoGar3.GL873702 979559 786 - 3201129 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=1644504.000000 s hg38.chr9_KI270719v1_random 81521 205 + 176845 gaggggaaAC--GTTGCTTTGGACAGAATAAATGGGTAAGGG--TTTCTATTttaattagattaagatta-----attagattaAA--CCTCTGAGGAAGTCTTACTTGAGCTGAGAAACTAAATATGAGAGGGAGGAGTA--CCACTGCATTGGTTATAGATGGGGTAGAAGTC--TACAAAAGAGTTCATTGAGGAATAGAGTAGTAAATAAGTGACT s panTro5.chr4 135105118 207 + 194502333 gaGGGGAAACATGTTGCTTTGGACAGAATAAATGGGTAAGGG--TTTCTATTttaattagattaagatta-----attagattaAA--CCTCTGAGGAAGTCTTACCTGAGCTGAGAAATTAAATATGAGAGGGAGGAGTA--CCACTGCATTGGTTATAGATGGGGTAGAAGTC--TACAAAAGAGTTCATTGAGGAATAGAGTAGTAAATAAGTGACT i panTro5.chr4 C 0 I 3 s gorGor5.CYUI01000801v1 55921 205 + 95358 gaggggaaAC--GTTGCTTTGGACAGAATAAATGGGTAAGGG--TTTCTATTttaattagattaagatta-----attagattaAA--CCTCTGAGGAAGTCTTACTTGAGCTGAGAAACTAAATATGAGAGGGAGGAGTA--CCACTGCATTGGTTATAGATGGGGTAGAAGTC--TACAAAAGAGTTCATTGAGGAATAGAGTAGTAAATAAGTGACT i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131449880 207 + 190429646 gaggggaaACATGTTGTTTTGGACAGAATAAATGGGTAAGGG--TTTATATTttaattagattaatgttg-----attagattaaa--tCTCTGAGGAAGTCTTACTTGAGCTGAGAAACTAAATATGAGCGGGAGGAGTA--CCACTGCATTggttataggtagggtagaagtc--tacaaaagagttcattgtggaatagagtagtaaataaatgact i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130968889 207 + 189454096 gaggggaaACATGTTGTTTTGGACAGAATAAATGGGTAAGGG--TTTATATTttaattagattaatgttg-----attagattaaa--tCTCTGAGGAAGTCTTACTTGAGCTGAGAAACTAAATATGAGCGGGAGGAGTA--CCACTGCATTGGTTATAGGTAGGGTAGAAGTC--TACAAAAGAGTTCATTGTGGAATAGAGTAGTAAATAAATGACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34960971 207 - 40319822 gaggggaaACATGTTGTTTTGGACAGAATAAATGGGTAAGGG--TTTATATTttaattagattaatgttg-----attagattaaa--tCTCTGAGGAAGTCTTACTTGAGTTGAGAAACTAAATATGAGCAGGAGGAGTA--CCACTGCATTggttataggtagggtggaagtc--tacaaaagagttcattgtggaatagagtagtaaataaatgact i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4512666 206 - 9219162 ga-gggaaACATGTTGCTTTGGACAGAATAAATGGGTAAGGG--TTTATATTttaattagattaatgttg-----attagattaaa--tCTCTGAGGAAGTCTTACTTGAGCTGAGAAACTAAATATGAGCGGGAGGAGTA--CCACTGCATTggttataggtagggtagaagtc--tacaaaagagttcattgtggaatacagtagtaaataaatgact i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79039344 207 + 135778131 GAGGGGAAACATGTTGCTTTGGACAGAATAAATGGGTAAGGG--TTTATATTTTAATTAGATTAATGTTA-----ATTAGATGAAA--TCTCTGAGGAAGTCTTACCTGAGCTGAGAAACTAAATATGAGCGGGAGGAGTA--CCACTGCATTGGTCATAGGTAGGGTAGAAGTC--TACAAAAGAGTTCATTGTGGAATAGAGTAGTAAATAAATGACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2815368 206 - 3013352 ga-gggaaACATGTTGCTTTGGACAGAATAAATGGGTAAGGG--TTTATATTttaattagattaatgttg-----attagattaaa--tCTCTGAGGAAGTCTTACTTGAGCTGAGAAACTAAATATGAGCGGGAGGAGTA--CCACTGCATTggttataggtagggtagaagtc--tacaaaagagttcattgtggaatacagtagtaaataaatgact i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6038285 207 + 8656713 AAGGGGAAACATGTTGCTTTGGACAGAATAAATGGGTAAGGG--TTTATATTTTAATTAGATTAATGCTA-----ATTAGATTAAA--TCTCTGAGGAAGTCTTACTTGAGCTGAGAAACTAAATATGAGCGGGAGGAGTA--CCACTGCATTggttataggtggtgtacaagtc--tacaaaagagttcattgtggaatagagtagtaaataaatgact i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474534 204 - 190850796 aagggaag------TATTTTGGACAGAACAAATAAGTAAAGG--GTGATA-TTTAATTAGGTTAATATTGGATTAATTAGATTAAA---TTCTGAGGAAGTCTTATTTGAGCTGAGAAACTAAATATGAGAGGGAAGAGAA--CCTCTGCATTGGTTATAGGTGGAGTAGAGGTC--TACAAAAGAATTCATTGAGGAATAGAGTAGTAAATAAATGACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6539746 204 - 25294431 aagggaag------TATTTTGCACAGAATAAATGGGTAAAGG--GTGATA-TTTAATTAGGTTAATATTGGATTAATTAGATTAAA---CTCTGAGGAAGTCTTATTTGAGGTGAGAAACTAAATATGATAGGGAAGAGTA--CCTCTGCATTGGTTATAGGTGGGGTAGAAGTC--TACAGAAAAATTCATTGAAGAATAGAGTAGTTAATAAATGATT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4100779 203 - 6311556 aagggaag------TATTTTGGACAGAATACATGGGTAAAGG--GTGACA-TTTAATTAGGTTAATATTGGATTAATTAGATTAAA---CTCTGAGGAAGTCTTATTTGAGCCGAGAAACTAAATATGAGAGGGAAGAGT---CCTCTGCATTggttacaggtgggataaaagtc--tacagaagaattcattgaggaatagagtagtaaataaatgact i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14957455 204 + 15034901 aagggaag------TATTTTGGACAGAATAAATGGGTAAAGG--GTGACA-TTTAATTAGGTTAATATTGGATTAATTAGATTAAA---CTCTGAGGAAGTCTTATTTGAGCTGAGAAACTAAATATGAGAGGGAAGAGTA--CTTCTgtattggttataggtggggtagaagtc--tacagaagaattcatggaggaacagagtagtaaataaatgact i aotNan1.NW_018507635v1 C 0 C 0 s canFam3.chr19 44075626 213 - 53741614 --GAAAAAACATGTCTTCTTAGAAAGAATACATGAGTAAGGGGTTTTATATTTTTATTGGATTAAGATTATATTAATTAGAGCAAG--CATCTAAGGAAATCTTACTTG-GTCGAGAAACTAAAGATAGAAGAATACTGTG--CCACTGTATTGACTGTGGGTGGGACAGAGGTCTTTGCAAAAGAGTTCATTGAAGGATAGAGTAGTAAATAAATGGCT i canFam3.chr19 I 5271 C 0 s dasNov3.JH569232 1813878 203 + 5974691 --GAAAAAGCATGCTGTTTTGGAGTGAATAAATGTGGATAGG--GTTAACTTTTAGTTAGATTA-----------GTCAAATGACATATCTCTAACGGAGACTTATTTAAGCTGATAAACCAATGATGAAGGGGAAGAGCATGCCACTGTACTAACTATAGCTGATATAGAAGAT--TGTACAAGAGTTCATTGAGGGAAAGAATAGTAAATAAATGGCT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e otoGar3.GL873702 979559 786 - 3201129 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=2784.000000 s hg38.chr9_KI270719v1_random 81726 5 + 176845 TAATG s panTro5.chr4 135105328 5 + 194502333 TAATG i panTro5.chr4 I 3 C 0 s gorGor5.CYUI01000801v1 56126 5 + 95358 TAATG i gorGor5.CYUI01000801v1 C 0 C 0 s macNem1.NW_012010911v1 34961178 5 - 40319822 taatg i macNem1.NW_012010911v1 C 0 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e dasNov3.JH569232 1814081 0 + 5974691 C e canFam3.chr19 44075839 0 - 53741614 C e otoGar3.GL873702 979559 786 - 3201129 I e aotNan1.NW_018507635v1 14957659 0 + 15034901 C e cebCap1.NW_016107420v1 4100982 0 - 6311556 C e saiBol1.JH378129 6539950 0 - 25294431 C e calJac3.chr3 129474738 0 - 190850796 C e colAng1.NW_012114544v1 6038492 0 + 8656713 C e manLeu1.NW_012103277v1 2815574 0 - 3013352 C e chlSab2.chr7 79039551 0 + 135778131 C e cerAty1.NW_012000798v1 4512872 0 - 9219162 C e macFas5.chr5 130969096 0 + 189454096 C e rheMac8.chr5 131450087 0 + 190429646 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=681.000000 s hg38.chr9_KI270719v1_random 81731 7 + 176845 AGTTTGT s panTro5.chr4 135105333 7 + 194502333 AGTTTGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 56131 5 + 95358 AG--TGT i gorGor5.CYUI01000801v1 C 0 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e dasNov3.JH569232 1814081 0 + 5974691 C e canFam3.chr19 44075839 0 - 53741614 C e otoGar3.GL873702 979559 786 - 3201129 I e aotNan1.NW_018507635v1 14957659 0 + 15034901 C e cebCap1.NW_016107420v1 4100982 0 - 6311556 C e saiBol1.JH378129 6539950 0 - 25294431 C e calJac3.chr3 129474738 0 - 190850796 C e colAng1.NW_012114544v1 6038492 0 + 8656713 C e manLeu1.NW_012103277v1 2815574 0 - 3013352 C e chlSab2.chr7 79039551 0 + 135778131 C e cerAty1.NW_012000798v1 4512872 0 - 9219162 C e macNem1.NW_012010911v1 34961183 0 - 40319822 C e macFas5.chr5 130969096 0 + 189454096 C e rheMac8.chr5 131450087 0 + 190429646 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=94294.000000 s hg38.chr9_KI270719v1_random 81738 308 + 176845 ggctgggcgcagtggctcaaacgtgtaatcccagcactttggaaggccgaggcgggcggatcacgaggtcaggggatcaagaccatcctggctaacacggtgaaaccccgtctctact---aaacaaaatacaagaaattagccgggcatggtggcgggagcctgcagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggaggttgcagtgagccaagatcacggcactgcactccagcctgggggat-----------------------------------agagcgaga-ctctgtctcca----------aaaaa-------aataaaa------taa---aataaaa s panTro5.chr4 135105340 298 + 194502333 ggccgggcgtagtggctcaagcctgtaatccctgcactttgggaggccgaggcgggcggatcacgaggtcaggagatcaagaccatcgtggctaacacggtgaaaccccgtctctact---aaacaaaatacaaaaaattagccgggcatggtggcgggagcctgcagtcccagctagtcgggaggctgaggcaggagaatggcgtgaacccgggaggcagaggttgcagtgagccaagatcgcgccactacactccagcctgggcgat-----------------------------------agagcgaga-ctctgtctcca----------aaaaa-------aataaat------------------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 56136 317 + 95358 ggccgggcgcagtggctcaaacgtgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggggatcaagaccatcctggctaacacggtgaaaccccgtctctact---aaacaaaatacaagaaattagccgggcatggtggcgggagcctgcagtcccagctactcgggaggctgaggcaggagaatggc-tgaacccgggaggcggaggttgcagtgagccaagatcgcgccactacactccagcctgggcgat-----------------------------------agagcgaga-ctgtgtctcca----------aaaaaaaataataataaaa------taaaataataaaa i gorGor5.CYUI01000801v1 C 0 C 0 s otoGar3.GL873702 980345 364 - 3201129 ggccagatgtagtggctcacacctgtaattctgtcattcagggagattgagagtattgcctc---agttcaagagttcaagacccagctgagcaata--gtgagaccctgtctctactgtgaaaatagaaacaa-aaactagttagacacagtggcacatgtctatagtcccaactacttgggagacagaggcaagaggagtacttggacccaagagtttgataatgctgtgatccatgatgatgcctgggcactctatccagtgagatcttgtttcaaataaaataacaaacaaaCAAACAAAAGAACACAATCTTTATCTTCACAGTGGAAGTAGAAAACACACAAATAAACATATCTTTAAACAATA--- i otoGar3.GL873702 I 786 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e dasNov3.JH569232 1814081 0 + 5974691 C e canFam3.chr19 44075839 0 - 53741614 C e aotNan1.NW_018507635v1 14957659 0 + 15034901 C e cebCap1.NW_016107420v1 4100982 0 - 6311556 C e saiBol1.JH378129 6539950 0 - 25294431 C e calJac3.chr3 129474738 0 - 190850796 C e colAng1.NW_012114544v1 6038492 0 + 8656713 C e manLeu1.NW_012103277v1 2815574 0 - 3013352 C e chlSab2.chr7 79039551 0 + 135778131 C e cerAty1.NW_012000798v1 4512872 0 - 9219162 C e macNem1.NW_012010911v1 34961183 0 - 40319822 C e macFas5.chr5 130969096 0 + 189454096 C e rheMac8.chr5 131450087 0 + 190429646 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=546.000000 s hg38.chr9_KI270719v1_random 82046 1 + 176845 t s gorGor5.CYUI01000801v1 56453 1 + 95358 t i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr4 136965436 1 + 198332218 t i ponAbe2.chr4 N 0 N 0 s otoGar3.GL873702 980709 1 - 3201129 T i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e dasNov3.JH569232 1814081 0 + 5974691 C e canFam3.chr19 44075839 0 - 53741614 C e aotNan1.NW_018507635v1 14957659 0 + 15034901 C e cebCap1.NW_016107420v1 4100982 0 - 6311556 C e saiBol1.JH378129 6539950 0 - 25294431 C e calJac3.chr3 129474738 0 - 190850796 C e colAng1.NW_012114544v1 6038492 0 + 8656713 C e manLeu1.NW_012103277v1 2815574 0 - 3013352 C e chlSab2.chr7 79039551 0 + 135778131 C e cerAty1.NW_012000798v1 4512872 0 - 9219162 C e macNem1.NW_012010911v1 34961183 0 - 40319822 C e macFas5.chr5 130969096 0 + 189454096 C e rheMac8.chr5 131450087 0 + 190429646 C e nomLeu3.chr7b 90491342 0 - 115148730 C e panTro5.chr4 135105638 0 + 194502333 C a score=-390.000000 s hg38.chr9_KI270719v1_random 82047 7 + 176845 aataa---aa s panTro5.chr4 135105638 2 + 194502333 --------aa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 56454 10 + 95358 aataaaataa i gorGor5.CYUI01000801v1 C 0 C 0 s otoGar3.GL873702 980710 10 - 3201129 GCTAAATTTA i otoGar3.GL873702 C 0 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e dasNov3.JH569232 1814081 0 + 5974691 C e canFam3.chr19 44075839 0 - 53741614 C e aotNan1.NW_018507635v1 14957659 0 + 15034901 C e cebCap1.NW_016107420v1 4100982 0 - 6311556 C e saiBol1.JH378129 6539950 0 - 25294431 C e calJac3.chr3 129474738 0 - 190850796 C e colAng1.NW_012114544v1 6038492 0 + 8656713 C e manLeu1.NW_012103277v1 2815574 0 - 3013352 C e chlSab2.chr7 79039551 0 + 135778131 C e cerAty1.NW_012000798v1 4512872 0 - 9219162 C e macNem1.NW_012010911v1 34961183 0 - 40319822 C e macFas5.chr5 130969096 0 + 189454096 C e rheMac8.chr5 131450087 0 + 190429646 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=-900.000000 s hg38.chr9_KI270719v1_random 82054 6 + 176845 ta--------------------------ataa s panTro5.chr4 135105640 6 + 194502333 ta--------------------------ataa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 56464 6 + 95358 ta--------------------------ataa i gorGor5.CYUI01000801v1 C 0 C 0 s otoGar3.GL873702 980720 32 - 3201129 TAAGGCTTAAGTACATGTTATTTTGGAGAGAA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1814081 6 + 5974691 TC--------------------------ATAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e canFam3.chr19 44075839 0 - 53741614 C e aotNan1.NW_018507635v1 14957659 0 + 15034901 C e cebCap1.NW_016107420v1 4100982 0 - 6311556 C e saiBol1.JH378129 6539950 0 - 25294431 C e calJac3.chr3 129474738 0 - 190850796 C e colAng1.NW_012114544v1 6038492 0 + 8656713 C e manLeu1.NW_012103277v1 2815574 0 - 3013352 C e chlSab2.chr7 79039551 0 + 135778131 C e cerAty1.NW_012000798v1 4512872 0 - 9219162 C e macNem1.NW_012010911v1 34961183 0 - 40319822 C e macFas5.chr5 130969096 0 + 189454096 C e rheMac8.chr5 131450087 0 + 190429646 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=2571.000000 s hg38.chr9_KI270719v1_random 82060 3 + 176845 taa s panTro5.chr4 135105646 3 + 194502333 taa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 56470 3 + 95358 taa i gorGor5.CYUI01000801v1 C 0 C 0 s otoGar3.GL873702 980752 3 - 3201129 TAA i otoGar3.GL873702 C 0 I 24 s canFam3.chr19 44075839 3 - 53741614 TCA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1814087 3 + 5974691 TGA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e aotNan1.NW_018507635v1 14957659 0 + 15034901 C e cebCap1.NW_016107420v1 4100982 0 - 6311556 C e saiBol1.JH378129 6539950 0 - 25294431 C e calJac3.chr3 129474738 0 - 190850796 C e colAng1.NW_012114544v1 6038492 0 + 8656713 C e manLeu1.NW_012103277v1 2815574 0 - 3013352 C e chlSab2.chr7 79039551 0 + 135778131 C e cerAty1.NW_012000798v1 4512872 0 - 9219162 C e macNem1.NW_012010911v1 34961183 0 - 40319822 C e macFas5.chr5 130969096 0 + 189454096 C e rheMac8.chr5 131450087 0 + 190429646 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=36962.000000 s hg38.chr9_KI270719v1_random 82063 5 + 176845 taata s panTro5.chr4 135105649 5 + 194502333 taata i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 56473 5 + 95358 taata i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131450087 5 + 190429646 taata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130969096 5 + 189454096 TAATA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4512872 5 - 9219162 taata i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79039551 5 + 135778131 TAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2815574 5 - 3013352 taata i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6038492 5 + 8656713 taata i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474738 5 - 190850796 TAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6539950 5 - 25294431 TAATA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4100982 5 - 6311556 taata i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14957659 5 + 15034901 taata i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 980779 5 - 3201129 TTAGA i otoGar3.GL873702 I 24 C 0 s canFam3.chr19 44075842 5 - 53741614 TAATG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1814090 4 + 5974691 CAAT- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e macNem1.NW_012010911v1 34961183 0 - 40319822 C e nomLeu3.chr7b 90491342 0 - 115148730 C a score=913143.000000 s hg38.chr9_KI270719v1_random 82068 115 + 176845 atGAGTTTGTATT------------------GTTCTTATTTT------------------------------------------------------------------------------------------------------------------------------------------------G---CAAAAGAATGCAAGATCTGGGTAG--------------AGAAAGGGCAAGAGG------GAGGACTTCCCAGACTGAATCAATAATATTAACAGTATCAATCTGCCACTA s panTro5.chr4 135105654 113 + 194502333 atG--TTTGTATT------------------GTTCTTATTTT------------------------------------------------------------------------------------------------------------------------------------------------G---CAAAAGTATGCAAGATCTGGGTAC--------------AGAAAGGGCAAGAGG------GAGGACTTCCCATATTGAATCAATAATATTAACAGTATCAATCTGCCACTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 56478 115 + 95358 atGAGTTTGTATT------------------GTTCTTATTTT------------------------------------------------------------------------------------------------------------------------------------------------G---CAAAAGAATGCAAGATCTGGGTAG--------------AGAAAGGGCAAGAGG------GAGGACTTCCCAGATTGAATCAATAATATTAACAGTATCAATCTGCCACTA i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131450092 115 + 190429646 atgagtttgtatt------------------gttcttatttt------------------------------------------------------------------------------------------------------------------------------------------------g---aaaaagtatgcaagatccggatag--------------agaaagggtaagagg------gaggacttcccagATTGAATCAATAATATTAACAGTATCAATCTGCCATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130969101 115 + 189454096 ATGAGTTTGTATT------------------GTTCTTATTTT------------------------------------------------------------------------------------------------------------------------------------------------G---AAAAAGTATGCAAGATCCGGATAG--------------AGAAAGGGTAAGAGG------GAGGACTTCCCAGATTGAATCAATAATATTAACAGTATCAATCTGCCATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34961183 115 - 40319822 atgagtttgtatt------------------gttcttatttt------------------------------------------------------------------------------------------------------------------------------------------------g---aaaaagtatgcaagatccggatag--------------agaaagggtaagagg------gaggacttcccagATTGAATCAATAATATTAACAGTATCAATCTGCCATTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4512877 115 - 9219162 atgagtttgtatt------------------gttcttatttt------------------------------------------------------------------------------------------------------------------------------------------------g---aaaaagtatgcacgatccggatag--------------agaaagggtaagagg------gaggacttcccagATTGAATCAATAATATTAACAGTATCAATCTGCCATTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79039556 115 + 135778131 ATGAGTTTGTATT------------------GTTCTTATTTT------------------------------------------------------------------------------------------------------------------------------------------------G---AAAAAGTATGCACGATCTGGATAG--------------AGAAAGGGTAAGAGG------GAGGACTTCCCAGACTGATTCAATAATATTAACAGTATCAATCTGCCATTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2815579 115 - 3013352 atgagtttgtatt------------------gttcttatttt------------------------------------------------------------------------------------------------------------------------------------------------g---aaaaagtatgcacgatccggatag--------------agaaagggtaagagg------gaggacttcccagATTGAATCAATAATATTAACAGTATCAATCTGCCATTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6038497 115 + 8656713 atgagtttgtatt------------------gttcttatttt------------------------------------------------------------------------------------------------------------------------------------------------g---aaaaagtatgcaagatccggatag--------------agaaagggcaagagg------gaggacttcccagATTGAATCAATAATATTAACAGTATCAATCTGCCATTA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474743 102 - 190850796 ATGAATTCGTATT------------------GACCTTATTCT------------------------------------------------------------------------------------------------------------------------------------------------G---AAAAACTGTGCAAGATCTGGGCAG--------------AGAAAGGGCAAGAGG------GAGGAATTCCC-------------AATATTAACAGTATCAATCTGCCACTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6539955 102 - 25294431 ATGAGTTTGTATT------------------GACCTTATTCT------------------------------------------------------------------------------------------------------------------------------------------------G---AAAACCTGTGCAAGATCTGGGTAG--------------AGAAAGGGCAAGAGG------GAGGACTCCCA-------------AATATTAACAGGATCAATCCGCCACTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4100987 102 - 6311556 atgagtttgtatt------------------gaccttattct------------------------------------------------------------------------------------------------------------------------------------------------g---aaaaactgtgcaagatctgggtag--------------agaaagggcaagagg------gaggacttccc-------------aagATTAGCAGGATCAATCTGCCACTA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14957664 102 + 15034901 atgagattgtatt------------------gatcttattct------------------------------------------------------------------------------------------------------------------------------------------------g---aaaaactgtgcaagatctggatag--------------agaaagggcaagagg------gaggacttccc-------------aATATTAACAGCATCAATCTGCCACTA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 980784 297 - 3201129 GTAAGATTGTATTAGATCAAGCCTCTGAGGAAATCTTATTTTGTCTGAGAAACTAAATTGGAGAGGGGGAGAGGGTGCCACTGTATTGGTTTTAGGTGGAATAAAAATATGTACAGAAGAATTCACTAAGGAATAGATTAGTAAAGAAAGGACTTCATAATGAGGGTTTGCACTGATATGATTCTGG---AAAATATATTCATGATTTGGGTAGATCAGGGGCGTGTAAGAAAGGGAAAGGGGCAAGAAGAGGGCTTGCCAGACTGGATCAGTAAGGCTAACAGCATCACTCTGCCACCA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44075847 117 - 53741614 -AGAATTTGTATT------------------GATCCAGTTCT------------------------------------------------------------------------------------------------------------------------------------------------GGAAAAAAAAAATGCAGGATTTGGATAG--------------AGAAAGGGCAAGAGG------GAGGGCTTCCCAGATTGGATCAATAATGTTAACAGCCTCAATCTGCCACAG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1814094 107 + 5974691 ------TTGTATT------------------GATCTGGATCT------------------------------------------------------------------------------------------------------------------------------------------------G---AAAAAA-ATTCAAGATTTAAGTAG--------------AGAAATGGCAAGAGG------GAAG-CATCCTAGATTGGATCAATAGTGCTAAAGGCATCAGTCTGTCACAG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26344610 1567 - 93316391 I e nomLeu3.chr7b 90491342 0 - 115148730 C a score=1376487.000000 s hg38.chr9_KI270719v1_random 82183 146 + 176845 ATAATTATTTAAGAAAAGTATTT-TT-CTGCTTTCAGTTTTATTTATTAAAT-AG-TTTCTGCTAGCCTAATGTTAAAGTCTG----CCAACTAG-T-TCCTTCAAGTTAATCACATTCACTTTTGGTTCCCTCTTAACACATTAAGATATTT------TAT s panTro5.chr4 135105767 146 + 194502333 ATAATTATTTAAGAAAAGTATTT-TT-CTGCTTTCAGTTTTATTTATTAAAT-AG-TTTCTACTAGCCTAATGTTAAAGTCTG----CCAACTAG-T-TCCTTCAAGTTAATCACATTCACTTTTGATTCCCTCTTAACACATTAAGATGTTT------TAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 56593 146 + 95358 ATAATTATTTAAGAAAAGTATTT-TT-GTGCTTTCAGTTTTATTTATTAAAT-AG-TTTCTACTAGCCTAATGTTAAAGTCTG----CCAACTAG-T-TCCTTCAAGTTAATCACATTCACTTTTGATTCCCTCTTAACACATTAAGATATTT------TAT i gorGor5.CYUI01000801v1 C 0 C 0 s rheMac8.chr5 131450207 142 + 190429646 ATAATTATTTAAGATAAGTATTT-TT-CTGCTTTGAGTTTTATTTGT----T-AG-TTTCTACTAGCCTAATGTTAAAGTCTG----CCAACCAG-T-TCCTTCAAGTTAACCACATTCACTTTTGATTCCCTCTTAACACATTAAGATATTT------TAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130969216 142 + 189454096 ATAATTATTTAAGATAAGTATTT-TT-CTGCTTTGAGTTTTATTTGT----T-AG-TTTCTACTAGCCTAATGTTAAAGTCTG----CCAACCAG-T-TCCTTCAAGTTAACCACATTCACTTTTGATTCCCTCTTAACACATTAAGATATTT------TAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34961298 142 - 40319822 ATAATTATTTAAGATAAGTATTT-TT-CTGCTTTGAGTTTTATTTGT----T-AG-TTTCTACTAGCCTAATGTTAAAGTCTG----CCAACCAG-T-TCCTTCAAGTTAACCACATTCACTTTTGATTCCCTCTTAACACATTAAGATATTT------TAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4512992 142 - 9219162 ATAATTATTTAAGATAAGTATTT-TT-CTGCTTTGAGTTTTATTTGT----T-AG-TTTCTACTACCCTAATGTTAAAGTCTG----CCAACCAG-T-TCCTTCAAGTTAACCACATTCACTTTTGATTCCCTCTTAACACATTAAGATATTT------TAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79039671 142 + 135778131 ACAATTATTTAAGAAAAGTATTT-TT-CTGCTTTGAGTTTTATTTGT----T-AG-TTTCTACTAGCCTAATGTTAAAGTCTG----CCAACCAG-T-GCCTTCAAGTTAACCGCATTCACTTTTGATTCCCTCTTAACACATTAAGATATTT------TAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2815694 142 - 3013352 ATAATTATTTAAGATAAGTAGTT-TT-CTGCTTTGAGTTTTATTTGT----T-AG-TTTCTACTACCCTAATGTTAAAGTCTG----CCAACCAG-T-TCCTTCAAGTTAACCACATTCACTTTTGATTCCCTCTTAACACATTAAGATATTT------TAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6038612 142 + 8656713 ATAATTATTTAAGAAAAGTATTT-TT-CTGCTTTGAGTTTTATTTGT----T-AG-TTTCTACTAGCCTAATGTTAAAGTCTG----CCAACCAG-T-TCCTTCAAGTTAACCGCATTCACTTTTGATTCCCTCTTAACACATTAAGATGTTT------TAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474845 145 - 190850796 ATAATTCTTTATGAAAATGATTT-TT-CTGCTTTCAATTTTATTTATTAAGC-AG-TTTCTGCTAGTCT-ATGTTAAAGCTTG----CCAACCAG-T-CCCTTCAAGTTATTCACATTCACTTTTGATTCCCTCTAAGCACATAAAGATATTT------TAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6540057 146 - 25294431 ATAATTCTTTAAGAAATGTGTTT-TT-CTGCTTTCAATTTTATTTATTAAGC-AG-TTTCTGCTCGTCTAATGTTAAAGTCTG----CCAACTAG-T-CCCTTCAAGTTAATCACATTCACTTTTGATTCCTTCTTAACACATTAAGGTATTT------TAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4101089 146 - 6311556 ATAATTCTTTAAAAAATGTATTT-TT-CTGCTTTCAATTTTATTTATTAAGC-AG-TTTCTGCTAGTCTAATGTTAAAGTCTG----CCAACTAG-T-CCCTTCGAGTTAATCAAATTCACTTTTGATTCCTTCTTAATACATTAAGACATTT------TAT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14957766 146 + 15034901 ATAATTATTTAAGAAAAGTATTT-TT-CTGCTTTCAATTTTATTTATTAAGC-AG-TTTCTGCTAGCCTAATGTTAAAGTCTG----CCAACTAG-T-TCCTTCAAGTTAATCACATTCACTTTTGATTCCCTCTTGACACAGTAAGATATTT------TAT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26346177 153 - 93316391 ATAATTCTTGAAGAAAAGTATTT-TT-CAGCTTTCAATTACATGCATTAAGT-AG-TTTCTACTAGTCTAATGTTAAATTCTG----CCAACTAGTT-TTCCTCAAGTTAATTGCATTCACTATTGATTTGCTCTTAACCTATGAAGATATTTTATTAATAT i micMur3.chr14 I 1567 C 0 s otoGar3.GL873702 981081 146 - 3201129 ACAATTCTTAAAGAAAAGTATTT-TTCCAGCTTTTAATTTTATGTATTAAGT-AG-TTTCTAC--ATCTAATGTTAAATTCTG----CAAACTGGCT-TCCATCAAGTTAATCCTATTCACTGTTGATTTTCTCCTAACCCCTTCAGATACTT------TAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44075964 146 - 53741614 -GTATTCTTAAGTAAAAGTATTTATT-CAGCTTTCAATTTCATTTATCAAGTGAT-TTTCCACTCACCTAACTTTAAATTCTGGCGACCAACTGG-TCTCCTTCAAGTTCA------TCACTTTTGAGTCCCCCTTAACCTCTCAGGATAGCT------TCT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1814201 144 + 5974691 -ACATTCCTATAGAAAAGCATTTGCC-CAGTTTTCTATTGCATTTATCAAGT-AGCTTCCTACTCATGC-ATGCTAAATTCTG----ACAAGCAATT-TCCCATGAATTTATCACATTGATTTTT-ATTGCTTCTTAACCTATTATGGTATTT------T-- i dasNov3.JH569232 C 0 C 0 e nomLeu3.chr7b 90491342 0 - 115148730 C a score=8159529.000000 s hg38.chr9_KI270719v1_random 82329 667 + 176845 AACTCTGTGAGTTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACCAGTCGGGCAAATACACTTCCC--TTATTTTTTATGGGTCT-GAAATATCTTTTGTCTTGGGAGATGTATTATTATACAAAAGATCTATTTGGCAATTTATAGTTTGCTTTTTATCTATTCAATTGTTCCCTGGTATTCTTAGAACAGAAAAGCGAACC-TTTTAAGAATAATAACATGCAAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAAAAAACCTCTCATTTTAGGTTCAGTTTGTAACTGAATAGAACATTTTATATCT-AAACCCTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTCTTTTCTATTTAATGTAT----TCTCTAAATTTAACACATTATTTAAAATGCCATCCATATACCTGATCAACTTGAAAAGATGGAGAAACACACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT----ATGTTTCCATTTTCATAATCAAATAAATGTAGACTGTAAAATACTTATTTACAAATCTGTCTGATTTATATAATAAACTCTGAGGAAACTGGAATGAAGTAGTGCTACAAGCAAGGGACAGAATAAAGTTTTGTGTATTAATTACCTGATTTATACTTTAGTCCCTTTAAGTAA s panTro5.chr4 135105913 666 + 194502333 AACTCTGTGAGTTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACCAGTCAGGCAAATACACTTCCC--TTATTTTTTATGGGTCT-GAAATATCTTTTGTCTTGGGAGATGTATTATTATACAAAAGATCTATTTGGCAATTTATAGTTTGCTTTTTATCTATTCAATTGTTCCCTGGTATTCTTAGAACAGAAAAGCGAACC-TTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAAAAA-TCTCTCATTTTAGGTTTAGTTTGTGACTGAATAGAACATTTTATATCT-AAACCCTTAATGGAAAGGCTTTCCTA-TTTTCCACAA-TTTTCTTTTCTATTTAATGTAT----TCTCTAAATTTAACACATTATTTAAAATGCCATCCATATACCTGATCAACTTGAAAAGATGGAGAAACACACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT----ATGTTTCCATTTTCATAATCAAATAAATGTAGACTGTAAAATACTTATTTACAAATCTGTCTGATTTGTATAATAAACTCTGAGGAAACTGGAATGAAGTAGTGCTACAAGCAAGGGACAGAATAAAGTTTTGTGTATTAATTACCTGATTTATACTTTAGTCCCTTTAAGTAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 56739 666 + 95358 AACTCTGTGAGTTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACCAGTCAGGCAAATACACTTCCC--TTATTTTTTATGGGTCT-GAAATATCTTTTGTCTTGGGAGATGCATTATTATACAAAAGATCTACTTGGCAATTTATAGTTTGCTTTTTATCTATTCAATTGTTCCCTGGTATTCTTAGAACAGAAAAGCGAACC-TTTTAAGAATAATAACACGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAAAAA-CCTCTCATTTTAGGTTTAGTTTGTAACTGAATAGAACATTTTATATCT-AAACCCTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTCTTTTCTATTTAATGTAT----TCTCTAAATTTAACACATTATTTAAAATGCCATCCATATACCTGATCAACTTGAAAAGATGGAGAAACACACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT----ATGTTTCCATTTTCATAATCAAATAAATGTAGACTGTAAAATACTTATTTACAAATCTGTCTGATTTATATAATAAACTCTGAGGAAACTGGAATGAAGTAGTGCTACAAGCAAGGGACAGAATAAAGTTTTGTGTATTAATTACCTGATTTATACTTTAGTCCCTTTAAGTAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90491342 646 - 115148730 AACTCTGTGAGTTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACCAGTCAGGCAAATACACTTCCC--TTAAATTTTATGCGTCT-GAAATATCTTTTGTCTTGGG-------------------AGATCTATTTGGCAATTTATAGTTTGCTTTTTATCTGTTCAATTGTTCCCTGGCATTCTTAGGACAGAAAAGCGAACC-TTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAATA--TCTCTCATTTTAGGTTTATTTTGTGCCTGAATAGAACATTTTATATCT-AAACCCTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTCATTTCTATTTAATGGGT----TCTCTATATTTAACACATTATTTAAAATGCCATCCGTATACCTGATCAACTTGAAAAGATGGAGAAACACACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT----ACGTTTCCATTTTCATAATCAAATAAATGTAGACTGGAAAATACTTATTTACAAATCTGCCTGATTTATATAATAAACAGGGAGGAAACTGGAATGAAGTAGTGCTACAAGCAAGGGACAGAATAAAGTTTTGTGTATTAATTACCTGATTCATACTTTGGTCCCTTTAAGTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131450349 661 + 190429646 AA--CTGTGAATTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACTGGTTAGGCAAATACACTTCCC--TTACTTTTTATGGGTCT-GAAATATCTTTTGTCTTCGGAGACGTATTATTATACAAAAGATCTATCTGGCAATTTATAGCTTGCTTTTTATCTATTCAATTGTTCCCCGGTATTCTTAGACCAGAAAAGTGAACCTTTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAAAA--TCTCTCATTTTAGGTTTA-CTTGTGACAGAATAGAACATTTTATATCT-ATATACTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTTTGTTCTATTTAATGTGT----TCTCCAAATTTAACACATTATTTAAAATGCCATCCATATACCTGATCAACTAGGAAACATGGAGAAACACACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT------GTTTCCATTTTCATAATCAAATAAATGTAGACGGTAAAATATGTATTTACAAATCTGCCTGATTTATATAATAAACTCTGAGGAAACTGGAATAAAGTAGTGCTAGAAGCAAGGGACAGAATAAACTTTTGTCTATTAATTGCCTGATTTACACTTTGGTCCCTTTAAGTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130969358 661 + 189454096 AA--CTGTGAATTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACTGGTTAGGCAAATACACTTCCC--TTACTTTTTATGGGTCT-GAAATATCTTTTGTCTTCGGAGACGTATTATTATACAAAAGATCTATCTGGCAATTTATAGCTTGCTTTTTATCTATTCAATTGTTCCCCGGTATTCTTAGACCAGAAAAGTGAACCTTTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAAAA--TCTCTCATTTTAGGTTTA-CTTGTGACAGAATAGAACATTTTATATCT-ATATACTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTTTGTTCTATTTAATGTGT----TCTCCAAATTTAACACATTATTTAAAATGCCATCCATATACCTGATCAACTAGGAAACATGGAGAAACACACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT------GTTTCCATTTTCATAATCAAATAAATGTAGACGGTAAAATATGTATTTACAAATCTGCCTGATTTATATAATAAACTCTGAGGAAACTGGAATAAAGTAGTGCTAGAAGCAAGGGACAGAATAAACTTTTGTCTATTAATTGCCTGATTTACACTTTGGTCCCTTTAAGTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34961440 660 - 40319822 AA--CTGTGAATTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACTGGTTAGGCAAATACACTTCCC--TTATTTTTTATGCGTCT-GAAATATCTTTTGTCTTCGGAGACGTATTATTATACAAAAGATCTATCTGGCAATTTATAGCTTGCTTTTTATCTATTCAATTGTTCCCCGGTATTCTTAGACCAGAAAAGTGAACCTTTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAAAA---CTCTCATTTTAGGTTTA-CTTGTGACAGAATAGAACATTTTATATCT-ATATACTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTTTGTTCTATTTAATGTGT----TCTCCAAATTTAACACATTATTTAAAATGCCATCCATATACCTGATCAACTAGGAAACACGGAGAAACACACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT------GTTTCCATTTTCATAATCAAATAAATGTAGATGGTAAAATATGTATTTACAAATCTGCCTGATTTATATAATAAACTCTGAGGAAACTGGAATAAAGTAGTGCTAGAAGCAAGGGACAGAATAAACTTTTGTCTATTAATTGCCTGATTTACACTTTGGTCCCTTTAAGTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4513134 662 - 9219162 AA--CTGTGAATTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACTGGTTAGGCAAATACACTTCCC--TTATTTTTTATGAGTCT-GAAATATCTTTTGTCTTCGGAGACGTATTATTATACAAAAGATCTATCTGGCAATTTATAGCTTGCTTTTTATCTATTCAATTGTTCCCCGGTATTCTTAGAACAGAAAAGTGAACCTTTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAAAA--TCTCTCATTTTAGGTTTA-CTTGTGACAGAATAGAACATTTTATATCT-AAACACTTAATGGAAAGGCTTTCCTA-TTTCCCACAATTTTTTTGTTCTATTTAATGTGT----TCTCCAAATTTAATACATTATTTAAAATGCCATCCATATACCTGATCAACTAGGAAAGATGGAGAAACACACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT------GTTTCCATTTTCATAATCAAATAAATATAGATGGTAAAATATGTATTTACAAATCTGCCTGATTTATATAATAAACTCTGAGGAAACTGGAATAAAGTAGTGCTAGAAGCAAGGGACAGAATAAACTTTTGTCTATTAATTGCCTGATTTACACTTTGGTCCCTTTAAGTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79039813 662 + 135778131 AA--CTGTGAATTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACTGGTTAGGCAAATACACTTCCC--TTATTTTTTATGGGTCT-GAAATATCTTTTGTCTTCGGAGACGTATTATTATACAAAAGATCTATCTGGCAATTTATAGCTTGCTTTTTATCTATTCAATTGTTCCCCGGTATTCTTAGAACAGAAAAGTGAACCTTTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAACA-----AAAAAAA--TCTCTCATTTTAGGTTTA-CTTGTGGCAGAATAGAACATTTTATATCT-AAACACTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTTTGTTCTATTTAATGTGT----TCTCTAAATTTAACACATTATTTAAAAAGCCATCCATATACCTGATCAACTAGAAAAGATGGAGAAACATACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT------GTTTCCATTTTCATAATCAAATAAATGTAGACTGTAAAATACGTATTTACAAATCTGCCTGATTTATATAATAAACTCTGAGGAAACTGGAATAAAGTAGTGCTAGAAGCAAGGGACAGAATAAACTTTTGTCTATTAATTGCCTGATTTACACTTTGGTCCCTTTAAGTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2815836 662 - 3013352 AA--CTGTGAATTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACTGGTTAGGCAAATACACTTCCC--TTATTTTTTATGAGTCT-GAAATATCTTTTGTCTTCGGAGACGTATTATTATACAAAAGATCTATCTGGCAATTTATAGCTTGCTTTTTATCTATTCAATTGTTCCCCGGTATTCTTAGAACAGAAAAGTGAACCTTTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAAAA--TCTCTCATTTTAGGTTTA-CTTGTGACAGAATAGAACATTTTATATCT-AAACACTTAATGGAAAGGCTTTCCTA-TTTCCCACAATTTTTTTGTTCTATTTAATGTGT----TCTCCAAATTTAATACATTATTTAAAATGCCATCCATATACCTGATCAACTAGGAAAGATGGAGAAACACACAAGTAAAGCTTATTATCTGTTCACA-TTTTATTCT------GTTTCCATTTTCATAATCAAATAAATATAGATGGTAAAATATGTATTTACAAATCTGCCTGATTTATATAATAAACTCTGAGGAAACTGGAATAAAGTAGTGCTAGAAGCAAGGGACAGAATAAACTTTTGTCTATTAATTGCCTGATTTACACTTTGGTCCCTTTAAGTAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6038754 663 + 8656713 AACTCTGTGAATTT-AAAATCTGATGCAAATTCATTGTGGTCAGGCAAGATGCAAGACCGGTTAGGCAAATACACTTCCC--TTATTTTTTATGTGTCT-GAAATATCTTTTGTCTTCGGAGATGTATTGTTATACAAAAGATCTATCTGGCAATTTATAGCTTGCTTTTTATCTATTCAATTGTTCCCCGGTATTCTTAGAACAGAAAAGTGAACCTTTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC------AAAAAAA--TCTCTCATTTTAGGTTTA-CTTGTGACAGAATAGAACATTTTATATCT-AAACACTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTTTGTTCTATTTTATGTGT----TCTCTAAATTTAACACATTATTTAAAATGCCATCCATATACCTGATCAACTAGAAAAGATGGAGAAACACACAAGTAAAGCTTATTTTCTGTTCACA-TTTTATTCT------GTTTCCATTTTTATAATCAAATAAATGTAGACTGTAAAATATGTATTTACAAATCTGCCTGATTTATATAATAAACTCTGAGGAAACTGGAATAAAGTAGTGCTAGAAGCAAGGGACAGAATAAAGTTGTGTGTATTAATTGCCTGATTTATACTTTGGTCCCTTTAAGTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129474990 662 - 190850796 AACTTTGTGAGTTTAAAAATCTGATGCAAATTCATTGTGGTTTGGCAAGATGCAAGACCAGTCAGGCAAGTACGCTTCCC--TTATTTTTCATGGGTCT-GAAATATCCTTTGTCTTGGGAGATGTGTTATTATACAAAAGATCTATTTGGCAATTTATAGTTTGCTTTTTATCTATTCAATTGTTCCCTGGTATTCTTAGTACAGAAAAGCGAACA-TTTTAAGGATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAT-------AAAAAA--TCTCTCGTTTTAGGTTTAGTTTGTGACTGAATAGAACATTTTATATCT-AAACCCTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTCTTTTCTATGTAATGTAT----TCTCTAAGTTTAACACATTATTTAAAATGCCATCTGTATACCTGATCAACTTGAAAAGATAGAGAAATACACAAAA-AAGTTTCTTATCTGTTCGCA-TTTTATTCT----ATGTTTCCATTTTGATAATCAAATAAATGTAGACTGCAAAATACGTATTTCCAAATCTCCCTGATTTACATAATAAACTCTGAGGAAACTGGAATAAAATAGTGCTACAAGCAAGGGACGGAAT--ACTTACGTGTATTAACTGCCCGATTTATACTCTGATCCCTTTAAGTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6540203 661 - 25294431 AACTTTGTGGGTTTAAAAATCTGATACAAGTTCATTGTGGTCT-GCAAGATGCAAGACCAGTCAGACAAGTAAGCTTCCC--TTATTTTCCATGAGTTT-GAAATATCCTTTGTCTTGGGAGATGTGTTATTATACAAAAGATCTATTTGGCAATTTATAGCTTGCTTTTTATCCATTCAATTGTTCCCTGGTATTCTTAGCACAGAAAAGCGAACC-TTTTAAGAATAATAACATGCCAATTACCTTTAATTA--CTCTAGCTCTTTCAGTTAAACA-----AAAAAAA--TCTCTCATTTTAGGTTTAGTGTGTGATTGAATACAACATTTTATATCT-AAACCCTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTCTTGTCTGTGTAACGTAT----TCTCTAAGTTTAACACATTTTTTAAAATGCCATCCGTATACCTGATCAACTTGAAAAGATGGAGAAATGCACAAGT-AAGTTTATTATCTGTTCACA-TTTTATTCT----ATGTTTCCATTTTGATAATCAAATAAATGTAGACTGCAAAATACGTATTTCCAAATCTCTCTGATTTATATAATAAACTCTGAGGAAACTGGAATAAAATAGTGCTACAAGCAAGGGACGGAAT--AGTTATGTGAATTAACTGCCCAATTTATACTCTGATCCCTTTAAGTAA i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4101235 658 - 6311556 AACTTTGTGAGTTTAAAAATCTGATGCAAATTCATTGGGGTCTGGCAAGATGCAAGACCAGTCAGGCAAGTACGTTTCCC--TTATTTTTCATGGGTCT-GAAATATCCTTTGTCTTGGGAGATGTGTTATTATACAAAAGATCTATTTGGCAATTTATAGTTTGCTTTTTATCTATTCAATTGTTCTCTGGTATTCTTAGTACAGAAAAGAGAACC-TTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC-------AAAAAA--TCTCTCATTTTAGGTTTAGTTTGTGACTGAATAGAACATTTTATATCT-AAACCCTTAATGGAAAGGCTTTCCTG-TTTCCCACAA-TTTTCTTTTCTATGTAATGTAT----TCTCTAAGTTTAACACATTATTTAAAATGCCATCCGTATACCTCATCAACTTGAAAAGATGGAGAAATACAC-----AAGTTTATTATCTGTTCACA-TTTTATTCT----ACGTTTCCATTTTGATAATAAAATAAATGTAGACTGCAAAATACGTATTTCCAAATGTCCCTGATTTATATAATAAACTCTGAGGAAACCGGAATAAAATAGTGCTACAAGCAAGGGATGGAAT--AGTTATGTTTATTAACTGCCCCATTTATACTCTGATCCCTTTAAGTAA i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14957912 662 + 15034901 AACTTTGTGAGTTTAAAAATCTGATGCAAATTCATTGTGGTCTGGCAAGATGCAAGACCAGTCAGGCAAGTAGGCTTCCC--TTATTTTTCATGGGTCT-GAAATATCCTTTGTCTTGGGAGATGTGTTATTATACAAAAGATCTATTTGGCAATTTATAGTTTGCTTTTTATCTATTCAATTGTTCCCTGGTATTCTTAGTGCAGAAAAGCGAACC-TTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC-------AAAAAA--TCTCTCATTTTGGGTTTAGTTTGTGACTGAATAGAACATTTTATATCT-AAACCCTTAATGGAAAGGCTTTCCTA-TTTCCCACAA-TTTTCTTTTCTATGTAATGTAT----TCTCTAAGTTTAACACATTATTTAAAACGCCATCCGTATACCTGATCAACTTGAAAAGATGGAGAAATACACAAGT-AAGTTTATTATCTGTTCACA-TTTTATTCT----ATGTTTCCATTTTGATAATCAAATAAATGTAGACTGCAAAATACGTATTTCCAAATCTCCCTGATTTATATAATAAACTCTGAGGAAACTGAAATAAAATAGTGCTACAAGCAAGGGACGGAAT--AGTTATGTGTATTCACTGCCCGATTTATACTCTGATCCCTTTAAGTAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26346330 662 - 93316391 AACACTGTGAGTTTAAAATTCTGACACAACTTCACTGTGGTCAGGCAGGATACAAGGCCAGTCAGGCAAATACATCTCCC--TTATTTTTTGTGGGTCT-AAAATATCTTTTGTCTTGAGAGATGTATTATTATACAAAAGATCTATTTGGCACTGTATGGTTTGCTTTTTATCTATTCAATTGTTCCCTGGTATTCTTAGAACAGAAAAGTGAACC-TTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC-------AAAATA--TCTCTCATTTTAG--------TGTGATTGAATAGAATATTTTATATCTGAAACCCTTAATGGAAAGGCTTTCCCA-TTTCCTATGA-TTTTCTTTTCTATTTAATGTAT----TATTTAAATTTAACACATTATTTAAAGTGCCATCCATATACTTGATCAAGTTGAAAGGATGGAGAAACACACAAGTAAAGCTTATTATCTATTCATA-TTTTATTCTGATAATGTTTCCATTTTCACAATCAAATAAATGTGGACTATAAAATAGATATTTCCAAATCCGCCTGTTTTATATAATAAACTTTATAGAAATTGGAATGAAGCTGTGCTGTAAGCAAGGGATAGAATAAAATTATGTATATTAATTGCTTGATTTATACTCTTATTCCTTTAAGTAA i micMur3.chr14 C 0 I 305 s otoGar3.GL873702 981227 660 - 3201129 AACACTGTGAGTTTAAGAGCCTGACACAACTACACTGTGGTCAGGAAGGTTACGGGGCCAGTCAGGCAAATACACCGCCC--TTATTTTTTATGGTTCTGAAAATATCTTTTGTCTTGAGAGATGTATTATTATACAAAAGATCTATTTGGCAATGTATGGTTTGCTTTTTATCTATTCAATTGTTCCCTGGTATTCTTAGAATAGAAAAGTGAACC-TTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTAAAC-------AAAAAA--TCGCTCATTTTAG--------TGTGACTGAATAGAACGTTTTATATCTGAAACCCTTAATGGAAAGGCTTTCCCA-TTTCCCATGA-TTTTCTTTTCtatttaatatat----tatttaaatttaaCACATTATTTAAAGTGCCATCCATATACCCGATCAACTTGAAAGGATGGAGAAACACACAAGTAAAGCTT-TTATCTATTCATA-TTTTATTCTCATAATGTTTCCATTTTCACAATCAAATAAATGTAGGCTGTAAAATATATATTTCCAAGTCTGCATGTTTTATGTAATAAACTTTATAGAAATTGGAATAAAGTAGTGTTGTAAGCAGGGGATAGAATAAATTTATGTATATTAATTATCAGATTTATACTCTTATTCTTTTAAGT-- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44076110 667 - 53741614 AATGCCGTGAGTTTAAAAATCTGAGGCAACTTCACTGTGGTCAGGGAGGATAAGGGGCCAGTCAGGCAAATACACCTCCCCTTTTTTTTTTATGGCTTT-GAAGTATCTTTTGTCTAGAGAGATGTATTATTATACAAAAGATCTATTTGGCAATTTATAGTTCGCTTTTTATCTATTCAATTGTTCCTTGGTATTCTTAGAACAGAAAAGGGAACC-TTTTAAGAATAATAACATGCCAATTACCTTTAATTACTCTCTAGCTCTTTCAGTTTTAA-------AAAAAA--TCTCTCATTTTAGGCTTAGTTTGTGTCTGAATAGAACATTTCATATCTGAAACTCTTAATGGAAAGGCTTTCCTA-TTTTCCACGA-CTTTCCTTCCTATTTAATGTATTCTCTCTCTAAATTTAACACATTATTTAAAGTGCCATCCTTCTAACTGATCCACTTGAAAAGATGGAGAAGCTCACGAATAAAGCTTATTATCTATTTATA-TTTTATACG---GATGTTTCTATTTTTACAATCAAATAAATGTTGACTGTAAAATATATATTTTCAAATCTAT----TTTACATAATACATTTTATGGAAACTGGAATAAAACAGGAATGTAATCAAGGTAGGGAGTAAACCTGTGTATAATATTTGCCTGATTTATACTTTG--TCCTTTAAATAA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1814345 649 + 5974691 -------------TAAAGATCTGACTCATCTTCACTGTGGTCAGGCAGGATTCAAGTCCAGATAGACAAATATACCTCCC--CTCTTTTTTGTG-GTTT-GAAATAACTTTTGTCTGCAAGGATGTATTATTACACAAAAGATCTATTTGGCAATGTATAGTTCACTTTTTGTATATTTAATTGCTCCATGGTATTTTTAGAACAGAAGAGAGAAAC-TTTTAAGAATAATAATATGTCAATTAATTTTAATTACTCTCCAGGTCTTTCAGTTTTTTGGTTTTAAATTTA--ACTCTCATTTTAGGTTTACCTTGTGTCTGAATAGAATATTTTATATTTGAAACACTTAATGGAAAAGCTTTCCTATTTTTCCACAA-TGTTCTTTACtatttaattttt----tctctaaatttaaaatatta--taaaGTGCAAT-TATCTACCTCAGCAACTTGAAAAGATGGAGAAACATA------AAGTTTATT-TTTATTCATATTTTTATGAT---AATGTTTCCATTTCAATAATCAAAT-AATGTTGattataaaatataaaaattcaa-tttttcagttttacatattaaattttatGGAAACTGAAATAAAGTAGAAATGTAAGCAAAACATATAGTAAAGTTATGTATATTATTTTACTTAATTATA-TGCAAACTCTATGAATAA i dasNov3.JH569232 C 0 C 0 a score=372418.000000 s hg38.chr9_KI270719v1_random 82996 39 + 176845 AAGAATGTAACAAAT-----AGA-A-GGATAGTTATTAATATATTT s panTro5.chr4 135106579 39 + 194502333 AAGAAGGTAACAAAT-----AGA-A-GGATAGTTATTAATATATTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 57405 39 + 95358 AAGAATGTAACAAAT-----AGA-A-GGATAGTTATTAATATATTT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90491988 39 - 115148730 AATAATGTAACAAAT-----AGA-A-GGACAATTATTAATATATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451010 39 + 190429646 AAGAGTGTAACAAAT-----AGA-A-GGTTAGTTATTAATATATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970019 39 + 189454096 AAGAGTGTAACAAAT-----AGA-A-GGTTAGTTATTAATATATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962100 39 - 40319822 AAGAGTGTAACAAAT-----AGA-A-AGTTAGTTATTAATATATTT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4513796 39 - 9219162 AGGAGTGTAACAAAT-----AGA-A-GGTTAGTTATTAATATATTT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79040475 39 + 135778131 AAGAGTGTAACAAAT-----AGA-A-GGTTAGTTATTAATATATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2816498 39 - 3013352 AGGAGTGTAACAAAT-----AGA-A-GGTTAGTTATTAATATATTT i manLeu1.NW_012103277v1 C 0 M 735 s colAng1.NW_012114544v1 6039417 39 + 8656713 AAGAGTGTAACAAAG-----AGA-A-GGATAGTTATTAATATATTT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129475652 40 - 190850796 AAGAGTGTAACAAAT-----AGA-ATGAATAGTTATTAATATATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6540864 40 - 25294431 AAGAGTGTAACAAAT-----AGA-ATGAATAGTTATTAATATATTT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4101893 40 - 6311556 AAGAGTGTAGCAAAT-----AGA-ATGAATAGTTATTAATATATTT i cebCap1.NW_016107420v1 C 0 C 0 s aotNan1.NW_018507635v1 14958574 40 + 15034901 AAGAGTGTAACAAAT-----AGA-ATGAATAGTTATTAATATATTT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 981887 37 - 3201129 AAGAGTGTAACAAAT-----GGATA-AGACAGTTATCAG---ATTC i otoGar3.GL873702 C 0 I 9 s canFam3.chr19 44076777 41 - 53741614 AATAGTGTAACAAATTAAAAAAA-A-AAAAAGCTATCAA---ATTT i canFam3.chr19 C 0 I 3 s dasNov3.JH569232 1814994 36 + 5974691 AACAGTGCAACAAGT-----GGG-A-AAAATGGTATCAA---ATTT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26346992 305 - 93316391 I a score=679448.000000 s hg38.chr9_KI270719v1_random 83035 81 + 176845 --GGAGGAG------------AAAGAAGGATAAAATGAAAGATACAA-TGTTCTTAAAAACGGAGAGTTTTATC--TTTT-TTCAGAAGTTTAAAAAAT s panTro5.chr4 135106618 81 + 194502333 --GGAGGAG------------AAAGAAGGATAAAATGAAAGATACAA-TGCTCTTAAAAACTGAGAGTTTTATC--TTTT-TTCAGAAGTTTAAAAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 57444 80 + 95358 --AGAGGAG------------AAAGAAGGATAAAATGAAAGATACAA-TGTTCTTAAAAACCGAGAGTTTTATC--TTTT-TTCAGAAGTTT-AAAAAT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492027 81 - 115148730 --GGAGGAG------------AAAGAAGGGCAAAATGAAAGATACAA-TGTTCTTAAAAACCCAGAGTTTTATC--TTTT-TTCAGAAGTTTAAAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451049 82 + 190429646 --GGATGAG------------AAAGAAGGATAAAATGAAACATACAA-TGTTCTTAAAAACTGAGAGTTTTATCT-TTTT-TTCAGAAGTTTAAAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970058 82 + 189454096 --GGATGAG------------AAAGAAGGATAAAATGAAACATACAA-TGTTCTTAAAAACTGAGAGTTTTACCT-TTTT-TTCAGAAGTTTAAAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962139 82 - 40319822 --GGATGAG------------AAAGAAGGATAAAATGAAACATACAA-TGTTCTTAAAAACTGAGAGTTTTATCT-TTTT-TTCAGAAGTTTAAAAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4513835 82 - 9219162 --GGACGAG------------AAAGAAGGATAAAATGAAACATACAA-TGTTCTTAAAAACTGAGAGTTTTATCT-TTTT-TTCAGAAGTTTAAAAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79040514 82 + 135778131 --GGACGAG------------AAAGAAGGATAAAATGAAACATACAA-TGTTCTTAAAAACTGAGAGTTTTATCT-TTTT-TTCAGAAGTTTATAAAAT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6039456 82 + 8656713 --GGATGAG------------AAAGAAAGATAAAATGAAAGATACAA-TGTTCTTAAAAACCAAGAGTTTTATCT-TTTT-TTCAGAAGTTTAAAAAAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129475692 81 - 190850796 --GGATGAG------------AAAGAAGGATAAAATGAAAGGTACAA-CGTTCTTAAAACCTGAGAGTTTAATCT-TTTT-TTCAGAAGTTT-AAAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6540904 83 - 25294431 --GGATAAG------------AAAGGAAGATAAAATGAAAGATACAA-TGTTCTTAAAAACTGAGAGTTTTATCT-TTTTCTTCAGAAGTTTAAAAAAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4101933 80 - 6311556 --GGATGAG------------AAATAAGGATAAAATGAAAGATACAA-TGTTCTTAAAAAC--AGAGTTTTATCT-TTTT-TTCAGAAGTTTAAAAAAT i cebCap1.NW_016107420v1 C 0 I 41 s aotNan1.NW_018507635v1 14958614 82 + 15034901 --GGATGAG------------AAAGAAGGATAAAATGAAAGATACAA-TGTTCTTAAAAACTGAGAGTTTTATCT-TTTT-TTCAGAAGTTTAAAAAAT i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 981933 72 - 3201129 --GAATGAA------------AGATAAAGATAAAATGGAAAAAACAA-AGT-----------AGGAGTTTTTACTAATTT-TTCAGAAGTTTTGGAAAT i otoGar3.GL873702 I 9 C 0 s canFam3.chr19 44076821 84 - 53741614 --GGACTAGTaaagaaagaccaaaaaaagataaaacagaaaaaaaaa---------aaaaCTAGGAATTTT--CC-TTTT-TTCAGACATTTTTGAAAT i canFam3.chr19 I 3 C 0 s dasNov3.JH569232 1815030 82 + 5974691 GGAGAAATG------------GAAAAAAAATAAAATGGAAAATACAAGTGGT----AAAATGGGGAATTTTACCTGTTTT-ATAAGAAGTTCTGGAAAT i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26346992 305 - 93316391 I e manLeu1.NW_012103277v1 2816537 735 - 3013352 M a score=1621262.000000 s hg38.chr9_KI270719v1_random 83116 230 + 176845 ATTTAAACATTTCCCTTTATGTTAGCG---CAT---ATTTATGTTATACATTTCATTTACAAGTAATTGTATGGTAAATAGTTACAAAAACAACAAGGAAAAGCTTTGAGTTAAGGAGCTCATGA-TTTTCAGTGTAAAATACATGTTATTTGAGTAATTTGGGAAACTGACAGAAGCTTTCTTGCAGTCAAGAATGCTGCTCaaaaattaatttta-------aaataaaaata--------aaag-aaaaa----- s panTro5.chr4 135106699 230 + 194502333 ATTTAAACATTTTCCTTTATGTTAGCT---CAT---ATTTATGTTATACATTTCATTTACAAGTAATTGTATGGTAAATAGTTATGAAAACAACAAGGAAAAGCTTTGAGTTAAGGAGCTCATGA-TTTTCAGTGTAAAATACATGTTATTTGAGTAATTTGGGAAACTGACAGAAGCTTTCTTGCAGTCAAGAATGCTGCTCaaaaattaatttta-------aaataaaaata--------aaag-aaaaa----- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 57524 230 + 95358 ATTTAAACATTTCCCTTTATGTTAGCG---CAT---ATTTATGTTATACATTTCATTTACAAGTAATTGTATGGTAAATAGTTACAAAAACAACAAGGAAAAGCTTTGAGTTAAGGAGCTCATGA-TTTTCAGTGTAAAATACATGTTATTTGAGTAATTTGGGAAACTGACAGAAGCTTTCTTGCAGTCAAGAATGCTGCTCaaaaattaatttta-------aaataaaaata--------aaag-aaaaa----- i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492108 230 - 115148730 ATTTAAACATTTTGCTTTATGTTAGTG---CAT---ATTTATATTATACATTTCATTTACAAGTAACTGTATGGTAAATAGTTACAAAAACAACAAAGAAAAGCTTTGAGTTAAGGAGCTCATGA-TTTTCCGTGTAAAATACATGTTATTTGAGTAATTTGGGAAACTGACAGAAGCTTTCTTGCAGTCAAGAATGCTGCTCaaaaattaatttta-------aaataaaaata--------aaag-aaaaa----- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451131 230 + 190429646 ATTTAAACATTTAGCTTTATGGTAGTG---CAT---ATTTATATTATACCTTTCATTTGCAAGTAATCGTATGGTAAATAGTTCCAAAAACAGCAAGGAAAAGCTTTGAGTTAAGGAGCTCATGA-TTTTCAGTGTAAAATACATGTTATTTGAGTAATTTAGGAAACTGACAGAAGTTGTCTTGCAGTCAAGAATGCTGCTCaaaaattaatttta-------aaataaaaata--------aatg-aaaaa----- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970140 230 + 189454096 ATTTAAACATTTAGCTTTATGGTAGTG---CAT---ATTTATATTATACCTTTCATTTGCAAGTAATCGTATGGTAAATAGTTCCAAAAACAGCAAGGAAAAGCTTTGAGTTAAGGAGCTCATGA-TTTTCAGTGTAAAATACATGTTATTTGAGTAATTTAGGAAACTGACAGAAGCTGTCTTGCAGTCAAGAATGCTGCTCaaaaattaatttta-------aaataaaaata--------aatg-aaaaa----- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962221 230 - 40319822 ATTTAAACATTTAGCTTTATGGTAGTG---CAT---ATTTATATTATACCTTTCATTTGCAAGTAATCGTATGGTAAATAGTTCCAAAAACAGCAAGGAAAAGCTTTGAGTTAAGGAGCTCATGA-TTTTCAGTGTAAAATACATGTTATTTGAGTAATTTAGGAAACTGACAGAAGCTGTCTTGCAGTCAAGAATGCTGCTCaaaaattaatttta-------aaataaaaata--------aatg-aaaaa----- i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4513917 230 - 9219162 ATTTAAACATTTAGCTTTATGGTAGTG---CAT---ATTTATATTATACCTTTCATTTACAAGTAATTGTATGGTAAATAGTTACAAAAACAGCAAGGAAAAGCTTTGAGTTAAGGAGCTCATGA-TTTTCAGTGTAAAATACATGTTATTTGAGTAATTTAGGAAACTGACAGAAGCTGTCTTGCAGTCAAGAATGCTGCTCaaaaattaatttta-------aaataaaaata--------aaag-aaaaa----- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79040596 230 + 135778131 ATTTAAACATTTAGCTTTATGGTAGTG---CAT---ATTTATATTATACCTTTCATTTACAAGTAATCGTATGGTAAATAGTTACAAAAACAGCAAGGAAAAGCTTTGAGTTAAGGAGCTCATGA-TTTTCAGTGTAAAATACATGCTATTTGAGTAATCTAGAAAACTGACAGAAGCTGTCTTGCAGTCAAGAATGCTGCTCaaaaattaatttta-------aaataaaaata--------aaag-aaaaa----- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6039538 230 + 8656713 GTTTAAACATTTAACTTTATGGTAGTG---CAT---ATTTATATTATACCTTTCATTTAC-ATTAATTGTATGGTAAATAGTTACAAAAACAGCAAGGAAAAGCTTTGAGTTAAGGAGGTCACGA-TTTTCCGTGTAAAATACATGTTATTTTAGTAATTTAGGAAGCTGACAGAAGCTTTCTTGCAGTCAAGAATGCTGCTCAaaaattaatttta-------aaatgaaaata--------aaagaaaaaa----- i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129475773 223 - 190850796 ATTTAAACA--TAGCTTTATG-TAGCG---CAT---ATTTATATTAGACACTTTATTTACAAGTAATTACATGGTGAATAAACACAAA---AACAAGGAAAAG-TTTGAATTAAGAAGTCCATGA-TTTTCAATGTAAAATACATGTTATTTGAACAATTTAGCAAACTGATAGAAGCTTTCTTACACTCAAGAATTCTGCTCaaaaattattttta-------atataaaaata--------aaaG-AAAAA----- i calJac3.chr3 C 0 I 364 s saiBol1.JH378129 6540987 226 - 25294431 ATTTAAACA--TAGCCTTATG-TAGCA---CAT---ATTTATATTACACACTTCATTTACAAGTAATTACATGGTGATTAAATACAAAAACAACAAGGAAAAG-TTTGAATTAAGAAGTCCATGA-TTTTCAGTATAAAATACATGTTAGTTGAATAATTTAGGAAACTGATAGAAGCTTTCTTACAGTCAAGAATGCTGCTCACaaattattttta-------atataaaaata--------aaag-aaaaa----- i saiBol1.JH378129 C 0 I 1 s aotNan1.NW_018507635v1 14958696 226 + 15034901 ATTTAAACA--TAGCTTTATG-TAGTG---CAT---ATCTATATTACACACTTCATTTACAAGTAATTACATGGTGAATAAATAAAAAAACAACAAGGGAAAG-TTTGAATTAAGAAGTCCATGA-TTTTCAGTGTAAAATACATGTTATTTGAACAATTTAGGAAACTGATAGAAGCTTTCTTACAGTCAAGAATGCTACTCACAAATTGTTTTTG-------ATATAAAAATA--------AAAG-AAAAA----- i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 982005 217 - 3201129 -------------GCTTAACTCTAGTGTGTTAC---TTTTATATTATGCATCTCCTTTACACCTAAGTGAACAGTAAGTATTTATAAAGGCAATAAGGTAAAGTTTGGGTTTAGAAGGCCTGTGG-CATTCAATGTAAAATACATGTTATTTGATTAA-CTGAGAAACTGACAGAAGTTTAATTGCAGTCAAGCACTGTACTCACAAATTATTTTTT-------TTTTGAAGGAA--------AAAA-TAA------- i otoGar3.GL873702 C 0 I 1 s canFam3.chr19 44076905 219 - 53741614 -GTTAAACC---------ATAGCCCCT---TAC---TTTTATATTATACATTTTATTTATACCCAAACATAGATTAAATATTTATAAAAGCAATAACATAAACTTTGGGCTTAAGATGTACATGACTTTTAAATGTAAAATATCTATTATTTGATCAATTCAGGAAATGGACAGCCACTTCCTTGCAGTCAAGTATTCTCCTCATACattatttttt-------taattaaa--a--------aatG-AACAA----- i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1815112 222 + 5974691 GTTTAAACT-------------TACCC---CATATCATTTACACTATACATTTAATTTATACTTAAATATATAGTAGGTTTTTATAAA-ACAGGATGGGAAA----------------CTCAT-A-TCTTAATAGTACCACATATTTTATTTGATTGGTTCAGGAAACTGACAGAAGGTTTCTTGAACTCAAGCATTCTTCCCAAAAATTATGCATATATAAACAAACAAAAAAACATATTTTAAAG-AAAAAAATAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26346992 305 - 93316391 I e cebCap1.NW_016107420v1 4102013 41 - 6311556 I e manLeu1.NW_012103277v1 2816537 735 - 3013352 M a score=89963.000000 s hg38.chr9_KI270719v1_random 83346 13 + 176845 -aaaTCCTGAAAGC s panTro5.chr4 135106929 12 + 194502333 -aa-tCCTAAAAGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 57754 13 + 95358 -aaaTCCTGAAAGC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492338 12 - 115148730 -aa-tCCTGAAAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451361 12 + 190429646 -aa-taCTGAAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970370 12 + 189454096 -aa-tGCTGAAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962451 12 - 40319822 -aa-taCTGAAAAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514147 12 - 9219162 -aa-taCTGAAAAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79040826 12 + 135778131 -aa-taCTGAAAGC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6039768 12 + 8656713 -aa-tactgaaaGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129476360 12 - 190850796 -aa-TCCTGAAAGC i calJac3.chr3 I 364 C 0 s saiBol1.JH378129 6541214 12 - 25294431 -aa-tCCTGAAAGC i saiBol1.JH378129 I 1 C 0 s aotNan1.NW_018507635v1 14958922 12 + 15034901 -AA-TCCTGAAAGC i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 982223 12 - 3201129 -AA-TCCTGAAAGC i otoGar3.GL873702 I 1 C 0 s canFam3.chr19 44077125 12 - 53741614 -AT-TTCTGATAAC i canFam3.chr19 I 1 I 558 s dasNov3.JH569232 1815334 13 + 5974691 AAA-CTCTGAAAAC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26346992 305 - 93316391 I e cebCap1.NW_016107420v1 4102013 41 - 6311556 I e manLeu1.NW_012103277v1 2816537 735 - 3013352 M a score=1230370.000000 s hg38.chr9_KI270719v1_random 83359 172 + 176845 TTATGTAGCAAAACAAGTATTGTAGTCC-ATTACAAAAATTAGCCTTTTCTGAAATCATG--T------TAAAAAG------CAAAAAGATCTTAGAGCAGAATTTCATGTACAGTTCATTTTGGGATTGATCTTACTTCCTTGATAG-GTGGTCTTACTTCATCCT--GTT--GGAGCCCATCATGGAGAG s panTro5.chr4 135106941 172 + 194502333 TTATGTAGCAAAACAAGTATTGTAGTCC-ATTATAAAAATTAGCCTTTTCTGAAATCATT--T------TAAAAAG------CAAAAAGATCTTAGAGCAGAATTTCATGTACAGTTCATTTTGGGATTGATCTTACTTCCTTGATAG-GTGGTCTTACTTCATCCT--GTT--GGAGCCCATCATGGAGAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 57767 172 + 95358 TTATGTAGCAAAACAAGTATTGTAGTCC-ATTGCAAAAATTAGCCTTTTCTGAAATCATG--T------TAAAAAG------CAAAAAGATCTTAGAGCAGAATTTCATGTACAGTTCATTTTGGGATTGATCTTACTTTCTTGATAG-GTGGTCTTACTTCATCCT--GTT--GGAGCCCATCATGGAGAG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492350 172 - 115148730 TTATGTAGCAAAACAAGTATTGTAGTCC-GTTACAAAAATTAGCCTTTTCTGAAATCATG--T------TAAAAAG------CAAAAAGATCTTTGAGCAGAATTCCATGTACAGTTCATTTTGGGATTGATCCTACTTCCTTGATAG-GTGGTCTTACTTCATCCT--GTT--GGAGTCCATCATGGAGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451373 172 + 190429646 TTATGTAACAAAACAAGTATGATAGTCC-ATTACAAAAATTAGCCTTTTCTGAAATCATG--T------TAAAAGA------CAAAAAGATCTTAGAGCAGAATTTCATGTACAGTTCATTTTGGGATTGATCTTACTTGCTTGATAG-GTGGTCTTACTTCATCCT--GTT--GGAGCCCATCATGGAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970382 172 + 189454096 TTATGTAACAAAACAAGTATTATAGTCC-ATTACAAAAATTAGCCTTTTCTGAAATCATG--T------TAAAAGA------CAAAAAGATCTTAGAGCAGAATTTCATGTACAGTTCATTTTGGGATTGATCTTACTTGCTTGATAG-GTGGTCTTACTTCATCCT--GTT--GGAGCCCATCATGGAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962463 172 - 40319822 TTACGTAACAAAACAAGTATTATAGTCC-ATTACAAAAATTAGCCTTTTCTGAAATCATG--T------TAAAAGA------CAAAAAGATCTTAGAGCAGAATTTCATGTACAGTTCATTTTGGGATTGATCTTACTTGCTTGATAG-GTGGTCTTACTTCATCCT--GTT--GGAGCCCATCATGGAGAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514159 172 - 9219162 TTATGTAACAAAACAAGTATTATAGTCC-ATTACAAAAATTAGCCTTTTCTGAAATCATG--T------TAAAAGA------CAAAAAGATCTTAGAGCAGAATTTCATGTACAGTTCATTTTGGGATTGATCTTACTTGCTTGATAG-GTGGTCTTACTTCATCCT--GTT--GGAGCCCATCATGGAGAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79040838 172 + 135778131 TTATGTAACAAAGCAAGTATTATAGTCC-ATTACAAAAATTAGCCTTTTCTGAAATCACG--T------TAAAAGA------CAAAAAGATCTTAGAGCAGAATTTCATGTACAGTTCATTTTGGGATTGATCTTACTTGCTTGATAG-GTGGTCTTACTTCATCCT--GTT--GGAGCCCATCATGGAGAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6039780 172 + 8656713 TTATGTAACAAAACAAGTATTATAGTCC-ATTACAAAAATTAGCCTTTTCTGAAATCACG--T------TAAAAGA------CAAAAAGATCTTAGAGCAGAATGTCATGTACAGTTCATTTTGGGATTGATCTTAGTTGCTTGACAG-GTGGTCTTACTTCATCCT--GTT--GGAGCTCTTCATGGAGAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129476372 149 - 190850796 TTAT-TAGCAAAACAAGTATTATAGTCC-ATTACAAAAGTCAGCCTTTTCTGAAA------------------------------------CTTAGAGCAGAATTCCATGTACAGTTCATTTTGGGATTGATCTTACTTCACTGATAG-GTGGTTTCACTCCATACT--GTT--GGATCCCCTCATGGAGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6541226 172 - 25294431 TTAT-TAGCAAAACAAGTATTATAGTCC-ATTACAAAAGCCAGCCTTTTCTAAAATCATA--T------CAAAAAAG-----CAAAAAGATCTTAGAGCAGAATTCCATGTATAGTTCATTTTGGGATTGATCTTACTTCACTGATAG-GTGGTCTCACTCCACACT--GTT--GGATCTCATCATGGAGAA i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14958934 172 + 15034901 TTAT-TAGCAAAACAAGTATTATAGTCC-ATTACAAAAGTCAGCCTTTTCTGAAATCATG--T------CAAAAAAG-----CAAAAAGATCTTAGAGCAGAATTCCATGTACAGTTCATTTTGGGATTGATCTTACTTCACTGATAG-ATGGTCTCACTCCACACT--GTT--GGATCACATCATGGAGAA i aotNan1.NW_018507635v1 C 0 C 0 s otoGar3.GL873702 982235 157 - 3201129 -TATGT---------ATTCTTGTAGTCC-TAAACAAGATATAGCATTTTATGATAACGCAGTT------TAAATTA------AGAAAAGGTCTTATGGTAGAAGTCTATGTACAGCTCATCTTAAGATTGATCTTGCTTTATT---------GTTTTATGTCACATTC-TTT--GGATCTCATCAAGAATAA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44077695 180 - 53741614 TTATGTAGCAAGACTAGTCT-------A-ACTCCCAAAATTAGCATTTTCtaatataatt--ttttttctaatataatttttttaaaaGCTCTTGGAGTGGAAATACATGTTCATCTCATCTTGGGATCAATCTTCCTTCATTGGTAGAATGACCTTATGCCACAATTGTTT--GGGTCTGATTAAGGAGAA i canFam3.chr19 I 558 C 0 s dasNov3.JH569232 1815347 170 + 5974691 TTATACATCTAGACAACTACAGCTGTCCAAATTCAAGAATTAGCAGTTTCTAATATCATC--T------TTTAAAA---------AAAGATCTTATAGTGGAATTTCATGTATATCTCATCTTGATATGGAGC-TGTTTCTTTCATAG--TGGTCTTAGTTCATACT--GTTTGGGATCCCATCAAAGAAAA i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26346992 305 - 93316391 I e cebCap1.NW_016107420v1 4102013 41 - 6311556 I e manLeu1.NW_012103277v1 2816537 735 - 3013352 M a score=450506.000000 s hg38.chr9_KI270719v1_random 83531 52 + 176845 CTG-TTTTACAAATATTCTTAGCTCTACTACTCACATAAAAATTCAACCTATG s panTro5.chr4 135107113 52 + 194502333 CTG-TTTTACAAATATTCTTAGCTCTACTACTCACATAAAAATTCAACTTATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 57939 52 + 95358 CTG-TTTTACAAATATTCTTAGCTCTACTACTCACATAAAAATTCAACCTATG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492522 52 - 115148730 CTG-TTTTACAAATATTCTTAGCTCTACTACTCACATAAAAATTCAGCCCGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451545 52 + 190429646 CTG-TTTTACAAACATTCTTAGCTCTACTACTCACATAAAAATCCAATCTATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970554 52 + 189454096 CTG-TTTTACAAACATTCTTAGCTCTACTACTCACATAAAAATCCAATCTATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962635 52 - 40319822 CTG-TTTTACAAACATTCTTAGCTCTACTACTCACATAAAAATCCAATCTATA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514331 52 - 9219162 CTG-TTTTACAAATATTCTTAGCTCTACTACTCACATAAAAATCCAATCTATG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041010 52 + 135778131 CTG-TTTTACAAATATTCTTAGCTCTACTATTCACATAAAAATCCAATCTATG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6039952 52 + 8656713 CTG-TTTTACAAATATTCTTAGCTCTACTACTCACATAAAAATCCAGCCTATG i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129476521 52 - 190850796 TTG-TTTTACAAATATTCCTAGCTCTTCTACTCAGATAGTAATTCAACCTATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6541398 52 - 25294431 TTG-TTTTACAAACATTCCTAGCTTTTCTACTCAGATAGAAATTCAACCCATG i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14959106 52 + 15034901 CTG-TTTTACAAATATTCCTAGCTCTTCTACTCAGATAGAAATTCAACCTATG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26347297 51 - 93316391 CTG-TTCTATAAATATTCCTAGCTCTACTGCTCACATA-AAATGTAGCTTGTA i micMur3.chr14 I 305 C 0 s otoGar3.GL873702 982392 52 - 3201129 CTG-TTCAAAAACTATTCCTAGCTTTACTGTTCATAAAGAAATGTAGAGTGTG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44077875 53 - 53741614 TTGTTTTTACTAGTATTTGTAGCTCTACTGCTCATGTAGAAATTCAGCCTGTG i canFam3.chr19 C 0 I 199 s dasNov3.JH569232 1815517 47 + 5974691 TGG-TTTGACAAATATTCC-AGCACTACTGCTCATTTAGAAATTCATTC---- i dasNov3.JH569232 C 0 C 0 e cebCap1.NW_016107420v1 4102013 41 - 6311556 I e manLeu1.NW_012103277v1 2816537 735 - 3013352 M a score=600065.000000 s hg38.chr9_KI270719v1_random 83583 70 + 176845 ACTCCTGTTTCTGATAAAGTAGCTATTTAAATTCATTAAGAATGTTTCATCATTTTAGTATGCAAAATGC s panTro5.chr4 135107165 70 + 194502333 ACTCCTGTTTCTGATAAAGTAGCTATTTAAATTCATTAAGAATGTTTCATCATTTTAGTATGCAAAATGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 57991 70 + 95358 ACTCCTGTTTCTGATAAAGTAGCTATTTAAATTCATTAAGAATGTTTCATCATTTTAGTATGCAAAATGC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492574 70 - 115148730 ATTCCTGTTTCTGATAAAGTAGCTATTTAAATTCATTAAGAATGTTTCATCATTTTAGTATGCAAGATGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451597 70 + 190429646 ACTACTGTTTCTGATAAAGTAGCTATTTAAATTCATTAAGAATGTTTCATCATTTTAGTATGCAAAATGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970606 70 + 189454096 ACTACTGTTTCTGATAAAGTAGCTATTTAAATTCATTAAGAATGTTTCATCATTTTAGTATGCAAAATAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962687 70 - 40319822 ACTACTGTTTCTGATAAAGTAGCTATTTAAATTCATTAAGAATGTTTCATCATTTTAGTATGCAAAATGC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514383 70 - 9219162 ACTCCTGTTTCTGATAAAGTAGTTATTTAAATTCATTAAGAATGTTTCATCATTTTAGTATGCAAAATGC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041062 70 + 135778131 ACTCCTGTTTCTGATAAAGTAGCTATTTAAATTCGTTAAGAATGTTTCATCATTTTAGTATGTAAAATGC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012114544v1 6040004 70 + 8656713 ACTCCTGTTTCTGATAAAGTAGCTATTTAAATTCATTAGGAATGTTTCATCATTTTAGTATGCAAAATGC i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129476573 70 - 190850796 ACTCCTGTTTCTCATAATGTAACTACTTAAATTCATTAAGAATGTTTCATCGTTTCAGTATGCAAAATGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6541450 70 - 25294431 ACTCCTGTTTCTGAATATGTAACTATTTAAGTTCATTAAGAATGTTTCATCATTTTAGTATGCAAAATGC i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14959158 70 + 15034901 ACTCCTGTTTCTGATAATGTAACTATTTAAATTCATTAAGAATGTTTCATCATTTTAGTATGCAAAATGC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26347348 70 - 93316391 ACTCCTGTTTCTGATCATGTGACTATTTAAAGTCATTAAGAATATGGTATTATTTTACTATGAAAGATGT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 982444 63 - 3201129 ACTCCTGTTTCAGTTCAT---ACTATTCAAAGTCATT----ATACGGTGTTATTTTACTATGAAAAGTGT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44078127 70 - 53741614 ccTCTTGTTTCTGATTACATGACTATCCAAAGCTACTAAGAATGTTTTGTTATTTTAGTATGCAAAATGT i canFam3.chr19 I 199 C 0 s dasNov3.JH569232 1815564 36 + 5974691 --------------------AGCAATTTGAATGTAAAAATAA--------------GATATTCAAAATAT i dasNov3.JH569232 C 0 C 0 e cebCap1.NW_016107420v1 4102013 41 - 6311556 I e manLeu1.NW_012103277v1 2816537 735 - 3013352 M a score=16932.000000 s hg38.chr9_KI270719v1_random 83653 2 + 176845 AT s panTro5.chr4 135107235 2 + 194502333 AT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58061 2 + 95358 AT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492644 2 - 115148730 AT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451667 2 + 190429646 AT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970676 2 + 189454096 AT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962757 2 - 40319822 AT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514453 2 - 9219162 AT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041132 2 + 135778131 AT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817272 2 - 3013352 AT i manLeu1.NW_012103277v1 M 735 C 0 s colAng1.NW_012114544v1 6040074 2 + 8656713 AT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129476643 2 - 190850796 AT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6541520 2 - 25294431 AT i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14959228 2 + 15034901 AT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26347418 2 - 93316391 AT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 982507 1 - 3201129 A- i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44078197 1 - 53741614 -T i canFam3.chr19 C 0 I 1 s dasNov3.JH569232 1815600 2 + 5974691 AT i dasNov3.JH569232 C 0 C 0 e cebCap1.NW_016107420v1 4102013 41 - 6311556 I a score=849103.000000 s hg38.chr9_KI270719v1_random 83655 82 + 176845 TGTTAGATTATGTAAGTG-ACACATACTATCTTAAAAGTTAATAAATCTCCCAGAAGAAATTAGACTCAGATGCTATATTTAT s panTro5.chr4 135107237 82 + 194502333 TGTTAGATTATGTAAGTG-ACACATGCTATCTTAAAAGTTAATAAATCTCCCAGAAGAAATTAGACTCAGATGCTATATTTAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58063 82 + 95358 TGTTAGATTATGTAAGTG-ACACATGCTATCTTAAAAGTTACTAAATCTCCCAGAAGAAATTAGACTCAGATGCTATATTTAT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492646 82 - 115148730 TGTTAGATTATGTAAGTG-ACACATGCTATCTTAAAAGTTAATAAATCTCCCAGAAGAAATTGGACTCAGATGCTATATTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451669 82 + 190429646 TGTTAGATTATGTGAGTG-ATACATGCTATCTTAAAAGTTAATAAATCTCCCAGAAGAAATTGGGGTCAGATGCTTTATTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970678 82 + 189454096 TGTTAGATTATGTGAGTG-ATACATGCTATCTTAAAAGTTAATAAATCTCCCAGAAGAAATTGGGGTCAGATGCTTTATTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962759 82 - 40319822 TGTTAGATTATGTGAGTG-ATACATGCTATCTTAAAAGTTAATAAATCTCCCAGAAGAAATTGGAGTCAGATGCTTTATTTAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514455 81 - 9219162 TGTTAGATTATGTGAGTG-ATACATGCTATCTTAAAAGTTAATAAATCTCCTAGAAGAAATTGGAGTCAGATGCTTTA-TTAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041134 82 + 135778131 TGTTAGATTATGTGAGTG-ATACATACTATCTTAAAAGTTAATAAATCTCCCAGAAGAAATTGGAGTCAGATGCTTTATTTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817274 81 - 3013352 TGTTAGATTATGTGAGTG-ATACATGCTATCTTAAAAGTTAATAAATCTCCCAGAAGAAATTGGAGTCAGATGCTTTA-TTAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040076 82 + 8656713 TGTTAGATTATGTGAGTG-ATACATGCTATCTTAAAAGTTAACAAATCTCCCAAAAGAAATTGGAATCAGATGCTTTCTTTAT i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129476645 82 - 190850796 TCTTAGATTATGTAAATG-ATACATGCTATTATAAAAGTTAATAAATCTCCCAGAAGCAATTGGACTCAGATGCTGTATTTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6541522 77 - 25294431 TGTTAGATTATGTAAATG-ATACATGC-----TAAAAGTTAATAAATCTCTCAGAAGTAATTGGACTCAGATGCTGTATTTAT i saiBol1.JH378129 C 0 C 0 s cebCap1.NW_016107420v1 4102054 82 - 6311556 TGTTAGATTACGTAAATG-ATACATGCTATCTTAAAAGTTAATAAATCTCCCAGAAGCAATTGGACTCAGATGCTGTATTTAT i cebCap1.NW_016107420v1 I 41 N 0 s aotNan1.NW_018507635v1 14959230 82 + 15034901 TGTTAGATTATGTAAATG-ATACATGCTATCTTAAAAGTTAATAAATCTCCCAGAAGCAATTGGACTCAGATGCTGTATTTAT i aotNan1.NW_018507635v1 C 0 I 66 s micMur3.chr14 26347420 79 - 93316391 TGTTAGGTTATG-AAACA-ATGCATGCTATCTTAAAAATCAATAAATCTCTCAGAAGAAATTGGACTC--ATGCTATGTTAAT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 982508 80 - 3201129 TGTTAGGTTAAG-AAACG-ATGCATGCTCTGTTAAAAGCCAATAAATTTC-CAGGAAGAATTAGACCCAGATGCTATATTTAT i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44078199 80 - 53741614 TGGTGTGTTATAGAGATGAAAAAATGCTATTTTAAAGAGTGATGAATTTTCCAGAGG---TGGGACTCAGATGCTACATTTAT i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1815602 49 + 5974691 ------------GAAAAG-ATAGTTATTATCGTAAGA-CTAATGTAC--------AGTAACTG------------ATATTTTT i dasNov3.JH569232 C 0 C 0 a score=91464.000000 s hg38.chr9_KI270719v1_random 83737 13 + 176845 TATGGAGAATTAA s panTro5.chr4 135107319 13 + 194502333 TATGGAGAATTAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58145 13 + 95358 TATGGAGAATTAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492728 13 - 115148730 TATGGAGAATTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451751 13 + 190429646 TATGGAGAATTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970760 13 + 189454096 TATGGAGAATTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962841 13 - 40319822 TATGGAGAATTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514536 13 - 9219162 TATGGAGAATTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041216 13 + 135778131 TATGGAGAATTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817355 13 - 3013352 TATGGAGAATTAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040158 13 + 8656713 TATGGAGAATTAA i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129476727 13 - 190850796 ggtaaaaaataaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6541599 13 - 25294431 GGTAaagaatcaa i saiBol1.JH378129 C 0 C 0 s micMur3.chr14 26347499 13 - 93316391 TATGGTAAATTAA i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 982588 13 - 3201129 TATGGTAAGTTAG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44078279 13 - 53741614 TGTGAAAAATATA i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1815651 7 + 5974691 --TAGCAGA---- i dasNov3.JH569232 C 0 C 0 e aotNan1.NW_018507635v1 14959312 66 + 15034901 I a score=140889.000000 s hg38.chr9_KI270719v1_random 83750 21 + 176845 GAAATACCTAAGGTTACTGTG s panTro5.chr4 135107332 21 + 194502333 GAAATACCTAAGGTTACTGTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58158 21 + 95358 GAAATACCTAAGGTTACTGTG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492741 21 - 115148730 GAAATACCTAAGGTTACTGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451764 21 + 190429646 GAAATACCTAAGGTTACTGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970773 21 + 189454096 GAAATACCTAAGGTTACTGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962854 21 - 40319822 GAAATACCTAAGGTTACTGTG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514549 21 - 9219162 GAAATACCTAAGGTTACTGTG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041229 21 + 135778131 GAAATACCTAAGGTTACTGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817368 21 - 3013352 GAAATACCTAAGGTTACTGTG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040171 21 + 8656713 GAAATACCTAAGGTTACTGCA i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26347512 21 - 93316391 GAAATAGCTAAGGTTACTGTG i micMur3.chr14 C 0 I 185 s otoGar3.GL873702 982601 21 - 3201129 GGAGTAGCTAAGGTCACAGTG i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44078292 21 - 53741614 GACGTAGCTAAGAATACTATT i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1815658 7 + 5974691 ----TACC--AGG-------- i dasNov3.JH569232 C 0 C 0 e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=347779.000000 s hg38.chr9_KI270719v1_random 83771 79 + 176845 ATCATCACTT--AGGAGTTTT--------GAATCAA-T-------TATATGAGAAACTAAAGAAGAAGCTTTGACTGGAAAAAAAATGAACCAAAAA s panTro5.chr4 135107353 79 + 194502333 ATCATCACTT--AGGAGTTTT--------GAATCAA-T-------TATATGAGAAACTAAAGAAGAAACTTTGATTGGAAAAAAAATGAACCAACAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58179 79 + 95358 ATCATCACTT--AGGAGTTTT--------GAATCAA-T-------TATATGAGAAACTAAAGAAGAAACTTTGACTGGAAAAAAAATGAACCAACAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492762 76 - 115148730 ATCATCACTT--AGGAGTTTT--------GAATCAA-T-------TATATGAGAAACTAAAGAAGAAACTCTGACTAGAAAAAAAATGA---AACAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451785 79 + 190429646 ATCATCACTT--AGGAGTTTT--------GAATCAA-T-------TAGATGAGAAACTAAAGAAGAAATTCTGACTAGAAAAGAATTGAACAAACAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970794 79 + 189454096 ATCATCACTT--AGGAGTTTT--------GAATCAA-T-------TAGATGAGAAACTAAAGAAGAAATTCTGACTAGAAAAGAATTGAACAAACAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962875 79 - 40319822 ATCATCACTT--AGGAGTTTT--------GAATCAA-T-------TAGATGAGAAACTAAAGAAGAAATTCTGACTAGAAAAGAATTGAACAAACAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514570 80 - 9219162 ATCATCACTT--AGGAGTTTT--------GAATCAATT-------TAGATGAGAAACTAAAGAAGAAATTCTGACTAGAAAAGAATTGAACAAACAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041250 79 + 135778131 ATCATCACTT--AGGAGTTTT--------GAATCAA-T-------TAGATGAGAAACTAAAGAAGAAATTCTGACTAGAAAAGAATTGAACAAACAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817389 79 - 3013352 ATCATCACTT--AGGAGTTTT--------GAATCAA-T-------TAGATGAGAAACTAAAGAAGAAATTCTGACTAGAAAAGAATTGAACAAACAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040192 79 + 8656713 ATCATCACTT--AAGAGTTTT--------GCATCAA-T-------TATATGAGAAACTAAAGAAGAAATTCTGACTAGAAAAGAATTGAACAAACAC i colAng1.NW_012114544v1 C 0 C 0 s otoGar3.GL873702 982622 88 - 3201129 GTCATCAACTAAAGCAGTTTT--------GAAGCAG-TAATAAAGTATATTAAAAAAAATAGGAAGGGACTCAATTAGGAGAAAAATAAAAAAACAA i otoGar3.GL873702 C 0 C 0 s canFam3.chr19 44078313 86 - 53741614 GTTATCATTA--AATAGGTTTTGAAGTAGGAATAGA-T-------TATATAAGAAACTAGAAAAGGGACTCTACACAGAAAAAAATAGATTAAAAA- i canFam3.chr19 C 0 I 357 s dasNov3.JH569232 1815665 19 + 5974691 -------------------------------------------------------------------ACTATTTCTTATACAAAAT----------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26347533 185 - 93316391 I e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=405514.000000 s hg38.chr9_KI270719v1_random 83850 97 + 176845 GAAAAAAA--TTATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTAGAAAAACCATACATTTTACTCTATCGATCTGTTAGGAAAAACTATAGA s panTro5.chr4 135107432 96 + 194502333 GAAAAAAA--TTATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTAGAAAA-CCATACATTTTACTCTATCAATCTGTTAGGAAAAACTATAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58258 97 + 95358 GAAAAAAA--TTATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTAGAAAAACCATACATTTTACTCTATCAATCTGTTAGGAAAAACTATAGA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492838 96 - 115148730 GAAAAAAA---TACA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTAGAAAACCCATACATTTTACTCTATCAATCTCTTAGGAAAAACTATAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451864 98 + 190429646 GAAAAAATACATATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTTAAACA-CCATACATTTTACTAAGTCAGTCTCCTAGGAAAAACTATAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970873 98 + 189454096 GAAAAAATACATATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTTAAACA-CCATACATTTTACTAAGTCAGTCTCCTAGGAAAAACTATAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34962954 98 - 40319822 GAAAAAATACATATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTTAAACA-CCATACATTTTACTAAGTCAGTCTCCTAGGAAAAACCATAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514650 98 - 9219162 GAAAAAATACATATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTTAAACA-CCATACATTTTACTAAGTCAGTCTCCTAGGAAAAACTATAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041329 98 + 135778131 GAAAAAATACATATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTTAAACA-CCATACATTTTGCTAAGTCAGTCTCCTAGGAAAAACTATAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817468 98 - 3013352 GAAAAAATACATATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTTAAACA-CCATACATTTTACTAAGTCAGTCTCCTAGGAAAAACTATAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040271 98 + 8656713 GAAAAAGTACATATA-TAAAGTCATTTTATTGGACACACATGCTAAAAATTTAAACA-CCATACATTTTGCTAAATCAGTCTCCTAGGAAAAACTATAAA i colAng1.NW_012114544v1 C 0 C 0 s otoGar3.GL873702 982710 94 - 3201129 GAAAG-----TTATAGTAAGCTAACATTATTAGATAGTCATGCTAAATATGAGAAAAACCATAAATTTTAATCTATCACCTCCATAGGAAAAA-TACAGA i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1815684 45 + 5974691 GAGAGAAA----ACA-CTGGGT-----------------------AACACTCAAATA---------------TAATCAGGGGTCTAGG------------ i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26347533 185 - 93316391 I e canFam3.chr19 44078399 357 - 53741614 I e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=109202.000000 s hg38.chr9_KI270719v1_random 83947 18 + 176845 ATATGATAGTGATTGCAT s panTro5.chr4 135107528 18 + 194502333 ATATGATAGTGATTGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58355 18 + 95358 ATATGATAGTGATTGCAT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492934 18 - 115148730 ATATGATAGTGATTGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451962 18 + 190429646 ATATGATAGTGATTGCAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970971 18 + 189454096 ATATGATAGTGATTGCAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963052 18 - 40319822 ATATGATAGTGATTGCAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514748 18 - 9219162 ATATGATAGTGATTGCAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041427 18 + 135778131 ATATGATAGTGATTGCAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817566 18 - 3013352 ATATGATAGTGATTGCAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040369 18 + 8656713 ATATGATACTGATGGCAC i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26347718 18 - 93316391 ATATGATAGTGATTGCAT i micMur3.chr14 I 185 C 0 s otoGar3.GL873702 982804 18 - 3201129 ATATGATTGTGTGTGCAT i otoGar3.GL873702 C 0 C 0 s dasNov3.JH569232 1815729 7 + 5974691 ACATAAT----------- i dasNov3.JH569232 C 0 C 0 e canFam3.chr19 44078399 357 - 53741614 I e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=122356.000000 s hg38.chr9_KI270719v1_random 83965 18 + 176845 TGATTCTACTTAGCAAAT s panTro5.chr4 135107546 18 + 194502333 TGACTCTGCTTAGCAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58373 18 + 95358 TGATTCTACTTAGCAAAT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492952 18 - 115148730 TGATTCTGCTTAGCAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451980 18 + 190429646 TGATTCTGCTTAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130970989 18 + 189454096 TGATTCTGCTTAGCAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963070 18 - 40319822 TGATTCTGCTTAGCAAAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514766 18 - 9219162 TGATTCTGCTTAGCAAAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041445 18 + 135778131 TGATTCTGCTTAGCAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817584 18 - 3013352 TGATTCTGCTTAGCAAAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040387 18 + 8656713 TGATTCTGCTGAGCAAAT i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26347736 18 - 93316391 GGATTCCACTTAGCATAT i micMur3.chr14 C 0 C 0 s otoGar3.GL873702 982822 18 - 3201129 GGATTCTGCTTAACACAT i otoGar3.GL873702 C 0 N 0 s canFam3.chr19 44078756 18 - 53741614 taatattattcagaaaat i canFam3.chr19 I 357 I 2 s dasNov3.JH569232 1815736 9 + 5974691 ---------CTAGTAAAT i dasNov3.JH569232 C 0 C 0 e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=248563.000000 s hg38.chr9_KI270719v1_random 83983 54 + 176845 TAAATGCAAAACTAAGATATTCACCAAATATAAAA----------------------------------------------------TATAGTTATTTTCTAAGAA s panTro5.chr4 135107564 54 + 194502333 TAAATGCAAAACTAAGATATTCACAAAATATAAAA----------------------------------------------------TATAGTTATTTTCTAAGAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58391 54 + 95358 TAAATGCAAAACTAAGATATTCATCAAATATAAAA----------------------------------------------------TATAGTTATTTTCTAAGAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90492970 50 - 115148730 TAAATGCAAAACTAGGATATTCACCAAATTTAAAA----------------------------------------------------TA----TATTTTCTAAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131451998 54 + 190429646 TAAATGCAAAACTAAGATATTCACCAAATATGAAA----------------------------------------------------TATAGTTATTTTCTTAGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971007 54 + 189454096 TAAATGCAAAACTAAGATATTCACCAAATATGAAA----------------------------------------------------TATAGTTATTTTCTTAGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963088 54 - 40319822 TAAATGCAAAACTAAGATATTCACCAAATATGAAA----------------------------------------------------TATAGTTATTTTCTTAGAC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514784 54 - 9219162 TAAATGCAAAACTAAGATATTCACCAAATATGAAA----------------------------------------------------TATAGTTATTTTCTTAGAC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041463 52 + 135778131 TAAATGCAAAACTAAGATATTCACCAAATATGAA------------------------------------------------------ATAGTTATTTTCTTAGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817602 54 - 3013352 TAAATGCAAAACTAAGATATTCACCAAATATGAAA----------------------------------------------------TATAGTTATTTTCTTAGAC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040405 54 + 8656713 TAAATGCAAAACTAAGATATTCACCAAATATGAAA----------------------------------------------------TATAGTTATTTTCTTCGAC i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26347754 55 - 93316391 CAAATGCAAAACTAAGATATTTAACAAATATGAAGC---------------------------------------------------TATAGTTATTTCCTAAGAA i micMur3.chr14 C 0 I 23 s canFam3.chr19 44078776 106 - 53741614 taaggaaaatagttatgtatttaacaacaacaaaactctatgtaagttgaccgagtagttcaaactgtgttgtccaagagtccactgTATAGTTAGCCTCTAAAAA i canFam3.chr19 I 2 I 45 s dasNov3.JH569232 1815745 39 + 5974691 -------TAGGCTGGAATA--CACCAGAA--GAAATCCG------------------------------------------------TAGAGTTGCTT-------- i dasNov3.JH569232 C 0 C 0 e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=45721.000000 s hg38.chr9_KI270719v1_random 84037 17 + 176845 ATAAAA-------------------CTCACACATTC s panTro5.chr4 135107618 22 + 194502333 ATAAAATA--------------AAACTCACATATAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58445 17 + 95358 ATAAAA-------------------CTCACACATAC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493020 22 - 115148730 ATAAAATA--------------AAACTCACACATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452052 17 + 190429646 ATAAAA-------------------CCCACATGTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971061 17 + 189454096 ATAAAA-------------------CCCACACGTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963142 17 - 40319822 ATAAAA-------------------CCCACACGTAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514838 17 - 9219162 ATAAAA-------------------CCCACACGTAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041515 17 + 135778131 ATAAAA-------------------CCCACACATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817656 17 - 3013352 ATAAAA-------------------CCCACACGTAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040459 17 + 8656713 ATAAAA-------------------CCCACACGTAA i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44078927 36 - 53741614 ataaaataaaaaataaaaGGTGAAACCCATGCATCT i canFam3.chr19 I 45 C 0 s dasNov3.JH569232 1815784 7 + 5974691 -----------------------------CACCTTC i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26347809 23 - 93316391 I e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=340399.000000 s hg38.chr9_KI270719v1_random 84054 56 + 176845 TGGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACATGAAGG s panTro5.chr4 135107640 56 + 194502333 TGGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACAAGAAGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58462 56 + 95358 TGGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACATGAAGG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493042 56 - 115148730 TGGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACAAGAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452069 54 + 190429646 TGGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATT--CTGTTAACAAGAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971078 56 + 189454096 TGGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACAAGAAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963159 56 - 40319822 TGGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACAAGAAGG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514855 56 - 9219162 TGGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACAAGAAGG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041532 56 + 135778131 TGATGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACAAGAAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817673 56 - 3013352 TGGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACAAGAAGG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040476 56 + 8656713 TTGTGGCAACTGCCATTTTTAGCAGAAACCAAAACTATTTCCTGTTAACAAGAAGG i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26347832 56 - 93316391 TGGTGACAACTACCATTTTTAGCTGAAACCAAAACAATTTTCTTCTAACATGAAGG i micMur3.chr14 I 23 I 186 s canFam3.chr19 44078963 54 - 53741614 TTGTGGTGGCTGAGA-TTTTAGT-GAATCCAAAACTATTTCCTGCAAAAATGAAGG i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1815791 26 + 5974691 ------------------CCAGCAGTAACTAAAGTTGTTACCTA------------ i dasNov3.JH569232 C 0 C 0 e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=627768.000000 s hg38.chr9_KI270719v1_random 84110 140 + 176845 AAAAACCATCATTGAACACTCAAGTAATAATCAGGGGACTAGGATGGACTTTCAGTAAGATACCACTGGAATATACCTGGACTAAATCTA---------------------------------------------TTCTGACAAAATTAAGTATACCAACCGAATAGTTTTGTGTGTGCATTTGT s panTro5.chr4 135107696 140 + 194502333 AAAAACCATCATTGAACACTCAAGTAATAATGAGGGGACTAGGATGGACTCTCAGTAAGAAACCACTGGAATATACCTGGACTAAATCTA---------------------------------------------TTCTAACAGAATTAAGTACACCAACCGAATAGTTTTGTGTGTGCTTTTTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58518 138 + 95358 AAAAACCATCATTGAACACTCAAGT-ATAATCAGGGGACTAGGATGGACT-TCAGTAAGAAACCACTGGAATATACCTGGACTAAATCTA---------------------------------------------TTCTAACAAAATTAAGTATACCAACCGAATAGTTTTGTGTGTGCATTTGT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493098 140 - 115148730 AAAAACCATCATTGAACACTCAAGTAAAAATCAGGGGACTAGGATGGACTCTCAGTAAGAAACAGTTGGAATATACCTGGACTAAATCTA---------------------------------------------TTCTACTAAAATTAAGTACACCAACCGAATAGTTTTGTGTGTGCATTTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452123 140 + 190429646 AAAAACCGTCATCGAACACTCAAGTAATAATCAGGGGACTAGGATGGACTCTCAGTAAGAAACAATTAGAATATACCTGGACTAAATCTA---------------------------------------------TTCTAACAAAATTAAGTATACCAACTGAATAGTTTTGTGTGCGCAAATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971134 140 + 189454096 AAAAACCATCATCGAACACTCAAGTAATAATCAGGGGACTAGGATGGACTCTCAGTAAGAAACAATTAGAATATACCTGGACTAAATCTA---------------------------------------------TTCTAACAAAATTAAGTATACCAACTGAATAGTTTTGTGTGCGCAAATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963215 140 - 40319822 AAAAACCATCATCGAACACTCAAGTAATAATCAGGGGACTAGGATGGACTCTCAGTAAGAAACAATTAGAATATACCTGGACTAAATCTA---------------------------------------------TTCTAACAAAATTAAGTATACCAACTGAATAGTTTTGTGTGCGCAAATGT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4514911 140 - 9219162 AAAAACCATCATCGAACACTCAAGTAACAATCAGGGGACTAGGATGGACTCTCAGTAAGAAACAATTAGAATATACCTAGACTAAATCTA---------------------------------------------TTCTAACAAAATTAAGTATACCAACTGAATAGTTTTGTGTGTGCAAATGT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041588 140 + 135778131 AAAAACCATCATCGAACACTCTAGTAATAATCAGGGGACTAGGATGGACTCTCAGTAAGAAACAATTAGAATATACCTGGACTAAATCTA---------------------------------------------TTCTAACAAAATTAAGTATACCAACTGAATAGTTTTGTGTGTGCAAATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817729 140 - 3013352 AAAAACCATCATCGAACACTCAAGTAACAATCAGGGGACTAGGATGGACTCTCAGTAAGAAACAATTAGAATATACCTGGACTAAATCTA---------------------------------------------TTCTAACAAAATTAAGTATACCAACTGAATAGTTTTGTGTGTGCAAATGT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040532 140 + 8656713 AAAAACCATCATCGAACACTCAAGTAATAATCCGGGGACTAGGATGGATTCTCAGTAAGAAACGATTAGAATATACCTGGACTAAATCTA---------------------------------------------TTCTAACAAAATTAAGTATACCAACTGAATAGTTTTGTGTGGGCAAATGT i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44079017 175 - 53741614 -GAAATAATTGTTGAAAACTC-------AGTCAAGAAACTAGGAATGAATTTCAGTAAGAAGGGATTGGAAAACACATGAATTCCATCTGCACAGAAGTATCACTTGTCCAAAGTCTTATGTCTTATCTAAACTTCTCTACCAAAACTAAATAAAGTGACCAAATAATTTTACTTTTTTTTTT-- i canFam3.chr19 C 0 C 0 s dasNov3.JH569232 1815817 36 + 5974691 -----------------------------------------------------------------------------------AACTCTG---------------------------------------------TTAAAAAAAAATTTGTTTT-------------TTTGGTTTGT-------- i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26347888 186 - 93316391 I e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=56714.000000 s hg38.chr9_KI270719v1_random 84250 8 + 176845 -TTTTACTA s panTro5.chr4 135107836 8 + 194502333 -TTTTACTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58656 8 + 95358 -TTTTACTA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493238 8 - 115148730 -TTTTACTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452263 8 + 190429646 -TTTTACTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971274 8 + 189454096 -TTTTACTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963355 8 - 40319822 -TTTTACTA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515051 8 - 9219162 -TTTTACTA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041728 8 + 135778131 -TTTTACTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817869 8 - 3013352 -TTTTACTA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040672 8 + 8656713 -TTTTACTA i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26348074 8 - 93316391 -tTTTACTG i micMur3.chr14 I 186 C 0 s canFam3.chr19 44079192 8 - 53741614 -TTCCACTA i canFam3.chr19 C 0 I 162 s dasNov3.JH569232 1815853 9 + 5974691 TTTTAACTC i dasNov3.JH569232 C 0 C 0 e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=371968.000000 s hg38.chr9_KI270719v1_random 84258 72 + 176845 TATACTTTTATAATCTCAAAAGTACCTAAAAGGAGGCAAAACAAGAAAGGATTTGTCTACAGAAAGT-AAAAA s panTro5.chr4 135107844 71 + 194502333 TATACTTT-ATAATCCCAAAAGTACCTAAAAGGAGGCAAAACAAGAAAGGATTTGTCTACAGAAAGT-AAAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58664 72 + 95358 TATACTTTTATAATCTCAAAAGTACCTAAAAGGAGGCAAAACAAGAAAGGATTTGTCTACAGAAAGT-AAAAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493246 72 - 115148730 TATACTTTTATAATCTCAAAAGTACCTAAAAGAAGGCAAAGCAAGAAAGGATTTGTCTACAAAAAGT-AAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452271 73 + 190429646 CATACTTTTATAATTTCAAAAGTACTTAAACGGAGGTAAAGCAAGAGAGGACTTGTCTACAGAAAGTGAAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971282 73 + 189454096 CATACTTTTATAATTTCAAAAGTACTTAAACGGAGGTAAAGCAAGAGAGGACTTGTCTACAGAAAGTGAAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963363 73 - 40319822 CATACTTTTATAATTTCAAAAGTACTTAAACGGAGGTAAAGCAAGAGAGGACTTGTCTACAGAAAGTGAAAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515059 73 - 9219162 CATACTTTTATAATTTCAAAAGTACTTAAACGGAGGTAAAGCAAGAGAGGACTCGTCTACAGAAAGTGAAAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041736 73 + 135778131 CATACTTTTATAATTTCAAAAGTACTTAAACGGAGGTAAAGCAAGAGAGGACTCGTCTACAGAAAGTGAAAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817877 73 - 3013352 CATATTTTTATAATTTCAAAAGTACTTAAACGGAGGTAAAGCAAGAGAGGACTCGTCTACAGAAAGTGAAAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040680 73 + 8656713 TATACTTTTATAATTTCAAAAGTACCTAAACGGAGGCAAAGCAAGAAAGGACTCGTCTACAGAAAATGAAAAA i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26348082 72 - 93316391 TATGCTTTCAAAATCTCAAATGTACCTAAAAAGAGGCAAGGCCAGAAAGGACTTGTCTACAGAAAGT-AAAAA i micMur3.chr14 C 0 I 202 s dasNov3.JH569232 1815862 62 + 5974691 TGTACTCTCA-----CCACAAT--CTTAAAAGGAGG----ATCACAGAGGACTACTCTGCAGAAAATGTAATG i dasNov3.JH569232 C 0 C 0 e canFam3.chr19 44079200 162 - 53741614 I e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=6006.000000 s hg38.chr9_KI270719v1_random 84330 1 + 176845 T s panTro5.chr4 135107915 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58736 1 + 95358 T i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493318 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452344 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971355 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963436 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515132 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041809 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817950 1 - 3013352 T i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040753 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s dasNov3.JH569232 1815924 1 + 5974691 T i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26348154 202 - 93316391 I e canFam3.chr19 44079200 162 - 53741614 I e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=937784.000000 s hg38.chr9_KI270719v1_random 84331 173 + 176845 -AAGAATGATTATAAAATAT-TGTTAAAGAAAAGACAC--TGCACAGAATAGTCATGGAGATTTCTGTAC-TAATCACCTTGATCATAATGAATAATCACTGAATTTCACTGGCCTATTTTCCTCCACAAGATTCTATGTTAGG-TAAGCAACTTTGGGTAATTCA--------------------------------------ATAATAGGAAAGA s panTro5.chr4 135107916 173 + 194502333 -AAGAATGATTATAAAATAT-TGTTAAAGAAAAGACAC--TGCACAGAATAGTCATGGAGATTTCTATAC-TAATCACCTTGATCCTAATGAATAATCACTGAATTTCACTGGCCTATTTTCCTCCACAAGATTCTATGTTAGG-TAAGCAACTTTGGGTAATTCA--------------------------------------ATAATAGGAAAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58737 173 + 95358 -AAGAATGATTATAAAATAT-TGTTAAAGAAAAGACAC--TGCACAGAATAGTCATGGAGATTTCTGTAC-TAATCACCTTGATCATAATGAATAATCACTGAATTTCACTGGCCTATTTTCCTCCACAAGATTCTATGTTAGG-TAAGCAACTTTGGGTAATTCA--------------------------------------ATAATAGGAAAGA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493319 174 - 115148730 -AAGAATGACTATAAAATAT-CGTCAAAGAAAAGACAC--TGCACAGAATAGTCACGGAGATTTCTGTACTTAATCAGCTTGATCATAATGAATAATCACTGAATTTCATTTGCCTATTTTCCTCCACAAGAGTCTACGTTATG-TAAGCAACTTTGGGTAATTCA--------------------------------------ATAATAGGAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452345 211 + 190429646 -AAGAATGATTATAAAATAG-TGTCAAAGAAAAGACAC--CGCACAGAATAGTCACAGAGATTTCTGTAC-TAATCACTTTGATCCTAATGAATAATCCCTGAATTTCATTGGCCTATTTTCCTCCACGAGATTCCATGTTATG-TAAGCAACTTTGGATAATTCAATCTAATTTATTTCCTAGCATAGCCAAGGAAAACACTGATAATAGGAAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971356 211 + 189454096 -AAGAATGATTATAAAATAG-TGTCAAAGAAAAGACAC--CGCACAGAATAGTCACAGAGATTTCTGTAC-TAATCACTTTGATCCTAATGAATAATCCCTGAATTTCATTGGCCTATTTTCCTCCACGAGATTCCATGTTATG-TAAGCAACTTTGGATAATTCAATCTAATTTATTTCCTAGCATAGCCAAGGAAAACACTGATAATAGGAAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963437 211 - 40319822 -AAGAATGATTATAAAATAG-TGTCAAAGAAAAGACAC--CGCACAGAATAGTCACAGAGATTTCTGTAC-TAATCACTTTGATCCTAATGAATAATCCCTGAATTTCATTGGCCTATTTTCCTCCACGAGATTCCATGTTATG-TAAGCAACTTTGGATAATTCAATCTAATTTATTTCCTAGCATAGCCAAGGAAAACACTGATAATAGGAAAGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515133 211 - 9219162 -AAGAATGATTACAAAATAG-TGTCAAAGAAAAGACAC--CACACAGAATAGTCACAGAGATTTCTGTAC-TAATCACTTTGATCCTAATGAATAATCCCTGAATTTCATTGGCCTATTTTCCTCCACGAGATTCCATGTTATG-TAAGCAACTTTGGATAATTCAATCTAATTTATTTCCTAGCATAGCCAAGGAAAACACTGATAATAGGAAAGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79041810 211 + 135778131 -AAGAATGATTATAAAATAG-TGTCAAAGAAAAGACAC--CACACAGAATAGTCACAGAGATTTCTGTAC-TAATCACTTTGATCCTAATGAATAATCCCTGAATTTCACTGGCCTATTTTCCTCCACAAGATTCCATGTTATG-TAAGCAACTTTGGATAATTCAGTCTAATTTATTTCCTAGCATAACCAAGGAAAACACTGATAATAGGAAAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2817951 211 - 3013352 -AAGAATGATTACAAAATAG-TGTCAAAGAAAAGACAC--CACACAGAATAGTCACAGAGATTTCTGTAC-TAATCACTTTGATCCTAATGAATAATCCCTGAATTTCATTGGCCTATTTTCCTCCACGAGATTCCATGTTATG-TAAGCAACTTTGGATAATTCAATCTAATTTATTTCCTAGCATAGCCAAGGAAAACACTGATAATAGGAAAGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040754 211 + 8656713 -CAGAATGATTATAAAATAG-TGTCAAAGAAAAGACAC--CGCACAGAATAGTCACAGAGATTTCTGTAC-TAATCACCTTGATCATAATGAATAATTCCTGAATTTCATTGGCCTATTTTCCTCCACAAGATTCCATGTTATG-TAAGCAACTTTGGATAATTCAATCTAATTTATTTCCTAGCATAACCAAGGAAAACACTGATAATAGGAAAGA i colAng1.NW_012114544v1 C 0 C 0 s canFam3.chr19 44079362 192 - 53741614 -atgaataaataaataacatcttttaaaaaaTAAATA-----AATGAGACATCTGTAGAGATCTCTGATC----ACAACTTTATCAGAATGAATAATCATTGAAGACTCTCAGCCTTTCTTCTTTAGTGGAATTC-ATGTTTTG-TAAGCAACCTTTGATAATTCAATATAATCTACTTTCTA------------AAAATTTTGATCA-AAGAAAGA i canFam3.chr19 I 162 I 1 s dasNov3.JH569232 1815925 198 + 5974691 AAGTACTGTTTATAAAATAC-TGACCAGTGAAAGACACATTGTGTAAAATAGTCACAGAGACTCCTTCAC-TAATCACCTTGACTTGATTTAATACTCAATGAAGGCCATTGACTTTTTGTCCTATACTAGATTCCATGGTATGTTCAGCAAACTTTATTCATTTAATCTGCTTCCT-----------------GAGAACCCTAATAAGAGGATGAG i dasNov3.JH569232 C 0 C 0 e micMur3.chr14 26348154 202 - 93316391 I e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=103526.000000 s hg38.chr9_KI270719v1_random 84504 17 + 176845 TGTTTCTTTTATAACAT s panTro5.chr4 135108089 17 + 194502333 TGTTTCTTTTATAACAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58910 17 + 95358 TGTTTCTTTTATAACAT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493493 15 - 115148730 TGTTTCTTTTATAAC-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452556 17 + 190429646 TGTTTCCTTTATAACAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971567 17 + 189454096 TGTTTCCTTTATAACAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963648 17 - 40319822 TGTTTCCTTTATAACAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515344 17 - 9219162 TGTTTCCTTTATAACAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042021 17 + 135778131 TGTTTCCTTTATAACAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818162 17 - 3013352 TGTTTCCTTTATAACAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040965 17 + 8656713 TGTTTCTTTTAGAACAT i colAng1.NW_012114544v1 C 0 C 0 s micMur3.chr14 26348356 17 - 93316391 TGTTTCATTTATAATAT i micMur3.chr14 I 202 C 0 s canFam3.chr19 44079555 17 - 53741614 TGTTTCATCAATAATAC i canFam3.chr19 I 1 C 0 s dasNov3.JH569232 1816123 17 + 5974691 TGTTTCATTAACAGTGC i dasNov3.JH569232 C 0 C 0 e aotNan1.NW_018507635v1 14959312 66 + 15034901 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=1304293.000000 s hg38.chr9_KI270719v1_random 84521 187 + 176845 ATCTGATTTGTACAACTATTTGAAAT--ACATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACACAGCTATTTATTGTGAATTTGTATAAAGACAGCTCATCCTTAGAACT----TAATAGAC--TAGGATTCTTGGTAAAGTATATATTGTATATCTGAAAAATGTAACAGTGACAATATTAAAGTAT s panTro5.chr4 135108106 187 + 194502333 ATCTGATTTGTGCAACTATTTGAAAT--ACATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACACAGCTATTTATTGTGAATTTGTATAAAGACAGCTCATCCTTAGAACA----TAATAGAC--TAGGATTCTTGGTAAAGTATACATTGTATATCTGAAAAATGTAATAGTGACAATATTAAAGTAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 58927 187 + 95358 ATCTGATTTGTACAACTATTTGAAAT--ACATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACACAGCTATTTATTGTGAATTTGTATAAAGACAGCTCATCCTTAGAACA----TAATAGAC--TAGGATTCTTGGTAAAGTATATATTGTATATCTGAAAAATGTAATAGTGACAATATTAAAGTAT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493508 187 - 115148730 ATCTGATTTGTACAACTATTTGAAAT--ACATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACACAGCTATTTATTGTGAATTTGTATAAAGACAGTTTATCCTTAGAACA----TAATAGAC--TAGGATTCTTGGTAAAGTATATATTGTATATCTGAAAAATGTAATAGTGACAATATTAAAGTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452573 187 + 190429646 ATCTGATTTGTACAACTATTTGACAT--GCATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACGCAGCTATTTATTGTGAGTTTATATAAAGACAGTTCATCCTTAGAACA----TGATAGAC--TAGGATTCTTGGTAAAGTATATATTGTGTATCTGAAAAATGTAATCGTGACAATATTAAAGTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971584 187 + 189454096 ATCTGATTTGTACAACTATTTGACAT--GCATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACCCAGCTATTTATTGTGAGTTTATATAAAGACAGTTCATCCTTAGAACA----TGATAGAC--TAGGATTCTTGGTAAAGTATATATTGTGTATCTGAAAAATGTAATCGTGACAATATTAAAGTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963665 187 - 40319822 ATCTGATTTGTACAACTATTTGACAT--GCATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACGCAGCTATTTATTGTGAGTTTATATAAAGACAGTTCATCCTTAGAACA----TGATAGAC--TAGGATTCTTGGTAAAGTATATATTGTGTATCTGAAAAATGTAATCGTGACAATATTAAAGTAT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515361 187 - 9219162 ATCTGATTTGTACAACTATTTGACAT--GCATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACGCAGCTATTTATTGTGAGTTTATATAAAGACAGTTCATCCTTAGAACA----TGATAGAC--TAGGATTCTTGGTAAAGTATATAGTGTGTCCCTGAAAAATGTAATCGTGACAATATTAAAGTAT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042038 187 + 135778131 ATCTGATTTGTACAACTATTTGAAAT--GCATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACGCAGCTATTTATTGTGAATTTATATAAAGACAGTTCATCCTTAGAACA----TGATAGAC--TAGGATTCTTGGTAAAGTATATATTGTGTATCTGAAAAATGTAATCGTGACAATATTAAAGTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818179 187 - 3013352 ATCTGATTTGTACAACTATTTGACAT--GCATTTT--ATACTATAAAATAAAAATGGTAACTCTTATTTACGCAGCTATTTATTGTGAGTTTATATAAAGACAGTTCATCCTTAGAACA----TGATAGAC--TAGGATTCTTGGTAAAGTATATAGTGTGTCCCTGAAAAATGTAATCGTGACAATATTAAAGTAT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6040982 187 + 8656713 ATCTGATTTGTACAACTATTTGAAAT--ATATTTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTACGCAACTATTTATTGTGAATTTGTATAAAGACAGTTCATCCTTAGAACA----TGATAGAC--TAGGATTCTTGGTGAAGTATATATTGTATATCTGAAAAATGTAATCATGACAATATTAAAGTAT i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14959378 187 + 15034901 ATCTGATTTGTACAACTATTTGAAAT--ACAATTT--ATGCTATAAAATAAAAATGGTAACTCTTATTTGCACAGCTATTTATTGTGAAATTGTATAGAGACATTTCATCCTTAGAACT----TGATAGGC--TAGGATTCTTGGTAAAGTTTATATTGTATATCTGAAAAATATAACAGTGACAATATTAAAGTAT i aotNan1.NW_018507635v1 I 66 C 0 s micMur3.chr14 26348373 186 - 93316391 ATCTGATCTATACAGTTTTTTGGGAT--ACGTTTT-CATGCTACAAAATAAAAATGGTAACTTTGATTTGTATAGCTATTTCCTATGCATTTGTTTAGAGAGAGTCCATCCTGAGAACA----CAATAAGC--CAGTTTTCTTGGCAAATAATATTTTCTATATCTGAAAAA--CAATAGTGACAACATCAAGGCAT i micMur3.chr14 C 0 C 0 s canFam3.chr19 44079572 181 - 53741614 ATCTGATTAGGATAGTTATTTGAAAT--ATATTTTTCAGGCTTCAAAATAAAATTGATAGCTCCTATTTATACAGCTGTGT-TTGTGTGTGTGT---------GTTCATGTGTGTGAGAGGTTTTATAGA----AGGATCCTaaaaaaaataaaaataaaaaaaataaaaaaataaaaaataaaaaaaaagaaGGAT i canFam3.chr19 C 0 I 82 s dasNov3.JH569232 1816140 186 + 5974691 ATCTGATTAG-AAAGCTATTTCAAATAAATATTTC--ATTCTCTAAGATAAAAATGGAAGAATTTATTTGTAGAGGAATTCATTGTGAGTTTGCTT----ACATTCTATTCTGAAAACC----TGATAACCTTTAGGTTTCTCAGCAAAGTATATATTATCTATGTGAAAAATTTAATGGTGACAACGTTAAGATAT i dasNov3.JH569232 C 0 C 0 e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=1321561.000000 s hg38.chr9_KI270719v1_random 84708 208 + 176845 TGCCACTTAGTGCTGTGTTACCTAAAGAAATTGTCACTTTCTGTCAGTCTTATCACTGACATTTAAATTTCAGATATAGGTGAATTCAATATTGAAGTGAATAGAGCTACCGATATTTGCTTTCCTAATATTCATGGAAGTTGTTGTTGACCTCTCAT----AG----ATAAATAAGCAAATAATATCTTCAAAAAT--ATATCTAACTTGACTCAAA s panTro5.chr4 135108293 208 + 194502333 TGCCACCTAGTGCTGTGTTACCTAAAGAAATTGTCACTTTCTGTCACTCTTATCACTGACATTTAAATTTCAGATATAGGTGAATTAAATATTGAAGTGAATAGAGCTACCGACATTTGCTTTCCTAATATTCATGGAAGTTGTTGTTGACCTCTCAT----AG----ATAAATAAGCAAATAATATCTTCAAAAAT--ATATCTAACTTGACTCCAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59114 207 + 95358 TGCCACTTAGTGCTGTGTTACCTAAAGAAATTGTCACTTTCTGTCA-TCCTATCACTGACATTTAAATTTCAGATATAGGTGAATTCAATATTGAAGTGAATAGAGCTACCGACATTTGCTTTCCTAATATTCATGGAAGTTGTTGTTGACCTCTCAT----AG----ATAAATAAGCAAATAATATCTTCAAAAAT--ATATCTAACTTGACTCAAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493695 208 - 115148730 TGCCACTTAGTGCTATGTTACCTAAAGAAAGTGTCACTTTCTGTCTGTCTTATCACTGACATTTAAATTTCAGATATAGGTGAATTAAATATTGAAGTGAATAGAGCGACCAACATTTGCTTTCCTAATATTCATGGAAGTTGTTGTTGACCTCTCAT----AG----ATAAATAAGCAAATAATATCTTCAAAAAT--ATATCTAACTTGACTCAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452760 205 + 190429646 TGCCACTTAGTGCTATGTTACCTAAAGAAAGTTCCACGTTCTGTCAGTCTGATCACTGACATTTAAATTTCAGATATAGGTGAATTAAATATTGAGGTGAATAGAGCTATAGACATTTGTTTTCCTAATTTTCATGGAA---GTTGTTGACTTTTCAT----AG----ATAAATAAGCAAATAACATCTTCAAAAAT--ATATCTAACTTGACTCAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971771 205 + 189454096 TGCCACTTAGTGCTATGTTACCTAAAGAAAGTTCCACGTTCTGTCAGTCTGATCACTGACATTTAAATTTCAGATATAGGTGAATTAAATATTTAAGTGAATAGAGCTATAGACATTTGTTTTCCTAATTTTCATGGAA---GTTGTTGACTTTTCAT----AG----ATAAATAAGCAAATAACATCTTCAAAAAT--ATATCTAACTTGACTCAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34963852 205 - 40319822 TGCCACTTAGTGCTATGTTACCTAAAGAAAGTTCCACGTTCTGTCAGTCTGATCACTGACATTTAAATTTCAGATATAGGTGAATTAAATATTGAAGTGAATAGAGCTATAGACATTTGTTTTCCTAATTTTCATGGAA---GTTGTTGACTTTTCAT----AG----ATAAATAAGCAAATAACATCTTCAAAAAT--ATGTCTAACTTGACTCAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515548 205 - 9219162 TGCCACTTAGTGCTATGTTACCTAAAGAAAGTTCCACGTTCTGTCAGTCTGATCACTGACATTTAAATTTCAGATATAGGTGAATTAAATATTGAAGTGAATAGAGCTATAGACATTTGCTTTCCTAATTTTCATGGAA---GTTGTTGACTTTTCAT----AG----ATAAATAAGCAAATAACATCTTCAAAAAT--ATATCTAACTTGACTCAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042225 205 + 135778131 TGCCACTTAGTGCTATGTTACCTAAAGAAAGTTCCACGTTCTGTCAGTCTGATCACTGACATTTAAATTTCAGATATAGGTCAATTAAATATTGAAGTGAATAGAGCTATAGACATTTGCTTTCCTAATTTTCATGGAA---GTTGTTGATTTTTCAT----AG----ATTAATAAGCAAATAACATCATCAAAAAT--ATATCTAACTTGACTCAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818366 205 - 3013352 TGCCACTTAGTGCTATGTTACCTAAAGAAAGTTCCACGTTCTGTCAGTCTGATCACTGACATTTAAATTTCAGATATAGGTGAATTAAATATTGAAGTGAATAGAGCTATAGACATTTGCTTTCCTAATTTTCATGGAA---GTTGTTGACTTTTCAT----AG----ATAAATAAGCAAATAACATCTTCAAAAAT--ATTTCTAACTTGACTCAAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041169 205 + 8656713 TGCCACTTAGTGCTATGTTACCTAAAGAAAGTGCCACTTTCTGTCAGTCTGATCACTGACATTTAAATTTCAGATATAGGTGAATTAAATATTGAAGTGAATAGAGCTATAGACATTTGTTTTCCTAATTTTCATGGAA---GTTGTTGACTTTTCAT----AG----ATAAATAAGCAAATAATATCTTCAAAAAT--ATATCCAACTTGACTCAAA i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14959565 210 + 15034901 TGCCACTTAGTGCTATGTTACCTAAAGACAGTGTCACTTTCTGTCAGTCTGATCACTAACATTTAAATTTCAGATATAAGTGAATTAAATATTGAGGTGAATACAGCTACAGACATTTGCTTTCCTAATATTCATGAAAGTTGTTGTTGACCTCTCATAGAGAG----ATAAATAAGCAAATAATATCTTCAAAAAT--ATATCTAAC--AACTCAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26348559 209 - 93316391 TGCCATTTAGTACTATCTTACCTAAAGATAGTGTCAGTTTTTCTCAGTCTGAAGACTGACATAC-AATTTTAGATGCAGGTGAATTGAATGTTGAAATGGATAGAGAGACAGACATTTGCTTTACCCATGTTCATGGAAATTGTTGTTGGCATCAGAG----AG----GTAAATGAGCAAATAAGAACTTTAAAAACAGATATCCAACTTGACTCAAA i micMur3.chr14 C 0 C 0 s dasNov3.JH569232 1816326 205 + 5974691 AACTACTTAGTGCTGTCTTACCTAAAGAGAATGCCATTCTTTTTCAGCCTGATAATTTATGTATAAATTCTAGATATAACTATATTGAATGTTGAAGTGAAGCAAGAGAC--ACATTTGCTTTATTCATATCTACAGAAGTTATTGTTGGCTTCACAC----AGGGAAGTAAATAAACACATTA-AGCTCAAAAAGG--AGATCAAA--TAAATGA-- i dasNov3.JH569232 C 0 C 0 e canFam3.chr19 44079753 82 - 53741614 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=216592.000000 s hg38.chr9_KI270719v1_random 84916 30 + 176845 TACTTCTAAGTATTTTGTCATTTGAAGGGA s panTro5.chr4 135108501 30 + 194502333 TACTTCTAAGTATTTTGTCATTTGAAGGGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59321 30 + 95358 TACTTCTAAGTATTTTGTCATTTGAAGGGA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493903 30 - 115148730 CATTTCTAAGTATTTTGTCATTTGAAGGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452965 30 + 190429646 CATTTCTAAGTATTTTGTCATTTGAAGGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130971976 30 + 189454096 CATTTCTAAGTATTTTGTCATTTGAAGGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34964057 30 - 40319822 CATTTCTAAGTATTTTGTCATTTGAAGGGA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515753 30 - 9219162 CATTTCTAAGTATTTTGTCATTTGAAGGGA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042430 30 + 135778131 CATTTCTAAGTATTTTGTCATTTGAAGGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818571 30 - 3013352 CATTTCTAAGTATTTTGTCATTTGAAGGGA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041374 30 + 8656713 TATTTCTAAGTATTTTGTCATTTGAAGGGA i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14959775 29 + 15034901 TGTATTTCAGTATTTTGTCATTC-AAAGGA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26348768 30 - 93316391 CCCTTCTAAATATTTTATCATTTGAATGAA i micMur3.chr14 C 0 C 0 s canFam3.chr19 44079835 30 - 53741614 TATCTCTTAGTATTGTATTAGGGAAAGAGA i canFam3.chr19 I 82 I 14 s dasNov3.JH569232 1816531 30 + 5974691 CATCTCTAAATATTTTGGAATTTGAAGGAG i dasNov3.JH569232 C 0 C 0 e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=100064.000000 s hg38.chr9_KI270719v1_random 84946 24 + 176845 TATGAGCAAGTTGAG---AAGAAGAAA s panTro5.chr4 135108531 24 + 194502333 TATGAGCAAGTTGAG---AAGAAGAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59351 24 + 95358 TATGAGCAAGTTGAG---AAGAAGAAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493933 21 - 115148730 TATGAGAAAGTTG------AGAAGAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131452995 21 + 190429646 TATGAGAAAGTTG------AGAAGAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130972006 21 + 189454096 TATGAGAAAGTTG------AGAAGAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34964087 21 - 40319822 TATGAGAAAGTTG------AGAAGAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515783 21 - 9219162 TATGAGAAAGTTG------AGAAGAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042460 21 + 135778131 TATGAGAAAGTTG------AGAAGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818601 21 - 3013352 TATGAGAAAGTTG------AGAAGAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041404 21 + 8656713 TATGAGAAAGTTG------AGAAGAAG i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14959804 24 + 15034901 TATGAGAAAGTTGAG---AAGACAAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26348798 27 - 93316391 AATGAAAAACTTGGGGACAATAAGAAA i micMur3.chr14 C 0 C 0 s dasNov3.JH569232 1816561 23 + 5974691 TATGAAAAGCAAGGG----AGCTAAAA i dasNov3.JH569232 C 0 C 0 e canFam3.chr19 44079865 14 - 53741614 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=224440.000000 s hg38.chr9_KI270719v1_random 84970 31 + 176845 TGTGGAGAGAGAAATATTCATGAAAACTAAA s panTro5.chr4 135108555 31 + 194502333 TGTGGAGAGAGAAATACTCATGAAAACTAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59375 31 + 95358 TGTGGAGAGAGAAATATTCATGAAAACTAAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493954 31 - 115148730 TGCAGAGAGATAAATATTCACGAAAACTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131453016 31 + 190429646 TGCAAAGAGATAAATATTCATGAAAACTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130972027 31 + 189454096 TGCAAAGAGATAAATATTCATGAAAACTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34964108 31 - 40319822 TGCAAAGAGATAAATATTCATGAAAACTAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515804 31 - 9219162 TGCAAAGAGATAAATATTCATGAAAACTAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042481 31 + 135778131 TGCAAAGAGATAAATATTCATGAAAACTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818622 31 - 3013352 TGCAAAGAGATAAATATTCATGAAAACTAAA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041425 31 + 8656713 TGCAAAGAGATAAATATTCATGAAAACTAAA i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14959828 31 + 15034901 TATGGAGAGATAAATATTCATAAAAACTAAA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26348825 31 - 93316391 TGTGGACAGAAAAATGTTAATGAAAACTAAA i micMur3.chr14 C 0 C 0 s canFam3.chr19 44079879 31 - 53741614 TGCTGAGAGAGAAATGTCAATGAAAACTAAA i canFam3.chr19 I 14 C 0 s dasNov3.JH569232 1816584 29 + 5974691 -AACAAAGGAGAGATGTT-ATGAAAACTGAG i dasNov3.JH569232 C 0 I 250 e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=171818.000000 s hg38.chr9_KI270719v1_random 85001 23 + 176845 TTTATAACATTAAACTATTGCTC s panTro5.chr4 135108586 23 + 194502333 TTCATAACATTCAACTATTGCTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59406 23 + 95358 TTTATAACATTCAACTATTGCTC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90493985 23 - 115148730 TTTATAACATTCAACTATTGCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131453047 23 + 190429646 TTTATAACATTCAACTATTACTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130972058 23 + 189454096 TTTATAACATTCAACTATTACTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34964139 23 - 40319822 TTTATAACATTCAACTATTGCTC i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515835 23 - 9219162 TTTATAACATTCAACTATTGCTC i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042512 23 + 135778131 TTTATAACATTCAACTATTGCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818653 23 - 3013352 TTTATAACATTCAACTATTGCTC i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041456 23 + 8656713 TTTATAACATTCAACTATTGCTC i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14959859 23 + 15034901 TTTGTAACACTCAACTGTTGCTC i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26348856 23 - 93316391 TTTATACTACTTCACTATTGCTC i micMur3.chr14 C 0 C 0 s canFam3.chr19 44079910 23 - 53741614 TTCATAACATTCAACTATTGCTC i canFam3.chr19 C 0 C 0 e dasNov3.JH569232 1816613 250 + 5974691 I e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=839453.000000 s hg38.chr9_KI270719v1_random 85024 124 + 176845 AATTCTTAGAAATTTAATCACTACTTATATTTTAAAGCAAAATATTTTTGAACTTATTTAGAAAAATATGACTTCATCTCTCATATGTCCATTCAAAGTTTTAAAC---------------------------------------AAAGTA------TAAAAGGAAATT s panTro5.chr4 135108609 124 + 194502333 AATTCTTAGAAATTTAATCACTACTTATATTTTAAAGCAAAATATTTTTGAACTTATTTAGAAAAATATGACTTCATCTCTTATATGTCCATTCAAAGTTTTAAAC---------------------------------------AAAGTA------TAAAAGGAAATT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59429 123 + 95358 AATTCTTAGAAATTTAATCACTACTTATATTTTAAAGCAAAATATTTTTGAACTTATTTAG-AAAATATGACTTCATCTCTCATATGTCCATTCAAAGTTTTAAAC---------------------------------------AAAGTA------TAAAAGGAAATT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90494008 124 - 115148730 AATTGTTAGAAATTTAATCACTACTTACATTTTAAAGCAAAATATTTTTGAACTTATTTAGAAAAATATGACTTCATCTCTCATATGTCCATTCAAAGTTTTAAAA---------------------------------------AAAGTA------TAAAAGGAAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131453070 122 + 190429646 AATTGTTATAAATTTAATCACTACTTATATTTTAAAGCAAAGTATTTTTGAATTTATTTAGAAAA--ATGACTTCATCTCTCATATGTCCCTTCAAAGTTTTAAAC---------------------------------------AAGGTA------TAAAAGGAAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130972081 122 + 189454096 AATTGTTATAAATTTAATCACTACTTATATTTTAAAGCAAAGTATTTTTGAATTTATTTAGAAAA--ATGACTTCATCTCTCATATGTCCATTCAAAGTTTTAAAC---------------------------------------AAGGTA------TAAAAGGAAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34964162 122 - 40319822 AATTGTTATAAATTTAATCACTACTTATATTTTAAAGCAAAGTATTTTTGAATTTATTTAGAAAA--ATGTCTTCATCTCTCATATGTCCATTCAAAGTTTTAAAC---------------------------------------AAGGTA------TAAAAGGAAATT i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515858 122 - 9219162 AATTGTTAGAAATTTAATCACTACTTATATTTTAAAGCAAAGTATTTTTGAATTTATTTAGAAAA--ATGACTTCATCTCTCATATGTCCATTCAAAGTTTTAAAC---------------------------------------AAGGTA------TAAAAGGAAATT i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042535 122 + 135778131 AATTGTTAGAAGTTTAATCACTACTTATATTTTAAAGCAAAGTATTTTTGAATTTATTTAGAAAA--ATGACTTCATCTCTCATATGTCCATTCAAAGTTTTAAAC---------------------------------------AAGGTA------TAAAAGGAAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818676 122 - 3013352 AATTGTTAGAAATTTAATCACTACTTATATTTTAAAGCAAAGTATTTTTGAATTTATTTAGAAAA--ATGACTTCATCTGTCATATGTCCATTCAAAGTTTTAAAC---------------------------------------AAGGTA------TAAAAGGAAATT i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041479 122 + 8656713 AATTGTTAGAAATTTAATCACTACTTATATTTTAAAGCAAAGTATTTTTGAATTTATTTAGAAAA--ATGACTTCATCTCTCATACGTCTATTCAAAGTTTTAAAC---------------------------------------AAGGTA------TAAAAGGAAATT i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14959882 124 + 15034901 AATTGTTAGAAATATAATCACTGCTTATATTTTAAAGCAAAATACTTTTGAATTTATTTTGAAAAATGTGACTTCATGTCTCATATGTCCATTCAAGGTTTTAAAC---------------------------------------AAAGTA------TAAAACAAAATT i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26348879 124 - 93316391 AATTATTAGAAATTTAATTACCATTTATAATTTAAAGCAACATATTTTTACATTTAGTTTGAAGTACATCATGTCATCTCCCACATAGCCATTCAAGGTTTTAAAC---------------------------------------AAACTA------TAAAAGAAAATC i micMur3.chr14 C 0 C 0 s canFam3.chr19 44079933 117 - 53741614 AGGTATTAGAAGTTAGATCACTACTTACATTTTAAAACAACATATGTTTACATTTAGTTTAAAAA-TATGAAACC------TATACAGCTATGTAAAGCTATACAT---------------------------------------GAAGTA------CAAAAGGAAATT i canFam3.chr19 C 0 I 195 s dasNov3.JH569232 1816863 160 + 5974691 aactattaaaaatttgatta-tacttatattttaaaG-AAGCCATTTTAG------TTTGAAAAAAATTGACATCATCTCCCATATATTTAT-CAAGATTGTAAACTGCTTATGTACCCCTCCTTCTTGACACTCAACTTGAATGAAAATAACAAATTATAAAGAAATT i dasNov3.JH569232 I 250 C 0 e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=624496.000000 s hg38.chr9_KI270719v1_random 85148 80 + 176845 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCATTCAAGAGGTTTCAACAAATTTCTGGAGGAATGAA--AGGTAATTGAAG s panTro5.chr4 135108733 80 + 194502333 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCATTCAAGGGGTTTCAACAAATTTCTGGAGGAATGAA--AGGTAATTGAAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59552 80 + 95358 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCATTCAAGAGGTTTCAACAAATTTCTGGAGGAATGAA--AGGTAATTGAAG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90494132 80 - 115148730 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCATTCAAGAGGTTTCACCAAATTTCTGGAGGAATGAA--AGGTAATTGAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131453192 80 + 190429646 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCGTTCAAGAGGTTTCAACAAATTTCTGGAGGAATGAA--AGGTAATTGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130972203 80 + 189454096 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCGTTCAAGAGGTTTCAACAAATTTCTGGAGGAATGAA--AGGTAATTGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34964284 80 - 40319822 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCGTTCAAGAGGTTTCAACAAATTTCTGGAGGAATGAA--AGGTAATTGAAG i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4515980 80 - 9219162 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCGTTCAAGAGGTTTCAACAAATTTCTGGAGGAATGAA--AGGTAATTGAAG i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042657 80 + 135778131 --AAAC-----AGTGGAGGAAATGAGAAAGGTCACAGGCGTTCAAGAGGTTTCAACAAATTTCTGGAGAAATGAA--AGGTAATTGAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818798 80 - 3013352 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCGTTCAAGAGGTTTCAACAAATTTCTGGAGGAATGAA--AGGTAATTGAAG i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041601 80 + 8656713 --AAAC-----AGTGGAGGAAATGAGAAAGGTCATAGGCGTTCAAGAAGTTTCAACAAATTTCTGGAGGAATGAA--AGGTAATTGAAG i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14960006 80 + 15034901 --TAAC-----AGTGGAGGAAATGAGAAAGTTCATAAGCATTCAATAGGTTTCAACAAACTTCTGGAGGAATGAA--ATGTAATTGAAG i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26349003 85 - 93316391 --AAATATAAAAGTGGAGAAAATGAGAAAGGTCATAAGCATTTAAAAGGTTTATACCAATTTCTGGAAGAATAAA--AGGTAATTGGAG i micMur3.chr14 C 0 C 0 s canFam3.chr19 44080245 77 - 53741614 --aAAC-----A---TAGGAAATGAAAGAGGACTTAAGCACTCATGAGGTTTCAGCAAGTTTCTGGAAAGAGGAA--AAGAGAATAAAG i canFam3.chr19 I 195 N 0 s dasNov3.JH569232 1817023 84 + 5974691 AATAAC-----AGTGAGGTAAATGAAAATTATATTAAGCATTTAAGAGGTTTTAATAAATTTCTGGAGGGGAAAATGAGAAAACTGAAT i dasNov3.JH569232 C 0 C 0 e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=17381.000000 s hg38.chr9_KI270719v1_random 85228 2 + 176845 GA s panTro5.chr4 135108813 2 + 194502333 GA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59632 2 + 95358 GA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90494212 2 - 115148730 GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131453272 2 + 190429646 GA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130972283 2 + 189454096 GA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34964364 2 - 40319822 GA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4516060 2 - 9219162 GA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042737 2 + 135778131 GA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818878 2 - 3013352 GA i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041681 2 + 8656713 GA i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14960086 2 + 15034901 GA i aotNan1.NW_018507635v1 C 0 C 0 s micMur3.chr14 26349088 2 - 93316391 GA i micMur3.chr14 C 0 N 0 s dasNov3.JH569232 1817107 2 + 5974691 GA i dasNov3.JH569232 C 0 C 0 e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=7098.000000 s hg38.chr9_KI270719v1_random 85230 1 + 176845 T s panTro5.chr4 135108815 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59634 1 + 95358 T i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90494214 1 - 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131453274 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130972285 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34964366 1 - 40319822 T i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4516062 1 - 9219162 T i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042739 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818880 1 - 3013352 T i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041683 1 + 8656713 T i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14960088 1 + 15034901 T i aotNan1.NW_018507635v1 C 0 C 0 s dasNov3.JH569232 1817109 1 + 5974691 T i dasNov3.JH569232 C 0 N 0 e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=4116951.000000 s hg38.chr9_KI270719v1_random 85231 758 + 176845 GTGTTAAaataatttctattattatctttatagatttagtgtccagtaaacattttataaacaatccaacttgctgttttgtgttcttgaactttatttaaactgaattata--ttgtacatatccttttgtgacttaatcataccactgcatattacgtttgtgagagtaagccacattaacatatctaaataaagttatctatg--tttttctaaagtgtagtattccactgtatgaatctaccacattctactgttgtttaacttttacattgcttat--------------agtacttaactgagcctgtaaatattttggatcacatttcttaatggccaaccacgtacatacaaaataaggagtgaaagccaattgctgattagaatatatggtcatcttcaatattactgggtaatacaagcctctttttaaaacggatataatttccatttccaggaaagcatatgaaattattattgctctatatgtttgccagaagtctttcttgtcagac-tgtttttggtcaatctgttgtataagtaataatgtacatataaaacattttcatttgcatttttgtgttaaaaataagttaaagtgattctaaatatgtatggtggacacttatattttacattttataaagcacatgtgcaagcca-tttt-ctttgttttactgtcgggttttctgtaatttttacctggg-tttacatttaaatattga-tcaccaaggaattgattgttacatattatataaggtaaagaatctc s panTro5.chr4 135108816 757 + 194502333 GTGTTAAaataatttctattattacctttatagatttagtgtccagtaaaccttttataaacaatccaacttgctgttgtgtgttcttgaacttcatttaaactgaattata--ttgtacatatccttttgtgacttaatcataccactgcatattacgtttgtgagagtaagccacattaacatacctaaataaagttatctatt--tttttctaaagtgtagtattccactgtgttaatctaccacattctactgttgtttaacttttgcattgtttat--------------agtacttaactgagcctgtaaatattttggatcacatttcttaatggccaaccacgtacatacaaaataaggagtgaaagtcaattgttgattagaatatatggtcatcttcaatattactgagtaatacaagcctctttttaaaatggatataatttccatttccaggaaagcatatgaaattattgttgctctatatctttgccagaagtctttcttctcagac-tttttttggtcaatctgttgtataagtaataatgtacatataaaacattttcatttgcatttttgtgttaaaaataagttaaagtgattctaaa-atgtatggtggacacttatattacacattttataaagcacatgtacaagcca-tttt-gtttgtttaactgtcgggttttctgtagtttttgcctggc-tttacatttaaatattga-tcgccaaggaactgactgttacatgttatataaggtaaagaatcac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 59635 752 + 95358 GTGTTAAaataatttctattattatctttatagatttagtgtccagtaaaccttttataaacaatccaacttgctgttttgtgttcttgaac----tttaaactgaattata--ttgtacatatccttttgtgacttaatcataccactgcatattacgtttgtga-agtaagccacattaacatatctaaat-aagttatctatt--tttttctaaagtgtagtattccactgtatgaatctaccacattctactgttgtttaacttttgcattgcttat--------------agtacttaactgagcctgtaaatattttggatcacatttcttaatggccaaccacgtacatacaaaataaggagtgaaagccaattgctgattagaatatatggtcatcttcaatattactggataatacaagcctctttttaaaacggatataatttccatttccaggaaagcatatgaaattattattgctctatatctttgccagaagtctttcttgtcagac-tttttttggtcaatctgttgtataagtaataatgtacatataaaacattttcatttgcatttttgtgttaaaaataagttaaagtgattctaaatatgtatggtggacacttacattgtacattttataaagcacatgtacaagcca-tttt-ctttgttttactgttgggttttctgtaatttttgcctggc-tttacatttaaatattga-tcgccaaggaattgattgttacatattatataaggtaaagaatcac i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90494215 757 - 115148730 GTGTTAAAATAATTTATATTATTATCTTTATAGATTGAGTGTCCAGTAAACCTTTTAtaaacaatccaacttgctgttttgtgttcttgaactttatttaaactgaattgta--ttgtacatatccttttgtgacttaatcataccactgcatattacgtttgtgagagtaagccacattaacatacctaaataaagttctctatt--tttttctaaagtgtagtattccactgtatgagtctactacattctactgttgtttaacttttacattgtttat--------------agtacttaactgagcctgtaaatattttggatcacatttcttaatggccaaccacgtacatacaaaacaaggagtgaaagtcaattcttgatcagaatatatggtcatcttcaatattattgggtaatacaagcctctttttaaaatggatataatttccatttccaggaaagcatatgaaattattgttgctctatatctttgccaaaagtttttcttgtccgac-tttttttggtcaatctgttgtatatgtaataatgtacttatagaacattttcatttgcatttttgtgttaaaaataagttaaagggattctaaatatgtatggtggacacttagattgtacattttataaagcacatgtacaagcca-tttt-ctttgttttactgtcgggttttctgtaatttttgcct-gc-tttacatttaaatattgattctccaaggaattgattgttacatattatataa-gtaaagaatcac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131453275 761 + 190429646 GTGTTAAaataatttctgttattatctttatagatttagtgtccagtaaaccttttattaacaatccaacttgctgttttgtgttcttgaactttatttaaactgaattata--ttgtacatatccttttgtgctttaatcataccactacatattacatttgtgagagtaagccacattaacacgtctaaataaagttctctatttctttttctaaagtgtagtattccactgtatgaatctaccacattctactgttgttgaacttttgcattgtttat--------------agtacttaactgagcctgcaaatatttgggatcacatttcttaacggccaaccatgtacatacaaacctaggagtgaaaatcaattcttgatcagaatatatggtcatcttcaatattactgggtaatacaagcctctttttaaaatggatataatttccatttccaggaaaacatatgaaattattgttgctctatatctttaccaaaagcttttcttgtcagac-tttttttggtcaatctgttgtatatgtaataatgtatatatagaatattttcatttgcatttttgtgttaaaaataagttaaaggaattctaaatgtgtatggtggacatttagattgtgtattttataaagcacatgtgcaagcca-tttt-ctttgtttttctgtcgggttttctgtaattttTGCCCGGC-tttacatttaaatattaattctccaaggaattgattgttacgtattatataaggtaaagcatcac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130972286 761 + 189454096 GTGTTAAAATAATTTATGTTATTAtctttatagatttagtgtccagtaaaccttttattaacaatccaacttgctgttttgtgttcttgaactttatttaaactgaattata--ttgtacgtatccttttgtgctttaatcataccactacatattacatttgtgagagtaagccacattaacacgtctaaataaagttctccatttctttttctaaagtatagtattccactgtatgaatctaccacattctactgttgttgaacttttgcattgtttat--------------agtacttaactgagcctgcaaatatttgggatcacatttcttaacggccaaccatgtacatacaaacttaggagtgaaagtcaattcttgatcagaatatatggtcatcttcaatattactgggtaatacaagcctctttttaaaatggatataatttccatttccaggaaaacatatgaaattattgttgctctatatctttaccaaaagcttttcttgtcagac-tttttttggtcaatctgttgtatatgtaataatgtatatatagaatattttcatttgcatttttgtgttaaaaataagttaaaggaattctaaatgtgtatggtggacatttagattgtgtattttataaagcacatgtgcaagcca-tttt-ctttgtttttctgtcgggttttctgtaattttTGCCCGGC-tttacatttaaatattaattctccaaggaattgattgttacgtattatataaggtaaagcatcac i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34964367 761 - 40319822 GTGTTAAaataatttctgttattatctttatagatttagtgtccagtaaaccttttattaacaatccaacttgctgttttgtgttcttgaactttatttaaactgaattata--ttgtacatatccttttgtgctttaatcataccactacatattacatttgtgagagtaagccacattaacacgtctaaataaagttctctatttctttttctaaagtgtagtattccactgtatgaatctaccacattctactgttgttgaacttttgcattgtttat--------------agtacttaactgagcctgcaaatatttgggatcacatttcttaacggccaaccatgtacatacaaacctaggagtgaaagtcaattcttgatcagaatatatggtcatcttcaatattactgggtaatacaagcctctttttaaaatggatataatttccatttccaggaaaacatatgaaattattgttgctctatatctttaccaaaagcttttcttgtcagac-tttttttggtcaatctgttgtatatgtaataatgtatatatagaatattttcatttgcatttttgtgttaaaaataagttaaaggaattctaaatgtgtatggtggacatttagattgtgtattttataaagcacatgtgcaagcca-tttt-ctttgtttttctgtcgggttttctgtaattttTGCCCGGC-tttacatttaaatattaattctccaaggaattgattgttacgtattatataaggtaaagcatcac i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4516063 761 - 9219162 GTGTTAAaataatttctgttattatctttatagatttaatgtctagtaaaccttttattaacaatccaacttgctgttttgtgttcttgaactttatttaaactgaattata--ttgtacatatccttttgtgctttaatcataccactacatattacatttgtgagagtaagccacattaacacgtctaaataaagttttctatttctttttctaaagtgtagtattccactgtatgaatctaccacattctactgttgttgaacttttgcattgtttat--------------agtacttaactgagcctgcaaatatttgggatcacatttcttaacggccaaccatgtacatacaaacctaggagtgaaagtcaattcttgatcagaatatatggtcatcttcaatattactgggtagtacaagcctctttttaaaatggatataattttcatttccaggaaaacatatgaaattattgttgctctatatctttaccaaaagcttttcttgtcagac-tttttttggtcaatctgttgtatatgtaataatgtatatatagaatattttcatttgcatttttctgttaaaaataagttaaaggaattctaaatgtgtatggtggacatttagattgtgtattttataaagcacatgtgcaagcca-tttt-ctttgcttttctgtcgggttttctgtaattttTGCCCGGC-tttacatttaaatattaattctccaaggaattgattgttacgtattatataaggtaaagcatcac i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79042740 761 + 135778131 GTATTAAaataatttctgttattatctttatagatttagtgtccagtaaaccttttattaacaatccaacttgctgttttgtgttcttgaactttatttaaactgaattata--ttgaacatatccttttgtgccttaatcataccactgtatatgacatttgtgagagtaagccacattaacacgtctaaataaagttctctatttctttttctaaagtgtagtattccactgtatgaatctaccacattctactgttgttgaacttttgcattgtttat--------------agtacttaactgagcctgcaaatatttgggatcacatttcttaacggccaaccatgtacatacaaagctaggagtgaaagtcaattcttgatcagaatatatggtcatcttcaatattactgggtaatacaagcctctttttaaaatggatataattttcatttccaggaaaacatatgaaattattgttgctctatatctttaccaaaagcttttcttgtcagac-tttttttggtcaatctgttgtatatgtaataatgtacatacagaacattttcatttgcatttttgtgttaaaaataagttaaaggaattctaaatatgtatggtggacacgtagattgtatattttataaagcacatgtgcaagcca-tttt-ctttgtttttctgtcgggttttctgtaatttttgcctggt-tttacatttaaatattgattctccaaggaattgattgttatgtattatataaggtaaagcatcac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2818881 761 - 3013352 GTGTTAAaataatttctgttattatctttatagatttagtgtccagtaaaccttttattaacaatccaacttgctgttttgtgttcttgaactttatttaaactgaattata--ttgtacatatccttttgtgctttaatcataccactacatattacatttgtgagagtaagccacattaacacgtctaaataaagttctctatttctttttctaaagtgtagtattccactgtatgaatctaccacattctactgttgttgaacttttgcattgtttat--------------agtacttaactgagcctgcaaatatttgggatcacatttcttaacggccaaccatgtacatacaaacctaggagtgaaagtcaattcttgatcagaatatatggtcatcttcaatattactgggtaatacaagcctctttttaaaatggatataatttccatttccaggaaaacatatgaaattattgttgctctatatctttaccaaaagcttttcttgtcagac-tttttttggtcaatctgttgtatatgtaataatgtatatatagaatattttcatttgcatttttctgttaaaaataagttaaaggaattctaaatgtgtatggtggacatttagattgtgtattttataaagcacatgtgcaagcca-tttt-ctttgcttttctgtcgggttttctgtaattttTGCCCGGC-tttacatttaaatattaattctccaaggaattgattgttacgtattatataaggtaaagcatcac i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6041684 762 + 8656713 ATGTTAAaataatttctgttattatctttatagatttagtgtccagtaaaccttttattaacaatccaacttgctgttttgtgttcttcaactttatttaaactgaattata--ttgtacatatccttttgtgccttaatcataccactgcatattacatttgtgagagtaagccacattaacatgtctaaataaagttctctatttctttttctaaagtgtagtattccactgtatgaatctaccacattctactgttgttgaacttttgcattgtttat--------------agtacttaactgagcctgcaaatatttgggatcacatttcttaatggccaaccatgtacatacaaacctaggagtgaaagtcaattcttgatcagaatatatggccatcttcaatattactgggtaatacaagcctctttttaaaatggatataatttccatttccaggaaaacatatgaaattattattgccctatacgtttaccaaaagcttttcttatcagac-ttttttttgtcaatctgttgtatatgtaataatgtacatatagaatattttcatttgcatttttgtgttaaaaataagttaaaggaattctaaatatgtatggtggacacttagattatatattttataaagcacatgtgcaagccattttt-ttttgtttttctgtcgggttTTCTCTAATTTTTGCCTGGC-TTTGCATTTAAATATTGATTCTCCAAAgaattgattgttaagtattatataaggtaaagcatcac i colAng1.NW_012114544v1 C 0 C 0 s aotNan1.NW_018507635v1 14960089 768 + 15034901 GCGTTAAAATAGTTTCTATTATTAtctttatagatttagtgtccagtaaatcttttataaacagtctaacttgttgttttgtgttcttaaac----tttaaactgaattatattttatatatatccttttgtgacttaatcataccattacatattatgtttatgagagtaagccacattgacatacctaaataaagttctcta----tttttttaaagtgtaatattccactgtatgaatctataacattcta---ttgtttattttttgcattacgtataaaaaacttaaatgaatacttaactaagactgtaaatattttagatcatgtttcttaatgaccaaccatgtacatacaaacctaggagtgaaagtcaattcttgattagaatatatggccatcttcaatattactgggtaatacagtctctttttaaaaatggatataatttacatttccagaaaagcatatgaaattattgttgctctatatatttgccaaaagtttttc-tgtcagacttttttttggtaaacctgttatacatgtaataatgtacatatagaatattttcatttgcatttttgtattacaactaagttaaagtaattctaaatatgtatagtggacacttaaattgtacattttataaaccacatgtacaagcaa-ttttcctttgtttttctgttgggttttccatattttttgcctggcttttacatttaaatattgattctccaaggaattgattgttccatattatatatggtaaagaatcaa i aotNan1.NW_018507635v1 C 0 C 0 e saiBol1.JH378129 6541612 0 - 25294431 C e calJac3.chr3 129476740 0 - 190850796 C a score=6856786.000000 s hg38.chr9_KI270719v1_random 85989 976 + 176845 tttaattattttccata--------tgtatagccagttttctcactctcatttattggcaaatttattttt-caccactgatctataatactagctttcttacatatcatgggttctt----atattttccttactgtagtctacctattccatttcattgattatttattactttgttaataccacattgcattaatt----aagtcttataatatttcctgtaa-tatattcttccttcctcaataaattattaactgaattttaatatttttagagtttacataaattctagaattagcttgtcaatatctaaatcaaaccttactgggttttactttggatgcactagttacaaagattaattttggggagaagtgatttcattaaagtctttcaattcaagaatatatttatgtcaatgttatgtctatgtttatttgaactttatttaaactgagttatactgtacatattcttttgtgacttaatcataccactaaatattatgtttgtgagagtaagccacattgacacatctaaataaagttctctacttatatgaaatgcatttcaatattgcataatacgtttgtgtcaaagcatcttgctaaaagctcatattcattagtataatgtatcttacaatcattttgaattgtctgtgtacttagtgtcatcggtaacatagtaatctgttttctctttcataattctta-tttttttaatatttacaatcctatcccagtgtctaagacctgcaaaaggataaataaaattgcttgtaccatctatgtttattttgttcccaatcacaaaggaaatattttaacattccattgttaagtgttataatttcaatagaacttttgaaaacaaatgttattagttaaactagattct----cttttaatttt-gggttgttaa--aatgtatg--actttttaagaaaataaaattaaatatgcttataatattgttaagttatttgttgtggtgta s panTro5.chr4 135109573 980 + 194502333 tttaattacttttcata--------tgtataaccagttttctcactctcatttattggcaaatttattttt-caccactgatctataatactagctttcttacatatcacaggttcttataaatattttccttactgtagtctacctattccatttcattgattatttattactttgttaataccacattgcattaatt----aagtcttataatatttcctgtaa-tatattctttcttcctcaataaattattaactgaattttaatatttttagagtttacataaattctggaattagcttgtcaatatctaaatcaaaccttactgggttttactttggatgcactagttacaaagattaattttggggagaagtgatttcattaaagtctttcgattcaagaatatATTTATGTCAATGTTATGTCTatgtttatttgaactttatttaaactgagttatactgtacatattcttttgtgacttaagcgtaccactaaatattatgtttgtgagagtaagccacattgacacatctaaataaggttctctacttatttgaaatgcatttcaatattgcataatacatttgtgtcaaagcatcttgctaaaagctcatattcattagtataatgtatcttacaatcattttgaattttctgtgtacttagtgtcatcggtaacatagtaatctgttttctctttcataattctta-ttattttaatatttacaatcctatcccagtgtctaagacctgcaaaaggataaataaaattgcttgtaccatctatgtttattttgttcccaatcacaaaggaaatattttaacattccattgttaagtgttataatttcaatagaacttttgaaaacaaatgttatcagttaaactagattct----cttttaatttg-gggttgttaa--aatgtatg--actttttaagaaaataaaattaaatatgcttataatattgttaagttatttgttgtggtgta i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 60387 972 + 95358 tttaattattttccata--------tgtatagccagttttctcactctcatttattggcaaatttattttt-caccactgatctataatactagctttcttacatatcatgggttctt----atattttccttactgcagtctacctattccatttcattgattatttattactttgttaataccacattgc----att----aagtcttataatatttcctgtaa-tatattcttccttcctcaataaattattaactgaattttaatatttttagagtttacataaattctagaattagcttgtcaatatctaaatcaaaccttactgggttttactttggatgcactagttacaaagattcattttggggagaagtgatttcattaaagtctttcaattcaagaatatatttatgtcaatgttatgtctatgtttatttgaactttatttaaactgagttatactgtacatattcttttgtgacttaatcatgccactaaatattatgtttgtgagagtaagccacattgacacatctaaataaagttctctacttatatgaaatgcatttcaatattgcataatacgtttgtgtcaaagcatcttgctaaaagctcatattcattagtataatgtatcttacaatcattttgaattttctgtgtacttagtgtcatcggtaacatagtaatctgttttctctttcataattctta-tttttttaatatttacaatcctatcccagtgtctaagacctgcaaaaggataaataaaattgcttgtaccatctatgtttattttgttcccaatcacaaaggaaatattttaacattccattgttaagtgttataatttcaatagaacttttgaaaacaaatgttatcagttaaactagattgt----cttttaatttc-gggttgttaa--aatgaatg--actttttaagaaaataaaattaaatatgcttataatattgttaagttatttgttgtggtgta i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90494972 967 - 115148730 ttt-attattttccata--------tgtataaccagtcttctcactctcatttattggcaaatctattttt-caccactgatctgtaatactagctttctgacatatcataggttcttataaatattttccttactgtagtctgcctattccatttcattgattatttattactttgttaataccacactgcattaattaacaaagtctt---atatttcctgtaa-tttattctttcttcctcaataaattattaactgaattttaatatttttagagtttacatatattatagaattagcttatcaatatctaaatcaaaccttactgggttttactttggatgtgctaattacaaagattaattttggggagaagtgatttcattaaagtctttcaattcaagaatatatttatgccaatgttatgtctatgtttatttgaactttatttaaactgagttatactgtacatattcttttgtgacttaatcgtaccactaaatattatgtttgtgagagtaagccacattgacacatctaaataaagttctctacttatttgaaatgcatttcaatattgcataataggtttgtgtcaaagcatcttgctaaaagctcatattcattagtgtaatgtatcttacaatcattttgaattttct---------gtgtcatctgtaacatagcaatctgttttctctttcataatccttattttttttaatatttacaatcctgccccagtgtctaagacctgcaaaaggataaataaaattgcttgtaccatctatatttattttgttcccaatcacaaaggaaatattttaacactccattgttaagtgttataatttcaatagaacttttgaaaacaagtgttatcagttaaactaggctct----ctttcaatttc-aggttgttaa--aaTGTATG--ACTTTTTAAGAAAATAAAATTAAATATGCTTATAATATT-----GTTATTTGTtgtcgtgta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131454036 979 + 190429646 tttaattattttccatatataaaactgtataaccagttttctcactctaatttattggcaaatctatttttccaccattgatctataatactagttttcttacatatcatcggttcttataaat-ttttccttactgtagtctacctattccgtttcattgatcatttattactttgctaataccatattgcattaatt----aagtcttatgatattccctgtaa-tttattatttcttcctcaataaattattaactgaactttaatatttttagagtttatgtatattctagaattagcttgtcaatatctaaatcaactcttactgggttttactttggatgcattaatgacaaaggttaattttggggagaagtgatttcattaaggcctttcaattcaagaTTATATTTATGTCAATGTTATGTCTATATTTAtttgaactttatttaaactgagttatactgtgcatattattttgtgacttaatcataccactacatattatgtttgtgagagtgagtcacattgaaacatctaaataaagttcTCTAATTATTTGAAATGCATTTC----------AATAGGtttgtgtcaaagcatcttgctaaattctcatattcattagtataatgtatcttacaatcattttgaattttatgtgtacttaatatcacctgtcatatagcaatttgttttatctttcataattcttaatgtttttaatatttacaatcctaccctagtgtctaagacctgcaaaaggataaataaaattgcttgcaccatctatgtttattttgttcccaatcacaaaggaaatattttaacattccattgttaactgttataatttcaatagaatttttgaaaccatatgttatcagttaaactaggttct----cttttaatttc-tggttgttaa--aaTGTATG--ATTTTTTTAGGAAATAAAATTAAATATGCTTATGATATTGTTAAGCTATTTGTTGTGGtata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130973047 979 + 189454096 tttaattattttccatatataaaactgtataaccagttttctcactctaatttattggcaaatctatttttccaccattgatctataatactagtttttttacatatcatcagttcttataaat-ttttccttactgtaatctacctattccatttcattgatcatttattactttgctaataccatattgcattaatt----aagtcttatgatattccctgtaa-tttattatttcttcctcaataaattattaactgaactttaatatttttagagtttacgtatattctagaattagcttgtcaatatctaaatcaactcttactgggttttactttggatgcattaatgacaaaggttaattttggggagaagtgatttcattaaggcctttcaattcaagaTTATATTTATGTCAATGTTATGTCTATATTTAtttgaactttatttaaactgagttatactgtgcatattattttgtgacttaatcataccactacatattatgtttgtgagagtgagtcacattgaaacatctaaataaagttctctaattatttgaaatgcATTTC----------AATAGGtttgtgtcaaagcatcttgctaaattctcatattcattagtataatgtatcttacaatcattttgaattttatgtgtacttaatatcacctgtcatatagcaatttgttttatctttcataattcttaatgtttttaatatttacaatcctaccctagtgtctaagacctgcaaaaggataaataaaattgcttgcaccatctatgtttattttgttcccaatcacaaaggaaatattttaacattccattgttaactgttataatttcaatagaatttttgaaaccatatgttatcagttaaactaggttct----cttttaatttc-tggttgttaa--aaTGTATG--ATTTTTTTAGGAAATAAAATTAAATATGCTTATGATATTGTTAAGCTATTTGTTGTGatata i macFas5.chr5 C 0 I 335 s macNem1.NW_012010911v1 34965128 988 - 40319822 tttaattattttccatatataaaactgtataaccagttttctcactctaatttattggcaaatctatttttccaccattgatctataatactagttttcttacatatcatcggttcttataaat-ttttccttactgtagtctacctattccatttcattgattatttattactttgctaataccatattgcattaatt----aagtcttatgatattccctgtaa-tttattatttcttcctcaataaattattaactgaactttaatatttttagagtttacgtatattctagaattagcttgtcaatatctaaatcaactcttactgggttttactttggatgcattaatgacaaaggttaattttcgggagaagtgatttcattaaggcctttcaattcaagattatatttatgtcaatgttatgtctatatttatttgaactttatttaaactgagttatactgtgcatattattttgtgacttaatcataccactacatattatgtttgtgagagtgagtcacattgaaacatctaaataaagttctctaattatttgaaatgcatttc----------aataggtttgtgtcaaagcatcttgctaaattctcatattcattagtataatgtatcttacaatcattttgaattttatgtgtacttaatatcacctgtcatatagcaatttgttttatctttcataattcttaatgttttaaatatttacaatcctaccctagtgtctaagacctgcaaaaggataaataaaattgcttgcaccatctatgtttattttgttcccaatcacaaaggaaatattttaacattccattgttaactgttataatttcaatagaatttttgaaaccatatgttatcagttaaactaggttctttgctttttaatttcttggttgttaaagaatgtatgatatttttttaggaaataaaattaaatatgcttatgatattgttaagctatttgttgtggtata i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4516824 979 - 9219162 tttaattattttccatatataaaactgtataaccagttttctcactctaatttattggcaaatctatttttccaccattgatctataatactagttttcttacatatcatcggttcttataaat-ttttccttactgtagtctacttattccatttcattgattatttattactttgctaataccatattgcattaatt----aagtcttatgatattccctgtaa-tttattctttcttcctcaataaattattaactgaactttaatatttttagagtttacatatattctagaattagcttgtcaatatctaaatcagctcttactgggttttactttggatgcattaatgacaaaggttaattttggggagaagtgatttcattaaggcctttcaattcaagaatatatttatgtcaatgttatgtctatatttatttgaactttatttaaactgagttatactgtgcatattattttgtgacttaatcataccactacatattatgtttgtgagagtgagtcacattgagacatctaaataaagttcTCTAACTATTTGAAATGAATTTC----------AATAGGtttgtgtcaaagcatcttgctaaattctcatattcattagtataatgtatcttacaatcattttgaattttatgtgtacttaatatcacctgtcatacagcaatttgttttatctttcataattcttaatgttttaaatatttacaatcctaccctagtgtctaagacctgcaaaaggataaataaaattgcttgcaccatctatgtttattttgttcccaatcacaaaggaaatattctaacattccattgttaactgttataatttcaatagaatttttgaaaccatatgttatcagttaaactaggttct----cttttaatttc-tggttgttaa--aatgtatg--atttttttaggaaataaaattaaatatgcttatgatattgttaagctatttgttgtggtata i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79043501 978 + 135778131 tttaattattttccatatataaaactgtataaccagttttctcactctaatttattggcaaatgtattttt-caccattgatctataatactagttttcttacatatcatcggttcttatgaat-ttttccttactgtagtctacctattccatttcattgattatttattactttgctaataccatattgcattaatt----aagtcttatgatattccctgtaa-tttattctttcttcctcaataaattattaactgaactttaatatttttagagtttacatatatcctagaattagcttgtcaatatctaaatcaactcttactgggttttactttggatgcattaatgacaaaggttaattttggggagaagtgatttcattaaggtctttcaattcaagaatatatttatgtcaatgttatgtctatatttatttgaactttatttaaactgagttagactgtgcatattattttgtgacttaatcataccactacatattatgtttgtgagagtgagtcacattgagacatctaaataaagttctctaattatttgaaatgcATTTC----------AATAGGTTTGAGTCAAAGCatcttgctaaattctcatattcattagtataatgtatcttacaatcattttgaattttgtgtgtacttaatatcacctgtcatatagccatttgttttatcttccataattcttaatgtttttaatatttacaatcctaccctagtgtctaagacctgcaaaaggataaataaaattgcttgttccatctatgtttattttgttcccaatcacaaaggaaatattttaacattccattgttaactgttataatttcaatagaattttcgaaaccacatgttatcagttaaactaggttct----cttttaatttc-tggttgttaa--aaTGTATG--ATTTTTTTAGAAAATAAAATTAAATATGCTTATGATATTGTTAAGCTATTTGTtgtggtata i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2819642 975 - 3013352 tttaattattttccatatataaaactatataaccagttttctcactctaatttattggcaaatctatttttccaccattgatctataatactagttttcttacatatcatcggttcttataaat-ttttccttactgtagtctacttattccatttcattgattatttattactttgctaataccatattgc----att----aagtcttatgatattccctgtaa-tttattctttcttcctcaataaattattaactgaactttaatatttttagagtttacatatattctagaattagcttgtcaatatctaaatcaactcttactgggttttactttggatgcattaatgacaaaggttaattttggggagaagtgatttcattaaggcctttcaattcaagaatatATTTATGTCAATGTTATGTCTATGTTTAtttgaactttatttaaactgagttatactgtgcatattattttgtgacttaatcataccactacatattatgtttgtgagagtgagtcacattgagacatctaaataaagttcTCTAATTATTTGAAATGCATTTC----------AATAGGtttgtgtcaaagcatcttgctaaattctcatattcattagtataatgtatcttacaatcattttgaattttatgtgtacttaatatcacctgtcatatagcaatttgttttatctttcataattcttaatgtttttaatatttacaatcctaccctagtgtctaagacctgcaaaaggataaataaaattgcttgcaccatctatgtttattttgttcccaatcacaaaggaaatattttaacattccattgttaactgttataatttcaatagaatttttgaaaccatatgttatcagttaaactaggttct----cttttaatttc-tggttgttaa--aatgtatg--atttttttaggaaataaaattaaatatgcttatgatattgttaagctatttgttgtggtata i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6042446 970 + 8656713 tttaattattttccatatataaaactttataaccagttttctcactctaatttattggcaaagctattttt-cactattgatctataatactagttttcttatatatcataggttcttataaatattttccttactgtagtctaccta-----tttcattgattatttattaccttgctaataccatattgt----att----aagtcttatgatatttcctataa-tttattctatcttccgcaataaattattaactgaactttaatattttttgagtttacatatattctagaattagcttgtcaatatctaaatcaactctttctgggttttactttggatgcactaatgacaaaggttaattttagggagaagtgatttcattaagacctttcaattcaagaatatATTTATGTCAATGTTATGTCTatgtttatttgaactttattcaaactgaatcatactgtgcatattattttgtgacttaatcataccactacatattatgtttgtgagagtgagccacattgagacatctaaataaagttctctaattatttgaaatgcATTTC----------AATAGGTTTATGTCAAAGCatcttgctaaattctcatattcattagtaaaatgtatcttacaatcattttgaattttgtgtgtacttaatatcatctgtaatatagcaatttgatttatctttcataattcttaatgtttttaatatttacaatcctgccctactgtctaagacctgcaaaaggataaataaaattgcttgtaccatctatgtttattttgttcccaatcacaaaggaaatattttaacattcaattgttaactgttataatttcaatagaatttttgaaaccacatgttatcagttaaactaggttct----cttttaatttc-cggttgttaa--aatgtatg--aattttttaggaaataaaattaaatatgcttatgatattgttaagctatttgttgtggtata i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129476740 975 - 190850796 tttaatcattttccata--------tgtataaccagttttctcggtatgatttattagtaaatctattttt-caccattaatctataatattaactttcttacatatcatgtgttctt----atatattcctcactgtagtctacctattccatttcattgatgacttattactttgtcaatatcacatcacattaattagtacaattttacaatatttcttgtagttttattctttcttcctcaataaattattaactgaactttaatatatttaaagtttacatatattctagaattagcctgtcaatatctaaatcaactcttactgggttttactttggatgcattgattacaaagattaatttgggggagaagtgacttctttaaagtccttcaattcaagaatatatttatgtcaatgttatgtcta--tttatttgaagtttatttaaactgagttatactgtgcatattcttttgtgacttaatcatacttctacatattatgtttgtgagagtaagccacattgacacatctaagtaaagttctctatctatttgataagcatttcaatattgcataataggtttatatcaaggcatcttactaaaatctcatattcattagtataacatattttataatcattttgagttttctacatacttaatatcatctgtaataaagcagtttgttttctccttcat-aatttt----tttttaatttttacaatcctaccccagtgtctaagacctgcaagaggacaaataaaattgcttataccatctatgtttattttgtttccaatcacaaaggaaataattcaacattccattgttaagtgtcatgctttaaatagaacttttgaaaaccagtgttatcagttaaactaggttct----cttttaatttc-agattgttaa--aatacatg--actttttaagaaaataacatttaatatgcttataatactattaagttattagttgtggtgtg i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6541612 963 - 25294431 tttaatcattttccata--------tgtataatcagttttctcagtatcatttattagtaaatctattttt-aaccattaatctataatattaagtttcttacatatcatatgttcttagaaatattttcctcattgtagtctacctattccatttcattgattacttactactttggcaatatcacattacattaattagtacagttttacaatatttcttgtaa-tttattctttcttcctcaataaattattaactaaactttaatatttttaaagtttacatatattctaaaattagcttatcaatatctaaatcaactcttactgggttttactttggatgcattgattacaaagattaatttgggggagaaatgacttctttaaagtccttcaattcaagaatatatttatgtcaatgttatgtcta--tttatttgaagtttatttaaactgagttatactttgcatattcttttgtgacttaatcatacttctacatattgtgtttgtcagagtaagccacattaacacatctaaataaagttc----tctatttgaaatgcatttcaatattgcataataggtttgtatcaaagcatcttactaaaatctcatttttattagcataatgtattttataatcattttgaattttctatatacttaatatcatctgtaatatagcagtttgttttctcattcataaatttt----tttaaaatttttacaatcctatcccactgtctaagacctgcaagggaataaataaaattgcttataccatctatgtttattttgttcccaatcacaaaggaaatatttcaacattccattgttaagtgtcattctttaaatagaacttttgaaaacaagtgttatcagttaaactaggttct----cttttaatttc-agattgttaa--aatatatg--actttttaagaaaataacatttaatatgcttttaatacta------------ttgtggtgta i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14960857 973 + 15034901 tttaattattttccata--------tgtataaccagttttctcagtataatttattggcaaatctattttt-aaccattaatctataatattagctttattacatatcatgtgttcttataaatattttcctcactgcagtctacctattccatttcatcgattacttattactctgtcaatatcacattacattaatt-gtacagttttacaatatttcttgtaa-tttattctttcttcctcaataaattattaactgaactttaatatttttaaagttcacatatattctagaattagcttgtcaatatctaaatcaactcttactgggctttactttggatgcattgattgcaaagattaatttgggggagaagtgatttctttaaagtccttcaattcaagaatatatttatgtcaatgttatgtcta--tttatttgaagtgtatttaaactgagttatcctgtgcatattcttttgtgacttaatcatacttctacatatgatgtttgtgagagtaagccatattgacacatctaaataaagttctctacctatttgaaatgcatttcaatattgcataataggtttgtgtcacagcatcttactaaaatctcatattcattagtataatgtattttataatcattttgaattttctatatagttaatatcatctataatatagcagtttgttttctcattcataattttt----tttttaattttcacaatcctaccccagtgtctaagacctgcaagaagataaataaaattgcttataccatttatgtttattttgttcccaatcacaaaggaaatatttcaacattccattgttaagtgtcacgctttaaatagaacttttgaaaacaagtgttatcagttaaactaggttat----cttttaatttc-aggttgttaa--aataaatg--actttttaagaaaataacatttaatatgcttataatacta-----ttatttgttgtggtgta i aotNan1.NW_018507635v1 C 0 C 0 a score=8281.000000 s hg38.chr9_KI270719v1_random 86965 1 + 176845 t s panTro5.chr4 135110553 1 + 194502333 t i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 61359 1 + 95358 t i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90495939 1 - 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131455015 1 + 190429646 t i rheMac8.chr5 C 0 I 338 s macFas5.chr5 130974361 1 + 189454096 T i macFas5.chr5 I 335 C 0 s macNem1.NW_012010911v1 34966116 1 - 40319822 t i macNem1.NW_012010911v1 C 0 I 346 s cerAty1.NW_012000798v1 4517803 1 - 9219162 t i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79044479 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2820617 1 - 3013352 t i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6043416 1 + 8656713 t i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129477715 1 - 190850796 t i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6542575 1 - 25294431 t i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14961830 1 + 15034901 t i aotNan1.NW_018507635v1 C 0 C 0 a score=14750.000000 s hg38.chr9_KI270719v1_random 86966 4 + 176845 cata s panTro5.chr4 135110554 4 + 194502333 cata i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 61360 4 + 95358 cata i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90495940 4 - 115148730 caca i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 130974362 4 + 189454096 TATC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4517804 4 - 9219162 catc i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79044480 4 + 135778131 catc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2820618 4 - 3013352 catc i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6043417 4 + 8656713 catc i colAng1.NW_012114544v1 C 0 C 0 s calJac3.chr3 129477716 4 - 190850796 cata i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6542576 4 - 25294431 cata i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14961831 4 + 15034901 cata i aotNan1.NW_018507635v1 C 0 C 0 e macNem1.NW_012010911v1 34966117 346 - 40319822 I e rheMac8.chr5 131455016 338 + 190429646 I a score=5194990.000000 s hg38.chr9_KI270719v1_random 86970 714 + 176845 ttaattgatacctttacatgaggccattattgcttcccagggtttcttagaataaacattggctgtgatgtcttacattttaatgcattgcttatttctgcgtggaac-ttttttaagttttccttcatta-ttttcataaattacattggtgtttaatttactttccctttactatccttgtcaggttataatatcagagtc-ataatagcataataaaatgaaatagagtatgttctttcctgtttcatgctcagaaagaattgtatgtaagactggaattattgttttgtttcatctttgaaacaacttgccagtaaagtcatcatggcttgaaattatctttatgatatgatttctgactactgattacatgcatttgttgtagcacaattcagatttttcttttcactttaggttacttttggaaaaatgcttgtttcaagtaattgcacacattttacatatatttccaaatttattg-----aaggttttcatactacactaatttaccttcttgatatttgtattatttataACAAAACTCAATAAACTGTGGCAAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatgctcattcattgacatactgtcaa-tttatgccacaacaatagaattgattagttgcaacaaaccatatagcccaaaaacctaaaatatttaccacctgatcctttccaaa----------------- s panTro5.chr4 135110558 719 + 194502333 ttaattgatacctttatatgaggtcattattgcttcccagggtttcttagaataaacattggctgtgatgtcttacattttaatgcattgcttatttctgcatggtag-ttttttaagttttccttcatta-ttttcataaattacattggtgtttaatttactttccctttactatccgggtcaggttataatatcagagtc-ataatagcataataaaatgaaatagagtatgttctttcctgtttcatgctcagaaagaattctatgtaagattggaattattgttttgttccatgtttgatacaacttgccagtaaagtcatcatggcttgaaattatctttatgagatgatttctgactactgattaaatgcatttgttgtagcacaattcagatttttctttccactttaggtcacttttggaaaaatgcatgtttcaagtaattgtacacattttacatatatttccaaatttattgaattaaacgttttcatactacactaatttaccttcttgatatatgtattatttataACAAAACTCAATAAATTGTGGCCAATAAGCCAGAGagtacttataaataaagtattaatgcaacactgtcatgctcattcattgacatattgtcaa-tttatgccacaacaatagaattaattagttacaacaaaccatatagcccaaaaacctaaaatatttaacaactgatcctttccaaa----------------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 61364 718 + 95358 ttaattgatacctttacatgaggccattattgcttcccagggtttcttagaataaacattggctgtgatgtcttacattttaatgcattgcttatttctgcatggaac-ttttttaagttttccttcatta-ttttcataaattacattggtgtttaatttactttccctttactatccttgtcaggttataatatcagagtc-ataatagcataataaaatgaaatagagtatgtt-tttcctgtttcatgctcagaaagaattgtatgtaagattggaattattgttttgtttcatgtttgaaacaacttgccagtaaagtcatcatggcttgaaattatctttatgatatgatttctgactactgattacatgcatttgttgtagcacaattcagatttttcttttcactttaggttacttttggaaaaatgcatgtttcaagtaattgtacacattttacatatatttccaaatttattgaattaaacgttttcatactacactaatttaccttcttgatatttgtattatttataACAAAACTCAATAAACTGTGGCAAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatgctcattcattgacatactgtcag-tttatgccacaacaatagaattgattagttgccacaaaccatatagcccaaaaacctaaaatatttaccatctgatcctttccaaa----------------- i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90495944 721 - 115148730 ttaattgatccctttatatgaggccattattgctttccagggtttcttagaataaacattggctgtgatgtcttacattttaatgcattgcttatttctgcatggtagtttttttaagttttccttcatta-ttttcataaattacattggtgtttaatttactttccctttactatcctagtcaggttataatatcagagtc-ataatagcataataaaatgaagtagagtacgttctttcctgtttcatgctcagaaagaattgtatgtgagattggaattactgttttgtttcatgtttgaaacaacttgccagtaaagtcatcatggcttgaaattatctttatgagatgatttctgactactgattgaatgcatttgttgtagcacaattcagatttttcttttcactttaggttacttttggaaaaacgcatcttccaagtaattgtacacattttacatatatttccaaatttattggattaaaagttttcatacaacgctaatttaccttcttgatatttgtattatttataACAAAACTCAATAAAGTGTGGCCAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatggtcattcattgacatattgtcaattttatgccataacaatagaattgattcattgcaacaaaccatatagcccaaaagcctaaaatatttaccatctgatcctttccaaa----------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131455354 717 + 190429646 TTAATTGATACCTTTATATGAGGCTGTTACTGCTTTCCAGCGTttcttagaataaacactggccacgatgtcttacattttaatgcattgcttatttctgcatggtag-ttttttaagttttccttcatta-ttttcataaattacattggtgtttaatttactttccctttactatcctggtcaggttataatatcagagtcaataatagcataataaaatgaagtagagtatgttctttcctgtttcatgctcagaaagaattgtaggtaagattggaattattgttttgtttcatgtttgaaacaacctgccagtaaagtcatcatggcttgaaattatctttgtgagatggtttctgactactgattaaatgcatttgttgtaacacaattcagattttgtttttcactttaggttacttttgg----atgcctgtttcaagtaactgtacacattttacatagatttccaaacttactgaattaaaagttttcatactacaccaatttactttattgatatttgtattatctataACAAAACTCAACAAATTGTGGCCAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatgctcattcactgacatattgtcaattttatgctacaacaatagaattgattagttgcaacaaaccatatagcccaaaagtcgaaaatatttaccatctgatcctttacaaa----------------- i rheMac8.chr5 I 338 C 0 s macFas5.chr5 130974366 696 + 189454096 TTAATTGATACCTTTATATGAGGCCGTTACTGCTTTCCAGCGTTTCTTAGAATAAACACTGGCCACGATGTCTTACATTTtaatgcattgc----------------------ttaagttttccttcatta-ttttcataaattacattggtgtttaatttactttccctttactatcctggtcaggttataatatcagagtcaataatagcataataaaatgaagtagagtatgttctttcctgtttcatgctcagaaagaattgtaggtaagattggaattattgttttgtttcatgtttgaaacaacctgccagtaaagtcatcatggcttgaaattatctttgtgagatggtttctgactactgattaaatgcatttgttgtaacacaattcagattttgtttttcactttaggttacttttgg----atgcctgtttcaagtaactgtacacattatacatagatttccaaacttactgaattaaaagttttcatactacaccaatttactttattgatatttgtattatctataACAAAACTCAACAAATTGTGGCCAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatgctcattcactgacatattgtcaattttatgctacaacaatagaattgattagttgcaacaaaccatatagcccaaaagtcgaaaatatttaccatctgatcctttacaaa----------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34966463 717 - 40319822 ttaattgatacctttatatgaggccgttactgctttccagcgtttcttagaataaacattggccacgatgtcttacattttaatgcattgcttatttctgcatggtag-ttttttaagttttccttcatta-ttttcataaattacattggtgtttaatttactttccctttactatcctggtcaggttataatatcagagtcaataatagcataataaaatgaagtagagtatgttctttcctgtttcatgctcagaaagaattgtaggtaagattggaattattgttttgtttcatgtttgaaacaacctgccaggaaagtcatcatggcttgaaattatctttgtgagatggtttctgactactgattaaatgcatttgttgtaacacaattcagattttgtttttcactttaggttacttttgg----atgcctgtttcaagtaactgtacacattttacatagatttccaaacttactgaattaaaagttttcatactacaccaatttactttattgatatttgtattatctataACAAAACTCAACAAATTGTGGCCAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatgctcattcactgacatattgtcaattttatgctacaacaatagaattgattagttgcaacaaaccatatagcccaaaagtcgaaaatatttaccatctgatcctttacaaa----------------- i macNem1.NW_012010911v1 I 346 C 0 s cerAty1.NW_012000798v1 4517808 717 - 9219162 ttaattgatacctttatatgaggccgttactgctttccagcgtttcttagaataaacattggccacgatgtcttacattttaatgcattgcttatttctacatggtag-ttttttaagttttccttcatta-ttttcataaattacattggtgtttaattcactttccctttactatcctggtcaggttataatatcagagtcaataatagcataataaaatgaagtagagtatgttctttcctgtttcatgctcagaaagaattgtaggtaagattggaattattgttttgtttcatgtttgaaacaacctgccagtaaagtcatcatggcttgaaattatctttgtgagatggtttctgactactgattaaatgcatttgttgtaacacaattcagattttgtttttcactttaggttacttttgg----atgcctgtttcaagtaactgtacacattttacatagatttccaaacttactgaattaaaagttttcatactaCACCAATTTACTTTATTGATACTTGTATTATCTATAACAAAACTCAACAAATTGTGGCCAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatgctcattcactgacatattgtcaattttatgctacaacaatagaattgattagttgcaacaaaccatatagcccaaaagtcgaaaatatttaccatctgatcctttacaaa----------------- i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79044484 720 + 135778131 ttaattgatacctttatatgaggccgttattgttttccagggtttcttagaataaatattggccacaatgtcttacattttaatgcattgcttatttctgtatggtagtttttttaagttttccttcatta-ttttcataaattacattggtgtttcatttactttccctttactatcctggtcaggttataatatcagagtcaataatagcataataaaatgaagtagaatatgttctttcctgtttcatgctcagaaagaattgtaggtaagattagaattattgttttgtttcatgtttgaaacaacctgccagtaaagtcatcat-gcttgaaattatctttgtgagatggtttctgactactgattaaatacatttgttgtaacacaattcagattttgtttttcac-ttaggttacttttggaaaaatgcatgtttcaagtaactgtacacattttacatcgatttccaaacttattgaattaaaagttttcatactacaccaatttaccttattgatatttgtattatctataACAAAACTCAACAAATTGTGGCCAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatgctcattcactgacatattgtcaattttatgctataacaatagaattgattacttgcaacaaacgatatagcctaaaagcctaaaatatttaccatctgatcctttacaaa----------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2820622 717 - 3013352 ttaattgatacctttatatgaggctgttattgctttccagcgtttcttagaataaacattggccacgatgtcttacattttaatgcattgcttatttctgcatggtag-tttttaaagttttccttcatta-ttttcataaattacattggtgtttaatttactttccctttactattctggtcaggttataatatcagagtcaataatagcataataaaatgaagtagagtatgttctttgctgtttcatgctcagaaagaattgtaggtaagattggaattattgttttgtttcatgtttgaaacaacctgccagtaaagtcatcatggcttgaaattatctttgtgagatggtttctgactactgattaaatgcatttgttgtaacacaattcagattttgtttttcactttaggttacttttgg----atgcctgtttcaagtaactgtacacattttacatagatttccaaacttactgaattaaaagttttcatactacaccaatttactttattgatatttgtattatctataACAAAACTCATCAAATTGTGGCCAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatgctcattcactgacatattgtcaattttatgctacaacaatagaattgattagttgcaacaaaccatatagcccaaaagtcgaaaatatttaccatctgatcctttacaaa----------------- i manLeu1.NW_012103277v1 C 0 C 0 s colAng1.NW_012114544v1 6043421 715 + 8656713 ttaattgatacctttatatgaggccgttattgctttccagggtttcttagaataaacattggccacgatgtcttacattttaatgcattgcttatttctgcatggtagtttttttaagttttctttcatta-ttttcataaattacattggtgtttaatttactttccctttactatcctggtcaggttataatatcagagtcaatagtagcataataaaatgaagtacagtatgttctttcctgtttcatgctcagaaagaattgtaggtaagattggaattattgttttgtttcatgtttgaaacaacctgccagtaaagtcatcatggcttgaaattatctttgtgagatgttttctgactactgattaaatgcatttgttgtaatacaattcagattttgtttttcactttaggttacttttgg----atgcatgtttcaagtaaccgtacacattttacatagatttccaaacttattgaattaaaagttttcatactacaccaatttaccttattgatatttgtattatctataACAAAACTCAACAAATTGTGGCCAATAAGCCAGAcagtatttataaataaagtattactggaacactgtcatgctcattcactgacatattgtcaattttatgct---acaatagaattgattagttgcaacaaaccatatagcccaaaagtctaaaatatttaccatttgatcctttacaaa----------------- i colAng1.NW_012114544v1 C 0 N 0 s calJac3.chr3 129477720 713 - 190850796 ttaactgatacattttgatgaggccatgattgctttccagggtttcttagaataaatactggccaggatgtcttacattttaatgcattgcttatgtctgcatggtag-ttttttaagttttccttcattatttttcataaattacattggtgtttaatttactttctttttactatcctggtcaggttataatatcagagtc-atgatagcatagtaaaatgaagtagagtatgttctctcctgttttatgctcagaaagaattgtatgtaaaattggaattattgttttgtttcatgtttcaagcaacctgccagtaaaatcatcatggcttgaaattacctttatgagatgatttctgactactgatta-atacatttgttatagcacaattcatattttgtttttcactttaggctacttttggaaaaatgcatatttcaaactgctacacacattttacatgtatttccaaatttagtgaactaaaagttttcatactacactaatttaccttcttgatatttgtaTTATATACAACAGAACTCAACAAATTGTAGCCAATAAGCCAGAAAATAtttatagata----attactgcaacactgccatgcacattcattaacatattgtcaattttgtgccacaacaatagaattgattagttgcaacaaaccatatggcccaaaaacctaaaatatttaccatctgattatt--------------------aaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6542580 733 - 25294431 tttattgatacatttttatgaggctgtgattgctttccagggtttcttagaataaacactggccaggatgtcttacattttaatgcattgcttatttctgcagggtag-ttttttaagttttccttcattatttttcataaattacattggtgtttaatttacttcctttttactatcctggtcaggttataatatcagagtc-gtgacagcatagtaaaatgaaggagagtatgttctctcctgtttcatgctcagaaagaattgtatgtaaaattggaattattgttttgcttcatgtttcaaacaacctgccagtaaaatcatcatggcttgaaattatctttatgagatgatttctgactactgatta-atacatttgttatagcacaattcagattttgtttttcactttaggcaactttaggaaaaatacatgtttcaaactactgcacacattttacatgtatttccaaatttattgaactaaaatttttcatactacactactttaccttcttgatatttgtaTCATATATAACAGAACTCAACAAATTGTGGCCAATAAGCCAGAAagtatttatagata----attactggaacactgccatgcacagtcattgacatattgtcaattttgtgccacaacaatagaattgattagttgcaacaaaccatatggcccaaaagcctaaaatatttaccatctgattatttccaaaaaaaaaaaaaaaagaaa i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14961835 708 + 15034901 ttaattgatacttttatatgaggccatgcttgctttccggggtttcttagaataaacactggccaggatgtcttacattttaatgcattgcttatttctgcatggtag-ttttttaagttttccttcattatttttcataaattacactggtgtttaatttactttctttttactatcctggtcagattataaattcagagtc-ataatagcatagtaaaatgaagtagagtatgttctctcctgtttcatgctccaaaagaattgtatgtaaaattggaattattgttttgtttcatgtttcaaacaacctcccagtaaaatcatcatggcttgaaattacctttatgagatgatttctgactactgatta-atacattttttatagcacaattcagattttgtttttcactttaggctacttttggaaaaatgcatatttcaaactactgcacacattttacatgtgtttccaaatttattgaactaaaagttttcatactacactaatttaccttcttgatatttgtaTTATATATAACAGAACTCAACAAATTGTAGCCAATAAGCCAGAAAGTATTT----ATA----Attactggaacactgccatgcacattcattgacatattgtcaattttgtgccacaacaaaagaattgattagctgcaacaaaccatatggcccaaaagcctaaaatatttaccatctgatcatttc--------------------- i aotNan1.NW_018507635v1 C 0 C 0 a score=29656.000000 s hg38.chr9_KI270719v1_random 87684 8 + 176845 aaaCAAAA s panTro5.chr4 135111277 7 + 194502333 caaC-AAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62082 8 + 95358 aaaCAAAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90496665 6 - 115148730 caa--aaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131456071 8 + 190429646 aaaaAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130975062 8 + 189454096 aaaaAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34967180 8 - 40319822 aaaaAAAA i macNem1.NW_012010911v1 C 0 C 0 s cerAty1.NW_012000798v1 4518525 8 - 9219162 aaaaAAAA i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79045204 8 + 135778131 aaaaAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012103277v1 2821339 8 - 3013352 aaaaAAAA i manLeu1.NW_012103277v1 C 0 N 0 s calJac3.chr3 129478433 8 - 190850796 aaaaaaaA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6543313 8 - 25294431 aaaagaaa i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14962543 6 + 15034901 --aaaaaa i aotNan1.NW_018507635v1 C 0 C 0 a score=6006.000000 s hg38.chr9_KI270719v1_random 87692 1 + 176845 A s panTro5.chr4 135111284 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62090 1 + 95358 A i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90496671 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131456079 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130975070 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012010911v1 34967188 1 - 40319822 A i macNem1.NW_012010911v1 C 0 N 0 s cerAty1.NW_012000798v1 4518533 1 - 9219162 A i cerAty1.NW_012000798v1 C 0 C 0 s chlSab2.chr7 79045212 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s calJac3.chr3 129478441 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6543321 1 - 25294431 a i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14962549 1 + 15034901 a i aotNan1.NW_018507635v1 C 0 C 0 a score=5005.000000 s hg38.chr9_KI270719v1_random 87693 1 + 176845 A s panTro5.chr4 135111285 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62091 1 + 95358 A i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90496672 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131456080 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 130975071 1 + 189454096 A i macFas5.chr5 C 0 C 0 s cerAty1.NW_012000798v1 4518534 1 - 9219162 A i cerAty1.NW_012000798v1 C 0 N 0 s chlSab2.chr7 79045213 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s calJac3.chr3 129478442 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6543322 1 - 25294431 a i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14962550 1 + 15034901 a i aotNan1.NW_018507635v1 C 0 C 0 a score=8190.000000 s hg38.chr9_KI270719v1_random 87694 2 + 176845 AA s panTro5.chr4 135111286 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62092 2 + 95358 AA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90496673 2 - 115148730 aa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 131456081 2 + 190429646 AA i rheMac8.chr5 C 0 N 0 s macFas5.chr5 130975072 2 + 189454096 AA i macFas5.chr5 C 0 N 0 s chlSab2.chr7 79045214 2 + 135778131 AA i chlSab2.chr7 C 0 N 0 s calJac3.chr3 129478443 2 - 190850796 AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6543323 2 - 25294431 aa i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14962551 2 + 15034901 aa i aotNan1.NW_018507635v1 C 0 C 0 a score=180132.000000 s hg38.chr9_KI270719v1_random 87696 116 + 176845 TTCTTGACATCTgatgtataattatttcctattttgattcctgagattgcatacttgtttcttctctta-attttatcaagcca-tttctccagagttttgtt--attgtatggctccta-- s panTro5.chr4 135111288 116 + 194502333 TTCTTCACACAAGATGTATAATTATTTCCTATTTTGATTCCTGAGAATGCATACTTGTTTCTTCTCTTA-TTTTTATCAAGCCA-TTTCTCCACAGTTTTGTT--ATTGTATGGCTCCTA-- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62094 116 + 95358 TTCTTGACACCTGATGTATAATTATTTCCTATTTTGATTCCTGAGATTGCATACTTGTTTCTTCTCTTA-ATTTTATCAAGCCA-TTTCTCCAGAGTTTTGTT--ATTGTATGGCTCCTA-- i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chr7b 90496675 120 - 115148730 ttcttgacacctgATGTATAATTATTTCCTATTTTGATTCCTGAGATTGCATACTTGTTTCTTCTCTTATTTTTTATCAAGCCATTTTCTCCAGAGTTTTGTTTACTTGTATGGCTCCTA-- i nomLeu3.chr7b C 0 N 0 s calJac3.chr3 129478445 119 - 190850796 TTATTGACACCTgatatataattacttcctattttgattcccgagattgcatatttgtttcttctctta-tttttatcaagctg-tttctccagagttatgtt-acttgtatggctccttta i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6543325 119 - 25294431 TTCTTGACACCTGTTATATAATTACTTCCTATTTTGATTCCTGAGACTGCATATTTGTTTCTTCTCTTA-TTTTTATCAAGCTG-CTTGTCCAGAGTTGTGTT-ACTTATATGGCTCCTTTA i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14962553 119 + 15034901 ttcttgacacctgATATATAATTACTtcctattttaattcctgagattgcatatttgtttcttctctta-tttttatcaagctg-tttctccagagttgtgtt-acttgtatggctccttta i aotNan1.NW_018507635v1 C 0 C 0 a score=385261.000000 s hg38.chr9_KI270719v1_random 87812 357 + 176845 caacaactaacaaacttttggccatatttcttgacttttctttccctgtattcttaatcactatgcatgtattttttatttccttttatttctgttgatatttctaacttcttccaataaattcagaacattttaaatattaatttgttgtcctcataaaataagaatttaaggttctacattttcctctaaaatgacacattttataatgtagtatacattttttaattaaaaatattttataatttccattatgatttgctcttgggtgttgagttactaagaagtatatttctGAGGtttttcttcaatatgactgactatagatattcgaatctagttattctcagaaagaga s panTro5.chr4 135111404 356 + 194502333 AAACAACTAACAAACTTTTGGCCATATTTCTTGACATTCCTTTCCCTGTATTCTTAATGACTATGCATGTA-TTTTTATTTCCTTTTATTTCTGATGATATTTCTAAGTTCTTCAAATAAATTCAAAACATTTCAAATATTAATTTGCTGTCCTCAtaaaataagaatttaaggttctaaattttcctctaaaatgaaacattttataatgtagtaaatattttttaattaaaaatattttataatttccattatgatttgctcttgggtgtcgagttactaagaagtatatttctGAGGtttttcttcaatatgactgactagagatattggactctagttattcgaagaaacaga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62210 354 + 95358 CAACAACTAACAAACTTTTGGCCATATTTCTTGACTTTTCTTTCCCTGTATTCTTAATCACTATGCATGTA-TTTTTATTTCCTTTTATTTCTGTTGATATTTCTAACTTCTTCCAATAAATTCAAAACATTTTAAATATTAATTTGTTGTCCTCATAAAATAAGAATTTAAGGTCCTACATTTTCCT-TAAAATGACACATTTTATAATGTAGTATACATTTTTTAATTAAAAATATTTTATAATTTCCATTATGATTTGCTCTTGGGTGTTGAGTTACTAAGAAGTATATTTCTGAGGtttttcttcaatat-actgactatagatattcgactctagttattctcagaaagaga i gorGor5.CYUI01000801v1 C 0 C 0 s calJac3.chr3 129478564 355 - 190850796 aaataactaacaaacttctggccatatttcttgacttttcttccctcatactcttagtcaccatgcatgtatttattatttccctttatttctaatgatttctttaagttATTCaaataaattca-aatattttaaatattaatttGTTGTACTCATAAAATTTAAATTTAGGGTTCTACATTTTCCTCTAAAATGTAACATTTTATAATGTAGTATATA-TTTTTTAttaaaaatattttctaattttcattgtgatttcttcttgggtgttgagttactaaaaagtatatttctGAGGtttttcttccatatggctgactgtagaatttggactccagttattctcagaaagCGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378129 6543444 354 - 25294431 AAATAACTAACACACTTCTTACCATATTTCTTGACTTTTCTTCCCCCATACTC--AGTCACCATACATGTATTTATTATTTCCTTTTATTTCCAATGATTTCTCTAAGTTCTTCAAATAAATTCA-AACATTTTAAATACAAATTTGTCGTACTCATAAAATAAAAATTTAGGGTTCTACATTTTCCTCTGAAATGCAACATTTTATAATGTAGTATATATTTTTTTAttaaaaatattttctaattttcattatgatttcttcttggttattgagttactcagaaatatatttctGGGGtttttcttcagtatgtctgactatagaatttggattccagttattctcagaaagaga i saiBol1.JH378129 C 0 C 0 s aotNan1.NW_018507635v1 14962672 353 + 15034901 aaataactaacaaa-ttttggccatatttcttgacttttcttcccccatactcttagtcaccatgcatgtatttattatttccttttatttctaatgatttctctaagttcttcaaataaattca-aacattttaaatattaatttgttgtactcctaaaataaaaatttagggttttacattttcctctaaaatgcaacattttataaggtagtatata-ttttttatt-aaaatattttctaattttcattatgatttcttcttaggtgtcgagttactaagaagtatatttctGAGGtttttcttcagtatggctgactgtagaatttggactccagttattctcagaaagaGA i aotNan1.NW_018507635v1 C 0 N 0 a score=9378.000000 s hg38.chr9_KI270719v1_random 88169 22 + 176845 aagcaaagttatggataaataa s panTro5.chr4 135111760 22 + 194502333 aagcaaagttatggataaataa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62564 22 + 95358 aagcaaagttatggataaataa i gorGor5.CYUI01000801v1 C 0 C 0 s calJac3.chr3 129478919 16 - 190850796 TA------TTTTAAAAAAATAA i calJac3.chr3 C 0 N 0 s saiBol1.JH378129 6543798 22 - 25294431 aaacaaagttacagatttataa i saiBol1.JH378129 C 0 C 0 a score=158983.000000 s hg38.chr9_KI270719v1_random 88191 369 + 176845 tcattaattccaatatctatatt--gacgggagtgctagagc----------accacaagaagaaacttgaacacagaaaaataaggaagcaaaaatccagcagagattatactctgagggacttgatgttccatggaaaagcataggtgggggtgtcttttgctcctctcacccctgtggcagactgcttgtttctgaactgttggagagccctccattctcacaagcccaagcactggtgtgggctgcaatcttggaacaacttgaggacagagaacaaggctactatttcctgcagtgcca-cttgcccttcacccagccccaagatgaggtggtgggcaccatactagatatgcctctgtggtggacctctatactgc s panTro5.chr4 135111782 381 + 194502333 aagttaattccaatatgtatattgagaggagagtgctagagcctctcagagaaccacaagaagaaacttgaacacagaaaaataaggaagcaagaacctagcagagattatactctgagggacttggtgtaacatggaaaagaataagtgggggtatcttttgctcctctcacccctatggcagactgcctgtttctgaaatgttggagagccctccactctcacaagcacaagtactggtgtggacagcaatcttggaaccacttaaggaaagagaacccggctactatttcctgcagtgcca-cttgaccttcaccaagaccgaagatgaggtggtgggcaccatactggatatgcctctgtgctggacttctatactac i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62586 370 + 95358 tcgttaattccaatatctatattgacggaagagtgctagagc----------accacaagaagaaacttgaacacagaaaaataaggaagcaagaa-ccagcagagattatactctgagggacttgatgttccatggaaaagcataggtgggggtgtcttttgctcctctcacccctgcggcagactgcttgtttctgaactgttggagagccctccattctcacaagcccaagcactggtgtgggccgcaatcgtggaataacttgaggacagagaacaaggctactatttcctgcagtgcca-cttgcccttcacccagccccaagatgaggtggtgggcaccatactggatatgcctctgtggtggacctctatactgc i gorGor5.CYUI01000801v1 C 0 C 0 s saiBol1.JH378129 6543820 380 - 25294431 -tcataactccaatatatgtatttaggggagagtactagagctgctcagaggaacacacaaagaaactggaatacagaaaaataaggaagcaaaaatctggcagagattatactctgagggacttggtgttccatag-aaagcgtaggtggcggtatctttggctcctctcacccctggggcagaccgctggtttctgaactgttgaagagcgctctactttcacaagcccaagcactgctgtagacagcaatctgggaactacttgaggacagagaaccagaatactagctcctgcagtgtcaggttgccctttacccagcccaaagttgaggtggtaggcaccatactggatattcacctgtcatggacctttatactgc i saiBol1.JH378129 C 0 N 0 a score=3618.000000 s hg38.chr9_KI270719v1_random 88560 7 + 176845 cTTTGAG s panTro5.chr4 135112163 7 + 194502333 cTTTGAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62956 7 + 95358 cTTTGAG i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116143950 7 - 135191526 CTTCGAG i ponAbe2.chr9 N 0 C 0 a score=90.000000 s hg38.chr9_KI270719v1_random 88567 1 + 176845 T s panTro5.chr4 135112170 1 + 194502333 G i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62963 1 + 95358 T i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116143957 1 - 135191526 T i ponAbe2.chr9 C 0 C 0 s rhiBie1.NW_016813587v1 148005 1 + 571637 T i rhiBie1.NW_016813587v1 N 0 N 0 a score=153371.000000 s hg38.chr9_KI270719v1_random 88568 324 + 176845 GAGAGAGAGGCTTGCCCCATCCCGTTGACAGCTTCCTTCTCCATCCCTGCGTCGAGCTATGGCTAGATTTCTCCATGAGGGCAGAGGGCGAGAGGCGTGAGAAGCATCTTCTGGAAGGTCTGCGGGCACCCTCCTGCGGGTGGACAATAAGCGCCTGGGAGGCCGTTGTCCTTGGTTGGGGAGCGGTCGTCTGGATCTAGCCTAGCAAAGAGGCTGCTCCGGATGGGGAGGGAATGAAAGCCCCTGCGGCTCCCACGCAGATGCCCACGTTGCCCAGGCCTTCACAGACCCCCAAACCGGAACCGCCGGGAAAACGATTGCCAA s panTro5.chr4 135112171 324 + 194502333 TACAGAGATGCTTGCCCCATCCGCTTGCCGGCTTCCTTCTCCGTCCCTGCGTCGAGCTGTGCCTACATTTCTCAATGAGGGCAGAAGGCAAGAGGAGTGAGAACCATCTACTTAAAGGTCTGCGGGCACCCTCCTGCGGGTGGACAATGAGCGCCTGGGAGGCCATTATCCTTGCTTGGGGAGCGGTCGTCTGGATCTAGCCTAGCAAAGAGGCTGCTCCGGATGGGGAGGGGATGAAAACCCCTGCGGCTCCGACGCAGATGCCCACGTTGCCCAGGCCTTCACAGACCCCCAGACCGGAACCGCCGGGAAGACGACTGCCAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 62964 324 + 95358 GACAGAGATACTTGCCCCATCCCGTTGACGGCGTCCTTCTCCGTCCCTGCGTCGAGCTGTGGCTAGATTCCGCGATGAGGGCAGAGGGCGAGAGGCGTGAGAAGCATCTTCTGGAAGGTCTGTGGGCACCCTCCTGCGGGTGGACAATGAGCGCCTGGGAGGCCGTTGTCCTTGGTTGGGGAGCGGTGGTCTGGATCTGGCCTAGCAAACAGGCTGCTCCGGATGGGGAGGGAATGAAAACCCCTGCGGCTCCGACGCAGATGCCCACGTTGCCCAGGCCTTCACAGACCCCCAAACCGGAACCGCCGGGAAAACGATTGCCAA i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116143958 319 - 135191526 GGCAGAGATGCTTGCCCCATCCCGTTGCCGCCTTCCTTTTGC-TCCCTGCGTTGAGCTGTGGCTAGATTGCTCGATGAGGGCAGAGGGCGAAACGAGTGAGCACCATCTTCTTGAAGGTGTGCGGGCACGCTCCTGCGGGTGGACAATGAGCACCTGGGAGGCCGTTGTCCTTGGTTGGGGAGCGGTCGTCTGGAT----CCTAGCAAAGAGGCTGCTCCGGATGTGGAGGGGATGAAAACCCCTGCGGGTCCGGCGCAGATGCCCACCTCGCCCAGGCCTTCACAGACCCCCAGACTGGAACCGCCGGGAAAACGACTGCCAA i ponAbe2.chr9 C 0 I 985 a score=255473.000000 s hg38.chr9_KI270719v1_random 88892 1043 + 176845 CCGGCCACAACACCCAGGCAGGGACGCGGGGAGAGGCTGACCAGAAGAAAGGCCGACGTGCAAGAAACCCAGCCTCCGGCGCACAGGGAACATGTGTCCCAAGGCGCACGCacacacagacggacagagacagaaagagaggg---cgacggaaagagcgagaagggaga---gagagagagagagagacttaagag----agagacagTAGTGGGcacacagacacgcacttgcgcgcgcgcgcacacacacagacacacag----acgcgcacacacacccccataacgcacacaGatatacagcaggtaacacccacccccaggcagcccctgaagctgccgggttctgctctccgcgactacgagccaccggtgagacagcagcccacgggcacacagcgagacctgtcctcgacatcacaaggccgccacttttggggagactcacccgcacaccgtccgcgcacgcctgaggctgggatcccgcgctgcctccccggcgatctgtctgaggtttcttcctcctggggtttcttcctgctggtggaccctccgcgaatcccggcctccggagaccgtcccggtaactgccctggccggggctggtctcagccccgactctgacgcacgatcacacagggctcccacttcgccaagtctcagggacccatcccttggcaacggtggcggtcactgtgaccgaagcggcggctcgggcctcgcgcatgagcgctggcgaggccgactcacccgccccacccccccttactcggc--agtcaggctgcggaccctttaaaaaatggcggcgacgccgcggctgcggggactggggtggcggtgctggagcttgcggcg---gcggctgcggtgcagccccaggcggtgggtgggaagaggactaccagaggggcctgcgggagacccagggtcggacccataggagtcctgtcgtcaggacctccttgatcggtcttctgcttgggttcccggtgaaggaggagcttcggggtgccggctgggctgcgcggactcctcttgggatccgatgatggatccc s panTro5.chr4 135112495 1052 + 194502333 CTGGCCACACGACCCAGGCAGAGACACGGGAAGAGGCTGACCAGAAGAAAGGCCGACGTGCAAGAAACCCACCTTCCGGCGTACAGGGCACACGTGACCCAAGTCACACGCACACACCGACGgacagagagagaaagagagggcgacgacggaaagagcgagaagggaga---gagagagagagagagacgtaagag----agagaCGGAAGTGGGCACACAGACACACAC--GCGCGGACGcacacacacacacacacacagacacacacacacacacacacCCATAACGCACACAGacatacagcaggcaacacccacccccaggcagctcctgaaattgcctgcttctgctctccgcgactacgaaccaccggcgagggagcagcccacgggcacacaggcagacctgtcctccacatcacaagggcgccacttttggggagactcacccgcacaccgtccgcacacgcctgaggctgggatcccgcgctgcctccccggcgatctgtctgaggtttcttcctcctggggtttcttcctcctggtggagcctccgcgaatcccgggctccggagaccgtcctggtaactgccctggccaggactggtctcagccccgactctgacgcacgatcacacagggctcctacttcgccaagtctcagggacccatccccgggcaacggtggcggtcactgtgacccaagcggcggctcgggcctcgcgcatgcgcactggcgaggccggctcacccgccgca-ccccccttacttggcagagtcaggctgcggaccctttaaaaaatggcggcgacacggcggctgcggggactggggcggcggtgatggaggttgcggcggccgcggccgcggcgcagcccgaggcggcgggtgggaagaggactaccagaggggcctgcgggagacccagggtcggacccgtaggagtcctgtggtcaggacctccttgatcgttcttctgcttcggttcccggggaaggaggagcttccgggtgccggctgggctgcgcggactcctcttgggatccgatgatggatccc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 63288 1032 + 95358 CCGGCCACAACACCCAGGCAGAGACGCGGGGAGAGGCTGACCAGAAGAAAGGCCGACGTGCAAGAAACCCAGCCTCCGGCGCACAGGGAACATGTGTCCCAAGGCGCACGCACAC-CAGACGgacagagacagaaagagaggg---cgacggaaagagcgagaagggagagaggagagagagaagaagacgagagagagaaagagagagacagaggcacacagacacgc-----cgcgcgcgc------------acacacag----acacacacacacac-CCCATAACGCA-ACAGacatacagcaggtaacacccacccccaggcagcccctgaagctgctgggttctgctctcc-cgactacgagccaccggtgagacagcagcccacgggcacacagggagacctgtcctcgacatcacaagggcgccacttttggggagactcacccgcacaccgtccgcgcacgcctgaggctaggatcccgcgctgcct-cccggcgatctgtctgaggtttcttcctcctggggtttcttcctgctggtggaccctccgcgaatcccggcctccggagaccgtcctggtaactgccctggccaggactggtctcagccccgactctgacgcacgatcacacagggctcctacttcgccaagtctcagggacccatccccgggcaacggtggcggtcactgtgaccaaagcggcggctcgggcctcgcgcatgcgcgctggcgaggccgactcacccgcccca-ccccccttactcggcagagtcaggctgcggaccctttaaaaaatggcggcgacgcggcggctgcggggactggggcggcggtgctggaggttgcggcggcggcggctgcggcgcagccccaggcggcgggtgggaagaggactaccagaggggcctgcgggagacccagggtcggacccataggagtcctgtcgtcaggacctccttgatcggtcttctgcttgggttcccggtgaaggaggagcttcggggtgtcggctgggctgcgcggactcctcttgggatccgatgatggatccc i gorGor5.CYUI01000801v1 C 0 C 0 e ponAbe2.chr9 116144277 985 - 135191526 I a score=6789.000000 s hg38.chr9_KI270719v1_random 89935 15 + 176845 acccggtgatcggga s panTro5.chr4 135113547 15 + 194502333 accgggcgatcggca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 64320 15 + 95358 acccggtgatcggga i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116145262 15 - 135191526 accgggtgatcggga i ponAbe2.chr9 I 985 M 11851 a score=114296.000000 s hg38.chr9_KI270719v1_random 89950 434 + 176845 atggggttacaatgcagtgaggcggaaaggcgctcgccagggcgcagaaagatccccagggccgcaaggcgtgctgtcggctgcaaaggcactgacccacgagcccactgcctccctccttcctgggtggagcaggggcctgccttcatctccaaggcccgggggttccggcatctcgacgcggcttccggcgacacgggcaaagagagacagagggtagtccgagccggagccagtgtgaccacacgtggccctgacgtcccccaagagcacatgcagtgagcccgtgtctctgaggccgtagtgggcgacgacgagacggacagtgatgtccaggcctgcgcccgggggccactggagacctgcccctcaaagcggaggaaactgccaagcgcacctgaaaacctgcgagacagggcctgtgcgcgagtcca s panTro5.chr4 135113562 433 + 194502333 atggggtcacaatgcagtgaggcggaaagggtctcgccggggcacagaaagatccccagggccgcaaggcgtgctgtcggctgcaaaggcactgacccacgagcccactgcctccctccttcctggggggagcaggggcctgccttcatctccaaggcccgggggctccggcatcccgacgcggcttccggcgacacgggcaaagacagacagaggcgagtccgagctggagccagtgtgaccacacgtggcactgacgtcccccaagagcacatgcagtgagcgtgtgtctttgaggccatagggggcgacgacgagacggacagggatttccaggtgtgcgcccgggggccactggagaccggccccacaaagcggaggaaaa-gccaagcgctcctgaaaacctgcgaggcagggcctgtgcgcgagtcca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01000801v1 64335 432 + 95358 atggggttacaatgcagtgaggcggaaaggctctcgccggggcacagaaagatccccagggccgcaaggcgtgctgtcggctgcaaaggcactgacccacgagcccactgcctccctccttcctgggtggagcaggggcctgccttcatctccaaggcccgggggctccggcatctcgacgcggcttccggcgacacgggcaaagagagacagaggctagtccgagccggagccagtgtgaccacacgtggcactgacgtcccccaagagcacatgcagtgagcctgtgtctctgaggccgtagtgggcgacgacgagacggacagtgatgtccaggc-tgcgcccgggggccactggagacctgcccctcaaagcggaggaaac-gccaagcgtacctgaaaacctgcgagacagggcctgtgcgcgagtcca i gorGor5.CYUI01000801v1 C 0 C 0 e ponAbe2.chr9 116145277 11851 - 135191526 M a score=600.000000 s hg38.chr9_KI270719v1_random 90384 1 + 176845 g s panTro5.chr4 135113995 1 + 194502333 g i panTro5.chr4 C 0 N 0 s gorGor5.CYUI01000801v1 64767 1 + 95358 g i gorGor5.CYUI01000801v1 C 0 C 0 s papAnu3.chrUn_NW_003929937v1 2650 1 - 4081 G i papAnu3.chrUn_NW_003929937v1 N 0 C 0 e ponAbe2.chr9 116145277 11851 - 135191526 M a score=12265.000000 s hg38.chr9_KI270719v1_random 90385 133 + 176845 tactcctacttcgccaagtctca----gggacccatcccccagcaacgg---tggcGGCACAGAGAGGTGCACGGCGCCGGCGCaggttcagagagataggaggct----------gatggggggaagttgagg---cacctggggcagagaa s gorGor5.CYUI01000801v1 64768 133 + 95358 tactcctacttcgccaagtctca----gggacccatccccctgcaacgg---tggcggcgcagagaggcgcaaggcaccggcgcaggcgcagagagacaggaggcc----------gatggggggaagttgagg---cacctggggcagagaa i gorGor5.CYUI01000801v1 C 0 C 0 s papAnu3.chrUn_NW_003929937v1 2651 140 - 4081 ---------TCCACCCAGGAGCAGAGGGGAGTCTCACTCTCAGGAATGAGACTGGATGTGCAGAG----GAAAGGCGACAGCACCTGTCCCAgaagacaaggacttgtctttcgaaggaggagggaggcagagggctcagatgggtcagtgaa i papAnu3.chrUn_NW_003929937v1 C 0 N 0 e ponAbe2.chr9 116145277 11851 - 135191526 M a score=221172.000000 s hg38.chr9_KI270719v1_random 90518 2941 + 176845 gaaaatgcatcgccaagcggtttctgggtcatacacggacgaaaatgtcttcccatcagcccttgcgctggtccccagggaccctggcatccgtcgttggcgcccagggttcgcgtcgggccactaggggtaccccaactcggacagaaggcccatgagttgaatttgaagtttgtgggaatagaggtgaggcaccaggggcagaaaaaaaaacaggagacctcgcctcagacaagcggggcctgggtcccccatggatgaaagtgccttcccattatgccatacgctgggcagagtggacagtgacgaccttagttcaagcccatggtgcgcttcgggaccgcttgcggtaccagaaagcgaacaaatggtccatgagcggaaggtg-ggcacctgaggcagagaaagtaaagaaacgcgctgccgagaagcagtgcctgggtccctcacggaggaaattgtcttctcgtcagcccgttcgctgggcactgacatccctggcgtctctggtttgatcccagggtacgcctcgggccactagtgttaccccaaggtgggcagaaagcccataaggggaaggtgaggcacctggggcagagaaaaaaaaaacttcgccgcagagaagcgcggcctgattccccacggacgaaagtgtcttctcatcagtccctgcactgggacctggggaccctggtgtccctggttcgagctcagtgtgagcctcagccgctaagtgcaccccaaggggagctttgggagcacaaagcccatgagggaaggtgagttttgagggaggagtggtgaggcacctgtcacagaaaaagaaaaaaaaaacaatccgcgccacggagaagcagggcctgggtcccccacgatgaaaatgccttcccatcagctcctgctctgggccctgtggaccctggagaccctggttcgagccacgggtgggcctcgggcccgctaggAATACCccccgtgcgcctctctgcgcctgcgcaggcgccgcgtgcctttgcgagggcggagctgccttctcctcagcacagacccggagagcattgccagggcggaggtgagttctcctctgcacagacttcggagatacagcaaagcggatcatgtgctcctcagcacagacccgggcgggcgggccaggggcaccgcgagggcggagctgcgttctgctcagcacacacccgggggacaccgcgaaggcagagcagcgttctcagcacagaccttgggggcactgcctcgctttgggactactcagagccgcatcgatggtgaataaaatccttcctgtttgcagccctgaataatcagggtcagagaccagttagaagggttcagtgtggaaaacgggaaagcaaaagcccctctgaatcctacccaccgaggttctccccagccaaggcgaggcggccgcagtgcgagatccacaccacagcctcggaaGACaagcgagcagaaatcccatgaggggcagttgaggtttgaggaaggcgaggtgaggcacctgtggcagaaaaaaaaaaaaccgcaccacggagaagcagagcctgggtccccaacggacaaaagtgtcttcccattagcccttgcgctgggcccaggtgaccctggcattcctggttcgagaccagggtgcgcttcaggccgctaggggtacccaaaagcgggcagaaggcccatgaggtgaaggtgatgcacctggggcagag---aaaaaaaaaaaacaaccgcgccgcgtataagcggggcctggctcccccacagaagaaactgtcctcacatcagcgcttgcgttgcgccccagggaccctggtatccctggctcgagcccagcgtgcgcctcggcctgctaggggtaccccaaggcagacagaaggcccatgagggaaaggtgagacacctggggcagagaaaaaaataaaaaaactgcgccgcccagaagtggggcctgggtcccccacagacgaacgtccctacccatcagccctgaactgggccccggagaccctagcgtccctggctcgaaaccagggtgcgctttggacccgctagtggtacctcaaggcgggcagaaagcccatgaggggaaggtgaggcacctggggaaaagcgaaaaaaacaaaaacaaaaacaaaaacgtcgcagagaagcagagcctgggtccccgaggaagaaagtgtcttcgcatcagcccttgcgctgggccccggggaccctggtgtcccagtttcgaacccagggtgtgcgtctggccactaggtgtaccccaaggcagacagaaggcccatgaggggaaggtgaggtttgagggaggagcggtgaggcacctgtggcag-aaaaaaaaaaaacgcgccacggagaagcagggcatgggtcccccacggacgaaagtgccttcccatcaggccctgcgctgagccccgtggaccctggcgaccttggctcaaacccagggtgcgcctcgggcggttaggggtaccccaaggcgggcagaaagcccatgaggggaagttgaggtttgagggaggagaggtgaggcacctgtggcaggaaaaaaaaaaaaaaaccgcaccgcggagaagcggggcttgggtccggcacggacgaaagtgtcttcccatcagcccttgcgctgcgccccggggaccctgacgaccctgattcgagccgagggtgcgcctcggtccactaggggtaccccaaagcaggcagatggctca-----------tgagg-----ggaagg-----tgaggtacctggggaag-ccaaaagaaaaaaaaaactgcgccgcggagaagcggtgcctgggtcccccacggacgaaagtgtcttcctatcagcccttgcactgggccccgggaaccctggcgtccctggttcgacctcatggttcgccttgggccgctaggggtaccccaaggcgggcagaaggcccatgaggcaaag s gorGor5.CYUI01000801v1 64901 2874 + 95358 aaaaatgcatcgccaagcggtttctgggtcatccacggacgaaaatgtcttcccatcagcccttgcgctggtccccagggtccctggcatccgtcgttggcgcccagggtgcgcgtcgggccactacgggtaccccaactcggacagaaggcccatgagttgaatttgaagtttgtgggaatagaggtgagtcaccaggggcag-aaaaaaaacaggagacctcgcctcagacaagcggggcctgggtcccccatggatgaaagtgccttcccattatgctgtacgctgggcagagtggacagtgacgaccctggttcaatcccagggtgcgcttcgggactgcttgcggtaccagaaag-gaacaaa-ggtccatgagcggaaggtgaggcacctgaggcagagaaagtaaagaaacgtgccgcagagaagcagtgcctgggtccctcacgga-gaaattgtcttctcctcagcccgttcgctgggcactgaggtccctggcttccctggtttgatcccagggtacgcctcgggccacttgtgttaccccaaggtgggcagaaagcccataaggggaaggtgaggcacct-gggcagag-aaaaaaaaacttcgccgcagagaagcgcgtcctgattccccacggatgaaagtgttttcccatcagtccctgcactgggacccggggaccctggtgtccctggttcgagctcagggtgtgcctcagccgctaagtgca-cccaagtggagctttgggagcacaaagcccatgagggaaggtgagttttgagggaggagtggtgaggcacctgtcacagaaaaag-aaaaaaaaacaacccgcgccacggagaagcaggg-ctgggtcccccacgatgaaaatgtcttcccatcagctcctgctctgggccctgtggaccctggagaccctggttcgagccaccggt-ggcctc-ggcccgctaggggta-cccctgtgcgcctctctgcgcctgcgccggcgccgtgtgcctttgcgagggcggagctgccttctcctcagcacagacccagagagcattgccagggcggagctgagttctcctctgcacagacttcggagatacagc-aagcggagcatgttctcctcagcacagaccc-ggcgggcgggccgggggcaccgcgagggcggagctgcgttctgctcagcacacacccgggggacaccgcgaaggcagagcagcgttctcagcacagaccttgggggcgctgcctcgctttgggactactcggagccgcatcgatggtgaataaaatccttcctgtttgcagcccttaataatcagggtcagagaccagttagaagggttcagtgtggaaaacgggaaaccaaaagcccctctgaatcctacccatcgaggttct-cccagccaaggcgaggcggccgcagtgcgagatccacaccgcagcctcggaaGACaagcgggcagaaatcccatgaggggcagttgaggtttgaggaaggcgaggtgaggcacctgtggcag-aaaaaaaaaaaccgcaccacggagaagcagagcctgggtccccaacggacaaaagtgtcttcccatcagcccttgcgctgggcccaggtgaccctggcattcctggttcgagaccagggtgcgcttcaggccgctaggggtacccaaaagcgggcagaaggcccatgaggggaaggtgatgcacctggggcagagaaaaaaaaaaaaaaaaaaccgcgccgcgtataagcggggcctggct-ccccacagaagaaactgtcctcacatcagcgcttgcgctgcgccccagggaccctggtatccctggctcgagcccagcgtgcgcctcggcctgctaggggtaccccaaggcagacagaaggcccatgagggaaaggtgag-cacctggggcagagaaaaaaataaaaaaactgcgccgcccagaagtggggcctgg--tccccacagacgaacgtccctacccatcagccctgaactgggccccagagaccctagcgtccctggctcgaaaccagggtgcgcttcggg-ccgctagtggtacctcaaggcgggcagaaagcccatgaggggaaggtgaggcacctggggaaaag-gaaaaa---------aaaaaaaaaaacgtcgcagaga---agaacctgggt-cccgaggaagaaagtgtctt-gcatcag-ccttgcgctgg--ccccgggaccctgg-gt-ccag-ttcgaacccagg--gtgcgtctggccactagg-gtaccc--aatcggacagaagg-ccatgaggggaaggtgagg-ttgagggagga--ggtga-gca-ctgtggcagaaaaaaaaaaaaacacgc--cggagaagc-gggcctgggt--cccaaggacgaaagtgcctt-ccatca-gccctgcgctggg-cccatggacactggcgaccctgg-ttagagccagggtgcgcctcggccca-taggggtacccaaag--gggcagaatgctcattaggggaaggt----------------------agacacctg-ggcag--agaaaaaaaaaaaaccgcgccgc-aagaagcgggacctgggtcccccactgacgaaagtgtctttccgtcagcccttgagctgggtcccgaggacgctgacatccctggttcgagcccacgctgcgcctcaggctgctacgagtaccccaaggaggaaagaaggcccaaaagtttcagctgaggtttgagggaggagagatgaggcacctgtggcagaaaaaaaaaaaaaaaaaaacgcgcagcggagaaccggtgcctgggtctccca-ggacgaaagtgccttcccatcagccactgcgcttggccccatggaacctggcctccatggttcgagcccagggtgcgcctcgggccgcta-gggtacccaaagg-gtgcagaaggcccatgaggggaag i gorGor5.CYUI01000801v1 C 0 C 0 e ponAbe2.chr9 116145277 11851 - 135191526 M a score=1366.000000 s hg38.chr9_KI270719v1_random 93459 14 + 176845 gtgaggtttgaggg s gorGor5.CYUI01000801v1 67775 14 + 95358 gtgaggcacctggg i gorGor5.CYUI01000801v1 C 0 I 12 s ponAbe2.chrUn 60074429 14 - 72422247 ttgacgtttgaggg i ponAbe2.chrUn n 985 C 0 a score=482.000000 s hg38.chr9_KI270719v1_random 93473 5 + 176845 aggag s ponAbe2.chrUn 60074443 5 - 72422247 aggag i ponAbe2.chrUn C 0 n 0 e gorGor5.CYUI01000801v1 67789 12 + 95358 I a score=0.000000 s hg38.chr9_KI270719v1_random 93478 18 + 176845 aggtgaggcacctgtggc e ponAbe2.chrUn 60074448 0 - 72422247 n e gorGor5.CYUI01000801v1 67789 12 + 95358 I a score=45254.000000 s hg38.chr9_KI270719v1_random 93496 732 + 176845 agaaaaaaaaaacgcgccacggagaaggggggcctgggt-cccccattgacgaaagtgctttaccattagcccctgcgcttggccccgtgcaccctggcgaccctggttcgaacccagtgtgcgcctcgggccgctagccgtaccccaaagtgggcagaa-gcccatgaggggaa---------------------ggtgaggcacctggggcggagaaaaaaggaaaaaacctcgccacggagaagggaggcctgggttccccacgaaagaaagtgccttcccatcagacccggtgctaggccccagggaccctggcatccctggttcgagcccagggtgcgcctcgggccgctgggggtaccccaaggcggacagaaagcccatgagggga---------------------aggtgaggcacctgtggcag--------aaaaaaaaaaaaaaccgcgccgcagtgaagctgggcctgggtcccccacttacgaaagtgccttcccatcaggccttgcgctggacctcgcggacactggtgaccctggttcgagcccagggtgcgccttgggcccgctaggggtacccagaagcgggcagaaggcccatgaggggtaggtgaggcacctgaggcag----agaaaaaaaaaactatgccgcggagaagcggggcctgggtcccccacggaagaaagtgtcttcccatcagcccctgagctgggcccacgggaccctggcatccctggttcaaaccagggtgcgcttcgggcctcttggggtaccc s gorGor5.CYUI01000801v1 67801 778 + 95358 aaaaaaaaaaacctcgccgcggagaagcggggactgggtccccccacggacgaaagtgtcttcccatcagcccttgcgctgggccccagggaccctggcttccctggttcgagcccacagtgcacctcgggccgctaggtgtaccccaaggcagacagaaggcccatgaggggaaggtgaggtttgagggaggagcggtgaggcacctgtggc--agaaaaaa--aaaaaaacgcgccacggagaagcagggcatgggtcccccacggacgaaagtgccttcccatcaggccctgcgctgagccccgtggaccctggcgaccttggctcaaacccagggtgcgcctcgggccgttaggggtaccccaaggcgggcagaaagcccatgaggggaagttgaggtttgagggaggagaggtgaggcacctgtggcagaaaaaaaaaaaaaaaaaaaaaaacgcgccgcagagaagcggggcctgggtccgccacggac-aaagtgtcttcccatcagcccttgcgctgcgccccggggaccctgacgaccctgattcgagccgagggtgcgcctc-ggtccactaggggtaccccaaagcaggcagatggctcatgaggggaaggtgaggtacctggggcagccaaaagaaaaaaaaactgcgccgcggagaagcggtgcctgggt-ccccacggacgaaa--gtcttcctatcagcccttgcactgggccccgggaaccctggcgtccctggttcgccccatggttcgcctcgggccgc-tagggtaccc i gorGor5.CYUI01000801v1 I 12 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=31390.000000 s hg38.chr9_KI270719v1_random 94228 208 + 176845 catggtgggcagaaagcctataaggggaaggtgaggtttgagggaggagaggtatggcacctgtggcataaaagaaaaaaaaaaaaaccgcgccacagagaagcagggcctgggtcccccaaggacgaaagtgccttctcatctgcccttgtgctgggccccggggaccctgtcgtccctggctcgaatccagggtgcgcctctggcc s gorGor5.CYUI01000801v1 68579 201 + 95358 aa-ggcgggcagaaggcccatgaggcgaaggtgaggtttgagggaggagaggtgaggcacctgtggcagaaaaaaaaaaaaaaaa---cgcgccacggagaag-ggggcctgggtccccc-aggacgaaagtgctttaccattagcccctgcgcttgg-cccgtgcaccctggcgaccctggttcgaacccagtgtgcgcctcgggcc i gorGor5.CYUI01000801v1 C 0 I 1006 s nomLeu3.chrUn_GL397501_2 264927 185 + 1485088 cacagcgggcagaaggcccatgaggggaaggtga---------------------gtcacctggggtagagaaaaaaaaaaaaaa-acctcgctgcggagaagcggggcctgggacccca-caggtgaaagggtcttcccatcaacccttgcgctgggccctggggaccctggcgacccttattcgagcccagcgtgcgcctggggcc i nomLeu3.chrUn_GL397501_2 N 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=0.000000 s hg38.chr9_KI270719v1_random 94436 1 + 176845 t e ponAbe2.chrUn 60074448 0 - 72422247 I e nomLeu3.chrUn_GL397501_2 265112 0 + 1485088 C e gorGor5.CYUI01000801v1 68780 1006 + 95358 I a score=61416.000000 s hg38.chr9_KI270719v1_random 94437 283 + 176845 gctaggggtaacccaaagcgggcagaaggcgcatgaggggaaggtgagtcacctggggcagagaaaaaaaaaaaacacacagcactgcggagaagcggggcctgggtcccccacgggtgaaagtgtctccccatcagcccttgcgctgtgccctggggaccctggcatccctggttcgagcccagggtgcgcctctggccgcc-ggggtaccacaaggtggacagaaggcccatgagggaaaggtgaggcacctggggcagagaaaaaaaact--gtgccacggag s gorGor5.CYUI01000801v1 69786 276 + 95358 actaggggtaccccaaagcgggcagaaggcccatgaggggaaggtgacccacctggggcagaggaaaaaaaaaac------gcgccacggagaagcggggcctggg-accccacggaagaaagtgtctccccatcagcccttgcactgtgccctggggaccctggcatccctggttcgagcccagggtgagccttgggccgccaggggtaccacaaggtggacagaaggtccatgaggggaaggtgaggcacctggggcagagaaaaaaaaac---tgccacggag i gorGor5.CYUI01000801v1 I 1006 C 0 s nomLeu3.chrUn_GL397501_2 265112 283 + 1485088 gctagaggtaccccaaagcgggcagaaggcccatgaggggaaggtgacccacctggggcagaggaaaaaaaaaaaaac---gttcctcggaaaagcagggcctgggtcccccatggaaaaaagtgtctccccatcagcccttgcgctgtgccccagggaccccggcatccctggtttgagcccagggtgtgcctcgggcccctaggggtaccccaaggtggacagaaggcccatgaaatgaaggtgagacacctggggcaaagaaaaaaaaaactgcgccgccgag i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=10637.000000 s hg38.chr9_KI270719v1_random 94720 40 + 176845 aagcggggactgg--gtcccccacggacgaaagtgtattccc- s gorGor5.CYUI01000801v1 70062 39 + 95358 aagcggggactgg--gtcccc-acggacgaaagtgtattccc- i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265395 40 + 1485088 aagtggggactgg--gtccctcatggacaaaagtgtattccc- i nomLeu3.chrUn_GL397501_2 C 0 C 0 s papAnu3.chrUn_NW_003895178v1 29640 42 + 241206 AACCTGGGACCAGATGTCCCCCTGGGGCCTGAGTGT-TTCCCG i papAnu3.chrUn_NW_003895178v1 N 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=9735.000000 s hg38.chr9_KI270719v1_random 94760 18 + 176845 ------atgaacccttgcgttgag s panPan2.chr2B 132563380 18 + 247869975 ------atgaacccttgcgctgag i panPan2.chr2B N 0 C 0 s gorGor5.CYUI01000801v1 70101 18 + 95358 ------atgaacccttgcgctgag i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265435 18 + 1485088 ------atgaacccttgtgctgag i nomLeu3.chrUn_GL397501_2 C 0 C 0 s papAnu3.chrUn_NW_003895178v1 29682 24 + 241206 GTGCCTGAAGACTTCTGGGTTTAG i papAnu3.chrUn_NW_003895178v1 C 0 I 44 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=1200.000000 s hg38.chr9_KI270719v1_random 94778 2 + 176845 cc s panPan2.chr2B 132563398 2 + 247869975 cc i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 70119 2 + 95358 cc i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265453 2 + 1485088 cc i nomLeu3.chrUn_GL397501_2 C 0 C 0 e papAnu3.chrUn_NW_003895178v1 29706 44 + 241206 I e ponAbe2.chrUn 60074448 0 - 72422247 I a score=25444.000000 s hg38.chr9_KI270719v1_random 94780 38 + 176845 ccagggaccctggcgtccctggttcgagtccagtgtgc s panPan2.chr2B 132563400 38 + 247869975 ccagggactctggcgcccctggttcgagtccagtgtgt i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 70121 38 + 95358 ccagggaccctggcgtccctggttctagtccagtgtgc i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265455 38 + 1485088 ccagggaccttggcgtccctggttcgagtccagtgtgt i nomLeu3.chrUn_GL397501_2 C 0 C 0 s papAnu3.chrUn_NW_003895178v1 29750 35 + 241206 CCAGGGAC-CTGATGTCCAT--TTGGAGTCAAGTGTGC i papAnu3.chrUn_NW_003895178v1 I 44 N 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=43716.000000 s hg38.chr9_KI270719v1_random 94818 84 + 176845 acctaaggcggctaggggtaccccaagtcgaacagaaggcccatgaggggaagtgaggtttcagggagtagaggtgaggcacct s panPan2.chr2B 132563438 83 + 247869975 gcctagggcggctaggggtaccccaagccggacagaaggcccatgaggg-aagtgaggtttcagggagtagaggtgaggcacct i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 70159 84 + 95358 acctaaggcggctaggggtaccccaagtcggacagaaggcccatgaggggaagtgaggtttctgggagtagaggtgaggcacct i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265493 84 + 1485088 gcctagggcagctaggggtaccccaagccggacagaaggcccatgaggggaagtgaggtttcaggaagtagaggtgaggcacct i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=1910.000000 s hg38.chr9_KI270719v1_random 94902 2 + 176845 gt s panPan2.chr2B 132563521 2 + 247869975 gt i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 70243 2 + 95358 gt i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265577 2 + 1485088 gt i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 10183 2 + 30162 GT i macFas5.chr9_KE145707_random N 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=4140.000000 s hg38.chr9_KI270719v1_random 94904 4 + 176845 ggca s panTro5.chr20 31454254 4 + 66533130 GGCA i panTro5.chr20 N 0 C 0 s panPan2.chr2B 132563523 4 + 247869975 ggca i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 70245 4 + 95358 ggca i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265579 4 + 1485088 ggca i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 10185 4 + 30162 GACT i macFas5.chr9_KE145707_random C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=2800.000000 s hg38.chr9_KI270719v1_random 94908 1 + 176845 g s panTro5.chr20 31454258 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132563527 1 + 247869975 g i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 70249 1 + 95358 g i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265583 1 + 1485088 g i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 10189 1 + 30162 G i macFas5.chr9_KE145707_random C 0 C 0 s chlSab2.chrUn_KE147573v1 15397 1 + 85383 G i chlSab2.chrUn_KE147573v1 N 0 C 0 s colAng1.NW_012118199v1 545450 1 - 854822 G i colAng1.NW_012118199v1 N 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=995898.000000 s hg38.chr9_KI270719v1_random 94909 376 + 176845 GTGTCCATCTGTAAACTACTTATCCATGTGAGCCCTGATGTCCACCAGGGGCTGGATGTCCCCCTGGGGCTA------------------GATGTTCGCCTGGAGCCTGGTGCCCACCTGGGGCCTGATATCCAGGAGAGGCTTAGTTATCCACCT--------ATGGCCATCTGGAG------------------CCAGATGCCCACC-TGAGGTCTGGTGTACACCTAAGGCCCGATCTCTACCTGG-----------------GGCTTGGGTGTTCATGTGGGGCCTGATGTCCACCTAAGACCATGTGTTCACCTGGAGCCTGGGTGACCATCTGGGTTATGATGTTCAGCTGGGGCCCAGAGTTCAGCTAGGGACTGGGTCAACCTTCTGCTTGTTGCACACCTGGGGACTAGGTACCCACCTGGGCTCCAGT s panTro5.chr20 31454259 376 + 66533130 GTGCCCATCTGTAAACTGTTTATCCATGTGAGCCCTGATGTCCACCAGGGGCTGGATGTCCCCCTGGGGCTA------------------GATGTTCACCTGGAGCCTGGTGTCTACCTGGGGCCTGATATCCAGGAGAGGCTTAGTTATCCACCT--------ATGGCCATCTGGAG------------------CCAGATGCCCACC-TGAGGTCTGGTGTACACCTAAGGCCTGATATCTACCTGG-----------------GGCTTGGGTGTTCATGTGGGGCCTGATGTCTACCTAAGACCATGTGTTCACCTGGAGTCTGGGTGACCATCTGGGTTATGATGTTCAGCTGGGGCCCAGAGTTCAGCTGGGGACTGGGTCAACCTTCTGCTTGTTGCACACCCGGGGACTAGGTACCCACCTGGGCTCCGGT i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132563528 376 + 247869975 GTGTCCATCTGTAAACTGTTTATCCATGTGAGCCCTGATGTCCACCAGGGGCTGGATGTCCCCCTGGGGCTA------------------GATGTTCACCTGGAGCCTGGTGTCTACCTGGGGCCTGATATCCAGGAGAGGCTTAGTTATCCACCT--------ATGGCCATCTGGAG------------------CCAGATGCCCACC-AGAGGCTTGGTGTACACCTAAGGCCTGATATCTACCTGG-----------------GGCTTGGGTGTTCATGTGGGGCGTGATGTCCACCTAAGACCATGTGTTCACCTGGAGCCTGGGTGACCATCTGGGTTATGATGTTCAGCTGGGGCCCAGAATTCAGCTGGGGACTGGGTCAACCTTCTGCTTGTTGCACACCTGGGGACTAGGTACCCACCTGGGCTCCGAT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 70250 376 + 95358 GTGTCCATCTGTAAACTGCTTATCCATGTGAGCCCTGATGTCCACCAGGGGCTGGATGTCCCCCTGGGGCTA------------------GATGTTCGCCTGGAGCCTGGTGCCCACCTGGGACCTGATATCCAGGAGAGGCTTAGTTATGCACCT--------ATGGCCATCTGGAG------------------CCAGATGCCCACC-TGAGGTCTGGTGTACACCTAAGGCCTGATCTCTACCTGG-----------------GGCTTGGGTGTTCGTGTGGGGCCTGATGTCCACCTAAGACCATGTGTTCACCTGGAGCCTGGGTGACCATCTGGGTTATGATGTTCAGCTGGGGCCCAGAGTTCAGCTGGGGACTGGGTCAACCTTCTGCCTGATGCACACCTGGGGACTAGGTACCCACCTGGGCTCCAGT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265584 376 + 1485088 aTGTCCATCTGAAAACTGTTTATCCATGTGAGCCCTGATGTCCACCAGGGGCTGGATGTCCCCCTGGGGCTA------------------GATGTTCACCTGGAGGCTGGTGTCTACCTGGGGCCTGATATGCAGGAGAGGCTTAGTTATCCACGT--------ATGGCCATCTGGAG------------------CCAGATGCCCACC-TGAGGCTTGGTGTACACCTAAGGCCTGATATCTACCTCG-----------------GGTTTGGGTGTTCATGTGGGGCCTGATGTTCACCTAAGACCATGTGTTCACCTGGAGCCTGGGTGACCATCTGGGTTATGATGTTCAGCTGGGGCCCAGAGTTCAGCTGTGGACTGGGTCAACCTTCTGCCTGATGCACACCTGGAGACTAGGTACCCACCTGGGCTCCGGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 10190 431 + 30162 GTGTCCTCCTGGAAATGGTTTATCCATGCAGGACCTGATGTCCACTTGGGGCTGAATGTCCCTCTGGGGCTAGACATCCGCTTGTGGCCTGATGTCCATCTAGGGCCTGGTGTCCACCTGGAGTGTGATGTTCACCTGGGGC-TAGGTGTCCACATGGGGCCTGATGTCCATATGAAGACTGGGTGTCCACTAGGACCTGATGTTCACCATGGGCCTAGATATCCACCTGGGGCCTGATATCTACCTGGTGACCTGTGTCCATCTGAGGGCTGGTGTCCAC-CTGGGCCTGATAGCCACCTAAGATTTGGTGTTTATCTGAGGCCTGGGTGACCACCTGATATCTCATGTTCAGCTGGGACCCAGAGTTCAACTGGGGACTATG-----TGTCAACCTGGTGCACATCTGAGGACTAGGTACCCACCTGGGTGCTGGT i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 33349 374 - 323133 GTGTTCATCTGTAAACTGTTTATCCATGTGAACCCTGATGTCCACCAGAGGCTGGATGTCCCCCTGGGGCTA------------------GATGTTCACCTAGGGCCTGGTGTCCACCTGGGGCCTGATATTCACCAGACGCTTAGTTATCCATCT--------ATGGCCATCTGGAG------------------CCAGATGCCCGCC-TGAGGCTTGGTGTGCACCTCAGGCCTGATATCTACCTGG------------------GTTTTGGTGTTCATGCAGGGCCTGATGTCCACCTAAGACCATGAGTTC-TTAGAAGCCTGGATGACCATCTGGGTTCTGATGTTCAGCTGGGGCCCAGAGTTCAGCTGGGGACTGGGTCAACTTTCTGCTTGATGCACACCTGGGGACTAGGTACTCACCTGGCCTCCAAG i cerAty1.NW_012003779v1 N 0 I 29 s chlSab2.chrUn_KE147573v1 15398 375 + 85383 GTGTCCATCTGAAAACCATTTATCTGTGTGAACCCTGATGTCCACCAGGGGCTGGATGTCCCCCTGGGGCTA------------------GATGTTCACCTAGGGCCTGGTGTCCACCTGGGGCCTGATATTCACCAGAGGCTTAGTTATCCACCT--------ATGGCCATCTGGAG------------------CCAGATGTCCACC-TGAGGCTTGGTGTGCACCTCAGCCCTGGTATCTGCCTGG------------------GCTTGGGTGTTCATGTGGGCCCTGATGTCCACCTAAGACCATGTGTTCACCTGGAACCTGGGTGACCATCTGGGTTCTGATGTTCAGCTGGGGCCCAGAGTTCAGCTGGGGACTGGGTCAACCTTCTGCCTGATGCACACCTGGGGACTAGGTACCCACCTGGGCTCCGGT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 545451 352 - 854822 GTGTCCATCTGAAAACTGTTTATCCATGTGAGCCCTGCTGTCCACCAGGGGCTGGATGTCCCCCTGGGGTTA------------------GATGTTCACCTAGGGCCTGGTGTCCACCTGGGGCCTGATATTCACCAGAGGC-------------------------------TGAAG------------------CCAGATGTCCACC-TGAGGCTTGGTGTGCACCTCAGGCCTGATATCTACCTGG------------------GCTTGGGTGTTCATTTGGGGCCTGATGTCCACCTAAGACCATGTGTTCACCTGGAGCCTGGGTGACCATCTGGGTTCTGATGTTCAGCTGGGGCCCAGAGTTCAGCTGGGGACTGGGTCAACCTTCTGCCTGATGCACACCTGGGGACTAGGTACCCACCTGGGCTCCGGT i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=20475.000000 s hg38.chr9_KI270719v1_random 95285 8 + 176845 GTTCACTG s panTro5.chr20 31454635 8 + 66533130 GTTCACTG i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132563904 8 + 247869975 GTTCACTG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 70626 8 + 95358 GTTCACTG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265960 8 + 1485088 ATTCACTG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 10621 8 + 30162 GTTCACTG i macFas5.chr9_KE145707_random C 0 I 18 s chlSab2.chrUn_KE147573v1 15773 8 + 85383 GTTCACTG i chlSab2.chrUn_KE147573v1 C 0 I 18 s colAng1.NW_012118199v1 545803 8 - 854822 GTTCACTG i colAng1.NW_012118199v1 C 0 I 18 e ponAbe2.chrUn 60074448 0 - 72422247 I e cerAty1.NW_012003779v1 33723 29 - 323133 I a score=1242047.000000 s hg38.chr9_KI270719v1_random 95293 515 + 176845 G------------------GGCCTTGTATTTACCTAGGACCAGTCCATCCATCTGGGGTCTGAGTGCCCTCATGGAGCCTGGAGTTTT-CCTGGGGACTGGGGTCTGCCTTAGGCTTAA-GTGTACATCTGTGGCCTCATGTCCACCTTGGGACAGATGTCCA--CCTGGGGAC-GGATATTCAGTAGGGGCCTGAGTGTCCACCTGGTTTTTGATGTCTACCTGGGGCCTGGTGTTCAT-CTGAGGTGTGATATCCACCTGGGGCCTGGACATTTGCC-TGGAACCTGATGTACAGCTGGTGCCTGAAGTTCGTCTATGCCTGGTGTCTCCCTGGGGCCAGGTAGTCAAACACAGGGCCTGAATACCTTCTAGAGTTCAGTGTTCACCTGGG--GTCCGAAGT-CCACTTAGGGCTTGGGTGTCCAAATAGGGCCTGGTGTCAGCTTGAGA-TTTGTGTATTTACCTAGGGCCTGGTTGTCCACTTGGGGCTTGA-TTTTTCACTTGGTTTTT---GTGTTAATCAGG----GGTCT-AGTGTCCACGTGGG s panTro5.chr20 31454643 533 + 66533130 GAGCCTGATGTCTACCTGGGGCCTTGTATTTACCTAGGACCAATGCATCCACCTGGGGTCTGAGTGCCCTCATGGAGCCTGGAGTTTT-CCTGGGGCCTGGGGTCTGCCTTAGTCTTAA-GTGTACATCTGTGGCCTCATGTCCACCTTGGGATGGATGTTCA--CCTGGGGATTGGATATTCAGTAGGGGCCTGAGTGTCCACGTGGTTTGTGATGTCTACCTGGGGCCTGGTGTTCAT-CTGAGGTTTGATAGCCACCTGGGGCCTGGACATTTGCC-TGGAACCTGATGTACAGCTGGTGCCTGAAGTTCATCTATGCCTGGTGTCCCCCTGGGGCCAGGTAGTCAA-CACGGGGCCTGAAGACCTTCTAGAGTTCAGTGTTCACCTGTG--GCCTGAAGT-CCACCTAGGGCTTGGGTGTCCAAATAGGGCCTTCTGTCAGCTTGAGA-TTTGTGTATTTACCTAGGGCCTGGTTGTCCACTTGGGGCTTGA-TTTTTCACTTGGTTTTT---GTGTTAATTTGG----GGTCT-ATTGTCCACCTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132563912 533 + 247869975 GAGCCTGATGTCTATCTGGGGCCTTGTATTTACCTAGGACCAGTGCATCCACCGGGGGTCTGAGTGCCCTCATGGAGCCTGGAGTTTT-CCTGGGGCCTGGGGTCTGCCTTAGGCTTAA-GTGTACATCTGTGGCCTGATGTCCACCTTGGGATGGATGTCCA--CCTGGGGAC-GGATATTCAGTAGGGGCCTGAGTGTCCACCTGGTTTGTGATGTCTACCTGGGGCCTGGTGTTCAT-CTGAGGTTTGATATCCACCTGGGGCCTGGACATTTGCC-TGGAACCTGATGTACAGCTGGTGGCTGAAGTTCATCTATGCCTGGTGTCCCCCTGGGGCCAGGTAGTCAA-CACAGTGCTTGAAGACCTTCTAGAGTTCAGTGTTCACCTGTG--GCCTGAAGT-CCACCTAGGGCTTGGGTGTCCAAATAGGGCCTGGTGTCAGCTTGAGA-TTTGTGTATTTACCTAGGGCCTGGTTGTCCACTTGGGGCTTGATTTTTTTACTTGGTTTTT---GTTTTAATCTGG----GGTCT-AGTGTCCACCTGGG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 70634 532 + 95358 GGGCCTGATGTCTACCTGGGGCCTTGTATTTACCTAGGACCAGTGCATCCATCTGGGGTCTGAGTGCCCTCATGGAGCCTGGAGTTTT-CCTGGGGACTGGGGTCTGCCTTAGGCTTAA-GTGTACATCTGTGGCCTCGTATCCACCTTGGGACAGATGTCCA--CCTGGGGAC-GGATATTCAGTAGGGGCCTGAGTGTCCACCTGGTTTTTGATGTCTACCTGGGGCCTGGTGTTCAT-CTGAGGTGTGATATCCACCTGGGGCCTGGACATTTGCC-TGGAACCTGATGTACAGCTGGTGCCTGAAGTTCATCTATGCCTGGTGTCTCCCTGGGGCCAGGTAGTCAA-CACAGGGCCTGAAGACCTTCTAGAGTTCACTGTTCACCTGGG--GTCCGAAGT-CCACCTAGGGCTTGGGTGTCCAAATAGGGCCTGGTGTCAGCTTGAGA-TTTGTGTATTTACCTAGGGCCTGGTTGTCCACTTGGGGCTTGA-TTTTTTACTTGGTTTTT---GTGTTAATCTGG----GGTCT-AGTGTCCACCTGGG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 265968 531 + 1485088 GAGACTGATGTCTACCTGGGGCCTTGTATTTACCTAGGACCAATGCATCCACCTGGGGTCTGAGTGCCCTCATGGAGCCTGGAGTTTT-CCTGGGGCCTGGGGTC-ACCTTAGGCTTAA-GTGTACATCTGTGGCCTGATGTCCACCTTGGGATGGATGTCCA--CCTGGGGAC-GGATATTCAGTAGGGGCCTGAGTGTCCACCTGGTTTGTGATGTCTACCTGGGGCCTGGTGTTCAT-CTGAGGTTTGATATCCATCTGGGGCCTGGACATTTGCC-TGGAACCTGATGTAGAGCTGGTGCCTGAAGTTCATCTATGCCTGGTGTCCCCCTGGGGCCAGGTAGTCAA-CACGGGGCCTGAAGACCTTCTGGAGTTCAGTGTTCACCTGGG--GCCTGAAGT-CCACCTAGGGCTTGGGTGTCCAAATAGGGCCTGGTGTCAGCTTGAGA-TTTATGTATTTACCTAGGGCCTGGTTGTCCACTTGGGGCTTGA-TTTTTTAGTTGGTTTTT---GTGTTAATCTGG----GGTCT-AGTGTCCACCTGGG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 10647 477 + 30162 ------------------GGGCCTTGTATTTACCTAGGGCCTAAGCAACCACGTGGGGCCTGAGTGTCTTTATGGGCTCTAGAGTTCT-CCTGGAGCTTGGTGCCTGCCTGGGGCTTCG-GTGTACATCTGTGACCTGATATCCACCTTGGGATGGATGTGCA--CCTGGGCAC-AGATGTCCA-TGTGGGActgagtgttcgcctggttcctgatgtccacctggggcctggtgttcac-ctgAAGCTTGATACCCACCTGGGGCATGGACATTTGCC-AAAAATCTGACGTTCAGCTGTGGCCTGAAGTTTACATATGCCTGATGTCCACCTAGGGTTCAGAGTTCAT-C-TGGG--------------------------------------GCTTGATGC-CCACCTGGGGCCTGGGTTTCCACATAGAGCCTGGCATTGACTTGGGATCAAGG-TATTTACCTAGGGCCTGGGTGTCCACTTGGGGCCTGA--CTTCCACTTGGTTCTT------GGTGTCAGGCAGAGGCCTGACTGTTCACTTGGG i macFas5.chr9_KE145707_random I 18 C 0 s cerAty1.NW_012003779v1 33752 506 - 323133 ------------------GGGCCTTGTATTACACTAGGACCAATGCATCCACCT-GGGCTCGAGTGTCCTCATGGGGCCTGGAGTTTTCCCTGGGGCCTGGTGTCTGCCTTAGGCCTAACGTGTACATCCATGGCCTGATGTCCACCTTGGGATGGATGTCCACCCCTGGGGAT-GGATATTCAGTAGGGGCCTGAGTGTCCACCTGGTGCGTGATGTTC-CCTGGGCCCT-GTGTTCATGCTGAGGCTTGATATCCACCTGGGGCCTGGACATTTGCCTGGAAACCTGATGTACAGCTGGTGCCTGAA-TTCATCTATGCC-GGTGTCC-CCTGGGGTCAGTAGTCCAC-C-CGGGGCCTGAAGTCCTCCTAGA--TCAGCTGTTCCCTGGGCTGCTTAAAGCTCCACCTAGGTCTTGGGAGTCCAAATAG-GCCTGGTGTCAGCTTGAGA-CTTGT-AATTTAGCACGGGCCT-GGTGTCCACTT-GGGCTTGA--CTTTTACTTGTTTTGT------GTAATCTGG----GGTCT-AGTATCCACCTGGG i cerAty1.NW_012003779v1 I 29 I 53 s chlSab2.chrUn_KE147573v1 15799 498 + 85383 ------------------GGGCCTTGTATTTATCTAGGACCAATATGTCCAGTTGGGGTCTGAGTGTCCTCATGGGTCCTGGAGATTC-CCTGGGGTCTGGTGTCTGCCTTAGGCCTAA-GTGTACATCCATGGCCTGATGTCCA--------------------CCTGGGGAT-GGATATTCAGTAGGGGCCTGAGTGTCCACCTGGTGCGTGATGTCTCCCTGGGGCCTGGTGTTCAT-CTGAGGCTTGATATCCACCTGGGGCCTGGACATTTGCC-TGGAACCTGATGTATAGCTGGTGCCTGAAGTTCATCTATGCCTGGTGTCCCCCTGGGGACAGGTAGTCAA-C-TGGGGCCTGAAGTCCTCCTAGAGTTCAGTGTTCACCTGGG--GCTTAAAGT-CCACCAAGGGCTTGGGAGTCCAAATAGGGCCTGGTGTCAGCTTGAGA-CTTGTATATGTAGCTGGGGCTTGTTTGTCCATTTGGAGCCTGA-TTTTTTACTTGTTTTTTTTTTTGTTAATCTGG----GGTCT-AGTGTCCACCTGGG i chlSab2.chrUn_KE147573v1 I 18 C 0 s colAng1.NW_012118199v1 545829 513 - 854822 ------------------GGGCCTTGTATTTGTCTAGAACCAATATGTCCATCTGGGGTCTGAGTGTCCTCATGGGGCCTGGAGATTT-CCTGGGGTCTGGTGTCTGCCTTAGGCCTAA-GTTTACATCCGTGGCCTGATGTCCACCTTGGGATGGATGTCCA--CCTGGGGAT-GGATATTCAGTAGGGTCCTGAGTGTCCACCTGGTGCGTGATGTCTCCCTGGGGCCTGGTGTTCAT-CTGAGGCTTGATATCCACCTGGGGCCTGGACATTTGCC-TGGAACCTGATGTATAGCTGGTGCCTGAAGTTCATCTATGCCTGGTGTCCCCCTGGGGTCAGGTAGTCAA-C-CGGGGCCTGAAGTCCCCCTAGAGTTCAGTGTTCACCTGGG--GCTTAAAGT-CCACCCAGGGCTTGGGAGTCCAAATAGGCCCTGGTGTCAGCTTGAGA-CTTGTATAGATAGCTGGGGCCTGGTTGTCCATTTGTGGCCTGA-TTTTTTACTTGGTTTTT---GTGTTAATCTGG----GGTCT-AGTGTCCAGCTGGG i colAng1.NW_012118199v1 I 18 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=104719.000000 s hg38.chr9_KI270719v1_random 95808 60 + 176845 GCCTGGGT---ATCCACCTAGGGACTATTGTCCAGCTGGAGACTAATGACTAACTATGGCCTG s panTro5.chr20 31455176 60 + 66533130 GTCTAGGT---ATCCACCTAGGGACTATTGTCCAGCTGGAGACTAATGACTACCTATGACCTG i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132564445 60 + 247869975 GCCTAGGT---ATCCACCTAGGGACTATTGTCCAGCTGGAGACTAATGACTACCTATGGCCTG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 71166 60 + 95358 GCCTGGGT---ATCCACCTAGGGACTATTGTCCAGCTGGAGACTAATGACTACCTATGGCCTG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 266499 60 + 1485088 GCCTAGGT---ATCCATCTAGGGACTACTGTCCAGCTGGAGACTAATGACTACCTATGGCCTG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 11124 55 + 30162 TCCTAGATAAGATCCATAT---GACTGATGTCCATGTGGGGCCTGAGAACCACTTGAG----- i macFas5.chr9_KE145707_random C 0 C 0 s chlSab2.chrUn_KE147573v1 16297 60 + 85383 GCCTAGGC---ATCCACCTGGGGACTGTTCTACAGCTGGAAACTGCTGACTACCTGTGGCCTG i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 546342 60 - 854822 GCCTAGGT---ATCCACCTGGGGACTGTTCTACAGCTGGAAACTACTGACTACCTGTGGCCTG i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I e cerAty1.NW_012003779v1 34258 53 - 323133 I a score=1474924.000000 s hg38.chr9_KI270719v1_random 95868 657 + 176845 GTAATCACCTAAGGCTTTGT-TTCACTTAGGTACTTGGTGCCAA-ACTGTT-GCCTGCTGTTCACCTGGGGTATGG-------------------TGTCCACCTGGGGTCTG---GATGTCAGCCTGGGGCTTGTTGTATACATGTATCTTAGATATCCAGATAAGGGTCTGTTTTCTGCTT-AGGTGCAGCAGTCCATCTGGTGCTTGAGT-GTCAACCTAAGGCCTGATGTCTATGTTGGACCTTGGGTTCACCTGAGGCCTGATATCCACCTGGGGCCTCAATGTCCAAATGGGGCCTGATGCCCATCTGGGTCCTGGGTGTCCACCTGCAGCATGGATGTCCACTGGTACTTTATGTCCACCAGGGGCCTAATGTCCACCTAAGACCTGGTGTTCACCTGGGGTCTG-ATGTTCAGCTGAAGACAGGATGTCCACCTGGAGCTGAGGAATCCACCCAGGGACTGGTGTTGAACTGGGGCCTGATGACCACCCGGGGACAAGGTA--CACATCAGGCTTGTTGTCCACCTG----TCACCA-GATGTCCACCTGAGTCCTGATGTCCATCTTGATCCTGTTTGTCCACATTAGGCCTGATGTCCAGCTGGGGCCTAGGTACCCACT-GGGGGCTTCCTGTTAACCTGGGGACTGGTGTCATTCTGGGGCCTAATGACCACCTGGGTTGTA s panTro5.chr20 31455236 657 + 66533130 GTAATCACCTAAGGCTTTGT-TTCACTTAGGTACTTGGTGCCAA-ACTGTT-GCCTGCTGTTCACCTGGGGTATGG-------------------TGTCCGCCTGGGGTCTG---GATGTCAGCCTGGGGCTTGTTGTATACCTGTATCTTAGATATCCGGATAGGGGTCTATTTTCTGCTT-AGGTGCAGCAGTCCATCTGGTGCTTGAGT-GTCAACCTAAGGCCTGATGTCTATGTTGGACCTAGGGTTCACCTGAGGCCTGATATCCACCTGGGGCCTCAATGTCCACATGGGGCCTGATGCCCATCTGGGCCCTTGATGTCCACCTGCAGCATGGATGTCCACTGGTACTTTATGTCCACCAGGGGCCTAATGTCCACCTAAAACCTGGTGTTCACTTGGGGTCTG-ATGTTCAGCTGAAGACCGGATGTCCACCTGGAGCCGAGGAATCCACCCAGGGACTGGTGTTGAACTGGGGCCTGATGACCACCTGGGGACAAGGTA--CACATCAGCCTTGATGTCCACCTG----TCACCA-GATGTCCACCTGAGTCCTGATGTCCATCTTGATCCTGGGTGTCCACATTAGGCCTGATGTCCAGCTGGCACCTAGGTACCCACT-GGGGGCTTCCTGTTAACCTGGGGACTGGTGTCATTCTGGGGCCTAATGACCACCTGGGTTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132564505 677 + 247869975 GTAATCACCTAAGGCTTTGT-TTCACTTAGGTACTTGGTGCCAA-ACTGTT-GCCTGCTGTTCACCTGGGGTATGGTGTCCACCT-GGGGCATATTGTCCACCTGGGGTCTG---GATGTCAGCCTGGGGCTTGTTGTACACCTGTATCTTAGATATCTAGATAGGGGTCTGTTTTCTGCTT-AGGTGCAGCAGTCCACCTGGTGCTTGAGT-GTCAACCTACGGCCTGATGTCTATGTTGGACCTAGGGTTCACCTGAGGCCTGATATCCACCTGGGGCCTCAATGTCCAAATGGAGCCTGATGCCCATCTGGGCCCTGGGTGTCCACCTGTGGCATGGATGTCCATTGGCACTTTATGTCCACCAGGGGCCTAATGTCCACCTAAGACGTGGTGTTCACCTGGGGTCTG-ATGTTCAGCTGAAGACTGGATGTCCACCTGGAGCTGAGGAATCCACCCAGGGACTGGTGTTGAACTGGGGCCTGATGACCACCGGGGGACAAGGTATCCACACCAGGCTTGATGTCCACCTG----TCACCA-GATGTCTACGTGAGTCCTGATGTCCATCTTGATCCTGGGTGTCCACATTAGGCCTGATGTCCAACTGGGGCCTCGGTACCCACT-GGGGGCTTCCTGTTAACCTGGGGACTGGTGTCAATCTGGGGCCTAATGACCACCTGGGTTGTA i panPan2.chr2B C 0 M 859 s gorGor5.CYUI01000801v1 71226 657 + 95358 GTAATCACCTAAGGCTTTGT-TTCACTTAGGTACTTGGTGCCAA-ACTGTT-GCCTGCTGTTCACCTGGGGTATGG-------------------TGTCCACCTGGGGTCTG---GATGTCAGCCTGGGGCTTGTTGTATACATGTGTCTTAGATATCCAGATAACGGTCTGTTTTCTGCTT-AGGTGCAGCAGTCCATCTGGTGCTTGAGT-GTCAACCTAAGGCCTGATGTCTATGTTGGACCTAGGGTTCACCTGAGGCCTGATATCCACCTGGGGCCTCAATGTCCAAATGGGGCCTGATGCCCATCTGGGCCCTGGGTGTCCACCTGCAGCATGGATGTCCACTGGTACTTTATGTCCACCAGGGGCCTAATGTCCACCTAAGACCTAGTGTTCACCTGGGGTCTG-ATGTTCAGCTGAAGACCGGATGTCCACCTGGAGCCGAGGAATCCACTCAGGGACTGGTGTTGAACTGGGGCCTGATGACCACCCGGGGACAAGGTA--CACACCAGGCTTGTTGTCCACCTG----TCACCA-GATGTCCACCTGAGTCCTGATGTCCATCTTGATCCTGTTTGTCCACATTAGGCCTGATGTCCAGCTGGGGCCTAGGTACCCACT-GGGGGCTTCCTGTTAACCTGGGGACTGGTGTCATTCTGGGGCCTAATGACCACCTGGGTTGTA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 266559 677 + 1485088 GTAATCACCTAAGGCTTTGT-TTCACTTAGGTACTTGGTGCCAA-ACTGTT-GCCTGCTGTTCACCTGGGGTATGGTGTCCACCT-GGGACATATTGTCCACCTGGGGTCTG---GATGTCAGCCTGGGGCTTGTCGTACACCTGTATCTTAGATATCCAGATAGGGGTCTGTTTTCTGCTT-AGGTGCTGCAGTCCACCTGGTGCTTGAGT-GTCAACCTAAGGCCTGATGTCTATGTTGGACCTCGGGTTCACCTGAGGCCTGATATCCACCTGGGGCCTCAATGTCCAAATGGGGCCTGATGCCCATCTGGGCCCTGGGTGTCCACCTGCAGCATGGATGTCCACTGGTACTTTATGTTCACCAGGGGCCTAACGTCCACCTAAGACCTGTTGTTCACCTGGGGTCTG-ATGTTCAGCTGAAGACTGGATGTCCACTTGGAGCCGAGGAATCCACCCAGGGACTGGTGTTGAACTGGGGCCTGATGACCACCAGGGGACAAGGTATCCACACCAGGCTTGATGTCCACCTG----TCACCA-GATGTCCACCTGAGTCCTGATGTCTATCTTGAACCTGGGTGTCCACATTAAGCCTGATGTCTAGCTGGGGCCTAGGTACCCACT-GGGGGCTTCCTGTTAACCTGGGGACTGGTGTCAATCTGGGGCCTAATGACCACCTGGGTTGTA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 11179 479 + 30162 ----------------------------------------------------GCCTGCCATTAACCT-------------------AGGGCATATTGTCCACCTGGGGTCTG--------------GGAG-------TCAAACT--------------------GGAATGTGATGTCCACCTGGGGTGTGGAGGTCACCCTGGGTCCTGATTCACTTTTCCA--GTCCAGTGTCCAACAGAAGCCTGGTGTAAACCTGGAACCTGATGTCCACCTGTGGCCA-GATGACCACCTTGAGTGGGATGTTCATCAAGAGACTAGGTATCCAC------------------ATGGGACCTGGGGTCCACCTGGGGCCTGATGTCTACCTTAGGCCTGGCA-TTACCTGGGGTCTGTGTGTACATCTG--------------------------------------GGGCCTGATGTTCAGCTGGGCCCT--------------------------------GGTTT-----CCACCTACAGTTCACCA-----TCTAACTCAGGCCTGATGTCCACTCTGGACCTAGGTATCCATCTGAGGCCTGGTCTTTACCTGGGGCGTGGGAGTCCACCTGGGGGCTCTGTGTCCTTTTGGATTCTGATGTCCACCTGGGGCCTGATGATTACCTGAGGCTTC i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 34311 656 - 323133 GTAGTCACCTAAGGC-TTGTGGTTACTTAGGTACTTGGTGCCAACACTGTTTGCCTGCTGTTCACCTGGGGTAT-GAGTCCACCTGGGGGCATATCGTCCACCTGGGGCCTGACTGAT--CAGTCTGGGGCTTGT--TTAACCTGTATC-TAGATATCAGATGGGGGGTGTGTTCTCTGCTT-GGCTGCAGCAGTCCACCTGGG--CTGAGTCGTCAACCTAAGGCCTGATGTCTATGTGGAACCTGAGGTTCACCTAG-GCCTGATATCCACCT-TGGCCT-AATATCCAAATGGGGCTCGATGTCCATCTGGGCCCTGAATGTCCACCTGTGG-ATGGATGTCCACTGGTACCTGATGTCCACCAGGGGCCTAATGTCCACCTAAGACCTGGTGCTCACCTGGAGTCTG-ATGTTCAGCTGAAGACTAGATTTCCACCTGGAGCCA------------AGGGACTGGTGTTGAACTGAGGCCTCTTGACCACTGGGGGACAA-GTATCCACACCAGGCTTGACG-TCACCTG----TGACCAGAGTGTCCACCTGAGTCCTGATGTCCATCTTGATCCTGGGTGACCACATTAGGCCTGATGTCCAGCT-GGGCCTAGGTACCCACT--GGGGCTTCCTGTTAACCTGGGGACTGGTATCCATTCTAGGTCTAATGACCA-CTGGGTTGTC i cerAty1.NW_012003779v1 I 53 C 0 s chlSab2.chrUn_KE147573v1 16357 659 + 85383 GTAATCACCTAAGGCTTTGTGTTGACTTAGGTACTTGGTGCCAA-ACTGTT-GACTGCTGTTCACCTGGGGTATGGAGTCCACCT-GGGGAATATTGTTCCCCTGGGGCCTG---GATGCCAGTCTGGGGCTTGTTGTACACCTGTATCTTAGATCTCCAGATGGGGGTGTCTTTTCTGCTT-GGCTGCAGCAGTCCACTTGGGGTTTGAGT-GTCAACCTAAGGCCTGATGTCTATGTGGAACCTAGGGTTCACCTGAGACCTGATATCCACCTGTGGCCTCAATGTCCAAATGGGGCCTGATGCCCATCTGGACCCTGAGTGTCCACCTGTGGCATGGATGTCCACTGGTACCTGATGTCCACCAGGAGACTAATGTCCACCTAAGACCTGGTGTTCACCTGGGGTCTG-ATGTTCAGCTGAAGACTAGATTTCCACCTGGAGCCAAGGTATCCACCCAGGGACTGGTGTTGAACTGAGGCCTCTCGACCACCGGGGGACAAGGTATCCACACTAGGCTTGATGTCCACCTG----TGACCA-------------------GATGTCCATCTTGATCCTGGGTGACCACATTAGGCCTGATGTCCAGCTGGGGCCTAGGTGCCCACT-GGGGGCTTCCTGTTAACCTGGGGACTGGTATCCATCTGGGTCCTAATGACCA-CTGGGTTGTA i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 546402 677 - 854822 GTAATCACCTACGGCTTTGTGTTGACTTAGGTACTTGGTGCCAA-ACTGTT-GCCTGCTGTTCACCTGGGGTATGGAGTCCACCT-GGGGTATATTGTCCACCTGGGGCCTG---GATGTCAATCTGGGGCTTGTTGTACACCTGTATCTTAGATTTCCAGATGGGGGTGTGTTTTCTGCTT-GGCTGTAGCGGTCCACCTGGGGCTTGAGT-GTCAACCTAAGGCCTGATGTTTATGTGGGACCTAGGGTTCACCTGAGGCTTGATATCCACCTGGGGCCTCAATGTCCAAATGGGGCCTGATGCCCATCTGGGCCCTGAGTGTCCACCTGTGGCATGGATGTCCACTGGTACCTGATGTCCACCAGGAGCCTAATGTCCACCTAAGACCTGGTGTTCACCTGGGGTCTG-ATGTTCAGCTGAAGACTGGATTTCCACCTGGAGCCAAGGTATCCACCCAGGGACTGGTGTTGAACTGAGGCCTCTTGGCCACTGGAGAACAAGGTATCCACACCAGGCTTGACGTCCACCTG----TGACCA-GATGTCCACCTGAGTCCTGATGTTCATCTTGATCCTAGATGACCACATTAGACCTGATGTCCAGCTGGGGCCTAGGTACCCACT-GGGGGCTTCCTGTTAACCTGGGGACTGGTATCCATCTGGGTCCTAACGACCA-CTGGGTTGTA i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=14508.000000 s hg38.chr9_KI270719v1_random 96525 10 + 176845 T-TATTCACCT s panTro5.chr20 31455893 10 + 66533130 T-TATTCACCT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000801v1 71883 10 + 95358 T-TATTCACCT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 267236 10 + 1485088 T-TATTCACCC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 11658 10 + 30162 A-TGTTCACCT i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 34967 10 - 323133 ATTATTCACT- i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 17016 10 + 85383 T-TATTCACCT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 547079 10 - 854822 T-TATTCACCT i colAng1.NW_012118199v1 C 0 C 0 e panPan2.chr2B 132565182 859 + 247869975 M e ponAbe2.chrUn 60074448 0 - 72422247 I a score=4245.000000 s hg38.chr9_KI270719v1_random 96535 4 + 176845 AGGG s panTro5.chr20 31455903 4 + 66533130 AGGG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000801v1 71893 4 + 95358 AGGG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 267246 4 + 1485088 AAGG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012003779v1 34977 3 - 323133 AGG- i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 17026 4 + 85383 AGGG i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 547089 4 - 854822 AGGG i colAng1.NW_012118199v1 C 0 C 0 e panPan2.chr2B 132565182 859 + 247869975 M e ponAbe2.chrUn 60074448 0 - 72422247 I e macFas5.chr9_KE145707_random 11668 0 + 30162 C a score=295544.000000 s hg38.chr9_KI270719v1_random 96539 142 + 176845 CCTGGTGTCCATTTGGGGCTTGAGTG-TAACCTTGGACCT-GGCACCCACATAGGA-TTGGGTATCAAACTGGCCCCTTGGTGTCCAGTTAAGACATCATGTGAACCTGGCGCCTGAGTGTCCACATGGGTCCAAATGACTACTG s panTro5.chr20 31455907 143 + 66533130 CCTGGTGTCCAGTTGGGGCTTGAGTG-TAACCTTGGACCT-GGCACCCACACAGGACTTGAGTATCAAACTGGCCTCTTGGTGTCCAGTTAAGACATCATGTGAACCTGGCGCCTGAGTGTCCACATGGGGCCAAATGACTACTA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000801v1 71897 142 + 95358 CCTGGTGTCCACTTGGGGCTTGAGTG-TAACCTTGGACCT-GGCATCCACATAGGG-TTGGGTATCAAACTGGCCCCTTGGTGTCCAGTTAAGACATCATGTGAACCTGGCGCCTGAGTGTCCACTTGGGGCCAAATGACTACTG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 267250 143 + 1485088 CCTGGTGTCCACTTGGGGCTTGAGTG-TAACTTTTGACCT-GGCACCCACATAGGACTTGGGTATCAAACTGGCCCCTTGGTGTCCAGTTAAGACATCATGTGAACCTGGTGCCTGAGTGTCCACATGGGGCCAAATGACTACTG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 9940 143 - 30162 TGTGGTGTTCACTTAGGGCTTGAGTGCCAGCCTTGGACCT-GGTGTCCACCTGGGACTTGGGTATCAAACCAG-GAGTTGGTGTCCAGTTGAGACATCAGGTGCACCTGAGGTCTGAGTGTTCGCATGAGGCCAGATGACCACTG i macFas5.chr9_KE145707_random n 0 I 778 s cerAty1.NW_012003779v1 34980 142 - 323133 CCTGGTGTCCACTTGGGGCTTGAGTG-TAACCTTGGACCT-GGCACTCACCTAGGACTTGGGTATCAAACTGGCCCCTTGGTGTCCATTTGAGACATCATGTA-ACCTGGCATCTGAGTGTCCACACGGGACCAAATGACTACTG i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 17030 144 + 85383 CCTGGTGTCCACTTGGGGCCCGAGTG-TAACCTTGGACCTGGGCACCCACCTAGGACTTGGGTGTCAAACTGGCCCCTTGGTGTGCAGTTAAGACATCATGTGAACCTGGCCCCTGAGTGTATACATGGGGCCAAATGACTACTG i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 547093 143 - 854822 CCTGGTGTCCACTTGGGGCCCGAGTG-TAAACTTGGACCT-GGCACCCACCTAGGATGTGGGTGTCAAACTGGCCCCTTGGTGTGCAGTTAAGACATCATGTGAACCTGGCCTCTGAGTGTATACATGGGGCCAAATGACTACTG i colAng1.NW_012118199v1 C 0 C 0 e panPan2.chr2B 132565182 859 + 247869975 M e ponAbe2.chrUn 60074448 0 - 72422247 I a score=1177098.000000 s hg38.chr9_KI270719v1_random 96681 646 + 176845 GGGGCCTGAATGTCAACCTAGAATC-----------TGAGGTTTA--------CTAGGGGCCTAGGTATCCACCTGGGGCCCAATGTCCACCT------------------GAGCCTGGGTGTCAACCTGGGGCCTGATGTAAACCTCTAGTTCACTATCCACCTTGGGCTTAATGTCAACCTGGAG-------------------CCCGATGTCCACCT-GAGTACTGATGTTCACCT------------TTGACCTGATGTCCACCTGTGGACTGTTTATCCACCCATGGCCTGATGTTCACCTGGGGCTGAATGTCCAACTGTGACCTGTTGTGCACCTGGAACCTAGGCATCCACCTGCAGCCTGATGTTCAGCTGGGCTGGGACCTGGAGTTCA-CCTGAGGCATGATGTCCACC-------------------TGAAGCTTGATGTTCACCTGGGGGCTGGGTGTCCACTTGGGGCCCAATATCCACCTGGAG-ACTA-----------------------------------GGTACCCACCTGGGATCTGGTGTT-CACTCAAGATTG-GTGTTCAGCTGTGGCCTAATGACCACCTGGGTCACGGTGTCTACCTTGGACTGGGTGCTCAC-------CTGGAGCC-AGTGTTCACT-GGGGGCCTAGTGTGCACCT-GAGACTGGGGGATGCACCTGGGGCCTGGTGTCTACCTGGTGCCTAGGTATCCACTTGGGGCCTAATGTTCATCTGGAATCTGATATCCACCTGGGGC s panTro5.chr20 31456050 646 + 66533130 GGGGCCTGAATGTCAACCTAGAATC-----------TGAGGTTTA--------CTAGGGCCCTAGGTATCCACCTGGGGCCTAATGTCCACCT------------------GAGCCTGGGTGTCAACCTGGGGCCTGAAGTAAACCTCTAGTTCAGTGTCCACCTTGGGCTTGATGTCAACCTGGAG-------------------CCTGATGTCCACCT-GAGTACTGATGTTCACCT------------TTGACTTGATGTCTGCCTGTGGACTGTTTATCCACCCATGGCCTGATGTTCACCTGGGACTGAATGTCCAACTGTGACCTGTTGTGCACCTGGAACCTGGGCATCCACCTGCAGCCTGATGTTCAGCTGGGCTGGGACCTGGAGTTCA-CCTGAGGCATGATGTCCACC-------------------TGAAGCCTGATGTTCATCTGGGGGCTGGGTGTCCACTTGGGGCCCAATATCCACCTGGAG-ACTA-----------------------------------GGTACCCACCTGGGATCTGGTGTT-CACTCAAGATTG-GTGTTCAGCTGTGGCCTAATGACCACCTGGGTCATGGTGTCTACCTTGGACTGGGTGCTCAC-------CTGGAGCC-AGTGTTCACT-GGGGACCTAGTGTGCACCT-GAGACTAGGGGATGCACCTGGGGCCTCGTGTCTACCTGGTGCCTAGGTATCCACTTGGGGACTAATGTTCATCTGGAATCTGACATCCACCTGGGGC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000801v1 72039 644 + 95358 GGGGCCTGAATGTCAACCTAGAATC-----------TGAGGTTTA--------CTAGGGGCCTAGGTATCCACCTGGGGCCTAATGTCCACCT------------------GAGCCTGGGTGTCAACCTGGGGCCTGATGTAAACCTCTAGTTCAGTGTCCACCTTGGGCTTGATGTCAACCTGGAG-------------------TCTGATGTCCACCT-GAGTACTGATGTTCACCT------------TTGACCTGATGTCCACCTGTGGACTGTTTATCCACCCATGGCCTGATGTTCACCTGGGGCTGAATGTCCAACTGTGACCTGTTGTGTACCTGGAACCTAGGCATCCACCTGCAGCCTGATGTTCAGCTGGGCTGGGACCCAGAGTTCA-CCTGAGGCATGATGTCCACA-------------------TGAAGCTTGATGTTCACCTGGGGGCTGGGTGTCCACTTGGGGCCCAATATCCACCTG--G-ACTA-----------------------------------GGTACCCACCTGGGATCCGGTGTT-CACTTAAGATTG-GTGTTCAGCTGTGACCTAATGACCACCTGGGTCACGGTGTCTACCTTGGACTGGGTGCTCAC-------CTGGAGCC-AGTGTTCACT-GGGGGCCTAGTGTGCACCT-GAGACTGGGGGATGCACCTGGGGCCTGGTGTCTACCTGGTGCCTAGGTATCCATTTGGGGCCTAATGTTCATCTGGAATCTGATATCCACCTGGGGC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 267393 646 + 1485088 GGGGCCTGAATGTCAACCTAGAATC-----------TGAGGTTTA--------CTAGGGGCCTATGTATCCACCTGGGGCCTAATGTCCACCT------------------GAGCCTGGGTGTCAACCTGGGGCCTGATGTAAACCTCTAGTTCAGTGTCCACCTTGGGCTTGATGTCAACCTGGAG-------------------CCTGATGTCCACCT-GAGTACTGATGTTCACCT------------TTGACCTGATGTCCACCTGTGGACTGTTTATCCACCCATGGCCTGATGTTCACCTGGGGCTGAATGTCCAACTGTGACCTGTTGTGCACCTGGAACCTAGGCATCCACCTGCAGCCTGATGTTCAGCTGGGCTGGGACCCGGAGTTCA-CCTGAGGCATGATGTCCACC-------------------TGAAGCTTGATGTTCATCTGGGGGCTGAGTGTCCACCTGGGGCCCGATATCCACCTGGAG-ACTA-----------------------------------GGTACCCACCTGGGATCTGGTGTT-CACTCGAGATTG-GTGTTCAACTGTGGCCTAATGACCACCTGAGTCATGGTGTCTACCTTGGACTGGGTGCTCAC-------CTGGAGCC-AGTGTTCACC-AGGGGCCTAGTGTGCACCT-GAGACTGGGGGATGCACCTGGGGTCTCGTGTCTACCTGGTGCCTAGGTATCCACTTGAGGCCTAATGTTCATCTGGAATCTGATATCCACCTGGGGC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 11668 728 + 30162 GGGGCCTGAGTGTCCACCTGGAGGCAAATATGCACATAAGGCCTGGCATCCTCCTA-GGGCCT-TATATTCACCTGTGTCCTGGTGTCCGTCTG-----------------GGGCCTGGGTGTCAAACAGGGG-TTAATATACACCTGGAGCGCAGTATCCACCTGGAGCCTGATATCCCCCTGAGGCCTTGGCGTGCATTTGGCACCTGGTGTCCATCTGCAGCACAGGTGTCCATCTGGTGCTTGGGTGTTCACCCCATGTTCATCAGGGGCCTAGGTATCCATTTGGGGCCTGGTGTCCACCTGGGGCCTGAAGTTCATCTGGAACCTGGTATTCACCTAGGGCATGGGTATCCACCTGGATCCTGATGTTCAGATA----GGGA-CTGGGTATAGACCTGGGACCTCATATCCACCTTGGGTATAGGCATCCACGTGGAGCCTGATATCCGCCTAGTGCCTGTGTGTCAGCCTAGAGCCTGATGCCCACCCGGGA-ACTAGGTACACAGCTGGCTTTTTTGTTCACTTGAGGCCTGGTGTCCACTTGGGAACTGATGTCGAACTGGGGATTAGGTATCCACCTGAAGACTGGTGTCCAGCTGGGGC------TTTA---TAAA---------TCC-------CTGGGGCATGTTGTTCACC--TGGGCTTGATATATACCT-AAGACCTGGGAATCCAACTGAGG-CTGATGTCCAGTTAGAGCCTAGGTATCTACTTAGGGTCTCATATCCATCTGGAGCCTAATGTCCACCTGGGGA i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 35122 642 - 323133 GGTGCCTGAATGTCAACCTAGAATC-----------TGAGGTTTA--------CTA-GGGCCTAGGTATCCACCTG-GGCCTGGTTTCTACCT------------------GAGCCTGGGTGTCAACCTGGGG-CTGATGTAAACCTCTAGTTCAGTGTCCACCTTGGGCTTGATGTCAACCTGGAG-------------------CCTGATATCCACC--CAATACTGATGTTCACCT------------TTGACCTGATGTGCACCTGAGGACTGTTTATCCACCCATGGCCTGATGTTCACCTGGGGCTGAATGTCCAACTGTGACCAGATGTGCACCTGGAAC-CAGGCATCCACGTGGGGCCTGATGTTCAGCTC-GCTGAGA-CTGGAGTTCA--CTGAGGCATGATGTCCACC-------------------TGAAGCTTGATGTTCATCTGG-GCCTG-GTGTCCACCTGGGGCCCAACATCCACCTGGGAGACTAA----------------------------------GGTACCCACCTGGGATCTGGTGTT-CACTCAAGATTGTGCTTCCAGCTGTGGCCTAATGACCACCTGGGTCATGGGGTCTACCTTAGACTGGGTGCTTAC-------CTGGAGCCTTGTGATCACCAGGGGGTCTAGTGTGCACCTGAAGGCTGGGGGGTGCACCTAGGGCCTGGTGTCTACCTGGCACCTAGGTATCCACTTGGGGCCTAATATTAATCTGGAATCTGATATCCACCTGGGGC i cerAty1.NW_012003779v1 C 0 I 19 s chlSab2.chrUn_KE147573v1 17174 657 + 85383 GGGGCCTGAATGTCAACCTAGAATC-----------TGAGGTTTA--------CTAGGGGCCTAGGTATCCACCTGGGTCCTGGTTTCTTCCTGGGGCCTAATGTTCACCTGAGCCTGGGTGTCAACCTGGGGCCTGATGTAAACCTCTAGTCCAGTGTCCACCTTGGGCTTGATGTCAACCTGGAG-------------------CCTGATGTCCACCT-GAGGACTGATGTTCACCT------------TTGACCTGATGTCCACCTGCAGACTGTTTATCCACCCATGGCGTGATGTTCACCTGGGGCCAAATGTCCAACTGTGACCAGATGTGCACCTGGAACCTAGGCATCCACATGGGGCCTGATGTTCAGCTGGGCTGGGACCTGGAGTTCA-CCTGAGGCATGATGTCCACC-------------------TGAAGCTTGATGTTCATCAGGGGGCTGGGTGTCCACCTGGGGACTGATATCCACCTGGAG-ACTA-----------------------------------GGTACCCACCTGGGATCTGGTGTT-CACTCGAGATTG-GTGTTCAGCTGTGGCCTAATGTCCACCTGGGTCATGGTGTCTACCTTGGACTAGGTGCTTACCTGGAAGCTGGAAGCTGGTGTTCACT-GGGGGCCTAGTGTGCACCTGAAGGCTGGGGGGTGCACCTAGGGCCTGGTGTCTACCTGG----------------TGGAGCCTAATATTCATCTGGAATCTGATATCTACCTGGGGC i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 547236 612 - 854822 GGGGCCTGAATGTCAACCTAGAATC-----------TGAGGTTTA--------CTAGGGGCCTAGGTATCCACCTGGGGCCTGGTTTCTTCCTG-----------------GGGCCT-------------------------------------AATGTTCACCTGAGCCTGGGTGTCAACCTGGGG-------------------CCTGATGTCCacct-gaggactgatgttcacct------------ttgacctgatgtccacttgcagactgtttatccactcatggcGTGATGTTCACCTGGGGCCAAATGTCCAACTGTGACCAGATGTGCACCTGGAACCTAGGCATCCACATGGGGCCTGATATTCAGCTGGGCTGGGACCTGGAGTTCA-CCTGAGGCATGATGTCCACC-------------------TGAAGCTTGATGTTCATCTGGGGGCTGGGTGTCCACCTGGGGCCCGATATCCACCTGGAG-ACTA-----------------------------------GGTACCCACCTGGGATCTGGTGTT-CACTCGAGATTG-GTGTTCAGCTGTGGCCTAATGACCACCTGGGTCATGGTGTCTACCTTGGACTGGGTGCTCAC-------CTGGAAGCTGGTGTTCACC-GGGGGCCTAGTGTGCACCTGAAGCCTGGGGGATGCACCTAGGGCCTGGTGTCTACCTGGTGTCTAGGTATCCACTTGGAGCCTAATATTCATCTGGAATCTGATATCTACCTGGGGC i colAng1.NW_012118199v1 C 0 C 0 e panPan2.chr2B 132565182 859 + 247869975 M e ponAbe2.chrUn 60074448 0 - 72422247 I a score=2100.000000 s hg38.chr9_KI270719v1_random 97327 1 + 176845 C s panTro5.chr20 31456696 1 + 66533130 C i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000801v1 72683 1 + 95358 C i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 268039 1 + 1485088 C i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 12396 1 + 30162 C i macFas5.chr9_KE145707_random C 0 C 0 s chlSab2.chrUn_KE147573v1 17831 1 + 85383 C i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 547848 1 - 854822 C i colAng1.NW_012118199v1 C 0 C 0 e panPan2.chr2B 132565182 859 + 247869975 M e ponAbe2.chrUn 60074448 0 - 72422247 I e cerAty1.NW_012003779v1 35764 19 - 323133 I a score=497029.000000 s hg38.chr9_KI270719v1_random 97328 233 + 176845 TTGTAATTACCTGGGTTC-TGGGCATCCACCTAGGGCTTGAGTATCCTCCTGGGGCC-TTGAGTTTTACTAGGGACTCGTGTCTGCCTTGGACCTGGGTGTATATCTGTTGCCTAATGTACACCTTGAGAGTGATGTCAACCTGGGGACAGATGTCCTCTTGGGGTCTGAGTGTACACCTGGTGTCTGATGTCTGCCTGGGGACTTGTGTTCACCTTAGACCTGATATTCACCTG s panTro5.chr20 31456697 233 + 66533130 TTGTAATTACCTGGGGTC-TGGGCATCCACCTAGGGCTTAAGTATCCTCCTGGGGCC-TTGAGTTTTACTGGGGACTCGTGTCTGCCTTGGACCTGGGTGTACATCTGTGGCCTAGTGTACACCTTGAGAGTGATGTCAACCTGGGGACAGATGTCCTCTTGGGGTCTGAGTGTGCACCTGGTGCCTGATGTCTGCCTGGGGACTTGTGTTCACCTGAGACCTGATATCCACCTG i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132566041 233 + 247869975 TTGTAATTACCTGGGGTC-TGGGCATCCACCTAGGGCTTGAGTATCCTCCTGGGGCC-TTGAGTTTTACTGGAGACTCGTGTCTGCCTTGGACCTGGGTGTACATCTGTTGCCTAATGCACACCTTGAGAGTGATGTCAACCTGGGGACACATGTCCTCTTGGGGTCTGAGTGTGCACCTGGTGCCTGATGTCTGCCTGGGGACTTGTGTTCACCTGAGACCTGATATCCACCTG i panPan2.chr2B M 859 C 0 s gorGor5.CYUI01000801v1 72684 233 + 95358 TTGTAATTACCTGGGTTC-TGGGCATCCACCTAGGGCTTGAGTATCCTCCTGGGGCC-TTGAGTTTTACTAGGGACTCATGTCTGCCTTGGACCTGGGTGTACATCTGTTGCCTAATGTACACCTTGAGAGTGATGTCATCCTGGGGACAGATGTCCTCTTGGGGTCTGAGTGTGCACCTGGTGCCTGACGTCTGCCTAGGGACTTGTGTTCACCTGACACCTGATATCCACCTG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 268040 233 + 1485088 TTGTAATTACCTGGGGTC-TGGGCATCCACCTAGGGCTTGAGTATCCTCCTGGGGCC-TTGAGTTTTACTGGGGACTCGTGTCTGCCTTGGTCCTGGGTGTACATCTATTGCCTAATGTATACCTTGAGAGTGATGTCAACCTGGGGACAGATGTCCTCTTGGGGTCTGAGTGTGCACCTGGTGCCCGATGTCTGCCTGGGGACTTGTGTTCACCTGAGACCTGATATCCACCTG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 12397 234 + 30162 TTGTAGCTACCCAGGGTCTTGGGTGTCCACTTGGGGCTTGAGTGTACTCCTGGGGTC-TGGGGTTCTCCTGGAACCTGCTGTCTGCTTAAGGCTTGGGAATATAACTGTGGCCTGATATAAACCTATAAATGGATATTCACCTGGGGACAGATGTCCACTTGGGGCCTGAGTGTCCACATGGTGCCTGATGTCTACCTGGGGTCTGGTGTTCACCTGAGGCCTGATATCCACCAG i macFas5.chr9_KE145707_random C 0 I 7 s chlSab2.chrUn_KE147573v1 17832 234 + 85383 TTACAGTTACCTGAGGTC-TGGGCATCCAACTAGGGCTTGAGTGTCCTCTTGGGGGCGTTGAATTTTACTGGGGACTCCTGTCTGCCTTGGACCTGGGTGTACATCTGTTGCCTAATGTACACCTTGAGAGGGATGTCAACCTGAGGACAGATGTCCTCTGAGGGTCTCAGTGTCCACCTGGTGCCTGATGTCTACCTGGGGCCTTGTGTTCACCTGGCACCTGTTATCCACCTA i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 547849 233 - 854822 TTGTAGTTACCTGAGGTC-TGGGCATCCAACTAGGGCTTGAGTGTCTTCCTGGGGGT-GTTAGTTTTACTGGGGACTCCTGTCTGCCTTGGACCTGGGTGTACATCTGTTGCCTAATGTATACCTTGAGAGGGATGTCAATCTGAGGACAGATGTCCTCTTAGGGTCTCAGTGTCCACCCGGTGCCTGATGTCTGCCTGGGGCCTTGTGTTCACCTGGCACCTGTTATCCACCTG i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I e cerAty1.NW_012003779v1 35764 19 - 323133 I a score=22388.000000 s hg38.chr9_KI270719v1_random 97561 13 + 176845 GGGACTGGGCGTC s panTro5.chr20 31456930 13 + 66533130 GGGACTGGGCGTC i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132566274 13 + 247869975 GGGCCTGGGCGTC i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 72917 13 + 95358 GGGCCTGGGTGTC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 268273 13 + 1485088 GGGCCTGGGCATC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s chlSab2.chrUn_KE147573v1 18066 13 + 85383 GGGCCTGGGCATC i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 548082 13 - 854822 GGGCCTGGGCATC i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I e cerAty1.NW_012003779v1 35764 19 - 323133 I e macFas5.chr9_KE145707_random 12631 7 + 30162 I a score=150332.000000 s hg38.chr9_KI270719v1_random 97574 83 + 176845 CACG-AGGGGCTGATGTTCAGCTGGACACTGGATATCCACCTGGGGCTTGGGGA-----------------TCCATCCAGAAACTGATGTCAAACTGGGGC s panTro5.chr20 31456943 83 + 66533130 CACG-AGGGGCTGATGTTCAGCTGGACACTGGATATCCACCTGGGGCTTAAGGA-----------------TCCACCCAGAAACTGATGTCAAACTGGGGC i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132566287 83 + 247869975 CACG-AGGGGCTGATGTTCAGCTGGAGACTGGATATCCACCTGGGGCTTAGGGA-----------------TCCACCCAGAAACTGATGTCAAACTGGGGT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 72930 82 + 95358 CACG-AGGGGCTGATGTTCAGCTGGAGACTGGATATCCACCTGGGGCTTGGGGA-----------------TCCAT-CAGAAACTGATGTCAAACTGGGGC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 268286 83 + 1485088 CACG-AGGGGCTGATGTTCAGCTGGAGACTGGATATCCACCTGGGGCTTAGGGA-----------------TCCACCCAGAAACTGATGTCAAACTGGGGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 10861 101 - 30162 CTCATAGACCCTGGTGTCAATTTGGGGCCTGGGTATTTAGCTGGGGCCTGGATATTCAGGGGTACATCATGTCTACTGGGGTCTTTGTGTCAATCTGAGCT i macFas5.chr9_KE145707_random I 778 C 0 s chlSab2.chrUn_KE147573v1 18079 84 + 85383 CACGTGGAAACTGATGTTCAGCTGGAGACTGGATATCCACCTGGGGCTTAGGGA-----------------TCTACCCAGAAACTGATGTCAAACTGGGGC i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 548095 84 - 854822 CACATGGGAACTGATGTTCAGCTGGAGACTGGATATCCACCTGGGGCTTAGGGA-----------------TCCACCCAGAAACTGATGTCCAACGCGGGT i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I e cerAty1.NW_012003779v1 35764 19 - 323133 I a score=87321.000000 s hg38.chr9_KI270719v1_random 97657 29 + 176845 CTGATGTCTACCTGCGGACTAGGTATCCA s panTro5.chr20 31457026 29 + 66533130 CTGATGTCTACCTGCGGACTAAGTATCCA i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132566370 29 + 247869975 CTGATGTCTACCTGGGGACTAGGTATCCA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 73012 29 + 95358 CTGATGTCTACCTGCGGACTGGGTATCCA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 268369 29 + 1485088 CTGATGTCTACCTGGGGACTAGGTATCCA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 10962 29 - 30162 CTGATGTCCACCTAGGGATTGGGTATCCA i macFas5.chr9_KE145707_random C 0 I 1944 s cerAty1.NW_012003779v1 35783 29 - 323133 CTGATGTCTACCTGGGGACTAAGTATCCA i cerAty1.NW_012003779v1 I 19 C 0 s chlSab2.chrUn_KE147573v1 18163 29 + 85383 CTGATGTCTACCTGGGGACTAAGTATCCA i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 548179 29 - 854822 CTGATATCTACCTGGGGACTAAGTATCCA i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=917548.000000 s hg38.chr9_KI270719v1_random 97686 293 + 176845 TGTGAGGCTTGATGTTCATCCACGGCCAGACGTCCATCTGATGCTTGATGTCCACCTTACTCCTGGGTGTCTACTAGAGACCTCATGTCCAACTAGAATTTAGGAACCTACTGGGGGCCTCGTGTAAACCTGGGGACTGGTATGAAGCTGGGTCCTAATGATCCCCTGGGTCATATTATTCACCTAGGGCCTCATGTCCACTTGGGGCTTCAGTGTCAAACTTAGGTCTTGTGTTCATCTTTGACCTGGTGTACACCTGGGAC----------ACCTACGGACTTGTTGTCCAATTGAGGTGT s panTro5.chr20 31457055 303 + 66533130 TGTGAGGCTTGATGTTCATCCGCAGCCAGACGTCCATCTGATGCTTGATGTCCACCTTAGTCCTGGGTGTCTACTGGAGACCTCATGTCCAACTAGAGCTTAGGAACCTACTGGGGGCCTCGTGTAAACCTGGGGACTGGTATGCAGCTGGGTCCCAATGATCCCCTGGGTCATATTATTCACCTAGGGCCTGGTGTCCACTTGGAGCTTGAGTGTCAGCCTTAGGTCTTGTGTTCATCTTTGACGTGGTGTCCACCTGGGACTTGGGTATCAACCTGAGGACTTGGTGTCCAGTTGAGGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132566399 303 + 247869975 TGTGAGGCTTGATGTTCATCCACGGCCAGATGTCCATCTGATGCTTGATGTCCACCTTAGTCCTGGGTCTCTACTGAAGACCTCATGTCCAACTAGAGCTTAGGAACCTACTGGGGGCCTCGTGTACACCTGGGGACTGGTATGCAGCTGGGTCCTAATGACCCCCTGGGTCATATTATTCACCTAGGGCCTCATGTCCACTTGGGGCTTCAGTGTCAACCTTAGGTCTTGTGTTCATCTTTGACCTGGTGTCCACCGGGGACTTGGGTATCAACCTGAGGACTTGGTGTCCAATTGAGGTGT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 73041 293 + 95358 TGTGAGGCTTGATGTTCATCCATGGCCAGACGTCCATCTGATGCTTGATGTCCACCTTACTCCTGGGTGTCTACTGGAGACCTCATGTCCAACTAGAGCTTAGGAACCTACTGGGGGCCTCGTGTAAACCTGGGGACTGGTATGAAGCTGGGTCCTAATGATCCCCTGGGTCATATTATTCACCTAGGGCCTCATGTCCACTTGGGGCTTCAGTGTCAACCTTAGGTCTTGTGTTCGTCTTTGACCTGGTGTACACCTGGGAC----------ACCTGAGGACTTGGTGTCCAATTGAGGTGT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 268398 303 + 1485088 TGTGAGGCTTGATGTTCATCCACGGCCATATGTCCATCTGATGCTTGATGTCCACCTTAGTCCTGGGTGTCTACTGGAGACCTCATGTCCAACTAGAGCTTAGGAACTTACTGAGGGCCTCGTGTAAACCTGGGGACTGGTATGCAGCTGGGTCCTAATGATTCCCTGGGTCATATTATTCACCTAGGGCCCGGTGTCCACTTGGGGCTTGAGTGTCAACCTTAGGTCTTGTGTTCATCTTTGACCTGGTGTCCACCTGGGACTTGGGTATCAACCTGAGGACTTGGTGTCCAGTTGAAGTGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 12935 303 - 30162 TGTGAGGCTTGATGTTAATCTGTGGCCAGATGTCCATCTGATGCTTGATGTCCACCTTAGTCCTGGGTGTCTACTAGAGACCTCATGTCCAACTAGAGCTTAGGAAACCACTGGGAGCTTCGTGTAAACCTGGGGACTGGTATGCAGCTGGGTCCTAATGATTCCCTGGGTCATATTATTCACCTAGGGCCTGGTGTCCACTTGGGGCTTGAATGTCAACCTTAGGTCTTGTGTTCATCTTTGACCTGGTGTCCACCTGGGACTTGGGTATCAACCTGAAGACTTGGTGTCTAGTTAAGGTGT i macFas5.chr9_KE145707_random I 1944 I 4137 s cerAty1.NW_012003779v1 35812 303 - 323133 CGTGAGGCTTGATGTTCATCTGTGGCCAGATGTCCAACTGATGCTTGATGTTCACCTTAGTCCTGGGTGTCTACTAGAGACCTCATGTCCAACTAAAGCTTAGGAAACCACTGGGGGCTTCGTGTAAACCTGGGGACTGCTATGCAGCTGGGTCCTAATGATCCCCTGGGTCATATTATTCACCTAGGGCCTGGTGTCCACTTGGGGCTTGAATGTCAACCTTAGGTCTTGTGTTCATCTTTGACCTGGTGTCCACCTGGGATTTGGGTATCAACCTGAGGACTTGGTGTCTAGTTAAGGTGT i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 18192 303 + 85383 TGTGAGGCTTGATGTTCATCTGCGGCCAGATGTCCATCTGATGCTTGATGTCCACCTTAGTCCTGGGTGTCTACTGGAGACCTCATGTCCAACTAGAGCTTAGGAACCCACTGGAGGCTTCGTGTAAACCTGGGGACTGGTATGCAGCTGGGTCCTAATGATCCCCTGGGTCATAATATTCACCTAGGGCCTGGTGTCCACTTGGGGCTTGAGTGTCAACCTTAGGTCTTGTGTCCATCTTTGACCTGGTGTCCACCTGGGACTTGAGTATCAACCTGAGGACTTGGTGTCCAGTTAAGGTGT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 548208 302 - 854822 TGTGAGGCTTGATGTTCATCTGCGGCCAGATGTCCATCTGATGCTTGATGTCCACCTTAGTCCTGGGTGTCTACTGGAGACCTCATGTCCAACTAGAGCTTAGGAACCCACTGGGGGCTTCGTGTAAACCTGGGGACTG-TATGCAGCTGGGTCCTAATGATCCCCTGGGTCATATTATTCACCAAGGGCCTGGTGTCCGATTGGGGCTTGAGTGTCAACCTTAGGTCTTGTGTTCATCTTTGACCTGGTGTCCACCTGGGACTTGGGTATCAACCTGAGGACTTGGTGTCCAGTTAAGGTGT i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=2001228.000000 s hg38.chr9_KI270719v1_random 97979 769 + 176845 CATGACCACCTGGGGACTGAATGTCAATCTGGGGTCTGATGTAAACCTCTAGTTCAGTATCCACCTGGGCCTGGTCTTCGCTTGGGGCCTGCTGTCTACCTGGGCCTTGCTGTCAACCTAGGGCCTGATGTAAACCTCTAGTTCAGTATCCACCTGGG------------------GTCAGATGTCTTCCTAGAGACTTATATTCACTTTTGACCTGATGTCCACCTGGGGACTTGCTATCCATCCATGGTCTGATATTCACCTGGAGACAGATGTTCAACTGTGGTCAGAAGTGCTCCTGGGGTCTGGGCTTCCACCTGGAGCCTGATGTTTAGCTGGGG-CTAGAGTTCACATGGAGAATGATGTCCACCTGAAGTTTGATGTTTACCTGGGGCCT----------------------------GATACCTACCTGGTGCCCAAGTA---TTCTCATG-TGCCTAACATCCACTAGTTGGCCTGATGTTCATCTGAGGGCTTGGTGTCAACCAGTGGCTTTATGTACACCTGGATTCTAGTGTCCTCCTGGGGTCTTATGCCTACCAGGAGTCTGGTGTACCCCTGGGGTCTAG-------------------TATCCACCT--------GCAGTC--------TGGGCGTCCACCTGGAGCCTAATGTTGAGGTTAGA--CTGAGTGTCAGCCTGAGGCCTGATGTCTACT-AGGGCATAGATATTCACCTGGGGCTTGTTGTT------------------TACCTGGGGACTAATGTCAACCTTGAGCCTAGGTATCCACCTGGGGAATAGTGTCCAGTTGCAGCCAGATGTCCACCTATGGCCTGAAGCATGGTTGTTATCCTAAGTCCT s panTro5.chr20 31457358 680 + 66533130 CATGACCACCTGGGGACTGAATGTCAATCTGGGGTCTGATGT-----------------------------------------------------------------------------------------AAACCTCTAGTTCAGTATCCACCTGGG------------------GCCAGATGTCTTCCTAGAGACTTATATTCACTTTTGACCTGATGTCCACCTGGGGACTTGCTATCCATCCATGGTCTGATATTCACCTGGGGACAGATGTTCAACTGTGGCCAGAAGTGCACCTGAGGTCTGGGCTTCCACCTGGGGCCTGATGTTTAGCTGGGG-CTAGAGTTTACGTGGAGAATGATGTCCACCTGAAGTTTGATGTTTACCCGGGGCCT----------------------------GATACCTGCCTGGTGCCCAAGTA---TTCTCATG-TGCCTAATGTCCACTAGTTGGCCTGGTGTTCATCTGAGGGCTTGGTGTCAACCAGTGGCTTTACGTACACCTGGATTCTAGTGTCCTCCTGGGGCCTTATGCTTACCAGGAGTCTAGTGTACCCCTGGGGTCTAG-------------------TATCCACCT--------GGAGTC--------TGGGTGTCCACCTG-AGCCTAATGTTGAGCTTAGA--CTGAGTGTCAGCCTGAGGGCTGATGTCTACTTAGGACATAGGCATTCACCTGGGGCTTGTTGTT------------------TACCTGGGGACTAATGTCAACCTTGAGCCTAGGTATCCACCTGGGGAATAGTGTCCAGTTGCAGCCAGATGTCCACCTGTGGCCTGAAGCATGGTTGTTATCCTAAGGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132566702 769 + 247869975 CATGACCACCTGGGGACTGAATGTCAATCTGGGGTCTGATGTAAACCTCTAGTTCAGTATACACCTGGGCCTGGTCTTCATTTGGGGCCTGCTGTCTACCTGGGCCTTGCTGTCAACCTGGGGCCTGATGTAAACCTCTAGTTCAGTATCCACCTGGG------------------GCCAGATGTCTTCCTAGAGACTTATATTCACTTTTGACCTGATGTCTACCTGGGGACTTGCTATCCCTCCATGGTCTGATATTCACCTGGGGACAGATGTTCAACTGTGGCCAGAAGTGCACCTGGGGTCTGGGCTTCCACCTGGAGCCTGATGTTTAGCTGGGG-CTAGAGTTTACATGGAGAATGATGTCCACCTGAAGTTTGATGTTTACCTGGGGCCT----------------------------GATACCTGCCTGGTGCCCAAGTA---TTCTCATG-TGCCTAACGTCCACTAGTTGGCCTGGTGTTCATCTGAGGGCTTGGTGTCAACCAGTGGCTTTATGTACACCTGGATTCTAGTGTCCTCCTGGAGCCTTATGCCTACCAGGAGTCTGGTGTACCCCTGGGGTCTAG-------------------TATCCAGCT--------GGAGTC--------TGGGCATCCACCTGGGGCCTAATGTTGAGGTTAG---CTGAGTGTCAGCTTGAGGCCTGATGTCTACTTAGGGCATAGGTATTCATCTGGGGCTTGTTGTT------------------TACCTGGGGACTAATGTCAACCTTGAGCCTAGGTATCCACCTGGGGAATAGTGTCCAGTTGCAGCCAGATGTCCACCTATGGCCTGAAGCATGGTTGTTATCCTAAGGCCT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 73334 764 + 95358 CATGACCACCTGGGGACTGAATGTCAATCTGGGGTCTGATGTAAACCTCTAGTTCAGTATCCACCTGGGCCTGGTCTTCGCTTGGGGCCTGCTGTCTACCTGGGCCTTGCTGTCAACCTAGGGCCTGATGTAAACCTCTAGTTCAGTATCCACCTGGG------------------GCCAGATGTCTTCCTAGAGACTTATATTCACTTTTGACCTGATGTCTACCTGGGGACTTGCTATCCATCCATGGTCTGATATTCACCTGGAGACAGATGTTCAACTGTGGCCAGAAGTGCTCCTGGGGTCTGGGCTTCCACCTGGAGCCTGATGTTTAGCTGGGG-CTAGAGTTCACATGGAGAATGATGTCCACCTGAAGTTCGATGTTTACCTGGGGCCT----------------------------GATACCTGCCTGGTGCCCAAGTA---TTCTCATG-TGCCTAATGTCCACTAGTTGGCCTGGTGTTCATCTGAGGGCTTGGTGTCAACCAGTGGCTTTATGTACACCTGGATTCTAGTGTCCTCCTGGGGCCTTATGCCTACCAGGAGTCTGGTGTACCCCTGGGGTCTAG-------------------TAT----CT--------GGAGTC--------TGGGTGTCCACCTG-AGCCTAATGTTGAGGTTAGA--CTGAGTGTCAGCCTGAGGCCTGATGTCTACT-AGGGCATAGGTATTCACCTGGGGCTTGTTGTT------------------TACCTGGGGACTAATGTCAACCTTGAGCCTAGGTATCCACCTGGGGAATAGTGTCCAGTTGCAGCCAGATGTCCACCTATGGCCTGAAGCATGGTTGTTATCCTAAGGCCT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 268701 770 + 1485088 CATGACCACCTGGGGACTGAATGTCAATCTGGGGTCTGATGTAAACCTCTAGTTCAGTATACACCTGGGCCTGGTCTTCACTTGGGGCCTGCTGTCTACCTGGGCCTTGCTGTCAACCTGGGGCCTGATGTAAACCTCTAGTTCAGTATCCGTCTGGG------------------GCCAGATGTCTTCCTAGAGACTTATATTCACTTTTGACCTGATGTCCACCTGGGGACTTGCTATCCATCCACGGCCTGATATTCACCTGGGGACAGATTTTCAACTGTGGCCAGAAGTGCACCTGGGGTCTGGGCTTCCACCTGGAGCCTGATGTTTAGCTGGGG-CTAGAGTTTATATGGAGAATGACGTCCACCTGAAGTTTGATGTTTACCTGGGGCCT----------------------------GATACCCACCTGGTGCCCAAGTA---TTCTCATG-TGCCTAATGTCCACTAGTTGGCCTGGTGTTCGTCTGAGGGCTTGGTGTCCACCAGTGGCTTTATGTACACCTGGATTCTAGTGTCCTCCTGGGGCCTTATGCCTACCAGGAGTCTGGTATACCCCTGGGGTCTAG-------------------TATCCTCCT--------GGAGTC--------TGGGTGTCCACCTGGAGCCTAAATTTGAGCTTAGA--CTGAGTGTCAGCCTGAGGCATGATGTCTACTTAGGGCATAGGTATTCACCTGGGGCTTGTTGTT------------------TACCTGGGGACTAATGTCAACCTTGAGCCTAGGTATCCACCTGGGGAATAGTGTCCAGTTGCAGCCAGATGTCCACCTATGGCCTGAAGCATGGTTGTTATCCTAAGACCT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 12638 832 + 30162 CGTATCCACCTGAGTCCTG-GTTTCTATCTGGGACCTGATG------------------TCCACCTAGGTCTGGTATTCACCTAAGGTGTACTACCCACCTGGTCCTGGATGTTAACTTGCGGACTGATGTAGACCTCAAGTTCAGGGTCCACCTGGGACCTTATGGCAACCTTGAGCCTGACGTTCGCCTGGGGACTGATGTTCACCTTTGACCTAATGTCCACCTGATGACTGGATATTCACCCACAGCCAAATGTCCACCTGAGGCCAGATGGCCAACTGTGGCCAGATGTACAACTGAGGTCTGGGTATTCCCTTGGGACTTGATGTTCAGCTGGGGCCTAAGGTTAACCCAGGCCATGATGTCCACCTGAAGCTTGATGTCCACCTGGGGCCTGGGTGGCCAGATGTGCAACTGGGGCCTGGGTATCCACCTGGGGCCTAAGTGTCCTTCTCATGCCACCTGATATCCACCAGTTGGCCTGATGTTCATCTGGAGATGTGGGGTCAACCGGCAGCCTGATGTGGACATAGATTCCAATGTCCTCTCGGGGCCTGATGTACACCTGGGGCCTAGTATCCACTTGGGGCCTGGGATTTTACTGTTGGCCTGATGTTCACCGAGGTCCTAGGAATCTTTCCTGACTGGTGTCCACCTGGGTCCTGATGTTCAGCTTGGGACTTGAGTGCTTAGCTGGGACCTGATGCCCACTTGGGGCATAGGTATTCACCTAGGGCCTGGTGTTCACTTGGGGCCTGGTGTACACCTGGGGCCTGATATCAACCTTGAATCTAGGTGTTCACTTGGGGACTGCTGTCTA-------------------------CCTGGTGCATGGTTATCAACCTAGGACCT i macFas5.chr9_KE145707_random I 7 I 211 s cerAty1.NW_012003779v1 36115 759 - 323133 CATGACCACCTGGGGACTGAATGTCAATCTGGGGTCTGATGTAAACCTCTAGTTCAGTATCCACCTGGGCCTGGTCTTCACCTGGGGCCTGCTGTCTACCTGGGTCTTTCTGTCAACGTGGGGTCTGATGTAAACCTCTAGTTCAGTATCCACCTGGG-----------------------------GCCTAGAGACTTATATTTGCTTTTGACCTGATGTCCACCTGGGGACTTGCTATCAATCCATGGTCTGATGTTCACCTGGGGACAGATGTTCAACTGTGGCCAGAAGTGCACCAGGGGTCTGGGCTTCTACCTGGAGCCTAATGTTTAGCTGGGG-CTAGAGTTTACTTGGAGAATGATGTCCACCTGAAGTTTGATGGTCACCTGGGGCCT----------------------------GATACCCACCTGGTGCCCAAGTA---TTCTCACG-TGCCTAATGTCTACCAGTTGGCCTGGTGTTCATCTGAGGACTTGGTGTCAACTGGTGGCTTTATGTACACCTGGATTCTAGTGTCCTCCTGGGGCCTTACGCCTACCAGGAATCTGGTGTACCCCTGGGGCCCAG-------------------TGTCCACCT--------GGAGTC--------CGGGTGTCCACCTGAAGCCTAATGTGGAGCTTGGG--CTGAGTGTCAGCCTGAGGCCTGATGTCTGCTTGGGGCACAGGTGTTTACCTGGGGCTTGTTGTT------------------TACCTGGGGATTAATGTCAACCTTGAGACTAGGTATCCACCTAGGGAATAGTGTCCAGCTACAGCCAGATGTCCACCTATGGCCTGTAACATGGTTGTTATCCTAAGGCCT i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 18495 770 + 85383 CATGATCACCTGGGGACTGAATGTCAACCTGGGGTCTGATGTAAACCTCTAGTTCAGTATCCACCTGGGCCTGGTCTTCACCTGGGGTCTGCTGTTTACCTGGGCCTTGCTGTCAACCTGGGGCCTGATGTAAACCGCTAGTTCAGTATCTATCTGGG------------------GCCAGATATCTTCCTAGAGACTTATATTCCCTTTTGACCTGATGTCCACCTGGGGACTTGCTATCCATCCGTAGTCTGATGTTCACCTGGGGACAGATGTTCAACTGTGGCCAGAAGTGCACCTGGAGTCTGGGCTTCCACCTGGAGCCTGATGCTTAGCTGGGG-CTAGGGTCTACATGGAGAATGATGTCCACCTGAAGTTTGATGTTCACCTGGGGCCT----------------------------GATACCCACCTGGTGCCCAAGTA---TTCTCATG-TGCTTAATGTCCACCAGTTGGCCTGGTGTTCATCTGAGGGCTTGGTGTCAACCGGTGGCTTTACGTACACCTGGATTCTAGTGTCCTCCTGGGGCCTTATGCCTACCAGGAATCTGGTGCACCCCTGGGGCCCAG-------------------TATCCACCT--------GGAGTC--------TGGGTGTCCACCTGGAGCCTAATGTGGAGCTTGTG--CTGAGTGTCAGCCTGAGGCCTGATGTCTACCTGTGGCACAGGTGTTTACCTGGGGCTTGTTGTT------------------TACCTGGGGACTAATGTCAATCTTGAGCCTAGGTATCCACCTGGGGAAGAGTGTCCAGCTGCAGCCAGATGTCCACCTATGGCCTGCAACATGGTTATTATCCTAAGGCCt i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 548510 759 - 854822 CATGACCGCCTGGGGACTGAATGTCAATCTGGGGTCTGATGTAAACCTCTAGTTCAGTATCCACCTGGGCCTGGTCTTTACCTGGGGCCTGCGGTCTACCTAGGCCTTGCTGTCAACCTGGGG-----------CTGCTAGTTCAGTATCTACCTGGG------------------GCCAGATGTCTTCCTAGAGACTTATATTCCCTTTTGACCTGATGTCCACCTAGGGACTTGCTATCCATCCGTAGTCTGATGCTCACCTGGGGACAGATGTTCAACTGTGGCCAGAAGTGCACCTGGGGTCTTGGCTTCCACCTGGAGCCTGATGTTCAGCTGGGG-CTAGGGTCTACATGGAGAATGATGTCCACCTGAAGTTTGATGTTCACCTGGGGCCT----------------------------GATACCCCCCTGGTGCCCAAGTA---TTCTTATG-TGCCTAATGTCTACCAGTTGGCCTGGTGTTCATCTGAGGGCTTGGTGTCAACCAGTGGCTTTATGTACACCTGGATTCTAGTGTCCTCCTGGGGCCTTATGTCTACCAGGAATCTGGTGCACCCCTGGGGCCCAG-------------------TATCCACCT--------GGAGTC--------TGGGTGTCCACCTGGAGCCTAATGTGGAGCTTGTG--CTGAGTGTCAGCCTGAGGCCTGATGTCTACTTGGGGCACAGGTATTCACCTGGGGCTTGTTGTT------------------TACCTGGGGACTAATGTCAACCTTGAGCCTAGGTATCCACCTGGGGAAGAGTGTCCAGCTGCAGCCAGATGTCCATCTATGGCCTGCAACATGGTTATTATCCTAAGGCCT i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=709574.000000 s hg38.chr9_KI270719v1_random 98748 327 + 176845 tgtattagtccattttcacactgttataaaaaactacctgatattgggcaacttatgaggaaaaga-ggtttaactgacccacagttcttcaggcttaacagggagcatgactgggcgggctcaggacacttacaatcatgatgtaaagcc---------------ctttttaccatgtgggaggaggagggagacagaagggggatgtgctacacactttcaaataaccaggtctcgtaagaactctatcacgagaacaccaagtgggaagtctgcccccatgattcaatcaccattcaccaggctcattcttcaacccatggggattacaattcaacatga s panTro5.chr20 31458038 342 + 66533130 tgtattagtccattttcacactgttataaaaaactacctgatattgggcaacttatgaggaaaaga-ggtttaactgacccacagttcttcaggcttaatagggagcatgactgggtgggcccaggacacttacaatcatgatgtaaagccaagaggaagcaagccctttttaccatgggggaggaggagggagagagaagggggatgtgctacacactttcaaataaccagatctcgtaagaattctatcacgagaacagcaagtgggaagtctgcccccatgattcaatcacctctcaccacgccccttcttcaacccatggggattacaattcaacatga i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132567471 336 + 247869975 T------gtccattttcacactgttataaaaaactacctgattttgggcaacttatgaggaaaaga-ggtttaactgacccacagttctttaggcttaatagggagaatgactgggtgggctcgggacacttacaatcatgatgtaaagccaagaggaagcaagccctttttaccatgggagaggaggagggagagagaagggggatgtgctacacactttcaaataaccagatctcgtaagaactctatcacgagaacagcaagtgggaagtctgcccccatgattcaatcacctctcacaaggccccttcttcaacccatggggattacaattcaacatga i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 74098 341 + 95358 tgtattagtccattttcacactgttataaaaaactacctgatattgggcaacttatgaggaaaaga-ggtttaactgacccacagttcttcaggcttaatagggagcatgactgggcgggctcaggacacttacaatcatgatgtaaagccaagaggaagcaagc-ctttttaccatgtgggaggaggaaggagacagaagggggatgtgctacacactttcaaataaccaggtctcgtaagaactctatcacgagaacaccaagtgggaagtctgcccccatgattcaatcaccattcaccaggccccttcttcaacccgtggggattacaattcaacatga i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 269471 342 + 1485088 tgtattagtccattttcacactgttataaaaaactacctgatattgggcaacttatgaggaaaaga-ggtttaactgacccacagttcttcaggcttaatagggagcatgactgggtgggcttgggacacttacaatcatgatgtaaagccaagaggaagcaagccctttttaccatgagggagaaggagggagagagaagggggatgtgctacacactttcaaataaccagatctcataagaactctatcacaagaacagcaagtgggaagtctgcccccatgattcaatcacctctcaccaggccccttcttcaacctgtggggattacaattcaacatga i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012003779v1 36874 298 - 323133 TTTATTAGTCCATTTTCACACT---------------------------------------------GTtttaaatgatccacagttctgcaggcttaatatggagcatgactgggagggctcgggaaacttaaaatcatgatgtaaggccaagaggaagcaagccctttttaccatgggggaggaagagggagagagaatggggaagtgctacacactttcaaataaccagatcttgtaagaactctaccacgagaacagcaagtgagaagtctgcccccgtgattccatcacctcccaccaggcccctccttcaacatgtggggattataattcaacatga i cerAty1.NW_012003779v1 C 0 I 2 s chlSab2.chrUn_KE147573v1 19265 336 + 85383 -gtattag------ttcacactgttataaaaaactacatgatacttggcaatttgtgaggaaaagcagttttaaatgactggcagttctgcaggcttaatatggagcatgactgggagggcttggcaaacttacaatcatgatgtaaggccaagaggaagcaagccctttttaccacgggggaggaggatgcagagagaatggggaagtgctacacactttcagataaccagatcttgtaagaactctaccacgagaacagcaagtgagaagtctgcccccatgattcaatcacctcccaccaggcccctccttcaacatgtgaggattacaattcaacatga i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 549269 337 - 854822 ------Tgtccattttcacactgttataaaaaactacctgatatttggcaatttatgaggaaaagaggttttaaatgacccgcagttctgcaggcttaatatggagcatgactgggagggctcggcaaacttacagtcatgatgtaaggccaagaggaagcaagccctttttaccatgggggaggaggaggcagagagaagggggaagtgctgcacacttacaaataaccagatcttggaagaactctatcacgagaacagcaagtgagaagtctgcccccgtgattcagtcacctcccaccaggcccctcctttaacatgtgaggattacaattcaacatga i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I e macFas5.chr9_KE145707_random 13470 211 + 30162 I a score=38691.000000 s hg38.chr9_KI270719v1_random 99075 20 + 176845 gatttgggtggagacataga s panTro5.chr20 31458380 20 + 66533130 gatttgggtggagacataga i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132567807 20 + 247869975 gatttgggtggagacataga i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 74439 20 + 95358 gatttgggtggagacataga i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 269813 20 + 1485088 gatttgggtggagacataga i nomLeu3.chrUn_GL397501_2 C 0 C 0 s chlSab2.chrUn_KE147573v1 19601 20 + 85383 gatttgggtggagacagaga i chlSab2.chrUn_KE147573v1 C 0 I 4 s colAng1.NW_012118199v1 549606 20 - 854822 gatttgggtggagacataga i colAng1.NW_012118199v1 C 0 I 4 e ponAbe2.chrUn 60074448 0 - 72422247 I e cerAty1.NW_012003779v1 37172 2 - 323133 I e macFas5.chr9_KE145707_random 13470 211 + 30162 I a score=989263.000000 s hg38.chr9_KI270719v1_random 99095 472 + 176845 gccaatatcaGGCCTGATGCCCGCCTGGAGTC--ATGTCTACCTGAGGCCTAATGTAGACATGAGGCCTGGGCATTCACCTAGGACCTCATGTTAAGATAGGTGCTGGAGTTCTTTTGGTGCCTAGTGTATACCTGGGGCCCAGATGTATAACTAGAACCTGATGTTTCAGATGGAAACCTGGGCCCCAGGTGCTCATCAGATCCCACGTGAAAACTCAGGCTTCAGGTGCACATCAGACTCCAAGTGGACACATAGGCCCTAGGTTGATACCAAGATTTCAGGTAGACTCTGGGTCCCAGAAAAACACCCCGCCCTAGGTGGACAGCTGAACCTGA-GTAGACATCAGGCCCCGGATTGACATCTGGCCTCAGGTAGATTCCTAGGCCCAAGGTGAATACTCAGTCTCCTGCCCTAGGGGAATTCAGTCTTAGGTGATTAAGGACTGGTGTTCCTCTGGGGCCTCATGTCTACC s panTro5.chr20 31458400 472 + 66533130 gccaatatcaGGCCTGATGCCCGCCTGGAGTC--GTGTCTACCTGAGGCCTAATGTAGACATGAGGCCTGGGCATCCACCTAGGACCTCATGTTAAGATAGGTTCTGGAGTTCTTTTGGTGTCTAGTGTATACCTGGGGCCCAGATGTATAACTAGAGCCTGATGTTTCAGATGGAAACCTGCGCCCCAGGTGCTCATCAGATCCTAGGTGAAAATTCAGGCTTCAAGTGCACATCAGACTCCAAGTGGACACATAGGCCCCAGGTTGATACCAAGATTTCAGGTAGACTCTGGGTCCCAGAAAAACACCCCGCCCTAGATGGACAGCTGAACCTGA-GTAGGCATCAGGCCCCAGATCAACATCTGGCCCCATGTAGATTCCTAGGCCCAAGGTGAATACTCAGTCTCCAGCCCTAGGGGAATTCAGTCTTAGATGACTAAGGACTGGTTTTCCTCTGGGGCCTCATGTCTACC i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132567827 454 + 247869975 gccaatatcaGGCCTGATGCCCACCTGGAATC--GTGTCTACCTGAGTCCTAATGTAGACATGAGGCCTGGGCATCCACCTCGGACCTCATGTTAAGATATGAGCTGGAGTTCCTTTCGTGTCTAGTGTATACCTGGGGCCCAGATGTATAACTAGAGCCTGATGTTTCAGATGGAAACCTGGGCCCCAGGTGCTCATCAGATCCTAGGTGAAAACTCAGGCTTCAGGTGCACATCAGACTCCAAGTGGACACATAGGACCCAGGTTGATAACAAGATTTCAGGTAGACTCTGGGTCCCAGAAGAACACCCTGCCCTAGGTGGACAGCTGAACCTGA-GTAAACATCAGGCCCCAGATC------------------GATTCCTAGGCCCAAGGTGAATACTCAGTCTCCAGCCCTAGGGGAATTCAGTCTTAGGTGACTAAGGACTGGTGTTCCTCTGGGGCCTCATGTCTACC i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 74459 472 + 95358 gccaatatcaGGCCTGATGCCCGCCTGGAGTC--ATGTCTACCTGAGGTCTAATGTAGACATGAGGCCTGGGCATTCACCTAGGACCTCATGTTAAGATAGGGGCTGGAGTTCTTTTGGTGCCTAGTGTATACCTGGGGCCCAGATGTATAACTAGAACCTGATGTTTCAGATGGAAACCTGGGCCCCAGGTGCTCATCAGATCCCAGGTGAAAACTCAGGCTTCAGGTGCACATCAGACTCCAAGTGGACACATAGGCCCTAGGTTGATACCAAGATTTCAGGTAGACTCTGGGTCCCAGAAAAACACCCCACCCTAGGTGGACAGCTGAACCTGA-GTAGACATCAGGCCCCACATCGACATCTGGCCCCAGGTAGATTCCTAGGCCCAAGGTGAATACTCAGTCTCCAGCCCTAGGGGAATTCAGTCTTAGGTGATTAAGGACTGGTGTTCCTCTGGGGCCTCATGTCTACC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 269833 472 + 1485088 gccaatatcaGGCCTGATGCCCACCTGGAATT--GTGTCTACCTGAGGCCTAATGTAGACAGGAGGCCTGGTCGTCCACCTAGGACCTCATGTTAAGATAGGGGCTGGAGTTCTTTTGGTGTCTAGTGTATACCTGGGGCCCAGATGTATAACTAGAGCCTGATGTTTCAGATGGAAACCTGGGCCCCAGGTGCTCATCAGATCCTAGGTGAAAACTCAGGCTTCAGGTGCACATCAGACTCCAAGTGGACACATAGGCCCCAGGTTGATAACAAGATTTCAGGTAGACTCTGGGTCCCAGAAAAATACCCCACCCTAGGTGGACAGCTGAACCTGA-GTAGACATCAGGCCCCAGATCGACATCTGGCCCCAGATAGATTCCTAGGCCCAAGGTGAATACTCAGTCTCCAGCCCTAGGGGAATTCAGTCTTAGGTGACTAAGGACTGGTGTTTCTCTGGGGCCTCATGTCTACC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 13681 448 + 30162 ACC----TCAGGGCCAATGTCCACCTGGAATCCAGTGTCTA-ATAGAGCCTAATGTACACATAGGGCTCTGGCAGTCACCTGGGACCTGATATACAGACATGGTCTTGAGTTTACCTGGGGCCTGGTATCTAC--AGGGCCTTGGTGTACACCTGGAACCAGATACCCCAGGTGGGTACCTGGGTCCCAGATGGTCATTAGGTCCTAGCTGGAAACTCAGGCTCCAGATGCACATCAGGCTGCAAGTGGATACACAGGTCACAGGGTGATACCCAGGTTCCAGGTGGACACTGGGCTCAAGAGGAACACAATGGCCCAGGTGGACATCCAGGCCTGAGGTGGACATCATGCCCCAGATAGACATCTGGCCCCAGCTGGATACCTAGGCCC------------CAGTCATTGGCCCTAGGTAGACCCAGCCATATGTGACTAAGG--------TCATCCAGAATCTAATGTCCACC i macFas5.chr9_KE145707_random I 211 C 0 s chlSab2.chrUn_KE147573v1 19625 472 + 85383 aactatatcaGGCCTGATGCCCACCTGGAGTC--GTGTCTACCTGGGGCCTAATGTAGACATGAGGCCTGGGCATCCACCTAGGACCCCATGTTAAGATAGGGTCTGGAGTTCTTTTGGTGTCTAGTGTATACCTGGGGCCCAGATGTATATGTAGAGCCTGATGTTTCAGATGGAAACTTGGGCCCCAGGTGCTCATCAGATCCTAGGGGAAAACTCAGGCTTCAGGTGCACATCAGGCTCCAAGTGGACACGTAGGTCCCAGGTTGATACCAAGATTTCAGGTGGACTCTGGGTCCCAGAAAAACACCCCACCCTAGGTGGACATCTGAACCTGA-GTAGACATCAGGCCCCAGATGGACATCCGGCCCCAGGTAGATTCCTAGGCCCCAGGTGAATACTCAGTCTCCAGCCCTAGGGGAATTCAGTCTTAGGTGACTGAGGACTGGTGTTCCTCTGAGGCCTCATGTATACC i chlSab2.chrUn_KE147573v1 I 4 C 0 s colAng1.NW_012118199v1 549630 472 - 854822 aactatatcaGGCCTGATGCCCACCTGGAGTT--GTGTCTACCTGGGGCCTAATGTAGACAAGAGGCCTGGGCATCCACCTAGGACCCCATGTTAAGATAGGGTCTGGAGTTCCTTTGGTGTCTAGTGTATACCTGGGGCCCAGATGTATATCTGGAGCCTGATGTTTCAGATGGAAACCTGGGCCCCAGGTGCTCATCAGATCCTAGGTGAAAACTCAGGCTTCAGGTGCACATCAGGCTCCAAGTGGACACGTAGGCCCCAGGTTGATACCAAGATTTCAGGTGGACTCTGGGTCCCAGAAAAACACCCCGCCCTAGGTGGACATCTGAACCTGA-GTAGACATCAGGCCCCAGATGGACATCTGGCCCCAGGTAGATTCCTAGGCCCCAGGTGAATACTCAGTCTCCAGCCCTAGGGGAATTCAGTCTTAGGTGACTAAGGGCTGGTGTTTCTCTGGGGCCTCATGTATACC i colAng1.NW_012118199v1 I 4 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I e cerAty1.NW_012003779v1 37172 2 - 323133 I a score=115581.000000 s hg38.chr9_KI270719v1_random 99567 39 + 176845 TGGGCCCTGGGAGTGCACATGGAGCCAGATGTCTATAAA s panTro5.chr20 31458872 39 + 66533130 TGGGCCCTGGGAGTGCACATGGAGCCAGATGTCTATAAA i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568281 39 + 247869975 TGGGCCCTGGGAGTGCACATGGAGCCAGATGTCTATAAA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 74931 39 + 95358 TGGGCCCTGGGAGTGCACATGGAGCCAGATGTCTATAAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270305 39 + 1485088 TGGGCCCTGGGAGTGCACATGGAGCCAGATGTCTATAAA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14129 39 + 30162 TGGAACCTGGGTGTCCACATAGGGCCATGTATCTGTATG i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 37174 39 - 323133 tgggccctgggaatacacatGGAGCCAGATGTCTATAAA i cerAty1.NW_012003779v1 I 2 C 0 s chlSab2.chrUn_KE147573v1 20097 39 + 85383 TGGACCCTGGGAGTGCACATGGAGCCAGATGTCTATAAA i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550102 39 - 854822 TGGACCCTGGGAGTGCACATGGAGCCAGATGTCTATAAA i colAng1.NW_012118199v1 C 0 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=7830.000000 s hg38.chr9_KI270719v1_random 99606 2 + 176845 GG s panTro5.chr20 31458911 2 + 66533130 GG i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568320 2 + 247869975 GG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 74970 2 + 95358 GG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270344 2 + 1485088 GG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14168 2 + 30162 GG i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 37213 2 - 323133 GG i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 20136 2 + 85383 GG i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550141 2 - 854822 GG i colAng1.NW_012118199v1 C 0 C 0 s rhiRox1.KN298119v1 9224 1 - 60063 -G i rhiRox1.KN298119v1 N 0 I 11886 e ponAbe2.chrUn 60074448 0 - 72422247 I a score=431804.000000 s hg38.chr9_KI270719v1_random 99608 146 + 176845 GCCTGAGTGTCCACTAGGGCCTGAGGTTCACCAGGAGCATAGACA------------------TCCACCTAGGACCTCGTGTCCACCTAAAACCTGGTGTTCACCTGGGGCCTGGGTGACAACCTGGGATCTGATGTTCACCTGAGGCCCAGAGTTCAGCTGGT s panTro5.chr20 31458913 146 + 66533130 GCGTGAGTGTCCCCTAGGGCCTGAGGTTCACCAGAAGCATAGACA------------------TCCACCTAGGACCTTGTGTCCACCTAAAACCTGGTGTTCACCTGGGGCCTGGGTGACAACCTGGGATCTGATGTTCACCTGAGGCCCAGAGTTCAGCTGGT i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568322 146 + 247869975 GCCTGAGTGTCCACTAGGGCCTGAGGTTCACCAGGAGCATAGACA------------------TCCACCTAGGACCTCATGTCCACCTAAAACCTGGTGTTCACCTGGGGCCTGGGTGACAACCTGGGATCTGATGTTCACCTGAGGCCCAGAGTTCAGCTGGT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 74972 146 + 95358 GCCTGAGTGTCCACTAGGGCCTGAGGTTCACCAGGAGCATAGACA------------------TCCACCTAGGACCTCGTGTCCACCTAAAACCTGGTGTTCACCTGGGGCCTGGGTGACAACCTGGGATCTGATGTTCACCTGAGGCCCAGAGTTCAGCTGGT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270346 146 + 1485088 GCCTGAGTGTCCACTAGGGCCTGAGGTTCACCAGGAGCACAGACA------------------TCCACCTAGGACCTCGTGTCCACCTAAAACCTGGTGTTCACCTGGGGCCTGGGTGACAACCTGGGATCTGATGTTCACCTGAGGCCCAGAGTTCAGCTGGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14170 164 + 30162 GCCTCAGCATCCACCAGGGCCTGATGTTCCCCAAAGGCCTAGATATCCACCTGAGGCCTGATGTCCACCTGGGGCCTGATGTCCACCTAATACTTGGTGTTTAGCTGGGGCCTGGGTGACATCCTGGGATCTGATGTTCAGCTGAGGGCCAGATTTCAGCTGGC i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 37215 146 - 323133 GCCTGAGTGTCCACTGGGGCCTGAGGTTCACCAGGAGCACAGACA------------------CCCACCTAGGACCTGGTGTCCACCTAATACCTGGTGTTTACCTAGAGCCTGGGTGACCACCTGGGATCTGATGTTCAGCTAAGGCCCAGAGTTCAACTGAT i cerAty1.NW_012003779v1 C 0 I 43 s chlSab2.chrUn_KE147573v1 20138 146 + 85383 GCCTGAGTGTCCACTGGGGCCTGAGGTTCACCAGGAGCACAGACA------------------TTCACCTAGGACCTGGTGTCCACCTAAAACCTGGTGTTCACCTAGGGCCTGGGTGACCACCTGGGATCTGATGTTCAGCTGAGGCCCAGAGTTCAGCTGGT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550143 146 - 854822 GCCTGAGTGTCCACTGGGGCCTGAGGTTCACCAGGAGCACAGACA------------------TCCACCTAGGACCTGGTGTCCACCTAATACCTGGTGTTCAACTAGGGCCTGGGTCACCACCTGGGATCTGATGTTCAGCTGAGGCCCAGAGTTCAGCTGGT i colAng1.NW_012118199v1 C 0 I 76 e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=10104.000000 s hg38.chr9_KI270719v1_random 99754 6 + 176845 GCCTA--T s panTro5.chr20 31459059 6 + 66533130 GCCTA--T i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568468 6 + 247869975 GCCTA--T i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75118 6 + 95358 GCCTA--T i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270492 8 + 1485088 GCCTATGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14334 6 + 30162 ACCTG--T i macFas5.chr9_KE145707_random C 0 I 2 s chlSab2.chrUn_KE147573v1 20284 6 + 85383 GCCTG--T i chlSab2.chrUn_KE147573v1 C 0 I 2 s colAng1.NW_012118199v1 550365 6 - 854822 GCCTG--T i colAng1.NW_012118199v1 I 76 C 0 e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 37361 43 - 323133 I a score=6876.000000 s hg38.chr9_KI270719v1_random 99760 2 + 176845 GT s panTro5.chr20 31459065 2 + 66533130 GT i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568474 2 + 247869975 GT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75124 2 + 95358 GT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270500 2 + 1485088 GT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14342 2 + 30162 GT i macFas5.chr9_KE145707_random I 2 C 0 s papAnu3.chrUn_NW_003880647v1 7998 2 + 19535 GT i papAnu3.chrUn_NW_003880647v1 N 0 I 217 s chlSab2.chrUn_KE147573v1 20292 2 + 85383 GT i chlSab2.chrUn_KE147573v1 I 2 C 0 s colAng1.NW_012118199v1 550371 2 - 854822 GT i colAng1.NW_012118199v1 C 0 I 2 e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 37361 43 - 323133 I a score=53540.000000 s hg38.chr9_KI270719v1_random 99762 29 + 176845 CAGCCTGGCACCTGATACACACGAGACGA s panTro5.chr20 31459067 29 + 66533130 CAGCCTGGCACCTGATGCACACGAGAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568476 29 + 247869975 CAGCCTGGCACCTGATGCACACAAGAGGA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75126 29 + 95358 CAGCCTGGCACCTGATGCACACAAGAGGA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270502 29 + 1485088 CAGCTTGGCACCTGATGCACATGAGAGGG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14344 29 + 30162 CAACCCAATGCCTGATGCACACCTGCAGA i macFas5.chr9_KE145707_random C 0 C 0 s chlSab2.chrUn_KE147573v1 20294 29 + 85383 CATCCTGGTACCTGATGCACATGAGAGGA i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550375 29 - 854822 CATCCTGGTACCCAATGCACTTGAGAGGA i colAng1.NW_012118199v1 I 2 C 0 e papAnu3.chrUn_NW_003880647v1 8000 217 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 37361 43 - 323133 I a score=120122.000000 s hg38.chr9_KI270719v1_random 99791 48 + 176845 CTAGGTGCCCACCTGAGGACTGGTGTTCATGGGGAAC-TGGTGTTCAGC s panTro5.chr20 31459096 48 + 66533130 CTAGGTGCCCACCTGAGGACTGGTGTTCATGGGGAAC-TGGTGTTCAGC i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568505 48 + 247869975 CTAGGTGCCCACCTGAGGACTGGTGTTCATGGGGAAT-TGGTGTTCAGC i panPan2.chr2B C 0 M 188 s gorGor5.CYUI01000801v1 75155 48 + 95358 CTAGGTGCCCACCTGAGGACTGGTGTTCATGGGGAAC-TGGTGTTCAGC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270531 48 + 1485088 CTAGGTGCCCACCTGAGGATTGATGTTCATGGGGAAC-TGGTGTTCAGC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14373 48 + 30162 TGAGGTATACACCTAGGGTCTGCTGTTCACTGGGGAC-AGGTGTCCAGC i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 37404 48 - 323133 CTAGGTGC-CACCTGACTGGCGGTTTTCATGGGGAACTGGGTGTTCAGC i cerAty1.NW_012003779v1 I 43 C 0 s chlSab2.chrUn_KE147573v1 20323 48 + 85383 CTAGGTGCCCACCTGAAGACTGGTGTTCATGTGGAAC-TGGTGTTCAGC i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550404 48 - 854822 CTAGGTGCCTACCTGAGTACTGGTGTTCATGTGGAAC-TGATGTTCAGC i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8000 217 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=34911.000000 s hg38.chr9_KI270719v1_random 99839 15 + 176845 TGTGGCTTGATGAGC s panTro5.chr20 31459144 15 + 66533130 TGTGGCTTGATGACC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000801v1 75203 15 + 95358 TGTGGCTTGATGAGC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270579 15 + 1485088 TGTGGCTTGATGACC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14421 15 + 30162 TGTGGCCTGGTGACC i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 37452 15 - 323133 TGTGGCTTGATGACC i cerAty1.NW_012003779v1 C 0 I 12 s chlSab2.chrUn_KE147573v1 20371 15 + 85383 TGTGGTTTGATGACC i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550452 15 - 854822 TGTGGCTTGATGACC i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8000 217 + 19535 I e panPan2.chr2B 132568553 188 + 247869975 M e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=22836.000000 s hg38.chr9_KI270719v1_random 99854 14 + 176845 AACTGGGTCCTGGT s panTro5.chr20 31459159 14 + 66533130 AACTGGGTCCTGGT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000801v1 75218 14 + 95358 AACTGGGTCCTGGT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270594 14 + 1485088 ACCTGGGTCCTGGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14436 14 + 30162 ACATGGGTCCTAGT i macFas5.chr9_KE145707_random C 0 C 0 s chlSab2.chrUn_KE147573v1 20386 14 + 85383 AACTGGGTCCTGAT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550467 14 - 854822 AACTGGGTCCTGAT i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8000 217 + 19535 I e panPan2.chr2B 132568553 188 + 247869975 M e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 37467 12 - 323133 I a score=135663.000000 s hg38.chr9_KI270719v1_random 99868 72 + 176845 GTCCTCCTGGCAACTGATGTCCACCTGGGACTTCATGCTTACCTAGGGCCTGGTGTTCCCCT-------GGGGCCTGGT s panTro5.chr20 31459173 72 + 66533130 GTCCTCCTAGAACCTGATGTCCACCTGGGACTGCATGCTTACCCAGGGCCTGGTGTCCCCCT-------GGGGCCTGGT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000801v1 75232 72 + 95358 GTCCTCCTGGCAACTGATGTCCACCTGGGACTTCATGCTTACCTAGGGCCTGGTGTTCCCCT-------GGGGCCTGGT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270608 72 + 1485088 GTCCTCCTGGCACCTGATGTCCACCTGGGACTGCATGCTTACCTAGGGCCTGGTGTTCCCCT-------GGGGCCTGGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14450 79 + 30162 GTTCATCAAGTGCCTGGTGTCCACCTGGGACTGGGTTTCCACCTGGGACCTGATGTTGGTGGCAGGGGGGAGGCCTGTT i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 37479 69 - 323133 GTCCTCCTGGCACCT-GTGTCCACCTGGGACTGCATGCTTACCTAGGGGCTGGTGTTGCCCT---------GGCCTGGT i cerAty1.NW_012003779v1 I 12 I 64 s chlSab2.chrUn_KE147573v1 20400 72 + 85383 GTCCTCCTGGCATCTGCTGTCCACCTGGGACTGCATGCTTACCTAGGGCCCGGTGTTCCCCT-------GGGGCCTGGT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550481 72 - 854822 GTCCTCCTGGTACCTGCTGTCCACTTGGGACTGCATGCTTACCTAGGGCCCAGTGTTCCCCT-------GGGGCATGGT i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8000 217 + 19535 I e panPan2.chr2B 132568553 188 + 247869975 M e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=8497.000000 s hg38.chr9_KI270719v1_random 99940 6 + 176845 GTGCCC s panTro5.chr20 31459245 6 + 66533130 GTGCCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000801v1 75304 6 + 95358 GTGCCC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270680 6 + 1485088 GTGTCC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14529 6 + 30162 GTGTAC i macFas5.chr9_KE145707_random C 0 C 0 s chlSab2.chrUn_KE147573v1 20472 6 + 85383 GTGCAC i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550553 6 - 854822 GTGCAC i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8000 217 + 19535 I e panPan2.chr2B 132568553 188 + 247869975 M e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 37548 64 - 323133 I a score=29284.000000 s hg38.chr9_KI270719v1_random 99946 15 + 176845 CTGAGATCTGGGGTC s panTro5.chr20 31459251 15 + 66533130 CTGAGACCTGTGATC i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568742 15 + 247869975 CTGAGACCTGGGGTC i panPan2.chr2B M 188 C 0 s gorGor5.CYUI01000801v1 75310 15 + 95358 CTGAGATCTGGGGTC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270686 15 + 1485088 CTGAGACCTGGGGTC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14535 13 + 30162 TTGAGATGTGGGG-- i macFas5.chr9_KE145707_random C 0 C 0 s chlSab2.chrUn_KE147573v1 20478 15 + 85383 CTGAGACCTGGGGTC i chlSab2.chrUn_KE147573v1 C 0 I 18 s colAng1.NW_012118199v1 550559 15 - 854822 CTGAGACCTGGGGTC i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8000 217 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 37548 64 - 323133 I a score=14949.000000 s hg38.chr9_KI270719v1_random 99961 8 + 176845 CACCTGGG s panTro5.chr20 31459266 8 + 66533130 CTCCTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568757 8 + 247869975 CACCTGGG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75325 8 + 95358 CACCTGGG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270701 8 + 1485088 CACCTGGG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14548 1 + 30162 -------G i macFas5.chr9_KE145707_random C 0 I 1 s papAnu3.chrUn_NW_003880647v1 8217 8 + 19535 CACTTGTG i papAnu3.chrUn_NW_003880647v1 I 217 I 4626 s chlSab2.chrUn_KE147573v1 20511 8 + 85383 CACTTGTG i chlSab2.chrUn_KE147573v1 I 18 C 0 s colAng1.NW_012118199v1 550574 8 - 854822 CACTTGGG i colAng1.NW_012118199v1 C 0 I 18 e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 37548 64 - 323133 I a score=31302.000000 s hg38.chr9_KI270719v1_random 99969 16 + 176845 CCTAGTATCCACTTGG s panTro5.chr20 31459274 16 + 66533130 CCTAGTATCCACTTGG i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568765 16 + 247869975 CCTAGTATCCACTTGG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75333 16 + 95358 CCTAGTATCCACTTGG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270709 16 + 1485088 CCTAGTATCCACTTGG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s chlSab2.chrUn_KE147573v1 20519 16 + 85383 CCTAGTATTCACTTGG i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550600 16 - 854822 CCTAGTATCCACTTGG i colAng1.NW_012118199v1 I 18 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 37548 64 - 323133 I e macFas5.chr9_KE145707_random 14549 1 + 30162 I a score=107267.000000 s hg38.chr9_KI270719v1_random 99985 41 + 176845 GGCCTCATATCCATCTGGAACATCAT---GTCCACTTGGGGCCT s panTro5.chr20 31459290 41 + 66533130 GGCCTCATATCCATCTGGAACATCAT---GTCCACTTGGGACCT i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568781 41 + 247869975 GGCCTCATATCCATCTGGAACATCAT---GTCCACCTGGGGCCT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75349 41 + 95358 GGCCTCATATCCATCTGGAACATCAT---GTCCACTTGGGGCCT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270725 41 + 1485088 GGCCTCATATCCATCTGGAACATCAT---GTCCACTTGGGGCCT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14550 32 + 30162 ---------TCCACCTGGGACCTGAT---GTCCACCTTGGGCCT i macFas5.chr9_KE145707_random I 1 C 0 s cerAty1.NW_012003779v1 37612 43 - 323133 GGCCTCAT-ATCATCTGGATTCCCATTGGGTCCACTTGGGGCCT i cerAty1.NW_012003779v1 I 64 I 43 s chlSab2.chrUn_KE147573v1 20535 41 + 85383 GGCCTCATATCCATCTGGAACATCAT---GTCCACTTGGGGCCT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550616 41 - 854822 GGCCTCATATCCATCTGGAACATCAT---GTCCACTTGGGGCCT i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=69821.000000 s hg38.chr9_KI270719v1_random 100026 37 + 176845 TGTAGTTACCTAGGGACTGGGTGTCCTTCTGGCACTT s panTro5.chr20 31459331 37 + 66533130 TTTAGTTACCTAGGGACTGGGTGTCCTTCTGGCGCTT i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568822 37 + 247869975 TGTAGTTACCTAGGGACTGGATGTCCTTCTGGCACTT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75390 37 + 95358 TGTAGTTACCTAGGGACTGGGTGTCCTTCTGGCACTT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270766 37 + 1485088 TGTAGTTACCTAGGGGCTGGGTGTCCTTCTGGCACTT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14582 37 + 30162 TGTATTTACGTATGGCCTGGGGAGTCACCCAGAGCTT i macFas5.chr9_KE145707_random C 0 C 0 s chlSab2.chrUn_KE147573v1 20576 37 + 85383 TGTCGTTACCTAGAGACTGGGTGTCCTCCTGGTGCTT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550657 37 - 854822 TGTCATTACCTAGGGACTGGGCATCCTCCTGGTGCTT i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 37655 43 - 323133 I a score=281189.000000 s hg38.chr9_KI270719v1_random 100063 111 + 176845 GGGTGTCCTCCTGGGGCCTGGGGTTCTCCTGGGGCCTGGGTGTACATCTCTGGCCT-GATGTCCACCTTGGG-TGGATGTCCACCTGGGGACAGATG-TTCACTTGTGGCTTGA s panTro5.chr20 31459368 112 + 66533130 GAGTGTCCTCCTGGGGCCTGGGGTTCTCCTGGGGCCTGGGTGTACATCTCTGGCCT-GATGTCCACCTTGGGATGGATGTCCATCTGGGAACAGATG-TTCACTTGTGGCCTGA i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568859 112 + 247869975 GAGTGTCCTCCTGGGGCCTGGGGTTCTCCTGGGGCCTGGGTGTACATCTCTGGCCT-GATGTCCACCTTGGGATGGATGTCCACCTGGGGACAGATG-TTCACTTGTGGCCTGA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75427 111 + 95358 GGGTGTCCTCCTGGGGCCTGGGGTTCTCCTGGGGCCTGGGTGTACATCTCTGGCCT-GATGTCCACCTTGGG-TGGATGTGCACCTGGGGACAGATG-TTCACTTGTGGCTTGA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270803 111 + 1485088 GAGTGTCCTCCTGGGGCCTGGAGTTCTCCTGGGGCCTGGGTGTACATCTCTGGCCT-GATGTCCACCTTGGGATGGATGTCCACCTGGG-ACAGATG-TTCACTTGTGGCCTGA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 14619 94 + 30162 AAGTGTACCCTTG------------------GGGCTTGGGTATATATATGTGGCCT-GATGTCCATTTTGGGACAGATGTCTACCTGGGGACATACG-TTCATGTGGGGCCtga i macFas5.chr9_KE145707_random C 0 I 2569 s cerAty1.NW_012003779v1 37698 110 - 323133 GAGTGTCTTCCTG--GCCTGTAGTTTCTCCTGGGCCTGGGTGTACATCTCTGGCCTGGATGTCTACCTGGGGATGGATGTC-ACCTGGGGAACGATGTTTCACTTGTGGCCTG- i cerAty1.NW_012003779v1 I 43 C 0 s chlSab2.chrUn_KE147573v1 20613 112 + 85383 GAGTGTCCTCCAGGGGCCTGTAGTTCTCCTGGGGCCTGGGTGTACATCTCTGGCCT-GATGTCCACCTTGGGATGGATGTCCGCCTGGGGACAGATG-GTCACTTGTGGCCTGA i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550694 112 - 854822 GAGTGTCCTCCAGGGGCCTGTAGTTCTCCTGGGGCCTGGGTGTATATCTCTGGCCT-GATGTCCACCTTGGGATGGATGTCCACCTGGGGACAGATG-TTCACTTGTGGCCTGA i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=728630.000000 s hg38.chr9_KI270719v1_random 100174 249 + 176845 GTGTCCATCTCGTGTCTAATGTCTACCTGGGGCCTGGT-GTTTGCCTGAGGCCTTATATCCACCTGGGGCCTGGGCATCCATTTGAGGCCTGATGTCTACCTAAGACCTGGTGTTTAACTGGGGCACAGACTTCTTCCTGGAGCCTGACGTTCATCTGGAGCCTGAAGTTCACCTGTGCTTGTTGTCTACCTGAGGCCTATGTGTCAACCTAGTGCCTGATGACCACCCTGAGTTCAGTGTTCACCTGGG s panTro5.chr20 31459480 249 + 66533130 GTATCCATTTTGCGTCTAATGTCTACCTGGGGTCTGGT-GTTTGCCTGAGGCCTTATATCCACCTGGGGCCTGGGCATCCATTTGAGGCCTGATGTCTACCTAAGACCCGGTGTTTAACTGGGGCACAGACTTCTTCCTGGAGCCCGACGTTCATCTTTAGCCTGAAGTTCACCTATGCCTGTTGTCTACCTGTGGCCTATGTGTCAACCTAGGGCCTGATGACCACCCTGAGTTCAGTGTTCACCTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132568971 249 + 247869975 GTGTCCATTTCGTGTCTAATGTCTACCTGGGGCCTGGT-GTTTGCCTGAGGCCTTATATCCACCTGGGGCCTGGGCATCCATTTGAGGCCTGATGTCTACCTAAGACCCAGTGTTTAATTGGGGCACAGACTTCCTCCTGGAGCCCAACATTCATCTAGAGCCTGAAGTTCACCTATGCCTGTTGTCTACCTGAGGCCTATGTGTCAACCTAGGGCCTGATGACCACCCTGAGTTCAGTGTTCACCTGGG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75538 249 + 95358 GTGTCCATCTCGTGTCTAATGTCTACCTGGGGCCTGGT-GTTTGCCTGAGGCCTTATATCCACCTGGGGCCTGGGCATCCATTTGAGGCCTGATGTCTACCTAAGACCCGGTGTTTAACTGGGGCACAGACTTCTTCCTGGAGCCCGACGTTCATCTGGAGCCTGAAATTCACCTGTGCCTGTTGTCTACCTGAGGCCTATGTGTCAACCTAGTGCCTGATGACCACCCTGAGTTCAGTGTTCACCTGGG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 270914 249 + 1485088 GTGTCCATCTCGTGTCTAATGTCTACCTGGGGCCTGGT-GTTTGCCTGAGGCCTTATATCCACCTGGGGCCTGGGCATCCATTTGAGGCCTGATGTCTACCTAAGACCTGGTGTTTAATTGGGGCACAGACTTCTTCCTGGAGCCCGATGTTCATCTGGAGCCTGAAGTTCACCTATGCCTGTTGTCTACCTGAGGCCTATGTGTCAACCTAGGGCCTGATGACCACCCTGAGTTCAGTGTTCACCTGGG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 17282 249 + 30162 gtGTCCACCTGGTGTCTAATGTCTAACTGGGGCCTGGT-GTTTCTCTGAGGCCTTATATCCATCTGGGGCCTGGGCATCCATTTGAGGCCTGATGTCTACCTAAGACTTGGTGTTTAATTGGGGCACAGATTTCTTCCTGGAGCCTGATGTTCATATGGAGCCTGAAGTTCACCTGTGCCTGTTGTCTACCTGAGGTCTATGTGTCAACCTGGGGCCTGATGACCACCTTGAGTTCAGTGTTCACCTGGG i macFas5.chr9_KE145707_random I 2569 C 0 s cerAty1.NW_012003779v1 37808 246 - 323133 GAGCCTACCTGGTGTCTAATGTCTAACTGGCGCCTGGTGGTTTCTCTGAGGCCTTATATTCATCTGGGGCCTGGGCATCCATTTGAGGCCTGA-GTCTACCTAAGACTTGGTGTTTAATTGGGGCACAGATTTCTTCCTGGAGCCTGATGTTCATATGGAGCCTGAAGTTCACCTGTGCCTGTTGTCTACCTGAGGCCTATGGGTCAACCTGGG--CTGATGACACCCTTGAGTTCAGTGTTT-CCTGGG i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 20725 244 + 85383 GTATCCACCTAGGGTCTAATGTCTACCTGGGGCCTGGT-GTTTCTCTGAGACCTTATATGCATCTGCGGCTTTGACATCCATTTGAGGCCTGATGTCTACCTAAGACTTGGTGTTTAATTGGGGCATAGATTTCTTCCTGGAGCCTGATGTTCATCTGGAGCCTGAAGTTCACCTATGCTTGCTGTCTACCTGAGGTCTATGTGTCAACCTGGGGCCTGATGACCACCTTG-----AGTGTTCACCTGGG i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 550806 249 - 854822 GTGTCCACCTGGTGTCTAATATCTACCTGGGGCCTGGT-GTTTCTCTGAGGCCTTATATCCATCTGGGGCCTTGGTATCCATTTGAGGCCTGATGTCTACCTAAGACTTGCTGTTTAATTGGGGCACAGATTTCTTCCTGGAGCCCGATGTTCATATGGAGCCTGAAGTTCACTTATGCCTGTTATCTACCTGAGGCCGATGTGTCAACCTGGGGCCTGATGACCACCTTGAGTTGAGTGTTCACCTGGG i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=29047.000000 s hg38.chr9_KI270719v1_random 100423 8 + 176845 GCCTGACA s panTro5.chr20 31459729 8 + 66533130 GCCTGACA i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132569220 8 + 247869975 GCCTGACA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75787 8 + 95358 GCCTGACA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 271163 8 + 1485088 GCCTGACA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 17531 8 + 30162 GCCTGACG i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 38054 8 - 323133 GCCTGACG i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 20969 8 + 85383 GCCTGATG i chlSab2.chrUn_KE147573v1 C 0 C 0 s nasLar1.chrUn_JMHX01000402v1 6129 8 + 11547 GCCTGATG i nasLar1.chrUn_JMHX01000402v1 N 0 N 0 s colAng1.NW_012118199v1 551055 8 - 854822 GCCTGATG i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=1162707.000000 s hg38.chr9_KI270719v1_random 100431 374 + 176845 TCTGTCTGGAGTCTGGGTGTCCACATAGGGCCTGATGTTGGCTTGGGACCAAAGTATTTACCTAGGGCCTGGGTGTCTACTTACAGCCTGACTTCTACATGGTTCATTGTGTCAACCTGGGGCCTGATGTCCACTTAGGTCCTAGGTAAGCTCCTTATGACTAAAGTCCACATGGGGGCTGAAACCATCTCAGACCTTG----AACCTAGGGCTTAGTGTCGACCTGAG-----------ACCTGGTGACCCCCTGGGGTCAAGGTATCCACCTTGGGCCTGATGACCAACTGGGGTTTAAGGATCTACCTAGAGACTGGTGTCAACCTGGAACCTGATGTCCACTTGGGGTCTGGTGTACACCTTGGGCCTGATGCCCACCTTGGCAC s panTro5.chr20 31459737 389 + 66533130 TCTGCCTGGAGTCTGGGTGTCCACATAGGGCCTGATGTTGGCTTGGAACCAAAGTATTTACCTAGGGCCTGGGTGTCTGCTTAGAGCCTGACTTCTACATGGTTCATTATGTCAACCTGGGGCCTGATGTCCACTTAGGGCCTAGGTAAGCTCCTTATGACTAAAGTCCACACGGGGGCTGAAACCATCTCAGACCTTGTGTTAATCTTGGGCTTAGTGTCCACCTGAGGCCTGCCTGGGACCTGGTGACCCCCTGGGGTCAAGCTATCCACCTTGGGCCTGATGACCAATTGGGGCTTAAAGCTCTACTTAGAGACTGGTGTCAACCTGGAACCTGATGTCCACTTGGAGTCTGGTGTACACCTTCGGCCTGATGCCCACCTTGGCAC i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132569228 388 + 247869975 T-TGCGTGGAGTCTGGGTGTCCACATAGGGCCTGGTGTTGGCTTGGGACCAAAGTATTTACCTAGGGCATGGGCATCTACTTAGAGCCTGACTTCTACATGGTTCATTGTGTCAACCTGGGACCTGATGTCCACATAGGGCCTAGGTAAGCTCCTTATGACTAAAGTCCATATGGGGTCTGAAACCATCTCAGACCTTGTGTTAACCTAGGGCGTGGTGTCCACCTGAGGCCTGCCTGGGACCTGGTGACCCCCTGGGGTCAAGGTATCCACCTTGGGCCTGATGACCAATTGGGGCTTAAGGATCTACCTAGAGACTGGTGTCAACCTGGAACCTGATGTCCACTTGGGGTCTGGTGTACACCTTGGGCCTGATGCCCACCTGGGCAT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 75795 374 + 95358 TCTGCCTGGAGTCTGGGTGTCCACATAGGGCCTGATGTTGGCTTGGGACCAAAGTATTTACCTAGGGCCTGGGTGTCTACTTACAGCCTGACTTCTACATGGTTCATTGTGTCAACCTGGGGCCTGATGTCCACTTAGGGCCTAGGTAAGCTCCCTATGACTAAAGTCCACATGGGGGCTGAAACCATCTCAGACCTTG----AACCTAGGGCTTAGTGTCAACCTGAG-----------ACCTGGTGACCCCCTGGGGTCAAGGTATCCACCTTGGGCCTGATGACCAACTGGGGTTTAAGGATCTACCTAGAGACTGGTGTCAACCTGGAACCTGATGTCCACTTGGGATCTGGTGTACACCTTGGGCCTGATGCCCACCTTGGCAC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 271171 388 + 1485088 TCTGCCTGGAGTCTGGGTGTCCACATAGGGCCTGATGTTGGCTTGGGACAAAAGTATTTACCTAGGGCCTGGGTGTCTACTTAGAGCCTGACTTCTACATGGTTCATTGTGTCAACCTGGGGTCTGATGTCCACTTAGGGCCTAGGTAAGCTCCTTATAACTAAAGTCCACATGGGGGCTGAAACCATCTCAGACCTTGTGTTAACCTAGGGCTTAGTGTCCACCTGAGGTCTGCTTGGGACCTGGTGACCCCCTGGGGTCAAGGTATCCACCTTGGGCCTGATGACCAATTGGGGTTTAAGGATCTACCTAGAGCCTGGTGTCAACCTAGAACCTGATGTCCACTTGGGGTCTGGTGTACACCTTTGGCCTGATG-CCACCTGGGCAC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 17539 389 + 30162 TCTGCCTGGAGTCTGGGTGTCCACATAGGGCCTGATGTTGGCTTGGGACTGAAGTATTTACCTAGGGCCTGGGTGTCTACTTAGAGCCTGACTTCTACCTGGTTCAGTGTGTCAACCTGGGGCCTGATGTCCACTTAGGGCCTAGGTAAGCTCCTTATGACTAAAGTCCACATGGGGGCTGAAACCATGTCAGATCTTGTGTTAACCTAGGGCCTAGTGTCTACCTGGGGCCTGCCTGTGACCTGGTGACCCCCTGGGGTCAAGATATCCACCTTGGGCCTGATGACCAATTGGGGCTTAAGGATCTACCTAGAGACTGGTGTCAATTTGGAGCCTGATGTCCACTTGGGGTCTGGTGTACACCTTGGGCCTGATGTCCACCTGGGCAT i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 38062 389 - 323133 TCTGCCTGGAGTCTGGGTGTCCACATAGGGCCTGATGTTGGCTTGGGACTGAAGTATTTACCTAGGGCCTGGGTTTCTACTTAGAGCCTGACTTCTACCTGGTTCATTGTGTCAGCCTGGGGCCTGATGTCCACTTAGGGCCTAGGTAAGCTCCTTATGACTGAAGTCCACATGGGGGCTGAAACTATGTCAGATCTTGTGTTAACCTAGGGCCTAGTGTCCACCTGGGGCCTGCCCGTGACCTGGTGACCCCCTGGAGTCAAGGTATCCACCTTGGGCCTGATGACCAATTGGGGCTTAAGGATCTACCTAGAGACTGGCATCAACCTGGAGCCTGATGTCCACTTGGGTTCTGGTGTACACCTTGGGCCTGATGTCCACCTGGGCAC i cerAty1.NW_012003779v1 C 0 T 9487 s chlSab2.chrUn_KE147573v1 20977 389 + 85383 TCTACCTGGAGTCTGGGTGTCCACAAAGGGCCTGATGTTGACTTGGGACTGAAGTATTTACCTAGGGCCTGGGTTTCTACTTAGAGCCTGACTTCTACCTGGTTCATTGTGTCAACCTGGGGCCTGATGTCCACTTAGGGCCTAGGTAATGTCCTTATGACTAAAGCCCACATGGGGGCTGAAACCCTCTCAGACCTTGTGTTAACCTAGGGCCTAGTGTCCACCTGGGACCTGCCTGCAACCTGGTGACCCCCTGGGGTCAAGGTATCCACCTTGGGCCTGATGACCAACTGGGGCTTAAGGATCTACCTAGAGACTAGTGTCAACCTGGAACCTGATGTCCACTTGGGGTCTGGTGTACACCTTGGGCCTGATGTCCACCTGGGCAC i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 551063 389 - 854822 TCTGCCTGGAGTCTGGGTGTCCACATAAGGCCTGATGTTGGCTTGGGACTGAAGTCTTTACCTAGGGCCTGGGTTTCTACTTAGAGTCTGACTTCTACCTGGTTCATTGTGTCAACCTGGGGCCTGATGTCCACTTAGGGCCTAGGTAAGCTCCTTATGACTAAAGTCCACATGGGGGCTGAAACCCTCCCAGACCTTGTGTTACCCTAGGGCCTGGTGTCCATCTGGGGCCTGCCTGCGACCTGGTGAAGCCCTGGGGTCAAGGTATCCACCTTGGGCTTGATGACCAATTGGGGCTTAAGGATCTATCTAGAGACTGGTGTCAACCTGGAACCTGATGTGCACTTGGGGTCTGGTGTACACCTTGGGCCTGATGTCCACCTGGGCAT i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=865101.000000 s hg38.chr9_KI270719v1_random 100805 303 + 176845 AGGTGTACACTTTGGGCCTAGTGTGCACCTGAAGCCTGGCTGTCAACCTGGGTCTTGATGCACACCTTTAGTCAAGTGTTAAACTGGGGCCTGATGAAATACTGGAGCCTGATTTACACCTGTGTACTGGGTCTCCACCTGGGGCCTGATGTCCACCTGCAGCCAGATATCCACCTGGCACCAGATGTCTTTGAGGAATCTGGGTGTCCACCTTGAAAATGATGTATTCCAAGAGACTAGGCATGCACATTGGGCCTGGGGTGCACCTAGGTCCTGATGTCTACCTGAGGCTGGTATTGAGCT s panTro5.chr20 31460126 303 + 66533130 AGGTGTACAATTTGGGCCTAGTGTGCACCTGAAGCCTAGGTGTCAACCTGGGTCTTGATGCACACCTTTAGTCAAGTGTTTAACTGGGGCCTGATGAAATACTGGAGCCTGATTTACACCTGTGTACTGGGTCTCCACCTGGGGCCTGATGTCCACCTGCAGCCAGATATCCACCTGGCATCAGATGTCTACGAGGAATCTGGGTGTCCACCTTGAAAATGATGTATTCCAAGAGACTAGGCATGCACATTGGGCCTGGGGTGCACCTGGGTCCTGATGTCTACCTGAGGCTGGTATTGAACT i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132569616 303 + 247869975 GGGTGTACACTTTGGGCCTAGTGTGCACCTGAAGCTTGGGGGTCAACCTGGGTCTTGATGCGCACCTTTAGTCAAGTGTTTAACTGGGGCCTGATGAAATACTGGAGCCTGATTTACAGCTGTGTACTGGGTCTCCACCTGGGGCCTGATGTCCACCTGCAGCCACATATCCACCTGGCACCAGATGTCTACCAGGAATCTCGGTGGCCACCTTGAAAATGATGTATTCCAAGAGACTAGGCATGCACATTGGGCCTGGGGTCCACCTGGGTCCTGATGTCTACCTGAGGCTGGTATTGAACT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 76169 303 + 95358 AGGTGTACACTTTGGGCCTAGTGTGCACCTGAAGCCTGGCTGTCAACCTGGGTCTTGATGCACACCTTTAGTCAAGTGTTAAACTGGGGCCTGATGAAATACTGGAGCCTGATTTACACCTGTGTACTGGGTCTCCACCTGGGGCCTGATGTCCACCTGCAGCCAGATATCCACCTGGCACCAGATGTCTTTGAGGAATCTGGGTGTCCACCTTGAAAATGATGTATTCCAAGAGACTAGGCATGCACATTGGGCCTGGGGTGCACCTGGGTCCTGATGTCTACCTGAGGCTGGTATTGAACT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 271559 303 + 1485088 AGGTGTACACTTTGGGCCTGGTGTGCACCTGAAGCCTGGGTGTCAACCTGGGTCTTGATGCACACCTTTAGTCAAGTGTTTAACTGGGGCCTGATGAAATACTGGAGGCTGATTTATACCTGTGTACTGGGTCTCCACCTGGGGCCTGATATCCACCTTCAGCCAGATATCCACCTGGCACCAGATGTCTACCAGGAATCTGGGTGTCCACCTTGAAAGTGATGTATTCCAAGAGACTAGGCATGCACATTGGGCCTGGGGTCCACCTGGGTCCTGATGTCTACCTGAGGCTGGTATTGAACT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 17928 292 + 30162 GGGTGTACACTTTGGGCCCAGTGTGCCCCTGAAACCTGGGTGTCAACCTGGGTCTTGATGCACACCTTTAGTCAAGTGTTTAACTGGGGCCTGATGAAATAGTGGGGCCTGATTTACACCTGTAGACTGGGTATCCACCTGAGGCCTGATGTCCACCTGCAGCCAGATGTCCACCTGGCACCAGATATCTACTTGGAGTCT-GGTCTTTGCCTTGAACATGACGTATTCCAAGAGACTAGGCATGCACATTGGGCCTGGGG----------TCCTGATGTCTACCTGAGGCTGGTATTGAACT i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 28964 292 - 323133 GGGTGTACACTTTGGGCCCTGTGTGCCCCTGAAACCTGGGTGTCAACCTGGGTCTTGATGCACACCTTTAGTCAAGTGTTTAACTGGGGCCTGATGAAATACTGGGGCCTGATTTACACCTGTAGACTGGGTATCCGCCTGAAGCCTGATGCCCACCTGCAGCCAGATGTCCACCTGGCACCAGATGTCTACCTGGAGTCT-GGTTTTCACCTTGAACATGATGTATTCCAAGAGACTAGGCATGCACATTGGGCCTGGTG----------TCCTGATGTCTACCTGAGGCTGGTATTGAACT i cerAty1.NW_012003779v1 T 9487 I 13274 s chlSab2.chrUn_KE147573v1 21366 285 + 85383 GGGTGTACACTTTGGGTCAAGTGTGCCCCTGAAGCCTGAGCGTCAAGCTGGGTCTTGATGCACACTTTTAGTCAAGTGTTTAAC------------------TGGGGCCTGATTTACACCTGTAGACTGGGTATCCACCTGGGGACTGATGCCCACTTGCAGCCAGATGTCCACCTGGCACCAAATGTCTACCTGGAGTCTGGGTGTCCACCTTGAACATGATGTATTCCAAGAGACTAGGCATGCACATTTGGCCTGGGGTCCCCCTGGTTCCTGATATCTACCTGAGGCTGGTATTGAACT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 551452 303 - 854822 GGGTATACACTTTGGGCCCAGTGTGCCCCTGAAGCTTGAGTGTCAAGCTGGGTCTTGATGCACACCTTTAGTCAAGTGTTTAACTGGGGCCTGATGAAATACTAGGGCCTGATTTACACCTGTAGACTGGGTATCCACCTGGAGCCTGATGCCCACCTGCAGCCAGATGTCCACCTGGCACCAGATGTCTACCTGGAATCTGGGTGTCCACCTTGAACATGATGTATTCCAAGAGACTAGGCATGCACATTAGGCCTGGAGTCTACCTGGTTCCTGATATCTACCTGAAGCTGGTATTGAACT i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=342467.000000 s hg38.chr9_KI270719v1_random 101108 150 + 176845 GGGGCCTGTGTGTTCACTTGGAGCCTGATGTTCATTTGGAACCTGGTGTTCACCTAGGACATGGGTATCCACATGGATCCTGATTTTCAGGTGGGGAGTGGATATAGATCTGGGACCTGATGGCCACCTATGCTATAAGTAACCCA-ACCA s panTro5.chr20 31460429 150 + 66533130 GGGGCCTGTGTGTTCACTTGGAGCCTGATGTCCATTTGGAACCTGGTGTTCACCTAGGACATGTGTATCCACCTGGATCCTGATTTTCAGGTGGGGAGTGGATATAGACCTGGGATCTGATGGCCACCTATGCTATAAGTAACCCA-ACCA i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132569919 151 + 247869975 GGGGCCTGTGTGTTCACTTGGAGCCTGATGTTCATTTGGAACCTGGTGTTCACCTAGAACATGGGTATCCACCTGGATCCTGATTTTCAGGTGGGGAGTGGATATAGACCTGGGACCTGATGGTCACCTATGCTATAAGTAACCCACCCCA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 76472 150 + 95358 GGGGCCTGTGTGTTCACTTGGAGCCTGATGTTCATTTGGAACCTGGTGTTCACCTAGGACATGGGTATCCACCTGGATCCTGATTTTCAAGTGGGGAGTGGATATAGACCTGGGAACTGATGGCCACCTATGCTATAAGTAACCCA-ACCA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 271862 139 + 1485088 GGGGCCTGTGTGTTCACTTGGAGCCTGATGTTCATTTGGA-----------ACCTAGGACATGGGTATCCACCTGGATCCTGATTTTCAGGTGGGGAGCGGATATAGACCTGGGACCTGATGGCCACCTATGCTATAAGTAACCCA-ACCA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 18220 150 + 30162 GGGGCCTGTGTGTTCACTTGGAGTCTGATGTTCATTTGGAACCTGGTGTTCACTTAGGACATGGGTATCCACCTGGATCCTGATTTTCAACTGGGGAGTGGATATAGACCTGGGACCTGATGGCCACCTATGGTATATGTAACCTA-ACCA i macFas5.chr9_KE145707_random C 0 C 0 s chlSab2.chrUn_KE147573v1 21651 150 + 85383 GGGGCCTGTGTGTTCACTTGGAGCCCAATGTTCATTTGGAACCTGGTGTTCACTTCTGACGTGGGTATCCATCTGGATCCTGATGTTCATCTGGGGAGTGGATATAGACCTGGGACCTGATGGCCACCTATGGTATATGTAACCCA-ACCA i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 551755 150 - 854822 GGGGCCTGTGTGTTCACTTGGAGCCCGATGTTCATTTGGAACCTGGTGTTCACTTCTGATGTGGGTATCCACCTGGATCCTGATGTTCAGCTGGGGAGTGGATGTAGACCTGGAACCTGATGGCCACCTATGGTATATGTAACCCA-ACTA i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e cerAty1.NW_012003779v1 29256 13274 - 323133 I a score=1247049.000000 s hg38.chr9_KI270719v1_random 101258 414 + 176845 CCTGAGGCCTGATGTTCACCTGCAGCCTGATATCCACCTGGTACCTGTGTGTCAATCTAGTGCCTGGTGTCCAGTTGAGGACTAGGCAGACACCTGGGGCTTGGCGTTCACCAGGGGCCTGGTGTTCATCTTGCACCCAGTGTCCACCTGGACCCTGTGTATCAACCTGTGGCCTAGGTGGCCACT-GTAGCTTTATGTGCACCTGGGGCCTGAGAGTTTCCTAGGATCTGATGACCACTGGGGCCCAGGT-------------ATCCACCTGGGATATCAGGCTTCAAGTGTACACCCAGGCTCCATGTGGACACCAGGCCAGGAGAATGCCAGCCCTTATCTGAACATCAGGTCCTAGATAGACGCCCAGGCTCCATATGTACATCAGGCCCCAGGTATACACTGGACTCCAGGTGGACACCA-CAC s panTro5.chr20 31460579 416 + 66533130 CCTGAGGCCTGATGTTTACCTGCCGCCTGATATCCACCTGGTACCTGTGTGTCAATCTAGTGCCTGGTGTTCACCTGAGGACTAGGTAGACACCTGAGGCTTGGTGTTCACCAGGGTCCTGGTGTTCATCTTGCACCCAGTGTCCACCTGGACCCTGTGTATCAACCTGTGGCCTAGGTGGCCACTTGGAGCTTTATGTGCACCTGAGGCCTGAGAGTTTCCTAGGATCTGATGACCACTGGGGCCCAGGT-------------ATCCACCTGGGACATCAGGCTCCAAGTGTATATCCAGGCTCCATATGGACACCAGGCCAGGAAAACGCCAGCCTTTATCTGAATATCAGGTCCTAGATGGATGCCCAGGCCCCATGTGTACATCAGGCCCCGGGTATACACTGGACTCCAGGTGGACACCAGCAC i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132570070 415 + 247869975 CCTGGGGCCTGGTGTTCACCTGCGGCCTGATATCTACCTGGTACCTGCGTGCCAATCTAGTCCATGGTGTCCACTTGAGGACTAGGTAGACACCTGGGGCTTGGTGTTCACAAGGGGCCTGGTATTCATCTTGCACCCAGTGTCCACCTGGAAACTGTGTATCAAACTGTGACCTAGGTGGCCACT-GTAGCTTTATGTGCACCTGGGGCCTGAGAGTTTCCTAGGATCTGATGACCACTGGGGCCCAGGT-------------ATCCACCTGGGACATCAGGCTCCAAGTGTACACCCAGGCTCCATATGGACACCAGGCCAGGAGAACATCAGCCCTTATCTGAACATCAGGTCCTAGATGGACACCCAGTCCCCATGTGTACATCAGGCCCCAGGTATACACTGGACTCCAGGTGGACACCAGCAC i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 76622 416 + 95358 CCTGGGGCCTGGTGTTCACCTGCAGCCTGATATCCACCTGGTACCTGTGTGTCAATCTAGTGCCTGGTGTCCACTTGAGGACTAGGCAGACACCTGGGGCTTGGTGTTCACCAGGGGCCTGGTGTTCATCTTGCACCCAGTGTCCACCTGGACCCTGTGTATCAACCTGTGGCCTAGGTGGCCACTTGGAGCTTTATGTGCACCTGGGGCCTGAGAGTTTCCTAGGATCTGATGACCACTGGGGCCCAGGT-------------ATCCACCTGGGATATCAGGCTTCAAGTGTACACCCAGGCTCCATGTGGACACCAGGCCAGGAGAACGCCAGCCCTTATCTGAACATCAGGTCCTAGATGGACGCCCAGGCTCCATGTGTACATCAGGCCCCAGGTATACACTGGACTCCAGGTGGACACCAGCAC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 272001 416 + 1485088 CCTGGGGCCTGGTGTTCACCTGCGGCCTGATAGCCACCTGGTACCTGTGTGTCAATCTAGTGCCTGGTGTCCACTTAAGGACTAGGTAGACACCTGGGGCTTGGTGTTCACCAGGGGCCTGGTGTTCATCTTGCACCCAGTGTCCACCTGGACCCTGTGTATCAACCTGTGGCCTAGGTGGCCACTTGGAGCTTTGTGTGCACTTGGGGCCTGAGAGTTTCCTAGGATCCAATGACCACTGGGGCCCAGGT-------------ATCCACCTGGGACATCAGGCTCCAAGTGTATACCCAGGCTCCATGTGGACACCAGGCCAGGAGAATGCCAGCCCTTATCTGAACATCAGGTCCTAAGTGGATGCTCAGGCCCCATGTGTACATCAGGCCCCAGGTATACACTGGACTCCAGGTGGACACCAGCAT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 18370 416 + 30162 CCTGGGGCCTGGTGTTCACCTGAGGCCTGATATCCACCTGGTACCTGTGTGTCAATCTAGTGCCTGGTGTCTGCTTGAAAACTAGGTAGACACCTGGGCCTTGGTGTTCACCTGGGGCATGGTGTTCATCTTGCACCAAGTGTCCACCTGGATCCTGTGAATCAACCTGTGGCCTACGTGGCCACTTGGAGCTTTATGTGCACCTGCGGCCTGAAAGTTTCCTAGGATCTGATGACCACTGGGGCCCAGGT-------------ATCCACGTGGGGCATCAGGCTCCAGGTGTACACCCAGGCTCCATGTGGACACCAGGCCAGGAGAACTCCAGCCCTTATCTGAACATCAGGTCCTAGGTAGATGGCCAGGCCCCATGTGTACAGCAGGCCCCAGGTATGCACTGGACTCCAGGTGGACACCAGCAT i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 42530 429 - 323133 CCTGAGGGCTGGTGTTCACCTGGGGCCTGATATCCACCTGGTACCTGTGTGTCAATCTAGTGCCTGGTGTCCACTTGAGGACTAGGTAGACACCTGAGGCTTGGTGTTCACCTGGGGCCTGGTGTTCATCTTGTACTCAGTGTCCACCTGGAACCTGCATATCACCCTATGGCCTAGGTGGCCACTTGGAGCTTTATGTGCACCTGGGGCTTGAGAGTTTCCTAGTATCTGATGACTACTGGGGCCCAGGTGTACGTTGGGCCCATCCACGTGGGACATCAGGATCCAGGTGTACACCCAGGCTCCATGTGGACACCAGGCCAGGAGAACTCCAGCCCTTATCTGAATATCAGGTCCTAGGTGGATGCCCAGGCCCCATATGTACATCAAGCCCCAGGTATACACTGGACTCCAGGTGAACACCAGCAC i cerAty1.NW_012003779v1 I 13274 C 0 s chlSab2.chrUn_KE147573v1 21801 429 + 85383 CCTGGGGCCTGGTGTTCACCTGGGGCCTGATATCCACCTGGTACCTGTGTGTCAATCTAGTGCCTGGTGTCCACTTGAGGACTAGGTAGACACCTGAGGCTTGGTGTTCACCTGGGGCCTGGTGTTCCTCTTGTACTCAGTGTCCACCTGGACCCTGCATATCACCCTATGGCCTAGGTGGCCACTTGGAGCTTTATGTGCACCTGGGGCTTGAGAGTTTCCTAGTATCTGATGACTACTGGGGCCCAGGTGTACGTTGGGCCCATCCACATGGGACATCAGGATCCAGGTGTACACCCAGGCTCCATGTGGACACCAGGACAGGAGAACTCCAGCCCTTATCTGAACATCGGGTCCTAGGTGGATGCCCAGGCCCCATGTGTACATCAAGCCCCAGGTATACACTGGACTCCAGGTGAACACCAGCAC i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 551905 429 - 854822 CCTGGGGCCTGGTGCTCACCTGGGGCCTGATACCCACCTGGTACCTGTGTGTCAATCTAGTGCCTGGTGTCCACTTGAGGACTAGGTAGACACCTGAGGCTTGGTGTTCACCTGGGGCCTGGTGTTCATCTTGTACTCACTGTCCACCTGGACCCTGCATATCATCCTATGGCCTAGGTGGCCACTTGGAGCTTTATGTGCACCTGGGGCTTGAGAGTTTCCTAGTATCTGATGACTACTGGGGCCCAGGTATACATTGGGCCTATCCATGTTGGATTTCAGGATCCAGGTGTATACCCAGGCTCCATGTGGACACCAGGCCAGGAGAACTCCAGCCCTTATCTGAACATCAGGTCCTAGGTGGATGCCCAGGCCCCATGTGTACATCAAGCCCCAGGTATACACTGGACTCCAGGTGAACACCAGCAC i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e ponAbe2.chrUn 60074448 0 - 72422247 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=3587828.000000 s hg38.chr9_KI270719v1_random 101672 1003 + 176845 TCAATTGGATACACACACTTAAGGTGGATACCAGGCCCCACGTGAATTCCTATACTCCAGGTGAACATCAGGTCCCAAGTGGATACCTGGACCCCAGATGAATACCAGTCTCTAAATTAATACCAGGCCTCAGATGGTCCTTAGGAACCATGTGGGCATTAGTCATCAGGAAGTTACCTAGGCCCAAAGTGGACATCAGGCCCCATGTTGACACAAGATCTAGTTGGAAGTCAGGCACCAGGTGGACACCCAGGCCCTAGGTAAATACTTAGGTCCCAAGTTGACAGCAGG--------CCCTATGTGAACACTCAGAACTCAGGTGGACATCAGGCCTCAGGTGGACATCTGAGTTCATCTGGAACCTCATGTTACAGGCCCCATGTAAACACCAGGCCTTAGATGGATACCCAATCTCTAGGTAGACATCAGAGCTCAGATTGACACAAAGACTCCACTAGACATAATGTACCAATGAATATCCAGGCGCCCGGTAAATACCCAGGCCCCAGATTGACACCATGGTCTATGTGGACACACAGGCCCCGGGTAGTAAACAGGCCCAAGGTGGACACTGGACTGGACATCAGGTCCTAGGTTGACAACCGTGCTCCAAGTTGACACCAGGCCCCAAGTGAACATCTGGTCCCAGCTGGACACTAGTCCCCTGGTGAATACCTGGGCTCAAGGTTGACATCAGACCCTATGTGAACACTAGACCCCAGATAAACACTT---------ATGCCCTAAGTGGACATCAGGCCTCAGGTGGTTACCCAGTCCCAAGGTGAACATCAGGACCCCGATGGGCACCAGTTATCAAGTGGATTCCTAGGCCCCAGGTGAATATCAAGCCCTAGGTGGATACCGAGCCCCAGGTGGATACCTGGATCCTGGTAGACATCAGGTCCCAAGAGGACACTAGAACCCAGGAGTACATTAGGCCACAGGTTAACACGAAGGCCCCAGATGAATACCAGGCCAACTTGTGGACATCAGGCCTGAGAAGGGTCCT s panTro5.chr20 31460995 1010 + 66533130 TCAATTGGATACACACAATCAAG-TGGACACCAGGCCCCACGTGAATTCCTACACTCCAGGTGAACATCAGGTCCCAAGTGGATACCTGGACCCCAGGTGGATACCAGTCTCTAAATTAATACCAGGCCTCAGATGGTCCTTAGGAGCCATGTTGGCATTAGTTATCAGGAAGTTACCTAGGCCCAAAGTGGACATCAGGCCCCCTGTTGACACAAGATATATTTGGAAGTCAGGCCCCAGGTGGACACCCAGGCCCTAGGTAAATACTTAAGTCCCAGGTTGAGAGCAGGACATCAGGCCCTATGTGAACACTCAGAACTCAGGTGGACATCAGGCCTCAGGTGGACATCTGAGTTCATCTGGAACCTCGTGTTATAGGCCCCATGTAAACACCAGGCCTTAGGTGGATACCCAATCTCTAGGTGGACATCAGAGCTCAGATTGACACAAAGACTCCAGTAGACATAATGTACCAATGAATATCCAGGCCCCCGGTAAATACCCAGGCCCCAGATTGACATCAGGGTCTATGTGGACCCACAGGCTCCGGGTAGTAAACAGGCCCAAGGTGGACGCTGGACTGGACATCAGGTCCTAGGTTGACAACCATGCTTCAAGTTGACACCAGGCACCAAGTGAACATCTGGTCCCAGCTGGACACTAGTCTCCTGGTGAATACCTGGGCTCAAGGTTGACAGCAGGCCCCATGTGAACACTAGACCCCAGCTAAACACTT---------ATGCCCTAAGTGGACATCAGGCCTCAGGTGGTTACCCAGTCCCAAGGTGAACATCAGGACCCCGATGGGCACCAGTTATCAAGTGGATTCCCAGACCCCAGGTGAATATCAAGTCCTAGGTGGATACCAGGCCCCAGGTGGATACCAGGATCCTGGTAGACATCAGGTCCTAAGAGGACACTAGAACCCAGGAGTACATTAGGCCACAGGTTATCACAAAGGCCCCAGATGAATAGCAGGCCAACTTGTGGACATCAGGCCTGAGAAGGGTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132570485 980 + 247869975 TCAATTGGATATACACACTCAAGGTGGACACCAGGCCCCACGTGAATTCCTACACTCCAGGTGAACATCAGGTCCCAAATGGATACCTGGACCCCAGGTGGATACCAGTCTCTAAATTAATACCAGGCCTCAGATGGTCCTTAGGAGCCATGTGGGCATTAGTCATCAGGAAGTTACCTAGGCCCAAAGTGGACATCAGGCCCCATGTTGACACAAGATCTAGTTGGAAGTCAGGCCCCAGGTGGACACCCAGGCCCTAGGTAAATACTTAGGTCCCAAGTTGACAGCAGG--------CCCTATGTGAACACT---------------------GCATCAGGTGGACATCCGAGTTCATCTAGAACCTCGTATTACAGGCCCCATGTAAACACCAGGCCTTAGGTGGATACCCAATCTCTAGGTGGACATCAGAGCTCAGATTGACACAAAGACCCCAGTAGACATAATATACCAATGAATATCCAGGCCCCTGGTTAATACCCAGGCCCCAGATTGACACCAGGGTCTATGTGGACACACAGGCCCCAGTTAGAAAACAGGCCCAAGGTGGACACTGGACTGGACATCAGGTCCTAGGTTGACAACCATGCTTCAAGTTGACACCAGACCCCAAGTAAACATCTGGCCCCAGCTGGACACTAGTCCCCTTGTGAATATCTAGGCTCAAGGTTGACATCAGGCCCCATGTGAACACTAGACCCCAGATAAACACTT---------ATGCCCTAAGTAGACATCAGGCCTCAGGTGGTTACCCAGTCCCAAGGTGAACATCAGGACCCCGATGGGCACCAGTTATGAAGTGGATTCTTAGGCCCCAGCTGAATATCAAGCCTTAGGTGGATACCAGGCCCCAGGTGGATACCAGGATCCTGGTAGACATCAGGTCCCGAGAGGACACTAGAACCCAGGAGTACATTAGGCCACA--TTAACACGAAGGCCCCAGACAAATACCAGGCCAACTTGTGGACATCAGGCCTGAGAAGGGTCCT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 77038 1003 + 95358 TCAATTGGATACACACACTTAAGGTGGATACCAGGCCCCACGTGAATTCCTACACTCCAGGTGAACATCAGGTCCCAAGTGGATACCTGGACCCCAGGTGGATACCAGTCTCTAAATTAATACCAGGCCTCAGATGGTCCTTAGGAGCCATGTGGGCATTAGTCATCAGGAAGTTACCTAGGCCCAAAGTGGACATCAGGCCCCGTGTTGACACAAGATCTAGTTGGAAGTCAGGCACCAGGTGGACACCCAGGCCCTAGGTAAATACTTAGGTCCCAAGTTGACAGCAGG--------CCCTATGTGAACACTCAGAACTCAGGTGGACATCAGGCCTCAGGTGGACATCTGAGTTCATCTGGAACCTCATGTTACAGGCCCCATGTAAACACCAGGCCTTAGATGGATACCCAATCTCTAGGTGGACATCAGAGCTCAGATTGACACAAAGACTCCAGTAGACATAATGTACCAATGAATATCCAGGCCCCCGGTAAATACCCAGGCCCCAGATTGACACCACGGTCTATGTGGACACACAGGCCCCGGGTAGTAAACAGGCCCAAGGTGGACACTGGACTGGACATCAGGTCCTAGGTTGACAACCACGCTTCAAGTTGACACCAGGCCCCAAGTGAACATCTGGCCCCAGCTGGACACTAGTCCCCTGGTGAATACCTAGTCTCAAGGTTGACATCAGACCCTATGTGAACACTAGACCCCAGATAAACACTT---------ATGCCCTAAGTGGACATCAGGCCTCAGGTGGTTACCCAGTCCCAAGGTGAACATCAGGACCCCGGTGGGCACCAGTTATCAAGTGGATTCCTAGGCCCCAGGTGAATATCAAGCCCTAGGTGGATACCGAGCCCCAGGTGGATACCTGGATCCTGGTAGACATCAGGTCCCAAGAGGACACTAGAACCCAGGAGTACATTAGGCCACAGGTTAACACGAAGGCCCCAGATGAATACCAGGCCAACTTGTGGACATCAGGCCTGAGAAGGGTCCT i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116157163 985 - 135191526 TCAATTGGATACACATACTCAAGGTGGACACCAAGCTCCACGTGAATTCCTACACTCCAGGTGAACATCAGGTCCCAAGTGGATACCTGGACCCCAGGTGGATACCAGTCTCTAAATTAATACCAGGCCTCAGATGGTCCTTAGGAGCCATGTGGACGTTAGTCATCAGGAAGTTACCTAGGCCCAAAGTGGACATCAGGCTCCATGTTGACACAAGATCTAGTTGGAAGTCAGGCCCCAGGTGGACACCCAGGCCCTAGGTAAATACTTAGGTCCCAAGTTGACAGCAGG--------CCCTATGTAAACACTCAGAAC------------------TCAGGTGGACATCTGAGTTCATCTGGAACCTTGTGTTACAGGCCCAATGTAAACACCAGGCCTTAGGTAGATACCAAATTTCTAGGTGGACATCAGAACTCAGATTGACACAAAGACTCCAGTAGACATAATGTACCAATGAATATCCAGGACCCTGGTAAATACCCAGGCCCCAGATTGATACCAGAGTCTATGTGGACAGACAGGCCCTGGGTAGAAAACAGGCCCAAGGTGGACACTGGACTGGACATCAGGTCCTAGGTTGACAACCATGCTTTAAGTTGACACCAGGCCCCAAGTGAACATCTGGCCCCAGCTGGACAGTAGTCCCCTGGTGAATACCTAGTCTCAAGGTTGACATCAGGCCCCATGTGAACACTAGACCCCAGATAAACACTT---------ATGCCCTAAGTGGACATCAGGCCTCAGGTGGTTACCCAGTCCCAAGGTTAACATCAGGACCCCGATGGGCACCAGTTATGAAGTGGATTCCTAGGCCCCAGGTGAATATCAAGCCCTAGGTGGATACCAGGCCCCAGGTGGATACCAGGATCCTGGTAGACATCAGGTCCCAAGAGGACACTAGAACCTAGGAGTACATTAGGCCACAGGTTAACATGAAGGCCCCAGATGAATACCAGGCCAACTTGTGGACATCAGGCCTGAGAAGGGTCCT i ponAbe2.chr9 M 11851 C 0 s nomLeu3.chrUn_GL397501_2 272417 1003 + 1485088 TCAGTTCGATACACACACTCAAGGTGGACACCAGGCCCCACGTGAATTCCTACACTCCAGGTGAACATCAGGTCCCAAGTGGATACCTGGACCCCAGGTGGATACTAGTCTCTAAATTAATACCAGGCCTCAGATGGTCCTTAGGAGCCATGTGGGCATTAGTCATCAGGAAGTTACCTAGGCCCAAAGTGGACATCAGGCCCCATGTTGACACAAGATCTAGTTGGAAGTCAGGCGCCAGGTGGACACCCAGGCCCTAGGTAAATAATTAGGTCCCAAGTTGACAGCAGG--------CCCTATGTGAACACTCAGAACTCAGGTGGACATCAGGCCTCAGGTGGACATCTGAGTTCATCTGGAACCTCGTGTTACAAGCCCCATGTAAACACCAGGCCTTAGGCGGATACCCAAACTCTAGGTGGACATCAGAGCTCAGATTGACACAAAGACCCCAGTAGACATAATGTACCAATGAATATCCAGGCCCCTGGTAAATGCTCAGGCCCCAAATTGACACCAGGGTCTATGTGGACACACAGGCCCTGGGTAGAAAACAGGCCCAAGGTGGACACTGGACTGGACATCAGGTCCTAGGTTGACAACCATGCTTCAAGTTGACACCAGGACCCAAGTGAACATCTGGCCCCAGCTGGACACTAGTCCCCTGGTGAATACCTAGGCTCAAGGTTGACATTAGGCCCCTTGTGAACACTAGACCCCAGATAAACACTT---------ATGCCCTAAGTGGACATCAAGCCTCAGGTGGTTACCCAGTCCGAAGGTGAAAGTCAGGAGCCTGATGGGCACCAGTTTTCAAGTGGATTCCTAGGCTCCAGGTGAATATGAAGCCCTAGGTGGATACCAGGCCCCAGATGGATACCAGGATCCTGGTAGACATCAGATCCCAAGAAGACACTAGAATCCAGGAGTACATTAGGCCACAGGTTAACACAAAGGCCCCAGATGAATACCAGGCCAACTTGTGGACATCAGGCCTGAGAAGGGTCCT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 18786 974 + 30162 TCAGTTGGATACACACACTCAAGGTGGAAACCAGGCCCCAGGTGAACTGCTACACTCCAGGTGAACATCACGTCTCAGGTGGACACCTGGACCCCACGTGGGTACTAGGCTCTAAATTAATACCAGGCCTCAGGTGGTCCTCAGGAACCATGTGGACCTTAGTCATCAGGAGGTAACCTAGGCCCAAAGTGTATATCAGGTTCCATGTTGACACAAGAACTACTCGGAAGTCAGGCCCCGGGTAGACACCCAGGCCCTAG------------GTCCCAAGTTGACACCAGG--------CCTTATGTGAATACTTATAACTCAGGTCATCATCACACCTCAGGTGGACATCTGAGTTCATCTGGAACCTGGTGTTAGAGGCCCCATGTAAACGCCAAGCCATAGGTGGATACCCAATCCCTAGGTGGACATCAGAGCTCAGATTGACACAAAGACCCCAGTAGACATGATGTACCCCTGAATATCCAGGCCCCAGCTAAATACCCAGGCCCCAAATTGACACCAGGGTCTATGAGGACACACAGGACTCAGATAGAAAACAGGCCCAAGGTGGACACTGGACTGTAAATCAGGTCCTAGGTTGACAACCATGCTTCAAGTTGACACCAGGCCCCAAGTGAACATCTGGCCCCAGCTGGACACTAGTCCCCTGGTGAATACCTAGGCTCAAGGTTGACATCAGGCCCCACATGAACACTAGACCCCAAATACACACTTG--------ATGCCCTAAGTGGACATCAAGCCTCAGGTGTTTACCCAGTCCCAAGGTGAATATCAGGACACAGATGGGCACCAGTTATCAAGTGGATTCCTAGTCTCCAGGTGCATATCAGGCCCT------------------AGGTGGATACCAGGATCCTGGTAGACATCAGGCCCCAAGAGGACACTAGAACCCAGGAGTACATTAGGCCACAGGTCAACACCAAGGCACCAGATGAATACCAGGCCAACTTGTGGACATTAGGCCCGAGAAGGGTCCT i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 42959 964 - 323133 TCAGTTGGATACACACACTCAAGGTGGACACCAGGCCCCAGGTGAATTCCTACATACCAGGTGTACATCAGGTCTCAGGTGGACACCTGGACCCCAGGTGGATACTAGGCTCTAAATCAATACCAGGTCTCAGGTTGTCCTCAGGAACCATGTGGACATTAGTCATCAGGAGGTTACCTAGGCCCAAAGTGGACATCAGGCCCCATGTCGACACAAGAACTAGTTGGAAGTCAGGCCCCAGGTAGATACCCAGGCCCTAG---------------------------------------------GTAAATACTTAGGTCCCAAGATGACAGCAGGCCTCAGATGTACATCTGAGTTCATCTGGAATCTGGTGTTACAGGCCCCATGTAAACACCAGGCCTTAGGTAGATATCCAACCCCTAGGTGGGTATCAGAGCTCAGATTGACATGATG-TACCGGTAGACATGATGTACCAATGAATATCCAGGCCCCAGGTAAATACCTAGGCCCCAAAATGACACCAGGGTCTATGTGGACACACAGGCCCCAGGTAGGAAACAGGCCCAAGGTGGACACTGGACTGGATATCAGGTCCTAGGTTGACAACCTTGCTTCAAGTTGACACCAGGCCCCAAGTGAA----------CAGCTGAACACTAGTCCCCTGGTGAGTACCTAGGCTCAAGGTTGACATCAGGACCCGCGTGAACACAAGACCCCAGATAGACACTTATGCCCTTTATGCCCTAAGTGGACATCCAGCTTCAGGTGGTTCCCCAGTCCCAAGGTTAACATCAGGACCCAGATGGGCACCAGTTATCAAGTGGATTCCTAGTCCTCAGGTGAATATCAGGCCCTAGGTGGATACCTGGCCCCAGGTGGATACCAGGATCCTGGTAGACCTCAGGTCCCAAGAAGACACTAGAACCCAGGAGTACATTAGGCCACAGATTAACACCAAGGCACTGGATGAATACCAGGCCAACTTGTGGACATCAGGCCTGAGAAGTGTCCT i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 22230 1002 + 85383 TCAGTTGGATACACACACTCAAGGTGGACACTAGGCCCCAGGTGGATTCCTACATACCAGGTGTACATCAGGTCTCAGGTGGACACCTGGACCCCAGGTGGATACCAGGCTCTAAATCAATACCAGGTCTCAGGTTGTCCTCAGGAACCATGTGGACATTAGTCATCAGGAGGTTACCTAGGCCCAAAGTGGACGTCAGGCCCCATGTCGACACAAGAACTAGTTGGAAGTCAGGCCCCAGGTAGATACCCAGGCCCTAGGTAAATACTTAGGTCCCAAGATAACAGCAGG--------CCCTGTGTGAACTCTCAGAACTCAGGTGGACATCAGGCCTCAGGTGTACATCTGAGTTCATCTGGAATCTGGTGTTACAGGCCCCATGTAAACACCAGGCCCTAGGTAGATACCCAATCCCTAGGTGGATATCAAAGCTCAGATTGACACAAAAACCCCAGTAGACATGATGTACCAATGAATATCCAGGCCCCAGGTAAATACCTAGGCCCCAAAATGACACCAGGGTCTATGTGGACACACAGGCCCCAGGTAGGAAACAGGCCCAAGGTGGACACTGGACTGGACATCAGGTCCTAGGTTGACAACCTTGCTTCAAGTTGACACCAGGCCGCAAGTGAA----------CAGCTGGACACTAGTCCCCTGGTGAATACCTAGGCTCAAGGTTGACATCAGGCCCCGTGTGAACACAAGACCCCAGATAGACACTTATGCCCCTTATGCCCTAAGTGGACATCCAGCTTCAGGTGGTTCCCCAGTTCCAAGGTTAACATCAGGACCCAGATGGGCATCAGTTATCAAGTGGATTCCTAGTCCTCAGGTGAATATCAGGCCCTAGGTGGATACCTGGCCCCAGGTGGATACCAGGATCCTGGTAGACCTCAGGTCCCAAGAAGACACTAGAACCCAGGAGTACATTAGGCCACAGATTAACACCAAGGCACCAGATGAATACCAGGCCAACTTGTGGACATCAGGCCTGAGAAGTGTCCT i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 552334 993 - 854822 TCAGTTGGATACACACACTCAAGGTGGACACCAGGCCCCAGGTGAATTCCTACACTCCAGGTGAACATCAGGTCTCAGGTGGACACCTGGACCTGAGGTGGATACTAGGCTCTAACTCAATACCAGGTCTCAGGTTGTCCTCAGGAACCATGTGGACATTAGTCATCAGGAGGTTACCTAGGCCCAAAGTGGACATCAGGCCCCATGTTGACACAAGAACTATTTGGAAGTCAGGCCCCAGGTAGATACCCAGGCCCTAGGTAAATACTTAGGTCCCAAGATGACAGCAGG--------CCCTACGTGAACACACAGAACTCAGGTGGACATCAGGCCTCAGGTGTACATCTGAGTTCATCTGGAATCTGGTGTTACAGGCTCCATGTAAACACCAGGCCTTAGGTAGATACCCAATCCCTAGGTGGATATCGGAGCTCAGATTGACACAAAGACCCCAGTAGACATGATGTACCAATGAATATCCAGGCCCCAGGTAAATACCTAGGCCCCAAAATGACACCAGGGTCTATGTGGACACACAGGCCCCAGGTAGGAAACAGGCCCAAGGTGGACACTGGACTGGACATCAGGTCCTAGGTTGACAACCTTGCTTCAAGTTGACACCAGGCCCCAAGTGAA----------CAGCTGGACACTAGTCCCTTGGTGAATACCTAGGCTCAAGGTTGACATCAGGCCCCGTGTGAACACAAGACCCCAGATAGACACTT---------ACGCCCTAAGTGGACATCAAGTTTCAGGTGGCTCCCCAGTCCCAAGGTTAACATCAGGACCCAGAGGGGCACCAGTTATCAAGTGGATTCCTAGTCCTCAAGTGAATATCAGGCCCTAGGTGGATACCTGGCCCCAGGTGGATACCAGGATCCTGGTAGACATCAGGTCCCAAGAAGACACTAGAACCCAGGAGTACATTAGGCTACAGATTAACACCAAGGCAACAGATGAATACCAGGCCAACTTGTGGTCATCAGGCCTGAGAAGTGTCCT i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=-6081.000000 s hg38.chr9_KI270719v1_random 102675 2 + 176845 T------------------G s panTro5.chr20 31462005 2 + 66533130 T------------------G i panTro5.chr20 C 0 C 0 s panPan2.chr2B 132571465 2 + 247869975 C------------------A i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 78041 20 + 95358 GTGGACATCAGGCCTGAGAA i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116158148 2 - 135191526 T------------------G i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 273420 2 + 1485088 T------------------G i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 19760 2 + 30162 T------------------A i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 43923 2 - 323133 T------------------G i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 23232 2 + 85383 T------------------G i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 553327 2 - 854822 T------------------G i colAng1.NW_012118199v1 C 0 C 0 s rhiBie1.NW_016833180v1 145 2 + 4707 C------------------G i rhiBie1.NW_016833180v1 N 0 I 655 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=325360.000000 s hg38.chr9_KI270719v1_random 102677 87 + 176845 GGCTCCAGGGGGATATCAGGCCCCAGGTGAACATCCAGCACTCAGATGAACATTAAGCTTCAGGTAGGCATCATGCCTCAGGTGAAC s panTro5.chr20 31462007 87 + 66533130 GGCTCCAGGTGGATATCAGGCCCCAGGTGAATATCCAGCACTCAGATGAACATGAGGCTTCAGGTAGACATCATGCCTCAGGTGAAC i panTro5.chr20 C 0 I 64055 s panPan2.chr2B 132571467 87 + 247869975 GGCTCCAGGTGGATATCAGGCGCCAGGTGAACATCCAGCACTCAGATGAACATTAAGCTTCAGGTAGACATCATGCCTCAGGTGAAC i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 78061 87 + 95358 GGGTCCAGGTGGATATCAGGCCCCAGGTGAATATCCAGCACTCAGATGAACATTAAGCTTCAGGTAGGCATCATGCCTCAGGTGAAC i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116158150 87 - 135191526 GGCTCCAGTTGGATATCAGGCCCCAGGTGAACATCCAGCACTCAGATGAACATTAAGCTTCAGGTAGACATCATGCCTCCGGTGAAC i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 273422 87 + 1485088 GGCTCCAGGTGGACATCAGGCCTCAGGTGAACATCCAGCACTCAGATGAACATTAAGCTTCAGGTACACATCATGCCTCAGGTGAAC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 19762 87 + 30162 GGCCTCAGGTGGATATCAGGCCCCAGGTGAACATCCAGCACCCAGATGAACATCAAGCTTCAGGTAGACATCATGCCTCAGTTGAAC i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 43925 87 - 323133 GGTCCCAGATGGATGTCAGGCCCCAGGTGAACATCCAGCCCCCAGATGAACATCAAGCTTCAGGTAGAAATCATGCCCCAGGTGAAC i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 23234 87 + 85383 CGTCCCAGATGGATATCAGGCCCCAGGTGAACATCCAGCACCCAGATGAACATCAAGCTTCAGGTAGACCTCATGCCCCAGGTGAAC i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 553329 87 - 854822 GGCCCCAGGTGGATATCAGGCCCCAGGTGAACATCCAGCACCCAGATGAACATCAAGCTTCGGGTAGACCTCATGCCTCAGGTGAAC i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiBie1.NW_016833180v1 147 655 + 4707 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=118698.000000 s hg38.chr9_KI270719v1_random 102764 29 + 176845 TCCAGGCCCCAGCTGAACATCAGGTCCCA s panTro5.chr9 41278168 29 + 116767853 TCCAGGCCCCAGCTGAACATCAGGCCCCA i panTro5.chr9 n 64055 C 0 s panPan2.chr2B 132571554 29 + 247869975 TCCAGGCCCCAGCTGAACATCAGGCCCCA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 78148 29 + 95358 TCCAGGCCCCAGCTGAACATCAGGCCCCA i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116158237 29 - 135191526 TCCAGGCCCCAGCTGAGCATCAGGCCCCA i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 273509 29 + 1485088 TCCAGGCCCCAGCTGAACATCAGGCCCCA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 19849 29 + 30162 TCCAGGCTCCAGCTGAACATCAGGCTCCA i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 44012 29 - 323133 TCCAGGCTCCAGCTGAACATCAGGCCCCA i cerAty1.NW_012003779v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 23321 29 + 85383 TCCAGGCTCCAGCTGAACATCAGGCCCCA i chlSab2.chrUn_KE147573v1 C 0 I 119 s colAng1.NW_012118199v1 553416 29 - 854822 TCCAGGCTCCAGCTGAACATCGGGCCCCA i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiBie1.NW_016833180v1 147 655 + 4707 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=407752.000000 s hg38.chr9_KI270719v1_random 102793 132 + 176845 CGTGGATGCCCAGAATCCTGGTGCACATCTGGTCACAGTTGGACATTCAACCCCAGGTGACCATCAGGCCATGGGTGAATACACGGTTTCCAGGTAGACATCAGATCAAAGGGGAACATCAGTCCCCCAGTG s panTro5.chr9 41278197 132 + 116767853 GGTGGATGCCCAGAATCCGGGTGCACATCTGGCCACAGTTGGACATTCAACCCCAGGTGACCATCAGGCCATGGGTGAATACACGGTTTCCAGGTAGACATCAGATCAAAGGGGAACATCAGTCCCCCAGTG i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132571583 132 + 247869975 GGTGGATGCCCAGGATCCGGGTGCACATCTGGCCACAGTTGGACATTCAACCCCAGGTGACCATCAGGCCGTGGGTGAATACACGGTTTCCAGGTGGACATCAGATCAAAGGTGAACATCAGTCCCCCAGTG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 78177 132 + 95358 GGTGGATGCCCAGAATCCGGGTGCATATCTGGCCACAGTTGGACATTCAACCCCAGGTGACCATCAGGCCATGGGTGAATACACGGTTTCCAGGTAGACATCAGATCAAAGGGGAACATCAGTCCCCCAGTG i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116158266 132 - 135191526 GGTGGATGCCCAGGTTCCGGGTGCACATCTGGCCACAGTTGGACATTCAACCCCAGGTGACCATCAGGCCATGGGTGAATACACCGTTTCCAGGTAGACATCAGATCGAAGGTGAACATCAGTCCCCCAGTG i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 273538 132 + 1485088 GGTGGATGCCCAGGTTCCAGGTGCACATCTGGCCACAGTTGGACATTCAACCCCAGGTGACCATCAGGCCATGGGTGAATACACGGTTTCCAGGTGGACATCAGATCAAAGGTGAACATCAGTCCCCCAGTG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 19878 132 + 30162 GGTGGATGCCCAGCTTCCAGGTGCACATCTGGCCACAGTTGGACATTCAACCCCAAGTGACCCTCAGGCCATGGGTGAATACACAGTTTCCAGGTGAACATGAGATCAAAGGTGAACATCAGTCCCCCAGTG i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 44041 132 - 323133 GGTGGATGCCCAGGTTCCAGGTGTACATCTGACCACAGTTGGACATTCAACCCCAGGTGACCATCAGGCTATGAGTGAATACATGGTTTCCAGGTGGATATCAGGTCAAAGGTGAACATCACTTCCCCAGTG i cerAty1.NW_012003779v1 C 0 C 0 s colAng1.NW_012118199v1 553445 132 - 854822 GGTGGATGCCCAGGTTCCAGGTGCACATCTGACCACAGCTGGACATTCAACCCCAGGTGACCATCAGGCCATGAGTGAATACACGGTTTCCAGGTGGATATCAGGTCAAAGGTGAATATCAGTCCCTCAGTG i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiBie1.NW_016833180v1 147 655 + 4707 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I a score=207563.000000 s hg38.chr9_KI270719v1_random 102925 71 + 176845 GACATCAGGCCCAAGGTGGACACTCAACTAGAGGTTTACATCAGGCCACATGTTGACACCTAGTCCCAGGT s panTro5.chr9 41278329 71 + 116767853 GACATCAGGCCCAAGGTGGACACTCAACTAGAGGTTTACATCAGGCCACATGTTGACACCTAATCCCAGGT i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132571715 71 + 247869975 GGCACCAGGCCCAAGGTGGACACTGAACTAGAGGTTTACATCAGGCCACATGATGACACCTAGTCCCAGGT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 78309 71 + 95358 GACATCAGGCCCAAGGTGGACACTCAACTAGAGGTTTACATCAGGCCACATGTTGACACCTAGTCCCAGGT i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116158398 71 - 135191526 GACATCAGGCCCAAGGTGGACACTGAACTAGAGGTTTACATCAGGCCACATGTTGACACCTAGTCCCAGAT i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 273670 71 + 1485088 GACGTCAGGCCCAAGGTGGACACTGAACTAGAGGTTTACATCAGGCCACATGTTGACACCTAGTCCCAGGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 17375 71 - 30162 GCCATAAGGTCCCAGGTGGACCCTGAACTTGAGGTCTACATCAGTCCGCAAGTTAACATCCAGGACCAGGT i macFas5.chr9_KE145707_random I 4137 n 0 s cerAty1.NW_012003779v1 44173 71 - 323133 GACATCAGGCCCAAGGTGGACACTGAACTAGAGGTTTACATCAGGCCACATATTGACACCTAGTCCCAGAT i cerAty1.NW_012003779v1 C 0 C 0 s colAng1.NW_012118199v1 553577 71 - 854822 GACATTAGGCCCAAGGTGGACACTGAACTAGAGGTTTATATCAGGCCACATATTGACACCTAGTCCCAGAT i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiBie1.NW_016833180v1 147 655 + 4707 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I a score=2800.000000 s hg38.chr9_KI270719v1_random 102996 1 + 176845 G s panTro5.chr9 41278400 1 + 116767853 G i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132571786 1 + 247869975 G i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 78380 1 + 95358 G i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116158469 1 - 135191526 G i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 273741 1 + 1485088 G i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012003779v1 44244 1 - 323133 G i cerAty1.NW_012003779v1 C 0 C 0 s colAng1.NW_012118199v1 553648 1 - 854822 G i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiBie1.NW_016833180v1 147 655 + 4707 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e macFas5.chr9_KE145707_random 17446 0 - 30162 I a score=1026300.000000 s hg38.chr9_KI270719v1_random 102997 337 + 176845 GACATCAGGCCCCAGGTGGATACCTAGGCTTCCAGTGAATTTCAGACACCAGGTTGACATTCAGGCCCCCAGTGGTCATCTGGCCTCATGCGAACACTCAGACCCCAGGTGCAAATGATGTCTCAACTGGATACCAAACCCCTAGTTTGATACCCAAGGCCCAGGTGGACACCAGGTCCAAGGCTGACACTCAAGCCCTAAGTGAATACCAAACTCTAGGTGAATAATTCAACCCAGGTGGTCATTAGGACCCAGCTGGATACCAGTCCCCAGGTTAACAGAAGGCCCCCGCTGGGCACCTAGGCACCAGCTGGACATCAGGCCCTATGTAAACACC s panTro5.chr9 41278401 337 + 116767853 GACATCAGGCCCCAGCTAGATACCTAGGCTTCCAGTGAATTTCAGACACCAGGTTGACATTCAGGCCCCCAGTGGTCATCTGGCCTCATGCGAACACTCAGACCCCAGGTGCAAATGATGTCTCAACTGGATACCAAACCCCTTGTTTGATAACCAAGGCCCAGGTGGACACCATGTCCAAGGCTGACACTCAAGCCCTAAGTGAATACCAAACTCTAGGTGAATAATTCAACCCAGGTGGTCATTAGGACCCAGCTGCATACCAGTCCCCAGGTTAACACAAGGCCCCCAGTGGGCACCTAGGCACAAGCTGGACATCAGGCCCTATGTAAATACC i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132571787 337 + 247869975 GACATCAGGCCCCAGGTGGATACCTAGGCTCCCAGTGAATTTCAGATACCAGGTTGACATTCAGGCCCCCAGTGGTCATCTGGCCTCATGCAAACACTCAGACCCCAGGTGCAATTGATGTCTCAACTGGACACCAAACCCTTAGTTTGATACCCAAGGCCCAGGTGGACACCAGGTCCAAGGCTGACACTCAAGCCCTAAGTGAATACCAAACCCTAGGTGAATAATTCAACCCAGGTGGTCATTAGGACCCAGCTGGATACCAGTCCCCAGGTTAACACAAGGCCCCCAGTGGGCACCTAGGCACCAGCTGGACATCAGGCCCTATGTAAACACC i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 78381 337 + 95358 GACATCAGGCCCCAGCTAGATACCTAGGCTTCCAGTGAATTTCAGACACCAGGTTGACATTCAGGCCCCCAGTGGTCATCTGGCCTCATGCGAACACTCAGACCCCAGGTGCAAATGATGTCTCAACTGGATACCAAACCCCTTGTTTGATAACCAAGGCCCAGGTGGACACCATGTCCAAGGCTGACACTCAAGCCCTAAGTGAATACCAAACTCTAGGTGAACAATTCAACCCAGGTGGTCATTAGGACCCAGCTGGATACCAGTCCCCAGGTTAACACAAGGCCCCCAGTGGGCACCTAGGCACCAGCTGGACATCAGTCCCTATGTAAATACC i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116158470 337 - 135191526 GACATCAGACCCCAGGTGGATACCTAGGCCTCCAGTGAATTTCAGACACCAGGTTGACATTCAGGCCCCCAGTGGTCATCTGGCCTCATGAGAACACTCAGACCCCAGGTGCAAATGATGTCTCAACTGGACACCAAACCGCTAGTTTGATACCCAAGGCCCAGGTGGACACCAGGTCCAAGGCTGACACTCAAGCCCTAAGTGAATACCAAGCTCTAGGTGAATAATTCAACCCAGGTGTTCATTAGGACCCAGCTGGATACCAGTCCCCAGGTTAACACAAGGCCCCCAGTGGGCACCTAGGCACCAGCTGGACATCAGGCCCTATGTAAACACC i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 273742 337 + 1485088 GACATCAGGCCCCAGGTGGATACCTAGGCTCCCAGTGAATTTCAGACACCAGATTGACGTTCAGGCCGCCAGTGGTCATCTGGCCTCATGCAAACACTCAGACCCCAGGTGCACAGGATGTCTCAACTGGACACCAAACCCCTAGTTTGATACCCAAGGCCCAGGTGGACACCAGGTCCAAGGCTGACACTCAAACCCTAAGTGAATACCAAACTCTAGGCGAACAATTCAACCGAGGTGGTCATTAGGACCCAGCTGGATACCAGTCCCCAGGTTAACACAAGGCCCCCAGTGGGCACCTAGGCAGCAGCTGGACATCAGGCCCTATGTAAACACC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 20010 336 + 30162 GACATCAGGCCCAAGGTGGATACCCAGGCTCCCAGTGAATTTCAGACACCAGGTTGATATTCAGACCCCCAGTGGTCATCTGGCCTCATGCGAACACTCAGACCTCAGGTGCACCTGATGTCTCAACTGGACACC-AACTCCTGGTTTGATACCCAAGTCCCAGGTGGACACCAGGTCCAAGGCTGGCACTCAAGCCCTAAGTGAACACCACACTCTAGGTGAATAATTCAACCCAGGTGGTCATTAGGACCTAGCTGGATACCAGGCCCCAGGTTAACACAAGGCCCCCGGTGGGTATCTAGGCACCAGCGGGACATCAGGCCCTAAGTAAACACC i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 44245 333 - 323133 AACATCAGGCCCCAGGTGGATATCCAGGCTCCCAGTGAATTTCAGACACCAGGTTGACATTCAGGCCCCCATTGGTCATTTGGCCTCATGCAA--ACTCAGACCCCAGGTGCACATGATGTCTCAACTGGACACC-AACCCCTAGTTTGATACCCAAGTCCCAGGTGGACACCAGGTCCAAGGCTGACACTCAAGCCCTAAGTGAACACCAAACTCTAGGTGAATAATTCAACCCATGTGGTCATTAGGACCCAGCTGGATACCAGTCCCCAGGTTAACACAAGGCCCCCGGTGGGCATTT-GGCACCAGCTGAACATCAGGCCCTATGTAAACACC i cerAty1.NW_012003779v1 C 0 C 0 s colAng1.NW_012118199v1 553649 334 - 854822 AACATCAGGTCCCAGGTGGATACCCAGGCTCCCAGTGAATTTCAGACACCAGGTTGACATTCAGGCCCCCATTGCTCATTTGGCCTCATGTGA--ACTCAGACCCCAGGTGCACATGATGTCTCAACTGGACACC-AACCCCTAGTTTGATACCCAAGTCCCAGGTGGACACCAGGTTCAAGGCTGACACTCAAGCCCTAAGTGAACACCAAACTCTAGGTGAATAATTCAACCCGTGTGGTCATTAGGATCCAGCTGGATACCAGTCCCCAGGTTAACACAAGGCCCCCGGTGGGTATCTAGGCACCAGCTGAACATCAGGCCCTATGTAAACACC i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiBie1.NW_016833180v1 147 655 + 4707 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I a score=2395.000000 s hg38.chr9_KI270719v1_random 103334 1 + 176845 C s panTro5.chr9 41278738 1 + 116767853 C i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132572124 1 + 247869975 C i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 78718 1 + 95358 C i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 116158807 1 - 135191526 C i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 274079 1 + 1485088 T i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 20346 1 + 30162 C i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 44578 1 - 323133 T i cerAty1.NW_012003779v1 C 0 C 0 s colAng1.NW_012118199v1 553983 1 - 854822 C i colAng1.NW_012118199v1 C 0 C 0 s rhiBie1.NW_016833180v1 802 1 + 4707 C i rhiBie1.NW_016833180v1 I 655 N 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I a score=1392729.000000 s hg38.chr9_KI270719v1_random 103335 466 + 176845 AGGTCTCAGGTGAACACCATGTCCCAGGTGGACATCAGGCCCTAGGTGGACAC-GGGGCCACAGGTGGACATCTAGCCCCTGGGCAACATCCAGCCCCAGGTGGACATAACCATTTCCATGGATAAACCATTCCCAGGTGGATAGCAGGCCTCAAGAGGATGGCAGTCACCAGGTAGACATCAGGCCTCAGATAGACACCAAGGTCCCAGATGTACAGCAGGCCCCAACCGAACCCCAGACTCATGTGGACATCAGGCCACAGGTAGACACCAAGCCTTAGGTAGATACCTAACTTCAGGTAGACATCAGACCCAAGGTGGACACCCAGTCCCCAGGTGGACAGTCAGGCCCCAGGCACACATCAGGCCTTAAGTGGTCACCCAGGCCCCAGGTTAATATCCAGTTCCCAGGTGATCACCAAGCCCCAGGTAGACACCAGGCCGTAGGTGAGCAACAGGATGCAGTA s panTro5.chr9 41278739 466 + 116767853 GGGTCTCAGGTGAACACCATGCCCCAAGTGGACATCAGGCCCTAGGTGAACAC-GGGGCCACAGGTGGACATCTAGCCCCTGGGCAACATCCAGCCCCAGGCGGACATAACCATTTCCATGGATAAACCATTCCCAGGTGGATATCAGGCCTCAAGAGGATGGCAGTCACCAGGTAGACATCAGGCCTCAGATAGACACCAAGGTCTCAGATGTACAGCAGGCCCCAACCGAACCCCAGACTCATGTGGACATCAGGCCACAGGTAGACACCAAGCCTTAGGTAGATACCTAACTTCAGGTAGTCATCAGACCCAAGGTGGAGACCCAGTCCCCAGGTGGACAGTCAGGCCCCAGGCACACATCAGGCCTTAAGTGGACACCCAGGCCCCAGGTTGATATCCAGTTCCCAGGTGATCACCAAGCCCCAGGTAGACACCAGGCCATAGGTGAGCAACAGGATGCAGTA i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132572125 466 + 247869975 -GGTCTCAGGTGAACACCATGCCACAGGTGGACATCAGGCCCTAGGTGGACATGGGGGCCACAGGTGGACATCTAGCCCCTGGGCGACATCCAGCCCCAGGTGGACATAAACGTTTCCATGGATAAACCATTCCCAGGTGGATATCAGGCCTCAAGAGGATGGCAGTCACCAGGTAGACATCAGGCCTTAGATAGACACCAAGGTCTCAGATGTACAGCAGGCCACAACCGAACCCCAGACTCATGTGGACATCAGGCCACAGGTAGACACCAAGCCTTAGGTAGATACCTAACTTCAGGTAGACATCAGACCCAAGGTGGACACCCAGTCCCCAGGTGGACAATCAGGCCCCAGGCACACATCAGGCCTTAAGTGGACACCCAGGTCCCAGGTTGATGTCCAGCTCCCAGGTGATCACCAAGCCCCAGGTAGACACCAGGCCATAGGTGAGCAACAGAATGCAGTA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 78719 466 + 95358 GGGCCTCAGGTGAACACCATGCCCCAGGTGGACATCAGGCCCTAGGTGAACAC-GGGGCCACAGGTGGACATCTAGCCCCTGGGCAACATCCAGCCCCAGGCGGACATAACCATTTCCATGGATAAACCATTCCCAGGTGGATATCAGGCCTCAAGAGGATGGCAGTCACCAGGTGGACATCAGGCCTCAGATAGACACCAAGGTCCCAGATGTACAGCAGGCCCCAACCGAACCCCAGACTCATGTGGACATCAGGCCACAGGTAGACACCAAGCCTTAGGTAGAAACCTAACTTCAGGTAGACATCAGACCCAAGGTGGAGACCCAGTCTCCAGGTGGACAGTCAGGCCCCAGGCACACATCAGGCCTTAAGTGGACACCCAGGCCCCAGATTGATATCCAGTTCCCAGGTGATCACCAAGCCCCAGGTAGACACCAGGCCGTAGGTGAGCAACAGGATGCAgta i gorGor5.CYUI01000801v1 C 0 I 277 s ponAbe2.chr9 116158808 465 - 135191526 AGGTCTCAGGTGAACACCATGCCCCAGGTGGACATCAGGCCCTAGGTGGACTC-GGGGTCACAGGTGGACATCTAGCCCCTGGGCAACATCCAGCCCCAGGTGGACATAACCGTTTCCATGGATAAACCATTCCCAGGTGGATATCAGTCCTCAAGAGGAAGGCAGTCACCAGGTAGACATCAGGCCTCAG-TAGACACCAAGGTCCCAGATGTACAGCAGGCCCCATCTGAACCCCAGACTCATGTGGACATCAGGCCACAGGTAGACACCAAGCCTTACGTAGATACCTAACTTCAGGTAGACATCAGACCCAAGGTGGACACCCCGTTCCCAGGTGGACAATCAGGCCCCAGGCACACATCAGGCCTTAAGTGGACACCCAGGCCCCAGGTTGATATCCAGCTCCCAGGTGATCACCAAGCCCCAGGTAGACACCAGGCCATAGGTGAGCAACAGGATGCAGTA i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 274080 466 + 1485088 GGGTCTCAGGTGAACACCATGCCACAGGTGGACATCAGGCCCTAGGTGGACAC-GGGGCCATAGGTGGACATCTAGCCCCTTGGCGACATCCAGCCCCAGGTGGACATAACCGTTTCCATGGATAAACCATTCCCAGGTGGATATCAGGCCTCAAGAGGTTGGCAGTCACCAGGTAGACATCAGGCCTCAGATAGACACCAAGGTCCCAGATGTACAGCAGGCCCCAACTGAACCCCAGACTCATGTGGACATCAGGCCACAGGTAGACACCAAGCCTTAGGTAGATACCTAACTTTGGGTAGACATCAGACCCAAGGTGGACACCCAGTCCCCAGGTGGAAAATCAGGCCCCAGGCACACATCAGGCCTTAAGTGGACACCCAGGCCTCAGGTTGATATCCACCTCCCAGGTGATCACCAAGCCCCAGGTAGACACCAGGCCATAGGTGAGCAGCAGGATGCAGTA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 20347 466 + 30162 CAGTCCCAGGTGAACACCATGCCCCAGGTGGGCATTAGGCCCTAGGTGAACAT-GGGGCCACAGGTGGACATCTAGCCCCTGGGCGACATCCAGCCCCAGGTGGACATAACCGTTTCCATGCATAAACCATTCCCAGGTGGACATCAGGCCTCAAGAGGATGACAGTCACCAGGTAGACATCAGGCCTCAGTTGGACACCAAGGTCCCAGATGTACAGCAGGCCCCAGCTGAAACCCAGACTCATGTGGACATCAGGCCACAGGTAGACACCATGCCTTAGGTAGATACCCAACTTCAGGTGGACATCAGACCCAAGGTGGACATCCAGTCCCCAGATGGACATTCAGGCCCTAGGCACACATCAGGCCTTAAGTGGACACCCAGGCCCCAGGTTGATATCCAGCTCCCAGGTGATCACCAGGCCCCAGGTGGGCACCAGACCTTAGGTGAACAACAGGATGCAGTA i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 44579 465 - 323133 GGGTCTCAGGTGAACACTGTGCCCCAGGTGGACATCAGGCTCTAGGTGGATAC-GGGGTCACAGGTGGACTTCTAGTCCCTGGGAGACATCCAGTCCCAGGTGGACATAGCTGTTTCCATGGATAGACCATTCCCAGGTGGACATCA-GCCTCAATAGGATGGCAGTCACCAGGTAGACATCAGGCCTCAAATGGACACCAAGCTCCCAAATGTACAGCAGGCCTCAGCTGAACCCCAGACTCATGTGGACATCAGACCACAGGTAGACACCATGTCTTAGGGAGATACCTAACTTCAAGTGGACATCAGACCCAAAGTGGACACCCAGTCCCCAGGTGGACAATCAGGGCCCAGGCACATATCAGGCCTTAAGTGGACACCCAGGCCCCAGGTTGATATCCAGCTCCCAGGTGATCACCAGGCCCCAGGAAGACACCAGGCCTTAGGTGAACAACAGGATGCAGTA i cerAty1.NW_012003779v1 C 0 C 0 s colAng1.NW_012118199v1 553984 430 - 854822 GGCTCTCAGGTGAACACTGCGCCCCAGGTGGACATCAGGCCCTAGGTGGACAC-GGG-----------------AGCCCCTGGGAGACATCCAGCCCCAGGTGGGCATAACCGTTTCCATGGATAGACCATTCCCAGGTGGACATCAGGCCTCAATAAGATGGCAGTCACCAGGTAGACATCAGGCCT-------------------CAGATGTACAGCAGGCCTCAGCTGAACCCCAGACTCATGTGGACATCAGGCCACAGGTTGACACCATGCCTTAGGGAGATACCTAACTTCAAGTGGACATCAGACCCAAAGTGGACACCCAGTCCCCAGGTGGACAATCAGGCCCCAGGCACATATCAGGCCTTAAGTGGACACCCAGGCTCCAGGTTGATATCCAGCTCCCAGGTGATCAGTAGGCCCCAGGAAGACATCAGGCCTTAGGTGAACAACAGGATGCAGTA i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I a score=1460547.000000 s hg38.chr9_KI270719v1_random 103801 635 + 176845 GGTCATCAGGCCACAGCTGGATACCAGTCCCTGGTGAACACAAGGCCCCAGTGGGACACAGATCTAAGGCAGACATTAGGCCCCAGGTG--------GATCTG-GGTGGAATTCACCCTGAGGGGGACATTCGGCCCCAGGTACGCATCAGGCCTCAGCTGAATAACCAGTCCCCAGGTGGACATTAACCCACAGGTCAACCACAGTCCCCAGGTTGATACCTGGTCCCCAGGTGGCTACTCAATCTGCAGGGTAACATTAGGCCCCTGTAGGATCCCAGGCCCCAAGTGGATTCCTAAGCCCCTGGTGAACATCAGGTGCAGGTGTCCAAGTAGGCCCTGGGTGGACATAACTGTGTACAGGTAAGGAGTTGACCTATGGGGAGGATGAGCAGTCAGAAGCCCACTGGGGTCCTGCGTAGGTCTTCTGGAAGGGGGAGGCTGAGGGGATGGAACCTTAAAGAAGCAACCTCACTTCTTTGGCAACAGACCCTAACAGAACTTAGAATTCTGGTAACCAggccaggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcaggaggatcatgaaaccaggagatcgagaccagcctgaacaacatggtaaaaccac-atgtctactaaaaata s panTro5.chr9 41279205 644 + 116767853 GGTCATCAGGCCACAGCTGGATACCAGTCCCCGGTGATCACAAGGCCCCAGTGGGACATAGATCTAAGGCAGACATCAGGCCCCAGGTGGACATACAGATCTGAGGTGGAATTCACCCTGAGGGGGACATTCGGCCCCAGGTACGCATCAGGCCTCAGCTGAATAACCAGTCCCCAGGTGGACATTAACCCACAGGTCAACCACAGTCCCCAGGTTGATATCTGGTCCCCAGGTGGCAACTCAATCTGCAGGGTAACATTAGGCCCCTGTAGGATCCCAGGCCCCAAGTGGATTCCTAGGCCCCTGGTGAACATCAGGTGCAGGTGTCCAAGTAGGCCCTGGGTAGACATAACTGTGTACAGGTAAGGAGTTGACCTGTGGGGAGGATGAGCGGTCAGCAGCCCACTGGGGTCCTCAGTAGGTCTTCTGGAAGGAGGAGGCTGAGGGGATGGAACCTTAAAGAAGCAACCTCACTTCCTTGGCAACAGACCCTAACAGAACTTAGAATTCTGGTAACCAggccaggcacggtggctcacacctgtaattccagcactttgggaggctgaggcaggaggatcatgaaaccaggagatcgagaccagcctgaacaacatggtaaaaccac-atgtctactaaaaata i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132572591 644 + 247869975 GGTCATCAGGCCACAGCTGGATACCAGTCCCTGGTGAACACAAGGTCCCAGTGGGACATAGACCTAAGGCAGACATCAGGCCCCAGGTGGACATACAGGCCTGAGGTGGAATTCACCCTGAGGGGGACATTGGGCCCCAGGTGCACATCAGGCCTCAGGTGAGTAACCAGTCCCCAGGTGGACATTAGCCCGCAGGTCAACCACAGTCCCCAGGTTGATACCTGGTCCCCAGGTGGCTACCCAATCTGCAGGGTAACATTAGGCCCCTGTAGAATCCCAGGCTGCGAGTGGATTCCTAGGCCCCTGGTGAACATCAGGTGCAGGTGTCCAAGCAGGCCCTGGGTGGACATAACTGTGTACAGGTAAGGAGTTGACCTGTGGGGAGGGTGAGCAGTCAGCAGCCCACTGGGGTCCTGAGAAGGTTTTCTGGAAGGAGGAGGCCGAGGGGATGGAAACTTAAAGAAGCGACCTCACTTCCTTGGCAACAAACCCTAACAGAACTTAGAATTCTGGTAACCAggccaggcacggtggctcacacctgtaatcccagcactttgggaggccgaggcaggaggatcatgaaatcaggagatcgagaccagcttgaccaacatggtaaaaccac-atgtctactaaaaata i panPan2.chr2B C 0 C 0 s ponAbe2.chr9 116159273 644 - 135191526 GGCCATCAGGCCACAGCTGGATACAAGTCCCCGGGGAACACAAGGCCCCAGTGGGACACAGATCTAAGGCAGACATCAGGCCCCAGGTGGACATACAGGCATGAGGTGGAATTCACCCTGAGGGGGACATTCGGCCCCAGGTATGCATCAGGCCTCAGGTGAATAACCAGTCCCCAGGTGGACATTAGCCTGCAAGTCAACCACAGTCCCCAGGTTGATACCTGGTCCCCAGGTAGCTACCCAATCTGCAGGGTAACATTAGGCCCCTGTAGGATCCCAGGCCCCAAGTGGATTCCTAGGCCCCTGATGAACATCACGTGCAGGTGTCCAAGCAGGCCCTGGGTGGACATAACTGTGTACAGGTAAGAAGTTGACCTGTGGGGAGGGTGAGCAGTCAGCAGCCCACTGGGGTCCTGAGTAGGTCTTCTGGAAGGAGGAGGCTGAGGGGATGGAATCTTAAAGAAGCGACCTCACTTCCTTGGCAACAGACCCTAAGAGAACTTAGAATTCTGGTAACCAggccaggcatggtggctcacacctgtaatcccagcactttgggaggctgaggcaggaggatcatgaaatcgggagatcgagaccagcctgaccaacatggtaaaaccag-atgtctactaaaaata i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 274546 641 + 1485088 GGTCATCAGGCCACAGCTGGATACCAGTCCCCAGTGAACACAAGGCCCCAGTGGGACATAGATCTAAGGCAGACATCAGGCCCCAGGTGGACATACAGGCCTGAGGTGGAATTCACCCTGAGGGGGACATT-GGCCCCAGGTGCGCATCAGGCCTCAGGTGAATAACCAGTCCCCAGGTGGACATTAGCCCGCAGGTCAGCCACAGTCCCCACGTTGATACCTGGTCCCCAGGTGGCTACCCAATCTGCAGGGTGACATTAGGCCACTGTAGGATCCCAGGCCCCAAGTGGATTCCTAAGCCCCTGGTGAACATCAGGTGCAGGTGTCCAAGCAGGCCCTGGGTGGACATAACTGTGTACAGGTAAGGAGTTGACCTGTGGGGAGGGTGAGCAGTCAGCAGCCCACTGGGGTCCTGAGTAGGTCTTCTGGAAGGAGGAGGCCGAGGGGATAGAAACTTAAAGAAGTGACCTCACTTCTTTGGCAACAGACCCTAACAGAACTTAGAATTCTGGTAACCAggccaggcacagtggctcacacctgtaatcccagcactttgggaggccgaggcagaaggatcatgaaatcaggagattgagaccagcctgatcaacatggtaaaaccac---gtctactaaaaata i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 20813 638 + 30162 GGTCATCAGGACACAGCTGGATACAAGTCCCTGGTGAATGCAAGGCCCTAGTGGGACATAGATCTAAGGCAGACATCAGGTCCCAGGTGGACATACAGACCTGAGGTGGAATTCATCCTGAGGGGGACATTCGGCCCCAGGTGCACATAGGGCCCCAGGTGAATACCCAGTCCCTAGGTGGACATCAGCCCACAGGTCAACCACAGTCCCCAGGTTGATACCTGGTCCCCAGGAAGCTACCCAATCTGCAGGGTAACATTAGGCCCCTGTAGGATTCCAGGCCCCAAGTGGATTCCTAGGCCCATGGTGAACATCAGGTGCAGGTGTCCAAG-AGGCCCTGGGTGGACATAACTGTGTACAGGTAAGGAGTTGACCTGTGGGGAGGGTGAACAGTCAGCAGCCCAGTGGGGTCCTGAGTAGGTCTTCTGGAAGGAGGAGACTGAGGGGATGGAAACTTAGAGAAGTAACCTCACTTCCTTGGCGACAGA-ACTAAGGGAACTTAGAATTTTGGTAAACAGGCCA-----Agtggctcacatctgcaatctcagcactttgggaggctgaggtgggcagatcatgaggtcaggagtttgagaccagcctgatcaaaatggtaaaacccccatctctactaaaaata i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 45044 644 - 323133 GGTCATCAGGCCACAGCTAGATACAAGTCCCTGGTGAACATAAGGCCCCAGTGGGACATAGATCTAAAGCAGACATCAGGCCCCAGGTGAACATACAGACCCGAGGTAGAATTCACCCTGAGGGGAATATTTGGCCCCAGGTGCACATCAGGCCCCAGGTAAATACCCAGTCCCCAGGAGGACATCAGCCCGCAGGTCAACCACAGTCCCCAGGTTGATACCTGGTCCCCAGGTGGCTACCCAGTCTGCAGGGTAACATTAGGCCCATGTAGGATCCCAGGCCCCAAGTGGATTCCTAGGCCCCTGGTGAACATCAGGCACAGGTGTCCAAG-AGGCCCTGGGGAAACATAACTGTGTACAGGTAAGAAGTTGACCTGTGGGGAGGGTGAGCAGTCAGCAGCCCAGTGGGGTCCTGAGTAGGTCTTCTGGAAGGAGGAGACTGAGGGGATGGAACCTTAAAGAAGTAACCTCACTTCCTTGGCGACAGACCCTGATGGAACTTAGAATTGTGGTAACCAggccaggcacagtggctcacacctgtaatcccagcactttgggaggccgaggtgggcagatcatgaggtcaggagttcgagaccagcctgaccaacatggtaaaacccctatctctactaaaaata i cerAty1.NW_012003779v1 C 0 I 7 s colAng1.NW_012118199v1 554414 627 - 854822 GGTCATCAGGCCACAGCTAGATACAAGTCCCTGGTGAACATATGGCCCCAGTGGGACATAGATCTA-----------AGGACCCAGGTGAACATACAGACCCGTGGTGGAATTCACCCTGAGGGGAACATTCGGCCCCAGGTGCACATCAGGCCCCAGGTAAATACCCAGTCCCCAGGTGGACATCAGCCCACAGGTGAACCACAGTCCTTAGGTTGATACCTGGTCCCCAGGTGGCTACCCAGTCTGCAGGGTAACATTAGGCACATGTAGGATCTCAGGCACCAAGTGGATTCCTAGGCCCCTGGTGAACATCAGACACAGGTGTCCAAG-AGGCCCTGGGGAAACATAACTGTTTACAGGTAAGGAGTTGACCTGTGGGGAAGGTGAGCAGTCAGCAGCCCAGTGGGGTCCTGAGTAGGTCTTCTGGAAGGAGGAGGCTGAGGGGATGGAACCTTAAAGAAGTAACCTCACTTCCTTGGCAACAGACCCTAATGGAACTTAGAATTTTGGTAAACAGGCCA-----ggtggctcacacctgcaatcccagcactttgggaggccgaggtgggcagatcatgaggtcaggagttccagaccagcctgaccaacatggtaaaacctc-atctctactaaaaata i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=8232.000000 s hg38.chr9_KI270719v1_random 104436 5 + 176845 caaaa s panTro5.chr9 41279849 5 + 116767853 caaaa i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132573235 5 + 247869975 caaaa i panPan2.chr2B C 0 C 0 s ponAbe2.chr9 116159917 5 - 135191526 caaag i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275187 5 + 1485088 caaaa i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 21451 5 + 30162 caaaa i macFas5.chr9_KE145707_random C 0 C 0 s colAng1.NW_012118199v1 555041 4 - 854822 -aaaa i colAng1.NW_012118199v1 C 0 I 1 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e cerAty1.NW_012003779v1 45688 7 - 323133 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=910.000000 s hg38.chr9_KI270719v1_random 104441 1 + 176845 a s panTro5.chr9 41279854 1 + 116767853 a i panTro5.chr9 C 0 C 0 s ponAbe2.chr9 116159922 1 - 135191526 a i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275192 1 + 1485088 a i nomLeu3.chrUn_GL397501_2 C 0 C 0 s colAng1.NW_012118199v1 555046 1 - 854822 a i colAng1.NW_012118199v1 I 1 I 9 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e panPan2.chr2B 132573240 0 + 247869975 C e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e cerAty1.NW_012003779v1 45688 7 - 323133 I e macFas5.chr9_KE145707_random 21456 0 + 30162 C e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=780.000000 s hg38.chr9_KI270719v1_random 104442 2 + 176845 gc s panTro5.chr9 41279855 2 + 116767853 ac i panTro5.chr9 C 0 C 0 s ponAbe2.chr9 116159923 2 - 135191526 ac i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275193 2 + 1485088 ac i nomLeu3.chrUn_GL397501_2 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e panPan2.chr2B 132573240 0 + 247869975 C e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 555047 9 - 854822 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e cerAty1.NW_012003779v1 45688 7 - 323133 I e macFas5.chr9_KE145707_random 21456 0 + 30162 C e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=115386.000000 s hg38.chr9_KI270719v1_random 104444 240 + 176845 aaacaaggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtagtggtgggcgcctatagtcccagctactcggggggctgaggcaggagaaaggcatgaacccaggacacggagcttgcagtga-cccagatcacgccactgcactccatccagcctgggtgacagagcgagactctgtctcaaaacagacaaacaa----------ac s panTro5.chr9 41279857 237 + 116767853 aaacaaggtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtagtggtgggcgcctatagtcccagctactcgggaggctgaggcaggagaaagacatgaacccaggacacggagcttgcagtgagcccagatcacgccactgcactccatccagcctgggtgacagagtgagactctgtctcaaa----acaaacaa----------ac i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132573240 237 + 247869975 aaacaaggtcaggaaatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaaattacccgggcgtagtggtgggcgccagtagtcccagctactcgggaggctgaggcaggagaatggcacgaacccgggacgcggagcttgcagtgagccaagatcgcaccactgcactccatccagcctgggcgacagagcgaaactctgtctacaa----aaaaacaa----------aa i panPan2.chr2B C 0 C 0 s ponAbe2.chr9 116159925 247 - 135191526 aaacaagggcaggagatcgagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaaattagccaggcgtagtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccgggacgcggagcttgcagtgagccaagatcgcgccattgcactccatccagcctgggcgagagagcgagactctgtcttaaa----aacaacaacaacaacaacaa i ponAbe2.chr9 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 555047 9 - 854822 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e cerAty1.NW_012003779v1 45688 7 - 323133 I e macFas5.chr9_KE145707_random 21456 0 + 30162 C e nomLeu3.chrUn_GL397501_2 275195 0 + 1485088 C e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=465.000000 s hg38.chr9_KI270719v1_random 104684 7 + 176845 aaaca--aa s panTro5.chr9 41280094 7 + 116767853 aaaca--aa i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132573477 7 + 247869975 caaaa--ca i panPan2.chr2B C 0 C 0 s ponAbe2.chr9 116160172 9 - 135191526 caacaacaa i ponAbe2.chr9 C 0 C 0 s macFas5.chr9_KE145707_random 21456 7 + 30162 aaatt--aa i macFas5.chr9_KE145707_random C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 555047 9 - 854822 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e cerAty1.NW_012003779v1 45688 7 - 323133 I e nomLeu3.chrUn_GL397501_2 275195 0 + 1485088 C e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=4466.000000 s hg38.chr9_KI270719v1_random 104691 15 + 176845 aaac---aaacacaaaaa s panTro5.chr9 41280101 14 + 116767853 aaac---aaacac-aaaa i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132573484 13 + 247869975 aaac----aacac-aaaa i panPan2.chr2B C 0 C 0 s ponAbe2.chr9 116160181 15 - 135191526 aaat---aatcacaaaaa i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275195 15 + 1485088 aaac---aaacacaaaaa i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 21463 12 + 30162 aaattagaaaca------ i macFas5.chr9_KE145707_random C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 555047 9 - 854822 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e cerAty1.NW_012003779v1 45688 7 - 323133 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=295483.000000 s hg38.chr9_KI270719v1_random 104706 128 + 176845 aactagccaggtgttgtggtgcatgtcttgggcctgtaatcccagctactcaggagactgaggcaggagaattgattgaacccaataggcggaagttgcagtgagccgagatcatgccactgcactcc s panTro5.chr9 41280115 128 + 116767853 aactagccaggtgttgtggtgcgtgtctcatgcctgtaatcccagctactcaggagactgaggcaggagaattgattgaacccaataggcagaagttgcagtgagccgagatcatgccactgcactcc i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132573497 128 + 247869975 aactagccaggtgtggtggtgcgtgtctcatgcctgtaatcccagctactcaggagactgaggcaggataattgattgaacccagtaggcggatgttgcagtgagccgagatcatgccactgcactcc i panPan2.chr2B C 0 M 1130 s ponAbe2.chr9 116160196 128 - 135191526 aactagccaggtgtggtgatgtgtgtttcgtgtctgtaatcccagctactcagaagactgaggcaggagaactgattgaacccagtaggcagatgttgcagtgagccgagatcatgccactgcactcc i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275210 128 + 1485088 aactagccacgtgtggtggtgcatgtcttgtgcctgtaatcccagctactcaggagactgaggcaggagaattgattgaacccagtaggcggaggttgcagtgagccaagatcatgccactgcactcc i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 21475 128 + 30162 atctagctgagtgtggtggtgcgcgcctcgtgcctgtaatctcagctactcaggagactgaggcaggagaattgattgaacccaggaggcggaggttgcagtgagctgagatcgtgccactgcactcc i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 45695 128 - 323133 aactagccgggtgtggtggtacacatctcgtgcttgtaatcccagctactcaggagattgaggcaggagaattaattgaacccaggaggcggaggttgcagtgagccaagatcgtgccactgcactcc i cerAty1.NW_012003779v1 I 7 C 0 s colAng1.NW_012118199v1 555056 128 - 854822 aactagccaggtgtggtggtacacgcctcgtgcttgtaattccagctactcaggagactgaggcaggagaattaattgaacccaggaggcagaggttgcagtgagccaagatcatgccactgcactcc i colAng1.NW_012118199v1 I 9 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=37924.000000 s hg38.chr9_KI270719v1_random 104834 29 + 176845 accctggccaacagaatgagacaatgtct s panTro5.chr9 41280243 29 + 116767853 accctggccaacagaatgagacaatgtct i panTro5.chr9 C 0 C 0 s ponAbe2.chr9 116160324 29 - 135191526 agcctggccgacagaatgagactatgtct i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275338 27 + 1485088 agcctggccaacagaatgagac--tgtct i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 21603 29 + 30162 agcctgggcaacagaatgagactctatct i macFas5.chr9_KE145707_random C 0 C 0 s cerAty1.NW_012003779v1 45823 29 - 323133 agcctgggcaacagaatgaaactctatct i cerAty1.NW_012003779v1 C 0 C 0 s colAng1.NW_012118199v1 555184 27 - 854822 agcctgggcaatagaatgagactctat-- i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 8225 4626 + 19535 I e panPan2.chr2B 132573625 1130 + 247869975 M e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=1883.000000 s hg38.chr9_KI270719v1_random 104863 1 + 176845 c s panTro5.chr9 41280272 1 + 116767853 c i panTro5.chr9 C 0 C 0 s ponAbe2.chr9 116160353 1 - 135191526 c i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275365 1 + 1485088 c i nomLeu3.chrUn_GL397501_2 C 0 I 3 s macFas5.chr9_KE145707_random 21632 1 + 30162 c i macFas5.chr9_KE145707_random C 0 I 11 s cerAty1.NW_012003779v1 45852 1 - 323133 c i cerAty1.NW_012003779v1 C 0 C 0 s papAnu3.chrUn_NW_003880647v1 12851 1 + 19535 c i papAnu3.chrUn_NW_003880647v1 I 4626 I 3730 s colAng1.NW_012118199v1 555211 1 - 854822 t i colAng1.NW_012118199v1 C 0 I 3 e panPan2.chr2B 132573625 1130 + 247869975 M e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=34177.000000 s hg38.chr9_KI270719v1_random 104864 26 + 176845 aaaaaaaaaaaaaaaaagaaTCCCGA s panTro5.chr9 41280273 26 + 116767853 aaaaaaaaaaaaaaaaagaaTCCCGA i panTro5.chr9 C 0 C 0 s ponAbe2.chr9 116160354 23 - 135191526 ---aaaaaaaaaaaaaTGAATTCCGA i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275369 26 + 1485088 aaaaaaaaaaaaaaaaagaaTTCCGA i nomLeu3.chrUn_GL397501_2 I 3 C 0 s macFas5.chr9_KE145707_random 21644 26 + 30162 aaaaaaaaaaaaaaaaaGAATTCTGG i macFas5.chr9_KE145707_random I 11 C 0 s cerAty1.NW_012003779v1 45853 24 - 323133 --aaaaaagaagaagaaTTATTCTGG i cerAty1.NW_012003779v1 C 0 C 0 s colAng1.NW_012118199v1 555215 26 - 854822 aaaaaaaaaaagaagaagaTTTCTGG i colAng1.NW_012118199v1 I 3 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132573625 1130 + 247869975 M e rhiRox1.KN298119v1 9225 11886 - 60063 I e chlSab2.chrUn_KE147573v1 23350 119 + 85383 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=566586.000000 s hg38.chr9_KI270719v1_random 104890 259 + 176845 TAACCAGGCACCCACATCCTAGAGTTAGCCCTGTAGCCAGCTCACTTGGTGGGAGATGCTCAAGAGAGCAAGACGTTCTTGTGCTGCATCCCCACATCTCAAGGCTCCTGCTTCAGGAATGGCAGGAGTGAGAGCCTTTCTTTTCCAACGATGCCCTTGTAAGCTCATCGCTCACTCCAGATGCCTCTGGCCATTTGACAGAAGG-TCCCCCCAGG-------TACCACAGGACAGGAGTCACCAGGTAGACATCAGG-CCCCAGATG s panTro5.chr9 41280299 259 + 116767853 TAACCAGGCACCCACATCCTAGAGTTAGCCCCATAGCCAGCTCACTTGGTGGGAGATGCTCAAGAGAGCAAGATGTTCTTGTGCTGCATCCCCACATCTCAAGGCTCCTGCTTCAGGAATGGCAGGAGTGAGAGCCTTTCTTTTCCAACGATGCCCTTGTAGGCTCATCCCTCACCCCAGATGCCTCTGGCCATTTGACAGAAGG-CCCCCCCAGG-------TACCACAGGACAGGAGTCACCAGGTAGACATCAGG-CCCCAGATG i panTro5.chr9 C 0 C 0 s ponAbe2.chr9 116160377 259 - 135191526 TAACCAGGCACCCATATCCTAGAGTTAGCCCCATAGCCAGCTCACTTGGCTGGAGATGCTCAAGACAGCAAGATGTTTTTGTGCTGCATCCCCACATCTCAAGGCTCCTGCTTCAGGAATGGCAGGAGTGAGAGCCTTTCTTTTCCGATGATGCTCTTGTAGGCTCATCCCTCACCCCAGATGCCTCTGGCCATTTGGCAGAAGG-CCCCCCCAGG-------TACCACAGGACAGGAGTCACCAGGTAGACATCAGG-CCCTAGATG i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275395 259 + 1485088 TAACCAGGCACCCACATCCTTGAGTTAGCCCCATAGCCAGCTCACTTGGTGGGAGATGCTCAAGAGAGCAAGATGTTATTGTGCTGCATCCCCACATCTCAAGGCTCCTGCTTCAGGAATGGCAGGAGTGAGAGCCTTTCTTTTCCGATGATGCCCTTGTAGGCTCATCCCTCACCCCAGATGCCTCTGGCCATTTGGCAGAAGG-CCCTCCCAGG-------TACCACAGGACAGGAGCCAACAGGTAGACATCAGG-CCCCAGATG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr9_KE145707_random 21670 265 + 30162 TAACCAGGCACCCACATCCTAGAGTCAGCCCCATAGCCTGTTCACTTGGTGGGAGATACTCAAGAGAGCAAGATGTTCTCGTGCTGCATCCCCACATCTCAAGGCTCCTGCTTCAGGAATGGTGGGAGTGAGCGCCTTTCTTTTCCAGTGATGCCCATGTATGCTCATACCTCACTCCAGATGCCTCTGGCCATTTGGCAGAAG---CCCCCCAGGCCCCAGGTAGCACAGGACAGGAGTCACCAGGTAGACATCAGGCTCGCAggtg i macFas5.chr9_KE145707_random C 0 N 0 s cerAty1.NW_012003779v1 45877 263 - 323133 TAACCAGGCACCCACATCCTAGGGTCAGCCCTGTAACCAGCTCACTTGGTGGGAGACGCTGAAGAGAACAATATATTTCTGCGCTGCATCCCCACATCTCGAGGCTGCTGCTTCAAGAATGGCAGGAGTGAGAGACTTTCTTTTACGACGATGCCCATGTAGGCTCATCCCTCACCCCAGATGCCTCTGGCCATGTGGCAGAAGG-CCCCCCCAATTACC---TACCACAGGACAGGAGTCACCAGGTAGACAGCAGG-TCCCAGATG i cerAty1.NW_012003779v1 C 0 I 19 s chlSab2.chrUn_KE147573v1 23469 260 + 85383 TAACCAGGCACCCACATCCTAGGGTCAGCCCTGTAACCAGCTCACTTGGTGGGAGACGCTCATGAGAACAAGATGTTCCTGCGCTGCATCCCCACATCTCGAGGCTGCTGCTTCAGGAATGGCAGGAGTGA--GACTTTCTTTTACGACGATGCCCATGTAGGCTCATCCCTCACCCCAGATGCCTCTGGCCATGTGGCAGAAG--CCCCCCCAGTTACC---TACCACAGGACAGGAGTCACCAGGTAGACAGCAGG-TCCTAGATG i chlSab2.chrUn_KE147573v1 I 119 I 19 s colAng1.NW_012118199v1 555241 264 - 854822 TAACCAGGCACCCACATCCTAGGGTCAGCCCCATAGCCAGCTAACTTGGTGGGAGATGCTCAAGAGAACAAGATGTCCTCATGCTGCATCTCCACATCTCAAGGCTGCTGCTTCAGGAATGGTAGGAGTGAGAGCCTTTCTTTTATGACGATGCCCATGTATGTTCATCTCTCACCCCAGATGCCTCTGGCCACGTGGCACAAAGCCCCCCCCAGGTACC---TACCACAGGACAGGAGCCACCAGGTAGACAGCAGG-TCCCAGATG i colAng1.NW_012118199v1 C 0 I 19 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132573625 1130 + 247869975 M e rhiRox1.KN298119v1 9225 11886 - 60063 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=530313.000000 s hg38.chr9_KI270719v1_random 105149 233 + 176845 GAGC--TACCAGGCCAGGCCTCACCAGTGATCCCACCAGGGCCACATCTGCACATTGTCCTTGTCCAGCTGGAGCCTCTGGAGCTCATTGAGACACAGGCACATGGTGAGGTCACCTGCAGTCTGGAAGTCTTTCCAGGGACAATGTTTTCAGGCTGAAATTCCTTTAAATTCAGTGAGGTTGTTTTCATGTTTGGAAATTCCAGTGGAAAGTGAGTGATATTGGTGAC-CTCTCT s panTro5.chr9 41280558 233 + 116767853 GAGC--TACCAGGCCAGGCCTCACCAGTGATCCCACCAGGGCCACATCTGCACATTGTCCTTGTCCAGCTGGAGCCTCTGGAGCTCATTGAGACACAGGCACATGGTGAGGTCACCTGCAGTCTGGAAGTCTTTCCAGGGACAATGTTTTCAGGCTGAAATTCCTTTAAATTCAGTGAGGTTGTTTTCATGTTTGGAAATTCCAGTGGAAAGTGAGTGATATTGGTGAC-CTCTCT i panTro5.chr9 C 0 C 0 s ponAbe2.chr9 116160636 233 - 135191526 GAGC--TACCAGGCCAGGCCTCACCAGTGATCCCACCAGGGCCACATCTGCACATTGTCCTTGTCCAGCTGGAGCCTCTGGAGCTCATTGAGACACAGGCACATGGTGAGGTCACCTGCAGTCTGGAAGTCTTTCCAGGGACAATGTTTTCAGGCCGAAACTCCTTTAAATTCAGTGAGGTTGTTTTCATGTTTGGAAATTCCAGTGGAAAGTGAATGATATTGGTGAC-CTCTCT i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275654 233 + 1485088 GAGC--TACCAGGCCAGGCCTCACCAGTGATCCCACCAGGGCCACATCTGCACATTGTCCTTGTCCAGCTGGAGCCTCTGGAGCTCATTGAGACACAGGCACATGGTGAGGTCACCTGCAGTCTGGAAGTCTTTCCAGGGACAATGTTTTCAGGCTGAAATTCCTTTAAATCCAGTGAGGTTGTTTTCATGTTTGGAAATTCCAGTGGAAAGTGAGTGATATTGGTGAC-CTCTCT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28739451 235 + 96509753 aagtcctgccaggccaggccTCACATGTTATCCTGTCAGGGCCACATCTGTGCATTGTCCTTGGCCAGCTGGAGCCTCTGGACTTCCTCTAGGCACAGGCACATGGTGAGGTGGCCTGTAGTCTTGGAGACTTTCTGGGAGCAATGTTTTCTGGTTGGAATTCCTTT-CATTTAGTGCGGTTGTTTCCATGTGTGGAAATTCCAGTGGAAAGTGACTGACATTGGGAACTCTTTCT i macFas5.chr10 N 0 C 0 s cerAty1.NW_012003779v1 46159 231 - 323133 GAGC----TCAGGCCAGGCCTCACCAGTGATCCCACCAGTGCCGCATCTGCACATTGTCCTTGTCCAGCTGGAGCCGCTGGAGCTCATTGAGACACAGGCACGTGGTGAAGTCACCTGCAGTCTGGAAGACTTTCCAGGGTTGATGTTTTCAGGCTGAAATTCCTTTAAATTCAGTGAGGTTGTTTTCATGTTTAGAAATTCCAGTGGAAAGTGAGTGATATTGGTGAC-CTTTCT i cerAty1.NW_012003779v1 I 19 N 0 s chlSab2.chrUn_KE147573v1 23748 233 + 85383 GAGC--TACCAGGCCAGGCCTCACCAGTGATCCCACCAGTGCCACATCTGCACATTGTCCTTGTCCAGCTGGAGCCTCTGGAGCTCATTGAGACACAGGCACATGGTGAAGTCACCTGCAGTCTGGAAGGCTTTCCAGGGTTGATGTTTTCAGGCTGAAATTCCTTTAAATTCGGTGGGGTTGTTTTCATGTTTAGAAATTCCGGGGGAAAGTGAGTGATATTGGTGAC-CTTTCT i chlSab2.chrUn_KE147573v1 I 19 C 0 s colAng1.NW_012118199v1 555524 233 - 854822 GAGC--TGTCAGGCCAGGCCTCACCAGTGATCCCACCAGTGCCACATCTGCACATTGTCCTTGTCCAGCTGGAGCCTCTGGAGCTCATCGAGACACAGGCAAATGATGAAGTCACCTGCAGTCTGGAAGACTTTCCAGGGTTGATGTTTTCAGGCTGAAATTCCTTTAAATTCAGTGAGGTTGTTTTCATGTTTAGAAATTCCAGTGGAAAGTGAGTGATATTGGTGAC-CTTTCT i colAng1.NW_012118199v1 I 19 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132573625 1130 + 247869975 M e rhiRox1.KN298119v1 9225 11886 - 60063 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=302411.000000 s hg38.chr9_KI270719v1_random 105382 196 + 176845 CCTTTTGCAGCTCCTGCTTCAGGTGCAGAAACACAGCTATTTccagtgccagctgttgagccagtgccagcaccaggggcagagccccttccagggacagcgcTGGAGCTAGAGGAAGCTCCAGAGCCCTCCTGCCGCTGCCCTGGGACTGCACAGGACCAGCCTAGTGAGAAGCTGCCTGACTTCATGGCACCTC s panTro5.chr9 41280791 196 + 116767853 CCTTTTTCAACTCCTGCTTCAGGTGCAGAAACACAGCTATTTccagtgccagctgttgagccagtgccagcaccaggggcagagccccttccagggacagcgcTGGAGCTAGAGGAAGCTCCAGAGCTCTCCTGCCGCTGCCCTGGGACTGCACAGGACCAGCCCAGTGAGAAGCTGCCTGACTTCATGGCACCTC i panTro5.chr9 C 0 C 0 s ponAbe2.chr9 116160869 195 - 135191526 CCTTTTTCAGCTCCTGCCTCAGGTGCAGAAATACAGCTATTTCCAGTTCCAGCTGTTGAGCCAGTGCCAGCACCAGGGGCAGAGCCCCCTCCA-GGACAGCGCTGGAGCTAGAGGAATCTCCAGAGACCTCCTGCCACTGCCCTGGGACTGCCCAGGACCAGCCCAGTGAGAAGCTGCTTGACTTCATGGCACCTC i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 275887 190 + 1485088 CCTTTTTCAGCTCCTGCTTCAGGTGCAGAAATACAGCTATTTCTAGTGCCACCTGTTGAGCCAGTGCCAGCACCAGGGGCAGGGCCCCCTCCAAGGACAGCGCTGGAGCTAGAGGAAGCTCCAGAGCCCTCCTGCCGCTGCC------CTGCTCAGGACCAGCCCAGTGAGGAGCTGCCTGACTTCATGGCACCTC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28739686 189 + 96509753 TCTTTTTCAGCTCCTGCTCAGTGTGCAGCAATACAGGACCTTCCAGCACCATCTGATGAGCCAGTGCCAGCACTAGGGGAAGAGCCCC-TTCAGGGACAGAACTGGAGCTAGAGGCAGCTC-----CCCTCCTGCCCTT-GCCTGGTCCTGCCAAGGACCAGCCCATTAAGGAGCTGCCTGACATCATGGCACCTG i macFas5.chr10 C 0 C 0 s chlSab2.chrUn_KE147573v1 23981 195 + 85383 CCTTTTTCAGCTCCTGCTTCAGGTGCAGAAATACAGCTATTTCCAGTGCCAGCTGTTGAGCCAGTGCCAGCACCAGGGGAAGGACCCC-TCCAGGGACAGTGCTTGAGCTAGAGGCAGCTCCAGAGCCCTCCTGCCCCTGGCATGGGATTGCCCAGGAGCAGCCCAGTGAGGAGCTGCCTGACTTCATAGCACCTG i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 555757 195 - 854822 CCTTTTTCACCTCCTGTTTCAGGTGCAGAAATGCAGCTATTTCCAGTGCCAGCTGTTGAGCCAGTGCCAGCACCAGGGGAAGGGCCCC-TCCAGGGATAGTGCTGGAGCTAGAGGCAGCTCCAGAGCCCTCCTGCCCCTGCCATGGGACTGCCCAGGACCAGCCCAGTGAGGAGCTGCCTGACTTCATGGCACCTG i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132573625 1130 + 247869975 M e rhiRox1.KN298119v1 9225 11886 - 60063 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=3287873.000000 s hg38.chr9_KI270719v1_random 105578 1545 + 176845 CTGTAGAGCCACTGGCCTCAGCCctggagctgaaagtgtggctggagctagaggtggCAGAGAGGGGGTGACCAGCACAGCTCCAGCCAGCAGCTCCCACACTGCTCCCAGTCCTGGGCACAGTGGAAGCTATGGAGGCAGAGACCAGGGTGTGCAACCTGGGCTCCTCTGCCTCACTGGAGAGGGACTTCTCTCATTCAGCAGAGCAGCAGCCCTGCTGCTGAAGGCCCTGCCGCTACTGCT---GCTGGAGGTGTTTGCCTGCCTGCAGGAGGTGCTGGAGAGCAAGAAAAGGAGCCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGCGACCTCC--TCCTCC-----AGGAATGGAGGTTTGCCCTCAGCTGGGCATCTGGGCCATTTGCCTCTAATGTGCTGCCCAGGATGGCCTCTTCTTGACAGGTGGACAGG-----------------GGTTGAGGGGGCCAGGGGGCATCTCCAAAG------------GAAGCTCTTAAACTCAGCAGCAGCACTCCAGAATC-----TCCATGCCTGCACCTGCCCAAGGATTTATTCATAGCTTAACTAAGAATTTCAAATTTCTACCATAACACTGAAATAAAGTTTGACTTTTTGAAACTTCCATGacttctttcactccctaatattgt-agatggtgtttttgaggtgacgttgaaaacctctgatagttgtgtat-tttgttgtggttctttgggtgattaaattaccatctgatcaagtgatattgaaaacccttcaggtatggcttttagaagactttgacctatttttgcttgtgttgactctccctccagct--ttgtggaaagagggatcatgtaggttcatttctcaggcagatcagtcaccttttgctatcaaagttttagcatc--catttcga-aaatttgatgtacaagttgatatTTTGGTGTTTTTAGCTAATCTGGG-GTCAAaacagaatgccatagatgaggaagcttataaacaaatttgtttctctctgttctggagatggcaaaattcaaggtcaagtggttagcagattccatgtctggtgtgggcttgctttgtggttcatagacagccatgtttctaccatgtcctcacatgacagaagggatgagggagctttctatggtgccttcaataggggctactaatcccactcctgtggtccctgccttcatgatctaatcattccccaaggccctacctccaaatatcatcacatagggaattagatttcagcacttgaatttgagggggacaataacatttggtctgtagcatcaggttacccagagccttatgcattcggaggaaatccaaaatcttctataagtgtttgctggtcccctccgggcttaggggaatctttaattgcagctcttgattcagcttggtccaagccgaaattctacgtttgcctg-------------agtaacttgttcatgggacagagggaagtatagaggcaactgaccatttggagt-ttaggacaattgatggaagagggcttggcatctggatg---agaagtggagggagaatagaacaaaggcacagaaggaga--gagcac s panTro5.chr9 41280987 1539 + 116767853 CTGTAGAGCCACCGGCCTCAGCCctggagctgaaagtgtggctggagctagaggtggCAGAGAGGGGGTGACCAGCACAGCTCCAGCCAGCAGCTCCCACACTGCTCCCAGTCCTGGGCACAGTGGAAGCTATGGAGGCAGAGACCAGGGTGTGCAACCTGGGCTCCTCTGCCTCACTGGAGAGGGACTTCTCTCATTCAGCAGAGCAGCAGCCctgctgctgaaggccctgctgctactgct---gctgGGGGTGTTTGCCTGCCTGCAGGAGGTGCTGGAGAGCAAGAAAAGGAGCCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGTGACCTCC--TCCTCC-----AGGAATGGAGGTTTGCCCTCAGCTGGGCATCTGGGCCATTTGCCTCTAATGTGCTGCCCAGGATGGCCTCTTCTTGACAGGTGGACAGG-----------------GGTTGAGGGGGCCAGGGGGCATCTCCAAAG------------GAAGCTCTTAAACTCAGCAGCAGCACTCCAGAATC-----TCCATGCCTGCACCTGCCCAAGGATTTATTTATAGCTTAACTAAGAATTTCAAATTTCTACCATAACACTGAAATAAAGTTTGACTTTTTGAAACTTCCACGacttctttcactccctaatattgt-agatggtgtttttgaggtgacgttgaaaacctctgatagttgtgtgt-tttgttgtggttctttgggtgattaaattaccatctgatcaagtgatattgaaaacccttcaggtatggcttttagaagactttgacctatttttgcttgtgttgactctccctccagct--ttgtggaaagagggatcatgtaggttcatttctcaggcagatgagtcaccttttgccatcaaagttttagcatc--catttcga-aaatttggtgtacaagttgatatTTTGGTGTTTTTAGCTAATCTGGG-GTCAAaacagaatgccatagatgaggaagcttataaacaaatttgtttctctctgttctggagatggcaaaattcaaggtcaagtggttagcagattccatgtctggtgtgggcttgctttgtggttcat----agccatgtttctaccatgtcctcacatgacagaagagatgagggagctctctatggtgccttcaataggggctactaatcccactcctgtggtccctgccttcatgatctaatcattccccaaagccctacctccaaatatcatcacatagggaattagatttcaacacttgaatttgagggggacaataacatttggtctatagcatcaggttacccagagccttatgcattcagaggaaatccaaaatcttctataagtatttgctggtcccctctgggcttagggaaatctttaattgcagctcttgattcagcttggtccaagccgaaattctacgtttgcctg-------------agtaacttgttcatgggacagagggaagtatagaggcaactgaccatttggagtattaggacaattgatggaagagggcttggcatctggatg---agaagtggagggagaatagaacaaaggcac---aggaga--gagcac i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132574755 1557 + 247869975 CTGTAGAGCCACCGGCCTCAGCCctggagctgaaagtgtggctggagctagaggtggCAGAGA-GGGGTGACCAGCACAGCTCCAGCCAGCAGCACCCACACTGCTCCCAGTCCTGGGCACAGTGGAAGCTATGGAGGCAGAGACCAGGGTGTGCAACCTGGGCTCCTCTGCCTCACTGGAGAGGGACTTCTCTCATTCAGTACAGCAGTAGCCctgctgctgaagggcatgctgctactgct---gctgGGGTTGTTTGCCTGCCTGCAGGAGGTGCTGGAGAGCAAGAAAAGGAGCCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGCGACCTCC--TCCTCC-----ACGCATGGAGGTTTGCCCTCAGCTAGGCATCTGGGCCATTTCCCTCTACTGTGCTGCCCAGGATGGCCTCTTCTTGACAGGCAGATAGGATGGCCTCTTCTTGACAGGTGGAGGGGGCCA-GGGGCATCTCCAAAG------------GAAGCTTTTAAACTCAGCAGCTGCGCCCCAGAATC-----TCCATGCCTGCACCT----AAGGATTTATTCATAGCTTAACTAAGAATTTCAAATTTCTACCGTAACACTGAAATAAAGTTTGACTTTTTGAAACTTCCACGacttctttcactccctaatattgt-agatggtgtttttgaggcgatgttgaaaacctctgatagttgtgtgt-tttgttgtggttctttctgtgattaaattaccatctgatcaagtgatatggaaaacccttcaggtatggcttttagaagactttgacctatttttgcttttgttgactctccttccagct--ttgcggaaagagggatcatgtaggttcatttctcaggcagatcagtcaccttttgccatcaaagttttagcatc--catttcca-aaatttggtgtacaagttgatattttggtgttttcagttaatctggg-gtcaAaacagaatgccatagatgaggaagcttataaacaaatttgtttctctcagatctggagatagcaaaattcaaggtcaagtggttagcagattccaggtctggtgtgggcttgctttgtggttcatagacagccatgtttctaccatgtcctcacatgacagaagggatgagggagctctctatggtgccttcaataggggctactaatcccactcatgtggtccctgccttcacgatctaatcattccccaaggccctacctccaaatatcatcacatagggaattagatttcaacactggaatttgagggggacaataacatttggtctatagcatcaggttacccagagccttatgcactcagaggaaatccaaaatcacctataagtatttgctggtcccctctgggcttagggaaatctttaattgcagctctagattcagcttggtccaagcttaaattctacatttgcctg-------------cataacttgttcttgggacagagggaagtttagaggcaactgaccatttggagttttaggacaattgatggaagagggcttggtatctggatg---agaagtggagggagaatagaacaaaggcacagaaggaga--gagcac i panPan2.chr2B M 1130 C 0 s ponAbe2.chr9 116161064 1542 - 135191526 CTGTAGAGCCACCGGCCTCAGCCCTGGAGCTGAAAGTGTGGCTGGAGCTAGAGGTGGCAGAGAGGGGGTGACCAGCACAGCTTCAGCCAGCAGCTCCCACACTGCTCCCAGTCCTGGGCACAGTGGAAGCTATGGAGGGAGAGACCAGGGTGTGCAACCTGGGCTCCTCTGCCTCACTGGAGAGGGACTTCTCTCATTGAGCAGAGCAGCAGCCCTGCTGCTGAAGGGCCTGCTGCTACTGCT---GCTGGGGGTGTTTGCCTGCCTGCAGGAGGTGCTGGAGAGCAAGAAAAGGAGCCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGCGACCTCC--TCCTCC-----AGGAATGGAGGTTTGCCCTCAACTGGGCATCTGGGCCATTTTCCTCTAATGTGCTGCCCAGGATGGCCTCTTCTTGACAGGCGGACAGG-----------------GGTTGAGGGGGCCAGGGGGCATCTCCAAAG------------GAAGTTTTTAAACTCAGCAGCTGCACCCCAGAATC-----TCCATGCCTGCACCTGCCCAAGGATTTATTCATAGCTTAACTAAGAATTTCAAATTTCTACCATTACACTGAAATAATGTTTGACTTTTTGAAACTTCCATGacttctttcactccctaatattgt-agatggtgtttttgaggtgatgctgaaaacctctgatagttgtgtgt-tttgttgtggttctttgtgtgattaaattaccatctgatcaagtgatattgaaaacccttcaggtatggtttttagaagactttgacctatttttgcttgtgttgactctccctccagct--ttgtggaaagagggatcatgtaggttcatttctcaggcagatcagtcaccttttgccattaaagttttagcatc--catttcca-aaatttggtatagaagttgacatTTTGGTGTTTTTAGCTAATCTGGG-GTCAAaacagaatgacatagatgaggaagcttataaacaaatttgtt----tcagttctggagatggcaaaattcaaggtcaagtggttagcagattccatgtctggtgtgggcttgctttgtggttcacagacagccgtgtttctaccatgtcctcacatgacagaagggatggtggagctctctatggtgccttcaataggggctactaatcccactcatgtggtccctgccttcatgatctaatcattccccaaggccctacctccaaatatcatcacatagggaattagatttcaacacttgaatttgaaggggacaataacatttggtctatagcatcaggttacccagagccttatgcattcagaggaaatccaaaatcttctataagtattcactggtcccctttaggcttagggaaatcttcaattgcagctcttgattcagcttggttcaagcttaaattctacatttgcctg-------------aatagcttgttcatgggacacagggaagtttagaggcaactgaccatttggagttttaggacaattgatggaagaggggttggcatctggatg---agaagtggagggagaataggacaaaggcacagaaggaga--gagcac i ponAbe2.chr9 C 0 C 0 s nomLeu3.chrUn_GL397501_2 276077 1552 + 1485088 CGGTAGAGCCACCGGCCTCAGCCctggagctgaaagtgtggctggagctagaggtggCAGAGA-GGGGTGACCAGCACAGCTCCAGCCAGCAGGTCCCACACTGCTCCCAGTCCTGGGCACAGTGGACGCTATGGAGGCAGAGACCAGGGTGTGCAACCTGGGCTTCTCTGCCTCACTGGAGAGGGACTTCTGTCATTCAGCAGAGCAGCAGCCctgctgctgaagggcctgctgctactgct---gctgGGGGTGTTTGCCTGCCTGCAGGAGGTGCTGGAGAGCAAGAAAAGGAGCCTGTGAGCAGGGGTTCCAACAGGTCCTCCTACTCCCAGAGGCGACCTCCATGCCTCCTGGAGAGGCATGGAGGTTTGCCCTCAGCTAGGCATCTGGGCCATTTGCCTCTAATGTGCTGCCCAGGGTGGCCTCTTCTTGACAGGCGAACAGG-----------------GGGTGAGGGGGCCAGGGGGCATCTCCAAAG------------GAAGCTTTTAAACTCAGCAGCTGCACCCCAGAATC-----TCCACGCCTGCACCTGCGCAAGGATTTATTCATAGCTTAACTAAGAATTTCAAATTTCTACCATAACACTGAAATAAAGTTTGACTTTTTGAAACTTCCATGacttctttcactccctaatattgt-agatggtgtttttgaggcaatgttgaaaatctctgatagttgtgtgt-tttattgtggttctttgtgtgattaaattaccatgtgatcaagtgatattgaaaacccttcaggtgtggcttttagaagactttgacctatttttgcttgtgttgactctccctccagct--ttgtggaaagagggatcatgtaggttcatttctcaggcagatcagtcaccttttgccatcaaagttttagcatc--catttcca-aaatttggtgtacaagttgatatTTTGGTGTTTTTAGCTAATCTGGG-GTCAAaacagaaggccatagatgaggaagcttataaacaaatttgtttctctcagttctggagatggcaaaattcaaggtcaagtggttagcagattccatgtccggtgtgggcttgctttgtggttcatagacagccatgtttctaccatgtcctcacatgacagaagggatgagggagctctctatggtggcttcaataggggctactaatcccactcatgtgatccctgccttcatgatctaaccattccccaaggccctacctccaaatatcatcacatagggaactagatttcaacacttgaatttgagggggacaataacatttggtctatagcatcaggttacccagagccttatgcactcagaggaaatccaaaatcttctatgagtatttactggtcccctctgggtttagggaaatctttaattgcagctcttgattcagcttggtccaagcttaaattctacatttgcctg-------------tataacttgttcatgggacagagggaagtttagaggcaactgaccatttggagttttaggacaattgatggaagaggacttggcatctggatg---agaagtggagggagaatagaacaaaggtacagaaggaga--gagcac i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28739875 1560 + 96509753 CTCT--AGCCACTGGCCTCACCCCTGTAGCTGAAAGCACGGCTAAAGCAAGAGGTGGAAGAGAGGGGGTGGCCAGCACAGCTCCAGCCAGCAGCTGCCATTCTACTCTCAGTACTGGGCACTGTGGGAGGCATGGAGGCAGAGACCCGGGTATGTGGCCTGGGCTCCTCTGCCTCACTGGAGAGAGGCGTCTGTCGTTTAGCAGAgctgcggtcctgcagctgaggtgcctgctgctgctgctgccgctgGAGTTGTTTGCCTGCCTGCAAGAGACACTGGAGAGCAGGAAAAGAAGCCCAGGAGGAGGGGTTCCAGCAGCTCCTCCTGCTACCATAGGTGGCTTCT--TCCTCC-----AGGCATGGAGGTCTGTGCTGAACTGGGCTTCTGGGCTATTTGCCCCTGAGGTGCCGCTCAGGACAGGCTCTTCTTGACAGCTGGGCA-G-----------------GGGTGAGGAGGGTAGGGGGCATCTCCAAAGGGTATAGAAATCGAAGCTTTGAAACTCAGCATTTGTGCCCCAGAGTCGCCATGCCATGCCACCACCTGCCCTAGAATGTATTCAGTG------TTAGAATTACAAGTTTCTACAATGAGATTTAAATAAAGTTTGACTTTTTGAAACTT-CATATctcctttaactccctaatgttgtcagttggtgtttttgaggctatcctgaaaacctctgatctttgtgtctctttgctg-ggttgcttgtgtgatggaattaccatctaatcaactgttactggaaatctttcaggtacggcttttagaagacattggcctacttttccttgttcttact----ctctggtttattgtggaaagatggatcgtgtaggttcattcctctagcagatcaatcacattttgccagcaaagatttggcatcagagtttccagaaattatgagtacaagttgatatGTTGGTA-CTttagctaatctgggtgccaaaacagaatgacatagactaggtaccagagaaacaaatttatttctcattgttctggagaaggtaaaatccaaggtcaaatggtcagcaggttttgtgtctggtgacagtttgctttctggttcatagactgtcatctttgtactgtgtcttcacatgatagaagggataagggagctctcagcagtccctttgataggaac-actgaccccattcatatggtctctgccttcatgaatgaatcgccttgcaaagcctcacctctaaatcccatcaaatagggagttagattttaacacatgaatttga-ggggaccataaaatttggtctatagcatcaggtcaccctgagccctttgcactcacaggaaatctctaatattctttaagtatttgctggtcccctctgggtttagagaaatctttaattgcagctcttgattcagctcggtccaagcttaaattctacatttgccca-------------cataacctgttcatgagacagggggaactttagtggcaactgaccatttggagttttaggagaatccatgggggaggccttgggaattggatgagcagaagtggaggggggaaggaggaaa-gtgcagaaggatatagagcag i macFas5.chr10 C 0 C 0 s chlSab2.chrUn_KE147573v1 24176 1521 + 85383 CTGTAGAGCCACCAGCCTCCGCTCTTGAGCTGAAAGTGTGGCTGGAGCTAGAGGTGACAGAGAGGGGGTGACCAGCATAGCCCCAGCCAGCAGCTCCCTCACTGCTTCCAGTCCGGGGCTCAGTAGAAACCATGGAGGCAGAGACCAGGGTGTGCAACCTGGGCTCCTCTGCCTCACTGGAGAGAGACTTGTCTCATTCAGCAGAGCAGCAGCCCAGCTGCTGAAGGGTCTGCTGCTACTGCT---GCTGGGGGTATTTGCCTGCCTGTA---------GGAGAGCAGGAAAAGGAGTCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGCGGCCTCC--TCCTCC-----ACACATGGAGGTTTGCCCTCAGCTGGAGGTCTGGGTCATTTGCCTATAATGTGCTGCCCAGGATGGGCTCTTCTTGACAGGAGGACAGG-----------------GGGTGAGGAGGCCAGGGAGCCTCTCCAAAG------------GAAGCTTTTAAACTCAGCAGCTACACCCCAGAATC-----TCCATGCCTCCACCTGCCCAAGGATTTATCCATAGCGCAACTATGAATTTCAAGTTTCTACAATAACATTGAAATAAAGTTTGACTTTTTGAAACTTCCATGacttctttcactccctaatactgt-agatggtgtttttgaggcgatgttgaaaacctctactagttgtgggt-tttgttgtggttctttgtgtgattaaattaccatttgatcaagtgatactgaaaacccttcaggtatggcttttagaagactttgacctacttttgcttgtgttgactctccctccagct--ttttggaaagagggatcaagtaggttcatttctcaggcagatcaatcaccttttgccatcatagttttagcatc--cgtttcca-aaatttggtgtacaagttgatatGTTGGTGTttttagctaatctggg-gttaaaacagaatgccatagatgaggaagcttataaacaaatgtatttctctcagtcctgaagatg---------------aagtggtcagcagattcca-gtctggtgtgggcttgc-ttctggttcatagacagccatgtttctactatgtcctcacatgacacaaggggtgagggagttctctatggtgcctttgataagggctacttatcccactcctgtggtccctgccttcatgatctaatcatcccccaaggccctacctccaaatattatcacatagggaattagatttcaacacttgaacttgagggggacaataacatttggtttatagcatcaggtaacccagagcctggtgcactcaaaggaaatccaaaatcttctataagtatttgctggtcccctctgggcttagagaaatctttaattgcagctcttgattcagcttggtccaagcttaaattctgcatttgcctg-------------cataacttgtccatgggacagagggaagtttagatgcaactgaccattt-gagttttaggacaattgatggaggagggcttggcatctggatg---agaagtggagggagaatagagcaaaggtgcagaaagagagtgagcac i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 555952 1533 - 854822 CTGTAGATCCACCAGCCTCAGCTCTTGAGCTGAAAGTGTGGCTGGAGCTAGAGGTGACAGAGAGGGGGTGACCAGCACAGCCCCAGCCAGCAGCTCCCTCACTGCTCCCAGTCCAGGGCTCAGTGGAAACCATGGAGGCAGAAACCAGGGTGTGCAACCTGTGCTCCTCTACCTCACTGGAGAGGGACTTCACTCATTCAGCAGAGCAGCAGCCCAGCTGCTGAAGAGCCTGCTGCTACTGTT---GTTGGGGGTGTTTGCCTGCCTGCT---------GGAGAGCAGGAAAAGGAGCCTGTGAGCAGGGGTTCCAGCAGGTCCTCCTGCTCCCAGAGGCGGCCTCC--TCCTCC-----AGGCATGGAGGATTGCCCTCAGCTGGTCATCTGGGTCGTTTGCCTATAATGTGCTGCCCAGGATGGGCTCTTCTTGACAGGAGGACAGG-----------------GGGTGAGGAGGCCAGGGAGCCTCCCCAAAG------------GAAGCTTTTAAACTCAGCAGCTACACCCCAGAATC-----TCCATGCCTCCACCTGCCCAAGGATTTATCCACAG-CCAACTATGAATTTCGAGTTTCTGCAATAACACTGAAATAAAGCTTGACTTTTTGAAACTTCCATGacttctttcactccctaatactgt-agatggtgtttttgaggtgatgttgaaaacctctgctagttgtgggt-tttgttgtggttctttgtgtgattaaattaccatctgatcaagtgatattgaaaacccttcaggtatggcttttagaagactttgacctacttttgcttgtgttgactctccttccagct--ttttggaaagagggattaagtaggttcatttcttaggcagatcaatcaccttttgccatcatagttttagcatc--cgtttcca-aaatttggtgtacaagttgatatGTTGGTGTTTTTAGCTAATGTGGG-ATtaaaaccaaatgccatagatgaggaagcttataaacaaatttatttctctcagttctgaagatg---------------aagtggtcagcagattcca-gtctggtgcgggcttgc-ttctggttcatagacagccatgtttctaccatgtcctcacatgacagaagggatgagggagttctctatggtgcctttgataggggctactaatcccactcctgtggtccctgccttcgtgatctaatcatcctccaaggccccacctccaaatatcatcacatggggaattagatttcaacacttgaacttgagggggacaataacatttggtttatagcaTCAGGTTACCCAGAGCCTGGTGCACTCAGAGGAAATCCAAAATCTTCTATAAGTATTTGCTGGTCCCCTTTGGGCTTAGGGAAATCTTAAATTGCAGCTCTTGATTCAGCTTGGTCCAAGCTTAAATTCTGCATTTGCCTGAACTACATGGAAACATAACTTGTCCATGGGACAGATGGAAGTTTAGATGCAACTGACCATTT-GAGTTTTAGGACAATTGATGGAAGAGGGCTTGGCATCTGGATG---AGAAGTGGAGGGAGAATAGAACAAAGGCGCAGAAGGAGAGTGAGCAC i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=64786.000000 s hg38.chr9_KI270719v1_random 107123 23 + 176845 aatgagaaaggggaagagggaca s panTro5.chr9 41282526 23 + 116767853 aatgagaaaggggaagagggaca i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132576312 23 + 247869975 aatgagaaagggaaagagggaca i panPan2.chr2B C 0 C 0 s ponAbe2.chr9 116162606 23 - 135191526 aatgagaaaggggaagaggGACA i ponAbe2.chr9 C 0 N 0 s nomLeu3.chrUn_GL397501_2 277629 23 + 1485088 aataagaaaggggaagagggaca i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28741435 22 + 96509753 aatgtgaaagcataaga-ggacc i macFas5.chr10 C 0 C 0 s cerAty1.NW_012004463v1 566 23 - 98917 AATGAGAAAGGGGAAGAGGGACA i cerAty1.NW_012004463v1 N 0 C 0 s chlSab2.chrUn_KE147573v1 25697 23 + 85383 aatgagaaaggggaagagggaca i chlSab2.chrUn_KE147573v1 C 0 C 0 s colAng1.NW_012118199v1 557485 23 - 854822 AATGAGAAAGGGGAAGAGGGACA i colAng1.NW_012118199v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=293497.000000 s hg38.chr9_KI270719v1_random 107146 139 + 176845 tctggacataagggccaactggagggcagggaAGGTAATTTTCCTTGCATTTTAGACTCAGACCACATATCACATCAGAATCACCTGAGGGAGAC--GTTTTCAATGCATATTCCTGGGTTTCTTCTCTTGGAAATTTGTA s panTro5.chr9 41282549 139 + 116767853 tctggacataagggccaactggagggcagggaAGGTAATTTTCCTTGCATTTTAAACTCAGACCACATATcacatcagaatcacctgagggaggc--attttcaatgcatattcctgggtttcttctcttggaaattttta i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132576335 139 + 247869975 tctggacataagggccaactggagggcagggaAGGTAATTTTCCTTACATTTTAAACTCAGACCACATATCACATCAGAATCACCTGAGGGAGAC--ATTTTCCATGCATATTCCTGAGTTTCTTCTCTTGAAAATTTTTA i panPan2.chr2B C 0 I 4 s nomLeu3.chrUn_GL397501_2 277652 139 + 1485088 tccggacataagGGCCAACTGTCAGGCAGGGAAGGTAATTTTCCTTGCATTTTAAACTCAGACCACATGTCACGTCAGAATCACCTGAGGGAGAC--ATTTTCAACGCATATTCCTGGGTTTCTTCTCTTGGAAATTTTTA i nomLeu3.chrUn_GL397501_2 C 0 I 4 s macFas5.chr10 28741457 134 + 96509753 tctggatataagagtcaactggagggcaagCAAGGTAATTTTCTTTGCATTATAAACTTGGATCCCATATCACGTCAACATCACCTGAAGAATACATTTTTTCAATGCATATTCCTGGGTT-------CTGGAAATTTTGA i macFas5.chr10 C 0 I 4 s cerAty1.NW_012004463v1 589 139 - 98917 TCTGGTCATAAAGGCCAACTGGAGGTCAGGGAAGGTAATTTTCCTTGGATTTTAAACTCGGACCACATATCACATCAGAATCACCTGAGGGAGAC--CTTTTCAAAGCATATTCCTGGGTTTCTTCTCTTGGACATTTTTA i cerAty1.NW_012004463v1 C 0 I 4 s chlSab2.chrUn_KE147573v1 25720 139 + 85383 tctggtcataagggccaactggaggtcagggaAGGTAATTTTCCTTGGATTTTAAACCTGGACCACATATCACATCAGAATCACCTGAGGGAGAC--ATTTTCAAAGCATATTCCTGGGTTTCTTCTCTTGGAAATTTTTA i chlSab2.chrUn_KE147573v1 C 0 I 3305 s colAng1.NW_012118199v1 557508 139 - 854822 TCTGGTCATAAGGGCCAACTGGAGGTCAGGGAAGGTAACTTTCTTTGAATTTTAAACTCAGACCACATATCACATCAGAATCACCTGAGGGAGAT--ATTTTCAATGCATATATCTGGGTTTCTTCTCTTGGAAATTTTAT i colAng1.NW_012118199v1 C 0 I 3 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=106854.000000 s hg38.chr9_KI270719v1_random 107285 47 + 176845 TTAAATCTTGAGTTGTGCTGATTTATCCATATTTATCATAAGAATTT s panTro5.chr9 41282688 47 + 116767853 ttaaatCTTGAGTTGTGCTGATTTATCCATATTTATCATAAGAATTT i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132576478 47 + 247869975 TTAAATCTTGAGTTGTGCTGATTTATCCATATTTATCATAAGAATTT i panPan2.chr2B I 4 C 0 s nomLeu3.chrUn_GL397501_2 277795 47 + 1485088 TTAAATCTTGCGTTGTGCTGATTTATCCATATTTATCATAAGAATTT i nomLeu3.chrUn_GL397501_2 I 4 C 0 s macFas5.chr10 28741595 47 + 96509753 ATAAATCTGGAGTTATGCCAATTTATCTGTATTTATCATAAGAATTT i macFas5.chr10 I 4 C 0 s cerAty1.NW_012004463v1 732 47 - 98917 TTAAATCTTGAGTTTTGTCAATTTATCTGTATTTATCATAAGAATTT i cerAty1.NW_012004463v1 I 4 C 0 s chlSab2.chrUn_KE147573v1 29164 47 + 85383 TTAAATCTTGAGTTGTGCCAATTTATCTGTATTTATCATAAGAATTT i chlSab2.chrUn_KE147573v1 I 3305 C 0 s colAng1.NW_012118199v1 557650 47 - 854822 TTAAATCTTGAGTTGTGCCAATTTATCTGTATTTATCATAAGAATTT i colAng1.NW_012118199v1 I 3 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=30121.000000 s hg38.chr9_KI270719v1_random 107332 16 + 176845 TGGATAATTCTTactt s panTro5.chr9 41282735 16 + 116767853 TGGATAATTCTTactt i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132576525 16 + 247869975 TGGATAATTCTTactt i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 277842 16 + 1485088 TGGATAATTCTTactt i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 779 16 - 98917 TGGATAATTCTCACTT i cerAty1.NW_012004463v1 C 0 I 4 s chlSab2.chrUn_KE147573v1 29211 16 + 85383 TGGATAATTCTCACTT i chlSab2.chrUn_KE147573v1 C 0 I 4 s colAng1.NW_012118199v1 557697 16 - 854822 TGGATAATTCTTACTT i colAng1.NW_012118199v1 C 0 I 59 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e macFas5.chr10 28741642 0 + 96509753 C e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=115476.000000 s hg38.chr9_KI270719v1_random 107348 264 + 176845 tgagaggcccaggca-gtggatcacttgaggtcaggaattcaaaaccagcctggccaacatggtgaaacctcatctctactaaaaatacaaaaattagccaggcatggtggtacatgcctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaatcagggaggc--------------------agagatgacagtgagctgagatcacaccactgcactccagcctgggcaacagtaagactccatctc----aaaaaaaaaaaaaaaaaagaaTTG s panTro5.chr9 41282751 268 + 116767853 tgagaggcccaggca-gtggatcacttgaggtcaggaattcaaaaccagcctggccaacatggtgaaacctcatctctactaaaaatataaaaattagccaggcatggtggtacatgcctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaatcagggaggc--------------------agagatgacagtgagctgagatcacaccactgcactccagcctgggcaacagtaagactccatctcaaaaaaaaaaaaaaaaaaaaaagaaTTG i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132576541 227 + 247869975 tgggaggcccaggcaggtggatcacttgaggtcaggaattcaaaaccagcctggccaacgtggtgaaacctcatctctactaaaaatacaaaaattagccaggcatggtggtgcacgcctgtagtc------------------------------------------------cnnnnnnnnnnnnnnnnnnnnagagatgacagtgagctgaaatcatgccactgcactccagcctgggcaacagtgagactccatctc--------------aaaaaaaaaaaTTG i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 277858 263 + 1485088 tgggaggctcaggca-gtggatcacttgaggtcaggaattcaaaaccagcctggccaacatggtgaaacctcatctctactaaaaatacaaaaattagccaggcatggtggtgcacacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaatcagggaggc--------------------agagatgacagtgagctgagatcacgccactgcactccagcctgggcaacagtgagactccatctc-----aaaaaaaaaaaaaaaaagaaTTG i nomLeu3.chrUn_GL397501_2 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 557713 59 - 854822 I e chlSab2.chrUn_KE147573v1 29227 4 + 85383 I e cerAty1.NW_012004463v1 795 4 - 98917 I e macFas5.chr10 28741642 0 + 96509753 C e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=341919.000000 s hg38.chr9_KI270719v1_random 107612 489 + 176845 TGGATAATTCTGATGCAATTAGAAAACAAAGCAGAGCTTGACAACCACTGGGTTGGGATGTATATCAGGAAGACATTT--------GATTATGTAAAATAACTGCAAAGCAAACTGAAGGGGAAATATTTT---AAACTGCTTGAATATAATTAGATAATTCAACTCTTCCTATGTATGTAGTTTGACCACGTATTTGATGTCTGCTATACTAAGATTGGAAATGTGTAGAAG--TGTTTTTAAAAATCAGGTAGAAGCACAGAAAAAAGGAGTTGGAGAGAAAAGAAAACTAGCTATTGTCTGGTAACAAGAGAAGA-----GAAGGGAAACGAAGTAGCATA-TTTTTGTTCATTGTTTGATGGCATCTAAATTATAATCCCAAATATTTTTTT-CTAAGAAATCCAATAATACAAGTATTC---------AGAGTGGAGTACCAACACTGATTTACTGGGAAAGAGAAGTGTAATCTGTTTTGCTGCATAATGTtgag-------ggagaaggaaaggaaaa s panTro5.chr9 41283019 490 + 116767853 TGGATAATTCTGATGCAATTAGAAAACAAAGCAGAGCTTGACAACCACTGGGTTGGGACGTATATCAGGAAGACATTT--------GATTATGTAAAATAACTGCAAAACAAACTGAAGGGGAATTATTTT---AAAATGCTTGAATATAATTATATAATTCAACTCTTCCTATGTATGTAGTTTGACCACATATTTGATGTCTGCTATACTAAGATTGGAAATGTGTAGAAG-TTTTTTTTAAAAATCAGGTAGAAGCAGAG-AACAAGGAGTTGGAGAGAAAAGAAAACTAGCTATTGTCTGGTAACAAGAGAAGA-----GAAGGGAAACGAAGTAGCATA-TTTTTGTTCATTGTTTGATGGCATCTCAATTATGATCCCAAATATTTTTTTCCTAAGAAATCCAATAATACAAGTATTC---------AGAGTGGAGTACCAACACTGATTTACTGGGAAAGAGAAGTGTACTCTGTTTCGCTGCATAATGTtgag-------ggagagggaaaggaaaa i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132576768 485 + 247869975 TGGGTAATTCTGATGCAGTTAGAAAACAAAGCAGAGCTTGACAACCACTGGGTTGGGACGTATATCAAGAAGACATTT--------GATTGTGTAAAATAACTGCAAAACAGACTGAAGGGGAACTATTTT---AAAATGCTTGAATATAATTATATAATTCAACTCTTCCTATGTACGTAGTTTGACCACATATTTGATGTCTGCTGTACTAAGATTGGAAATGCGTAG-----TTTTTCTAAAAATCAGGTAGAAGCACAGAAAAAAGAAGTTGGAGAGAAAAGAAAACTAGCTGTTGTCTGGTA--AGGAGAAGA-----GAAGGGAAACGAAGTAGCATA-TTTTTGTTCATCGTTTGATGGCATCTAAATTATGATCCCAAATATTTTTTTTCTAAGAAATCCAATAATACAAGTATTC---------GGAGTGGAGTACCAACACTGATTTACTGGGAAAGAGAAGTGTATTCTGTTTTGCTGCATAATGTtgag-------ggagaaggaaaggaaaa i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 278121 499 + 1485088 TGGATAATTCTGATGCAATTAGAAAACAAAGCAGAGCTGGAAAACCACTGGGTTGGGACATATATCAGGAAGACATATATCAGGAAGATTATGTAAAATAACTGCAAAACCAACTGAAGGGGAGTTATTTT---AAAATGCTTGAATATAATTATATAATTCAACTCTTCCTATGTACGTAGTTTGACCACATATTTGATGTCTGCTATACTAAGATTGGAAATGTGTAGAAGTTTTTTTTTAAAAATGAGGTAGAAGCACAGAAAAAAGGAGTTGGAGAGAAAAGAAAACTAGCTATTGTCTGGTGACAAGAGAAGA-----GAAGGGAAACGAAGTAGCATA-TTTTTGTTCATGGTTTGATGGCATCTAAATTATGATCCCAAATTTTTTTTT-CTAAGAAATCCAATAATACAAGTATTC---------AGAGAAGAGTACCAACACTGATTTACTGGGAAAGAAAAGTGTACTCTGTTTTGCTGCATAATGTtgag-------ggagaaggaaaggaaaa i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28741642 499 + 96509753 TGGAGAATTCTGAGGAAATTAGACAACAAAGTGGAGCTTGACAACCACTGGTTTAGAATGTATATCTGGAAGACGTTT--------GATTATATAAAATAATCACATAA--AACTGAGGAGGAATTGTTTTTTAAAAGTGCTTG--------CATATAATTCAACTATTCCTGCATATGAAGTTTGACCACACATTTGGTCTCTACAATACTAAGGTTGGGAACGTGCAGATT--ATCTTTCAAAAATCAGGTAA----ACAGAGGAAAGGAGTTGGAGAGAAAAGACAATTGACAAATGTCTGGTAagaagagaagagaagtgaaggggaaggaagTAGCATATTTTTTGTACATTATTCAATGTCATCTAAATTATAAGCTCAAACGGTGTTT--ATAAGAAAGCCAATAATACAAGTTTTCAGAGTGTAGAGAGTGTAGTGCCAACACTGATTTGCTGGGAATGAGAAGTGTACTCTGTCTTGCTGTGTATTGTTGAACAGGCTCaaaaaaaaaaaaaaaaa i macFas5.chr10 C 0 I 1583 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 557713 59 - 854822 I e chlSab2.chrUn_KE147573v1 29227 4 + 85383 I e cerAty1.NW_012004463v1 795 4 - 98917 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=265545.000000 s hg38.chr9_KI270719v1_random 108101 505 + 176845 ttagttgagtaaacaagtaagagactggtcctcagggaagctgtctgcctgaaaaatcacaactactgcacctacagataagccctgaacagataagcatgcagggtccagcaccgatgccttctgttctttgtgtaattggcaagctcccaggtaaaattttcctccccttttcaggcatatacatggcggcctctgtgggaacttgcacagggaggaggggggcttacctaaaacaaacccacagttatacaaacaggagaagcccactttgtgcttgactagagacatacccacagctggatatataaagggaattgtgcagacagttttatatatagctgagaggagtttcttataaaagctttttgattcaactgtaaaaacggcaatccacttggacgcccttgtctgctgcagagagcttcctccttttgcttattaaactttcactcccacctcacccgtgtgtccccgttccttaatcatcttggtggtgagatga s panTro5.chr9 41283509 505 + 116767853 ttagttgagtaaacaagtaagagactggtcctcagggaagctgtctgcctgaaaaatcacaactactgcacctacagataagccctgaacagataagcatgcagggtccagcacagatgccttctgttctttgtgtaattggcaagctcccaggtaaaattttcctccctttttcaggcatatacatggcggcctctgtgggaacttgcgcagggaggaggggggcttacctaaaacaaacccacagttatacaaacaagagaagcccactttgtgcttgactagagacatacccatagctggatatataaagggaattgtgccgacagttttatgtatagctgagaggagtttcttataaaagctttttgattcaactgtaaaaacggcaatccacttggatgcccttgtctgctgcagagagcttcctccttttgcttattaaactttcactcccacctcacccttgtgtccccgtcccttaatcatcttggtggtgagatga i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132577253 505 + 247869975 ttagttgagtaaacaagaaagagactggtcctcagggaagctgtctgcctgaaaaatcacaactactgcacctacagataagtcctgaacagataagcatgcaaggtccagcacacatgccttctgttatttgtgtaattggcaagctcccaggtaaaattttcctccctttttcaggcatatacatggcggcctctgtgggaacttgcacagggaggagggtggcttacctaaaacaaacccacagttatacaaacaagagaagcccactttgtgcttgactaaacacatacccacagctggatatataaagggaattgtgcagacagttttatatagagctgagaggagtttcttataaaagctttttgattcaactgtaaaaacggcaatccacttggatgcccttgtctgctgcagagagcttcctccttttgcttattaaactttcactccaacctcacccatgtgtccctgttccttaatcatcttggtggtgagatga i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 278620 504 + 1485088 ttagttgagtaaacaagaaaaagactggtcctcagggaagctgtctgcctgaaaaatcacaactactgcacctagagataagcccggcacagataagcatgcagggtccagcacagacgccttctgttctttgtgtaattcgcaagctcccaggaaaaattttcctccgtttttcgggcatatacatggtggcctctgtgggaacttgcacagggaggaggg-ggcttacctaaaacaaacccacagttatacaaacaagagaagcccactttgtgcttgactagagacatacccacagctggatatctaaagggaattgtgcagacagttttatacatagctgagcggagtttcttataaaaggtttttgattcaactgtaaaaatggcaatccacttggacccccttgtctgctgcagagagcttcctccttttgcttattaaactttcactccaacctcacccgtgtgtccctgttccttaatcatcttggcggtgaggtga i nomLeu3.chrUn_GL397501_2 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 557713 59 - 854822 I e chlSab2.chrUn_KE147573v1 29227 4 + 85383 I e cerAty1.NW_012004463v1 795 4 - 98917 I e macFas5.chr10 28742141 1583 + 96509753 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=53450.000000 s hg38.chr9_KI270719v1_random 108606 44 + 176845 agaactcaaggtgatacctcacaagagagactgctacattgtgt s panTro5.chr9 41284014 44 + 116767853 agaactccaggtgatacctcacaagagagactgctacattgtgg i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132577758 44 + 247869975 agaaccccacgtgatacctcacaagagagactgctacattgtgg i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 279124 44 + 1485088 agaactctaggcgatacctcacaagagagatggctacattgtgg i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 799 44 - 98917 agaactccaggtgatacctcacaagagagactgctacaccgtga i cerAty1.NW_012004463v1 I 4 C 0 s chlSab2.chrUn_KE147573v1 29231 44 + 85383 agaactccaggtgatacctcacaagagagactgctacaccgtga i chlSab2.chrUn_KE147573v1 I 4 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 557713 59 - 854822 I e macFas5.chr10 28742141 1583 + 96509753 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=41604.000000 s hg38.chr9_KI270719v1_random 108650 23 + 176845 tgcattggtgagactgcaacTTT s panTro5.chr9 41284058 23 + 116767853 tgcattggcgagactgcaacTTT i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132577802 23 + 247869975 tgcattggtgagactgcaacTTT i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 279168 23 + 1485088 tgcattggtgagactgcaacTTT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 843 23 - 98917 tgcattggcaagactGCAACTTT i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 29275 23 + 85383 tgcatgggcaagactGCAACTTT i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 4 23 + 48813 TGCATTGGCAAGACTGCAACTTT i manLeu1.NW_012101734v1 N 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 557713 59 - 854822 I e macFas5.chr10 28742141 1583 + 96509753 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=21336.000000 s hg38.chr9_KI270719v1_random 108673 9 + 176845 AAGAAGTGT s panTro5.chr9 41284081 9 + 116767853 AAGAAGTGT i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132577825 9 + 247869975 AAGAAGTGT i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 279191 9 + 1485088 AAGAAGGGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28743724 9 + 96509753 AAGAAGTAT i macFas5.chr10 I 1583 C 0 s cerAty1.NW_012004463v1 866 9 - 98917 AAGAAGTGT i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 29298 9 + 85383 AAGAAGTGT i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 27 9 + 48813 AAGAAGTGT i manLeu1.NW_012101734v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e colAng1.NW_012118199v1 557713 59 - 854822 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=651156.000000 s hg38.chr9_KI270719v1_random 108682 231 + 176845 GACTTTTATTGCTGCTGAATTATTTTATCTCCTACCCAGTTGAAAAT--AAAGGATATAAAGTGCTTAGGTTGAACACAAAGTCCTCTGCTCTAGGTAACATCTTCAGCAGCCACATTAGCAGAGGCATGGGTGGTAATGGTGGAATAGATGTCTCTTTGCTTCTGACAGGGTGTCTGCTTATGTGTTAAACAAAATAGTATGGTATATATTTCATTAAGAAATCTGCTAAAA s panTro5.chr9 41284090 231 + 116767853 GACTTTTATTGTTGCTGAATTATTTTATCTCCTACCCAATTGAAAAT--AAAGGATATAAAGTGCTTAGGTTGGACACAAAGTCCTCTGCTCTAGGTAACATCTTCAGCAGCCACATTAGCAGAGGCATGGGTGGTAATGGTGGAGTAGATGTCTCTTTGCTTCTGACAGGGTGTCTGCTTATGTGTTAAACAAAATAGTATGGTATATATTTCATTAAGAAATCTGCTAAAG i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132577834 230 + 247869975 GACTTTTATTGCTGCTGAATTATTTTATCTCCTACCCAATTGAAAAT--AAAGGATATAAAGTGCTTAGGCTGAACACAAAGTCCTCTGCTCTAGGTAACATCTTCAGCAGCCACATTAGCAGAGGGATTGGTGGTAATGGTGGAGTAGATGTCTC-TTGCTTCTGACAGGGTGTCTGCTTATGTGTTAAACAAAATAGTATGCTATATATTTCATTAAGAAATCTGCTAAAA i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 279200 231 + 1485088 GACTTTTATTGCCGCTGAATTATTTTATCTCCTACCCAATTGAAAAT--AAAGGATATAAAGTGCTTAGGCTGAACACAAAGTCTTCTGCTCTAGGTAACATCTTCAGCAGCCACATTAGCAGAGGGATGAGTGGTAATGGTGGAGTAGATGTCTCTTTGCTTCTGACAGGGTGTCTGCTTATGTGTTAAACAAAATAGTATGGTATATATTTCATTAAGAAATCTGCTAAAA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28743733 213 + 96509753 GTGTTTTATTGGTGCTGAATTATTTTATCTCATACCTAGTTGAAAGTGAAAGGGCTATAAAGTGCTTAGGTTGAACACAAAGTCCTCTGCTATCAGTAACATCTTCAGGAGCTGTATTAGAGGAGGGATGGGTGGCAGTCGTGTAGTGGATGGCTCTTC------------------GCTTATGTGTTAAACCAAATAGTATGGTATATATTTTATTAAGAAATCTGTT--AA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012004463v1 875 231 - 98917 GACTTCTATTGCTGCTGCATTATTTTATCTCACACCCAGTTGAAAGT--AAAGGATATAAAGTGCTTAGGTTGAACACAAAGTCCTCTGCCATAGGGAACATCTTCAGCAGCCACATTAGCAGAGGGATGGGTGCTAATGGTGGAGTAGATGGCTCTTCGCTTCTGACAGGATGTCTGCTTATGTGTTAAACAAAATAGCACGGTATATATTTCATTAAGAAATCTGCTAAAA i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 29307 231 + 85383 GACTTTTATTGCTGCTGAATTATTTTATCTCATACCCAATTGAAAGT--AAAGGCTATAAAGTGCTTAGGTTGAACACAAAGTCCTCTGCCATAGGGAACACCTTCAGCAGCCACACTAGCAGAGGGATGGGTGCTAATGGTGGAGTGGGTGGCTCTTCGCTTCTGACAGGGTGTCTGCTTATGTGTTAAACAAAATAGCACGGTATATATTTCATTAAGAAATCTGCTAAAA i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 36 231 + 48813 GACTTTTATTGCTGCTGAATTATTTTATCTCACACCCAATTGAAAGT--AAAGGATATAAAGTGCTTAGGTTGAACACAAAGTCCTCAGCCATAGGGAACATCTTCAGCAGCCACACTAGCAGAGGGATGGGTGGTAATGGTGGAGTAGATGGCTCTTCGCTTCTGACAGGGTGTCTGCTTATGTGTTAAACAAAATAGCACGGTATATATTTCATTAAGAAATCTGCTAAAA i manLeu1.NW_012101734v1 C 0 C 0 s colAng1.NW_012118199v1 557772 231 - 854822 gactCTTATTGCTGCTGAATTGTTTTATCTCATACCCAATTGAAAGT--AAAGGATACAAAGTGCTTAGGTTGAACAGAAAGTCCTCTGCCATAGGGAACATCTTCAGCAGCCACACTAGCAGAGGGATGGGTGGTAATGGTGGAGTGGATGGCTCTTCACTTCTGACAGGGTGTCTGCTTATGTGTTAAACAAAATAGCACGGTGTATATTTCATTAAGAAATCTGCTAAAA i colAng1.NW_012118199v1 I 59 N 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=784564.000000 s hg38.chr9_KI270719v1_random 108913 384 + 176845 AA-TGAAGTAAAA--GAGGTTCATGTTCTTAAGAGGCACAGGATTTGCTACGGCAGCAAGACCAAAAGGCTTAAGTAACAAAAATGTGCATAGTAGTTACAAACATTTTCATCTAAACAAAACAATGTGAGCATCTGCATATGACAATAACTC--ATGC-AAAAATA-TTTTTAACTGAGATTGAAATCATTTTATACATAAC--GTGTTATCACTGTATTCTCAGGTAATATATTGTTTGTATATAGATGTTATAAATAATAACTTATTTAAGTTATTCAtcatttatacaacaaataattctttggaatctacaaaatgctggttttgttctagtcactgaatgtacaAA-----T----TGATTTAAAATATGTGTTCTTA--GAGTGTGGTAGATTAAAA s panTro5.chr9 41284321 388 + 116767853 AA-TGAAGTAAAA--CAGGTTCGTGTTCTTAAGAGGCACAGGATTTGCTATGGCAGCACGACCAAAAGACTTAAGTAACAAAAATGTGCATAGTAGTTACAAACATTTTCATCTAAACAAAGCAATGTGAGCATCTGTATATGACAATAACTC--ATGCAAAAAATATTTTTTAACTGAGATTGCAATCATTTTATACATAACAAATATTATCACTGTATTCTTAGGTAATATATTGTTTTTACATAAATGTTATAAATAATAACTTATTTAAGTTATTCAtcatttatacaacaaataattctttggaatctacaaaatgctggttttgttctaggcacagaatgtacaAA-----T----TGATTTAAAATATGTGTTCTTA--GAGTGTGGTAGATTAAAA i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132578064 383 + 247869975 AAGTGAAGTAAAA--CAGGTTCATGTTCTTAAGAGGCACAGTATTTGCTACGGCAGCAAGACCAAAAGGCTTAAGTAGCAAAAATGTGCATAGTAGTTACAAACATTTTCATATAAA-GAAACAATGTGAGCATCTGTATATGACAATAACTC--ATGCAAAAAATATTTTTTAACTGAAATTGAAATC-----ATACATAACAAATGTTATCACTGTATTCTGAGGTAATATATTGTTTGTATATAGATGTTATAAATAATAACTTGTTTAAGTTATTCAtcacttatacaacaaataattctttggaatctacaaaatgctggttttgttctaggcactgaatgtacaAA-----T----TGATTTAAAATATGTGTTCTTA--GAGTGTGGTAGATTAAAA i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 279431 388 + 1485088 AA-TGCAGTAAAA--CAGGTTCATGTTCTTAAGAGGCACAGTATTTGCTACGGCAGCAAGACCAAAAGGCTTAAGTAACAAAAATGTGCATAGTAGTTACAAACATGTTCATATAAACAAAACAATGTGAGCATCTGTATATGACAATAACTC--ATGCAAAAAACATTTTTTAACTGAGATTGAAATCATTTTATACGTAACAAATGTTATCACTGTATTCTGAGGTAATATATTGTTTGTATATAGATGTTATAAATAATAACTTATTTAAGTTATTCAtcatttatacaacaaataattcttaggaatctacaaaatgctggttttgttctaggcactgaatgtacaAA-----T----TGATTTAAAATATTTGTTCTTA--GAGTGTGGTAGATTAAAA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28743946 379 + 96509753 AA-TGAAGTAAAACTCAGGTACCTGTTCTTAAAGGGCACCCTATTTGCTGTGGCAGCAAGAACAAAAGGCTTAAGTACCAAAAATGTACGT--TAACTACAAACATTTTCATATAAACAAAACAATGTGAGCATCTATATATGACAGTAACACCTACGCCCAAAATA-TTTTTAACTGAGATTGAAATCATTTTCTACATAACAAATGTTATCACTGTATTCTGAGATCATATATTATTTGTGTATAGACACTATAAATATTAACTTATTTAAGTTATTCATTATATCTTCAACAAA----TCTCTGGAATCTACAAAATGCTGGTTTC------GGCACTGAACGTAGAAT-----TGAGATAAAATATAATACTTTTTCTTA------GTGGTTGATTAAAA i macFas5.chr10 C 0 I 5 s cerAty1.NW_012004463v1 1106 382 - 98917 AA-TGAAATAAAA--TAGGTTCATGCTCTTAAGAGGCACAGTATTTGCTATGGCAGCAAGACCAAAAGGCTTAGGTATCAAAAATGTGCATAGTAGTTACAAACATTTTTGCATAAATAAAACAATGT----ATCTACATATGAAAATAACTC--ATGCAAAAAATA-TTTTTAACTGAGATTGAAATCATTTTATACACAACAAATGTTATCACTGTATTTTGAGGTAATATATTGTTTGTATATAGATGTTACAGGTAAT-ACTTATTTAAGTTATTCAtcatttatacaacaaataattctttggaatctacaaaatgctggttttgttctaggcactgaatgtacaAA-----T----TAAAATATAATATTTGTTCTTA--GAGTGTGGTAGATTAAAA i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 29538 386 + 85383 CA-TGAAATAAAA--TAAGTTCATGTTCTTAAGAGGCACAGTATTTGCTACGGCAGCAAGACCAAAAGGATTAAGTATCAAAAATGTGCATAGTAGTTACAAACATTTTTGCATAAATAAAACAATGT----ATCTACATATGACAATAACTC--ATGCAAAAAATA-TTTTTAACTGAGACTGAAATCATTTTATACATAACAAGTGTTATCACTGTATTTTGAGGTAATATATTGTTTGTATATAGATATTATAAATAAT-ACTTATTTAAGTTATTCAtcatttatacaacaaataattctttggaatctacaaaatgctggttctgttctaggcactgaatgtacaAATTGATT----TAAAATATAATATTTGTTCTT---GAGTGTGGTAGATTAAAA i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 267 384 + 48813 AA-TGAAATAAAA--TAGGTTCATGCTCTTAAGAGGCACAGTATTTGCTATGGCAGCAAGACCAAAAGGCTTAAGTATCAAAAATGTGCATAGTAGTTACAAACATTTTTGCATAAATAAAACAATGT----ATCTACATATGAAAATAACTC--ATGCAAAAAATA-TTTTTAACTGAGATTGAAATCATTTTATACACAACAAATGTTATCACTGTATTTTGAGGTAATATATTGTTTGTATATAGATGTTACAAGTAAT-ACTTATTTAAGTTATTCAtcatttatacaacaaataattctttggaatctacaaaatgctggttttgttctaggcactgaatgtacaAA-----T----TAAAATATAATATTTGTTCTTAGAGAGTGTGGTAGATTAAAA i manLeu1.NW_012101734v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=521170.000000 s hg38.chr9_KI270719v1_random 109297 300 + 176845 AATACAAAATAggccgggcacagtggctcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaattagccaagggtggtggcacaagcctgtagtcacagctactcgggaggcagaggcaggacaatcgcttgaacctgagaggtggagatggcagtgagccgagattgcaccattgcactccaacctgggcaacaagagcaaaattctgcctAatatata s panTro5.chr9 41284709 299 + 116767853 AATAC-AAATAggccgggcacagtggctcacagctgtaatcccagcactttgggagtccaaggtaggtggatcacctgaggtcaggagttcgagaccagtctgaccaacatggtgaaaccccatctctactaaaaatacaaaattagctgagggtggtggcacaagcctgtagtcccagctactcgggaggcagaggcaggacaatcgcttgaacccaggaggtggaggtggcagtgagccgagattgcaccattgcactccagcctgggcaacaagagcaaaactctgcctaatatata i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132578447 300 + 247869975 AATACAAAATAggccgggcacagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaggagttcgagaccagcctcaccaacatggtgaaaccccatctctacgaaaaatacaaaattagccgagggtggtggcacatgcctgtagtcccagctactcggaaggcagaagcaggacaatcacttgaatccgggaggtggaggtggcagtgagccgagattgaaccattgcactccagcctaggcaacaagagcaaaactctgtctAatatcta i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 279819 300 + 1485088 AATACAAAATAggccgggcacagtggctcatgactgtaattccagcactttgggaggctgaggcaggtggatcacctaaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctactataaatacaaaattagccgaaggtggtggcacatgcctgtaatcccagctactccggaggcagagagaggacaatcgcttgtacctgggaggtggatgtggcatcgaaccgagactgcaccattgcactccaccctggccaacaagagcaaaactctgtctAatatata i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 1488 300 - 98917 AATACAAAATAggccgggcacagtgactcacacctgtcatcccagcactttgggaggctgagacaggtggattatctgaggtcaggagttcgagatcagcctgaccaacatggtgaaaacccatctctactaaaaatacaaaattagccaagggtggtgacacatgcctgtaatcccagctactctggaggcagagacaggacaatcgcttgaaaccaggaggtggaggtggcagtgagccgagattgcaccaatgcactccagcctgggcaacaagagtgaaactctgtctAATATATA i cerAty1.NW_012004463v1 C 0 I 31 s chlSab2.chrUn_KE147573v1 29924 300 + 85383 AATACAAAATAggccgggcacagtgactcacacctgtcatcccagcactttgagaggctgagacaggtggattacctgaggtcaggggttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaattagccaagggtggtgacacatgcctgtaatcccagctactctggaggcagaggcaggacaatcgcttgaaaccaggaggtggaggtggcaatgagccgagattgcaccattgcactccagcctgggcaataagagtgaaactctgtctAATATATA i chlSab2.chrUn_KE147573v1 C 0 I 31 s manLeu1.NW_012101734v1 651 300 + 48813 AATACAAAATAggccgggcacagtgactcacacctgtcatcccagcactttgggaggctgagacaggtggattatctgaggtcaggagttcgagatcagcctgaccaacatggtgaaaacccatctctactaaaaatacaaaattagccggggatggtgacacatgcctgtaatcccagctactctggaggcagaggcaggacaatcgcttgaaaccaggaggtggaggtgacagtgagccgagattgcaccaatgcactccagcctgggcaacaagagtgaaactctgtctAATATATA i manLeu1.NW_012101734v1 C 0 I 31 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e macFas5.chr10 28744325 5 + 96509753 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=3803.000000 s hg38.chr9_KI270719v1_random 109597 17 + 176845 tacatatattgtgtata s panTro5.chr9 41285008 17 + 116767853 tacatgtattatgtata i panTro5.chr9 C 0 I 549 s panPan2.chr2B 132578747 17 + 247869975 tacatacattttgtata i panPan2.chr2B C 0 C 0 s nomLeu3.chrUn_GL397501_2 280119 16 + 1485088 tacgtat-ttaccttca i nomLeu3.chrUn_GL397501_2 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e macFas5.chr10 28744325 5 + 96509753 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I a score=959.000000 s hg38.chr9_KI270719v1_random 109614 17 + 176845 tacacacatatgcatat--- s panPan2.chr2B 132578764 17 + 247869975 tatacatatatacatat--- i panPan2.chr2B C 0 I 609 s nomLeu3.chrUn_GL397501_2 280135 16 + 1485088 ----tatatgtaaataccat i nomLeu3.chrUn_GL397501_2 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e macFas5.chr10 28744325 5 + 96509753 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I e panTro5.chr9 41285025 549 + 116767853 I a score=2150.000000 s hg38.chr9_KI270719v1_random 109631 122 + 176845 attgtgtatatacacacatatgcatatatggtgtatatacacacatatgcatatatggtgtatatacacacatatgcatatatggtgtatatacacacatgcatatatggtgtatatacaca s nomLeu3.chrUn_GL397501_2 280151 83 + 1485088 attatgc---tatatacatatg-----actgtgtatatatacatatatacata--------atatatatacatatgtgtcta------atata-----------------tgtacatataaa i nomLeu3.chrUn_GL397501_2 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132578781 609 + 247869975 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e macFas5.chr10 28744325 5 + 96509753 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I e panTro5.chr9 41285025 549 + 116767853 I a score=8198.000000 s hg38.chr9_KI270719v1_random 109753 44 + 176845 atatatgcatatatgtgtatatacacacatat-gcatatatgtgt s ponAbe2.chr9 115769320 44 - 135191526 atacatgtatatgtgtgtatatatacatatat-gtatatgtgtgt i ponAbe2.chr9 N 0 C 0 s nomLeu3.chrUn_GL397501_2 280234 45 + 1485088 atatatctgtatatgtgtatatatatacacatggtgtatatgtgt i nomLeu3.chrUn_GL397501_2 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132578781 609 + 247869975 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e macFas5.chr10 28744325 5 + 96509753 I e gorGor5.CYUI01000801v1 79185 277 + 95358 I e panTro5.chr9 41285025 549 + 116767853 I a score=2426.000000 s hg38.chr9_KI270719v1_random 109797 43 + 176845 atatacacagatatgcatatattgtgtatatacacagatatgc s ponAbe2.chr9 115769364 42 - 135191526 atatatacatatatgtatatgt-gtgtatatatacatatatgt i ponAbe2.chr9 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132578781 609 + 247869975 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e macFas5.chr10 28744325 5 + 96509753 I e nomLeu3.chrUn_GL397501_2 280279 0 + 1485088 C e gorGor5.CYUI01000801v1 79185 277 + 95358 I e panTro5.chr9 41285025 549 + 116767853 I a score=31596.000000 s hg38.chr9_KI270719v1_random 109840 188 + 176845 --atgtgtgtatatacaccatatatgcatatgtgtgtatat--acatatatgcatatgtgtgtatatattacatatatgcatatgtgtgtatatat-tacatatatacgtgtgtgtatat----tacatataggcatgtgtgtatatat-tacatatatacgtgtgtgtatgtatattacatatatacatgtgtatgt s gorGor5.CYUI01000801v1 79462 187 + 95358 --atgtgtgtatatatcacatatatacgtgtgtgtgtatat---cacatatatacgtgtgtgtatatatcacatatatacgt--gtgtgtatatat-cacatatatacgtgtgtgtatatatcacatatatacgtgtgtgtgtatatat-cacatatatacgtgtgtgtat--atatcacatatatacgtgtgtatat i gorGor5.CYUI01000801v1 I 277 C 0 s ponAbe2.chr9 115769406 192 - 135191526 atatgtgtgtatatat-acatatatgtatatgtgtgtatatatacatatatgtatatgtgtgtatatat-acatatatgtatatgtgtgtatatatacatatatgtatatgtgtgtatatata-catatatgtatatgtgtgtatatatacatatatgtatatgtgtgtat--atat-acatatatgtatatgtgtgt i ponAbe2.chr9 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132578781 609 + 247869975 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e macFas5.chr10 28744325 5 + 96509753 I e nomLeu3.chrUn_GL397501_2 280279 0 + 1485088 C e panTro5.chr9 41285025 549 + 116767853 I a score=26832.000000 s hg38.chr9_KI270719v1_random 110028 74 + 176845 atatacatatatacataatatataatgtatgcatatgtataatatacatatatatctgtccaatatatatacat s panTro5.chr9 41285574 74 + 116767853 atatacatatatacataatatataatatatgcatatgtataatatgcatatatatctgtctaatatatatacat i panTro5.chr9 I 549 C 0 s gorGor5.CYUI01000801v1 79649 73 + 95358 at-cacatatatacataatatataatatatgcatatgtataatatacatatatatctgtctaatatatatacat i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 115769598 66 - 135191526 atatatacatatatgt-atatgtattatacacat-------atatacatatatatgtatataatatatgtatat i ponAbe2.chr9 C 0 I 1606 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132578781 609 + 247869975 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e macFas5.chr10 28744325 5 + 96509753 I e nomLeu3.chrUn_GL397501_2 280279 0 + 1485088 C a score=631.000000 s hg38.chr9_KI270719v1_random 110102 15 + 176845 aaatacatatattaa s panTro5.chr9 41285648 7 + 116767853 a--------tattaa i panTro5.chr9 C 0 C 0 s gorGor5.CYUI01000801v1 79722 7 + 95358 a--------tattaa i gorGor5.CYUI01000801v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e panPan2.chr2B 132578781 609 + 247869975 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e macFas5.chr10 28744325 5 + 96509753 I e nomLeu3.chrUn_GL397501_2 280279 0 + 1485088 C a score=2184.000000 s hg38.chr9_KI270719v1_random 110117 4 + 176845 atat s panTro5.chr9 41285655 4 + 116767853 atat i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132579390 4 + 247869975 atat i panPan2.chr2B I 609 C 0 s gorGor5.CYUI01000801v1 79729 4 + 95358 atat i gorGor5.CYUI01000801v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e macFas5.chr10 28744325 5 + 96509753 I e nomLeu3.chrUn_GL397501_2 280279 0 + 1485088 C a score=3292.000000 s hg38.chr9_KI270719v1_random 110121 6 + 176845 atatac s panTro5.chr9 41285659 6 + 116767853 atatac i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132579394 6 + 247869975 acatat i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 79733 6 + 95358 atatac i gorGor5.CYUI01000801v1 C 0 C 0 s macFas5.chr10 28744330 6 + 96509753 ATATGG i macFas5.chr10 I 5 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I e nomLeu3.chrUn_GL397501_2 280279 0 + 1485088 C a score=40403.000000 s hg38.chr9_KI270719v1_random 110127 46 + 176845 acatatatatTGGAAGTTGTACTGCTGAAAACAAGAG---------CTACCAACA s panTro5.chr9 41285665 46 + 116767853 acatatatatTAGAAGTTGTACTGCTGAAAACAAGAA---------CTACCAATA i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132579400 46 + 247869975 acacatatatTAGAGGTTGTACTGCTGAAAACAAGAG---------CTATTAATA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 79739 46 + 95358 acgtatatatTAGAAGTTGTACTGCTGAAAACAAGAG---------CTACCAATA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 280279 46 + 1485088 acatatatatTAGAGGTGGTATTGATGAAAACAAGAA---------GTAGTAATA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28744336 55 + 96509753 ATATATTAGATAGAGTTTGTACTATCGAAAACAAGCAGAGACTGGCTTGCTAATA i macFas5.chr10 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 951 31 + 48813 I e chlSab2.chrUn_KE147573v1 30224 31 + 85383 I e cerAty1.NW_012004463v1 1788 31 - 98917 I a score=737711.000000 s hg38.chr9_KI270719v1_random 110173 262 + 176845 AAAAAATTTCAGGAAACCTAGTGTGATTATTTTTAATAGAAATCAATATTTTAATACAGGTCTCTTGTtttttcttgtggaaataaatgacaagatggaatttctgggtgtttggtgtctgaatatttaagtatagcaggtatggtcagtttttcaaagaca-ttttaccatcttacttgtccatcggcaactc-ataaga---tatgtggaacaacgtcctctccaacaacctctagtatcagtctttgtaaagtttgtcaattaa s panTro5.chr9 41285711 262 + 116767853 AAAAAATTTCAGGAAACCTAGTGTGATTATTTTTAATAGAAATGGATATTTTAATACAGGTCTCTTGTtttttcttgtggaaataaatgacaagatggaatttctgggtgtttggtatctgaatatttaagtatagcaggtatggtcagtttttcaaaggca-ttttaccatcttacttgtccattggtaactc-ataaga---tatgtggaacaacatcctctccaacaacctctagtatcagtctttgtaaagttcgtcaattaa i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132579446 265 + 247869975 AAAAAATTTCAGGAAACGTAGTGTGATTATTTTTAATAGAAGtggatattttaatacaggtctcttgttttttcttgtggaaataaatgacaagatggaatttctgggtgtttggtatctgaacatttaagtatagcaggtatggtcagtttttcaaaggca-ttttagcatcttacttgtccatcggcaactc-ataagatattatgtggaacaacgtcctctccaacaacctccagtatcagtctttgtaaagtttgccaattaa i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 79785 262 + 95358 AAAAAATTTCAGGAAACCTAGTGTGATTATTTTTAATAGAAatggatattttaatacaggtctcttgttttttcttgtggaaataaatgacaagatggaatttctgggtgtttggtatctgaatatttaagtatagcagctatggtcagtttttcaaaggca-ttttaccatcttacttgtccattggcaactc-ataaga---tatgtggaacaacgtcctctccaacaacctctagtatcagtctttgtaaactttgtcaattaa i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 280325 264 + 1485088 AAAAAGTGTCAGGAAACGTAGTGTGATTATTTTTAATAGAAatggatatttt-atacaggtctc-tgttttttcttgtggaaataaatgacaagatggaatttccgggtgtttggtacctgaatatttaagtatagcaggtatggtcagtttttcaaaggcatttttaccatcttacttgtccatcagcaactc-ataagatattatgtggagcaacatcctctccaacaacctctagtatcagtctttgtaaagtttgtcaattaa i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28744391 263 + 96509753 -AAAATAATCAGGAAACCCGGTGTGATTATTTTCAATAATAATAAATATTTTAATACAAGACTCTTGATTTTTCTCAT-AAAATATATTACAATAtggaatttctg-gtgtctggtatctgaaaatttaagtacaacgggaatggtgagttttccagagaca-ttttaccagcttccttgctcatcggtaactcaataagatattacgtggaaccacatcctctccagcaacctctagtgtcagtctttgtagagtgtgtccattaa i macFas5.chr10 C 0 C 0 s cerAty1.NW_012004463v1 1819 265 - 98917 AAAAAACTTCAGGAAACCTAGTGTGATTATTTTTAATAGAAatggatattttaatacaggtctcttgttttttcttgtggaaataaatgacaagacggaatttctgagtgtttggtatctgaatatttcagcagagcaggtatgatcagtttttcagagaca-ttttaccatcttacttgcccattggcaactc-ataagatattatgtggaacaacatcctctccaacaacctctactagcagtctttgtaaagtttgtcaatcaa i cerAty1.NW_012004463v1 I 31 C 0 s chlSab2.chrUn_KE147573v1 30255 265 + 85383 AAAAAACTTCAGGAAACCTAGTGTGATTATTTTTAACAGAAATGGATATTTTAATACAGGTCTCTTGCtttttcttgtggaaataaatgacaagacggaatttctgggtgttgggtatctgaatatttcagtagagcaggtatggtcagtttttcagagaca-ttttaccatcttacttgcccatcggcaactc-gtaagatattatgtggaacaacattctctccaacaacctctactagcagtctttgtaaagtttgtcaattaa i chlSab2.chrUn_KE147573v1 I 31 C 0 s manLeu1.NW_012101734v1 982 265 + 48813 AAAAAACTTCAGGAAACCTAGTGTGATTATTTTTAATAGAAATGGATATTTTAATACAGGTCTCTTGTTTTTTCTTGTGGAAATAAATGACAAGACAGAATTTCTGAGTGTTTGGTATCTGAATATTTCAGCAGAGCAGGTATGATCAgtttttcagagaca-ttttaccatcttacttgcccatcggcaactc-gtaagatattacgtggaacaacatcctctccaacaacctctactagcagtctttgtaaagtttgtcaattaa i manLeu1.NW_012101734v1 I 31 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=31564.000000 s hg38.chr9_KI270719v1_random 110435 27 + 176845 atgggtgttttttagtt------tttgtttttg s panTro5.chr9 41285973 21 + 116767853 atgggtgtttttt------------tgtttttg i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132579711 33 + 247869975 atgggtgtTTGtttgtttttgtatttgtttttg i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 80047 19 + 95358 atgggtGAttt--------------tgtttttg i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 280589 21 + 1485088 atgggtgtttttt------------tgtttttg i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 2084 27 - 98917 atgggtGtttttttgtttc------tgtttttg i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 30520 21 + 85383 atgggtgtt------tttt------tgtttttg i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 1247 27 + 48813 atgggtGtttttttgtttt------tgtttttg i manLeu1.NW_012101734v1 C 0 C 0 e papAnu3.chrUn_NW_003880647v1 12852 3730 + 19535 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e macFas5.chr10 28744654 0 + 96509753 C a score=4068.000000 s hg38.chr9_KI270719v1_random 110462 6 + 176845 tttttc s panTro5.chr9 41285994 6 + 116767853 tttttg i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132579744 6 + 247869975 tttttg i panPan2.chr2B C 0 I 1 s gorGor5.CYUI01000801v1 80066 6 + 95358 tttttc i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 280610 6 + 1485088 tttttg i nomLeu3.chrUn_GL397501_2 C 0 I 1 s cerAty1.NW_012004463v1 2111 5 - 98917 ttttc- i cerAty1.NW_012004463v1 C 0 I 2 s papAnu3.chrUn_NW_003880647v1 16582 5 + 19535 ctttc- i papAnu3.chrUn_NW_003880647v1 I 3730 N 0 s chlSab2.chrUn_KE147573v1 30541 5 + 85383 ttttc- i chlSab2.chrUn_KE147573v1 C 0 I 2 s manLeu1.NW_012101734v1 1274 5 + 48813 ttttc- i manLeu1.NW_012101734v1 C 0 I 2 e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e macFas5.chr10 28744654 0 + 96509753 C a score=697105.000000 s hg38.chr9_KI270719v1_random 110468 294 + 176845 tttttcaaaccgtctcaccctgtgacccaggctgtagtgctgtggcgtgatcttagctcactgcagtctttgccttccaggttcaagtgattctcctgccttggcctctcaagtagctgggactacaggtgccccccaccacacccagctaatttttgtatgtttagtaaagacagggtttcaccatgttggccaggctgttctcaa--tcctgacctcagatggtccacctgtctcagcctcctaaagcgctgggattacagtcatgagccaccgcacttggcTGGATTTTCTTt s panTro5.chr9 41286000 294 + 116767853 tttttgagaccgtctcaccctgtcacccaggctgtagtgctgctgcgtgatcttagctcactgcagtctttgccttccaggttcaagtgattctcctgccttggcctctcaagtagctgggactacaggtgccccccaccacacccagctaatttttatatgtttagtaaagacagggtttcaccatattggccaggctgttctcaa--tcctgacctcagatggtccacctgtctcagcctcctaaagcactgggattacagtcatgagccaccgcacttggcTGGGTTTTCTTT i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132579751 294 + 247869975 tttttgagacagtctcaccctgtcacccagactgtagtgctgtggtgtgatcttggctcactgcagtctctgccttccagattcaagtgattctcctgccttggcctctcaagtagctgggactacaggtgccccccaccacacccagctaatttttgtatttatagtaaagacagggtttcaccatgttggccaggctgttctcaa--tcctgacctcagatggtccacctgtctcagcctcccaaagtgctgggattacagtcatgagccaccgcacttggcTGGGTTTTCTTT i panPan2.chr2B I 1 C 0 s gorGor5.CYUI01000801v1 80072 292 + 95358 tttttgagaccgtctcaccctgtcacccaggctctagtgctgtggcgtgatcttagctcactgcagtctttgccttccaggttcaagtgattctcctgccttggcctctcaagtagctgggactacaggtgccccccaccacacccagc-aatttttgtatgtttagtaaagaca-ggtttcaccatgttggccaggctgttctcaa--tcctgacctcagatggtccacctgtctcagcctcctaaagcgctgggattacagtcatgagccaccacacttggcTGGGTTTtctct i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 280617 294 + 1485088 tttttgagacagtctcaccctgtcacccaggctgtagtgctgtggcgtgatcttggctcactgcagtctctgccttccaggttcaagtgattctcctgccttggcctctcaagtagctgggactacaggtgccccccaccacacccagctaatttttgtatttttagtaaagacagggtttcaccatgttggccaggctggtctcaa--tcctgacctcagatggtgcacctgtctcagcctcccaaagcgctgggattatagtcatgagccaccacacgtggcTGGGTTTTCTTT i nomLeu3.chrUn_GL397501_2 I 1 C 0 s cerAty1.NW_012004463v1 2118 296 - 98917 tttttgagacagtctcaccctgtcacccaggctatagtgctgtgtcgtgatcttggcttactgcagtgtctgccttccaggttcaagtgattctcctaccttggcctctcaagcagctgggactacaggtggcccccaccacacccagctaattttcataattttagtaaagacagggtttcaccatgttggccaggttgttctcaaactcctgacctcagatggtccacccgtctcagcctcccaaagtgctgggattacagtcatgagccaccgcacttgacTGGGTTTTCTTT i cerAty1.NW_012004463v1 I 2 I 22 s chlSab2.chrUn_KE147573v1 30548 296 + 85383 tttttgagacagtctcaccctgtcacccaagctatagtgctgtgtcgtgatcttggcttactgcagtgtctgccttccaggttcaagtgattctcttgccttggcctctgaagcagctgggactacaggtgccccccaccacacccagctaatttttataatttcagtaaagacggggtttcatcatgttgaccaggttgttctcaaactcctgacctcagatggtccacccgtctcagcctcccaaagtgctgggattacagtcatgagccaccgcacttgacTGGATTTTCTTT i chlSab2.chrUn_KE147573v1 I 2 I 22 s manLeu1.NW_012101734v1 1281 295 + 48813 tttttgagacagtctcaccctgtcacccaggctatagtgctgtgtcgtgatcttggcttactgcagtgtctgccttccaggttcaagtgattctcctgccttggcctctcaagcagctgggactacaggtggcccccaccacacccagctaattttcataattttagtaaagac-aggtttcaccatgttggccaggttgttctcaaactcctgacctcagatggtccacccgtctcagcctcccaaagtgctgggattacagtcatgagccaccgcacttgacTGGGTTTTCTTT i manLeu1.NW_012101734v1 I 2 I 22 e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e macFas5.chr10 28744654 0 + 96509753 C a score=3110.000000 s hg38.chr9_KI270719v1_random 110762 8 + 176845 ctctctca s panTro5.chr9 41286294 7 + 116767853 CTCTCTC- i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132580045 8 + 247869975 TTCTTTca i panPan2.chr2B C 0 I 99 s gorGor5.CYUI01000801v1 80364 8 + 95358 ctctctct i gorGor5.CYUI01000801v1 C 0 I 2 s nomLeu3.chrUn_GL397501_2 280911 8 + 1485088 TTCTTTCT i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 1576 22 + 48813 I e chlSab2.chrUn_KE147573v1 30844 22 + 85383 I e cerAty1.NW_012004463v1 2414 22 - 98917 I e macFas5.chr10 28744654 0 + 96509753 C a score=611.000000 s hg38.chr9_KI270719v1_random 110770 3 + 176845 ctc s gorGor5.CYUI01000801v1 80374 3 + 95358 ctc i gorGor5.CYUI01000801v1 I 2 C 0 s nomLeu3.chrUn_GL397501_2 280919 3 + 1485088 TTC i nomLeu3.chrUn_GL397501_2 C 0 I 162 e panPan2.chr2B 132580053 99 + 247869975 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 1576 22 + 48813 I e chlSab2.chrUn_KE147573v1 30844 22 + 85383 I e cerAty1.NW_012004463v1 2414 22 - 98917 I e macFas5.chr10 28744654 0 + 96509753 C e panTro5.chr9 41286301 0 + 116767853 C a score=68.000000 s hg38.chr9_KI270719v1_random 110773 12 + 176845 tctct-ctctctc s panTro5.chr9 41286301 2 + 116767853 -----------TC i panTro5.chr9 C 0 C 0 s gorGor5.CYUI01000801v1 80377 13 + 95358 tctctcctctctc i gorGor5.CYUI01000801v1 C 0 C 0 e panPan2.chr2B 132580053 99 + 247869975 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e manLeu1.NW_012101734v1 1576 22 + 48813 I e chlSab2.chrUn_KE147573v1 30844 22 + 85383 I e cerAty1.NW_012004463v1 2414 22 - 98917 I e macFas5.chr10 28744654 0 + 96509753 C e nomLeu3.chrUn_GL397501_2 280922 162 + 1485088 I a score=2313.000000 s hg38.chr9_KI270719v1_random 110785 6 + 176845 tctctc s panTro5.chr9 41286303 6 + 116767853 TCTCta i panTro5.chr9 C 0 C 0 s gorGor5.CYUI01000801v1 80390 6 + 95358 tctctc i gorGor5.CYUI01000801v1 C 0 C 0 s cerAty1.NW_012004463v1 2436 6 - 98917 tatata i cerAty1.NW_012004463v1 I 22 C 0 s chlSab2.chrUn_KE147573v1 30866 6 + 85383 tacata i chlSab2.chrUn_KE147573v1 I 22 C 0 s manLeu1.NW_012101734v1 1598 6 + 48813 tatata i manLeu1.NW_012101734v1 I 22 C 0 e panPan2.chr2B 132580053 99 + 247869975 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e macFas5.chr10 28744654 0 + 96509753 C e nomLeu3.chrUn_GL397501_2 280922 162 + 1485088 I a score=4011.000000 s hg38.chr9_KI270719v1_random 110791 2 + 176845 ct s panTro5.chr9 41286309 2 + 116767853 ct i panTro5.chr9 C 0 C 0 s gorGor5.CYUI01000801v1 80396 2 + 95358 ct i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 281084 2 + 1485088 ct i nomLeu3.chrUn_GL397501_2 I 162 C 0 s cerAty1.NW_012004463v1 2442 2 - 98917 ct i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 30872 2 + 85383 ct i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 1604 2 + 48813 ct i manLeu1.NW_012101734v1 C 0 C 0 e panPan2.chr2B 132580053 99 + 247869975 I e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e macFas5.chr10 28744654 0 + 96509753 C a score=165492.000000 s hg38.chr9_KI270719v1_random 110793 77 + 176845 ttaagttctgggataaatgtgcagaacatgcagttttgttacacaggtatacatgtgtcatggtggtttgctgca---------AC s panTro5.chr9 41286311 77 + 116767853 ttaagttctgggataaatgtgcagaacatgcagttttgttccacaggtatacatgtgtcatggtggtttgctgca---------AC i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132580152 83 + 247869975 ttaagttctgggataaatgtacagaatgtgcaggtttgttacatagatatacatgtgtca---tggtttgctgcaAAATGTGCGAA i panPan2.chr2B I 99 C 0 s gorGor5.CYUI01000801v1 80398 77 + 95358 ttaagttctgggataaatgtgcagaacatgcaggtttgttacacaggtatacctgtgtcatggtggtttgctgca---------AC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 281086 76 + 1485088 ttaagttctgggataaatgtgcagaacatgcaggtttgttacataggtatacatgtgtcatggtggtttgctgca---------A- i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 2444 77 - 98917 ttaagttctgggataaatgtgtagaacatgcaggtttgctacataggtatacatgtgtcatggtggtttgctgca---------AA i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 30874 77 + 85383 ttaagttctggaataaatgtgtagaacatgcaggttcgttagataggtacacatgtgtcatggtggtttgctgca---------AA i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 1606 76 + 48813 ttaagttctgggataaatgtgtagaacgtgcaggtttg-tacataggtatacatgtgtcatggtggtttgctgca---------AA i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e macFas5.chr10 28744654 0 + 96509753 C a score=1235861.000000 s hg38.chr9_KI270719v1_random 110870 462 + 176845 ATGGGTGTAGGTTTTGCAGGTAATTATTATATTATTAAAAGATAACAGAATACCTAGCT--AAAAAAAA--AATGCAAGGAGGCATTGATGGGCACATGTTTACTGAGCACATCCTGACTCCAGAATTAAA---AATCCAATTTATGTCTCTGTAGTCCAATAAAATTTTTCCTTAAGAATCCAGGGATCAGACTTTCATCTCAGCAAccactccaatatggtttctcacctactcattccaacg-agctgctcatatcaaaatataagtgctatccatattgttaaattataaattgaaccataacttctcggccttcatcttaatttatatatcagcagcatttcacacagttgatct----ccaccttctctttgtaaaacttt--tttatagaattccagaacacttaacttactttccccccactacgtttttgataattacccctagtccttttttgcaggtttcatctt s panTro5.chr9 41286388 460 + 116767853 ATGGGTGTAGGTTTTGCAGGTAATTATTATATTATTAAAAGATAACAGAATACCTAGCT--AAAAAAAA----TGCGAGGAGGCATTGATGGGCACATGTTTACTGAGCACAACCTGACTCCAGAATTAAA---AATCCAATTTATGCCTCTGCAGTCCAATAAAATTTTTCCTTAAGAATCCAGGGATCAGACTTTCATCTCAGCAAccactccaatatggtttctcacctactcattccaacg-agctgctcatatcaaaatataagtgctatccatattgttaaattataaattgaaccataacttctcagccttcatcttaatttatatatcagcagcatttcacacagtctatct----ccaccttctctttgtaaaacttt--tttatagaattccagaacacttaacttactttccccccaccacgtttttgaaaattacccctagtccttttttgcaggtttcatctt i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132580235 462 + 247869975 ATGGGTGTAGGTTTTGCAGGTAGTTATTATATTATTAAAAGATAACAGAATACGTAGCT--AAAAAAAA----TGCGAGGAGGCATTGATGGGCACATGTTTACTGAGCACATCCTGACTCCAGAATTAGA---AATCCAATTTATGCCTCTGCAGTCCAATAAAATTTTTCCTTAAGAATCCAGAGATCAGACTTTCATTTCAGCAAAcactccaatatggtttctcacctactcgccccaacgaagctgctcgtatcaaaacataagtgctatgcatattgttaaattataaattgaaccataactcctcagacttcgtcttaatttatatatcagcagcatttcacacagttgatct----cctcctcctctttgtaaaacttta-tttatagaattccagaacacttaacctactttccctccaccatgtttttgataattacctctagtccttttttgcaggtttcatctt i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 80475 460 + 95358 ATGGGTGTAGGTTTTGCAGGTAATTATTATATTATTAAAAGATAACAGAATACCGAGCT--AAAAAAAA----TGCGAGGAGGCATTGATGGGCACATGTTTACTGAGCACATCCTGACTCCAGAATTAAA---AATCCAATTTATGCCTCTGCAGTCCAATAAAATTTTTCCTTAAGAATCCAGGGATCAGACTTTCATTTCAGCAAccactccaatatggtttctcacctactcattccaacg-agctgctcatatcaaaatataagtgctatccatattgttaaattataaattgaaccataacttctcagccttcatcttaatttatatatcagcagcatttcaca-agttgatct----ccaacttctctttgtaaaactttt-tttatagaattccagaacacttaacctactttctccccaccacatttttgataattacccctagtccttttttgcaggtttcatctt i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 281162 466 + 1485088 ATAGGTGTAGGTTTTGCAGGTAATTATTATATTATTAAAAGATAACAGAATACCTAGCT--AAAAAAAAAAAATGTGAGGAGGCATTGATGGGCACATGTTTACTGAGCACATCCTGACTCCAGAATTAAA---AATCCAACTTATGCCTCTGCAGTGCAATAAAACTTTTCCTTAAGAATCCAGAGATCAGACTTTCATTTCAGCAAAcactctaatgtggtttctcgcctactcactccaatgaagctgctcatatcaaaacataagtgctatccatattgttaaattataaattgaaccataactcctcggccttcatcttaatttatatatcagcagcatttcacacacttgatct----ccacctcctctttgtaaaactttt-tttatagaattccagaacacttaacctactttccccccaccatgtttttgataattacccctagtccttttttgcaggtttcatctt i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28744654 461 + 96509753 acgggtgtGGGTTTTGCAGGTGATTATTCTGTTATTGAAAGATAACAGGATACCCAGCT--TTAAAA---------AGCGAGGCATGCAGAGGCACAAGTTTA--GAGTGTGTCCCAACCCCTGAATTAAAACTAATCCGATTTGTGCCTCCACTGTTCAATAAAAATTGTCCTTAAGAATCCAGAGACCAGGcattcctttgagaaaccactccgatatggtttctcccctactcactccaagaaatttgctcttatcaaagcgcaaacgatatctatattgtgaaatgatgaattgaagcataattcctcagcctttgtcttaatttatggatcagtagcattgaacgcagttgatctctccctccctccttttttcaaagctttctttgagagaattccagaacacttaacctactttc-ccctg-gacatttttgataattaccccgagtacttttttgctggtttcttctc i macFas5.chr10 C 0 I 303 s cerAty1.NW_012004463v1 2521 464 - 98917 ATGGGTGTGGGTTTTGCAGGTAATTGTTATATTATTAAAAGATAACAGAATACCTAGCT--AAAAAAA-----TGCAAGGAGGCATTGATGGGCACATGTGTACCGAGTACATCCTGACTTCAGAATTAAAACTAATCCAATTTATGCCTCTGTACTCCAATAAAATTTTTCCTCAAAAATCCATAGATCAGACATTCATTTCAGCCAccactccaatatggttttccacctactcactccaacgaagctgctcatatcaaaacataagtgctatccatattgttaaattataaattgaactgtaactcctcggcctttgtcttaatttatgtatcggcagcattgcacacagttaatct----ccacctcctcttcgtgaaacttttcttgatagaattccagaacacttaacctactttc-ccccaccacattttttataattatccctagtccttttgtgcaggtttcatctt i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 30951 466 + 85383 ATGGGTGTAGGTTTTGCAGGTAATTGTTATATTATTAAAAGATAACAGAATACCTAGCTAAAAAAAAA-----TGCGAGGAGGCATTGATGGGCATATGTTTACCGAGTACATCTTGACTTCAGAATTAAAACTAATCCAATTTATGCCTCTGCAGTCCAATAAAATTTTTCCTTAAGAATCCAGAGATCAGACATTCATTTCAGCCAccactccaatatggttttccacctactcattccaacaaagctgctcatatcaaaacataagtgttttccatattgttaaattataaattgaaccgcaactcctcggcctttgtcttaatttacgtatcggcagcattgcacacagttaatct----ccacctcctcttcgtgaaacttttcttgatagaattgcagaacacttaacctactttc-ccccaccacgtttttgataattacccctagtccttttgtgtaggtttcatctt i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 1682 464 + 48813 ATGGGTGTGGGTTTTGCAGGTAATTGTTATATTATTAAAAGATAACAGAATACCTAGCT--AAAAAAA-----TGCAAGGAGGCATTGATGGGCACATGTTTACCGAGTACATCCTGACTTCAGAATTAAAACTAATCCAATTTATGCCTCTGCAGTCCAATAAAATTTTTCCTTAAGAATCCAAAGATCAGACATTCATTTCAGCCAccactccaatatggttttccacctactcactccaatgaagctgctcatatcaaaacataagtgctatccatattgttaaattgtaaattgaaccgtaactcctcggcctttgtcttaatttatgtatcggcagcattgcacacagttaatct----ccacctcctcttcgtgaaacttttcttgatagaattgcagaacacttaacctactttc-ccccaccacgtttttgataattacccctagtccttttgtgcaggtttcatctt i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=600090.000000 s hg38.chr9_KI270719v1_random 111332 219 + 176845 tactattttttaaatgttagaggaccattaggctcaggactttgacttcttatctttcttatctttgctttcttactaatttttgtgtcattaatttcctgatatttcatattacacctaaacactggacactacacccaacactccctgacttttccacgtggatgtcagttaagaatctcaaaattaatatgtctgtatggagccactgaaactccc s panTro5.chr9 41286848 219 + 116767853 tactatttttcaaatgttagaggaccattaggctcaggactttgacttcttatctttcttatctttgctttcttactaatttttgtgtcattaatttcctgatatttcatattacacctaaacactggacactacacccaacactccctgacttatccatgtggatgtcagttaggaatctcaaaattaatatgtctgtatggagccactgaaactccc i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132580697 219 + 247869975 tactattttttaaatgtcagaggacgattaggctcacgactttgacttcttatctttcttatctttgctttcttactgatttttgtgtcattaatttcctgatatttcgcattacacttaaacactggacactacatccagcactccctgacttatccacatggatgtcagttaggaatctcaaaattaatatgtctatatggagccactgaaactccc i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 80935 219 + 95358 tgctatttttcaaatgttagaggaccattaggctcaggactttgacttcttatctttcttatctttgctttcttactaatttttgtgtcattaatttcctgatatttcatattacacctaaacactggacactacacccaacactccctgacttatccacgtggatgtcagttaggaatctcaaaattaatatgtctgtatggagccactgaaactccc i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 281628 219 + 1485088 tactatttttgaaatgttagaggaccattaggctcaggactttgacttcttatctttcttatctttgctttcttactaatttttgtatcattaatttcctgatatttcatattatacctaaacactggacactacacccaacactccctgacttatccacgtggatgtcagttaggaatcccaaaattaatatgtctatgtggagccactgaaactccc i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28745418 214 + 96509753 tactactttttgggtgttagataaccactagattcaggacttcga---cttatgtttcttatcGTTGCTTTCTTACTAATTTTTGTGTTATTCATTTCCTGATATTCTCTTTGATGCGGTaacactag--actacgcacaacactgtctgacttctccatttggatgtcagttaggaatctcaaaattaataagtccacatggagccactgacattccc i macFas5.chr10 I 303 C 0 s cerAty1.NW_012004463v1 2985 214 - 98917 tactattttttaaatgttagagaaccattagcctcaggactttgacttcttatctttcttatctttgc-ttcttactaatttttgtgtcattaatttcctgatagttcatattacacctaaactctggacactacacccaacactccctgacttatccacttggatgtcggtta-gaatcccaaaattaatgtgt--atatggagcccactgtact-cc i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 31417 218 + 85383 tactattttttaaatgttagagaaccattagcctcaggactttgacttcttatctttcttatctttgctttcttactaatttTTGTGTCATTCATTTCCTGATAGTTCATATTACAcctaaactctggacactacacccaacactccctga-ttatccacttgaatgtcagttaggaatctcaaaattactatgtctatatggagccactggtactccc i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 2146 219 + 48813 tactattttttaaatgttagagaaccattagcctcaggactttgacttcttatctttcttatctttgctttcttactaatttttgtgttattcatttcctgatagttcatattacacctaaactctggacactacacccaacattccctgacttatccacttggatgtcagttaggaatctcaaaattaatgtgtctatatggagccactggtactccc i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=-2252.000000 s hg38.chr9_KI270719v1_random 111551 1 + 176845 -a s panTro5.chr9 41287067 1 + 116767853 -c i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132580916 1 + 247869975 -c i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 81154 1 + 95358 -c i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 281847 1 + 1485088 -c i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28745632 1 + 96509753 -c i macFas5.chr10 C 0 C 0 s cerAty1.NW_012004463v1 3199 1 - 98917 -c i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 31635 1 + 85383 -c i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 2365 1 + 48813 -c i manLeu1.NW_012101734v1 C 0 C 0 s tarSyr2.KE939950v1 40154 1 + 1213546 a- i tarSyr2.KE939950v1 N 0 N 0 e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=407003.000000 s hg38.chr9_KI270719v1_random 111552 151 + 176845 aaatttgctcttccccattctgtttaatggcaactcccattttatagtttctcagctcaatattcttggtgtccccttttaat----tctgtctctGTAGctctgtcactctcttcctgtatctgtctgattctctccctctctctcctctctct s panTro5.chr9 41287068 151 + 116767853 aaatttgctcttccccattctgtttaatggcaactcccattttatagtttctcagctcaatattcttggtgtccccttttaat----tctgtctctGTAGctctgtcactctcttcctgtatctgtctgattctctccctctctctcctctctct i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132580917 151 + 247869975 aaatttgctcttccccattctgtttaatggcaactcccattttatagtttctcagctcaatattcttggtgtccccttttaat----tctgtctctGTAGctctgtcactctctttctgtatctgtctgattctctccctctctctcctctctct i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 81155 151 + 95358 aaatttgctcttccccattctgtttaatggcaactcccattttatagtttctcagctcaatattcttggtgtccccttttaat----tctgtctctGTAGctctgtcactctcttcctgtatctgtctgattctctccctctctctcctctctct i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 281848 151 + 1485088 aaatttgctcttccccattctgtttaatggcaacacccattgtatagtttctcagctcaatattcttggtgtccccttttaat----tctgtctctGTAGctctgtcactctctttctgtatctgtctgattctctccctctctctcctctctct i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28745633 146 + 96509753 gaaactgctcttccccattctgtttaatggcacctcccatttaatagtttctcagctcaatattcttggtgtccccttttaattctctctgtcactGCAGCTTTGtcactgtctctctgtacctgtctggttctc---------attctctctct i macFas5.chr10 C 0 C 0 s cerAty1.NW_012004463v1 3200 150 - 98917 aaacttgcctcttcccattctgtttaatggtaattcccattttatagtttctcagctcatatatcttagtgtccccttttaattctctctgttctTGTAGctctgtcactctctttctg----tgtctgattctctcccccc-tctcctctctct i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 31636 145 + 85383 aaacttgctcttccccattctgtttaatggtaattcccatttcatagtttctcagctcaatatacttagtgtccccttttaat----tctgtctctGTAGctctgtcactctctttctg----tgtctgattctctccccac--ctcctctctct i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 2366 149 + 48813 aaacttgctcttcctcattctgtttaatggtaattcccattttatagtttctcagctcaatatacttggtgtccccttttaattctctctgtctctGTAGctctgtcactctctttctg----tatctgattatctcccccg--ctcctctctct i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115769664 1606 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=8595.000000 s hg38.chr9_KI270719v1_random 111703 2 + 176845 ct s panTro5.chr9 41287219 2 + 116767853 ct i panTro5.chr9 C 0 C 0 s panPan2.chr2B 132581068 2 + 247869975 ct i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 81306 2 + 95358 ct i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 115771270 2 - 135191526 ct i ponAbe2.chr9 I 1606 I 12737 s nomLeu3.chrUn_GL397501_2 281999 2 + 1485088 ct i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28745779 2 + 96509753 ct i macFas5.chr10 C 0 C 0 s cerAty1.NW_012004463v1 3350 2 - 98917 ct i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 31781 2 + 85383 ct i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 2515 2 + 48813 ct i manLeu1.NW_012101734v1 C 0 C 0 e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=2749649.000000 s hg38.chr9_KI270719v1_random 111705 1046 + 176845 tgctcactctcactcttgctctctttccctGCTTcacacgcacacaaacacacacagacag------------------------------acacacacacacacacacacaT---TTTCAGATCTGATGTGTATGGAATTCCTGCCAGCTTTACCTTTAAAGTGTAGTAATTCCAAATGTTGTT-GAAAATTCACCTTCCCACCCCCACCACTTGGTAACTATAGCGCTTTCCACACAAGGCCAAG-------TGCACAGATTTCTTGGGGAAATAATGAGAACTATTATACACTCTTATTTCAAGGACCCTTAAAATTATAGGATTGCCATATTTGATACTAATTTAAgcttctgtcattgcccc-tttttcaatccagtctccacacagctaccacagtgtgcaagtagaagtctcagccatatcaccaaactcctgctttaatgtccctactccattgcttcttttctccttcagaAGAGTTTAAGCTTAATGAAGCTGGGCAACTTTACATA-TTTTTCCAT-------------GAGCTGGAGATCACTTGGTGTAAGGTAAAAATGACCAGTAAATATTTTCAAATAACAGAATCTACGAATAATAGTCTTGTTTCTTTGAGAGTACATTGACTTTTAAAAATCAAGAAAATAGATTGGTCAAGAGAATTCTGCTTGTTTTGATTTTGTTATC------CCTCGATTAGATTAACTGTGTTAGTATAAAAGTCAGTGTGGAAAGCTATAAGCAATTCCTAAACTTTAAAATGAAAGGCATGGAATTTAAATATCTGTTCCTTTTATTCAAGCAACCAAAAAA---CATAACTTTTTAAATATATTTTATGTATGTAT--GAAATCTAAATTTATTTTTCTCTCTTTATCCCTGAATACTTTTTAAAGTTATTCATGTCCTCATTATTTTTTAATCCACTTCAGTC---ACATTTTAAAATATATTTTCGACTTCATTAAGAATATCTTTGTGTTCCACTGAATAGCTTGCCAAATAATAAAACATTAGCAGTATAATTTCCTCATAAACTTTATTTAATTTGCTTGGTTAAA--CATAGATTTCCTACTCTCAACTCATAATTTCATTCAA s panTro5.chr9 41287221 1045 + 116767853 tgctcactctcactcttgctctctctccctGCTTcacacacacacaaacacagacagaca--------------------------------cacacacacacacaTGCACAT---TTTCAGATCTGATGTGTATGGAATTCCTGCCAGCTTTACCTTTAAAGTGTAATAATTCCAAATGTTGTTTCCAAATTCACATTCCCACCCCCACCACTTGGTAACTATAGCGCTTCCCTCACAAGGCCAAG-------TGCAGAGATTTCTTGGGGAAATAATGAGAACTATTATACATTCTTATTTCAAGGACCCTTAAAATTATAGGATTACCATATTTGATACTAATTTAAGCTTCTGTCATTGCCCT-TTTTTTAATCCAGTCTCCACACAGCTACCACAGTGTGCAAGTAGAAGTCTCAGCCGTATCACCACACTCCTGCTTTAATGTCCCTACTCCATTGCTGCTTTTCTCCTTCAGAAGAGTTTAAGCTTAATGAAGCTGGGAAACTTTACATA-TTTTTCCAC-------------GAGCTGGAGATCACTTGGTGTAAGGTAAAAATGATCAGTAAATATTTTCAAATAACAGAATCCACGAATAATAGTTTTGTTTCTTTGAGAGTACATTGACTTTTAAAAATCAAGAAAATAGATTGGTCAAGAGAATTCTGCTTGTTTTGATTTTGTTATC------CCTCGATTAGATTAACTGTGTTAGTATAAATGTCAGTGTGGAAAGCTATAAGCATTTCCTAAACTTTAAAATGAAAGGCATGGAATTTAAATATCTGCTCCTTTTATTCAAGCAACCAAAAAA---CACAACTTTTTAAATATATTTTATGTATGTAT--GAAATCTAAATTTATTTTTCTCTCTTTATCCCTGAATACTTTTTAAAATTATTCATGTCCTCATTATTTTTTAATCCACTTCAGTC---ACATTTTAAAATATATTTTCGACTTCATTAAGAATATCTTTGTGTTCCACTGAATAGCTTGCCAAATAATAAAACATTAGCAGTATAATTTCCTCATAAACTTTATTTAATTTGCTTGGTTAAA--CATAGATTTCCTACTCTCAACTCATAATTTCATTCAA i panTro5.chr9 C 0 I 2513 s panPan2.chr2B 132581070 1046 + 247869975 tgctcactgtcactcttgctctctctccctGCTTcacacacacacaaacacacacagaca--------------------------------gacacacgtacacacacacaT---TTTCAGATCTGATGTGTATGGAATTCCTGCCAGCTTTACCTTTAAAGTGTAATAATTCCAAATGTTGTTTCCAAATTCACATTCCCA-CCCCACCACTTGGTAACTATAGCGCTTCCCTCACAAGGCCAAG-------TGCAGAGATTTCTTGGGGAAATAATGAGAACTATTATACATTCTTATTTCAAGGACCCTTAAAATTATAGGATTGCCATATTTGATACTAATTTAAGCTTCTGTCATTGCCCT-TTTTTCAATCCAGTCTCCACACAGCTACCACAGTGTGCAAGTAGAAGTCTCAGCCATATCACCACACTCCTGCTTTAATGTCCCTACTCCATTGCTTCTTTTCTTCTTCAGAAGAGTTTAAGCTTAATGAAGCTGGGCAACGTTACATATTTTTTCCAT-------------GAGCTGGAGATCACTTGGTGTAAGGT--AAATGATCAGTAAATATTTTCAAATAACAGAATCCACGAATAATAGTTTTGTTTCTTTGAGAGTACATTGACTTTTAAAAATCAAGAAAATAGATTGGTCAAGAGAATTCTGCATGTTTTGATTTTGTTATCGATTAGACTAGATTAGATTAACTGTGTTAGTATAAATGTCAGTGTGGAAAGCTATAAGCATTTCCTAAACTTTAAAATGAAAAGTGTGGAATTTAAGTATCTGCTCCTTTTATTTGAGCAACCAAAAAA---CACAACTTTTGAAATATATTTTAATTATGTAT--GAAATCTAAATTTATTTTTCTCTCTTTATCCCTGAATAC-TTTTAAAGTTATTCATGTCCTCATTA--TTTTAATCCACTTTAGTA---ACATTTTAAAATATATTTTCAACTTCATCAAGAATATCTTTGTGTTCCACTGAATAGCTTGCCAAATAATAAAACATTAGCAGTATAATTTCCTCATAAACATTATTTAATTTGTTTGGTTAAC--CATAGATTTCCTACTCTCAACTCATAATTTCATTCAA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 81308 1047 + 95358 tgctcactgtcactcttgctctctctccctGCTTcacacacacacaaacacacacagacaga----------------------------cagacacacaaacacacgcacaT---TTTCAGATCTGATGTGTATGGAATTCCTGCCAGCTTTACCTTTAAAGTGTAATAATTCCAAATGTTGTTTCCAAATTCACATTCCCACCCCCACCACTTGGTAACTATAGCGCTTCCCTCACAAGGCCAAG-------TGCAGAGATTTCTTGGGGAAATAATGAGAACTATTATACATTCTTATTTCAAGGACCCTTAAAATTATAGGATTGCCATATTTGATACTAATTTAAGCTTCTGTCATTGCCCT-TTTTTCAATCCAGTCTCCACACAGCTACCACAGTGTGCAAGTAGAAGTCTCAGCCATATCACCACACTCCTGCTTTAATGTCCCTACTCCATTGCTTCTTTTCTCCTTCAGAAGAGTTTAAGCTTAATGAAGCTGGGC-ACTTTACATA--TTTTCCAC-------------GAGCTGGAGATCACTTGGTGTAAGGTAAAAATGATCAGTAAATATTTTCAAATAACAGAATCCACGAATAATAGTTTTGTTTCTTTGAGAGTACATTGACTTTTAAAAATCAAGAAAATAGATTGGTCAAGAGAATTCTGCTTGTTTTGATTTTGTTATC------CCTCGATTAGATTAACTGTGTTAGTATAAATGTCAGTGTGGAAAGCTATAAGCGTTTCCTAAACTTTAAAATGAAAGGCATGGAATTTAAATATCTGCTCCTTTTATTCAAGCAACCAAAAAA---CACAACTTTTTAAATATATTTTATGTATGTAT--GAAATCTAAATTTATTTTTCTCTCTTTATCCCTGAATACTTTTTAAAGTTATTCATGTCCTCATTATTTTTTAATCCACTTCAGTC---ACATTTTAAAATATATTTTCGACTTCATTAAGGATATCTTTGTGTTCCACTGAATAGCTTGCCAAATAATAAAACATTAGCAGTATAATTTCCTCATAGACTTTATTTAATTTGCTTGGTTACA--CATAGATTTCCTACTCTCAACTCATAATTTCATTCAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 282001 1068 + 1485088 tgctcgctcttactcttgatctctctccctGCTTcacacacacacaaacacacacacacagacacacacaaacacacacacacagacacgcacacacacacacacacaAATAT---TTTCAGATCTGATGTGTATGGAATTCCTGCCAGCTTTACCTTTAAAGTGTAGTAATTCCAAA---TGTTTCCAAATTCATCTTCCCACCCCCATCACTTGGTAACTATAGCCCTTCCCTCACAAGGCCAAG-------TGCAGAGATTTCTTGGGGAAATAATGAGAACTATTATACATTCTTATTTCAAGGATGCCTAAAATTATAGGATTGCCATATTTGATACTAATTTAAgcttctgtcattgccgt-tttttcagtccattctccacacaggtaccacagtgtgcaagtagaagtctcagccatatcaccacattcctgctttaatgtccctactccgttgcttcttttctccttcagaAGAGTTTAAGCTTAATGAAGCTGGGCAACTTTACATA-TTTTTCCAT-------------GAGCTGGATACCACTTGGTGTAAGGT--AAATGATCAGTAAATATTTTCAAATAAC--AATCCACGAATAATAGTTTTGTGTCTTTGAGAGTACATTTACTTTTAAAAATCAAGAAAATAGATTGGTCAAGAGAATTCTGCTTGTTTTGATTTTGTTATC------ACTCGATTAGATTAACTGTGTTAGTATAAATGTCAGTGTGGAAAGCTATAAGCATTTCCTAAACTTTAAAATGAAAGGCATGGAATTTAAATATCTGCTCCTTTTATTCAAGCAACCAAAAAA---CACAACTTTTTAAATATATTTTATGTATGTAT--GAAATCTAAATTTATTTTTCTGTCTTTATCCCTGAATACTTTTTAAAGTTATTCACGTCCTCATTA--TTTTTATCCACTTCAGTG---ACATTTTAAAATATATTTTCGACTTCATTAAGAATATCTTTGTGTTCCACTGAATAGCTTGCCAAATAATAAAATATTAGCAGTATAATTTCCTCATCAACATTATTTAATTTGTTTGATTAAA--CATAGATTTCCTACTCTCAACTCATAATTTCATTGAA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28745781 1025 + 96509753 tgctc----tttctatctctctctat----------------------cACACACACATG------------------------------------------CACGCACACAC---TTTTGGATCTAACATGTATGAAAATCCTGCCAGCTTTACCTTTAAGGTGAAGTCATTCCAGATGGTATCTGCAAATTCACCTTCCCACCCTCACCACTTGCTGACTATAGTACTTCCCTCACAAGACCAAAGCTCCACTGCAGAGATTTCTTGAGGAAATAATGAGAAATATTACACATTCTTTTTTCAGAGGCCCTCAAAA-TGCAGGACAGCCATGCTCTAAAAGAATTTAAgcttctatcattgccctatgtttcaatccagtctccacacagcaagcacagtattcaattcgagttccaagtcatatcacaacactcctgttttaaagtccctgatcaattacttcttttcttcctcattagaatttaaacttaacgaagttgggcaactttgtata-ttttaccactgacctatcttcagagctggaggtcacttggtgcaagat--aaatgatcagcaaatatttTCAAACAGCAGAATCAGTTATAAACAGTTTTA-TTATTAGAGTACACATTGAGACTTCAAAATCAAGAAAATAGATTTGTCAAGAGAATTC----TGTTTTGATTTTGTTATC------CCTTGATTAGATGATCTGTCTTAGTATAAATTTCAGTGTGGGAAGCTGTAAGCATTTTCTAAATTTTAAAATAAAAGGCAAGGAATTTAAACATCTGCTCCTTTTACTTAAGGAATAAAAAAAATGTGTATCTTTTGAAATACACTTTATATATGTATACACAATCTAAATTTATTTTTCTGTCTTTTACCCTGAATACTTTGTAAAGGTATTCATGTCCTCATTT-TTAAAAATCCACTTTGATAATCACATTTTAAAAGATATATGCATCTTCCTTAAGAATATCTTGGTGTTCCACTGAACAACTTGCCAAATAAT---ACATTAGCGGCACAACTGCCTCATA---ATTCTTTAATTTGTTTGATTAAATTTATAAATTTCCTACTCTCAACTCATAATTTCGTTCAC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012004463v1 3352 1038 - 98917 tgctcactgtcacttttgctctctgtcC-TGTTTcacacacac-caaacacacacacaga------------------------------------------cac-cacacacaTTTTTTAGATCTATAGTGTATGGATTACCTGCCAGCTTTACCTTTAAAGTGTAGTAATTCCAGATGTTGTTTCCAAATTCACCTTCCCACCCCCACCACTTGGTAACTGTAGCGCTTCCCTCACAAGGCCAAGGCTCTACTGCAGAGATGTCTTGGGGAAATAATGAGAACTATTATACATTCTTCATTCAAGGATCCTTAAAATTATAGGATCGCCATATTTGATACTAATTTAAGCTTCTGTCATTGCCCT-TTTCTCAATCCAGTCTCCACACAGCGACCACAGTATGCAAGTAGAAGTCTCAGTCGTATCTCCACACTCCTTCTTTAATGTCCCTACTCCATTGCTTCTTTTCTCCTTCATAAGAGTTTCAGCTTAACGAAGCCAGGCAACTTTACATA-TTTTTCCAT-------------GAGATGGCGATCTCTTGGTGTAAGGT--AAATGATCAGTAAATATTTTCAAATAACAGAATCCATGAATAATAGCTTTGTTTCTTTGAGAGTACATTTACTTATAAAAGTCAAGAATATAGATTGGTCAAGAGAATTCTGCTTGTTTTGATTTTGTTATC------GCTCGATTAGATTAGCTGTGTTAGTATAAATGTCAGTGTGGAAAGCTATAAGCATTTCCAAGACTTTAAAATGAAAGGCATGAAATTTAAATATCTGCTCCTTTTATTCGAGCCACCAAAAAA---CACAACTTTTTAAATATATTTTATATATGTAT--AAAATCTAAATTAATTTTTCTCTCTTTATCCCTGAATACTTTTTAAAGTTATTCATGTCCTCATTA-TTTTTAATCC-CTTCAATA---ACATTTTAAAATATATTTTCAACTTCATTAAGAATATCTTTCTGTTCCACTGAATAGCTTGCCAAATAATAAAACATTAGCAGTATAATTTCCTCATAAACATTATTTAATTTGTTTGGTTAAA--CATAGATTTCCTACTCTCAACTCATAATTTCATTCAA i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 31783 1035 + 85383 tgctcactgtcacttttgctctctctccctGTTTcacacacacacaaacacacacagaca------------------------------------------cacacacaTAT---TTTCAGATCTGATGTGTATGGATT-CCTGCCAGCTTTACCTTTAAAGTGTAGTAATTCCAGATGTTGTTTCCAAATTCACCTTCCCACCCCCACCACTTGGTAACTGTAGCGCTTCCCTTCCAGGGTCAAGGCTCTACTGCAGAGATTTCTTGGGGAAATAATGAGAACTATTATGCATTCTTAATTCAAGGATCCTTAAAATTACAGGATCGCCATATTTGATACTAATTTAAGCTACTGTCATTGCCCT-TTTTTCAATCCAGTCTCCACGCAGCAACCACAGTATGCAAGTAGAAGTCTCAGTCGTATCTCCACACTCCTTCTTTAATGTCCCTACTCCATTGCTTCTTTTCTCCTTTATAAGAGTTTCAGCTTAATGAAGCCGGGCAACTTTACATA-TTTTCCCAC-------------GAGCTGGAGATCACTTGATGTAAGGT--AAATGATTAGTAAATATTTTCAAATAACAGAATCGATGAATAATAGC----TTTGTTTGAAAGTACATTTGCTTATAAAAATCAAGAAAATAGATTGGTCAAGAGAATTCTGCTTGTTTTGATTTTGTTATC------ACTCGATTAGATTAGCTGTGTTAGTATAAATGTCAGTGTGGAAAGCTATAAGCATTTCCAAGACTTTAAAAGGAAAGGCATGAAGTTTAAATATCTGCTCCTTTTATTCGCGCCACCAAAAAA---CACAACTTTTTAAATATATTTTATATACGTAT--AAAATATAAATTAATTTTTCTCTCTTTATCCCTGAATACTTTTTAAAGTTATTCATGTCCTCATTATTTTTTAATCCACTTCAATA---ACATTTTAAAATATATTTTCAACTTCATTAAGAATATCTTTGTGTTCCACTGAATAGCTTGCCAAATAATAAAACATTAGTAGTATAATTTCCTCATAAACATTATTTAATTTGTTTGGTTAAA--CATAGATTTCCTACTCTCAAGTCATAATTTCATTCAA i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 2517 1020 + 48813 tgcccactgtcactcttgctctctctcCTTGTTTcacacacacacaaacacacacagaca------------------------------------------cacacacaTAT---TTTCCGATCTGATGTGTATGGATT--------------CCTTTAAAGTGTAGTAATTCCAGATGTTGATTCCAAATTCACCTTCCCACCCCCACCACTTGGTAACTATAGCGCTTCCCTCACAAGGCCAAGGTTCTACTGCAGAGATGTCTTGGGGAAATAATGAGAACTATTATGCATTCTTAATTCAAGGATCCTTAGAATTATAGGATCGCCATATTTGATACTAATTTAAGTTTCTGTCATTGCCCT-TTTCTCAATCCAGTCTCCATACAGCGACCACAGTATGCAAGTAGAAGTCTCAGCCGTATCTCCACACTCCTTCTTTAATGTCCCTACTCCATTGCTTCTTTTCTCCTTCTTAAGAGTTTCAGCTTAACAAAGCCGGGCAACTTTACATA-TTTTTCCAC-------------GAGCTGGAGATCACTTGGTGTAAGGT--AAATGATCAGTAAATATTTTCAAATAACAGAATCCATGAATAGTAGCTTTGTTTGTTTGAGAGAACATTTACTCATAAAGATCAAGAAAATAGATTGGTCAAGAGAATTTTGCTTGTTTTGATTTTGTTATC------GCTCGATTAGATTAGC--TGTTAGTATAAATGTCAGCATGGAAAGCTATAAGCATTTCCAAGACTTTAAAACGAAAGGCATGAAATTTAAATATCTGCTCCTTTTATTCAAGCCACCAAAAAA---CACAACTTTTTAAATATATTCTACATATGTAT--AAAATCTAAATTAATTTT--TCTCTTTATCCCTGAATGCTTTTTAAAGTTATTCATGTCCTCATTA-TTTTTAATCC-CTTCAATA---ACATTTTAAAATATATTTTCAACTTCATTAAGAATATGTTTGTGTTCCACTGAATGGCTTGCCAAATAATAAAACATTAGCAGTATAATTTCCTCATAAACATTATTTAATTTGTTTGGTTAAA--CATAGATTTCCTACTCTCAAATCATAATTTCATTCAA i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I a score=384826.000000 s hg38.chr9_KI270719v1_random 112751 177 + 176845 GTATAATATATTCTACTTGACATTTGCAGGGTTTTCATACCATGCATTTGTCATTGAAATTGGTTTTTGATATTTGAACCACTAGTTTATAATTGTCTTGTTGGTTAGACTGGTCTGTAGAATCTTTCTTTGTTTTGATTCTGTGGTTTATTCATTATGGAATAGCTGTGCTACTGT s panPan2.chr2B 132582116 177 + 247869975 GTATAATATATTCTACTTGACCTTTGCGGGGTTTTCATACCATGTATTTGTCATTGAAATTGGTTTTTGATATTTGAACCACTAGTTTATAATTGTATTGTTGGTTAGACTGGTCTGTAGAATCTTTCTTTGTTTTGATTCTGTGGTTTATTCATTATGGAGTAGCTGTGCTACTGT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 82355 177 + 95358 CTATAATATATTCTACTTGACATTTGCGGGGTTTTCATACCATGCATTTGTCATTGAAATTGGTTTTTGATATTTGAACCACTAGTTTATAATTGTATTGTTGGTTAGACTGGTCTGTAGAATCTTTCTTTGTTTTGATTCTGTGGTTTATTCATTATGGAGTAGCTGTGCTACTGT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 283069 177 + 1485088 GTATAATATATTCTACTTGACCTTTGTGGGGTTTTCATACCATGCATTTGTCATTGAAATTGGTTTTTGATATTTGAACCACTAGTTTATAATTGTATTGTTGGTTAGACTGGTCTGTAGAATCTTTCTTTGTTTTGATTCTGTGGTTTATTCATTATGGAGTAGCTGTGCTACTGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28746806 172 + 96509753 ACGTAATACATCCTACTTGACCTCTATGGGGTGTTCATACCATATATTTACTGTTGAAAATGG-TTTTGATATCTGAAC----AATTTATAATTGTATTGCTGGTTAGACTGTTCTGTAGAATCCCTTTTCATTTTGGTTTTGTTGCTTATTGATTACAGAGTGGCTGTGCTACTGT i macFas5.chr10 C 0 I 555 s cerAty1.NW_012004463v1 4390 174 - 98917 GTATAATATATCCTACTTGACCTTTGCGAGGTTTTCATACCCTGTATTTGTCATTGAAATTGGTTTTTGATATTTGAACCACAAGTTTATAATTGTATTGTTGGTTAGACTGGTCTGTAGAATCC---TTTGTTTTGATTCTGTGGTTTATTCATTAGAAAGTAGCTGTGCTACTGT i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 32818 174 + 85383 GTATATTATATCCTACTTGACCTTTGTGAGGTTTTCATACCCTGTATTTGTCATTGAAATTGGTTTTTGCTATTTGAACCACAAGTTTATAATTGTATTGTTGGTTAGACTGGTCTGTAGAATCC---TTTGTTTTGATTCTGTGGTTTATTCATTAGAGAGTAGCTGTGCTACTGT i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 3537 174 + 48813 GTATAATATATCCTACTTGACCTTTGCGAGGTTTTCATACCCTGTATTTGTCATTGAAATTGGTTTTTGATATTTGAACCACAAGTTTATAATTGTATTGTTGGTTAGACTGGTCTGTAGAATCC---TTTGTTTTGATTCTGTGGTTTATTCATTAGAGAGTAGCTGTGCTACTGT i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=22767.000000 s hg38.chr9_KI270719v1_random 112928 12 + 176845 AAATTTTGAGGT s panPan2.chr2B 132582293 12 + 247869975 AAATTTTGAGGT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 82532 12 + 95358 AAATTTTGAGGT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 283246 12 + 1485088 AAATTTTGAGGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 4564 12 - 98917 AAATTTTGAGGC i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 32992 12 + 85383 AAATTTTGAGGT i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 3711 12 + 48813 AAATTTTGAGGT i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e macFas5.chr10 28746978 555 + 96509753 I e panTro5.chr9 41288266 2513 + 116767853 I a score=813836.000000 s hg38.chr9_KI270719v1_random 112940 373 + 176845 CAAAAGCTTAAAACATTTTATGTATTTTAAAACAAAGTGGATGGCATTTAAATATCTATTCCTTAAAATTTGGAAGAAAGGTTAACACCATATAAACCCAGAGCCTGT-TTTTTAGATTAGTAGCATGTAGACATTTTCAATTTCTTCTAAAGTTGAAAAAAATAAACATTTTATATTCATAGAATGCTTGAT----GAAGGTAAATATTTAA-TTTTCACTTAAAAGAAATTTGGTTACATTGAAAGGAAATTTGGCTAATATAAGTGAGATACATATCTAATTAAAACAATAATTTAAGATAAATAATGCTCAAAGAACAGTGGTCGTTGCATTTATTCCAGAGAGAGGACAATTATCCTGATCTGGCTGTAATAAC s panPan2.chr2B 132582305 378 + 247869975 CAAAAGCTTAAAACATTTTATGTATTTTAAAACAAAGCGGATGGCATTTAAATATCTATTCCTTAAAATTTGGAAGAAAGGTTAACACCATATAAACCCAGAGCCTGTATTTTTAGATTAGTAGCATGTAGACATTTTCAATTTCTTCTAAAGTTGAAAAAAATAAATATTTTGTATTCATAGAATGCTTGATAACAGGAGGTAAATATTTAA-TTTTCACTTAAAAGAAATTTGGTTACACTGAAAGGAAATTTGGCTAATATAAGTTAGATACATTTCTAATTAAAACAATAATTTAAGATGAATAATGCTCAAAGAACAGTGGTCACTGCATTTATTCCAGAGAGAGGACATTTATCCTGATCTGGCTGTAATAAC i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 82544 373 + 95358 CAAAAACTTAAAACATTTTATGTATTTTAAAACAAAGTGGATGGCATTTAAATATCTATTCCTTAAAATTTGGAAGAAAGGTTAACACCATATAAACCCAGAGCCTGT-TTTTTAGATTAGTAGCACGTAGACATTTTCAATTTCTTCTAAAGTTGAAAAAAATAAACATTTTATATTCATAGAATGCTTGAT----GAAGGTAAATATTTAA-TTTTCACTTAAAAGAAATTTGGTTACATTGAAAGGAAATTTGGCTAATATAAGTGAGATACATTTTTAATTAAAACAATAATTTAAGATAAATAATGCTCAAAGAACAGTGGTCGTTGCATTTATTCCAGGGAGAGGACATTGATCCTGATCTGGCTGTAATAAC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 283258 377 + 1485088 CAAAAGCTTAAAACATTTTATGTATTTTAAAATAAAGAGGATGGCATTTAAATATCTATTCCTTAAAATTTGGAAGAAATGTTAACACCATATAAACCCAGAGCCTGTATTTTTAGATTAGTAGCATGTAGACATTTTCAATTTCTTCTAAAGTTGAAAAAAATAAACATTTTGTATTCATAGAATGCTTGATAACAGAAGGTAAATATTTAA--TTTCACTTAAAAGAAATTTGGTTACATTGAAAGGAAATTTGGCTAACATAAGTTAGATACATTTCTAACTAAAACAATAATTTAAGATAAATAATGCTTAAAGAACAGTGGTCATTGCATTTATTCCAGAGAGAGGACATTTATCCTGATCTGGCTGTAATAAC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s macFas5.chr10 28747533 377 + 96509753 cAAGAGGTTGAAACATTTTCTAAATTTGAAAACAAAGTGCCTGTCATTTAAATACCTATTCCTTAAAATTTGGAAGACATGTTAATACCATATAAACCTAGAGCCTGCATTTTTAGATTAGTAACCTGTAGATGTTTTTCATTCCTTCTATAGTT-AAAACGATAAATATTTTGTATTCAGATAATTCTTGATAACAGATGGTGAATATTTAATTTTTCACTTAAAAGAAATGTGGTTACTTTGAAAAGACATTTGGTTAAGGTAAGTCAGATAAATTTCTGTTTAAAA-AATAATCTAAGAAAAATAATGCTCAAAGAGCAGCGGTCACGGCATTTATCCCAGAGAGAGGAACTTGATCTTGTTCTGCCTGTGATAAC i macFas5.chr10 I 555 N 0 s cerAty1.NW_012004463v1 4576 373 - 98917 CAAAAGCTTAAAGCATTTTATATGTTTTAAAACAAAGTGCATGGCATTTAAATACCTATTCCTTAAAATTTGGAAGAAAGGTTAACACCATACAAACCCAGAGCCTGTATTTTTAGATTAGTAGCATGTAGACATTTTCAATTTCTTCTAAAGTTGGAAAAAGTAAATATTTCGTATTCATAGAATTCTTGATAACAGAAGGTAAATACTTAA-CTTTCACTTAAAAGAAATTTGGTTACATCGGAAGGAAATTTGGC-----TAAGTTAGATACATTTCTAATTAAAACAAGAATTTAAGATAAATAATGCTCAAAGAACAGTAGTCATTGCATTTATTCCAGAGAGAGGAAGTTTATCCTGATCTGGCTGTAATAAC i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 33004 378 + 85383 CAAAAGCTTAAAGCATTTTATATGTTTTAAAACAAAGTGCATGGCATTTAAATACCTATTCCTTAAAATTTGGAAGAAAGGTTAACACCATACAAACCCAGAGCCTGTATTTTCAGATTAGTAGCATGTAGACATTTTCAATTTCTTCTAAAGTTGGAAAAAATAAACATTTTGTATTCATAGAATTCTTGATAACAGAAGGTAAATACTTAA-CTTTCACTTAAAAGAAATTTGGTTACATCGGAAGGAAATTTGGCTAATATAAGTTAGATACATTTCTAATTAAAACAATAATTTAAGATAAATGATGCTCAAAGAACAGTGGTCATTACATTTATTCCAGTGAGAGGAAGTTTATCCTGATCTGGCTGTAATAAC i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 3723 373 + 48813 CAAAAGCTTAAATCATTTTATATGTTTTAAAACAAAGTGCATGGCATTTAAATACCTATTCCTTAAAATTTGG----AAGGTTAACACCATACAAACCCAGAGCCTGTATTTTTAGATTAGTAGCATGTAGACATTTTCAATTTCTTCTAAAGTTGGAAAAAATAAGCATTTTGTATTCATAGAATTCTTGATAACAGAAGGTAAATACTTAA-CTTTCACTTAAAAGAAATTTGGTTACATCGGAAGGAAATTTGGCTAATATAAGTTAGACACATTTCTAATTAAAACAA-AATTTAAGATAAATAATGCTCAAAGAACAGTGGTCATTGCATTTATTCCAGAGAGAGGAAGTTTATCCTGATCTGGCTGTAATAAT i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=353241.000000 s hg38.chr9_KI270719v1_random 113313 211 + 176845 GTAGTAGGTAGAACTGCTGGCGTGGACACCCAAGCAAGGAAGGAAAGCTGGTGTCTCAAGGGGTCCCACTGAGATGGAAAGGGGTCAGGGCCCAGACTGTTGATGTCACCTGGACCCAACCACCACATCTTGGAAGAAGAAATGACCCTCCCTTCCTGGTGTTGCCCCAAACAAGGAGCTTAGCAGTGTTGCACACAGGATAGTCCTTGCA s panPan2.chr2B 132582683 211 + 247869975 ATAGTAGGTAGAACTGCTGGCGTGGACACCCAAGCAAGGACGGGAAGCTGGTGTCTCAAGGGGTCTCGCTGAGATAGAAAGGGGTCAGGGCCAAGACTGTTGATGTCGCCTGGACCCAACCACCATGTCTCAGAAGAAGAAATGACCCTCCCCTCCTGGTGCTGCCCCAAACAAGGAGCTTAGCACTGTTGCACACAGGATAGTCCTTGCA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 82917 211 + 95358 GTAGTAGGTAGAACTGCTGGCGTGGACACCCAAGCAAGGAAGGGAAGCTGGTGTCTCAAGGGGTCCCGCTGAGATGGAAAGGGGTCAGGGCCCAGACTGTTGATGTCGCCTGGACCCAACCACCACGTCTCAGAAGAAGAAATGACCCTCCCCTCCTGGTGCCGCCCCAAACAAGGAGCTTAGCAGTGTTGCACACAGGATAGTCCTTGCA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 283635 209 + 1485088 GTAGTAGGTAGAACTGCTGGCGTGGACACCCAAGCAAGGAAGGG-AGCTGGTTTCTCAAGGGGTCCCGCTGAGATGGAAAGGGGTCAGGGCCCAGACCATTGATGTCACCTGGACCCAACCACCATGTCTCAGAAGAA-AAATGACCCTCCGCTCCTGGTGTTGCCCCAAACAAGGAGCTTAGCAGTGTTGCACACAGGATAGTCCTTGCA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 4949 209 - 98917 GTAGTAGGTAGAACTGCTGGTGTGGACACCCAAGCAAGGAAGGGAAGCTAGTGTCTCAAGGGGTCACACTGAGACGGAAAGGGGTCAGGGCCCAGAC--TTGATGTCACCTGGAGTCAACCACCATGCCTCAGAAGAAGAAGTGATCTTCCCCTCCTGGTGCTGAGCCAAACCAGGAGCTTGGCAGTGTTGCACACAGGATAGTCCTTGCT i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 33382 209 + 85383 GTAGTAGGCAGAACTGCTGGCGTGGATACCCAAGCAAGGAAGAGAAGTTAGTGTCTCAAGGGGTCACACTAAGATGGAAAGGGGTCAGGGCCCAGAC--TTGATGTCACCTGGACTCGACCACCATGTCTCAGAAGAAGAAATGATCTTCCCCTCCTGGTGTTGAGCCAAATCAGGAGCTTGGCAGTGCTGCACACAGGATAGTCCTTGCT i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 4096 208 + 48813 GTAATAGGTAGAACTGCTGGTGTGGACACCCAAGCAAGGAAGGGAAGCTAGTGTCTCAAGGGGTCACACTGAGACGGAAAGGGCTCAGGGCCCAGACTGTTGACGTCACCTGGACTCAACCACCATGTCTCAGAAGAAG---TGATCTTCCCCTCCTGGTGCTGAGCCAAACCAGGAGCTTGGCAGTGTTGCACACAGGATAGTCCTTGCT i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 9225 11886 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=25886.000000 s hg38.chr9_KI270719v1_random 113524 10 + 176845 GGAGACATGT s panPan2.chr2B 132582894 10 + 247869975 GGAGACATGT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 83128 10 + 95358 GGAGACATGT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 283844 10 + 1485088 GGAGACATGT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 5158 10 - 98917 GGAGACATGT i cerAty1.NW_012004463v1 C 0 I 10 s chlSab2.chrUn_KE147573v1 33591 10 + 85383 GGAGACACGT i chlSab2.chrUn_KE147573v1 C 0 I 10 s manLeu1.NW_012101734v1 4304 10 + 48813 GGAGACATGT i manLeu1.NW_012101734v1 C 0 I 10 s rhiRox1.KN298119v1 21111 10 - 60063 GGAGACATGT i rhiRox1.KN298119v1 I 11886 I 3880 e ponAbe2.chr9 115771272 12737 - 135191526 I e panTro5.chr9 41288266 2513 + 116767853 I a score=121066.000000 s hg38.chr9_KI270719v1_random 113534 72 + 176845 TTGACAAGCTGCTGAGGTGCCTGATGGGGCCAGGCTTTTTTTCATGAAATGAGTTTGCATCCTGAGGAAGCC s panPan2.chr2B 132582904 71 + 247869975 TTGACAAGCTGCTGAGGTGCCTGATGGGGCCAGGCTCTTGT-CATGCAATGAGTTTGCATCCTGAGGAAACC i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 83138 71 + 95358 TTGACAAGTTGCTGAGGTGCCTGATGGGGCCAGGCTCTTGT-CATGAAATGAGTTTGCATCCTGAGGAAGCC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 283854 71 + 1485088 TTGACAAGTTGCTGAGGTGCCTGACGGGGCCAGGCTCTTGT-CACGAAATGAGTGTGCATCCTGAGGAAGCC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 5178 71 - 98917 TTGACAAGTTGCTGAGGTGCCTGACCAGGCCAGGCCCTTGT-CATGAAATGAGTTTGCATCCGGAGGAAGGC i cerAty1.NW_012004463v1 I 10 C 0 s chlSab2.chrUn_KE147573v1 33611 71 + 85383 TTGACAAGTTGCTGAGGTGCCTGACCGGGCCAGGCCCTTGT-CATGAAATGAGTTTGCAACCTGAGGAAGCC i chlSab2.chrUn_KE147573v1 I 10 C 0 s manLeu1.NW_012101734v1 4324 71 + 48813 TTGACAAGTTGCTGAAGTGCCTGACCGGGCCAGGCCCTTGT-CATGAAATGAGTTTGCATCCTGAAGAAGCC i manLeu1.NW_012101734v1 I 10 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=-216.000000 s hg38.chr9_KI270719v1_random 113606 2 + 176845 TC- s panPan2.chr2B 132582975 2 + 247869975 TT- i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 83209 2 + 95358 TC- i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 283925 2 + 1485088 TT- i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 5249 2 - 98917 TT- i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 33682 2 + 85383 TT- i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 4395 2 + 48813 TT- i manLeu1.NW_012101734v1 C 0 C 0 s tarSyr2.KE931519v1 8023 2 + 137775 -TA i tarSyr2.KE931519v1 N 0 N 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=1284930.000000 s hg38.chr9_KI270719v1_random 113608 744 + 176845 TTTATTGGAAACCTGGCAGGGATCCAATTTCCCCTTTGCCTTAACCCCGTAGGAGCATAGTAGATAGGGAGGAGGTCACCCAGGTGGCTGTTCCTGCTTGGCCCCCACTTCCCAGACCATTCCAGGCAGGGAGAGCCGCTGAGATCACTCCATGGGCTGCTCACATGGGGTCTGGACCCAGCCGCCCTCCTGTGCCTGGCAGGCAGCCCCTGGGCCATCACAGGACCCACTGTGTGGTGATCAGTGGCCCACCACCTGCCCTTGTGGTGGGTGCGGTTCACAGGTGCTGCCCCAGTCCTGGCACACTGGCCTTCCCAGCCTGGCCCAGGATAGGGGATGTGAATGATCCTTGCCTGTGCCCCTTCAGACCATGTGAGGTTGGACACTCACTGCAGAAGTCCCTCCAGGTCCCTTTTCAACTGAGTTGTGGGGGACTTGCTTAGTCCTCATGCCCAGGGTCAGGGGAGGGGTGCAGAGTCTGCACCCTAAATCCCCTAGGGCCTGAGGGAGGTCTCCCAGGTTATCTCTGTCCTCTCCAGTGACATGAGTCCTCCCAGATGGCCTCAGCCCTCTCAGGTGACTTGCTTCCATGGTGACTCTGGCTCTTGCAGGAGGTGGGCTACTACAGGGACATGAGCTGCCTAACTGCCATCCTCCTC--CTGTATCTGCCAGAGGAAGACACCTTCTGGGGACTGAATCAGCTGATGGCTGAGGAGAGGCACTCCCTGCAAGGTAGGCGGACAG s panPan2.chr2B 132582977 744 + 247869975 TTCATTGGAAACCTGGCAGGGATCCAATTTCCCTTTTGCCTTAACCCCGTAGGAGCACAGTAGACAGGGAGGAGATCACCCAGGTGGCTGTTCCTGCTTGGCACCCACTTCCCAGACCATTCCAGGCACGGAGAGCCACTGAGCTCACTCCATGGGCTGCCCACATGGGGTCTGGACCCAGCCGCCCTCCTGTGCCTGGCAGGCAGCCCCTGGGCCATCAGAGGACCCATTGTGTGGTGATCAGTGGCCCATCGCCTGCCCTTGTGGTGGGTGCAGTTCACAGGTGCTGCCCTAGGCCTGGCACAGTGGCCTTCTCAGCCTGTCCCAGGATAGGGGACATGAATGATCCTTGCCTGTGCCCCTTCGGACTACGTGAGTTTGGACACTCACTGCAGAAGTCCCTCCAGGTCCCTTTTCAACTGAGTTGTGGGGGACTTGCTTAGTCCTCATGCCCAGGGTCAGGGGAGGGGTGCAGAGTCTGCACCCTAAATCCGCTAGGGCCAGAGGGAGGTCTCCCAGGTGACCTCTGTCCTCTCCAGTGACATGAGTCCTCCCAGATGGCCTCAGCCCTCTCAGGTGACATGCTTCCATGGTGACTCTGGCTCTTGCAGGAGGTGGGCTAGCACAGGGACATGAGCTGCCTAACTGCCATCCTCCTC--GTGTATCTGCCAGAGGAAGACACCTTCTGGGCACTGGATCAGCTGATGGCTGAGGAGAGGCACTCCCTGCAGGGTAGGCGGACAG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 83211 744 + 95358 TTTATTGGAAACCTGGCAGGGATCCAATTTCCCCTTTGCCTTAACCCCATAGGAGCACAGTAGACAGGGAGGAGGTCACCCAGGTGGCTGTTCCTGCTTGGCCCCCACTTCCCAGACCCTTCCAGGAAGGGAGAGCCGCTGAGATCACTCCATGGGCTGCCCACATGGGGTCTGGACCCAGCCGCCCTCCTGTGCCTGGCAGGCAGCCCCTGGGCCATCACAAGACCCACTGTGTGGTGATCAGTGGCCCACCACCTGCCCTTGAGGTGGGTGCAGTTCACAGGTGCTGCCCCAGTCCTGGCACACTGGCCTTGCCAGCCTGGCCCAGGATAGGGGATGTGAATGATCCTTGCCTGTGCCCCTTCAGACCATGTGAGGTTGGACACTCACTGCAGAAGTCCCTCCAGGTCCCTTTTCAACTGAGTTGTGGGGGACTTGCTTAGTCCTCATGCCCAGGGTCAGGGGAGGGGTGAAGAGTCTGCAACCTAAATCCCCTAGGGCCTGAGGGAGGTCTCCCAGGTGACCTCTGTCCTCTCCAGTGACATGAGTCCTCCCAGATGGCCTCAGCCCTCTCAGGTGACTTGCTTCCATGGTGACTCTGGCTCTTGCAGGAGGTGGGCTAACACAGGGACATGAGCTGCCTAACTGCCATCCTCCTC--TTGTATCTGCCAGAGGAAGACACTTTCTGGGCACTGGATCAGCTGATGGCTGAGGAGAGGCACTCCCTGCAGGGTAGGTGGACAG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 283927 739 + 1485088 TTTATTGGAAACCTGGCAGGGATCCAATTTCCCCTTTGCCTTAACCCCA---GAGCACAGTAGACACGGAGGAAGTCACTCAGGTGGCTGTTCCTCCTTGGCTCCCACTTCCCAGACCATTCCAGGCAGGGAGAGCTGCTGAGATCACTCCACGGGCTGCTCACATGGGGTCTGGACCCAGCCACCCTCCTGTGCCTGGCAGGCAGCCCCTGGGCCATCACAGGACCCATTGTGTGGTGATCAGTGGCCCACCGCCTGCCCTTGTGGTGGGTGCAGTTCACCCGTGCTGCCCCAGGCCTGGCACACTGGTCTTCCCAGCCTGGCCCAGGATAGGGGACATGAATGATCCTTGCTTGTGCCCCTTCGGACCATGTGAGTTTGGACACTCACTGCAGAAGCCCCTCCGGGTCCCTTTTCAACTGAGTTGTGGGGGACTTGCTTAGTCCTCATGCCCAGGGTT-GGGGAGGAGTGCAGAGTCTGCACCCTAAATCCCCTAGGTCCTGAGGGAGGTCTCCCAGGTGA-CTCTGTCGTCTTCAGTGACATGAGTCCTCCCAGATGGCCTCAGCCCTCTCAGGTGACATGCTTCCATGGTGACTCTGGCTCTTGCAGGAGGCGGGCTACCACATCAACATGACCTGCCTAACTGCCATCCTCCTC--CTGCATCTGCCAGAGGAAGACACCTTCTGGGCACTGGATCAGCTGATGGCTGAGGAGAGGCACTCCCTGCAGGGTAGGTGGACAG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 5251 742 - 98917 TTTATTGGAAACCTGACAGGGATCCAATTTCCCCTTTGCCTTAACCCCACAGGAGCACAGTAGACAGGGAGGAGGTCATTCAGGTGGCTGCTCCTGCTTGGCCCCCACTTCCCAGACCATTCCAGGCAGGGAGAGCCACTGAGCTGACTCCATGGGCTGCCCACATGGGGTCTGGACCCAGCCACCCTCCTGTGCCTGGCAGGTAGCCCCT-GGCCATCACAGGACCCATTATGTGGTGATCAGTAGCCGACCGCCTGCCCTTGTGGCAGGTGCAGTTCACAGGTGCTGCCCCAGGCCTGTCACAGTGGCCTTCCCAGCCTGGCACAGGAGAGGAGGCATGAATGATCCTTTCCTGTACCCATTCAGGCCATGTGAGTTTGGACACTAACTACAGAACTCCCTCCAGGCCCCTTGTCAACTGAATTGTATGTGACTTGCTTAGTCCTCATGCCCAGGGTCAGAGGAGGGGTGCAGAGTCTGCACCCTAAATCCCCTAAGGCCTGAAGGCAGTCTCCCAGATGACCTCTGTCCTTTCCAGTGACATGAG-CCTCCCGCATGGCCTCAGCTCTCTCAGGTGACATCCTTCCATGGTGACTCTGGCTCTTGCAGGAGGTGGGCTACCACAGGGACATGAGCTGTCTAACTGCCATCCTCCTC--CTGTATCTGCTGGATGAAGACACCTTCTGGGCACTGGATCAGCTGCTGGCCGAGGAGAGGCACTCCCTGCAGGGTAGGTGGTCAG i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 33684 745 + 85383 TTTATTGGAAACCTGACAGGGATCCAATTTCCCCTTTGCCTTAACCTCACAGGAGCACAGTAGACAGGGAGGGGGTCATCCAGGTGGCTGCTCCTGCTTGGACCCCACTTCCCAGACCATTCCAGGCAGGGAGAGCCACTGAGCCGACTCCATGGGCTGCCCACATGGGGTCTGGACCCAGCCACCCTCCTGTGCCTGACAGGTAGCCCCTGGGCCATGACAGGACCCATTGTGTGGTGATCAGTGGCCCACCGCCTGCCCTTGTGGCAGGTGCAGTTCACAGGTGCTGCCCCAGGCCTGGCACAGTGGCCTTCCCAGCCTGGCACAGGAGACTAGGCACGAATGATCCTTTCCTGTGCCCATTCAGGCCATGTGAGTTTGGACACTCACTACAGAACTCCCTCCAGGCCCCTTGTCAACTGAATTGTGTGTGACTTGCTTAGTCCTCATGCCCAGGGTCAGGGGAGGGGTGCAGAGTCTGCACCCTAAATCCCCTAAGGCCTGAAGGCAGTCTCCCAGATGACCGCTGTCCTCTCCAGTGACATGGG-CCTCCCACATGGCCTCAGCTCTCTCAGGTGACATCCTTCCATGGTGACTCTGGCTCTTGCAGGAGGTGGGCTACCACAGGGACATGAGCTGTCTAACTGCCATCCTTCTCCTCTGTATCTGCCGGATGAAGACACCTTCTGGGCACTGGATCAGCTGCTGGCCAAGGAGAGGCACTCCCTGCGGGGTAGGTGGTCAG i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 4397 742 + 48813 TTTATTGGAAACCTGACAGGGATCCAATTTCCCCTTTGTCTTAACCCCACAGGAGCACAGTAGACAGGGAGGAGGTCATCCAGGTGGCTGCTCCTGCTTGGCCCCCACTTCCCAGACCATTCCAGGCAGGGAGAGCCACTGAGCTAACTCCATGGGCTGCCCACATGGGGTCTGGACCCAGCCACCCTCCTGTGCCTGGCAGGTAGCCCTTGGGCCATCACAGGACCCACTGTGTGGTGATCAGTGGCCCACCACCTGCGCTCGTGGCAGGTGCAGTTCACAGGTGCTGCCCCAGGCCTGGCACCGTGGCCTTCCCAGCCTGGCCCAGGAGAGTGGGCATGAATGATACTTGTCTGTGCCCCTTCGGGCCATGTGGGTTTGGACACTCACTGTAGAAGTCCCTCCAGGCCCCTTGTCAAATGAGTTATGCATGACTTGCTTAGTCCTCATGCCCCGGGTCA-GGGAGGAGTGCAGAGTCTGCACCCTAAATCCCCTAGGGTCTGAAGGTGGTCTCCCGGGAGACCTCTGTCCTCTCCAATGACATAAG-CCTCCCACATGGCCTCAGCTCTCTCAGGTGACATCCTTCCATGGTGACTCTGGCTCTTGCAGGAGGTGGGCTACCACAGGGACATGAGCTGTTTAACTGCCATCCTCCTC--CTGTATCTGCCAGATGAAGACACCTTCTGGGCACTGGATCAGCTGCTGGCTGAGGAGAGGCACTCCCTGCAGGGTAGGTGGTCAG i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=88595.000000 s hg38.chr9_KI270719v1_random 114352 68 + 176845 CTACCCCCAGGGCCTCATGCAGCCAGGCCATGGGACGGCCACCCTGGCTGGGCGATCCTGACTTCCAG s panPan2.chr2B 132583721 68 + 247869975 CTACCCCCAGGGCCTCACACAGCCAGGCCATGGGATGGCCACCCTGGCTGGGCGATCCTGACTTCCAG i panPan2.chr2B C 0 M 101 s gorGor5.CYUI01000801v1 83955 68 + 95358 CTACCCCCAGGGCCTCATGCAACCAGGCCATGGGACGGCCACCGTGGCTGGGCGATCCTGACTTCCCG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 284666 68 + 1485088 CTACCCCCAGGGCCTCACACAGCCAGGCCATGGGAAGGCCACCCTGGCTGGGCGATCCTGACTTCCAG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 5993 68 - 98917 CTGCCCCCAGGGCCTCACACAGTCAGGCCATGGGACAGCCACCCTGGCTGGGCAATCCTGACTTCCAG i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 34429 68 + 85383 CTGCCCCCAGGGCCTCACACAGTCAGGCCATGGGACAGCCACCCTGGCTGGGCAATCCTGACTTCCAG i chlSab2.chrUn_KE147573v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e manLeu1.NW_012101734v1 5139 0 + 48813 C e panTro5.chr9 41288266 2513 + 116767853 I a score=194823.000000 s hg38.chr9_KI270719v1_random 114420 236 + 176845 ACAAGGCACCTTCCTTGCTTTCCAGCTTGTTAGGAGCCTTCAGGACATCCCTGCTGAGGGTCCCACAGGGGCCCAGAGCTGAACAGGGACCCTTTCACTTCAAGGCAGACACCTTTCATTCCCAACAGCAGAGGCCGCTGCAGCCTCCCCCTGGCCACCCTGTGTGTCCCAGAGCCACAGCCCTCTAGCCCTGAGTTCATGCAGGTGACTCTCACTTCCCCAAGAGTcctcctacc s gorGor5.CYUI01000801v1 84023 236 + 95358 GCAAGGCACCTTCCTTGCTTTCCAGCTTGTTAGGAGCCTTCAGGACATCCCTGCTGAGGGGCCCACAGGAGCCTAGAGCCGAACAGGGACCCTTTCACTTCAAGGCAGACACCTTTCATCCCCAACAGCAGAGGGCACTGCAGCCTCCCCCTGGCCACCCTGTGTGTCCCAGAGCCACAGCCCTCTAGCCCTGAGTTCATGCAGGTGACTCTCACTTCCCCAAGAGTcctcctacc i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 284734 236 + 1485088 GCAAGGCACCTTCCTTGCTTTCCAGCTTGTTAGGAGCCTTCAGGGCATCCCTGCTGAGGGTTCCACAGGGGCCCAGAGCTGAACAGGAACCCTTTCACTTCAAGGCAGACACCTTTCATTCCCAACAGCAGAGGGCACTGCAGCCTCCCCCTGGCCACCCTGTGTGTCCCAGAGCCACAGCCCTCTAGCCCTGAGTTCATGTAGGTGACTGTCACTTCCCCAGGAGTCCTCCTACC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 6061 235 - 98917 GCAAGGCACCTTCCTTGTATCCCAGCTTGTTAGGAGCCTTCAGGACATCCCTGCTGAGGGT-CCACAGGAGCCCAGAGTTGAACAGGGACGCTTTCACTCCAAGGCAGACACCTTTCATCCCCAACAGCAAAGGGCACTGTGGCCTCCCCCTGGCCACCCCGTGTGTCCCAGAGCCATAGGTCTCCAGCACTGACTTCGTACAGGTGACTCTCACTTCCCCAAGAGTCCTCCTATC i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 34497 233 + 85383 GCAAGGCACCTTCCTTGTATCCCAGCTTGTTAGGAGCCTTCAGGACATCCCTGCTGAGGGT-CCACAGGAGCCCAGAGTTGAACAGGGACAC--TCACTTCAAGGCAGACACCTTTCATCCCCAACAGCAAAGGGCACTGCGGCCACCCCCTGGCCACCCCGTGTGTCCCAGAGCCATAGGTCTCCAGCACTGACTTCATACAGGTGATTGTCACTTCCCCAAGAGTCCTCCTACC i chlSab2.chrUn_KE147573v1 C 0 C 0 e panPan2.chr2B 132583789 101 + 247869975 M e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e manLeu1.NW_012101734v1 5139 0 + 48813 C e panTro5.chr9 41288266 2513 + 116767853 I a score=418311.000000 s hg38.chr9_KI270719v1_random 114656 336 + 176845 tcccagctg--------gccacactcccagctg--cccccccaGCCCACAGATGGGCCGATGAAGTCAAGATGGCAGTGTCTGCCCATCCCATGTCCCCTAGCCAGACCCCATGTCCAGGAGATGGCCATGTAGTCCCTC-GGCACCCACCCGGTTCCCTCCACTGGCCACTGCCTGCCGCAGCCCTGCCTCACAGCCTCAAAGGCAGGCCTGCCCTTCTGGCACCTTTACCCAGGATGCTGCTGTGCAGTGCCTCCAGCTAGGGCCCACCTCTCTAGAGCTGAGGCCACATGGTAGGGTCACCTGATGGAAGGGAGGAAGGCCTCAGGGTCCGGGGTCCCCTGCCA s panPan2.chr2B 132583890 335 + 247869975 TCCCAGCTG--------GCCACACTCCCAGCTG--CCATCCCAGCC-ACAGATGGGCCAATGCAGTCGAGATGGCAGTGTCTGCCCATCCCATGTCCCCCAGCCTGACCCCATGTCTAGGAGATGGCCATGTAGCCCCTT-GGCACCCTCCCCAATCCCTCCACTGGCCACTGCCTGCCGCAGCCCTGCCTCACAGCCTCAAAGGCAGGCCTGCCCTCCTGACACCTCTACCCAGGATGCTGCTGTGCAGTGCCTCCAGCTAGGGCCCACCTCCATAGAGCTGAGGCCACATGTTAGGGTCACCTGATGGAAGGGAGGAAGGCCTCAGGGTCCGGGGTCCCCTGCCA i panPan2.chr2B M 101 C 0 s gorGor5.CYUI01000801v1 84259 337 + 95358 tcccagctg--------gccacactcccagctgcccccccccaGCCCACAGATGGGCCAATGAAGTCAAGATGGCAGTGTCTGCCCATCCCATGTCCCCTAGCCAGACCCCATGTCCAGGAGATGGCCATGTAGTCCCTT-GGCACCCACCTGGTTCCCTCCACTGGCCACTGCCTGCCTCAGCCCTGCCTCACAGCCTCAAAGGCAGGCCTGCCCTCCTGGCACCTTTACCCAGGATGCTGCTGTGCAGTGCCTCCAGCTAGGGCCCATCTCCCTAGAGCTGAGGCCACATGGTAGGGTCACCTGATGGAAGGGAGGAAGGCCTCAGGGTCC-GGGTCCCCTGCCA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 284970 336 + 1485088 TCCCAGCTG--------GACACACTCCCAGCTG--CCCTCCCAGCCCACAGATGGGCCAATGAAGTTGAGATGGCAGTGTCTGCCCATCCCATTTCCCCCAGCCTGACCCCACGTCCAGGAGATGGTCATGTAGTCCCTC-GGCACCCACCCCATTCCCTCCACTGGCCACTGCCTGCCTCAGCCCTGCCTCACAGCCTCAAAGGCAGGCCTGCCCTCCCAGCACCTCTACCCAGGATGCTGCTGTGCAGTGCCTCCAGCTAGGGCCCACCTCCCTAGAGCTGAGGCCACATGGTAGGGTCACCTGATGGAAGGGAGGAAGGCCTCAGGGTCTGGGGTCCCCTGCCA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 6296 336 - 98917 TTCCAGCTG--------GCCACACACCCAGCTG--TCCTCCCAGCCCACATATGGGCCAATGAAGTTGAGATGGCAGTGTCTGCCCATCCCATGTCCCCCAGCCCCACCCCAAGTCCAGAAGATGGCCACATAGCCCCCCTGGCACCCACCCCGTTCCCTCCACTGGCCACTGCCTGCCTCTTCCCTGCCTCACAGCGTCAAAAGCAGGCCTGCCCTCCTGGCACCTCTACCCAGGATGCTGCCATGCAGTGACTCCAGCTAGGGCCCACTTCCCTAGAGCTGAGGCCACATGGTAGGGTCGCCTGATGGAAGGGAGGAAGGCCTCAGGGTCC-GGGTCCCCTGCCA i cerAty1.NW_012004463v1 C 0 C 0 s chlSab2.chrUn_KE147573v1 34730 345 + 85383 TTCCAGCTGGCCACACAGCCACACACCCAGCTG--TCCTCCCAGCCCATATATGGGCCAATGAAGTTGAGATGGCAGTGTCTGCCCATCCCATGTCCCCCAGCCCCACCCCAAGTCCAGAAGATGACCACGTAGCCCCCCTGGCACCCACCCCGTTCCCTCCACTGGCCACTGCCTGCCTCTGCCCTGCCTCACAGCCTCAAAAGCAGGCCTGCCCTCCTGGCACCTCTACCCAGGATGCTGCCGTGCAGTGCCTCCAGCTAGGGCCCACTTCCCTAGAGCTGAGGCCACATGGTAGGGTCGCCTGATGGAAGGGAGGAAGGCCTCAGGGTCTGGGGTCCCCTGCCA i chlSab2.chrUn_KE147573v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e manLeu1.NW_012101734v1 5139 0 + 48813 C e panTro5.chr9 41288266 2513 + 116767853 I a score=1845297.000000 s hg38.chr9_KI270719v1_random 114992 1106 + 176845 CTGCCCAGCTCTTCCAGCTGATGGCTCCACATCTTGGGAGTGGGCTCTGATGCATGATGGGTCAGGGGCTTCTCAGGTTTCTACAGCCCAAATACTGCCCAGCTCTGGAGGCTTCTATCCCACCAGGGACAGGTATAACACAAATCCTTCCCAAAGATCATGCGGTACCTGCTGAGTGGATGACACCCTCAACTCTTTCCCAGAGGCCCAGGGTCTCATGGGGCAGGGAAACAGGGGAAGATGGAGCTCCTCGCAGGCCTGACAAAGGGGCTGAGTCCCAAGCCAAGGCCTCACCCAAGATGAGGATTCTCCATGGGTTTGGAGTTGGGTTTCCTTTTCCTGCCCTGGAGGAGGAGGAAGAGGTACTAGGATGGGGGCTGAGCTCCAGCTGAGCAGGGTTAAGGGAAGTGTGTCCACCAGGCATCTGTGCATGGGGGAGTTGTTGGGGAAGCACTGG-------CCAGTGTTCTGCCCCAGGGCAGCTCAGGGGGCCCTGAGCACCTAG-------------GGTCCAGGAAGTGCCGTGCATTGAGGTTTGTTGAGTTGGCTCCTCTGGTGTTTTGTTGATGTGGTAAGGAGACAAATGGAGACCCCAGGACAGGGACTCTCCTGTCCCACAAGTGCCCAGCTCCCCCAGGAAGACCTGGCTCACCCCAAGTCAGCAGGAAGCACAGGAAAGTTTCTGCATGGCACAGAAGCCAGGCCCTCCTCAAGAGGGGGCATCACACAGCAGGGGTCAGGATTCAGGCCCGCTGCTATTTCCACATTATTCATTTTATAAGGtgatatggtttggctgcgttgccacccaaa---tctcatcttgaactgtaatttccataatcctcatgtgtcctgggagggacccagtgagaggtaactgaatcatggcggcagtttc-cccatgctgttctcatgatagtaagtgagttctcatgtgatctgatggttttataagcagctggcatttcccTtgcttgaggtgatgaatgccccatttaccctgatatgtttattacacattgcatgcctgtgtcaaactatctcatgtaccccataaatatatacacctaccatgtactcatataaattaaaaaTAAAAATAAAATTTTTA----A- s panPan2.chr2B 132584225 1115 + 247869975 CTTCCCAGCTCTTCCAGCTGAGGGCTCCACATCTTGGGAGTGGGCTCTGATGCCTGATGGGTCAGGGGCTTCTCAGTTTTCTACAGCCCAAATACTGCCCAGCTCCAGAGGCTCCCATCCCACCAGGAGCAGGTATAACACAAATCCTTCCCAAAGATCATGTGGTACCTGCTGAGTGGACAACACCCTCAACTCTTTCCCAGAGGCCCGGGGTCCCATGGGGCAGGGAAACAGGGAAAGATGGAGCTCCTCGAGGGTCTGAC-AAGAGACTGAGTCCC-AGCCAGGGCCTCGCCCAAGGTGAGGATTCTCCATGGGTTTGGGGTTGGGTTTTCTTTTCCTGCCCTGGAGGAGGAGGCAGAGGTACTAGGATGGGGGCTGAGCTCCAGCTGAGCAGGGTTAAAGGAAGTATGTCCACCAGGCATCTGTGCATGGGGGAGTTGTTGGGGAAGCACTGGCCACTGCCCAGTGTTCTGCCCCAGGGCAGCTCAGGGGGCCATGAGCACCTAT-------------GGCCCAGGAAGGGCCGTGCATTGAGGTTTGTTGAGTTGGCTCCTCTGGTGTTTCGTTGATGGGGTAAGGAGGCAAATGGAGACCCCAGGCCAGGGACCCTCCTGTCCCAC-AGTGCCCAGCTCCCCCAGGAGGGCCTGGCTCACCCCAAGCCCACAGGAAGCACAGGGAAATTTCTGCATGGCGCAGAAGCCAGGCTCTCCCCAAGAGGGGGCATCACACAGCAGGGGCCAAGCCTCAGGCCCAGTGCTATTTTCACATTATTCATTTTATAAGAtgatatggtttggctgtgttgccacccaaatgttgtcatcttgaactgtaatttccataagcctcatgtgtcacgggagggacccagtgagaggtaactgaatcatggcggcagtttcgcccatgctgttctcatgatagtaagtgagttctcatgtgatctgatggttttataagCATCTAGCATTTCCCTtgcttgaggtgatgaatgccccatttaccctgatgtgattattacacattgcatgcctgtgtcaaactatctcatgtaccccatgaatatatacacctactatgtactcatagaaattaaaaaTAAAAATAAA---TTTAAAATA- i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 84596 1110 + 95358 CTGCCCAGCTCTTCCAGCTGATGGCTCCACATCTTGGGAGTGGGCTCTGATGCATGATGGGTCA-GGGCTTCTCAGTTTTCTACAGCCCAAATACTGCCCAGCTCCGGAGGCTCCTATCCCACCAGGAGCAGGTATAACACAAATCCTTCCCAAAGATCATGCGGTACCTGCTGAGTGGATGACACCCTCAACTCTTTCCCAGAGGCCCAGGGTCCCATGGGGCAGGGAAACAGGGGAAGATGGAGCTCCTCGAGGGCCTGAC-AAGGGGCTGAGTCCCAAGCCAGGGCCTCACCCAAGATGAGGATTCTCCATGGGTTTGGAGTTGGGTTTCCTTTTCCTGCCCTGGAGGAGGAGGAAGAGGTACTAGGATGGGGGCTGAGCTCCAGCTGAGCAGGGTTAAGGGAAGTGTGTCC-CCAGGCATCTGTGCATGGGGGAGTTGTTGGGGAAGCACTGGCCACTGCCCAGTGTTCTGCCCCAGGGCAGCTCAGGGGGCCCTGAGCACCTAG-------------GGTCCAGGAAGTGCCGTGCATTGAGG-TTGTTGAGTTGGCTCCTCTGGTGTTTTGTTGATGGGGTAAGGAGACAAATGGAGACCCCAGGACAGGGACTCTCCTGTCCCACAAGTGCCCAGCTCCCCAAGGAGGACCTGGCTCACCCCAAGCCAGCAGGAAGCACAGGAAAGTTTCTGCATGGCACAGAAGCCAGGCCCTCCTCAAGAGGGGGCATCACACTGCAGGGGTCAGGACTCAGGCCCGCTGCTATTTCCACATTATTCATTTTATAAGGtgatatggtttggctgcgttgccacccaaa---tctcatcttgaactgtaatttccataatcctcatgtgtcatgggagtggcccagtgagaggtaactgaatcatggcggcagtttcccccatgctgttctcatgatagtaagtgagttctcatgtgatctgatggttttataagcagctggcatttcccTtgcttgaggtgatgaatgccccatttaccctgatgtgattattacacattgcatgcctgtgtcaaactatctcatgtaccccataaatatatacacctaccatgtactcatataaattaaaaaTAAAAATAAATTTTTTA----A- i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 285306 1111 + 1485088 CTGCCCAGCTCTTCCAGCTGACAGCTCCGCATCTTGGGAGTGGGCTCCGATGCATGATGGGTCAGGGGTTTCTCAGTTTTCTGCCGCCCAAATACTGCCCAGCTCCGGAGACTCCTATCCCACCAGGAGCAGGTACAACACAAATCCTCCCCAAAGATCGTGCGGTACCTGCTGAGTGGACAACACCCTCAACTCTTTCCCAGAGGCCCAGGGTCCCATGGGGCAGGGAAACAGGAGAAGATGGAGCTCTTCGAGGGGCTGAC-AAGGGGCTGAGTCCC-AGCCAGGGCCTCACCCAAGGTGGGGATTCTCCATGGGTTTGGAGTTGGGTTTGCTTTTCCTGCCCTGGAGGAGGAGGCAGAGGTACTAGGATGGGGGCTGAGCTCCAGCTGAGCAGAGTTAAGCGAAGTGTGTCCACCAGGCATCTGTGCATGGGGGAGTTGTTAGGGAAGCACTGGCCACTGCCCAGTGTTCTGCCCCAGGGCAGCTC-GGGGGCCCTGCGCACCTGT-------------GGTCCAGGAAGGGCCGTGCATTGAGGTTTGTTGAGTTGGCTCCTCTGGTGTTTCGTTGATGGGGTAGGGAGGCAAATGGAGACCCCAGGCCAGGGACCCTCCTGTCCCAC-AGTGTCCAGCTCCCCCAGGAGGACCTGGCTCACCCCAAGCCCACAGGAAGCACAGGAAAGTTTCTGCATGGCACAGAAGCCAGGCCGTCCTCAAGAGGGGGCATCACAGGGCAGGGGCCAGGACTCAGGCCCACTGCTATTTCCACATTATTCATTTTATAAGGtgatatggtttggctgtgttgccatccaaa---tctcatcgtgaaccgtaatttccataatcctcatgtgtcatggaagggacccagtgagaggtaactgaatcatggtggcagtttcccccatgctgttctcatgatagcaagtgagttctcatgtgatctgatggttttataagcatctggcatttccctttcttgaggtgatgaatgccccatttaccctgatgtgattattacacattgcatgcctgtgtcaaactatctcatgtaccccataaatatatacacgtactatgtactcatataaattaaaaaTAAAAATAAA---TTTAAAATA- i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 6632 1107 - 98917 CTGCCCAGTCCTTCCAGCTAATGGCTCCACACCTTGGGAGTGGGCTCCGATGCATGATGGGTCGGGGGCTTCTCAGTATTCTACAGCCCCAATACTGCCCAGCTCCGGAGGCTCCTATCCCACCAGGAGCAGGTGTTACACAAATCCTTCCCAAAGATCATGCGGCACATGCTGAGTGGATGACACCTTCACCTCTTTCCCAGAGGCCCAGGGTCCCATGGGGCAGGGAAACAGGGGAAGATGGAGCTCCTCAAGGGGCTGAC-AAGAGGCTGAGTCCC-AGCCAGGGCCTCAGTCAACATGGGGATTCTCCATGGGTTTGGAGTTGGGTTTTCTTTTCCTGCCCTGGAGGAGGAGGCAGAGGTCCTGGGACGGGGGCTGAGCTCCAGCTGAGCAGGGTTAAGGGAAGTGTGTACACCAGGCATCTGTGCATGGGGAAGATGTTGGGGAAGCACTGGCCACTACCCAGTGTTCTGCCCCAGGGCAGCTCAGGGAGCCCTGAGCACCTATGCTCCTCCCTTCAGGACCAGGAAAGACCACACATTGAGGTTTGCTGAGTTGGCTCCTCTGGTGTTTCACTGATGGGGTAAGGAGGCACAGGGAGACCCCTGTCCAGGGACCCTCCTGTCCCAC-AGTGTCCAGCTCCCCCAAGAGGACCTGGCTCACCCCCAGCCCACAGGAAGCACAGGGAGGCTTCTGCATGGCACAGAAGCCAGGCCCTGCCCAAGAAGGGGCATCCCACGGCAGAGGCCAGGCCTCAGGCCCACTGCTATTTTCACAGTATTCATTTTATAAGGtgatacggtttggctgtgtcaccacccaaa---tctcatcttgaactgtaatttccataatcctca--cgtcatgggagggacccagtgagaggtaactgaatcatgg-ggcagtttcccccatgctgttctcatgat----agtgtgttctcatgagatctgatggttttaaaagCATCTGGCAATTCCCTTGCT--------tgaatgccccatttaccctgatgtgattattacacattgcatgcctgtgtcaaaatatctcatgtgccccataaatgtatacacctactatgtacccatagaaattaaaaaTAAAAATAAA---TTTA----AA i cerAty1.NW_012004463v1 C 0 I 3 s chlSab2.chrUn_KE147573v1 35075 1105 + 85383 CTGCCCAGTCCTTCCAGCTAACGGCTCCACACCTTGGGAGTGGGCT-CGATGCATGATGGGTCGGGGGCTTCTCAGTATTCTACAGCCCCAATACTGCCCAGCTCCAGAGGCTCCTATCCCACCAGGAGCAGGTATTACACAAATCCTTTCCAAAGATCATGCGGCACCTGCTGAGTGGATGACACCCTCACCTCTTTCCCAGAGGCCCAGGGTCCCATGGGGCAGGGAAACAGGGGAAGATGGAGCTCCTCAAGGGGCTGAC-AAGAGGCTGAGTCCC-AGCCAGGGCCTCAGTCAAGATGGGGATTCTCCATGGGTTTGGAGTTGGGTTTTCTTTACCTGCCCTGGAGGAGGAGGCAGAGGTCCTGGGACGGGGGCTGAGCTCCAGTTGAGCAGGGTTAAGGGAAGTGTGTACAACAGGCATCTGTGCATGGCGAAGATGTTGGGGAAGCACTGGCCACTGCCCAGTGTTCTGCCCCAGGAGAGCTCAGGGAGCCCTGAGCACCTATGCTCCTCCCTTCAGGACCAGGAAAGACCACACATTGAGGTTTGCTGAGTTGGCTCCTCTGGTGTTTCACTGATGGGGTAAGGAGGCACAGGGAGACCCCAGTCCAGGGACCCTCCTGTCCCAC-AGTTCCCAGCTCCCCCAAGAAGACCTGGCTCACCCCCAGCCCACAGGAAGCACAGGGAGGCTTCTGCATGGCACAGAAGCCAGGCCCTCCCCAAGAAGGGGCATCCCACGGCAGAGGCCAGGCCTCAGGCCCACTGCTATTTTCACATTATTCATTTTATAAGGtgatatggtttgactgtgttaccacccaaa---tctcatcttgaactgtaatttccataatcctca--tgtcatgggagggacccagtgaaaggtaactgaatcatgg-ggaagttt-ttccatgctggtctcatgat----agtgtgttctcatgagatctgatggttttaaaagcatctggcatttcccttgct--------tgaatgccccatttaccctgatgtgattattacacattgcatgcctgtgtcaaaatatcgcatgtgccccataaatgtatacgcctactatgtacccatagaaattaaaaaTAAAAATAAA---TTTA----AA i chlSab2.chrUn_KE147573v1 C 0 I 3 s manLeu1.NW_012101734v1 5139 1103 + 48813 CTGCCCAGTCCTTCCAACTGATGGCTTCACATCTTGGGAGTGGGCTCCGATGCATGATGGGTTGGGGGCTTCTCAGTATTCTACAGCCCCAATACTGCCCAGCTCCGGAGGCTCCTATCCCACCAGGAGCAGGTGTTACACAAATCCTTCCCAAAGATCATGCGGCGCCTGCTGAGTGGATGACACCCTCACCTCTTTCCCAGAGGCCCAGGGTCCCATGGGGCAGGGAAACAGGGGAAGATGGAGCTCCTCAAGGGGCTGAC-AAGAGGCTGAGTCCC-AGCCAGGGCCTCAGTCAACATGGGGATTCTCCATGGGTTTCGAGTTGGGTTTTCTTTTCCTGCCCTGGAGGAGGAGGCAGAGGTACTGGGACGGGGGCCGAGCTCCAGCTGAGCAGGGTTAAGGGAAGTGTGTCCACCAGGAGTCTGTGCATGGGGGAGTTGTTAGGGAAGCACTGGCCACTGCTCAGCGTTCTGCCCCAGGGCAGCTCAGGGGGCCCTGAGCACCTATGCTCCTCCTTTCAGGACCAGAAAGGGCCGTGCATTGAGGTTTGCTGAGTTGGCTCCTCTG--GTTTCGTTGATGGGGTAAGGAGGCACAGGGAGACTCCAGTCCAGGGACCTTCCTGTCCCAC-AGTGCCCAGCTCCCCCAAGAGGACCTGGCTCACCCCCAGCCCACAGGGAGCACAGGGAGGTATCTACATGGCACAGAAGCCAGGCCCACCTCAAGAAGGGGCATCCCACGGCAGAGGCCAGGAGTCAGGCCCACTGCTGTTTTCACAATGTTCATTTTATAAGGtgatagggtttggctgtgtcaccacccaaa---tctcatcttgaactgtaatttccataatcctcatgtgtcatgggagggacccagtgagaggtaactgaatcatgg-ggcagtttcccccatgctgttctcatgat----agtgagttctcatgagatctgatggttttaaaagcatctggcatttcccctgcttgaggtgatgaatgccccatttaccctg--------attacacattgcatgcttgtgtcaaaatatctcacgtatcccataaatatatacacctactaggtacccatagaaTT----AACAAAAATAAA---TTTT----AG i manLeu1.NW_012101734v1 C 0 I 1374 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=260261.000000 s hg38.chr9_KI270719v1_random 116098 146 + 176845 AAAAGTGTGAG-TTTTAAAGGTGAGGTTTGCCCTCCAGCGCTGGTGCCTGCCAGGTGTGACCTTCACATCATCTTTCCACATGGTCCAGGCCCCCATCTGCAGAGGCCAACAGTTCCCAGAGTGACCTTCCTCAGAAAACAGGGTCT s panPan2.chr2B 132585340 147 + 247869975 AAAAGTGTGAGTTTTTAAAGGTGAGGTTTACCCTCCAGCCCTGGTCCCTGCCAGGTGTGACCTTCACGTCATCTTTCCACATGGTCCAGGTCCCCATCTGCAGAGGCCAACAGTTCCCAGAGTGACCTTCCTCAGAAAACAGGGTCT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 85706 146 + 95358 AAAAGTGTGAG-TTTTAAAGGTGAGGTTTGCCCTCCAGCGCTGGTGCCTGCCAGGTGTGACCTTCACGTTGTCTTTCCACATGGTCCAGGCCCCCATCTGCAGAGGCCAACAGTTCCCAGAGTGACCTTCCTCAGAAAACAGGGTCT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 286417 147 + 1485088 AAAAGTGTGAGTTTTTAAAGGTGAGATTTGCCCTCCAGCGCTGGTCCCTGCCAGGTGTGACCTTCAGGTCGTCTTTCCACATGGTCCAGGCCCCCATCTGCAGAGGCCAACAGTTACCAGAGTGACCTTCCTTAGAAAACAGGGTCT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 7742 147 - 98917 AAAAGTGTGAGTTTTTAAAGGTGAGGTTTGCTCTCCAGTGCTGGTACCTGCCAGGTGTGACCTTCACGTCGTCTTTCCACAAGGTCCAGGTTCCCATCTGCAGAGGCCGACAGTTTCCAGAGTGACCTTCCTCAGAAAACAGGATCT i cerAty1.NW_012004463v1 I 3 C 0 s chlSab2.chrUn_KE147573v1 36183 147 + 85383 AAAAGTGTGAGTTTTTAAAGATGAGGTTTGCTCTCCAGTGCTGGTACCTGCCAGGTGTGACCTTCACGTCGTCTTTCCACAAGGTCCAGGTTCCCATCTGCAGAGGCCGACAGTTTCCAGAGTGACCTTCCTCAGAAAAcaggatct i chlSab2.chrUn_KE147573v1 I 3 I 13879 s manLeu1.NW_012101734v1 7616 147 + 48813 AAAAGTGTGAGTTTTTAAAGGTGAGGTTTGCTCTCCAGCGCTGGTCCCTGCCAGGTGTGACCTTCATGTCTTCTTTCCACAAGGTCTGGGCCCCCATCTGCAGAGGCCGACAGTTCCCAGAGTGACTTTCCTCAGAAAATAGGATCT i manLeu1.NW_012101734v1 I 1374 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=275981.000000 s hg38.chr9_KI270719v1_random 116244 219 + 176845 TGGAGGAGACAGTCAGAGGAGGGGGCCTCGTCCTCCCCACTGCACAGCCCCTTGTGGGGATTGG-AAGTGAGGGTCTCTGCCCACAAGTTATCAGTCACCCTAAGCTGTTTTGTGGGAGGAAGCATAGGGAATATAGGTCAGTGCTGGGACAGCGTTTCCTGATCCTGACTTGGAGAAGGTGTTAAAATCTTGACATTCCCGACACCTCCTTTGTGAGAG s panPan2.chr2B 132585487 220 + 247869975 TGGAGGAGACAGTTAGAGGAGGGGGCCTCATCCTCCCCACTGCACAGCCCCTCGTGGGGATTGGAAAGTGAGGGTCTCTGCCCACAAGTTGGCAGTCACCCTAAGCTCTTTTGTGGGAGGAAGCATAGGGAATATAGGTCAGTGTTGGGGCAGCATTTCCTGATCCTGACTTGGAGAAGGTGTTAAAATCTTGACATTCCCGACTCCTCCTTTGTGAGAG i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 85852 219 + 95358 TGGAGGAGACAGTCAGAGGAGGGGGCCTTATCCTCCCCACTGCACAGCCCCTTGTGGGAATTGG-AAGTGAGGGTCTCTGCCCACAAGTTGGCAGTCACCCTAAGCTGTTTTGTGGGAGGAAGCATAGGGAATATAGGTCAGTGCTGGGACAGCATTTCCTGATCCTGACTTGGAGAAGGTGTTAAAATCTTGACATTCCCGACTCCTCCTTTGTGAGAG i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 286564 220 + 1485088 TGGAGGAGACAGTCAGAGGAGGGGGCCTCATCCTCCCCACTGCACAGCCCCTTGTGGGGATTGGAAAGTGAGGGTCTCTGCCCGCAAGTTGGCAGTCACCCTAAGCTGTTTTGTGGGAAGAAGCATAGGGAATATAGGTCAGTGCTGGGACAGCATTTCCTGATCCTGACTTGGAGAAGGTGTTAAAATCTTGACATTCTCGACTCCTCCTTTGTGAGAG i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 7889 220 - 98917 TGGAGGAGACAGTCAGAGGAGAGGGCCTCATCCTCCCCACTGCACAGCCCCTCATGGGGATTGGAAAGTGAGGGTCTTTGACCACAAGTTGGCAGTCACCCTAAGCTGTGGTGTGGGAGGAAGCATAGGGAATATAGGCTAGTGCTGGGACAGTATTTCCTGATCCTGACTTGGAGAAGGTGTTAAAATCCCGACATTCCTGACTCCTCCTTTGTGGGAG i cerAty1.NW_012004463v1 C 0 C 0 s manLeu1.NW_012101734v1 7763 214 + 48813 TAGGGGAGACAGTCAGAGGAGGGGGCCTTGTTCTCCCCACTGCACAGCCCCTCGTAGGGATTGGAAAGTGAGGGTCT-----CCCAAG-TGGCAGTCACCCTAAGCTGTGCTGTGGGAGGAAGCATAGGGAATATAGGTCAGTGCTGGGACAGCATTTCCTGATCCTGACTTGGAGAAGGTGTTAAAATCCTGACATTCCTGACTACTCCTTTGTGGGAG i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e chlSab2.chrUn_KE147573v1 36330 13879 + 85383 I e panTro5.chr9 41288266 2513 + 116767853 I a score=1258675.000000 s hg38.chr9_KI270719v1_random 116463 769 + 176845 CCcctgtcctgcaggtctcacagggttgttgtgagggtcacctgtggtgatgggtttggaagtgctttgtgaatgacacagtgGGCCTTCCTATTCCTGTCATTGGCCTTTCGACCTTCAATACTAATTGCCTGGGGATCTCCAGGCCTCAAGGTCTAATCCTGGAAGGGTATGAGATGTCCCTAGTGGAATATTCTACACCTCCTGGGAGGTCTCTCACTT-CAACCTTCACCTGACATAACCCCTGCTCCTGTTCCCTCAACCTGGAGAGCTTG-CCCAG--GAGCACATGGTAGTACTGGACTGACCTCTTTGGAAAGGGTGATTACATCCTGAT----TTCAGCTCTCCC--TCCT--CCTAGCTTT-CCAC-GTAGAAATCCAGGGCTCCATGCAGCATT--TGCTGGACATGAG-GGGAAAACTTTTAGGGCAGGGATCTGCCCTGGGTGGGGACAGAGGAGTATCCTGGAGTCTGAGTGTCAGGAGTGTGAGACCTGCCCAGCTGGCCAGCCCCTGTCCCCATGCTGCTCGATGCATGA-TGTTTCCTGCACAAGC-TTTCTTTAGAGGGAAGCTTCCGGAGTGACTGCAGTGAGGTCCATGCTGTTGGGGGTGACAGAGCAGCCCTGGAGGCCCTCTGCTCTTACCCTGGCAGGAGGTGGCCAAAAAGAAGCAGGCAGAGGAAGCTTCTCCAA-CACGCTTGGAAAGAAATTTCCACATATCACTCA-CGTCACTCTTGCCACTAGAAG-GAAAATTTCTACAGTGGAGTGGAAGAAAATGAC s panPan2.chr2B 132585707 747 + 247869975 CCCAtgccctgcaggtctcacagggttgttgtgagggttacctgtggtgatgggtttggaagtgatttgtgaatgacacagtgGGCCTTCCTATTCCTGTCATTGGCTTTTCAACCTTCAATACTAATTGCCTGGGGATCTCCAGGCCTCAAGGTCTAATCCCGGAAGGGTATAAGGTGTCCCTAGTGGAGTATTCTACACCTCCTGGGAGGTCCCTCACTTCCACCCTTCACCCGACATAACCTCTGCTCTTGTTCCCTCAGCCTGGAGAGCTTG-CCCAGTAAAGCACAGGGTAGTACTGGACTGACCTCTTTGGAAAGGGTGATTACATCCTCAT----TTCAGCTCTCCC--TCTT--CCTAGCTTT-CCAC-ATAGAATTCCAGGGCTCCATGCAGCATT--TGCTGGACATGAGAGGGAAAACCTTTAGGGCAGGGATCTGCCCTGGGTGGGGACAGAGGAGTATCATGGAGTCTGGGTGTCAGGAGTGTGAGCCCTGCCCAGCTGGCCAGCCCCTGTCCCCATGCTGCTCGATGCATGA-TGTTTCCTGCACAAGC-TTCCTTTTGAGGGAAGCTTCCAGAGTGACTGCAGTGAGGTCCATGCTGTT-GGGGTGACAGAGCAGCCCT--------------------------GGAGGTGGCCAAAGAGAAGCAGGCAGAGGAAGCTCCTCCAAGCAGGCTTGGAAAGAAATTTCCGCATATCACTTA-CGTCACTCTTGCCACTAGAAG-GACAATTTTTACAGTGGAGTGGAAGAAAACGAA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 86071 770 + 95358 CCcctgccctgcaggtctcacagggttgttgtgagggtcacctgtggtgatgggtttggaagtgctttgtgaatgacacagtgGGCCTTCCTATTCCTGTCATTGGCCTTTCGACCTTCAATACTAATTGCCTGGGGAACTCCAGGCCTCAAGGTCTAATCCTGGAGGGGTATGAGATGTCCCTAGTGGAATATTCTACACCTCCTGGGAGGTCTCTCACTT-TAACCTTCACCCGACACAACCCCTGCTCCTGTTTCCTCAGCCTGGAGAGCTTG-CCCAG--GAGCACAGGGTAGTACTGGACTGACCTCTTTGGAAAGGATGATTACATCCTCAT----TTCAGCTCTCCC--TCTT--CCTAGCTTT-CCAC-GTAGAAATCCAGGGCTCCATGCAGCATT--TGCTGGACATGAGGGGGAAAACTTTTAGGGCAGGGATCTACCCTGGGTGGGGACAGAGGAGTATCCTGGAGTCTGAGTGTCAGGAGTGTGAGACCTGCCCAGCTGGCCAGCCCCTGTCCCCATGCTGCTCGATGCATGA-TGTTTCCTGCACAAGC-TTCCTTTAAAGGGAAGCTTCCGGAGTGACTGCAGTGAGTTCCATGCTGTTGGGGGTGACAGAGCAGCCCTGGAGACCCTCTGCTCTTACCCTGGCAGGAGGTGGCCAAAAAGAAGCAGGCAGAGGAAGCTTCTCCAA-CAAGCTTGGAAAGAAATTTCCGCATATCACTCA-CGTCACCCTTGCCACTAGAAG-GACAATTTCTACAGTGGAGTGGAAGAAAATGAC i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 286784 771 + 1485088 CCcctaccctgcaggtctcacagggttgttgtgagggtcacctgtggtgaggggtttggaagtgctttgtgaatgacacagtgGGCCTTCCTATTCTTGTCATTGGCCTTTCGACCTTCAATACTAATTGCCTGGGGATCTCCAGGCCTCAAGGTCTAATCCCGGAAGGATATGAGGTGTACCTAGTGGAATATTCTACACCTCCTGGGAGGTCCCTCACTT-CCACCTTCACCCAACATAACCCCTGCTCCTGTTCCGTCAGCCTGGAGAGCTTG-CCCAG--GAGCACAGGGTAGTACTGGACTGACCTCTTTGGAAAGGGTGATTACATCCTCAT----TTCAGCTCTCCC--TCTT--CCTAGCTTT-CCAC-GTAGAATTCCAGGGCTCCATGCAGCATT--TGCTGGACCTGAGAGGGAAAACTTTTAGGGCAGGGATCTGCCCTGGGTGGGGACAGAGGAGTATCCTGGAGTCTGAGTGTCAGGAGTGTGAGCCCTGCCCAGCTGGCCAGACCCTGTCCCCATGCTGCTCGATGCTTGA-TGTTTCCTGCACAAGC-TTCCTTTAGAGGGAAGCTTCCGGAATGACTGCAGTGAGGTCCATGCTGTTGGGGGTGACAGAGCAGCCCTGGAGGCCCTCTGCTCTTACCCTGGCAGGAGGTGGCCAAAAAGAAGTAGGCAGAGGAAGCTTCTCCAAGCAGGCTTGGAAAGAAATTTCCGCATATCAATCA-CGTCACTCTTGCCACTAGAAG-GACAATTTCTACGGTGGAGTGGAAGAAAATGAC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s cerAty1.NW_012004463v1 8109 773 - 98917 CCcctgccctgcagctctcacagggttgttgggagggtcacctgtggtgatgggtttggaagtgctttgcgaatgacatagtgGGCCTTCTTATTCCTGTCACTGGCCTTTTGACCTTGTATACTAATTGCCTGTAGATCTCCAGGTCTCAAGGTCTAATCCTGGAAGGGTACAAGGTGTCTTTAGTGGAACATTCTATACCTCCTGGGAGGTCCCTCACTT-CCACCTTCACCCAACATAGCTCCTGCTCCTATTCCCTCAGCCTGGAGAACTTGCCCCAG--GAGCACAGGGTGGTACTGGACTGACCTCTTTAGAAAGGGTAATTATATCCTCATTTCCTTCAGCTTCTCCCGTCTTTCCCTAGCTTGCCCACAATAGAATTCCA-GGATCCATGCAGCATATTTGCTAGAAATGAGAGGGAGAACTTCTAGATCAGGGATCTG-CCTGGGT-GGGACAGAGAAGTATCCTGGAGTCTGGGTGTCAGGAGTGTGAGCCCAG-CCAACTGTTCAGCCCCTGTCCCCATGCTGCTCAGTGCATGACTGTTTCCTGCATAAGCGCTTCTTTAGAGGGAAACTTCCAGAGTGACTGCAATAAGGTCTATGCTGTT-GGGGTGACAGAGCAGCCCTGGAGGCCCTCTGCTCTTACACTGGCAGGAGGTGGCCAAACAGAAGC--GCAGA-GAAGCT--CTCAAGCAGGCTT-GAAAGAAATTTTCGCATATCATTCATTGTCACTCTTGCCACTAGAAGAAACAA----CACAGTGGAGTGGAAGAAAATGAC i cerAty1.NW_012004463v1 C 0 N 0 s chlSab2.chrUn_KE147573v1 50209 775 + 85383 CCcctgccctgcagctctcacagggttgttgggagggtcacctgtggggatgggtttggaagtgctttgtgaatgacacagtgGGCCTTCTTATTCCTGTCACTGGCCTTTTGACTTTGAATACTAATTGCCTGTGGATCTCTAGGTCTCAAGGTCTAATCCTGGAAGGGTACAAGGTGTCTCTAGTGGAACATTCTATACCTCCTGGGAGGTCCCTCACTT-CCACCTTCACCCGACATAGCCCCTGCTCCTATTCCCTCAGCCTGGAGAACTTGCCCCAG--GAGCACAGGGTGGTACTGGACTGACCTCTTTAGAAAGGGTAATTATATCCTCAT----TTCAGCTCTCCC--TCTT-CCCTAGCTTG-CCAC-ATAGAATTCCAGGGATCCATGCAGCATATGTGCTGGAAATGAGAGGGAGAACTTCTAGGGCAGGGATCTGCCCTGGGTGGGGACAGAGAAGTATCTTGGAGTCTGGGTGTCAGAAGTGTGAGCCCAGCCCAGCTGTTCAGCCCCTGTCCCCATGCTGCTCAGTGCATGA-TGTTTCCTGCATAAGC-TTCCTTTAGAGGGAAACTTCCAGAGTGACTGCAATAAGGTCTATGCTGTTGGGGGTGACAGAGCAGCCCTGTAGGCCCTCTGCTCTTACACTGGCAGGAGGTGGCCAAACAGAAGCAGGCAGAGGAAGCTTCTCCAAGCAGGCTTGGAAAGAAATTTCCACATATCATTCA-TGTTACTCTTGCCACTAGAAG-AATAATTTTTACAGTGGAGTGGAAGAAAATGAC i chlSab2.chrUn_KE147573v1 I 13879 C 0 s manLeu1.NW_012101734v1 7977 770 + 48813 CCcccaccctgcagctctcacagggttgttgggagggtcacctgtggtgatgggtttggaagtgctttgtgaaTGACACGGTGAGCCTTCTTATTCCTGTCACTGGCCTTTCCACCTTCAATACTAATTGCCTGGGGATCTCCAGGCCTCAAGGTCTAATCCTGGAAGGGTATGAGGTGTCTGTAGTGGAACATTCTACACCTCCTGGGAGGTCCCTCACTT-CCACCTTCACCTGACATAGCCCCTGCTCCTGTTCCCTCAGCCTGGAGAGCTTG-CCCAG--GAGCACAGGGTGGTACTGGACTGACCTCTTTAGAAAGGGTGATTACATCCTCAT----TTCAACTCTCCC--TCTT--CCTAGCTTG-CCAC-ATAGAATTCTGGGGCTCCATGCAGCATA--TGCTGGAAAGGAGAGGGAGAACTTCTAGGGCAGGGATCTGCCCCAGATGGGGACAGAGGAGTGTCCTGGAGTCTGGGTGTCAGGAGTGTGAGCCCTGCCCAGGTAGCCAGCCCCAGT-CCCATGCTGCTCGGTGCATGA-TGTTTCCTGCACAAGT-TTCCTTTAGAGGGACGCTTCCAGAGTGACTGCAGTGAGGTCCATGCTGTTGGGGGTGACAGACCAGCCCTGGAGGCCCTCTGCTCTTACACTGGCAGGTGGTGGCCAAACAGAAGCAGGCAGAGGAAGCTTCTCCAAGCAGGCTTGGAAAGAAATTTCCACATATCATTCA-TGTCACTCTTGCCACTAGAAG-GACAATTTCTACAGTGGAGTGGAAGAAAACGAC i manLeu1.NW_012101734v1 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=208399.000000 s hg38.chr9_KI270719v1_random 117232 174 + 176845 TATGCTGTGAGAGAGAATGGATGCATCCAGAAGAGCAAGGCAGGA--GGGAAATGTGCCCATTGCCATAATTTTGTGTCTTTTGAAGACATTTGCCAGAATTCTACTTTTGAAGGCTGCCCCTTTTGACAGTCACTTACTGAGGAAGCTGTGGGACATTTTCAAAGCCTTTTATAT s panPan2.chr2B 132586454 176 + 247869975 TATGCTGTGGGAGAGAATGGATCCATCCAGAAGAGCAAGGCGGGAGGGGGAAATGTGCCCATTGCCAGAATTTCGTGTCTTTTGAAGACATTTGCCAGAATTCTACTTTTGAAGGCTGCCCCTTTTGATAGTCAGTTACTGAGGAACTTGTGGGATATTTTCAAAGCCTTTTATAT i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 86841 170 + 95358 TATGCTGTGGGAGAGAATGGATGCATCCGGAAGAGCAAGGTGGGA--GGGAAATGAGCCCATTGCCAGAATTCTGTGTCTTTTGAAGACATTTGCCAGAATTCTACTTTTGAAGTCTGCCCCTTTTGACAG----TTACTGAGGAAGCTGTGGGACATTTTCAAAGCCTTTTATAT i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 287555 176 + 1485088 TGTGCTGTGGGAGAGAATGGATGCATCCAGAAGAGCAAGGGGGGAGGGGGAAATGTGCCCATTGCCAGAATTTTGTGTCTTTTGAAGACATTTGCCAGAATTCTACTTTTGAAGGCTGCCCCTTTTGACAGTCAGTTACTGAGGAAGCTGCGGGACATTTTCAAAGCCTTTTATAT i nomLeu3.chrUn_GL397501_2 C 0 C 0 s chlSab2.chrUn_KE147573v1 50984 175 + 85383 TACACTGTGGGAGAGAATGGATCCATCCAGAAGAGCAAGGCGGGATGGGGAAATGTGCCCATTGCCAGAATTTTGTGTCTTTT-AAGACACTTTCCAGAATTCTACTATTGAAGGATGCCCCTTTTGACAGTCAGTTACTGAGGAAGCAGTGGGACATTTTCAAAGCCTTTTATAT i chlSab2.chrUn_KE147573v1 C 0 I 2 s manLeu1.NW_012101734v1 8747 172 + 48813 TATGCTGTGGGAGAGAATGGATCCATCCAGAAGAGCAAGGTAGGAGGGGGAAACGTGCCCATTGCCAGAATTTTGTGTCTTTTGAAGACATTTTCCAGAATTCTACTTTTGAAGGATGCCCCTTTTGA----CAGTTACTGAGGAAGTAGTGGGACATTTTCAAAGCCTTTTATAT i manLeu1.NW_012101734v1 C 0 I 2 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=3717.000000 s hg38.chr9_KI270719v1_random 117406 3 + 176845 AGA s panPan2.chr2B 132586630 3 + 247869975 TAA i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 87011 3 + 95358 AAA i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 287731 3 + 1485088 AAA i nomLeu3.chrUn_GL397501_2 C 0 C 0 s papAnu3.chrUn_NW_003936055v1 605 3 - 39427 aaa i papAnu3.chrUn_NW_003936055v1 N 0 C 0 s chlSab2.chrUn_KE147573v1 51161 3 + 85383 AAa i chlSab2.chrUn_KE147573v1 I 2 C 0 s manLeu1.NW_012101734v1 8921 3 + 48813 aaa i manLeu1.NW_012101734v1 I 2 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e rhiRox1.KN298119v1 21121 3880 - 60063 I e panTro5.chr9 41288266 2513 + 116767853 I a score=-11166.000000 s hg38.chr9_KI270719v1_random 117409 10 + 176845 ---A-----------AAAA--AAACC s panPan2.chr2B 132586633 5 + 247869975 ---A-----------AAAA------- i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 87014 6 + 95358 ---A-----------AAAA------C i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 287734 7 + 1485088 ---A-----------AAAA-----AC i nomLeu3.chrUn_GL397501_2 C 0 C 0 s papAnu3.chrUn_NW_003936055v1 608 10 - 39427 aaca-----------aaaacc----- i papAnu3.chrUn_NW_003936055v1 C 0 N 0 s chlSab2.chrUn_KE147573v1 51164 19 + 85383 cacacacactctcacacac------- i chlSab2.chrUn_KE147573v1 C 0 C 0 s manLeu1.NW_012101734v1 8924 8 + 48813 aaca-----------aaaa------- i manLeu1.NW_012101734v1 C 0 C 0 s rhiRox1.KN298119v1 25001 6 - 60063 aaca-----------aa--------- i rhiRox1.KN298119v1 I 3880 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e panTro5.chr9 41288266 2513 + 116767853 I a score=2820.000000 s hg38.chr9_KI270719v1_random 117419 4 + 176845 ACA-A s panPan2.chr2B 132586638 4 + 247869975 ACA-C i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 87020 4 + 95358 ACA-C i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 287741 4 + 1485088 ACA-C i nomLeu3.chrUn_GL397501_2 C 0 C 0 s chlSab2.chrUn_KE147573v1 51183 5 + 85383 acaca i chlSab2.chrUn_KE147573v1 C 0 I 15 s manLeu1.NW_012101734v1 8932 4 + 48813 aca-a i manLeu1.NW_012101734v1 C 0 I 15 s rhiRox1.KN298119v1 25007 4 - 60063 aca-a i rhiRox1.KN298119v1 C 0 N 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e panTro5.chr9 41288266 2513 + 116767853 I a score=283216.000000 s hg38.chr9_KI270719v1_random 117423 237 + 176845 AATATACTGCTGTGGGTCTGTGTTCAGAGACTACGAAGAGCACAGATGCCACTGTTctgtgtcgcagatgctgtgggaagtgccttaacacacagaggtttgcttcatgcaaccgggtgaggaacatctctaaaacattttacagtcaaggaaattcagtgttcaggaggttgaatgcgttatccaagatcacacatatgtcctgacagattcggggttcaaTGAAgaattatgtat s panPan2.chr2B 132586642 235 + 247869975 AACATACTGCTGTGGGTCTGTGTTCAGGGACCACGAAGAGCACAGCTGCCACTGTTCTGTGTCGCAGATGCTGTGGGAAGTGCCTTAACACACAGAGGTTTGCTTCATGCAACTGGGTGAGGAACATCTCTAAAAcagtttacagtcaagaaaattcagtgtcaaggaggttgaatgtgttatccaagatcacacatatgtcctgacagattcagggttcAGTGAAgaattatgt-- i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 87024 237 + 95358 AATATACTGCTGTGGGTCTGTGTTCAGGGACTACGAAGAACACAGCTGCCACTGTTctgtgtcgcagatgctgtgggaagtgccttaacacacagaggtttgcttcatgcaaccgggtgaggaacatctctaaaacagtttacagtcaagaaaattcagtgttcaggaggttgaatgcgttatccaagatcacacatatgtcctgacagattcggggttcaaTGAAGaattatgtat i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 287745 235 + 1485088 AATATACTGCTGTGGGTCTGTGTTCAGGGATCACGAAGAGCACAGCTGCCACTGTTctgtgtcgcagatgctatgggaagtgccttaacacacacagatgtgcttcatgcaaccgggtgaggaacatctctaaaacatttcacagtcaagaaaattcagcgttgaggaggttgaatgcattatccaagatcacacatatgtcctgacagattcggggttcaaTGAAGAACTATGT-- i nomLeu3.chrUn_GL397501_2 C 0 C 0 s chlSab2.chrUn_KE147573v1 51203 235 + 85383 aAGACAATGCTGTGGGTCTGTGTGCAGGGACCACGAAGAGCACAGCTGCCACTGTTCTGTGTCACAGATGCTACAGGAAGTGCCTTA--ACACACAGATGTGCTTCATGCAACCAGCTGAGGAACATCTCTAAAGcattttacaatcaagacaattcagtgtcaaggaggttgaatgcattatccaggatcacacatatgccctgacggaatcggggttcaaTACAGAATTATGTAT i chlSab2.chrUn_KE147573v1 I 15 N 0 s manLeu1.NW_012101734v1 8951 237 + 48813 AATACACTGCTGTGGGTCTGTGTGCAGGGATGACAAAGAGCACAGCTGCCACTGTTAtgtgtcacagattctatgggaagtgccttaacacacacagatgtgcttcatgcaacctggtgaggaacatctctaaaacattttacagttgagaaaattcagtgttgaggaggttgaatgcgttatccaagatcacacatatatcctgacagaatcagggttcaaTGCAGAATTATGTAT i manLeu1.NW_012101734v1 I 15 N 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e panTro5.chr9 41288266 2513 + 116767853 I a score=143968.000000 s hg38.chr9_KI270719v1_random 117660 326 + 176845 tttaattaagaattatgtattttgattaataattatatattttaatttcacattttaaattTCTGCAGTTTTCTTCCATCACTTTTCACCATGCTTTCTACACTTGGAATTAC-TTTTTTTGACTTCTTGATCTTCTTTACTTGTATGTTATTGATTTTCTACAAGTTTTAACATATATGATTAAAGAGTATTTCTTAATGTTTTAATAATTATCCTAGAATAAAATATATTTACTTT----GATGTATGCATTGGATATTACAGTGTATTGTGTACATTTTCAAACACTTTgtgttataccagaagcattattcaacagtggtc--attttt s panPan2.chr2B 132586877 314 + 247869975 ----atcatgaatt--------------atagggctgtattttaattttgcattttaaatttctgcagtttTCTTCCATCACTTTTCACCATGCATTCTATACTTGGAATTAC-TTTTTTAGGCTTCTTGATCTTCTTTACTTGTATGTTATTGATTTTCTACAAGTTTTAACATATATTATTAAAGAGTATTTCTTAATGTTTTAATAATTACCCTAGAATAAAATATATTTACTTTGATAGATGTATGTATTGGATATTACAGTGTATTGTGTACAttttcaaatacattgtgttataccggaagcattattcaacagtggtctttttttt i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 87261 327 + 95358 tttaattaataattatgtattttaattaataattatatattttaatttcacattttaaatttCTGCAGTTTTCTTCCATCACTTTTCACCATGCTTTCTACACTTGGAATTAC-TTTTTTTGGCTTCTTGATCTTCTTTACTTGTATGTTATTGATTTTCTACAAGTTTTAACATATATGATTAAAGAGTATTTCTTAATGTTTTAATAATTATCCTAGAATAAAATATGTTTACTTT----GATGTATGCATTGGATATTACAGTGTATTGTGTACAttttcaaacacattgtgttataccagaagcattattcaacagtggtc-ttttttt i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 287980 300 + 1485088 ----ATCATGAATT--------------ATAGGGCTGTATTTT-ATTTCACATTTTAAATTTCTGCAGTTTTCTT-------------CCATGCTTTCTACACTTGGAATTACTTTTTTTTGGCTTCTTGATCTTCTTTACTTGTATGTTATTGACTTTCTACATGTTTTAACATATATGATTAAAGAGTATTTCTTAATGTTTTAATAATTACCCTAGAATAAAATATATTTACTTTGATAGATGTATGCATTGGATATTACAGTGTATTGTGTACATTTTCAAACACATTGTGTTATGCCAGAAGCATTATTCAACAGTGGTC-TTttttt i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e panTro5.chr9 41288266 2513 + 116767853 I a score=-988.000000 s hg38.chr9_KI270719v1_random 117986 2 + 176845 --tt s panPan2.chr2B 132587191 2 + 247869975 --tt i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 87588 2 + 95358 --tt i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 288280 2 + 1485088 --tt i nomLeu3.chrUn_GL397501_2 C 0 C 0 s nasLar1.chr13 25932461 2 - 126811233 AA-- i nasLar1.chr13 N 0 N 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e panTro5.chr9 41288266 2513 + 116767853 I a score=5676.000000 s hg38.chr9_KI270719v1_random 117988 10 + 176845 acctgaacta s panPan2.chr2B 132587193 10 + 247869975 acctgaacta i panPan2.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 87590 10 + 95358 acctgaacta i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 288282 10 + 1485088 acctgaacta i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I e panTro5.chr9 41288266 2513 + 116767853 I a score=3215514.000000 s hg38.chr9_KI270719v1_random 117998 3695 + 176845 tgttcagaaaatctttccaccacagtacaaaaagatcgacttcattttgttaacagatggatgtgccatagtgcaattaactgtttaattatcctgttatcctgttgtggatatttaagttcaaacaatgcagtaataaatatgtaagagtgcttttagacattaaacaatgtggctctaaattaggaac-tagtgcctgtaatcccagcactttaggaggtcgaggtgggtggatcacctgaggtcagaagttttaagaccagcctggccaacatggcaaatccccgtttctacaaaaaatacaaaaattagctgggtatggtgatgcgcacttgtagcccctgctactcgggaggctgaggtaggacaattgcctgaacccacgaggcagaggttgcagtgagctgagatcctgtcactgcactccagtctgggggacagagtgagactctgtcccaataataaataaataaataaataa----------------------------tctagaagtacaattgcttagccaaatttcttatgcattttgaatgataagagttactgcctaatttctgttacaaaggctatggtaatttacactcAAAACACAGAATAGGTTGGTTGTTGTCACATATGGAGTCTTActgttgccgagactggagtgcagtggtgtaatcctagctcgttgtagcctccaacgcctaggctcaagcaatcctcccacctcagcctccctcccaattaactaggattacaggtgcatgccaccacacccggctaattttattcttagatatgagatcttgctatgttgcccaggctggtcttgaaatcctggcctcaaggtgacctcagcctccagtgtagctgacattacaggcgtgagacactgtacctggcTGAATGAGTGCCTCTATCCTGACACTTGTGTCCCCACGGGATCCTGCAGAATTCAGGACCCTGTCCACACAGGGGAAAACTCTCTGTTGCAGTCCTGATGACTGAGAAGGGAGCTTACCCATGGCTCTCTTGGTCATTTTTATTTAATAGTGAGCACAGAACCTCACATTTTCTGGAATGTTCCCATATGATTTtgtgagagaaaagagaatagagaccccaactccaagctcactgtgtcaaagggaaaattaagcttgggaactgagttacgcaatactgccttccttgttctcaaacacatagccataacttcacaaccctgtgtcatagcctcatccataagccaggttcccacagtgacagaaggccacatgtctcctcagatgtcctccctcacaatttgctgtgaacccctaaatctttcagaatgcacatcccacctgtaaactatccctaaaagtgagtcggctcaatttcaccctgacaatctcaattaccagcttattttcatagttctgggacaaggtcaggaccagaaatcatccctctgcctaccctgagatgaatgaatcattgagttttcctctactccactccctctattcacatgcttactttatcttatgtaaaatggagatttactgaatgtgagatgaacgca----taactgtttcctctgctccctcctttcctatgtaaaatgtagatatcctgatgctaatcagagccacacaagaatgcaagcatttgcttcactgcctaccTTCAGtctcatgggagttctctggatttcttgtatcagcatgtggacctctttagcaagattgaggacagtttcctgaattatatcctcaaaaacatttcccaagttgctcactttctcttcttctctgttagaaatgccaataagtcatccgggcacagtggctcatgccagtaatcccagcactttgggaggccaaggtgggaggatcacctgaggccagaagtttgagacctaactggccagcatggcgaaaccccatctctactaaaaatacaaaaatgagcgaggcatgctggcacacgcctgtaatctcagatacttgggaggctgaggcacgagaattgcttgaacccaggaggtggaggtttcagtgagccaagatcatgccactgcattacagactgggtaacagagtgagattctgtctcaaaaaa-agaaaattccaataagtcataga-ttttgttcctttacctaatcctacatttctcaaaagtttggttcattacttttaaattctt-tttttatttttgtctgactgggttgattcaaaggtctggtctttgagctcttaaattatttcttctatttggtctagtctgttgctaaggctgtgaactgttttttgaaattcctatagtaaatttttcaatgcaagaagctctgcttggttctttctcaaaatggctatgttgtcattcaaatccaggatcgttgttatggggttgttgttggatttcaactttctgttggattttggtgatttttttttgccacttatatcttgaatactatacctgtcatttcagacgttccattctggttaggactcattgctagattgctggtgtaatcctttggaggtgatggaacattctggctttttgtattgccagagttcttgtgatggtttcttctcatctgagagacttgatgcttcctttgttgaatttgctatcatttggaaagagttttttttttttaatttttcattctttctttctcttaagggtatgactgtggtgtatgttgtataggatcattttgcttcatttctgggtactttcagaggaccaaggctctgtacaagttccttggttgcagataggctcctgtagtggcttggtgtggtgatgtatttttgtttggtggtgtaattcaggcttcagtccagtagaaggtgcttaagagtaacagctggctgcagggtcttCTCCTCTGTGTACTTGTCCTCGACAGGTGCAGAAGTGACGAAGTGCCAAAAGCACCCTGTCCCAGTGTGTACTAGTCttcagcaggggcagagctgctggagaaacctaagaagcagcctctttcagcccacgttccttgggccccaacaggatgaccactgctggatctgcagcagtgcactaggaaggggacagagggcaagagatgaccacctctctaaatctgttcccaggctttggtgtgcccctttcagcagctgatatcgtgatcatgtttcctttgacccaaggggtggctttggcaagctgtattcctccttcccttagggctggtcctcaccaaagtttaggtctcctggggAATGGGGTTCACCTCCCTCTTGTTTCTTGGAGCTGATGGAGTACTCTCTCAACTGACcaagggagcaggctgagacacccagcaatgacacacacagaccagttccaggttgcaaagctgttcttggctgcaagtctcaccatccttgagaaacctctgctttagcaactctcttcccactacagtcctgcaagaggagagagcctaattccaacacttactgctggggcactttccacacttaacactcaattctggctgttgaggctgctcctctgctccagagcaagcactccaattcctagcccaagattaaagtgtctgcagtggccaccattgccaggcaccaaaaaatgattgactttgtatgagcccagattaaaaaggtcatccttctctcagtcccaggtctggggaaatgcctgcagcttttctgagtgtctttcctctttccccatctctcagccacttttgtgctagc s panTro5.chr9 41290779 3690 + 116767853 TGTTCAgaaaatctttccaccacagtacaaaaagatcgacttcatgttgttaacagatggatgtgccatagtgcaattaactgtttaattatcctgttatcctgttgtggatatttaagttcaaacaatgcagcaataaatatgcaagagtgcttgtagacattaaacaatgtggctctaaattagggacctagtgcctgtaatcccagcactttgggaggtcgaggtgggtggatcacctgaggtcagaagttttgagaccagcctggccaacatggcaaaaccccgtttctacaaaaaatacaaaaattagctgggtatggtgatgcacacttgtaaccccagctactcgggaggctgaggtaggacaattgcctgaacccacgaggcggaggttgcagtgagctgagatcctgtcactgcactccagtctaggggacagagtgagactctgtcccaataataaataaataaataaataa----------------------------tctagaagtacaattgtttagccaaatttcttatgcattttcaatgataagagttgctgcctaatttctgttacaaaggctatggtaatttacactcAAAACACAGAATAGGTTGGTTGTTGTCACATATGGAGTCTTActgttgccgagactggagtgcagtggtgtaatcctagctcgttgtagcctccaacgcctaggctcaaccaatcctcccacctcagcctccctcccaagtaactaggattacaggtgcatgccaccacacccggctaattttattcttagatatgggatcttgctatgttgcccaggctggtcttgaaatcctggcctcaaggtgacctcagcctccagtgtagctgacattacaggcatgagacactgtacctggcTGAATGAGTGCCTCTATCCTGACACTTGTGTCCCCACGGGATCCTGCAGAATTCAGGACCCTGTCCACAAAGGGGAAAACTCTCTGTTGAGGTCCTGATGACTGAGGAGGGAGCTTACCCATGGCTCTTCTGGTCATTCTTATTTAATAGTGAGCGCAGAACCTCACATTTTCTGGAATGTTCCCATATGATTTTGTGAGAGAaaagagaatagagaccccaaccccaagctcactgtgtcaaagggaaaattaagcttgggaactgggttatgcaatactgccttccttgttctcaaacacatagctataacatcacaaccctgtgtcatagcctcatccataagccaggttcccacagtgacagaaggctgcatgtctcctcagatgtcctccctcacaatttgctgcgaa-ccctaaatctttcagaatgcacatcccacctgtaaactatccctaaaagtgagtcggctcaatttcaccctgacaatctcaattaccagcttattttcatagttctgggacaaggtcaggaccagaaatcatccctctgcctatcctgagatgaatgaatcattgagttttcctctactccacttcctctattcatatgcttactttatcttatgtaaaatggagatttactgaatgtgagatgaacgca----taactgtttcctctgctccctcctttcctatgtaaaatgtagatatcctgatgctaatcagagccacacaggaatgcaagcatttgcttcactgcctaccTTCAGtctcacgggagttctctggatttcttgtatcagcatgtggacctctttagcaagattgaggacagtttcctgaattatatcctcaaaaacgttttccaagttgctcactttctattcttctctgttagaaatgccaataagtcagccgggcacagtggctcatgccagtaatcccagcaatttgggaggccaaggtgggaggatcacccgaggccagaagtttgagacctaactggcaagcatggcgaaaccccatctttactaaaaatacaaaaattagcgaggcatgctggcacacgcctgtaatctcagatacttgggaggctgaggcacgagaattgcttgaacccaggaggtggaggtttcagtgagccaagatcatgccactgcactacagactgggtaacagagtgagattctgtctcaaaaaa---aaaatgccaataagtcataga-ttttgttcctttacataatcctacatttctcaaaagtttggttcattatttttaaattctt-tttttatttttgtctgactggattgattcaaagatctggtctttgagctcttaaattatttcttctatttggtctagtctgttgctaaggctgcgaactgttttttgaaattcctatagtaaatttttcaatgcaagaagctctgcttggttctttctcaatatagctatgctgtcattcaaatccaggatcgttgttatggggttgttgttggatttcaactttcttttggattttggtga-ttttttttgccacttatatcttgaatactatacctgtcatttcagatgttccattctggttaggactcattgctagattgctggtgtaatcctttggaggtgatggaacattctgactttttgtactgccagagttcttgtgatggtttcttctcatctgagagacttgatgcttcctttgttgaatttgctatcatttggaaggag--tttttttttaaatttttcattctttctttctcttaagggtatgactgtggtgtatgttgcataggatcaatttgcttcatttctgggtactttcagaggaccaaggctctgtacaagttccttggttccagataggctcctgtggtggcttggtgtggtgatgtatttttgtttggtggtgtaattcaggcttcagtccagtagacagtgcttaagagtaacagctggCTGCAGGGTCTTCTCCTCTGTGTACTTGTCCTTGACAGGTGCAGAAGTGACAAAGTGCCAAAAGTGCCCTGTCCCAGTGTGTACTAGTCttcagcaggggcagacatgctggagaaacctaagaagcagcctctttcagcccatgttccctgggccccaacaggatgaccactgctggatctgcagcagtgcattaggaaggggacagagggcaagagatgaccacctctctaaatctgttcccaggctttggtgtgcccctttcagcagctgatatcgtgatcgtgtttcctttgacccaagtggtggctttggcaagctgtattcctccttcccttagggctggtcctcaccaaagtttaggtctcctggagAATGGGGTTCACCTCCCTCTTGTTTCTTGGAGCTGATGGAGTACTCTCTCAACTGACcaagggagcaggctgagacacccagcaatgacacacacagaccagttccaggttgcaaagctgttcttggctgcaagtctcaccatccttgacaaacctctgctttagcaactctcttcccactacagtcctgcaagacgagagagcctaattccaacacttactgctggggcactttccacactcaacactcaattctggctgttgaggctgctcccctgctccagagcaagcactccaattcctagcccaagattaaagtgtctgcagtggccaccattgccaggcaccaaaaaatgattgactttgtatgagcccagattaaaaagggcatccttctctcagtcccaggtctggggaaatgcctgcagcttttctgaatgtctttcctcttttcctatctctcagccacttttgtgctagc i panTro5.chr9 I 2513 C 0 s panPan2.chr2B 132587203 3656 + 247869975 tgttcagaaaatctttccaccacagtacaacaagatcgatttcattttgttaacagatggatgtgccatagggcaattaactgtttagttatcctgttatcctgttgtggatatttaagttcaaacaatgcagtaataaatatgcaagagtgctttcagacattaaagaatatggctctaaattagggacctagttcctgtaatcccagcactttgggaggtcgaggtgggtgcatcacctgaggtcagaag-tttgagaccagcctggccaacatggcaaaaccccgtttctacaaaaaatacaaaaattagctgggtgtggtgatgcgcacttgtagccccagctacttgggaggctgaggtaggacaattgcctgaacccacaaggcggaggctgcagtgagctgagatcatgtcactgcactccagtctgggggacagagtgagactctgtcccaataataaataaataaataaataa----------------------------tctagaagtacagttgcttagccaaattgcttatgcattttgaataatgagagttgctgcctaatttctgttacaaaggctatggtaatttacactcAAAACACAGAATAGGTTGGTTGTTGTTACagacggagtcttactgttgccgagactggagtgcagtggtgtaatcctagctcgttgtagtctccaacgcctaggctcaagcaatcctcccacctcagcctccctcccaagtaactaggattacaggtgcatgccaccacacctggctaattttatttttagatatgggatcttgctctgttgcccaggttggtctcgaaatcctggcctcaaggcgacctcagcctccagtgtagctgacattacaggcaggagacactgtacctggcTGAATGAGTGCCTCTATCCTGACACTTGTGTCCCCAAGGGATCCTGCAGAATTCAGGACCCTGTCCACACAGGGGAAAACTCTCTGTTGCGGTCCTGATGACTGAGGAGGGAGCTTACCCATGGCTCTCCTGGTCATTTTTATTTAATAGTGAGTGCAGAACCTCACA-TTTCTGGAATGTTCCCATATGATTTtgtgagagaaaagagaatagaga-cccaaccccgagcacactgtgtcaaagggaaaaataagcttgggaactgagttacacaatactgccttccttgttctcaaacacatagctataacttcacaaccctgtgtcatagcctcatccataagccaggttcccacagtgacagaaggctgcatgtctcctcagatgtcctccctcacaatttgctgtgagcccctaaatctttcagaatgcacatcccacctataaactagccctaaaagtgagtcggctcaatttcaccctgacagtctcaattaccaggttattttcatagttctgggacaaggtcaggaccagaaatcatccctctgcctatcctgagatgaatgaatcattgacttttcctctattccactccctctattcacatgcttactttatcttatgtaaaatgaagatttactgaatgcgagatgaacacataattaactgtttcctctgctccttcctttcctatgtaaaatgtagatatcctgatgctaatcagagccacacaagaatgcaaacatatgcttcactgcctaccTTCAGtctcacgggagttctctggatttcttgtatcagctggtggacctctctagcaagattgaggacactttcctgaattatatcctcaaaaatgttttccaagttgcttacattctcttcttctctgttagaaatgccaata-----------------------------------cagcactttgggaggccaaggtgggagtatcactcgaggccagaagtttgagacctacctggccagcatggcgaaaccccatctctactaaaaatacaaaaattagccagacatggtggcacatgcctgtgatctcagatacttgggaggttgaggcacgagaattgcttgaacccaggaggtggaggtttcagtgagccaagatcatgccactgcactacagactgggtaacagagtgagattctgtctcaaaaaa---aaaatgccaataagtcataga-ttttgttcctttacataatcctatatttctcaaaagtttggttcattatttttaaattcttctttttatttttgtctgactgggttgattcgaaggtctggtctttgagctcttaaattattttttctatttggtctagtctgttgctaaggctgccaactgttttttgaaattcctatagtaaatttttcaattcaagaagctctgcttggttctttctcaatatagctatgttgtcattcaaatccaggatcgttgttatggggttgttgttgga-ttcaactttctgttggattttggtga-atttttttgccacttatatcttgaatactatacctgtcatttcagacatttcattctggttaggactcattgctaggttgctggtgtaatcctctggaggtgatggaacattctggctttttgtattgccagagttcttgtgctggtttcttctcatctgagagacttgatgcttcttttgttgaatttgatatcatttggaaggag-gtttttttttaaatttttcattctttctttctcttaagggtgtgactgtggtgtatgttctataggatcaatttgcttcatttctgggtactttcagaggaccaaggctctgtacaagttccttggttgcagataggctcctgtggtggcttgatgtggtgatgtatttttgtttggtggtgtaattcaggcttcagtacagtagacagtgcttaagagtaacagctggctgcagggtcttatcctctgtgtacttgtcctcgacaggtgcagAAGTGACAAAGTGCCAAAAGTGCCCTGTCCCTATGTGTACTAGTCttcagcaggggcagag-tcctggagaaacctaagaagcagcctctttcagctcacgttccttgggccccaacagggtgaccactactgggtctgcagcagtgcactaggaaggggacagagggcaagagatgaccacctctctaaatctgttcccaggctttggtgtg-ccctttcagcagctgatgtcatgatcgtgtttcctttgacccaaggggtgggtttggcaagctgtattcctccttcccttagggctggtcctcaccaaagtttaggtctcctggggAATGGGGTTCACCTCCCACCTGTTTCTtggagctgatggggtactctctccactgaccaagggagcaggctgggacacccagcaatgacacacacagaccagttccaggttgcaaagctgttcttggctgcaagtctcaccatccttgagaaacctctgctttagcaactctcttcccactacagtcctgcaagaggagagagcctaattccaacacctactgctggggcactttccacactcaacactcaattctggctgtggaggctgcttccctgctccagagcaagcacttcaattcctagcccaagattaaagtgtctgcagtggccaccattgccaggcaccaaagaatgattgactttgtatgagcccagattaaaaatggcatccttcgctcagtcccaggtctggggaaatgcctgcagcttttctgagtgtctttcctctttccccatctctcagccactTTTGTGCTAGC i panPan2.chr2B C 0 N 0 s gorGor5.CYUI01000801v1 87600 3688 + 95358 tgttcagaaaatctttccaccacagtacaaaaagatcgacttcattttgttaacagttggatgtgccatagtgcagttaactgtttaattatcctgttatcctgttgtggatatttaagttcaaacaatgcagtaataaatatgcaagagtggttttagacattaagcaatatggctctaaattagggacctagtacctgtaatcccagcactttgggaggtcgaggtgggtggatcacctgaggtcagaag-tttgagaccagcgtggccaacatggcaaaaccccgtttctacaaaaaatacaaaaattagctgggtatggtgatgcgcacttgtagccccagctacttgggaggctgaggtaggacaattgcctgaacccacgaggcggaggctgcagtgagctgagatcatgtcactgcactccagtctcggggacagagtgagattctgtcccaat----aataaataaataaataa----------------------------tctagaagtacaattgcttagccaaatttcttatgcattttgaatgataagagttgctgcctaatttctgttacaaaggctatggtaatttacactcAAAACACAGAATAGGTTGGTTGTTGTTACATATGGAGTCTTActgttgctgagactggagtgcagtggtgtaatcttagctcgttgtagcctccaatgcctaggctcaagcaatcctcccacctcagcctccctcccaagtaactaggattacaggtgcatgccaccacacccagctaattttattcttagatatgggatcttgctatgttgcccaggctggtcttgaaatcctcgcctcaaggtgacctcagcctccagtgtagctgacattacaggtgtgagacactgtacctggcTGAATGAGTGCCTCTATCCTGACACTTGTGTCCCCACGGGATCCTGCAGAATTCAGGACCCTGTCCACACAGGGGAAAACTCTCCGTTGGGGTCCTGATGACTGAGGAAGGAGCTTACCCATGGCTCTCCTGGTCATTTTTATTTAATAGTGAGCACAAAACCTCACATTTTCTGGAATGTTCCCATATGATTTtgtgagagaaaagagaatagagaccccaaccccgagctcactgtgtcaaagggaaaattaagcttgggaactgagttacgcaatactgccttccttgttctcaaacacatagctataacttc-caaccctgtgtcatagcctcatccataagccaggttcccacagtgacagaaggccgcatgtctcctcagatgtcctccctcacaatttgctgtgagcccctaaatcttttagaatgcacatcccacctgtaaactatccctaaaagtgagtcggctcaatttcaccctgacaatctcaattaccagcttattttcatagttctgggacaaggtcaggaccagaaatcatccctctgcctatcctgagatgaatgaatcattgagttttcctctactccactccctctattcacatgcttactttatcttatgtaaaatggagatttactgaatgcgaggtgaacgca----taactgtttcctctgctcccttctttcctatgtaaaatgtagatatcctgatgctaatcagagccacacaagaatgcaagcatttgcttcactgcctaccTTCAGTCTCAGGggagttctctggatttcttgtatcagcatgtggacctctttagcaagattgaggacagtttcctgaattatatcctcaaaaacgttttccaagttgctcactttctcttcttctctgttagaaatgccaataagtcagccgggcacagtggctcatgccagtaatcccagcactttgggaggccaaggtgggaggatcacccgaggccagaagtttgagacctaactggccagcatggcgaaaccccatctctactaaaaatacaaaaattagcgaggcatgctggcacacacctgtaatctcagatacttgggaggctgaggcacgagaattgcttgaacccaggaggtggaggtttcagtgagccaagatcatgccactgcactacagactgggtaacagagcgagattctgtctcaaaaaaaaaaaaatgccaataagtcataga-ttttgttcctttacataatcctacatttctcaaaagtttggttcattatttttaaattctt-tttttatttttgtctgactgggttgattcaaaggtctggtctttgagctcttcaattatttcttctatttggtctagtctgttgctaaggctgcgaactgttttttgaaattcctatagtaaatttttcaatgcaaggagctctgcttggttctttctcaatatggctatgttgtcattcaaatccaggatcgttgttatggggttgttgttgga-ttcaactttctgttggattttggtga-ttttttttgccacttatatcttgaatactatacctgtcatttcagacgttccattctggttaggactcattgctagattgctggtgtaatcctttggaggtgatggaacattctgg-tttttgtattgccagagttcttgtgctggtttcttctcatctgagagacttgatgcttattttgttgaatttgctatcatttggaaggagttttttttttttaatttttcattctttctttctcttaagggtatgactgtgatgtatgttgtataggatcagtttgattcatttctgggtactttcagaggaccaaggctctgtacaagttccttggttgcagataggctcctgtggtggcttggtgtggtgatgtatttttgtttggtggtgtaattcaggcttcagtccagtagacagtgcttaagagtaacagctggctgcagggtcttctcctctgtgtacttgtcctcgacaggtgcagAAGTGACAAAGTGCCAAAAGCACCCTGTCCCAATGTGTACTAGTCttcagcagaggcagagctgctggagaaacctaagaagcagcctctttcagcccacgttccttgggccccaacaggatgaccactgctggatctgcagcagtgcactaggaaggggacagagggcaagagatgaccacctctctaaatctgttcccaggctttggtgtgccgctttcagcagctgatatcatgacagtgtttcctttgacccaaggggtgggtttggcaagctgtattcctccttcccttagggctggtcctcaccaaagtttagctctcttggggAATGGGGCTCACCTCCCTCTTGTTTCTTGGAGCTGATGGAGTATTCTCTCAACTGACcaagggagcaggctgagacacccagcaatgacacacacagaccagttccaggttgcaaagatgttcttggctgcgagtctcaccatccttgagaaacctttgctttagcaactctcttcccactacagtcctgcaagaggagagagcctaattccaacacctactgctggggcactttccacactcaacactcaattctggctgtggaggctgctcccctgctccagagcaagcactccaattcctagcccaagattaaagtgtctgcagtggccaccattgccaggcaccaaaaaatgattgactttgtatgagcccagattaaaaaggacattcttatctcagtcccaggtctggggaaatgcctgcagcttttctgagtgtctttcctctttccccatctctcagccacttttgtgctagc i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 288292 3714 + 1485088 tgttcagaaaatctttccaccacagtacaaaaagatcgatttcattttgttaacagatggatgtgccatagtgcaattaactgtttaattatcctgttatcctgttgtggatatttaagttcaaacaatgcagtaataaatatgcaagagtgcttttagacattaaagaatatggctctaaattagggacctagtgcctgtaatcccagcactttgggaggtcgaggtgggtggatcacctgaggtcagaag-tttgagaccagcctggccaacgtggcaaaaccccgtttctgtaaaaaatacaaaaattagctgggtatggtgatgcacacttgtagcgccagctactcgggaggctgaggtaggacaatcgcctgaacccacgaggcagaggttgcagtgagctgagatcatatcactgcactccagtccgggggacagagtgagattctgtcccaaTaataaataaataaataaataaataaataaataaataaataaataatcactctagaagtacaattgtttagccaaattgcttatgcattttgaatgataagagttgctgcctaatttctgttacaaaggctatggtaatttacactcAGAACACAGAATTGGTTGGttgtttttacatacggagtcttactgctgccgagaatggagtgcagtggtgtaatcctagctc---gtagcctccaacccctatgctcaagcaatcctcccacctcagcctccctcccaagtaactaggattacaggtgcattccaccacacctggctaattttatttttagatatgggatcttgctatgttgcccaggcaggtcttgaaatcctggcctcaaggcaacctcagcctccagtgtagctgacattacaggtgtcagacactgtgcctggcTGAATGAGTGCCTCTATCCTGACACTCGTGTCCCCACGGGATCCTGCAGAATTCAGGCCCCTGTCCACACAGGGGAAAGCTCTCTGTTGCAGTCCTGATGACTGAGGAGGGAGCTTACCCATGGCTCTCCTGGTCATTTTTATTTAATAGTGAGCACAGAACCTCACATTTTCTGGAATGTTCCCATATGATTTTGT--GAGAaaagagaatagagaccccaaccccaagctcactgtgtcaaagggaaaattaagcttgggaactgagttacgcaatactgccttccttgttcacaaacacatagctataacttcacaaccctgtgtcatagcctcatccataagccaggttcccacagtgacagaaggctgcgtgtctcctcagatgtcctccctcacaatttgctgtgagcccctaaatctttcagaatgcacatcccatctataatctatccctaaaagtgaattggctcaatttcaccctgacaatctcaattaccagcttattttcatagttctgggacaaggtcaggaccagaaatcatccctctgcctatcctgagatgaatgaatcattgacttttcctctactccactccctctattcacatgcttactttagcttatgtaaaatgaagatttactgaatgcgagatgaacacataattaactgtttcctctgcttcctcctgtcctatgtaaaatgtaggtatcctgatgctaatcagagccatacaagaatgcaagcatttgcttcactgcctaccTTCAGtctcatgggagttctctggatttcttgtatcagcatgtggacctccctagcaagattgaggacacttccctgaattatatcgtcaaaaatgttttccaagttgcttactttctcttcttctctgttagaaatgccaataagtcagctgggcacagtggctcatgccagtaatcccagcactttgggaggccaaggtgggaggatcacctgaggctagaagtttgagacctacctggccagcatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggcacatgcctgtaatctcagttacttgggaggctgaggcatgagaattgcttgaacccaggaggtggaggtttcagtgagccaagatcatgccactgcactacagactgggtaacagagtgagattctgtctcaaaaca------atgccaataagccatagatttttgtccctttacataatcctatatttctcaaaagtttggttcattatttttaaattctt-tttttatttttgtctgactgggttgattcaaaggtctggtctttgagctcttaaattatttcttctatttggtctagtctgttgctaaggctgc-aactgttttttgaaattcctgtagtaaatttttcaattcaagaagctctgcttggttctttctcaatatagctatgttgtcattcaaatccaggatcgttgttatggggttgttgttggatttcaactttctgtgggattttggtga-atttttttgccacttatatcttgaatactatacctgtcatttcagacatttcattctggttaggactcattgctaggttgctggtgtaacactttggaggtgatggaacattctggctttttgtattgccagagttcttgtgttggtttcttctcatctgagagacttaatgcttcttttgttgaatttgctatcatttggaaggag-gttttttttttaatttttcattctttctttctcttaagggtatgactgtggtgtatgttgtataggatcaatttgcttcatttctgggtactttcagaggaccaaggctctgtacaagttccttggttgcagataagctcctgtggtggcttggtgtggtgatgtatttttgtttggtggtgcaattcaggcttcagtccagtagacagtgcttaagagtaacagctggctgcagggtcttCTCCTCTGTGTACTTGGCCTCGACAGGTGCAGAAGTGACAAAGTGCCAAAAACACCCTGTCCCAGTGTGCACTAGTCttcagcaggggcagagctgctggagaaacctaagcagcagcctttttcagcccacgttccttggg-cccaacaggatgaccactgctgggtctgcagcagtgcactaggcaggggacagagggcaagagatgaccacctctctaaatctgttcccaggctttggtgtgcccctttcagcagctgatgtcatgatcgtgtttcctttgacccaagggatgggtttggcaagctgtattcctccttcccttagggctggtcctcaccaaagtttaggtctcctggggAATGGGGTTCACCTCCCTCCTGTTTCTTGGAGCTGATGGGATACTCTCTCAACTGACcaaaggagcaggctgggacacccagcaacgacacacacagaccacttccaggttgcaaagctgttcttggctgcaagtctcaccatccttgagaaacctctgctttagcaactctcttcccactacagtcctgcaagaggagagagcctaattccaacacctactgctggggcactttccacactcaacactcaattctggctgtggcggctgctcccctgcttcagagcaagcactccaattcctagcccaagattcaagtgtctgcagcggccaccattgccaggcaccaaacaatgattgattttgtatgagcccagattaaaaatggcatccttctctcagtcccaggtctggggaaatgcctgcagttcttctgagtgtctttgctcttttcccatctctcagccacttttgtgctagc i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I a score=96691.000000 s hg38.chr9_KI270719v1_random 121693 181 + 176845 tccaaggcttgggagaaacagagtgctctcccttaatctggattgcacagatccccagtgaaaatgtgagttgcagagggagactggctgctcttctcttgtactggagtttcactcccttttatgaaccaaatgctatcacagagtctgctttcccacctccccctccacagggtctgga s panTro5.chr9 41294469 181 + 116767853 tccaaggcttgggagaaacagagtgctctcccttaatctggattgcacagatccccagtgaaaaggtgagttgcagagggagactggctgctcttctctcgtactggagtttcactcccttttatgaaccaaatgctatcacagagtctgctttcccacctccccctccacagggtctgga i panTro5.chr9 C 0 n 0 s gorGor5.CYUI01000801v1 91288 181 + 95358 tccaaggcttgggagaaacagagtgccctcccttaatctggattgcacagatccccagtggaaaggtgagttgcagagggagactggctgctcttctctcatactggagtttcactcccttttatgaaccaaatgctatcacagaggctgctttcccacctccccctccacagggtctgga i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 292006 181 + 1485088 tccaaggcttgggagaaacagagtgctttcccttagtcttggttgcacacatccccagtagaaaggtgagtcgcagagggagactggctgcccttctctcatactggagtttcactcccttttatgaaccaaatgctgtcacagaggctgctttcccacctccccctccacagggtctgga i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I a score=1125002.000000 s hg38.chr9_KI270719v1_random 121874 2158 + 176845 gtgtttttctgtattcctgtgaattcctatttttcttcttgaattgaagctcacaaagtttatctttatgcttatttttctacttccaagtggctgaggcacactgaaagcccctaatccatcattctagg-aaaaaaGGAtggtttaaataaaggaatgttcacataaaatatatattaattagtgcaaacatattttatttgacatgagttaggtgaatctttgatacattaattaattttaaaattgttaaataaaattagaaatatcttcgaatttgccaaggtatgtttctctcctgggattactggtcagttttattttttccttggatagacatttgaagccataaaTCTTGACATAGACCTGATGTAGACCTCCATACCTTTCCCAGATGTGGGACGGAGCaactgggacaggtccatcctagcactaagggatgattaaacctaacttgtagtctttgtacaactataaacatggttgatgctttaagagaaagatcttgatggaaagggTTAAAtgtaaaaattgatcatatgaattgggtcattcttatcacaccaaataaaaccatcaacaagccagggggaggaggcattcagggcaaaaacaccactccaaaagcataattctctgcatgcctggctgctgaaattacctgctttaagctgaaaccagttttatcaaatggttactgaaacaacctcttg-aacactaagactagctttacccaccactgtccctcacctatcagagcctgccagctctcaaaaaccttactggtgccagtgaactttctcaaagagaaatacataccgtttttctctctgtctcccttttttataaaacctctaactttctctttatgttttggacatactaaagacacccattctgcatgtatgtgtgaaattgtaatacttgtatctcaaataaaacattttaatttcagatgtttgtctctatatttatttgactttgacaATCTGATATTATTTAGCATTATTTCCAGTCTCCCAAATAATGTCAAAATTTTGTTATGTTAGATAGGAATATCTTGTTATTCAACTTGAAGGTAAACTGCTTGATCAATGCATGTAATTCCTTGACAGATTGTCAGCACCTCTAAGACAACATGTAGATATTGCTCATTATTAACACATTTCATCTTTTCATGATAAATTACAAAAATTTAATTTTCATTTTTAAAATGCAAACCATTATGCCTtgtattatggcattcttgcgttactataaaggaatacctaagcactacataatttatactgaaaaaaaagattgacttggctcacagttctgcaggctgtacaggaagctttgcattggcagttgcttgacttcaagaagggtcctcagggagcttttacacatggcagaaggtgaagcaaaagaaggtatgtcacatggccagagcagcagcaagcagggagaggtgtcac-acactttt-aacagccagatgtaatgagaactcactcactcttgcaaggacagtgccaagagg-atggtgttaaacatgagaaatcagccttcatgaccccatcacctcccaccagaccccgactccaacactggaaattacaattcgacatgagacttaaagggtacaacatccaaactatttcattccatccctggcccttcaaatctcatgttcttctcacattgcaaaatacaatcatcccttctcaatagtcccccaaaagtctcaacctgtttcggcatcactcgaaagtgcagtttcttctgagacaaggcaagtcccttccactgatgagcctgtaaaatcaaaacaagttatttacttctaagataaaattggggtaca-ggcattgggtaaacattcccattacaaaag-gagaaattggccaaaagaaaggggctacaggccccacacaagttcaaatcccagcagggcagtcattaaaactcgatgttccaaaataatctcctttgaaaccatgtcccacatcctgggaacatagagcgttcccacgatgcatagggtgggctcccaaggccttgggctgctctgctcccacagctcttctacactgaaggcatgagctgctggtggctctatcattctgggatctggagggcagcagcccccctcccacagctccactaggccgcc-- s panTro5.chr2B 18174748 2162 + 133216015 gtgttcttctctattcctgtgaattcctatttttcttcttgaattgaagctcacaaagtttatctttatgcttatttttctacttccaagtggctgaggcacactgaaagcccctaatccatcattctaggaaaaaaaGGAtggtttaaataaaggaatgttcatataaaatatatattaattaacccaaacatattttgtttgacatgagttaggtgaatctttgatacattaattaattttaaaattgttaaataaaattagaaatatcttcgaatttgccaaggtatgtttctctcctgggattactggtcagttttattttttcctcggatagatgttttaagccataaaTCTTGACATAGACCTGATGTAGACCTCCATACCTTTCCCAGATGTGGGACGGAGCaactgggacaggtccatcctagcactaagggatgattaagcctaacttgtagtcgttgtacaactatagacatggttgatgcttcaagagaaagatcttgatggaaaggggtaaatgtaaaaattgatcatatgaattgggtcattcttgtcacaccaaataaaaccatcaagaagccagggggaggaggcattcagggcaaaaacaccactccaaaggcgtaattctctgcatgcctggctgctgaaattacctgctttaagctgaaaccagttttatcgaatggtcactgaaacaacctcttgcaacactaagactagttttacccaccactgtccctcacctatcagagcctgccagctctcaaaaaccttactggtgccagtgagctttctcaaagagaaatacataccgttttactctctgtctccc-tttttataaaacctctaactttctctttatgttttggacatactaaagacacccattcttcatgtatgtgtcaaattgtaatacttgaatctcaaataaaacattttaatttcggatgtttgtctctatatttatttgactttgacaATCTGATATTATTTAGCATTATTTCCAGTCTCCCAAATAATGTCAAAATTTTGTTATGTTAGATAGGAATATCTTGTTATTCAACTTGAAGGTAAACTGCTTGATCAATGCATGTAATTCCTTGACAGATCGTCAGCACCTCTAAGACAACATGTAGATATTGCTCATTATTAACTCATTTCATCTTTTCATGATAAATTACATAAATCTAATTTTCGTTTTTAAAATGCAAACCATTATGCCTCgtattatggcattcttgcattactataaaggaatacctaagcactacgtaatttatacagaaaagaaaggttgacttggctcacagttctgcaggctgtacaggaagctttgcactggcagttgcttggcttcaagaagggtcctcagggaggttttacacatggcagaaggtgaagcaaaagaaggtatgtcacatggccagagcaggagcaagcagggagaggtgccac-acacttttaaacagcctgatgtcatgagaactcactcactcttgcaaggacagtgccaagagg-atggtgctaaacatgagaaatcagccctcatgaccccatcacctcccaccagaccccacctccaacactgggaattacagttcaacatgagacttaaagggtacaacatccaaactatttcattccatccctggcccttcaaatctcatgttcttctcacattgcaagatacaatcatcccttctcaatagtcccccaaaagtctcaacctgtttcggcatcactcgaaagtgcagtttcttctgagacaaggcaagtcccttccactgatgcgcctgtaaaatcaaaacaagttatttacttctaagataaaatttgggtacagggcattgggtaaacattcccattacaaaagagagaaattggccaaaagaaaggggctacaggccccacacaagttcaaatcccagcaaggcagtcattaaatctcgaagttccaaaataatctcctttgaaaccatgtcccacatcctgggaacatagagcattcccaggatgcatagggtgggctcccaaggccttgggcagctctgctcccacagcttttctacactgaagacatgagctgctggtggctctatcattctgggatctggagggcagcagcccccctcccacagctccactaggcagcc-- i panTro5.chr2B n 0 C 0 s gorGor5.CYUI01000801v1 91469 2154 + 95358 gtgttcttctctattcctgtgaattcctgtttttcttcttgaattgaagctcacaaagtttatctttatgcttatttttctacttctaagtggctgaggcacactgaaagcccctaatccatcattctagg--aaaaaGGAtggtttaagtaaaggaatgttcacataaaatatatattaattaacgcaaacatattttatttgacatgagttagatgaatctttgatacattaattaattttaaaattgttaaataaaattagaaatatcttcgaatttgccaaggtatgtttctctcctgggattactggtcagttttattttttccttggatagacattttaagccataaaTCTTGACATGGACCTGATGTAGACCTCCATACCTTTCCCAgatgtgggacagaacaactgggacaggtccatcctagcactaagggatgattaaacctaacttgtagtcgttgtacaactataaacatggttgatgctttaagagaaagatcttgatggaaagggTTAAAtgtaaaaattgatcatatgaattgggtcattcttatcacaccaaataaaaccatcaacaagcca-ggggaggaggcattcagggcaaaaacaccactccaaa-gcataattctctgcatgcctggctgctgaaattacctgctttaagctgaaaccagttttatcaaatggttactgaaacaacctcttg-aacactaagactagctttacccaccactgtccctcacctgtgagagcctgccagctctcaaaaaccttactggtgccagtgaactttctcaaagagaaatacataccgtttttctctctgtctcccttttttataaaacctctaactttctctttatgttttggacatactaaagacacccattctgcatatatgtgtcaaattgtaatacttgtatctcaaataaaacattttaatttcagatgtttgtctctatatttatttgactttgacaATCTGATATTATTTAGCATTATTTCCAGTCTCCCAAATAATGTCAAAATTGTGTTATGTTAGATAGGAATATCTTGTTATTCAACTTGAAGGTAAACTGCTTGATCAATGCATGTAATTCCTTGACAGATTGTCAGCACCTCTAAG-CAACATGTAGATATTGCTCATTATTAACTCATTTCATCTTTTCATGATAAATTACATAAATTTAATTTTCATTTTTAAAATGCAAACCATTATGCCTtgtattatggcattcttgcattactataaaggaatacctaagcactacgtagtttatactgaaaaaaaagattgacttggctcacagttc-gcaggctgtacaggaagctttgtattggcagttgcttggcttcaagaagggtcctcagggagcttttacacatggcagaaggtgaagcaaaagaaggtatgtcacatggccagagcaggagcaagcagagggaggtgccacaacacttttaaacagccagatgtaatgagaactcactcactcttgcaaggacagtgccaagaggaatggtgctaaacatgagaaatcagtcctcatgaccccatcaactcccaccagacccca-ctccaacactgggaattacaattcgacatgagacttaaagggtacaacatccaaactatttcattccatccctgg-ccttcaaatctcacgttcttctcacattgcaaaatacaatcatcccttctcaatagtcccccaaaagtctcaacctgttttggcatcactcgaaagtgcagtttcttctgagacaaggcaagtcccttccaccgatgagcctgtaaaatcaaaacaagttatttacttctaagataaaattggggtaca-ggcattgggtaaacattcccattacaaaagagagaaattggccaaaagaaaggggctacaggccccacacaagttcaaatcccagcagggcagtca-taaaactcgatgttccaaaataatctcctttgaaaccatgtcccacatcatgggaacatagaacattcccaggatgcacagggtgggctcccaaggccttgggcagctctgctcccacagctcttctacactgaaggcatgagctgctggtggctctatcattctgggatctggaaggcagcagcccccctcccacagctccactaggtagcc-- i gorGor5.CYUI01000801v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 292187 2157 + 1485088 gtgttcttctctattcctgtgaattcctgtttttcttcttgaattgaagctcacaaagtttatctttatgcttatttttctacttccatgtggctgaggcacactgaaagcccctaatccatcattctagg-aaaaaaGGAtggtttaaataaaggaatgttcatataaaatatatattaattaacccaaacatattttatttgacatgagttaggtgaatctttgatacattaattaattttaaaattgttaaataaaattagaaatgtcttcgaatttgccaaggtatgtttctctcctgggatgactggtcagttttatgttttccgcggatggatgttttaagccataaaTCTTGACATAGGTCTGACGTAGACCTCCGTACCTTTCCCAGACGTGGGACGGAGCaactgggacaggtccatcctagcactaagggatgattaaacctaacttgtagtcattgtacaactataaacatggtcgatgctttaagagaaagatcttgatgaaaaggggtaaatgtaaaaattaatcatatgaattggttcattcttgtcacaccaaataaaaccatcaagaagccagggggaggaggcattcagggcaaaaacaacactccaaaaacgtaattttctgcatgcctggctgccgaaattacctgctttaagctgaagccagttttatcaaatggttactgaaacaacctcttgcaacactaaggctagttttacccaccactgtccctcacctatcagagcctgccagctctcaaaaaccttactggtgccagtgaactttctcaaagagaaatacata-cgtttt----tctgtctcccttttttatagagcctctaattttctctttatgttttggacatactaaagacacccattctgcatgtatgtgtcaaattgtaatacttgtatctcaaataaaacattttaatttcagatgtttgtctctatatttatttgactttgacaATCTGATATTATTTAGCATTATTTCCAGTCTCCCAAATAATGTCAACATTTTGTTATGTTAGATAGGAATATCTTGTTATTCAACTTGAAGGTAAACTGCTTGATCAATGCATGTAATTCCTTGACAGATTGTCAGCACCTCTAAGACAACGTGTAGATATTCCTCATTATTAACTCATTTCATCTTTTCATGATAAATTACATAAATTTAATTTTCATTTTTAAAATGCAAACCATTATGCCTtgtattatgacattcttgcattactgtaaaggaatacctaagcactatgtaatttatacagaaaaaaaaggttgacttggctcacagttctgcaggctgtataggaagccttgcattggcagttgcttggtttcaagaagggtcctcagggagcttttacacatggtggaaggtgaagcaaaagaaggtacgtcacatggccagagcaggagcaagcagggagaggtgccac-acactttgaaacagccagatatcatgagagagaactcactcctgcaaggacagtgccaagagg-atggtgctaaacatgagaaatcagccctcatgaccccatcacctcccaccagaccccaactccaacactgggaattacaattcaacatgagacttaaagggtaaaacatccaaacta-tTCAttccatccctggcccttcaaatctcatgttcttctcacattacaaaatacaatcatcccttctcaatagtcccccaaaagtctcaacctgtttcggcatcactcgaaagtgcagtttcttccgagacaaggcaagtcccttccacccatgagcctgtaaaatcaaaacaagttatttacttctaagataaaatttgggtaca-ggcattgggtaaacattcccattacaaaagagagaaattggccaaaagaaagaggctacaggccccacacaagttcaaatcacagcagggcagtcattaaatctcaaagttccaaaataatctcctttgaaaccatgtcccacatcctgggaacatacagcattcccaggatgcatagggtgggttcccaaggccttgggcagctctgcttccacagcttttctacactgaagacatgagctgctggtggctctatcattctgggatctggagggcagcagcccccctcccacagctccactaggcagcctc i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chr9 115771272 12737 - 135191526 I a score=1476.000000 s hg38.chr9_KI270719v1_random 124032 2 + 176845 cc s panTro5.chr2B 18176910 2 + 133216015 cc i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 93623 2 + 95358 cc i gorGor5.CYUI01000801v1 C 0 C 0 s ponAbe2.chr9 115784009 2 - 135191526 tc i ponAbe2.chr9 I 12737 I 1621 s nomLeu3.chrUn_GL397501_2 294344 2 + 1485088 cc i nomLeu3.chrUn_GL397501_2 C 0 C 0 a score=450613.000000 s hg38.chr9_KI270719v1_random 124034 861 + 176845 ccc-agtcaggaccctgagtggggcctccaaccccacatttccacttggcactgtcctagaagaggtcctctttgagagctccagccgtgcatagtcttctccctgggcatccagcctttctcatacatcctctgaaatttaggcagagaatgccaagcctccttcactcttgcactttgcttacctgcaggcttaacgccacatggaagccaccaaggcttatagtttgcacccactgaagccatgacctgagctctatctgcagccctttgaaccaaggctggagctagaagggccaggatgcaaggaacaccctcctgggggtggtacaggacagtgatgccctggccctggtccaAGtggaacaggaattaaaagaaattaaagaatgtgtaagcagaaactcagttgtatgtgagaaaacccaattccccctgagaaagagaaagagctggagccctttaaaaattaactgcctgtttttctgtggctagtgagcttcatctctccttctttcccaggcattgtgaagaccctgtttccctagctgtgcagctgcaaggtcactagacagataaactcaagtcataaaacatgtttttccttgaaaagtaagaaatgatataatgcatgtctcaattaattgaataactgtctttgtttctcgcttctgtaatatgcttccccctgcacagatctccccactccccaccaccccacaaaatgcttaaaagttaacttaagtctttgttcaggactcagtcctttggatgttaatctgactgggccagtgcacctaaataataaatatcctcctcaaccccatcagtctctctgattccttaaaaaatcccACTACAG s panTro5.chr2B 18176912 860 + 133216015 cccgagtcaggaccccgtgtggggcctccaaccccacatttccacttggcactgtcctagaagaggtcctctttgagggctccagctgggcataggcttcttcctgggcatccagcctttctcatacatcctctgaaatttaggcagagaatgccaagcctccttcactcttgcactttgctcacctgcaggcttaacaccacatggaagccaccaaggcttatagttagcaccctctgaagccatggcctgagctctatctggagccctttgaaccaaggctggagctagaagggccaggatgcaaggaacaccctcctgggggtggtacagggcagtggtgccctggccctggtccaAGtggaacaggaattaaaagaaattaaagaatgtgtaagcaggaactcagttgtatgtaagaaaacccaattccccctgagaaagagaaagagctggagccctttaaaaattaactgccggtttttctgtggctagtgagcctcgtctctcctcctttcccaggcattgtgaagaccctgttcctctagctgcgcagctgcaaggtcactagacagataaactcaagtcgtaaaacatgtttttccttgaaaagtaagaaatgatataatgcatgtctcaattaattgaataactgtctttgtttctcgcttctgtaatacacttccccctggacagatctccccactccccaccaccctacaaaatgcttaaaaggtaacttaagtctttgatcaggactcagtcctttggatgttaatctgactgggccggtgcaactaaataataaatatcctcctcaaccccattgg--tctctgattccttaaaaaatcccACTGCAG i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000801v1 93625 855 + 95358 ccc-agtcaggaccccgtgtggggcctccaaccccacatttccacttggcactgtcctagaagaggtcctctttgagggctccagccatgcatagtcttctccctgggcatccagcctttctcatacatcctctgaaatttaggcagagaatgccaagcctccttcactcttgcactttgctcacctgcaggcttaacaccacatggaagccaccaaggcttatagtttgcaccctctgaagccatgacctgagctctatctgcagccctttgaaccaaggctggagctagaagggccaggatgcaaggaacaccctcctgggggtggtacaggacagtgatgccctggccctggtccaAGtggaacaggaattaaaagaaattaaagaatgtgtaagcagaaactcagttgtatgtgagaaaacccaattccccctgagaaagagaaagagctggagtcctttaaaaattaactgcctgtttttctgtggctagtgagcctcatctct-ctcctttcccaggcattgtgaagaccctgtttccctagctgtgcagctgcaaggtcactagac--ataaactcaagtggtaaaacaggtttttccttgaaaagtaagaaatgatataatgcatgtctcaattaattgaataactgtctttctttctcgcttctgtaatatgcttccccctgcacagatctccccactccccaccaccc-acaaaa-gctt-aaagttaacttaagtctttgttcaggactcagtcctttggatgttaatctgactgggccggtgcacctaaataataaatatcctcctcaaccccatcggtttctctgattccttaaaaaatcccACTAcag i gorGor5.CYUI01000801v1 C 0 N 0 s nomLeu3.chrUn_GL397501_2 294346 861 + 1485088 ccc-agtcaggaccccgtgtggggcctccaaccccatatttccacttggcactgtcctagaagaggtcttctttgagggctgcagccgtgcataggcttctccctgggcatccagcctttctcatacatcctctgaaatttagggagagaatgccaagcctccttcactcgtgcactttgctcacctgcaggcttaacaccacatggaagccacaaaggcttatagtttgcaccctctgaagccatggcctgagctctatctggagccctttgaaccaaggctggagctagaagcgccaggatgcaaggaacaccctcctgggggtggtacagggcagtggtgccctggccctgctccaAGtggaacaggaattaaaagtaattaaagaatgtgtaagcagaaactcagttgtatgtaagaaaacccaattccccctgagaaagagaaagagttggagccctttaaaaattaactgcctgtttttctgtggctagtgagcctcatctctcctcctttcccaggcattgtgaagaccctgtttctctagctgtgcagctgcaaggtcactagacagataaactccagtcataaaacatgtttttccttgaaaagtaagaaatgatataatgcatgtctcaattaattgaataactgtctttgtttctcgcttctgtaatattcttccccctgcacagatctccccactccccactacctcacaaaatgcttaaaaggtaacttaagtctttgttcaggactcagtcctctggatgttaatctgactgggccggtgcacctaaataataaatatcctcctcaaccccatcggtctctctgattccttaaAAAGTCCTGCTACAG i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chr9 115784011 1621 - 135191526 I a score=382257.000000 s hg38.chr9_KI270719v1_random 124895 769 + 176845 Cctgggcatggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcagatcacgaggtcaggagattgagactatcatggctgagacagtgaaaacccgtctctactaaaaatacaaaaaattagccaggcatggtggcagtcacctgtagtcccaactacttgggaggctgagacaggagaatggcatg-tcccggaaggcagagcttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagtgagactccatctcaaaataaataaataaata----aataaaTTAATTAATTAATTAATTTTTAAAATCCCACTACAcaagaaaccattctttcatcctagacctctaggtctgtgctaggatgagctgctacaaagatttctgaaatgccttcaaggcctttttttaattttcttggctatcagcacctagctctttttcagttatgtaaatgtctctaataagtggttgctccacagcctg-ttagattcttcccctgaaaatgctttatcttcctttgccaaatgggcaggctgcaaattttctatacttgtatggtctg--cttcccatttaattgtaaattccaactttaagtcatttttttgctcctgtgtctgagtgttcaaacttcctcagatccctagtacatgaacagactgcagccaagttctttgcaaaggcataacaggcatgacctttattccaagtctcagtaagttcctcattttcatctgagaccgcatcagcc s panTro5.chr2B 18177772 755 + 133216015 Cctgggcatggtggctcacgcctgtaatcccagcactttgggaagccgaggtgggcagatcatgaggtcaggagattgagaccatcctggctaagacagtgaaaacccgtctctactaaaaatacaaaaaattagccaggcatggtggcaggtgcctgtagtcccaactacttgggaggctgaggcaggagaatggcttgaacccgggaggcagagcttgcagtgggctgagattgtgccgctgcactccagcctgggtgacagaatgagactccatctcaaaataaataaataaata--------------------aaTTAATTTATAAATTCCCACTACAcaagaaaccattctttcatcctagacctgtaggtctgtgctgggatgagctgctgcaaagctttctgaaatgccttcaaggcc-ttttttaattgtcttggctatcagcacctagctttttctcagttatgcaaatgtctctaataagtggttgctccacagcctgtttagattcttcccctgaaaatgctttatcttcctctgccaaatgggcaggctgcacattttctatacttgtatggtctgctcttcccatttaattgtacattccaactttaagtca-ttttttgctcctgcatctgagtgttcaaacttcctcagatccctagtacatgaacagactgcagccaagttttttgcaaaggcataacaggcatgacctttatttgaagtcccagtaagttcctcatttccatctgagaccacatcagcc i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01002260v1 18144 772 + 36344 Cctgggcatggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggcagatcacgaggtcaggagattgagaccatcatgg-taagacagtgaaaacccatctctaccaaaaatacaaaaaattagccaggcatggtggcagtcacctgtagtcccaactacttgggaggctgaggcaggagaatggcatgtacccgggaggcagagcttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagtgagactccatctcaaaataaataaataaataaataaataaataaataaataaataaatTTTTAAAATCCCACTACAcaagaaaccattctttcatcctagacctctaggtctgtgctgggatgagctgctgcaaagatttctgaaatgccttcaaggcctttttttaattgtcttggctatcagcaccttgctctttttcagttatgcaaatgtctctaataagtggttgctccacagcctgtttagattcttcccctgaaaatgctttatcttcctttgccaaatgggcaggctgcaaattttctatacttgtatggtctg--cttcccatttaattgtaaattccaactttaagtcatttttttgctcc-gcgtctgggtgttcaaacttcctcagatccctagtacatgaacagactgcagccaagttctttgcaaaggcataacaggcatgacctttattccaagtcccagtaagttcctcattttcatctgagaccgcatcag-c i gorGor5.CYUI01002260v1 N 0 C 0 s nomLeu3.chrUn_GL397501_2 295207 762 + 1485088 Cctgggcatggtggctcacgcctgtaatcccatcactttgggaggccgaggtgggcagatcacgaggtcaggagattgagaccatcctggctaagacagtgaaaacccgtctctactaaaaatacaaaaaattagccaggcatggtggcaggcatctgtagtcccaactactcaggaggctgaggcaggagagtggcgtgaacctgggaggcagagcttgcagtgagctgagattgtgccactgcactccagcctgggcgatagagtgggactccatctctaaataaataaataaata------------aataaataaataaatTTTAAAAATCCCACTACAcaagaaaccattctttcatcctagacctctaggtctgtgctgggatgagctgctgcaaagatttctgaaatgccttcaaggccttttgtgaattgtcttggctatcagcacctagctttttttcagttatgtaaatgtctctaataagtggttgctccacagactgtttatattcttcccctgaaaatgctgtatcttcctttgccaaatgggcaggctgcaaattttctatgcttgtatggtctg--cttcccatttaattgtaaattccaactttaagtca-ttttttgctcctgcatctgagtgttcaaacttcctcagatccctagtacatgaacagactgcagccaagttctttgcaaaggcataacaggcatgacctttattccaagtcccagtaagttcctcatttccagctgagaccgcatcagac i nomLeu3.chrUn_GL397501_2 C 0 C 0 e ponAbe2.chr9 115784011 1621 - 135191526 I a score=8467.000000 s hg38.chr9_KI270719v1_random 125664 11 + 176845 tatccttcact s panTro5.chr2B 18178527 11 + 133216015 tatccttcact i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01002260v1 18916 11 + 36344 tatccttcact i gorGor5.CYUI01002260v1 C 0 C 0 s ponAbe2.chr9 115785632 11 - 135191526 tctctttcact i ponAbe2.chr9 I 1621 N 0 s nomLeu3.chrUn_GL397501_2 295969 11 + 1485088 tttccttcact i nomLeu3.chrUn_GL397501_2 C 0 C 0 a score=1236562.000000 s hg38.chr9_KI270719v1_random 125675 2365 + 176845 gtccatatcactatcagcattttggtcacaaccatttaactagtctctaagaaattcagaactttccttcatcttcctgtattaggagcagtccaaactcttccaactcctgcccattacctagttccaaagtcacttccacactttcaagtatctttatagcaatgccccatgtctcagtaccaatttgctgtattaggccattcttacattgctgtgaagaaatacctgagactgggtaatttataaagaaaagagctttgaaaagaggtttgtatagctgcaggctgtacaaacatgattctggcatctgcctagcttctggtgaggcctcaggaggc-tttattcatggcagaagatgaagaaggagcaggcaggcac-atcacctggcaaggcaggggaagcaccacacacttttaaacaaatagatcttgcaagaattcactcactctcacaaggacagcaccagggacaggatgctagaccatttctgagaaatccacccccatgatccaatcacctccttccagacctaccaccaacattgggggtatcacaattcaacatgagatttagagggaacaACATCTGAGGTATTTCATGCCTCATGTTGTGACTTGGTATAATGTCCATAAGATTACACTGACTTTACACATCATATTGCAGTTTTTGCTAGCTCTTCTGTAGTAAGAAAATGGAATTCATCAGCAATGCCTTCTAAGTCTGGCTCTGTTTTCCCATGCAGACTTTTCCCTGAGCTCTGCTTGTCAGTCTTGCTAGAACCTCACCCTAGGCAGCAACCTCCAGTCTGAGATTGCCCTTGACAGTGGCTGAGGTTTGCATTGTTGGAATGGATTAGAAAAAACAAAGGGAAGACAGACCAAAACACATTTAAATACGGATCCCATTTGTTGAAGTTTTAAGTAATTTTAAATGTTTATTTGCACCAGCTGCCCACTCCCATTGTACTCTCCTCACCCAAAAAGG-TGACTTGATATTCTAGTAAAAAGCCAAACTGTGCTTTAGAGAAACCCACTTGTTACTTCTTTAAATCCATATAATTTTGCCAAAGTGAATTTTTGTTAATATGCTCTGGCAGAATCAGTAAACTAATTATTTACACCAGAGTCACTTAACCTTTCCTCTTGGTCATTTGCATGTAAATTATTTTTATATGTATAAAATTTGCTTACTCAAGAAAGCTCTT-GCTATATATATATATATTTTTTTTTTTGTGGTATCTTAACATACTCTAGTCTTGTCTTGAATTCCTTAAGACTTTGAGGTAAAGAACTCTCTTGTAACAAGTTTCCAAATCAAAGTGGGAAAGAGGAAGATTAGGTTAAGCATTAGGTCATCAGGTATGTAGGACAGCTAATTCCATTATCAGAATGGTAGTGATAGCCAGTTTGCATTTTGCATATTAGTTGTAACAAAAATATTCAGCATATTAGTGACAAAACCAAAGTTATTGTGAATCAGTTTATAAtttattttttgagatagggtcttaatctgtcacccaagctcaagtgcagaggtgtgatcttggttcactgaagcctcaaccacctgggctcaagagatcctcccagcccagcctccttagtacaggtgagtgccaccacacccagctatttttttctctactttttgtagagattgggtctcactttgttgccaaggctgttctcaaaatcctgggctcaagcaatccttctgcctcaacctcccaagtggtgctgggattacaggtttgagccaccgcacctggccAGTTTATAATGTTAATGGCTTTTGGAGCAGGAACCAGTGGGTGCTGCCTCTTGTCTGCAAGATGAGGAGTCTCCTCTCCCCAGAAGTGAGGCATCTTCTACCACAAGGGAGGCTTTGCCCAAACAGTCACCGAAAGGCTGAGATTGGGAAGGGAACAAAACAGGAGTGAATATGTTCCTGGAACCTAACTGCCCCCCAATTCAACTCTACTGCAGACATTCAGAATGAAGGGGACATTCAGCTGAAGAACAGGAGTTAAAAGAACAGCTGTTAAAATCTCAGATTGTAAAAACAATTTTGCTTCATTTTCCCTAAATAATTTTTAAACAATTGTTCTTAGGTGATATTCTAAACTTCGGGTAATATCTGTGACTTAGTAAATGTTCTTTAAAAGATGGGATAATATTTTTATTTTGTTTAATTATATGTGTTTTTAAACTAATTTTATAGGAAAAATAATTTCTTTCCTTCCCTGTTATACCAAATACAGCCTTTAGCTCAAGACACAAGTAATTCCAGGAAAACTGGAATGTAAGTTCAATATGTTGCACTAAGTACATTTGAAAGTGCATGCATTTTTATTTTaatt s panTro5.chr2B 18178538 2355 + 133216015 gtccatatcactatcagcattttggtcacaaccatttaactagtctctaagacattcagaactttccttcatcttcctgtattctgagccttacaaactcttccaactcctgcccattgcctagttccaaagtcacttccacattttcaagtatctttatagcaatgccccatgtctcagtaccaatttTCtgtattaggccattcttgcattgctataaagaaatacctgagactgggaaatatataaagaaaagaggtttgaaaagaagattgtatagctgcaggctgtacaagcatggttctggcatctgcctagcttctggtgaggcctcaggaggcttttattcatggcagaagatgaagaaggagcaggcaggcactatcacctggcaaggcaggggaagcaccacacacttttaaacaaatagatcttgcaagaattcactcgctatcacaaggacagcaccagggagatgatgctagaccattcctgagaaatccacccccatgatccaatcacctccctccagacctaccaccaacattggggatatcacaatgcaacatgagatttagagggaacaACATCTGAGGTATCTCATGCCTCATGTTGTGACTTGGTATAATTTCCATAAGATTACACTGACTTTACACATCATATTGCAGTTTTTGCTAGCTCTCCTGTAATAAGAAAATGGGATTCATCAGCAATGCCTTCTAAGTCTGGCTCTGTTTTCCCATGCAGACTTTTCCCTGAGCTCTGCTTGTAAGTCTTGCTAGAACCTCACCCTAGGCAGCAACCCCCAGTCTGAGACTGCCCTTGACAGTGGCTGAGGTTTGCATTGTTG----GGATTAGAAAAAACAAAGGGAAGATAGACCAAAACAGATTTAAATACAGATCCCATTCGTTGAAGTTTTAAGTAATTTTAAATGTTTATTTTCACCAGCTGCCCACTCCCTTTGTACTCTCCTCACCCAAAAAAGCTGACTTGATATTCTAGTAAAAAGCCAAACTGTGCTTTAGAGAAACCCACTTGTTACTTCTTTAAATCCATATAATTTTGCCAAAGTGAATTTTTCTTAATATGCTCTGGCAGGATCAGAAAACTAATTATTTACACTAGAGTCACTTAACCTTTCCTCTTGGTCATTTGCATGTAAATTATTTTTATATGTATAAAATTTGCTTACTCATGAAAGCTCTTAACTATGCATAT-----TTTTTGTTTCTGTGGTATCTTAACATATTCTAGTCTTGTCTTGAATTCCTTAAGACTTTGGGGTAAAGAACTCTATTGCAACAAGTTTCCACATCAAAGTGGGAAAGAGGAAGATTAGGTTAAGCATTAGGTCGTCAGGTATGTAGGACAGCTAATACCATTATCAGAATGGTAGCGATAGCCAGTTTGCATTTTGCATATTAGTTGTAACAAAAATATTCAGCATTTTAGTGACAAAACCAAAGTTGTTGTGAATCAGTTTGTAAtttattttttgagatagggtcttactctgtcacccaagctcaagtgcagaggtgtgatcttggctcactgcagcctcaaccacctaggctcaagagatcctcccagcccagcctccttagtacaggtgagtgccaccacacccagcta-ttttttctctagtttttgtagagattgggtctcactttgttgcccaggctgttctcaaactcctgggctcaagcaatccttctgtctcaacctcccaaatggtgctgggattacaggtttgagccacctcacctggccAGTTTATAATGTTAATGGCTTTTGGAGCAGGAACCAGTGGGTGCTGCTTCTTGTCTGCAAGATGAGGAGCCTCCTCTCCCCAGAAGTGAGGCATCTTCTACCACAAGGGAGGCTTTGCCCAAACAGTCACCGAAAGGCTGAGATTGGGGAGAGAACAAAACAGGAGTGAATATTTCCCTGGAAACTAACTGCTCCCCAATTCAATTCTACTGCAGACATTCAGAATGAAGGGGACATTCAGCTGAGGAACAGGAGTGCACTG----GCTGTTAAAATCTCAGATTGTAACAACAATTTTGCTTCATTTTCCCTAAATAATTTTTAAACAATTGTTCTTAGGTGGTTTTCTAAACTTCGGGTAATATCTGTGAATTAGTAAATGTTCTTTAAAAGATGAGATAATATTTTTATTTTGTTTAATTATATGTGTTTTTAAACTAATTTTGTGGGAAAAATAATTTCTTTCCTTCCCTGTTATACCAAACACAGCCTTTAGCTCAAGACATAAGTAATTCCAGGAAAACTGGAATTTAAGTTCAATATGTTACACTAAGTACATTTGAAAGTTCATGCATTTTTATTTTAATT i panTro5.chr2B C 0 n 0 s gorGor5.CYUI01002260v1 18927 2353 + 36344 gtccatatcactatcagcattttggtcacaaccatttaactagtctctaagaaattcagaactttccttcatcttcctgtattctgagccctccaaactcttccaactcctgcccattacctagttccaaagtcacttccacattttcaagtatctttatagcaatgccccatgtctcagtaccaatttTCtgtattaggccattcttacattgctataaagaaatacctgagactgggtaatttataaagaaaagaggtttgaaaagaggtttgtatagctgcaggctgtacaagcatgattctggcatctgcctagcttctggtgaggcctcaggaggcttttattcacggcagaagatgaagaaggagcaggcaggcac-atcacctggcaaggcaggggaagcaccacacacttttaaacaaatagatcttgcaagaattcactcactatcacaaggacagcaccagggacaggatgctagaccatttctgagaaatccacccccatgatccaatcacctccctccagacctaccaccaacattggggatatcacaattcaacatgagatttagagggaacaACATCTGAGGTATCTCATGCCTCATGTTGTGACTTGGTATAATGTCCATAAGATTACACTGACTTTACACATCATATTGCAGTTTTTGCTAGCTCTTCTGTAGTAAGAAAATGGGATTCATCAGCAATGCCTTCTAAGTCTGGCTCTGTTTTCCCATGCAGACTTTTCCCTGAGCTCTGCTTGTCAGTCTTGCTAGAACCTCACCCTAGGCAGCAACCTCCAGTCTGAGATTGCCCTTGACAGTGGCTGAGGTTTGCATTGTTG----GGATTAGAAAAAACAAAGGGAAGACAGACCAAAACAGATTTAAATACAGATCCCATTTGTTGAAGTTTTAAGTAATTTTAAATGTTTATTTTCACCAGCTGCCCACTCCCATTGTACTCTCCTCACCCAAAAAGG-TGACTTGATATTCTAGTAAAAAGCCAAACTGTGCTTTAGAGAAACCCACTTGTTACTTCTTTAAATCCATATAATTTTGCCAAAGTGAATTTTTCTTAATATGCTCTGGCAGAATCAGAAAACTAATTATTTACACCAGAGTCACTTAACCTTTCCTCTTGGTCATTTGCACGTAAATTATTTTTATATGTATAAAATTTGCTTACTCAAGAAAGCTCTT-GCTATATATATATATATT----TTTTTGTGGTATCTTAACATACTCTAGTCTTGTCTTGAATTCCTTAAGACTTTGAGGTAAAGAACTCTATTGTAACAAGTTTCCAAATCAAAGTGGGAAAGAGGAAGATTAGGTTAAGCATTAGGTCATCAGGTATGTAGGACAGCTAATTCCATTATCAGAATGGTAGTGATAGTCAGTTTGCATTTTGCATATTAGTTGTAACAAAAATATTCAGCATATTAGTGACAAAACCAAAGTTATTGTGAATCAGTTTATAAtttattttttgagatagggtcttactctgtcacccaagctcaagtgcagaggcatgatcttggctcactgcagcctcaaccacctgggctcaagagatcctcccagcccagcctccttagtacaggtgagtgccaccacacccagcta-ttttttctctagtttttgtagagattgggtctcactttgttgccaaggctgttctcaaactcctgggctcaagcaatccttctgcctcaacctcccaagtggtgctgggattacaggtttgagccaccgcacctggccAGTTTATAATGTTAATGGCTTTTGGAGCAGGAACCAGTGGGTGCTGCTTCTTGTCTGCAAGATGAGGAGTCTCCTCTCCCCAGAAGTGAGGCATCTTCTACCACAAGGGAGGCTTTGCCCAAACAGTCACCGAAAGGCTGAGATTGGGGAAAGAACAAAACAGGAGTGAATATGTTCCTGGAACCTAACTGCTCCCCAATTCAATTCTACTGCAGACATTCAGAATGAAGGGGACATTCAGCTGAGGAACAGGAGTGCACTG----GCTGTTAAAATCTCAGATTGTAAAAACAATTTTGCTTCATTTTCCCTAAATAATTTTTAAACAATTGTTCTTAGGTGATTTTCTAAACTTCAGGTAATATCTGTGAATTAGTAAATGTTCTTTAAAAGATGGGATAATATTTTTATTTTGTTTAATTATATGTGTTTTTAAACTAATTTTATAGGAAAAATAATTTCTTTCCTTCCCTGTTATACCAAATACAGCCTTTAGCTCAAGACACAAGTAATTCCAGGAAAACTGGAATGTAAGTTCAATATGTTGCACTAAGTACATTTGAAAGTGCATGCATTTTTATTTTAATt i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chrUn_GL397501_2 295980 2351 + 1485088 gtccatatcactatcagcattttggtcacaaccatgtaactagtctctaagaaattcagaactttccttcatcttcctgtattctgagccctccaaactcttccaactcctgcccattacctagttccaaagtcacttccacattttcaagtatctttatagcaatgccccatgtctcagtaccaatttTCtgtattaggccattcttgcattgctataaagaaatacctgagactgggtaatttataaagaaaagagttttgaaaagaggtttgtatagcttcaggctgtacaagcatggttctggcatctgcctagcttctggtgaggcctgaggaggcttttattcacggcagaagatgaagaaggagcaggcaggcac-atcacctggcaaggcaggggaagcaccacacacttttaaacaaatagatcttgcaagaattcactcactgtcacaaggacagcaccagggagatgatgctagaccattcctgagaaatccacccccatgatccaatcacctccctccagacctaccaccaacactggggatatcacaattccaaatgagatttagagggaacaACATCTGAGGTATCTCATGCCTCGTGTTGTGACTTGGTATAATTTCCACAAGATTGCACTGACTTTACACATCATGTTGCAGTTTTTGCTAGCTCTTCTGTAGTAAGAAAATGGGATTCATCAGCAATGCCTTCTAGGTCTGGCTCTGTTTTCCCATGCAGACTTTTCCCTGAGCTCTGCTTGTAAGTCTTGCTAGAACCTCACCCTGGGCAGCAACCTCCAGTCTGAGATTGCCCTTGACAGTGGCTGAGGTTTGCATTGTTG----GGATTAGAAAAAACAAACAGAAGATAGACCAAAACAGATTTAAATACAGATCCCATTTGTTGAAGTTTTAAGTAATTTTAAATGTTTATTTTCACCAGCTGCCCACTCCCGTTGTACTCTCCTCACCCAAAAAACGTGACTTGATATTCTAGTAAAAAGCCAAATTGTGCTTTAAAGAAACCCACTTGTTACTTCTTTAAATCCATATAATTTTGCCAAAGTGAATTTTTCTTAATATGCTCTGGTGGGATCAGAAAACTAATTATTTACACCAGAGTCACTTAACCTTTGCTTCTGGTCATTTGCATGTAAATTATTTTTATATGTATAAAATTTGCTTACTCATGAAAGCTCTG-ACTATGTATAT-----TTTTTGTTTTTGTGGTATATTAACATATTCTAGTTTTGTCTTGAATTCCTTAAGACTTTGAGGTAAAGAACTCTACTGCAATGAGTTTCCAAATCAAAGTGGGAAAGAGGAAGATTAGGTTAAGCATTAGGTCATCAGGTATGTAGGACAGCTAATTCCATTATCAGAATGGTAGTGATAGCCAGTTTGCATTTTGCATATTAGTTGTAACAAAAATATTCAGCGTATTAGTGACGAAACCAAAGTTATTGTGAATCAGTTTATAAtttattttttgagatagggtcttactctgtcacccaaactcaagtgcagaggcgtgatcttggctcactgcagcctcaaccacctgggctc--gagatcctcccagaccagcctccttagtacaggtgagtgccaccacacccagcta-ttttttctccagtttttgtagagattgggtctcactgtgttgcccaggctgttctcaaattcctgggctcaagcaatccttttgcctcaacctcccaaatggtgctgggattacaggtttgagccaccgcacctggcTAGTTTATAATGTTAATGGCTTTTGGAGCAGGAACCAGTGGCAGCTGCTTCTTGTCTGCAAGATGAGGAGCCTCCTCTCCCCAGAAGTGAGGCATCTTCTACCACAAGGGAGGCTTTGCCCAAACAGTCACCGAAAGGCTGAGATTGGGGAGAGAACAAAACAGGAGTGAATATGTCCCTGGAACCTAACTGCTCCCCAAATCAATTCTACTGCCGACATTCAGAAAGAAGGGGACATTCAGCTGAGGAACAGGAGTGCACTG----GCTGTTAAAATCTCAGATTGTAACAATAGTTTTGCCTCATTTTCCCTACATAATTTTTAAACAATTGTTCTAAGGTGATTTTCTAAACTTTGGGTAATATCTGTGAATTAGTAAACGTTCTTTAAAAGATGGGATAATATTTTTATTTTGCTTAATTATATGTGTTTTTAAACTAATTTTGTGGGAAAAATAATTTCTTTCCTTCCCTGTTATACCAAATACAGCCTTTAGCCCAAGACACAAGTAATTCCAGGAAAACTGGAATTTAAATTCAATATGTTGCACTAAGTACATTTGAAAGTGCATGCATTTTTATTTTAATT i nomLeu3.chrUn_GL397501_2 C 0 N 0 a score=19765.000000 s hg38.chr9_KI270719v1_random 128040 229 + 176845 catcattctcagtcaactatcgcaaggacaaaaaacgaaacaccgcatgttctcactcatagctgggaattgaacaatgagaacacatggacacaggaaggggaacatcacactctgggggctgttgtgggt--ggggagaggggtgagggatagcattaggagatatgcctaaggctaaatgtcgagttaatgggttcagcacaccagcatggcacatgtatacatatgt s gorGor5.CYUI01002260v1 21280 230 + 36344 catcattctcagtcaactatcgcaaggacaaaaaaccaaacaccgcatgttctcactca-aggtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacactctgggggctgttgtggggtgggggagaggggggagggatagcattaggagatatgcctaaggctaaatgtcgagttaatgggtgcagcacaccagcatggcacatgtatacatatgt i gorGor5.CYUI01002260v1 C 0 C 0 e panTro5.chr2B 18180893 0 + 133216015 I a score=3362.000000 s hg38.chr9_KI270719v1_random 128269 20 + 176845 aaTGTATACATATGTTAATG s gorGor5.CYUI01002260v1 21510 20 + 36344 aaTGTATACATATGTTAATG i gorGor5.CYUI01002260v1 C 0 C 0 s calJac3.chr3 145650845 16 + 190850796 AGTGGATGGATATGTA---- i calJac3.chr3 N 0 C 0 s saiBol1.JH378162 14561689 16 + 15139346 AGTGGATACATATGAA---- i saiBol1.JH378162 N 0 C 0 e panTro5.chr2B 18180893 0 + 133216015 I a score=102324.000000 s hg38.chr9_KI270719v1_random 128289 11 + 176845 CACCAATTCTG s panTro5.chr4 86960602 11 + 194502333 CACCAATTAGG i panTro5.chr4 n 0 C 0 s panPan2.chr4 87736950 11 + 195804263 CACCAATTAGG i panPan2.chr4 N 0 C 0 s gorGor5.CYUI01002260v1 21530 11 + 36344 CACCAATTCTG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42530842 11 + 85365473 CACCAATTCGG i nomLeu3.chr20 N 0 C 0 s rheMac8.chr5 145373703 11 - 190429646 CACCAGTTCCG i rheMac8.chr5 N 0 C 0 s macFas5.chr5 144399668 11 - 189454096 CACCAGTTCCG i macFas5.chr5 N 0 C 0 s macNem1.NW_012011022v1 3514074 11 + 39453387 CACCAGTTCCG i macNem1.NW_012011022v1 N 0 C 0 s cerAty1.NW_012002843v1 1136528 11 + 25348628 CACCAGTTCCG i cerAty1.NW_012002843v1 N 0 C 0 s manLeu1.NW_012102858v1 49997 11 + 130402 CACCAGTTCCG i manLeu1.NW_012102858v1 N 0 C 0 s colAng1.NW_012120821v1 4188838 11 + 12320365 CACCAGTTCCG i colAng1.NW_012120821v1 N 0 C 0 s calJac3.chr3 145650861 11 + 190850796 CACAAATTCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14561705 11 + 15139346 CACCAATTCTG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 387599 11 + 3802414 CACCAATTCTG i cebCap1.NW_016107603v1 N 0 C 0 s aotNan1.NW_018493494v1 9746717 11 + 11631747 CACCAATTCTG i aotNan1.NW_018493494v1 N 0 C 0 s canFam3.chr13 21692273 11 - 63241923 CACTAATTCTA i canFam3.chr13 N 0 C 0 s dasNov3.JH575793 104634 11 + 255898 CACCAATTCAA i dasNov3.JH575793 N 0 C 0 a score=2572826.000000 s hg38.chr9_KI270719v1_random 128300 262 + 176845 CATCAAGTCAGTGCAATCAGAGACACTGCAAG-AAT-GACTTTTG----GTTTTCTTTTCCTAGTTTTTGGAAGT-TTCTCAAGTCTGTCATACTGGACTCTATATTACATC-TCG---A--------------A-TTTTTTT-CACTTACTATAGATCTCCTATACGCTCAATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATGACATTTGAGG-CTGCCAAAGTGATTATTACATGATAAAACATATACTTGGTTAAAGGCAATATTTAAC---AATTGTAA s panTro5.chr4 86960613 261 + 194502333 CATCAAGTCAGTGCAATCTGAGACACTGCAAG-AAT-GACTTCTG----GTTTTCTTTTCCTACTTTTTGAAAGT-TTTTGAAGTCTGTCATGCTGGACT-TGTATTACATC-TTA---A--------------T-TTTTTTTTCACTTACTATAGATCTC-TATACTCTCCATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATAGCATTTGAGG-CTACCAAAGTGACTATTACATGATAAAACATATACTTAATTAAAGGCAATATTTATC---AATTGTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87736961 259 + 195804263 CATCAAGTCAGTGCAATCTGAGACACTGCAAG-AAT-GACTTCTG----GTTTTCTTTTCCTACTTTTTGAAAGT-TTTTGAAGTCTGTCATGCTGGACT-TGTATTACATC-TTA---A--------------T-TTTTTTTTCATTTACTATAGATCTC-TATA--CTCCATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATAGCATTTGAGG-CTACCAAAGTGACTATTACATGATAAAACATATACTTAATTAAAGGCAATATTTATC---AATTGTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 21541 261 + 36344 CATCAAGTCAGTGCAATCAGAGACACTGCAAG-AAT-GACTTTTG----GTTTTCTTTTCCTAGTTTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACT-CGTATTACATC-TTG---A--------------A-TTTTTTT-CACTTACTATAGATCTCCTATACGCTCAATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATGACATTTGAGG-CTGCCAAAGTGATTATTACATGATAAAACATATACTTGGTTAAAGGCAATATTTAAC---AATTGTAA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42530853 260 + 85365473 CATCAAGTCAGTACAATCTGAGACACTGCAGG-AAT-GACTTCCG----GTTTTCTTTTCCTACTTTTTGAAAGT-TTTTGAAGTCTGTCATGCTGGACT-TGTATTACATC-TTA---A--------------A-TTTTTTTTCACTTACTACAGATCTC-TATACTCTCAACTGTTTAGCTATTACCTTAACA-TTTCCCCTGTGAACCCATGGCATTTGAGG-C-ACCAAAGTGACTATAACATGATAAAACATATGCTTAGTTAAAGGCAATATTTATC---AATTGTAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145373714 262 - 190429646 CATCAAGTCAGTGCAATCTGAGACACTGCAAGAAAT-GACTTTTG----GTTTTCTTTCCCTACTTTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACT-TGTATTACATC-TTG---A--------------A-TTTTTTTTCATTTGCTATAGATCTC-TATATGCTCAATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATGGCATTTGAGG-CTACCAAAGTGACTATTATATGATAAAACATATACTTAGTTAAAGGCAATATTTATA---AATTATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144399679 263 - 189454096 CATCAAGTCAGTGCAATCTGAGACACTGCAAGAAAT-GACTTTTG----GTTTACTTTCCCTACTTTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACT-TGTATTACATC-TTG---A--------------ATTTTTTTTTCATTTGCTATAGATCTC-TATATGCTCAATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATGGCATTTGAGG-CTACCAAAGTGACTATTACATGATAAAACATATACTTAGTTAAAGGCAATATTTATC---AATTATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3514085 262 + 39453387 CATCAAGTCAGTGCAATCTGAGACACTGCAAGAAAT-GACTTTTG----GTTTTCTTTCCCTACTTTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACT-TGTATTACATC-TTG---A--------------A-TTTTTTTTCATTTGCTATAGATCTC-TATATGCTCAATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATGGCATTTGAGG-CTACCAAAGTGACTATTACATGATAAAACATATACTTAGTTAAAGGCAATATTTATC---AATTATAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1136539 262 + 25348628 CATCAAGTCAGTGCAATCTGAGACACTGCAAGAAAT-GACTTTTG----TTTTTCTTTTCCTACTTTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACT-TGTATTACATC-TTG---A--------------A-TTTTTTTTCATTTACTATAGATCTC-TATACACTCAATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATGGCATTTGAGG-CTACCAAAGTGACTATTACATGATAAAACATATACTTAGTTAAAGGCAATATTTTTC---AATTATAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5147308 262 + 48547382 CATCAAGTCAGTGCAATCTGAGACACTGCAAGAAAT-GACTTTTG----GTTTTCTTTTCCTACTTTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACT-TGTATTACATC-TTG---A--------------A-TTTTTTTTCATTTACTATAGATCTC-TATACACTCAATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATGGCATTTGAGG-CTACCAAAGTGACTATTACATGATAAAACATATACTTAGTTAAAGGCAATATTTATC---AATTATAA i chlSab2.chr27 N 0 C 0 s manLeu1.NW_012102858v1 50008 262 + 130402 CATCAAGTCAGTGCAATCTGAGACACTGCAAGAAAT-GACTTTTG----GTTTTCTTTTCCTACTTTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACT-TGTATTACATC-TTG---A--------------A-TTTTTTTTCATTTACTATAGATCTC-TATACGCTCAATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATGGCATTTGAGG-CTACCAAAGTGACAATTACAGGATAAAACATATACTTAGTTAAAGGCAATATTTATC---CATTATAA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4188849 260 + 12320365 CATCAAGTCAGTGCAATCTGAGACACTGCAAG-AAT-GACTTTTG----GTTTTCTTTTCCTACTTTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACT-TGTGTTACATC-TTA---A--------------A--TTTTTTTCATTTACTATAGATCTC-TATATGCTCAATTGTTTAGCTATTACCTTAACA-TTTACCCTGTGAACCCATGGCATTTGAGG-CTACCAAAGTGACTATTACATAATAAAACATATACTTAATTAAAGGCAACATTTATC---AATTATAA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145650872 258 + 190850796 CATCAAGTCAGTGCAATATGAGACACTGCAAG-TAT-GACTTTCG----GTTTTCTTTT-CTAG-TTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACTCTGCA-TATATC-TTG---A----------------TTTTTTTTCACTTACTATAGCTCTC-TATACTCTCAATTGTTTAGCTATTACTTTAACA-TTTACCTTGTAAACCTGTGGCATTTGAGA-CTACCAAAGTGATTATTACATGATACAACATATACTTAGTTAAAGGCAATATTTAAC---CACTGTAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14561716 261 + 15139346 CATCAAGTCAGTGCAATCTGAGACACTGCAAG-TAT-GACTTTCG----ATTTTCTTTTCCTAG-TTTTCAAAGT-TTCTCAAGTCTGTCATACTGGACTCTAT--TACATC-TTG---ATT------------T-TTTTTTTTCACTTACTACAGATGTC-TACACTCTCAATTGTGTAGCTATTACTTTAACA-TTTACCCTGTAAACCCGTGGCATTTGAGG-CTACCCAAGTGATTATTACATGATACAACATATACTTAGTTAAAGGTAATATTTAAC---AACTGTAC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 387610 269 + 3802414 CATCAAGTCAGTGCAATCTGAGACACTACAAG-TAT-GACTTTCG----GTTTTATTTTCCTAG-TTTTGAAAGT-TTCTCAAGTCTGTCATACTGGACACTAT--TACATC-ttt---atttttatttatttat-tttttttttGCTTACTATAGATCTC-TATACTCTCAATTGTTTAGCTATTACATTAACA-TTTACCCTGCAAACCCGTGGCATTTGAGG-CTACCAAAGTGATTACTACATGATACAACATATAC----TTAAAGGCAATATTTAAC---AACTGTAC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9746728 271 + 11631747 CACCAAGTCAGTGCAATCTGAGACACTGCAAG-TAT-GACTTTCG----GTTTTCTTTTCCTAG-TTTTGAAAGT-TTCTCAAGTCTGTCATACCGGACTCTGTATTACGTC-TCG---ATTTTTTT-------T-TTTTTTTTCACTTACTATAGATCTC-TATACTCTCAATTGTTTAGCTAGTACTTTAACA-TTTACCCTGTAAACCTGTGGCATTTGAGG-CTACCAAAGTTATTATTACATGATACAACATATACTTAGTTAAAGGCAATATTTAACTCACGCAGTAC i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21692284 252 - 63241923 CATTAGGCCAGTACAATCTG----GCAGTAAA-AATAGGCCACTG----TCTTCCCCCTGCTACTGTTTGAAAGTGCTCCCAAGGATGTCTTACTGAGCTCTGTATTATATC-TCGGGAA--------------T-TTTTACCCCACTTGATAGAGATCAT-GTTA-----------TCAGCTGTTACCTTAA-A-TTTGCCCTGTGAACTCGTGGAATTTGAGGTCTATCAAAGTGATTATTAAGTGATCCACCACATGCTTGGTTAAAGGCAAAATTTAAC---ATCCAGAA i canFam3.chr13 C 0 I 3809 s dasNov3.JH575793 104645 241 + 255898 CATCTAGTCAGCCTAATCTAGGGCATTAAAA--TAT-GCATTTTATTATGTTTTCAACTCCTACTGTTTAAAGTT-GTCCCAGATATGTATTACAGGTCTCCGTATGCCATCTTTG---A--------------A-TCTGGTTTCTCTTAAGGTCGCTCTT-CATACTGTTGATTATTTAACAATTACCTTAATATTTTTCCTTGTGACCCCTAGACATTCATGG-----------------TACATGGCAAAAT----------TTACATGCAAGATTTAAC---AACTGGAC i dasNov3.JH575793 C 0 C 0 a score=3114815.000000 s hg38.chr9_KI270719v1_random 128562 289 + 176845 AACCAATAAATCA-----------------ATAATTA------AATCTTTCTGGCTTAGACTTAAAACTGCTTAATTTAGTCATATCTCTACCCACAACATAgagattccaacaagggttgaaagtagagttggcaagcatttccattctct-tctgggataataattcttactaccaacactggttctgaccagtgaaattcaaaatcagtgaaacactacccagagtctgAGTGAACCAAAAATAGTTTCACTTTAGGAAAAAGTCTATATCCTTAGATGTGAGTGATTCTCTGTGAACATTTTATTCAC--T-- s panTro5.chr4 86960874 291 + 194502333 AACCAATAAATCA-----------------ATAATTA------AACCTTGCCGACTTATACTTAAAACTGCTTAATTTAGTCATACCTCTACCCACAGCATAGGGATTCCAACAGGGGTTGAAAGTAGAGTTGGCAAGCATTTCCATTCTCT-TCTGGGACAATCATTCTTACTACCAACTGTGACTTTGACCAGTGAACTTCAAAATCATTTAAACACTCTCCAGAGTCTGAGTGAGCCAAAAATAGTTTCACTTTAGGAAAAAGTCTGTATCCTTAGATGTGAGTAATTCTCTGTGAGCATTTTATTCACATG-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737220 291 + 195804263 AACCAATAAATCA-----------------ATAATTA------AACCTTGCCGACTTATACTTAAAACTGCTTAATTTAGTCATATCTCTACCCACAGCATAGGGATTCCAACAGGGGTTGAAAGTAGAGTTGGCAAGCATTTCCATTCTCT-TCTGGGACAATCATTCTTACTACCAACTGTGACTCTGACCAGTGAACTTCAAAATCATTTAAACACTCTCCAGAGTCTGAGTGAGCCAAAAATAGTTTCACTTTAGGAAAAAGTCTGTATCCTTAGATGTGAGTAATTCTCTGTGAGCATTTTATTCACATG-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 21802 288 + 36344 AACCAATAAATGA-----------------ATAATTA------AATCTTTCTG-CTTAGACTTAAAACTGCTTAATTTAGTCATATCTCTACCCACAACATAGGGATTCCAACAAGGGTTGAAAGTAGAGTTGGCAAGCATTTCCATTCTCT-TCTGGGACAATAATTCTTACTACCAACACTGGTTCTGACCAGTGAAATTCAAAATCAGTGAAACACTACCCAGAGTCTGAGTGAACCAAAAATAGTTTCACTTTAGGAAAAAGTCTATATCCTTAGATGTGAGTGATTCTCTGTGAACATTTTATTCAC--T-- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531113 289 + 85365473 AACCAATAAATCA-----------------ATAATTA------AATCTTGCTGACTTAGACTTAAAACTGCTTAATTTAGTCATGTCTCTACCCACAGCATAGGGATTCCAACAGGGGTTGAAAGTAGAGTTGGCAAGCATTTCCATTCACT-TCTGGGACAATAATTCTTACTACCAACTCTGATTCTGACCAGTGAACTTCAAAATCATTTAAACACTATGC--AGTCTGAGTGAGCCAAAAATAGTTTCACTTTAAGAAAAAGTCTATATCCTTAGATGTGAGTGATTCTCTGTGAACATTTTATTCACATG-- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145373976 289 - 190429646 AACCAATAAATCA-----------------ATTATTA------AACCTTGCTGACTTAGACTTAAAACTGCTTAATTTAGTCATATCTCTACCTATAGCATAGGAATTCCAATAGGGGTTGAAAGTAGAGTTGGCAAGCATTTCCTTTCTCT-TCTGGGACAGTAATTCTTACTACCAACTCTGATTCTGACCAGTGAACTTCAAAATCAATTAAATACTATCCAGAGTCTGAGTGAGCCAAAAATATATTCACTTTAGGAAAAAGTCTATATCCTTAGATGTGAGTGATTCTCTGTGAACATTTTATTCACA---- i rheMac8.chr5 C 0 I 2 s macFas5.chr5 144399942 289 - 189454096 AACCAATAAATCA-----------------ATTATTA------AACCTTGCTGACTTAGACTTAAAACTGCTTTATTTAGTCATATCTCTACCTATAGCATAGGAATTCCAACAGGGGTTGAAAGTAGAGTTGGCAAGCATTTCCTTTCTCT-TCTGGGACAGTAATTCTTGCTACCAACTCTGATTCTGACCAGTGAACTTCAAAATCAATTAAATACTATCCAGAGTCTGAGTGAGCCAAAAATATACTCACTTTAGGAAAAAGTCTATATCCTTAGATGTGAGTGATTCTCTGTGAACATTTTATTCACA---- i macFas5.chr5 C 0 I 2 s macNem1.NW_012011022v1 3514347 289 + 39453387 AACCAATAAATCA-----------------ATTATTA------AACCTTGCTGACTTAGACTTAAAACTGCTTAATTTAGTCATATCTCTACCTATAGCATAGGAATTCCAACAGGGGTTGAAAGTAGAGTTGGCAAGCATTTCCTTTCTCT-TCTGGGACAGTAATTCTTACTACCAACTCTGATTCTGACCAGTGAACTTCAAAATCAATTAAATACTATCCAGAGTCTGAGTGAGCCAAAAATATATTCACTTTAGGAAAAAGTCTATATCCTTAGATGTGAGTGATTCTCTGTGAACATTTTATTCACA---- i macNem1.NW_012011022v1 C 0 I 2 s cerAty1.NW_012002843v1 1136801 289 + 25348628 AACCAATAAATCA-----------------ATTATTA------AACCTTGCTGACTTAGACTTAAATCTGCTTAATTTAGTCATATATCTACCTATAGCATAGGAATTCCAACAGGGGTTGAAAGTAGAGTTGGCAAGCATTTCCTTTCTCT-TCTGGGACAGTAATTCTTACTACCAACTCTGATTCTGACCAGTGAACTTCAAAATCAATTAAATACTATCCAGAGTCTGAGTGAGCCAAAAATATATTCACTTTAGGAAAAAGTCTATATCCTTAGATGTGAGTGATTCTCTGTGAACATTTTATTCACA---- i cerAty1.NW_012002843v1 C 0 I 2 s chlSab2.chr27 5147570 289 + 48547382 AACCAATAAATCA-----------------ATTATTA------AACCTTGCTGACTTAGACTTAAAACTGTTTAATTTAGTCATATCTTTACCTATAGCATAGGAATTCCAACAGGGGTTGAAAGTAGAGTTGGCAAGCATTTCCTTTCTCT-TCTGGGACAGTAATTCTTACTACCAACTCTGATTCTGACCAGTGAACTTCAAAATCAATTAAATACTATCCAGAGTCTGAGTGAGCCAAAAATAGATTCACTTTAGGAAAAAGTCTATATCCTTAGATGTGAGTGATTCTCTGTGAACATTTTATTCACA---- i chlSab2.chr27 C 0 I 2 s manLeu1.NW_012102858v1 50270 289 + 130402 AACCAATAAATCA-----------------ATTATTA------AACCTTGCTGACTTAGACTTAAATCTGCTTAATTTAGTCATATCTCTACCTATAGCATAGGAATTCCAACAGGGGTTGAAAGTAGAGTTGGCAAGCATTTCCTTTCTCT-TCTGGGACAGTAATTCTTACTACCAACTCTGATTCTGACCAGTGAACTTCAAAATCAATTAAATACTATCCAGAGTCTGAGTGAGCCAAAAATATATTCACTTTAGGAAAAAGTCTATATCCTTAGATGTGAGTGATTCTCTGTGAACATTTTATTCACA---- i manLeu1.NW_012102858v1 C 0 I 2 s colAng1.NW_012120821v1 4189109 288 + 12320365 AACCAATAAATCA-----------------ATTATTA------AACCTTGTTGACTTAGACTTAAAACTGCTTAATTTAGTCATATCTCTACCTACAGCATAGGGA-TCTAACAGGGATTGAAAGTAGAGTTGGCAAGCATTTCCTTTCTCT-TCTGGGACAATAATTCTTACTACCAACTCTGATTCTGACCAGTGAACTTCAAAATCAATTAAACACTATCCAGAGTCTGAGTGAGCCAAAAATAGATTCACTTTAGGAAAAAGTCTATATCCTTAGACGTGAGTGATTCTCTGTAAACATTTTATTCACA---- i colAng1.NW_012120821v1 C 0 I 2 s calJac3.chr3 145651130 289 + 190850796 AACCAGTCAATCA-----------------GTAATTA------AACCTTGCTGGCTTAGACTTAAAACTGCTTACTTTATTCATATCTGTACCCACAGCATAGGGATTCCAACAAGCATTTAAAGTAGAGTTGGCAAGCATTTCCATTCTCT-TCTGGGACAATAATTATTACTACCAACTCTGATTCTGACCAGTGAACTTCAAAATAAATTAAACACGATCCAGAATCTGAGTGAGCCAAAAATAGTTTCACTTTAGGAAAAAGTCTATATCCTTAGATTTCAGTGACTCTCTGTGAACATTTTATTCTCT---- i calJac3.chr3 C 0 I 20 s saiBol1.JH378162 14561977 289 + 15139346 AACCAGTCAATCA-----------------GTAATTA------AACCTTGCTGTCTTAGACTTAAAACTGCTTAATTTATTCCTATCTGTACCCACAGCATAGGGATTCCAACGAGCATTTAGAGTAGACTTGGCAAGCATTTCCATTCTCT-TCTGAGACAATAATTATTACTACCAACCCTGATTCTGACCAGTGAACTTCAAAATCAATTAAACACTACCCAGAATCTGAGTGAACCAAAAAAAGTTTCACTTTAGGAAAAAGTCTATATCCTTAGATGTGAGTGGTTCTATGTGAACATTTTATTCTCT---- i saiBol1.JH378162 C 0 I 20 s cebCap1.NW_016107603v1 387879 289 + 3802414 AACCAGTCAATCA-----------------GTAATTA------AACCTTGCTGGCTTACACTTAAAACTGCTTAATTTATTCATATATGTACCCACAGCATAGGGATTCCAACAAGCATTTAAAGTAGAGTTGGCAAGCATTTCCGTTCTCT-TCTGGGACAATAATTATTACTACCAACCCTGATTCTGACCAGTGAACTTCAAAATCAATTAAACACTATCCAGAATCTGAGTGAGCCAAAAATAGTTTCACTTTAAGAAAAAGTCTATATCCTTAGATTTGAGTGATTCTCTGTGAACATTTTATTCTCT---- i cebCap1.NW_016107603v1 C 0 I 20 s aotNan1.NW_018493494v1 9746999 289 + 11631747 AACCAGTCAATCA-----------------GTAATTA------AACCTTGCTGGCTTAGACTTAAAACCGCTTAATTTATTCATATCTGTACCCACAGCACAGGGATTCCAACAAGCATTTAAAGTAGAGTTGGCAAGCATTTCCATTCTCT-TCTGCGACAATAATTATTACTACCAACGCTGATTCTGACCAGTGAACTTCAAAATCAATTAAACACTATGCAGAATCTGAGTGAGCCAAAAATAGTTTCACTTTAGGAAAAAGTCTATATCCTTAGATTTGAGTGATTCTCTGTGAACATTTTATTCTCT---- i aotNan1.NW_018493494v1 C 0 I 20 s canFam3.chr13 21696345 279 - 63241923 AATCAATCAGTCA-----------------ATGATTCTGATTTAGACTCACTGGTTTAGTCTCAAAATTGCTTAATATAGTCATAACTCTACCCACAACATA-AAATTCC-ACTGGGTTGGACAACAGAGAACTCAAGCATTTCCAGTCTCTCCCCAGGATGATCGTGCTGACTAGCTACCCTGATTCTTTCTAGTGAATGCTAAA-----TAAAACGCTAGCCAAAGTCCGGGTAAGCCAAAA--AGTTTCTCCTTAGGAAAA--TCTATATTCTCAGGCTCAGTTAAC------TGAAAATTGTATACAGA---- i canFam3.chr13 I 3809 I 2 s dasNov3.JH575793 104886 303 + 255898 AATCAATAAATCAGCCAATAAATCACTAATATAATTA------AGACTCACTGA--TGGTCTTGAAGATGTTTAATTTAATCATATCTCTTCTCACAGTACAGGGATCCCAACTGGGATTGAGAATAGAGTTGGCAA--AATTCCATTCTCTCCCTAAGACAATAATTATCATTACTTATCCTGATTCTGCCTAGTGAACCTCAAA-TCAATTAAATACTAACCAAAGTCAAGGTAAGACAAAAATAGTTTCACCTTAGGAAAGA-TTTGTATCCTTAAATTTGGGTAATCCTCTGTGAAAACTTTATACCCA--TA i dasNov3.JH575793 C 0 C 0 a score=15561.000000 s hg38.chr9_KI270719v1_random 128851 1 + 176845 T s panTro5.chr4 86961165 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737511 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22090 1 + 36344 T i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531402 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374267 1 - 190429646 T i rheMac8.chr5 I 2 C 0 s macFas5.chr5 144400233 1 - 189454096 T i macFas5.chr5 I 2 C 0 s macNem1.NW_012011022v1 3514638 1 + 39453387 T i macNem1.NW_012011022v1 I 2 C 0 s cerAty1.NW_012002843v1 1137092 1 + 25348628 T i cerAty1.NW_012002843v1 I 2 C 0 s chlSab2.chr27 5147861 1 + 48547382 T i chlSab2.chr27 I 2 C 0 s manLeu1.NW_012102858v1 50561 1 + 130402 T i manLeu1.NW_012102858v1 I 2 C 0 s colAng1.NW_012120821v1 4189399 1 + 12320365 T i colAng1.NW_012120821v1 I 2 C 0 s rhiRox1.KN299796v1 656111 1 - 966548 T i rhiRox1.KN299796v1 N 0 N 0 s calJac3.chr3 145651439 1 + 190850796 T i calJac3.chr3 I 20 C 0 s saiBol1.JH378162 14562286 1 + 15139346 T i saiBol1.JH378162 I 20 C 0 s cebCap1.NW_016107603v1 388188 1 + 3802414 T i cebCap1.NW_016107603v1 I 20 C 0 s aotNan1.NW_018493494v1 9747308 1 + 11631747 T i aotNan1.NW_018493494v1 I 20 C 0 s canFam3.chr13 21696626 1 - 63241923 T i canFam3.chr13 I 2 C 0 s dasNov3.JH575793 105189 1 + 255898 T i dasNov3.JH575793 C 0 C 0 a score=897052.000000 s hg38.chr9_KI270719v1_random 128852 90 + 176845 TAATATATTTAAAGAAAATCTTTCTGAATTGGTGTGTTTTCTTTAGTTTGT-ATTCTGATACTTTAATGCTAAAAGCTCTTGATTTTAAGT- s panTro5.chr4 86961166 90 + 194502333 TAGTGTATTTAAAGAAAATCTTTCTGAACTGATGAGTTTTCCTAATTTTTT-ATTCTGATATTTTGATGCTAAAAGCTCTTAATTTTAAGT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737512 90 + 195804263 TAGTGTATTTAAAGAAAATCTTTCTGAACTGATGAGTTTTCCTAATTTTTT-ATTCTGATATTTTGATGCTAAAAGCTCTTAATTTTAAGT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22091 90 + 36344 TAATATATTTAAAGAAAATCTTTCTGAATTGCTGTGTTTTCTTTAGTTTGT-ATTCTGATACTTTGATGCTAAAAGCTCTTGATTTTAAGT- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531403 91 + 85365473 CAGTATATTTAAAGAAAATCTTTCTGAATTGATGTGTTTTCCTTATTTTTTAATTCTGATATTTTGATGCTAAAAGCTCTTAATTTTAAGT- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374268 90 - 190429646 TAGCATACTTAAAGAAAATCTTACTGAATTGATGTGTTTTCTTTATTTTTT-ATTCTGATATTTTGATGCTAAAAGCTCTTGATTTTAAAT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144400234 90 - 189454096 TAGCATACTTAAAGAAAATCTTACTGAATTGATGTGTTTTCTTTATTTTTT-ATTCTGATATTTTGATGCTAAAAGCTCTTGATTTTAAAT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3514639 90 + 39453387 TAGCATACTTAAAGAAAATCTTACTGAATTGATGTGTTTTCTTTATTTTTT-ATTCTGATATTTTGATGCTAAAAGCTCTTGATTTTAAAT- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1137093 90 + 25348628 TAGCATACTTAAAGAAAATCTTACTGAATTGATGTGTTTTCTTTATTTTTT-ATTCTGATATTTTGATGCTAAAAGCTCTTGATTTTAAAT- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5147862 85 + 48547382 TAGCATACTTAAAGAAAATCTTACTGAATTGATGTG-----TTTACTTTTT-ATTCTGATATTTTGATGCTAAAAGCCCTTGATTTTAAAT- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 50562 90 + 130402 TAGCATACTTAAAGAAAATCTTACTGAATTGATGTGTTTTCTTTATTTTTT-ATTCTGACATTTTGATGCTAAAAGCTCTTGATTTTAAAT- i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4189400 90 + 12320365 TAGCATACTTAAAGAAAATATTTCTGAATTGATGTGTTTTCTTTATTTTTT-ATTCTGATATTTTAATGCTAAAAGCTCTTGATTTTAAAT- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145651440 86 + 190850796 TAGTATATTTAAAGAAAAA----CTGAATTGATGGATTATCTTTAGTTTTT-ATTCTGATACTTTGATGCTAAAAGCTCTTGATTTTAAGT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14562287 86 + 15139346 TAGTATATTTAAAGAAAAT----CTGAATTGATGGATTTTCTTTAGTTTTT-ATTCTGATACTTTAATGTAAAAAGCCCTTGACTTTAAGT- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 388189 86 + 3802414 TAGCATATTTAAAGAAAAT----CTGAATTGCTGTATTTTCTTTAGTTTTT-ATTCTGATACTTTGATGCTAAAAGCTCTTGGTTTTAAGT- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9747309 86 + 11631747 TAGCATATTTAAAGAAAAT----CTGAATTGATGGATTTTCTTTAGTTTTT-ATTCTGATACTTTGATGCTAAAAGCTCTTGATTTTAAAT- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21696627 87 - 63241923 TAGTATTGCTAAGCACAATATTGAGGAATTGATAGATTTTC-TGAGTATCT-ATTTTGATACTCTGATGCTAAAA--TCTTGCTTTTAACA- i canFam3.chr13 C 0 I 2 s dasNov3.JH575793 105190 89 + 255898 TAGTTTTATTAAATAAAACATCCCCAAATTG--GTGTTTTCTTTAGTTTCT-TTTTTGATATTTGGATGCTAAAAGCTCTTGCATTTAATGT i dasNov3.JH575793 C 0 C 0 a score=51326.000000 s hg38.chr9_KI270719v1_random 128942 5 + 176845 -TTTCA s panTro5.chr4 86961256 5 + 194502333 -TTTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737602 5 + 195804263 -TTTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22181 5 + 36344 -TTTCA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531494 5 + 85365473 -TTTCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374358 5 - 190429646 -TTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144400324 5 - 189454096 -TTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3514729 5 + 39453387 -TTTCA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1137183 5 + 25348628 -TTTCA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5147947 5 + 48547382 -TTTCA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 50652 5 + 130402 -TTTCA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4189490 5 + 12320365 -TTTCG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145651526 5 + 190850796 -TTTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14562373 5 + 15139346 -TTTTA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 388275 5 + 3802414 -TTTTA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9747395 5 + 11631747 -TTTTA i aotNan1.NW_018493494v1 C 0 C 0 s tarSyr2.KE948818v1 688071 5 + 1045278 -TTTTG i tarSyr2.KE948818v1 N 0 I 4638 s canFam3.chr13 21696716 5 - 63241923 -TATCA i canFam3.chr13 I 2 C 0 s dasNov3.JH575793 105279 5 + 255898 TTTTT- i dasNov3.JH575793 C 0 C 0 a score=30680.000000 s hg38.chr9_KI270719v1_random 128947 20 + 176845 --------------------T-GGAGGG-GCTATCTAC---ATAA------------------------------------ s panTro5.chr4 86961261 15 + 194502333 --------------------T-GGGAGG------CTAC---CTAA------------------------------------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737607 15 + 195804263 --------------------T-GGTAGG------CTAC---CTAA------------------------------------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22186 23 + 36344 --------------------T-GGAGGG-GCTATCTACATAATAA------------------------------------ i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531499 15 + 85365473 --------------------T-GGGAAG------TTAT---CTAA------------------------------------ i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374363 21 - 190429646 --------------------T-GAGAGGAGCTATCTAC---ATAA------------------------------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144400329 21 - 189454096 --------------------T-GAGAGGAGCTATCTAC---ATAA------------------------------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3514734 21 + 39453387 --------------------T-GAGAGGAGCTATCTAC---ATAA------------------------------------ i macNem1.NW_012011022v1 C 0 I 51 s cerAty1.NW_012002843v1 1137188 21 + 25348628 --------------------T-GGGGGGAGCTATCTAC---ATAA------------------------------------ i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5147952 22 + 48547382 --------------------TGGGGGGGAGCtatctac---ataa------------------------------------ i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 50657 21 + 130402 --------------------T-GGGGGGAGCtatctac---ataa------------------------------------ i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4189495 19 + 12320365 --------------------T---GGGGAGCTATCTAC---ATAA------------------------------------ i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145651531 15 + 190850796 --------------------T-TGGTGG------CTAT---Ctaa------------------------------------ i calJac3.chr3 C 0 I 3 s saiBol1.JH378162 14562378 15 + 15139346 --------------------T-TGGTGG------CTAT---Ctaa------------------------------------ i saiBol1.JH378162 C 0 I 3 s cebCap1.NW_016107603v1 388280 15 + 3802414 --------------------T-TGGTGG------CTAT---CTAA------------------------------------ i cebCap1.NW_016107603v1 C 0 I 3 s aotNan1.NW_018493494v1 9747400 19 + 11631747 --------------------T-TGGTGG--CTATCTAT---CTAA------------------------------------ i aotNan1.NW_018493494v1 C 0 I 3 s canFam3.chr13 21696721 21 - 63241923 --------------------T-TATTAGGGATATCTAT---ATCA------------------------------------ i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 105284 77 + 255898 TTAAAATTTTCTGTAATATCT-GTATGATAATGCCTAT---CCAATTTGGAATGAATTTGTTTCAAGGAATGAAATAAGAA i dasNov3.JH575793 C 0 C 0 e tarSyr2.KE948818v1 688076 4638 + 1045278 I a score=12376.000000 s hg38.chr9_KI270719v1_random 128967 1 + 176845 T s panTro5.chr4 86961276 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737622 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22209 1 + 36344 T i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531514 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374384 1 - 190429646 T i rheMac8.chr5 C 0 I 60 s macFas5.chr5 144400350 1 - 189454096 T i macFas5.chr5 C 0 I 5 s cerAty1.NW_012002843v1 1137209 1 + 25348628 T i cerAty1.NW_012002843v1 C 0 I 38 s chlSab2.chr27 5147974 1 + 48547382 t i chlSab2.chr27 C 0 I 5 s manLeu1.NW_012102858v1 50678 1 + 130402 t i manLeu1.NW_012102858v1 C 0 I 32 s colAng1.NW_012120821v1 4189514 1 + 12320365 T i colAng1.NW_012120821v1 C 0 I 3 s calJac3.chr3 145651549 1 + 190850796 t i calJac3.chr3 I 3 C 0 s saiBol1.JH378162 14562396 1 + 15139346 t i saiBol1.JH378162 I 3 C 0 s cebCap1.NW_016107603v1 388298 1 + 3802414 T i cebCap1.NW_016107603v1 I 3 C 0 s aotNan1.NW_018493494v1 9747422 1 + 11631747 T i aotNan1.NW_018493494v1 I 3 C 0 s canFam3.chr13 21696742 1 - 63241923 T i canFam3.chr13 C 0 I 19 s dasNov3.JH575793 105361 1 + 255898 T i dasNov3.JH575793 C 0 C 0 e tarSyr2.KE948818v1 688076 4638 + 1045278 I e macNem1.NW_012011022v1 3514755 51 + 39453387 I a score=17860.000000 s hg38.chr9_KI270719v1_random 128968 18 + 176845 ----------TTTTATACAT-------------------------------CAT-----------------------TATAT s panTro5.chr4 86961277 17 + 194502333 ----------TTTTATATAT--------------------------------AT-----------------------TATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737623 17 + 195804263 ----------TTTTATATAT--------------------------------AT-----------------------TATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22210 18 + 36344 ----------TTTTATACAT-------------------------------CAT-----------------------TATAT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531515 17 + 85365473 ----------TTTTATATAT--------------------------------AT-----------------------TATAT i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144400356 40 - 189454096 ----------atatatatat--------------------------------atatatatatatatatatatatatatatat i macFas5.chr5 I 5 I 7 s chlSab2.chr27 5147980 17 + 48547382 ----------atatatatat--------------------------------at-----------------------tatat i chlSab2.chr27 I 5 C 0 s colAng1.NW_012120821v1 4189518 17 + 12320365 ----------TTTTATATAT--------------------------------AT-----------------------TATAT i colAng1.NW_012120821v1 I 3 C 0 s calJac3.chr3 145651550 15 + 190850796 ----------ttttatatat---------------------------------------------------------tatat i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14562397 15 + 15139346 ----------ttttatatat---------------------------------------------------------tatat i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 388299 41 + 3802414 ----------TTTtatatat-------------------------------tatatatatatatatatatatatatatatat i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9747423 15 + 11631747 ----------TTTTATATAT---------------------------------------------------------TATAT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21696762 49 - 63241923 ----------TTAAATGTGTTGTAAGGAGTGAAATAAGATTCCCCATCAACCAT-----------------------TTTAT i canFam3.chr13 I 19 C 0 s dasNov3.JH575793 105362 18 + 255898 TCCCATTGGCCTTTATAG---------------------------------------------------------------- i dasNov3.JH575793 C 0 C 0 e tarSyr2.KE948818v1 688076 4638 + 1045278 I e manLeu1.NW_012102858v1 50679 32 + 130402 I e cerAty1.NW_012002843v1 1137210 38 + 25348628 I e macNem1.NW_012011022v1 3514755 51 + 39453387 I e rheMac8.chr5 145374385 60 - 190429646 I a score=54429.000000 s hg38.chr9_KI270719v1_random 128986 7 + 176845 GCATCAA s panTro5.chr4 86961294 7 + 194502333 GCATCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737640 7 + 195804263 GCATCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22228 7 + 36344 GCATCAA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531532 7 + 85365473 GCATCAG i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144400403 7 - 189454096 GCATCAG i macFas5.chr5 I 7 I 1 s cerAty1.NW_012002843v1 1137248 7 + 25348628 GCATCAG i cerAty1.NW_012002843v1 I 38 I 1 s chlSab2.chr27 5147997 7 + 48547382 GCATCAG i chlSab2.chr27 C 0 I 1 s manLeu1.NW_012102858v1 50711 7 + 130402 GCATCAG i manLeu1.NW_012102858v1 I 32 I 1 s colAng1.NW_012120821v1 4189535 7 + 12320365 GCATCAG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145651565 7 + 190850796 aCATCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14562412 7 + 15139346 aCATCAG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 388340 7 + 3802414 atatCAG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9747438 7 + 11631747 ACATCAG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21696811 7 - 63241923 GTTTTAG i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 105380 7 + 255898 GATTTAG i dasNov3.JH575793 C 0 C 0 e tarSyr2.KE948818v1 688076 4638 + 1045278 I e macNem1.NW_012011022v1 3514755 51 + 39453387 I e rheMac8.chr5 145374385 60 - 190429646 I a score=15561.000000 s hg38.chr9_KI270719v1_random 128993 1 + 176845 T s panTro5.chr4 86961301 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737647 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22235 1 + 36344 T i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531539 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374445 1 - 190429646 T i rheMac8.chr5 I 60 C 0 s macFas5.chr5 144400411 1 - 189454096 T i macFas5.chr5 I 1 C 0 s macNem1.NW_012011022v1 3514806 1 + 39453387 T i macNem1.NW_012011022v1 I 51 C 0 s cerAty1.NW_012002843v1 1137256 1 + 25348628 T i cerAty1.NW_012002843v1 I 1 C 0 s chlSab2.chr27 5148005 1 + 48547382 T i chlSab2.chr27 I 1 C 0 s manLeu1.NW_012102858v1 50719 1 + 130402 T i manLeu1.NW_012102858v1 I 1 C 0 s colAng1.NW_012120821v1 4189542 1 + 12320365 T i colAng1.NW_012120821v1 C 0 I 1 s rhiBie1.NW_016814732v1 71468 1 + 665040 T i rhiBie1.NW_016814732v1 N 0 I 4264 s calJac3.chr3 145651572 1 + 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14562419 1 + 15139346 T i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 388347 1 + 3802414 T i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9747445 1 + 11631747 T i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21696818 1 - 63241923 T i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 105387 1 + 255898 T i dasNov3.JH575793 C 0 C 0 e tarSyr2.KE948818v1 688076 4638 + 1045278 I a score=2442022.000000 s hg38.chr9_KI270719v1_random 128994 216 + 176845 AATTAAAAAGGAGTAGAAATTTTTTCACTAATTGAGAAATATTATAGACCTAACAAAATGAGGGCAAACTATAAGCAATTTGGGGAAACTATAAGGATGTAATTAAATAGTCACTGTTTTTAGAAACCATTAACTGCATATTGAAATCTTAACACTTGTTGGGAAAACGAGGTGGTAAATCAACTTGTCAGCATGAGT-ACTAAATAAAACAAAATA s panTro5.chr4 86961302 216 + 194502333 AATTAGAAAGGAATAGAAATTTTTACCCTAATTGAGAAATACTATAGACCTAACTAAATGAGGGTAAACTATAAGCAATTTGGGGAAACTATAAGGATGTGATTAAATAGTCACTGTTTTCAGAAACCCTTAACTGCATATTGGAAACTTGACACTTGTTGGGAAAATGAGGTAGTAAGTCAACTTGTCAGTGTGAGT-ACTAAAGAAAACAAAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737648 216 + 195804263 AATTAGAAAGGAATAGAAATTTTTACCCTAATTGAGAAATACTATAGACCTAACTAAATGAGGGTAAACTATAAGCAATTTGGGGAAACTATAAGGATGTGATTAAATAGTCACTGTTTTCAGAAACCCTTAACTGCATATTGGAAACTTGACACTTGTTGGGAAAATGAGGTAGTAAGTCAACTTGTCAGTGTGAGT-ACTAAAGAAAACAAAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22236 216 + 36344 AATTAAAAAGGAGTAGAAATTTTTACACCAATTGAGAAATATTATAGACCTAACGAAATGAGGGCAAACTATAAGCAATTTGGGGAAACTATAAGGATGTAATTAAATAGTCACTGTTTTTAGAAACCATTAACTGCATATTGAAATCTTGACACTTGTTGGGAAAACGAGGTGGTAAATCAACTTGTCAGCGTGAGT-ACTAAATAAAACAAAATA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531540 216 + 85365473 AATTAGAAAGGAATAGAAATTTTTACGCTAATTGAGAAATATTATAGACCTAACTAAATGAGGGTAAACTATAAGCAATTTGGGGAAACTATAAGGATGTAATTAAATAGTCACTGTTTTTGGAAACCCTTAACTGCATATTGGAATCTTGACACTTGTTGGGAAAATGAGGTAGTAAACCAACTTGTCAGTGTGAGT-ACTAAAGAAAACAAAATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374446 216 - 190429646 AATTAGAAAGGAATAGAAATTTTTACTGTAATTGAGAAATATTATAGACCTAACTAAATGAGGGCAAACTACAAGCAATTTGGGGAAACTATAAGGATGTAATTAAATAGTCATTGTTTTTAGAAATCCTTAACTGCATATTGAAATCTTGCCACTTGTTGGGGAAATGAGGGGGTAAATCAACTTGTCAGTGTGAGT-ACTAAAGAAAACAAAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144400412 216 - 189454096 AATTAGAAAGGAATAGAAATTTTTACTGTAATTGAGAAATATTATAGACCTAACTAAATGAGGGCAAACTACAAGCAATTTGGGGAAACTATAAGGATGTAATTAAATAGTCACTGTTTTTAGAAATCCTTAACTGCATATTGAAATCTTGCCACTTGTTGGGGAAATGAGGGGGTAAATCAACTTGTCAGTGTGAGT-ACTAAAGAAAACAAAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3514807 216 + 39453387 AATTAGAAAGGAATAGAAATTTTTACTGTAATTGAGAAATATTATAGACCTAACTAAATGAGGGCAAACTACAAGCAATTTGGGGAAACTATAAGGATGTAATTAAATAGTCACTGTTTTTAGAAATCCTTAACTGCATATTGAAATCTTGCCACTTGTTGGGGAAATGAGGGGGTAAATCAACTTGTCAGTGTGAGT-ACTAAAGAAAACAAAATA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1137257 216 + 25348628 AATTAGAAAGGATTAGAAATTTTTACTCTAATTGAGAAATATTATAGACCTAACTAAATGAGGGCAAACTACAAGCGATTTGGGGAAACTATAAGGATGTAATTAAATAGTCACTGTTTTTAGAAATCCTTAACTGCATATTGAAATCTTGCCACTTGTTGGGGAAATGAGGGGGTAAATCAACTTGTCAGTGTGAGT-ACTAAAGAAAACAAAATA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5148006 212 + 48547382 AATTAAAAAGGAATAGAAATTGTTACTCTAATTGAGAAATATTATAGACCTAACTAAATGAGGGCAAACTACAAGTGATTTGGGGAAACTATAAGGATGTAAT----TAGTCACTGTTTTTAGAAATCCTTAACTGCGTATTGAAATCTTACCACTTGTTGGGGAAATGAGGAGGTAAATCAACTTGTCTGTGTGAGT-ACTAAAGAAAACAAAATA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 50720 216 + 130402 AATTAGAAAGGAATAGAAATTTTTACTCTAATTGAGAAATATTATAGACCTAACTAAATGAGGGCAAACTACAAGCGATTTGGGGAAACTATAAGGATGTAATTAAATAGTCACTGTTTTTAGAAATCCTTAACTGCATATTGAAATCTTGCCACTTGTTGGGGAAATGAGGGGATAAATCAGCTTGTCAGTGTGAGT-ACTAAAGAAAACAAAATA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4189544 215 + 12320365 AATTAGAAAGGAATAGAAATATTTACTCTAATTGAGAAATATTATAGACCTAACTAAATGAGGGCAAACTACAAGCAATTTGAGGAAACTATAAGGATGTAATTAAATAGTCACTGTTTTTAGAAATCCTTAACTGCATATTGAAATCTTGACACTTGTTGGGAAAATGAGG-GGTAAATCGACTTGTCAGTGTGAGT-GCTAAAGAAAACAAAATA i colAng1.NW_012120821v1 I 1 C 0 s calJac3.chr3 145651573 214 + 190850796 AATTAAAAAGGAATAGAAATTTTTATCCTAATTGAGAAATATCATAGGCCTAACTAAATGAGGACAAACTATAAGAAATTTGGGGAAACTACAAGGATACAGTTAAATAGTCAC--TTTTTAAAAACCATTAACTGAATATTGGAATTGTGACATTTGTTGGGAAAATGAGGTAGTAAGTCAACTTGTCAGTGTGAGT-ACTAAAGAAAATAAAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14562420 216 + 15139346 AATTAAAAAGGAATAGAAACTTTTATCCCGATTGAGAAATATTATAGGCCTAACTAAATGAGGACAAACTATAAGGAATTTGAGGAAACTACAAGGATACAGTTAAATAGTCACTGTTTTTAGAAACCATTAACTGAATATTGGAATCTTGACGTTTGTTGGGAAAATGAGGTGGTAAGTCAACTTGACAGTGTGAGT-ACTGAAGAAAATAATGTA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 388348 216 + 3802414 AATTAAAAAGGAATAGAAATTTTTATCCTAATTGAGAAGTACTATAGGCCTAACTAAATGAGGACAAACTATAAGGAATTTGGGGAAGCTGCAAGGATACAGTTAAATAGTCATTGTTTTTAGAAACCATTAACTAAATATTGGAATCTTGACATTTGTAGGGAAAATGAGGTGGTAAGTCAACTTGTCAGTGTGAGT-ACTAAAGAAAATAAAATA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9747446 216 + 11631747 AATTAAAAAGGAATAGAAATTTTTATCCTAATTGAGAAATATTATAGGCCTAACTAAATGAGGACAAACTATAAGGAATTTGGGGAAACTATAAGGATACAGTTAAATAGTCACTGTTTTTAGAAATCATTAACTGAATATTGGAATCTTGACATTTGTTGGGAAAATGAGGTGGTAAGTCATCTTGTCAGTGTGAGT-ACTAAAGAAAATAAAAta i aotNan1.NW_018493494v1 C 0 I 338 s canFam3.chr13 21696819 210 - 63241923 AATTAGAAAGGAATATAAATTTTCATCCTGGTTGAGAAATGTTCTAACTCTATTTAAATGAGGACAAAT----AAAAACTGGTAGAAACTATAAGGATGTAATTAAATGGACAGTGCTTTTAGAAACAATTAAATGCATATTGGAATCCTGACACTTGTGGTAAGGATGAGATGGTAAATCAACTTGTCAG--TGAGTAACTAATGAAAATAAACA- i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 105388 211 + 255898 AATTAGAAAGGAATAGAAATTTTCATCTTAATTGAGAAATGTTCTGGCCCTATCTAAATGAGGGC---TCATAAGAACTT--GGGAAACTATAATGATGTAATTAAGTTGGTACTGTTTTTAGAAACAATTAAATGCATAGTGTAATCTTGACACTTATTGTGAAAATGAGGAGGTAAATCAAGTTGGCAGTGTGAGT-ACTAATGGAAGTAAAGCA i dasNov3.JH575793 C 0 C 0 e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I a score=236353.000000 s hg38.chr9_KI270719v1_random 129210 15 + 176845 TGGTTAAG---------------TTCAGAT s panTro5.chr4 86961518 30 + 194502333 TGGTTAAGAGGCTCCCTTTAAAATTCAGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737864 30 + 195804263 TGGTTAAGAGGCTCCCTTTAAAATTCAGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22452 15 + 36344 TGGTTAAG---------------TTCAGAT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531756 30 + 85365473 TGGTTAAGAGGCTCCCTTTAAAATTCAGAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374662 30 - 190429646 TGGTTAAGAGGGTCCCTGTAAAATTCAGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144400628 30 - 189454096 TGGTTAAGAGGGTCCCTGTAAAATTCAGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3515023 30 + 39453387 TGGTTAAGAGGGTCCCTGTAAAATTCAAAT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1137473 30 + 25348628 TGGTTAAGAGGGTCCCTGTAAAATTCAGAT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5148218 30 + 48547382 TAGTTAAGAGGGTCCCTGTAAAATTCAGAT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 50936 30 + 130402 TGGTTAAGAGGATCCCTGTAAAATTCAGAT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4189759 30 + 12320365 TGGTTAAGAGGGTCCCTGTAAAATTCAGAT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145651787 30 + 190850796 TGGTTAAGAGGGCCCGTTTAAAATTTGGAG i calJac3.chr3 C 0 I 4 s saiBol1.JH378162 14562636 30 + 15139346 TGGTTAAGAGGGCCCGTTTAAAACTCAGAG i saiBol1.JH378162 C 0 I 4 s cebCap1.NW_016107603v1 388564 30 + 3802414 TTGTTAAGAGGGCCCGTTTAAAATTCAGAG i cebCap1.NW_016107603v1 C 0 I 4 s canFam3.chr13 21697029 30 - 63241923 TGGTTACGAGGATTCCTTTAAAATTCAGAT i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 105599 29 + 255898 TGGTAAAGAAAACCCCTTTAAAATT-AGAT i dasNov3.JH575793 C 0 I 6 e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e aotNan1.NW_018493494v1 9747662 338 + 11631747 I a score=525246.000000 s hg38.chr9_KI270719v1_random 129225 51 + 176845 A------GTAGTTCTG----CAATTTCTGATTTTAAATGTTTCTGCAAAATAGTTTATCTG s panTro5.chr4 86961548 55 + 194502333 ACTC--AGTAGTTCTG----CAATTTCTGATTTTAAATGTTTCTGCAAAATAGTTTATCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737894 55 + 195804263 ACTC--AGTAGTTCTG----CAATTTCTGATTTTAAATGTTTCTGCAAAATAGTTTATCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22467 51 + 36344 A------GTAGTTCTG----CAATTTCTGATTTTAAATGTTTCTGCAAAATAGTTTATCTG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531786 55 + 85365473 ACTC--AGTAGTATTG----CAATTTCTGAAGTTAAATGTATCTGCAAAATAGTTTATCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374692 55 - 190429646 ACTC--AGTAGTTCTG----TGATTTCTGATTTTAAATGTTTCTACAAAATAGTTTATCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144400658 55 - 189454096 ACTC--AGTAGTTCTG----TGATTTCTGATTTTAAATGTTTCTACAAAATAGTTTATCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3515053 55 + 39453387 ACTC--AGTAGTTCTG----TGATTTCTGATTTTAAATATTTCTACAAAATAGTTTATCTG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1137503 55 + 25348628 ACTC--AGTAGTTCTG----CGATTTCTGATTTTAAATGTTTCTACAAAATAGTTTATCTG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5148248 55 + 48547382 ACTC--AGTAGTTCTG----CGATTTCTGATTTTAAATGTTTCTACAAAATAGTTTATCTG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 50966 55 + 130402 ACTC--AGTAGTTCTG----CGATTTCTGATTTTAAATGTTTCTACAAAATAGTTTATCTG i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4189789 55 + 12320365 ACTC--AGTAGTTCTG----CGATTTCTGATTTTAAATGTCTCTGCAAAATAGTTTATCTG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145651821 37 + 190850796 ------AGTAGT------------------TTTTAAATGTTTCTACAAAATGGTTTATCGG i calJac3.chr3 I 4 C 0 s saiBol1.JH378162 14562670 51 + 15139346 ------AGTAGTTCTA----CAATTTTTGATTTTAAATGTTTCTGTAAAATAGTTTATCTG i saiBol1.JH378162 I 4 C 0 s cebCap1.NW_016107603v1 388598 51 + 3802414 ------AGTAGTTCTA----CAGTTTTTTATTTTAAATGTTTCTGCAAAATAGTTTATCTG i cebCap1.NW_016107603v1 I 4 C 0 s aotNan1.NW_018493494v1 9748000 51 + 11631747 ------AGTAGTTCTA----CAATTTTTGATTTTAAATGTTTCTGCAAAATAGTTTATCTG i aotNan1.NW_018493494v1 I 338 I 26 s canFam3.chr13 21697059 59 - 63241923 AATCGGAGGAGTTGTGCAATCAATCTCTGAGTTTAAATG--TCTGCAAAATAGTTTTTCAG i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 105634 51 + 255898 ------AGTAGTTATG----CAGTTTCTTAGTTTTCATGCCTTTGCAGAATGGATTATATA i dasNov3.JH575793 I 6 C 0 e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I a score=261438.000000 s hg38.chr9_KI270719v1_random 129276 46 + 176845 AACGATTAAACTAT--TATTCTGTGTTCACCAACCATTAAGAAAATCT s panTro5.chr4 86961603 46 + 194502333 AATCATTAAACTAT--TATTCCATGTTCAGCAACCATAGAGAAAATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737949 46 + 195804263 AATCATTAAACTAT--TATTCCATGTTCAGCAACCATAGAGAAAATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22518 46 + 36344 AATGATTAAACTAT--TATTCCGTGTTCACCAACCATTAAGAAAATCT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531841 46 + 85365473 AATCATTAAACTAT--TATGCCGTGTTCAGCAACCATAGAGAAAATAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374747 46 - 190429646 AATCATTAAACTAT--TAGGCCATGCTCAGCAACCACAGAGAAAACCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144400713 46 - 189454096 AATCATTAAACTAT--TAGGCCATGCTCAGCAACCACAGAGAAAATCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3515108 46 + 39453387 AATCATTAAACTAT--TAGGCCATGCTCAGCAACCACAGAGAAAATCT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1137558 46 + 25348628 AATCATTAAACTAT--TAGGCCATGCTCAGCAACCACAGAGAAAATCT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5148303 46 + 48547382 AATCATTAAACTAT--TATGCCATGCTCAGCAACCACAGAGAAAATCT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 51021 46 + 130402 AATCATTAAACTAT--TAGGCCATGCTCAGCAACCACAGAGAAAATCT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4189844 46 + 12320365 AATCATTAAACTAT--TATGCCATGCTCAGTAACCATAGAGAAAATCT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145651858 26 + 190850796 AATCATTAAAATAG--TTTGCTGTGT--------------GA------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14562721 26 + 15139346 AATCACTAAAATAG--TTTGCTGTGT--------------GA------ i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 388649 26 + 3802414 AATCATTAAAATAG--TTTGCTGTGT--------------GA------ i cebCap1.NW_016107603v1 C 0 C 0 s canFam3.chr13 21697118 41 - 63241923 AATCATTAAACTA-------CCGTGCTGAACAGCAATAAGGAAGATAC i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 105685 48 + 255898 AAATATTAAACTCTGATATTAAATGTTCGCCAATCATGAGGAAAATCT i dasNov3.JH575793 C 0 I 2275 e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e aotNan1.NW_018493494v1 9748051 26 + 11631747 I a score=7891.000000 s hg38.chr9_KI270719v1_random 129322 9 + 176845 GCTCTATGG s panTro5.chr4 86961649 9 + 194502333 GCTGTGTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87737995 9 + 195804263 GCTGTGTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22564 9 + 36344 GCTGTATGG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531887 9 + 85365473 GCTGTGTGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374793 3 - 190429646 GCT------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144400759 3 - 189454096 GCT------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3515154 3 + 39453387 GCT------ i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1137604 3 + 25348628 GCT------ i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5148349 3 + 48547382 GCT------ i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 51067 3 + 130402 GCT------ i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4189890 9 + 12320365 GCTGTGTGG i colAng1.NW_012120821v1 C 0 C 0 s canFam3.chr13 21697159 9 - 63241923 GCTGTGTGG i canFam3.chr13 C 0 C 0 e dasNov3.JH575793 105733 2275 + 255898 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e aotNan1.NW_018493494v1 9748051 26 + 11631747 I e cebCap1.NW_016107603v1 388675 0 + 3802414 C e saiBol1.JH378162 14562747 0 + 15139346 C e calJac3.chr3 145651884 0 + 190850796 C a score=20195.000000 s hg38.chr9_KI270719v1_random 129331 4 + 176845 CCAG s panTro5.chr4 86961658 4 + 194502333 CCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87738004 4 + 195804263 CCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22573 4 + 36344 CCAG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531896 4 + 85365473 CCAG i nomLeu3.chr20 C 0 C 0 s colAng1.NW_012120821v1 4189899 4 + 12320365 CCAG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145651884 4 + 190850796 CCAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14562747 4 + 15139346 CCAG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 388675 4 + 3802414 CCAG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9748077 4 + 11631747 CCAG i aotNan1.NW_018493494v1 I 26 C 0 s canFam3.chr13 21697168 4 - 63241923 CCAG i canFam3.chr13 C 0 C 0 e dasNov3.JH575793 105733 2275 + 255898 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e manLeu1.NW_012102858v1 51070 0 + 130402 C e chlSab2.chr27 5148352 0 + 48547382 C e cerAty1.NW_012002843v1 1137607 0 + 25348628 C e macNem1.NW_012011022v1 3515157 0 + 39453387 C e macFas5.chr5 144400762 0 - 189454096 C e rheMac8.chr5 145374796 0 - 190429646 C a score=5246133.000000 s hg38.chr9_KI270719v1_random 129335 491 + 176845 GTTAAACCTGAAAGTGGTACA-----ATTCAAAACTTGATGTAGGCAATAGGTATGTATAATGTATTTATTCTAATATGAGAGGGTATATCAAAGTAATTTTCTTGGAGCACAGTGTCAAAACAAAGCAATGGGATTTGGCCATGGACATTTCATTATTATCAAAGAGACTTGG-ACACTACCTTAGAGTAATAACTTTATTATTTAACAAAGATGTTTTATAAAAAG----AACAACAAA----ATGAGAGGAA--TAGAAATCA-CGC-AGGTAAAACAGATAA--------T--------CTGATTTTGTGGGTCTCAGAGCAGAGATTAGTGTCT-T----TCAGTTTCAGAGTAAATGACCTCACTGCATTTCTCTGAACTGTCATGGTTGTCACAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTACAAAGTAACAAAGGCAAAATAAC-----C-----TATATGCTCTACCATATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC s panTro5.chr4 86961662 504 + 194502333 GTTAAACCTGAAAGTGCTATG-----ATTCAAAACTTGATATAGGCAATAGGTATGTAAAATGTAGGTATTCTAATATGAGAGGGCATATCGAAGTAATTTTCTTGCAGTACACTGACAAAACAAAGCAATGGGATTTGGCCATGGACATTTCATTATTACCAAACAGACCTGGGACACTACCTTATAGTAATAACTTTAGTATTTAGCAAAGGTGATTTATAAATAGG-ACAACAACAAA----ATGAGAGGAA--TAGAAATCA-TAC-AGATAAAACAGATAAACAGATAAT--------CTGATTTTGTGGGTCTCAGAGCAGAGATTAGTGTTGAT----TCAGTTTCAGACTAAACGACCTCATCGCATTTCTCTGAACTGTCATGATTGTCATAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTTCAAAGTAACAGAGGCAAAATAAC-----C-----TATATGCTCTACCATATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 87738008 504 + 195804263 GTTAAACCTGAAAGTGCTATG-----ATTCAAAACTTGATATAGGCAATAGGTATGTAAAATGTAGGTATTCTAATATGAGAGGGCATATCGAAGTAATTTTCTTGCAGTACACTGACAAAACAAAGCAATGGGATTTGGCCATGGACATTTCATTATTACCAAACAGACCTGGGACACTACCTTATAGTAATAACTTTAGTATTTAGCAAAGGTGATTTATAAATAGG-ACAACAACAAA----ATGAGAGGAA--TAGAAATCA-TAC-AGATAAAACAGATAAACAGATAAT--------CTGATTTTGTGGGTCTCAGAGCAGAGATTAGTGTTGAT----TCAGTTTCAGACTAAACGACCTCATCGCATTTCTCTGAACTGTCATGATTGTCATAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTTCAAAGTAACAGAGGCAAAATAAC-----C-----TATATGCTCTACCATATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 22577 491 + 36344 GTTAAACCTGAAAGTGGTACA-----ATTCAAAACTTGATGTAGGCAATAGGTATGTATAATGTATTTATTCTAATATGAGAGGGTATATCAAAGTAATTTTCTTGGAGCACACTGTCAAAACAAAGCAATGGGATTTGGCCATGGACATTTCATTATTATCAAAGAGACCTGG-ACACTACCTTAGAGTAATAACTTTATTATTTAGCAAAGATGTTTTATAAAAAG----AACAACAAA----ATGAGAGGAA--TAGAAATCA-CGC-AGGTAAAACAGATAA--------T--------CTGATTTTGTGGGTCTCAGAGCAGAGATTAGTGTCT-T----TCAGTTTCCGAGTAAATGACCTCACTGCATTTCTCTGAACTGTCATGGTTGTCACAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTACAAAGTAACAAAGGCAAAATAAC-----C-----TATATGCTCTACCATATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42531900 496 + 85365473 GTTAAACCTGAAAGTGGTATG-----ATTCAAAACTTGATATAGGCAATAGGTATGTAAAATGTATGTATTCTAATACGAGAGGGCATATCGAAGTAATTTCCTTGGAGCACACTGACAAAACAAAGCAATGGGATTTGGCCATGGACATTTCATTATTACCAAGCAGACCTGGGACACTACCTTATAGTAATAACTTTATTATCTAGCAAAGGTGCTTTATAAATAGG-ACAACGACAAA----ATGAGAGGAA--TAGAAATCA-TAC-AGATAAAACAGATAA--------T--------CTGATTTTGTGGGTCTCAGACCAGAGATTAGTGTTGAT----TCAGTTTCAGAGTAAACGACCTCGTTGCATTTCTCTGAACTGTCATGATTGTCATAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTTCAAAGTAACAGAGGCAAAATAAT-----C-----TATATGCTCTACCATATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAACGTTTTCTCTAAATC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145374796 495 - 190429646 GTTAAACCTGGAAGTG-TATG-----ATTCAAAACTTGATATAGGCAATAGGTATGTAAAATGTATGTATTCTAATATGAGAGGGCAAATCGAAGTAATTTTCTTGGAGCACACTGATAAAACAAAGCAATTGGATCTGGTGATGGACATTTCATTATCATCCAACAGACCTGGGACACTACCTTATAGTAATAACTTTATTGTTTAGCAAAGGTGCTTTATAAATAGA-ACAACAACAAA----ATAAGAGGAA--TAGAAATCA-TAC-AGCTAAAACAGATAA--------T--------CTGATTTTGTGGGTCTTAGACCAGAGAATAGTGTTCAT----TCAGTTTCAGAGTAAATGACCTCATTGCATTTCTGTGAACTGTCATTATTGTCATAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTTCGAAGTAACAGAGACAAAATAAC-----C-----TATACACTCTACCATATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144400762 495 - 189454096 GTTAAACCTGAAAGTG-TATG-----ATTCAAAACTTGATATAGGCAATAGGTATGTAAAATGTATGTATTCTAATATGAGAGGGCAAATCGAAGTAATTTTCTTGGAGCACACTGATAAAACAAAGCAATTGGATCTGGTGATGGACATTTCATTATCATCCAACAGACCTGGGACACTACCTTATAGTAATAACTTTATTGTTTAGCAAAGGTGCTTTATAAATAGA-ACAACAACAAA----ATAAGAGGAA--TAGAAATCA-TAC-AGCTAAAACAGATAA--------T--------CTGATTTTGTGGGTCTTAGACCAGAGAATAGTGTTGAT----TCAGTTTCAGAGTAAATGACCTCATTGCATTTCTCTGAACTGTCATTATTGTCATAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTTCGAAGTAACAGAGACAAAATAAC-----C-----TATACACTCTACCATATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC i macFas5.chr5 C 0 I 1506 s macNem1.NW_012011022v1 3515157 494 + 39453387 GTTAAACCTGAAAGTG-TATG-----ATTCAAAACTTGATATAGGCAATAGGTATGTAAAATGTATGTATTCTAATATGAGAGGGCAAATCGAAGTAATTTTCTTGGAGCACACTGATAAAACAAAGCAATTGGATCTGGTGATGGACATTTCATTGTCATCCAACAGACCTGGGACACTACCTTATAGTAATAACTTTATTGTTTAGCAAA-GTGCTTTATAAATAGA-ACAACAACAAA----ATAAGAGGAA--TAGAAATCA-TAC-AGCTAAAACAGATAA--------T--------CTGATTTTGTGGGTCTTAGACCAGAGAATAGTGTTGAT----TCAGTTTCAGAGTAAATGACCTCATTGCATTTCTCTGAACTGTCATTATTGTCATAAATATACTGTGTTTTAACACACTCCATG-ATTTAAGGTCTTCGAAGTAACAGAGACAAAATAAC-----C-----TATACACTCTACCATATTTTCCTCAATTCTAGTGTTGTTCAAAGA-----GAGAATGTTTTCTCTAAATC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1137607 495 + 25348628 GTTAAACCTGAAAGTG-TAGG-----ATTCAAAACTTGATATAAGCAATAGGTATGTAAAATGTATGTATTCTAATATGAGAGGGCAAATCGAAGTAATTTTCTTGGAGCACACTGATAAAACAAAGCAATTGGATCTGGTGATGGACATTTCATTACCATCCAACAGACCTGGAACACTACCTTATAGTAATAACTTTATTGTTTAGCAAAGGTGCTTTATAAATAGA-ACAACAACAAA----ATAAGAGGAA--TAGAAATCA-TAC-AGCTAAAACAGATAA--------T--------CTGATTTTGTGGGTCTTAGACCAGAGAATAGTGTTGAT----TCAGTTTCAGAGTAAATGACCTCATTGCATTTCTCTGAACTGTCATTATTGTCATAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTTCGAAGTAACAGAGACAAAATAAC-----C-----TATACACTCTACCATATTTTCCTCTATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5148352 499 + 48547382 GTTAAACCTGAAAGTG-TATG-----ATTCAAAACTTGATATAGGCAATAGGTATGTAAAATGTATGTATTCTAATATGAGAGGGCAAATCGAAGCAATTTTCTTGGAGCACACTGATAAAACAAAGCAATTGGATCTGGTGATGGACATTTCATTATCATCCAACAGACCTGGGACACCACCTTATAGTAATAACTTTATTGTTTAGCAAAGGTGCTTTATAAATAGA-ACAACAACAAA----ATAAGAGGAA--TAGAAATCA-TAC-AGCTAAAACAGATAA--------T--------CTGATTTTGTGGGTCTCAGACCAGAGAGTAGTGTTGATTCAGTCAGTTTCAGAGTAAATGACCTCATTGCATTTCTCTGAACTGTCATTATTGTCATAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTTCGAAGTAACAGAGACAAAATAAC-----C-----TATACACTCTACCACATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 51070 495 + 130402 GTTAAACCTGAAAGTG-TATG-----ATTCAAAACTTGATATAGGCAATAGGTATGTAAAATGTATGTATTCTAACATGAGAGGGCAAATCGAAGTAATTTTCTTGGAGCACACTGATAAAACAAAGCAATTGGATCTGGTGATGGACATTTCATTATCATCCAACAGACCTGGGACACTACCTTATAGTAATAACTTTATTGTTTAGCAAAGGTGCTTTATAAATAGA-ACAACAACAAA----ATAAGAGGAA--TAGAAATCA-TAC-AGCTAAAACAGATAA--------T--------CTGATTTTGTGCGTCTTAGACCAGAGAATAGTGTTGAT----TCACTTTCAGAGTAAATGACCTCATTGCATTTCTCTGAACTGTCATTATTGTCATAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTTCGAAGTAACAGAGACAAAATAAC-----C-----TATACACTCTACCATATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4189903 495 + 12320365 GTTAAACCTGAAAGTA-TATG-----ATTCAAAATTTGATATAGGCAATAGGTATGTAAAATGCATGTATTCTAATATGAGAGGGTAAATCGAAGTAATTTTCTTAGAGCATACTGATAAAACAAAGCAATTGGATCTGGTGATGGACATTTCATTATTATCCAACAGACCTGGGACCCTAACTTATAGTAATAACTTTATTATTTTGCAAAGGTGCTCTATAAATAGA-ACAACAACAAA----ATAAGAGGAA--TAGAAATCA-TAC-AGATAAAACAGATAA--------T--------CTGATTTTGTGGGTCTCAGACCAGAGAATAGTGTTGAT----TCAGTTTCAGAGTAAATGCCCTCATTGCATTTCTCTGAACTGTCCTTATTGTCATAAATATACTGTGTTCTAACACACTCCATG-ATTTAAGGTCTTCAAAGTAACAGAGACAAAATAAC-----C-----TAAACACTCTACCATATTTTCCTCAATTCTAGTGTTCTTCAAAGA-----GAGAATGTTTTCTCTAAATC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145651888 497 + 190850796 GTTAAACATGAAAGTGGTGCA-----ATTCAAAACTTAATACAGGCAACAGGTATATATAATGTATTTATTCTAATATGAGAGGGCATATAGAAGTAATTTTCTTAGAGCACACTGACAAAACAGAGCAATGGGATTTCACCATGGACGTTTCATTATTATCAAAGAGACCTGGGACACTACCTTATAGTAATAACTTTAATATTTAGCAAAGATGCTTTACAAATAGA-ATGACAACAAA----ATAAGAGGAA--TGGAAATCA-TAC-AGATAAAACAGATAA--------T--------CTGATTTTGTGGGTCTCAGACTAGAGATTAGTGTTGAT----TCTTTTTCAGAGTAAATGACCTCATCACATTTTTCTGAACTGTCATGGTTGTTATAAATATACTGTGTTCTAACACACTTCATGAATTTAAGGTCTTCAAAGTAACAGAGGCAAAATAAC-----C-----TATAGGCTCTACCATACTTTCCCCAATTCCAGTGTTCTCAAAAGA-----GAGAATGTTTTCTCTAAATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14562751 495 + 15139346 GTTAAACATGAAAGTGGTGCA-----ATTCAAAAC--GATACAGGCAATAGATATGTATAATGTATTTACTCTAACATGAGAGGGCATATCAAAGTAGTTTTCTTGGAGCACACTGACAAAACAGAGCAATGGGATTTCGCCATGGACGTTTCATTATTATCAAAGAGACCTGGGACACTACCTTATAGTAATAACTTTAATATTTAGCAAAAGTGCTTTACAAATAGA-ACGACAACAAA----ATGAGAGGAA--TGGAAATCA-TAC-AGATAAAACAGATAA--------T--------ATGATTTTGTGGGTCTCAGACTAAAGATTAGTGTTGAT----TCTTTTTCGGAGTAAATGATATCATCACATTTTTCTGAACTATCACGATTGTTATAAATATACTGTGTTCTAACACACTTCATTAATTTAAGGTCTTCAAAGTAACAGAGGCAAAATAAC-----C-----TATAGACTCCACCATATTCTCCCCAATTCTAGTGTTCTCAAAAGA-----GAGAATGTTTTCTCTAAATC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 388679 497 + 3802414 GTTAAACATGAAAGTGGTGCA-----ATTCAAAACTTGATATGGGCAATAGGTATGTATAATGTATTTATTCAAATATGAGAGGGCATATCGAAGTAATTTTCTTGGAGCACACTGACAAAACAGAGCAATGGGATTTCGCCATGGACGTTTCATTATTATCAAAGAGACCTGGGACACTACCTTATAGTAATAACTTTAATATTTAGCAAAGGTGCTTTACAAATAGA-ATGACAACAAA----ATGAGAGGAA--TGGAAATCA-TAC-AGATAAAACAGATAA--------T--------CTGATTTTGTGGGTCTCAGACTAGAGATTAGTGTTGAT----TCTTTTTCAGAGTAAATGACCTCATCGCATTTTTCTGAACTGTCATGGTTGTTATAAATATACTGTGTTCTAACACACTTCATGAATTTAAGGTCTTCAAAGTAACAGAGGCAAAATAAC-----C-----TATAGGCACTACCATATTTTCCCCAATTCTAGTGTTCTTGAAGGA-----GAGAATGTTTTCTCTAAATC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9748081 497 + 11631747 GTTAAACATGAAAGTGGTGTA-----ATTCAAAACTGGATATAGGCAATAGGTATGTATAATGTATTTATTCTAATATGAGAGGGCATATAGAAGTAATTTTCTTGGAGCACACTGACAAAACAGAGCAATGGGATTTCGCCATGGACGTTTCATTAATACCAAAGAGACCTGGGACACTACCTTATAGTAATAACTTTAATATTTAGCAAAGGTGCTTTACAAATAGA-ATGACAGCAAG----ATGAGGGGAA--TGGAAATCA-TAC-AGATAAAAAAGATAA--------T--------CTGATTTTGTGGGTCTCAGACTAGAGATTAGTGTTGAT----TCTTTTTCAGAGTAAATGACTTCATCGCATTTTTCTGAACTGTCATGGTTGTCATAAATATACTGTGTTCTAACACACTTCATGAATTTAAGGTCTTCAAAGTAACAGAGGCAAAATAAC-----C-----TATAGGTTCTACCATACTTTCCCCAATTCTAGTGTTCTCGAAAGA-----GGGGATGTTTTCTCTGAATC i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21697172 445 - 63241923 GTTAAAACTGAAAATGGTACA-----ATTCAAAATGTGATATAGGTAATAGGTATGTGTAATTTATTCTTTTTCACATGGAAGGGCATTTAAAAGTAATTTCCTGGGAGTATATC---------------------------------------TCTTTATCAAAGAGACCTGG-TCTCTATGTTATAGTGATATCTTTGTTATTTAGTAGAGGTGCTCTATAAATAGGTCCAAAAACAAA----ATGAAAAAAAACCACCAATCAGTAA-AAATTAAACAGGTAA--------C--------CTGATCTTATGGGCCTTAT-----AGATTAGTGT---T----TCA----CAG---CAAGGACTTAATCACATTTCTCTGAATTACC----TTCTCGTGAGCATCCTATGTATTGGCATATACCATG-GTCTCAAGTCCTCAGA--ACCAGAGGCATAATAAACCAAGC-----CAGAAGCTCTACCATATTTTCCTCCACTCTGGTGCTCTTCAAATAC----AAGAATGTTTTCTCTAAGCC i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 108008 512 + 255898 GTTAAAATT--AAGTGTTATAAATATATTCAAAATGTCATAGAAGCTATGGATATATGTAAACTATTCTTTCTAATATAACATGGCATTTCAAAGTAATTTCCTTGGAATGTACT-----CAGAAAGCAATGGGCTTTGGT--TGCACAGTTTGTTACTATCAAAGAGATCTAAGTCTCTACC-TACAGTGATACCTTTGTTAATTAGCAGGAAATCTCCATAAATAGA-ACAAAAAAAAAAAACACGAAAGGAA--TAGAAGTCA-CCTGAAATAAAGAAGATAA--------TTTAAGAAGCTGATGTTGTGGACCTTGAAACAGAGATTGTTATTT-C----ACACTTTCAGAGCAAA-GACCTTGTCATATTTCTCTGAACTATCACAGCTTTCAGAAATATGCTGTGTTCTGACATTCATCATG-ATCTGAGTTATTCAGAGGAGCAGAGGCTAAATAAA-----CCAAGTTACAAGCTCTGCCATATTAACCTCAGTTCTAGAGTTTCTCAAATACCTATAAGAATGTTTTCTTTCAGCC i dasNov3.JH575793 I 2275 C 0 e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I a score=15561.000000 s hg38.chr9_KI270719v1_random 129826 1 + 176845 T s panTro5.chr4 86962166 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 87738512 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 23068 1 + 36344 T i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42532396 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145375291 1 - 190429646 T i rheMac8.chr5 C 0 I 2027 s macFas5.chr5 144402763 1 - 189454096 t i macFas5.chr5 I 1506 C 0 s macNem1.NW_012011022v1 3515651 1 + 39453387 T i macNem1.NW_012011022v1 C 0 I 445 s cerAty1.NW_012002843v1 1138102 1 + 25348628 T i cerAty1.NW_012002843v1 C 0 I 446 s papAnu3.chr5 138758770 1 - 178775436 t i papAnu3.chr5 N 0 I 9100 s chlSab2.chr27 5148851 1 + 48547382 T i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 51565 1 + 130402 T i manLeu1.NW_012102858v1 C 0 I 446 s colAng1.NW_012120821v1 4190398 1 + 12320365 T i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145652385 1 + 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14563246 1 + 15139346 T i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 389176 1 + 3802414 T i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9748578 1 + 11631747 T i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21697617 1 - 63241923 T i canFam3.chr13 C 0 I 1 s dasNov3.JH575793 108520 1 + 255898 T i dasNov3.JH575793 C 0 C 0 e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I a score=-856.000000 s hg38.chr9_KI270719v1_random 129827 1 + 176845 -A s panTro5.chr4 86962167 1 + 194502333 -A i panTro5.chr4 C 0 C 0 s panPan2.chr4 87738513 1 + 195804263 -A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 23069 1 + 36344 -A i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42532397 1 + 85365473 -A i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144402764 1 - 189454096 -g i macFas5.chr5 C 0 C 0 s chlSab2.chr27 5148852 1 + 48547382 -A i chlSab2.chr27 C 0 C 0 s colAng1.NW_012120821v1 4190399 1 + 12320365 -A i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145652386 1 + 190850796 -A i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14563247 1 + 15139346 -A i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 389177 1 + 3802414 -A i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9748579 1 + 11631747 -A i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 108521 1 + 255898 C- i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21697618 1 - 63241923 I e manLeu1.NW_012102858v1 51566 446 + 130402 I e cerAty1.NW_012002843v1 1138103 446 + 25348628 I e macNem1.NW_012011022v1 3515652 445 + 39453387 I e rheMac8.chr5 145375292 2027 - 190429646 I a score=4433449.000000 s hg38.chr9_KI270719v1_random 129828 397 + 176845 ATTGAGAGTAATTCTGTATGGATCGGTAAACATTTCTTCAGGCAGTT-GGAGTAATATGTGTCTAGGGCTAACTCAGAGGGG-TCTTTTATGTCTTTTAATAGAAGCTAACTATACTCTTGTGATATGATAATCACCATCATTGACTTACAGTTTCTAAGGTTTGAAGGTATATTGAACACTCAAGGGG--CTCACATTCTTACTGATTCATGAATCTCTTCAGGTCCAGGGAACTTAGTATTTTTC--AAGAG--TGCAAA-ATGCCTAGAGACAG--------------------------------CTGGGAACAAATGAATGTCATTCCTGATACTGTGCTCATAGTTACTTGAGTTTCATCTCAGAAAATAAATTGTCTGGTGCAATATTTCTTACAACTTAGTTCCTAAA-TG-AACTCAACAAACTAGTTCTT s panTro5.chr4 86962168 397 + 194502333 ATTTAGAGTAATTCTGTATGGATCGCTAAACATTTCTCCAGGCAATT-GGAGTAATGTGTGTCTAGGGCTAACTCAGAGGGA-TCTTTTGTGTCTCTTAAAAGAAGCTAACTACACTCTTGTGAGATGATAATCACCATCATTGACTGACAATTTCTAAGGTTTGAAGGGATATTGAATACTCAA-GGG--CTCACATTCTTTTTGATTCATGAATCTCTTCAGGTACAGGGAACTTAGTATTTTTC--AAGAG--TGCAAAGATGCCTAGAGACAT--------------------------------CTGGGAACATAAGAACATCATTCCTGATGTTGCGCTCGTAGTTACTTGAGCTTCATCTCAGAAAATAAATTGCCTGGTGCAATATGTCTTACAATTTGGTTCCTAAA-TC-AACtcaacaaactagttctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 87738514 397 + 195804263 ATTTAGAGTAATTCTGTATGGATCGCTAAACATTTCTCCAGGCAATT-GGAGTAATGTGTGTCTAGGGCTAACTCAGAGGGA-TCTTTTGTGTCTCTTAAAAGAAGCTAACTACACTCTTGTGAGATGATAATCACCATCATTGACTGACAATTTCTAAGGTTTGAAGGGATATTGAATACTCAA-GGG--CTCACATTCTTTTTGATTCATGAATCTCTTCAGGTACAGGGAACTTAGTATTTTTC--AAGAG--TGCAAAGATGCCTAGAGACAT--------------------------------CTGGGAACATAAGAACATTATTCCTGATGTTGCGCTCGTAGTTACTTGAGCTTCATCTCAGAAAATAAATTGCCTGGTGCAATATGTCTTACAATTTGGTTCCTAAA-TC-AACtcaacaaactagttctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 23070 397 + 36344 ATTGAGAGTAATTCTGTATGGATCGATAAACATTTCTTCAGGCAGCT-GGAGTAATATGTGTCTAGGGCTAACTCAGAGGGG-TCTTTTATGTCTTTTAAAAGAAGCTAACTATACTCTTGTGATATGATAATCACCATCATTGACTTACAGTTTCTAAGGTTTGAAGGTATATTGAACACTCAAGGGG--CTCACATTCTTACTGATTCATGAATCTCTTCAGGTCCAGGGAACTTAGTATTTTTC--AAGAG--TGCAAA-ATGCCTAGAGACAG--------------------------------CTGGGAACAAATGAATGTCATTCCTGATACTGTGCTCATAGTTACTTGAGCTTCATCTCAGAAAATAAATTGTCTGGTGCAATATTTCTTACAACTTAGTTCCTAAA-TG-AACTCAACAAACTAGTTCTT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42532398 396 + 85365473 ATTTAGAGTAATTCTGTATGGATCGCTAAACATTTCTCCAGGCAATT-GGAGTAATGTGTGTCTAGGGCTAACTCAGAGGGA-TCTTTTGTGTCTCTTAAAAGAAGCTAACTATACTCTTGTGAGATGATAATCACCATCATTGACTGACAATTTCTAAGGTTTGAAGGGATACTGAATACTCAA-GGG--CTCACATTCTTTTTGA-TCATGAATCTCTTCAGGTACAGGGAACTTAGTATTTTTC--AAGAG--TGCAAAGATGCCTAGAGACAT--------------------------------CTGGGAACATAAGAACATCATTCCTGATATAGAGCTCATGGTTACTTGAGCTTCATCTCAGAAAATAAATTGCCTGGTGCAATATGTCTTACAATTTGGTTCCTAAA-TC-AACTCAATAAACTAGTTCTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145377319 398 - 190429646 attgaaagtAATTCTGTATGCATCGCTAAACATTTCTCCAGGCAATT-GGAGTAATGTGTGTCTAGGGCTAACTCAGAGGAA-TCTTTTGTGTCTCATAAAAGAAGCTAACTATACTCTTGTGAGATGATAATCACTATCATTGACTGACAATCCCTAAGGTTTGAAGGGATATTGAATACTCAA-GGGTATTCACATTCTTTTTGATTCATGAATCTCTTCAGGTACAGGGAACTTAGTGTTTTTC--AAGAG--TGCAAA-ATGCCTAGAGACAG--------------------------------CTGGGAACATAAGAATGTCATTCATGATATTGCGCTCATAGTTACTTGAGCTTCATCTCGGAAAATAAATTGCCTTGTGCAATATTTCTTACAACTTGGTTCCTAAA-TC-AACtcaacaaactagttctt i rheMac8.chr5 I 2027 C 0 s macFas5.chr5 144402765 398 - 189454096 attgaaagtAATTCTGTATGCATCGCTAAACATTTCTCCAGGCAATT-GGAGTAATGTGTGTCTAGGGCTAACTCAGAGGAA-TCTTTTGTGTCTCATAAAAGAAGCTAACTATACTCTTGTGAGATGATAATCACTATCATTGACTGACAATCTCTAAGGTTTGAAGGGATATTGAATACTCAA-GGGTATTCACATTCTTTTTGATTCATGAATCTCTTCAGGTACAGGGAACTTAGTGTTTTTC--AAGAG--TGCAAA-ATGCCTAGAGACAG--------------------------------CTGGGAACATAAGAATGTCATTCATGATATTGCGCTCATAGTTACTTGAGCTTCATCTCGGAAAATAAATTGCCTTGTGCAATATTTCTTACAACTTGGTTCCTAAA-TC-AACtcaacaaactagttctt i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3516097 398 + 39453387 attgaaagtAATTCTGTATGCATCGCTAAACATTTCTCCAGGCAATT-GGAGTAATGTGTGTCTAGGGCTAACTCAGAGGAA-TCTTTTGTGTCTCATAAAAGAAGCTAACTATACTCTTGTGAGATGATAATCACTATCATTGACTGACAATCTCTAAGGTTTGAAGGGATATTGAATACTCAA-GGGTATTCACATTCTTTTTGATTCATGAATCTCTTCAGGTACAGGGAACTTAGTGTTTTTC--AAGAG--TGCAAA-ATGCCTAGAGACAG--------------------------------CTGGGAACATAAGAATGTCATTCATGATATTGCGCTCATAGTTACTTGAGCTTCATCTCGGAAAATAAATTGCGTTGTGCAATATTTCTTACAACTTGGTTCCTAAA-TC-AACtcaacaaactagttctt i macNem1.NW_012011022v1 I 445 C 0 s cerAty1.NW_012002843v1 1138549 398 + 25348628 attgaaagtAATTCTGTATGGATCGCTAAACATTTCTCCAGGCAATT-GGAGTAAAGTGTGTCTAGGGCTAACTCAGAGGGA-TCTTTTGTGTCTCTTAAAAGAAGCTAACTATACTCTTGTGAGATGATAATCACCATCATTGACTGACAATCTCTAAGGTTTGTAGGGATATTGAATACTCAA-GGGTATTCACATTCTTTTTGATTCATGAATCTCTTCAGGTACAGGGAACTTAGTGTTTTTC--AAGAG--TGCAAA-ATGCCTAGAGACAG--------------------------------CTGGGAACATAAGAATGTCATTCATGATATTGCGCTCATAGTTACTTGAGCTTCATCTTGGAAAATAAATTGCCTTGTGCAATATTTCTTACAACTTGGTTCCTAAA-TC-AACtcaacaaactagttctt i cerAty1.NW_012002843v1 I 446 C 0 s chlSab2.chr27 5148853 397 + 48547382 ATTGAGAATAA-TATGTATGGATCGCTAAACATTTCTCCAGGCAATT-GGAGTAATGTGTGTCTAGGGCTAACTCAGAGGGA-TCTTTTGTGTCTCTTAAAAGAAGCTACCTATACTCTTATGAGATGATAATCACCATCATTGACTGACAATCTCTAAAGTTTGAAGGGATATTGAATACTCAA-GGGTATTCACATTCTTTTTGATTCATGAATCTCTTCAGGTACAGGGAACTTAGTGTTTTTC--AAGAG--TGCAAA-ACGCCTAGAGACAG--------------------------------CTGGGAACATAAGAACGTCATTCATGATATTGCGCTCATAGTTACTTCAGCTTCATCTCGGAAAATAAATTGCCTTGTGCAATATTTCTTACAACTTGGTTCCTAAA-TC-AACtcaacaaactagttctt i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 52012 398 + 130402 attgaaagtAATTCTGTATGGATCGCTAAACATTTCTCCAGGCAATT-GGAGTAAAGTGTGTCTAGGGCTAACTCAGAGGGA-TCTTTTGTGTCTCTTAAAAGAAGCTAACTATACTCTTGTGAGATGATAATCACCATCATTGACTGACAATCTCTAAGGTTTTTAGGGATATTGAATACTCAA-GGGTATTCACATTCTTTTTGATTCATGAATCTCTTCAGGTACAGGGAACTTAGTGTTTTTC--AAGGG--TGCAAA-ATGCCTAGAGACAG--------------------------------CTGGGAACATAAGAATGTCATTCATGATATTGCGCTCATAGTTACTTGAGCTTCATCTCGGAAAATAAATTGCCTTGTGCAATATTTCTTACAACTTGGTTCCTAAA-TC-AACtcaacaaactagttctt i manLeu1.NW_012102858v1 I 446 C 0 s colAng1.NW_012120821v1 4190400 398 + 12320365 ATTGAGAGTAATTCTGTATGGATCGTTAAACATTTCTCCAGGCAATT-GGTGTAATGTGTGTCTAGGGCTAACTCAGAGGGA-TCTTTTGTGTCGCTTAAAAGAAGCTAACTATACTCTTGTGAGATGATAACCACCATCATTGACTGACAATCTCTAAGGTTTGAAGGGATATTGAATACTCAA-GGGTGTTCACATTCTTTTTGATTCATGAATCTCTTCAGGTACTGGGAACTTAGTGTTTTTC--AAGAG--TGCAAA-ATGCCTAGAGACAG--------------------------------TTGGGAACATAAGAACGTCATTCCTGATATTGTGCTCATAGGTACTTGAGCTTCATCCCGGAAAATAAATTGCCTTGTGCAATATTTCTTACAACTTGGTTCCTAAA-TC-AGCtcaacaaactagttctt i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145652387 396 + 190850796 ATTGAGAGTAATTCTGTATGGATCGCTAAACATTTCTCCACGCAATT-GGAGTAATGAGTGTCTAGAGCTAATTCAGAGAGA-TCTTTTATGTCTCTTTAAAGAAGCTAATGGTGCTCTTGTGAGATGATAATCACCATCACTGAGTGATAATTTCTAAAGTTTGAAGGTATATTGAACACTCAG-GGG-GCCCACATCCTTTCTGATTCATGAATCTCTTCAGGTACGGGGAACTTAGTGTTTTCC--AAGAG--TGCAAA-ATGCTGAGAGACAG--------------------------------CTGGGAACAT-AGAGTATCATTCCAGATATTGTCCTCATAGTTACTTGAGCTTCATCTCAGAAAACGGATTGCCTGGTTTAATATTTCTTATAACTTCGTTCCCAAA-TC-AACTCAACAAACTAGTTCCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14563248 397 + 15139346 ATTGAGAGTAATTCTGTATGGATCGCTAAACATTTCTCCACGCAATT-GGAGTAATGAGTGTCTAGGGCTAATTCAGAGGGA-TCTTTTATGTCTCTTAAAAGAAGCTAATGGTACTCTTGTGAGATGATAATCACCATCACTGACTGACAATTTCTAAAGTTTGAAGGCATATTGAACACTCAA-GGG-GCCCACATCCTTTCTGATTCATGAATCTCTTCAGGTACGGGGAGCTTAGTGTTTTCC--AAGAG--TGCAAA-ATGCAAAGAGACAG--------------------------------CTTGGTACATAAGAGTACCATTCCTGGTATTGTACTCATAGTTACTTGAGCTTCATTTCAGAAAATGGATGGCCTGGTTCAATATTTCTTACAACTTCGTTCCTAAA-TC-AACTCAACAGACGAGTTCTT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 389178 398 + 3802414 ATTGAGAGTAATTCTGTATGGATCGCTAAACATTTCTCCACGCAATTGGGAGTAATGAGTGTCTAGGGCTAATTCAGAGGGA-TCTTTTATGTCTCTTAAAAGAAGCTAATGGTACTCTTGTGAGATGATAATCACCATCACTGACTGACAATTTCTAAAGTTTGAAGGTATATTGAACACTCAA-GGG-GCCCACATCCTTTCTGATTCATGAATCACTTCAGGTATGGGGAACTTAGTGTTTTCC--AAGAA--TGCAAA-ATGCCGAGAGGCAG--------------------------------CTGGGCACATAAGAGTATCATTCCTGATATTGTACTCATAGTTACTTGAGCTTCATCTCAGAAAATAGATTGCCTGGTTCAATATTTCTTACAACTTCTTTCCTAAA-TC-AACTCAACAAACTAGTTCTT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9748580 397 + 11631747 ATTGAGAGTAATACTGTATGGATCGCTAAACATTTCTCCACGTAATT-GGAGTAATGAGTGTCTAGGGCTAATTCAGAGAGA-TCTTTTATGTCTCTTAAAAGAAGCTAATGGTACTCTCGTGAGATGATAATCACCATCACTGACTGACAATTTCTAAAGTTTGAAGGTATATTGAACACTCAA-GGG-GACCACATCCTTTCTGATTCATGAATCTCTTCAGGTACGGAGAACTTAGTGTTTTCC--AAGAG--TGAAAA-ATGCCGAGAGACAG--------------------------------CTGGGTACATAAGAGTATCATTCCTGATATTGTACTCATAGTTACTTGAGCTTCATCTCAGAAAATGGATTGCCTGGTTCAATATTTCTTACAGCTTCGTTCCTAAA-TC-AACTCAACAAACTAGTTCTT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21697619 431 - 63241923 ACTGAGAGTAATTTTGTGTGGATTGTTCAACATTTCTCCAGGCAATT-GGGGTAAAGTGTGTCTAGGGATGAGTCAG-GGAC-TCTACTATGTCTCTTAAAAAAAGCTAATTATACTCTTATGGGATGATAATTACCATCACAGACTGACAATCTCCAAGGTTTGAATGTATTTTGAACATTTAA-ATA-GTCCACGTCCTTTCTGATTCACGAATCTTTTTATGTACAGGGAAATTAGTACTTCTC--AGGAGACTACTAC-ATGCCTACAAACAGTTCTTTGTAGTTGTTGTGGTTGGCATGCCTTACTACAAAAGTAAGAACATCATTTCTTATATTGTACTCATATTTATTTCTCTTTAGTCTTGGAGCATAAACTACCTGGAGTAGTATTTCTTACAACATGGCCCCTCAA-TCAAACTCAACACACTAGCTCCT i canFam3.chr13 I 1 I 556 s dasNov3.JH575793 108522 401 + 255898 ATTGACAGTAATTCTGTGTGGTTTGCTAAACATTTCTCTAGGCAATT-GGGGTAATGTGTGTCTAGAGACAGCTCAGAGGGACTTTTCTATATCTCTTTCAAAAAGCTAATTATACCCTCATGGAATAATAATTATCATCACAGATTGACAATTATCAAGGTTTGAAGGGATTTTGAACTGTCAA-AGGAGTCCAcatcccatctgattcatgaatctcttaagagacaggaaatttagtatttcgcaaaagag--aacaac-atttctacagacag--------------------------------ctgtgaatgtaacaacgtcattccttat-ttgagctcatagctatttttctttagcctcAAAGCATAAATACCCTGGTGTAATATTTCTTATAACCTGTTCTCCAAACTA-AAGTCACTGAACTGGTTCTT i dasNov3.JH575793 C 0 I 33 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I a score=10920.000000 s hg38.chr9_KI270719v1_random 130225 1 + 176845 T s panTro5.chr4 86962565 1 + 194502333 t i panTro5.chr4 C 0 I 32 s panPan2.chr4 87738911 1 + 195804263 t i panPan2.chr4 C 0 I 32 s gorGor5.CYUI01002260v1 23467 1 + 36344 T i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42532794 1 + 85365473 T i nomLeu3.chr20 C 0 I 4 s rheMac8.chr5 145377717 1 - 190429646 t i rheMac8.chr5 C 0 I 32 s macFas5.chr5 144403163 1 - 189454096 t i macFas5.chr5 C 0 I 4 s macNem1.NW_012011022v1 3516495 1 + 39453387 t i macNem1.NW_012011022v1 C 0 I 32 s cerAty1.NW_012002843v1 1138947 1 + 25348628 t i cerAty1.NW_012002843v1 C 0 I 32 s chlSab2.chr27 5149250 1 + 48547382 t i chlSab2.chr27 C 0 I 32 s manLeu1.NW_012102858v1 52410 1 + 130402 t i manLeu1.NW_012102858v1 C 0 I 32 s colAng1.NW_012120821v1 4190798 1 + 12320365 t i colAng1.NW_012120821v1 C 0 I 4 s calJac3.chr3 145652783 1 + 190850796 T i calJac3.chr3 C 0 I 4 s saiBol1.JH378162 14563645 1 + 15139346 T i saiBol1.JH378162 C 0 I 4 s cebCap1.NW_016107603v1 389576 1 + 3802414 T i cebCap1.NW_016107603v1 C 0 I 36 s aotNan1.NW_018493494v1 9748977 1 + 11631747 T i aotNan1.NW_018493494v1 C 0 I 32 e papAnu3.chr5 138758771 9100 - 178775436 I e dasNov3.JH575793 108923 33 + 255898 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I a score=210328.000000 s hg38.chr9_KI270719v1_random 130226 2317 + 176845 TGTTTTATTttattttattactattatactttaagttttagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttaacattaggtatatctcctaatgctatccctccccactccccccaccccacaaccgtccctggtgtgtgatgttccccttcctgtgtccatgtgttattgttcaattcccacctatgagtgagaacatgcagtgtttggttttttgtccttgtgatagtttgctaagaatgatggtttccagcttcatccatgtccttacaaaggacatgaactcatcattttttatgactgcatagtattccatggtgtatatgtgccatattttcttaatccactctatcattgttggacatttggattggttccaagtctttgctattgtgaatagtgccacaataaacatacatgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacgcagtaatgggatagctgggtcaaaaggtatttctagctctagatccctgaggaattgccacactgacttccacaatggttgaactagtttacagtcccaccaacactgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttca--tgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatatccttcgcccactttttgatggggttgtttgtttttttcttgtaaatttgtttgagttcattgtagattctggatattagccctttgtcagatgagtaggttgcaaaaattttctcccattttgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttgtcttttgttgccattgcttttggtgttttagacatgaagtccttgcccacgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggctttaggtctaacatataagtctggaatccattttgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccatttcttctttttgtcaggtttgtcaaagatgagatagttgtagatatgcggcattatttctgagggctctgttctgttcctttggtctatatctctgttttggtaccagtaccatgctgttttggttactgtagccttgtagtatggtttgaagtcaggtagtgtgatgcctccagctttgttcttttggcttaggattgacttggaaatgtgggctcttttttggttccatatgaactttaaagtagtttttttccaattctgtgaagaaagtcattgatagcttgatggggatggaattgaatctatcaattaccttgggcagtatggccgttttcatgatattgattcttcctacccatgagcatggaatgttcttccatttgtttgtatcctcttttatttcattgagcaatggtttgtagttctccttgaagaggtccttcacatcccttgtaagttggattcctaggtattttattctctttaaagcaattgtgaatgggagttccctcatgatttggctctc---tgtctgttattgatgtataagaatggttgtgatttttgcacattgattttttatcctgagactttgctgaagttgcttatcagcttaaggagattttaggctgagataatgggtttttctagatatacaatcatgtcatctgcaaacagggacaatttggcttcctcttttcctaattgaatgccctttatttcgttctcctgcctgattgccctggccaggacttccaacactacgttgaatatgagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgtccattcagtatgatattggctgtgggtttgtcatagatggctcttattattttgagatatgtcccatcgacacctaatttattgagagtttttagcatgaagcgttgttgaattttgtcaaaggccttttcttcatctattgagataatcatgtggtttttgtctttggatctgtttatgtgctgaattatgtttattgatttT s gorGor5.CYUI01002260v1 23468 2318 + 36344 TGTTTTATTTTAttttattactattatactttaagttttagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcatcatttaacattaggtatatctcctaatgctat-cctccccactacccccaccccacaaccgtccctggtgtgtgatgttccccttcctgtgtccctgtgttattgttcaattcccacctatgagtgagaacatgcagtgtttggttttttgtccttgtgatagtttgctaagaatgatggtttccagcttcatccatgtccttacaaaggacatgaactcatcattttttatggctgcatagtattccgtggtgtatatgtgccatattttcttaatccactctatcattgttggacacttggattggttccaagtctttgctattgtgaatagtgccacaataaacatacatgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacacagtaatgggatggctgggtcaaaaggtatttctagttctagatccctgaggaattgccacactgacttccacaatggttgaactagtttacagtcccacc-acagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatatccttcacccactttttgatggggttgtttgtttttttcttgtcaatttgtttgagttcattgtagattctggatattagccctttgtcagatgagtaggttgtgaaaattttctcccattctataggttgcctgttcattctgatggtagtttcttttgctgttcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcttatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtctaacatgtaagtcttgaatccattttgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccatttcttctttttgtcaggtttgtcaaagatgagatagttgtagatatgcggcattatttctgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccatgctgttttggttactgtagccttgtagtatggtttgaagtcaggtagtgtgatgcctccagctttgttcttttggcttaggattgacttggaaatgtgggctcttttttggttccatatgaactttaaagtagtttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctataaattaccttgggcagtatggccgttttcatgatattgattcttcctacccatgagcatggaatgtt-ttccatttgtttgtatcctcttttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacatcccttgtaagttggattcctaggtattttattctctttaaagcaattgtgaatgggagttccctcatgatttggctctctgttgtctgttattgatgtataagaatggttgtgatttttgcacattgattttttatcctgagactttgctgaagttgcttatcagcttaaggagattttaggctgagacaatgggtttttctagatatacaatcatgtcatctgcaaacagggacaatttggcttcctcttttcctaattgaatg-cctttatttccttctcctgcctgattgccctggccaggacttccaacactatgttgaatatgagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgtccattcagtatgatattggctgtgggtttgtcatagatagctcttattattttgagatatgtcccatcgacacctaatttattgagagtttttagcatgaagcgttgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttggatctgtttatgtgctggattatgtttattgatttT i gorGor5.CYUI01002260v1 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87738912 32 + 195804263 I e dasNov3.JH575793 108923 33 + 255898 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I e aotNan1.NW_018493494v1 9748978 32 + 11631747 I e cebCap1.NW_016107603v1 389577 36 + 3802414 I e saiBol1.JH378162 14563646 4 + 15139346 I e calJac3.chr3 145652784 4 + 190850796 I e colAng1.NW_012120821v1 4190799 4 + 12320365 I e manLeu1.NW_012102858v1 52411 32 + 130402 I e chlSab2.chr27 5149251 32 + 48547382 I e cerAty1.NW_012002843v1 1138948 32 + 25348628 I e macNem1.NW_012011022v1 3516496 32 + 39453387 I e macFas5.chr5 144403164 4 - 189454096 I e rheMac8.chr5 145377718 32 - 190429646 I e nomLeu3.chr20 42532795 4 + 85365473 I e panTro5.chr4 86962566 32 + 194502333 I a score=34001.000000 s hg38.chr9_KI270719v1_random 132543 32 + 176845 ATGCAAGAATAATCTAAA-TTTCTCTGGTGAAA s gorGor5.CYUI01002260v1 25786 32 + 36344 ATGCAAGAATAATCTAAA-TTTCTCTGGTGAAA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42532799 31 + 85365473 ATGCAAAAATAATCTAAA-TTTCTTCTGTGAA- i nomLeu3.chr20 I 4 C 0 s macFas5.chr5 144403168 28 - 189454096 atgcaaaaataatctAAA-TTTATTTAAT---- i macFas5.chr5 I 4 C 0 s colAng1.NW_012120821v1 4190803 28 + 12320365 atgcaaaaataatctAAA-TTTCTTTAAT---- i colAng1.NW_012120821v1 I 4 C 0 s calJac3.chr3 145652788 29 + 190850796 ATGCAACAATAATCTAAATTTTTTTTGGT---- i calJac3.chr3 I 4 C 0 s saiBol1.JH378162 14563650 28 + 15139346 ATGCAACAATAATCTCAA-TTTTTTTGGT---- i saiBol1.JH378162 I 4 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87738912 32 + 195804263 I e dasNov3.JH575793 108923 33 + 255898 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I e aotNan1.NW_018493494v1 9748978 32 + 11631747 I e cebCap1.NW_016107603v1 389577 36 + 3802414 I e manLeu1.NW_012102858v1 52411 32 + 130402 I e chlSab2.chr27 5149251 32 + 48547382 I e cerAty1.NW_012002843v1 1138948 32 + 25348628 I e macNem1.NW_012011022v1 3516496 32 + 39453387 I e rheMac8.chr5 145377718 32 - 190429646 I e panTro5.chr4 86962566 32 + 194502333 I a score=7397.000000 s hg38.chr9_KI270719v1_random 132575 1 + 176845 G s panTro5.chr4 86962598 1 + 194502333 G i panTro5.chr4 I 32 C 0 s panPan2.chr4 87738944 1 + 195804263 G i panPan2.chr4 I 32 C 0 s gorGor5.CYUI01002260v1 25818 1 + 36344 G i gorGor5.CYUI01002260v1 C 0 C 0 s rheMac8.chr5 145377750 1 - 190429646 G i rheMac8.chr5 I 32 C 0 s macFas5.chr5 144403196 1 - 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3516528 1 + 39453387 G i macNem1.NW_012011022v1 I 32 C 0 s cerAty1.NW_012002843v1 1138980 1 + 25348628 G i cerAty1.NW_012002843v1 I 32 C 0 s chlSab2.chr27 5149283 1 + 48547382 G i chlSab2.chr27 I 32 C 0 s manLeu1.NW_012102858v1 52443 1 + 130402 G i manLeu1.NW_012102858v1 I 32 C 0 s colAng1.NW_012120821v1 4190831 1 + 12320365 A i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145652817 1 + 190850796 G i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14563678 1 + 15139346 G i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9749010 1 + 11631747 G i aotNan1.NW_018493494v1 I 32 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e dasNov3.JH575793 108923 33 + 255898 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I e cebCap1.NW_016107603v1 389577 36 + 3802414 I e nomLeu3.chr20 42532830 0 + 85365473 C a score=19110.000000 s hg38.chr9_KI270719v1_random 132576 2 + 176845 AA s panTro5.chr4 86962599 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87738945 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 25819 2 + 36344 AA i gorGor5.CYUI01002260v1 C 0 C 0 s rheMac8.chr5 145377751 2 - 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144403197 2 - 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3516529 2 + 39453387 AA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1138981 2 + 25348628 AA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5149284 2 + 48547382 AA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 52444 2 + 130402 AA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4190832 2 + 12320365 AA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145652818 2 + 190850796 AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14563679 2 + 15139346 AA i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9749011 2 + 11631747 AA i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 108956 2 + 255898 AA i dasNov3.JH575793 I 33 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I e cebCap1.NW_016107603v1 389577 36 + 3802414 I e nomLeu3.chr20 42532830 0 + 85365473 C a score=1924165.000000 s hg38.chr9_KI270719v1_random 132578 196 + 176845 CCTAAACATGCCTTTTAAAAATTTATATATCATTCCTTTTGT-AAAA-CCT-AATGAAAATAACAATTTTGTCTATTGTAAAAGGCAAGTGATCGCAGCAGAT--GGAAATCACTTTATTTCCTAT-ATCTTTGTAAAG---ATAATGACTGCTAATAAACAACATGAAGAATTTTCAGGTATAATTTTGATAAAAATTT-AACGG- s panTro5.chr4 86962601 203 + 194502333 CCTAAACATGCCTTT-AAAAATTTATATATCATTCCTTTCAT-AAAAACCT-AATGAAAATAACAATTTTGTCTACTGTAAATGGCAGGTGATTGCAACAGATTTGGAAATCACTTTATATCCTATTATCTTTGTAAACCCCATAATGACTACTAATAAACAACATAAAGAATTTTTAGGTATAATTTTGAAAAAAATTTTAATGA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87738947 203 + 195804263 CCTAAACATGCCTTT-AAAAATTTATATATCATTCCTTTCAT-AAAAACCT-AATGAAAATAACAATTTTGTCTATTGTAAATGGCAGGTGATTGCAACAGATTTGGAAATCACTTTATATCCTATTATCTTTGTAAACCCCATAATGACTACTAATAAACAACATAAAGAATTTTTAGGTATAATTTTGAAAAAAATTTTAATGA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 25821 195 + 36344 CCTAAACATGCCTTTTAAAAATTTATATATCATT-GTTTTGT-AAAA-CCT-AATGAAAATAACAATTTTGTCTATTGTAAAAGGCAAGTGATTGCAACAGAT--GGAAATCACTTTATTTCCTAT-ATCTTTGTAAAG---ATAATGACTGCTAATAAACAACATGAAGAATTTTCAGGTATAATTTTGATAAAAATTT-AATGG- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42532830 203 + 85365473 CCTAAACATGCCTTT-AAAAATTTATATATCATTCCTTTCAT-AAAAACCT-AATGAAAATAACAATTTTGTCTATTGTAAATGGCAGGTGATTGCAATAGATTTGGAAATCACTTTATATCTTATTATCTTTGTAAACCCCATAATGACTACTAATAAACAACATAAAGAATTTTCAGGTATAATTTTGGAAAAAATGTTAATGA- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145377753 203 - 190429646 CCTAAACATGCCTTTTAAAAATCTATATATCATTCATTTCAT-AAAAACTT-AATGAAAATAACAATTTTGTCTATTGTAAATGGCATGTGATTGCAACAGATTTGGAAATCACTTTATATCCTAT-ATCTTTGTGAACTTCATAATGACTACTAATAAACAACATAAAGAATTTTCAGTTATAATTTTGAAAAAAAATTTAATGA- i rheMac8.chr5 C 0 I 1 s macFas5.chr5 144403199 203 - 189454096 CCTAAACATGCCTTTTAAAAATCTATATATCATTCATTTCAT-AAAAACTT-AATGAAAATAACAATTTTGTCTATTGTAAATGGCATGTGATTGCAACAGATTTGGAAATCACTTTATATCCTAT-ATCTTTGTGAACCTCATAATGACTACTAATAAACAACATAAAGAATTTTCAGTTATAATTTTGAAAAAAAATTTAATGA- i macFas5.chr5 C 0 I 1 s macNem1.NW_012011022v1 3516531 203 + 39453387 CCTAAACATGCCTTTTAAAAATCTATATATCATTCATTTCAT-AAAAACTT-AATGAAAATAACAATTTTGTCTATTGTAAATGGCATGTGATTGCAACAGATTTGGAAATCACTTTATATCCTAT-ATCTTTGTGAACCTCATAATGACTACTAATAAACAACATAAAGAATTTTCAGTTATAATTTTGAAAAAAAATTTAATGA- i macNem1.NW_012011022v1 C 0 I 1 s cerAty1.NW_012002843v1 1138983 203 + 25348628 CCTAAACATGCCTTTTAAAAATCTATATATCATTCACTTCAT-AAAAACTT-AATGAAAATAACAATTCTGTCTATTATAAATGGCATGTGATTGCAACAGATTTGGAAATCACTTTATATCCTAT-ATCTTTGTGAACCTCATAATGACTACTAATAAACTACATAAAGAATTTTCAGGTATAATTTTGAAAAAAAATTTAATGA- i cerAty1.NW_012002843v1 C 0 I 1 s chlSab2.chr27 5149286 203 + 48547382 CCTAAACATGCCTTTTAAAAATGTATATATCATTCATTTCAT-AAAAAACT-AATGAAAATAACAATTTTGTATATTGTAAATGGCATGTGATTGCAACAGATTTTGAAATCACTTTATATCCTAT-ATCTTTGTGAACCTCATAATGACTACTAATAAATAACATAAAGAATTTTCAGGTATAATTTTGAAAAAAAAATTAATGA- i chlSab2.chr27 C 0 I 1 s manLeu1.NW_012102858v1 52446 203 + 130402 CCTAAACATGCCTTTTAAAAATCTATATATCATTCACTTCAT-AAAAACTT-AATGAAAATAACAATTTTGTCTATTATAAATGGCATGTGATTGCAACAGATTTGGAAATCACTTTATATCCTAT-ATCTTTGTGAACCTCATAATGACTACTAATAAACAACATAAAGAATTTTCAGGTATAATTTTGAAAAAAAATTTAATGA- i manLeu1.NW_012102858v1 C 0 I 1 s colAng1.NW_012120821v1 4190834 203 + 12320365 CCTAAACATGCTTTTAAAAAATTTATGTATCATTCCTTTCAT-AAAAACCT-AATGAAAATAACAATTTTGTCTATTGTAAATGGTATGTGATTGCAACAGATTTGGAAATCACTTTATATCCTAT-ATCTTTGTGAACCTCATAATGACTACTAATAAATAACATAAAGAATTTTCAGGTATAATTTTGAAAAAAGTTTTAATGA- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145652820 199 + 190850796 CTTAAACATGCCTTTTAAAAATTAATGTATCATTCCTTTCATAAAAAACTT-AATGAAAATAACAATTTTGTCTATTGTAAATGGCAGATGATTGCAACAGAT--GGAAATCACTTCATATCCTAT-ATCTTTGTGAAACCC---ATGACTACTAATAAATAACATAAAGAATTTTTAGGTATAATTTTGAAAATTTTTTAAATAA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14563681 201 + 15139346 CCTAAACATGTCTTTTAAAAATTAATATATCATTCCTTTCAT-AAAAACTT-TATGAAAATAACAATTTTATCTATTCTAAATGGCAGATGATTGCAACAGAT--GGAAATCACTTCATATCCCAT-ATGTTTGTGAACCCTATAATGACCACTAATAAATAACATAAAGAATTTTTAGGTATAATTTTGAAAAAGTTTTTAATAA- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 389613 201 + 3802414 CCTAAACATGTCTTTTAAAAATTAATATATCATTCCTTTCAT-AAAAACTT-AATGAAAATAACAATTTTGTCTATTGTGAATGGCAGATGATTGCAACAGGT--GGAAATCACTTCATATCCTAT-AACTTTGTGAACCCCATAACGACTACTAATAAATAACATAAAGAATTATTAGGTATAAGTTTGAAAAAGTTTTTAATAA- i cebCap1.NW_016107603v1 I 36 C 0 s aotNan1.NW_018493494v1 9749013 201 + 11631747 CCTAAACATGCCTTTTAAAAATTAATATATCATTCTTTTCAT-AAAAACTT-AATGAAAATACCAATTTTGTCTATTGTAAATAGCAGATGATTGCAACAGAT--GGAAATCACTTCATATCCTAC-ATCTTTGTGAACCCCATAATGACTACTAATAAATAACATAACGAATTTTTAGGTAAAATTTTGAAAAAGTTTTTAATAA- i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 108958 193 + 255898 CCTGAATTAGCCTTTTTAAAATT-ATCTGCCATTC--TTTAT-ATAAACTTAAATTCAAATAATAGCTTTGTCTGATGTAAATGGCAGACTATTCCAACAGAT--GGCAATCACCTTAAATCATGT-ATCCTTGTAAACCTCACAATGACTATTAATGAGCAACTTAAGGAATTTTT--GTGTAATTTTTTA-----TTTTAAAGGA i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 71469 4264 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I a score=53618.000000 s hg38.chr9_KI270719v1_random 132774 4 + 176845 TTTT s panTro5.chr4 86962804 4 + 194502333 TTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87739150 4 + 195804263 TTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 26016 4 + 36344 TTTT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42533033 4 + 85365473 TTTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145377957 4 - 190429646 TTTT i rheMac8.chr5 I 1 C 0 s macFas5.chr5 144403403 4 - 189454096 TTTT i macFas5.chr5 I 1 C 0 s macNem1.NW_012011022v1 3516735 4 + 39453387 TTTT i macNem1.NW_012011022v1 I 1 C 0 s cerAty1.NW_012002843v1 1139187 4 + 25348628 TTTT i cerAty1.NW_012002843v1 I 1 C 0 s chlSab2.chr27 5149490 4 + 48547382 TTTT i chlSab2.chr27 I 1 C 0 s manLeu1.NW_012102858v1 52650 4 + 130402 TTTT i manLeu1.NW_012102858v1 I 1 C 0 s colAng1.NW_012120821v1 4191037 4 + 12320365 TTTT i colAng1.NW_012120821v1 C 0 I 1 s rhiBie1.NW_016814732v1 75733 4 + 665040 TTTT i rhiBie1.NW_016814732v1 I 4264 I 5305 s calJac3.chr3 145653019 4 + 190850796 CTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14563882 4 + 15139346 TTTT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 389814 4 + 3802414 TTTT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9749214 4 + 11631747 TTTT i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 109151 4 + 255898 TTTT i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I a score=1951016.000000 s hg38.chr9_KI270719v1_random 132778 197 + 176845 GTGCTTCTAGGCCAAATCTGCAATACAATCCTTCATAAGAT-TGTACT----TTGAAACTCTCGTTGTCATCTGACATATGCAGATAATAGAGAAATATAATCCCCTTTCTAAATGTTTACATTCTCTCCCTGGTACGAATTAGCTTGCTGGAAACATCAGTAATCACTGA--CATAAAGATCCCACTATTAAATAAAACTG---AT s panTro5.chr4 86962808 197 + 194502333 GGGCTTCTAGGCCAAGTCTGCAATATAACCCTTCATAAGAT-TGAACT----TTGAAACTCTGGTTGTCATCTGACATATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGTTTACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTCAGCAATCACTGA--CATAAGGATCCTGCTATTAAATAAAACTG---AT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87739154 197 + 195804263 GGGCTTCTAGGCCAAGTCTGCAATATAACCCTTCATAAGAT-TGAACT----TTGAAACTCTGGTTGTCATCTGACATATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGTTTACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTCAGCAATCACTGA--CATAAGGATCCTGCTATTAAATAAAACTG---AT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 26020 197 + 36344 GGGCTTCTAGGCCAAATCTGCAATACAATCCTTCATAAGAT-TGTACT----TTGAAACTCTCGTTGTCATCTGACATATGCAGATAATATAGAAATATAATCCCCTTTCTAAATGTTTACATTGTCTCCCTGGTACGAATTAGCTTGCTGGAAACATCAGTAATCACTGA--CATAAAGATCCCACTATTAAATAAAACTG---AT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42533037 197 + 85365473 GGGCTTCTAGGCCAAGTCTGCAATATAACCCTTCATGAGAT-TGAACT----TTGAAACTCTCGTTGTCATCTGACATATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGTTAACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTCAGCAATCACTGA--CATAAAGATCCTGCTATTAAATAAAACTG---AT i nomLeu3.chr20 C 0 I 598 s rheMac8.chr5 145377961 197 - 190429646 GGGCTTCTAGGCCAACTCTGCAATATAACCCTTCAAAAGAT-TGAACT----TTGAAACTCTGGTTGTCATCTGACATATGCAAACACAACAGAAATATAACCCCCTTTCTAAATGTTTACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTTAGCAATCACTGA--CATAAAGATCCTGCTATTACACAAAACTG---AT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144403407 197 - 189454096 GGGCTTCTAGGCCAACTCTGCAATATAACCCTTCAAAAGAT-TGAACT----TTGAAACTCTGGTTGTCATCTGACATATGCAGACAGAACGGAAATATAACCCCCTTTCTAAATGTTTACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTTAGCAATCACTGA--CATAAAGATCCTGCTATTACACAAAACTG---AT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3516739 197 + 39453387 GGGCTTCTAGGCCAACTCTGCAATATAACCCTTCAAAAGAT-TGAACT----TTGAAACTCTGGTTGTCATCTGACATATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGTTTACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTTAGCAATCACTGA--CATAAAGATCCTGCTATTACACAAAACTG---AT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1139191 197 + 25348628 GGGCTTCTAGGCCAACTCTGCAATATAACCCTTCAAAAGAT-TGAACT----TTGAAACTCTGGTTGTCATTTGACATATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGTTTACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTTAGCAATCACTGA--CACAAAGATCCTGCTATTAAACAAAACTG---AT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5149494 197 + 48547382 GGGCTTCTAGGCCAACTCTGCAATATAACCCTTCATAAGAT-TGAACT----TGGAAACTCTGGTTGTCATCTGACATATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGTTTACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTTAGCAATCACTGA--CATAAAGATCCTGCTATTAAACAAAACTG---AT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 52654 197 + 130402 GGGCTTCTAGGCCAACTCTGCAATATAACCCTTCAAAAGAT-TGAACT----TTGAAACTCTGGTTGTCATTTGACATATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGTTTACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTTAGCAATCACTGA--CATAAAGATCCTGCTATTAAACAAAACTG---AT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4191042 196 + 12320365 GGGCTTCTAGGCCAAGTCTGCAATATAACCCTTCATAAGAT-TGAACT----TTGAAACTCTGGCTGTCATCTGACATATGCAGACAGAACAGAAATATAACCCCCTGTCTAAATGTTTACATTGTCTCCCTGGTACAAATTAGCTTGTTGGAAACTTCAGCAATCACTGA--CATAAAGATCCTGCT-TTAAACAAAACTG---AT i colAng1.NW_012120821v1 I 1 C 0 s calJac3.chr3 145653023 186 + 190850796 GGGCTTCTAGGCC---------ATATAACCCTTCATAAAAC-TGAACT----TTGAAACTCTGGTTGTCATCTGAC--ATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGATTACATTGTCTCCCTGATTCAAATTAGCTTGTTGGAAACTTAACCAATCACTGA--CATAAAGATCTCTCTATTAAATAAAAGTG---AT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14563886 188 + 15139346 GGGCTTCTAGGCC---------ATATTACCCTTCATAAAAT-TGAACT----TTGAAACTCTGGTTGTCATCTGACATATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGATTACATTGTCTCCCTGATTCAAATTAGCTTGTTGGAAACTTAACCAATCACTGA--CATAAAGATCCCACTACCAAATAAAACTG---AT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 389818 179 + 3802414 GGGCTTCTAGGCC---------ATATAACCCTTCAAAAAAT-TGAACT----TTGAAAGTCTGGTTGTCATCTGTCATATGCAGACAGAACAGAAATATAACTCCCTTTCTAAA---------TGTCTCCCTGATTCAAATTAGCTTATTGGAAACTTAACCAATCGCTGA--CATAAAGATCCTGCTATCAAATAAAACTG---AT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9749218 188 + 11631747 GGGCTTCTAGGCC---------ATATAACCCTTCATAAAAT-TGAACT----TTGAAACTCTGGTTGTCATCTGACATATGCAGACAGAACAGAAATATAACCCCCTTTCTAAATGATTACATTGTCTCCCAGATTCAAATCAGCTTGTTGGAAACTTAACCAATCACTGA--CATAAAGATCCCACTATCAAATAAAACTG---AT i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 109155 199 + 255898 GAACCTGCCTGACAACTCTTTAACCTTACTCTTCATAAGATATGAATTAATATTATTATTCATAGTATCATCTGACATATGTAGA----ACAGAAATGTAACTCCCTTTTtaaacttttacattgta-cccaagttaaaattagc-tattggaaactgca--aatcattgactcgtgtatatcctgctgttggttaaagctatgtat i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I a score=67177.000000 s hg38.chr9_KI270719v1_random 132975 7 + 176845 ACTTTTT s panTro5.chr4 86963005 7 + 194502333 ACttttt i panTro5.chr4 C 0 I 601 s panPan2.chr4 87739351 7 + 195804263 ACttttt i panPan2.chr4 C 0 I 605 s gorGor5.CYUI01002260v1 26217 7 + 36344 ACTTTTT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42533832 7 + 85365473 ACTTTTT i nomLeu3.chr20 I 598 C 0 s rheMac8.chr5 145378158 7 - 190429646 ACTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144403604 7 - 189454096 ACTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3516936 7 + 39453387 ACTTTTT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1139388 7 + 25348628 ACTTTTT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5149691 7 + 48547382 ACTTTTT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 52851 7 + 130402 ACTTTTT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4191238 7 + 12320365 ACATTtt i colAng1.NW_012120821v1 C 0 I 609 s calJac3.chr3 145653209 5 + 190850796 AC--TCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14564074 7 + 15139346 ACTTTTT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 389997 7 + 3802414 GCTTTTT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9749406 7 + 11631747 ACTTTTT i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 109354 7 + 255898 tcttttt i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I a score=-1450.000000 s hg38.chr9_KI270719v1_random 132982 1 + 176845 -A s gorGor5.CYUI01002260v1 26224 1 + 36344 -A i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42533839 1 + 85365473 -A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145378165 1 - 190429646 -A i rheMac8.chr5 C 0 I 606 s macFas5.chr5 144403611 1 - 189454096 -A i macFas5.chr5 C 0 I 602 s macNem1.NW_012011022v1 3516943 1 + 39453387 -A i macNem1.NW_012011022v1 C 0 I 606 s cerAty1.NW_012002843v1 1139395 1 + 25348628 -A i cerAty1.NW_012002843v1 C 0 I 606 s chlSab2.chr27 5149698 1 + 48547382 -A i chlSab2.chr27 C 0 I 605 s manLeu1.NW_012102858v1 52858 1 + 130402 -A i manLeu1.NW_012102858v1 C 0 I 606 s calJac3.chr3 145653214 1 + 190850796 -A i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14564081 1 + 15139346 -T i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 390004 1 + 3802414 -A i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9749413 1 + 11631747 -A i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 109361 1 + 255898 t- i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87739358 605 + 195804263 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I e colAng1.NW_012120821v1 4191245 609 + 12320365 I e panTro5.chr4 86963012 601 + 194502333 I a score=2030.000000 s hg38.chr9_KI270719v1_random 132983 11 + 176845 AAAACATGCAG-- s gorGor5.CYUI01002260v1 26225 11 + 36344 AAAACATGCAG-- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42533840 6 + 85365473 AAATCA------- i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144404214 6 - 189454096 AAGTCA------- i macFas5.chr5 I 602 C 0 s calJac3.chr3 145653215 9 + 190850796 --AAAATGCAG-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14564082 9 + 15139346 --AAAATGCAG-- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 390005 9 + 3802414 --AAAATGCAG-- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9749414 9 + 11631747 --AAAATGCAG-- i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 109362 13 + 255898 gtaatatgcactg i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87739358 605 + 195804263 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I e colAng1.NW_012120821v1 4191245 609 + 12320365 I e manLeu1.NW_012102858v1 52859 606 + 130402 I e chlSab2.chr27 5149699 605 + 48547382 I e cerAty1.NW_012002843v1 1139396 606 + 25348628 I e macNem1.NW_012011022v1 3516944 606 + 39453387 I e rheMac8.chr5 145378166 606 - 190429646 I e panTro5.chr4 86963012 601 + 194502333 I a score=1929296.000000 s hg38.chr9_KI270719v1_random 132994 196 + 176845 CAAATAAGCAA---------------CATTTCATAAAACaacacaggattttatatgttccccactccattagaggctattatgctgaattggatcctcattccaacctgtgtccatattttagggttgaaatagtct-aaaacccaacatttactgttctcctgttgtgatatctatatatctaatatgttcacattctctgtattcatct s panTro5.chr4 86963613 195 + 194502333 CAAATAAACAA---------------CATTTCATAAAGCaacacaggattttatatcttccc-attccattagatgctattatgctgaattggaacctcattccaacctgtgtcaatattttagggttgaaatagtct-aaaatataatctttactgttctcctgttgtgatatctatatatttaatatgttcacattctctgtcttcacct i panTro5.chr4 I 601 C 0 s panPan2.chr4 87739963 195 + 195804263 CAAATAAACAA---------------CATTTCATAAAGCaacacaggattttatatcttccc-attccattagatgctattatgctgaattggaacctcattccaacctgtgtcaatattttagggttgaaatagtct-aaaatataatctttactgttctcctgttgtgatatctatatatttaatatgttcacattctctgtcttcacct i panPan2.chr4 I 605 C 0 s gorGor5.CYUI01002260v1 26236 196 + 36344 CAAATAAGCAA---------------CATTTCATAAAGCaacacaggattttatatgttccccactccattagaggctattatgctgaattggatcctcattccaacctgtgtccatattttagggttgaaatagtct-aaaacataacatttactgttctcctgttgtgatatctatatatctaatatgttcacattctctgtattcatct i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42533846 193 + 85365473 --AATAAACAA---------------CACTTCATAAAGCaacacaggattttatatcttccc-attccattaggtgctattatgctgaattggaacctcattccaacctgtgtcaatattttagggttgaaatagtct-aaaataaaatccttactgttctactgttgtgatgtctatatatttaatatgttcacattctctgtcttcatct i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145378772 195 - 190429646 CAAATAAACAA---------------CATTTCATAAAGCAGCAcaggattttgtatcttccc-attccattagatgctattatgctgaattggaacctcattctaacccgtgtcaatattttagggttgaaacagtct-aaaacataatagttactgttctcctcttgtgatacctatatatttaatatgttcacattctctgtcttcacct i rheMac8.chr5 I 606 C 0 s macFas5.chr5 144404220 193 - 189454096 --AATAAACAA---------------CATTTCATAAAGCAGCAcaggattttgtatcttccc-attccattagatgctattatgctgaattggaacctcattctaacccgtgtcaatattttagggttgaaacagtct-aaaacataatagttactgttctcctcttgtgatatctatatatttaatatgttcacattctctgtcttcacct i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3517550 195 + 39453387 CAAATAAACAA---------------CATTTCATAAAGCAGCAcaggattttgtatcttccc-attccattagatgctattatgctgaattggaacctcattctaacccgtgtcaatattttagggttgaaacagtct-aaaacataatagttactgttctcctcttgtgatatctatatatttaatatgttcacattctctgtcttcacct i macNem1.NW_012011022v1 I 606 C 0 s cerAty1.NW_012002843v1 1140002 195 + 25348628 CAAATAAACAA---------------CATTTCATAAAGCaacacaggattttgtatcttccc-attccattagatgctattatgctgaattggaacctcattctaacccgtgtcaatattttagggttgaaacagtct-aaaacataatatttactgttctcctcttgtgatatctatatatttaatatgttcacattctctgtcttcacct i cerAty1.NW_012002843v1 I 606 C 0 s chlSab2.chr27 5150304 195 + 48547382 CAAATAAACAA---------------CATTTCATAAAGCaacacaggattttgtatcttccc-attccattagatgctattatgctgaattagaacctcattctaacccgtgtcaatattttagggttgaaacagtct-aaaacataatatttactgttctcctcttgtgatatctatatatttaatatgttcacattctctgtcttcacct i chlSab2.chr27 I 605 C 0 s manLeu1.NW_012102858v1 53465 195 + 130402 CAAATAAACAA---------------CATTTCATAAAGCaacacaggattttgtatcttccc-attccattagatgctattatgctgaattggaacctcattctaacccgtgtcaatattttagggttgaaacagtct-aaaacataatatttactgttctcctcttgtgatatctatatatttaatatgttcacattctctgtcttcacct i manLeu1.NW_012102858v1 I 606 C 0 s colAng1.NW_012120821v1 4191854 195 + 12320365 CAAATAAACAA---------------CATTTCATAAAGCaacacaggattttgtatcttccc-attccattagatgctattgtgctgaattggaacctcattctaacccgtgtcaatattttagggttgaaatagtct-aaaacatagtatttactgttctactcttgtgatatctatatatttaatatgttcacattctctgtcttcacct i colAng1.NW_012120821v1 I 609 C 0 s calJac3.chr3 145653224 196 + 190850796 CAAATAAGCAC---------------CATTTCATAAAGCaacacacaattttatatgttccctattccattagatgctattatgttgaattggatcctcagtccatcctgtgtcaatattttatcattgaaatagtct-aaaacataatatttacaattctcctgctgtaatagtcatatatttaatatgttcacattctctgtgtttatcc i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14564091 194 + 15139346 CAAATGAGCAC---------------CATTTCATAAAGCaacacacaattttatatgcttcccattccattagatgctattgtgttgaatttgatcctcagtccaacc--tgtcaatattttatcactgaaatagtct-aaaacataatatttactattgttctgttgtaatagccatatatttaatatgttcacattctttgcgtttatct i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 390014 196 + 3802414 CAAATAAGCAC---------------CATTTCATAAAGaaacacacaattttatatgttccccattccattagatgctattatgttgaatttgatcctcagtccaacctgtgtcaatattttatcattgaaatagtct-aaaacatactatttactattctcctgttgtaatagtcatatatttaatatgttcacattctctgtgtttatct i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9749423 196 + 11631747 CAAATAAGCAC---------------CATTTCATAAAGCaacacacaattttgtatgtttcccattccattagatgctattatgttgaatttgatcctcagtccaacctgtgtcaatattttgtcattgaaatcatct-aaaacataatatttactattctcctgttgtaatagtcatatatctaatatgttcacattctctgtgtttatct i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 109375 212 + 255898 ctcttaagcaagattccctgtatttgcatttcataaagaattgcaagatattatatgactctcattcccttagattttatcatgttaaattagatcattactccaatttgtgttaatattttagggttgtaaaactctcacaaagtaatatttactcttcttccattgtatcaaccatatatttaatatatatgctttctgtttgttcatct i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I a score=13923.000000 s hg38.chr9_KI270719v1_random 133190 1 + 176845 a s panTro5.chr4 86963808 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 87740158 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 26432 1 + 36344 a i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42534039 1 + 85365473 a i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145378967 1 - 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144404413 1 - 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3517745 1 + 39453387 a i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1140197 1 + 25348628 a i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5150499 1 + 48547382 a i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 53660 1 + 130402 a i manLeu1.NW_012102858v1 C 0 C 0 s nasLar1.chr5 135646899 1 - 174288623 a i nasLar1.chr5 N 0 N 0 s colAng1.NW_012120821v1 4192049 1 + 12320365 a i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145653420 1 + 190850796 a i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14564285 1 + 15139346 a i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 390210 1 + 3802414 a i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9749619 1 + 11631747 a i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 109587 1 + 255898 a i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I a score=5492108.000000 s hg38.chr9_KI270719v1_random 133191 596 + 176845 tgttaatatatttaaaaaggaaaagaaagggggctttaggaagaactttacatcacacgtcagagtaaacatcaaatcaagtt------atcaatttact--aataaacccatt--taagaaaaaa-tattcagctagagagcaattaaccttattgtctttgtgtctgatccatatttctccacctgatacatggaaataacca---gagagatactataaaatacctcaggtgcattgttgaaagtaatttcctgctttt-gtgggataactgaaacataaacgtaaataagatagtttgAAA------------------------------------GTTCACTTTCTCATCAATGCTCAAATAATTTATTCTAATAAAGCCCAGCAAAACTTAGCTTGTAATGCCATCAAGGTAAA-------TATATTCATGAAGTACTCACTTGCTAA----ATTTTTAAACACAATACATTATCTCATC--TTTAATTTTTAGTTGTtatttcaattatccattgctgtgtat--agcagtcatcaaacttagttggttaaaacacaaactcacaatttgttaactttggttgagc--tcagGAGGATAATATTCGGAGTCTTGCCTAGGTTTCCTTATATGACTGACAAGGCCTACATAGTCCAA s panTro5.chr4 86963809 602 + 194502333 tattaataatatgaaaaaggaaaagaaagggggctttaggaagaacttcacgtcacacgtcagagtaaacatcaaatcaagttgtcatcatcaatttact--aataaacccatt--taagaaaaaa-tattcagctggagagcaatgaatcttattgtcttttcatctgatccatatttctccacctgagacatc-aaataacca---gagagttcttgtaaaatacctcaggtacattgttgaaagtaatttcctgctttc-gtgggataacggaaacataaatgtaaataaggtaggttGAAA------------------------------------GTTCAGTTTCTCATCAATGCCCGAATAATTTGTTCTAATAAAGCCCAGTAAAACTCAGCTTGTAATACCATCAAGGTAAA-------TATATTCATGAAGTACTCACTTGCTAA----ATTTTTAAACATGATACATTATCTCAGC--TTTAATTTTTAGTTGt-atttcaattatccattgctgtgtaataagcagtcatcagacttagttgcttaaaacagaaactcacaatttgttaattttggctgggc--ccaggaggataatattctgagtcttgcctaggtttccttatTTGACTGACAAGGCCTATATAGTCCAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87740159 602 + 195804263 tattaataatatgaaaaaggaaaagaaagggggctttaggaagaacttcacgtcacacgtcagagtaaacatcaaatcaagttgtcatcatcaatttact--aataaacccatt--taagaaaaaa-tattcagctggagagcaatgaatcttattgtcttttcatctgatccatatttctccacctgagacatc-aaataacca---gagagttcttgtaaaatacctcaggtacattgttgaaagtaatttcctgctttc-gtgggataacggaaacataaatgtaaataaggtaggttGAAA------------------------------------GTTCAGTTTCTCATCAATGCCCGAATAATTTGTTCTAATAAAGCCCAGTAAAACTCAGCTTGTAATACCATCAAGGTAAA-------TATATTCATGAAGTACTCACTTGCTAA----ATTTTTAAACATGATACATTATCTCAGC--TTTAATTTTTAGTTGt-atttcaattatccattgctgtgtaataagcagtcatcagacttagttgcttaaaacagaaactcacaatttgttaattttggctgggc--ccaggaggataatattctgagtcttgcctaggtttccttatTTGACTGACAAGGCCTATATAGTCCAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 26433 601 + 36344 tgttaataattttaaaaaggaaaagaaagggggctttaggaagaactttacatcacacgtcagagtaaacatcaaatcaagttgtc---atcaatttact--aataaacccatt--taagaaaaag-tattcagctagagagcaatgaaccttattgtctttgtgtctgatccatatttctccacctgatacatggaaataacca---gagagttactataaaatacctcaggtgcattgttgaaagtaatttcctgctttt-gtgggataactgaaacataaacgtaaataagatagtttgAAA------------------------------------GTTCACTTTCTCATCAATGCTCAAATAATTTGTTCTAATAAAGCCCAGTAAAACTTAGCTTGTAATGCCATCAAGGTAAA-------TATATTCATGAAGTACTCACTTGCTAA----ATTTTTAAACACAATACATTATCTCATC--TTTAATCTTTAGTTGTtatttcaattatccattgctgtgtaattagcagtcatcaaacttagttgcttaaaacacaaactcacaatttgttaactttggttgagc--tcaggaggataatattcggagtcttgcctaggtttccttatatgactgacaaggcctacatagtccaa i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42534040 600 + 85365473 tattaataattttaaaaaggaaaagaaagggggctttaggaagaacttcacatcacatgtcagagtaaacatcaaatcaag-tgttatcatcaatttact--aataaacccatt--taagaaaaag-cattcagctggagagcagtgaatcttattgtcttttcat-tgatccatatttctccacctgagacatc-aaataacca---gagagttcttgtaaaatacctcagatacattgttgaaagtgatttcctgctttc-gtgggataaccgaaacataaatgtaaataaggtagtttgAAA------------------------------------GTTCACTTTCTCATCAATGCCCGAATAATTTGTTCTAATAAAACCCAGCAAAACTTAGCTTGTGATGCCATCAAGGTAAA-------TATATTCGTGAAGTACTCACTTGCTAA----ATTTTTAAACATGATACATTATCTCAGC--TTTAATTTTTAGTTGt-atttcaattatccgttgctgtgtactaagcagtcatcaaaattagttgcttaaaacaggaactcacaatctgttaattttggctgggc--tcaggaggataatattctgagtcttgcctaggtctccttgtatgactgacaaggcctatatagtccaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145378968 601 - 190429646 tattaataattttaaaaaggaaaagagaggtggctttaggaagaacttcacattacacatcagagtaaataccaaatcatt--------ttcaatttactaaaataaatcaatt--taagaaaaaagtattcagctggagagcaatgaaccttattgtcatttcatctgatccgtatttctccacctgagacatggaaataacca---gagagttattgtaaaatacctcaggtacattgttgaaagtaatttcctgctttc-atgggataatcgaaacataaatgtaaataaggtagcttgAAA------------------------------------GTTCACTTTCTCATCAATGCCCAAACAATTTTTTCTAATAAAGCCCAGTAAAACTTAGCTTGTAATGCCATCAAGGTAAA-------TGTATTCATGAAGTACTCACTTGCTAA----ATTTTTAAATATGATACATTATCTGAGC--TTTAATTTTTAGTTGTtatttcaattatccattgctgtataataagcagtcatcacacttagttgattaaaacagaaacTCACAATTTGTTAATTTTGGCTGGATAATTAGGAGGATAATATTCTGAGTCTTGCCTAGGTTTGCTTATATGACTTACAAGGCCTATATAATCCAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144404414 599 - 189454096 tattaataattttaaaaaggaaaagagaggtggctttaggaagaacttcacattacacatcagagtaaataccaaatcatt--------ttcaatttactaaaataaatcaatt--taagaaaaaagtattcagctggagagcaatgaaccttattgtcatttcatctgatctgtatttctccacctgagacatggaaataacca---gagagttattgtaaaatacctcaggtacattgttgaaagtaatttcctgctttc-atgggataatcgaaacataaatgtaaataaggtagcttgAAA------------------------------------GTTCACTTTCTCATCAATGCCCAAACAATTTTTTCTAATAAAGCCCAGTAAAACTTAGCTTGTAATGCCATCAAGGTAAA-------TGTATTCATGAAGTACTCACTTGCTAA----ATTTTTAAATATGATACATTATCTGAGC--TTTAATTTTTAGTTGTtatttcaattatccattgctgtataataagcagtcatcacacttagttgcttaaaacagaaactcacaatttgttaattttggctgggc--tcagGAGGATAATATTCTGAGTCTTGCCTAGGTTTGCTTATATGACTTACAAGGCCTATATAATCCAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3517746 599 + 39453387 tattaataattttaaaaaggaaaagagaggtggctttaggaagaacttcacattacacatcagagtaaataccaaatcatt--------ttcaatttactaaaataaatcaatt--taagaaaaaagtattcagctggagagcaatgaaccttattgtcatttcatctgatccatatttctccacctgagacatggaaataacca---gagagttattgtaaaatacctcaggtacattgttgaaagtaatttcctgctttc-atgggataatcgaaacataaatgtaaataaggtagcttgAAA------------------------------------GTTCACTTTCTCATCAATGCCCAAACAATTTTTTCTAATAAAGCCCAGTAAAACTTAGCTTGTAATGCCATCAAGGTAAA-------TGTATTCATGAAGTACTCACTTGCTAA----ATTTTTAAATATGATACATTATCTGAGC--CTTAATTTTTAGTTGTCAtttcaattatccattgctgtataataagcagtcatcacacttagttgctttaaacagaaactcacaatttgttaattttggctgggc--tcaggatgataatattctgagtcttgcctaggtttgcttatatgacttacaaggcctatataatccaa i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1140198 597 + 25348628 tattaataattttaaaaaggaaaagagaggtggctgtaggaagaacttcacattatacatcagagtaaataccaaatcatt--------atcaatttact--aataaatcaatt--taagaaaaaagtattcagctggagagcaatgaaccttattgtcatttcatctgatccatatttctccacctgagacatggaaataacca---gagagttattgtaaaatacctcagatacattgttgaaagtaatttcctgctttc-atgggataatcgaaacataaatgtaaataaggtagcttgAAA------------------------------------GTTCACTTTCTCATCAATGCCCAAACAATTTTTTCTAATAAAGCCCAGTAAAACTTAGCTTGTAATGCCATCAAGGTAAA-------TGTATTCATGAAGTACTCACTTGCTAA----ATTTTTAAATATGATACATTATCTGAGC--TTTAATTTTTAGTTGTtatttcaattatccattgctgtataataagcagtcatcacatttagttgcttaaaacagaaactcacaatttgttaattttggctgggc--tcaggaggataatattctgagtcttgcctaggtttgcttatATGATTTACAAGGCCTATATAATCCAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5150500 597 + 48547382 tattaataattttaaaaaggaaaagagaggtggctttaggaagaacttcacattacacatcagagtaaatatcaaatcatt--------atcaatttact--aataaatcaatt--taagaaaaaagtattcagctggagagcaatgaaccttattgtcatttcatctgatccatatttctccacctgagacatggaaataacca---gagagttattgtaaaatacctCAGGTACATTGTTGAAAGTAATTTCCTACTTTC-ATGGGATAATCAAAACATAAATGTAAATAAGGTAGCTTGAAA------------------------------------GTTCACTTTCTCATCAATGCCCAAATAATTTTTTCTAATAAAGCCCAGTAAAACTTAGCTTGTAATGCCATCAAGGTAAA-------TGTATTCATGAAGTACTCACTTGCTAA----ATTTTTAAATATGATATATTATCTGAGC--TTTAATTTTTAGTTGTtatttcaattatccattgctgtataataagcagtcatcacacttagttgcttaaaacagaaactcacaatttgttaattttggctgggc--tcaggaggataatattctgagtcttgcctaggtttgcttatatgacttacaaggcctatataatccaa i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 53661 597 + 130402 tattaataattttaaaaaggaaaagagaggtggctttaggaagaacttcacattacacatcagagtaaataccaaatcatt--------atcaatttact--aataaatcaatt--taagaaaaaagtattcagctggagagcaatgaaccttattgtcatttcatctgatccatatttctccacctgagacatggaaataacca---gagagttattgtaaaatacctcaggtacattgttgaaagtaacttcctgctttc-atgggataatcgaaacataaatgtaaataaggtagcttgAAA------------------------------------GTTCACTTTCTCATCAATGCCCAAACAATTTTTTCTAATAAAGTCCAGTAAAACTTAGCTTGTAATGCCATCAAGGTAAA-------TGTATTCATGAAGTACTCACTTGCTAA----ATTTTTAAATATGATACATTATGTGAGC--TTTAATTTTTAGTTGTTATTtcaattatccattgctgtataataagcagtcatcacacttagttgcttaaaacagaaactcacaatttgttaattttggctgggc--tcaggaggataatattttgagtcttgcctaggtttgcttatATGACTTACAAGGCCTATATAATCCAA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4192050 596 + 12320365 tattaataattttaaaaaggaaaagaaaggtggctttaggaagaacttaacatcgcacatcagagtaaatatcaaataatt--------atcaatttact--aataaatcaatt--taagaaaaaagtattcagctggagagcaatgaaccttattgtcatttcatctgatccatatttctctccctgagacatggaaataacca---gagagctattgt-aaatacctcaggtacattgttgaaagttatttcctgctttc-atgggataaccgaaacataaatgtaaataaggtagcttgAAA------------------------------------GTTCACTTTCTCATCAATGCCCAAATAATTTTTTCTAATAAAACCCAGTAAAACTTAGCTTGTAGTGCCATCAAGGTAAA-------TGTATTCATGAAGTACTCACTTGCTAA----ATTTTTAAATATGATACATTATCTGAGC--TTTAATTTTTAGTTGTTATTCcaattatccattgctgtataataagcagtcatcaaacttagttgcttaaaacagaaactcacaattggttaattttggccgggc--tcaggaggataatattctgagtcttgcctaggtttgcttaCATGACTTACAAGGCCTATATAATCCAA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145653421 563 + 190850796 tattgataatgttaaaaaggaaaagaaaggggtctataggaagaactttacatcacaagtcagaatgaacatcaaatcaagctgtc---atcagtttact--aataaacccatt--taagaaaaat-tattcagctggagagcaatgaaccttattgtctttgcatctgatccatatttctctacttgatacgtggaaataaccagaggagagttcttgtaaaatacctCAGGTACACTGTTGAAAGTAATTTCCTGCTTTT-ATGGAATAACTGAAATATAAACGTAAATAAGATAGTTTGAAA------------------------------------GGTCAGTTTCTAATCAATGCCCAAATAATTTGTCCTG-------------TAACTTCGTTTGTAATGCAATTAAGGTAAA-------TATATTTATGAAGTACTCACTTGCTAA----ATTTAT-AACACAATATGTTATCTCATC--TTTAATTTTTAGTTGTTATTTCAAT------------------AAGCAGCCATCAACCTTAGTTGCTTAAAACAAAAACCCATAATTTGTTAATTTTTGTTGGGT--TCAGAAGGATAACATTCTGAGTC---------TTTCCTTATATGACTGATAAGGCTTATATAGTCCAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14564286 560 + 15139346 tactgataatttt-aaaaggaaaagaaagggatctataggaagaactttacatcacacgtcagagtgaacatcaaattgagttgtc---atcaatttact--aataaacccatt--taagaaaaat-tattcagctgcagagcaatgaaccttattgtctttgcatctgatccgtatttctctacttgatacatggaaataaccagaggagcattcttgtgaaataccGTAGGTACACTGTTGAAAGTAATTTCCTGCTTTT-GTGGGATAACTGAAACATAAACGTAAATAAGAGGGTTTGAAA------------------------------------GGTCAGTTTCTCATCAATGCCCAAATAATTTGTTCTA-------------TAACTTTGCTTGTAATGCAGTTAAGGTAAA-------TATATTTATGAAGTACTCACTTGCTAA----GTTTAT-AACACAATATATTATCTCATC--TTTAATTTTTAGTTGTTATTTCAAT------------------AAGCAGCCATCAAACTTAGTTGCTTAAAACAAAAA--CACAATTTGTTATTTTTTGTTGGGC--TCAGTTGGATAACATTCTGAGTC---------TTTCCTTATATGACTGATAAGGCCTATATAGTCCAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 390211 557 + 3802414 tattgataattttaaaaatgaaaataaaggggtctataggaagaactttacatcaca---tagagtgaacatcaaatcaagttgtc---atcaatttact--aataaactcatt--taagaaaaat-tactcagctggagagcaatgaaccttattgtttttgcatctgatccatatttctctacttgatacatggaaataaccagaggagagttcttgaaaaatacttcaggtacactgttgatagtaatttcctgcttttaatgggataactgaaacagaaacgtaaataagatggtttgAAA------------------------------------GGTCAGTTTCTCATCAATGCCCAAATAATTTGTTCTA-------------TAACT----TTGTGATGCAATTAAGGTAAA-------TATATTTATGAAGTACTCACTTGCTAA----ATTTAT-AACACAATATATTATCTCGTC--TTTAATTTTTAGTTGTTGTTTTAAT------------------AAGCAGCCATCAAACTTAGTTGCTTAAAACAAAAACTCATAATTTGTTAATTTTTGTTGGGC--TCAGGAGGATAACATTCTGAGCC---------TTTCCTTATATGGCTGATAAGGCCTATATTGTCCAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9749620 561 + 11631747 tattgataattttaaaaaggaaaagaaaggggtctataggaagaactttacatcacagttcagagtgaacatcagctcgagttgtc---atcaatttact--aataaacccatt--taagaaaaat-tattcagctggagagcaatgaaccttattgtctctgtatctgatccatatttctctacttgatacatggaaataaccagaggagagttcttgtaacatacctcaggtacactgttgaaagtaatttcctgctttT-GTGGAACAACTGAAACATAAACATAAATAAGATGGTTTGAAA------------------------------------GGTCAGTTTCTCATCAATGCCCAAATAATTTGTTCTA------------TTAACTTTGCTTGTAATGCAATTAAGGTAAA-------TATATTTATGAAGTACTCACTTGCTAA----ATTTAT-AACACAATATATTATCTCATC--TTTAATTTTTAGTTGTTATTTCAAT------------------AAGCAGCCATCAAATTTAGTTGCTTAAAACAAAAACTAACAATTTGTTAATTTTTGCTGGGC--TCAAGAGGATAACATTCTGA------------TTTCCTTATATGACTGATAAAGGCTATATAGTCCAA i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 109588 646 + 255898 tatttatgact---aagaaaaagagaaagagggccacagcaagaatactccctcacacacaagaataagtattaaatgaaatggtc---ttggatttatt--aattggcatattgggaggtacaat-tattcaaatggagagcaatgtagtttactgtc-ttgcatccaacccatatttctctatccgatgcatgaaaatgacgt---gagag-tcttgtaaaatacctcagatacactattggtaccaacatcttgctttt-acaggaaaattgaagcaaagaagtaagtaagataatgtgaaatgctttattataagtaagtgtatgctgttccccaatgagcaatactttatcaatgtccaaataactttttctaataattataagtaaaatttagcct-taatgacatcaagattaatgatctgtatttttatgaaatactcctgtggtcattctctttctaaagtcagaatatcttttgaccatttttaattttGGTTATCACTTTgattatccatcactgtgaaaccaacaactccaaaatttagttccttaaagtaacaactcacaatttggtaatttgtgctgggc--ttagtaggatgttattctgAGTTTTGCCTAGGTTTACTCATGTGATTGACTGGAGCTGTTCGGTCCAA i dasNov3.JH575793 C 0 I 451 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I a score=2623889.000000 s hg38.chr9_KI270719v1_random 133787 276 + 176845 AGTGACATCACTCAAATATCTGGCAGTTCACTGGTGCTATCAGCTG---------GGTTCTCCTCCACTTAGTCTCTCTAGTAGAGTAGATCAGG-TTCTCATTTGGCA-TTGGTGCCATTTTAATTTGCCAAGCCTAAATTTACTATCATTTGTCAAGTGT-CTATTAAGTCAGTGTCAGAGAGGGCTATATAACGATATGGCTATGAGGAGACTTAATAAATCGAGGGTTCTTTGATATAACAGGCTACCCAGTTACATTTCTTGTTCTAAAGATTTTTTCAGATA s panTro5.chr4 86964411 275 + 194502333 AGTGACATCACTCAAATATGGGGCAGTTCAGTGGTGCTATCAGCTG---------GGTTCTCCTCCG-TTAGTCTCTCTGGTAGCATAGATCAGG-TTCTCAGTTGGCA-TTGGTGCCTTTTTAATTTGGCAAGCCTAAATTCACTATCATTTATCAAGTGT-CTGTTAAGTCAGTGTCAGAGAGGACTATACAAGGATATGGATATGAGGAGACTTAATACATTTAGGGTTCTTTGATATAGCAGGCTATCCAGTTACATTTCCTGTTCTAAACATTTTTTCAGATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87740761 275 + 195804263 AGTGACATCACTCAAATATGGGGCAGTTCAGTGGTGCTATCAGCTG---------GGTTCTCCTCCG-TTAGTCTCTCTGGTAGCATAGATCAGG-TTCTCAGTTGGCA-TTGGTGCCTTTTTAATTTGGCAAGCCTAAATTCACTATCATTTATCAAGTGT-CTGTTAAGTCAGTGTCAGAGAGGACTATACAAGGATATGGATATGAGGAGACTTAATACATTTAGGGTTCTTTGATATAGCAGGCTATCCAGTTACATTTCCTGTTCTAAACATTTTTTCAGATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 27034 276 + 36344 agtgacatcactcaaatatctggcagttcattggtgctatcagctg---------ggttctcCTCCACTTAGTCTCTCTGGTAGAGTAGATCAGG-TTCTCATTTGGCA-TTGGTGCCATTTTAATTTGGCAAGCCTAAATTTACTATCATTTATCAAGTGT-CTATTAAGTCAGTGTCAGAGAGGGCTATATAAGGATATGGCTATGAGGAGACTTAATAAATCGAGGGTTCTTTGATATAACAGGCTACCCAGTTACATTTCTTGTTCTAAAGATTTTTTCAGATA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42534640 275 + 85365473 agtgacatcactcaaatgtctggcagttcactggtgctatcggctg---------ggttctcCTCCA-TTAGTCTCTCTGGTAGCGTAGATCAGG-TTCTCAGTTGGCA-CCGGTGCCTTTTTAATTTGGCAAGCTTAAATTCACTATCATTTATCAAGTGC-CTGTTAAGTTAGTGTCAGAGAGGACTATACAAGGATATGGATATGAGGAGACTTAATACATCTAGGGTTCTTTGATATAACAGGCTACCCAGTTACATTTCTTGTTCTAAACATTTTTTCAAATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145379569 270 - 190429646 AGTGACATCACTCAAATGTCTGGCAGTTCACAGGTGCTGTCAGCTG---------GGTTCTCCTCCA-TTAGTCTCTCTGGTAGTGTAGATCAGG-TTCTCACTTGGCA-TTGGTGCCATTTTAATTTGGCAAGCCTAAATTCACTATCATTTATCAAGTGT-CTATTAagtcagtgtcagagaggactacacaagcatatggacatgaggagacttaatacatcgagggttctt-----taacaggctaccCAGTTATATTTCCTGTTCTAAACATTTTTTCAGATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144405013 270 - 189454096 AGTGACATCACTCAAATGTCTGGCAGTTCACGGGTGCTATCAGCTG---------GGTTCTCCTCCA-TTAGTCTCTCTGGTAGTGTAGATCAGG-TTCTCACTTGGCA-TTGGTGCCATTTTAATTTGGCAAGCCTAAATTCACTATCATTTATCAAGTGT-GTATTAagtcagtgtcagagaggactacacaagcatatggacatgaggagacttaatacatcgagggttctt-----taacaggctaccCAGTTATATTTCCTGTTCTAAACATTTTTTCAGATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3518345 270 + 39453387 agagacatcactcaaatgcctggcagttcacgggtgctatcagctg---------ggttctcCTCCA-TTAGTCTCTCTGGTAGTGTAGATCAGG-TTCTCACTTGGCA-TTGGTGCCATTTTAATTTGGCAAGCCTAAATTCACTATCATTTATCAAGTGT-CTATTAagtcagtgtcagagaggactacacaagcatatggacatgaggagacttaatacatcgagggttctt-----taacaggctaccCAGTTATATTTCCTGTTCTAAACATTTTTTCAGATA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1140795 263 + 25348628 AGTGACATCACTCAAATGTCTGGCAGTTCACGGGTGCTATCAGCTG---------GGTTATCCCCCA-TTAGTCTCTCTGGTAGTGTAGATCAGG-TTCTCAC--------TGGTGCCATTTTAATTTGGCAAGCCTAAATTCACTATCGTTTATCAAGTGT-CTATTAAGTCAGTGTCAGAGAGGACTACACAAGCATATGGACATGAGGAGACTTAAAACATCGAGGGTTCTT-----TAACAGGCTACCCAGTTATATTTCCTGTTCTAAACATTTTTTCAGATA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5151097 270 + 48547382 agtgacatcactcaaatgtctggcagttcatgggtgctatcagctg---------ggttctcCTCCG-TTAGTCTCTCTGGTAGTGTAGATCAGG-TTCTCACTTGGCA-TTGGTGCCATTTTAATTTGGCAAGCCTAAATTCACTATCGTTTATCAAGTGT-CTATTAAGTCAGTGTCAGAGAGGACTACAGAAGCATATGGATATGAGGAGACTTAATACATCGAGGGTTCTT-----TAACAGGCTACCCAGTTACATTTCCCGTTCTAAACATTTTTTCAGATA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 54258 270 + 130402 AGTGACATCACTCAAATGTCTGGCAGTTCACGGGTGCTATCAGCTG---------GGTTCTCCTCCA-TTAGTCTCTCTGGTAGTGTAGATCACG-TTCTCACTCGGCA-TTGGTGCCATTTTAATTTGGCAAGCCTAAATTCACTATCATTTATCAAGTGT-CTATTAagtcagtgtcagagaggactacacaagcatatggacatgaggagacttaatacatcgagggttctt-----taacaggctaccCAGTTATATTTCCTGTTCTAAACATTTTTTCAGATA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4192646 270 + 12320365 AGTGACATCACTCAAATGTCTGGCAGTTCACTGGTGCTATCATCTG---------GGTTCTCCTCCA-TTAGTCTCTCTGGTAGTGTAGATTAGG-TTCTCACTTGGCA-TTGGTACCATTTTAATTTGGCAAGCCTAAATTCACTAGCATTTATCAAGTGT-CTATTAAGTCAGTGTCAGAGAGAACTACACAAGCATATGGATATGAAGAGACTTAATACATCGAAGGTTCTT-----TAACAGGCTACCCAGTTACATTTCCTGTTCTAAACATTTTTTCAGATA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145653984 270 + 190850796 AGTGACATCGCTCAAATGTCTGGCGGTTCTCTTTTGCTATCAGCTC---------AGTTCTCCTCCACTTAGTCTCTCCGTTAGAGTAGATCAGA-TTCTCAATTGGCA-TTGGTGCCAATTTAATTTGGCAAGCCTAAATTCACTC----TTAGAAAGTGT-CTATTAAGTCTGTGTCAGGGAGGACTATGCAAGGATATGGATATGAGAATACTTAATACATTGAGGGTTTTT-AATATAACAGGCTGCCCAGTTACATTTCCTGTTCTAAACG-TTTTTCAGATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14564846 271 + 15139346 AGTGACATCGCTCAAATGTCTGGCAGTTTGCTGGTGCTAACAGCTT---------GGTTCTCCCCCACTTATTCTCTGTGGTAGAGTAGATCAGA-TTCTCAACTGGCATTTGGTGCCATTTTAATTTGGCAAGCCTAAATTCACTA----TTAGAAAGTGT-CTATTAAGTCAGTGTCAGGGAGGACTATATAAGGATATGGATATGAGAATACTTAATACATTGAGGGTTTTT-ACTATAACAGGCTGCCCAGTTACATTTCCTGTTGTAAACA-TTTTTCAGATA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 390768 271 + 3802414 AGTGACATCGCTCAAATGTCTGGCAGTTCACTGGTGCTATCAGCTC---------GGTTCTCCTCCACTTAGTCTCTCTGGTTGAGTAGATCAGA-TTCTCAATTGGCA-TTGGTGCCATTTTAATTTGGCAGGCCTAAATTTACTA----TTAGAAAGTAT-CTATTAAGTCAGTGTCAGGGAGGACTATACAAGGATATGGATATGAGAATACTTAATCCATTGAGGGTTTTTAAATATAACAGGCTGCCCAGCTGTATTTCTTGTTCTAAGCC-TTTTTCAGATA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9750181 270 + 11631747 AGTGACATCACTCAAATGTCTGGCAGTTTGCTGGTGCTATCAGCTC---------GGTTCTCCTCCACTTAGTCTCTCTGGTAGAGTAGATCAGA-TTCTCAATTGGCA-TTGGTGTCATTTTAATTTGGCAAGCCTAAATTCACTA----TTAGAAAGTGT-CTATTAAGTCAGTGTCAGGGAGGACTATACAAGGATATGGATATGAGAATACTTAATACATTGAGGGTTTTT-AACATAACAGGCTGCCCAGTTacatttcctgttctaaaca-tttttcagata i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 110685 278 + 255898 AGTGACATCACT---------AGCAGTTCATTGATGCTATTGGCTGGGAAGCCTTGGTTCTTTTTCACATGGCCTCTTTAGTAGTATAAACCAGGTTTCTTACATGACA-ATAGCGTCATTTAGATTGGGCAAACGCTAACTTCCTATCAGTTGTCAAGTTTCCTGTagagtttatgtgggagaggaaaataggagggtatggttttcaggatgcttagttcattagggtgtctttaatgtaacggtctaccCAATTACCTTTTATGCTTTCCACATTTCTTCCAAAA i dasNov3.JH575793 I 451 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698050 556 - 63241923 I a score=1467480.000000 s hg38.chr9_KI270719v1_random 134063 140 + 176845 CAACAAACAAT-ATTTTACAATTTAACTTGTAGATGAATGAGTTTCCTGGGATATAATTTAACTAAGC-AAACTCTTTCA-TACTAAAAATCTTATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATATGAGAGGTATTC- s panTro5.chr4 86964686 141 + 194502333 CAACAAACAATCATTTTACAATTTAACTTGTAGATGAATGAGTTTCCTGGGATATAATTTAACTAAAC-AAAGTCTTTCA-TCCTAAAAATTTTATGACCTCTTTATCCATCTTAGGTTTTAAGACTGATATAAGAGGTATTC- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87741036 141 + 195804263 CAACAAACAATCATTTTACAATTTAACTTGTAGATGAATGAGTTTCCTGGGATATAATTTAACTAAAC-AAAGTCTTTCA-TCCTAAAAATTTTATGACCTCTTTATCCATCTTAGGTTTTAAGACTGATATAAGAGGTATTC- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 27310 140 + 36344 CAACAAACAAT-ATTTTACAATTTAACTTGTAGATGAATGAGTTTCCTGGGATATAATTTAACTAAGC-AAACTCTTTCA-TACTAAAAATCTTATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATATGAGAGGTATTC- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42534915 141 + 85365473 CAACAAACAATCATTTTACGGTTTAACTTGTAGATGAATGAGTTTCCTGGGATATAATTTAGCTAAGC-AAAGTCTTTCA-TACTAAAAATTTTATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATAAAAGAGGCATTC- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145379839 141 - 190429646 TAACAAACAATCATTTTACAATTTAACTTGTAGATGAACGAATTTCCTGGGATATAATTTAACTAAGC-AAAGTTTTTCA-TACTAAAAATTTTATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATATAAGAGGTATTC- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144405283 141 - 189454096 TAGCAAACAATCATTTTACAATTTAACTTGTAGATGAACAAATTTCCTGGGATATAATTTAACTAAGC-AAAGTTTTTCA-TACTAAAAATGTTATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATATAAGAGGTATTC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3518615 141 + 39453387 TAACAAACAATCATTTTACAATTTAACTTGTAGATGAACGAATTTCCTGGGATATAATTTAACTAAGC-AAAGTTTTTCA-TACTAAAAATTTTATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATATAAGAGGTATTC- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1141058 141 + 25348628 TAACAAACAATCATTTTACAATTTAATTTGTAGATGAACGAGTTTCCTGGGATATAATTTAACTAAGC-AAAGTTTTTCA-TACTAAAAATTTTATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATATAAGAGGTATTC- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5151367 141 + 48547382 TAACAAACAATCATTTTACAATTTAACTTGTAGATGAATGAGTTTCCTGGGATATAATTTAACTAAGC-AAAGTTTTTCA-TACTAAAAATTTTATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATATAAGAGGTATTC- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 54528 140 + 130402 TAACAAACAATCATTTTACAATTTAACTTGTAGATGAACGAGTTTCCTGGGATATAATTTAACTAAGC-AAAGTTTTTCA-TACTAAAAATTTTATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATATAAGA-GTATTC- i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4192916 141 + 12320365 TAACAAACAATCATTTTACAATTTAACTTGTAGATGAATGAGTTTCCTGGGATATAATTTAACTAAGA-AAAGTTTTTCA-TACTAAAAATTTCATGACCTCTTTACCCATCTTAGGTTTTAAGATTGATATAAGAGGTATTC- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145654254 140 + 190850796 TAACTAACGATCGTTTTAAAATTTAACTTGTAGATAAATGAGTTTTCTGGGATATAATAGAACTCAGC-AAAGTCTTTCA-TACT-AAAATCTTATGATGTCTTTACCTATCTTGGGTTTCAAGAGTGATATGAGAGATATTC- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14565117 140 + 15139346 TAACTAACAATCATTTTACAGTTTAACTTGTAGATAAATGAGTTTCCTGGGACATAATGTAACTAAGC-AAAGTCTTTCA-TACT-AAAATATTATGATGTCTTTACCTATCTTGGGTTTCAAGAGTGATATGAGAGGTATTC- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 391039 140 + 3802414 TAACTAACAATCATTTTACAATTTAACTTGTAGATAAATGAGTTTCCTGGCATATAATGTGACTAAGC-AAAGTCTTTCA-TACT-AAAATATTATGATGTCTTTACCTATCTTGGGTTTCAAGAGTGATACGAGAGGTATTC- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9750451 140 + 11631747 taactaacaatcattttacaatttaacttgtagataaatgagtttcctgggatataatgtaactaagc-aaagtctttca-tact-aaaatcttatgatgtctttacctatcttgggtttcaaGAGTGATATGAGAGGTATTC- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21698606 136 - 63241923 CAATAGACATGTATTTTACAATTCCATTTGGAAATTAACCAGATTTCTAAAGTATA------CTGGGC-ACAACTTTTCAGTACTAAAAATCCCAGTGTCTCTCCAACCATCTTGGGTCTCAAGATTAATTTGAGAGGTATTG- i canFam3.chr13 I 556 I 1 s dasNov3.JH575793 110963 123 + 255898 TAACTGACAGCCACTTTACAATTTCA----------------TTTCCTTG--TATAATTAAGATAGGCAAAAGTATTGAA-TACT--ATGTCTCATAATTTCTTTACCCATTTTGAGTTTCATTAGTGAATCAAGAGGCATTGT i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I a score=355673.000000 s hg38.chr9_KI270719v1_random 134203 39 + 176845 TGGAATAGAAATCCAAATT--TAAGGCTAGAGTCAAGAGTG s panTro5.chr4 86964827 39 + 194502333 TGGAATAGAAATCTAAAGT--TAAGACTAGAGCCAAGAGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87741177 39 + 195804263 TGGAATAGAAATCTAAAGT--TAAGACTAGAGCCAAGAGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 27450 39 + 36344 TGGAATAGAAATCCAAATT--TAAGGCTAGAGTCAAGAGTG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535056 39 + 85365473 TGGAATAGAAATCTAAAGT--TAAGACTAGAGCCAAGAGTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145379980 39 - 190429646 AGTAATAGAAATTTAAAGT--TAAGACTAGAGCCAAGACTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144405424 39 - 189454096 AGTAATAGAAATTTAAAGT--TAAGACTAGAGCCAAGACTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3518756 39 + 39453387 TGTAATAGAAATTTAAAGT--TAAGACTAGAGCCAAGACTG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1141199 39 + 25348628 TGTAATAGAAATTTAAAGT--TAAGACTAGAGCCAAGACTG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5151508 39 + 48547382 TGGAATAGAAATCTAAAGC--TAAGACTAGAGCCAAGACTG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 54668 39 + 130402 TGTAATAGAAATTTAAAGT--TAAGACTAGAGCCAAGACTG i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193057 39 + 12320365 TGGAATAGAAATCTAAAGT--TAAGACTAGAGCCAAGACTG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145654394 39 + 190850796 TGGAATAGAAATCTAAAAT--TAAGACTAGAGCCATGAATG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107603v1 391179 39 + 3802414 CGGAATAGAAATCTAAAAT--GAAGACTAGAGCCAAGAATG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9750591 39 + 11631747 TGGAATAGAAATCTAAAAT--TAAGACTAGAGTCAAGAATG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21698743 41 - 63241923 AGAGATGGAAATCTAAAATTATAAGTATAAATTTAAGTGTG i canFam3.chr13 I 1 C 0 s dasNov3.JH575793 111086 39 + 255898 TGGCTTGGAAATAGAAATA--TAAGAGTAGAGCCAAAGCTG i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e saiBol1.JH378162 14565257 0 + 15139346 C a score=1125125.000000 s hg38.chr9_KI270719v1_random 134242 122 + 176845 CTGAAGATAAGACTCTTATCTAAAGGAAAATCAAGCAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACAGAGGGGAGAGAATGCAATTGCCCCAAATAA---AGACTCACTTTGGAACTCAGT s panTro5.chr4 86964866 121 + 194502333 C-AAAGATAAGGCTTTTATCCAAAGGAAAATCAAGCAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACACAGGGGAGAGAATACAATTGCCCCAAATAA---AGACTACTTTTGGAACTCAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87741216 121 + 195804263 C-AAAGATAAGGCTTTTATCCAAAGGAAAATCAAGCAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACACAGGGGAGAGAATACAATTGCCCCAAATAA---AGACTACTTTTGGAACTCAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 27489 122 + 36344 CCGAAGATAAGACTCTTATCCAAAGGAAAATCAAGCAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACAGAGGGGAGAGAATACAATTGCCCCAAATAA---AGACTCACTTTGGAACTCAGT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535095 122 + 85365473 CCAAAGATAAGGCTTTTATCTAAAGGAAAATCAAGCAATTGCTGTGTCTTGAAAAGGCCAGTGAGCAGACACAGGGGAGAGAGTACAACTGCCCCAAATAA---AGACTACTTTTGGAACTCAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145380019 122 - 190429646 CTGAAGATAAGGCTCTTATCCAAAGGAAAATCAAGAAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACACAGGGGAGAGAATACAATTGCCCCAAATAA---AGACTACTTTTGGAACTCAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144405463 122 - 189454096 CTGAAGATAAGGCTCTTATCCAAAGGAAAATCAAGAAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACACAGGGGAGAGAATACAATTGCCCCAAATAA---AGACTACTGTTGGAACTCAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3518795 122 + 39453387 CTGAAGATAAGGCTCTTATCCAAAGGAAAATCAAGAAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACACAGGGGAGAGAATACAATTGCCCCAAATAA---AGACTACTTTTGGAACTCAAT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1141238 122 + 25348628 CTGAAGATAAGGCTCTTATCCAAAGGAAAATCAAGAAATTGCTATGTCTTGCAAAGGCCAGTGAGCAAACACAGGGGAGAGAATACAATTGCCCCAAATAA---ACACTACTTTTGGAACTCAGT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5151547 122 + 48547382 CTGAAGATAAGGCTCTTATCCAAAGGAAAATCAAGCAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACACAGGGGAGAGAATACAATTGCCCCAAATAA---CGACTACTTTTGGAACTCAGT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 54707 122 + 130402 CTGAAGATAAGACTCTTATCCAAAGGAAAATCAAGAAATTGCTATGTCTTGCAAAGGCCAGTGAGCAAACACAGGGGAGAGAATACAATTGCCCCAAATAA---AGACTACTTTTGGAACTCAGT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193096 122 + 12320365 CCAAAGATAAGGCTCTTATCCAAAGGAAAATCAAGCAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACACAGGGGAGAGAATACAATTGCCCCAAATAA---AGACTACTTTTGGAATTCAGT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145654433 121 + 190850796 CCAAAGATAAGGTTCTTATCCAAAGGAAAAGCAAGAAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACACA-GGGGGAGAATACAATTGCTCCAAATAA---AGACCACCTTTGGAACTCAGT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107603v1 391218 121 + 3802414 CCAAAGATAAGGCTCTTATACAAAGGAAAAGCAAGCAATTGCTATGTCTTGCAAAGGCCAGTGAGGAGACACA-GGGAGAGAATACAATTGCCCCAAATAA---AGACCACCTTTGGAACTCAGT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9750630 121 + 11631747 CCAAAGATAAGGCTCCTATCCAAAGGAAAAGCAAGCAATTGCTATGTCTTGCAAAGGCCAGTGAGCAGACACA-GGGAGAGAATACAATTGCCCCAAATAA---AGACCACCTTTGGAACTCAGT i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 111125 110 + 255898 CCATAAATAAACATCTGATATAGAAGAAAATCAAGCAAGGGCTGCATCTTGCAAAGACCATTGAGCAGGCCCA--------------TTAGCTCCAAATACATTAGAC-ACTTTTGGAACCTAGT i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698784 0 - 63241923 C e saiBol1.JH378162 14565257 0 + 15139346 C a score=178664.000000 s hg38.chr9_KI270719v1_random 134364 52 + 176845 GATTATGTGTGTGCatatatgtgtatatatgtatattatacatgtgtatgca s panTro5.chr4 86964987 34 + 194502333 GATtatatatgtgtatatat------atatgcatattata------------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 87741337 34 + 195804263 GATtatatatgtgtatatat------atatgcatattata------------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 27611 40 + 36344 GATtatatgtgtgcatatatgtgtatatatatgtatatta------------ i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535217 40 + 85365473 GATtatatatgtgtatatatatatatatatatgcatatta------------ i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145380141 34 - 190429646 GATtatatatgtgtgtatat------atatgcatattaca------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144405585 34 - 189454096 GATtatatatgtgtgtatat------atatgcatattaca------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3518917 34 + 39453387 GATtatatatgtgtgtatat------atatgcatattaca------------ i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1141360 34 + 25348628 GATtatatatgtgtgtatat------atatgcatattaca------------ i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5151669 34 + 48547382 GATtatatatgtgtgtatat------gtatgcatattaca------------ i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 54829 34 + 130402 GATtatatatgtgtgtatat------atatgcatattaca------------ i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193218 34 + 12320365 GATtatatatgtgtgtatat------atatgcatattaca------------ i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145654554 20 + 190850796 GATtatgtatgtgtatatat-------------------------------- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107603v1 391339 23 + 3802414 GATTATGtatgtatatgtat------gca----------------------- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9750751 25 + 11631747 GATtatgtatgtatacatat------gtatg--------------------- i aotNan1.NW_018493494v1 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e dasNov3.JH575793 111235 0 + 255898 C e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698784 0 - 63241923 C e saiBol1.JH378162 14565257 0 + 15139346 C a score=332127.000000 s hg38.chr9_KI270719v1_random 134416 73 + 176845 --------tgtatatat-gtatattatacatatatatgcatgtatatatatga----------atatatata----AAACTGAAAACTGCACACAT s panTro5.chr4 86965021 58 + 194502333 ----------tatatat-gtgt---------------gcatgtatatatatga----------atatatata--GAAAACTGAAAACTGAACACAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87741371 58 + 195804263 ----------tatatat-gtat---------------gcatgtatatatatga----------atatatata--GAAAACTGAAAACTGAACACAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 27651 56 + 36344 ----------tacatgt-gtat---------------gcatgtatatatatga----------atatatata----AAACTGAAAACTGCACACAT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535257 60 + 85365473 ----------tatatat-gtat---------------gcatgtatatatatga----------atatatatataGAAAACTGAAAACTGAACACAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145380175 54 - 190429646 ----------tatatat-gtat---------------acacgtatttatatga------------atatata----taACTGAAAACTGAacacat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144405619 54 - 189454096 ----------tatatat-gtat---------------acacgtatttatatga------------atatata----taACTGAAAACTGAacacat i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3518951 54 + 39453387 ----------tatatat-gtat---------------acatgtatttatatga------------atatata----taACTGAAAACTGAACAAAT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1141394 56 + 25348628 ----------tatatat-gtat---------------acatgtatttatatga----------atatatata----taactgaaaactgaacacat i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5151703 56 + 48547382 ----------tatatat-gtat---------------acatgtatttatatga----------atgtatata----taACTGAAAACTGAACACAT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 54863 51 + 130402 ----------tatatat-gtat---------------acatgtatttatatga----------atatatata----taactgaa-----aacacaa i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193252 36 + 12320365 ----------tatatgt-at---------------------------------------------atatgta----tacatgaaaactgaacacat i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145654574 60 + 190850796 atgtatat--tatatat-acat-----------------atgcatatgtatga------------atatata----AAACTGAAAACTGAACACAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14565257 70 + 15139346 ---TGTAT--tatatataatat-----------------atgcatatatatgaatatatatatatatatata----taACTGAAAACTGAACACAT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 391362 59 + 3802414 -----tat--tatacat-acat-----------------atgcatatatatga--------atatatatgta----AAACTGAAAACTGAATACAT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9750776 55 + 11631747 -------t--tatatat-acat-----------------atgcatatatatga----------atatatgta----AAACTGAAAACTGAACACAT i aotNan1.NW_018493494v1 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e dasNov3.JH575793 111235 0 + 255898 C e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698784 0 - 63241923 C a score=111701.000000 s hg38.chr9_KI270719v1_random 134489 13 + 176845 CCCATATACACca s panTro5.chr4 86965079 13 + 194502333 CCCATATACACCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87741429 13 + 195804263 CCCATATACACCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 27707 13 + 36344 CCCATATACACca i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535317 13 + 85365473 CCCATATACACCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145380229 13 - 190429646 cccacatacacca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144405673 13 - 189454096 cccacatacacca i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3519005 13 + 39453387 CCcacatacacca i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1141450 13 + 25348628 cccacatacaccg i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5151759 13 + 48547382 CCCATATACACCA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 54914 13 + 130402 cccacatacacca i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193288 13 + 12320365 cccatatacagca i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145654634 12 + 190850796 -CCATATACACTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14565327 12 + 15139346 -CCATATACACTG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 391421 12 + 3802414 -CCATATACACTA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9750831 12 + 11631747 -CCATCTACACTA i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 111235 4 + 255898 CTCA--------- i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I e canFam3.chr13 21698784 0 - 63241923 C a score=4683120.000000 s hg38.chr9_KI270719v1_random 134502 455 + 176845 tatacatgaaagt-----gaacacacacacatacataaac--ata----------TATATTCAGTTTCAAACAATTGTTAGGGAACCTGAGGAAGAAACTAAATGGAATATAAT----------------------------GGTTGCATCTATGATAGCCATGGTACTAGAACTAGTAGTAGTTCTACTAAGGTGAGAATTGACATAGTAAAAGAAATAAGATACAAAGCAGTAAGAGAGAGCTACATTTTCCTTAAGGCCAGGCTGAATATTCACTAACAAGGAAATTTCTACAGTCATTATTTTAATCTGATTCATTCTCTTGGTGGGATATTCCAGAGTTACCA-CCTACAGAAAttccacttttccttactgaggttttc----ttttttttcttttcagtccaaatattagtcattttggtagagaaggtagaaacaattaacaattgagtaattcCTCAA-GAATCATGT-TAAAAGGTTTCCAAATCATGAATGTATAG s panTro5.chr4 86965092 459 + 194502333 TATACATGAAAGT-----GAacacacacacacacacacac--aca------cacaTATATTCAGTTTCAAAGAATTGTTATGGAACCTGAGGAAGAAACTAAATGGAATATGAT----------------------------GGTCACATCTATGACAGCCATGGTACTAGAACTAGCAGCAGTTCCTCTAAGGTGAGAATTGACATAGTAAAAGAAATAAGAAACAAAGCAGCAAGAGAGAGGCACATTTTCCCTAAAGCCAGGCTGAATATGTGCTAACAAGGAAATTTCTGCTGTCATTATGTTAATCTGACTCACTCTCTCTGTGGGATGTTCCAGAGTTACTA-CCTACAGAAAttccactttcccttactgaggttttc----ttttttttattttcagtccaaatattagtcattttggtagataaggcagaaacaattaacaattgaataattctTCAA-GAATCTTGT-TAAAAGGTTTCCAAATCATGAATGTATAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87741442 458 + 195804263 TATACATGAAAGT-----GAacacacacacacacacacac--aca------cacaTATATACAGTTTCAAAGAATTGTTATGGAACCTGAGGAAGAAACTAAATGGAATATGAT----------------------------GGTCACATCTATGACAGCCATGGTACTAGAACTAGTAGCAGttcctctaaggtgagaattgacatagtaaaagaaataagaaacaaagcagcaagagagaggcacattttccctaaagccaggctgaatatgtgctaacaaggaaatttctgctgtcattattttaatctgactcactctctcTGTGGGATGTTCCAGAGTTACTA-CCTACAGAAAttccactttcccttactgaggttttc-----tttttttattttcagtccaaatattagtcattttggtagataaggcagaaacaattaacaattgaataattctTCAA-GAATCTTGT-TAAAAGGTTTCCAAATCATGAATGTATAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 27720 454 + 36344 tatacatgaaagt-----gaacacacacacatacataaac--ata----------TATATTCAGTTTCAAACAATTGTTAGGGAACCTGAGGAAGAAACTAAATGGAATATAAT----------------------------GGTTGCATCTATGATAGCCATGGTACTAGAACTAGTAGTAGTTCTACTAAGGTGAGAATTGACATAGTAAAAGAAATAAGATACAAAGCAGTAAGAGAGAGCTACATTTTCCTTAAGGCCAGGCTGAATATTCACTAACAAGGAAATTTCTACAGTCATTATTTTAATCTGATTCATTCTGTTGGTGGGATATTCCAGAGTTACCA-CCTACAGAAAttccacttttccttaccgaggttttc-----tttttttcttttcagtccaaatattagtcattttggtagagaaggtagaaacaattaacaattgagtaattcCTCAA-GAATCATGT-TAAAAGGTTTTCAAATCATGAATGTATAG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535330 439 + 85365473 TATACATGAAAGT-----GAacacacacacacacacacac--acacacacacacaTATATTCAGTTTCAAAGAATTGTTATGGAACCTGAGGAGGAAACTAAATGGAATATGAT----------------------------GGTTGCATCTATGACAGCCATGGTACTAGAACTAGTAGTAGTTCTTCTAAGGTGAGAATTGACATAGTAAAAGAAATAAGAAACAAAGCAGCAAGAGAGAGGTATATTTTCCCTAAGGACAGGCTGAATATTTGTTAACAAGGAAATTTCTACAGTCATTATTTTAATCTGACTCACTCTCTCTGTGGGATATTCCAGAGTTACTA-CCTACAGAAATTCCACTTTCCCTTACTGAGGTTTTC---TTTTTTTTTATTTTCAGTCCAAATATTAGTCATTTTGGTAGATAAGGCAGAAAC--------------TAAT--------------TGT-TAAAAGGTTTCCAAATCATGAATGTATAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145380242 460 - 190429646 tatacatgaaagt-----gaacacacacacacacatacacatata------tatatatattcaATTTCATTGAATTGTTATGGAACCTAAGGAACAAACTAAATGGAATATGAT----------------------------GGTCGCATCTGTGACAGCCATGGTACTAGAACTAGTAGTCGTTCTTCTAAGGTGAGAATTGACATAGTAAAACAAATAAGAAACAAAGCAGCAAGAGAGAGGTACATTTTCCCTGAAGCCAGGCTGAATATTCGCTAACAAGGAAATTTCTACAGTCATTGTTTTAATCTGATTCACTCTCTCTGTGGGATGTTCTGGGGTTACTG-CCTACAGAAAttccactttcccttatcgaggttttc-----tttttttattttcagtccaaatattaatcattttggtagagaaggcagaagcaattaacaactgagtaattctTCAA-CAATCATGT-TAAAAGGTTTCCAAATCATGAATGTATAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144405686 459 - 189454096 tatacatgaaagt-----gaacacacacacacacatacac--ata------tatataTATTCAATTTCATTGAATTGTTATGGAACCTAAGGAACAAACTAAATGGAATATGAT----------------------------GGTCGCATCTGTGACAGCCATGGTACTAGAACTAGTAGTCGTTCTTCTAAGGTGAGAATTGACATAGTAAAACAAATAAGAAACAAAGCAGCAAGAGAGAGGTACATTTTCCCTGAAGCCAGGCTGAATATTCGCTAACAAGGAAATTTCTACAGTCATTGTTTTAATCTGATTCACTCTCTCTGTGGGATGTTCTGGGGTTACTG-CCTACAGAAAttccactttcccttatcgaggttttc----ttttttttattttcagtccaaatattaatcattttggtagagaaggcagaagcaattaacaactgagtaattctTCAA-CAATCATGT-CAAAAGGTTTCCAAATCATGAATGTATAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3519018 452 + 39453387 tatacatgaaagt-----ga--acacacacacacatacac--ata------tatataTATTCAATTTTATTGAATTGTTATGGAACCTAAGG----AACTAAATGGAATATGAT----------------------------GGTCGCATCTGTGACAGCCATGGTACTAGAACTAGTAGTCGTTCTTCTAAGGTGAGAATTGACATAGTAAAACAAATAAGAAACAAAGCAGCAAGAGAGAGGTACATTTTCCCTGAAGCCAGGCTGAATATTCGCTAACAAGGAAATTTCTACAGTCATTGTTTTAATCTGATTCACTCTCTCTGTGGGATGTTCTGGGGTTACTG-CCTACAGAAAttccactttcccttatcgaggttttc-----tttttttattttcagtccaaatattaatcattttggtagagaaggcagaagcaattaacaactgagtaattctTCAA-CAATCATGT-TAAAAGGTTTCCAAATCATGAATGTATAG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1141463 456 + 25348628 tatacatgaaagt-----gaacacacacacacacatacac----a------tatatatattcaATTTCATTGAATTGTTATGGAACCTAAGGAACAAACTAAATGGAATATGAT----------------------------GGTCGCATCTGTGACAGCCATGGTACTAGAACGAGTAGTCATTCTTCTAAGGTGAGAATTGACATAGTAAAACAAATAAGAAACAAAGCAGCAAGAGAGAGGTACATTTTCCCTGAAGCCAGGCTGAATATTCGCTAACAAGGAAATTTCTACAGTCATTATTTTAATCTAATTCATTCTCTCTGTGGGATGTTCTGGGGTTACTG-CCTACAGAAAttctactttcccttatcgagggtttc-----tttttttattttcagtccaaatattaatcattttggtagagaaggcagaagcaattaacaactgagtaattctTCAA-CAATCATGT-TAAAAGGTTTCCAAATCATGAATGTATAG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5151772 453 + 48547382 TCTACATGAAAGT-----GAacacacacacacac------------------acaTATATTCAGTTTCATTGAATTGTTATGGAACCTAAGGAACAAACTAAATGGAATATGAT----------------------------GGTCGCATCTGTGACAGCCATGGTATTAGAACTAGTAGCAGTTCTTCTAAGGTGAGAAATGACATAGTAAAACAAATAAGAAACAAAGCAGCAAGAGAGAGGTACATTTTCCCTGAAGCCAGGCTGAATATTCACTGACAAGGAAATTTCTACAGTCATTATTTTAATCTGATTCACTCTCTCTGTGGGATGTTCTGGGGTTACTG-CCTACAGAAATTCCACTTTCCTTTATCGAGGTTTTCTttttttttttttttttccgtccaaatattagtcattttggtagagaaggcagaagcaattaacaattgagtaattctTCAA-GAATCATGT-TAAAAGGTTTCCAAATCATGAATGTATAG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 54927 456 + 130402 tatacatgaaaat-----gaacacacacacacacatacac----a------tatatatattcaATTTCATTGAATTGTTATGGAACCTAAGGAACAAACTAAATGGAATATGAT----------------------------GGTCGCATCTGTGACAGCCATGGTACTAGAACTAGTAGTCGTTCTTCTAAGGTGAGAATTGACATAGTAAAACAAATAAGAAACAAAGCAGCAAGAGAGAGGTACATTTTCCCTGAAGCCAGGCTGAATATTCGCTAACAAGGAAATTTCTACAGTCATTATTTTAATCTGATTCATTCTCTCTGTGGGATGTTCTGGGGTTACTG-CCTACAGAAAttccactttcccttatcgaggttttc-----tttttttattttcagtccaaatattaatcattttggtagagaaggcagaagcaattaacaactgagtaattctTCAA-CAATCATGT-TAAAAGGTTTCCAAATCATGAATGTATAG i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193301 458 + 12320365 tatacatgaaagt-----gaacacacacacacatacacac--aca------tatatatattcaGTTTCACTGAATTGCTATGGAACCTAAGGAACAAACTAAATGGAATATGAT----------------------------GGTCACATCTGTGACAGCCATGGTGCTAGAACTAGTAGTAGTTCTTCTAAGGTGAGAATTGACATAGTAAATCAAATAAGAAACAAAGCAGCAAAAGAGAGGTACATTTTCCCTAAAGCCAGGCTGAATATTCGCTAACAAGGAAATTTCTACAGTCATTATTTTAATCTGATTCACTCTCTCTATGGGTTGTTCCAGGGTTACTG-CCTACAGAAAttccactttcccttactgaggttttc-----tttttttatttccagtccaaatattggtcattttggtagagaaggtagaagcaattaacagttgattaattctTCAA-GAATCATGT-TAAAAGGTTTCCAAATCATGAAGGTATAG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145654646 439 + 190850796 TATACATGAAAGT-----GAACACAC----------------TCA------CACATAGATTCAGTATCAAAGAATTACTATGGACCCTAAGGAAGAAACTAAATGGAATATGAT----------------------------GGTAGCATCTATGACAGCCATGGTACTAGAACTAGTGGTAGTCCTACTAAGGTGAGAATTAACATAGTAAAAGAAATAA---ACAACCTAGCAAGAGAGAGATATATTTTCCCTAAGGCCAGGCTGAATATTCACTAACAAGGAAATTTCTCCAGCCATTATTTTAATCTGGTTTACTCTCTCTGTGGG-TGTTCCAGAGTTACTG-CCTACAGAaattccactttcccttacagagattttc------ttttctattttcagtccaaatgttagtcactctggtagagaaggtagaaacaattaataattgagtaattctTCAA-GAATTATGC-TAAAAGGTTTCCAAATCATGAATGTATAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14565339 441 + 15139346 TATACATGAAAGT-----GAACACAC----------------TCA------TACACAGATTCAGTATCAAAGAATTATTATGGACCCTAAGGAAGAAACTAAATAGAATATGAT----------------------------GGTAGCATCTATGACAGCCATGGTACTAGAACTAGTAGTAGTCCTACTAAGGTGAGAATTAACATAGTAAAATAAATAA---ACAAAGTATCAAGAGAGAGATACATTTTCCCTAAGGCCAGGCTGAATATTCGCTAACAAGGAAATTTCTCCAGCCACTGTTTTAATCTGATTTACTCTCTCTGTGGGATGTTCCAGAGTTACTGCCCTCCAGAAAttccactttcccttacagagattttc------ttttctatgttcagtccaaatgttagtcatttttgtagagaaggcagaaacaatgaataattgagtaattctTCAA-GAATTATTC-TAAAAAGTTTCCAAATCATGAATATATAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 391433 446 + 3802414 TATACATGAAAGTGAACAGAACACAC----------------TCA------CACATAGATTTAGTATCAAAGAATTATTATGGACCCTAAGGAAGAAACTAAATGGAATATGAT----------------------------GGTAGCATGTATGACAGCCATGGTACTAGAACTAGTAGTAGTCCTACTAAGGTGAGAATTAACATAGTAAAGGAAATAA---ACAAAGTAGCAGGAGAAGGATACATTTTCCCTAAGAACAGGCTGAATATTTGCTAACAAGGAAATTTCTCCAGCCATTATTTTAATCTGATTTACTCTCTCTGTGGGATGTTCCAGAGTTACTGCCCTCCAGAAAttccactttcccttacagagattttc------ttttctattttcagtccaaatgttagtcattttggtagagaaggcagaaacaatgaataattgagtaattctTCAA-GAATCATGC-TAAAAGGTTTCCAAATCATGAATGTATAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9750843 441 + 11631747 TATACATGAAAGT-----GAACATAC----------------TCA------CACATAGATTCAGTATCAAAGAATTATTATGGACCCTAAGGAAGAAACTAAATGGAATATGAT----------------------------GGTAGCATCTATGACAGCCATGGTGCTAGAACTAGTAGTAGTTCTACTAAGGTGAGAATTAACATAGTAAAAGAAATAA---ACAAAGTAGCAAGAGAGAGATACATTTTCCCTAAGGCCAGGCTGAATATTCGCTAACAAGGAAATTTCTCCAGCCATTATTTTAATCTGATTTACTCTCTCTGCGGGATGTTCCAGAGTTACTGCCCTCCAGAAATTTTGCtttctcttacagagattttc------ttttctattttcagtccaaatgttagtcattttggtagagaaggcagaaacaatgaataattgagtaattctTCAA-GAATCATGC-TAAAAGGTTTCCAAATCATGAATGTATAA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21698784 480 - 63241923 TATacagacagac-----agacacacagacacacacacag--aca------cacacacacaca----cacacacCTGTTAGGGAACA-GAGGAAGAGCCTAAGTGGAATATAATTGAACCAGGAAGATCAATTGTAATAGAGGGCCGCACCTAGGAGAGGGATGCT-CTTGAATGGGGAATAGTTTTACTAAAGTTGGAATTGACATCGTCAATGGAATAAGAGACAAA-CAGCAAGACAGAGATACATTTTCCCCAAGGCCAGGAGGGATATTCTCTAACAAGGAGATTCCTACAGTGATTATTTTCGTCTGATTCACTCTCCCTGTGGGGCGCTCTATAGTTATTT-CATAAAGAAAttctactttcccttaccatggttttc------tttttcattttaagtccaaatattagtctttctggcagagaaggcagaaacaattagcaactgaacaattctTCAAGGAATTGTGTAGAAAAAGCTTCCAAATCATGAATGTATAG i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 111239 441 + 255898 ----------------------------------------------------------ATTCAGTTTCAGAGAACTGTTACAGAAGAAGAGATAGGACCCAAATAGAATATAATTGGACCAGGCAGATCAATTGCAATAAATGACTGTAGCTACGAGAGGCATGCTCTAGGAACTGTTGTTAGTTATACTAAGATGGGAATTGGCATAGTCAAAGAGAGGAGAAACAAAGGAGCAATAGAGAGATACATTTTCCCCAAGGGTAAGCTGGCTCTTCTCTAACAAGGAAATTCCTGCAGTGGTTATTTTAATCTGATTCACTATCCCTGTAGGATGCACCACAGTTACTT-CCTAAAGAAGTTCCACATTCCTGTACCAAGGTTTTC------ATTTccattttcaattcaaacactagtctctttggcacagaaggcagaagttattagcaactgagcaattATTCAAAGAATTGTAT-AGAAAGGTCTCCAAATCATGAATGTATAT i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 688076 4638 + 1045278 I a score=41865.000000 s hg38.chr9_KI270719v1_random 134957 4 + 176845 TTAT s panTro5.chr4 86965551 4 + 194502333 TTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87741900 4 + 195804263 TTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 28174 4 + 36344 TTAT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535769 4 + 85365473 TTTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145380702 4 - 190429646 TTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144406145 4 - 189454096 TTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3519470 4 + 39453387 TTCT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1141919 4 + 25348628 TTCT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5152225 4 + 48547382 TTCT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 55383 4 + 130402 TTCT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193759 4 + 12320365 TTCT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145655085 4 + 190850796 TTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14565780 4 + 15139346 TTAT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 391879 4 + 3802414 TTAT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9751284 4 + 11631747 TTAT i aotNan1.NW_018493494v1 C 0 C 0 s tarSyr2.KE948818v1 692714 4 + 1045278 TTCT i tarSyr2.KE948818v1 I 4638 I 349 s canFam3.chr13 21699264 4 - 63241923 TTCT i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 111680 4 + 255898 TTAT i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I a score=1850606.000000 s hg38.chr9_KI270719v1_random 134961 213 + 176845 ATTTTGTTCGCTAGATTTTAACCCACATACCTCACTTGTAT----AGAAATTATGCTTATTTGGATACTCAGTATATTTCTTCACATAAA-GAC--AAAA----TCTATAAAATGT----ACACACACACAGATGCTATGGATACATGCACACATGTGCACACACAAATATGTATA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAGGTCAGTATTAATTAAAAC s panTro5.chr4 86965555 178 + 194502333 ATTTTGTTCACTAGATTTTAACCCACATACCTCATTTATAT----AGAAATAATGCTTATTTGGATATTCGGTAAATTTCTTCATACAAA-GAC--AAAA--AATCTATAAAATG--------CACACACAGA---------------------------------AATATATGTA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAAGTCACTATTAATTAAAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 87741904 178 + 195804263 ATTTTGTTCACTAGATTTTAACCCACATACCTCATTTATAT----AGAAATAATGCTTATTTGGATATTCGGTAAATTTCTTCATACAAA-GAC--AAAA--AATCTATAAAATG--------CACACACAGA---------------------------------AATATATGTA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAAGTCACTATTAATTAAAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 28178 212 + 36344 ATTTTGTTCACTAGATTTTAACCCACATACCTCACTTGTAT----AG-AATTATGCTTATTTGGATATTCAGTATATTTCTTCACATAAA-GAC--AAAA----TCTATAAAATGT----ACACACACACAGATGCTATGGATACATGCACACATGTGCACACACAAATATGTATA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAGGTCAGTATTAATTAAAAC i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535773 179 + 85365473 ATTTTGTTCACTAGATTTTAACCCACATACCTCATTTATAT----AGAAATGATGCTTATTTGGATATTCAGTAAATTTCTTCATACAAA-GAC--AAAA-AAATCTATAAAATG--------CACACACAGA---------------------------------AATATATGTA-----CATGGTTCACCATTATTTTCTAGATCATTCAGAGGTCACTGTTAATTAAAAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145380706 214 - 190429646 GTTTTGTTCACTAGATTTTAGCCCACATACCTCATTTGTAT----AGAAATGATGCTTATTTGGATATTCAGTAAATTTCTTCATACAAA-GAC-AAAAAAAAATCTATAAAAAGTacacacacacacacagacactatgaatacatgcacacacaca--------AATATATGTA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAGGTCACTATTAATTAAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144406149 212 - 189454096 GTTTGGTTCACTAGATTTTAGCCCACATACCTCATTTGTAT----AGAAATGATGCTTATTTGGATATTCAGTAAATTTCTTCATACAAA-GAC-AAAAAAAAATCTATAAAAAGT--acacacacacacagacactatgaatacatgcacacacaca--------AATATATGTA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAGGTCACTATTAATTAAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3519474 212 + 39453387 GTTTTGTTCACTAGATTTTAGCCCACATACCTCATTTGTAT----AGAAATGATGCTTATTTGGATATTCAGTAAATTTCTTCATACAAA-GAC-AAAAAAAAATCTATAAAAAGT--acacacacacacagacactatgaatacatgcacacacaca--------AATATATGTA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAGGTCACTATTAATTAAAAC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1141923 211 + 25348628 GTTTTGTTCACTAGATTTTAACCCACATACCTCATTTGTAT----AGAAATGATGCTTATTTGGATATTCAATAAATTTCTTCACACAAA-GAC--AAAAAAAATCTATAAAAAGT--acacacacacacagacactatgaatacatgcacacacaca--------AATATATGTA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAGGTCACTATTAATTAAAAC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5152229 210 + 48547382 ATTTTGTTCACTAGATTTTAACCCACATACCTCATTTGTAT----AGAAATGAGGCTTATTTGGATATTCAGTAAATTTCTTCATACAAA-GAC--AAAAAAAATCTACAAAAAGT--acacacacacacagacactatgaatacatgcacacacaca--------AATATATGTA-----CATGGTTTACCATTATTTTCTAGATCA-TCAGAGGTCACTATTAATTAAAAC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 55387 213 + 130402 GTTTTGTTCATTAGATTTTAACCCACATACCTCATTTGTAT----AGAAATGATGCTTATTTGGATATTCAGTAAATTTCTTCATACAAA-GACAAAAAAAAAATCTATAAAAAGT--actcacacacacagacactatgaatacatgcacacacaca--------AATATATGTA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAGGGCACTATTAATTAAAAC i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193763 211 + 12320365 ATTTTGTTCACTAGATTTTAACCCACATACCTCATTTGTAT----AGAAATGATGCTTATTTGGATATTCAGTAAATTTATTCATACAAA-GAC--AAAAAAAATCTATAAAAAGT--acacacacacacagacactgtgaatacatgcacacacaca--------AATATATGTA-----CATGGTTTACTATTATTTTCTAGATCATTCAGAGGTCACTATTAATTAAAAC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145655089 216 + 190850796 ATTTTGTTAACTAGATTTTAACCCATGTAACTCATTCGTAT----AAAAATGATGCTTATTTGAATATGCAGTAAATTTTTGCATACGAGTGAC---AAAAAAATCTATAAAATGT--GCACA---ACAGAGATGCTATGCATACTTGCACACATATGCACACACAATTATGTATA-----CATGGTTTACCATTATTTTCTAGATCATTCAAAACTCACTATTAATTAAAAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14565784 212 + 15139346 ATTTTGTTAACTAGATTTTAACTCACGTACCTCATTTGTAT----AGACATGATGCTTATTTG-----GTAGTAAATTTCTTCATATGAATGAC--AAAAAAAATCTATAAAATGT--ACACA---ACAGAGAGGCTATGGATACTTACACACATATGCACACACAAATATGTATA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAAGTCACTGTTAATTAAAAC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 391883 216 + 3802414 ATTTTGTTAACTAGATTTTAACCCACGTACCTCATTTGTAT----AGAAATGATGCTTATTTGGATATGTAGTAAATTTCTTCATATGAGTGAC---AAAAAAATCTATAAAACGT--ACACA---ACAGAGATGCTATGGATACTTGCACACATGTGCACACACAAATATGTATA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAGGTCACTATTAACTAAAAC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9751288 218 + 11631747 ATTTTGCTAACTAGATTTTAACCCATGTACCTCATTCATAT----AGAAATGATGTTTATTTGGATATGCAGTAAATTTCTTCATACGAGTGAC-AAAAAAAAATCTATAAAATAT--ACACA---ACAGAGATGCTATGGATACTTGCACATATGTGCACACACAAATATGTATA-----CATGGTTTACCATTATTTTCTAGATCATTCAGAGGTCACTATTAATTAAAAC i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21699268 172 - 63241923 GTTTTGTTCACTGGATTTTAACCCACGCAATTTATTCATAT----AAAAATA---TTTACATAGATGTTTAACAATTCTTTCTATACAGATGGC--AAGA--GATCTACCGAAAGT--ACACACACTC-------------------------------------------TTATA-----TATGACTTACCAGCATTTTCCAGATCACCCAGAGGTTACTATTAACTGTAAC i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 111684 192 + 255898 -ATTTTTTCACTATATTTTAACCCACATACATAATCTGTATTAAAAAAAAAGACATTTACTATGATATTTAACAAATCTCTCTAAACAGCTTAC--AAAA---AGCTACAAAACAC--ACACACATGTATATA---------------------------------GAGATCTATAGGGTTTAGGGTTTATCCTCCTTTTCTAGATCACCCAGAGTTCACAATTAATTAAAAT i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 692718 349 + 1045278 I a score=21936.000000 s hg38.chr9_KI270719v1_random 135174 2 + 176845 AT s panTro5.chr4 86965733 2 + 194502333 AT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87742082 2 + 195804263 AT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 28390 2 + 36344 AT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535952 2 + 85365473 AT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145380920 2 - 190429646 GT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144406361 2 - 189454096 GT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3519686 2 + 39453387 GT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1142134 2 + 25348628 AT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5152439 2 + 48547382 AT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 55600 2 + 130402 AT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193974 2 + 12320365 AT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145655305 2 + 190850796 AT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14565996 2 + 15139346 AT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 392099 2 + 3802414 AT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9751506 2 + 11631747 AT i aotNan1.NW_018493494v1 C 0 C 0 s tarSyr2.KE948818v1 693067 2 + 1045278 CT i tarSyr2.KE948818v1 I 349 I 336 s canFam3.chr13 21699440 2 - 63241923 AT i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 111876 2 + 255898 AT i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I a score=1170264.000000 s hg38.chr9_KI270719v1_random 135176 120 + 176845 CATAGATCTATGGCAAATTTTGGGCCACTTCTCCTAAGACAGG---AATTTAAAAA--------------------GCC-------TTCAATTGTCATAACAATG-----GGAAGAAGTCTGAGAGCTGGAGTAAGGGAAG-TTGGTGCTCAGAAA s panTro5.chr4 86965735 120 + 194502333 CATAGATCTGTGGCAAATTTGGGGCCACTTCTCCTAAGACAGG---AATTTTAAAA--------------------TCC-------TTCAATTGTCATAACAGTG-----AGAAGAAGTCTGAGAGCTGGAGTAAGGGAAG-TTGGTGCTCAGAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87742084 120 + 195804263 CATAGATCTGTGGCAAATTTGGGGCCACTTCTCCTAAGACAGG---AATTTTAAAA--------------------TCC-------TTCAATTGTCATAACAGTG-----AGAAGAAGTCTGAGAGCTGGAGTAAGGGAAG-TTGGTGCTCAGAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 28392 120 + 36344 CATAGATCTATGGCAAATTTTGGGCCACTTCTCCTAAGACAGG---AATTTAAAAA--------------------GCC-------TTCAATTGTCATAACAATG-----GGAAGAAGTCTGAGAGCTGGAGTAAGGGAAG-TTGGTGCTCAGAAA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42535954 120 + 85365473 CAAAGATCTATGGCAAATTTGGGGCCACTTCTCCTAAGACAGG---AATTTTAAAC--------------------TCC-------TTCAATTGTCATAGCAATG-----GGAAGAAGTCTGAGAGCTGGAGTAAGGGAAG-TTGGTGCTCAGAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145380922 120 - 190429646 CATAGATCTATGGCAAATTTGGGACCACTTCTCCTAAGATAGG---AATTTTAAAA--------------------GTC-------TTCACTTGTTATGACAATG-----GGAAGAAGTCTGAGAGCTGGAGTAAAGGAAG-TTGGTGCTCAGAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144406363 120 - 189454096 CATAGATCTATGGCAAATTTGGGACCACTTCTCCTAAGATAGG---AATTTTAAAA--------------------GTC-------TTCACTTGTTATAACAATG-----GGAAGAAGTCTGAGAGCTGGAGTAAAGGAAG-TTGGTGCTCAGAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3519688 120 + 39453387 CATAGATCTATGGCAAATTTGGGACCACTTCTCCTAAGATAGG---AATTTTTAAA--------------------GTC-------TTCACTTGTTATAACAATG-----GGAAGAAGTCTGAGAGCTGGAGTAAAGGAAG-TTGGTGCTCAGAAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1142136 120 + 25348628 CATAGATCTATGGCAAATTTGGGACCACTTCTCCTAAGATAGG---AATTTTAAAA--------------------GTC-------TTCACTTGTTATAACAATG-----GGAAGAAGTCTGAGAGCTGGAGTAAAGGAAG-TTGGTGCTCAGAAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5152441 120 + 48547382 CATAGATCTATGGCAAATTTGGGACCACTTCTCCTAAGATAGG---AATTTTAAAA--------------------GTC-------TTCACTTGTTATAACAATG-----GGAAGAAATCTGAGAGCAGGAGTAAAGGAAG-TTGGTGCTCAGAAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 55602 120 + 130402 CATAGATCTATGGCAAATTTGGGACCACTTCTCCTAAGATAGG---AATTTTAAAA--------------------GTC-------TTCAGTTGTTATAACAATG-----GGAAGAAGTCTGAGAGCTGGAGTAAAGGAAG-TTGGTGCTCAGAAA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4193976 92 + 12320365 CATAGATCTATGGCA-------------------------------AATTTTCAAA--------------------GTC-------TTCACTTGTTATAACAATG-----GGAAGAAGTCTGAGAGCTGGAGTAAAGGAAG-TTGGTGCTCAGAAA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145655307 111 + 190850796 CAAAGATCTATGGCAAATTTTGGGCCGCTTCTCCTAAGTCAGG---AATTTTAAAA--------------------GAC--------TTAATTATCATAACAATG-----GGAGGAAGGCTGAGAGTCGGAGT---------TTGGTGCTCAGATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14565998 121 + 15139346 CAAAGATCTATGGCAAATTTTGGGCCACTTCTCCTAAGTCAGG---AATTTTTAAA--------------------GAC-------TTTAATGACCATAACAATG-----GGAAGAAGGCTGAGAGTTGGAGTAAGGGAAAGTTGGTGCTCAGATA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 392101 121 + 3802414 CAAAGATTTATGGCAAATTTTGGGCCACTTCTCCTGAGTCAGA---AATTTTAAAA--------------------GAC-------TTTAATCATCATAACAATG-----GGAAGAAGGCTGAGAGTTGGAGTAAGGGAAAGTTGGTGCTTAGATA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9751508 121 + 11631747 CAAAGATCTATGGCAAATTTTGGGCCACTTCTCCTAAGTCAGG---AATTTTAAAA--------------------GAC-------TTTAATTATCATAACAATG-----GGAAGAAGGCTGAGAGTTGGAGTAAGGGAAAGTTGGTACTCAGATG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21699442 133 - 63241923 TATAGATCTATGGCAAATTTTAGGTCATTTCTTCTAGGACAGA---AAAAAAAAAAAAAAAAACCTTAGACTCTTCACC-------TTTCATTTCCATAGTAATG-----AAAAAGAATAT-------GGAGCAAGAGAAT-TTGGTGCTCAGAAA i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 111878 135 + 255898 CATAGGTTTTTAGCAAATTTTAGATCATTTCTACTAAATAAGGGGCAATATCTAGG--------------------ACCCCCCTCTTTCCATTTTCATAGAAACAAGGGTGGAGAGAGTCAGAAAGCATGAGTGAAGGAGG-TTGATGCTCAAAAA i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693069 336 + 1045278 I a score=79347.000000 s hg38.chr9_KI270719v1_random 135296 6 + 176845 TATTAA s panTro5.chr4 86965855 6 + 194502333 TATTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87742204 6 + 195804263 TATTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 28512 6 + 36344 TATTAA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42536074 6 + 85365473 TATTAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145381042 6 - 190429646 TATTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144406483 6 - 189454096 TATTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3519808 6 + 39453387 TATTAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1142256 6 + 25348628 TATTAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5152561 6 + 48547382 TATTAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 55722 6 + 130402 TATTAA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4194068 6 + 12320365 TATTAA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145655418 6 + 190850796 TATTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14566119 6 + 15139346 TATTAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 392222 6 + 3802414 TATAAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9751629 6 + 11631747 TATTAA i aotNan1.NW_018493494v1 C 0 C 0 s tarSyr2.KE948818v1 693405 6 + 1045278 TACTAA i tarSyr2.KE948818v1 I 336 I 1767 s canFam3.chr13 21699575 6 - 63241923 TATTAG i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 112013 6 + 255898 TATTGC i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I a score=3006757.000000 s hg38.chr9_KI270719v1_random 135302 295 + 176845 CTACCATTTAT-ATAGGATA-TCC----------TTATGAGATAATCTTAAAGACAAATGAGGCTAAAATAGTAATACGAGTTATTTAGCCAAGTTTTCCAG---CAGGAAGAAGG-AAATAAGCAGTGAACTAAAAA---------------GCATA-CAAGATACAGAGGAGCAGGTTAATTGAAGCCATTGCAGCAGAA--ATTGAGAAG-AATAAACAGGAGTTAGAAGATGAGAGCAAGCAATTGCAAGTGGAGTGGGCTGAGCTGGAATTA----TGGTGTAGAAAATGACTGGTTGAGAAAAACCCAAACAAATATTTCTATA--------ATGT s panTro5.chr4 86965861 301 + 194502333 CTACCATGTAT-ACAGCATA-TCCAAGAGAACATTTATGAGATAATCTTAAAGTCAAATGAGGCTAAAATATTAATACAGGTTATTTAGCAAAGTTTTCCAA---CAGGAAGAAGG-AAAAAAGCTGTGAGCAAAAAA---------------ACATA-CAGGATATGGAGGAGCAGGTTAAATGAAGCCATTAAAGCAGAA--TTTGAGAAG-AATAAACAGGAGTTAGAAGATGAGAGCAAGCAATTGCAAGTGGAGTGGGCTGAGCTGGAATTA----CGGTATGGAAAATGACTG----AGAAAAACCCAAACAAATGTTTGTATA--------ATAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87742210 301 + 195804263 CTACCATTTAT-ACAGCATA-TCCAAGAGAACATTTATGAGATAATCTTAAAGTCAAATGAGGCTAAAATATTAATACAGGTTATTTAGCAAAGTTTTCCAA---CAGGAAGAAGG-AAAAAAGCTGTGAGCAAAAAA---------------ACATA-CAGGATATGGAGGAGCAGGTTAAATGAAGCCATTAAAGCAGAA--ATTGAGAAG-AATAAACAGGAGTTAGAAGATGAGAGCAAGCAATTGCAAGTGGAGTGGGCTGAGCTGGAATTA----CGGTATGGAAAATGACTG----AGAAAAACCCAAACAAATGTTTGTATA--------ATAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 28518 295 + 36344 CTACCATTTAT-ATAGGATA-TCC----------TTATGAGATAATCTTAAAGCCAAACGAGGCTAAAATATTAATACGAGTTATTTAGCCAAGTTTTCCAG---CAGGAAGAAGG-AAATAAGCAGTGAACTAAAAA---------------GCATA-CAAGATACAGAGGAGCAGGTTAATTGAAGCCATTGCAGCAGAA--ATTGAGAAG-AATAAACAGGAGTTAGAAGATGAGAGCAAGCAATTGCAAGTGGAGTGGGCTGAGCTGGAATTA----TGGTGTAGAAAATGACTGGTTGAGAAAAACCCAAACAAATATTTCTATA--------ATGT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42536080 299 + 85365473 CTACCAT---T-ATAGGATA-TACAAGAGAACATTTATGGGATAATCTTAAAGTCAAATGAGGCTAAAATATTAATACAGGTTATTTAGCAAAGTTTTCCAA---CAGGAAGAAGGAAAAAAAGCAGTGAGCCAAAAA---------------GCGTA-CAGGATACAGAGGAGCAGGTTAAATGAAGGCATTAAATCAGAA--ATCGAGAAG-AATAAACAGGAGTTAGAAGATGAGAGCAAGCAATTGCAAGCGGAGTGGGCTGAGCTGGAATTA----CGGTGTAAAAAATGACTG----AGAAAAACCCAAACAAATGTTTGTATA--------ATGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145381048 299 - 190429646 CTACCATTTAT-ATAAGATA-TCCAAGGGAACATTTATGAGATAATCTTAAAGTCCAATGAGACTAAAATATTAATACAGGTTGTTTAGCCAAGTTTTCCAA---CAGGAAGAAGG-AAACAAGCAGTGAGCCAAAAA---------------GCATG-CAGGATACAGAGGAGCAGGTTAAATGAAGCCATTAAAGCAGAAATATTGAGAAG-AACAAATAGGAGTTAGCAGATGAGAGCAAGCAGTTGCAAGTGGAGTGGGCTGAGCTAGAATTA----TGGTGTAGAAAACGACTG----AGAAGAACCCAAACAAATGATTGTATA------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144406489 299 - 189454096 CTACCATTTAT-ATAAGATA-TCCAAGGGAACATTTATGAGATAATCTTAAAGTCCAATGAGACTAAAATATTAATACAGGTTGTTTAGCCAAGTTTTCCAA---CAGGAAGAAGG-AAACAAGCAGTGAGCCAAAAA---------------GCATG-CAGGATACAGAGGAGCAGGTTAAATGAAGCCATTAAAGCAGAAATATTGAGAAG-AACAAATAGGAGTTAGCAGATGAGAGCAAGCAGTTGCAAGTGGAGTGGGCTGAGCTAGAATTA----TGGTGTAGAAAACGACTG----AGAAGAACCCAAACAAATGATTGTATA------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3519814 299 + 39453387 CTACCATTTAT-ATAAGATA-TCCAAGGGAACATTTATGAGATAATCTTAAAGTCCTATGAGACTAAAATATTAATACAGGTTGTTTAGCCAAGTTTTCCAA---CAGGAAGAAGG-AAACAAGCAGTGAGCCAAAAA---------------GCATG-CAGGATACAGAGGAGCAGGTTAAATGAAGCCATTAAAGCAGAAATATTGAGAAG-AACAAATAGGAGTTAGCAGATGAGAGCAAGCAGTTGCAAGTGGACTGGGCTGAACTAGAATTA----TGGTGTAGAAAACGACTG----AGAAGAACCCAAACAAATGATTGTATA------------ i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1142262 303 + 25348628 CTACCATTTAT-ATAAGATA-TCCAAGGGAACATTTATGAGATAATCTTAAAGTCCAATGAGACTAAAATATTAATACAGGTTATTTAGCCAAGTTTTCCAA---TAGGAAGAAGG-AAACAAGCAGTGAGCCAAAAA---------------GCATA-CAGGATACAGAGGAGCAGGTTAAATGAAGCCATTAAAGCAGAAATATTGAGAAG-AACAAACAGGAGTTAGCAGATGAGAGCAAGCAGTTGCAAGTGGAGTGGGCTGAGCTAGAATTA----TGGTGTAGAAAACAACTG----AGAAGAACCCAAACAAATGATTGTATAATGT-------- i cerAty1.NW_012002843v1 C 0 I 12 s chlSab2.chr27 5152567 299 + 48547382 CTACCATTTAT-ATAGGATA-TCCAAGGGAACATTTATGAGATAATCTTAAAGTCAAATGAGACTAAAATATTAATACAGGTTATATAGCCAAGTTTTCCAA---CAGGAAGAAGG-AAACAAGCAGTGAGCCAAAAA---------------GCATA-CAGGATACAGAGGAGCAGGTTAAATGAATCCATTAAAGCAGAAATATTGAGAAG-AACAAACAGGAGTTAGAAGATGAGAGCAAGCAGTTGCAAGTGGAATGGGCTGAGCTAGAATTA----TGGTGTAGAAAACGACTG----AGAAGAACCCAAACAAATGATTGTATA------------ i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 55728 299 + 130402 CTACCATTTAT-ATAAGATA-TCCAAGGGAACATTTATGAGATAATCTTAAAGTCCAATGAGACTAAAATATTAATACAGGTTATTTAGCCAAGTTTTCCAA---TAGGAAGAAAG-AAACAAGCAGTGAGCCAAAAA---------------GCATA-CAGGATACAGAGGAGCAGGTTAAATGAAGCCATTAAAGCAGAAATATTGAGAAG-AACAAACAGGAGTTAGCAGATGAGAGCAAGCAGTTGCAAGTGGAGTGGGCTGAGCTAGAATTA----TGGTATAGAAAACAACTG----AGAAGAACCCAAACAAATGATTGTATA------------ i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4194074 303 + 12320365 CTACCATTTAT-ATAGGATA-TCCAAGGGAACATTTATGAGATAATCTTAAAGTCCAATGAGGCTAAAATATTAATACAGGTTATTTAGCCAAGTTTTCCAA---CAGGAAGAAGG-AAACAAGCAGTGAGCCAAAAA---------------GCATA-CAGGATACAGAAGAGCAGGTTAAATGAAGCCATTAAAGCAGAAATATTGAGAAG-AACAAACAGGAGTTAGAAGACGAGAGCAAGCAACTGCAAGTGGAGTGAGCTGAGCTAGAATTA----TGGTGTAGAAAATGACTG----AGAAGAACCCAAACAAATGATTGTGTA----ATGA---- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145655424 303 + 190850796 CTATCTTTCAT-ATAGGATG-TCCAAGGG-ACGTTTATGAGATAATCTTGAAAACAAATGAGCCTACAATATTAATACAGGTTAGTTAGCTGAATTTC-CAG---CAGGAAGAAGG-AAACAAGCACTGAGCCAAAAA---------------GCATA-CAGGATACATAAGAGAAGGTTAAATCAAGCCATTACAACAGAA--ATTGAGAAG-AATAAAGAGGAGTTAGAAGATGAGAGCAAGCAATTGCAAGTGGAGTGGGCTGCACTGGAATTA----TGGTGTAGAAAATGGCTGATTGAGAAAAACCTCAACAAATGTTTCTATA--------ATGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14566125 316 + 15139346 CTATCTTTTAT-ATAGGATG-TCCAAGGGAACATTTATGAGATAATCTTAAAAACAAATGAGCCTAAAATATTAATACAGGTTAGTTAGCTGAATTTTGCAG---CAGGAAGAAGG-AAACAAGCAGTGAGCCAAAAAAAAAAAAAAAAAAATGCATA-CAGGATACAGAGGAGAAGGTTAAATCAAGGCATTACAACAGAA--ATTGAGAAG-AATAAAGAGGAGTTAGAAGATGAG----AGCAATTACAAGTGTAGTGGGCTGCACTGGAATTA----TGGTGTAGAAAATGACTGATTGAGAAAAACCCCAACAAATGTTTCTACA--------ATGT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 392228 305 + 3802414 CTATCTTTTAT-ATTGGATG-TCCAAAGAAACATTTATGAGATAATCTTAAAAACAAATGAGCCTAAAATGTTAATACAGGTTGGTTAGCTGAATTTTCCAG---CAGGAAGAAGG-AAACAAGCAGTGAGCCAAAAA---------------GCATA-CAGGATACAGAGGAGAAGGTTAAATCAAGACATTACAATAGAA--ATTGAGAAG-AATAAAGAGGAGTTAGAAGATGAGAGCAAGCAATTGCAAGTGGAGTGGGCTGCGCTGGAATTA----TGGTGTAGAAAATGACTGATTGAGAAAAAACCCAACAAATGTTTCTATA--------ATGT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9751635 302 + 11631747 CTATCTTTTAT-ATAGGATG-TCCAAGGGGACATTTATGAGATAATCTTAAAAACAAATGAGCCTAAAATATTAATACAGGTTAGTTAGCTGAATTTTCCAG---CAGGAAGAAGG-AAACAAGCAGTGAGCCAAAAA---------------GCATA-CAGGATACAGAGGAGAAGGTTAAATCAAGCCATTCCAACAGAA--ATTGAGAAG-AATAAAGAGGAGTT---AGATGAGAGCAAGCAATTGCAAGTGGAGTGGGCTGTGCTGGAATTA----CAGCGTAGAAAATGACTGATTGAGAAAAACCCCAACAAATGTTTCTATA--------ATGT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21699581 308 - 63241923 CTACTATTTAC-ATGAGATG-TCCAAGGGAACA-TTGTGAGGGAATCTTAAGGCTAAACGAGGCTAAA-----AACACCAGTTATTTAGCCAAGTTTTCCAAGACCAGGACAAAGA-AAACAATCAGTGAGCCAAAAG---------------GCAAAGCAGAATGCAGATGAGCGAGTTAAATGAAGCCATTAAAACAGAA--ACTGAGCAGAAATAAAGGAAAGTTAGACAATGAGAACAGGCAGTTGCGTATGGAGTGGGCTGAGCTGGAATTGTACCTGGAACAGATAACGGCCACCTGAGAAGAACCCAAACAAGTGTGTCTATT--------GAAT i canFam3.chr13 C 0 I 5 s dasNov3.JH575793 112019 307 + 255898 CTACCCGTTCTGATGCGATACTCCAAGGGAA--TTTATTAAGAAATCTGAAAGCCAAATAAAGCTAAA-----AATGCCAATTGTTTA-TTAAGTGTTCTAAGT-AAGGAATAAGA-AAACAAGCAGGGAACCCAAAG---------------GTAAAATAGAAGTCCAATGGGCAGGTTAAATGTAGCCATTATAGAAGAA--ATCGGGCAGAAACAAAGAGAAATTTGAAGTTGAGAGGAGGCATTTGCATATGGAGTAAGATGAGGTGGAATTACATTCACTGCAGATAATGACTGATTCAGAAAAGCCTGAATAAGGCTTTCTATG--------AAGT i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I a score=103775.000000 s hg38.chr9_KI270719v1_random 135597 18 + 176845 CATGTGCATAAGATACCT- s panTro5.chr4 86966162 17 + 194502333 CATGTACATAGGATAA-T- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87742511 17 + 195804263 CATGTACATAGGATAA-T- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 28813 18 + 36344 CATGTGCATAAGATACCT- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42536379 17 + 85365473 CATGTACATGGGATAA-T- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145381347 16 - 190429646 -ATGTACATAGGATAA-C- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144406788 16 - 189454096 -ATGTACATAGGATAA-C- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3520113 16 + 39453387 -ATGTACATAGGATAA-C- i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5152866 16 + 48547382 -ATGTACATAGGATAA-T- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 56027 16 + 130402 -ATGTACATAGGATAA-C- i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4194377 17 + 12320365 CATGTACATAGGATAA-T- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145655727 17 + 190850796 CATGTACATATGATAC-A- i calJac3.chr3 C 0 I 1 s saiBol1.JH378162 14566441 17 + 15139346 CATGTACATATGATAC-A- i saiBol1.JH378162 C 0 I 1 s cebCap1.NW_016107603v1 392533 17 + 3802414 CATGTACATAGGATAC-A- i cebCap1.NW_016107603v1 C 0 I 1 s aotNan1.NW_018493494v1 9751937 17 + 11631747 CATGTACATATGATAC-A- i aotNan1.NW_018493494v1 C 0 I 1 s canFam3.chr13 21699894 11 - 63241923 CATGGATATAT-------- i canFam3.chr13 I 5 C 0 s dasNov3.JH575793 112326 18 + 255898 TATGTCCATGGGATGT-AG i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I e cerAty1.NW_012002843v1 1142565 12 + 25348628 I a score=1061948.000000 s hg38.chr9_KI270719v1_random 135615 127 + 176845 GTAG---ATGTTATCAAGGTATAT----ACATAAACTACCTGTCATTAGAGCTAATTTCTTAGCAAATTATTCATAAAAGTTTATAACTTTGTGAGGCAT-TACG-GACACCAAAACTAATGATTTGGCATTTCCA- s panTro5.chr4 86966179 127 + 194502333 ATAG---ATTTCATCAATGTATAT----AAATAAACTACCTGCCATTATGGCTAATTTCTTAGCAAATTATTCATAAAAGTTCATACCTTTGTGAGGCAT-TACA-GACACCAAAACTAACGACTTGGCATTTCCA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87742528 127 + 195804263 ATAG---ATTTCATCAATGTATAT----AAATAAACTACCTGCCATTATGGCTAATTTCTTAGCAAATTATTCATAAAAGTTTATAACTTTGTGAGGCAT-TACA-GACACCAAAACTAACGACTTGGCATTTCCA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 28831 127 + 36344 GTAG---ATGTTATCAAGGTATAT----AAATAAACTACCTGTCATTAGAGCTAATTTCTTAGCAAATTATTCATAAAAGTTTATAACTTTGTGAGGCAT-TACA-GACACCAAAACTAATGATTTGGCATTTCCG- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42536396 127 + 85365473 ATAG---ATTTCATCAATGTATAT----AAATAAGCTACCTGCCATTACAGCTGATTTCTTAGCAAATTACTCATAAAAGTTCATAACTTTGTGAGGCAT-TACA-GACACCAAAACTAATGACTTGGCATTTCCA- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145381363 118 - 190429646 ATAG---ATTTCATCAAGGTATATAAACAAATAAACTACCTGCCATTACAACTAATTTCTTAGCAAATTATTCATAAAAGTGTATAACTTTGTGAGGCAG-TACA-GATACCAAAACTC--------ACAT------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144406804 118 - 189454096 ATAG---ATTTCATCAAGGTATATAAACAAATAAACTACCTGCCATTACAACTAATTTCTTAGCAAATTATTCATAAAAGTGTATAACTTTGTGAGGCAG-TACA-GATACCAAAACTC--------GCAT------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3520129 118 + 39453387 ATAG---ATTTCATCAAGGTATATAAACAAATAAACTACCTGCCATTACAACTAATTTCTTAGCAAATTATTCATAAAAGTGTATAACTTTGTGAGGCAG-TACA-GATACCAAAACTC--------GCAT------ i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1142577 131 + 25348628 ATAG---ATTTCATCAAGGTATATAAACAAATAAACTACCTGCCATTACAACTAATTTCTTAGCAAATTATTCATAAAAGTGTATAACTTTGTGAGGCAG-TACA-GATACCAAAACTAATGACTTGGCATTTCCA- i cerAty1.NW_012002843v1 I 12 C 0 s chlSab2.chr27 5152882 127 + 48547382 ATAG---ATTTCATCAAGGTATAT----AAATAAACTACCTGCCATTACAACTAATTTCTTAGCAAATTGTTCATAAAAGTTTACAACCTTGTGAGGCAG-TACA-GACACCAAAACTAATGACTTGGCATTTCCA- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 56043 131 + 130402 ATAG---ATTTCATCAAGGTATATAAACAAATAAACTACCTGCCATTACAACTAATTTCTTAGCAAATTATTCATAAAAGTGTATAACTTTGTGAGGCAG-TACA-GATACCAAAACTAATGACTTGGCATTTCCA- i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4194394 130 + 12320365 ATAGATTATTTCATCAAGGTATGT----AAGTAAACTACCTGCCATTACAACTAATTTCTTAGCAAATTATTCATAAAAGTTTATAACTTTGTGAGGCAG-TACA-GACACCAAAACTAATGACTTGGCATTTTCA- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145655745 122 + 190850796 ATAG---ATTTCATCAAGGTATTT----AAATAAACTACCTGGAATTATAGCCAATTCCTTAGAAGATCATTCATAAAAGCTTATAACTTTGTGAGGCAG-------ACACAAAAGCTAATGACTTGACATTTCCA- i calJac3.chr3 I 1 C 0 s saiBol1.JH378162 14566459 119 + 15139346 ATAG---ATTTCATCAAGGTATTT----AAATAAACTACCTGGCATTATAGCTAATTCCTT---AGATCATTCATAAAAGTTTACAACTTTGTGAGGCAG-------ACAGGAAAGCTAATGACTTGACATTTCCA- i saiBol1.JH378162 I 1 C 0 s cebCap1.NW_016107603v1 392551 120 + 3802414 ACAG---ATTTCATCAAGGTATTT----AAATAAACTACCTGGCATTATAGCTAATTCCTTAGAAGATCATTCATAAAAGTTTATAACTTTGTGAGGCAG-------ACACCAAAGCTAATGAC--AACATTCCCA- i cebCap1.NW_016107603v1 I 1 C 0 s aotNan1.NW_018493494v1 9751955 114 + 11631747 ATAG---ATTTCATCAAGGTATTT----AAATAAACCACCTGGCATTATAGCTAATTCCTTAGAAGATCACTTATAAAAGTTTATAACTTTGTGAGGCAG---------------GCTAATAACTTGACATTTCCA- i aotNan1.NW_018493494v1 I 1 C 0 s canFam3.chr13 21699905 126 - 63241923 GTGG---CTTTCATCAAGATGAAT----GGGTAACCTACCTGTCATTCCAGCAAACTGCACCTAGAAGTATTCATAAAACTGCAGGACTTTGTGAGGCAC-CGTAGGATGCCGAAGGTAATGAC--GGTATTTCAA- i canFam3.chr13 C 0 I 1 s dasNov3.JH575793 112344 104 + 255898 CTGA---ATTTCAGCAAGGTCTAT----AAATAACTTTCCTTTCATTCCAG------------------------AAAACTTCATAA-TTTGTGAAAAAATTGCA-AAGACTACAGGTAATGACTTGGCATTTAAAA i dasNov3.JH575793 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I a score=2317991.000000 s hg38.chr9_KI270719v1_random 135742 221 + 176845 TGGGCCAATTTGTCTAAAGAACTATCTTTTACACTTTACTG-----TTTTTTAATAAGCAATACAGTGCTCAAAAAGTCTTTTATACCAAGTCCAGTAGGTTGATAACATTGAGTATAACTGAGCATTGCTTTGTGTCTACCCTC-AGGC-AAATCTGGAGATTTTC---TCAAGCTTCTTTATGAAAATGGAGAAACCTCACAAGAGATGCTAATGGACAGCTGACCCTG----- s panTro5.chr4 86966306 216 + 194502333 TGGCCCAATTTGTCTAAAGAACTATCTTTTACACTTTACTG-----TTTTTTAATAGGCAGTAAGGTGCCCAAAAAGTCTTTTATATCAAGTTCAGTAGGTTGATAACATTGACTATAACTGAGCGTTGCTTTGCTTCTACCCTC-AGGT-AATTCTGAAAATTTTC---TCATGCCTCTTTATGAAAATGGAGAGACCTCACAAGAGATGCTAATGAACAGCTCA---------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87742655 216 + 195804263 TGGCCCAATTTGTCTAAAGAACTATCTTTTACACTTTACTG-----TTTTTTAATAGGCAGTAAGGTGCCCAAAAAGTCTTTTATATCAAGTTCAGTAGGTTGATAACATTGACTATAACTGAGCGTTGCTTTGCTTCTACCCTC-AGGT-AATTCTGAAAATTTTC---TCATGCCTCTTTATGAAAATGGAGAGACCTCACAAGAGATGCTAATGAACAGCTCA---------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 28958 220 + 36344 TGGCCCAATTTGTCTAAAGAACTATCTTTTACACTTTACTG-----TTTTTTAATAAGCAATACAGTGCTCAAAAAGTCTTTTATACCAAGTCCAGTAGGTTGATAACATTGAGTATAACTGAGCATTGCTTTGTGTCTACCCTC-AGGC-AAATCTGGAGATTTTC---TCAAGCCTCTTTATGAAAATGGAGAGACCTCACAAG-GATGCTAATGGACAGCTGACCCTG----- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42536523 216 + 85365473 TGGCCCAATTTGTCTAAAGAACTATCTTTTACACTTTACTG-----GTTTTTAATAGGCAATAAGGTGCCCAAAAAGTCTTTTATATCAAGTTCAGTAGGTTGATAACATTGTCTATAACTGAGCGTTGCTTTGATTCTACCCTC-AGGT-AAATCTGAAAATTGTC---TCATGTCTCTTTATGAAAATGGAGAGACCTCACAAGAGATGCTAACGAACAGCTCA---------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145381481 214 - 190429646 TGACCCAATTTGTCTAAAGAACTATCTTTTACACTTCA--G-----TTTTTTAATAGGCAATAAAGTGCCCCAAAAGTCTTCTATACCAAGTTCAGTAGGTTGATAACATTGACTATAACTGAGCATTGCTTTGTTTCTACCCTC-AGGT-AAATCTGAAAATTTTC---TCCTGCCTCTTTATGAAAATGGAGAAACCTCACAAGAGATGCTAATGAACAGCTGA---------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144406922 216 - 189454096 TGACCCAATTTGTCTAAAGAACTATCTTTTACACTTCACTG-----TTTTTTAATAGGCAATAAAGTGCCCCAAAAGTCTTCTATACCAAGTTCAGTAGGTTGATAACATTGACTATAACTGAGCATTGCTTTGTTTCTACCCTC-AGGT-AAATCTGAAAATTTTC---TCCTGCCTCTTTATGAAAATGGAGAAACCTCACAAGAGATGCTAATGAACAGCTGA---------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3520247 216 + 39453387 TGACCCAATTTGTCTAAAGAACTATCTTTTACACTTCACTG-----TTTTTTAATAGGCAATAAAGTGCCCCAAAAGTCTTCTATACCAAGTTCAGTAGGTTGATAACATTGACTATAACTGAGCATTGCTTTGTTTCTACCCTC-AGGT-AAATCTGAAAATTTTT---TCCTGCCTCTTTATGAAAATGGAGAAATCTCACAAGAGATGCTAATGAACAGCTGA---------- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1142708 216 + 25348628 TGACCCAATTTGTCTAAAGAACTATCTTTTACACTTCACTG-----TTTTTTAATAGGCAATAAAGTGCCCCAAAAGTCTTTTATACCAAGTTCAGTAGGTTGATAACATTGACTATAACTGAGCATTGCTTTGTTTCTACCCTC-AGGC-AAATCTGAAAATTTTC---TCCTGCCTCTTTATGAAAATGGAGAAACCTCACAAGAGATGCTAATGAACAGCTGA---------- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5153009 216 + 48547382 TGACCCAATTTGTCTAAAGAACTATCTTTTACACTTCACTG-----TTTTTTAATAGGCAATAAGGTGCCCCAAAACCCTTTTATACCAAGTTCAGTAGGTTGATAACATTGACTATAACTGAGCATTGCTTTGTTTCTACCCTC-AGGC-AAATCTGAAAATTTTC---TCATGCCTCTTTATGAAAATGGAGAAACCTCACAAGAGATGCTAATGAACAGCTGA---------- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 56174 216 + 130402 TGACCCAATTTGTCTAAAGAACTATCTTTTACACTTCACTG-----TTTCTTAATAGGCAATAAAGTGCCCCAAAAGTCTTTTATACCAAGTTCAGTAGGTTGATAACATTGACTATAACTGAGCATTGCTTTGTTTCTACCCTC-AGGC-AAATCTGAAAATTTTC---TCCTGCCTCTTTATGAAAATGGAGAAACCTCACAAGAGATGCTAATGAACAGCTGA---------- i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4194524 217 + 12320365 TGACCCAATTTGTCTAAAGAACTATCTTTTACACTTCACTG-----TTTTTTAATAGGCAATAAGGTGCCCCAAAAGTCTTTTATACCAAGTTCAGTAGGTTGATAACATTGACTATAACTGAGCATTGCTTTGTTTCTACCCTC-AGGCAAAATCTGAAAATTTTC---TCATGCCTCTTTATGAAAATAGAGAAACCTCAGAAGAGATGCTAACGAACAGCTGA---------- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145655867 217 + 190850796 TGACCCAAATAGTCTAAAGAACTATCTTTTATGCTTTACTA----TTTTTTTAATAGGCAATAAGGTGCCCAAAAAGTCTTTTATAGCAAGTTCAGTAGGTTCATAACACTGACTATAACTGAGCATTGCTTTGTGTCTACCCTC-AGGC-AAATCCGGAGATTTTC---TCATGCCTCTTAATGAAAATGGAGAGATCTCACAAGAGATGCTAATGGACAGCTAA---------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14566578 221 + 15139346 TGGCCCAAATAGTCTAAAGAACTATCTTTTACACTTTACTGTTTTTTTTTTTAATAGGCAATAAGGTGCCCAAAAAGTCTTTTATACCAAGTTCAGTAGGTTGATAACACTGACTAATACTGAGCATTGTTTTGTGTCTACCCTT-AGGC-AAATCTGGAGATTTTC---TCATGCCTCTTTATGAAAATGGAGAGATCTCACAAGAGATGCTAATGGACAGCTGA---------- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 392671 217 + 3802414 TGGATGAAATAGTCTAAAGAACTATCTTCTACACTTTACTG----TTTTTTTAATAGGCAATAAGGTGCCCAAAAAGACTTTTATATCAAGTTCAGTAGGTTGATAACACTGACTATAACTAAGCATTGCTTTGTGTCTACCCTC-AGGC-AAATCCGGAGATTTTC---TCATACCTCTTTATGAAAATGGAGAGATCTCACAAGAGATGCTAATGGACAGCTGA---------- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9752069 217 + 11631747 TGGCCCAAATAGTCTAAAGAACTATCTTTTACACTTTACTG----TTTTTTTAATAGGCAATAAGGTGCCCAAAAAGTATTTTATACCAAGTTCAGTAGGTTGATAACACTGACTATAACTGAGCATTGATTTGTGTCTACCCTC-AGGC-AAATCTGGAGATTTTC---TCATGCCTCTTTATGAAAATGGAGAGATATCACAAGAGATGCTAATGGACAGCTGA---------- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21700032 219 - 63241923 TGCCCCAGTTTGTCTGAAAGACTATCTTTTACTCTTCACCC-----TCTTTCAAAAGGCAAAAGGGCGACCAAAAGGTCTTTCATACCTACTTAGGTAGGACAGTAACATTGACCATGACGGATCATTGCCTGGAGTCCACACCT-AGTC-AAATATTCCAATTTTCTTATCCTTCCTCTTCATGAAAATGTAGAAACCTCACAAGAGATGCCAATAGACAAAAGA---------- i canFam3.chr13 I 1 C 0 s dasNov3.JH575793 112448 186 + 255898 TGCTCCAGTTTGTCAGAAGTGCCATCTGTCATGCTTCATCC-----TCTTTGAATAGGTTCTAA-GTTCTCAAAAGGTCTTTCATGCCTATTTT----------------------TCACTAAG------------TCCACCCTTAAGGC-AAATCTGAAGGTTTTC---CCATTCTTCTTCATGAAACTGGATAAACAATAAAAGAAATGGT-ATGAACAGGCGA-----CCCTG i dasNov3.JH575793 C 0 I 2209 e papAnu3.chr5 138758771 9100 - 178775436 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I a score=5122850.000000 s hg38.chr9_KI270719v1_random 135963 530 + 176845 CTCCCTGCTCCATCACAGGTTGTAGAGTATTAATTCCCAAGTTACCCAGACATTTAGTTGTGAATGTGCAAAAATGGTTTAGGTTCAAATGTTTTC-AACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGTAGTACTAA-GGGAAATGTAATTAATATATAATATCAAAACTTAAGCATAGCACCATAACACCTAATTTTTGATGATGTCAA-ATACTTAAAGTTCTCCCTTTTTATTTTCTGGTGAAAGGTGCATAGT-----ATACAAACCTCTAC-TAACTTCTTGGGCTTCTG--AATAAAGGAAAGGACTACCTAATGACAGTAATAGCTTGACTGCTGAAGAATTATGTCAATTAAC---------AAAAATTGTTTCATAGGAAAAAGATGAATTGTCTCTTCAAAGT--TTT----TTTTAAGCATGGGTGACCAAAACCATCACATACTTAGAAGAAAATATTGCATTGATTTATACAAGATATGCTGTAC-ACGTTACAGAAG------ATTCGTGTTTAATAATGCATCTTG-----------------TAAAAATCTTAGAGAGCTATA s panTro5.chr4 86966522 529 + 194502333 --CCCCACCCCATCACAGGTTATAGAGTATTAATTCTCAAATTACCCAGACCTTTAGTTCTGAATGTGAAAAAATGGTTTAGGCTAAAATGTTTTT-GACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGTAGTAATAA-GGGAAAAGTAATTAATATATAACATCAAAACTTAAGCACACCACCATAACACCTGATTTTTGATGATGCCAA-ATACTTAAAGTTTTCCCTTTTTATTTTCTGGGGAGTGGTGCTTAGC-----ATACAAACCTCTAC-TAACTTCTTGGGCTTGAA--AATAAAGGAAAGGACTGCCTAATGACAATAATATCTTGACTGCTGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATCGGAAAAAGATGAATTGTTTCCTCAAAGTC-TTT----TTTTAAGTATGGGTGACCAAAACCATCCCATACTTAGAAGATAATATTACACTGTTTTATACAAGATATGCTGTAC-TTGTTACAGAAG------ATTCACGTTTAATAATGCAACTTT-----------------TAAAAATCTTAGCGAGCTATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87742871 529 + 195804263 --CCCCACCCCATCACAGGTTATAGAGTATTAATTCTCAAATTACCCAGACCTTTAGTTCTGAATGTGAAAAAATGGTTTAGGCTAAAATGTTTTT-GACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGTAGTAATAA-GGGAAAAGTAATTAATATATAACATCAAAACTTAAGCACACCACCATAACACCTGATTTTTGATGATGCCAA-ATACTTAAAGTTTTCCCTTTTTATTTTCTGGGGAGTGGTGCTTAGC-----ATACAAACCTCTAC-TAACTTCTTGGGCTTGAA--AATAAAGGAAAGGACTGCCTAATGACAATAATATCTTGACTGCTGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATAGGAAAAAGATGAATTGTTTCCTCAAAGTC-TTT----TTTTAAGTATGGGTGACCAAAACCATCCCATACTTAGAAGATAATATTACACTGTTTTATACAAGATATGCTGTAC-TTGTTACAGAAG------ATTCACGTTTAATAATGCAACTTT-----------------TAAAAATCTTAGCGAGCTATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 29178 527 + 36344 CTCCCTGCTCCATCACAGGTTGTAGAGTATTAATTCCCAAGTTACCCAGACATTTAGTTCTGAATGTGCAAAAATGGTTTAGGTTCAAATGTTTTC-AACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGTAGTACTAA-GGGAAATGTAATTAATATATAATATCAAAACTTAAGCATAGCACCATAACACCTAATTTTTGATGATGTCAA-ATACTTAAAGTTCTCCCTTTTTATTTTCTGGTGAAAGGTGCATAGT-----ATACAAACCTCTAC-TAACTTCTTGGGCTTCTG--AATAAAGGAAAGGACTACCTAATGACAGTAATAGCTTGACTGCTGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATAGGAAAAAGATGAATTGTCTCTTCAAAG---TTT----TTTTAAGCATGGGTGACCAAAACCATCCCATACTTAGAAGAAAATATTGCATTGTTTTATACAAGATATGCTGTAC---ATTACAGAAG------ATTCATGTTTAATAATGCATCTTG-----------------TAAAAATCTTAGAGAGCTATA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42536739 529 + 85365473 --CCCCACCCCATCACAGGTTATAGAGTATTAATTCCCAAATTACCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTCGGCTCAAATGTTTTC-AACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGTAGTAATAA-GGGAAAAGTACTTAATATATAATATCAAAACTTAAGCGTAGCACCATAACACCTGATTTTTGATGATGCCAA-ATACTTAAAGTTTTCCCTTTTTATTTTCTAGGGAGAGGTGCATAGC-----ATACAAACCTCTAC-TAACTTCTTGGGCTTGTA--AATAAAGGAAACGACTGCCTAATGACAATAATATCTTGACTGCTGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATAGGAAAAAGATGAATTGTCTCCTCAAAGTC-TTT----TTTTAAGTATGGGTGACCAAAACCATCCCATACTTAGAAGATAATATTACACTGTTTTATACAAGATATGCTGTAC-ATGTTACAGAAG------ATTCACGTTTAATAACGCAGCTTT-----------------AAAAAATCTTAGCGAGCTATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145381695 527 - 190429646 --CCCCACCCCATCACAATTTGTAGAGTATTAATTCCCAAATTACCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGTCTCAAATGTTTTC-GACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGCAGTAATAA-GGGAAAAGTAATTAATATATAATATCAAAACTTAAGCCTAACACCATAACACCTAATTTTCGATGATGCCAA-ATACTTAAAGTTTTCCCTTTTTA-TTTCTGGGGAAAGTTGCATAGC-----ATACAAACTTCTAC-TAAATTCTTGGGCTTATA--AATAAAGGAAAGGACTGCCTAATGACAATAATATCTTGACTGCGGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATGGGAAAAAGATGAATTGTCTCCTCAAAGTC-TTT----TTTAAAGTATAGGTGACCAAAACCATCCCGTATATAGAAGACAACATTACACTGTTTTATACAAGATATGTTTTAC-ATGTTACAGAAG------ATTCACATTTAATAATGTAACTTT-----------------T-AAAATCTTAGAAAGCTATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144407138 528 - 189454096 --CCCCGCCCCATCACAATTTGTAGAGTATTAATTCCCAAATTACCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGTCTCAAATGTTTTC-GACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGCAGTAATAA-GGGAAAAGTAATTAATATATAATATCAAAACTTAAGCCTAACACCATAACACCTAATTTTCGATGGTGCCAA-ATACTTAAAGTTTTCCCTTTTTA-TTTCTGGGGAAAGTTGCATAGC-----ATACAAACTTCTAC-TAAATTCTTGGGCTTATA--AATAAAGGAAAGGACTGCCTAATGACAATAATATCTTGACTGCGGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATGGGAAAAAGATGAATTGTCTCCTCAAAGTC-TTT----TTTTAAGTATAGGTGACCAAAACCATCCCGTATATAGAAGACAACATTACACTGTTTTATACAAGATATGTTTTAC-ATGTTACAGAAG------ATTCACATTTAATAATGTAACTTT-----------------TAAAAATCTTAGAAAGCTATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3520463 528 + 39453387 --CCCTGCCCCATCACAATTTGTAGAGTATTAATTCCCAAATTACCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGTCTCAAATGTTTTC-GACTACTGACAAGCTCAAG-----------------AATTCAGAAGAGGCAGTAATAA-GGGAAAAGTAATTAATATATAATATCAAAACTTAAGCCTAACACCATAACACCTAATTTTCGATGATGCCAA-ATACTTAAAGTTTTCCCTTTTTA-TTTCTGGGGAAAGTTGCATAGC-----ATACAAACTTCTAC-TAAATTCTTGGGCTTATA--AATAAAGGAAAGGACTGCCTAATGACAATAATATCTTGACTGCGGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATGGGAAAAAGATGAATTGTCTCCTCAAAGTC-TTT----TTTTAAGTATAGGTGACTAAAACCATCCCGTATATAGAAGACAACATTACACTGTTTTATACAAGATATGTTTTAC-ATGTTACAGAAG------ATTCACATTTAATAATGTAACTTT-----------------TAAAAATCTTAGAAAGCTATA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1142924 529 + 25348628 --CCCCGCCCCATCACAATTTGTAGAGTATTAATTCCCAAATTACCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGTCTCAAATGTTTTC-GACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGCAGTAATAAGGGGAAAAGTAATTAATATATAATATCAAAACTTAAGCCTAACACCATAACACCTAATTTTCGATGATGCCAA-ATACTTAAAGTTTTCCCTGTTTA-TTTCTGGGGAAAGTTGCATAGC-----ATACAAACTTCTAC-TAACTTCTTGGGCTTATA--AATAAAGGAAAGGACTGCCTAATGACAATAATATCTTGACTGCTGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATGGGAAAAAGATGAATTGTCTCCTCAAAGTC-TTT----TTTTAAGTATAGGTGACCAAAACCATCCCGTATATAGAAGACAACATTACACTGTTTTATACAAGATATGTTTTAC-ATATTACAGAAG------ATTCACATTTAATAATGCAACTTT-----------------TAAAAATCTTAGAAAGCTATA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5153225 529 + 48547382 --CCCCGCCCCATCACAATTTGTAGAGTATTAATTTCCAAATTACCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGTCTCAGATGTTTTC-GACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGCAGTAATAA-GGGAAAAGTAATTAATATATAATATCAAAACTTAAGCCTAACACCATAACACCTAATTTTCAATGATGCCAA-ATACTTAAAGTTTTCCCTTTTTA-TTTCTGGGGAAAGTTGCATAGC-----ATACAAACTTCTAC-TAACTTCTTGGGCTTATA--AATGAAGGAAAGGACTGCCTAATGACAATAATATCTCGACTGCTGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATAGGAAAAAGATGAATTGTCTCCTCAAAGTCTTTT----TTTTAAGCATGGGTGACCAAAACCATCCTGTATATAGAAGACAACATTACACTGTTTTATACAAGATATGTTGTAC-ATGTTACAGAAG------ATTCACATTTAATAATGCAACTTA-----------------TAAAAATCTTAGAAAGCTATA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 56390 526 + 130402 --CCCCGCCCCATCACAATTTGTAGAGTATTAATTCCCAAATTACCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGTCTCAAATGTTTTC-GACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGCAGTAATAA-GGGAAAAGTAATTAATATATAATATCAAAACTTAAGCCTAACACCATAACACCTAATTTTCGATGATGCCAA-ATACTTAAAGTTTTCCCTTTT---TTTCTGGGGAAAGTTGCATAGC-----ATACAAACTTCTAC-TAACTTCTTGGGCTTATA--AATAAAGGAAAGGACTGCCTAATGACAATAATATCTTGACTGCTGAAGAATTATGTCAATTAAC---------AAAAATTGCTTCATGGGAAAAAGATGAATTGTCTCCTCAAAGTC-TTT----TTTTAAGTATGGGTGACCAAAACCATCCCGTATATAGAAGACAATATTACACCGTTTTATACAAGATATGTTTTAC-ATGTTACAGAAG------ATTCACATTTAATAATGCAACTTT-----------------TAAAAATCTTAGAAAGCTATA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4194741 522 + 12320365 --CCCCGCCCCATCACAATTTGTAGAGTATTAATTCCCAAATTACCCAGACCTTTAGTTCTGAATGTGCAGAAATGGTTTAGTCTGAAATGTTTTC-GACTACTGACAAGCTCAAG-----------------AATTCAGAGGAGGCAGTAATAA-GGGAAAAGTAATTAATATATAATATCAAAACTTAAGCCTAACACCATAACACCTAATTTTCGATGATGCCAA-ATACTTAAAGCTTTCCCTTTTTA-TTTCTGGGGAAAGGTGCATAGC-----ATACAAACTTCTAC-TAACTTCTTGGGCTTATA--AAT-----AAAGGACTGCCTAATGACAATAATATCTTGACTGCTGAAGAATTGTGCCAATTAAC---------AAAAATTGCTTCATAGGAAAAAGATGAATTGTCTCCTCAAAGTC-TTT----TTTTAAGTATGGGTGACCAAAACCATCCCGTGTATAGAAGACAACATGACACTATTTTATACAAGATATGCTGTAC-ATGTTACAGAAG------ATTCACATTTAATAATGCAACTCA------------------AAAAATCTTAGAAAGCTATA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145656084 529 + 190850796 --CCCTGCCCTATCACAGGCTACAGAGTATTAATTCCCAAATTATTCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGGCTCAAATGTCTTC-GACAACTAACAAGCTCAAA-----------------AATTTAGAGGAGGTAGTAATAA-GGGAAAAGTAATTAATATATAATGTCAAAACATAAGCATAGCAACATAACACCTAATTTCCAATGACGCTAA-ATACTTAAAGTTCTCACCTTTTACTTTCTGGAGAAAGGTGCATTAT-----ATACAAACCTCTGT-GAACTTCTTGGACTTCTG--AATAAAGGAAAGTACTACGTAAAGACAGTAATATCTTGACTGCTGATGAATTATGTCAATTAAT---------AAAAATTGCTTCATAAGAAAAAGATGAATTGTCTCCTCAAAGTC-CTT----TTTTAAGTATGGGTGACCAAAAACATCCCATACTTAGAAGAAAATATTATACTGTTTTATACAAGATATGCTGTAC-ATGTAATAGAAG------ATTCACATTTAATAATATATCTTT-----------------TAAAAATCTTAGAGAGCTATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14566799 529 + 15139346 --CCCTGCCCCATCACAGGCTACAGAGTATTAATTCCCAAATTATCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGGCTCAAACGTCTTC-AACAACTGACAAGCTCAAG-----------------AATTCAGAGGAGGTAGTAATAA-GGGAAAAGTAATTCATATATTATGTCAAAACATAAGCATAGCACCATAACACCTAATTTTAGATGATGCTAA-ATACTTAAAGTTCTCCCCTTTTACTTTCTAGGGAAAGGTGCATTGT-----ATACAAGCTTCTAT-GAACTTCTTGGACTTCTG--AAAAAAGGAAAGTACTACCTAAAGACAGTAATATCTTGGCTGCTGAAGAATCATGTCAATTAAT---------AAAAATTACTTCATAAGAAAAAGATGAATTGTCTCCTCAAAGTC-TTT----TTTTCAGAATGGGTGACCAAAAACATCCCATACTTAGAAGAAAATATTATACTGTTGTATACAAGATATGCTGTAC-ATGTAATAAAAG------AGTCACATTTAATAATGTATCTTT-----------------TAAAAATCTTAGACACCTATA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 392888 523 + 3802414 --CCCTGCCCCATCACAGGCTACAGAATATTAATTCCCAAATTATCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGGTTCAAACGTCTTC-GACAACTGACAAGCTCAAG-----------------AATTCAGAGGAGATAGTAATAA-GGG-AAAGTAATTAATATATTTTTTTCAAA-ACAAGCATAGCACCATAACAGCTAATTTTAGATAATGCTAA-ATACTTAAAGTTCTCCCCTTTTACTTTCTGGGGAAAAGTGCATTGT-----ATACAAACCTTTAT-GAATTTCTTGGACTTCTG--AATAAAGGAAAGTACTACCTAAAGAGAGTAATATCTTGATTGCTGAAGAATTATGTCAATTAAT---------AAAAATTGCTTCATAAGAGAAAGATG----GTCTCCTCAAAGTC-TTT----TTTTAAGTATGGGTGACCAAAAACATCCCATACTTAGAAGAAAATATTATACTGCTTTATACAAGATATGTTGTAC-ATGTAATAGAAG------ATTCACATTTAATAATGAATCTTT-----------------TAAAAATCTTAGAGAGCTATA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9752286 528 + 11631747 --CCCTGCCCTATCACAGGCTACAGAGTATTAATTCCCAAATTATCCAGACCTTTAGTTCTGAATGTGCAAAAATGGTTTAGGCTCAAACATCTTC-GACAACTGACAAGCTCGAG-----------------AATTCAGAGGAGGTAGTAACAA-GGGAAACGTAATTAATATATTATGTCAAAACATATGCAAAGCACCATAACACCTAATTTTAGATGATGCTAA-ACACTTAAAGTTCTCCCCTTTTA-TTTTTGGGGAAAGATGCATTGT-----ATACAAACCTCTAT-GAACTTCTTGGACTTTTG--AAAAAAGGAAAGTATTACCTAAAGACAGTAATATCTTGACTGCTGAAGAATTACGTCAATTAAT---------AAAAATTGCTACATAAGAAAAAGATGAATTGTCTCCTCAAAGTC-TCT----TTTTAAGTATGGGTGAGGAAAAACATTCCATACTTAGAAGAAAATATTATACTGTTTTATACAAGATATGCTGTAC-ATGTAATAGAAG------ATTCACATTTAATAATGTATCTTT-----------------TAAAAATCTTAGAGAGGTATA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21700251 564 - 63241923 -----------------GGTTGTGGACTGTTCATTTCCAACACA-CCAGGCCGTCACTTCTGAAAGTGCAAACACATATTAGG-----GCATTTACAGATGACTGAGAAAGCCAAGGGTAGTTTCAGATTACCAAATCAGAAGAGGTGGGAGGAA-AGG-AAAGTAGTTAA------ATACTGAATCTTAGTTACAGAACCaaaatatttaattt-aaataatGTAAACATGCTTAAAGTTCTTCTCTCTCCGTTTCTGGAGAGAGGTACCTGACCGCTTGCACAAACCTCTACTTACCCCCTTGGGCTTCTAGGAAAGGGGGGAAAAACTACCTAAAGCAAGTAATATTTTGACTGTCGAAGAATTATGTCAATGTGCAGTGTTCTGAGAACTTGTTCAATACAAAGAAAGTAAATAGTCTCCTTGAAGTT-TTTCAAACTTCAAAGATAGGTGACCAAGGACATCTCATACTTAGCAGGACATCATAGGGGATTTTATTAAAAATATGCTGTGTAATGTTATGGAAAAGAATTATTCATCCTTAATAATGCATATTTAATATATGGGAGATATATAGGTACCTTAGGGAACTCTA i canFam3.chr13 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I a score=11849.000000 s hg38.chr9_KI270719v1_random 136493 1 + 176845 A s panTro5.chr4 86967051 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743400 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 29705 1 + 36344 A i gorGor5.CYUI01002260v1 C 0 C 0 s ponAbe2.chr4 151823077 1 - 198332218 A i ponAbe2.chr4 N 0 I 3577 s nomLeu3.chr20 42537268 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382222 1 - 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144407666 1 - 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3520991 1 + 39453387 A i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143453 1 + 25348628 A i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5153754 1 + 48547382 A i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 56916 1 + 130402 A i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4195263 1 + 12320365 A i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145656613 1 + 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567328 1 + 15139346 A i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 393411 1 + 3802414 A i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9752814 1 + 11631747 A i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21700815 1 - 63241923 G i canFam3.chr13 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I a score=2330064.000000 s hg38.chr9_KI270719v1_random 136494 238 + 176845 CCTTACAACATGACTTAAC---CCAAATACATTGAAAACCCCTTGGATTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAGCACGCATAGTTGAAGCAAACATATTCCTTCAAACATAATACTCTTACATAATAGAAAGTGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTTTG-TATTAGCAAACTGAAATTGTTAACTATAAAA---AGTCAA-------------AAATCAAAGGTGCTCTCA- s panTro5.chr4 86967052 235 + 194502333 CCTT-----ATGACTTAAC---CCAAATACATTGAAAACCCCTTGTATTTAGACCTACAGGGAGGTGGCTTTGCTTTCTGTACCATAGCACACATAATTGAAGCAAACATATTCCTTCAAACATAATACTCCTACATAATAGAAAGTGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTGTG-TATTAGCAAACTGAAACTGTTAACTATAAAA-AGAGTCAA-------------AAATCAAAGGAGGTCTCA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743401 235 + 195804263 CCTT-----ATGACTTAAC---CCAAATACATTGAAAACCCCTTGTATTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAGCACACATAATTGAAGCAAACATATTCCTTCAAACATAATACTCCTACATAATAGAAAGTGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTGTG-TATTAGCAAACTGAAACTGTTAACTATAAAA-AGAGTCAA-------------AAATCAAAGGAGGTCTCA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 29706 238 + 36344 CCTTACAACATGACTTAAC---CCAAATACATTGAAAACCCCTTGGATTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAGCACGCATAGTTGAAGCAAACATATTCCTTCAAACATAATACTCTTACATAATAGAAAGTGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTTTG-TATTAGCAAACTGAAATTGTTAACTATAAAA---AGTCAA-------------AAATCAAAGGTGCTCTCA- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537269 235 + 85365473 CCTT-----ATGACTTAAC---CCAAATACTCTGAAAACCCCTTGTATTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAGCACACATAATTGAAGCAAGCATATTCCTTCAAACATAATACCCCTACATAATAGAAAGTGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTGTG-TATTAGCAAACTGAAACTGTTAACTATAAAA-AGAGTCAA-------------AAATCAAAGGGGGTCTCA- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382223 239 - 190429646 CTTT-----ATGACTTAACTAACCAAATACATTGAAAACCCCTTGGATTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAACACACATAGTTGAAGCAAACATATTCATTCAAACATAATACTCCTGCATAATAGAAAGCGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTGTG-TGTTAGCAAACTGAAATTGTTAACTATAAAAAAGAGTCAA-------------AAATGAAAGGGGCTCTAG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144407667 239 - 189454096 CTTT-----ATGACTTAACTAACCAAATACATTGAAAACCCCTTGGATTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAACACACATAGTTGAAGCAAACATATTCATTCAAACATAATACTCCTGCATAATAGAAAGCGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTGTG-TGTTACCAAACTGAAATTGTTAACTATAAAAAAGAGTCAA-------------AAATGAAAGGGGCTCTCG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3520992 239 + 39453387 CTTT-----ATGACTTAACTAACCAAATACATTGAAAACCCCTTGGATTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAACACACATAGTTGAAGCAGACATATTCATTCAAACATAATACTCCTGCATAATAGAAAGCGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTGTG-TGTTAGCAAACTGAAATTGTTAACTATAAAAAAGAGTCAA-------------AAATGAAAGGGGCTCTCG- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143454 239 + 25348628 CTTT-----ATGACTTAACTAACCAAATACATTGAAAACCCCTTGGATTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAACACACATAGTTGAAGCAAACATATTCATTCAAACATAATACTCCTACATAATAGAAAGCGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTGTG-TGTTAGCAAACTGAAATTGTTAACTATAAAAAAGAGTCAA-------------AAATGAAAGGGGCTCTCG- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5153755 239 + 48547382 CTTT-----ATGACTTAACTAACCAAATACATTGAAAACCCCTTGGATTTAGACCCACAGGGAGGTGGTTTTGCTTTCTGTACCATAACACACACAGTTGAAACAAACATATTCATTCAAATATAATACTCCTACATAATAGAAAGCGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTGTG-TGTTAGTAAACTGAAATTGTTAACTACAAAAAAGAGTCAA-------------AAATCAAAGGGGCTCTCA- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 56917 239 + 130402 CTTT-----ATGACTTAACTAACCAAATACATTGAAAACCCCTTGGATTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAACACACATAGTTGAAGCAAACATATTCATTCAAACATAATACTCCTACAAAATAGAAAGCGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTTGTG-TGTTAGCAAACTGAAATTGTTAACTATAAAAAAGAGTCAA-------------AAATGAAAGGGGCTCTCA- i manLeu1.NW_012102858v1 C 0 I 3 s colAng1.NW_012120821v1 4195264 239 + 12320365 CTTC-----ATGACTTAACTAACCAAATATATTGAAAACCCCTTGGCTTTAGACCTACAGGGAGGTGGTTTTGCTTTCTGTACCATAACAAACATAGTTGAAGCAAACATATTCATTCAAACATAATACTCCTACATAACAGAAAGCGTTCTCTGTTTTCTGGATGAAAAGGCATGAGGTCTAGTG-TGTTAGCAAACTGAAATTGTTAACTATAAAAAAGAGTCAA-------------AAATCAAAGGGGCTCTCG- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145656614 240 + 190850796 CCTTATGACATGACTTAAT---CCAAGTACATTGAAAACCCCTTGGACTTAGACCTACAGAGAGGTGGTTTTGTTTTTTGTACCATAGCACACATAGTTGAAGCAAACATATTCCTTTAAACATAATACTCCTACATAACAGAAAGTGTTCTCTGTTTTCTGGATG-AAAGGCATGAGGTCTTGTTCCTTTAGCAAACTGAAATTGTTAACCATAGGA-AGAGCCAA-------------AACTCAAAGGGGCTCTGG- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567329 240 + 15139346 CACTATAACATGACTTAAT---CCAAATACAGTGAAAACCCCTTGGACTTAGACCTACAGAGAGGCGGTTTTGCTTTTTGTGCCATAGCACACATAGTTGAAGCAAACATATTCCTTTAAACATAATACTCTTACATAATAGAAAGTATTCCCTGTTTTCCAGATG-AAAGGAATGAGGTCTTGTGCCCTTAGCAAACTGAAATTGTTAGCTATAGAA-AGAGCCAA-------------AAATCAAAGGGGCTCTGG- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 393412 240 + 3802414 CCTTATACCATGACTTAAT---CCAAATACAATGAAAACCCCTTGGACTTAGACCTACAGAGAGGCAGTTTTGCTTTTTGTACCATAGCACACATAGTTGAAGCAAACATATTCCTTTAAACATAATACTCCTGCATAATAGAAAGTGTTCTCTGTTTTCTGGATG-AAAGGCACGAGGTCTTGTGCCTTTAGCAAGCTGAAATTGTTAGCTATAGAA-AGAGTCAA-------------AAATCAAAGGGGCTCTGG- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9752815 240 + 11631747 CCTTATAACATGACTTAAT---CCAAATACATTGAAAACCCTTCGGACTTAGACCTACAGAGAGGTGGTTTTGCTTTTTGTACCATAGCACACATAGTTGAAGCAAACATATTCCTTTAAACATAATACTCCTACATAATAGAAAGTGTTCTCTGTTTTCTGGATG-AAAGGCATGAGGTCTTGTGCCTTTAGCAAACTGAAATTGTTAACTATAGAA-AGAGTCAA-------------AAATCAAAGGGGCTCTAG- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21700816 244 - 63241923 -CCTGGGGCATAATTTAAT---CAAGATAAATTTAAAATCCCTTAGATTGAGA--------GATGTCGTCTTGTTTACCG-AAAATGCCACATGTAGTTGAAGCACTGACATCCCTTCTAAGACATTAGTTTTATATAACAGAAAATGTCTCCTGCTTCCTGGACAAAAGTGCATGAGGCCTCATG-TCCTATTAAGCTGAAAGCATGAGTTACAAAA-TGAATTAAAAAAACAAAAGGGAAATAAAAGGGGGCTTTAG i canFam3.chr13 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I a score=618875.000000 s hg38.chr9_KI270719v1_random 136732 79 + 176845 -CGTATTTATAAGGACCTTGAATGGCTCAGATTCATCAGGAAAAAAAAAAAACATTCCT----GAGAGTCTGATCTCAAGCTGA s panTro5.chr4 86967287 77 + 194502333 -TGCATTTATAAGGACATCAAATCAATCAGATTCATCAG----AAAAGAAAACATTCCTCA--GAGAGTCTGTTCTCAAGCTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743636 77 + 195804263 -TGCATTTATAAGGACATCAAATCAATCAGATTCATCAG----AAAAGAAAACATTCCTCA--GAGAGTCTGTTCTCAAGCTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 29944 79 + 36344 -CATATTTATAAGGACCTTGAATGGCTCAGATTCATCAGGA--AAAAAAAAACATTCCTCA--GAGAGTCTGATCTCAAGCTGA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537504 77 + 85365473 -TGCATTTATAAGGACATCAAATCAATCAGATTCATCAG----AAAAGAAAACATTCCTCA--GAGAGTCTGTTCTCAAGCTGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382462 77 - 190429646 -TGCATTTATAAGGACATCAAATCGATCAGATTCATCAG----AAAAGAAAACATTCCTCA--GAGAATCTGTTCTCAAGCTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144407906 77 - 189454096 -TGCATTTATAAGGACATCAAATCGATCAGATTCATCAG----AAAAGAAAACATTCCTCA--GAGAATCTGTTCTCAAGCTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521231 77 + 39453387 -TGCATTTATAAGGACATCAAATCGATCAGATTCATCAG----AAAAGAAAACATTCCTCA--GAGAATCTGTTCTCAAGCTAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143693 77 + 25348628 -TGCATTTATAAGGACATCAAATCGATCAGATTCATCAG----AAAAGAAAACATTCCTCA--GAGAGTCTGTTCTCAAGCTAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5153994 77 + 48547382 -TGCACTTATAAGGACATCAAATCGATCAGATTCATCAG----AAAAGAAAACATTCCTCA--GAGAGTCTGTTCTCAAGCTGA i chlSab2.chr27 C 0 C 0 s colAng1.NW_012120821v1 4195503 77 + 12320365 -TGCATTTATAAGGACATCAAATCGATCAGATTCATCAG----GAAAAAAAACATTCCTCA--GAGAGTCTGTTCTCAAGCTGA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145656854 76 + 190850796 -TGTATTTATAAGCACATCAAATTGCTTAGACTTACCAG----GAAAAAAAA-ATTCCTCA--GAGAGTCTGTACTCAAGCTGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567569 76 + 15139346 -TGTATTTATAAGCACATCAAATTTCTTAGACTTATCAG----AAAAAATAA-ATTCCTCA--GAGAATCTGTTCTCAAGCTGA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 393652 76 + 3802414 -TGTATTTATAAGCACATCAAATTGCTTAGACTTATCAG----AAAAAGTAA-ATTCCTCA--GAGAGTCTGTTCTCAAGCTGA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9753055 75 + 11631747 -TATATTTATAAGCACATTAAATTGCTTAGACTTACCAG----AAAAAA-AA-ATTCCTCA--GAGAGTCTGTTCTCAAGCTGA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21701060 80 - 63241923 TATTTTTTACAAGGACAGCAAATCTCTCAGATTCAGAAG----GGAAGAAAACATTCATTCATAACAGTCTGTTTTCAAGCGCT i canFam3.chr13 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I e manLeu1.NW_012102858v1 57156 3 + 130402 I a score=441526.000000 s hg38.chr9_KI270719v1_random 136811 39 + 176845 TGTTTCTTTATTGA-ATTTGATTCTAAACCATCA-TTTTGT s panTro5.chr4 86967364 40 + 194502333 TGTTTCTTCATTGA-ATTTGGTTCTAAACTACCATTTTTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743713 40 + 195804263 TGTTTCTTCATTGA-ATTTGGTTCTAAACTACCATTTTTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30023 40 + 36344 TGTTTCTTTATTGA-ATTTGATTCTAAACCATCATTTTTGT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537581 40 + 85365473 TGTTTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382539 40 - 190429646 TGTTTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144407983 40 - 189454096 TGTTTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521308 40 + 39453387 TGTTTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143770 40 + 25348628 TGTTTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154071 40 + 48547382 TGTTTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57159 40 + 130402 TGTTTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i manLeu1.NW_012102858v1 I 3 C 0 s colAng1.NW_012120821v1 4195580 40 + 12320365 TGTTTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145656930 40 + 190850796 TGTGTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567645 40 + 15139346 TGTGTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 393728 40 + 3802414 TGTGTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9753130 40 + 11631747 TGTGTCTTCATTGA-ATTTGATTCTAAACTACCATTTTTGT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21701140 41 - 63241923 TGTCTCATCACCCATATTTGGTTATGAACTGTCATTTCTGT i canFam3.chr13 C 0 C 0 e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I a score=259193.000000 s hg38.chr9_KI270719v1_random 136850 20 + 176845 TGAATCCTCTGTGCTTTCAG s panTro5.chr4 86967404 20 + 194502333 TGAATCCTCTGTGCTTTCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743753 20 + 195804263 TGAATCCTCTGTGCTTTCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30063 20 + 36344 TGAATCCTCTGTGCTTTCAG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537621 19 + 85365473 TGAAT-CTCTGTGCTTTCAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382579 20 - 190429646 TGAATCCTCTGTGCTTTCAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408023 20 - 189454096 TGAATCCTCTGTGCTTTCAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521348 20 + 39453387 TGAATCCTCTGTGCTTTCAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143810 20 + 25348628 TGAATCCTCTGTGCTTTCAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154111 20 + 48547382 TGAATCCTCTGTGCTTTCAG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57199 20 + 130402 TGAATCCTCTGTGCTTTCAA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4195620 20 + 12320365 TGAATCCTCTGTGCTTTCGG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145656970 20 + 190850796 TGAGTCCTCTGTGCTTTCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567685 20 + 15139346 TGTATCCTCCGTGCTTTCAG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 393768 20 + 3802414 TGAGTCCTCTGTGCTTTCAG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9753170 20 + 11631747 TGAGTCCTCTGTGCTTTCAG i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 56387 20 + 330844 TGAACACTCTGTACTTTCAG i eulMac1.LGHX01003138v1 N 0 I 6250 s eulFla1.LGHW01003172v1 57098 20 + 333214 TGAACACTCTGTACTTTCAG i eulFla1.LGHW01003172v1 N 0 I 6430 s canFam3.chr13 21701181 20 - 63241923 TGCACCTTTTGTTCTCTCGG i canFam3.chr13 C 0 I 2 e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I a score=84564.000000 s hg38.chr9_KI270719v1_random 136870 15 + 176845 AATGCTGA--AATGTA--A s panTro5.chr4 86967424 15 + 194502333 AATGCTGA--AATGTA--A i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743773 15 + 195804263 AATGCTGA--AATGTA--A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30083 15 + 36344 AATGCTGA--AATGTA--A i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537640 15 + 85365473 AATGCTGA--AATGTA--A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382599 15 - 190429646 AATAGTGA--AATTTA--A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408043 15 - 189454096 AATAGTGA--AATTTA--A i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521368 15 + 39453387 AATAGTGA--AATTTA--A i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143830 15 + 25348628 AATAATGA--AATTTA--A i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154131 15 + 48547382 AATACTGA--AATTTA--A i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57219 15 + 130402 AATAGTGA--AATTTA--A i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4195640 15 + 12320365 AATACTGA--AATTTA--A i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145656990 14 + 190850796 AATTCTGA--AATATA--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567705 14 + 15139346 AATTCTGa--aatata--- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 393788 15 + 3802414 AATTCTGA--AATATAA-- i cebCap1.NW_016107603v1 C 0 I 69 s aotNan1.NW_018493494v1 9753190 15 + 11631747 AATTCTGA--AATATA-A- i aotNan1.NW_018493494v1 C 0 I 22 s canFam3.chr13 21701203 17 - 63241923 AGTGGTGGCTAATATG--A i canFam3.chr13 I 2 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I a score=150777.000000 s hg38.chr9_KI270719v1_random 136885 27 + 176845 AATA-TTTTTAACTTATGAAAGAGATAA s panTro5.chr4 86967439 24 + 194502333 ATTA-TTTTTAATTTATGAAAGAGA--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743788 24 + 195804263 ATTA-TTTTTAATTTATGAAAGAGA--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30098 27 + 36344 AATA-TTTTTAACTTATGAAAGAGATAA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537655 24 + 85365473 ATTA-TTTTTAATTTATGAAAGAGA--- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382614 27 - 190429646 ATTA-TTTTTAATTTATGAAAGAGATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408058 27 - 189454096 ATTA-TTTTTAATTTATGAAAGAGATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521383 27 + 39453387 ATTA-TTTTTAATTTATGAAAGAGATTA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143845 27 + 25348628 ATTA-TTTTTAATTTATGAAAGAGATTA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154146 28 + 48547382 ATTATTTTTTAATTTATGAAAGAGATTA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57234 27 + 130402 ATTA-TTTTTAATTTATGAAAGAGATTA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4195655 28 + 12320365 ATTATTTTTTAATTTATGAAAGAGATTA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145657004 23 + 190850796 ATTT-TGTTTAATTTATGAGATTG---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567719 23 + 15139346 attt-tgtttaatttatgatattg---- i saiBol1.JH378162 C 0 C 0 s canFam3.chr13 21701220 25 - 63241923 ATTATTCTTTAATTTATAAAAGAGG--- i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I e aotNan1.NW_018493494v1 9753205 22 + 11631747 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I a score=154260.000000 s hg38.chr9_KI270719v1_random 136912 17 + 176845 TTTATTTTTATTTTCTC s panTro5.chr4 86967463 16 + 194502333 -TTATTTTTATTTTCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743812 16 + 195804263 -TTATTTTTATTTTCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30125 17 + 36344 TTTATTTTTATTTTCTC i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537679 16 + 85365473 -TTATTTTTATTTTCTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382641 17 - 190429646 TTTATTTTTATTTTCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408085 17 - 189454096 TTTATTTTTATTTTCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521410 17 + 39453387 TTTATTTTTATTTTCTC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143872 17 + 25348628 TGTATTTTTATTTTCTC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154174 17 + 48547382 TTTATTTTTGTTTTCTC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57261 17 + 130402 TTTATTTTTATTTTCTC i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4195683 17 + 12320365 TTTATTTTTATTTTCTC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145657027 17 + 190850796 TTTATTTTTATTTTCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567742 17 + 15139346 tttatttttattttatC i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9753227 17 + 11631747 TTTATTTTTATTTTATC i aotNan1.NW_018493494v1 I 22 C 0 s canFam3.chr13 21701245 14 - 63241923 -TTATCTTTCTTTTT-- i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I a score=50753.000000 s hg38.chr9_KI270719v1_random 136929 7 + 176845 CTATACA- s panTro5.chr4 86967479 7 + 194502333 CTATACA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743828 7 + 195804263 CTATACA- i panPan2.chr4 C 0 C 0 s nomLeu3.chr20 42537695 7 + 85365473 CTATACA- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382658 7 - 190429646 CTATACA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408102 7 - 189454096 CTATACA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521427 7 + 39453387 CTATACA- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143889 7 + 25348628 CTATACA- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154191 7 + 48547382 CTATACA- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57278 7 + 130402 CTATACA- i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4195700 7 + 12320365 CTATACA- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145657044 7 + 190850796 CTACACA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567759 7 + 15139346 CTATACA- i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9753244 7 + 11631747 CTATACA- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21701259 2 - 63241923 ------AA i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e gorGor5.CYUI01002260v1 30142 0 + 36344 C a score=9399.000000 s hg38.chr9_KI270719v1_random 136936 2 + 176845 -TT s panTro5.chr4 86967486 2 + 194502333 -TT i panTro5.chr4 C 0 I 1 s panPan2.chr4 87743835 2 + 195804263 -TT i panPan2.chr4 C 0 I 1 s nomLeu3.chr20 42537702 2 + 85365473 -TT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382665 2 - 190429646 -TT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 144408109 2 - 189454096 -TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521434 2 + 39453387 -TT i macNem1.NW_012011022v1 C 0 I 1 s cerAty1.NW_012002843v1 1143896 2 + 25348628 -TT i cerAty1.NW_012002843v1 C 0 I 1 s manLeu1.NW_012102858v1 57285 2 + 130402 -TT i manLeu1.NW_012102858v1 C 0 I 1 s colAng1.NW_012120821v1 4195707 2 + 12320365 -TT i colAng1.NW_012120821v1 C 0 I 1 s calJac3.chr3 145657051 2 + 190850796 -TT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567766 2 + 15139346 -TT i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9753251 2 + 11631747 -TT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21701261 2 - 63241923 GT- i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e chlSab2.chr27 5154198 0 + 48547382 C e gorGor5.CYUI01002260v1 30142 0 + 36344 C a score=-130.000000 s hg38.chr9_KI270719v1_random 136938 1 + 176845 T s nomLeu3.chr20 42537704 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144408111 1 - 189454096 G i macFas5.chr5 C 0 C 0 s calJac3.chr3 145657053 1 + 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567768 1 + 15139346 T i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9753253 1 + 11631747 T i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21701263 1 - 63241923 T i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87743837 1 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e colAng1.NW_012120821v1 4195709 1 + 12320365 I e manLeu1.NW_012102858v1 57287 1 + 130402 I e chlSab2.chr27 5154198 0 + 48547382 C e cerAty1.NW_012002843v1 1143898 1 + 25348628 I e macNem1.NW_012011022v1 3521436 1 + 39453387 I e rheMac8.chr5 145382667 1 - 190429646 I e gorGor5.CYUI01002260v1 30142 0 + 36344 C e panTro5.chr4 86967488 1 + 194502333 I a score=2730.000000 s hg38.chr9_KI270719v1_random 136939 3 + 176845 TTT s calJac3.chr3 145657054 3 + 190850796 TTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567769 3 + 15139346 TTT i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9753254 3 + 11631747 TTT i aotNan1.NW_018493494v1 C 0 I 18 s canFam3.chr13 21701264 3 - 63241923 TTT i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87743837 1 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e colAng1.NW_012120821v1 4195709 1 + 12320365 I e manLeu1.NW_012102858v1 57287 1 + 130402 I e chlSab2.chr27 5154198 0 + 48547382 C e cerAty1.NW_012002843v1 1143898 1 + 25348628 I e macNem1.NW_012011022v1 3521436 1 + 39453387 I e macFas5.chr5 144408112 0 - 189454096 C e rheMac8.chr5 145382667 1 - 190429646 I e nomLeu3.chr20 42537705 0 + 85365473 C e gorGor5.CYUI01002260v1 30142 0 + 36344 C e panTro5.chr4 86967488 1 + 194502333 I a score=91.000000 s hg38.chr9_KI270719v1_random 136942 1 + 176845 T s canFam3.chr13 21701267 1 - 63241923 T i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87743837 1 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 693411 1767 + 1045278 I e aotNan1.NW_018493494v1 9753257 18 + 11631747 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e saiBol1.JH378162 14567772 0 + 15139346 C e calJac3.chr3 145657057 0 + 190850796 C e colAng1.NW_012120821v1 4195709 1 + 12320365 I e manLeu1.NW_012102858v1 57287 1 + 130402 I e chlSab2.chr27 5154198 0 + 48547382 C e cerAty1.NW_012002843v1 1143898 1 + 25348628 I e macNem1.NW_012011022v1 3521436 1 + 39453387 I e macFas5.chr5 144408112 0 - 189454096 C e rheMac8.chr5 145382667 1 - 190429646 I e nomLeu3.chr20 42537705 0 + 85365473 C e gorGor5.CYUI01002260v1 30142 0 + 36344 C e panTro5.chr4 86967488 1 + 194502333 I a score=584.000000 s hg38.chr9_KI270719v1_random 136943 3 + 176845 TTC s tarSyr2.KE948818v1 695178 3 + 1045278 TTT i tarSyr2.KE948818v1 I 1767 C 0 s canFam3.chr13 21701268 3 - 63241923 TTC i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87743837 1 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e aotNan1.NW_018493494v1 9753257 18 + 11631747 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e saiBol1.JH378162 14567772 0 + 15139346 C e calJac3.chr3 145657057 0 + 190850796 C e colAng1.NW_012120821v1 4195709 1 + 12320365 I e manLeu1.NW_012102858v1 57287 1 + 130402 I e chlSab2.chr27 5154198 0 + 48547382 C e cerAty1.NW_012002843v1 1143898 1 + 25348628 I e macNem1.NW_012011022v1 3521436 1 + 39453387 I e macFas5.chr5 144408112 0 - 189454096 C e rheMac8.chr5 145382667 1 - 190429646 I e nomLeu3.chr20 42537705 0 + 85365473 C e gorGor5.CYUI01002260v1 30142 0 + 36344 C e panTro5.chr4 86967488 1 + 194502333 I a score=191.000000 s hg38.chr9_KI270719v1_random 136946 2 + 176845 TC s tarSyr2.KE948818v1 695181 2 + 1045278 TC i tarSyr2.KE948818v1 C 0 I 1240 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87743837 1 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e canFam3.chr13 21701271 0 - 63241923 C e aotNan1.NW_018493494v1 9753257 18 + 11631747 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e saiBol1.JH378162 14567772 0 + 15139346 C e calJac3.chr3 145657057 0 + 190850796 C e colAng1.NW_012120821v1 4195709 1 + 12320365 I e manLeu1.NW_012102858v1 57287 1 + 130402 I e chlSab2.chr27 5154198 0 + 48547382 C e cerAty1.NW_012002843v1 1143898 1 + 25348628 I e macNem1.NW_012011022v1 3521436 1 + 39453387 I e macFas5.chr5 144408112 0 - 189454096 C e rheMac8.chr5 145382667 1 - 190429646 I e nomLeu3.chr20 42537705 0 + 85365473 C e gorGor5.CYUI01002260v1 30142 0 + 36344 C e panTro5.chr4 86967488 1 + 194502333 I a score=0.000000 s hg38.chr9_KI270719v1_random 136948 1430 + 176845 AACATGGTATTTATTTACAtttttcttttattatactttaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctgcacccactaactcgtcatctagcattaggtatatctcccattgctatccctcccccctccccccaccccaccacagtccccagagtgtgatattccccttcctgtgtccatgtgatctcattgttcagttcccacctatgagtgagaatatgtggtgtttggttatttgttcttgcgatagtttactgagaatggtgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgttggacacttgggttggttccaagtctttgctattgtgaataatgccgcaataaacatatgtgtgcatgtgtctttatagcagcatgatttatagtcatttgggtatatacgcagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatcgccacactgacttccaccatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgatatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtccttcgcccactttttgatggggttgtttgtttttttcttgtaaatttgtttgagttcattgtagattctggatattagccatttgtcagatgagtaggttgcaaaaattttctcccattttgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttgtcttttgttgccattgcttttggtgttttggacatgaagtccgtgcccatgcctatgtcctgaacggtaatgcctaggttttcttctagggtttttatggttttaggtctaacatttaaatctttaatccatcttgaattgatttttgtataaggtgtaaggaagggatccagtttcagctttctacatacggctagccagttttcccagcaccatttattaaatagggaatcctttccccattgcttgtttttctcaggtttgtcaaagatcagatagttgtagatatgcggcgttatttctgagggctctgttctgttccattgatctatatctctgttttggtaccagtaccatgctgttttggttactgtagccttgtCTT e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87743837 1 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e canFam3.chr13 21701271 0 - 63241923 C e aotNan1.NW_018493494v1 9753257 18 + 11631747 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e saiBol1.JH378162 14567772 0 + 15139346 C e calJac3.chr3 145657057 0 + 190850796 C e colAng1.NW_012120821v1 4195709 1 + 12320365 I e manLeu1.NW_012102858v1 57287 1 + 130402 I e chlSab2.chr27 5154198 0 + 48547382 C e cerAty1.NW_012002843v1 1143898 1 + 25348628 I e macNem1.NW_012011022v1 3521436 1 + 39453387 I e macFas5.chr5 144408112 0 - 189454096 C e rheMac8.chr5 145382667 1 - 190429646 I e nomLeu3.chr20 42537705 0 + 85365473 C e gorGor5.CYUI01002260v1 30142 0 + 36344 C e panTro5.chr4 86967488 1 + 194502333 I a score=837.000000 s hg38.chr9_KI270719v1_random 138378 9 + 176845 CTATACATT s gorGor5.CYUI01002260v1 30142 9 + 36344 CTATACATT i gorGor5.CYUI01002260v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87743837 1 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e canFam3.chr13 21701271 0 - 63241923 C e aotNan1.NW_018493494v1 9753257 18 + 11631747 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e saiBol1.JH378162 14567772 0 + 15139346 C e calJac3.chr3 145657057 0 + 190850796 C e colAng1.NW_012120821v1 4195709 1 + 12320365 I e manLeu1.NW_012102858v1 57287 1 + 130402 I e chlSab2.chr27 5154198 0 + 48547382 C e cerAty1.NW_012002843v1 1143898 1 + 25348628 I e macNem1.NW_012011022v1 3521436 1 + 39453387 I e macFas5.chr5 144408112 0 - 189454096 C e rheMac8.chr5 145382667 1 - 190429646 I e nomLeu3.chr20 42537705 0 + 85365473 C e panTro5.chr4 86967488 1 + 194502333 I a score=6006.000000 s hg38.chr9_KI270719v1_random 138387 1 + 176845 T s panTro5.chr4 86967489 1 + 194502333 T i panTro5.chr4 I 1 C 0 s panPan2.chr4 87743838 1 + 195804263 T i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01002260v1 30151 1 + 36344 T i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537705 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382668 1 - 190429646 T i rheMac8.chr5 I 1 C 0 s macFas5.chr5 144408112 1 - 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521437 1 + 39453387 T i macNem1.NW_012011022v1 I 1 C 0 s cerAty1.NW_012002843v1 1143899 1 + 25348628 T i cerAty1.NW_012002843v1 I 1 C 0 s manLeu1.NW_012102858v1 57288 1 + 130402 T i manLeu1.NW_012102858v1 I 1 C 0 s colAng1.NW_012120821v1 4195710 1 + 12320365 T i colAng1.NW_012120821v1 I 1 C 0 s canFam3.chr13 21701271 1 - 63241923 T i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e aotNan1.NW_018493494v1 9753257 18 + 11631747 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e saiBol1.JH378162 14567772 0 + 15139346 C e calJac3.chr3 145657057 0 + 190850796 C e chlSab2.chr27 5154198 0 + 48547382 C a score=14196.000000 s hg38.chr9_KI270719v1_random 138388 2 + 176845 TT s panTro5.chr4 86967490 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743839 2 + 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30152 2 + 36344 TT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537706 2 + 85365473 TT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382669 2 - 190429646 TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408113 2 - 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521438 2 + 39453387 TT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143900 2 + 25348628 TT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154198 2 + 48547382 TT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57289 2 + 130402 TT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4195711 2 + 12320365 TT i colAng1.NW_012120821v1 C 0 C 0 s canFam3.chr13 21701272 2 - 63241923 TT i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e aotNan1.NW_018493494v1 9753257 18 + 11631747 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I e saiBol1.JH378162 14567772 0 + 15139346 C e calJac3.chr3 145657057 0 + 190850796 C a score=161704.000000 s hg38.chr9_KI270719v1_random 138390 25 + 176845 AAGTAGTACCTTAAAAACTAGACAA s panTro5.chr4 86967492 25 + 194502333 AAGTAGCACCTTAAAAAATAGACAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743841 25 + 195804263 AAGTAGCACCTTAAAAAATAGACAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30154 25 + 36344 AAGTAGCACCTTAAAAAGTAGACAA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537708 25 + 85365473 AGGTAGCACCTTAAAAAATAGACAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382671 25 - 190429646 AAGTAGCACCTTAAAAAATAGACAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408115 25 - 189454096 AAGTAGCACCTTAAAAAATAGACAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521440 25 + 39453387 AAGTAGCACCTTAAAAAATAGACAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143902 25 + 25348628 AAGAAGCACCTTAAAAAATAGACAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154200 25 + 48547382 AAGTAGCACCTTAAAAAATAGATAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57291 25 + 130402 AAGTAGCACCTTAAAAAATAGACAA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4195713 25 + 12320365 AAGTAGCACCTTTAAACATAGACAA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145657057 21 + 190850796 AATTACTACCTTAAAAAATAG---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567772 21 + 15139346 AATTACTACCTTAAAAAATAG---- i saiBol1.JH378162 C 0 C 0 s canFam3.chr13 21701274 19 - 63241923 CTGTAGCACTTAAAAAAAA------ i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e aotNan1.NW_018493494v1 9753257 18 + 11631747 I e cebCap1.NW_016107603v1 393803 69 + 3802414 I a score=3001628.000000 s hg38.chr9_KI270719v1_random 138415 321 + 176845 AT-CCATACAGGGTCAAAAGAACT---CAACTGAATTCTCTATCACTGTGAAAATAGACTTAGTTCTTCATTACAAAAGCACTAC----AATAACTACAAAAATTATATCTCCTGGAGTATAT---ATTTACATATCCATGCAAAAGGGGAATAGATTAAAAGATGTTTATGAATGTCTAAAACCTTAA-GTCAGTTTAAGTTTAACGTAGTATTATAAATCAGGTTTGTGGGTGATA-TTTTGTCTGCTTCTAG-ACTTGTGAGCAAGTTATTAAG--------TTTTAGGTTACTTATATTTAAAATTC-AAAAAGGAAATGATTGTGATTGCATTC----------AAAGA s panTro5.chr4 86967517 314 + 194502333 AT-CCATCCAGAGTCAAGAGAACT---CAACTCAATTCTCTATCACTGTGAAAATAGACTATGTTCTTCATTACAAAAGCACTAC----AATAACTACAAAAATTATACCTCCTGGAGTATATGATATTTACATATCCTTGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTCAGTTTAA------CATAGTATTATAAATCAGGTTTGTGGGTGATA-TTTTGCCTGCTTCTAG-ACTTGTGAGCAAGTTATT------------TTTAGGTTTCTTATATTTAAAATTC-AGAAAGGAAATGATGGGGATTGCACTC----------AAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87743866 314 + 195804263 AT-CCATCCAGAGTCAAGAGAACT---CAACTCAATTCTCTATCACTGTGAAAATAGACTATGTTCTTCATTACAAAAGCACTAC----AATAACTACAAAAATTATACCTCCTGGAGTATATGATATTTACATATCCTTGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTCAGTTTAA------CATAGTATTATAAATCAGGTTTATGGGTGATA-TTTTGCCTGCTTCTAG-ACTTGTGAGCAAGTTATT------------TTTAGGTTTCTTATATTTAAAATTC-AGAAAGGAAATGATGGGGATTGCACTC----------AAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30179 311 + 36344 AT-CCATCCAGGGTCAAAAGAACT---CAACTCAATTCTCTATCACTGTGAAAATAGACTTCGTTCTTCATTACAAAAGCACTAC----AATAACTACAAAAATTATACCTCCTGGAGTATAT---ATTTACATATCCATGCAAAAGGGGAATAGATTAAAAGATGTTTATGAATGTCTAAAACCTTAA-GTCAGTTTAA------CGTAGTATTATAAATCAGGTTTGTGGGTGATA-TTTTGTCTGCTTCTAG-ACTTGTGAGCAAGTTATT------------TTTAGGTTACTTATATTTAAAATTC-AAAAAGGAAATGATTGTGATTGCATTC----------AAAGA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42537733 316 + 85365473 AT-CCATCCAGAGTCAAGAGAACT---CAACTCAATTCTCTATCACTGTGAAAATAGACTGTGTTCTTCATTATAAAAGCACTAC----AATAACTACAAAAATTAGACCTCCTGGAGTATATGATATTTACATATCCATGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTCAGTTTAA------CATAGTA--ATAAATCAGGTTTGTGGATGATA-TTTTGCCTGCCTCTAG-ACTTGTGAGCAAGTTATTAAG--------TTTTAGGTTTCTTATATTTAAAATTC-AGAAAGGAAATGATTGGCATTGCAATC----------GAAGA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145382696 318 - 190429646 AT-CCATCCAGAGTCAAGATAACT---CAACACAATTCCCTATCACTGTGAAAATAGACTATGTTCTTCATTACAAAAGCACTAT----AATAGCTATAAAAATTATACCTCCTGGAGTATATGATATTTACATATCCATGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTAAGTTTAA------CATAGTACTATAAATCAGGTTTGTGGGTGATA-TTTTGCTAGCTTCTAG-ACTTGTGAGCAAGATATTAAG--------TTTTAGGTTTCTTATATTTAAAATTA-AGAAAGGAAATGATTGGGTTTGCATTC----------AAAGA i rheMac8.chr5 C 0 I 30 s macFas5.chr5 144408140 314 - 189454096 AT-CCATCCAGAGTCAAGATAACT---CAACACAATTCCCTATCACTGTGAAAATAGACTATGTTCTTCATTACAAAAGCACTAT----AATAGCTATAAAAATTATACCTCCTGGAGTATATGATATTTACATATCCATGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTAAGTTTAA------CATAGTACTATAAATCAGGTTTGTGGGTGATA-TTTTGCTAGCTTCTAG-ACTTGTGAGCAAGATATTAAG--------TTTTAGGTTTCTTATATTTAAAATTA-AGAAAGGAAATGATTGGGTTTGCATTC----------A---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521465 313 + 39453387 AT--CATCCAGAGTCAAGATAACT---CAACACAATTCCCTATCACTGTGAAAATAGACTATGTTCTTCATTACAAAAGCACTAT----AATAGCTATAAAAATTATACCTCCTGGAGTATATGATATTTACATATCCATGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTAAGTTTAA------CATAGTACTATAAATCAGGTTTGTGGGTGATA-TTTTGCTAGCTTCTAG-ACTTGTGAGCAAGATATTAAG--------TTTTAGGTTTCTTATATTTAAAATTA-AGAAAGGAAATGATTGGGTTTGCATTC----------A---- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1143927 326 + 25348628 AT-CCATCCAGAGTCAAGATAACT---CAACACAATTCCCTATCACTGTGAAAATAGACTATGTTCTTCATTACAAAAGCACTAT----AATAGCTATAAAAATTATACCTTCTGGAGTATATGATATTTACATATCCATGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTAAGTTTAA------CATAGTACTATAAATCTGATTTGTGGGTGATA-TTTTGCTAGCTTCTAG-ACTTGTGAGCAAGATATTAAGTTTTAGGTTTTTAGGTTTCTTATATTTAAAATTA-AGAAAGGAAATGATTGGGTTTGCATTC----------AAAGA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154225 322 + 48547382 AT-CCATCCAGAGTCAAGATAACT---CAACACAATTCCC--TCACTGTGAAAATAGACTGTGTTCTTCATTACAAAAGCACTAT----AATAGCTACAAAAATTATACCTCCTGGAGTATATGATATTTACATATCCATGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTCAGTTTAA------CATAGTACTATAAATCAGGTTTGTGGGTGATA-TTTTGCTAGCTTCTAG-ACTTGTGAGCAAGATATTAAG--------TTTTAGATTTCTTATATTTAAAATTA-AGAAAGGAAATGATTGGATTTGCATTCAAAGAAAGAGA---- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57316 314 + 130402 AT-CCATCCAGAGTCAAGATAACT---CAACACAATTCCCTATCACTGTGAAAATAGACTATGTTCTTCATTACAAAAGCACTAT----AATAGCTATAAAAATTATACCTCCTGGAGTATATGATATTTACATATCCATGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTAAGTTTAA------CATAGTACTATAAATCAGGTTTGTGGGTGATA-TTTTGCTAGCTTCTAG-ACTTGTGAGCAAGATATTAAG--------TTTTAGGTTTCTTATATTTAAAATTA-AGAAAGGAAATGATTGGGTTTGCATTC----------A---- i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4195738 318 + 12320365 AT-CCATCCAGAGTCAAGTTAACT---CAACACAATTCCCTATCACTGTGAAAATAGACTATGTTCTTCATTACCAAAGCACTAT----AATAGCTATAAAAATTATACCTCCTGGAGTATATGATATTTACATATCCATGCAAAAGGGGAATAGATTAAAATATGTTTATAAATGTCTAAAACCTTAA-GTCAGTTTAA------CATAGCATTATAAATCAGGTTTGTGGGTGATA-TTTTGCCAGCTTCTAG-ACTTGTGAGCAAGTTATTAAG--------TTTTAGGTTTCTTATATTTAAAATTA-AGAAAGGAAATGATTGGATTTGCATTC----------AAAGA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145657078 310 + 190850796 AT-CTATCCAGGGTCAAGACACCT---CAACTCAATTCTCTATCACTGTAAAAATAGATT-TGTTCTTTCTTACGAAAGCACTGC----AATAACTACAAAAATTATACCTTCTGGCATACATGATATTTACATGTCCATGCAACAGGGG----GATTAAAAGATATTTATAAATACCTAAAACCTTAA-GTTAGTTTAA------GATAG---TATAAATCAGGTTTGTAGGCGAGA-TTTTATCTGGTTGTAG-ACTTGTGAGCAATTTATTAAG--------TTTTAGGTTACTTATATTTAAAATTC-AGAAAAGAAACGATTGCAATTGCTTTC----------AAAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14567793 313 + 15139346 AT-CCATCCAGGGTCAAGACACCT---CAACTCAATTCTCTATCACTGTAAAAACAGATT-TGTTCTTTCTTACAAGAACACTGC----AATAACTATAAAAATTATACCTTCTGGTACACATGATATTTACAAATCCATGAAACAGGGG----GATTGAAAGATATTTATACATGCCTAAAACCTTAA-GTCAGTTTAA------CATAGTATTATAAATCAGGTTTGTGGCTGAGA-ATTTACCTGGTTCTGA-ACTTGTGAGCAAGTTATTAAG--------TTTTAGGTTACTTATATTTAAAATTC-AAAAAAGAAATGATTGCAACTGCTTTC----------AAGGA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 393872 313 + 3802414 AT-CCATACAGGGTCAAGACACCT---CAACTCAATTCTCTATCACTGTAAAAATAGATT-TGTTCTTTCTTACAAAAGCATTGC----AATAACTACAAAAATTATACCTTCTGGCATACATGATATTTACATATCCATGCAACAGGGG----GATTAAAAGATATTTATAAATGCCTAAAACCTTAA-GTCAGTTTAA------CGTAGTATTATAAATCAGGTTTGTGGGTGAGA-TTTTACCTGGTTCTAG-ACTTGTGAGCAAGTTATTAAG--------TTTTAGGTTACTTATATTTAAAATTC-AGAAAAGAAATGATTGCAATTGCTTTC----------AAAGA i cebCap1.NW_016107603v1 I 69 C 0 s aotNan1.NW_018493494v1 9753275 311 + 11631747 AT-CCATCCAGGGTCAAGACACCT---TAACTCAATTCTCTATCACTGTAAAAATAGATT-TGTTCTTTCTTACAAAAGCACTGC----AATAACTACAAAAATTATACCTTCTAGCATACATGATATTTACATATCCATGAAACAGGGG----GATTAAAAGATATTTATAAATACCTAAAACCTTAA-GTCAGTTTAA------CATAGTATTATAAATCAGGTTTGTGG--GAGA-TTTTACCTGGTTCTAG-ACTTGTGAGCAAGTGATTAAG--------TTTTAGGTTACTTATATTTAAAATTC-AGAAAAGAAATGATTGCAATTGCTTTC----------AAAGA i aotNan1.NW_018493494v1 I 18 C 0 s canFam3.chr13 21701293 327 - 63241923 ATACCATTGAGAGTCAAGAGAACTTTCCACCTCTATTCTC-ATGACTGTCAAAATATATTCTGTTCTTCTTTACAATAGCATTACACCAAACAACTATCAACATTCTTCCTCCAATTGTACACAATATATTCATATCCATGCAGAATGGGAATAAGTTAAAAGTCGTTTCCAAATGCCTAAAATCTTGACGTCAATGTAA------C--AGCTATATGAATCAGATTTGTGGGTGAGATTTTTACCTGGTTCCAGAAATGGTGAGCAAGTTAGTGAT--------TCTTAGGTTCCTCATATTTAAAATTAGAAAAAGAAAATGAATAAAACCGTTTTC----------ACAGA i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I a score=152854.000000 s hg38.chr9_KI270719v1_random 138736 33 + 176845 AAGAGAGGATATTTTGAAGCTTC-TTTTT--T-TTTA s panTro5.chr4 86967831 31 + 194502333 AAGGG--GACATTTCAAAACTTC-TTTTT--T-TTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87744180 30 + 195804263 AAGGG--GACATTTCAAAACTTC-TTTTT--T-TTT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30490 32 + 36344 AAGAGAGGACATTTTGAAGCTTC-TTTTT--T-TTA- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538049 31 + 85365473 AAGAGAGGACATTTCAAAACTTC-TTTTT--T-TT-- i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144408454 32 - 189454096 AAGAGAGGACATTTCGAAACTTC-TTTTT--TAAA-- i macFas5.chr5 C 0 I 2 s macNem1.NW_012011022v1 3521778 31 + 39453387 AAGAGAGGACATTTCGAAACTTC-TTTTT--T-AA-- i macNem1.NW_012011022v1 C 0 I 2 s cerAty1.NW_012002843v1 1144253 27 + 25348628 ----GAGGACATTTTGAAACTTC-TTTTT--T-AA-- i cerAty1.NW_012002843v1 C 0 I 2 s chlSab2.chr27 5154547 32 + 48547382 AAGAGAGGACATTTCAAAACTTCTTTTTT--T-AA-- i chlSab2.chr27 C 0 I 2 s manLeu1.NW_012102858v1 57630 31 + 130402 AAGAGAGGACATTTTGAAACTTC-TTTTT--T-AA-- i manLeu1.NW_012102858v1 C 0 I 2 s colAng1.NW_012120821v1 4196056 31 + 12320365 AAGAGAGAACATTTCAAAACTTC-TTTTTTT---A-- i colAng1.NW_012120821v1 C 0 I 3 s calJac3.chr3 145657388 31 + 190850796 AAGAGAGGACATTTTGTAATTTC-TTTTT--G-TT-- i calJac3.chr3 C 0 I 2 s saiBol1.JH378162 14568106 32 + 15139346 AAGAGAGGATATTTTGTAATTTCTTTTTT--T-TT-- i saiBol1.JH378162 C 0 I 2 s cebCap1.NW_016107603v1 394185 31 + 3802414 AAGAGAGGACATTTTGTAATTTC-TTTTT--T-TT-- i cebCap1.NW_016107603v1 C 0 I 2 s aotNan1.NW_018493494v1 9753586 31 + 11631747 AAGAGAGGATATTTTGTAATTTC-TTTTT--T-TT-- i aotNan1.NW_018493494v1 C 0 I 2 s canFam3.chr13 21701620 29 - 63241923 AAGAAGCAAAGGTTTGCAGCATT-TTTTC--A----- i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e rheMac8.chr5 145383014 30 - 190429646 I a score=-3776.000000 s hg38.chr9_KI270719v1_random 138769 1 + 176845 -C s panTro5.chr4 86967862 1 + 194502333 -A i panTro5.chr4 C 0 C 0 s panPan2.chr4 87744210 1 + 195804263 -A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30522 1 + 36344 -C i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538080 1 + 85365473 -A i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144408488 1 - 189454096 -A i macFas5.chr5 I 2 C 0 s macNem1.NW_012011022v1 3521811 1 + 39453387 -A i macNem1.NW_012011022v1 I 2 C 0 s cerAty1.NW_012002843v1 1144282 1 + 25348628 -A i cerAty1.NW_012002843v1 I 2 C 0 s chlSab2.chr27 5154581 1 + 48547382 -a i chlSab2.chr27 I 2 C 0 s manLeu1.NW_012102858v1 57663 1 + 130402 -A i manLeu1.NW_012102858v1 I 2 C 0 s canFam3.chr13 21701649 1 - 63241923 C- i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e aotNan1.NW_018493494v1 9753617 2 + 11631747 I e cebCap1.NW_016107603v1 394216 2 + 3802414 I e saiBol1.JH378162 14568138 2 + 15139346 I e calJac3.chr3 145657419 2 + 190850796 I e colAng1.NW_012120821v1 4196087 3 + 12320365 I e rheMac8.chr5 145383014 30 - 190429646 I a score=1560.000000 s hg38.chr9_KI270719v1_random 138770 1 + 176845 T s panTro5.chr4 86967863 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 87744211 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30523 1 + 36344 T i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538081 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s calJac3.chr3 145657421 1 + 190850796 T i calJac3.chr3 I 2 C 0 s saiBol1.JH378162 14568140 1 + 15139346 T i saiBol1.JH378162 I 2 C 0 s cebCap1.NW_016107603v1 394218 1 + 3802414 T i cebCap1.NW_016107603v1 I 2 C 0 s aotNan1.NW_018493494v1 9753619 1 + 11631747 T i aotNan1.NW_018493494v1 I 2 C 0 s canFam3.chr13 21701650 1 - 63241923 T i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e colAng1.NW_012120821v1 4196087 3 + 12320365 I e manLeu1.NW_012102858v1 57664 0 + 130402 C e chlSab2.chr27 5154582 0 + 48547382 C e cerAty1.NW_012002843v1 1144283 0 + 25348628 C e macNem1.NW_012011022v1 3521812 0 + 39453387 C e macFas5.chr5 144408489 0 - 189454096 C e rheMac8.chr5 145383014 30 - 190429646 I a score=1251520.000000 s hg38.chr9_KI270719v1_random 138771 125 + 176845 AATATCAAAACATAA-------TATCACATTTGTAAAACACGTTGATGGCTTACAACCAAGTAAAATACCTCAATAC-CCCACTTTTCAAGATCAGTAATATT-GGCCTAT----------------GAGTATCCCTCTATAGGAATTAT-------- s panTro5.chr4 86967864 125 + 194502333 AATATCAAAACATAA-------CATCACATATGTAAAATGGGTTTGTGGCTTACAACCAAGTAAAATACCTCAATAC-CCCACTTTTCAAGATAAGTAATATT-GGCCTAA----------------GAGTATCAGTCTACAGGAATAAT-------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87744212 125 + 195804263 AATATCAAAACATAA-------CATCACATATGTAAAATGGGTTTGTGGCTTACAACCAAGTAAAATACCTCAATAC-CCCACTTTTCAAGATAAGTAATATT-GGCCTAA----------------GAGTATCAGTCTACAGGAATAAT-------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30524 125 + 36344 AATATCAAAACATAA-------TATCACATTTGTAAAACACGTTGATGGCTTACAACCAAGTAAAATACCTCAATAC-CCCACTTTTCAAGATCAGTAATATT-GGCCTAA----------------GAGTATCACTCTATAGGAATTAT-------- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538082 125 + 85365473 AATATCAAAACATAA-------CATCACATATGTAAAATGGGTTTATGGCTTACAGCCAAGTAAAATACCTCAATAC-CCCACTTTTCAAGATCAGTAATATT-GGCCTAA----------------GAGTATCAGTCTACAGGAATTAT-------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145383044 125 - 190429646 AATATCAAAACATAA-------CATCACATATGTAAAATGGGTTGATGGCTTACGACCAAGTAAAATATCTCAATAC-CCCACTTTTCAAGATCAGTAACATT-GGCCTAA----------------GAGTATCAGTCTACAGGAATTAT-------- i rheMac8.chr5 I 30 C 0 s macFas5.chr5 144408489 125 - 189454096 AATATCAAAACATAA-------CATCACATATGTAAAATGGGTTGATGGCTTACGACCAAGTAAAATATCTCAATAC-CCCACTTTTCAAGATCAGTAACATT-GGCCTAA----------------GAGTATCAGTCTACAGAAATTAT-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521812 125 + 39453387 AATATCAAAACATAA-------CATCACATATGTAAAATGGGTTGATGGCTTACGACCAAGTAAAATATCTCAATAC-CCCACTTTTCAAGATCAGTAACATT-GGCCTAA----------------GAGTATCAGTCTACAGGAATTAT-------- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1144283 125 + 25348628 AATATCAAAACATAA-------CATCACATATGTAAAATGGGTTGATGGCTTACGACCAAGTAAAATATCTCAATAC-CCCACTTTTCAAGATCAGTAACATT-GGCCTAA----------------AAGTATCAGTCTACAGGAATTAT-------- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154582 125 + 48547382 aatatcaaaacataa-------catcacatacgtaaaatGGGTTGATGGCTTACGACCAAGTAAAATATCTCAATAC-CCCACTTTTCAAGATCAGTAACATT-GGCCTAA----------------GAGTATCAGTCTACAGGAATTAT-------- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57664 125 + 130402 AATATCAAAACATAA-------CATCACATATGTAAAATGGGTTGATGGCTTATGACCAAGTAAAATATCTCAATAC-CCCACTTTTCAAGATCAGTAACATT-GGCCTAA----------------GAGTATCAGTCTACAGGAATTAT-------- i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4196090 125 + 12320365 AATATCAAACCATAA-------CATCACATATGTAAAATGGGTTGATGGCTTATGACCAAGTAAAATATCTCAATAC-CCCACTTTTCAAGATCAGTAACATT-GGCCTAA----------------GAGTATCAGTCTACAGGAATTAT-------- i colAng1.NW_012120821v1 I 3 C 0 s calJac3.chr3 145657422 132 + 190850796 AATATCAAAACATAATATCACATATCACATATGTGAAATGGGTTGGTGGCTCACGATCAAGTAAAATACTTCAGTAT-CCCACTTGTCAAAATCAGTAATATT-GGCCTAA----------------GAGTATCAGTCCACAGGAATTAT-------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14568141 132 + 15139346 AATATCAAAACATAATATCACGTATCACATATGTGAAATTGGTTGATGGCTCACGACCAAGTAAAATACTTCAATAT-CTCACTTATCAAAATCAGTAATGTT-GGCCTAA----------------GAGTATCAGTCTACGGGAATTGT-------- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 394219 132 + 3802414 GATATCAAAACATAATATCACATATCACATATGTGAAATGGGTTGATGGCTCATGGCCAAGTAAAATACCTCAACAT-CCCTCTTGTCAAAATCAGTAATGTT-GGCCTAA----------------GAGTATCAGTCTACAGGAATTAT-------- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9753620 132 + 11631747 AATATCAAAACATAATATAACATATCACATATGTGAAATGGGTTGATGGCTTACGACCAAGTAAAATACCTCAATAT-CCCACTTGTCAAAATCAGTAATATT-GGCCTAA----------------GAGTATCAGTCTACAGGAATTAT-------- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21701651 141 - 63241923 AATATCA----GTAG-------CATCACATGTGTGAACTGCGTTGATGGTTTAAGACC------AATATCCTGATTCATCCTCTTTGTAAAAATGGTAACATTAGGCTTAATGGTAACATTAGACTTGAGTATTATTCAAAATGAATTATTAAAAAAT i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 75737 5305 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I a score=10285.000000 s hg38.chr9_KI270719v1_random 138896 1 + 176845 A s panTro5.chr4 86967989 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 87744337 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30649 1 + 36344 A i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538207 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145383169 1 - 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408614 1 - 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521937 1 + 39453387 A i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1144408 1 + 25348628 A i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154707 1 + 48547382 A i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57789 1 + 130402 A i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4196215 1 + 12320365 A i colAng1.NW_012120821v1 C 0 I 1 s rhiBie1.NW_016814732v1 81042 1 + 665040 A i rhiBie1.NW_016814732v1 I 5305 I 2505 s calJac3.chr3 145657554 1 + 190850796 A i calJac3.chr3 C 0 I 1 s saiBol1.JH378162 14568273 1 + 15139346 A i saiBol1.JH378162 C 0 I 1 s cebCap1.NW_016107603v1 394351 1 + 3802414 T i cebCap1.NW_016107603v1 C 0 I 1 s aotNan1.NW_018493494v1 9753752 1 + 11631747 A i aotNan1.NW_018493494v1 C 0 I 1 s canFam3.chr13 21701792 1 - 63241923 A i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I a score=238568.000000 s hg38.chr9_KI270719v1_random 138897 23 + 176845 AAAAGTTGTATTTATGCCCTGAG s panTro5.chr4 86967990 23 + 194502333 AAAAGTTGTATTTATACCCTGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87744338 23 + 195804263 AAAAGTTGTATTTATACCCTGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30650 23 + 36344 AAAAGTTGTATTTATGCCCTGAG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538208 23 + 85365473 AAAAGTTGTATTTATACCCTGAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145383170 23 - 190429646 AAAAGTTGTATTTATACCCTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408615 23 - 189454096 AAAAGTTGTATTTATACCCTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521938 23 + 39453387 AAAAGTAGTATTTATACCCTGAG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1144409 23 + 25348628 AAAAGTTGTATTTATACCCTGAG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154708 23 + 48547382 AAAAGTTGTATTTATACCCTGAG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57790 23 + 130402 AAAAGTTGTATTTATACCCTGAG i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4196217 23 + 12320365 AAAAGTTGTATTTATACCCTGAG i colAng1.NW_012120821v1 I 1 C 0 s calJac3.chr3 145657556 23 + 190850796 AGAAGTTGCATTCAAACCTTGAG i calJac3.chr3 I 1 C 0 s saiBol1.JH378162 14568275 22 + 15139346 A-AAGTTTTATTCATACCCTGAG i saiBol1.JH378162 I 1 C 0 s cebCap1.NW_016107603v1 394353 23 + 3802414 AAAAGTTGTATTCATACCCTCAA i cebCap1.NW_016107603v1 I 1 I 7 s aotNan1.NW_018493494v1 9753754 23 + 11631747 AAAAGTTGTATTCATACCCTGAG i aotNan1.NW_018493494v1 I 1 C 0 s canFam3.chr13 21701793 23 - 63241923 AACAACTGTACTTACACACTGAG i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I a score=69462.000000 s hg38.chr9_KI270719v1_random 138920 16 + 176845 ATTATACCCTATAATG s panTro5.chr4 86968013 16 + 194502333 GTTATACCCTATAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87744361 16 + 195804263 GTTATACCCTATAATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30673 16 + 36344 ATTATACCCTATAATG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538231 16 + 85365473 ATTATACCCTATAATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145383193 16 - 190429646 ATTATACCCTATAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408638 16 - 189454096 ATTATACCCTATAATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521961 16 + 39453387 ATTATACCCTATAATG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1144432 16 + 25348628 ATTATACCCTATAATG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154731 16 + 48547382 ATTATACCCCATAATG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57813 16 + 130402 ATTATACCCTATAATG i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4196240 16 + 12320365 ATTATACCCTATAATG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145657579 7 + 190850796 ---ACATCTA------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14568297 7 + 15139346 ---ACATTTG------ i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9753777 7 + 11631747 ---ACATCTG------ i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21701816 7 - 63241923 ---ACATCTT------ i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e cebCap1.NW_016107603v1 394376 7 + 3802414 I a score=6189981.000000 s hg38.chr9_KI270719v1_random 138936 589 + 176845 TGCAAACTTTATAGGATAGACAAGTGGATATAAGGTTTCTTTCTAGGTTTCCTTATATACTC-CAAATGGTAAAACTAGATGGAAGA--------------TTAAAATTCCAAATGTTGTTAATTTTAGAACCTTCAATGTCAGAGTTActttgtatgaatgaatttacctaattttccacactatgcatgtctaatagatatta-------------ccattgcacaggtgagaaaactgcatctctgattattattattcactctagtcacagagataagaaagggcaaaatatcataatagaagcccaaataagtcttattttaatggaata----tt-tttccactggacTTCAACTGG-TTTATCTTA--------------TTTATCCGTCCATCTAAGATCAGTTGAAAAAAGAGACTTGCAGATGCAATATTTTAGCCAAtatatccaatctcctatttgaaatctcctgcatatctaacagaaaactcaaatttagtatgtctgaaatcaagctgactgctgcacgtgttc------------acactgaaacaaagcaaaacaaaattccttcaacagcttttctcatctcaataaatggtactacactgtgcctgtatgactcatgcccaaaacctag s panTro5.chr4 86968029 604 + 194502333 TGCAAACATTATAGGACAGACAAATGGATATAAGGTTTCTTTCTGTGTTTCCTTATGTCTTC-AAAATGGGAAAACTAGATGGAAGACAATTCATATTTATTTAGAATTCTAAATGATGTTAATTTTAGAACCTTCAATGTCAGAGTTACTGTGTATGAATAAGTTTACCTAATTTTCCACACTATGCATATCTAATAGAtatta-------------ctattgcacagatgagaaaactgcatctctgattattattattcattctagtcacagagataagaaagggcaaaatatcacaatataagcccaaatagttcttagtttaatggaata----ttctttccactggacttcaACttg-tttatctta--------------tttatctattcatttaAGATCAGTTGAAAAAAGAGATTTGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgggtatctaacagaaaactcaaatttagtatgtctgaattcaagctcactgctgcacatgttc------------acactgaaacaaagcaaaacaaaattccttcaatagattttctcatctcaataaatggcactacactgtgcctgcgtgactcatgtccaaaacctag i panTro5.chr4 C 0 C 0 s panPan2.chr4 87744377 604 + 195804263 TGCAAACATTATAGGACAGACAAATGGATATAAGGTTTCTTTCTGTGTTTCCTTATGTATTC-AAAATGGGAAAACTAGATGGAAGACAATTCATATTTATTTAGAATTCTAAATGATGTTAATTTTAGAACCTTCAATGTCAGAGTTACTGTGTATGAATAAGTTTACCTAATTTTCCACACTATGCATATCTAATAGAtatta-------------ctattgcacagatgagaaaactgcatctctgattattattattcattctagtcacagagataagaaagggcaaaatatcacaatataagcccaaatagttcttagtttaatggaata----ttctttccactggacttcaACttg-tttatctta--------------tttatctattcatttaAGATCAGTTGAAAAAAGAGATTTGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcttgggtatctaacagaaaactcaaatttagtatgtctgaattcaagctcactgctgcacatgttc------------acactgaaacaaagcaaaacaaaattccttcaacagattttctcatctcaataaatggcactacactgtgcctgcgtgactcatgtccaaaacctag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 30689 589 + 36344 TGCAAACATTATAGGATAGACAAGTGGATATAAGGTTTCTTTCTAGGTTTCCTTATATACTC-CAAATGGTAAAACTAGATGGAAGA--------------TTAAAATTCTAAATGTTGTTAATTTTAGAACCTTCAATGTCAGAGTTActttgtatgaatgagtttacctaattttccacactatgcatatctaatagatatta-------------ctattgcacaggtgagaaaactgcatctctgattattattattcactctagtcacagagataagaaagggcaaaatatcataataggagcccaaataggtcttattttaatggaata----tt-tttccactggacTTCAACTGG-TTTATCTTA--------------TTTATCCATCCATCTAAGATCAGTTGAAAAAAGAGACTTGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgcgtatctaacagaaaactcaaatttagtatgtctgaaatcaagctgactgctgcacgtgttc------------acactgaaacaaagcaaaacaaaattccttcaacagcttttctcatctcaataaatggtactacactgtgcctgtatgactcatgcccaaaacctag i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538247 604 + 85365473 TGCAAATATTATAGGATAGACAAATGGATATAAGGTTTCTTTCTGTGTTTCCTTATGTATTC-CAAATGGGAAAACTAGATGGAAGACAATGCATATTTATTTAGAATTCTAAATTACGTTAATTTTAGAACCTTCAATGTCAGAGTTACTTCCTATGAATAAGTTTACCTAAATTTCCACACTATGCATATCTAATAGAtatta-------------ctattgcacagatgagaaaactgcatctctgattattactattcattctagtcacagagataagaaagggcaaaatatcacaatataagcccaaatagttcttagtttaatggatta----ttccttccactggacttcaACTTG-TTTATCTTA--------------TTTATCTATTCATCTAAGATCAGTTGAAAAAAGAGACTTGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgggtatctaacagaaaactcaaatttagtatgtctgaaatcaagctgactgctgcacatgttc------------acactgaaacaaagcacaacaaaattccttcaacagattttctcatctcaataaatggcactacactgagcctttgtgactcgtgcccaaaacctac i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145383209 604 - 190429646 TGCAAACATTATAGGATAGACAAGTGGATATAAGGTTTCTTTCTATGTTTCCTTATATATTC-AAAATGGGAAAACTAGATGGAAGACAATGCATATTTATTTAGAATTCTAAATGATGGTAATTTTAGAACCTTCAATGTCAGAGTTActttatatgaataagtttacctaattttccacactatgcatatctaatagatacta-------------ccattgtacagattagaaaactgcatctctaattattattattcattctagtcacagagataagaaagggcaaaatatcacaatataagcccaaatagttattagtttaatggaata----ttctttccactggacTTCGACTTG-TTTTTTTTA--------------TTTATCTATTCACATAACATCAGCTGAAAAAAGGGACTAGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgagtatctaacagaaaattcaaatttagtgtgtctgaaatcaagctgactggtgcacatgttc------------acactgaaacaaagcaaaacaaaattccttcaacaacttttctcatctcaataaatggcagtacactgtgcctgtgtgactcatccccaaaacctag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144408654 603 - 189454096 TGCAAACATTATAGGATAGACAAGTGGATATAAGGTTTCTTTCTATGTTTCCTTATATATTC-AAAATGGGAAAACTAGATGGAAGACAATGCATATTTGTTTAGAATTCTAAATGATGGCAATTTTAGAACCTTCAATGTCAGAGTTACTTTATATGAATAAGTTTACCTAATTTTCCACACTATGCATATCTAATAGATACTA-------------CCATTGTACAGATTAGAAAACTGCATCTCTAATTATTATTATTCATTCTAGTCACAGAGATAAGAAAGGGCAAAATATCACAATATAAGTCCAAATAGTTATTAGTTTAATGGAATA----TTCTTTCCACTGGACTTCGACTTG--TTTTTTTT--------------ATTATCTATTCATATAACATCAGCTGAAAAAAGGGACTAGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgagtatctaacagaaaattcaaatttagtgtgtctgaaatcaagctgactggtgcacatgttc------------acactgaaacaaagcaaaacaaaattccttcaacaacgtttctcatctcaataaatggcagtacactgtgcctgtgtgactcatccccaaaacctag i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3521977 603 + 39453387 TGCAAACATTATAGGATAGACAAGTGGATATAAGGTTTCTTTCTATGTTTCCTTATATATTC-AAAATGGGAAAACTAGATGGAAGACAATGCATATTTATTTAGAATTCTAAATGATGGTAATTTTAGAACCTTCAACGTCAGAGTTActttatatgaataagtttacctaattttccacactatgcatatctaatagatacta-------------ccattgtacagattagaaaactgcatctctaattattattattcattctagtcacagagataagaaagggcaaaatatcacaatataagcccaaatagttattagtttaatggaata----ttctttccactggacttcgACTTT--TTTTTTTA--------------TTTATCTATTCATATAACATCAGCTGAAAAAAGAGACTAGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgagtatctaacagaaaattcaaatttagtgtatctgaaatcaagctgactggtgcacatgttc------------acactgaaacaaagcaaaacaaaattccttcaacaacttttctcatctcaataaatggcagtacactgtgcctgtgtgactcatccccaaaacctag i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1144448 605 + 25348628 TACAAACATTATAGGATAGACAAGTGGATATAAGGTTTCTTTCTATGTTTCCTTATATATTC-AAAATGGGAAAACTAGATGGAAGACAATGCATATTTATTTAGAATTCTAAATGATGGTAATTTTAGAACCTTCAATGTCAGAGTTActttatatgaataagtttacctaattttccacactatgcatatctaatagatatta-------------ccattgtacagattagaaaactgcgtctctaattattattattcattctagtcacagagataagaaagggcaaaatatcacaatataagcccaaatagttattagtttaatggaata----ttccttccactggacttcaACTTGTTTTTTTTCA--------------TTTATCTATTCATATAACATCAGCTGAAAAAAGAGACTAGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgaatatctaacagaaaattcaaatttagtgtgtctgaaatcaagctgactggtgcacatgttc------------acactgaaacaaagcaaaacaaaattcttccaacaacttttctcatctcaataaatggcactacactgtgcctgtgtgactcatgcccaaaacctag i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5154747 621 + 48547382 TGCAAACATTATAGGATAGACAAGTGGATATAAGGTTTCTTTC--TGTTTCCTTATATATTC-AAAATGGGAAAACTAGATGGAAGACAATACATATTTATTTAGAATTCTAAATGATGGTAATTTTAGAACCTTCAATGTCAGAGTTActttatatgaataagtttacttaattttccacaccatgcatatctaatatatatca-------------ccattttacagattacaaaactgcatctctgattattattattcattctagtcatagagataagaaagggcaaaatatcacaatataagcccaaatAGTTATTAGTTTAATGGAATATTCTTTCTTTCCACTGGACTTCAACttgtttttttttgttgttgtttttttttttATCTATTCATATAACATCAGCTGAAAAAAGAGACTAGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgggtgtctaacagaaaattcaaatttagtgtgtctgaaatcaagctgactagtgcacatgttc------------acactgaaacaaagcaaaacaaaattccttcaacaacttttctcatctcaataaatagcactacactgtgcctgtgtgactcatgctcaaaacctag i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 57829 605 + 130402 TGCAAACATTATAGGATAGACAAGTGGATATAAGGTTTCTTTCTATGTTTCCTTATATATTC-AAAATGGGAAAACTAGATGGAAGACAATGCATATTTATTTAGAATTCTAAATGATGGTAATTTTAGAACCTTCAATGTCAGAGTTACTTTATATGAATAAGTTTACCTAATTTTCCACACTATGCATATCTAATAGATATTA-------------CCATTGTACAGATTAGAAAACTGCATCTCTAATTATTATTATTCATTCTAGTCACAGAGATAAGAAAGGACAAAATATCACAATATAAGCCCAAATAGTTATTAGTTTAATGGAATA----TTCCTTCCACTGGACTTCAACTTGTTTTTTTTTA--------------TTTATCTATTCATATAACATCAGCTGAAAAAAGAGACTAGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgagtatctaacagaaaattcaaatttagtgtgtctgaaatcaagctgactggtgcacatgttc------------acactgaaacaaagcaaaacaaaattcctccaacaacttttctcatctcaataaatggcactacactgtgcctgtgtgactcatgcccaaaacctag i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4196256 604 + 12320365 TGCAAACATTATAGGATAGACAAGTGGATATAAGGTTTCTTTCTATGTTTCCTTATATATTC-AAAATGGGAAAACTAGATGAAAGACAATGCATATTTATTTAGAATTCTAAATGATGGTAATTTTAGAACCTTCAATGTCAGAGTTActttgtatgaataagtttacctaattttccacactatgcatatctaatagatatta-------------ccattgtacagattagaaaactgcatctctgattattattattcattctagtcacagagataagaaagggcaaaatatcacaatataagcccaaatagttcttagtttaatggaata----ttctttccactggacttcaACTTG-TTTTTCTTA--------------TTTATCTATTCATATAACATCAGCTGAAAAAAGAGACTTGCAGATGCAATattttagctaatatatccaatctcctatttgaaatctcctgggtatctaacagaaaagtcaaatttactgtgtctgaaatcaagctgactcctgcacatgttc------------acactgaaacaaagcaaaacaaaattccttcaacaacttttctcatctcaataaatggcactacactgtgcctgtgtgactcatgcccaaaacctag i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145657586 601 + 190850796 TACAAATATTATGAGATAGACAAGTGGATATAATGTTTCTTACTATGTTTCCTTATATATTC-AAAATTGGAAAACTAGATGGAAGACAATGCATATTTATTTAGAATTCTAAATGCTGTTAATTTTAGAACCTTCAATGTCAGAGTTActttgtatgaataagtttacctaattttccacactattcatatcaaatagatatta-------------ctattgcacagatgagaaaaccacatctcagattattattattcattctagtcacagagat-agaaatggcaaaatactgcaatataggcccagatagttattagtttaatggaata----ttcattccactggacttcaACTCA-TTTATCTTA--------------TTCATCTATTCATCTAAGATCCGTTGAAGAAAGAGACTTGTAGATGCAATATTTTGTctaatatatccaacctcctatttgaaatctcctgagta-ctagcagaaaactcaaatttagtatgtctggaatcaagcttactgctgcacatgttc------------atactgaaacaaag-aaaacaaaattccttgaacagcttttctcatctcaataaatggcactacacggtgcctgtgtgactcatgcccaaaatctag i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14568304 601 + 15139346 TACAAACATTGTAGGACAGACAAGTGTATATAAGGCTTATTACTATGTTTCCTTATATATTC-AAAATGGGAAAACTAGATGGAAGACAATGCATATTTATTTAGAATTCCAAATGATGTTAATTTTAGAACCTTCAATGTCAGAGTTActttgtgtgaataagtttacctaattttccacactatgtatatcaaatagttatta-------------ctattgcacagatgagaaaactgcatctcagattattattattcattctagtcacagagataagaaatggcaaaatactgcaatataggcccaaatagttattagtttaatggaata----ttctttccactggacttcaACTCA-TTTATC-----------------TTCATCTATTCATCTAAGATCTGTTGAAGAAAGAGACTTGCAGATGAAGTATTTTggctaatacatctgatctcctatttgaaatctcctgagtatctagcagaaaactcaaatttagtatgtctgaaatcaagctgactgctgcacatgttc------------acagtgaaacaaagaaaaacaaaattttttgaacagcttttctcatttcaataaatggcactacactgtgcctgtgtgactcatgcctaaaacctag i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 394383 602 + 3802414 TACAAACATTATAGGATAGACAAGTGGATATAAGGTTTCTTACTATGTTTCCTTATATATTC-AAAATGGGAAAACTAGATGGAAGACAATGCATATTTATTTAGAATTCTAAATGACGTTAATTTTAGAATCTTCAAGGTCAGAGTTActttgtatgaataagtttacctaattttccacactacgcatatcaaatagatatta-------------ctattgcacagatgagaaaaccgcatctcagaatattattattcattctagtcacagata--agaaatggcaaaatactgcaatacaggcccaaatagttattagtttaatggaata----ttctttccactgaacTTCAACTCA-TTTATCTTA--------------TTCATCTATTCATCTAAGATCCGTTGAAGAAAGAGACTTGCAGATGCAATATTTTggctaatatatccaatctcctttttgaaatctcctgagtatctagaagaaaactcaaatttagtatgtctgaaatcaagctgactgctacacatgttc------------acactgaaacaaagcaaatcaaaattccttgaacagctcttctcatctcaataaatggcactacactgtgcctgtgtgactcatgcccaaaacctag i cebCap1.NW_016107603v1 I 7 I 682 s aotNan1.NW_018493494v1 9753784 604 + 11631747 TACAAACATTATAGGATAGACAAGTGTATATAAGGTTTCTTACTATGTTTCCTTATATATTC-AAAATGGGAAAACCAGATGGAAGACAATGCATATTTACTTAGAATTCTAAATGATGTTAATTTTAGAAGCTTCAATGTCAGAGTTActttgtatgaataagtttacctaattttccacactatgcatatcaaatagatatta-------------ctattgcacagatgagaaaactgcatctcagattattattattcattctagtcacagatataagaaatggcaaaatattgcaatataggcccaaatagttcttagtttaatggaata----ttctttccactggacTTCAACTCA-TTTATCTTA--------------TTTATCTATTGATCTAAGATCCGTTGAAGAAAGAGATTTGCAGATGCAATATTTTggctaatatatccaatctcctatttggaatctcctgagtatctagcagaaaactcaaatttagtacgtctgaaatcaagctgactgctgcacatgttc------------acactgaaacaaagcaaaacaaaattccttgaacagcttttctcatctcaataaatggcactacactgtgcctgtgtgactcatgcccaaaacctag i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21701823 593 - 63241923 TGCAAACATTATAGGATGGGCATGTGGACATATGACATTGTTCTGT-----CTTATGTATTCAAAAATGGGAAAACTAAATGGAGGATAATGCATATTTGTTTTGGACTCCAAACAATTTTAATTTTATAAA-TTCAGTGTTGGAGCTACTTTATATGAATAACTGTACTGA--TTTCCACACTGTGAATATCAAATAGGCATTATTAattattactgccattgcacaaatgagaaaacaatctcttgagagatt----tttactctagtcacatagataagaaagaggggaa---cacaacacgaacccaga----tctaagtttaatggga-a----t--cttccactgtacctcaatgcA-TTTAATGAA--------------------TATCTAGTTAGTATCAGTTGAAGAAAGAGA-TCACAAATGTAATATGTTA---CACACATGCAACCTCCTACTGGAAATCTCCTGA-TAACTAACAGAAATCTCA----TAGTGTGTCGAAAATCAAGGTAACTACCAAACATCTCCTCACACACACCGCCACTGAAACAACACAAAACAAATTTTCTTGAATGGTTCTCCTCATCTCAATAAATGGCACCACAGTGTGCCCCTGAAAACTCTGCCCCATATCCAG i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I a score=431075.000000 s hg38.chr9_KI270719v1_random 139525 58 + 176845 aggtcgacctaggttc--------ttttttt-ccccatgactctcc-atttccaagatttccaattct---------- s panTro5.chr4 86968633 59 + 194502333 aggtcaacctaggttc--------ttttttttccccatcactctcc-atttccaagatttccatttct---------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87744981 58 + 195804263 aggtcaacctaggttc--------ttttttt-ccccatcactctcc-atttccaagatttccatttct---------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 31278 58 + 36344 aggtcgacctaggttc--------ttttttt-ccccatgactctcc-atttccaagatttccatttct---------- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538851 59 + 85365473 aggtcaacctaggttc--------ttttttctccccatcactctcc-atttccaagatttccgtttct---------- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145383813 59 - 190429646 aggtccaccttggttc--------cttcttatccccatcactctcc-atttccaagatttccgtttct---------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144409257 59 - 189454096 aggtccaccttggttc--------cttcttatccccatcactctcc-atttccaagatttccgtttct---------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3522580 59 + 39453387 aggtccaccttggttc--------cttcttatccccatcactctcc-atttccaagatttcagtttct---------- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1145053 59 + 25348628 aggtccaccttggttc--------ctttttatccccatcaccctcc-atttccaagatttccgtttct---------- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5155368 59 + 48547382 aggtcaaccttggttc--------ctttttatccccatcactgtcc-atttccaagatttccgtttct---------- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 58434 59 + 130402 aggtccaccttggttc--------ctttttatccccatcactctcc-atttccaagatttccgtttct---------- i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4196860 59 + 12320365 aggacaaccttggttc--------ctttttatccccatcactctcc-atttccaagatttccgtttct---------- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145658187 62 + 190850796 cggtcaatctctgttc-----ttttttttcattcccaacactctcc-atTTCTAAGATTCCCACTTCT---------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14568905 64 + 15139346 tggtcaatctatgttc---tttttttttttattctcaacactctcc-atttctaagatttccacttct---------- i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9754388 67 + 11631747 tggtcaacctatgttcctttttttttttttattcccaacactctcc-atttctaagatttccacttct---------- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21702416 56 - 63241923 AGGTCAACCT---TTC-------------------CATCACTCTCTAAGTCccaatattcccatttgcctctttttct i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 695183 1240 + 1045278 I e cebCap1.NW_016107603v1 394985 682 + 3802414 I a score=57599.000000 s hg38.chr9_KI270719v1_random 139583 7 + 176845 tccttga s panTro5.chr4 86968692 7 + 194502333 tctgtga i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745039 7 + 195804263 tctgtga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 31336 7 + 36344 tccgtga i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538910 7 + 85365473 tctgtga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145383872 7 - 190429646 tctgtga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144409316 7 - 189454096 tctgtga i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3522639 7 + 39453387 tctgtga i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1145112 7 + 25348628 tctgtga i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5155427 7 + 48547382 tctgtga i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 58493 7 + 130402 tctgtga i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4196919 7 + 12320365 tctgtga i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145658249 7 + 190850796 ACTGTGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14568969 7 + 15139346 actgtga i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9754455 7 + 11631747 actgtga i aotNan1.NW_018493494v1 C 0 C 0 s tarSyr2.KE948818v1 696423 6 + 1045278 TTTATG- i tarSyr2.KE948818v1 I 1240 I 3757 s canFam3.chr13 21702472 7 - 63241923 actgtaa i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e cebCap1.NW_016107603v1 394985 682 + 3802414 I a score=1433938.000000 s hg38.chr9_KI270719v1_random 139590 193 + 176845 acacttctcaaagccacacccatctctctgtcag-aataccacaatgcattgcaaatctgcctccccact--------tgtcatctcctccctaaatgctctattttcacagtagtctgagtggcttttttttttttaaagcacacaagatcttgactcttcattccctactttctgctttaactccttgtttggctttcct s panTro5.chr4 86968699 190 + 194502333 atacttctcaaagccacacccatctctctgtcag-aatatcacaatgcatcgcaaatctgcctccccact--------tgtcatctcctccctaaatgctccattttcacagtagtcagaatga---ttttctttttaaagcacacaagatcttgactcttcattcgctaccttctgctttaactccttgattgtctttcca i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745046 190 + 195804263 attcttctcaaagccacacccatctctctgtcag-aatatcacaatgcatcgcaaatctgcctccccact--------tgtcatctcctccctaaatgctccattttcacagtagtcagaatga---ttttctttttaaagcacacaagatcttgactcttcattagctaccttctgctttaactccttgattgtctttcca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 31343 193 + 36344 acacttctcaaagccacacccatctctctgtcag-aataccacaatgcattgcaaatctgcctccccact--------tgtcatctcctccctaaatgctctattttcacagtagtcagagtggcttttttttttttaaagcacacaagatcttgactcttcattccctactttctgctttaactccttgtttggctttcct i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42538917 185 + 85365473 atatttctcaaagccacacccatccctctgtcag-aatatcacaatgcatcgcaaatctgcctccctact--------tg---tctcctccctaaatgctttattttgacagtagtcagagtga-----ttcttttttaagcacacaatatcttgactcttcgttccctaccttctgctttaactctttgattggttttcca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145383879 187 - 190429646 acacttctcaaagctacacccatccctctgtcag-aatatcacaaagcaacacaaatctacctctccact--------tatcatctcctccctaaatgctctattttcacagtagtcagagtga------ttttttttaagcatacaagatcttgactcttcattccctaccttctgctttaactccttgattggctttcca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144409323 187 - 189454096 acacttctcaaagctacacccatccctctgtcag-aatatcacaaagcaacacaaatctacctctccact--------tatcatctcctccctaaatgctctattttcacagtagtcagagtga------ttttttttaagcatacaagatcttgactcttcattccctaccttctgctttaactccttgattggctttcca i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3522646 187 + 39453387 acacttctcaaagctacacccatccctctgtcag-aataacacaaagcaacacaaatctacctctccact--------tatcatctcctacctaaatgctctattttcacagtagtcagagtga------ttttttttaagcatacaagatcttgactcttcattccctaccttctgctttaactccttgattggctttcca i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1145119 187 + 25348628 acacttctcaaagctacacccatccctctgtcag-aatatcacaaagcaacacaaatctacctctagact--------tagcatctcctccctaaatgctctattttcacagtagtcagagtga------ttttttttaagcatacaagatcttgactcttcattccctaccttctgctttaactccttgattggctttcca i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5155434 187 + 48547382 acacttctcaaagctacacccatctctctgtcag-aatatcacaaagcaacacaaatctccctctccact--------tgtcatctcctccctaaatgctctattttcacagtagtcagagtga------ttatttttaagcacacaagatcttgactcttcattccctaccttctgctttaactccttgattggctttcca i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 58500 188 + 130402 acacttctcaaagctacacccatccctctgtcagaaatatcacaaagcaacacaaatctacctctccact--------tatcatctcctccctaaatgctctattttcacagtagtcagagtga------ttttttttaagcatacaggatcttgactcttcattccctaccttctgctttaactccttgattggctttcca i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4196926 187 + 12320365 acacttctcaaagctacacccatctctctgtcag-aatatcacaaagcaacacaaatctacctctccact--------tgtcaactcctccctaaatgctctattttcacagtagtcagagtga------ttttttttaagtacacaagatcttgactcttcattccctcccttctgctttaactccttgattggctttcca i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145658256 162 + 190850796 ACACTTATCTA----------------CTGT--G-A-----ACAATGCAGCCCAAATCTGCCTCCCCATG--------TGTCATCTGCTCCTTAAATG--CTGTTTTTATAGTAGTCAGAGTGA------TTTTTTTTAAGCACATGGAATCTTGGCTCTTTGTTCCCTACCTTCTGCTTTAACTCCTTGATTAGCTTTCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14568976 158 + 15139346 acacttatc--------------------------------acagtgcatcccaaatctgcctccccatg--------tgtcatctcctccctaaatgctctgttttcacagtagtcagagtga----ttttttttttaagcacatgagatcttggctctttgttccctaccttctgctttaactccttgattagctttcca i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9754462 157 + 11631747 acacttatc--------------------------------acaatgcatcccaaatctgcctccccatg--------tgtcatctcctccctaaatg--ctattttcacagtagttagagtga---tttttttttttaagcacatgaggtcttggttctttgttccctaccttctgctttaactccttgattagctttcca i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21702479 191 - 63241923 actctagccaaagccacttcc-tttctcctttag-aatatgacaagcatccccaaacctgcctccctacttccctatgtgtcaacccctccctcagtgatctattttcacagtagccatagtga------tattttgaaaaatcacaagGTCTTGGCTCCTTTTTTGTTTttttttgttttttgttttttgtttttttt--- i canFam3.chr13 C 0 I 724 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e cebCap1.NW_016107603v1 394985 682 + 3802414 I a score=89276.000000 s hg38.chr9_KI270719v1_random 139783 14 + 176845 ctgctaatataaag s panTro5.chr4 86968889 14 + 194502333 ctgctaatataagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745236 14 + 195804263 ctgctaatataagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 31536 14 + 36344 ctgctaatataaag i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539102 14 + 85365473 ctgctaatataagg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145384066 14 - 190429646 ctgcttatataagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144409510 14 - 189454096 ctgcttatataagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3522833 14 + 39453387 ctgcttatataagg i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1145306 14 + 25348628 ctgcttatataagg i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5155621 14 + 48547382 ctgcttatataagg i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 58688 14 + 130402 ctgcttatataagg i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4197113 14 + 12320365 ctgcttatataagg i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145658418 11 + 190850796 CTA---atataaag i calJac3.chr3 C 0 I 799 s saiBol1.JH378162 14569134 11 + 15139346 cta---atataaag i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9754619 11 + 11631747 cta---atgtaaag i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21702670 724 - 63241923 I e cebCap1.NW_016107603v1 394985 682 + 3802414 I a score=778980.000000 s hg38.chr9_KI270719v1_random 139797 95 + 176845 aaaaatttccaacttctttttaatgaccatagatcctggcttgatgttttctacctacctctccaaccacatgtcatacacttcccttcttttct s panTro5.chr4 86968903 95 + 194502333 aaaattttccaactcctttttaatgaccatagatcctggcttgatgttttctgcctgcctctccaaccacatgtcaaacacgtcgcttcttttcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745250 95 + 195804263 aaaattttccaactcctttttaatgaccatagatcctggcttgatgttttctgcctgcctctccaaccacatgtcaaacacgtcgcttcttttcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 31550 95 + 36344 aaaaatttccaacttctttttaatgaccatagatcctggcttgatgttttctacctacctctccaaccacatgtcatacacttcccttcttttct i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539116 95 + 85365473 aaaattttccaactcctttttaatgaccatagatcctggcttgatgttttctgcctgcctctccaaccacatgtcaaacacatcccttcttttcc i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145384080 93 - 190429646 aaaattttccaactcctttttaacgaccatagatcttggcttgatgttttctgcctgcctctccaaccac--gtcatacacgtcccttcttttct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144409524 93 - 189454096 aaaattttccaactcctttttaacgaccatagatcttggcttgatgttttctgcctgcctctccaaccac--gtcatacacgtcccttcttttct i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3522847 93 + 39453387 aaaattttccaactcctttttaacgaccatagatcttggcttgatgttttctgcctgcctctccaaccac--gtcatacacgtcccttcttttct i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1145320 93 + 25348628 aaaattttccaactcctttttaacgaccatagatcttggcttgatgttttctgcctgcctctccaaccac--gtcatacacgtcccttcttttct i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5155635 93 + 48547382 aaaattttccaactcctttttaacgaccatagatcttggcttgatgttttctgcctgcctctccaaccac--gtcatacatgtcctttcttttct i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 58702 91 + 130402 aaaattttccaactcctttttaacgaccatagatcttggcttgatgttttctgcctgcctctccaaccac--gtcatacacgtcc--ccttttct i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4197127 95 + 12320365 aaaattttccaactcctttttaatgactgtagatcgtggcttgatgttttctacctgcccctccaaccacatgtcatacacatcccttcttttct i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145659228 95 + 190850796 GAAAATTTCCAGCTCCTTTTTAATGACTTCAGATCCTGGCTTGATGTTTTCTGCCTACCTCTCCAACCACATGTTATACACTTCCCTTCTTTTCT i calJac3.chr3 I 799 C 0 s saiBol1.JH378162 14569145 94 + 15139346 aaaattttccaactcctttttaatgactgtaaatcctggcttgat-ttttttgcctatctctccaaccacatgttatacacttcccttcttttat i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9754630 93 + 11631747 aaaattttccaactcctttttaatgactgtagatcctggcttgatgttttctgcctacctctcgaaccac--gtcatacacttcccttcttttct i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 112634 2209 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21702670 724 - 63241923 I e cebCap1.NW_016107603v1 394985 682 + 3802414 I a score=19110.000000 s hg38.chr9_KI270719v1_random 139892 2 + 176845 ta s panTro5.chr4 86968998 2 + 194502333 ta i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745345 2 + 195804263 ta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 31645 2 + 36344 ta i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539211 2 + 85365473 ta i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145384173 2 - 190429646 ta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144409617 2 - 189454096 ta i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3522940 2 + 39453387 ta i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1145413 2 + 25348628 ta i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5155728 2 + 48547382 ta i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 58793 2 + 130402 ta i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4197222 2 + 12320365 ta i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145659323 2 + 190850796 TA i calJac3.chr3 C 0 C 0 s aotNan1.NW_018493494v1 9754723 2 + 11631747 ta i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 114843 2 + 255898 TA i dasNov3.JH575793 I 2209 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21702670 724 - 63241923 I e cebCap1.NW_016107603v1 394985 682 + 3802414 I e saiBol1.JH378162 14569239 0 + 15139346 C a score=2653514.000000 s hg38.chr9_KI270719v1_random 139894 277 + 176845 tcacacccaaaacattcttaattatttccacagtctttgt-gtatgccaaccctttttctgcctctagaattttgtgcttgt-ttctctttctttctaaa---ataagctttctgtggctttttgtaaaattagatcattgttcttt-gaaatctcggctaagaagtTTTCTGAAATACCTTAATT-----AAAGTTCCTTCCCTGGTTACTAGCAGTCTCCTCACTTTGTTTATTTTTATTGTAATCTTTAATGATTGTTTTCTATTTGTTTGATTTCTTG-------------------------ATCA-AC s panTro5.chr4 86969000 299 + 194502333 tcacacccaaaacatttttaattatttcctcaatctttgt-atacgccaacccttttttggtctctagaattttgtgcttgt-tgctctttctttctaaa---ataaactttctgtggctttttgtacaattagatcattgttcttt-gaaatctcagctaagaagttttctgaaatatcttaatt-----aaagttccttccctgggtacgagcagtctcctcactttgtttatttttattgtaatatttaattattgttttctgtttgttcgatttcttgtttcttgttt----ctcaggtcaagatcatat i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745347 299 + 195804263 tcacacccaaaacatttttaattatttccccaatctttgt-atacgccaacccttttttggcctctagaattttgtgcttgt-tgctctttctttctaaa---ataaactttctgtggctttttgtacaattagatcattgttcttt-gaaatctcagctaagaagttttctgaaatatcttaatt-----aaagttccttccctgggtacgagcagtctcctcactttgtttatttttattgtaatatttaattattgttttctgtttgtttgatttcttgtttcttgttt----ctcaggtcaagatcatat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 31647 276 + 36344 tcacacccaaaacattcttaattatttccacagtctttgt-atatgccaaccctttttctgcctctagaattttgtgcttgt-t-ttctttctttctaaa---ataagctttctgtggctttttgtaaaattagatcattgttcttt-gaaatctcggctaagaagtTTTCTGAAATACCTTAATT-----AAAGTTCCTTCCCTGGTTACTAGCAGTCTCCTCACTTTGTTTATTTTTATTGTAATCTTTAATGATTGTTTTCTATTTGTTTGATTTCTTG-------------------------ATCA-AC i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539213 302 + 85365473 tcacgcccaaaacatttttaattatttccccaatctttgt-atatgccaaccc-ttttcagcctctagaattttgtgcttgt-tgctctttctttctaaa---ataaactttctgtggctttttgtacaattagatcattgttcttt-gaaatctcagctaagaagttttctgaaatatcttaatt-----aaagttccttcccttgttatgagcagtctcctcactgtgtttatttttattgtaatatttatttattgttttctatttgttccatttcttgtttcttgtttctccctcaggtcaagatcgtat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145384175 301 - 190429646 tcacacccgaaacatttttaattatttccccagtttttgt-atataccaaccctttctctgcatgtagaattttgtgcttgt-tgctctttctttctaaa---ataaactttcTGTGGC-TTTTGTACAATTAGATCATTGTTCTTT-GAAATCTCAGCTAAGAAGTTTTCTGAAATACCTTAATT-----AAAGTTCCTTCCCTGGTTACTAGCAGTCTCCTCACTttgtttatttttattgtaatttttaattattgttttctatttgttcgatttcttgtttcttgtttTTCC-TCAGGTCAAGATCATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144409619 302 - 189454096 tcacacccgaaacatttttaattatttccccagtttttgt-atataccaaccctttctctgcatgtagaattttgtgcttgt-tgctctttctttctaaa---ataaactttcTGTGGCTTTTTGTACAATTAGATCATTGTTCTTT-GAAATCTCAGCTAAGAAGTTTTCTGAAATACCTTAATT-----AAAGTTCCTTCCCTGGTTACTAGCAGTCTCCTCACTttgtttatttttattgtaatttttaattattgttttctatttgttcaatttcttgtttcttgtttTTCC-TCAGGTCAAGATCATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3522942 302 + 39453387 tcacacccgaaacatttttaattatttccccagtttttgt-atataccaaccctttctctgcatgtagaattttgtgcttgt-tgctctttctttctaaa---ataaactttcTGTGGCTTTTTGTACAATTAGATCATTGTTCTTT-GAAATCTCAGCTAAGAAGTTTTCTGAAATACCTTAATT-----AAAGTTCCTTTCCTGGTTACTAGCAGTCTCCTCACTttgtttatttttattgtaatttttaattattgttttctatttgttcgatttcttgtttcttgtttTTCC-TCAGGTCAAGATCATAT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1145415 302 + 25348628 tcacacccaaaacatttttaattatttccccagtttttgt-atataccaaccctttctctgcatgtagaattttgtgcttgt-tgctctttctttctaaa---ataaactttcTGTGGCTTTTTGTACAATTATATCATTGTTCTTT-GAAATCTCAGCTAAGAAGTTTTCTGAAATACCTTAATT-----AAAGTTCCTTTCCTGGTTACTAGCAGTCTCCCCACTttgtttatttttattgtaatttttaattattgttttctatttgtttgatttcttgtttcttgtttTTCC-TCAGGTCAAGATCATAT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5155730 302 + 48547382 tcacacccaaaacatttttaattatttccccagtttttgt-atatgccaaccctttctctgcatctagaattttgtgcttgt-tgctccttctttctaaa---ataaactttcTGTGGCTTTTTGTACAATTAGATCATTGTTCTTC-GAAATCTCAGCTAAGAAGTTTTCTGAAATACCTTAATT-----AAAATTCCTTCCCTGGTTACTAGTAGTCTCCTCACTttgtttatttttattgtaatctttaattattgttttctatttgttcgatttcttgtttcttgtttTTCC-TCAGGTCAAGATCATAT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 58795 302 + 130402 tcacacccaaaacatttttaattatttccccagtttttgt-atataccaaccctttctctgcatgtagaattttgtgcttgt-tgctctttctttctaaa---ataaactttcTGTGGCTTTTTGTACAATTAGATCATTGTTCTTT-GAAATCTCAGCTAAGAAGTTTTCTGAAATACCTTAATT-----AAAGTTCCTTCCCTGGTTACTAGCAGTCTCCTCACTttgtttatttttattgtaatttttaattattgttttctatttgttcgatttcttgtttcttgtttTTCC-TCAGGTCAAGATCATAT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4197224 301 + 12320365 tcacacccaaaacatttttaattatttctccagtttttgt-ata--ccatccctttctctgcacctagaattttgtgcttgt-tgctctttctttctaaa---ataaactttctgtggctttttgtacaattagatcattgttcttt-gaaatctcagctaagaagttttctgaaataccttaatt-----aaagttccttccctggttactagcagtctcctcactttgtttatttttattgtaatttttaattattgttttctatttgtttggtttcttgtctcttgtttctcctttaggtcaagatcatat i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145659325 283 + 190850796 ACATACCC-AAACGTTCTTAATTATTTCTCCAATCTTTGT-ATATGCCAACCCCTCTTCTGCCTC--------TGTGCTTGT-TTCTCTTTCTTTCTAAA---ATAAGATTTCTGTGGCTTTTTGTACAGTTAAATCATTGTTCTTC-GAAATCTCAGCTAAGAAGTTTTCTGAAACACCTTAATT-----AAAGTTCCTTCCCTGGTTACTAGCAGTCTCCTCACTTTGtttatttttattataatctttaattactgttttctatttgt----attcttgtttttTGTTTCTCCCTCAGGTCAAG------- i calJac3.chr3 C 0 I 7 s saiBol1.JH378162 14569239 287 + 15139346 -catacccaaaacattcttaattatttctccaatctttgt-atatgccaacccctcttctgcctctggaattttgtgcttgt-ttctctttctttctaaa---ataagctttctgtgactttttgtagaattaaatcattgttcttt-gaaatctcagctaagaaattttctgaaacacc----tt-----aaagttccttccctgTTTACTAGCAGTCTCCTCACTTTGtttatttttattataatttttaattactgttttctatttgt----tttcttgtttttTGTTTCTCCCTCAGGTCAAG------- i saiBol1.JH378162 C 0 I 7 s aotNan1.NW_018493494v1 9754725 292 + 11631747 ccatacccaaaacattcttaattatttctccaatcttggt-atatgccaaccccccttctgcctctggaattttgtgcttgt-ttctctttctttctaaa---aTAAGTTTTCTGTGGCTTTTTGTACAATTAAATCATTGTTCTTT-GAAATCTCAGCTAAGAAGTTTTCTGAAACACCTTAATT-----AAAGTTCCTTCCCTGGTTACTAGCAGTCTCCTCACTTTGTTTATTTTTATTATAATCTTTAATTACTGTTTTCTATTTGT----TTTCTCATTTTTTGTTTCTCCCTCAGGTCAAG------- i aotNan1.NW_018493494v1 C 0 I 7 s canFam3.chr13 21703394 296 - 63241923 TCCTACCCCAAAGTTTCTCGATCACTTTCCCAATTTGGGGAATATGCCGTCCCTTTTCCAGTCTATGACTCTACATGTGTGCGTCTTCTCTCTTTCTAGA---ATATCCTTTCTCTAGTCCTTTGTATAGTT-----ACTATTCCTTAGAAATCTCAGCCAA-AAATTTCCTGACTCATCTTAGTTAA-TGAAAATTGTTTGCCTGCTTACGAGCTACCTCTTCAC----TTTATTTCCCCCATTATCTTCAATTATTATTTCCTATTTAT----TTTCTTGTTTATTGTGTCTCCCTAAGATCAAGGTCAAAT i canFam3.chr13 I 724 C 0 s dasNov3.JH575793 114845 287 + 255898 CCACACCTCGGATATTCTTGACCACATTTTCAGTCTTTGG-CTATAAGAACCCCTTTTGTGTCTATCAAAAAGTATGCTTGT----TCTCTCTTTCTAGATCTCTAATATTCCTCTGGCTCCTTGTATAGTTAG---ATTGTTCTTT-AAGATCTCAGGTAA-AATTTTCCTGACATACCTTAATTAATTTAAAATTGCTTTCCCAGGCACTAAATA-----TTACCTTTTTTATTTCATTCAAAATCTTCAATTATCGTTTT------------TTTTTTGTTCACTGTGTCTCCCTCAGGTCAAGGTCATAT i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e cebCap1.NW_016107603v1 394985 682 + 3802414 I a score=815683.000000 s hg38.chr9_KI270719v1_random 140171 73 + 176845 TCAAATTTGTATCCTCAGCTCTTATCAAAATACTAGGTAactacacacctattaaaacaactaaacataaaaa- s panTro5.chr4 86969299 73 + 194502333 tcaaatttgtattctcagctcttatcaaactactaggTAactacacacctattaaaacaactaagcataaaaa- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745646 73 + 195804263 tcaaatttgtatcctcagctcttatcaaactactaggTAactacacacctattaaaacaactaagcataaaaa- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 31923 73 + 36344 TCAAATTTGTATCCTCAGCTCTTATCAAAATACTAGGTAactacacacctattaaaacaactaaacataaaaa- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539515 73 + 85365473 tcaaatttgtatcctcagctcttagcaaactactaggTAactacatacctattaaaacaactaagcatacaaa- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145384476 73 - 190429646 TCAAATTTGTACCCTCAGTTCTTATCAAACTACTAGGTAACTACACACCTATTAAAACAACTAAGCATAAAAA- i rheMac8.chr5 C 0 I 1046 s macFas5.chr5 144409921 73 - 189454096 TCAAATTTGTACCCTCAGTTCTTATCAAACTACTAGGTAACTACACACTTATTAAAACAACTAAGCATAAAAA- i macFas5.chr5 C 0 I 1047 s macNem1.NW_012011022v1 3523244 73 + 39453387 TCAAATTTGTACCCTCAGTTCTTATCAAACTACTAGGTAACTACACACCTATTAAAACAACTAAGCATAAAAA- i macNem1.NW_012011022v1 C 0 I 1 s cerAty1.NW_012002843v1 1145717 73 + 25348628 TCAAATTTGTACCCTCAGTTCTTATCAAACTACTAGGTAACTACACACCTATAAAAACAACTAAGCATAAAAA- i cerAty1.NW_012002843v1 C 0 I 1047 s chlSab2.chr27 5156032 73 + 48547382 TCAAATTTGTATCCTCAGCTCTTATCAATCTACTAGGTAactacacacctattaaaacaactaagcataaaaa- i chlSab2.chr27 C 0 I 1 s manLeu1.NW_012102858v1 59097 73 + 130402 TCAAATTTGTACCCTCAGTTCTTATCAAACTACTAGGTAACTACACAACTATTAAAACAACTAAGCATAAAAA- i manLeu1.NW_012102858v1 C 0 I 1044 s colAng1.NW_012120821v1 4197525 71 + 12320365 tcaaatttgtatcctcagctcttatcatactactaggTAactacacacctattaaaacaac--agcataaaaa- i colAng1.NW_012120821v1 C 0 I 1 s calJac3.chr3 145659615 73 + 190850796 TTAAATTTATATCCTCAGCTGTTATCAAAATACTAGGtcatgacacacctattaaaacaataaaacgtaaaaa- i calJac3.chr3 I 7 I 1 s saiBol1.JH378162 14569533 73 + 15139346 TCAAATTTGTATTCTCAGCTGTTATCAAAATACTAGGtcactacacacctattaaaacaataaaacataaaaa- i saiBol1.JH378162 I 7 I 1 s cebCap1.NW_016107603v1 395667 73 + 3802414 TCAAATTTGTATCCTCAGATGTTATCAAAATACTAGGtcactacacacctattaaaacaataaaacataaaaa- i cebCap1.NW_016107603v1 I 682 I 1 s aotNan1.NW_018493494v1 9755024 73 + 11631747 TCAAATTTGTATCCTCAGCTGTTATCAAAATACTAGGtcactacacacctattaaaacaataaaacataaaaa- i aotNan1.NW_018493494v1 I 7 I 1 s canFam3.chr13 21703690 72 - 63241923 TCAAACTTGTATTCTCAGCTCTTGTCAAA-TGCTAGatgaccacacaattattatatcagctaaaagtaagaa- i canFam3.chr13 C 0 I 7 s dasNov3.JH575793 115132 72 + 255898 TCAACTTTATATCCT-AGCTTTTATCAGAATGCTAGGCAaccacacacctactaaaacagttaaa-ataaaaaa i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=83295.000000 s hg38.chr9_KI270719v1_random 140244 11 + 176845 t-agtgacaaca s panTro5.chr4 86969372 12 + 194502333 ttagtaacaaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745719 12 + 195804263 ttagtgacaaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 31996 11 + 36344 t-agtgacaaca i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539588 12 + 85365473 ttagtgacaaca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145385595 11 - 190429646 -tagtgacaaca i rheMac8.chr5 I 1046 C 0 s macFas5.chr5 144411041 11 - 189454096 -tagtgacaaca i macFas5.chr5 I 1047 C 0 s macNem1.NW_012011022v1 3523318 11 + 39453387 -TAGTGACAAca i macNem1.NW_012011022v1 I 1 I 1027 s cerAty1.NW_012002843v1 1146837 11 + 25348628 -tagtgacaaca i cerAty1.NW_012002843v1 I 1047 C 0 s chlSab2.chr27 5156106 11 + 48547382 -tagtgacaaca i chlSab2.chr27 I 1 C 0 s manLeu1.NW_012102858v1 60214 11 + 130402 -tagtgacaaca i manLeu1.NW_012102858v1 I 1044 C 0 s colAng1.NW_012120821v1 4197597 11 + 12320365 -tagtaacaaca i colAng1.NW_012120821v1 I 1 C 0 s calJac3.chr3 145659689 10 + 190850796 -tagtgacagg- i calJac3.chr3 I 1 C 0 s saiBol1.JH378162 14569607 11 + 15139346 -tagtgacagga i saiBol1.JH378162 I 1 C 0 s cebCap1.NW_016107603v1 395741 11 + 3802414 -tagtgacagga i cebCap1.NW_016107603v1 I 1 C 0 s aotNan1.NW_018493494v1 9755098 11 + 11631747 -tagtgacagga i aotNan1.NW_018493494v1 I 1 C 0 s canFam3.chr13 21703769 12 - 63241923 agggggacaaca i canFam3.chr13 I 7 I 3 s dasNov3.JH575793 115204 9 + 255898 -tactgataa-- i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=-4846.000000 s hg38.chr9_KI270719v1_random 140255 3 + 176845 aaa s panTro5.chr4 86969384 3 + 194502333 aat i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745731 3 + 195804263 aat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 32007 3 + 36344 aaa i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539600 3 + 85365473 aat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145385606 2 - 190429646 aa- i rheMac8.chr5 C 0 I 1 s macFas5.chr5 144411052 2 - 189454096 aa- i macFas5.chr5 C 0 I 1 s cerAty1.NW_012002843v1 1146848 2 + 25348628 aa- i cerAty1.NW_012002843v1 C 0 I 1 s chlSab2.chr27 5156117 2 + 48547382 aa- i chlSab2.chr27 C 0 I 1 s manLeu1.NW_012102858v1 60225 2 + 130402 aa- i manLeu1.NW_012102858v1 C 0 I 1 s colAng1.NW_012120821v1 4197608 2 + 12320365 aa- i colAng1.NW_012120821v1 C 0 I 1 s calJac3.chr3 145659699 2 + 190850796 aa- i calJac3.chr3 C 0 I 1 s saiBol1.JH378162 14569618 2 + 15139346 aa- i saiBol1.JH378162 C 0 I 1 s cebCap1.NW_016107603v1 395752 2 + 3802414 aa- i cebCap1.NW_016107603v1 C 0 I 1 s aotNan1.NW_018493494v1 9755109 2 + 11631747 aa- i aotNan1.NW_018493494v1 C 0 I 1 s canFam3.chr13 21703784 2 - 63241923 aa- i canFam3.chr13 I 3 I 1 s dasNov3.JH575793 115213 2 + 255898 at- i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e macNem1.NW_012011022v1 3523329 1027 + 39453387 I a score=349004.000000 s hg38.chr9_KI270719v1_random 140258 35 + 176845 gctggcaa---------tgatgaagaaactgta-tcattcataca s panTro5.chr4 86969387 35 + 194502333 gctggcaa---------agatgaagaaactgta-tcattcagaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745734 35 + 195804263 gctggcaa---------agatgaagaaactgta-tcattcagaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 32010 35 + 36344 gctggcaa---------tgatgaagaaactgta-tcattcataca i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539603 35 + 85365473 gctggcaa---------agatgaagaaactgta-tcattcataca i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145385609 33 - 190429646 gctggcaa---------agatgaagaaat--ta-tcattcataca i rheMac8.chr5 I 1 C 0 s macFas5.chr5 144411055 33 - 189454096 gctggcaa---------agatgaagaaat--ta-tcattcataca i macFas5.chr5 I 1 C 0 s macNem1.NW_012011022v1 3524356 33 + 39453387 gctggcaa---------agatgaagaaat--ta-tcattcataca i macNem1.NW_012011022v1 I 1027 C 0 s cerAty1.NW_012002843v1 1146851 33 + 25348628 gctggcaa---------agatgaagaaat--ta-tcattcataca i cerAty1.NW_012002843v1 I 1 C 0 s chlSab2.chr27 5156120 33 + 48547382 gctggcaa---------agatgaagaaat--ta-tcattcataca i chlSab2.chr27 I 1 C 0 s manLeu1.NW_012102858v1 60228 33 + 130402 gctggcaa---------agatgaagaaat--ta-tcattcataca i manLeu1.NW_012102858v1 I 1 C 0 s colAng1.NW_012120821v1 4197611 33 + 12320365 gctggcaa---------agatgaagaaat--ta-tcattcgtaca i colAng1.NW_012120821v1 I 1 C 0 s calJac3.chr3 145659702 35 + 190850796 gctggcaa---------agatgaagaaactata-ccattcacaca i calJac3.chr3 I 1 C 0 s saiBol1.JH378162 14569621 35 + 15139346 gctggcaa---------agatgaagaaactata-ccattcataca i saiBol1.JH378162 I 1 C 0 s cebCap1.NW_016107603v1 395755 35 + 3802414 gttggcaa---------agatgaagaaactata-acattcataca i cebCap1.NW_016107603v1 I 1 C 0 s aotNan1.NW_018493494v1 9755112 35 + 11631747 gctggcga---------agatgaagaaactata-ccattcataca i aotNan1.NW_018493494v1 I 1 I 321 s canFam3.chr13 21703787 44 - 63241923 actggcaagaaatatatggatgatgaaatcaca-tcattcatata i canFam3.chr13 I 1 C 0 s dasNov3.JH575793 115215 36 + 255898 gctgacaa---------gaattcagaaactagattcattaaaata i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=24752.000000 s hg38.chr9_KI270719v1_random 140293 2 + 176845 tt s panTro5.chr4 86969422 2 + 194502333 tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745769 2 + 195804263 tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 32045 2 + 36344 tt i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539638 2 + 85365473 tt i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145385642 2 - 190429646 tt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144411088 2 - 189454096 tt i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3524389 2 + 39453387 tt i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1146884 2 + 25348628 tt i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5156153 2 + 48547382 tt i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 60261 2 + 130402 tt i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4197644 2 + 12320365 tt i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145659737 2 + 190850796 tt i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14569656 2 + 15139346 tt i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 395790 2 + 3802414 tt i cebCap1.NW_016107603v1 C 0 I 322 s canFam3.chr13 21703831 2 - 63241923 tt i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 115251 2 + 255898 tt i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e aotNan1.NW_018493494v1 9755147 321 + 11631747 I a score=21381.000000 s hg38.chr9_KI270719v1_random 140295 4 + 176845 attt s panTro5.chr4 86969424 4 + 194502333 gttg i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745771 4 + 195804263 gttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 32047 4 + 36344 attt i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539640 4 + 85365473 gtta i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145385644 4 - 190429646 gcta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144411090 4 - 189454096 gcta i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3524391 4 + 39453387 gcta i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1146886 4 + 25348628 gcta i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5156155 4 + 48547382 gcta i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 60263 4 + 130402 gcta i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4197646 4 + 12320365 gcta i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145659739 4 + 190850796 gtta i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14569658 4 + 15139346 gtta i saiBol1.JH378162 C 0 I 312 s canFam3.chr13 21703833 4 - 63241923 gttg i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 115253 4 + 255898 attg i dasNov3.JH575793 C 0 I 3 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e aotNan1.NW_018493494v1 9755147 321 + 11631747 I e cebCap1.NW_016107603v1 395792 322 + 3802414 I a score=13600.000000 s hg38.chr9_KI270719v1_random 140299 1 + 176845 g s panTro5.chr4 86969428 1 + 194502333 g i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745775 1 + 195804263 g i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 32051 1 + 36344 g i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539644 1 + 85365473 g i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145385648 1 - 190429646 g i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144411094 1 - 189454096 g i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3524395 1 + 39453387 g i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1146890 1 + 25348628 g i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5156159 1 + 48547382 g i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 60267 1 + 130402 g i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4197650 1 + 12320365 g i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145659743 1 + 190850796 g i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14569974 1 + 15139346 g i saiBol1.JH378162 I 312 C 0 s cebCap1.NW_016107603v1 396114 1 + 3802414 g i cebCap1.NW_016107603v1 I 322 C 0 s canFam3.chr13 21703837 1 - 63241923 g i canFam3.chr13 C 0 I 3 s dasNov3.JH575793 115260 1 + 255898 g i dasNov3.JH575793 I 3 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e aotNan1.NW_018493494v1 9755147 321 + 11631747 I a score=83371.000000 s hg38.chr9_KI270719v1_random 140300 7 + 176845 aattgta s panTro5.chr4 86969429 7 + 194502333 aattgta i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745776 7 + 195804263 aattgta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 32052 7 + 36344 aattgta i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539645 7 + 85365473 aattgta i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145385649 7 - 190429646 aattgta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144411095 7 - 189454096 aattgta i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3524396 7 + 39453387 aattgta i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1146891 7 + 25348628 aattgta i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5156160 7 + 48547382 aattgta i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 60268 7 + 130402 aattgta i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4197651 7 + 12320365 aattgta i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145659744 7 + 190850796 aactgta i calJac3.chr3 C 0 I 313 s saiBol1.JH378162 14569975 7 + 15139346 aattgta i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 396115 7 + 3802414 aattgta i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9755468 7 + 11631747 aattgta i aotNan1.NW_018493494v1 I 321 C 0 s canFam3.chr13 21703841 7 - 63241923 aaccaca i canFam3.chr13 I 3 C 0 s dasNov3.JH575793 115261 7 + 255898 aaatgca i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=9693761.000000 s hg38.chr9_KI270719v1_random 140307 952 + 176845 aaatgttataatactctgg-aaataatttatcagtttctttaaaaa-ctaaacatatat-ttataataagatccagc-aattgcacacctggaaatttatctaagagaaatgaaaacctatatgc-------gatc--tttaatatctttcatagcacctttaattctaacagag-aaaaactggaaacatccaagatg---ttggagaggtgaatggttgaataaactgtggtatatctatatgattaaatactacccagaaattaaaaagtatatact-----------------------------------------------tttgaca------------------------------------------------------catgcaataacttgcattgatctgaagggcattatgcttagtg---aaaaaaa-gcaaata--tcaaaaggacacatggcatattatttcatgtatataactttaataaaataacatacatatagaaaacagattagtgatttccagaggttagtgatg--gtatgggaatgtgagatgaa--tatggctataaaatgtgaggaagacacttttag------------tgatggaagagttctgtaacttaattgtaata-----atggtcac-attaatcaacac--gtgataaaataggc----atagacctatgaattcacattgtataaatgtc-aatgcctggtcttgatattgtacta-aattatacgagatgtaa-----------------------ctcttgaaataaactgtgtagaatagtacacgagacct-----ct---ctgtatttgaaactccctatggatctatgatcttttcaaaata-aaaa----gct--AAAAAATGCTAAGTGTTCAATAAATAAAA----TAGTAACTGTATTTTATCCAATTCTTACCATATAAaa------atgcttcacatacattaactcatacaattcaatctatagcaggatcacattga---tgccattattagtcctaatttatagcctagtagcttgttcaaggtcacatagctaataggaggaagggttatgattttaatccaagcaa-ccagctccagagaatgtgctaccaacTGACACATCACA s panTro5.chr4 86969436 948 + 194502333 aaatggtataatactctgg-acataacttatcagtttctttaaaaa-ctaaacatatat-ttacaatatgacccagc-aattgcactcctggaaatttgtctcagagaaatgaaaacctgtac------------------attatctttcatagcacctttaattctaatagag-gaaaactggaaacatacaaaatg---ttagacagatgaatggttaaataaactgtggtatatccatatggtgaaatactacccagaaat-aaaaagaatatatt-----------------------------------------------tttgaca------------------------------------------------------catgcaataacttgcatagatctgaaggacactatgcttagtg---aaaaaaaagccaata--tcaaaaggtcacataatatattatttcatgtatataactttaataaaataacatacatatagaaaacagattagtgatttccagaggttagtgata--gtaggggaatgtgagatgta--tgtgactataaaatgtgaggaagatatttttag------------tgatggaagagttctgtaacttaattgtaata-----atggtcac-attaaccaatacatgtgataaaattgac----atagacctacacattcatattctaccagtatc-aatgcctggtcttgatattgtacta-aattatacaagatgtaa-----------------------ctattggaagaaactgtgtagaatggcacatgagactt-----ct---ctgtatttaaaacttcctgtggatctatgatcttttcaaaata-aaaa----gct--AAAAAATGTTAAGTGTTCAATAAATAAAA-CAGTAGTAACTACATTTTATCTAATTCTTACCATATAAAG------ATGCTTCACACACATTAACTCATACAATTCAATCTATAGCAGGATCATATTAA---TGCCATTATTATTACTAACTTATAGCCTagtagcttgctcaaggtcatatagctaatatgaggaagggttacaattttaatcccagcaa-ccagctccagaggatgtgctcccaatcaacacatcaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 87745783 948 + 195804263 aaatggtatagtactctgg-acataacttatcagtttctttaaaaa-ctaaacatatat-ttacaatatgacccagc-aattgcactcctggaaatttatctcagagaaatgaaaacctgtac------------------attatctttcatagcacctttaattctaatagag-gaaaactggaaacatacaaaatg---ttagacagatgaatggttaaataaactgtggtatatccatatggtgaaatactacccagaaat-aaaaagaatatatt-----------------------------------------------tttgaca------------------------------------------------------catgcaataacttgcatagatctgaaggacactatgcttagtg---aaaaaaaagccaata--tcaaaaggtcacataatatattatttcatgtatataactttaataaaataacgcacatatagaaaacagattagtgatttccagaggttagtgata--gtaggggaatgtgagatgta--tgtgactataaaatgtgaggaagatatttttag------------tgatggaagagttctgtaacttaattgtaata-----atggtcac-attaaccaatacatgtgatagaattgac----atagacctacacattcatattgtaccagtatc-aatgcctggtcttgatattgtacta-aattatacaagatgtaa-----------------------ctattggaagaaactgtgtagaatggcacatgagactt-----ct---ctgtatttaaaacttcctgtggatctatgatcttttcaaaata-aaaa----gct--AAAAAATGTTAAGTGTTCAATAAATAAAA-CAGTAGTAACTACATTTTATCTATTTCTTACCATATAAAG------ATGCTTCACACACATTAACTCATACAATTCAATCTATAGCAGGATCATATTGA---TGCCATTATTATTACTAACTTATAGCCTagtagcttgctcaaggtcatatagctaatatgaggaagggttacaattttaatcccagcaa-ccagctccagaggatgtgctcccaatcaacacatcaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 32059 951 + 36344 aaatgttataatactctgg-aaataatttatcagtttctttaaaaa-ctaaacatatat-ttataataagatccagc-aattgcacccctggaaatttatctaagagaaatgaaaacctatatgt-------gatc--tttaatatctttcatagcacctttaattctaacagag-aaaaactggaaacatccaagatg---ttggacaggtgaatggttgaataaactgtggtatatccatatgattaaatactacccagaaataaaaaagaatatact-----------------------------------------------tttgaca------------------------------------------------------catgcaataacttgcatagatctgaagggcattatgcttagtg---aaaaaaa-gcaaata--tcaaaaggacacatggcatattatttcatgtatataactttaataaaataacatacatatagaaaacagattagtgatttccagaggttagtgatg--gtatgggaatgtgagatgaa--tatggctataaaatgtgaggaagacacttttag------------tgatggaagagttctgtaacttaattgtaata-----atggtcac-attaatcaacac--gtgataaaattggc----atagacctatgaattcacattgtataaatgtc-aatgcctggtcttgatattgtacta-aattat-caagatgtaa-----------------------ctcttgaaataaactgtgtagaatagtacacgagacct-----ct---ctgtatttgaaactccctatggatctatgatcttttcaaaata-aaaa----gct--AAAAAATGCTAAGTGTTCAATAAATAAAA----TAGTAACTGTATTTTATCCAATTCTTACCATATAAaa------atgcttcacatacattaactcatacaattcaatctatagcaggatcatattga---tgccattattagtcctaatttatagcctagtagcttgttcaaggtcacatagctaataggaggaagggttatgattttaatccaagcaa-ccagctccagagaatgtgctaccaactgacacatcaca i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42539652 940 + 85365473 aaatggtataatactctgg-gcataacttatcagtttctttaaaaa-gtaaacatatat-ttacaatatgacccagc-aattgtactcctggaaatttatctcagagaaatgaaaacctgtac------------------attatctttcatagcacctgtaattctaatagag-gagaactggaaacatacaaaatg---ttggacagatgaatggttaaataaactgtggtatatccatatgatgaaatactacccagaaataaaaaagaatatact-----------------------------------------------tttgaca------------------------------------------------------catgcaataacttgcatagatctgaaggacactatgcttagtg---aagaaaaagccaata--tcaaaagttcgcataatatattatttcacgtat---------ataaaataacatacatatagaaaacagattagtgatttccagaggttagtgatg--gtagggaaatgtgagatgta--tgtgactataaaatgtgaggaagatatttttag------------tgatggaagtgttctgtaacttaattgtaata-----atggtcac-attaaccaacacatgtgataaaattgac----atagacctacgcaatcatattgtaccaatatc-aatgcctggtcttgatattgtacta-aattatataagatgtaa-----------------------ctattggaagaaactgtgtagaatggtacatgagacct-----ct---ctgtatttgaaacttcctatggatctactatcttttcaaaata-aaaa----gct--AAAAAATGCTAGGTGTTCAGTAAATAGAA-Cagtagtaactaccttttatctaattcttaccatataaag------atgcttcacatacattaactcatacaattcaatctacagcaggatcatattga---tgccattattattactaacttacagcctggtagcttgctcaaggtcatatagctaatatgaggaagggttacgattttaatccaagcaa-ccagctccagaggatgtgctcccaatcGACACATCGCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145385656 948 - 190429646 aaatggtattacgctctgg-aactaactcatcagtttcttttaaaa-ctaaacatatat-tcacaatatgacccagcaaattgcactcctggaaatttatctcagagaaatgaaaacctgtat------------------gtgatcattcatagcacctttaattctaatagag-gaaaactggaaacatccaaaatg---ttagacagatgaatggttaaataaactgtggtatatccatatgatgaaatactacccagaaataaaaaagaatatagt-----------------------------------------------tttgaca------------------------------------------------------catacaataagtcgcatagatctgaaggacattatgcttagtg---aaaaaaaagccaata--tcaaaaggtcacatagtatattatttcatgtatataactttaataaaataacatacatataaaaaacagattagtgatttccagaggttagtgatg--gtagggaaatgtgagatgaa--tgtgactataaaatgtgaggaagatatttttag------------tgatggaagagttctgtagcttaattgtaata-----atggtcac-attaaccaacac--gtgataaaattgac----atagacctatacattcatattgtaccagcatc-aatgcctggtcttgatattgtacta-aattatacaagatgtaa-----------------------ctcttagaagaaactgtacagaatggtacatgagacct-----ct---ctttatatgaaacttcctatggatcaatgatctttttaaaata-aaaa----gct--AAAAAATGCTAGGTGTTCAATAAATATAA-CAGCAGTAATTACATTTTGTCCAATTCTTACCATATAAaa------atgcttcacatacattcactcatacaattcaatctatagcaggatcatattga---tgccattattattcctaacttatagcctagtagcttgttccaggtcacatagctaatatgaggaagggttacgattttaatccaagcaa-ccagctccagacaatgtgctcccaatcgacacatcacg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144411102 948 - 189454096 aaatggtattacgctctgg-aactaactcatcagcttcttctaaaa-ctaaacatatat-tcacaatatgacccagcaaattgcactcctggaaatttatctcagagaaatgaaaacctgtat------------------gtgatcattcatagcacctttaattctaatagag-gaaaactggaaacatccaaaatg---ttagacagatgaatggttaaataaactgtggtatatccatatgatgaaatactacccagaaataaaaaagaatatagt-----------------------------------------------tttgaca------------------------------------------------------catacaataagtcgcatagatctgaaggacattatgcttagtg---aaaaaaaagccaata--tcaaaaggtcacatagtatattatttcatgtatataactttaataaaatgacatacatatagaaaacagattagtgatttccagaggttagtgatg--gtagggaaatgtgagatgaa--tgtgactataaaatgtgaggaagatatttttag------------tgatggaagagttctgtagcttaattgtaata-----atggtcac-attaaccaacac--gtgataaaattgac----atagacctatacattcatattgtaccagcatc-aatgcctggtcttgatattgtacta-aattatacaagatgtaa-----------------------ctcttagaagaaactgtgcagaatggtacatgagacct-----ct---ctttatatgaaacttcctatggatcaatgatctttttaaaata-aaaa----gct--AAAAAATGCTAGGTGTTCAATAAATATAA-CAGCAGTAATTACATTTTGTCCAATTCTTACCATATAAAA------ATGCTTCACATACATTCACTCATACAATTCAATCTATAGCAGGATCATATTGA---TGCCATTATTATTCCTAACTTATAGCCTagtagcttgttccaggtcacatagctaatatgaggaagggttacgattttaatccaagcaa-ccagctccagacaatgtgctcccaatcgacacatcacg i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3524403 948 + 39453387 aaatggtattacgctctgg-aactaactcatcagtttcttttaaaa-ctaaacatatat-tcacaatatgacccagcaaattgcactcctggaaatttatctcagagaaatgaaaacctgtat------------------gtgatcattcatagcacctttaattctaatagag-gaaaactggaaacatccaaaatg---ttagacagatgaatggttaaataaactgtggtatatccatatgatgaaatactacccagaaataaaaaagaatatagt-----------------------------------------------tttgaca------------------------------------------------------catacaataagtcgcatagatctgaaggacattatgcttagtg--aaaaaaaaagccaata--tcaaaaggtcacatagtatattatttcatgtatataactttaataaaataacatacatatagaaaacagattagtgatttccagaggttagtgatg--gtagggaaatgtgagatgaa--tgtgactataaaatgtgaggaagatatttttag------------tgatggaagagttctgtagcttaattgtaata-----atggtcac-attaatcaacac--atgataaaattgac----atagacctatacattcatattgtaccagcatc-aatgcctggtcttgatattgtacta-aattatacaagatgtaa-----------------------ctcttagaagaaactgtgcagaatgatacatgagacct-----ct---ctttatatgaaacttcctatggatcaatgatctttttaaaata-aaaa----gct--AAAAAATGCTAGGTGTTCAATAAATATAA-CAGCAGTAATTACATTTTGTCCAATTCTTACCATATAAaa------atgcttcacatacattcactcatacaattcaatctatagcaggatcatattga---tgccattattattcctaatttacagcctagtagcttgttcaaggtcacatagttaataggaggaagggttatgattttaatccaa-taa-ccagctccagaggatgtgctcccaatcgacacatcaca i macNem1.NW_012011022v1 C 0 I 42 s cerAty1.NW_012002843v1 1146898 948 + 25348628 aaatggtattatgctctgg-aactaactcatcagtttcttttaaaa-ctaaacatatat-tcacaatatgacccagcaaattgcactcctggaaatttatctcagagaaatgaaaacctgtat------------------gtgatcattcatagcacctttaattctaatagag-gaaaactggaaacatccaaaatg---ttagacagatgaatggttaaataaactgtggtatatccatatgatgaaatactacccagaaataaaaaagaatatact-----------------------------------------------tttgaca------------------------------------------------------catacaataagttgcatagatctgaaggacattatgcttagtg---aaaacaaagccaata--tcaaaaggtcacatagtatattatttcatgtatataactttaataaaataacatacatatagaaaacagattagtgatttccagaggttagtgatg--gtagggaaatgtgagatgaa--tgtgactataaaatgtgaggaagatatttttag------------tgatggaagagttctgtagcttaattgtaata-----atgctcac-attaactaacac--gtgataaaattgac----atagacctgtacattcatattgtactagcatc-aatgcctggtcttgatattgtacta-cattatacaagatgtaa-----------------------ctcttagaagaaactgtgcagaatggtacatgagacct-----ct---ctttatatgaaacttcctatggatcaatgatctttttaaaata-aaaa----gct--AAAAAATGCTAGGTGTTCAATAAATATAA-CAGCAGTAATTACATTTTATCCAATTCTTACCATATAAaa------atgcttcacatacattcactcatacaattcaatctatagcaggatcatattga---tgccattattattcctaacttatagcctagtaacttgttccaggtcacatagctaatatgaggaagggttacgattttaatccaagcaa-ccagctccagacaatgtgcttccaatcgacacatcacg i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5156167 953 + 48547382 aaatggtattacactctgg-aactaactcatcagtttcttttaaaa-ctaaacatatat-tcacaatatgacccagcaaattgcactcctggaaatttatctcagagaaatgaaaacctgtat------------------gtgatcattcatagcacctttaattctaatagag-gaaaactggaaacatccaaaatg---ttagacagatgaatagttaaataaactgtggtatatccatatgatgaaatactacccagaaataaaaaagaatatact-----------------------------------------------tttgaca------------------------------------------------------catacaataagtcacatagatctgaaggacattatgcttagtgaaaaaaaaaaagccaata--tcaaaaggtcacatagtatattatttcatgtatataactttaataaaataacatacatatagaaaacagattagtgatttccagaggctagtgatg--gtagggaaatgtgagatgaatgtgtgactataaaatgtgaggaagatatttttag------------tgatggaagagttctgtagcttaattgtaata-----atggtcac-attaaccaacac--gtgataaaattgac----atagacctatacattcatattgtaccagcatc-aatgcctagtcttgatattgtacta-aattatacaagatgtaa-----------------------ctcttggaagaaactgtgcagaatggtacatgagacct-----ct---ctttatatgaaacttcctatggatcaatgatctttttaaaata-aaaa----gct--AAAAAATGCTAGGTGTTCAATAAATATAA-CAGCAGTAACTACATTTTATCCAATTCTTACCATATAAAA------ATGCTTCACATACATTCACTCATACAATTCAATCTATAGCAGGATCATGTTGA---TGCCATTATTATTCCTAACGTATATCCTagtagcttgtttcaggtaacatagctaatatgaggaagggttacgattttaatccaagcaa-ccagctccagacaatgtgctcccaaTTGACACATCACG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 60275 948 + 130402 aaatggtattacgctctgg-aactaactcatcagtttcttttaaaa-ctaaacatatat-tcacaatatgacccagcaaattgcactcctggaaatttatctcagagaaatgaaaacctgtat------------------gtgatcattcatagcacctttaattctaatagag-gaaaactggaaacatccaaaatg---ttagacagatgaatggttaaataaactgtggtatatccatatgatgaaatactacccagaaataaaaaagaatatact-----------------------------------------------tttgaca------------------------------------------------------catacaataagtcgcatagatctgaaggacattatgcttagtg---aaaacaaagccaata--tcaaaaggtcacatagtatattatttcatgtatataactttaataaaataacatacatatagagaacagattagtgatttccagaggttagtgatg--gtagggaaatgtgagatgaa--tgtgactataaaatgtgaggaagatatttttag------------tgatcgaagagttctgtagcttaattgtaata-----atggtcac-attaaccaacac--gtgataaaattgac----atagacctgtacattcatattgtaccagcatc-aatgcctggtcttgatattgtacta-aattatacaagatgtaa-----------------------ctcttagaagaaactgtgcagaatggtacatgagacct-----ct---ctttatgtgaaacttcctatggatcaatgatctttttaaaata-aaaa----gct--AAAAAATGCTAGGTGTTCAATAAATATAA-CAGCAGTAATTACATTTTATCCAATTCTTACCATATAAaa------atgcttcacatacattcactcatacaattcaatctatagcaggatcatattga---taccattattattcctaacttatagcctagtagcttgttccatgtcacatagctaatatgaggaagggttacgattttaatccaagcaa-ctagctccagacaatgtgctcccaatcgacacatcacg i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4197658 949 + 12320365 caatggtattacgttgtga-aactaactcatcagtttctttaaaaa-ctaaacatatat-tcacaatatgacccagc-aattgcactcctggaaatttatctcagagaaatgaaaacctgtat------------------gtgatcattcatagcacctttaattctaatagag-gaaaactggaaacatccaaaatg---ttggacagatgaatggttaaacaaactgtggtatatccatatgatgaaatactacccagaaataaaaaagaatatact-----------------------------------------------tttgaca------------------------------------------------------catacaataactcacata-atctgaaggacattatgcttagtg---aaaaaaaatccaata--tcaaaaggtcacatagtatattattttatgtatataactttaataaaataacatacatatagaaaacagattagtgatttccagatgttagtgatg--gtagggaaatgtgagatgaa--tgtgactataaaatgtgaggaagatatttttag------------tgatggaagaattctgtagcttaattgtaata-----atggtcac-attaaccaacac--gtgacaaaattgac----atagacctatacattcatattgtaccagcatc-aatgcctggtcttgatattgtacaa-aattatacaagatgtaa-----------------------ctcttggaagaaactgtgcagaatggtacataagacct-----ct---ctttatatgaaacttcctatggatctatgatctttttaaaata-aaaa----gct--AAAAAATGCTAGGTGTTCAATAAATATAA-CAGCAGTAACTACATTTTATCCAATTCTTAC---ATAAAATAtaagatgcttcacatacattaactcatacaattcaatctgtagtaggatcatattga---tgccattattattcctaacttatagcctagtagcttgttccaggtcacatagctaatatgaggaagggttacgattttaatccaagcaa-ccaactccagacaatgtgctcccaattgacacatcaca i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145660064 950 + 190850796 aaatgatataataccctgg-aactaattcatcagtttctttaaaaa-ctaaacatacac-ttaccatatgacccagc-aattgcactcctggaaatttatctcagagaaatgaaaacctaaat--------------------gatctttcatagcacttttaattctaacagag-aaaaactggaaacatccaaaatg---tgggacagatgaatagttgaataaactggggcatatccatatgatgaaatactatccagaaacaaagaggaatatacc-----------------------------------------------tttgaca------------------------------------------------------catgcaataacttacatagagctgaagggcattatgcttagtg-------aaaagccaatc--ctaaaaagtcacatagtatattattttatgtacataactttaataaaataacatacagatagaaaacagattagtgatttccagagattagtgatg--gtaggggaatgtgggatgaa--tgtgactataaaatgtgaggaagacatttttag------------tgatagaagaattctgtaacttaattgaaata-----ttggtcac-attaatcaacacatgtgataaaattgacatagatagacctgtgcatttgcactgtaccagtatc-aatgcttggtcttgatattgtacta-aattatacaagatgtaa-----------------------ctcttggaagaaactgcatagaatggcacataagacct-----ct---ctacatctgaaatttcctatggatctatgatcttttccaaaaa-aaaaAAACCCT--AAAAAATGCTAAGTGTTCAATAAATAAAA-TAGTAGTAA-TACATTGTATCCAATTCTTACCACATAAaa------atgcatcacatatattaactcatataattcaatctatagcaaaatcatattga---tgccattattattcctaatatataggctagtaccttgttcaaggccatatagctaatgtgaggaagagttattatttcagtccaagcaa-cgagctccagaggatgtgctcccaaTAGGCACACCACT i calJac3.chr3 I 313 C 0 s saiBol1.JH378162 14569982 953 + 15139346 aaatgatataata-cctgg-aactaattcatcagtttctttaaaaa-ctaaacatatac-ttaccatatgacccagc-aattgcactcctggaaatttatctcagagaaataaaaacctaaat--------------------gatctttcacggcacttttaattctaatagag-aaaaactggaaacatccaaaatg---ttggacaaatgaatggttaaataaactatggtatatccatatgatgaaatactacccagaaataaaaaagaatatact-----------------------------------------------tttgaca------------------------------------------------------catgcaataacttacatagacctgaagggcattatgcttagtg--ggaaaaaaagccaatc--tgagaatttcacatagtatattatttcatgtatataactttaataaaataatatacagatagaaaacagattactgatttccagagattagtgatg--gtaggggaatgtgggatgaa--tgtgactataaaatgtgaggaagacatttttag------------tgatagaagaattctgtaactgaattgtaata-----ttggtcac-attaatcaacacatgtgataaaattgacatagaTAGACCTGCGCATTCACactgtaccagtatc-aatgcttgggctttatattgtacta-aattatacaagatgtaa-----------------------ctcttggaagaaactgtatagaatggcacataagacct-----ct---ctatatctgaaatttcctatggatctatgatctttttttaaaa-aaaaag--ctA--AAAAAATGCTAAGTGTTCAATAAATAAaa-tagtagtaactacattttatccaatccttaccacacaaaa------atccatcacatacattaactcatataattcaatctatagcagaatcctattga---tgccattattattcctaatatataggctagtaccttgttcaaggccacatagctaatatgaggaagggttattacttcagtacaagcaa-ccagctccagaggatgtgctcccaataggctCACCACT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 396122 951 + 3802414 aaatgatataata-cctga-aactaattcatcagtttctttaaaaa-ctaaaaatatgc-ttaccatataacccagc-aattgcactcctggaaatttatctcagagaaatgaaaacccaaat--------------------gatctttcacagcacttttaattctaatagagaaaaaactggaaacatccaaaatg---ttggacagatgaatggttaaataaaccatggtatatccatatgatgaaatactacccagaaataaaaaagaatatact-----------------------------------------------tttgaca------------------------------------------------------catgcaataacttacatagatctgaagggcattatgcttagtg--ggaaaaaaagccaatc--tgaaaaggtcacatagtatattatttcatgtatataactttaataaaataacatacagatagaaaacagattagcgatttccagaggttagtgatg--gtaggggaatgtgagatgaa--tgtgactataaaatgtgaggaagacatttttag------------tgatagaagaattctgtaacttaattgtaata-----ttggtcgc-attaatcaacacatgtgataaaattgac----atagacctGtgcatttgcactgtaccactatc-aatgcttggtcttgatattgtacta-aattatacaagttgtaa-----------------------ctcttggaagaaaccatatagaatggcacataagacct-----ct---ctatatctgaaatttcctatggatctatgatctttaaaaaaaa-aaaaacagctt---aaaaaTGCTAAGTGTTCAGTAAATAAAA-TAGTAGTAACTACATTTTATCCAATTCTTACCACATAAAA------ATGCGTCACATACATTAATTCATATGATTCAATCTATAGCAGAATCATATTGA---TGACATTATTATTCCTAATATACaggctagtaccttattcaagggcacatagctaatacgaggaagggttattatttcagttcaagcaa-ccagctccagaggatgtgctcccaaTACGCACACCGCT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9755475 964 + 11631747 aaatgatataata-cctag-aactaattcatcagtttctttaaaaa-ctaaacatatac-ttaccatatgacccagc-aattgaactcctggaaatttatctcagagaaatgaaaacctaaat--------------------gatacttcacagcacttttaattctaatagag-aaaaactggaaacatccaaaatg---ttggacagatgaatggttaaataaactgtggtatatccatatgatgaaatactacccagaaataaaaaagaatatact-----------------------------------------------cttgaca------------------------------------------------------catgcaataacttacatagatctgaagggcattatgcttagtg--aaaaaaaaagccaatc--tcaaaaggtcacattatatattatttcatgtatataactttaataaaataacatacagatagaaaacagattagtgatttccagagattagtgatt--gtaggggaatgtggaatgaa--tgtgactataaaatgtgaggaagacatttttagaatttttagaatagagagaagaattctgtaacttaattgtaata-----ttggtcac-attaatca--acatatgataaaattgacatagaTAGACCTGTGCATTCGTactgtaccagtatc-aatgcctggtcttgatattgtacta-aattatacaagatgtaa-----------------------ctcttggaagaaac-gtatagaatggcacataagacct-----ct---ctacatctgaaatttcctatggatctatgatcttttcaaaaaa-aaaaAAAAGCT--TAAAAATGCTAAGTGTTCAATAAATAAAA-TAGTAGTAACTACATTTTATCCAATTCTTACCACATAAaa------atgcatcacatacattaactcatataattcaatctatagcagaatcatattga---tgccattattattcctaatatataggttagtaccttgtttaaggtcacatagctaatacgaggaagggttattatttcaattcaagcaa-ccagctccggaggatgtgctcccaataggcacaccact i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21703848 1063 - 63241923 aactggtacagcactctggaaaacagtttggcaatttctttaaaaa-actaaaacatatgctaaaatactacccagc-aattgtacttccggatatttatcccaaagaaataaaaatctgcac------------------agaatcttccataccagctttaattttaaaagcc-caaggctggaaacaaccaaaatg---ttggatatgtgaatggttaaacaaattgtggtacatctatatgatggaataccactcagcaataaaaagaaataaactgtaatgtatagaattgtcgaatcattatattgtatactcaaaagtaattcaacactctatgttaatgatacttcaattaaaattttttgaaggaatagattaccgaaccatgcagtaaactggatggatcttaaagg---tatgctgagta--ggggaaaaaaataata----aaaagttctcata----------tcccatatgtaacttttagaaattaatatg-aggtaaaaaacatattagtgatttccacgggttagggatgatgtaggg---tttggggtggg--tgtgactatacagcattagggagagcatcatgg------------tgatggaacagttctatatcttgattgcaagatcaagatgatcttgatgaatttacacatatga-acaactgag----gtagaactatgtgcacacattgtgcctatgtcaaattcctgttactgatattttattctaatcatagaaggtgtaaaaaaaaaaaaaaagaaggtgaatctactggaggaaactaggta-aagggaatatgaaatct-----gtgtaatacatctgaaatttcctgtgactctacaatgatttcaaaata-aaaa----gattaaAAAAATGTT--GTGTTCAATAAACAA------CTatagctaaatt-tatagaatgtgtactgtatgcga------atattttatatacattaattcatgtataatgatcaataataggatcatattgacactgctgttatcatccctaatttacaacctagtagtttactctaagtcacgcagctgctatggggaagactcacaattttaagccaagcagtttggcttcagagaatgtgttcttaatcacgacact--- i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 115268 935 + 255898 aagtggaatagaaagggaa-aattgaat-ggcagtttctttaaaagtctaaacatacat-ttaccacatgactcagc-aattatactcctgg-catttgtctcagagaaatgaaaacgtatgtctacacaaaaatcagtgcactattattcataatagcttt-attttaaccgta-aaaaactgtaaacaactaatataccccttaatagatgaatagttaagcaaactgtgttctatctacactaaggaatac-actcagcaataaaaaggaacacaac-----------------------------------------------tattaca-----------------------------------------------------acatataacaatttgaatgaatctcaaggccattttgctgagtg-----aaaaaggccaatatatcaaaagattacatattacatgattccatttatagaattttcttagaa----------atggaaaacagaaatgtagatgacagaggttaaagaag--at--gggaatg-ggaattga--tgtgactataactcacaagggaagatcttgtag------------taatggactagtt-tgtaacattattgtgtgg-----ctgttaca-aagaacctgcacatggaaataaaatggc----atagaactataaacacatgtcatgccaatgtcaaattcctgtttttaatattgtacaataattatatataatataa-----------------------ccattgggggaagcagaataaaa-ggtatatggaactttcctgtt---ctatatttgaaactacttgtgactctataattaattcaaaatataaaa----ttt--taaAAGTAATAAATGTTAAATAAAGAATATTagtaatagctaaattttctacagcatttactatatgcaa------atgctttacatacattgtctcatataacccagtcaataactagggagtataaa---tactattattctccctaattgatggctaagtggcttgcccaagatcaaacagctagaatggggaggagccatgattgcaacctagg----ttggctctagagca------------------------ i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=193049.000000 s hg38.chr9_KI270719v1_random 141259 20 + 176845 GCATTTCTC-AAAAATAATTC s panTro5.chr4 86970384 20 + 194502333 gtgtttctc-AAAAATAATTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 87746731 20 + 195804263 gtgtttctc-AAAAATAATTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33010 20 + 36344 gcgtttctc-AAAAATAATTC i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540592 20 + 85365473 GTGTTTCTC-ATTAATAATTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386604 20 - 190429646 gtgtttctc-AAAAATAATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412050 20 - 189454096 gtgtttctc-AAAAATAATTC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147846 20 + 25348628 gtgtttctc-AAAAATAATTC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157120 20 + 48547382 GTGTTTCTC-AAAAATAATTC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61223 20 + 130402 gtgtttctc-AAAAATAATTC i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4198607 20 + 12320365 gtgtttctc-AAAAATAATTC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145661014 20 + 190850796 GTGTTTCTC-AAAAATAAATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14570935 20 + 15139346 GTGTTTCTC-AAAAATATCTC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 397073 20 + 3802414 GTGTTTCTC-AAAAATATTTC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9756439 20 + 11631747 gtgtttctc-AAAAATAATTC i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21704911 21 - 63241923 atgctTCACAAAAAATGATTC i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 116203 20 + 255898 gcggttctt-aacaagggctc i dasNov3.JH575793 C 0 I 276 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=9090.000000 s hg38.chr9_KI270719v1_random 141279 1 + 176845 T s panTro5.chr4 86970404 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 87746751 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33030 1 + 36344 T i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540612 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386624 1 - 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412070 1 - 189454096 T i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147866 1 + 25348628 T i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157140 1 + 48547382 T i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61243 1 + 130402 T i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4198627 1 + 12320365 T i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145661034 1 + 190850796 C i calJac3.chr3 C 0 I 3994 s saiBol1.JH378162 14570955 1 + 15139346 T i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 397093 1 + 3802414 T i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9756459 1 + 11631747 T i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21704932 1 - 63241923 T i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=315893.000000 s hg38.chr9_KI270719v1_random 141280 40 + 176845 ggatggaaggaaagaagggagttaaggaaggagagagaga s panTro5.chr4 86970405 40 + 194502333 ggatggaaggaaagaagggaggtagggaaggagacagaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 87746752 40 + 195804263 ggatggaaggaaagaagggaggtagggaaggagacagaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33031 39 + 36344 ggatggaaggaaagaa-ggagttaaggaaggagagagaga i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540613 40 + 85365473 ggatggaaggaaagaagggaggtagggaaggagacagaga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386625 40 - 190429646 ggatggaaggaaagaagggaggtagggaaggagacagaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412071 40 - 189454096 ggatggaaggaaagaagggaggtagggaaggagacagaga i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147867 40 + 25348628 Tgatggaaggaaagaagggaggtagggaaggagacagaga i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157141 40 + 48547382 ggatggaagcaaagaagggaggtagggaaggagacagaga i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61244 40 + 130402 ggatggaaagaaagaagggaggtagggaaggagacagaga i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4198628 40 + 12320365 ggatggaaggaaagaacggaggtaggaaaggagacagaga i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145665029 40 + 190850796 ggagggaaggaaaggaagaagggaggaaggagggaaggaa i calJac3.chr3 I 3994 C 0 s saiBol1.JH378162 14570956 40 + 15139346 ggatggaaggaaagaacagacgtaggaaagaagagaggaa i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 397094 40 + 3802414 ggatgaaaggaaagaagggaagtaggaaagaagaggggaa i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9756460 40 + 11631747 ggatggaaagaaagaagggaagtagggaagaagagaggaa i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21704933 40 - 63241923 TGAATGAAGGAATAAATAGGATTTTTAAAAAAGAAACAGA i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=89083.000000 s hg38.chr9_KI270719v1_random 141320 14 + 176845 ag----------------gaaggaaggaag s panTro5.chr4 86970445 14 + 194502333 ag----------------gaaggaaggaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 87746792 14 + 195804263 ag----------------gaatgaaggaag i panPan2.chr4 C 0 I 77 s gorGor5.CYUI01002260v1 33070 14 + 36344 ag----------------gaaggaaggaag i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540653 30 + 85365473 aggaaagaagcacggaaagaaggaaggaag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386665 14 - 190429646 aa----------------gaaggaaggaag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412111 14 - 189454096 aa----------------gaaggaaggaag i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147907 6 + 25348628 aa------------------------gaaa i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157181 14 + 48547382 aa----------------gaaggaaggaag i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61284 14 + 130402 aa----------------gaaagaaagaag i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4198668 14 + 12320365 aa----------------gaaggaaggaag i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145665069 14 + 190850796 ag----------------gaaggaaggagg i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14570996 14 + 15139346 ag----------------gaaggaaggaag i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 397134 14 + 3802414 ag----------------gaaggaaggaag i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9756500 14 + 11631747 ag----------------gaaagaaggaaa i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=180638.000000 s hg38.chr9_KI270719v1_random 141334 41 + 176845 gaaggaaggaaggaagga--------------------------------------------------------aggaaggaaggaagggagggagg s panTro5.chr4 86970459 41 + 194502333 gaaggaaggaaggaagga--------------------------------------------------------aggaaggaaggaaggaaggaagg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33084 26 + 36344 -------gaagaagaaga--------------------------------------------------------aggaaggaaggaggg-------- i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540683 41 + 85365473 gaaggaaggaaggaagga--------------------------------------------------------aggaaggaaggaaagaaggaagg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386679 41 - 190429646 gaaggaaggaaggaagga--------------------------------------------------------aggaaggaaggaaggaaggaagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412125 41 - 189454096 gaaggaaggaaggaagga--------------------------------------------------------aggaaggaaggaaggaaggaagg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147913 41 + 25348628 gaaggaaggaaggaagga--------------------------------------------------------aggaaggaaggaaggaaggaagg i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157195 41 + 48547382 gaaggaaggaaggaagga--------------------------------------------------------aggaaggaaggaaggaaggaagg i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61298 97 + 130402 gaaggaaggaaggaaggaaagaaggaagggagggagggagggaaggaggaagggagagagggagggagggaaacaggaagggaggaaggaaggaagg i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4198682 41 + 12320365 gaaggaaagaaggaagga--------------------------------------------------------aggaagggagggagggagggagg i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145665083 23 + 190850796 gagggagggaaggaagga--------------------------------------------------------aggaa------------------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571010 23 + 15139346 gaaggaaggaaggaagga--------------------------------------------------------aggaa------------------ i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 397148 39 + 3802414 gagggagggagggaaaga--------------------------------------------------------aggaaggagggagggagggag-- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9756514 39 + 11631747 gaaggaaggagggaggga--------------------------------------------------------aggaaggaaggaggagggagg-- i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e rhiBie1.NW_016814732v1 81043 2505 + 665040 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=13827.000000 s hg38.chr9_KI270719v1_random 141375 3 + 176845 aag s panTro5.chr4 86970500 3 + 194502333 aat i panTro5.chr4 C 0 C 0 s nomLeu3.chr20 42540724 3 + 85365473 aag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386720 3 - 190429646 aag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412166 3 - 189454096 aag i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147954 3 + 25348628 aag i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157236 3 + 48547382 aag i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61395 3 + 130402 aag i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4198723 3 + 12320365 aag i colAng1.NW_012120821v1 C 0 C 0 s rhiBie1.NW_016814732v1 83548 3 + 665040 aag i rhiBie1.NW_016814732v1 I 2505 N 0 s cebCap1.NW_016107603v1 397187 3 + 3802414 gag i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9756553 3 + 11631747 gag i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e saiBol1.JH378162 14571033 0 + 15139346 C e calJac3.chr3 145665106 0 + 190850796 C e macNem1.NW_012011022v1 3525351 42 + 39453387 I e gorGor5.CYUI01002260v1 33110 0 + 36344 C a score=12322.000000 s hg38.chr9_KI270719v1_random 141378 3 + 176845 gaa s panTro5.chr4 86970503 3 + 194502333 gga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33110 1 + 36344 --a i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540727 3 + 85365473 gaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386723 3 - 190429646 gaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412169 3 - 189454096 gaa i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147957 3 + 25348628 gaa i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157239 3 + 48547382 gaa i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61398 3 + 130402 gaa i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4198726 3 + 12320365 gaa i colAng1.NW_012120821v1 C 0 I 1031 s cebCap1.NW_016107603v1 397190 3 + 3802414 gga i cebCap1.NW_016107603v1 C 0 I 354 s aotNan1.NW_018493494v1 9756556 3 + 11631747 gag i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e saiBol1.JH378162 14571033 0 + 15139346 C e calJac3.chr3 145665106 0 + 190850796 C e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=13211.000000 s hg38.chr9_KI270719v1_random 141381 3 + 176845 aga s panTro5.chr4 86970506 3 + 194502333 ggg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33111 3 + 36344 ggg i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540730 3 + 85365473 gga i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386726 3 - 190429646 gga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412172 3 - 189454096 gga i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147960 3 + 25348628 aga i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157242 3 + 48547382 gga i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61401 3 + 130402 gga i manLeu1.NW_012102858v1 C 0 C 0 s calJac3.chr3 145665106 3 + 190850796 gga i calJac3.chr3 C 0 I 7 s saiBol1.JH378162 14571033 3 + 15139346 gga i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9756559 3 + 11631747 aga i aotNan1.NW_018493494v1 C 0 I 6 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=128639.000000 s hg38.chr9_KI270719v1_random 141384 31 + 176845 aggaaggaaagaaggaaggaaagaaggaagg s panTro5.chr4 86970509 31 + 194502333 agggaagaaggaaagaaggaaagaagggagg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33114 31 + 36344 aggaaggaaagaaggaaggaaagaaggaagg i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540733 31 + 85365473 aggaaagaaggaaggaaggaaagaaggaagg i nomLeu3.chr20 C 0 I 67 s rheMac8.chr5 145386729 31 - 190429646 aggaaggaaggaaggaaggaaggaaggaagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412175 31 - 189454096 aggaaggaaggaaggaaggaaggaaggaagg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147963 31 + 25348628 aggaagggagggagggagggagggaggaagg i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157245 31 + 48547382 agagagggagggagggagggagggagggaaa i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61404 31 + 130402 aggaaggaaggaaggaaggaaggaaggaaag i manLeu1.NW_012102858v1 C 0 C 0 s calJac3.chr3 145665116 31 + 190850796 agggagggagggagggaggaaggaaggaaag i calJac3.chr3 I 7 C 0 s saiBol1.JH378162 14571036 31 + 15139346 aggaaggaaggaaggaaggaaggaagggagg i saiBol1.JH378162 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e aotNan1.NW_018493494v1 9756562 6 + 11631747 I e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=3146.000000 s hg38.chr9_KI270719v1_random 141415 4 + 176845 ctgt s panTro5.chr4 86970540 4 + 194502333 gagg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33145 4 + 36344 ctgg i gorGor5.CYUI01002260v1 C 0 C 0 s rheMac8.chr5 145386760 4 - 190429646 gagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412206 4 - 189454096 gagg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147994 4 + 25348628 gaga i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157276 4 + 48547382 cagt i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61435 4 + 130402 aagg i manLeu1.NW_012102858v1 C 0 C 0 s calJac3.chr3 145665147 4 + 190850796 gaag i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571067 4 + 15139346 gagg i saiBol1.JH378162 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e aotNan1.NW_018493494v1 9756562 6 + 11631747 I e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I e nomLeu3.chr20 42540764 67 + 85365473 I a score=27309.000000 s hg38.chr9_KI270719v1_random 141419 7 + 176845 aagggag s panTro5.chr4 86970544 7 + 194502333 gaagcag i panTro5.chr4 C 0 I 3 s gorGor5.CYUI01002260v1 33149 7 + 36344 aagggag i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540831 7 + 85365473 aagggag i nomLeu3.chr20 I 67 C 0 s rheMac8.chr5 145386764 7 - 190429646 gagggag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412210 7 - 189454096 gagggag i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1147998 7 + 25348628 gagggag i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157280 7 + 48547382 taggaag i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61439 7 + 130402 aagggag i manLeu1.NW_012102858v1 C 0 C 0 s calJac3.chr3 145665151 7 + 190850796 aagggag i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571071 7 + 15139346 aagggag i saiBol1.JH378162 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e aotNan1.NW_018493494v1 9756562 6 + 11631747 I e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=47239.000000 s hg38.chr9_KI270719v1_random 141426 11 + 176845 ggaggga-----------ggaa s panTro5.chr4 86970554 11 + 194502333 gaaggaa-----------ggaa i panTro5.chr4 I 3 C 0 s gorGor5.CYUI01002260v1 33156 11 + 36344 ggaggga-----------ggaa i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540838 22 + 85365473 ggagggagcaaagcagttggaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386771 11 - 190429646 ggaggga-----------ggga i rheMac8.chr5 C 0 I 1 s macFas5.chr5 144412217 11 - 189454096 ggaggga-----------ggga i macFas5.chr5 C 0 I 1 s cerAty1.NW_012002843v1 1148005 11 + 25348628 ggaggga-----------aaca i cerAty1.NW_012002843v1 C 0 I 1 s chlSab2.chr27 5157287 11 + 48547382 ggaggaa-----------ggaa i chlSab2.chr27 C 0 I 36 s manLeu1.NW_012102858v1 61446 11 + 130402 ggaggga-----------ggga i manLeu1.NW_012102858v1 C 0 C 0 s calJac3.chr3 145665158 11 + 190850796 ggaggga-----------agga i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571078 11 + 15139346 ggaggga-----------ggga i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9756568 11 + 11631747 ggaggga-----------agaa i aotNan1.NW_018493494v1 I 6 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=37.000000 s hg38.chr9_KI270719v1_random 141437 1 + 176845 a s panTro5.chr4 86970565 1 + 194502333 a i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33167 1 + 36344 a i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540860 1 + 85365473 g i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386783 1 - 190429646 g i rheMac8.chr5 I 1 C 0 s macFas5.chr5 144412229 1 - 189454096 g i macFas5.chr5 I 1 C 0 s cerAty1.NW_012002843v1 1148017 1 + 25348628 g i cerAty1.NW_012002843v1 I 1 C 0 s manLeu1.NW_012102858v1 61457 1 + 130402 a i manLeu1.NW_012102858v1 C 0 I 1 s calJac3.chr3 145665169 1 + 190850796 a i calJac3.chr3 C 0 I 1 s saiBol1.JH378162 14571089 1 + 15139346 c i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9756579 1 + 11631747 a i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e papAnu3.chr5 138758771 9100 - 178775436 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e chlSab2.chr27 5157298 36 + 48547382 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=2497.000000 s hg38.chr9_KI270719v1_random 141438 4 + 176845 cagg s panTro5.chr4 86970566 4 + 194502333 gaag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33168 4 + 36344 cagg i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540861 4 + 85365473 taag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386784 4 - 190429646 gagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412230 4 - 189454096 gagg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1148018 4 + 25348628 aagg i cerAty1.NW_012002843v1 C 0 C 0 s papAnu3.chr5 138767871 3 - 178775436 tag- i papAnu3.chr5 I 9100 N 0 s manLeu1.NW_012102858v1 61459 4 + 130402 gagg i manLeu1.NW_012102858v1 I 1 I 8 s calJac3.chr3 145665171 4 + 190850796 ggag i calJac3.chr3 I 1 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e aotNan1.NW_018493494v1 9756580 0 + 11631747 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e saiBol1.JH378162 14571090 0 + 15139346 C e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e chlSab2.chr27 5157298 36 + 48547382 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=70809.000000 s hg38.chr9_KI270719v1_random 141442 29 + 176845 gaaagaagg-aggg--------aaggaaggaagga-------aga s panTro5.chr4 86970570 37 + 194502333 gaaagaagggaggg--------agggaaggagggagtgaagcagt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33172 29 + 36344 gaaagaagg-aggg--------aaggaaggaagga-------aga i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540865 29 + 85365473 gaaagaagg-aagg--------aaggaaggaagga-------agg i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386788 29 - 190429646 gagggaagg-aggg--------agggagggaagaa-------agc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412234 29 - 189454096 gagggaggg-aggg--------agggagggaagaa-------agc i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1148022 29 + 25348628 gaggaagga-aggg--------agggagggaagaa-------agc i cerAty1.NW_012002843v1 C 0 C 0 s manLeu1.NW_012102858v1 61471 37 + 130402 gagggaggg-agggaaacaggaagggaggaaggaa-------gga i manLeu1.NW_012102858v1 I 8 C 0 s calJac3.chr3 145665175 29 + 190850796 gaaggaagg-aagg--------aaggaccaaagga-------agg i calJac3.chr3 C 0 C 0 s aotNan1.NW_018493494v1 9756580 29 + 11631747 ggaggaagg-aagg--------aaggaaggaagga-------agg i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e panPan2.chr4 87746806 77 + 195804263 I e ponAbe2.chr4 151823078 3577 - 198332218 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e saiBol1.JH378162 14571090 0 + 15139346 C e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e chlSab2.chr27 5157298 36 + 48547382 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=1517.000000 s hg38.chr9_KI270719v1_random 141471 2 + 176845 ta s panTro5.chr4 86970607 2 + 194502333 tg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33201 2 + 36344 ta i gorGor5.CYUI01002260v1 C 0 C 0 s ponAbe2.chr4 151826655 1 - 198332218 -a i ponAbe2.chr4 I 3577 N 0 s rheMac8.chr5 145386817 1 - 190429646 -a i rheMac8.chr5 C 0 I 2 s macFas5.chr5 144412263 1 - 189454096 -a i macFas5.chr5 C 0 I 2 s cerAty1.NW_012002843v1 1148051 1 + 25348628 -a i cerAty1.NW_012002843v1 C 0 I 2 s manLeu1.NW_012102858v1 61508 1 + 130402 -a i manLeu1.NW_012102858v1 C 0 I 30 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e panPan2.chr4 87746806 77 + 195804263 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e aotNan1.NW_018493494v1 9756609 0 + 11631747 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e saiBol1.JH378162 14571090 0 + 15139346 C e calJac3.chr3 145665204 0 + 190850796 C e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e chlSab2.chr27 5157298 36 + 48547382 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I e nomLeu3.chr20 42540894 0 + 85365473 C a score=-7705.000000 s hg38.chr9_KI270719v1_random 141473 4 + 176845 caat s panTro5.chr4 86970609 4 + 194502333 gaag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33203 4 + 36344 caat i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540894 3 + 85365473 -aag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386820 3 - 190429646 tag- i rheMac8.chr5 I 2 C 0 s macFas5.chr5 144412266 3 - 189454096 tag- i macFas5.chr5 I 2 C 0 s cerAty1.NW_012002843v1 1148054 3 + 25348628 tag- i cerAty1.NW_012002843v1 I 2 C 0 s calJac3.chr3 145665204 3 + 190850796 aac- i calJac3.chr3 C 0 C 0 s aotNan1.NW_018493494v1 9756609 3 + 11631747 aag- i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e panPan2.chr4 87746806 77 + 195804263 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e saiBol1.JH378162 14571090 0 + 15139346 C e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e manLeu1.NW_012102858v1 61509 30 + 130402 I e chlSab2.chr27 5157298 36 + 48547382 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=4808.000000 s hg38.chr9_KI270719v1_random 141477 2 + 176845 aa s panTro5.chr4 86970613 2 + 194502333 ga i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33207 2 + 36344 aa i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540897 2 + 85365473 ta i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386823 2 - 190429646 ga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412269 2 - 189454096 ga i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1148057 2 + 25348628 ga i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157334 2 + 48547382 ga i chlSab2.chr27 I 36 C 0 s calJac3.chr3 145665207 2 + 190850796 ga i calJac3.chr3 C 0 C 0 s aotNan1.NW_018493494v1 9756612 2 + 11631747 ga i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e panPan2.chr4 87746806 77 + 195804263 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e saiBol1.JH378162 14571090 0 + 15139346 C e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e manLeu1.NW_012102858v1 61509 30 + 130402 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=10505.000000 s hg38.chr9_KI270719v1_random 141479 2 + 176845 ag s panTro5.chr4 86970615 2 + 194502333 ag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33209 2 + 36344 ag i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540899 2 + 85365473 ag i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386825 2 - 190429646 ag i rheMac8.chr5 C 0 I 7 s macFas5.chr5 144412271 2 - 189454096 ag i macFas5.chr5 C 0 I 7 s cerAty1.NW_012002843v1 1148059 2 + 25348628 ag i cerAty1.NW_012002843v1 C 0 I 3 s chlSab2.chr27 5157336 2 + 48547382 ag i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61539 2 + 130402 ag i manLeu1.NW_012102858v1 I 30 C 0 s calJac3.chr3 145665209 2 + 190850796 ag i calJac3.chr3 C 0 C 0 s aotNan1.NW_018493494v1 9756614 2 + 11631747 ag i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e panPan2.chr4 87746806 77 + 195804263 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e saiBol1.JH378162 14571090 0 + 15139346 C e colAng1.NW_012120821v1 4198729 1031 + 12320365 I e macNem1.NW_012011022v1 3525351 42 + 39453387 I a score=118810.000000 s hg38.chr9_KI270719v1_random 141481 23 + 176845 gaaggaaggaaggaagaaagaaa s panTro5.chr4 86970617 23 + 194502333 gaaggaaagaaggaaggaaggaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33211 23 + 36344 gaaggaaggaaggaaggaaggaa i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540901 23 + 85365473 gaaggaaggaaggaaggaaggaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386834 23 - 190429646 gcaggaaggaaggaaggaaagaa i rheMac8.chr5 I 7 C 0 s macFas5.chr5 144412280 23 - 189454096 gcaggaaggaaggaaggaaagaa i macFas5.chr5 I 7 C 0 s macNem1.NW_012011022v1 3525393 23 + 39453387 gaaggaagggagggagggaggga i macNem1.NW_012011022v1 I 42 C 0 s cerAty1.NW_012002843v1 1148064 23 + 25348628 gaaggcaggaaggaaggaaagaa i cerAty1.NW_012002843v1 I 3 C 0 s chlSab2.chr27 5157338 23 + 48547382 gcaggaaggaaggaaggaaagaa i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61541 23 + 130402 gaaggcaggaaggaaggaaagaa i manLeu1.NW_012102858v1 C 0 C 0 s calJac3.chr3 145665211 23 + 190850796 caaggaatgaaggagggagggaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571090 11 + 15139346 ------------gaaggagggaa i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9756616 23 + 11631747 gaaggaaggaaggaaggaaggaa i aotNan1.NW_018493494v1 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e panPan2.chr4 87746806 77 + 195804263 I e dasNov3.JH575793 116223 276 + 255898 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I a score=3148.000000 s hg38.chr9_KI270719v1_random 141504 3 + 176845 gAT- s panTro5.chr4 86970640 3 + 194502333 gga- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33234 3 + 36344 gga- i gorGor5.CYUI01002260v1 C 0 I 15 s nomLeu3.chr20 42540924 3 + 85365473 gga- i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386857 3 - 190429646 gga- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412303 3 - 189454096 gga- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3525416 3 + 39453387 gAT- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1148087 3 + 25348628 gga- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157361 3 + 48547382 gga- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61564 3 + 130402 gga- i manLeu1.NW_012102858v1 C 0 C 0 s calJac3.chr3 145665234 3 + 190850796 gAT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571101 3 + 15139346 gAT- i saiBol1.JH378162 C 0 I 3 s aotNan1.NW_018493494v1 9756639 3 + 11631747 gAT- i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 116499 3 + 255898 -AAT i dasNov3.JH575793 I 276 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e panPan2.chr4 87746806 77 + 195804263 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I a score=54743.000000 s hg38.chr9_KI270719v1_random 141507 11 + 176845 AC----AATAGCCAG s panTro5.chr4 86970643 15 + 194502333 aCTAACAATAGCAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87746883 11 + 195804263 ----ACAATAGCAGG i panPan2.chr4 I 77 C 0 s gorGor5.CYUI01002260v1 33252 11 + 36344 ----ACAATAGCCAG i gorGor5.CYUI01002260v1 I 15 C 0 s nomLeu3.chr20 42540927 11 + 85365473 ----aCAATAGCAGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386860 11 - 190429646 ----agAATAGCAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412306 11 - 189454096 ----agAATAGCAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3525419 11 + 39453387 ----ACAATAGCCTG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1148090 11 + 25348628 ----agAATAGCAGA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157364 11 + 48547382 ----agAATATCAGA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61567 11 + 130402 ----agAATAGCAGA i manLeu1.NW_012102858v1 C 0 C 0 s calJac3.chr3 145665237 11 + 190850796 ----ACAATAGGAGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571107 11 + 15139346 ----ACAATAGGAGG i saiBol1.JH378162 I 3 C 0 s aotNan1.NW_018493494v1 9756642 11 + 11631747 ----ACAATAGGAGG i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 116502 11 + 255898 ----AGAACAGCAGG i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21704973 0 - 63241923 C e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I a score=10920.000000 s hg38.chr9_KI270719v1_random 141518 1 + 176845 T s panTro5.chr4 86970658 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 87746894 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33263 1 + 36344 T i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540938 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386871 1 - 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412317 1 - 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3525430 1 + 39453387 T i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1148101 1 + 25348628 T i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157375 1 + 48547382 T i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61578 1 + 130402 T i manLeu1.NW_012102858v1 C 0 C 0 s calJac3.chr3 145665248 1 + 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571118 1 + 15139346 T i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9756653 1 + 11631747 T i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21704973 1 - 63241923 T i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 116513 1 + 255898 T i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e cebCap1.NW_016107603v1 397193 354 + 3802414 I e colAng1.NW_012120821v1 4198729 1031 + 12320365 I a score=226929.000000 s hg38.chr9_KI270719v1_random 141519 23 + 176845 ATATTTACTCAAAG-AGAAGAC-AT s panTro5.chr4 86970659 23 + 194502333 GTATTTACTCAAAA-AGAAGAC-AT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87746895 23 + 195804263 GTATTTACTCAAAA-AGAAGAC-AT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33264 23 + 36344 ATATTTACTCAAAG-AGAAGAC-AT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540939 23 + 85365473 GTATTTACTCAAAA-AGAAGAC-AT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386872 23 - 190429646 ATATTTACTCAAAG-AGAAGAC-AT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412318 23 - 189454096 ATATTTACTCAAAG-AGAAGAC-AT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3525431 23 + 39453387 ATATTTACTCAAAG-TGAAGAC-AT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1148102 23 + 25348628 ATATTTACTCAAAG-AGAAGAC-AT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157376 23 + 48547382 ATATTTACTCAAAG-AGAAGAC-AT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61579 23 + 130402 ATATTTACTCAAAG-AGAAGAC-AT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4199760 23 + 12320365 ATATTTACTCAAAG-AGAAGAC-AT i colAng1.NW_012120821v1 I 1031 C 0 s calJac3.chr3 145665249 23 + 190850796 ATATTTACTCAAAT-AGAAGAC-AT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571119 23 + 15139346 ATATTTACTCAAAG-AGAAGAC-AT i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9756654 24 + 11631747 ATATTTACCCAAAG-AGAAGACTAT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21704974 23 - 63241923 GTATTTCCTCAAAG-GAGAGGC-AT i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 116514 24 + 255898 GCAAGCACGCAGAGTAGAAGAC-AG i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e cebCap1.NW_016107603v1 397193 354 + 3802414 I a score=2526823.000000 s hg38.chr9_KI270719v1_random 141542 251 + 176845 CATAAAACCCTTTTAACAAACACAGCCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGACTGTAGAGTCCTATTCAGGGTCAAG-----GGAAGGAGAAATCAAACTAAAGATCATAACGCTGCATGTAT--GTGGCATTGTATTGCCAGAGTTCTCTGAGTAAACCTTTCTAGAGATGCACATTTTGCACTCTATTGGAAAAGTTATCTTAATTATAATGTTTCTGAAGATGCATTTGCCATACTGAAAGCA s panTro5.chr4 86970682 252 + 194502333 CATAAAACCCTTTTAACAAACACAGCCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGAATATAGAGTCCTATTCAGGGTTAAG-----GGAAGGAGAAATCAAACTAAAGATCATAACGCTACATGTAT-TGTGGCATTGCATTGCCAGAATTCTCTGAGTAAACCTTTCTAGAGATGGAAATTTTGCACTCTATTGGAAAAGTTATCTTAGTTATAATGTTTCTGAAGAAGCATTTGCCATAATGAGAGTA i panTro5.chr4 C 0 I 16 s panPan2.chr4 87746918 252 + 195804263 CATAAAACCCTTTTAACAAACACAGCCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGAATATAGAGTCCTATTCAGGGTTAAG-----GGAAGGAGAAATCAAACTAAAGATCATAACGCTACATGTAT-TGTGGCATTGCATTGCCAGAATTCTCTGAGTAAACCTTTCTAGAGATGGACATTTTGCACTCTATTGGAAAAGTTATCTTAGTTATAATGTTTCTGAAGAAGCATTTGCCATAATGAGAGTA i panPan2.chr4 C 0 I 16 s gorGor5.CYUI01002260v1 33287 251 + 36344 CATAAAACCCTTTTAACAAACACAGCCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGACTGTAGAGTCCTATTCAGGGTCAAG-----GGAAGGAGAAATCAAACTAAAGATCATAACGCTGCATGTAT--GTGGCATTGTATTGCCAGAGTTCTCTGAGTAAACCTTTCTAGAGATGCACATTTTGCACTCTATTGGAAAAGTTATCTTAGTTATAATGTTTCTGAAGATGCATTTGCCATATTGAAAGCA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42540962 252 + 85365473 CATAAAACCCTTTTAACAAACACAGCCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGAATACAGAGTCCTATTCAGGGTTAAG-----GGAAGGAGAAATCAAACTAAAGATCATAACGCTACATGTAT-TGTGGCATTGCATTGCCAGAATTCTCTGAGTAAACCTTTCTAGAGATGGACATTTTGCACTCTATTGGAAAAGTCATCTTAGTTATAATGTTTCTGAAGAAGCATTTGCCATAATGAGAGTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145386895 252 - 190429646 CATAAAACCCTTTTAACAAACACAGCCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGAATATAGAGTCCTATTCAGGGTTAAC-----AGAAGGAGATCTCAAACTAAAGATCATAATGCTACATGTAT-TGTGGCATTGCATTGCCAGAGTTCACTGAGTAAACCTTTCTAGAGATGGACATTTTTCACTCTGTTGGAAAAGTTATCTTTGTTATAAGGTTTCTGAAGAAGCATTTGCCATAATGAAGGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412341 252 - 189454096 CATAAAACCCTTTTAACAAACACAGCCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGAATATAGAGTCCTATTCAGGGTTAAC-----AGAAGGAGATCTCAAACTAAAGATCATAATGCTACATGTAT-TGTGGCATTGCATTGCCAGAGTTCACTGAGTAAACCTTTCTAGAGATGGACATTTTTCACTCTGTTGGAAAAGTTATCTTAGTTATAAGGTTTCTGAAGAAGCATTTGCCATAATGAAGGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3525454 245 + 39453387 CATAAAA-CCTTTTAACAAACACAGCCTGAGTTTTCAA--TTCCTCTCCATTCAACTTCCTTGACTAT-GAGTCCTAATCA-GGTTAAG-----GGAAGGAGA-ATCAAACTAAAGATCATAATGCTGCATGTATATGTGGCATTGCATTGCTGGAGTTCTCTGAGT-AACTTTCCTAGAGATGGACATTTTGCACTCTATTGGAAAAGTTATCTTAGTTATAATGTTTCTGAAGATGCATTTGCCATAATGAA-GTA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1148125 252 + 25348628 CATAAAACCCTTTTAACAAACACAACCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGAATATAGAGTCCTATTCAGGGTTAAC-----AGAAGGAGATCTCAAACTAAAGATCATAATGCTACATGTAT-TGTGGCATTGCATGGCCAGAGTTCACTGAGTAAACCTTTCTAGAGATGGACATTTTGCACTCTATTGGAAAAGTTATCTTAGTTATAAGGTTTCTGAAGAAGCATTTGCCATAATGAAGGTA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157399 251 + 48547382 CATAAAACCCTTTTAACAAACACAGCCTGACTTCTCAAATT-CCTCTCCATTCAACTTCCTTGAATATAGAGTCCTATTCAGGGTTCAC-----AGAAGGAGATCTCAAACTAAAGATCATAACGCTACATGTAT-TGTGGCATTGCGTTGCCAGAGTTCACTAAGTAAACCTTTCTAGAGATGGACATTTTTCACTCTGTTGGAAACATTATCTTAGTTATAAGGTTTCTGAAGAAGCATTTGCCATAATGAAGGTA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61602 252 + 130402 CATAAAACCCTTTTAACAAACACAACCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGAATATAGAGTCCTATTCAGGGTTAAC-----AGAAGGAGATCTCAAACTAAAGATCATAATGCTACATGTAT-TGTGGCATTGCATTGCCAGAGTTCACTGAGTAAACCTTTCTAGAAATGGACATTTTTCACTCTCTTGGAAAAGTTATCTTAGTTATAAGGTTTCTGAAGAAGCATTTGCCATAATGAAGGTA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4199783 252 + 12320365 CATAAAACCCTTTTAGCAAACACAGCCTGACTTCTCAAATTCCCTCTCCATTCAACTTCCTTGAATATAGAGTCCTATTCAGTGTTAAC-----AGAAGGAGATCTCAAACTAAAGATAATAATGCTACATGTAG-TGTGGCATTGCATTGCCAGAGTTCACTGAGTAAACCTTTCTAGAGATGGACATTTTGCACTCTGTTGGAAAAGTTATCTTAGTTATAAGGTTTCTGAAGAAGCATTTGCCATAATGAAGGTA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145665272 250 + 190850796 CCTACAACCCTTTTAACAA--ACAGCCTGTCTTCGCAAATTCCCTCTCCATTAAACTTCCTTGACTCTAGAGTCCTCTTCAGGGTTAAT-----AGAAGGAGAGATCAAACTAAAGATCAGAATGTGGCATGTGT-TGTGGCATTGCACTACCTAAGTTCTATGAGTAAACTTTCCTAGAGATGGACATTTTGCACTCTATTGGAAAAAATATTTTAGTTATAATGATTCTAAAGATGAATTTGTCATTATGAAAGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571142 250 + 15139346 CATACAACCCTTTTAACAA--ACAGCCTGACTTCCCACATTCCCTCTCCATTCAACTTCCTTGACTCCAGAGTCTTCTTCAGGGTTAAT-----AGAAGGAGAGATCAAACTAAAGATCAGAATGTGGAAAGTGC-TGTGGCATTGCACTGCCAAAGTTCTCCGAGTGCACTTTTCTCGAGCTGGACATTTTGTACTCTATTGGAAAAAATATCTTAGTTATAATGATACTGAAGATGCATTTGCCATAATGAAAGTA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 397547 250 + 3802414 cATACAACCCTTTTAACAA--ACAGCCTGACTTCCCAAATTCCTTCTCCATTCAACTTCCTTGACTCTAGAATCCTCTTCAGGGTTAAT-----AGAAGGAGAGATCAAACTAAAGATCAGAATGTGGCATGTGT-TGTGACATTGCACTGCCAAAGTTCTCTGAGTAAACTTTTCTAGAGCTGGACATTTTGCACTCTATTGGAAAAAATGTCTTAGTTATAATGATTCTGAAGATGCATTTGCCATAATGAAAGTA i cebCap1.NW_016107603v1 I 354 C 0 s aotNan1.NW_018493494v1 9756678 246 + 11631747 CATACAACCCTTTTAACAA--ACAGCCTGATTTC-CAGATTCC-TCTCCATTCAACTTCCTTGACTCTAGAGTCCTC-TCAGGGTTAAC-----AGAAGGAGAGATCAAACTGAAGATCAGAATGTGGCATGTGT-TGTGGCATTGCACTGCCAAAGTTCTCTGAGTAAACTTTTCTAGAGCTGGATATTTTGCACTCTATTGGAAAAAATATCTTAGTTACAATGATTCTGAAGATTCATTTGCCATAATGAAAGT- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21704997 242 - 63241923 CATACAAACTTTTGGACAAACACAGGTTGACTT-TAACATCCCCTCTCCATTCAAAT-------CTTTGTAGTTTTA--CATTGATGAG-----AAAAAGAAAAATCGAGCTAAGGAATACAATGCTACATATCC-TCTATTATCAAATTCTCAGAATTCCCTGATTAGACTATCCTAGAGGTAGAAATTTTTCATACTTTTGGAAAGCTTGTTTTAGTCGCAATGTTTCTGGAAATGCAATCACCATAATGAGTGCA i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 116538 249 + 255898 CATATATGCCTTTTCACAAATA-----TGACTTTTCACAATCCCTCTTCATTCAGCTTCCTGAGCTACAGAGTCTTATTTAAAGCTGACTAGGGCAAGGGAGAAGTCAAGTTT-GGAACATAATTCTAAACATAT-CCTGTCATTACATTCCTAGAGTTCCCTAAGTAAACTTTTCTAGAGATGGAAATTTTGCACACTTTT-AAAATTTTAATTTAGTT-CAGTGTTTCTGGGAATACAATCATGATTATTAGAGAA i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=14272.000000 s hg38.chr9_KI270719v1_random 141793 4 + 176845 AGCA s gorGor5.CYUI01002260v1 33538 4 + 36344 AGCA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42541214 4 + 85365473 CGCG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145387147 4 - 190429646 CGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412593 4 - 189454096 CGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3525699 4 + 39453387 AGCG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1148377 4 + 25348628 CGTG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157650 4 + 48547382 CATG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61854 4 + 130402 CGTG i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4200035 4 + 12320365 CGTG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145665522 4 + 190850796 AGTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571392 4 + 15139346 AGTG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 397797 4 + 3802414 AGTG i cebCap1.NW_016107603v1 C 0 C 0 s canFam3.chr13 21705239 4 - 63241923 AATA i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 116787 4 + 255898 AGTA i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e panPan2.chr4 87747170 16 + 195804263 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e aotNan1.NW_018493494v1 9756924 0 + 11631747 C e panTro5.chr4 86970934 16 + 194502333 I a score=2679788.000000 s hg38.chr9_KI270719v1_random 141797 275 + 176845 GTCACATACAATTTGGTAGACACCAGCACAAA-TGACAAGAAAAACTTGGTAAAGTTGAAGAGACTGCCTTTGTTATATCTAATATTCTATCACCCCAGATCTATCTTCTCAAATCTCCACATTACTTAGCCTAACCCTGTTTT-TCTGTTTTCTAGAGGAACCCACCACATTGATCAGGTTGATTTATTCACA-TTTTCCCA--AA-AATGCTAGGTAGATTC-CTTCCTAAATCCATTAGTAAG-TTATAGTCTGTATTCC-C-CATG-GATGAACTGTGTTCA s panTro5.chr4 86970950 273 + 194502333 GTCACATACAATTCGATAGACATTAGCACAAG-TGACAGGAAAAACTTGATAAAGGTAAAGGGATTGCCTTTGTTGTATCTAATATTCTATCACCCCAGATCTATCTTTTTAAATCACCACATTACTTAGCGTAACCCTGTTTT-TCTATTTTCTAGAATAACCCTCCACATTGATCAGGCTTATTTATTCACA-TTTTTCCA--AA---TGCTAGGTACATTC-CTTCCTAAATCAACCAGTCAG-TTATAGTCTATAATGC-C-CATG-GATGAATTATGTTCA i panTro5.chr4 I 16 C 0 s panPan2.chr4 87747186 273 + 195804263 GTCACATACAATTCGATAGACATTAGCACAAG-TGACAGGAAAAACTTGATAAAGGTAAAGGGATTGCCTTTGTTATATCTAATATTCTATCACCCCAGATCTATCTTTTTAAATCACCACATTACTTAGCGTAACCCTGTTTT-TCTATTTTCTAGAATAACCCTCCACATTGATCAGGCTTATTTATTCACA-TTTTTCCA--AA---TGCTAGGTACATTC-CTTCCTAAATCAACCAGTCAG-TTATAGTCTATAATGC-C-CATG-GATGAATTATGTTCA i panPan2.chr4 I 16 C 0 s gorGor5.CYUI01002260v1 33542 275 + 36344 GTCACATACAATTTGATAGACACCAGCACAAA-TGACAAGAAAAACTTGGTAAAGTTGAAGAGACTGCCTTTGTTATATCTAATATTCTATCACCCCAGATCTATCTTCTCAAATctccacattatttagcctaaccctatttt-tctattttctagaggaacccaccacattgatcaggttgatttattcaca-ttttccca--aa-aatgctaggtagattc-cttcctAAATCCATTAGTAAG-TTATAGTCTGTATTCC-C-CATG-GATGAACTGTGTTCA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42541218 276 + 85365473 GTCACGTACAATTCGATAGACATTAGCACAAG-TGACAGGAAAAACTTAATAAAGGTGAAGGGATTGCCTTTGTTATATCTAATATTCTATCACCCCAGATCTATCTTTTTAAATCACCGCATTACTTAGCGTAACCCTGTTTT-TCTATTTTCTAGAAGAACCCTCCACATTGATCAGGTTGATTTATTCACATTTTTCCCA--AA-AATGCTAAGTACATTC-CTTCCTAAATCAACCAGTCAG-TTATAGTCTATATTGC-C-CATG-GATGAATTATGTTCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145387151 272 - 190429646 GTCACATACAATTTGATAGACATCAGCACAAG-TGAAAGGAAAAACTTGATAAAGGTGAAGGGATTGCCTTTGTTATATCTAATATTCTATCACCCCAGATCTATCTTTTTAAATCACCACATTACTTAGCCTAACCCTGTTTT-TCTGTTTTCTAGAGGAACTCTCCACATTGATCAGGTTGATTTATTCACA-TTTTCCCA--AAAAATGCTAGGTACGTTC-CTTCCTAAATCAACCCGT-----TATAGTCTGAATTGC-C-CACG-GATGAACTATGTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412597 272 - 189454096 GTCACATACAATTTGATAGACATCAGCACAAG-TGAAAGGAAAAACTTGATAAAGGTGAAAGGATTGCCTTTGTTATATCTAATATTCTATCACCCCAGATCTATCTTTTTAAATCACCACATTACTTAGCCTAACCCTGTTTT-TCTGTTTTCTAGAGGAACTCTCCACATTGATCAGGTTGATTTATTCACA-TTTTCCCA--AAAAATGCTAGGTACGTTC-CTTCCTAAATCAACCCGT-----TATAGTCTGAATTGC-C-CACG-GATGAACTATGTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3525703 273 + 39453387 GTCACATACAATTTGATAGACACCAGCACAAACTGACAGGAAAA--CTGGTGAAGTTG-AAGAACTGCCTTTGTTGTATCTAATATTCTGTCACCCCAGATCTATCTTCTTAAATCTCCACATTACTTAGCCTAACCCATTTTT-TCTATTTTCTAGAAGAAC-CACCACATTGATCAGGTGGATTTATTCACA-TTTTTTCC--AAAAATGCTA-GTACATTCTCTTCCTACATCCATCAGTGGA-GTTAAGTCTGTGTTCC-C-CATG-GATGACTACTGTTCA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1148381 272 + 25348628 GTCACATACAATTTGATAGACATCAGCACAAG-TGAAAGGAAAAACTTGATAAAGGTGAAGGGATTGCCTTTGTTGTATCTAATATTCTATCACCCCATATCTATCTTTTTAAATCACCACATTACTTAGCCTAACCCTGTTTT-TCTGTTTTCTAGAGGAACTCTCCACATTGATCAGGTTGATTTATTCACA-TTTTCCCA--AAAAATGCTAGGTACATTC-CTTCCTAAATCAACCCGT-----TATAGTCTGAATTGC-C-CACA-GATTAACTATGTTCA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157654 271 + 48547382 GTCACATACAATTTGATAGGCATCAGCACAAG-TGAAAGGAAAAACTTGATAAAGGTGAAGGGATTGCCTTTGTTATATCTAATATTCTATCACCCCAGATCTATCTTTTTAAATCACCACATTACTTAGCCTAACCCTGTTTT-TCTGTTTTCTAGAGGAACCCTCCACATTGATCAGGTTGATTTATTCACA-TTTTCCCC--AAAAATGCTAGGTACATTC-CTTCCT-AATCAACCCGT-----TATAGTCTGAATTGC-C-CACG-GATGAACTATGTTCA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 61858 272 + 130402 GTCACATACAATTTGATAGACATCAGCACAAG-TGAAAGGAAAAACTCGATAAAGGTGAAGGGATTGCCTTTGTTATATCTAATATTCTATCACCCCATATCTATCTTTTTAAATCACCACATTACTTAGCCTAACCCTGTTTT-TCTGTTTTCTAGAGGAACTCTCCACATTGATCAGGTTGATTTATTCACA-TTTTCCCA--AAAAATGCTAGGTACATTC-CTTCCTAAATCAACCCGT-----TATAGTCTGAATTGC-C-CACG-GATGAACTATGTTCA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4200039 272 + 12320365 GTCACATACAATTTGATAGACATCAGCACAAG-TGAAAGGAAAAACTTGATAAAGGTGAAGGGATTGCCTTTGTTATATCTAATATTCTATCACCCCAGAGCTATCTTTTTAAATCACCACATTACTTAGCTTAACCCTGTTTT-TCTATTTTCTAGAAGAACCTTCCACATTGATCAGGTTGATGTATTCACA-TTTTCTCC--AAAAATGCTAGGTACATTA-CTTCCTAAATCAACCCAT-----TATAGTCTGAATTGC-C-CATG-GACGAACTACGTTCA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145665526 276 + 190850796 GTCACATATAATTTTATAGACATCAGCACAAA-TGACAGGAATACCTTGGTAAATGTGAAGGGACTGGCTGAATTATATCTGATAGTCTATCACGCCAGATCTGTCTTCTTAAATCATCACATTACTTAGCCTAACCCTATTAA-TCTATTTTCTATATGAACCTTCCACACCGATCAGGTTGATTTATGCACA-GTTTTTCC--AAAATTGCTGGGTACATTC-CTTCCTAAATCAGCTAGTCAG-TTATAGTCTGTATTCC-C-CATG-GATAAACTATGTTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571396 276 + 15139346 GTCACATACAATTTGATAGACATCAGCACAAA-TGACAGAAAAAACTTGGGAAATGTGAAGGGACTACCTGTATTATATCTGATATTCTATCACCCCAGGTCTATCTTCTGAAATCATCACATTACTTAGCCTAACCCTATTAA-TCTATTTTCTAGATGAACCTTCCACACCGATCAGGTTGATTTATGCACA-TTTTTCCC--AAAATTGCTAGGTACATTC-CTTCCTAAATCAACTAGTCAG-TTATAGTCTGTATTCC-C-CATA-GATGAACTATGTTCA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 397801 276 + 3802414 GTCACATACAATTTGATAGACATCAACACAAA-TGACAGGAAAAACTTGGTAAATGTGAAGGGACTGCCTGTATTATATTTGATATTCTATCACCCCAGATCTATCTTCTGAAATCATcacattacttagcctaaccctattaa-tctattttctagatgaaccttccacaccgatcaggttgatttatgcaca-ttttcccc--aaaattgctaggtacattc-cttcctAAATCAACTAGTCAG-TTATAGTCTGTATTCC-C-CATG-GATGAGCTATGTTCA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9756924 267 + 11631747 ---------AATTTGATAGACATCAGCACGAA-TGACAGGAAAAACTTGGTAAATGTGAAGGGACTGCTTGTATTATATCTGATATTCTATCACCCCAGATCTAGCTTCTT-AATCGTCACATTACTTAGCCTAACCCTA-TAA-TCTATTTTCTAGATGAATCTTCCACACCGATCGGGTTGATTTATGCACA-CTTTTCCC--AAAATTGCTAGGTACATT--CTTTCTAAATCAACTAGTCAGTTTATAGTCTGTATTCC-CGCATGTGATGAACGATGGTCA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21705243 273 - 63241923 --CATGTAATACTTGATAGATACCAGCCCAGA-AAATAAGAAGAACTTAGTAAAAACAAGAGGGCTGATTCTGTTATATCTGCCATCTAGTCACTCAGGATTTACCTTCTTTAA----CACATTACTTATCATAATCCAATTTTATCTATTTCCTAAAAGAATTGTCCACATTAATCATATGGATTTATTCACA-TTTTTCCCCTCAAAATGCTGGATGCATTT-TTTCCTGAATCACCTAGTCTA-TTACTGTCAATATTCC-A-CATG-GATGAACTACATTCA i canFam3.chr13 C 0 I 7 s dasNov3.JH575793 116791 277 + 255898 GTCATGTATCACTTGATAGATATCAACACGAA-TGCCAAAAAGAATTTGGCAAAGGCAAAGAGAATGCTTCTATTTTATACACCATGCCATCACCCTAGATCCATCGTCCTAAACAAGCACATTACGTAGCCTAACCTTCTTTCCCCTATTTTCTTGAAGAACCCCTCATATTAGTCGAATTGGTTTATTCACA-TTTTTCCC--AA-AATGCCAGGCACATTC-CTTCCTTAATTACCTATTCTA-TTGCTACCTGAATTTCTC-CACT-AATAAACCATATTCA i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=2546653.000000 s hg38.chr9_KI270719v1_random 142072 287 + 176845 CCAGTT-ATGACTCTTAGGAGGAACTTCATAGAAGATCTTCAGTGGCATCTATTGGTACATGTTGGACATTAACTAAAAATGTATAGTTTTAGCAACCAACAGATTCTATTCTTATACCTGTTGGTCATGTCCAGGCAGTTATGTGTAAAATAATTACACAATG-TTTCAAAATTT--CAAGATGTTT-GCCTACCTATATAGT------GTCCTTCACTCTCCTCCCCAGCTCTCCAAATAATATCCATAATTCA-AAGACCAGTTAAATCCTACAGGCATATTCACAGAATAACTGC s panTro5.chr4 86971223 277 + 194502333 CCAGTT-CTGACTCTTAGGAGGA-----------GATCTTCAATAGCATCTGTTGGTATATGCTGGACATTACCTAAAAATGTACAGTTTTTGCAACCAACAGATTCTATTCTTATACCTGTTGGTCATGCCCAGGCAGTTACATGTAAAATAACTACACAAAAATTTCAAAATTT--CAAGATGTTT-Gcccacctatataat------gtccctcactctcctctccagctctctaaataatatccataattca-aagaccagttaaatcctacAGGCATATTCACAGAATAACTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 87747459 275 + 195804263 CCAGTT-CTGACTCTTAGGAGGA-----------GATCTTCAATAGCATCTGTTGGTATATGCTGGACATTACCTAAAAATGT--AGTTTTTGCAACCAACAGATTCTATTCTTATACCTGTTGGTCATGCCCAGGCAGTTACATGTAAAATAACTACACAAAAATTTCAAAATTT--CAAGATGTTT-Gcccacctatataat------gtccctcgctctcctctccagctctctaaataatatccataattca-aagaccagttaaatcctacAGGCATATTCACAGAATAACTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 33817 287 + 36344 CCAGTT-ATGACTCTTAGGAGGAACTTCATAGAAGATCTTCAGTGGCATCTATTGGTACATGTTGGACATTAACTAAAAATGTATAGTTTTAGCAACCAACAGAATCTACTCTTATACCTGTTGGTCATGTCCAGGCAGTTATGTGTAAAATAATTACACAATG-TTTCAAAATTT--CAAGATGTTT-GCCTACCTATATagt------gtccttcactctcctctccagctctccaaataatatccataattca-aagaccagttaaatcctacAGGCATATTCACAGAATAACTGC i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42541494 286 + 85365473 CCAGTTAATAACTCTTAGGAGAAACTTCATAGAAGATCTTCAATAGCATCTGTTGGTACATGTTTGACATTACCTAAAAATGTACAGTTTTCACAACCAACAGATTCTA---TTATACCTGTTGGTCATGCCCAGGCAGTTACATGTAAAATAATTACACAAAAAGTTCAAAATTT--CAAGATGTTT-GCCCACCTATATAAT------GTTCTTCACTCTCCTCTCCAGCTCTCTAAATAATATCCATAATTCA-AAGACCAGTTAAATCCTACAGGCATATTCACAGAATAACTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145387423 287 - 190429646 CCAGTT-ATGACTCTTAGGAGGAACTTCACAGAAGATCTTCAGTGGCATCTGTTGGTACATATTGGACATTACCTAAAAATTTAGAGTTTTAGCAACAAACAGATTCTATTCTTAAACCTGTTGGTCATGCCCGGGCAGTTATGTGTAAAATAACTACACAGAA-TTTCAAAAATT--CAAGATGTTT-Gcccacctatttaat------gtccttcactctcctctccagctttccaaataatatccataattca-aagaccagtgaaatcctacAGGCATATTCCTAGAATAACTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144412869 287 - 189454096 CCAGTT-ATGACTCTTAGGAGGAACTTCACAGAAGATCTTCAGTGGCATCTGTTGGTACATATTGGACATTACCTAAAAATTTAGAGTTTTAGCAACAAACAGATTCTATTCTTAAACCTGTTGGTCATGCCCGGGCAGTTATGTGTAAAATAACTACACAGAA-TTTCAAAAATT--CAAGATGTTT-GCCCACCTATTTAAT------GTCCTTCACTCTCCTCTCCAGCTTTCCAAATAATATCCATAATTCA-AAGACCAGTGAAATCCTACAGGCATATTCCTAGAATAACTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3525976 275 + 39453387 CCAGTTAATGACTCTTAGG-GGAACTTCACAAAAG-TCGTCAGTGGCATCTATTGGTAC-TGTTGGACATTACCTAAAAA--------TTTAGCAACCAACAGATGCTATT-TTATACCTGTTGGTCATGCCC-AGTAGTTACATGTAAAATAATTACACAGAG-TTTGAAAATTTCACAAGATGttt-cgccacctgtatagt------gcccttcactctcctctccagctctccaaatattatccataattc--aagaccagttcagtcctacaggcatattcc-agaataacttc i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1148653 287 + 25348628 CCAGTT-ATGACTCTTAGGAGGAACTTCACAGAAGATCTTCAGTGGCATCTGTTGGTACATATTGGACATTATCTAAAAATTTAGAGTTTTAGCAACAAACAGATTCTATTCTTAGACCTGTTGGTCATGCCCGGGCAGTTATGTGTAAAATAACTACACAGAA-TTTCAAGAATT--CAAGATGTTT-Gcccacctatttaat------gtccttcactctcctctccagctctccaaataatatctataattca-aagaccagtgaaatcctacAGGCATATTCCTAGAATAACTTC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5157925 286 + 48547382 CCAGTT-ATGACTCTTAGGAGGAACTTCACAGAAGATCTTCAGTGGCATCTGTTGGTATATATTGGACATTACCTAAAAATGTAGAGTTTTAGCAACAAACAGATTCTATTCTTAGACCTGTTGGTCATGCCCGGGCAGTTATGTGTAAAATAACTACACAGAA-TTCC-AAAATT--CAAGATGTTT-GCCCACCTATTTAAT------GTCCTTCACTCTCCTCTCCAGCTCTCCAAATAGTATCCATAATTCG-AAGACCAGTGAAATCCTACAGGCATATTCCTAGAATAACTTC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 62130 287 + 130402 CCAGTT-ATGACTCTTAGGAGGAACTTCACAGAAGATCTTCAGTGGCATCTGTTGGTACATATTGGACATTACCTAAAAATTTAGAGTTTTAGCAACAAACAGATTCTATTCTTAGACCTGTTGGTCATGCCCGGGCAGTTATGTGTAAAATAACTACACAGAA-TTTCAAAAATT--CAAGATGTTT-Gcccacctatttaat------gttcttcactctcctctccagctctccaaataatatccataattca-aagaccagtgaaatcctacAGGCATATTCCTAGAATAACTTC i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4200311 286 + 12320365 CCAGTT-ATGACTCTT-GGAGGAACTTCACAGAAGATCTTCAGTGGCATCTGTTGGTACACATTGGACATTACCTAAAAATGTAGAGTTTTAGCAACGAACAGATTCTATTCTTATACCTGTTGGTCATGCCCGGGCAGTTACGTGTAAAATAACTACACAAAA-TTTCAAAAATT--TAAGATGTTT-Gcccacctatttaat------gtccttcactctcctctccagctctccaaataatatccataattca-aagaccagtgaaatcctacAGGCATATTCCCAGAATAACTTC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145665802 284 + 190850796 CCACTT-ATGATTCTTAGGAGAAACTTCATAGAAGATCTTCAATGGCACCTATTGGTACATGTTGGACATTACCTAAAAATGTATAGTTTCAGCAACGAACAGATTCTATTTTTATAGCTGTTGTTCATGCCCAGGCAGTCACGTGT--AATAATTACACAACG-TTTCAAAATTT--CAAAATGTTT-GCCCACCTATATAAG------GTCCTGTACTCTCCTCTCCATCTC-CTAAATGATATCCATAATTCA-AAGACCAGTTAAATCCTACAGGCATATTCACAGAATAACTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571672 282 + 15139346 CCACTT-ATGATTCTTAGGAGGAACTTCAT---AGATCTTTAATGGCACCTGTTGGTACATGTTGGACATTACCTAAAAATGTATAGTTTCAGCAACCAACAGATTCTATTTTTATAGCTGTTGTTCATGCCCAGGTAGTTACCTGT-AAATAATTACACAACG-TTTCAAAATTT--AAAAATGTTT-GCCCACCTAAATAAG------GTCCTGTACTCTCCTCTCCAGCTC-CTAAATGATATCCATAATTCA-AAGACCAGTTAAATTCTACAGGCATATTCACAGAATAATTTC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 398077 285 + 3802414 CCACTT-ATGATTCTTTGGAGGAACTTCATAGAAGATCTTCAACAGCACCTGTTGGTACATGTTGGACATTACCTAAAAATGTATAGTTTCAGCAACCAACAGATTCTATTTTTATAGCTGTTGTTCATGCTCAGGCAGTTACATGT-AAATAATTACACAATG-TTTCAAAATTT--CAAAATGATT-GCCCACCCAAATAAG------GTCCTGTACTCTCCTATCCAGCTC-CTAAATGATATGCATAATTCA-AAGAACAGTTAAATACTACAGGCATATTCACAGAATAACTTC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9757191 283 + 11631747 CCACTT-ATGA-TCTTAGGAGGAACTTCATGGAAGATCTTCAATGGCACCTGTTGGTACATGTTGGACATTACCTAAAAATGTATAGTTTCAGCAACCAACAGATTCTATTTTTATAGCTGTTGTTCATGCCCAGGCAGTTACGTGT-AAATAATTACACAACG-TTTCAAAATTT--CAAAATGTtt-gccctcctatataag------gtcctgtactctcctctctagctc-ctaaatgatatccataattca-aagaccagttaaatcctaca-gcatattcacagaataattcc i aotNan1.NW_018493494v1 C 0 C 0 s dasNov3.JH575793 117068 247 + 255898 ---------------------------CAAATCACTTACTTCATGACACCTGTTGGTATGTACTGGACAC------------------TTCTGCAAGGAACGCATTCAGCT-TTATTCTCATCTCTCACACACAGGCAATTAC-TGTAAAATCACTACACAAAG-TTT-ATCAGTT--CAGGGTATTTCACCCACTTATATTATACCTAGGCCCCTTCCCTTCTTCTCCACCTC-TTTAATGATATCCATCATTCATAAAACCAAATAAGTCCTACCATGTTACTCACAGAGAAATTTC i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e canFam3.chr13 21705516 7 - 63241923 I a score=1180609.000000 s hg38.chr9_KI270719v1_random 142359 122 + 176845 CCT-GAAAACATTGCTTAAATTAATGAAGACCATC-TATGG-ACAATGCATCTTCAAGAGCTCAAGATCTGGTG-------------------------AAAAAACGGAAACAAAGAAGAAATTTCAATACAATGTGATGAAAA-TTTTAA s panTro5.chr4 86971500 123 + 194502333 CCCAGGAAACATTGTTTAAATTAATGAAGAGCATC-CATGG-GCAATGCATCTTCAAGAGCTCAAGATCTAGTG-------------------------AAAAAACAGAAGCAAAGAAGGAATTTCAATACAATGTGTTGAAGA-TTTTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87747734 123 + 195804263 CCCAGGAAACATTGTTTAAATTAATGAAGAGCATC-CATGG-GCAATGCATCTTCAAGAGCTCAAGATCTAGTG-------------------------AAAAAACAGAGGCAAAGAAGGAATTTCAATACAATGTGTTGAAGA-TTTTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 34104 122 + 36344 CCT-GAAAACATTGCTTAAATTAATGAAGACCATC-TATGG-GCAATGCATCTTCAAGAGCTCAAGATCTGGTG-------------------------AAAAAACGGAAACAAAGAAGAAATTTCAATACAATGTGATGAAAA-TTTTAA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42541780 122 + 85365473 CCA-GGAAACATTGTTTAAATTAATGAAGAGCATC-TATGG-GCAATGCACCTTCAAGAGCTCAAGATCTATTG-------------------------AAGAAACAGAAGCAAAGAAGGAATTTCAATACAGTGTGTTGAAGA-TTTTAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145387710 122 - 190429646 CCA-GAAAACACTGTTTAAATTAATGAAGAGCATC-CATGG-ACAATATGTCTTCAAGAGCTCAAGATCTAGTG-------------------------AAAAAATAGAAACAGAGAAGGAATTTCAATAGAATGTGTTGAAGA-TTTTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144413156 122 - 189454096 CCA-GAAAACACTGTTTAAATTAATGAAGAGCATC-CATGG-ACAATACGTCTTCAAGAGCTCAAGATCTAGTG-------------------------AAAAAATAGAAACAAAGAAGGAATTTCAATAGAATGTGTTGAAGA-TTTTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3526251 115 + 39453387 cct-gaAAATATTGCTT-AATTAATGAAGAACATCTTATGGCGCAATGCATCTTCAG-----TAAGATCTAGTG-------------------------GAAAAA-AGAAAC---GAAGAAATTTCAATACAATGTGATGAAGATTTTTAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1148940 122 + 25348628 CCA-GAAAACACTGTTTAAATTAATGAAGAGCATC-CATGG-ACAATACGTCTTCAAGAGCTCAAGATCTAGTG-------------------------AAAAAACAGAAACAAAGAAGGAATTTCAATAGAATGTGTTGAAGA-TTTTAG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5158211 122 + 48547382 CCA-GAAAACACTGTTTAAATTAATGAGGAGCATC-CATGG-ACAATACATCTTCAAGAGCTCAAGATCTAGTG-------------------------AAAAAACAGAAACAAAGAAGGAATTTCAATAGAATGTGTTGAAGA-TTTTAG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 62417 122 + 130402 CCA-GAAAACACTGTTTAAATTAATGAAGAGCATC-CGTGG-ACAATATGTCTTCAAGAGCTCAAGATCTAGTG-------------------------AAAAAACAGAAACAAAGAAGGAATTTCAATAGAACGTGTTGAAGA-TTTTAG i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4200597 120 + 12320365 CCA-GAAAACATTGTCTAAATTAATGAAGACTATC-catgg-gcaat--gtcttcaggagctcaagatctagtg-------------------------aaaaaacagaaacaaagaaggaatttcaatacaaTGTGTTGAAGA-TTTTAG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145666086 131 + 190850796 CCT-GAAAACATTGGTTAAGTTAATGAAAAGCATC-CATGG-GCAATGCGTTATCAAGAGCTCAAAATCTAGTGGGGAAAAA----------------AAAAAAACAGAAACAAAGCAGGAATTTCAATACAATGTGATAAAGA-TTTTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14571954 147 + 15139346 CCT-GAAAACATTGGTTAAATTGATGAAGAGCATC-CAAGG-GCAATGCGTCTTCAAGAGTTCAAGATCTAGTGGGAAaaaacaaaacaaaacaaaacaaaaaaacagaaacaaaGCAGGAATTTCAATACAATGTGATAAAGA-TTTTAG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 398362 138 + 3802414 CCT-GAAAACATTGGTTAAATCAATGAAGAGCATC-CACGG-GCAATGCGTCTTCAAGAGTTCAAGATCTAGTGGaaaaaaa---------aaaaaaaaaaaaaacagaaataaaGCAGGAATTTCAATACAATGTGATAAAGA-TTTTAG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9757474 139 + 11631747 ctg-aAAAACATTGGTTAAATTAATGAAAAGCATC-CATGG-GCAATGCTTCTTCGAGAGCTCAAGATCTAGTGGaaaaaaa--------aaaaaaaaaaaaaaacagaaacaaaGCAGGAATTTCAATACAATGTGATAAAGA-TTTTAG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21705523 121 - 63241923 CCT-GAAAATATTGGTTAAATTAATAAAGAAAATA-CCTGG-TCAAT--GTTTTCAAGAGTTCAAAGTCTACTG------------------------AAAGGAATAGAGACAAAGAGGGAATATTAATGCAAGGTGATGCATA-TTCTCA i canFam3.chr13 I 7 I 4212 s dasNov3.JH575793 117315 121 + 255898 CAT-GAAACTATTGATTAAATTAATAGgaagaata-taaga-tcaat--atcttctagagctcaaagtctaatg------------------------gaagggacataaacaaagaaggtattccaatacaaTGTCATAAAGA-TTTTAG i dasNov3.JH575793 C 0 I 3 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=1011192.000000 s hg38.chr9_KI270719v1_random 142481 91 + 176845 ATTATTTC--TCTCTTGCAAATTTCCATTGCTTGTTTGAACATTCAGGAGAATAGTACTGCTTTCCCATTGAATGTATAAATAAATGTAAGAA s panTro5.chr4 86971623 91 + 194502333 ATTATTTC--TCTCTTGCGAATTTCCATTGCTTGTTTGAACATTCAGGGGAATAGCACTCCTTTCCCATTAAATGAATAAATAAACATAAGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87747857 91 + 195804263 ATTATTTC--TCTCTTGCGAATTTCCATTGCTTGTTTCAACATTCAGGGGAATAGCACTCCTTTCCCATTAAATGAATAAATAAACATAAGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 34226 91 + 36344 ATTATTTC--TCTCTTGCAAATTTCCATTGCTTGTTTGAACATTCAGGAGAATAGTACTGCTTTCCCATTGAATGTATAAATAAATGTAAGAA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42541902 91 + 85365473 ATTATTTC--TCTCTTGCGAATTTCCATTGCTTGTTTGAACATTCAGGAGAATAGTATTCTTTTCCCATTAAATGTATAAATAGACATAAGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145387832 91 - 190429646 ATTATTTC--TCTCTTGCAAATTTCTGTTGTTTGTTTGAACATTCATGAGAATAGTACTCCTTTCCCATTAAATGTATAAATAAACATAAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144413278 91 - 189454096 ATTATTTC--TCTCTTGCAAATTTCTGTTGTTTGTTTGAACATTCATGAGAATAGTACTCCTTTCCCTTTAAATGTATAAATAAACATAAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3526366 90 + 39453387 ATTATTTC--TCTCTGGCGAATTTCCATTGCTTGTTTG-ACATTCAGGAGAATAGTACTCCTTTCCCATTAAATGTATATATAAATGTAAGAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1149062 91 + 25348628 ATTATTTC--TCTGTTGCAAATTTCTGTTGTTTGTTTGAACATTCATGAGGATAGTACTCCTTTCCCATTAAATGTATAAATAAACATAAGAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5158333 91 + 48547382 ATTATTTC--TCTCTTGCAAATTTCTGTTGCTTGTTTGAATATTCATGAGAATAGTACTCCTTTCCCATTAAAAGTATAAATAAACATAAGAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 62539 91 + 130402 ATTATTTC--TCTCTTGCAAATTTCTGTTGTTTGTTTGAACATTCATGAGAATAGTACTCCTTTCCCATTAAATGTATAAATAAACATAAGAA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4200717 91 + 12320365 ATTATTTT--TCTCTTGCGAATTTCCATTGCTTGTTTGAACATTCATGAGAATAGTACGCCTTTCCCATTAAATGTATAAATAAACATAAGAA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145666217 91 + 190850796 ATTCTTTC--TCTCTTGCAAATTTCCATTGCTTGTTTGAACATTCAGGAGAATAGTACTCCTTTCCCACTAAATGTATAAAAAAACATAAGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14572101 91 + 15139346 ATTCTTTC--TTTCTTGTGAATTTCCATTGCTTGTTTGAACACTCAGGAGAATGGTACTCCTTTCCCATTAAATGTATAAATAAACATAAGAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 398500 91 + 3802414 ATTCTTTC--TCCATTGTGAATTTCCATTGCTTATTTGAACACTCAGGAGAATAGTATGCCTTTCCCATTAAATGTATAAATAAACATAAGAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9757613 90 + 11631747 ATTCTTTC--TCTCTTGCGAATTTCCA-TGCTTGTTTGAACACTTGGGAGAATAGTACTCCTTTCCCATTAAATGTATAAATAAACATAAGAA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21709856 93 - 63241923 ACTATTTCTGTCTCTAGTGAATTTCCATTACTTGCTTGAACAATTGGGAGAATTGTGCCCTTTTTCTAATAAATGTATTAATAAACTTGAGAA i canFam3.chr13 I 4212 C 0 s dasNov3.JH575793 117439 91 + 255898 ATTTTTTT--TCCCATGTGAATTTCTATTATTTGGGTGATGATTCAAGAGAATTATATCCCTTCCCTTCTAAATGTATaaataaacataagaa i dasNov3.JH575793 I 3 I 128 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=1563725.000000 s hg38.chr9_KI270719v1_random 142572 158 + 176845 TGAA-----GGTTGGCCCTCCCT-CCAAA-TTCATTA-AACATTAAATTTTT-TAAGTAAAAGATAAGAGGGCTGTATGAAAATTAAAATTCATGATTACTTCCAATATAGAAAATAATTGAAATAGATAAAAACACAACCAAATAGAAATGGATATTGCTAAAAAT s panTro5.chr4 86971714 158 + 194502333 TGGA-----AGTTGACCCTCCCT-CCAAA-TTCATTA-AACATTAAAAATTT-TAAGAAAAAGATATGATGCCTGTATAAAAATTAAAAACCATAATTACTTCCAACATAGAAAATAATTGAAATAGATAAAAACACAACCAAATAGAAATGGATATTGCTAAAAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87747948 158 + 195804263 TGGA-----AGTTGACCCTCCCT-CCAAA-TTCATTA-AACATTAAAAATTT-TAAGTAAAAGATATGATGCCTGTATAAAAATTAAAAATCATAATTACTTCCAACATAGAAAATAATTGAAATAGATAAAAACACAACCAAATAGAAATGGATATTGCTAAAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 34317 158 + 36344 TGAA-----GGTTGGCCCTCCCT-CCAAA-TTCATTA-AACATTAAATTTTT-TAAGTAAAAGATAAGAGGGCTGTATGAAAATTAAAATTCATAATTACTTCCAATATAGAAAATAATTGAAATAGATAAAAACACAACCAAATAGAAATGGATATTGCTAAAAAT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42541993 158 + 85365473 TGGA-----AGTTGACCCTCCCT-CCAAA-TTCATTA-AACATTAAAAATTT-TAAGTAAAAGATACGACACCTGTATAAAAATTAAAATTCATAATTACTTCCAACATAGAAAATAATTGAAATAGATAAAAACACAACCAAATAGAAATGGATATTGCTAAAAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145387923 158 - 190429646 TGGA-----GGTTGATCCTTCCT-CCAAA-TTCATTA-AATATTAAATTTTT-TAAGTAAAAGATAAGAAAGCTGTATAAAGATTAAAATTCATAATTACTTCCAACATAGAAAATAATTGAAATAGATAAAAACACAACCAAACAGAAATGGATATTGCTAAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144413369 158 - 189454096 TGGA-----GGTTGATCCTTCCT-CCAAA-TTCATTA-AACATTAAATTTTT-TAAGTAAAAGATAAGAAAGCTGTATAAAGATTAAAATTCATAATTACTTCCAACATAGAAAATAATTGAAATAGATAAAAACACAACCAAACAGAAATGGATATTGCTAAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3526456 155 + 39453387 TGAG-----GGTTGGCCCTCCCT-CCAAATTTCATTA-AACATTAAATTTTT-AAAGT-AAAGATATGAGGGCTGTA-AAAAAATAAAATTTGTAATTACTTCCAATATAG-AAATAATTGAAATAGATAAAAACACAACCAAATAG-AATGGATATTGCTTAAAAT i macNem1.NW_012011022v1 C 0 I 728 s cerAty1.NW_012002843v1 1149153 158 + 25348628 TGGA-----GGTTGATCCTTCCT-GCAAA-TTCATTA-AACATTAAATTTTT-TAAGTAAAAGATAAGAAAGCTGTATAAAAATTAAAATTCATAATTACTTCCAACATAGAAAATAATTGAAATAGATAAAAACACAACCAAACAGAAATGGATATTGCTAAAAAT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5158424 158 + 48547382 TGGA-----GGTTGATCCTTCCT-CCAAA-TTCATTA-AACATTAAATTTTT-TAAGTAAAAGATAAGAAGGCTGTATAAAAATTAAAATTCATAATTACTTCCAACATAGAAAATAATTGAAATAGATAAAAACACAACCAAATAGAAATGGATATTGCTAAAAAT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 62630 158 + 130402 TGGA-----GGTTGATTCTTCCT-CCAAA-TTCATTA-AACATTAAATTTTT-TAAGTAAAAGATAAGAAAGCTGTATAAAAATTAAAATTCATAATTACTTCCAACATAGAAAATAATTGAAATAGATAAAAACACAACCAAACAGAAATGGATATTGCTAAAAAT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4200808 158 + 12320365 TGGA-----GGTTGACCCTCCCT-CCAAA-TTCATTA-AAAATTAAATTTTT-TAAGTAAAAGATAAGAAGGCTGTATAAAAATTGAAATTCATAATTATTTCCAACATAGAAAATAATTGAAATAGATAAAAACACAACCAAATAGAAATGGATATTGCTAAAAAT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145666308 158 + 190850796 TGAA-----GGTTGACCTTCCCT-CCTAA-TTTAACGTAATGTCAAATTACT-TAAGTAAAA-ATAAGAGGGCTGTATAAAAATTAAGCTTCATAATTACTTGCAGTATAGAAAACAATTGAAATAGATAAAAACACAACCAAATAGAAATGAATATTGCTAAAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14572192 158 + 15139346 TGAA-----GGTTGTCCTTTCCT-CCAAA-TTTAACATAAAAACAAA-TATT-TAAGTAAAAGATAAGAGGGCTGTATAAAAATTAAACTTCATAATTACTTGCAATATAGAAAATAATCAAAATAGATAAAAACACAACCAAATAGAAATGAATATTGCTAAAAAT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 398591 159 + 3802414 TGAA-----GGTCGACCTTCCCT-CCAAA-TTTAACATAACATCAAATTATT-TAAGTAAAAGACAAGAGGGCTGTATAAAAATTAAACTTCATAATTACTTGCAACATAGAAAAAAATTGAGATAGATAAAAACACAACCAAATAGAAACGAATATTGCTAAAAAT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9757703 159 + 11631747 TGAA-----GGTTAACCTTCCCT-CCAAA-TTTAATATAACATCAAATTATT-TAAGTAAAAGATAAGAGGGTTATATAAAAATTAAACTTCATAATTACTTGCAATATAGAAAATAATTGAAATAGATAAAAACACAACCAAATAGAAATGAATATTGCTAAAAAT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21709949 151 - 63241923 TAAACAGATGCTTGATTTCCCCTCCCAGA-TTTAACA---TATTATATTGTT-TAATTAAATG-TAGGAGGATTGAACAAAAATC----TTCATAACTGTGTGCAATACAGAAAATGATTGAAGTAGATGAAAGTGCAACTAACTAGAA------ATTATCAAAAAC i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 117658 155 + 255898 TGAA-----GGCTTGTTACTTCC-CCAAA-TTCAACA-AATAATAAAATTTTGCAGGTAAAATGTAGGATGTTTGTATAAAAGCATATCTTCACAATTGTTTCCA--ATGGAAAATGATTGAAG-AAATAAAAATACAAGTAAATAGAAATTGATTTCATTAACAT- i dasNov3.JH575793 I 128 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=942637.000000 s hg38.chr9_KI270719v1_random 142730 99 + 176845 TACCTTCTTAATTAAATTAGTAAAAAAAGTGAAATTATTGTTCTATCCATATTGGTGACATTGCTTCTTAAATTATTCAAATTAA---AATATATTCTACTG s panTro5.chr4 86971872 99 + 194502333 TACCTTCTTAATTAAATTACTAACAAAAGTGAAATTATTGTTCTATTCATATTGGTGACATTACTTCTTAAATTATTCAAATTAA---AATATATCCTATCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87748106 99 + 195804263 TACCTTCTTAATTAAATTACTAACAAAAGTGAAATTATTGTTCTATTCATATTGGTGACATTACTTCTTAAATTATTCAAATTAA---AATATATCCTATCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 34475 99 + 36344 CACCTTCTTAATTAAGTTAGTAACAAAAGTGAAATTATTGTTCTATCCATATTGGTGACATTGCTTCTTAAATTATTCAAATTAA---AATATATTCTACTG i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42542151 99 + 85365473 CATCTTCTTAATTAAATTACTAACAAAAGTGAAAGTATTGTTCTATTCATATTGGTGACATTGCTTTTTAAATTATTCAAATTAA---AATATATCCTACCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145388081 99 - 190429646 CACCTTCTTAATGAAATTAGTAACAAAAGTGAAATTATTGTTCTATTCATATTGGTGACATTACTTCTTAAATTGTTCAAATTAA---AATGTATCCTACCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144413527 99 - 189454096 CACCTTCTTAATGAAATTAGTAACAAAAGTGAAATTATTGTTCTATTCATATTGGTGACATTACTTCTTAAATTGTTCAAATTAA---AATGTATCCTACCT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012002843v1 1149311 99 + 25348628 CACCTTCTTAATGAAATTAGTAACAAAAGTGAAATTATTGTTCTATTCATATTGGTGACATTACTTCTTAAATTGTTCAAATTAA---AATGTATCCTACCT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5158582 99 + 48547382 CACCTTCTTAATGAAATTAGTAACAAAAGTGAAATTATTGTTCTATTCATATTGGTGACATTACTTCTTAAATTGTTCAAATTAA---AATGTATCCTACCT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 62788 99 + 130402 CACCTTCTTAATGAAATTAGTAACAAAAGTGAAATTATTGTTCTATTCATATTGGTGACATTACTTCTTAAATTGTTCAAATTAA---AATGTATCCTACCT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4200966 99 + 12320365 CACCTTCTTAATGAAATTAGTAACAAAAGTGAAATTATTGTTCTATTCATATTGGTGACATCACTTCTTAAATTATTCAAATTAA---AATGTATCCTACCT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145666466 99 + 190850796 CACTTCCTTAATTAAATTAGTAACAAAAGTAAAACTATTGTTCTATTTATATTGATGGCATTACTTCTTAAATTATTCAAATTGA---AATATATTCTACCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14572350 95 + 15139346 CACTTTCTTAATTAAA----TAACAAAAGTAAAACTATAGCTCTATTTATATTGATGACATTACTTCTCAAATTATTCAAATTGA---AATATATTCTACCT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 398750 99 + 3802414 CACTTTCTTAATTAAATTAGTAACAAAAGTAAAACTATTGTTCTGTTTATATTGATGACATTACTTCTTAAATTATTCAAATTAA---AATATATTCTACCC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9757862 99 + 11631747 CACTTTCTTAATTAAATTAGTAACAAAAGTAAAACTATTGTTCTATTTATATTGATGACATTACTTCTTAAATTATTCAAATTGA---AATATATTCTACCT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21710100 95 - 63241923 ---TACCTTAGTTAAATCAGTAATAAAAATGAAATTATTATTAT----ATACCAGATACCTTATTTTACAAGCTATTTATATTGGAACAACATATTCTACCT i canFam3.chr13 C 0 I 5 s dasNov3.JH575793 117813 95 + 255898 TACTTTCTTAATTTAATCATTAACAAAATTGAATATAGTATTTTCTATATATT----ACATTATTTTTTAAGCTTCTGAAATTGG---AATATATTCCACCT i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I e macNem1.NW_012011022v1 3526611 728 + 39453387 I a score=1809559.000000 s hg38.chr9_KI270719v1_random 142829 172 + 176845 -----GTGAGTTCAGG-AAAAATTGACAATAAAGGAATAGTATCATACACAAAGAAATATAACTCACTGTTTTAGCCTAGCAAC-T--AGTGTTTA-CAGAACAAGTTACAGATTATTCTGCAATATGAAACAATCCTAAAG-----TGTTTttaacctt-aaatcaaaattcaaattagaattagaa s panTro5.chr4 86971971 173 + 194502333 -----GTGAGTTCAAG-AAAAATTGACAATAAAGGGATAGCATCATACACAAAGAAATATAACTCACAGTTTTAGCCTAGCAACAA--AGTGTTTA-CAGAACAAGTTATAGATTATTCTGCAACACAAAACAATCCTAAAG-----TGTTTttaacctt-aaatcaaaattcaaattagaattagaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 87748205 173 + 195804263 -----GTGAGTTCAAG-AAAAATTGACAATAAAGGGATAGCATCATACACAAAGAAATATAACTCACAGTTTTAGCCTAGCAACAA--AGTGTTTA-CAGAACAAGTTATAGATTATTCTGCAACACAAAACAATCCTAAAG-----TGTTTTTAACCTT-aaatcaaaattcaaattggaattagaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 34574 171 + 36344 -----GTGAGTTCAGG-AAAAATTGACAATAAAGGAATAGTATCATACACAAAGAAATATAACTCACTGTTTTAGCCTAGCAAC-T--AGTGTTTA-CAGAACAAGTTACAGATTATT-TGCAATACGAAACAATCCTAAAG-----TGTTTttaacctt-aaatcaaaattcaaattagaattagaa i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42542250 173 + 85365473 -----GTGAGTTCAAG-AAAAATTGGCAATAAAGGGATAGCATCATACACAAAGAAATATAACTCACTGTTTTAGCCTAGCAACAA--AGTGTTTA-CAGAACAAGTTATAGATTATTCTGCAATACAAAACAATCCTGAAG-----TGTTTttaacctt-aaatcaaaattcaaattagaattagaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145388180 173 - 190429646 -----GTGAGTTCAAG-AAAAAATGACAATAAAGGAATAGCATCCTACACAAAGAAATATAACTCACAGTTTTAGCATAGCAACAA--AGTGTTTA-CAGAACAAGTTATAGATTATTCTGCAATACAAAATAATCCTAAAG-----TGTTtttaaactg-aaatcaaaattcaaattagaattagaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144413626 173 - 189454096 -----GTGAGTTCAAG-AAAAAATGACAATAAAGGAATAGCATCCTACACAAAGAAATATAACTCACAGTTTTAGCATAGCAACAA--AGTGTTTA-CAGAACAAGTTATAGATTATTCTGCAATACAAAATAATCCTAAAG-----TGTTtttaaactg-aaatcaaaattcaaattagaattggaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3527339 173 + 39453387 -----GTGAGTTCAAG-AAAAAATGACAATAAAGGAATAGCATCCTACACAAAGAAATATAACTCACAGTTTTAGCATAGCAACAA--AGTGTTTA-CAGAACAAGTTATAGATTATTCTGCAATACAAAATAATCCTAAAG-----TGTTtttaaactg-aaatcaaaattcaaattagaattagaa i macNem1.NW_012011022v1 I 728 C 0 s cerAty1.NW_012002843v1 1149410 162 + 25348628 -----GTGAGTTCAAG-AAAAAATGACAATAAAGGAAGAGCATCCTACACAAAGAAATATAACTCACAGTTTTAGCCTAGCAACAA--AGTGTTTA-CAGAACAAGTTACAGATTATTCTGCAATACGAAACAATTCTAAAG-----TGTTTTTAATC------TTAAAATTCAAATTA------GAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5158681 173 + 48547382 -----GTGAGTTCAAG-AAAAAATGACAATAAAGGAGTAGTATCCCACACAAAGAAATATAACTTACAGTTTTAGCCTAGCAACAA--AGTGTTTA-CAGAACAAGTTATAGATTATTCTGCAATACAAAATAATCCTAAAG-----TGTTtttaaactg-aaatcaaaattcaaattagaattagaa i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 62887 173 + 130402 -----GTGAGTTCAAG-AAAAAATGACAATAAAGGAATAGCATCCTACACAAAGAAATATAACTCACAGGTTTAGCCTAGCAACAA--AGTGTTTA-CAGAACAAGTTATAGATTATTCTGCAATACAAAATAATCCTAAAG-----TGTTtttaaactg-aaatcaaaattcaaattagaattagaa i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4201065 173 + 12320365 -----GTGAGTTCAAG-AAAAATTGACAATAAGGGAATAGCATCATACACAAAGAAATATAACTCACAGTTTTAGCCTAGCAACAA--GGTGTTTA-CAGAACAAGTTATAGATTATTCTGCAATACAAAATAATCCTAAAG-----TGTTTTTAAACTg-aaatcaaaattcgaattcgaattagaa i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145666565 167 + 190850796 -----TTGAGTTCAA--AATAATTGACAATAAAGGAATAATTTCATACACAAAGAAATATAATTCACATTTTTAGCCTAGCAACAA--ATCGTTTA-CAGAACAAGTTATATATTATTCTGCAATATAATACTATCCTAGCA-----TGTTTTAAACCTT------AAAATTCAAATTAGAATTATAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14572445 173 + 15139346 -----GTGAGTTCAA--AATAATTGACAATAAAGGAATAGTTTCATACACAAAGAAATATAACTCACATTTTTAGCCTAGCAACAA--ATCATTTACCAGAACAAGTTATAGATTATTCTGCAATAAAATATAATCCTAGCA-----TGTTTTTAACCTT-AAATCAAAATTCAAATTAGAATTATAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 398849 171 + 3802414 -----GTGAGTTCAA--AATAATTGACAATAAAGGAATAGTTTCCTACACAAAGGAATATAACTCACATTTTTAGCC-AACAACAA--ATCGTTTA-CAGAACAAATTATAGATTATTCTGCAATAAAATACAATTCTAGCA-----TGTTTTCAACCTT-aaataaaaattcaaattagaattataa i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9757961 172 + 11631747 -----GTGAGTTCAA--AATAATTGACAATAAAGGAATAGTTTCATACACAAAGAAATATAACTTACACTTTTAGCCTAGCAACAA--ATCATTTA-CAGAACAAGTCATAGATTATTCTGCAATAAAATACAATCCTAGCA-----TGTTttaaacctt-agatcaaaattcaaattagaattataa i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21710200 182 - 63241923 -----TTAAGTTCAGGAAAAAAAGGACAGTAAAAAAATGGTATCATACACAAAGAAGGGTAACTCACATTTTTAGTCTAACAACAAATAGTGTTTA-CAGAACAAGTTGTAGCTCATTCTGCGATACAAAACTATCCTGAGGGTTTTTCTTTTTCACCTTCAAATCAAAATTCAAATTAGAATCAGAA i canFam3.chr13 I 5 C 0 s dasNov3.JH575793 117908 177 + 255898 GGGAGTTAAATTCAGG-AAAAATTTACAATAAAGTAGTAATATCATACATGAAGAAATATACCTCACAATTTTAACCTAATAACAAATAATGTTTA--GGAACAAGTGATATTTCATTTTACAAAACAAAACAATCCTGAAT-------TTGTTACCTTC-AAATCAAAATTAAAAATAGAATTAGAG i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=1163230.000000 s hg38.chr9_KI270719v1_random 143001 90 + 176845 a----------------------------------------------------------tgaaaTGATGTTCTCATTTCAGCAATGAATACAGAAGTGAAATCACTTGATTTTTCTGAAGACTGTAT-TTTTCAGTGTTCATCTAGATT s panTro5.chr4 86972144 89 + 194502333 a----------------------------------------------------------tgaaaTGATGTTCTTATTTCAGCAATGAATACAGAAGTGAAATGATTTG-TTTTTCTGAAGACTGTAT-TTTTCAGTGTTCATCTGGGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87748378 89 + 195804263 a----------------------------------------------------------tgaaatGATGTTCTTATTTCAGCAATGAATACAGAAGTGAAATGATTTG-TTTTTCTGAAGACTGTAT-TTTTCAGTGTTCATCTGGGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 34745 90 + 36344 a----------------------------------------------------------tgaaaTGATGTTCTCATTTCAGCAATGAATACAGAAGTGAAATCACTTGATTTTTCTGAAGACTGTAT-TTTTCAGTGTTCATCTGGATT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42542423 89 + 85365473 a----------------------------------------------------------tgaaaTGATGTTCTTATTTCAGCAATGAATACAGAAGTGAAATGACTTG-TTTTTCTGAAGACTGTAT-TTTTCAGTGTTCATCTGGGTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145388353 90 - 190429646 a----------------------------------------------------------tGATATGATGTTCTTATTTCAGCAATGAATACAGAAGTGAAATGACTTGATTTTTCTGAAGACTGTAT-TTTTCAGTGTTCTTCTGGGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144413799 90 - 189454096 a----------------------------------------------------------tgaaaTGATGTTCTTATTTCAGCAATGAATACAGAAGTGAAATGACTTGATTTTTCTGAAGACTGTAT-TTTTCAGTGTTCTTCTGGGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3527512 90 + 39453387 a----------------------------------------------------------tgaaatGATGTTCTTATTTCAGCAATGAATACAGAAGTGAAATGACTTGATTTTTCTGACGACTGTAT-TTTTCAGTGTTCTTCTGGGTT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1149572 90 + 25348628 G----------------------------------------------------------TGAAATGATGTTCTTATTTCAGCAATGAATACAGAAGTGAAATGACTTGATTTTTCTGAAGACTGTAT-TTTTCAGTGTTCTTCTGGGTT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5158854 90 + 48547382 a----------------------------------------------------------tgaaatGATGTTCTTATTTCAGCAATGAATACAGAAGTGAAATGACTTGATTTTTCTGAAGACTGTAT-TTTTCAGTGTTCTTCTGGGTT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 63060 148 + 130402 atgaaatGATGTTCTTATTTCAGCAATGAATACAGAAGTGGATGTGTATAAGAGACAGGTGAAATGATGTTCTTATTTCAGCAATGAATACAGAAGTGAAATGACTTGATTTTTCTGACGACTGTAT-TTTTCAGTGTTCTTCTGGGTT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4201238 90 + 12320365 a----------------------------------------------------------tgaaatGATGTTCTTATTTCAGCAATGAATACAGAAATGAAATTACTTGATTTTTTTGAAGACTGTAT-TTTTCAGTGTTCTTCTGGGTT i colAng1.NW_012120821v1 C 0 C 0 s rhiBie1.NW_016832622v1 4265 90 + 5001 A----------------------------------------------------------TGAAATGATTTTTTTATTTCAGCAATGAATACAGAAGTGAAATGACTTGATTTTTCTGACGACTGTAT-TTTTCAGTGTTCATCTGGGTT i rhiBie1.NW_016832622v1 N 0 N 0 s calJac3.chr3 145666732 90 + 190850796 A----------------------------------------------------------TGAAATGATGTTCTTATTTTAACAATAAATACAGAAGTGAAATGACTTGATCTTTCTGAAGACTGTAG-TTTTCAGTGTTCATCTAGGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14572618 90 + 15139346 A----------------------------------------------------------TGAAATGATTTTCTTATTTTAACAATGAATACAGAAGTGAAATGACTCGCTCTTTCTGAAGACTGTAG-TTTTCCGTGTTCATCTGGGTT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 399020 90 + 3802414 a----------------------------------------------------------tgaaaTGATGTTCTTATTTTAACAATGAATACAGAAGGGAAATGACTTGGTCTTTCTGAAGACTGTAG-TTTTCAGTGTTCATCTGGGTT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9758133 90 + 11631747 a----------------------------------------------------------tgaaaTGATGTTCTTATTTTAACAATGAATACAGAAGTGAAATGACTTGATCTTTCTGAAGACTGTAG-TTTTCAGTGTTCATCTAGGTT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21710382 85 - 63241923 A----------------------------------------------------------TGAAATGATGTTCTTATTTCAGCAATGAATACATAAGTG-----ACTTGATTTTTCTTAAGACCGCAT-TTTTTAACGTTCATCTGGGTA i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 118085 91 + 255898 A----------------------------------------------------------TGAAATAATCTTCTTACTGCAAAAATGGATACGGAAGTGAAATGATGTGATTTTTCTGATGACTATATATTTTCAGTGTTAATCTGGATT i dasNov3.JH575793 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=11961209.000000 s hg38.chr9_KI270719v1_random 143091 1053 + 176845 TAACACTTTAAAGAATACCTTTT---ATTCCTTAAATAACATTCAGTTTGTGAAAGT-AAGCACACCTTTTTCAGCTCCGC---TTATTCTGCGGAAGGATCCTTCCATATCAAGGATTAACACAATATGCATCGTGGGTTCACAAAGTTC-AGTTTGCAGCTATCCTTAGCAAATCATG-GAACCATCTAGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCCATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTCCAGCAGAGTGGCACATCAAATGTGTT---ACTAGCTGTTCCTTTTCCTT-TGTATTTTTATAAAGACCCTTGGCTGGCAGAATGGAACAGAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCATACAGCTGGTTTACTTTGTTATAAT--AATATTTTATGTGGTACATGAAGACTTTGATCCCTTGACAAATGTCATTTGTAGGTGAGCAATTATTAATAGGATTGTAAGTCTTAATATGCAAGGATCACCATTAATAAAAGTAGATTAT---------------------------------TGTA-AAGTGAATTAGCAATAATTTTACTTATGAATAAAAACTTATACTATTTCAGGTCATTTTCTTATTGT-----TT----CTTGAAAAA------AGAAGTCCTTTATAAGTCCAGTTAAATATTACCTAATTTTTGCATCAAATTTCATGGTAAACAAGGCTTATT-TTCTTACTTTACTGATGTCTAAAAGCTAAATTTCACTGGTGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAGCTGAGACCCAAAATTTGTTATTTTCTTTATTTACAG--CACAATATTTTCCATCATGGTATATTACATCTTGCTAAAGAAGCTATGTTTCTTTAGCAAGACAATTGAAAAGCATAAACATTGGTTTAC----TAGAA--AGAT-TTTT-----AATATTCCATATTATTTACAACT--GTTTGCTTATTTCCATGTATAAAATGACATTGATTCAATAGAC-TTCTTCCACATTTGCATGATATTCAGCTATAACACTAACTCAGGCAATATTCATAT s panTro5.chr4 86972233 1062 + 194502333 TAACACTTTAAAGATTCTCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCCAC---TTATTCTGCAGAAGGAACCTTCCATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATGTTAAGCATTCTGAAGTTCATCAGAGTGGCATATCAAATGTGTT---ACTAGCTGTTCATTTTCCTT-CGTATTTTTATAAAGAGCCTTGACTGGCAGAATGGAACAGAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCACACAGCTGGTTTACTTTGTTGTAAT-AAACATTTTATGTGGTACATGAAGACTTTGATTCCTTGCCAAATGTCATGTGTAGGTGAGCAATTATTAATATGATTGTAAGTCTTAATATGCAAGTATCTCCATTAATAAAAGTAGACTGT---------------------------------TGTA-AAGTGAATTAGCAATCATTTTACTTATGAATAAAAACTTATACTATTTCAGGTCATTTTCTTATTGT-----TT----CTTGAAAAA------GGAAGTCCTTTATAAGTCCAGTGAAATATTACCTAATTTTCACATCAAATTTCATGGTAAACAAGACTTATTCTTCTTACTTTACTGATTTTAAAAAGCTAAATTTCACTGGGGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAACCAAGACCCAAAATTTGTTATTTTCTTTATTTCCAGCACACACTATTTTCCATCATGGTATATTACATCTTGCTAAAGAAGCAATGTTT-TTTAGCAAGACAACTGAAAAGCATGAACATTGGTTTACACTTTAGAA--AGATCTTTT-----AATATTCCATATCATTTACAACT--ATTTGTTTATTTCCATGCATAAAATGACATTGATTTAATAGAC-TTCATCCATATTTGCATGATACTCAGCTATACCACTAACTCAGGCACTATTCACAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87748467 1062 + 195804263 TAACACTTTAAAGATTCTCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCCAC---TTATTCTGCAGAAGGAACCTTCCATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATGTTAAGCATTCTGAAGTTCATCAGAGTGGCATATCAAATGTGTT---ACTAGCTGTTCATTTTCCTT-CGTATTTTTATAAAGAGCCTTGACTGGCAGAATGGAACAGAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCACACAGCTGGTTTACTTTGTTGTAAT-AAACATTTTATGTGGTACATGAAGACTTTGATTCCTTGCCAAATGTCATGTGTAGGTGAGCAATTATTAATATGATTGTAAGTCTTAATATGCAAGTATCTCCATTAATAAAAGTAGACTAT---------------------------------TGTA-AAGTGAATTAGCAATCATTTTACTTATGAATAAAAACTTATACTATTTCAGGTCATTTTCTTATTGT-----TT----CTTGAAAAA------GGAAGTCCTTTATAAGTCCAGTGAAATATTACCTAATTTTCACATCAAATTTCATGGTAAACAAGACTTATTCTTCTTACTTTACTGATTTTAAAAAGCTAAATTTCACTGGGGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAACCAAGACCCAAAATTTGTTATTTTCTTTATTTCCAGCACACACTATTTTCCATCATGGTATATTACATCTTGCTAAAGAAGCAATGTTT-TTTAGCAAGACAACTGAAAAGCATGAACATTGGTTTACACTTTACAA--AGATCTTTT-----AATATTCCATATCATTTACAACT--ATTTGTTTATTTCCATGCATAAAATGACATTGATTTAATAGAC-TTCATCCATATTTGCATGATACTCAGCTATACCACTAACTCAGGCACTATTCACAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 34835 1054 + 36344 TAACACTTTAAAGAATACCTTTT---ATTCCTTAAATAACATTCAGTTTGTGAAAGT-AAGCACACCTTTTTCAGCTCTGC---TTATTCTGCAGAAGGATCCTTCCATATCAAGGATTAACACAATATGCATCGTGGGTTCACAAAGTTC-AGTTTGCAGCTATCCTTAGCAAATCATGAGAACCATCTGGACTGACTGATGTGGAGATTGAAAGTAATTGATCCTGCCATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAGTGGCACATCAAATGTGTT---ACTAGCTGTTCATTTTCCTT-TGTATTTTTATAAAGACCCTTGGCTGGCAGAATGGAACAGAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCATACAGCTGGTTTACTTTGTTATAAT--AATATTTTATGTGGTACATGAAGACTTTGATCCCTTGACAAATGTCATTTGTAGGTGAGCAATTATTAATAGGATTGTAAGTCTTAATATGCAAGGATCACCATTAATAAAAGTAGACTAT---------------------------------TGTA-AAGTGAATTAGCAATAATTTTACTTATGAATAAAAACTTATACTATTTCAGGTCATTTTCTTATTGT-----TT----CTTGAAAAA------AGAAGTCCTTTATAAGTCCAGTTAAATATTACCTAATTTTTGCATCAAATTTCATGGTAAACAAGGCTTATT-TTCTTACTTTACTGATGTCTAAAAGCTAAATTTCACTGGTGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAGCTGAGACTCAAAATTTGTTATTTTCTTTATTTCCAG--CACAATATTTTCCATCATGGTATATTACATCTTGCTAAAGAAGCTATGTTTCTTTAGCAAGACAATTGAAAAGCATAAACATTGGTTTAC----TAGAA--AGAT-TTTT-----AATATTCCATATTATTTACAACT--GTTTGCTTATTTCCATGTATAAAATGACATTGATTCAATAGAC-TTCTTCCACATTTGCATGATATTCAGCTATAACACTAACTCAGGCAATATTCATAT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42542512 1059 + 85365473 TAACACTTTAAAGAGTCTCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCCAC---TTATTCTGCAGAAGGAACCTTCCATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATGTTAAGCATTCTGAAGTTCATCAGAGTGGCACATCAAATGTGTT---ACTAGCTGTTCATTTTCCTT-CGTATTTTTATAAAGAGCCTTGACTGGCAGAAGGGAACAGAAATAGAAGC------TAAAAGATCCAGATATTGATGTAGTGATCAAAGGCACACAGCTGGTTTACTTTGTTATAAC-AAACATTTTATGTGGTACATGAAGACTTTGGTTCCTTGCCAAATGTCATTTGTAGGTGAGCAATTACTTATAGGATTGTAAGTCTTAATATGCAAGGATCACCATTAATAAAAGTAGACAAT---------------------------------TGTA-AAGTGAATTAGCAATCATTTTACTTATGAATAAAAACTTATACTATTTCAGGTCATTTTCTTATTGT-----TT----CTTGAAAAA------TGAAGTCCTTTATAAGTCCAGTTAAATATTACCTAATTTTCACATCAAATTTCATGGTAAACAAGACTTACTCTTCTTACTTTACTGATTTTAAAAAGCTAAATTTAACTGGGGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAACCAAGACTGAAAATTTGTTATTTTCTTTATTTCCAGCACACAATATTTTCCATCATGCTATATTACATCTTGCTAAAGAAGCAATGTTTCTTTAGCAAGACAATTAAAAAGCATGAACATTGGTTTGC----TAGAA--AGATCTTTT-----AATATTCCATATCATTTACAACC--ATTTGTTTATTTCCATATATAAAATGACATTGATTTAACAGAC-TTTGTCCATATTTGCATGATATTCAGCTATACCACTAACTCAGGCACTATTCACAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145388443 1049 - 190429646 TAACAATTTAAAGAGTCCCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCTGC---TTATTCTGCAGAAGGACCCTTCTATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAGTTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAGTGGCACATCAAATGTGTT---ACTAGCTGTTTATTTCCCTT-CACATTTTTATAAAGAGCCTTGACTGGCAGAATGCAACATAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCACACAGCTGGTTAAGTTTGTTATAGT-AAACATTTTATGTGGTACATGAAGACTTTGATTCCTTGCCAAATGTCATTTGTAGGTGAGCAATTATTAACAGGATTGTACTTCTTAATACGCAAGGATCACCATTAATAAAAGTAGACTAT---------------------------------TGTA-AAGTGAGTTAGCAATCATTTTACTTATGAATAAAAACTTATACTATTTCAGGTAATTTTCTTATTGT-----TT----CTTGAAAAA------GGAAGTCCTTTATAAGTCCAGTTAAATATTACCTAATTTTCACATCAAATTTCATAGTAAACAAGACTTATTCTTCTTACTTTACCAATTTCAAAAAGCTAAATTTCACTGGGGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAACCAAGACCCCAAATGTGTTATTTTCTTTATTTTCAGCACACAATGTTTTCCATCATGATATATTACATCTTGCTAAAGAAGCAATGTTTCTTTAGCAAGATAATTGAAAAGCATGAACATTGGTTTAC----TAGAA--AGATCTTTT-----AATATTCCATATCATTTACAACT--AT----TTATTTCC------AAAATGACATTGACTTAATAGAC-TTCATCCATATTTGCATGATATTCAGCTATATCACTAACTCAGGCACTATTCACAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144413889 1049 - 189454096 TAACAATTTAAAGAGTCCCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCTGC---TTATTCTGCAGAAGGACCCTTCTATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAGTTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAGTGGCACATCAAATGTGTT---ACTAGCTGTTTATTTCCCTT-CACATTTTTATAAAGAGCCTTGACTGGCAGAATGCAACATAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCACACAGCTGGTTAAGTCTGTTATAGT-AAACATTTTATGTGGTACATGAAGACTTTGATTCCTTGCCAAATGTCATTTGTAGGTGAGCAATTATTAACAGGATTGTACTTCTTAATACGCAAGGATCACCATTAATAAAAGTAGACTAT---------------------------------TGTA-AAGTGAGTTAGCAATCATTTTACTTATGAATAAAAACTTATACTATTTCAGGTAATTTTCTTATTGT-----TT----CTTGAAAAA------GGAAGTCCTTTATAAGTCCAGTTAAATATTATCTAATTTTCACATCAAATTTCATAGTAAACAAGACTTATTCTTCTTACTTTACCAATTTCAAAAAGCTAAATTTCACTGGGGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAACCAAGACCCCAAATGTGTTATTTTCTTTATTTTCAGCACACAATGTTTTCCATCATGATATATTACATCTTGCTAAAGAAGCAATGTTTCTTTAGCAAGATAATTAAAAAGCATGAACATTGCTTTAC----TAGAA--AGATCTTTT-----AATATTCCATATCATTTACAACT--AT----TTATTTCC------AAAATGACATTGACTTAATAGAC-TTCATCCATATTTGCATGATATTCAGCTATATCACTAACTCAGGCACTATTCACAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3527602 1049 + 39453387 TAACAATTTAAAGAGTCCCTTTT---ATTCCTTAAATCATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCTGC---TTATTCTGCAGAAGGACCCTTCTATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAGTTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAGTGGCACATCAAATGTGTT---ACTAGCTGTTTATTTCCCTT-CACATTTTTAAAAAGAGCCTTGACTGGCAGAATACAACATAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCACACAGCTGGTTAAGTTTGTTATAGT-AAACATTTTATGTGGTACATGAAGACTTTGATTCCTTGCCAAATGTCATTTGTAGGTGAGCAATTATTAATAGGATTGTAAGACTTAATATGCAAGGATAACCATTAATACAAGTAGACTCT---------------------------------TGTA-AAGTGAATTAGCAATCATTTTACTTATGAATAAAAACTTATACTATTTCAGGTAATTTTCTTATTGT-----TT----CTTGAAAAA------GGAAGTCCTTTATAAGTCCAGTTAAATATTACCTAATTTTCACATCAAATTTCATAGTAAACAAGACTTATTCTTCTTACTTTACCAATTTCAAAAAGCTAAATTTCACTGGGGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAACCAAGACCCCAAATGTGTTATTTTCTTTATTTTCAGCACACAATGTTTTCCATCATGATATATTACATCTTGCTAAAGAAGCAATGTTTTTTTAGCAAGACAATTGAAAAGCATGAACATTGGTTTAC----TAGAA--AGATCTTTT-----AATATTCCATATCATTTACAACT--AT----TTATTTCC------AAAATGACATTGACTTAATAGAC-TTCATCCATATTTGCATGATATTCAGCTATACCACTAACTCAGGCACTATCCATAT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1149662 1037 + 25348628 TAACAATTTAAAGAGTCCCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCTGC---TTATTCTGCAGAAGGACCCTTCCACATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGACTGATGTGGAGATTGAAAGTAACTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAGTGGCATATCAAATGTGTT---ACTAGCTGTTCATTTCCCTT-CACATTTTTATAAAGAGCCTTGACTGGCAAAATGCAACATAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCACACAGCTGGTTAAGTTTGTTATAGT-AAACATTTTATGTGGTACATGAAGACTTTGATCCCTTGATAAATGTCATTTGTAGGTGAGCAATTATTAACAGGATTGTACTTCTTAATACGCAAGGATCACCATTAATAAAAGTAGACTAT---------------------------------TGTA-AAGTGAGTTAGCAATCATTTTACTTATGAATAAAAACTTATACTATTTCAGGTAATTTTCTTATTGT-----TT----CTTGAAAAA------GGAAGTCCTTTATAAGTCCAGTTAAATATTACCTAATTTTCACATCAAATTTCATAGTAAACAAGACTTATTCTTCTTACTTTACCAATTTCAAAAAGCTAAATTTCACTGGGGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAACCAAGACCCCAAATGTGTTATTTTCTTTATTTTCAGCACACAATATTTTCCATCATGATATATTACATCTTGCTAAAGAAGCAATGTTTCTTTAGCAAGACAATTGAAAAGCATGAACATTGGTTTAC----TAGAA--AGATCTTTT-----AATATTCCATATCATTTACAAC------------------------AAATGACATTGACTTAATAGAC-TTCATCCATATTTGCATGATATTCAGCTATATCACTAACTCAGGCACTATTCACAT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5158944 1054 + 48547382 TAACAATTTAAAGAGTCCCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCTGC---TTATTCTGCAGAAGGACCCTTCTATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAGTGGCACATCAAATGTGTT---ACTAGCTGTTCATTTCCCTT-CATATTTTTATAAAGAGCCTTGACTGGCAGAATGCAACATAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCACACAGATGGTTAAGTTTGTTATAGT-AAACATTTTATGTGATACATGAAGACTTTGATTCCTTGCCAAATGTCATTTGTAGGTGAGCAATTATTAACAGGATTGTACTTCTTAATATGCAAGGATCACCATTAATAAAAGTAGACTAT---------------------------------TGTA-AAGTGAGTTAGCAATCATTTTACTTATGAATAAAAACTTATACTATTTCAGGTAATTTTCTTATTGT-----TT----CTTGAAAAA------GGAAGTCCTTTATAAGTCCAGTTAAACATTACCTGATTTTCACATCAAATTTCATAGTAAACAAGACTTATTCTTCTTACTTTACCAATTTCAAAAAGCTAAATTTCACTGGGGATATATCATTTGTTTAAGACTAAGTAACTGATAACCTAAACCAAGACCCC-AATGTGTTATTTTCTTTATTTTCAGCACACAATATTTTCCATCATGATATATTGTATCTTGCTAAAGCAGCAATGTTTCTTTAGCAAGATAATTGAAAAGCATGAACATTGGTTTAC----TAGAA--AGATCTTTT-----AATATTCCATATCATTTACAACT--AT----TTATTTCCATGTATAAAATGACATTGACTTAATAGAC-TTCATCCATATTTGCATGATATTCAGCTATATCACTAACTCAGGCACTATTCACAT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 63208 1049 + 130402 TAACAATTTAAAGAGTCCCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCTGC---TTATTCTGCAGAAGGACCCTTCTATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAGTGGCACATCAAATGTGTT---ACTAGCTGTTCATTTCCCTT-CACATTTTTATAAAGAGCCTTGACTGGCAGAATGCAACATAAATAGAAGC------TAAAAGATCTAGATATTGATGTAGTGATCAAAGGCACACAGCTGGTTAAGTTTGTTATAGT-AAACATTTTATGTGGTACATGAAGACTTTGATTCCTTGCCAAGTGTCATTTGTAGGTGAGCAATTATTAACAGGATTGTACTTCTTAATACGCAAGGATCACCATTAATAAAAGTAGACTAT---------------------------------TGTA-AAGTGAGTTAGCAATCATTTTACTTATGAATAAAAACTTATACTATTTCAGGTAATTTTCTTATTGT-----TT----CTTGAAAAA------GGAAGTCCTTTATAAGTCCAGTTAAATATTACCTAATTTTCACATCAAATTTCATAGTAAACAAGACTTATTCTTCTTACTTTACCAATTTCAAAAAGCTAAATTTCACTGGGGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAACCAAGACCCCAAATGTGTTATTTTCTTTATTTTCAGCACACAATATTTTCCATCATGGTATATTACATCTTGCTAAAGAAGCAATGTTTCTTTAGCAAGATAATTGAAAAGCATGAACATTGGTTTAC----TAGAA--AGATCTTTT-----AATATTCCATATCATTTACAACT--AT----TTATTTCC------AAAATGACATTGACTTAATAGAC-TTCATCCATATTTGCATGATATTCAGCTATATCACTAACTCAGGCACTATTCACAT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4201328 1055 + 12320365 TAACAATTTAAAGAGTCCCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAATACACCTTTTTCAGCTCCGC---TTATTCTGCAGAAGGACCCTTCCATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAGTGGCACATCAAATGTGTT---ACTAGCTGTTCATTTCCCTT-CATATTTTTATAGAGAGCCTTGACTGGCAGAATGCAACATAAATAGAAGC------TAAAAGACCTAGATATTGATGTCGTGATCAAAGGCACACAGCTGGTTAAGTTTGTTATAAT-AAGCATTTTATGTGGTACATGAAGACTTTGATTCTTTGCCAAATGTCATTTGTAGGTGAGCAATTATTAATAGGACTGTACTTCTTAATATGCAAGGATCACCATTAATAAAAGTAGACTAT---------------------------------TGTA-AAGTGAGTTAGCAATCATTTTACTTATGAATAAAAATTTATACTATGTCAGGTAATTTTCTTATTGT-----TT----CTTGAAAAA------GGAAGTCCCTCATAAGTCCAGTTAAATATTACCTAATTTTCACATCAAATTTCATAGTAAACAAGACTTATTCTTCTTACTTTACTGATTTCAAAAAGCTAAATTTCACTGGGGATATATCATTTGTTTAAGACTAGGTAACTGATAACCTAAACCAAGACCCCAAATTTGTTATTTTCTTTATTTCCAGCACACAATATTTTCCATCATGATATATTACATCTTGCTAAAGAAGCAATGTTTCTTTAACAAGATAATTGAAAAGCATGAACATTGGTTTAG----TAGAA--AGATCTTTT-----AATATGCCGTATCATTCACAACT--AT----GTATTTCCATGTATAAAATGACATTGACTTAATAGAC-TTCATCCATATTTGCATGATATTCAGCTATATCACTAACTCAGGCACTATTCACAT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145666822 1041 + 190850796 TAACACTTTAAAGAGTCCCTTTTAAAATTCCTTAAATAATATTCAGTTTGTGAATGC-AAACACACCTTTTTCAGCTCCAC---TTATTCTGCAGAAGGAAACTTCCATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCTTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATAATATTAAGCATTCTGAAGTTCATCAGAATGACACATCAAATGTGTT---ACTAGCTCTTCATTTTCCTT-CATA-TTTTGCAGAGAGCCTTGACTGGCAGAATGGAACAGAAATAGACGC------TAAAAGACCTAGATGTTGATGTATTGATCAAAGACACACAGCTAATTTACTTTGTTATAAT-AAACATTTTATGTGGTACATGAAGAC--TGATTCCTTGCCAAGTGTCATCTGTAGGCGAGCAATTATTAATAGGATTGTAAGTCTTAATATGCAAGGATCACCATTAATAAAAGTAGATTAT---------------------------------TATA-AAGTGAATTAGCAATCATTTTACTTATGCATAAAAATTTATACTATTTCAGGTCATTTTCTCATTGT-----TT----CTTGAAAAA------ATAAGTCCTTTATAAATACAGTAAAATGTTACCTAATTTTCAAATCAAATTTTGTTTGAAACCAGGCTTATTCTT----CTTTACTTACTTTACAAAACTAAATTTCACTGGGAATATAACATTTGTTTAAGACTAGGTAAC----AATCTAAGACAAGACCCCAAATTTGTTATTTTCTTTATTTCCAGCACAC----------ATAATGCTATATTACATCTTGGTAAAGAAGCAATGCTTCTTTAGCAAGACAATTGGAAAACATGAACATTGGTTTAC----TAGAA--AGATTTTTA-----AATATTCCATATCATTTACAACT--ATTTGCTTATTTCCAGGTATAAAATGATATTGACTTAATAGAA-ATCTTCCACATTTGCATGATATTCAGCTATACCACTAACTCAGGCACTATTCACAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14572708 1042 + 15139346 TAACACTTTAAAGAGTCCCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCCAC---TTATTCTGCAGAAGGACACTTCCATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCTTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAATGACACATAAAATGTGTT---ACTAGCTCTTCATTTTTCTT-CATA-TTTTATAAAGAGC-----CTGGTAGAGTGGAACAGAAATAGAAGC------TAAAAGACATACATATTGATGTATTGATC--AGACACACAACTGATTTACTTTGTTATAAT-AAACATTTTATGTGGTACATGAAGAC-TTGATTCCTTGCCAGCTGTCATTTGTAGGTGAGCAATTATTAATAGGATTATAAGTCTTAATATGCAAGGATCACCATTAATAAAAGTAGATTAT---------------------------------TGTC-AAGTGAATTAGCAATCATTTTACTTATGTATAAAAACTTATACTATTTCAGGTCATTTTCTTATTGT-----TT----CTTGAAAAA-----TATAAGTCCTTTATAAATCCAGTTAAATATTACCTAATTTTCAAATCAAATTTTGTTTTAAGCGAGGCTTATTCTT---ACTTCACTGATTTTAAAAAGCTAAATTTCACTGGGAATATAACATTAGTTTAAGACTAGGTAAC----AATCTAAGACAAGATCCAAAATTTGTTATTTTCTTTATTTCCAGCACACAATATTTTCTATCATGCTATATTACATCTTGCTAAAGAAGCAATGTTTCTTTAGCAAGACAATTGGAAAACATGAACATTGGTTTAC----TAGAA--AGATTTTTT-----AATATTCCATATCATTTACAAC----TCTGCTTATTTCCAGGTATAAAATGACATTGATTCAATAGAC-TTCTTTCATATTTGCATGATATTCAGCTATACCACTAACTCAGACACTATTCACAT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 399110 1048 + 3802414 TAACACTTTAAAGAACCCCTTTT---ATTCCTTAAATAATATTTAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCCAC---TTGTTCTGCAGAAGGACACTTTCATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCTTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGGGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAATGACACATCAAATGTGTT---ACTTGCTCTTCATTTTCCTT-CATA-TTTTATAAAGAGCCTTGACTGGTAGAATGGAACAGAAATAGAAGC------TAAAAGATCTAGATATTGATGGGTTGATCAAAGACACACAGCTGATCTACTTTTTTATAAT-AAACATTTTATGTGGTACATGAAGACCTTGATTCCTTGCCAAGTGTCATTTGTAGGTGAGTAATTATTAAGAGGATTATAAATCTTAATATGCAAGGATCACCATTAGTAAAAGTAGATTAT---------------------------------TGTA-AAGTGAATTAGCAATCATTTTACTTATATATAAAAACTTATACTATTTCAGGTCATTTTCCTTTTGT-----TT----CTTGAAAAA-----AATAAGTCCTTTATAAGTCCAGTTAAATATTACCTAATTTTCAAATCAAATTTTGTTTTAAACAAGGCTTATTCTTCTTACTTTACTGATTTTAAAAAGCTAAATTTCACTGGAAATATAACA----TTTAAGACTAGGTAAC----AATCTAAGACGAGACCCAAAATTTGTTATTTTCTTTATTTCCAGCACACAATATTTTCCATCATGCTATATTACATCTTGCTAAAGAAGCAATGTTTCTTTAGCAAGACAATTGGAAAACATGAACATTGGTTTAC----TAGAA--AGATTTTTT-----AATATTCCATATCATTTACAACT--ATTTGCTTATTTCCAGGTATAAA---ACATTGAATCAATAGAC-TTCTTCCACATTTGCATGATATTCAGCTATACCACTAACTCAGGCACTATTCACAT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9758223 1054 + 11631747 TAACACTTTAAAGAGTCCCTTTT---ATTCCTTAAATAATATTCAGTTTGTGAATGT-AAACACACCTTTTTCAGCTCCAC---TTATACTGCAGAAGGACCCTTCCATATCAAGGATTAACACAATACGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCTTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTT-TGAAACATGAAATTAAACAAGATGATATTAAGCATTCTGAAGTTCATCAGAATGACACATCAAATGTGTT---ACTAGCTCTTCATTTTCCTT-CATA-TTTTATAAAGAGCCTTGACTGGCAGAATGGAACAGTAATAGAAGC------TAAAAGACCTAGATATTGATGTATTGATCAAAGACACACAGCTGATTTACTTTGTTATAAT-AAACATTTTATGTGGTACATGAAGACTTTGATTCCTTGCCAAGTGTCATTTGTAGGTGAGAAATTATTAATAGGATTGTAAGTCTTAATATGCAAGGATCACCATTAATAAAAGTAGATTAT---------------------------------TGTA-AAGCGAATTAGCAATCATTTTACTTATGTATAAAAACTTATACTATTTCAGGTCATTTTCTTATTGT-----TT----CTTGAAAAG------ATAAGTCCTTTATAAGTCCAGTTAAATATTACCTAATTTTCAAATCAAATTTTGTTTTAAACAAGGTTTATTCTTCTTACTTTACTGATTTTAAAAAGCTAAATTTCACTGGGAATATAACATTTGTTTAAGACTAGGTAAA----AATCTAAGACAAGACCCAAAATTTGTTATTTTCTTTATTTCCAGCACACAATATTTTCCATTATACTATATTACATCTTGCTAAAGAAGCAATGTTTCTTTAGCAAGACAATTGGAAAACATGAACATTAGTTTAC----TAGAA--AGATTTTTT-----AATATTCCATATCATTGACAACT--ATTTGCTTATTTCCAGGTATAAAATGACATTGATTCAATAGAT-TTCTTCCACATTTGCATGATATTCAGCTATACCACTAACTCAGGCACTATTCACAT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21710467 1094 - 63241923 TAACACTCTAAAGAGTCCCTTTC---AATCCTTAAAAGATATGCAGTTTGTGAATGTAAAACACACCTTTTTCAGCTCCAC---TTATTCTGCAGAAGGACCTTTCCATATCAAGGATTAACACAATATGCATCATGGGTTCAAAAATTTC-AATTTGCAGCTATCCTTAGCAAATAATGAGAACCATCTGGACTGATTGATGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTTATGAAACATGAAATTAAACAAGATGATATTAAGCATTCTAAAGTTCATCGGAATGACACACC-AATGTGTTACCACTAGCTGTTCATTTTCTTTATATA-------AAAAAGCCCTGACTGGAAAAATATAACAGAAATAGAAGCTAAAAATAAAAAATCTAGATATTGATGTATTGATCAAAGGTCCACAGCTGGTTTACTTTGTTACAAAAAAACATTCTATGTGGTGCA-AAAGTCTTTGATTTCTTGACAAATGTCACTTGCAGGTGAGACATTATTAATGGAATTATAATTACTAATATGCACAGATCACCCTTAAAAAGAGCaaattataaaaaaaataaaaaaataaaaaaGAGCAAATTATGTATAAAAGAATTAGCAATAACTTAACCTTTGAATAAAAGTTTACATTATTTCAGATCCTTTTCTTGCTATCTTCCTC----TTTGAAAAAAAAAAAAAAAGTGCTTCAGAAGGCCAGTTAAATATTGCCtgattttcacagcaaactttgaggtaaacagagtttattcttcccactttaaagat---aaatagctaaatctcccagaaactctatcatttgctctaggctaggtgaatggtagactgagctaagaatccaaagtttttacattttaaatttatagcctaaaatgtattctagtatatcacgttgcttcTTGATAAGGAAACA-------------CAGACAACTG-AAAGCATAAATATTGCTTTGC----TAGAA--AGTTTTTTTTCCCCAATATTCCATATCGCTAATGATTCCAT----TTATTTCCCTGTATAAAAAGACATTTATTTAGGGGAA-TTATTCCACATTTGTGTTGTATTCAACTACATCACTAACTTAGACATCATTCACAA i canFam3.chr13 C 0 C 0 s dasNov3.JH575793 118176 1032 + 255898 TTACATTGTAAAAAGTCCCTTTC---AAGCTTTAAAG-------AGCTTGTGGATGGAAAACCTGCTTTTTTCAGCTCCACTTATTATTCTGGAGAAGCA-CCTTCTATATCAAAGATTAACACAATATGCATCATTGTTTCAAAAATTTTAAATTTCTAATTATCTTTAGCAAATAACGAGAGCCATCTGGACTGATTGGTGTGGAGATTGAAAGTAATTGATCCTGCAATTGAGAAGCTTTTATGAAACATGAAATTAAACGAGATGATATTAAACATTCTAAAGTTCATCAAAAAGACACATCGAATGTGTT---ACTAACTGTTCATTTTCCTT-CATATTTATGTAAAGAAACTTGACTGGCAGAATGGAACCAAAATGGAAGC------TAAAAGATCTAGATATTGATGTTTCTATCAAAAGTCCACAGATGGTTT-CTTGGACACAAT-AAACATTTCATGTGGTACAAAAAGAT-----TTCCTTGCCAAATGTCACCTGTAAGTAAGCAATTACTAATAGGATAAAAATTATTAATATGCATAGATTACCCTTAAAGAAAACAATCTAT---------------------------------TTTGGAAGGGACTTAGTAGT-GTTTTACCTTAGAATAGAAATTTATATTATTTCAGGTCATTTTCTAATTAT-----CTCCCACTTGAAAAa------aagagcccttcacacagtcagttaaatattctctgatactcacagcaaaatt------aagtagggtttattcttcccattttgagggt---aaaatgcttaatcctccagag--------atttgctcaaggctaagtaagcagtagactgagttaagactc--gattttttatttttttaacttctggattacaatattttccatcataccatatagccACTTGCTAAGGAAACA------CTTTTCACGGACAATGGCAAAGCGTAAGTATTGCTCTAC----CACAGTTTTATTTTTC-----AATATATGATATTATTTGCAACC--CTTTGCTCATTTCCACATGTAAAAAGACATTGATTTGAGAGACTTTCTCCCACATTTACATGATATTCAGCTACATCTCTGAC-AAGGAACTATTCACGT i dasNov3.JH575793 C 0 N 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=123891.000000 s hg38.chr9_KI270719v1_random 144144 12 + 176845 GGCTCCAGAATT s panTro5.chr4 86973295 12 + 194502333 AGCTCCAGAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87749529 12 + 195804263 AGCTCCAGAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 35889 12 + 36344 GGCTCCAGAATT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42543571 12 + 85365473 GGCTCCAGAATT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145389492 12 - 190429646 GGCTCCAGAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144414938 12 - 189454096 GGCTCCAGAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3528651 12 + 39453387 GACTCCAGAATT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1150699 12 + 25348628 GGCTCCAGAATT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5159998 12 + 48547382 GGCTCCAGAATT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 64257 12 + 130402 GGCTCCAGAATT i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4202383 12 + 12320365 GGCTCCAGAATT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145667863 12 + 190850796 GGCTCCAGCATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14573750 12 + 15139346 GGCTCCAGAATT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400158 12 + 3802414 GGCTCCAGCATT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759277 12 + 11631747 GGCTCCAGCATT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21711561 11 - 63241923 ATCTCCAACAT- i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 696429 3757 + 1045278 I a score=27846.000000 s hg38.chr9_KI270719v1_random 144156 2 + 176845 AA s panTro5.chr4 86973307 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87749541 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 35901 2 + 36344 AA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42543583 2 + 85365473 AA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145389504 2 - 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144414950 2 - 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3528663 2 + 39453387 AA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1150711 2 + 25348628 AA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5160010 2 + 48547382 AA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 64269 2 + 130402 AA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4202395 2 + 12320365 AA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145667875 2 + 190850796 AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14573762 2 + 15139346 AA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400170 2 + 3802414 AA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759289 2 + 11631747 AA i aotNan1.NW_018493494v1 C 0 C 0 s tarSyr2.KE948818v1 700186 2 + 1045278 AA i tarSyr2.KE948818v1 I 3757 I 96774 s canFam3.chr13 21711572 2 - 63241923 AA i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I a score=1714135.000000 s hg38.chr9_KI270719v1_random 144158 160 + 176845 A-------CT--------GGT---ATCTGACCTCCCAATTGAATTAGAAGATAGGCATTTTGTGATTTGAGGAAGACATCCTGTGAATTTACAAATGTCCAGAAAGTTATACAAAAGAAAAACAAAATACTTTAGTCTAGTT-AAAAGTAGTGCTACTATTTCTTGAAATTCTGAAAGC s panTro5.chr4 86973309 179 + 194502333 ATCAATGTCTGACAAGAGGGTCCAATATGACCTCCCAATTGAAACAGAAGGCAGGCATTTTGTGATTTGAGGAAGACAACCTGTGAATTTACAAACGTCCAGAAAGTGATACAAAAGAAAAACAAAATACTTCAGCCTAGTTAAAAAGTAGTGCTACTCTTTCTTGAAATGCTTAAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87749543 179 + 195804263 ATCAATGTCTGACAAGAGGGTCCAATATGACCTCCCAATTGAAACAGAAGGCAGGCATTTTGTGATTTGAGGAAGACAACCTGTGAATTTACAAATGTCCAGAAAGTGATACAAAAGAAAAACAAAATACTTCAGCCTAGTTAAAAAGTAGTGCTACTCTTTCTTGAAATGCTTAAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 35903 160 + 36344 A-------CC--------GGT---ATCTGACCTCCCAATTGAATTAGAAGATAGGCATTTTGTGATTTGAGGAAGACATCCTGTGAATTTACAAATGTCCAGAAAGTTATACAAAAGAAAAACAAAAGACTTTAGTCTAGTT-AAAAGTAGTGCTACTATTTCTTGAAATTCTGAAAGC i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42543585 179 + 85365473 ATCAATGTTTGACAAGAGGGTCCAATATTACCTCTCAATTGAATTAGAAGACAGGCATTTTGTGATTTGAGGAAGACAACCTGTGAATTTACAAATGTCCAGAAAGTGATACAAAAGAAAAACAAAATACTTCAGCCTAGTTAAAAAGTAGTGCTACTATTTCTTGAAATGCTTAAAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145389506 179 - 190429646 ACCAATATCTGAGAAGAGGGTCCAATGTGACCTCCCAGTTGAATTAGAAGACAGGCATTTTGTGATTTGAGGAAGACATCCTGTGAATTTACAAATGTCCAGAAAGTGATACAAAAGAAAAACAAAATATTTCAGCCTAGTTAAAAAGTAGTGCTACTATTTCTTGAAATGCTTAAAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144414952 179 - 189454096 ACCAATATCTGACAAGAGGGTCCAATGTGACCTCCCAGTTGAATTAGAAGACAGGCATTTTGTGATTTGAGGAAGACATCCTGTGAATTTACAAATGTCCAGAAAGTGATACAAAAGAAAAACAAAATATTTCAGCCTAGTTAAAAAGTAGTGCTACTATTTCTTGAAATGCTTAAAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3528665 179 + 39453387 AGCAATATCTGACAAGAGGGTCCAATGTGACCTCCCAGTTGAATTAGAAGACAGGCATTTTGTGATTTGAGGAAGACATCCTGTGAATTTACAAATGTCCAGAAAGTGATACAAAAGAAAAACAAAATATTTCAGCCTAGTTAAAAAGTAGTGCTACTATTTCTTGAAATGCTTAAAGC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1150713 178 + 25348628 ACCAATATCTGACAAGAGGGTCCAATGTGACCTCCCAGTTGAATTAGAAGACAGGCATTTTGTGATTTGAGGAAGACATCCTGTGAATTTACAAATGTCCAGAAAGTGATACAAAAGAAAAACAAAAGACTTCAGTCTAGTT-AAAAGTAGTGCTACTATTTCTTGAAATGCTTAAAGC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5160012 179 + 48547382 ACCAATATCTGACAAGAGGGTCCAATGTGACCTCCCAGTTGAATTAGAAGACAGGCATTTTGTGATTTGAGGAAGACATCCTGTGAATTTACAAATGTCCAGAAAGTGATACAAAAGAAAAACAAAATATTTCAGCCTAGTTAAAAAGTAGTGCTACTATTTCTTGAAATGCTTAAAGC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 64271 179 + 130402 ACCAATATCTGACAAGAGGGTCCAATGTGACCTCCCAGTTGAATTAGAAGACAGGCATTTTGTGATTTGAGGAAGACATCCTGTGAATTTACAAATGTCCAGGAAGTGATACAAAAGAAAAACAAAATATTTCAGCCTAGTTAAAAAGTAGTGCTACTATTTCTTGAAATGCTTAAAGC i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4202397 179 + 12320365 ACCAATATCTGACAAGAGGGTCCAATGTGACCTCCCAGTTGAATTAGAAGACAGGAATTTTGTGATTTGAGGAAGACATCCTGTGAATTTACAAATGTCCAGAAAGTGATATAAAAGAAAAACAAAATATTTCAGCCTAGTTAAAAAGTAGTGCTACTATTTCTTGAAATGCTTAAAGC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145667877 178 + 190850796 ACCAATATCTGACAAGAGGGTCTAATGTGACTTCCCAATTGAATTAGAAGACAGGCATATTGTGATTTGAGGGAGACATCCTGTTAATTTACAAATATCCACAGAGTGATACAAAAGAAAAACCAAAGAATTCAGCCTAGTT-AAAAATACTGCTAATATTTCTTGAAATGCATAAAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14573764 178 + 15139346 ACCAGTATCTGACAAGAGGGTCTAATGTGACCTCCCAATTGAACTAGAAGACAGGCATTTTGTGATTTGAGGGAGACATCCTGTTAATTTACAAATGTCCACAAAGTGATACGAAAGAAAAATCAAAGAATTCAGCCTAGTT-TAAAATACTGCTTCTATTTCTTGAAACGCATAAAGC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400172 178 + 3802414 ACCAATATCTGACAAGAGGGTCTAAAGTGACCTCCCAATTAAATTAGAAGACAGGCATTTTGTGATTTGAGGGAGACATCCTGTTAATTTACAAATGTCCACAAAGTGACACAAAAGAAAAATCAAAGAATTCAGCGTAGTT-AAAAATACTGCTTCTATTTCTTGAAATTCGTAAAGT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759291 178 + 11631747 ACCAATATCTGACAAGAGGGTCTCATGTGACCACCCAATTGAAATAGAAGACAGGCATTTTGTGATTTGAGGGAGACATCCTGTTAATTTACAAATGTCCACAAAGTGATACAAAAGAAAAACCAAAGAATTCAGCCTAGTT-AAAAATACTGCTACTATTTCTTGAAATGCGTAAAGC i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21711574 166 - 63241923 AAGGACATCTGGCACCAGTGGCCAGTGTGAC-TCCAGCTTGAAAGAGAAGGCAGGCAATCTGTGACCTAAGGAAGACAT-CTGAGAATTTATGAATGTTCGGGAAGTAGTGTAAAAGAA-----AAAGATCTGAGCCTGGTAGAAA------GCTACCATTTCTGGAGATGCTTAACGC i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I a score=367943.000000 s hg38.chr9_KI270719v1_random 144318 37 + 176845 TGTACTAAGTATCACTCCTAAATCTGGGGATAAAGTA s panTro5.chr4 86973488 37 + 194502333 TGTAATAAGTATCATTCCCAAATCTGGCGATAAGATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87749722 37 + 195804263 TGTAATAAGTATCATTCCCAAATCTGGCGATAAGATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 36063 37 + 36344 TGTAATAAGTATCACTCCCAAATCTGGGGATAAAGTA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42543764 37 + 85365473 TGTAATAAGTATCATTCCCAAATCTGGGGATAAGATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145389685 37 - 190429646 TATAATAAGTATCATTCCCAAATCTGGGGATAAGATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144415131 37 - 189454096 TATAATAAGTATCATTCCCAAATCTGGGGATAAGATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3528844 37 + 39453387 TATAATAACTATCATTCCCAAATCTGGGGATAAGATA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1150891 37 + 25348628 TATAATAAGTATCATTCCCACATCTGGGGATAAGATA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5160191 37 + 48547382 TATAATAAGTATCATTCCCAAATCTGGGGATAAGATA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 64450 37 + 130402 TATAATAAGTATCATTCCCAAATCTGGGGATAAGATA i manLeu1.NW_012102858v1 C 0 C 0 s nasLar1.chrUn_JMHX01289230v1 145 37 + 439 TGTAATAAGTATCATTCCCAAATCTGGGGATAAGGTA i nasLar1.chrUn_JMHX01289230v1 N 0 C 0 s calJac3.chr3 145668055 36 + 190850796 TGTAATAAGTATGATTCCCAAATCTGGGGATAA-GTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14573942 37 + 15139346 TGTAATAAGTATGATTCCCAAATCTGGGGATAAGGTA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400350 37 + 3802414 TGTAATAAGTATGATTCCAAAATCTGGGAACAAGGTA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759469 37 + 11631747 TATAATAAGTATGATTCCCAAATCTGAGGATAAAGTA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21711740 34 - 63241923 ---TACAAGTATCTTCTCAAAATCGGAGCATAAGGTA i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 57118 6430 + 333214 I e eulMac1.LGHX01003138v1 56407 6250 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e colAng1.NW_012120821v1 4202576 0 + 12320365 C a score=4986.000000 s hg38.chr9_KI270719v1_random 144355 1 + 176845 C s panTro5.chr4 86973525 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 87749759 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 36100 1 + 36344 C i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42543801 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145389722 1 - 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144415168 1 - 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3528881 1 + 39453387 T i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1150928 1 + 25348628 T i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5160228 1 + 48547382 T i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 64487 1 + 130402 T i manLeu1.NW_012102858v1 C 0 C 0 s nasLar1.chrUn_JMHX01289230v1 182 1 + 439 C i nasLar1.chrUn_JMHX01289230v1 C 0 C 0 s calJac3.chr3 145668091 1 + 190850796 C i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14573979 1 + 15139346 C i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400387 1 + 3802414 C i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759506 1 + 11631747 C i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 62657 1 + 330844 C i eulMac1.LGHX01003138v1 I 6250 I 76 s eulFla1.LGHW01003172v1 63548 1 + 333214 C i eulFla1.LGHW01003172v1 I 6430 I 76 s canFam3.chr13 21711774 1 - 63241923 C i canFam3.chr13 C 0 C 0 e tarSyr2.KE948818v1 700188 96774 + 1045278 I e colAng1.NW_012120821v1 4202576 0 + 12320365 C a score=413803.000000 s hg38.chr9_KI270719v1_random 144356 37 + 176845 AGAAAATGGCATCTCCCAATATAATCTTGGACATATT s panTro5.chr4 86973526 37 + 194502333 AGAAAATGGCATCTCCCAATATAATCTTGGACATATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87749760 37 + 195804263 AGAAAATGGCATCTCCCAATATAATCTTGGACATATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 36101 37 + 36344 AGAAAATGGCATCTCCCAATATAATCTTGGACATATT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42543802 37 + 85365473 AGAAAATGGCATCTCCCAATATAATCTTGGACATATT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145389723 37 - 190429646 AGAAAATGGCATCTCCCAATGTAATCTTGGACATATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144415169 37 - 189454096 AGAAAATGGCATCTCCCAATGTAATCTTGGACATATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3528882 37 + 39453387 AGAAAATGGCATCTCCCAATGTAATCTTGGACATATT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1150929 37 + 25348628 AGAAAATGGCATCTCCCAATATAATCTTGGACATATT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5160229 37 + 48547382 AGAAAATGGCATCTCCCAATATAATCTGGGACATATT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 64488 37 + 130402 AGAAAATGGCATCTCCCAATATAATCTTGGACATATT i manLeu1.NW_012102858v1 C 0 C 0 s nasLar1.chrUn_JMHX01289230v1 183 37 + 439 AGAAAATGGCATCTCCCAATATAATCTTGGACATATT i nasLar1.chrUn_JMHX01289230v1 C 0 N 0 s calJac3.chr3 145668092 37 + 190850796 AGAAAATGGCATCTCTCAATAAAATCTTGGACATATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14573980 37 + 15139346 AGAAAATGACATTTTCCAATAAAATCTTAGACATATT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400388 37 + 3802414 AGAAAATGGCATCTCCCGATAAAATCTTGGACATATT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759507 37 + 11631747 AGAAAATGGCATCTCCCAATAAAATCTTGGACATATT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21711775 36 - 63241923 -AACAACGGCATCCTATGATATAATCTTGGACATCAT i canFam3.chr13 C 0 C 0 e eulFla1.LGHW01003172v1 63549 76 + 333214 I e eulMac1.LGHX01003138v1 62658 76 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e colAng1.NW_012120821v1 4202576 0 + 12320365 C a score=395891.000000 s hg38.chr9_KI270719v1_random 144393 39 + 176845 TGTCATTAAGAAGCACAATGAAATATGACAAATTGTACA s panTro5.chr4 86973563 39 + 194502333 TGTCAATAAGGAGTACAATGAAATATGACAAATTATACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87749797 39 + 195804263 TGTCAATAAGGAGTACAATGAAATATGACAAATTATACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 36138 39 + 36344 TGTCATTAAGAAGCACAATGAAATATGACAAATTGTACA i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42543839 39 + 85365473 TGTCAATAAGGAGTACAATGAAATATGACAAATTATACA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145389760 39 - 190429646 TGTCAGTAAGGAGTACAATGAAATATGGCAAACTATACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144415206 39 - 189454096 TGTCAGTAAGGAGTACAATGAAATATGGCAAACTATACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3528919 39 + 39453387 TGTCAGTAAGGAGTACAATGAAATATGGCAAACTATACA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1150966 39 + 25348628 TGTCAGTAAGGAGTACAATGAAATATGGCAAACTATACA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5160266 39 + 48547382 TGTCAATAAGGAGTACAATGAAATATGGCAAACTATACA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 64525 39 + 130402 TGTCAGTAAGGAGTACAATGAAATATGGCAAACTATACA i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4202576 39 + 12320365 TGTCAATAAGGAGTACAGTGAAATATGGCAAACTATACA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145668129 39 + 190850796 TGTCAATAAGGAGCACAATGAAACATGACAAATGGTACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14574017 39 + 15139346 TGTCAATAAGGAGCACAATGAAATATGACAAATGAAAGA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400425 39 + 3802414 TATCAATAAGAAGCACAATGAAATATGATAAATGATACT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759544 39 + 11631747 TGTCAATAAGGAGCACAATGAAATAGGACAAATGGTACA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21711811 39 - 63241923 TCTCAGTAAGGAGCACTATAAAATGTGACAAATTTTAAA i canFam3.chr13 C 0 I 2 e eulFla1.LGHW01003172v1 63549 76 + 333214 I e eulMac1.LGHX01003138v1 62658 76 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I a score=150739.000000 s hg38.chr9_KI270719v1_random 144432 15 + 176845 GCAACTTTTAAAAAT s panTro5.chr4 86973602 15 + 194502333 GCAAGTTTTAAAAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 87749836 15 + 195804263 GCAAGTTTTAAAAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 36177 15 + 36344 GCAACTTTTAAAAAT i gorGor5.CYUI01002260v1 C 0 C 0 s nomLeu3.chr20 42543878 15 + 85365473 GCAAGTTTTAAAAAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145389799 15 - 190429646 GCAAGTTTTAAAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144415245 15 - 189454096 GCAAGTTTTAAAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3528958 15 + 39453387 GCAAGTTTTTAAAAC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1151005 15 + 25348628 GCAAGTTTTAAAAAC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5160305 15 + 48547382 GCAAGTTTTAAAAAC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 64564 15 + 130402 GCAAGTTTTAAAAAC i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4202615 15 + 12320365 GCAAGTTTTAAAAAC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145668168 15 + 190850796 GCAACTTTTAAAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14574056 15 + 15139346 GCAACTTTAAAAAAT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400464 15 + 3802414 GCAACTTTTAAAAAT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759583 15 + 11631747 GCAACTTTTAAAAGT i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 62734 15 + 330844 TCAATTTTAAAAAAT i eulMac1.LGHX01003138v1 I 76 I 59716 s eulFla1.LGHW01003172v1 63625 15 + 333214 TCAATTTTAAAAAAT i eulFla1.LGHW01003172v1 I 76 N 0 s canFam3.chr13 21711852 14 - 63241923 GTGACCAAGAAAGA- i canFam3.chr13 I 2 C 0 e tarSyr2.KE948818v1 700188 96774 + 1045278 I a score=1305063.000000 s hg38.chr9_KI270719v1_random 144447 153 + 176845 TGCTAATAACTCT---TTGTTTATCTCAGTAGTAAAATTTAAATACTGATCCAACCTGACACATATGAACATAACATACCTATTCTGAAAGACAAAGAATATGTATCGATATTtatattatatttaatacaaatcatggaatatagaattatagaa s panTro5.chr4 86973617 149 + 194502333 TGCTAATAACTCT---TTGTTTATCTCAGTAATAAAATTTAAACACTGATCCAACCTAACACAGATGAACATAATATACCCATTCTGAAA-ACAAAGAATATATATCGATATTTA---TATATTAAATACAAATCATGGAATATAGAACTATAGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 87749851 149 + 195804263 TGCTAATAACTCT---TTGTTTATCTCAGTAATAAAATTTAAACACTGATCCAACCTAACACAGATGAACATAATATACCCATTCTGAAA-ACAAAGAATATATATCGATATTTA---TATATTAAATACAAATCATGGAATATAGAACTATAGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01002260v1 36192 152 + 36344 TGCTAATAACTCT---TTGTTTATCTCAGTAGTAAAATTTAAATACTGATCCAACCTGACACATATGAACATAACATACCTATTCTGAAAGACAAAGAATATGTAT-GATATTTATATTATATTTAATACAAATCATGGAATATAGAATTATAGAA i gorGor5.CYUI01002260v1 C 0 N 0 s nomLeu3.chr20 42543893 145 + 85365473 TGCTAATAACTC-------TTTATCTCAGTAATAAAATTTAAACACTAATCCAACTTAACACAGATGAACATAATATATCCATTCTGAAA-ACAAAGAatatatatcgatattta---tatattaaatacaaatcatggaatatagaactatagat i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145389814 144 - 190429646 TGCTAATAAC---------TTTATCTCAGTAACAAAATTTAAACACTGATCCAACCTAACACAGATGAACATAATATACCCATTCTGAAAGACAAAGAATATATATCGATATTTA---TACATTAAATAAAAATCATGGAATATAGAACTATAGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144415260 144 - 189454096 TGCTAATAAC---------TTTATCTCAGTAACAAAATTTAAACACTGATCCAACCTAACACAGATGAACATAATATACCCATTCTGAAAGACAAAGAACATATATCGATATTTA---TACATTAAATAAAAATCATGGAATATAGAACTATAGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3528973 144 + 39453387 TGCTAATAAT---------TTTATCTCAGTAACAAAATTTAAACACTGATCCAACCTAACACAGATGAACATAATATACCCATTCTGAAAGACAAAGAATATATATCGATATTTA---TACATTAAATAAAAATCATGGAATATAGAACTATAGAC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1151020 144 + 25348628 TGCTAATAAC---------TTTATCTCAGTAACAAAATTTAAACACTGATCCAACCTAACACAGGTGAACATAATATACCCATTCTGAAAGACAAAGAATATATATCGATATTTA---TACATTAAATACAAATCATGGAATATAGAACTATAGAC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5160320 144 + 48547382 TGCTAATAAC---------TTTATCTCAGTAACAAAATTTACACACTGATCCAACCTAACGCAGATGAACATAATATACCCATTCTGAAAGACAAAGAATATATATTGATATTTA---TACATTAAATACAAATCATGGAATATAGAACTATAGAC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012102858v1 64579 144 + 130402 TGCTAATAAC---------TTTATCTCAGTAACAAAATTTAAACACTGATCCAACGTAACACAGATGAACATAATATACCCATTCTGAAAGACAAAGAATATATATCGATATTTA---TACATTAAATACAAATCATGGAATATAGAACTATAGAC i manLeu1.NW_012102858v1 C 0 C 0 s colAng1.NW_012120821v1 4202630 144 + 12320365 TGCTAATAAC---------TTTATCTCAGTAACAAAATTTAAACACTAATCCAACCTAACACAGACAAACATAATATACCCATTCTGAAAGACAAAGAATATATATCAATCTTTA---TATATTAAATACAAATCATGGAATATGGAACTATAGAC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145668183 149 + 190850796 TGCTAGTAACTC-------TTTATCTCAGTAATAAAATTTAAACACTGATTCAACCTGACATAGATGAATATAATATACTTTTTTTGAAAGACAAATAATATGTATCAGTATTTATGTTATATTTAATACAATTCATGGAATATAGAATCATCAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14574071 144 + 15139346 TACTAATAACTC-------TTTATCTCAGTAATAAAATTTAAACACTGATTCAACCTGACATAGATG-----AATATCCTTATTTTGAAAGACAAATAATATGTATCAATATTTATGTTATATATAATATAATTCATGGAATATAGAATTATCAAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400479 149 + 3802414 TGCTAATAATTC-------TTTATCTCAGTAATAAAATTTAAATACTGATTCAACCTCACATAGATGAATATAATATACTTATTTTGAAAGACAAATAATATGTATAAATATTTATGTTATGTTTAATACAATTCATGGAATATAGAATTATCAAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759598 149 + 11631747 TGCTAATAACTC-------TTTATCTCAGTAATAAAATTTAAACACTGATTCAACCTGACATAGATGAATATAATATACTTATTTTGAAAGACAAATAATATGTATCAGTATTTATGTTATATTTAATACAATTCATGGAACATAGAATTATCAAA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21711866 145 - 63241923 AGCTAAGAATTCTTTGTTGTACATCTCAGTGCTGAAAGGAAAATA---ACCTAGCTTGACATCCAGAAACATAAT-CATGTATTCAGAAAGATGaa-------tattaatatttatattacattaaaaaCAAATCATATAATGTATAGTCATGGAA i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I a score=6280788.000000 s hg38.chr9_KI270719v1_random 144600 635 + 176845 tTGTGCCTATTTACCTA-GAAAATATTACCCCAGTTTTGTTTTTC-TAAGCTTCAAGAGAGATTTCTTGGAGAAAATGAGATTTTATAAGCAATGCTAGC---------A-AAAAAAGATAACTTAAAAGATTATGGAGAAAAAGGCGTATTTTAGATACAAAACACAGATTGAGAAACGCTTAGGGGCAAGAAGTAATGCATCACTGGCCAGTGTAAATGAACCGTTTAGGCAGTAAAATGTGTCCAAGCAAGTGGTGAGTATATCCTGTTCTCTTTTATATATCTAGACAAGTGATTTCAAACACCCACATGGAGCCCTGAGACCCTGGGTGTTCACCTAATGTAAGCCCCAATATAGGAGCTGAGGTCAAGTA-ATTGAGGGAATATGTCCAACAATCAATGAGCAAATTAGAATGAGCTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAACTGAGCAAACAACTCTCTCTAACTATGTAGGAAAAGTGTTAGTACTCAAATAAAAAGGTAAATTTAATAATCTGCTTAAGGCTGTATGAAAA--AAT-GAAGCAATGTGTATCAGGTTTCTTCAAATATATGCATATTGCAATCCACCCTTATAAGTAGTTTTACCCTCGATTGTAAGAGCTAAAAG s panTro5.chr4 86973766 641 + 194502333 TTGTGCATATTTTCCTA-GAAAATATTACCCCAATTTTGTTTCTC-TAAGCTTCAAGAGAGATTTCTTGAAGAAAATGAGATTTTATAAACAATGCTAGCAAAAAAAAAA-AAAAAAGACAACTTAAGAGATTATGGAGAAAAAGGCATACTTTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCGAGAAGTAATGCATCATTGACCAATGTAAATGAACCATTTGGGCAGTAAAATGTGTCCAAGAAAGTGGTGAGTCTATCCTATTCTCTTTTATATATCTAGACAAGTGATTTCAAACACCCACTTGGAGCCCTGAGACAGTGGGTGTTCACCTAATGTAAGCCCTAATATAGGAGCTGAGGTCAAT---ATTGAGTGAATATGTCCATCAATCAATCAATAAATTAGAGTGAACTAACTGTCACACATTCTTACCTTCATCCCTTTGCTGCATTAACTGAGCAAACATCTCTCTCTAACTAGATAGGAAAAGTTTTAGTACTCAAACAAAAAGCTAAAATTAATAATCTGCTTCAGGCTGTGTGCAAA--AAT-AAAGCAATGTGTACCAGGCTTCTTCAAATATATGCATATTGCAGTCTA-CCTTATAAGCAGATTTACTATCAATTATAAGAGCTAAAAG i panTro5.chr4 C 0 n 0 s panPan2.chr4 87750000 636 + 195804263 TTGTGCATATTTTCCTA-GAAAATATTACCCCAATTTTGTTTCTC-TAAGCTTCAAGAGAGATTTCTTGAAGAAAATGAGATTTTATAAACAATGCTAGC-----AAAAA-AAAAAAGACAACTTAAGAGATTATGGAGAAAAAGGCATACTTTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCGAGAAGTAATGCATCATTGACCAATGTAAATGAACCATTTAGGCAGTAAAATGTGTCCAAGAAAGTGGTGAGTCTATCCTATTCTCTTTTATATATCTAGACAAGTGATTTCAAACACCCACTTGGAGCCCTGAGACAGTGGGTGTTCACCTAATGTAAGCCCTAATATAGGAGCTGAGGTCAAT---ATTGAGTGAATATGTCCATCAATCAATAAATAAATTAGAGTGAACTAACTGTCACACATTCTTACCTTCATCCCTTTGCTGCATTAACTGAGCAAACATCTCTCTCTAACTAGATAGGAAAAGTTTTAGTACTCAAACAAAAAGCTAAAATTAATAATCTGCTTCAGGCTGTGTGCAAA--AAT-AAAGCAATGTGTACCAGGCTTCTTCAAATATATGTATATTGCAGTCTA-CCTTATAAGCAGATTTACTATCAATTATAAGAGCTAAAAG i panPan2.chr4 C 0 N 0 s gorGor5.CYUI01008057v1 1044 634 + 15539 tTGTACCTATTTACCTA-GAAAATATTACCCCAATTTTGTTTTTC-TAAGCTTCAAGAGAGATTTCTTGGAGAAAATGAGATTTTATAAGCAATGCTAGC---------A-AAAAAAGACAACTTAAAAGATTATGGAGAAAAAGGCGTATTTTAGATACAAAACACAGATTGAGAAACGCTTA-GGGCAAGAAGTAATGCATCACTGGCCAGTGTAAATGAACCGTTTAGGCAGTAAAATGTGTCCAAGCAAGTGGTGAGTATATCCTGTTCTCTTTTATATATCTAGACAAGTGATTTCAAACACCCACATGGAGCCCTGAGACCCTGGGTGTTCACCTAATGTAAGCCCCAATATAGGAGCTGAGGTCAAGTA-ATTGAGGGAATATGTCCACCAATCAATAAGCAAATTAGAATGAGCTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAACTGAGCAAACAGCTCTCTCTAACTATGTAGGAAAAGTGTTAGTACTCAAATAAAAAGGTAAATTTAATAATCTGCTTAAGGCTGTATGAAAA--AAT-GAAGCAATGTGTATCAGGTTTCTTCAAATATATGCATATTGCAATCCACCCTTATAAGTAGATTTACCCTCGATTGTAAGAGCTAAAAG i gorGor5.CYUI01008057v1 N 0 C 0 s nomLeu3.chr20 42544038 631 + 85365473 TTGTGCATATTTTCCTA-GAAAATATTACCCCAATTTTGTTTCTC-TACGCTTCA--AGAGATTTCTTGGAGAAAATGAGATTTTATAAGCAATGCTAGC--------AA-AAACAAGACAACTTAAGAGATTATGGAGAAAAAGGTATACTTTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCAAGAAGTAATGCATCATTGACCAATGTAAATGAACCATTTAGGCAGTAAAATGTGTCCAAGAAAGTGGGGAGTCTATCCTATTCTTTTTTATATATCTAGATAAGTGATTTCAAACACCCACATGGAGCCCTGAGACAGTGGGTGTTCACCCAATGTAAGCCCTAATATAGGAGCTGAGGTCAAT---ATTGAGTGAATATGTCCATCAATCAACAAATAAATTAGAGTGAGCTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAACTGAGCAAACATCTCTCTCTAACTAGATAGGAAAAGTTTTAGTACTCAAACAAAAAGGTAAAATTAATAATCTGCTTGAGGCTGTGTGCAAA--AAT-AAAGCAATGTGTACCAGGCTTCTTCAAATATATGCATATCGCAGTCTA-CCCTATAAGCAGACGTACTCTCAATTATAAGAGCTAAAAG i nomLeu3.chr20 C 0 I 94831 s rheMac8.chr5 145389958 631 - 190429646 TTGTGCACATTTACCTG-GAAAATATTACCCCAATTTTGTTTCTC-TAGGCTCCAAGAGAAATTTCTTGGAGAAAATGAGATTTTATAAACAATGCTAGC-----------AAAAAAGACAACTTAAGAAATTATGGAGAAAAAAGCATACTTTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCAAGAAGTAACGCATCATTGACCAGTGTAAATGAACCATTTAGGCAGTAAAATGTGTCCAAGAATGTGGTGAGTCTATCCAATTCTCTTTTATATATCTAGACAAGTGATTTCAAACACACACATGGAGCCCTGAGACAGTGGGTGTTCACCTAATGTAAGCCCTAATATAGGAGCTGAGGTCAAT---ATTGAGTGAATAAGTCTATCAATCAATAAATAAATTAGAATGAGCTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAACTGAGCAAACATCTCTCTCTAACTACATAGGGAAAGTTTTAGTACTCAAACAAAAAGGTAAAATTAATAATCTGCTTGAGGCTGTATGCAAA--AAT-AAAGCAATGTGTACCAGGCTTCTTCAAAGATATGCATATTGCAATCTA-CCTTATAAACAGATTTACTCTCAATTATAAGAACTAAAAG i rheMac8.chr5 C 0 N 0 s macFas5.chr5 144415404 630 - 189454096 TTGTGCACATTTACCTG-GAAAATATTACCCCAATTTTGTTTCTC-TAGGCTCCAAGAGAAATTTCTTGGAGAAAATGAGATTTTATAAACAATGCTAGC-----------AAAAAAGACAACTTAAGAAATTATGGAGAAAAAAGCATACTTTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCAAGAAGTAACGCATCATTGACCAGTGTAAATGAACCATTTAGGCAGTAAAATGTGTCCAAGAATGTGGTGAGTCTATCCAATTCTCTTTTATATATCTAGACAAGTGATTTCAAACACACACATGGAGCCCTGAGACAGTGGGTGTTCACCTAATGTAAGCCCTAATATAGGAGCTGAGGTCAAT---ATTGAGTGAATAAGTCTATCAATCAATAAATAAATTAGAATGAGCTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAACTGAGCAAACATCTCTCTCTAACTACATAGGG-AAGTTTTAGTACTCAAACAAAAAGGTAAAATTAATAATCTGCTTGAGGCTGTATGCAAA--AAT-AAAGCAATGTGTACCAGGCTTCTTCAAAGATATGCATATTGCAATCTA-CCTTATAAACAGATTTACTCTCAATTATAAGAACTAAAAG i macFas5.chr5 C 0 N 0 s macNem1.NW_012011022v1 3529117 631 + 39453387 TTGTGCACATTTACCTG-GAAAATATTACCCCAATTTTGTCTCTC-TAGGCTCCAAGAGAAATTTCTTGGAGAAAATGAGATTTTATAAACAATGCTAGC-----------AAAAAAGACAACTTAAGAAATTATGGAGAAAAAAGCATATTTTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCAAGAAGTAACGCATCATTGACCACTGTAAATGAACCATTTAGGCAGTAAAATGTGTCCAAGAATGTGGTGAGTCTATCCAATTCTCTTTTATATATCTAGACAAGTGATTTCAAACACACACATGGAGCCCTGAGACAGTGGGTGTTCACCTAATGTAAGCCCTAATATAGGAGCTGAGGTCAAT---ATTGAGTGAATAAGTCTATCAATCAATAAATAAATTAGAATGAGCTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAACTGAGCAAACATCTCTCTCTAACTACATAGGGAAAGTTTTAGTACTCAAACAAAAAGGTAAAATTAATAATCTGCTTGAGGCTGTATGCAAA--AAT-AAAGCAATGTGTACCAGGCTTCTTCAAAGATATGCATATTGCAATCTA-CCTTATAAACAGATTTACTCTCAATTATAAGAACTAAAAG i macNem1.NW_012011022v1 C 0 N 0 s cerAty1.NW_012002843v1 1151164 631 + 25348628 TTGTGCACATTTACCTG-GAAAATATTACCCCAATTTTGTTTCTC-TAGGCTCCAAGAGAAATTTCTTGGAGAAAATGAGATTTTATAAACAATGCTAGC-----------AAAAAAGACAACTTAAGAAATTATGGAGAAAAAAGCATACTTTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCAAGAAGTAACGCATCATTGACCAGTGTAAATGAACCATTTAGGCAGTAAAATGTGTCCAAGAATGTAGTGAGTCTATCCAATTCTCTTTTATATATCTAGACAAGTGATTTCAAACACACACATGGAGCCCTGAGACAGTGGGTGTTCACCTAATGTAAGCCCTAATATAGGAGCTGAGGTCAAT---ATTGAGTGAATAGATCTATCAATCAATAAATAAATTAGAATGAGCTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAACTGAGCAAACATCTCTCTCTAACTACATAGGAAAAGTTTTAGTACTCAAACAAAAAGGTAAAATTAATAATCTGCTTGAGGCTGCATGCAGA--AAT-AAAGCAATGTGTACCAGGCTTCTTCAAAGATATGCATATTGCAATCTA-CCTTATAAACAGATTTACTCTCAATTATAAGAACTAAAAG i cerAty1.NW_012002843v1 C 0 N 0 s chlSab2.chr27 5160464 631 + 48547382 TTGTGCACATTTACCTA-GAAAATATCACCCCAATTTTGTTTCTC-TAGGCTCCAAGAGAAATTTCTTGGAGAAAATGAGATTTTATAAACAATGCTAGC-----------AAAAAAGACAACTTAAGAAATTATGGAGAAAAAAGCATACTTTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCAAGAAGTAACGCATCACTGACCAGTGTAAATGAACCATTTAGGCAGTAAAATGTGTCCAAGAATGTGGTGAGTCTATCCAATTCTCTTTTATATATCTAGACAAGTGATTTCAAACACACACATGGAGCCCTGAGACAGTGGGTGTTCACCTAATGTAAGCCCTAATATAGGAGCTGAGGTCAAT---ATTGAGTGAATAAGTCTATCAATCAATAAATAAATTAGAATGAGCTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAACTGAGCAAACATCTCTCTCTAACTACATAGGAAAAGGTTTAGTACTCAAACAAAAAGGTAAAATTAATAATCTGCTTGAGGCTGTATGCAAA--AAT-AAAGCAATGTGTACCAGGCTTCTTCAAAGATATGCATATTGCAATCTA-CCTTATAAACAGATTTACTCTCAATTATAAGAACTAAAAG i chlSab2.chr27 C 0 N 0 s manLeu1.NW_012102858v1 64723 632 + 130402 TTGTGCACATTTACCTG-GAAAATATTACCCCAATTTTGTTTCTC-TAGGCTCCAAGAGAAATTTCTTGGAGAAAATGAGATTTTATAAACAATGCTAGC---------A-AAAAAAGACAACTTAAGAAATTATGGAGAAAAAAGCATACTTTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCAAGAAGTAACGCATCATTGACCAGTGTAAATGAACCATGTAGGCAGTAAAATGTGTCCAAGAATGTGGTGAGTCTATCCAATTCTCTTTTATATATCTAGAAAAGTGATTTCAAACACACACATGGAGCCCTGAGACAGTGGGTGTTCACCTAATGTAAGCCCTAATATAGGAGCTGAGGTCAAT---ATTGAGTGAATAGGTCTATCAATCAATAAATAAATTAGAATGAGCTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAACTGAGCAAACATCTCTCTCTAACTACATAGGAAAAGTTTTAGTACTCAAACAAAAAGGTAAAATTAATAATCTGCTTGAGGCTGTATGCAAA--AAT-AAAGCAATGTGTACCAGGCTTCTTCAAAGATATGCATATTGCAATCTA-CCTTATAAACAGATTTACTCTCAATTATAAGAACTAAAAG i manLeu1.NW_012102858v1 C 0 N 0 s colAng1.NW_012120821v1 4202774 626 + 12320365 TTGTGCATATTTACCTA-GAAAATATTACCCCAATTTTGTTTCTC-TAGGCTTCAAGAAAAATTTCTTGGAGAAAATGGGA-TTTATAAACAATGCTAGC-----------AAAAAAGACAACTTAAGAAATTATGGAGAAAAAAGCATACATTAGATGTAAAACACAGCTTGAGAAAAGCTTAGGGGCAAGAAGTAACGCATCGTCGACCAGTGTAAATGAACCATTTAGGCAGTAAAATGTGTCTAAGAATATGGTGAGTCTATCCTATTCTCTTTTATATATCTAGACAAGTGATTTCAAACACACACATGGAGCCCTGAGACAGTGGTTGTTCACCTAATGTAAGCCCTAATATAGGAGTTGAGGTCAGT---ATTGAGTGAATAAGCCTATCAATCAATAAATAAATTAGAATGAG----CTGTCACATATTCTTACCCTCCTCCCTTTACTGCATTAACTGAGCAAATATCTCTCTCTAACTACATAGGAAAAGTTTTGGTACTCAAACAAAAAGGTAAAATTAACAATCTGCTTGAGGCTGTATGCAAA--AAT-AAAGCAATGTGTATCAGGCTTCTTCAAAGATATGCATATTGCAATCTA-CCTTATAAACAGATTTACTCTCAATTATAAGAACTAAAAG i colAng1.NW_012120821v1 C 0 N 0 s calJac3.chr3 145668332 641 + 190850796 TTGTATATATTTACATA-GTAAATATTACCCCAACTTTGTTTCTC-TAAGCTTCAATAGCGATTTCTTGGATAAAATAAAATTTTGTAAGCAATGCTGGC---AAAAAAA-AAAAAAGATAATTTAAGAGATTAAGGAGAAAAAGGCATATTTTAGATATAAAACACAGCTTGACAAAAGCTTAGGGGCAAGAAGTAATGCATCACTGGCCAGTGTAAATTAAGCATTTAGGCGGTAAAATGTGTCCAATCAAGTGGTGAGTCTATCATATTCTCTTTTAAATATCTAGACAAGTTATTTCAAACAGCCACATGGAGCCCTGAGACACTGGGTGTTCACCTAATGTAAGCCCCAATATAAGAGCTGAGGTCAAGTA-ATTGAGTGAATATGTCCACCAATCAATAAGCAAATTAGAATAAATTAACTGTCATACA-TCTTACCCTCATCCCTTTGCTGTATTAACTGAGAAATCATCTCTCTCTAACTATATAGGAAAAGTTTTACTACTGAAATAAAAAGATA-AATTAATAATCTGCTTGATGCTGTATGCAAAATAATGGAAGCAATGTGTCTCAGGCTTCTTCAAACATATGCATATTGCAATCAA-CCTTATAAGTAGATTTACTCTCAATTATAAGAGTTAAAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14574215 620 + 15139346 TTGTACATATTTACCTA-GTAAATATTACCCCAACTTTGTTTCTC-TAAGCTTCAACAGATATTTCTTGGATAAAATGAAATTTTGTAAGCAATGCTAGC---AAAGAAA-AAGGA----AATTTAAGAGATTATGGAAAAAAAGGCATATTTTAAATATAAAACACAGTTTGAGAAAAGCTTAGGGGCAAGAAGTAATGCATCACTGGCCAGTGTAAATGAACCATTT-GGCAGTAAAACGTGTCCAATCAAGTGGTGAGTCTATCATATTCTCTTTTAAATATCTAGA----------CAAACAGCAACATGAAGCCCTGAGACACAGGGTGTTCACCTAATGTAAGCCCCAATATAAGAGCTGAGGTCAAGTA-ATTGAGTGAATATGTCCATCAATCAATAAGCAAATTAGAATAAATTGACCGTCACACATTCTTACCCTCATCCCTTTGCTGCATTAGCTGAGCAAACA----TCTCTAACTATATAGGAAAAGTTTTACTACTCAAATAAAAAGATACCATTAATAATCTGCTTGATGTTGTATGAAAA--AAT-GAAGTAAT-TGTCTCAGGCTTCTTCAAACATATGCATATTGTAATCAA-CCTTATAAGTAGATTTACTCTCAATTATAAGAATTAAAAG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 400628 636 + 3802414 TTGTACATATTTACCTA-GTAAATATTACTCCAACTTTGTTTCTC-TAAGCCTCAAGAGAGATTTCTTGGATAAAACGAAATTTTGTAAGCAATGCTAGC---AAAAAAACCAAAAAGACAATTTAATAAATTATGGAGAAAAAGGCATATTTTAGATATAAAACACAGCTTGAGAAAAGCTTAGGGGCAAGAAGTAATGCATCACTGGCCAGTGTAAATGAACCATTTAGGCAGTAAAATATGTCCAATCAAGTGGTGAGTCTATCGTATTCTCTTTTAAATATCTAGACAAGTTATTTCAAACAGCCACATGGAGCTCTGAGACACTGGGTGTTCACATAATGTAAGCCCCAATATAAGAGCTGAGGTCAAGTA-ATTAAGTGAATATGTCCATCAATCAATAAGCAAATTAGAATAAACTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGTATTAGCTGAGCAAACA----TCTCTAACTATATAGGAAAAGTTTTACTACTCAAATAAAAAGATAAAATTAATAATGTGCTTGATGCTGTATGAAAA--AAT-GAAGCAAT-TGTCTCAGGCTTCTTCAAACATATGCATATTGCAATCAA-CCTTATAAGTAGATTTATTCTCAATTATAAGAGTTAAAAG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9759747 639 + 11631747 TTGTATATATTTACCTA-GTAAATATTACCCCAACTTTGTTTCTC-TAAGCTTCAAGAGAGATGTCTTGGATAAAATGAAATTTTGTAAGCAATATTAGC---AAAAAAAAAAAAAAGATAAATTAAGAGATTATGGAGAAAAACGCATATTTTAGATATAAAATACAGCTTGAGAAAAGCTT-GGGGCAAGAAGTAATGCATCACTGGCCATTGTAAATGAACCATTTAGGCAGTAAAATGTGTCCAATCAAGTGGTGAGTCTATCATATTCTCTTTTAAATATCTAGACAAGTTATTTCAAACAGCCACACGGAGCCCTGAGACACTGGGTGTTCACCTAATGTAAGCCCCAATATAAGAGCTGAGGTCAAGTA-ATTGAGTGAATATGTCCATCAATCAATAAGCAAATTAGAATAAACTAACTGTCACACATTCTTACCCTCATCCCTTTGCTGTATTAACTGAGCAAACATCTCTCTCTAACTATATAGGAAAAGTTTTACTACTTAGATAAAAAGATA-AATTAACAATCTGCTTGATGCTGTATGAAAA--ATT-GAAGCAATGTGTCTCAGGCTTCTTCAAACATATGCATATTGTAGTCAA-CCTTATAAGTAGATTTACTCTCAATTATGAGAGTTAAAAG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21712011 589 - 63241923 TTATGCATATTTACATAGGGAAGCAATATCCT--TTTTGTTTCTCGTAAGCTGCTAGGGAGGTTTCATGTAGAAAATGCGATTTCATAAGCAATGCTAAG-----------AAAAAACACCTCTCGTGAGATTGTGGAGAAAATAGCATATTTCAGAAATAAAACACTCCCTGAGGAA-GCTCAGGGGCAAGAAATAATGCATCAAT------------------------------AGATGTGTCCATCCAAGTAGTGAGTCTACCCCATTCTGTTTCATCTATCTAGAC-AGTCATAACAAA-----ATTTGGGGCTCTCGGATGTTGGCTGTCTCCCTAATGTGGGTGTCCCTGCAGAAGCCAGGGTCAAGCACCCTGACTAGAGACGCCCTTTAGCCAATGAGCAAATTAGAATGA----ATTGTCATTCACTCTTACACTCATCTCTTTGCTGCCTTATTGGACCAAACCTGTTTCTCAAACTATGTAGGAAAAAAA-AAGTGCACAAATAAAA--GTGAAATTTATAACCTGCTTGAAGCTGGATGAGAA--AAG-GAAACCATGAGTTCC-TGCTTCTTCAAAGAAATGCCTATTACGTTCCT-CTTCCAGGGTAGATTTACCCTTGGTCATAAGTGCTAAAAA i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I a score=4011.000000 s hg38.chr9_KI270719v1_random 145235 2 + 176845 CA s gorGor5.CYUI01008057v1 1678 2 + 15539 CA i gorGor5.CYUI01008057v1 C 0 C 0 s calJac3.chr3 145668973 2 + 190850796 CA i calJac3.chr3 C 0 I 99527 s saiBol1.JH378162 14574835 2 + 15139346 CA i saiBol1.JH378162 C 0 I 79482 s cebCap1.NW_016107603v1 401264 2 + 3802414 CA i cebCap1.NW_016107603v1 C 0 I 85815 s aotNan1.NW_018493494v1 9760386 2 + 11631747 CA i aotNan1.NW_018493494v1 C 0 I 84291 s canFam3.chr13 21712600 2 - 63241923 CA i canFam3.chr13 C 0 I 75549 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e nomLeu3.chr20 42544669 94831 + 85365473 I e panTro5.chr4 86974407 0 + 194502333 I a score=27444.000000 s hg38.chr9_KI270719v1_random 145237 299 + 176845 ggccgggcacggtggctcatgcctataatcccagcactttgggaagctgaggtgggcggatcacgaggtcaggagatcaagaccatcctgtctaacatggtgaaccccgtctctactaaaaatgcaaaaaattagttgggtgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagagtggcgtgaacccgggaggcagaggttgcagtgagccgagatcacaccactgtactccagcctgggcgacaggacgagactctgtctcaagaaaaaaaaaaaaaaaa s gorGor5.CYUI01008057v1 1680 298 + 15539 ggccgggcacggtggctcatgcctataatcccagcactttgggaggctgaggtgggcggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaaccccgtctctactaaaaatacaaaaaattagttgggtgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagagtggcgtgaacccgggaggcagaggttgcagtgagccgagatcacaccactgtactccagcctgggcgacagaacgagactctgtctcaag-aaaaaaaaaaaaaaa i gorGor5.CYUI01008057v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I e aotNan1.NW_018493494v1 9760388 84291 + 11631747 I e cebCap1.NW_016107603v1 401266 85815 + 3802414 I e saiBol1.JH378162 14574837 79482 + 15139346 I e calJac3.chr3 145668975 99527 + 190850796 I e nomLeu3.chr20 42544669 94831 + 85365473 I e panTro5.chr4 86974407 0 + 194502333 I a score=2075.000000 s hg38.chr9_KI270719v1_random 145536 3 + 176845 agg s gorGor5.CYUI01008057v1 1978 3 + 15539 agg i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42639500 3 + 85365473 AGA i nomLeu3.chr20 I 94831 C 0 s macFas5.chr5 144532465 3 - 189454096 AGA i macFas5.chr5 N 0 C 0 s calJac3.chr3 145768502 3 + 190850796 AGT i calJac3.chr3 I 99527 C 0 s saiBol1.JH378162 14654319 3 + 15139346 AGT i saiBol1.JH378162 I 79482 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I e aotNan1.NW_018493494v1 9760388 84291 + 11631747 I e cebCap1.NW_016107603v1 401266 85815 + 3802414 I e panTro5.chr4 86974407 0 + 194502333 I a score=84723.000000 s hg38.chr9_KI270719v1_random 145539 10 + 176845 aaaCATTCTG s panTro5.chr4 87080666 10 + 194502333 AAACATTCTG i panTro5.chr4 n 0 C 0 s panPan2.chr4 87856821 10 + 195804263 AAACATTCTG i panPan2.chr4 N 0 C 0 s gorGor5.CYUI01008057v1 1981 10 + 15539 aaaCATTCTG i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42639503 10 + 85365473 AAACATTCTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145505079 10 - 190429646 AAACATTCCA i rheMac8.chr5 N 0 C 0 s macFas5.chr5 144532468 10 - 189454096 AAACATTCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647207 10 + 39453387 AAACATTCCA i macNem1.NW_012011022v1 N 0 C 0 s cerAty1.NW_012002843v1 1266484 10 + 25348628 AAACATTCCA i cerAty1.NW_012002843v1 N 0 C 0 s chlSab2.chr27 5267378 10 + 48547382 AAACATTCCA i chlSab2.chr27 N 0 C 0 s manLeu1.NW_012101853v1 40913 10 + 294823 AAACATTCCA i manLeu1.NW_012101853v1 N 0 C 0 s calJac3.chr3 145768505 10 + 190850796 AAACATTCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654322 10 + 15139346 AAACATTCTG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487081 10 + 3802414 AAACATTCTG i cebCap1.NW_016107603v1 I 85815 C 0 s aotNan1.NW_018493494v1 9844679 10 + 11631747 AAACATTCTG i aotNan1.NW_018493494v1 I 84291 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I a score=407428.000000 s hg38.chr9_KI270719v1_random 145549 42 + 176845 CAAATGTTGAATTTAAATGCATATTTCTGCTTTCATATAGCT s panTro5.chr4 87080676 42 + 194502333 CAAATGTTGAATTTAAATACATATTTCAGCTTTCATATAGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87856831 42 + 195804263 CAAATGTTGAATTTAAATGCATATTTCAGCTTTCATATAGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 1991 42 + 15539 CAAATGTTGAATTTAAATGCATATTTCTGCTTTCATATAGCT i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42639513 42 + 85365473 CAAATGTTGAATTTAAATGCATATTTCAGCTTTCATATAGCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145505089 42 - 190429646 CAAATGTTGAATTTAAATGCATATTCCAGCTTTCATATAGCT i rheMac8.chr5 C 0 I 67 s macFas5.chr5 144532478 42 - 189454096 CAAATGTTGAATTTAAATGCATATTCCAGCTTTCATATAGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647217 42 + 39453387 CAAATGTTGAATTTAAATGCATATTCCAGCTTTCATATAGCT i macNem1.NW_012011022v1 C 0 I 63 s cerAty1.NW_012002843v1 1266494 42 + 25348628 CAAATGTTGAATTTAAATGCATATTCCAGCTTTCATATAGCT i cerAty1.NW_012002843v1 C 0 I 79 s chlSab2.chr27 5267388 42 + 48547382 CAAATGTTGAATTTAAATGCATATTCCAGCTTTCATATAGCT i chlSab2.chr27 C 0 I 79 s manLeu1.NW_012101853v1 40923 42 + 294823 CAAATGTTAAATTTAAATGCGTATTCCAGCTTTCATATAGCT i manLeu1.NW_012101853v1 C 0 I 69 s colAng1.NW_012120821v1 4313973 42 + 12320365 CAAATGTTGAATTTAAATGCATATTCCAGCTTTCATATAGCT i colAng1.NW_012120821v1 N 0 I 82 s calJac3.chr3 145768515 42 + 190850796 CAAATGTTGTATTTAAATGCAATTTTCAGGTTTCATGTAGCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654332 42 + 15139346 CAAATGTTGAATTTAAATGCAATTTACAGATTTCATATAGCT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487091 42 + 3802414 CAAATGTTGAACTTAAATGCAATTTTCAGGTTTCATATAGCT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9844689 42 + 11631747 CAACTGTTGAATTTAAATGCAATTTTCAGGTTTCATATAGCT i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I a score=110694.000000 s hg38.chr9_KI270719v1_random 145591 92 + 176845 TAT--ATGATAATAAAGCTATATGCACCAGCAGAT-ATATT--GTTTTATATTATA-TAACATAT-TATACATATTT--------TACACTGGATAATGGATAAATG s panTro5.chr4 87080718 83 + 194502333 AA-------------------ATGCACTAACTGat-atattaagttttctattata-tagcatat-tatatatatat--ataaaatataCTGGATAATGTAAAAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87856873 85 + 195804263 AA-------------------ATGCACTAACTGAT-ATATTAAGTTTTCtattata-tagcatat-tatatatatatatataaaatataCTGGATAATGTAAAAATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 2033 93 + 15539 TAT--ATGATATTAAAGCTATATGCACCAGCAGAT-ATATTAAGTTTTATATTATA-TAACATAT-T-TATATATTT--------TACACTGGATAATGGAAAAATG i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42639555 87 + 85365473 AA-------------------ACGCACTCACTGAT-ATGTTAAGTCTTATATAACATTtatatatatatatatatatatatataatataCTAGATAATGTAAAAATG i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144532520 65 - 189454096 AA-------------------ATGCACCAGCTGATAatattaagttttatattata-taacatat-tttatatatat-------------------aGAGAGAGA-- i macFas5.chr5 C 0 C 0 s calJac3.chr3 145768557 81 + 190850796 --TACATATTATAAAAGCTATATACACTAGCTAAT-ATAGC----tttatat--ta-taatatat----------at------aatGTACTAGATAATATTAAAATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654374 84 + 15139346 --TACATATTATAAAAGCTATATGCATTATCTGat-atatt----tttatactata-taatatat----------at-----aaatttactagataatataaaattG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487133 83 + 3802414 --TACATATTAGAAAAGCTATATGCATTAGCCGat-atatt----tttatattata-taatatat----------at------aatgcactagataatataaaaatg i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9844731 83 + 11631747 --TACATATTATAAAAGCTATATGCACTAGCTGat-atatt----tttatattata-taatatat----------at------aatgtactagataatataaaaatg i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I e colAng1.NW_012120821v1 4314015 82 + 12320365 I e manLeu1.NW_012101853v1 40965 69 + 294823 I e chlSab2.chr27 5267430 79 + 48547382 I e cerAty1.NW_012002843v1 1266536 79 + 25348628 I e macNem1.NW_012011022v1 3647259 63 + 39453387 I e rheMac8.chr5 145505131 67 - 190429646 I a score=10500.000000 s hg38.chr9_KI270719v1_random 145683 1 + 176845 G s panTro5.chr4 87080801 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 87856958 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 2126 1 + 15539 G i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42639642 1 + 85365473 G i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145505198 1 - 190429646 G i rheMac8.chr5 I 67 C 0 s macFas5.chr5 144532585 1 - 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647322 1 + 39453387 G i macNem1.NW_012011022v1 I 63 C 0 s cerAty1.NW_012002843v1 1266615 1 + 25348628 G i cerAty1.NW_012002843v1 I 79 C 0 s manLeu1.NW_012101853v1 41034 1 + 294823 G i manLeu1.NW_012101853v1 I 69 C 0 s colAng1.NW_012120821v1 4314097 1 + 12320365 G i colAng1.NW_012120821v1 I 82 C 0 s calJac3.chr3 145768638 1 + 190850796 G i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654458 1 + 15139346 G i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487216 1 + 3802414 g i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9844814 1 + 11631747 g i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I e chlSab2.chr27 5267430 79 + 48547382 I a score=442867.000000 s hg38.chr9_KI270719v1_random 145684 43 + 176845 TACCTATTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA s panTro5.chr4 87080802 43 + 194502333 TACCTATTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87856959 43 + 195804263 TACCTATTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 2127 43 + 15539 TACCTATTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42639643 43 + 85365473 TACCTATTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chr5 145505199 43 - 190429646 TACCTAGTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144532586 43 - 189454096 TACCTAGTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647323 43 + 39453387 TACCTAGTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1266616 43 + 25348628 TACCTAGTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5267509 43 + 48547382 TACCTAGTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i chlSab2.chr27 I 79 C 0 s manLeu1.NW_012101853v1 41035 43 + 294823 TACCTAGTATGTTGGTGACCACAATTTTGGCAGCCTTAGAAAA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4314098 43 + 12320365 TACCTATTATGTTGGTGACCACAATTTTGGCAGTCTTAGAAAA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145768639 43 + 190850796 TATCTATTATATTGGTGATCACAATTTTGTCAGCCATAGAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654459 43 + 15139346 TACCTATTATATTGGTGATCACAATTTTGGCAGCCATAGAAAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487217 43 + 3802414 tatctattatattGGTGATCACAATTTTGGCAGCCATAGAAAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9844815 43 + 11631747 tacctattatatTGGTGATCACAATTTTGGCAGCCATAGAAAA i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I a score=28846.000000 s hg38.chr9_KI270719v1_random 145727 321 + 176845 ACTTCAGggccgggcgcggtagctcacgcctgtaatcccagtactttgggaggccgaggcgagcgggtcacgaggtcaggagatcgagaccatcctggcaaacacggtgaaaccccctctctactaaaaatacagaaaattagccaggtgtagtggcgggcgcctgtagtcccagctactcgggaggccgaggcaggagaatggcgtgaacctgggaggcagagcttgcagtgagccgagattgcgccaccgcaatccagcctgggcgacagagcgagactctgtctcaaaaaaaaacaaaaaacaaaaaac-aaaaaaAAC s gorGor5.CYUI01008057v1 2170 320 + 15539 ACTTCAGggccgggcgcggtggctcacgcctgtaatcccagtactttgggaggccgaggcgagcgggtcacgaggtcaggagatcgagaccatcctggcaaacacggtgaaaccccctctctactaaaaatacagaaaattagccaggtgtagtggcgggcgcctgtagtcccagctactcgggaggcctaggcaggagaatggcgttaacctgggaggcagagcttgcagtgagccgagattgcgccactgcaatccagcctgggcgacagagcgagactctgtctc--aaaaaaacaaaaaacaaaaaacaaaaaaaaaa i gorGor5.CYUI01008057v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e panPan2.chr4 87857002 0 + 195804263 C e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I e aotNan1.NW_018493494v1 9844858 0 + 11631747 C e cebCap1.NW_016107603v1 487260 0 + 3802414 C e saiBol1.JH378162 14654502 0 + 15139346 C e calJac3.chr3 145768682 0 + 190850796 C e colAng1.NW_012120821v1 4314141 0 + 12320365 C e manLeu1.NW_012101853v1 41078 0 + 294823 C e chlSab2.chr27 5267552 0 + 48547382 C e cerAty1.NW_012002843v1 1266659 0 + 25348628 C e macNem1.NW_012011022v1 3647366 0 + 39453387 C e macFas5.chr5 144532629 0 - 189454096 C e rheMac8.chr5 145505242 0 - 190429646 C e nomLeu3.chr20 42639686 0 + 85365473 C e panTro5.chr4 87080845 0 + 194502333 C a score=2641364.000000 s hg38.chr9_KI270719v1_random 146048 271 + 176845 ACTTCAGAGCATAAGCCAAAACAATTAGAAATAGCATGGCTTTAAATTAATTTTTCAAGGATCTTAAGGTGACAAATATTCTGTCATCTGTC---ATGCAAATCTAGTTCCACAGAAGGGCAAATTAGGAATCCATTACCTGGAATAACCATTCCTCATGCCTAGAAGAAGAATCTCTACAAGCAGGATTCTTGCT-TTCAAC-ATGCCCTTATAAATTGGAGTCAGACTGAATCA-TTTTTTCTTGGCAATGGACAAG-AAAATCAGACTGTAACTA s panTro5.chr4 87080845 273 + 194502333 ACTTCAAAGCATAAGCCAGAACAATTAGAAATAGCATGGCTTTAAATTAATTTTTAAAAAATCTTAAGGTGACAAATATTCTGTCATCTGTC---AAGCAAAGCTCATTCCACAGAAGGGCAAATTAGGAATCCATTACCTGGAATAGCCATTTCTCATGCCTAGAAAAAGAATATCTACAAATAGGATTCTTGCTCTTCAACCATGCCCTTATAAAACGGGGCCAGACTGAATCA-TTTTTTCTTGGCAATGGATGAG-AAAATCAGACTGTAGCTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857002 273 + 195804263 ACTTCAAAGCATAAGCCAGAACAATTAGAAATAGCATGGCTTTAAATTAATTTTTAAAAAATCTTAAGGTGACAAATATTCTGTCATCTGTC---AAGCAAAGCTCATTCCACAGAAGGGCAAATTAGGAATCCATTACCTGGAATAGCCATTTCTCATGCCTAGAAAAAGAATATCTACAAATAGGATTCTTGCTCTTCAACCATGCCCTTATAAAACGGGGCCAGACTGAATCA-TTTTTTCTTGGCAATGGATGAG-AAAATCAGACTGTAGCTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 2490 272 + 15539 acTTCAGAGCATAAGCCAAAACAATTAGAAATAGCATGGCTTTAAATTAATTTTTTAAGAATCTTAAGGTGACAAATATTCTGTCATCTGTC---ATGCAAATCTAGTTCCACAGAAGGGCAAATTAGGAATCCATTACCTGGAATAACCATTCCTCATGCCTAGAAGAAGAATCTCTACAAGTAGGATTCTTGCTGTTCAAC-ATGCCCTTATAAATTGGAGTCAGACTGAATCA-TTTTTTCTTGGCAATGGACAAG-AAAATCAGACTGTAACTG i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42639686 272 + 85365473 ACTTCAGAACAAAAGCCAAAACAATCAGAAATAGCATGGCTTTAAATTAATTTTTTAAAAATCTCAAAGTGACAAATATTCTGTCATCTGTC---ATACAAACCTCATTCCACAGAAGGGCAAATTAGGAATCCATTACCTGGAATAGCCATTCCTCACGCCTAGAAAAATAATCTCTACAAATAGGATTCTTGTTCTTCAAC-ATGCCCTTATAAAATGGGGCCAGACTGAATCA-TTTTTTCTTGGCAATGGACGAG-AAAATCAGACTGTAGCTA i nomLeu3.chr20 C 0 I 1 s rheMac8.chr5 145505242 270 - 190429646 ACTTCAAAGCATAAGCCAAAATAATTAGAAATAGCATGGATTTAAATTAATTTTTTAAAAGTCTTAAGGTGAGAAATATTCTGTCATCTGTC---ATGCAAAGCTCATTCCACAGAAGGGCAAATTAGGAATCCATTACCTGGAATAGTCATTCCACACGCCTAGAAAAAGAATCTCTACAAATAGGATTCTTGCTCTTCAAT-GTGCCCTTAT--AATGGGATCAGACTGAATCA-TTTTTTCTTGGCAATGGACGAG-AAAATCAGACTGCAGCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144532629 272 - 189454096 ACTTCAAAGCATAAGCCAAAATAATTAGAAATAGCATGGATTTAAATTAATTTTTTAAAAGTCTTAAGGTGACAAATATTCTGTCATCTGTC---ATGCAAAGCTCGTTCCACAGAAGGGCACATTAGGAATCCATTACCTGGAATAGTCATTCCACACGCCTAGAAAAAGAATCTCTACAAATAGGATTCTAGCTCTTCAAT-GTGCCCTTATAAAATGGGGTCAGACTGAATCA-TTTTTTCTTGGCAATGGACGAG-AAAATCAGACTGCAGCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647366 272 + 39453387 ACTTCAAAGCATAAGCCAAAATAATTAGAAATAGCATGGATTTAAATTAATTTTTTAAAAGTCTTAAGGTGAGAAATATTCTGTCATCTGTC---ATGCAAAGCTCATTCCACAGAAGGGCAAATTAGGAATCCATTACCTGGAATAGTCATTCCACACGCCTAGAAAAAGAATCTCTACAAATAGGATTCTTGCTCTTCAAT-GTGCCCTTATAAAATGGGATCAGACTGAATCA-TTTTTTCTTGGCAATGGACGAG-AAAATCAGACTGCAGCTA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1266659 273 + 25348628 ACTTCAAAGCATAAGCCAAAATAATTAGAAATAGCATGGATTTAAATTAATTTTTTAAAAGTCTTAAGGTGACAAATATTCTGTCATCTGTC---ATGCAAAGCTCGTTCCACAGAAGGGCAAATTAGGAATCCATTACCTGGAATAGTCATTCCACACGCCTAGAAAAAGAATCTCTACAAATAGGATTCTAGCTCTTCAAT-GTGCCCTTATAAAATGGGGTCAGACTGAATCATTTTTTTCTTGGCAATGGACGAG-AAAATCAGACTGCAGCTA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5267552 272 + 48547382 ACTTCAAAGCATAAGCCAAAATAATTAGAAATAGCATGGATTTAAATTAATTTTTTAAAAGTCTTAAGGTGACAAATATTCTGTCATCTGTC---ATGCAAAGCTCGTTCCACAGAAGGGCAAATTAGGAATCCATTACCTGGAATAGTCATTCCACACGCCTAGAAAAAGAATCTCTACAAATAGGATTCTTGCTCTTCAAT-GTGCCCTTATAAAATGGGGTCAGACTGAATCA-TTTTTTCTTGGCAATGGACGAG-AAAATCAGACTGCAGCTA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 41078 273 + 294823 ACTTCAAAGCATAAGCCAAAATAATTAGAAATAGCATGGATTTAAATTAATTTTTTAAAAGTCTTAAGGTGACAAATATTCTGTCATCTGTC---ATGCAAAGCTCGTTCCACAGAAGGGCAAATTAGGAATCCATCACCTGGAATAGTCATTCCACACGCCTAGAAAAAGAATCTCTACAAATAGGATTCTAGCTCTTCAAT-GTGCCCTTATAAAATGGGGTCAGACTGAATCATTTTTTTCTTGGCAATGGACGAG-AAAATCAGACTGCAGCTA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4314141 272 + 12320365 ACTTCAAAGCATAAGCCAAAACAATTAGAAATAGCATGGATTTAAATTAATTTTTTAAAAGTCTTAAGATGACAAATATTCTGTCATCTGTC---ATGCAAAGCTCATTCCACAGAAGGGCAAATTAGGAATCCATCACCTGGAATAGTCATTCCACATGCCTAGAAAAAGAATCTCTACAAATAGGATTCTTGGTCTTCAAT-GTGCCCTTATAAAATGGGGTCAGACTAAATCA-TTTTTTCTTGGCAATGGACGAG-AAAATCAGAGTGCAGCTA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145768682 276 + 190850796 ACTTCAAAGCATAAACCAAAACAATTAGAAATAGCATGGCCTTAAATTGATTTTTTTTAAATCTTAAGGTGACAAATATTCTGTCATCTGTCATGATGCAAAGCTGGTTCCACAGAAGGACAAATTAGGAATCCATTACCTGGAATAGCCATTCCTCATGCCTAGAAAAAGAATCTCTACAAGTAGGATTCTAGCTGTTCAAC-GTGTCCTTATAAAATGGGGCCAGACTGAATCA-TTTTTTCTTGGCAATAGACAAGAAAAATCAGACTGTAGCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654502 275 + 15139346 ACTTCAAAGCATAAACCAAAACAATTAGAAATAGCATGGCCTTAAATTGATTTTTTAAAAATCTTAAGGTGACAAATATTCTGTCATCTGTCACGATGCAAAGCTGGTTCCACAGAAGGGCAAATTAAAAATCAATTACCTGGAATAGCCATTCCTCGAGCCTAGAAAAAGAATCTCTACAAGTAGGACTCTAGCTGTTCAAT-GTGCCCTTATAAAATGGGGCCAAACTGAATCA-TTTTTTCTTGGCAATAGACAAG-AAAATCAGACTGTAGCTA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487260 275 + 3802414 ACTTCAAAGCATAAACCAAAACAATTAGAAATAGCATGGCCTTAAATTGATTTTTTAAAAATCTTAAGGTGACAAATATTCTGTCATCTGTCATGATGCAAAGCTGGTTCCACAGAAGGACAAATTAGGAATCCATTACCTGGAATAGCCATTCGTCATGCCTAGAAAAAGAATCTCTACAAGTAGGACTCTAGCTGTTCAAT-GTGCCCTTATAAAATGCAGGCAGACTGAATCA-TTTTTTCTTGGCAATAGACAAG-GAAATCAGACTGTAGCTA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9844858 275 + 11631747 ACTTCAAAGCGTAAACCAAAACAATTAGAAATAGCAAGGCCTTAAATTGATTTTTTAAAAATCTTAAGGTGACAAATATTCTGCCATTTGTCATGATGCAAAGCTGGTTCCACAGAAGGGCAAATTAGGAATATATTACCTGGAATAGCCATTCCTCACGCCTAGAAAAAAAGTCTCTACAAGTAGAATTCTAGCTGTTCAAT-GTGCCCTTATAAAATGGGGCCAGATTGAACCA-TTTTTTCTTCGCAATAGACAAG-AAAATCAGACTGTAGCTA i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I a score=1184627.000000 s hg38.chr9_KI270719v1_random 146319 137 + 176845 C--CTTTGTCACTGAGAATTGGTCAACCATTTCAAAATAGGTAAGTTTTCTCCCCCTGATGTTTCTACtggggcttgaaggattgataaatatgcttatattctctgtcagaattttgaactaagggagagataagcaa s panTro5.chr4 87081118 135 + 194502333 CAGCTTTGTCACAGACAATTGGTCAACCATTTCAAAATAGGTAGGTTTTCTCCCTCCAATGCTTCTACtggggcttgaaggattgataaatatgcttctattccctgtcagagctttgaactaagtgagag----gcaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857275 135 + 195804263 TAGCTTTGTCACAGAGAATTGGTCAACCATTTCAAAATAGGTAGGTTTTCTCCCTCCGATGCTTCTACtggggcttgaaggattgataaatatgcttctattccctgtcagagctttgaactaagtgagag----gcaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 2762 139 + 15539 TAGCTTTGTCACTGAGAATTGGTCAACCATTTCAAAATAGGTAAGTTTTCTCCCTCTGATGTTTCTACtggggcttgaaggattgataaatatgcttctattctctgtcagaattttgaactaagggagagatacgcaa i gorGor5.CYUI01008057v1 C 0 C 0 s rheMac8.chr5 145505512 139 - 190429646 TAGCTTTGTCACTGAGAATTGGTCAACCATTTCAAAATAGGTAGGTTTTCTCCCTCCAAGGCTTCTACtggggcttgaaggattgacaaatatgcttctgttccctgtcagagcttcgaactaagtgagagataggcaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144532901 139 - 189454096 TAGCTTTGTCACTGAGGATTGGTCAACCATTTCAAAATAGGTAGGTTTTCTCCCTCCAAGGCTTCTACtggggcttgaaggattgacaaatatgcttctgttccctgtcagagcttcgaactaagtgagagataggcaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647638 139 + 39453387 TAGCTTTGTCACTGAGAATTGGTCAATCATTTCAAAATAGGTAGGTTTTCTCCCTCCAAGGCTTCTACtggggcttgaaggattgacaaatatgcttctgttccctgtcagagcttcgaactaagtgagagataggcaa i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1266932 139 + 25348628 TAGCTTTGTCACTGAGAATTGGTCAACCATTTCAAAATAGGTAGGTTTTCTCCCTCCAAGGCTTCTACtggggcttgaaggattgacaaatatgcttctgttccctgtcagagcttcgaactaagtgagagataggcaa i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5267824 139 + 48547382 TAGCTTTGTCACTGAGAATTGGTCAACCATTTCAAAATAGGTAGGTTTTCTCCCTCCAAGGCTTCTACtgggacttgcaggattgacaaatatgcttctgttccctatcagagctttgaactaagtgagagataggcaa i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 41351 139 + 294823 TAGCTTTGTCACTGAGAATTGGTCAACCATTTCAAAATAGGTAGGTTTTCTCCCTCCAAGGCTTCTACtggggcttgaaggattgacaaatatgcttctgttccctgtcagagcttcgaactaagtgagagataggcaa i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4314413 139 + 12320365 TAGCTTTGTCACTGAGAATTGGTCAACCATTTCAAAATAGGTAGGTTTTCTCCCTCCAAGGCTTCTACtggggcttgaaggattgacaaatatgcttctgttccctgtcagagctttgaactaagtgggagataggcaa i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145768958 139 + 190850796 TAGCTTTGTCACTGGAAATTGGTCAACCATTTCAAAATAGGTAGATTTTCTCTCTTCTGTGCTTCTACtggggcttgaaggattgataaatatgtttctatttcctgtcaaagttttgaactaagtgagaaataggcaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654777 139 + 15139346 TAGCTTTGTCACTGGGAATTGGTCAACCATTTCAAAATAGGTAGATTTTCTGTCTCCTGTGCTTCTACtggggcttgaaggattgataaatatgcttctatttcctgtcaaagttttgaactaagtgagaaataggcaa i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487535 139 + 3802414 TAGCTTTGTCACTGGGAATTGGTCAACCATTTCAAAATAGGTAGATTTTCTCTCTCCTGTGCTTCAACtggggcttgaaggattgataaatatgcttctatttcctgtcaaaattttgaactaagtgtgaaataggcaa i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9845133 139 + 11631747 TAGCTTTGTCACTGGGAATTGGTCAACCATTTCAAAATAGGTAGACTTTCTCTCTCCTGTGCTTCTACtggggcttgaaggattgataaatacgcttctatttcctgtcaaagttttgaactaagtgagaaataggcaa i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e canFam3.chr13 21712602 75549 - 63241923 I e nomLeu3.chr20 42639958 1 + 85365473 I a score=233488.000000 s hg38.chr9_KI270719v1_random 146456 22 + 176845 agattcaggcagatggagatca s panTro5.chr4 87081253 22 + 194502333 agattcaggcaaatggagatca i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857410 22 + 195804263 agattcaggcaaatggagatca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 2901 22 + 15539 agattcaggcagatggagatca i gorGor5.CYUI01008057v1 C 0 C 0 s rheMac8.chr5 145505651 22 - 190429646 agattcaggcagatggagatca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144533040 22 - 189454096 agattcaggcagatggagatca i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647777 22 + 39453387 agattcaggcagatggagatca i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267071 22 + 25348628 agattcaggcagatggagatca i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5267963 22 + 48547382 agattcaggcagatggagatca i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 41490 22 + 294823 ggattcaggcagatggagatca i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4314552 22 + 12320365 agaatcaggcagatggagatca i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145769097 22 + 190850796 agattaaggcagatggagatca i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654916 22 + 15139346 agattcaggcagatggagatca i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487674 22 + 3802414 agattcaggcagatggagatca i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9845272 22 + 11631747 agattcaggcagatggagatca i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21788151 22 - 63241923 AGATCcaggcagacagagatca i canFam3.chr13 I 75549 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 700188 96774 + 1045278 I e nomLeu3.chr20 42639958 1 + 85365473 I a score=12376.000000 s hg38.chr9_KI270719v1_random 146478 1 + 176845 a s panTro5.chr4 87081275 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857432 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 2923 1 + 15539 a i gorGor5.CYUI01008057v1 C 0 C 0 s rheMac8.chr5 145505673 1 - 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 144533062 1 - 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647799 1 + 39453387 a i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267093 1 + 25348628 a i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5267985 1 + 48547382 a i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 41512 1 + 294823 a i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4314574 1 + 12320365 a i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145769119 1 + 190850796 a i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654938 1 + 15139346 a i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487696 1 + 3802414 a i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9845294 1 + 11631747 a i aotNan1.NW_018493494v1 C 0 C 0 s tarSyr2.KE948818v1 796962 1 + 1045278 a i tarSyr2.KE948818v1 I 96774 I 5757 s canFam3.chr13 21788173 1 - 63241923 a i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e nomLeu3.chr20 42639958 1 + 85365473 I a score=1184946.000000 s hg38.chr9_KI270719v1_random 146479 150 + 176845 gatggcaggttt-atttttaaaggagctatggggaatctttgtggtaacaatagattttttctgttactgTGGACACACATACCTTCCCAGCCACAAGTGGTGCTAGACAACTGCACACCT-CTCCATCCCA-CCTCCCATCCCAACAGATAC s panTro5.chr4 87081276 148 + 194502333 ggtgacagcttt--tttttaaaagagctatggggaatctttgcagtaacagtggattttt-ctattactgTAAACACACATACCTTCCCAGCCACAAGTAGTGCTAGACAACTGCACGCCT-CCCCATTCCA-CCTCCCATCCCAACAGATGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857433 148 + 195804263 ggtgacagcttt--tttttaaaagagctatgggtaatctttgcagtaacagtggattttt-ctattactgTAAACACACATACCTTCCCAGCCACAAGTACTGCTAGACAACTGCACGCCT-CCCCATTCCA-CCTCCCATCCCAACAGATGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 2924 150 + 15539 gatggcaggttt-atttttaaaggagctatggggaatctttgtggtaacaatagattttttctgttactgTAGACACACATACCTTCCCAGCCACAAGTGGTGCTAGACAACTGCACACCT-CTCCATCCCA-CCTCCCATCCCAACAGATAC i gorGor5.CYUI01008057v1 C 0 C 0 s rheMac8.chr5 145505674 148 - 190429646 ggagacagcttt-atttttaaaagagctatgaggcatctctgcagtaacaatggattttt-ctattactgtaaacacacataccttcccagtcacaagtagtgctagacaactgcatgcct-ccccATTCCA--CTCCCATCCCAACAGATGT i rheMac8.chr5 C 0 N 0 s macFas5.chr5 144533063 148 - 189454096 ggagacagcttt-atttttaaaagagctatgaggcatctctgcagtaacaatggattttt-ctattactgtaaacacacataccttcccagtcacaagtagtgctagacaactgcatgcct-ccccATTCCA--CTCCCATCCCAACAGATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647800 148 + 39453387 ggagacagcttt-atttttaaaagagctatgaggcatctttgcagtaacaatggattttt-ctattactgtaaacacacataccttcccagtcacaagtagtgctagacaactgcatgcct-ccccATTCCA--CTCCCATCCCAACAGATGT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267094 148 + 25348628 ggagacagcttt-atttttaaaagagctatgaggcatctttgcagtaacaatggattttt-ctattactgtaaacacacataccttcccagtcacaagtagtgctagacaactgcatgcct-ccccATCCCA--CTCCCATCCCAACAGATGT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5267986 148 + 48547382 ggagacagcttt-atttttaaaagagctatgaggcatctttgcagtaacaatggattttt-ctattactgtaaacacgcataccttcccagtcacaagtagagccagacaactgcatgcct-ccccATTCCA--CTCCCATCCCAACAGATGT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 41513 148 + 294823 ggagacagcttt-atttttaaaagagctatgaggcatctttgcagtaacaatggattttt-ctattactgtaaacacacataccttcccagtcacaagtagtgctagacaactgcatgcct-ccccATCCCA--CTCCCATCCCAACAGATGT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4314575 148 + 12320365 ggagacagcttt-attttcaaaagagctatgaggcatctttgcagtaacaatggattttt-ctattaccataaacacacataccttcccagtcacaagtagtgctagacaactgcatgcct-ctccATTCCA--CTTCCATCCCAACAGATGT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145769120 133 + 190850796 gaagacagcttt-atatttaaaagagctaggggaaatctttgcagtaac----aatTTTT-CTATTACTATAGACAAATATACCTTCCCAGCCATAAGTAGTGCTAGACAACTGTACATCT-CCCCATCCCA-------------GCAGATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14654939 136 + 15139346 gaagacagcttt-atgtttgaaagagctatgggaaatctttgcagtaacaacgaattttt-ctattactgTAGACAAATATACCTTCCCAGCCATAGGTAG-GCTAGACAACTGCACATCT-CCCCATCCCA-------------ACAGATGT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487697 136 + 3802414 gaagacagcttt-atatttaaaagagctatgggaaatctttgcagtaacaataaattttt-ctattactATAGACAAATAGACCTTCCCAGCCGTAAGTAG-GCTAGACAATTGCACATTT-GCCCATCCCA-------------ACAGATGT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9845295 137 + 11631747 gaagacagcttt-atatttaaaagagctatgggaaatctttgcagtaacaatgaattttt-ctatttctgtagacaaatataccttcccagccataagtagtgctggacaactgcacatct-ccccATCCCA-------------ACAGATGT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21788174 150 - 63241923 aatggcagttttcactttaaaaagagctattgaagatctttgcagtaacaatggatttc--ctattactgaagacaaacttatcttcccggccgcaagt-gccctagaAATCTACCCATCTGTCCTACTCCATCTTCCTGTCCCCACCAATGG i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e nomLeu3.chr20 42639958 1 + 85365473 I a score=1396728.000000 s hg38.chr9_KI270719v1_random 146629 166 + 176845 ATAGGCATTTTCTTCAGATGTTGATGAAAATAATTA-TTTTATCACTACATC--CAGATAATTCCAACAAGCAATATGC-TTGTTGAGGTGAAATAATTTTTCTAAGATACAAACAGAAAATATATACGATTGAAATAGACACTAGGTGATATTTCACATACACAATATG s panTro5.chr4 87081424 166 + 194502333 ATAGGCATTTTCTTTAGATGTTGATGAAAATAATCA-TTTTATCACTATATC--CAGATACTTCCAGATAGTAATACGC-TTGTTGAGGTGAAAGAATCTTTCTAAGATACAAACAGAAAATACATGTGATTGAAATAGATACTAGGTGATATTTCACATATGCAATATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857581 166 + 195804263 ATAGGCATTTTCTTTAGATGTTGATGAAAATAATCA-TTTTATCACTATATC--CAGATACTTCCAGATAGTAATACGC-TTGTTGAGGTGAAAGAATCTTTCTAAGATACAAACAGAAAATACATGTGATTGAAATAGATACTAGGTGATATTTCACATATGCAATATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3074 166 + 15539 ATAGGCATTTTCTTCAGATGTTGATGAAAATAATTA-TTTTATCACTATATC--CAGATAATTCCAACAAGCAATATGC-TTGTTGAGGTGAAATAATTTTTCTAAGATACAAACAGAAAATATATACGATTGAAATAGACACTAGGTGATATTTCACATATGCAATATG i gorGor5.CYUI01008057v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50019 161 + 80219 ATAGGCATTTTCTTTAGATGTTTATGAAAATAA------TCATCACTATATC--CAGATAATTCCAGATAGCCATATGC-TTGTTGAGGTGAAAGAATCTTTCTAAGATACAGACAGAAAGTATATGTGATTGAAATAGACACTGGATGGTATTTCACATACGCAATATG i rheMac8.chrUn_NW_014841389v1 N 0 C 0 s macFas5.chr5 144533211 162 - 189454096 ATAGGCATTATCTTTAGATACTGATGAAAATAATTA-TTTTATCACTATATC--CAGATACTTCCAGATAGTAATATGC-TTGTTGAGATGAAAGAA----TCTAAGATACAAACAGAAAAAATATGTGATTGAAATAGATACTAGGTGATATTTCACATATGCAATATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3647948 162 + 39453387 GTAGGCATTATCTTTAGATACTGATGAAAATAATTA-TTTTATCACTATATC--CAGATACTTCCAGATAGTAATATGC-TTGTTGAGATGAAAGAA----TCTAAGATACAAACAGAAAAAATATGTGATTGAAATAGATACTAGGTGATATTTCACATATGCAATATG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267242 162 + 25348628 ATAGGCATTATCTTTAGATACTGATGAAAATAATTA-TTTTATCACTATATC--CAGATACTTCCAGATAGTAATATGC-TTGTTGAGATGAAAGAA----TCTAAGATACAAACAGAAAAAATATGTGATTGAAATAGATACTAGGTGATATTTCACATATGCAATATG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268134 162 + 48547382 ATAGGCATTATCTTTAGAGACTGATTAAAATAATTA-TTATATCGCTATATC--CAGATACTTCCAGATAGCAATATGC-TTGTTGAGATGAAAGAA----TCTAAGATACAAACAGAAAAAATATGTGATCGAAATAGATCCTAGGTGACATTTCACATATGCAATATG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 41661 163 + 294823 ATAGGCATTATCTTTAGATACTGATGAAAATAATTATTTTTATCACTATATT--CAGATACTTCCAGATAGTAATATGC-TTGTTGAGATGAAAGAA----TCTAAGATACAAACAGAAAAAATATGTGATTGAAATAGATACTAGGTGATATTTCACATATGCAATATG i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4314723 160 + 12320365 ATAGGCATTTTCTTTAAACGCTGATGAAAATAATTA-TTTTATCACTATATC--CAGATACTTCCAGATAGTAATATAT-TTACTGAGGTGAAAGAA----TCTAAGATACAAACAGAAAAA--ATGTGATTGAAATAGATATTAGGTGATATTTCACATAAGCAATATG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145769253 166 + 190850796 ATAGGCATTTTCTTTTGATGTTGATGAAAATAATTA-TTTTATCACTATATC--CAGATAATTCCAGATACCAATATGC-TTTTTGAGGTAAAAGAATATTTCTAAGACACAAACAGAAAATATATGTCATTGAAATAAATACTAGGTGATATTTCACATATGCTATATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14655075 166 + 15139346 ATAGGCATTTTCTTTTGATGTTGATGAAAATAATTA-TTTTATCACTATATC--CAGATAATTCCAGATAGCAATATGC-TTTTTGAGGTATAAGAATATTTCTAAGATACAAACAGAAAACATATGTCATTGAAATAGATACTAGGTGAAATTTCATATATGCAATATG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487833 166 + 3802414 ATAGGCATTTTCTTTTGACGTTGATGGAAATAATTA-TTTTATCACTATATC--CAGATAATTCCAGATAGCGATGTGC-TTTTTGAGGTAGAATAATATTTCTAAGATACAAACAGAAAATATGTGTTATTGAAATAGATACTAGGTGATATTTCACATATGCGATATG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9845432 167 + 11631747 ATAGGCATTTTCTTTTGATGTTGATGAAAATAATTA-TTTTATCACTATATC--CAGATAATTCCAGATAGCAATATGCTTTTTTAAGGTAGAAGAATATTTCTAAGATACAAACAGAAAATATATGTCATTGAAATAGATACTAGGTGATATTTCACATATGCAATATG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21788324 168 - 63241923 ACGGGATGTTTCTTAAAATGTTGATGGAAAGAATTA-TTATATGACTACATCTGCAAATAATTCCTGACAGTACGATGC-TTTCTGGGGTGAATCTATCCTTCTAAGACCAAAGCAGAAAATATATGTGATCAAAGCAGGTAGTAGGTGACACTTAATGCATGCAACGTA i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e nomLeu3.chr20 42639958 1 + 85365473 I a score=787063.000000 s hg38.chr9_KI270719v1_random 146795 84 + 176845 AGCTCTGTTTCTTTGACAAGAC----AGA-----TGCATGAAGAATTCATGTTT-GAATGATTGGCATTAGTCTAAAGTATTAAATAATGAAAT s panTro5.chr4 87081590 81 + 194502333 AGCTCTGCTTCTTTGACAAGAC----AGA-----TGAATGAAGAGTTCATGTTG-GAATGATTGGCATTAGTCCAAATTATTAAAT---GAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857747 81 + 195804263 AGCTCTGCTTCTTTGACAAGAC----AGA-----TGAATGAAGAGTTCATGTTG-GAATGATTGGCATTAGTCCAAATTATTAAAT---GAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3240 84 + 15539 AGCTCTGTTTCTTTGACAAGAC----AGA-----TGAATGAAGAATTCATGTTT-GAATGATTGGCATTAGTCTAAAGTATTAAATAATGAAAT i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42639959 84 + 85365473 AGCTCTACTTCTTTGACAAGAC----AGA-----TGAATGAAGAGTTCATGTTT-GAATGATTGGCATTAGTCCAAATTATTAAATAATGAAAG i nomLeu3.chr20 I 1 C 0 s rheMac8.chrUn_NW_014841389v1 50180 84 + 80219 AGCTCTGATTCTTTGACAGGAC----AGG-----TGAATGAAGGATTCATGTTT-GAATGATTGGCATTAGTCCAAAGCATTAAATAATTAAAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144533373 84 - 189454096 AGCTCTGCTTCTTTGACAAGAC----AGA-----TGAATGAAGGGTTCATGTTT-GAATGACTGGCATTAGTCCAAATTATTAAATAATGAAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648110 88 + 39453387 AGCTCTGCTTCTTTGACAAGACAGATAGA-----TGAATGAAGGGTTCATGTTT-GAATGATTGGCATTAGTCCAAATTATTAAATAATGAAAG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267404 84 + 25348628 AGCTCTGCTTCTTTGACAAGAC----AGA-----TGAATGAAGGGTTCATGTTT-GAATGATTGGCATTAGTCCAAATTATTAAATAATGAAAG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268296 84 + 48547382 AGCTCTGCTTCTTTGACAAGAC----AGA-----TGAATGAAGGGTTCATGTTT-GAATGATTGGCATTAGTCCAAATTATTAAATAATGAAAG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 41824 84 + 294823 AGCTCTGCTTCTTTGACAAGAC----AGA-----TGAATGAAGGGTTCATGTTT-GAATGATTGGCATTAGTCCAAATTATTAAATAATGAAAG i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4314883 84 + 12320365 AGCTCTGCTTCTTTGACAAGAC----AGA-----TGAAAGAAGGGTTCATGTTT-GAATGATTGGCATTAGTCCAAATTATTAAATAATGAAAT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145769419 79 + 190850796 AATTCTGCTTCTTTTACAAGAC----AGA-----TAAATGGAGGGTTCATGGTT-GAATGATTGGCATT-----AAAGTATTAAATAATGAAAT i calJac3.chr3 C 0 I 9 s saiBol1.JH378162 14655241 79 + 15139346 AATTCTGCTTCTTTGACAAGAC----AGA-----TAAATGAAGGGTTCATGTTT-GAATGATTGGCATT-----AAAGTATTAAATAATGAAAG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 487999 78 + 3802414 AATTCTGCAT-TTTGACAAGAT----AGA-----TAAATGAAGGGTTCATGTTT-GAATGATCGGCATT-----AAAGTATTAAATAATGAATA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9845599 79 + 11631747 AATTCTGCTTCTTTGACAAGAC----AGA-----TAAATAAAGGGTTCATGTTT-GAATGATTGGCATT-----AAAGTATTAAATAATGAAAG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21788492 90 - 63241923 ATTCCTGCTTCTTCCACAAGCC----AGATGCAGTGCACAAAAGGTCCACATTCAGAGTGACTGACTTTTGTCAGAAGTACTAAATAATGAGTT i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I a score=1131914.000000 s hg38.chr9_KI270719v1_random 146879 135 + 176845 TGTCCATATTCTCTGCCCAGTATGATCTTTTAAAATATCATCCACACAAATACAAGTGAGGTCATATTTTTTACAATGAGGCATCAAATTTAAAGGCAGCAAAAA---------AATA-------ATGAATATACCTCTTAGGCTAATTGT s panTro5.chr4 87081671 135 + 194502333 TGTCCATATTCTCTGCCCAGTATGATCTTTTAAAATATCACCCACACAAATACATGTGAGGTCATATTTTTCACAATGAGGCATCAAATTTAAAGACGGCAAAAA---------AATA-------ACGAATATACCTCTTAAGCTAACTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857828 135 + 195804263 TGTCCATATTCTCTGCCCAGTATGATCTTTTAAAATATCACCCACACAAATACATGTGAGGTCATATTTTTCACAATGAGGCATCAAATTTAAAGACGGCAAAAA---------AATA-------ACGAATATACCTCTTAGGCTAACTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3324 135 + 15539 TGTCCATATTCTCTGCCCAGTGTGATCTTTTAAAATATCATCCACACAAATACAAGTGAGGTCATATTTTTTACAATGAGGCATCAAATTTAAAGGCAGCAAAAA---------AATA-------ATGAATATATCTCTTAGGCTAATTGT i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42640043 140 + 85365473 TGTCCATATTCTCTGCCCAGTATGATCTTTTAAAATATCACCCAAACAAATACAAATGAGGTCATATTTTTCACAATGAGGCCGCAAATTTAAAGACAGCAAAAAAAAAAAAATAATA-------ATGAATATACCTCTTAGGC----TGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50264 141 + 80219 TGTCCATATTCTCTGCCCAGTAGGATCTTTTAAAATATCATCCACACAAATACAAGTGAGGACATATTTTTTACAATGAGATGTCAAATTTAAAGACAGCAAAAA---------AAAA-AAAATAATGAATATACCTCTTAGGCTAATTGT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144533457 136 - 189454096 TGTCCATATTCTCTGTCCAATATGATCTTTTAAAATATCAGCCACACAAATACAAGTGAGGTCATATTTTTCACAATGAGGCATCAAATTTAGAGACAGCAAAAA---------AAAA------AAAGAATATATGTCTTAGGTTAACTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648198 139 + 39453387 TGTCCATATTCTCTGTCCAATATGATCTTTTAAAATATCAGCCACACAAATACAAGTGAGGTCATATTTTTCGCAATGAGGCATCAAATTTAGAGACAGCAAAAA---------AAAA---AATAATGAATATATGTCTTAGGTTAACTGT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267488 142 + 25348628 TGTCCATATTCTCTGTCCAATATGATCTTTTAAAATATCAGCCACACAAATACAAGTGAGGTCATATTTTTCACAATGAGGCATCAAATTTAGAGACAGCaaaaa---------aaaaaaaaaaaaTGAATATATGTCTTAGGTTAACTGT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268380 138 + 48547382 TGTCCATATTCTCTGTCCAATATGATCTTTTAAAATATCAGCCACACAAATACAAGTGAGGTCATATTTTTCACAATGAGGCATCAAATTTAGAGACAGC--AAA---------AAAA--AAATAACGAATATACGTCTTAGGTTAACTGT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 41908 140 + 294823 TGTCCATATTCTCTGTCCAATATGATCTTTTAAAATATCAGCCACACAAATACAAGTGAGGTCATATTTTTCACAATGAGGCATCAAATTTAGAGACAGCAAAAA---------AAAA--AAAAAATGAATATATGTCTTAGGTTAACTGT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4314967 135 + 12320365 TGTCCATATTCTCTGTCCAATATGATCTTTTAAAATATCAGCCACACAAATACAAGTGAGGTCATATTTTTCACAATGAGGCATCAAATTTAGAGACAGCAAAAA---------AATA-------ACAAATATATGTCTTACGTTAACTGT i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14655320 135 + 15139346 CGTACATAATCTCTGACCAGTATGATCTTTTAAAATATCACCCATACAAATACAAGTGAAGTCATATTTTTTACAAGGAGGCATCAAATTCAAAGACAGCCGAAA---------CATA-------ATGAATATATCTCTTAGGCTAATTGT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 488077 135 + 3802414 TGTCCATATTCTCTGACCAGTATGATCTTTTAAAATATCACCCACACAAATACAAGTGAAGTCATATTTTTTACAATGAGGCATCAAATTCAAAGACAGCCAAAA---------CATA-------ATGAATATACCTCTTAGGCTAATTGT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9845678 133 + 11631747 TGTCCATATTCTCTGACCAGTATGATCTTTTAAAATATCACCCACACAAATACAAGTGAAGTCATATTTTTTACAATGAGGCATCAAATTC--AGACAGCCAAAA---------CACA-------ATGAATATACCACTTAGGCTAATTGT i aotNan1.NW_018493494v1 C 0 I 4217 s canFam3.chr13 21788582 121 - 63241923 --TTTACATTCTCAGGCCAGTGTGATGTTTTTCAAAATCACTCACACAAACGTAAGCGAGCTCAGGCTTCTTGCAGTGAAGCATCAAATTCAAGGCTAGCAAAAA------------------------ATGTCCTTCTTACACTGA---- i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e calJac3.chr3 145769498 9 + 190850796 I a score=35322.000000 s hg38.chr9_KI270719v1_random 147014 5 + 176845 TTACC s panTro5.chr4 87081806 5 + 194502333 TTACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857963 5 + 195804263 TTACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3459 5 + 15539 TTACC i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42640183 5 + 85365473 TTACC i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50405 5 + 80219 TTACC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144533593 5 - 189454096 TTACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648337 5 + 39453387 TTACC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267630 5 + 25348628 TTACC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268518 5 + 48547382 TTACC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 42048 5 + 294823 TTACC i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4315102 5 + 12320365 TTACC i colAng1.NW_012120821v1 C 0 C 0 s canFam3.chr13 21788703 5 - 63241923 TTATC i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e aotNan1.NW_018493494v1 9845811 4217 + 11631747 I e cebCap1.NW_016107603v1 488212 0 + 3802414 C e saiBol1.JH378162 14655455 0 + 15139346 C e calJac3.chr3 145769498 9 + 190850796 I a score=419051.000000 s hg38.chr9_KI270719v1_random 147019 46 + 176845 TTAGTGGCTTTAATGATATGGAAAGTTGA-AGTTTAGAGTGAGAAAA s panTro5.chr4 87081811 46 + 194502333 TTAGTGGCTTTAATGATGTGGAAAGTTGA-AATTTAGAATCAGAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87857968 46 + 195804263 TTAGTGGCTTTAATGATGTGGAAAGTTGA-AATTTAGAATCAGAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3464 46 + 15539 TTAGTGGCTTTAATGATATGGAAAGTTGA-AGTTTAGAGTGAGAAAA i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42640188 46 + 85365473 TTAGTGGCTTTAATGACATGGAAAGTTGA-AATTTAGAATGAGAAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50410 46 + 80219 TTAGGGGCTTTAATGATATGGAAAGTTGA-AGTTTAGAATGAGAAAA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144533598 46 - 189454096 TTAGTGGCTTTAATGATATGGAAAGTTGA-AATTTAGAATGAGAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648342 46 + 39453387 TTAGTGGCTTTAATGATATGGAAAGTTGA-AATTTAGAATGAGAAAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267635 46 + 25348628 TTAGTGGCTTTAATGATATGGAAAGTTGA-AATTTAGAATGAGAAAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268523 46 + 48547382 TTAGTGGCTTTAATGATATGGAAAGTTGA-AATTTAGAATGAGAAAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 42053 46 + 294823 TTAGTGGCTTTAATGATATGGAAAGTTGA-AATTTAGAATGAGAAAA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4315107 46 + 12320365 TTAGTGGCTTTAATGATATGGAAAGATGA-AATTTGGAATAAGAAAA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14655455 46 + 15139346 TTAGTGGCTTTAATGATATGGAAAGTTTA-AGTTTAAAAGGAGCCAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 488212 46 + 3802414 TTAGTGGCTCTAATGATATGGAAAGTTTA-AGTTTAGAATGAGCAAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9850028 46 + 11631747 TTAGTGGCTTTAATGATATGGAAAGTTTA-AGTTTAGAATGAGCAAA i aotNan1.NW_018493494v1 I 4217 C 0 s canFam3.chr13 21788708 47 - 63241923 TTGGAAACCTTAAAGATACGGATAATTGAGAGTTTCTAAGGAGAAGA i canFam3.chr13 C 0 I 389 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e calJac3.chr3 145769498 9 + 190850796 I a score=57054.000000 s hg38.chr9_KI270719v1_random 147065 9 + 176845 GCACCAAAA s panTro5.chr4 87081857 9 + 194502333 GCGCCAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87858014 9 + 195804263 GCGCCAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3510 9 + 15539 GCACCAAAA i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42640234 9 + 85365473 GCGCCAGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50456 9 + 80219 GCACCAAAA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144533644 9 - 189454096 GTACCAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648388 9 + 39453387 GTACCAGAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267681 9 + 25348628 GTACCAGAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268569 9 + 48547382 GTACCAGAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 42099 9 + 294823 GTACCAGAA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4315153 9 + 12320365 GCACCAGAA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14655501 9 + 15139346 ATGCCAAAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 488258 8 + 3802414 ATGCC-AAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9850074 9 + 11631747 ATGCCAAAA i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21788755 389 - 63241923 I e calJac3.chr3 145769498 9 + 190850796 I a score=335462.000000 s hg38.chr9_KI270719v1_random 147074 37 + 176845 AAGAAAATAATCAGTCTCCTGACTTTCATATCTGGTA s panTro5.chr4 87081866 37 + 194502333 AAGAAAATAATCAGTCTCCTGGCTTTCACATCTGGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 87858023 37 + 195804263 AAGAAAATAATCAGTCTCCTGGCTTTCACATCTGGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3519 37 + 15539 AAGAAAATAATCAGTCTCCTGACTTTCATATCTGGTA i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42640243 37 + 85365473 AAGAAAATAATCAGTCTCCTGGCTTTCACATCTGGTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50465 37 + 80219 AAGAAAATAATGAGTCTCCTGCCTTTCACATCTGGTA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144533653 37 - 189454096 AAGAAAATACTCAGTCTCCTGGCTTTCATATCTGGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648397 37 + 39453387 AAGAAAATACTCAGTCTCCTGGCTTTCATATCTGGTA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267690 37 + 25348628 AAGAAAATACTCGGTCTCCTGGCTTTCATATCTGGTA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268578 37 + 48547382 AAGAAAATACTCAGTCTCCTGGCTTTCATATCTGGTA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 42108 37 + 294823 AAGAAAATACTCAGTCTCCTGGCTTTCATATCTGGTA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4315162 37 + 12320365 AAGAAAATAATCAGTCTCCTGGCTTTCATATCTGGTA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14655510 37 + 15139346 ATGAAAATAATCAGTCTCCTGGCTTTCACATCTGGTA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 488266 37 + 3802414 ATGAAAATAATCAGCCTCCTGCCTTTCACATCTGGTA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9850083 37 + 11631747 ATGAAAATAATCAGTCTCTTGGCTTTCACAACTGGTA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21789144 31 - 63241923 AAGAAGAACATCCATCTCCTGACTCT------TGGTG i canFam3.chr13 I 389 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e calJac3.chr3 145769498 9 + 190850796 I a score=1904024.000000 s hg38.chr9_KI270719v1_random 147111 185 + 176845 GTCT-TAGAATGAATGTCAGAACTGTCACAGGTCAAAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAACACCATGT---------TTTAGAAG----TGCATGATTATCCTTCTTGATGTTAATCtcacaacttaaggacatgcttgccaaacatcataatttctcttaataactcatatcagataaatctcc s panTro5.chr4 87081903 185 + 194502333 CTCT-TAGAATGAATGTCAGAACTGTCACAGGTCAGAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACAGTGAACACCATGT---------TTTAGAAG----TACATGATTATCCTTCCTGATGTTAATCtcagaacttaaggacatgattgccaaacatcataatttctcttaataactcatattagataaatctcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 87858060 185 + 195804263 GTCT-TAGAATGAATGTCAGAACTGTCACAGGTCAGAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACAGTGAACACCATGT---------TTTAGAAG----TACATGATTATCCTTCCTGATGTTAATCtcagaacttaaggacatgattgccaaacatcataatttctcttaataactcatattagataaatctcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3556 185 + 15539 GTCT-TAGAATGAATGTCCGAACTGTCACAGGTCAAAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAACACCATGT---------TTTAGAAG----TAAATGATTGTCCTTCTTGATGTTAATCtcacaacttaaggacatgcttgccaaacatcataatttctcttaataactcatatcagataaatctcc i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42640280 189 + 85365473 GTCT-TAGAATGAATGTCAGAACTGTCACAGGTCAGATAATGA-ATGACCCAGTATGTTTTCAAATAAGTGACACTGAACACCATGT---------TTTAGAAG----TACATGATTATCcttcctgatgttaatctcaaagctcaaggacctgcttgctaaacatcataatttctcttaataactcatatcagataaatctcc i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50502 185 + 80219 GTCT-TAGAATGAATGTCAGAATTGTCACAGGTCAAAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAACACCATGT---------TTTAGTAG----TACATGATTGTCCTTCCTGATGCTAACCTCAGCACttaaggacatgcttgccaaacatcataatttctcttaataactcatatcagataaatctcc i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144533690 185 - 189454096 GTCT-TAGAATAAATGTCAGAACTGTCACAAGTCAGAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAATACCATGT---------TTTAGAAG----TACATGATTATCCTTCCTGATGTTAATCTCAAAACTCAAGGACATGCTTGCCAAACATCATAATTTCTCTtaataactcatatcagataaatctct i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648434 185 + 39453387 GTCT-TAGAATAAATGTCAGAACTGTCACAAGTCAGAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAATACCATGT---------TTTAGAAG----TACATGATTATCCTTCCTGATGTTAATCtcaaaactcaaggacatgcttgccaaacatcataatttctcttaataactcatatcagataaatctct i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267727 185 + 25348628 GTCT-TAGAATAAATGTCAGAACTGTCACAAGTCAGAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAATACCATGT---------TTTAGAAG----TACATGATTATCCTTCCTGATGTTAATCtcaaaactcaaggacatgcttgccaaacatcataatttctcttaataactcgtatcagatacatctct i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268615 185 + 48547382 GTCT-TAGAATAAATGTCAGAATTGTCACAAGTCAGAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAATACCATGT---------TTTAGAAG----TACACGATTTTCCTTCCTGATGTTAATCtcaaaacttaaggacatgcttgccaaacatcataatttctcttaataactcatatcagataaatccct i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 42145 185 + 294823 GTCT-TAGAATAAATGTCAGAACTGTCACAAGTCAGAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAATACCATGT---------TTTAGAAG----TACATGATTATCCTTCCTGATGTTAATCtcaaaactcaaggacatgcttgccaaacatcataatttctcttaataactcgtatcagatacatctct i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4315199 185 + 12320365 GTCT-TAGAGTAAATGTCAGAACTGTCACAGGTCAGAT----A-ATGGCCTAGTATTTTTTCAAATAAGTGACACTGAATAGCATGT---------TTTAGAAG----TACATGATTATCCTTCCTGATGTTAATCtcaaaacttaaggacatgcttgccaaacatcataatttctcttaataactcatatcagataaatctct i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145769507 175 + 190850796 GTCT-T--AATGGATGTCAGAACTGTCACAGGTCAGAT----A-ATGGCCCA--ATGTTTTCAAATAAGTGACACTGAACAACATGT---------TTTAAAAA----TACATGATTGTCCTTCCTG------ATCttaaaacttaaggacatgcttgccaaacatcataattttccctaataactcatATCAGAAAAatctgc i calJac3.chr3 I 9 C 0 s saiBol1.JH378162 14655547 183 + 15139346 GTCT-T--AATGAATGTCAGAACTGTCACAGGTCAGAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAACACCATGT---------CTTAAAAG----TACAtgattgtccttcctgatgtttatcttaaaacttaaggacatgcttgccaaacatcataatttctcttaataactcatATCAGATGAATCTCT i saiBol1.JH378162 C 0 I 152 s cebCap1.NW_016107603v1 488303 183 + 3802414 GTCT-T--AATGAATGTCAGAACTGTCACAGGTCAGAT----A-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAACACCATGT---------TTTAAAAG----TACATGATTGTCCTTCCTGATGTTTATCTTAAAACTTAAGGACATGCTTGCCAAACATCATAATTTCTCTTAATAACTCATAtcagataaatctcc i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9850120 183 + 11631747 GTCT-T--AATGAATGTCAGAACTGTCACAAATCAGAT----G-ATGGCCCAGTATGTTTTCAAATAAGTGACACTGAACATCATGT---------TTTAAAAG----TACACGATTGTCCTTCCTGATGTTTATCttaaaacttaaggacatgcttgccaaacatcataatttctcttaataactcatATCAGATAAAACtcc i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21789175 194 - 63241923 GTCTCTACAACCAATGTCAGAATTGTAACAGG-CAGAT----ATATGGCCTAGCATAATTTATGACAGGGGGTGGTGAGGACCACACCCCCCTATATATAAAAGTCTATATATAATTGTCCTTCCCAATGTCCATCTCACAATGTAGGGGC---TTTCCCAAACATGGTGCTTTTCCTT--TAACTCGGACCAGtcatatctcc i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I a score=12376.000000 s hg38.chr9_KI270719v1_random 147296 1 + 176845 a s panTro5.chr4 87082088 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 87858245 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3741 1 + 15539 a i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42640469 1 + 85365473 a i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50687 1 + 80219 a i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144533875 1 - 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648619 1 + 39453387 a i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267912 1 + 25348628 a i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268800 1 + 48547382 a i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 42330 1 + 294823 a i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4315384 1 + 12320365 a i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145769682 1 + 190850796 a i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14655882 1 + 15139346 a i saiBol1.JH378162 I 152 C 0 s cebCap1.NW_016107603v1 488486 1 + 3802414 a i cebCap1.NW_016107603v1 C 0 I 5753 s aotNan1.NW_018493494v1 9850303 1 + 11631747 a i aotNan1.NW_018493494v1 C 0 I 6022 s canFam3.chr13 21789369 1 - 63241923 a i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I a score=1861032.000000 s hg38.chr9_KI270719v1_random 147297 273 + 176845 gtggagacctatgctctggactccagacttatgccaagtagcctaattactatctccacttgcaggcaaaataggcatctcaaagtgaacatacctcaaaaagagctcttaatctccttctactattctccccacttacccagcatcttctccattctcaCcttctctcatcatgttcctcatatc----aggaggtaatagactccatccttatagttatacagTTATTAAGCCACAAAACACCCTGTTTATACCCTTGGCAGCC-CTAtttttttt---- s panTro5.chr4 87082089 270 + 194502333 gcgaagacctgtgctctggactctggactcatgctaagtagcctaattgcactctattcttggaggcaacataggcatctcaacgtgaacatacctcgaaaagagctcttaatctctctctac---tctcctcacttccccagcatcttccctattctcaCCTTCTCTCATCATCTTCTTCACGTCAGTTAGCAGGTAATAAACTCCATCCCTATACTTAAACAGTTATTAAGCCACAAAACACCTTGCTTATATGCTTGACTGCC-C----CCTTTT---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 87858246 270 + 195804263 gcgaagacctgtgctctggactctggactcatgccaagtagcctaattgcactctattcttggaggcaacataggcatctcaaagtgaacatacctcgaaaagagctcttaatctctctctac---tctcctcacttccccagcatcttccctattctcaCCTTCTCTCATCATCTTCTTCACGTCAGTTAGCAGGTAATAAACTCCATCCCTATACTTAAACAGTTATTAAGCCACAAAACACCTTGCTTATATGCTTGACTGCC-C----CATTTT---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 3742 271 + 15539 gtggagacctatgctctggactccagacttatgccaagtagcctaattactatctccacttgcaggcaaaataggcatctcaaagtgaacatacctcaaaaagagctcttaatctccttctactattctccccacttacccagcatcttccccattctcaCcttctctcatcatgttcctcatatc----aggaggtaatagactccatccttatagttatacagTTATTAAGCCACAAAACACCCTGTTTATACCCTTGGCAGCC-CTA--TTAttt---- i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42640470 273 + 85365473 gcgaagacctgtgctctggattccagactcgcgccaagtagcctaattacactctatacttagaggcaaaataggcatctcaaagtgaacatatctcgaaaagagctcttaatctccctctactattctccccacttccccagcatcttccccattctcaCcttctctcatcatcttcctcatgtcagttagcaggtaataaactccatccctatagctgtacagttcttaagccacaaaacaccttgcttatatgcttgactgcc-c----CAtttt---- i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50688 269 + 80219 gcagagaactatgctctggcctccagactcatgccaggtagcctaagtactatctccacttggaggcaaaataggcatctcaaagtgaacatacctcgaaaagagctcttaatctccctctactctgctccccacttacccagcatcttgtccattctcaCCTTCTCTCATCACGTTCCTCATGTCAGG----AGGTAATAGACTCCGTCCTTATAGTTATACAGTTATTAAGCCACAAAACACCTTGCTTATATCCTAGGCTGCC-C----CCCGCC---- i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144533876 273 - 189454096 gggaagaccaatgctctggactcgagacttataccaagtagcctaattacactccatactcggagacaaaataggcatctcaaagtgaacataccttgaaaagagctcttaatctccctctactattctctccacttctccagcatcttctccattctcaCCTTCTCTCATCATCTTCCTCATGTCGGTTATCAGGTAATAAACTCCATCCCTATAGTTATAAAGTTATTAAGCCACAAAACACCTTGCTTATATGCTTGACTGTC-C----CAtttt---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648620 273 + 39453387 gggaagaccagtgctctggactcgagacttataccaagtagcctaattacactctatacttggagacaaaataggcatctcaaagtgaacataccttgaaaagagctcttaatctccctctactattctccccacatctccagcatcttccccattctcaccttctctcatcatcttcctcatgtcagttatcaggtaataaacTCCATCCCTATAGTTATAAAGTTATTAAGCCACAAAACACCTTGCTTATATGCTTGACTGCC-C----CAtttt---- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1267913 273 + 25348628 gggaagaccaatgctctggactcgagacttataccaagtagcctaattacactctatacttggagacaaaataggcatctcaaagtgaacataccttgaaaagagctcttaatctccctctactattctccccacttctccagcatcttcctcattctcaCCTTCTCTCATCATCTTCCTCATGTCAGTTATCAAGTAATAAACTCCATCCCTATAGTTATAAAGCTATTAAGCCACAAAACACCTTGCTTATATGCTTGACTGCC-C----CAtttt---- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5268801 273 + 48547382 gggaagaccattgctctggactcgagacttataccaagtagcctaattacaatctatacttggagacaaaataggcatctcaaagtgaacataccttgaaaagagctcttaatctccctctactattctccccacttctccagcatcttccccattctcaccttctctcatcttcttcctcatgtcagttatcaggtaataaacTCCATCCCTATAGTTATAAAGTTATTAAGCCACAAAACACCTTGCTTATATGCCTGACTGCC-C----CAtttt---- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 42331 273 + 294823 gggaagaccaatgctctggactcaagacttataccaagtagcctaattacactctatacttggagacaaaataggcatctcaaagtgaacataccttgaaaagagctcttaatctccctctactattctccccacttctccagcatcttccccattctcaccttctctcatcatcttcctcatgtcagttatcaggtaataaacTCCATCCCTATAGTTATAAAGCTATTAAGCCACAAAACACCTTGCTTATATGCTTGACTGCC-C----CAtttt---- i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4315385 273 + 12320365 gggaagaccaatgctctggactccagacttttaccaagtagcctaattacactctatacttggagacaaaataggcatctcaaagtgaacataccttgaaaagagctcttaatctccctctactattctccccacttccccagcatcttctccattctcaccttctctcatcatcttcctcaagtcagttatcaggtaataaactccatccttATAGTTATAAAGTTATTAAGGCACAAAACACCTTGCTTATATGCTTGACTGCC-C----CAtttt---- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145769683 268 + 190850796 gcagagacctgtgctctggactccagactgatgccacatagcctacttactgtctttaccttgaggtaaaataggcctctcaaagtgaacatacctcaggaagagctcttaatctccctctactcttctccccacttccccagcatcttccccattctcaCcttctctcattgtgttccccaaatttgttagcaggtaatagacttcatcc------ttatacagttattaagccccaaaacacgttgcttgtatccttgactGACAC----TAtttt---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14655883 272 + 15139346 gtagagacctgtgctctggactccagactgatgtcacgtagcctacttactgtc--tacctggaggcaaaataggcatctcaaagtgaacatacctcaggaagagatcttaatctccctctactattctccccacttccccagcatcttccccattctcaCCTTCTCTCATCATGTTCCCCACATTGGTTAACAGGTAATAGACTTCATCCTTATAGTTATATAGTTATTAAGCCCCAAAACACATTGCTTGTATCCTTGACTGACAT----CACttt---- i saiBol1.JH378162 C 0 C 0 s canFam3.chr13 21789370 196 - 63241923 gctgaaagctctgcactggactctaaac------caaggtgcctccctaccatctccacttggaggcataatagacatctctaagatagtatagcc--aacatagctcttaatc----tctact-----------------------------attttcactatctct--------------------------gtcaataaactccgtccttctagtta---agtcctca-----------accttggttttctctttaactccc-c----tagttctttt i canFam3.chr13 C 0 I 1192 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I a score=2417812.000000 s hg38.chr9_KI270719v1_random 147570 363 + 176845 ttt----taattatac-tttaagttctgtgatacaggtgcagaacatgcaggtttgttacataggtatacatgtgtcatggtggtttgctgcacctatcaacctgtcatctacattaggtatttctgctaatgctatccctcc-cttaccccccacccc-ctgacaggcccttgtgtgtaatattcccctccctgtatccatgtgttcttattgttcaactcccacttatgagtgagaatatgcagtgtttggttttctgttcctgtgttagtttgctgagaatgatggtttccagctttatctatgtccctgcaaaggacatgaacacattcttttttatggctgcataatattccatggtatatatgt s panTro5.chr4 87082359 364 + 194502333 TAA----AAattatac-tttaagttctgggatacatgtgcagaacgtgcagatttgttacataggtatacatgtgccatggcggcttgctgcaccaatcaacccgtcatctacattacgtatttctcctaatgctatccctcc-cttgcccgccaccccgccaacaggccctggtgtgtgatgttcccctccctgtgcccatgtgttctcattgttcagctcccacttgtgagtgagaatatgcagtatttggttttctgttggtgtgttagtttgctgaaaatgatggtttccagcttcgtctatgtccctgcaaaggacatgaacatgatcttttttatggctgcatagtattccatggtgtatatgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 87858516 364 + 195804263 TAA----AAattatac-tttaagttctgggatacatgtgcagaacgtgcagatttgttacataggtatacatgtgccatggcggcttgctgcaccaatcaacccgtcatctacattacgtatttctcctaatgctatccctcc-cttgcccgccaccccgccaacaggccctggtgtgtgatgttcccctccctgtgcccatgtgttctcattgttcagctcccacttgtgagtgagaatatgcagtatttggttttctgttggtgtgttagtttgctgaaaatgatggtttccagcttcgtctatgtccctgcaaaggacatgaacatgatcttttttatggctgcatagtattccatggtgtatatgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 4013 361 + 15539 ttt----aaattatac-tttaagttctgtgatacaggtgcagaacatgcaggtttgttacataggtatacatgtgccatggtggtttgctgcacctatcaacctgtcatctacattaggtatttctgctaatgctat-cctcc-cttaccc-ccacccc-ctgacaggcccttgtgtgtaatattcccctccctgtatccatgtgttcttattgttcaactcccacttatgagtgagaatatgcagtgtttggttttctgttcctgtgttagtttgctgagactgatggtttccagcttcatctatgtccctgcaaaggacatgaacacattcttttttatggctgcataatattccatggtatatatgt i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42640743 361 + 85365473 ttt------gttatac-tttacattctgggatacatgtgcagaacttgcagatttgttacataggtatacatgtgccatggtggtttgctgcacccatcaacccatcatctacattagatatttctcctgatactatccctcc-ctttctccccacacc-ctgacaggtcccggtgtgtgatggtcccctccctgtgcccatgtgttctcattgttcaactcccacttatgagtgacaatatgcagtgtttggttttctgttcctgtgttagtttgctgagaatgatggtttccagcatcatccatgtccctgcaaaggacatgaacacattcttttttatggctgcatagtattccatggtgtatatgt i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 50957 367 + 80219 TTTTAAAAAattatacttttaagttctgggatacatgtgcagaatgtgcaagcttgttacatatgtatacatgtgctacggtggttcgctgcaaccatcaac-tgtcatctacattaggtatttctcctaatgctctccctcc-cttgcccactacccc-ctgacaggccccagtgtgtgatgttcccctccctgtgtccatgtgttctcattgttcaacttccacttatgagtgagaatatgcagtgtttggttttctgttcctgtgttagtttgctgagaatggtgatttccagcttcatctatgtccctgcaaaggatgtgaacacattcctttttatggttgcgtagtattccatagtgtatatgt i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144534149 360 - 189454096 ttt----gaattatac-tttaagttctgggatacacgtgcaaaatatgcagatttgttacacaggtatacatgagccatggtggtttgctgcacccatcaacttgttacctacattaggtatttctcctaatgctatccct-c-cttgctcctcacacc-ctgacaggcctaggtgtgtgatgttaccctccc--tgtccatgtgttctcattgttcaagtcccacttatgagtgagagtatgcagtatttggttttctgttcctgtgttagcttgctgagaatgatggtttccagcttcacctacgtccctgcaaaggacatgaacacattcttttttatggccatatagtattctctggtatatatgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3648893 360 + 39453387 ttt----gaattatac-tttaagttctgggatacacgtgcaaaatatgcagatttgttacacaggtatacatgagccatggtggtttgctgcacccatcaacttgttacctacattaggtatttctcctaatgctatccct-c-cttgctcctcacacc-ctgacaggcctaggtgtgtgatgttaccctccc--tgtccatgtgttctcattgttcaagtcccacttatgagtgagagtatgcagtatttggttttctgttcctgtgttagcttgctgagaatgatggtttccagcttcacctacgtccctgcaaaggacatgaacacattcttttttatggccatatagtattctctggtatatatgt i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1268186 360 + 25348628 ttt----gaattatac-tttaagttctgggatacacgtgcagaatatgcagatttgttacacaggtatacatgagccatggtggtttgctgcacccatcaactccttacctacattaggtatttctcctaatgctatccca-c-cttgctcctcacacc-ctgacaggcctacgtgtgtgatgttcccctccc--tgtccatgtgttctcattgttcaagtcccacttatgactgagagtatgcagtatttggttttctgttcctgtgttagcttgctgagaatgatggtttccagcttcacctacgtccctgcaaaggacatgaacacattcttttttatggccatatagtattctctggtatacatgt i cerAty1.NW_012002843v1 C 0 I 2625 s chlSab2.chr27 5269074 360 + 48547382 ttt----gaattgtac-tttaagttctgggatacacgtgcaaaatatgcagatttgttacacaggtatacatcagccatggtggtttgctgcacccatcaactcgttacctacattaggtatttctcctaatgctatccct-c-cttgctcctcacacc-ctaacaggcctaggtgtgtgatgttaccctccc--tgtccatgtgttctcattgttcaagtcccacttatgagtgagagtatgcagtatttggttttctgttcctgtgttagcttgctgagaatgatggtttccagcttcacctacgtccctgcaaaggacatgaacacattcttttttatggccatatagtattctctggcatatatgt i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 42604 360 + 294823 ttt----gaattatac-tttaagttctgggatacacgtgcagaatatgcagatttgttacacaggtatacatgagccatggtggtttgctgcacccatcaactccttacctacattaggtatttctcctaatgctatccct-c-cttgctcctcacacc-ctgacaggcctacgtgtgtgatgttcccctccc--tgtccatgtgttctcattgttcaagtcccacttatgactgagagtatgcagtatttggttttctgttcctgtgttagcttgctgagaatgatggtttccagcttcacctacgtccctgcaaaggacatgaacacattcttttttatggccatatagtattctctggtatatatgt i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4315658 360 + 12320365 ttt----gatttatac-tttaagttctgggatacatgtgcagaatgtgcagattggttacacaggtatgcatgagccatggtggtttgctgcacccatcaacctgttacctacattaggtatttctcctaatgctatccct-c-cttgctcctcacacc-ctgacaggcctagatgtgtgatgttgctctccc--tgtccatgtgttctcattgttcaagtcccacttatgagtgagagtatgcagtatttggttttctgttcctgtgttagtttgctgagaatgatggcttccagcttcacctacgtccctgcaaaggacatgaacacattcttttttatggccgtatagtattctctggtatatatat i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145769951 354 + 190850796 tta----aaattatac-tttaagttctgagatacatgtgcagaaggtgcagattgattgtataggtatacctgtgccatggcagtttgctgcacccatcaagccatcatctacattaggtatttctcctaatgctatccctccacttgttccccacctc-ctgacagggcccaatgtgtgatgttcccctccctatgtccatgtgttctatttattcaactcctgcttatgaatgagagcacagagtgtttgcttttctgtttttgtgttagtttgctg----------tttccagcttcatccatgtccctgcaaaggacatgtactcatcctttgttatggctgcagagtattccatggtgtatgtgt i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14656155 353 + 15139346 tta----aaattatac-tttaagtcctgagatacatgtgcagaaggtgcaggtttgttgcataggtatatctgtgccatggcggttcgctgcacccatcaacccatcatctacattaggtatttctcctaatgctatccctccacttgtcctccacctc-ctgacaggccccaatgtgtgatgttcccctccctgtgtccatgtgttcta-ttgttcaactccttcttatgagtgagagcatagagtgtttgcttttctgttcctgtgttagtttgctg----------tttccagcttcatccatgtccctgcaaaggacatgaactcatccttttttatggctgcagagtattcgatggtgtatgtgt i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I a score=91073.000000 s hg38.chr9_KI270719v1_random 147933 14 + 176845 gccacattttcttt s panTro5.chr4 87082723 14 + 194502333 gccacattttcttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 87858880 14 + 195804263 gccacgttttcttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 4374 14 + 15539 gccacattttcttt i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42641104 14 + 85365473 gccacattttcttt i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 51324 14 + 80219 gtcacattttcttt i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144534509 14 - 189454096 gccacattttcttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3649253 14 + 39453387 gccacattttcttt i macNem1.NW_012011022v1 C 0 I 2958 s chlSab2.chr27 5269434 14 + 48547382 gccacattttcttt i chlSab2.chr27 C 0 I 2933 s manLeu1.NW_012101853v1 42964 14 + 294823 gccacattttcttt i manLeu1.NW_012101853v1 C 0 I 2805 s colAng1.NW_012120821v1 4316018 14 + 12320365 cctacattttcttt i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145770305 14 + 190850796 gccacattgtcttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14656508 14 + 15139346 gccacattgtcttt i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I a score=14085.000000 s hg38.chr9_KI270719v1_random 147947 4 + 176845 atcc s panTro5.chr4 87082737 4 + 194502333 atcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 87858894 4 + 195804263 atcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 4388 4 + 15539 atcc i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42641118 4 + 85365473 atcc i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 51338 4 + 80219 atcc i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144534523 4 - 189454096 tttc i macFas5.chr5 C 0 I 769 s colAng1.NW_012120821v1 4316032 4 + 12320365 atcc i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145770319 4 + 190850796 atcc i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14656522 4 + 15139346 atcc i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I a score=453198.000000 s hg38.chr9_KI270719v1_random 147951 160 + 176845 aggctatcattgatgggcatttgggttggttccaagtctttgctattgtgaataatgctgcaggaaacatacatgtgcatgtgccaaccccatcaaaaagtggacaaaggatatgagcagacacttctcaaaagaagaaatttatgcggccaacaaacat s panTro5.chr4 87082741 160 + 194502333 agtctatcattgatggggatttggataggttccaagtctttgctattgtaaataatgctgcaataaacatacatgtgcatgtgccaaccccatcaaaaagtgggcaaacaatatgaacagacacttctaaaaagaagaaatttatgcagccaacgaacat i panTro5.chr4 C 0 C 0 s panPan2.chr4 87858898 160 + 195804263 agtctatcattgatggggatttggataggttccaagtctttgctattgtaaataatgctgcaataaacatacatgtgcatgtgccaaccccatcaaaaagtgggcaaacaatatgaacagacacttctaaaaagaagaaatttatgcagccaacgaacat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 4392 160 + 15539 aggctatcattgatgggcatttgggttggttccaagtctttgctattgtgaatagtgctgcagtaaacatacatgtgcttgtgccaaccccatcaaaaagtgggcaaaggatgtgaacagacacttatcaaaagaagaaatttatgcggccaacaaacat i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42641122 160 + 85365473 agtctatcattgatgggcatttgggttggttccaagtctttgttattgtaaataatgctccaataaacatatgtgtgaatgtgccaaccccatcaaaaagtggacaaaggatatgaacagacacttctcaaaagaagaaatttatgcagccaacgaacat i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 51342 160 + 80219 agtctatcattgatgagcacttgggttggttccaagtcttggctattgtaaatagtactgcaataaacataggtgtgcatgtgccaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagaaatttatgcggccaacaaacat i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s colAng1.NW_012120821v1 4316036 160 + 12320365 aggctatcattgatgggcatttgggttggttccaagtctttgctattgtaaataatgctgcaataaacatacgtgtgcatgtgccaaccccatcaaaaagtgggcaaaggatatgaacagacacttatcaaaagaagaagtttatgcagccaatgaacac i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145770323 159 + 190850796 agtctatcattgat-ggtatttgggttggtttcaagtctttgctattatgaatggtgctgcaataaatgtatatgtacatgtgccaaccccatcaaaaagtgggtgaagcatataagcaaacacttctcaaaagaagaaatttataaggccaacaaacat i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14656526 160 + 15139346 agtctatcattgatgggcatttgggttggttccaagtctttgctactgtgaatagtgctgcaataaacgtatgtgtacatgtgccaatcccatcaaaaagtgggtgaagcatataaatgaacacttctcaaaagaagaaatttatgaggccaacaaacat i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144534527 769 - 189454096 I a score=8190.000000 s hg38.chr9_KI270719v1_random 148111 2 + 176845 at s panTro5.chr4 87082901 2 + 194502333 at i panTro5.chr4 C 0 C 0 s panPan2.chr4 87859058 2 + 195804263 at i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 4552 2 + 15539 at i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42641282 2 + 85365473 at i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 51502 2 + 80219 at i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s papAnu3.chrUn_NW_003882528v1 26997 2 - 38561 at i papAnu3.chrUn_NW_003882528v1 N 0 I 2606 s colAng1.NW_012120821v1 4316196 2 + 12320365 at i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145770482 2 + 190850796 at i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14656686 2 + 15139346 at i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144534527 769 - 189454096 I a score=57845.000000 s hg38.chr9_KI270719v1_random 148113 22 + 176845 gaaaaaaagctcatcatcactg s panTro5.chr4 87082903 22 + 194502333 taaaaaaagctcatcatcactg i panTro5.chr4 C 0 C 0 s panPan2.chr4 87859060 22 + 195804263 taaaaaaagctcatcatcactg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01008057v1 4554 22 + 15539 gaaaaaaagctcatcatcactg i gorGor5.CYUI01008057v1 C 0 C 0 s nomLeu3.chr20 42641284 22 + 85365473 taaaaaaagctcatcatcactg i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 51504 22 + 80219 ggaaaaaagctcatcatcacta i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s colAng1.NW_012120821v1 4316198 22 + 12320365 ttaaaaaaactcatcatcatcg i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145770484 21 + 190850796 gaaaaaaa-ctcaccatcactg i calJac3.chr3 C 0 I 4195 s saiBol1.JH378162 14656688 22 + 15139346 gaaaaaaagctcaccatcactg i saiBol1.JH378162 C 0 I 2796 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144534527 769 - 189454096 I a score=172388.000000 s hg38.chr9_KI270719v1_random 148135 103 + 176845 tgctgggtccatcccgcagaccctggctgagcaacagaagaaaggagtactcagacacaaatatacagggtaagagcaggctaggaggctgcgagcactaggg s panTro5.chr4 87082925 103 + 194502333 tgccgggtgcatcctgcagaccctgactgagcgacagaagaaaggagtactcagacacaggtatacagtgtaaaagcaggctaggggactgctggcactaggg i panTro5.chr4 C 0 n 0 s panPan2.chr4 87859082 103 + 195804263 tgccgggtgcatcctgcagaccctgactgagcgacagaagaaaggagtactcagacacaggtatacagtgtaaaagcaggctaggggactgctggcactaggg i panPan2.chr4 C 0 N 0 s gorGor5.CYUI01008057v1 4576 103 + 15539 tgccgggtccatcccgcagaccctggctgagcaacagaagaaaggagtactcagacgcaaatatacagggtaagagcaggctaggaggctgcgagcactaggg i gorGor5.CYUI01008057v1 C 0 N 0 s nomLeu3.chr20 42641306 103 + 85365473 tgccgggtccatcccgcagaccctggctgactgacggaagaaaggagtactcagacacaggtatacagtgtaagagcaggctaggggactgctggcactaggg i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 51526 103 + 80219 ggctgagtccatcctgcagaccctggccaagtaacagaagaaaggagtactcagacagaagtatacagggtaagagcaggctagggggctgccagcactaggg i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s colAng1.NW_012120821v1 4316220 103 + 12320365 tgctgggtccatcctgcagaccctggctgagcaatggaagaaaggagtactcagacaccggtacacagggtaagagtaagctaggggactgctggcactaggg i colAng1.NW_012120821v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144534527 769 - 189454096 I a score=51051.000000 s hg38.chr9_KI270719v1_random 148238 31 + 176845 gcagaggagagttagcagtctcagtaagaca s panTro5.chr20 31526149 31 + 66533130 gcAGAGGagagttagcagtctcgataagcca i panTro5.chr20 I 64055 C 0 s panPan2.chr4 187874 31 - 195804263 gcAGAGGagagttagcagtctcgataagcca i panPan2.chr4 N 0 C 0 s gorGor5.CYUI01000881v1 64884 31 - 87586 gcAGAGGagagttagcagtctagataagcca i gorGor5.CYUI01000881v1 N 0 C 0 s nomLeu3.chr20 42641409 31 + 85365473 gctgaagagagttagcagtctcaataagcca i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 51629 31 + 80219 acagaggagagttagcagtctcgataagcca i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s colAng1.NW_012120821v1 4316323 31 + 12320365 gctgtagagagttagcagtctccataagcca i colAng1.NW_012120821v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144534527 769 - 189454096 I a score=4471564.000000 s hg38.chr9_KI270719v1_random 148269 2050 + 176845 gagctgcttgtat-ttattcagtactggtataacgtccaaggcctggagtcaacacaattgctgggtaattaacatttttgctccctcttacagggagcagtctcatgctcagaagttcaaaagtcagtttcctgatgacataagtaaacaagcctatttagataaacttctttacttttccttgcacctacttctcacccttagcctcagagaaagagaattttcttccttcacctttattctctcatgaagcttttgcaagaccttccaacctttcaagaaggcttgcgtctttccttatagct------------------tctcccaccaccctgaccgatctcccacatcactggtcattagagaaatgcaaatcaaaaccacagtgagataccatcccacgccagttagaatgacgaccactaaaaagtcaggaaacaatagacactggagaggatatggagaaataggaatgcttttacactgttgatgggagtgtaagttagttcaactattgtggaaggcagtgtggcgatttctcaaggttctagaaccagaaataccatttgacccagcaatcccattactaggtttctacccaaagtattataaatcattctacGttttttttt-------gacatggagtttcactctcgtcatccaggttggagtgcaatggcatgatcttggctcactgcaaccaccacctcctgggttcaagtgattcccttgcctcagcttcctgaggagctgggattacaggcacccgccaacatgcccggctaa-tgtttgtatttttaatagagacggggtttcaccatgttggccaggctggtttcaaactcctgacctcaggtaatccacccatctcagcctcccaaagtgcagtgattacaggactaagctacgactcccagccAccctcattttttt----atagctcatactatgttaacaaattttatcaatagtaattcaaaacatcttcagattctgttcctgtctcaccaccatcactaccaccctgattcaaa-ccaccatctctccactctccagttaggtttactgctatagccgcctaactggtcttcctacttccctgtagccccttgccttcagtctattctagtttctgcaattagggtgattctttaagaatatgtcagacggagccattcttctg-ttaaaaccctccaatgacttcactctccatcccactcaAGgtattagtttcctcaggctactgtaacaaattaccaccaactgagtaggttaaaattacagaaatttatcctctcacagttctggaggctaggagttgaaagtaaggtgtcatcagggtcatggtctct--gaaggctccaggggaggatccttccttgtcttttcttagcttctcacagttgccatcaatccttggcattctttggcttgtagttacatgactccaatctcttccttcatcttcacat-actttatcc-actatgtgtttttctaaatatccacgttcttacaagcacactagtcatttgataagggcccatctgaatccacttaacttgactgactaggcaagattttatttccaagtaatgtcatatttacaagtactgagagttgggatttgaacatctttttggggaagac----------------------------ataattcaacccaCAGTACTCACATCCCAAAGCTCCTTACCATGCACACATCTCCAGTCctttggtattcaaagtgtgatacacagaccagtagcaccagcatcccctgaaacttgtaagaaatataaactctccagaccacctgaatcagaatctttattttaatgtgaaacctaggtgatttatatgcaaattagaatctgagaagcaTACCCCTCAAAACAACCTGCCTACTTTTcttattatttcatctgctcctcactccatatcactctgtcattactctgcttgtgtcatattggcctttttgatattcctgtagtgcctggactattcctcccccagatatttgcatgggttatttactcacctgcaccagatataaaga------tacagttattatatatagtgatatataattatacatata s panTro5.chr20 31526180 2055 + 66533130 gagctgcttgtat-ttattcagtaactgtataatgtccaaggcccggagccaacacaattgctgggtaattaacatcattgctcccccttacagggagcagtctcatgctcagaggttcaaaagtcaatttcctgatgacataagtaaacaagcctatttagataaactgctt-acttttccttgcacctacttcttgcccttagcctcagagtaagagaattatcttccttcacctttattctctcatgaagcttttgcaagaccttccaacctttcaagagggcttgcatctttccttatagct------------------tctcccaccaccctgaccaatctcctacatcactggtcattagagaaatgcaaatcaaaaccacagtgagataccatcccatgccagttagaatggcgaccactaaaaagtcaggaaacaatagatgctggagaggatatggagaaatcagaatgcttttacactgttgatgggagtgtaagttagttcaactattgtggaaggcagtgtggtgatttcccaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtttctacccaaagtattataaatcattccacAttttttttttttttttgacatggagtttcactctcgttgtccaggttggagtgtgatgacatgatcttggctcactgcaaccaccacttcctgggttaaagtgattcccttgcctcagcttcctgagtagctgggattacaggcacctgccaccatgcccagctaa-tgtttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtaatccacccatctcagacttccaaagtgctgggattacaggagtaaaccaccactcccAAGCAccctcattttttt---tatagctcatactatgttaacaaattttatccatagtaattcaaaacatcttcagattctgttcctgtctcaccaccatcactaccaccctgatccaaa-ccaccatccctccactctccagttaggtttactgctatagcc-cttaactggtgttcctgcttccctgtagccccttgccttcagtctattctagtctctgcaattaggttggttctttaagaatatgtcagactgagccattcttctg-tttaagccctccaatgacttcactctccatcccactcaatgcattagtttcctcaggctactgtaacaaattaccaccaactgagtagcttaaaagtacagaaatttattctctcacagttctggaggctaggagttgaaagtaaggtgtcatcagggtcatggtctctttgaaccctccaggggaggatccttccttgtcttttcctagcttctcacagttgccatcaatccttggcattctttggcttgtagttacatggctccaatctcttccttcatcttcacat-accttatct-actgtgtgtttttccaaatatcctcgttcttacaagcacactagtcatt-gataagggtccatctgaatccacttaagttgactgactaggcaagattttatttccaagtaaggtcatatttacaagtactgagagttgggacttgaacatctttttggggaagac----------------------------aaaattcaacccacagtactcaaatcc-aaagc-ccttaccatgcacacatctccagtcctttggtattcaaagtgtgatacacagaccagtagcaccagcatcccctgaaacttgtaagaaatataaacactccagaccacctgaatcagaatctttattttaatgtgaaacctaagtgatttatatgcaaattagaatctgagaagcatacccctcaaaacgacatgcctacttttcttattatgtcatctgctcctcactccatatcactctgtcattactctgctcgtgtcatattggcctttttgatattcctgtagtgcctggactattcctcctccagatatttgtatgggttatttactcacctgcaccagatataaaga------tatagttattatatatagtgatacataattacacatata i panTro5.chr20 C 0 C 0 s panPan2.chr4 187905 2050 - 195804263 gagctgcttgtat-ttattcagtaactgtataatgtccaaggcccggagccaacacaattgctgggtaattaacatcattgctcccccttacagggagcagtctcatgctcagaagttcaaaaatcaatttcctgatgacataagtaaacaagcctatttagataaactcctt-acttttccttgcacctacttcttgcccttagcctcagagtaagagaattatcttccttcacctttattctctcatgaagcttttgcaagaccttccaacctttcaagagggcttgcatctttccttatagct------------------tctcccaccaccctgaccaatctcctacatcactggtcattagagaaatgcaaatcaaaaccacagtgagatactatcccatgccagttagaatggcgaccactaaaaagtcaggaaacaatagatgctggagaggatatggagaaatcagaatgcttttacactgttgatgggagtgtaagttagttcaactattgtggaaggcagtgtggtgatttcccaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtttctacccaaagtattataaatcattccacAttttttttt-----ttgacatggagtttcactctcgttgtccaggttggagtgtgatgacatgatcttggctcactgcaaccaccacttcctgggttaaagtgattcccttgcctcagcttcctgagtagctgggattacaggcacctgccaccatgcccagctaa-tgtttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtaatccacccatctcagacttccaaagtgctgggattacaggagtaaaccaccactcccAAGCAccctcattttttt---tatagctcatactatgttaacaaattttatccatagtaattcaaaacatcttcagattctgttcctgtctcaccaccatcactaccaccctgatccaaa-ccaccatccctccactctccagttaggtttactgctatagcc-cttaactggtgttcctgcttccctgtagccccttgccttcagtctattctagtctctgcaattaggttggttctttaagaatatgtcagactgagccattcttctg-tttaagccctccaatgacttcactctccatcccactcaatgcattagtttcctcaggctactgtaacaaattaccaccaactgagtagcttaaaagtacagaaatttattctctcacagttctggaggctaggagttgaaagtaaggtgtcatcagggtcatggtctctttgaaccctccaggggaggatccttccttgtcttttcctagcttctcacagttgccatcaatccttggcattctttggcttgtagttacatggctccaatctcttccttcatcttcacat-accttatct-actgtgtgtttttccaaatatcctcgttcttacaagcacactagtcatt-gataagggtccatctgaatccacttaagttgactgactaggcaagattttatttccaagtaaggtcatatttacaagtactgagagttgggacttgaacatctttttggggaagac----------------------------aaaattcaacccacagtactcaaatcc-aaagc-ccttaccatgcacacatctccagtcctttggtattcaaagtgtgatacacagaccagtagcaccagcatcccctgaaacttgtaagaaatataaacactccagaccacctgaatcagaatctttattttaatgtgaaacctaagtgatttatatgcaaattagaatctgagaagcatacccctcaaaacgacatgcctacttttcttattatttcatctgctcctcactccatatcactctgtcattactctgctcgtgtcatattggcctttttgatattcctgtagtgcctggactattcctcctccagatatttgtatgggttatttactcacctgcaccagatataaaga------tatagttattatatatagtgatacataattacacatata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 64915 2035 - 87586 gagctgcttgtat-ttattcagtaattgtataatgtccaaggcccggagccaacacaattgctgggtaattaacatcattgctccctcttacagggagcagtctcatgctcagaagttcaaaagtcagtttcctgatgacataagtaaacaagcctatttagataaactcttt-acttttccttgcacctacttctcacccttagcctcagag-aagagaattttcttccttcacctttattctctcatgaagcttttgcaagaccttccaacctttcaagaaggcttgcgtctttccttatagct------------------tctcccaccaccctgaccaatctcc-AcatcactggtcattagagaaatgcaaatcaaaaccacagtgagataccatcccatgccagttagaatggcgaccactaaaaagtcaggaaacaatagacactggagaggatatggagaaataggaatgcttttacactgttgatgggagtgtaagttagttcaactattgtggaaggcagtgtggtgatttctcaaggttctagaaccagaaataccatttgacccagcaatcccattactaggtttctacccaaagtattataaatcattctacAttttttttt-------gacatggagtttcactctcgtcatccaggttggagtgcaatggcatga-cttggctcactgcaaccaccacctcctgggttcaagtgattcccttgcctcagcttcctgaggagctgggattacaggcacc-gcca-catgcccggctaa-tgtttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtaatccacccatctcagcctcccaaagtgct--gattacaggagtaagccaccattccca-gcAccctcattttttt---tatagctcatactatgttaacaaattttatcaatagtaattcaaaacatcttcagattctgttcctgtctcaccaccatcactacc-ccctgattcaaa-ccaccatctctccactctccagttaggtttactgctatagcc-cctaactggtcttcctacttccctgtagccccttgccttcagtctattctagtttctgcaattagggtgattctttaagaatatgtcagaccgagccattcttctc-ttaaaaccctccaatgacttcactctccatcccactcaa-gtattagtttcctcaggctactgtaacaaattaccaccaactgagtaggttaaaagtacagaaatttattctctcacagttctggaggctaggagttgaaagtaagatgtcatcagggtcatggtctct--gaaggctccaggggagaatccttccttgtcttttcctagcttctcacagttgccatcaatccttggcattctctggcttgtagttacatgactccaatctcttccttcatcttcacat-actttatcc-actgtgtgtttttctaaatatccacgttcttacaagcacactagtcatt-gataaggg-ccatctgaatccacttaacttgattgactaggcaagattttatttccaagtaatgtcatatttacaagtactgagagttgggatttgaacatctttttggggaagac----------------------------acaattcaacccacattactcacatcccaaagctccttaccatgcatgcatttccagtcctttggtattcaaagtgtgatacacag-ccagtagcaccagcatcccctgaaacttgtaagaaatataaactctccagaccacctgaatcagaatctttattttaatgtgaaacctaggtgatttatatgcaaattagaatttgagaagcatacccctcaaaacgacctgcctacttttcttattatttcatctgctcctcactccatatcactctgtcattactctgcttgtgtcatattggcctttttgatattcctgtagtgcctggactattcctcc-ccagatatttgcatgggttatttactcacctgCACCAGatataaaga------tatagttattatatatagtgatatataattatacatata i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42641440 2012 + 85365473 gagctgcttgtat-ttattcagtagtggtataatgtcaaaggcctggagccaacacaattgctgggtaattaacattattgctcccccttacagggagcagcctcacatgcagatgatcaaaggtcagtttccggacaacataagtaaacaagcctatttagataaactcctttacatttccttgcacctacttctcacccttagtctcagggtaacataattagctgccttcacatttattctcttccgaaggttttgcaagactccccgacctttcaagaaggcttgcatctttccttatagct------------------tctcccaccaccctgaccaatctcctacatcactggtcattagagaaatgcaaatcaaaaccacagtgagatacgatctcatgccagttagaatggtaaccattaaaaagtcaggaaacaacagattctggagaggatgtggagaaataggaatacttttacacagttcgtgggagtgtatattacttcaaccattgtggaagacaatgtggcgattcctcaagaatctagaaccagaaataccattttccccagcaatcccattactgggtttatacccaaaggattataaatcattctacAttttttttt-------gacatggagtttcactctagtcacccaggttggagtgcaatggcttgatcttggctcactgcaaccactgcctcctgggttcaaacgattcccttgcctcagcttcccaagtagctgggattacaggcacccaccaccatgcc--gttaa-tttttttatttttagtagagacggggtttcaccatgtcggccaggctggtctcgaactcctgacctcaggtaatcca-ccatctcagcctcccaaagtactgggattataggcataagccaccactcccagccACCTGCATttttttt--tatagctcatactatgttaacaaattttatcaatagtaattcaaaa------cagattctgttcttgtctcaccactatcactaccaccctgatccaa----accatctctccactctccagttaggtttactgctatagccgcctaactggtcttgctgcttccctgtagcctcttgccttcagtctattcttgtctctgcaattagggtgattctttaaaagtatgacagactgagccattctactgttttaaaccctccagtggtttcattctccatcccactcaAtgtattagcttcctaaagctactgtaacaaattaccaccaactgagtagcttaaaagtacagaaattcattctctcacagttctggaggacaggagttgaaagtaaggtgtcatcaggatcatgctctctctgaaggctccaggggaggatccttccttgtc--ttcctagcttcccacagttgccatcaatccttggcattctttggcttgtagttacataactccaatctcttccttcatcttcacatgaccttatcc-actgtgtgtttttagaaatatcctcattcttatgagcacactagtcattcagtaagagcccacctgaatccacttaacttgattgactaggcaagattttatttccaagtaaggtcatatttacaagtactgagagttgggacttgaacatcatttt-aggaagat----------------------------acaattcaacccacaGTACTCAAATCC-AAACC-CCTAATCATGCACACATCTCCAGTCctttggtattcaaagtgtgatacacagaccattagcaccagcatcacctggaacgtgtaa-------------------------gaatcagattttttattttaatgtgaaacctaagtgatttatatgcaaataagaatttgaaaagcaTA-CCCTTAAAatgacctgcctacttttattattatttcatctgctactcactccatatcactctgtcattgctctgcttcagtcatattggcctttttgatattcctgaagtgcctggactagtcctcccccagatatttgcatgggttattcactcacctgcacaagatataaaga------tatagttaaaatgtatagtgatatataattatatatat- i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 51660 2043 + 80219 gagctgcttgtat-ttattcagtactggtataatgtccaaggcctggagccaacataattgctgggtaattaacattattgctc-ccctaacaggg-gcagtctcatgctcagaagttcaaaagtcagtttccggatgacacaagtaaacaagactatttagataaactcttttacttttccttgcacctatttctcgtccttagcctcagggtaagagaattcgctgccttcacctttattctctcacgaagcttttgcaagaccttccaacctttcaagaaggcttgcgtctttccttatagct------------------tctcccaccaccctgactgacatcct-----actggtcattagagaattgcaagtctaaaccacagtgagataccatcccacgccagttagaatggcaacctttaaaaagtcaggaaacaacagatgctgtagaggatgtggagaaataagaatgcttttacactgttcaagggagcgtaagttagttctaccattgtggaaggcagtgtggagatttctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtttctacccaaagtattataaatcattctCCATTAtttgtt-------gacatggagtttcactctcgtcgtccaggctggagtacaatggcatcatcttggctcactgcaactgccacctccttggttcaagtgattcccttgcctcagcttcctgactagctgggattacaggcacctgccaccaagcccagctaa-tgtttgtatttttagtagagacaaggtttcacgatggtggccaggctggtctcgaactgctgacctcaggaaatccacccatctcggcctcccaaagtgctgtgattacaggagtaagctgccactcccagtcACcctcttttttttttatatagctcatagcatgttaataagttttatcaatagtaattcaaaacatcttcagattctgttcctgtgtcaccaccatcactaccaccctgatccaaa-ccaccatctctgcactctccagttagatttactgctatagccgcctaactggtcttcctgcttccctgtagccccttgccttcggtctattcttgtctctgcaattagggtgatt-tttaagaatatgtcagaa-gagccattcttctg-tttaaaccctccaatgacttcattctccatcccactcaatgtattagtttcctca-gctactaaaacaaattaccaccaactgagtagcttaaaagtacagaaacttattctctcacagttttggaggccaggagttgaaagtaaggtgtcatcagggtcatggtctctctgaaggctccgggggaggatccttccttgtcttttcctagcttctcatagttgccatcaatccttggcattctttggcttgtagttacatgattccaatctcttccttcatcttcacat-accttatcc-actgtgtgtttttccaaatatccttgttcttacaagcacgctagtcatttgataagggcccatgtgaatccacttaactcgattgaccaggcaaggttttatttccaggtaaggtcacatttacaaattctgagagttgggctttgaacatctttttggggaagac----------------------------acagttcaacccacagtactcaagtcc-aaagc-ccttaccatgcacagatctccagtcctttggtattcaaagtgtgatacatagaccagtaacaccagcatcacctgaaacttgtaagaaatacaaactctccagaccacctgaatcagaatctttattttaatgtgaaacctaagtgatttatatgcaaattagaa-ttgagaagcatacccctcaaaatgacctgcctacttttcttattatttcatctgctcctcactccgtatcactctgtcattagtctgctttcatcatattggcctttttgatattcctgtagtgcctgcactattcctcccgcagatatttgcaTGGGTTATCTAATTACTTGCACCAGATGTAAAGA------TACAGTTATTATGTATAGTGCTATATAATTATACATATA i rheMac8.chrUn_NW_014841389v1 C 0 I 4 s macFas5.chr5 144535296 2084 - 189454096 gggctgcacacatcttatccagtagt-gtataatgtcaaaggcctggagccaacacaattcctgggtaattaacaatattgctctcccttacagggagcagcctcacatgcagatgatcaaaggtcagtttcaggacaacataagtaaatgagcctatttagataaactcctttacatttccttgcacctacttcttgcctctagtctcaagataagataattagctgccttcacctttattctctcccaaagcttttgcaataccttctgacctttcaagaaggcttgcatctttccttatagct------------------tctctcaccaccctgaccaatctcctacatcactggtcattagagaaatgcaaatcaaaaccacagtgagataccatctcacgccagttagaatggtgaccattaaaaagtcaggaaacaacagattctggagaggatgtggagaaacaggaatggttttacactgttcacaggagtgtatattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctagaaccagaaataccatttgccccagcaatcccattactgggtttatacacaaaggattataaatcattccacAttttttttt-------gatatgaagtttcactctagtcacccaggttggagtacaatggcttgatcttggctcactgcaacctctacttcctgggttcaagtgattcccttgcctcagcttcccaagtaggtaggattacaggtgcctgccactacgcccaactaattttttttatttttagtagagacagggtttcaccacgttgaccctgctggtctcgaactcctgacctcaggtaatcca-ccatctcagcctcccaaagtgctgggattacaggcgtaaatcaccactcccagccACcccttttttt-----tatagctcatactatgttaacaaattttatcaatagtcattcaaagcatcttcagattctgttcctgtctcaccaccatcactaccaccctgatccaaa-ccaccatctctccactctccagtaaggtttgctgcaatagctgcttaactggtcttgctgattccttgtagccccttgccttcagtctattcttgtctctgcaatgagggtgattctttaaaagtaggtcagactgagccattcttctg-tttaaaccctccaatgactttattctccatcccactcaAtgtattagtttcctcaggctactgtaacaaattaccaccaactgagtagcttaaaagtacagaaatttattctctcacagttctggaggctaggagttgaaagtaaggtgtcatcagggtcatgctctctctgaaggctccaggggagaatcattccttgtcttttcctagattctcttagttgccatcaatccttggcattctttggcttgtagttacatgactccaatctcttccttcatcttcacatgaccttatcctactgtgtgtttttacaaatatcctcattcttatgagcacactagtcgttcgataagagcccacctgaatccagttaacttgattgactaggcaagattttatttccaagtaagttcatgtttacaagtactgagagttgggacttggacgtctttttgaggaagacatcactggtctattaaaaagtctacagtacagtacaatccacagtactcaaattc-gaagc-ccttatcatgcacacatctccagtcctttggtattcaaagtatgatacacagaccattagcaccagcatcacctggatcacttaaaaaatataaactctccagaccacctgaatcagattttttattttaatgtgaaacctaagtgatttatatgcaaataagaatttgagaagcata-cccttaaaatgacctgcctacttttcttattatgtaatctgctactcactccgcatcactctgtcattactctgctttggtcatattggcctttttgatattccagaagtgcctggactagtcctcccccagatttttgcatgggttattcactcacctgcaccgGatataaagatatagttatagttattatgtatagtgatatataattatatatata i macFas5.chr5 I 769 C 0 s colAng1.NW_012120821v1 4316354 2074 + 12320365 gagctgcttgtat-ttatctagtagtggtataatgtcaaaggcctggagccaacacaattgctgggtaattaacaatattgctcccccttacagggagcagcctcacatgcagatgatcaaaggtcagtttcaggacaacataagtaaacaagcctatttagataaactcctttacatttccttgcacctacttcttgcccctagtctcaagataagataattagctgccttcacctttattctctcccaaagcttttgcaataccttccgacctttcaagaaggcttgcatctttccttatagcttctctcaccaccctgacctctctcaccaccctgaccaatctcctatatcactggtcattagagaaacacaaatcaaaaccacagtgagataccatctcacgccagttagaatggttaccattaaaaagtcaggaaacaacagattctggagaggatgtggagaaacaggaatgcttttacactgttcgtaggagtgtatattagttcaaccactgtggaagacagtgtggcgattcctcagggatctagaactagaaataccatttgccccagcaatcccattactgggtttatacataaaggcttataaatcattctacAttttttttt-------aatatggagtttcactctagtcacccaggttagagtgcaatggcttgatcttggctcactgaaaactctgcctcctgggttcaagtgattccctt-cctcagcttcccaagtagctgggattacaggtacctgccaccatgcccagctatttttttttatttttagtagagacagggtttcaccacgttggcccaggtggtctcaaactcctgacctcaggtaatcca-ccatctcagcctcccaaagtgctgggattacaggcgtaaatcaccactcccagccAcccttttttttt----tatagctcatactatgttaacaaattttatcaatagtcattcaaaacatcttcagattctgttcctgtctcaccaccatcactaccaccctgatccaaacccaccatctctccactctccagtaaggtttgctgcaatagctgcctaactggtcttgctgcttccctgtagccccttgccttcagtctattcttgtctctgcaatgagggtgattctttaaaagtaggttagactgagccattcttctg-tttaaaccctccaatgactttattctccatcccactcaatgtattagtttcctcaggctactgtaacaaattaccaccaactgagtagcttaaaagtacagaaatttgttctctcacagttctggaggctaggagttgaaagtaaggtgtcatcagggtcatgctctctctgaaggctccaggggagaatccttccttgtcttttcctagattctcatagttgccatcaatccttggcattctttggcttgtagttacatgactccaatctcttccttcatcttcacatgaacttatccgactgtgtgttttcacaaatatccttactcttatgagcacactagtcatt-gataagagcccacctgaatccaattaacttgattaactaggcaagattttatttccaagtaagttcatatttacaaatactgagagttgggacttgaacgtctttttgaggaagac----------------------------acaattcaatccacagtactcaaatcc-aaagc-ccttatcatgcacacatctccagtcctttggtattcaaagtatgatacacagatcattagcacgagcatcacctggatcacttaagaaatataaactctccagaccacctgaatcagattttttattttaatgtgaaacctaagtgatttatatgcaaataagaatttgagaagcata-tccttaaaatgacctgcctacttttcttattatttcatctgctactcactccgcatcactctatcattactctgctttggtcatattggcctttttgatattccagaagtgcctggactagtcctcccccagatttttgcatgggttattcactcacctgcaccagatataaagatatagttatagttataatgtatagtgatatataattttacatata i colAng1.NW_012120821v1 C 0 I 4 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I a score=-6540.000000 s hg38.chr9_KI270719v1_random 150319 21 + 176845 ttat-cacacatatatataACA-- s panTro5.chr20 31528235 9 + 66533130 ttat-aactt-------------- i panTro5.chr20 C 0 C 0 s panPan2.chr4 189955 9 - 195804263 ttat-aactt-------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 66950 19 - 87586 ttatcaacatatataAACA----- i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643452 5 + 85365473 -----aactt-------------- i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144537380 6 - 189454096 ------ACTT------------CA i macFas5.chr5 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318428 4 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e rheMac8.chrUn_NW_014841389v1 53703 4 + 80219 I a score=91630.000000 s hg38.chr9_KI270719v1_random 150340 53 + 176845 CAGTGCAGTTGTTCCTG----------------------------------------------------------------------------GATAATCTATTTTAAATATACATCCTATCAACCCCA s panTro5.chr20 31528244 52 + 66533130 cagtgcagttgttcctg----------------------------------------------------------------------------gatattctattttaaatatacatcctatcaaccc-a i panTro5.chr20 C 0 C 0 s panPan2.chr4 189964 52 - 195804263 cagtgcagttgttcctg----------------------------------------------------------------------------gatattctattttaaatatacatcctatcaaccc-a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 66969 53 - 87586 CAGTGCAGTTGTTCCTG----------------------------------------------------------------------------GATAATCTATTTTAAATATACATCCTATCAACCCCA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643457 53 + 85365473 cagtgcagccgttccta----------------------------------------------------------------------------gatattctattttaaatatacatcccatcaacccca i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 53707 49 + 80219 CAGCTCAGTTGTTCCTG----------------------------------------------------------------------------GATATTCTATTTTAAATACACATCCTAT----CCCA i rheMac8.chrUn_NW_014841389v1 I 4 C 0 s macFas5.chr5 144537386 127 - 189454096 --GTGCAGCCATTCCTGGATATTCTATTTNNNNNNNNNNgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggccTGATattctattttaaatatacatcccatcaacccca i macFas5.chr5 C 0 C 0 s colAng1.NW_012120821v1 4318432 53 + 12320365 cagtgcagccattcctg----------------------------------------------------------------------------gatattctattttaaatatacatcccatccacccca i colAng1.NW_012120821v1 I 4 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I a score=10152.000000 s hg38.chr9_KI270719v1_random 150393 3 + 176845 TTC s panTro5.chr20 31528296 3 + 66533130 ttc i panTro5.chr20 C 0 C 0 s panPan2.chr4 190016 3 - 195804263 ttc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67022 3 - 87586 TTC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643510 3 + 85365473 ttc i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 53756 3 + 80219 TTC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537513 3 - 189454096 ttc i macFas5.chr5 C 0 C 0 s colAng1.NW_012120821v1 4318485 3 + 12320365 ttc i colAng1.NW_012120821v1 C 0 C 0 s rhiBie1.NW_016814732v1 203160 3 + 665040 ttc i rhiBie1.NW_016814732v1 N 0 N 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I a score=5096.000000 s hg38.chr9_KI270719v1_random 150396 2 + 176845 TT s panTro5.chr20 31528299 2 + 66533130 tt i panTro5.chr20 C 0 C 0 s panPan2.chr4 190019 2 - 195804263 tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67025 2 - 87586 TT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643513 2 + 85365473 tt i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 53759 2 + 80219 TT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537516 2 - 189454096 tt i macFas5.chr5 C 0 C 0 s colAng1.NW_012120821v1 4318488 2 + 12320365 tt i colAng1.NW_012120821v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I a score=16044.000000 s hg38.chr9_KI270719v1_random 150398 8 + 176845 CTTCCTTG s panTro5.chr20 31528301 8 + 66533130 cttccttg i panTro5.chr20 C 0 C 0 s panPan2.chr4 190021 8 - 195804263 cttccttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67027 8 - 87586 CTTCCTTG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643515 8 + 85365473 cttccttg i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 53761 8 + 80219 CTTCCTTG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s colAng1.NW_012120821v1 4318490 8 + 12320365 cttccttg i colAng1.NW_012120821v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C a score=5595.000000 s hg38.chr9_KI270719v1_random 150406 4 + 176845 CTTT s panTro5.chr20 31528309 4 + 66533130 cttt i panTro5.chr20 C 0 I 9 s panPan2.chr4 190029 4 - 195804263 cttt i panPan2.chr4 C 0 I 8 s gorGor5.CYUI01000881v1 67035 4 - 87586 CTTT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 53769 4 + 80219 CTTT i rheMac8.chrUn_NW_014841389v1 C 0 I 10 s colAng1.NW_012120821v1 4318498 4 + 12320365 cttt i colAng1.NW_012120821v1 C 0 I 7 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=251284.000000 s hg38.chr9_KI270719v1_random 150410 319 + 176845 TTCTAATTCAAACGTATTTATTTCCACAAATTTTTATCCACAGCTAAATATTACAGTGACTATTCCAAGCATTTTTCTATAAAGAAAGGTGTAGTTTACAGATTTGTTCAAAGTGGAAAAATATTTTCATCAGTAGTCTTTCTTCCCTGGTGTTAGGTTCACCCCTGAAT--GTTCTGAACTCTTCCGGAGAGGCAGTCCTTCATCTAAATGTCAGCGGGTGGCAAAATGTTATATTCAAATCTGGATTATTCTGATACAGTGTCACTTCAGAAAGTAGCTTAGTTTCATTTCTGGTTGATCCCCTTTGTTAGAATTAGGA s panTro5.chr20 31528322 320 + 66533130 TTTTTATTCAAAAGTATTTATTTCCACAAATTTTTATCCACAGCTAAATATTAAAGTGACTATTCCAAGCAATTTTCTATAAACAAAGGTGTAGTTTACAGATTTGTTCAAAGTGGAAAAATATTTTCATCAGTAGTCTGCCT-CCATGGTGTTAGCGTCACCGCCGAATATGTTCTGAACTCTTCCGGAGAGGCAGCCCTTCCTCTAAATGTCAGTGGGCGGCAAAATGTTATATTAAAATATGGATTATTCTGATACAGTGTCACTTCAGAAAGTAGGTGAGTTTCATTTCTGGTTGATCCCCTTTGGTAGAATTAGGA i panTro5.chr20 I 9 C 0 s panPan2.chr4 190041 320 - 195804263 tttttattcaaaagtatttatttccaCAAATTTTTATCCACAGCTAAATATTAAAGTGACTATTCCAAGCAATTTTCTATAAACAAAGGTGTAGTTTACAGATTTGTTCAAAGTGGAAAAATATTTTCATCAGTAGTCTGCCT-CCATGGTGTTAGGGTCACCGCCGAATATGTTCTGAACTCTTCCGGAGAGGCAGCCCTTCCTCTAAATGTCAGTGGGCGGCAAAATGTTATATTAAAATATGGATTATTCTGATACAGTGTCACTTCAGAAAGTAGGTGAGTTTCATTTCTGGTTGATCCCCTTTGGTAGAATTAGGA i panPan2.chr4 I 8 C 0 s gorGor5.CYUI01000881v1 67039 320 - 87586 TTCTAATTCAAAAGTATTTATTTTCACAAATTTTTATCCACAGCTAAATATTACAGTGACTATTCCAAGCATTTTTCTATAAAGAAAGGTGTAGTTTACAGATTTGTTCAAAGTGGAAAAATATTTTCATCAGTAGTCTTTCTTCCCTGGTGTTAGGTTCACCCCTGAATATGTTCTGAACTCTTCCGGAGAGGCAGTCCTTCATCTAAATGTCAGTGGGTGGCAAAATGTTATATT-AAATCTGGATTATTCTGATACAGTGTCACTTCAGAAAGTAGGTGAGTTTCATTTCTGGTTGATCCCCTTTGTTAGAATTAGGA i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 53783 313 + 80219 TTTTTATTCAAAAG----TATTTCCATAAATTTTTATCCACAGCTAAATATTACAGGGAGCATTCCAAGCATTTTTCTGTAAACAAAGGTGTAGTTTACAGATTTGTTCAAAGTGG-AAAATATTTTCATCAGTA---TTTCTTCCATGGTGTTAGGTTCACCCCTGAATATGTTCTGAACTCTTTCGGAGAGACAGTTCTTCATCTAAATGTCAGGTGGTGGCAAAATGTTATATTCAAATCTGGATTGTTCTGATACAGTATCACTTCAGAATGTAGCTTAGTTTCATTTCTGATTGATCCCCTTTCTTAGAATTAGAA i rheMac8.chrUn_NW_014841389v1 I 10 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE948818v1 796963 5757 + 1045278 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=-1390.000000 s hg38.chr9_KI270719v1_random 150729 1 + 176845 -A s panTro5.chr20 31528642 1 + 66533130 -A i panTro5.chr20 C 0 C 0 s panPan2.chr4 190361 1 - 195804263 -A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67359 1 - 87586 -A i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 54096 1 + 80219 -A i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s tarSyr2.KE943013v1 61403 1 - 280608 T- i tarSyr2.KE943013v1 n 5757 I 463 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=1887.000000 s hg38.chr9_KI270719v1_random 150730 3 + 176845 -TTT s panTro5.chr20 31528643 4 + 66533130 CTTT i panTro5.chr20 C 0 C 0 s panPan2.chr4 190362 3 - 195804263 -CTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67360 3 - 87586 -TTT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 54097 3 + 80219 -CTT i rheMac8.chrUn_NW_014841389v1 C 0 I 1 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE943013v1 61404 463 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=910.000000 s hg38.chr9_KI270719v1_random 150733 1 + 176845 T s panTro5.chr20 31528647 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr4 190365 1 - 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67363 1 - 87586 T i gorGor5.CYUI01000881v1 C 0 C 0 s nasLar1.chr18 39780164 1 + 67975966 T i nasLar1.chr18 N 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 26999 2606 - 38561 I e tarSyr2.KE943013v1 61404 463 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e rheMac8.chrUn_NW_014841389v1 54100 1 + 80219 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=3090.000000 s hg38.chr9_KI270719v1_random 150734 2 + 176845 TT s panTro5.chr20 31528648 2 + 66533130 TT i panTro5.chr20 C 0 C 0 s panPan2.chr4 190366 2 - 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67364 2 - 87586 TT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 54101 2 + 80219 TT i rheMac8.chrUn_NW_014841389v1 I 1 C 0 s papAnu3.chrUn_NW_003882528v1 29605 2 - 38561 TT i papAnu3.chrUn_NW_003882528v1 I 2606 C 0 s nasLar1.chr18 39780165 2 + 67975966 TC i nasLar1.chr18 C 0 N 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE943013v1 61404 463 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=4095.000000 s hg38.chr9_KI270719v1_random 150736 3 + 176845 TTT s panTro5.chr20 31528650 3 + 66533130 TTT i panTro5.chr20 C 0 C 0 s panPan2.chr4 190368 3 - 195804263 TTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67366 3 - 87586 TTT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 54103 3 + 80219 TTT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s papAnu3.chrUn_NW_003882528v1 29607 3 - 38561 TTT i papAnu3.chrUn_NW_003882528v1 C 0 I 484 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE943013v1 61404 463 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=20605.000000 s hg38.chr9_KI270719v1_random 150739 29 + 176845 AAAAAACAATCTTTTGTATGTAATGACCT s panTro5.chr20 31528653 29 + 66533130 GAAAAACAATCTTTTGTATCTAATGACCT i panTro5.chr20 C 0 C 0 s panPan2.chr4 190371 29 - 195804263 GAAAAACAATCTTTTGTATCTAATGACCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67369 27 - 87586 AAAAA--AATCTTTTGTATGTAATGACCT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 54106 29 + 80219 GAAAAACAATGTTTTGTATCTAATGAACT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 29610 484 - 38561 I e tarSyr2.KE943013v1 61404 463 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=22997.000000 s hg38.chr9_KI270719v1_random 150768 25 + 176845 TTATAATAATAATAAATCCTGCCCT s panTro5.chr20 31528682 25 + 66533130 TTACAATAATAAGAAACCCTGTTCT i panTro5.chr20 C 0 C 0 s panPan2.chr4 190400 25 - 195804263 TTACAATAATAAGAAACCCTGTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67396 25 - 87586 TTATAATAATAATAAATCCTGCCCT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 54135 22 + 80219 ---TTATAATAAAAAACCCTGTCCT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s rhiRox1.JABR01070960v1 1223 25 - 1340 TTATAATAATAAAAAACTGAGTCCT i rhiRox1.JABR01070960v1 N 0 N 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 29610 484 - 38561 I e tarSyr2.KE943013v1 61404 463 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=315356.000000 s hg38.chr9_KI270719v1_random 150793 376 + 176845 GTGTTTGTCATTGGCATTAACCTCTGTCTACACCCTCTAATTCTCTAATTATGGCTCCAGTGGGTACAAAAGGTGAATTATGGTTATTTGGCTCATGCAGCAAATTAATTGGAGAAACTGATGACAAATAGTCTGTGAAGAACTACAAGGTCTTGCCCCATGCTGTCCCATTTTAGTTACCATTTAGTTATGTAGGCATTATACAAATGCCTCAAATTAGGACATCTTTGCTCTCTCAGTAGGTCGAGTTTATGAAAATTTACTTTATGCAGAAAAAATAAATTCTAATTTATTGGTTACCAGAATCTTAATGTATGAAGGTTCTAAGTAAATATTTGATGAATTGATGGTAGCAGCGTTAATTTTTAAATGTTCC s panTro5.chr20 31528707 376 + 66533130 GTGTTTGTCATTGGCATTAACCTCTGTCTACACCCTTTAATTCTCTAATTATGGCACCAGTGGGTACAAAAGGTGAATTATGGTTATTTGGTTCATGCAGCAAATTAATTGGAGAAACTGATGACAAATAGTCTGTGAAGAACTACAAGGTCTTGCCCCATGCTGTCCCATTTTAGTTACCATTTAGTTATGCAGGCATTATACAACTGCCTCAATTTAGGACACCCTTGCTGTCTTAGTAGGTCAAGTGTATGAAAATTTACTTTATGCAGAAGAAATAAATTCTAATTTATTGGTTACTGGAACCTTAATGTATGAAGGCTCTAAGTAAATATTTGATGAATTGATGGTAGCAGCATTAATGTTTAAATATTCC i panTro5.chr20 C 0 C 0 s panPan2.chr4 190425 376 - 195804263 GTGTTTGTCATTGGCATTAACCTCTGTCTACACCCTTTAATTCTCTAATTATGGCACCAGTGGGTACAAAAGGTGAATTATGGTTATTTGGTTCATGCAGCAAACTAATTGGAGAAACTGATGACAAATAGTCTGTGAAGAACTACAAGGTCTTGCCCCATGCTGTCCCATTTTAGTTACCATTTAGTTATGCAGGCATTATACAACTGCCTCAATTTAGGACACCCTTGCTGTCTTAGTAGGTCAAGTGTATGAAAATTTACTTTATGCAGAAGAAATAAATTCTAATTTATTGGTTACTGGAACCTTAATGTATGAAGGCTCTAAGTAAATATTTGATGAATTGATGGTAGCAGCATTAATGTTTAAATATTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67421 376 - 87586 GTGTTTGTCATTGGCATTAACCTCTGTCTACACCCTCTAATTCTCTAATTATGGCTCCAGTGGGTACAAAAGGTGAATTATGGTTATTTGGCTCATGCAGCAAATTAATTGGAGAAACTGATGACAAATAGTCTGTGAAGAACTACAAGGTCTTGCCCCATGCTGTCCCATTTTAGTTACCATTTAGTTATGTAGGCATTATACAAATGCCTCAAATTAGGACACCTTTGCTGTCTCAGTAGGTCGAGTGTATGAAAATTTACTTTATGCAGAAGAAATAAATTCTAATTTATTGGTTACCAGAATCTTAATGTATGAAGGTTCTAAGTAAATATTTGATGAATTGATGGTAGCAGCGTTAATTTTTAAATGTTCC i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 54157 366 + 80219 GTGTTTGTCATTGGCATTAACCTCTGTCTACACCCTCTAATTCTCTAATTATGGCACCAGTGGGTACAAAAGGTAAATTATGGTTATTTGGTTCGTGCAGCAAATTAATTGGAGAAACTGATGACAAATGTTCTGTGAAGAACTACAAGGTCTTACCCCATGCGGTCCCGTTTTAGTGACCATTTACTTATATAGGCATTATCCAAATGTCTCAATTTAGGACACCCTTGGTGTCTTA----GTCAAGTGTATGAAAA-----TTTATGCAGAAGAAATAAATTCTAATTTATTGGTTACTGGAATCTTAATGTATGAAGGCTCTAAGTAAATA-TTAATTAATTGATGGTAACAGCGTTAATTTTTAAAAGTTCC i rheMac8.chrUn_NW_014841389v1 C 0 I 28 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 29610 484 - 38561 I e tarSyr2.KE943013v1 61404 463 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=4874.000000 s hg38.chr9_KI270719v1_random 151169 10 + 176845 AAGCTCCTAG s panTro5.chr20 31529083 10 + 66533130 AAGCTCCAAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 190801 10 - 195804263 AAGCTCCAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67797 10 - 87586 AAGCTCCTAG i gorGor5.CYUI01000881v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 29610 484 - 38561 I e tarSyr2.KE943013v1 61404 463 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e rheMac8.chrUn_NW_014841389v1 54523 28 + 80219 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=512.000000 s hg38.chr9_KI270719v1_random 151179 4 + 176845 ----------------------tttt s panTro5.chr20 31529093 4 + 66533130 ----------------------TTTT i panTro5.chr20 C 0 C 0 s panPan2.chr4 190811 4 - 195804263 ----------------------TTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67807 4 - 87586 ----------------------TTTT i gorGor5.CYUI01000881v1 C 0 C 0 s tarSyr2.KE943013v1 61867 26 - 280608 TTGTGTAGtttgttgttgttgtcttt i tarSyr2.KE943013v1 I 463 I 1431 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 29610 484 - 38561 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e rheMac8.chrUn_NW_014841389v1 54523 28 + 80219 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=23598.000000 s hg38.chr9_KI270719v1_random 151183 56 + 176845 tttttttgttttgtttttGCAAAAGCCTTAAAGTTTGGTACTAAGGAAATCAAAG-A s panTro5.chr20 31529097 56 + 66533130 GTTTTCT-TTTTGTTTTTACAAAAGCCTTAAAATTTGGTACTAGGGAAATCAAAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr4 190815 56 - 195804263 GTTTTCT-TTTTGTTTTTACAAAAGCCTTAAAATTTGGTACTAGGGAAATCAAAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67811 54 - 87586 TTTTTG--TTTTGTTTTTACAAAAGCCTTAAAGTTTGGTACTAAGGAAATCAAAG-A i gorGor5.CYUI01000881v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 29610 484 - 38561 I e tarSyr2.KE943013v1 61893 1431 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e rheMac8.chrUn_NW_014841389v1 54523 28 + 80219 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=910.000000 s hg38.chr9_KI270719v1_random 151239 1 + 176845 A s panTro5.chr20 31529153 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr4 190871 1 - 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67865 1 - 87586 A i gorGor5.CYUI01000881v1 C 0 C 0 s papAnu3.chrUn_NW_003882528v1 30094 1 - 38561 A i papAnu3.chrUn_NW_003882528v1 I 484 I 5531 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e tarSyr2.KE943013v1 61893 1431 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e rheMac8.chrUn_NW_014841389v1 54523 28 + 80219 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=39639.000000 s hg38.chr9_KI270719v1_random 151240 83 + 176845 TCAACTCCCACCATCATGCTTCA-GGAAAGGGAAAAATGTCTACCTTTGGGTCTAACCTGCCTCCCAGGTGAGCCTACTGGTAC s panTro5.chr20 31529154 84 + 66533130 TCAACTCCCAACGTCATGCTTCATGGAAAGGGAAAAATGTCTACCTTTGGGTCTAATCTGCCTCCCAGGAGAACCTACAGGTAC i panTro5.chr20 C 0 C 0 s panPan2.chr4 190872 84 - 195804263 TCAACTCCCAACGTCATGCTTCATGGAAAGGGAAAAATGTCTACCTTTGGGTCTAATCTGCCTCCCAGGAGAACCTACAGGTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67866 82 - 87586 TCAACTCCCACCATCATGCTTCAGGGAAAGGGAAAAATGTCTACCTTTGGGTCTAATCTGCCTCCCAGG-GAGCCTACA-GTAC i gorGor5.CYUI01000881v1 C 0 C 0 e eulMac1.LGHX01003138v1 62749 59716 + 330844 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 61893 1431 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e rheMac8.chrUn_NW_014841389v1 54523 28 + 80219 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=31711.000000 s hg38.chr9_KI270719v1_random 151323 42 + 176845 TAGAACTGTAACTGCAACTATGATGGCACAGGGAAAATGCAT s panTro5.chr20 31529238 42 + 66533130 TAGAACTCTAACTGCAACTATGATGGCACAGGGAAAATGCAT i panTro5.chr20 C 0 C 0 s panPan2.chr4 190956 42 - 195804263 TAGAACTCTAACTGCAACTATGATGGCACAGGGAAAATGCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67948 42 - 87586 TAGAACTCTAACTGCAACTATGATGGCACAGGGAAAATGCAT i gorGor5.CYUI01000881v1 C 0 C 0 s eulMac1.LGHX01003349v1 61306 40 + 138336 CAAAAC--TGACTGCGGCGATGGTGGCACGGGGAGAATGCAT i eulMac1.LGHX01003349v1 n 59716 I 1070 e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 61893 1431 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e rheMac8.chrUn_NW_014841389v1 54523 28 + 80219 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=68221.000000 s hg38.chr9_KI270719v1_random 151365 126 + 176845 GTATGTAATATGCTTGTCGGCTTCAGCAACAACTCATGTATACATACACATTTACTATATGTAAACAGGTCCTGTATAATACTTAAAACACAAGTGTTTGATCTATAAATATTTGATTCTTAGTAT s panTro5.chr20 31529280 126 + 66533130 GTATGTAATATGCTTGCCGGCTTCAGCAACAACTCATGTATACATACACATTTACTATAAGTAAACAGGTCCCGTATAATACTTAAAACACAAGTGTTTGATCTATAAATATTTGATTCTTAATAT i panTro5.chr20 C 0 C 0 s panPan2.chr4 190998 126 - 195804263 GTATGTAATATGCTTGCCGGCTTCAGCAACAACTCATGTATACATACACATTTACTATAAGTAAACAGGTCCCGTATAATACTTAAAACACAAGTGTTTGATCTATAAATATTTGATTCTTAATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 67990 126 - 87586 GTATGTAATATGCTTGTCGGCTTCAGCAACAACTCATGCATACATACACATTTACTATATGTAAACAGGTCCCGTATAATACTTAAAACACAAGTGTTTGATCTATAAATATTTGATTCTTAGTAT i gorGor5.CYUI01000881v1 C 0 C 0 e eulMac1.LGHX01003349v1 61346 1070 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 61893 1431 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e rheMac8.chrUn_NW_014841389v1 54523 28 + 80219 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=895307.000000 s hg38.chr9_KI270719v1_random 151491 1056 + 176845 TTAAAATGCTTCTAATATTTTAAAAGACAAAACTCCACCATGATATCACATTGAACATTAAAATTATTCCCACAGCAACACTTATTTCAGAGAAACAATTGAGAAGTCAGTTATCTTAGTCACCACTAAAGGCACCTGGTGAGAAAAGC-TGAACTAAATTTTAAATATTAAAAAATTAAAGAGACATCTAGTGCAGAGTTCAAACCTTTATGTTGAATTGTTT--GAGTCGTTACTGATTTCATGATGCTGATAAGTGT----TTGAGTTGAAATGATTTTTTAAAATGCAGAGAAAATGCTAACAGAATATTATATAGTTCCCCTAAAGATGCTTCTTCTAACCT-CCAAGTATTAAATAAGACTGATCTAAATGTTAAGTACATATAAAGTATATATTTGCTAGTCATCTATAAATTTTAAGTACAATTCCAGTGATATACCTGTATCTTTTGGAAGAGAAGAACTAAACCTGCCGTTTCTTAGGCTAAATAGATGATTCATAAGGTCCTTCCCTCCCCATTTATTCTGATTGCCAAGCTTTT-GTTCAGTAAGCTCTTGGCATCTAGTGATTAACCAGTGACAGCAGACAGTAGTGACCAAGAGAGATGGAGAGAACGATGGTGTAAGACAGTATATAAGGACAGTAAGCCACTGTATTTGTGGAACCACTGCATGTCAAAACTCCTTAACACTCTAACAAAGCATTTTTGGTCTTTTAAGATTAAGGACAGTCCTTACATAAGGGACTCAGTTTCAAACTAAAGTGCATCAAAAAGCAAATTATACCCCACAAACAACTTTAAAGAGGTAGCCACAAACCCAGTTGTTTTAGATTGGCCTTCTAAATGAAGTCAGCACATGGATCCATGT-------------------GTGAGTGTCATGGACGTCAGTGATTATGTAACTGTAACTGAAAGAAAAAGGCACAGCTCTGCAGACACCCAAGAGAAGCTGGCATGTTTAATGTGGATGTAGAAGGGATAATGTCCATGGCAACTGATTGGAACACAACTGTCAGCAGCCTCAACACAGGCTAAGACTGGGTTAAGCCCCAGGAGATGCA s panTro5.chr20 31529406 1059 + 66533130 TTAAAATGCTTCTAATGTTTTAAAAGACAAAACTCCACCATGATATCACTTTGAACATTAAAATTATTCCCACAGAAACACTTATTTCAGACAAACAATTGAGAAGTCAGTTATCTTAGTCACCACTAAAGGCACCTGGTGGGTAAAGTGTCATCTAAATTTTAAATATTAAAAAATTAAAGAGACATCTAGTGCAGAGTTCAAACCTTTATGTTGAATTGTTAAAGAGTCATTACTGATTTCATGACACTGATAAGTGT----TTGAGTTGAAATGATTTTTAAAAATGCAGAGAAAATGCTAACAAAATATTATATAGTTCCCCTAAAGATGCTTCTTCTAACCT-CCAAATACTAAACAAGACAGATCTAAATATTAAGTACATATGAAGTATATATTTGTTAGTCATCTATAAATTTTAAGTACAATTCCAGTGATACACCTTTATCTTTTGGAAGAGAAGAACTAAACCTGCCATTTCTTAGGCTAAATGGACTATTCATAAGGTCCTCCCCTCCCCATTTATTCTAATTGCCAAGCTTTT-ATTCAGTAAGCTCTTGGCACCTAGTGATTAACCAGTGACAGCAAAGTGTAGTGACCAAGAGACATGGAGAGAATGATGGTGTAAGACAGTATATAAGGATAGTAAGCCACTGTGTTTGTGGAACCACTGCATGTCAAAACTCCTTAACACTCTAACAAGTCATTTTTGGTCTTTAAAGATTAAGGACAGTCCTTACATAAGAGACTCAGTTTCAAACTAAAGTGCATCGAAAAGCAAATTATACTTCACAAACAACTTTAAAGAGGTAGCCACAAACCCAGTTGTTTTAGGTTGGCCTTCTAAATGAAGTCAGCACATGGATCCACGT-------------------GTGAGTGTCATGGACGTCAGTGATTATGTAACTGTAACTGAAAGAAAAAGGCACAGCTCTGCAGACACCCAAGAGAAGCTGGCATGTTTAATGTGGATGTAGAGGGTATAATGCCCATGGCAACTGATTGGAACACAACTGTCAGCAGCCTTAACACAGGCTAAGACTGGGTTAAGCCCCAGGAGATGCA i panTro5.chr20 C 0 C 0 s panPan2.chr4 191124 1059 - 195804263 TTAAAATGCTTCTAATGTTTTAAAAGACAAAACTCCACCATGATATCACTTTGAACATTAAAATTATTCCCACAGAAACACTTATTTCAGACAAACAATTGAGAAGTCAGTTATCTTAGTCACCACTAAAGGCACCTGGTGGGTAAAGTGTCATCTAAATTTTAAATATTAAAAAATTAAAGAGACATCTAGTGCAGAGTTCAAACCTTTATGTTGAATTGTTAAAGAGTCATTACTGATTTCATGACGCTGATAAGTGT----TTGAGTTGAAATGATTTTTAAAAATGCAGAGAAAATGCTAACAAAATATTATATAGTTCCCCTAAAGATGCTTCTTCTAACCT-CCAAATACTAAACAAGACAGATCTAAATATTAAGTACATATGAAGTATATATTTGTTAGTCATCTATAAATTTTAAGTACAATTCCAGTGATACACCTTTATCTTTTGGAAGAGAAGAACTAAACCTGCCATTTCTTAGGCTAAATGGACTATTCATAAGGTCCTCCCCTCCCCATTTATTCTAATTGCCAAGCTTTT-ATTCAGTAAGCTCTTGGCACCTAGTGATTAACCAGTGACAGCAAAGTGTAGTGACCAAGAGACATGGAGAGAATGATGGTGTAAGACAGTATATAAGGATAGTAAGCCACTGTGTTTGTGGAACCACTGCATGTCAAAACTCCTTAACACTCTAACAAGTCATTTTTGGTCTTTAAAGATTAAGGACAGTCCTTACATAAGAGACTCAGTTTCAAACTAAAGTGCATCGAAAAGCAAATTATACTTCACAAACAACTTTAAAGAGGTAGCCACAAACCCAGTTGTTTTAGGTTGGCCTTCTAAATGAAGTCAGCACATGGATCCACGT-------------------GTGAGTGTCATGGACGTCAGTGATTATGTAACTGTAACTGAAAGAAAAAGGCACAGCTCTGCAGACACCCAAGAGAAGCTGGCATGTTTAATGTGGATGTAGAGGGTATAATGCCCATGGCAACTGATTGGAACACAACTGTCAGCAGCCTTAACACAGGCTAAGACTGGGTTAAGCCCCAGGAGATGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 68116 1051 - 87586 TTAAAATGCTTCTAATGTTTTAAAAGACAAAACTCCACCATGATATCACATTGAACATTAAAATTATTCCCACAGCAACACTTATTTCAGAGAAACAATTGAGAAGTCAGTTATCTTAGTCACCACTAAAGGCACCTGGTGAGAAAAGCCTGAACTAAATTTTAAATATTAAAAAATTAAAGAGACATCTAGTGCAGAGTTCAAACCTTTATGTTGAATTGTTTAAGAGTCATTACTGATTTCATGATGCTGATAAGTGT----TTGAGTTGAAATGATTTTTAAAAATGCAGAGAAAATGCTAACAGAATATTATATAGTTCCCCTAAAGATGCTTCTTCTAACCT-CCAAGTATTAAATAAGATTGATCTAAATGTTAAGTACATATAAAGTATATATTTGCTAGTCATCTATTAATTTTAAGTACAATTCCAGTGATATACCTGTATCTTTTGGAAGAGAAGAACTAAACCTGCCATTTCTTAGGCTAAGTAGACGATTCATAAGGTCCTTCCCTCCCCATTTATTCTGATTGCCAAGCTTTT-GTTCAGTAAGCTCTTGGCATCTAGTGATTAACCAGTGACAGCAGACAGTAGTGACCAAGAGAGATGGAGAGAACGATGGTGTAAGACAGTATATAAGGACAGTAAGCCACTGTATTTGTGGAACCACTGCATGTCAAAACTCCTTAACACTCTAACAAGGCATTTTTG--------AGATTAAGGACAGTCCTTACATAAGGGACTCAGTTTCAAACTAAAGTGCATCAAAAAGCAAATTATACTTCACAAACAACTTTAAAGAGGTAGCCACAAACCCAGTTGTTTTAGATTGGCCTTCTAAATGAAGTCAGCACATGGATCCATGT-------------------GTGAGTGTCATGGACGTCAGTGATTATGTAACTGTAACTGAAAGAAAAAGGCACAGCTCTGCAGACACCCAAGAGAAGCTGGCATGTTTAATGTGGATGTAGAAGGAATAATGTCCATGGCAACTGATTGGAACACAACTGTCAGCAGCCTCAACACAGGCTAAGACTGGGTTAAGCCCCAGGAGATGCA i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 54551 1080 + 80219 TTAAAATGCTTCCAATGTTTTAAAAGACAAAACTCCACCATGATATCACATTAAACATTAAAATTATTCACACAGCAACACTTATTTCAGAGAAACAATTGATAAGTCAGTTATGTTAGTAACTACTAAAGGCACCTGGTGAGAAAAGCATCCACTAAATTTTACATATT-AAAAACTAAAGAGACATCTAGTGCAGAGTTCAAACCTTTACGTTGAATTGTTAAAGAGTCATTAGTGATTTCATGACGCTGATAAGTGTTCAATCAAGTTGAAATGATTTTAAAAAATGCAGGGAAAATGCTAACAAAATACTATATAGTTCCCCTAAAGATGCTTCTTCTAACCTCCCAAGTATTAAATAAGACAGATCTAAATATTAAGTACATATGAAGTATATATTTGTTAGTCATCTATAAATTTTGAGTACAATTCCAGTGATATACCTTTATCTTTTGGAAGAGAAGAACTAAACCTACCATTTCTTGGGCTAAATGGACTATTCCTAAGGTCTTTCCCT-CCCATTTATTCTAATTGCCAAGTTTTTAATTCAGTAAGCTCTTGACACCTAGTGATTAACCAGTAACAGCAGAATTTAGTGACCAAGAGAGATGGAGAGAAT-ATGGTGTAAGACAGTATATAACGACAGTAAGCCACTGTATTTGTGGAACCACCGCATGTCAAAACTCCTTAATACTCTAACAAGGCATTTTTGGTCTTTA-AGATTAAGGACAGTCCTTACATAAGAGACTCAGTTTCAAACTAAAGTGCATCAAAAGGCAAATTATACTTCAGAAACAACTCTAAAGAGGTAGCCAAAAACCCAGTTGTTTTAGATTGGCCTTGTAAATGAAGTCAGCACATGGATCCACGTGTCATTACCCATGACACGGGTAAGTGTCATGGAGGTCAGTGATTATGTAACTGTAACTGAAAGAAAAAGGCACAGCTCTACAGATGCCCAAGAGAAGCCGGTATGTTTAATGTGGATGTAGAGGGGATAATGCCCATGACAACTGATTGGAACACAACTGTCAGCAGCCTTAACACAGGCTAAGACTGGGTTAAGCCCCAGGAGATGCA i rheMac8.chrUn_NW_014841389v1 I 28 C 0 e eulMac1.LGHX01003349v1 61346 1070 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 61893 1431 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=35827.000000 s hg38.chr9_KI270719v1_random 152547 30 + 176845 GAGAACGACTGAGGAAGCTGTGCTCTAAGG s panTro5.chr20 31530465 30 + 66533130 GAGAACGACTAAGGAAGCTGTGCTCTAAGC i panTro5.chr20 C 0 C 0 s panPan2.chr4 192183 30 - 195804263 GAGAACGACTAAGGAAGCTGTGCTCTAAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69167 30 - 87586 GAGAATGACTGAGGAAGCTGTGGTCTAAGG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 55631 30 + 80219 GAGAATGACTGAGGAAGCGGTGCTCTAAGG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s eulMac1.LGHX01003349v1 62416 30 + 138336 GAGAATGACTGAGGAAGCTGAGCTCTAAGG i eulMac1.LGHX01003349v1 I 1070 I 1470 e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 61893 1431 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=70403.000000 s hg38.chr9_KI270719v1_random 152577 78 + 176845 GGACATTACAGAAGGTAGCTTGGAGTGTGCTGTGTTTCCGAGAGCCTTTTAAGTTGGGTGGTTGAGTAAAGGAGGGTA s panTro5.chr20 31530495 78 + 66533130 GCACAGTACAGAAGGTAGCTTGGAGTGTGCTGTGTTTCCGAGAGCCTTTTAAGTTGGGTGGTTGAGTAAAGGAGGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr4 192213 78 - 195804263 GCACAGTACAGAAGGTAGCTTGGAGTGTGCTGTGTTTCCAAGAGCCTTTTAAGTTGGGTGGTTGAGTAAAGGAGGGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69197 78 - 87586 GCACAGTACAGAAGGTAGCTTGGAGTGTGCTGTGTTTCCGAGAGCCTTTTAAGTTGGGTGGTTGAGTAAAGGAGGGTG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 55661 78 + 80219 GCACAGTACAGAAGGTAGCTTGGAGTGTGCTGTGTTTCCAAGGGCCTTTTAAGTTGGGTGGTTGAGTAAAAGAGGGTG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 61893 1431 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=6710.000000 s hg38.chr9_KI270719v1_random 152655 5 + 176845 GAGGC s panTro5.chr20 31530573 5 + 66533130 GAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr4 192291 5 - 195804263 GAGGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69275 5 - 87586 GAGGC i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 55739 5 + 80219 GAGGC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s tarSyr2.KE943013v1 63324 5 - 280608 GAGGT i tarSyr2.KE943013v1 I 1431 I 282 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=120186.000000 s hg38.chr9_KI270719v1_random 152660 147 + 176845 AGGCTGTTCTACTTCCAATCCATGGATAAATCTCATTTTCTCAATGTAATACAGAGGCTGTTCTTCTATGATTGGCAAACACTATTTGTTCTTATCATGGAAACAGCATACTGCTATCAAGAAATAGGGAAAAGACAGTAAAAAAA-T- s panTro5.chr20 31530578 148 + 66533130 AGGCTGTTCTACTTCCAATCCATGGATAAATCTCATTTTCTTAATGTAATACAGAGGCTGTTCTTCTATGATTTGCAAACACTATTTGTTCTTATCATGGAAACAGCATACTGCTATCAAGAAATAGGGAAAAGACAGTAAAAAAAAT- i panTro5.chr20 C 0 C 0 s panPan2.chr4 192296 148 - 195804263 AGGCTGTTCTACTTCCAATCCATGGATAAATCTCATTTTCTTAATGTAATACAGAGGCTGTTCTTCTATGATTTGCAAACACTATTTGTTCTTATCATGGAAACAGCATACTGCTATCAAGAAATAGGGAAAAGACAGTAAAAAAAAT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69280 148 - 87586 AGGCTGTTCTACTCCCAATCCATGGATAAATCTCATTTTCTCAATGTAATACAGAGGCTGTTCTTCTATGATTGGCAAACACTATTTGTTCTTATCATGGAAACAGCATACTGCTATCAAGAAATAGGGAAAAGACAGTAAAAAAAAT- i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 55744 142 + 80219 AGGCTGTTCTACTTCCAATTCATGGAGAAATCTTATTTTCTCAGTGTAATACAGAGGCTG---TTCTATGATTTGTAAACACTA----TACTTATCATTGGAACAGCATACTGCTATCAAGAAATAGGGAAAAGACAGTAAAAAAAAAT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63329 282 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=181212.000000 s hg38.chr9_KI270719v1_random 152807 371 + 176845 GTGTGGAAAGAATATGGAATAAAAAATTTtattatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacgccacatgttctcactcataggtgggaattgaacaatgagaacacttggacacaggaaggcgaacatcacacaccagggcctgctgtgtggtggggggaggg-------atagcattaggagatatacctaatggaaatgacgaattagtgggtacagcaaaccaacatggcacatgtaaacaaatgcaacaaacctgcacattgtgcacatgtaccctagaactttaagtataataaaaaaa s panTro5.chr20 31530726 367 + 66533130 GTGTGGAAAGAATatggaata----------ccatgcagccataaaaaatgatgagttcatgtcctttgtagggacgtggatgaagctggaaaccatcattctcagcaaactattgcaaggacaaaaaaccaaacgccgtatgttctcactcataggtgggaattgaacaatgagaacacttggacacaggaaggcgaacatcacacaccggggcctgttgtagggtgcggggagggggtagggatagcattaggagatatacctaatgtaaatgaccagttaatgggtgcagcaaaccaacatggcacatgtatacatatgtaacaaacctgcacattgtgcacatgtaccgtagaacttacagtataataaaaaa- i panTro5.chr20 C 0 C 0 s panPan2.chr4 192444 367 - 195804263 GTGTGGAAAGAATatggaata----------ccatgcagccataaaaaatgatgagttcatgtcctttgtagggacgtggatgaagctggaaaccatcattctcagcaaactattgcaaggacaaaaaaccaaacgccgtatgttctcactcataggtgggaattgaacaatgagaacacttggacacaggaaggcgaacatcacacaccggggcctgttgtagggtgcgtggagggggtagggatagcattaggagatatacctaatgtaaatgaccagttaatgggtgcagcaaaccaacatggcacatgtatacatatgtaacaaacctgcacattgtgcacatgtaccgtagaacttacagtataataaaaaa- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69428 364 - 87586 GTGTGGAAAGAATatggaata----------ccatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaggac-aaaaaccaaacgccgcatgttctcactcataggtgggaattgaacaatgagaacacttggacacaggaaggcgaacatcacacaccagggccttctgtgtggtgggggaggggg--agggatagcattagg-gatatacctaatggaaatgacgagttagtgggtgcagcaaaccaacatggcacatgtatacatatgcaacaaacctgcacattgtgcacatgtaccctagaactttaagtataataaaaaaa i gorGor5.CYUI01000881v1 C 0 C 0 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63329 282 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e rheMac8.chrUn_NW_014841389v1 55886 0 + 80219 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=44641.000000 s hg38.chr9_KI270719v1_random 153178 59 + 176845 GTGTGGAAAGAATAAT-ATGGGTTTCTAACTGAATGCTTGCTTTTGAAGAGCCCAAAAAC s panTro5.chr20 31531093 59 + 66533130 CTGTGGAAAGAATAAT-ATGGGTTTCTAACTGAATGCTTGCTTTTGAAGAGCCCAAAAAC i panTro5.chr20 C 0 C 0 s panPan2.chr4 192811 59 - 195804263 CTGTGGAAAGAATAAT-ATGGGTTTCTAACTGAATGCTTGCTTTTGAAGAGCCCAAAAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69792 55 - 87586 GTGTGGAAAGAATAAT-ATGGGTTTCTAACTGAATGCTTGCTTTTGAAGAGCCCAA---- i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 55886 55 + 80219 GTGTGGAAAGAATAATAATGGGTTTCTAACTGAATGCTTGCTTTTGAAGAGCCAG----- i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63329 282 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=2730.000000 s hg38.chr9_KI270719v1_random 153237 2 + 176845 AA s panTro5.chr20 31531152 2 + 66533130 AA i panTro5.chr20 C 0 C 0 s panPan2.chr4 192870 2 - 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69847 2 - 87586 AA i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 55941 2 + 80219 AA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s rhiRox1.KN299842v1 764871 2 + 1006759 aa i rhiRox1.KN299842v1 N 0 N 0 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63329 282 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=79699.000000 s hg38.chr9_KI270719v1_random 153239 97 + 176845 ACAAACAAAAAATTCTAAGAGCAGCAAACATCTACGCCTGTTATGTTACTGAATTATTCTTTTTTAAAATCCTTATTTCATAGGAGAGATATTTACA s panTro5.chr20 31531154 97 + 66533130 ACAAACAAAAAATTCTAAGAACAGCAAACATGTATGTCTGTTATATTATTGAATTACTCTTTTTTAAAATCCTTATTTCATAGGAGAGATATTTACA i panTro5.chr20 C 0 C 0 s panPan2.chr4 192872 97 - 195804263 ACAAACAAAAAATTCTAAGAACAGCAAACATCTATGTCTGTTATATTATTGAATTACTCTTTTTTAAAATCCTTATTTCATAGGAGAGATATTTACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69849 97 - 87586 ACAAACAAAAAATTCTAAGAGCAGCAAACATCTATGTCTGTTATATTACTGAATTACTCTTTTTTAAAATCCTTATTTCATAGGAGAGATATTTATA i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 55943 97 + 80219 ACAAACAAAAAATCCTAAGAGCAGCAAACATCTTCCTCTGTTATATTAGTGAATTACTCTTTTTTTTGATTCTTATTTCATAGGAGAGATATTTACA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63329 282 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=1365.000000 s hg38.chr9_KI270719v1_random 153336 1 + 176845 A s panTro5.chr20 31531251 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr4 192969 1 - 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69946 1 - 87586 A i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 56040 1 + 80219 A i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s tarSyr2.KE943013v1 63611 1 - 280608 A i tarSyr2.KE943013v1 I 282 I 83 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=51327.000000 s hg38.chr9_KI270719v1_random 153337 60 + 176845 TTTTGAATTACAAAGTTTGAAAAACGTTGAAAATAACCTGAAAGGGGAAAGTTGACCTAA s panTro5.chr20 31531252 60 + 66533130 TTTTGAATTACAACGTTTGAAAACCATTGACAATAACCTGAAAGGGGAAAGTTGACCTAA i panTro5.chr20 C 0 C 0 s panPan2.chr4 192970 60 - 195804263 TTTTGAATTACAACGTTTGAAAACCATTGACAATAACCTGAAAGGGGAAAGTTGACCTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 69947 60 - 87586 TTTTGAATTACAACGTTTGAAAAACGTTGAAAATAACCTGAAAGGGGAAAGTTGACCTAA i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 56041 60 + 80219 TTTTGAATTACAATGTTTGAAAAACGTTGAAAATAACCTGAAAGGGGAAAGTTGACCTAG i rheMac8.chrUn_NW_014841389v1 C 0 I 1299 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63612 83 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=19357.000000 s hg38.chr9_KI270719v1_random 153397 23 + 176845 GCCATTTTATTCTCTTAAAAAAA s panTro5.chr20 31531312 23 + 66533130 GCCATTTTATTCTCTTAAAAAAC i panTro5.chr20 C 0 C 0 s panPan2.chr4 193030 23 - 195804263 GCCATTTTATTCTCTTAAAAACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 70007 23 - 87586 GCCATTTTATTCTCTTAAAAAAC i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 57400 23 + 80219 GCCATTTTATTCTCTTAAAAAAA i rheMac8.chrUn_NW_014841389v1 I 1299 C 0 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63612 83 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=-950.000000 s hg38.chr9_KI270719v1_random 153420 2 + 176845 ----------CC--- s panTro5.chr20 31531335 2 + 66533130 ----------CC--- i panTro5.chr20 C 0 C 0 s panPan2.chr4 193053 2 - 195804263 ----------CC--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 70030 2 - 87586 ----------CC--- i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 57423 2 + 80219 ----------CC--- i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s tarSyr2.KE943013v1 63695 15 - 280608 CAAACAAAAACCTGT i tarSyr2.KE943013v1 I 83 I 90 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=76387.000000 s hg38.chr9_KI270719v1_random 153422 90 + 176845 CAAACTTTTGTATAATAGTAATCCCTGAACTGAGTATTTTTGAAGGTTTTTCAGATAATCTGATGTGCGAGGTTAGTTTGTTTTACTATT s panTro5.chr20 31531337 90 + 66533130 CAAACTTTTGTATAATAGTAATCCCTGAACTGATTATTTTTGAAGGTTTTTCAGATAATCTGATGTGCGAGTTTAGTTTGTTTTACTATT i panTro5.chr20 C 0 C 0 s panPan2.chr4 193055 90 - 195804263 CAAACTTTTGTATAATAGTAATCCCTGAACTGATTATTTTTGAAGGTTTTTCAGATAATCTGATGTGCGAGTTTAGTTTGTTTTACTATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 70032 89 - 87586 CAAACTTTTGTATAATAGTAATCCCTGAACTGAGTATTTTTGAAGGTTTTTCAGATAATCTGATGTGC-AGGTTAGTTTGTTTTACTATT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 57425 90 + 80219 CAAACTTTTATATAATAGTAATCCCTGAACTGATTATTTTTGAAGGCTTTTCAGGTGATCTGATGTGCAAGTTGAGTTTGTTTTACTATT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63710 90 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=294.000000 s hg38.chr9_KI270719v1_random 153512 1 + 176845 C s panTro5.chr20 31531427 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr4 193145 1 - 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 70121 1 - 87586 C i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 57515 1 + 80219 T i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s tarSyr2.KE943013v1 63800 1 - 280608 C i tarSyr2.KE943013v1 I 90 n 90 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=627718.000000 s hg38.chr9_KI270719v1_random 153513 738 + 176845 AGTTGTTTGGAATAGTAGAGCATTATATGAGGCTCTTACTGGAGGCTTAATGGTATTAAGAGATTAAAAGCTTTCACATTGTTTGGTTTTCACATCTATAAATAAAACAAGTTATTATCATTTTGTAATATTTAGCTTATATACATTTTTGTGAGAGTTTTGTGGGACTTGGAAAGTG-TATGGACTAGCATCAGACACAAATTATTTTTCCATATTTCTCACTTGGAGTTTCAGATAGCAGCATTTTAATCATCTCTTCCATTAAACCAAGATTACACAAAAGCGTTTGAGGACACTGAGGACTGGCACTTCTAATTTTGCTTCAGAAACCAGTACTCAAAATGTCTGGTTTGGAGGTCAGTTACACTGCTGTCTTTGTATAATCAGCCATTAAAAAATATTTTGGGGACATTTCTCAGAAGTCTCATCCCCATATTTTTGTTCTTAACACATCTCACCACAAACTCTACCACACCTATGGTTTGCAAACTTTGGGAAATGTCAGTATATGCCATTATCATGGTTATTAGTACTATTATTTGTTAAAAGCACTTTGAAGGCAA-TTTATGTGACT--TATATATAGTTAGTATTTTAATCTGGACATTCTCCAGTTATATGCAAAGATTAAAACTCAGCAGCTTCATTTTACAGAATTGGCATCTTTTATATGGCTATGGGGACTGCTTGGTGTCTATAAATTATAATGTATATTTGTTGGACTGAAATCAAACTTAAAAT s panTro5.chr20 31531428 738 + 66533130 AGTTGTTTGGAATAGTAGAGCATTATATGACTCTCTTACTGGAGGGTTAATGGCATTAAGAGATTAAAAGCTTTCACATTGTTTGGTTTTTACATCTATAAATAAAACAAATTGTTATCATTTTCTAATATTTAGCTTATATACATTTTTGTGAAAGTTTTGTGGGACTTGGAAAGCG-TATGGATTAGCATCAGAAACAAATTATTTTTCCATTTTTCTCACTTGGAGTTTCAGATAGCAGCATTTTAATCATCTCTTCCATTAAACCAAGATTACACAAAAGCATTTGAGGACACTGAGGACTGGCACTTCTAATTTTGCTTCAGAAACCATTACTCAAAATGTCTGGTTTGGAGGTCAGTTACACTGCTGTCTTTGTATAATCAGCCATTAAAAAATATTTTGGGGACATTTCTCAGAAGTCTCATCCCCATACTTTTGTTCTTAACACATCTCACCACAAACTCTACCACACCTATGGTTTGCAAACTTTGGGAAATGTCAGTATATGCCATTATCATGGTTATTAGTACTATTATTTGTTAAAAGCCCTTTGAAGACAA-TTTATGTGACT--TATATATAGTTAGTATTTTAATTTGGACATTCTCCAGTTATATGCAAAGATTAAAACTCAGCGGCTTCATTTTATAGAATTGGCATCTTTTATATGGCTATGGGGACTGCTTGGTGTCTATAAATTATTATGTATATTTGTTGGACTGAAATCAAACTTAAAAT i panTro5.chr20 C 0 C 0 s panPan2.chr4 193146 738 - 195804263 AGTTGTTTGGAATAGTAGAGCATTATATGACTCTCTTACTGGAGGGTTAATGGCATTAAGAGATTAAAAGCTTTCACATTGTTTGGTTTTTACATCTATAAATAAAACAAGTTGTTATCATTTTCTAATATTTAGCTTATATACATTTTTGTGAAAGTTTTGTGGGACTTGGAAAGCG-TATGGATTAGCATCAGAAACAAATTATTTTTCCATTTTTCTCACTTGGAGTTTCAGATAGCAGCATTTTAATCATCTCTTCCATTAAACCAAGATTACACAAAAGCATTTGAGGACACTGAGGACTGGCACTTCTAATTTTGCTTCAGAAACCATTACTCAAAATGTCTGGTCTGGAGGTCAGTTACACTGCTGTCTTTGTATAATCAGCCATTAAAAAATATTTTGGGGACATTTCTCAGAAGTCTCATCCCCATATTTTTGTTCTTAACACATCTCACCACAAACTCTACCACACCTATGGTTTGCAAACTTTGGGAAATGTCAGTATATGCCATTATCATGGTTATTAGTACTATTATTTGTTAAAAGCCCTTTGAAGGCAA-TTTATGTGACT--TATATATAGTTAGTATTTTAATTTGGACATTCTCCAGTTATATGCAAAGATTAAAACTCAGCGGCTTCATTTTATAGAATTGGCATCTTTTATATGGCTATGGGGACTGCTTGGTGTCTATAAATTATTATGTATATTTGTTGGACTGAAATCAAACTTAAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 70122 736 - 87586 AGTTGTTTGGAATAGTAGAGCATTATATGACGCTCTTACTGGAGGGTTAATGGCATTAAGAGATTAAAAGCTTTCACATTGTTTGGTTTTTACATCTATAAATAAAACAAGTTGTTATCATTTTCTAATATTTAGCTTATATACAGTTTTGTGAGAGTTTTGTGGGACTTGGAAAGTG-TATGGACTAGCATCAGACACAAATTATTTTTCCATCTTTCTCACTTGGAGTTTCAGATAGCAGCATTTTAATCATCTCTTCCATTAAACCAAGATTACACAAAAGC-TTTGAGGACACTGAGGACTGGCACTTCTAATTTTGCTTCAG-AACCAGTACTCAAAATGTCTGGTTTGGAGGTCAGTAACACTGCTGTCTTTGTATAATCAGCCATTAAAAAATATTTTGGGGACATTTCTCAGAAGTCTCATCCCCATATTTTTGTTCTTAACACATCTCACCACAAACTCTACCACACCTATGGTTTGCAAACTTTGGGAAATGTCAGTATATGCCATTATCATGGTTATTAGTACTATTATTTGTTAAAAGCCCTTTGAAGGCAA-TTTATGTGACT--TATATATAGTTAGTATTTTAATTTGGACATTCTCCAGTTATATGCAAAGATTAAAACTCGGCAGCTTCATTTTATAGAATTGGCATCTTTTATATGGCTATGGGGACTGCTTGGTGTCTATAAATTATTATGTATATTTGTTGGACTGAAATCAAACTTAAAAT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 57516 721 + 80219 AGTTCTTTGGAATAGTAGAGCATTATATGATGCTCTTACTGGAGGCTTAATGGGATTAAGAGATTAAAAGCTTTCACATTGTTTGGTTTTTACATCTATAAATAAAACAAGTTGATATCATTTTCTAATATTTAGC-TATACACATTTTTGTGAAAATTCTGTGGGACTTGGAAAGTGTTATGGATTAGCATAAGAAACAAAATATTTTTCCATCTTTCTCACTTGGAATTTCACATAGCAGCATTTTAATCATCTCTTCCATTAAACCAAGATTACACAAAAGCATTTGAGGACATTGAGGACTGGCACTTCTAATTTTGCTTCAGAAACCAGTACTCTAAATATCGGGTTTGGAGGTCAGTTACATCACTGTCTTTGTATAATCAGTCATTAAAAAATATTTTGGGGACATTTCTCAGAAGTCTCATCCCCGTATTTTTGTTCTTAACACATCTCACCACAAACTCAACCACACCTATGGTTTGCAAACTTTGGGAAATG-------------------TGGTTATTAGTACTATTATTTGTTAAAAACCCTTTGAAGACAATTTTATGTGACTTATATATATAGTTAGTATTTTAATTTGGATATTCTCCAGTTATGTGCAAAGATTAAAACTAGGCAGTGTCACTTTATATAACTGGCACCTTTTATATGGCTATGGGGACTGCTTGGTGTCTAT-AATTATTATGTATATTTGTTGGACTGAAATCAAACTTAAAGT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulMac1.LGHX01003349v1 62446 1470 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=-4409.000000 s hg38.chr9_KI270719v1_random 154251 1 + 176845 -G s panTro5.chr20 31532166 1 + 66533130 -C i panTro5.chr20 C 0 C 0 s panPan2.chr4 193884 1 - 195804263 -C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 70858 1 - 87586 -C i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 58237 1 + 80219 -C i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s eulMac1.LGHX01003349v1 63916 1 + 138336 A- i eulMac1.LGHX01003349v1 I 1470 I 179 s eulFla1.LGHW01003386v1 65358 1 + 140361 A- i eulFla1.LGHW01003386v1 N 0 I 179 e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=150642.000000 s hg38.chr9_KI270719v1_random 154252 188 + 176845 TTCCACATTTCAAGTGTTTTTATTCTGAGCAGTACTTACAAAAAA-TAATGCCATAGTTGTGTCTAATTCTGTATAGTTCAGCACTCTCCACAGGCTGTCAATCTCTGATTTGATCTACTTTTACCAGATTTAACAGATCCTTGAATTTACTTTACTGTCTACGCTTCCTTTTTGCTCACATTGGGAAT s panTro5.chr20 31532167 189 + 66533130 TTCCATATTTCATGTGTTTTTATTCTGAGCAGTAGGTACAAAAAAATAATGCCATAGTTGTGTCTAATTCTGTATAGTTCAGCACCCTCCACAGGCTGTCAATCTCTGATTTGATCGACTTTTACCAGGTTTAACAGATCCTCGAATTTACTTTACTGTCTATACTTCCTTCTTGCTCACATTGCGAAT i panTro5.chr20 C 0 C 0 s panPan2.chr4 193885 189 - 195804263 TTCCATATTTCATGTGTTTTTATTCTGAGCAGTAGGTACAAAAAAATAATGCCATAGTTGTGTCTAATTCTGTATAGTTGAGCACCCTCCACAGGCTGTCAATCTCTGATTTGATCGACTTTTACCAGGTTTAACAGATCCTCGAATTTACTTTACTGTCTATACTTCCTTCTTGCTCACATTGGGAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 70859 187 - 87586 TTCCACATTTCAAGTGTTTTTATTCTGAGCAGTA-GTACAAAAAA-TAATGCCATAGTTGTGTCTAATTCTGTATAGTTCAGCACCCTCCACAGGCTGTCAATCTCTGATTTGATCTACTTTTACCAGATTTAACAGATCCTTGAATTTACTTTACTGTCTATACTTCCTTTTTGCTCACATTGGGAAT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 58238 187 + 80219 TTCCATATTTCAAGTGTTTCTGTTGTAAGCAGTAGGTACAGAAAA-TAATGACATAGTTGTGTCTAATTCTGTATAGTTCAGCACCCTCCACA-GCTGTCAGTCTCTGATTTGATCTACCTTTACCAGACTGAACAGATCCTTGAATTTACTTTTGTGTATATCCTTCCTTCTTGCTCACATTGGGAAT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulFla1.LGHW01003386v1 65359 179 + 140361 I e eulMac1.LGHX01003349v1 63917 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=2611.000000 s hg38.chr9_KI270719v1_random 154440 2 + 176845 CA s panTro5.chr20 31532356 2 + 66533130 CA i panTro5.chr20 C 0 C 0 s panPan2.chr4 194074 2 - 195804263 CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 71046 2 - 87586 CA i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 58425 2 + 80219 CA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s eulMac1.LGHX01003349v1 64096 1 + 138336 -A i eulMac1.LGHX01003349v1 I 179 n 179 s eulFla1.LGHW01003386v1 65538 1 + 140361 -A i eulFla1.LGHW01003386v1 I 179 N 0 e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=230660.000000 s hg38.chr9_KI270719v1_random 154442 276 + 176845 CACT--------AAACATGCATCT----ACTTCATTGAGGAACTCCAGATTGAGACATGCTGGGATTGACTCCATGGTTAGGGAAGATGGATAAAATGGAAACAAAACAGGAAACATGTGCTTGGCATCTAATAGCAGTTGCTGAGGGTCATTCTGCTCTTGTAGTTGTGCCTGGATCGTTTGTATAAAGGCCACTGTTACCTGTTCTTCAAATTCATTCAGGGGAGGCTAAAGG-TTTAAAATTTGGACAATCTGCTGGGTGCTGAGAGAGGCACACAGGGAGCAGAT s panTro5.chr20 31532358 276 + 66533130 GACT--------AAACATGCATCT----ACTTCATTGAGGAACTCCAGATTGAGACATGCTGGGATTGACTCCATGGTTAGGGAAGATGGATAAAATGGAAACAAAACAGGAAACATGTGCTTGACATCTAATAGCAGTTGCTGAGGGTCATTCTGCTCTTGTAGTTGTGCCTGGATCGTTTGTATAAAGGCCACTGTTACCTTTTCTTCAAATTCATTCAGGGGAGGCTAAAGC-TTTAAAATTTTGACAATCTGCTGGGTGCTGAGAGAGGTACACAGGGAGCAGAT i panTro5.chr20 C 0 C 0 s panPan2.chr4 194076 276 - 195804263 GACT--------AAACATGCATCT----ACTTCATTGAGGAACTCCAGATTGAGACATGCTGGGATTGACTCCATGGTTAGGGAAGATGGATAAAATGGAAACAAAACAGGAAACATGTGCTTGACATCTAATAGCAGTTGCTGAGGGTCATTCTGCTCTTGTAGTTGTGCCTGGATCGTTTGTATAAAGGCCACTGTTACCTTTTCTTCAAATTCATTCAGGGGAGGCTAAAGG-TTTAAAATTTTGACAATCTGCTGGGTGCTGAGAGAGGTACACAGGGAGCAGAT i panPan2.chr4 C 0 I 30663 s gorGor5.CYUI01000881v1 71048 275 - 87586 GACT--------AAACATGCATCT----ACTTCACTGAGGAACTCCAGATTGAGACATGCTGGGATTGACTCCATGGTTAGGGAAGATGGATGAAATGGAAACAAAACAGGAAACATTTGCTTGGCATCTAATAGCAGTTGCTGAGGGTCATTCTGCTCTTGTAGTTGTGCCTGGATCGTTTGTATAAAGGCC-CTGTTACCTGTTCTTCAAATTCATTCAGGGGAGGCTAAAGG-TTTAAAATTTTGACAATCTGCTGGGTGCTGAGAGAGGCACACAGGCAGCAGAT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 58427 289 + 80219 GACTAATGCTGGAAAGATGCATCTTCAGACTTTATTGAGGAACTCCAGATTGAGACACGCTGGGATTGAGTCCGTGGTTAGAGAAGATGGATTAAATAGAAACAAAACAGGAAACATGTGCTTGGCATCTAATAGCAGTTGCTGAGGGTGATTCCACTCTTGTAGTTGTGCCTGGATCGTTGGTATAAAGGCCGCTCTTACCCGTTCTTCAGATTCATTCAGGGGAGGATAAAAGTTTTAACATTTTGACAGTCTACTGGGTGCTGAGGGAGGTACACATGGAGCAGAT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=861343.000000 s hg38.chr9_KI270719v1_random 154718 995 + 176845 GGCCTCTGCATCCTCCTGGGTTTTCTTCTTTAATTGCAGGAGCTGGGCTGCTTCGATCAGAGGTTCCATGGTCTGAACTACTCCACTCTGGTGAAGGTTTCTTCCCCAAAGCCACTCCTCAAGCTGACTTATATTGTACCTGAGTTGCATGCCTGTGCTCCAAGAGCAGACGTCCTTCCGCAGGAGCAGGTCATTAAGAGTCACTGCGTTGATCATGTAGAAGAGCTGTTTGAATACCTACAGGATGATCTCAGGGTCCAAGCCCTGGTCACACATGACTGTATGAAAGGCATTCATCTGGCGGATGATAGCTTCCAGGCGGTATGAGTTATCCTCATCTGCCATGCTGGAGGAGTGCTTCTGGGAGCCAGTGGGCTTCACACCAGATAGACCCTGAATGCTCTAATTTTCCAACATGGCAGAAACTATCATCGGCTGTAACACACCCTCGGCAA-TTTTAAAGAGGTGCTGGTAGATCTGAATGGAAAGGTCGCTCAGTACCTGACGGTATTCGGTGAGGTCAAAGTTCTTAAGGCAGTGTTCGTTGTGCTTTGCAGTATTCTGAGTCATGAAGCCCTCATCCCCGCTGTACCGCTTCAGACAGTGAAGAAGGTGGCAGGTGTTGGATAACAAGAATGACGTCATCTCAAAGTCATCACTGTGCTTCTTCAGGACTTCCTTAATGCCGTTGGTGGTGGAGGTCATCAGGGAGTGCACCTTGAGATCATCATTGGTTTGGTCCGCGAGCCGGATGCACATGTAGAGGATGTAGGCGGGGATACAGGGCACTGTGTCCAACAGCATCTGGGGCTTCAAGTCTGTCACCAGGTTGAGGATGAGGAGGGCCTCGCCCTCTTTGTGGCACTTCAACATGCCCTGGAAATCCTTTTCTTTCCACTGAACTGTGACCTGCCTGTTGAACTCATGGCACTTCCTGTCACTCTGGGCCAACGCCTGGGCAGC----------------TTCTTCACGTAAATCTTCAGTTGCTTTTAGAG s panTro5.chr20 31532634 995 + 66533130 GGCCTCTGCATCCTCCTGGGTTTTCTTCTTTAATTGCAGGAGCTGGGCTGCTTGGATCAGAGGTTCCATGGTCTGAACTACTCCACTCTGGTGAAGGTTTCTTCCCCAAAGCCACTCCTCAAGCTGACTTATATTGTACCTGAGTTGCATGCCTGTGCTCCAAGAGCGGGCGTCCTTCCGCAGGAGCAGGTTGTTAAGAGTCACTGCGTTGATCATGTAGAAGAGCTGTTTGAATACCTGCAGGATGATCTCAGGGTCCAAGCCCTGGTCACACATGACTGTATGAAAGGCATTCATCTGGCGGATGATAGCTTCCAGATGGTATGAGTTATCCCCATCTCCCATGCTGGAGGAGTGCTTCTGGGAGCCAGTGGGCTTCACACCAGATAGACCCTGAATGCTCTCATTTTCCAACATGGCAGAAACTATCATCAGCTGTAACACACCCTCGGCAA-TTTTAAAGAGCTGCTGGTAGATCGCAATGGAAAGGTCACTCAGTACCTGACAGTATTCGGTGAGGTCAAAGTTCTTAAGGCAGTGTTCGTTGTGCTTTGCAGTATTCTGAGTCATGAAGCCCTCATCCCCGCTGTACGGCTTCAGACAGTGAAGAAGGTGGCAGGTGTTGGATAACAAGAATGACGTCATCTCAAAGTCATCACTGTGCTTCTTCAGGACTTTCTTAGTGCCGTTGGTGGTGGAGGTCATCAGGGAGTGCAACTTGAGATCATCGTTGGTGTGGTCCGCGAGCCAGATGCACATGTAGAGGATGTAGGCGGGGAGACAAGGCACTGTGTCCAACAGCATATGGGGCTTCAAGTCTGTCACCAGGTTGAGGATGAGGAGGGCCTCGCCCTCTTTGTGGCACTCCAACATGCCTTGGAAATCCTTTTCTTTCCACTGAACTGTGACCTGCCTGTTGAACTCATGGCGCTTCCTCTCACTCTGGGCCAACGCCGGGGCAGC----------------TTCTTCATGTAAATCTTCAGTTGCTTTTAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 225015 995 - 195804263 ggcctctgCATCCTCCTGGGTTTTCTTCTTTAATTGCAGGAGCTGGGCTGCTTGGATCAGAGGTTCCATGGTCTGAACTACTCCACTCTGGTGAAGGTTTCTTCCCCAAAGCCACTCCTCAAGCTGACTTATATTGTACCTGAGTTGCATGCCTGTGCTCCAAGAGCAGACGTCCTTCCGCAGGAGCAGGTCATTAAGAGTCACTGCGCTGATCATGTAGAAGAGCTGTTTGAATACCTGCAGGATGATCTCAGGGTCCAAGCCCTGGTCACACATGACTGTATGAAAGGCATTCATCTGGCAGATGATAGCTTCCAGGCGGTATGAGTTATCCCCATCTGCCATGCTGGAGGAGTGCTTCTGGGAGCCAGTGGGCTTCACACCAGATAGACCCTGAATGCTCTCATTTTCCAACATGGCAGAAACTATCATCAGCTGTAACACACCCTCGGCAATTTTTAAAGAGCTGCTGGTAGATCGCAATGGAAAGGTCACTCAGTACCTGACAGTATTCGGTGAGGTCAAAGTTCTTAAGGCAGTGTTCGTTGTGCTTTGCAGTATTCTGAGTCATGAAGCCCTCATCCCCGCTGTACCGCTTCAGACAGTGAAGAAGGTGGCAGGTGTTGGATAACAGGAATGACGTCATCTCAAAGTCATCACTGTGCTTCTTCAGGACTTTCTTAGTGCCGTTGGTGGTGGAGGTCATCAGGGAGTGCACCTTGAGATCATCGTTGGTTTGGTCCGCGAGCCAGATGCACATGTAGAGGATGTAGGC-GGGAGACAAGGCACTGTGTCCAACAGCATATGGGGCTTCAAGTCTGTCACCAGGTTGAGGATGAGGAGGGCCTCGCCCTCTTTGTGGCACTCCAACATGCCTTGGAAATCCTTTTCTTTCCACTGAACTGTGACCTGCCTGTTGAACTCATGGCGCTTCCTCTCACTCTGGGCCAACGCCGGGGCAGC----------------TTCTTCATGTAAATCTTCAGTTGCTTTTAGAG i panPan2.chr4 I 30663 C 0 s gorGor5.CYUI01000881v1 71323 993 - 87586 GGCCTCTGCATCCTCCTGGGTTTTCTTCTTTAATTGCAGGAGCTGGGCTGCTTGGATCAGAGGTTCCATGGTCTGAACTACTCCACTCCGGTGAAGGTTTCTTCCCCAAAGCCACTCCTCAAGCTCACTTATATTGTACCTGAGTTGCATGCCTGTGCTCCAAGAGCAGACGTCCTTCTGCAGGAGCAGGTCATTAAGAGTCACTGCGTTGATCATGTAGAAGAGCTGTTTGAATACCTGCAGGATGATCTCAGGGTCCAAGCCCTGGTCACACGTGACTGTATGAAAGGCATTCATCTGGCGGATGATAGCTTCCAGGCGGTATGAGTTATCC-CATCTGCCATGCTGCAGGAGTGCTTCTGGGAGCCAGTGGGCTTCACACCAGATAGACCCTGAATGCTCTCATTTTCCAACATGGCAGAAACTATCATCGGCTGTAACACACCCTCGGCAA-TTTTAAAGAGCTGCTGGTAGATCTGAATGGAAAGGTCGCTCAGTACCTGACGGTATTCGGTGAGGTCAAAGTTCTTAAGGCAGTGTTCGTTGTGCTTTGCAGTATTCTGAGTCATGAAGCCCTCATCCCCGCTGTACGGCTTCAGACAGTGAAGAAGGTGGCAGGTGTTGGATAACAAGAATGACGTCATCTCAAAGTCATCACTGTGCTTCTTCAGGACTTTCTTAATGCCGTTGGTGGTGGAGGTCATCAGGGAGTGCACCTTGAGATCATCGTTGGTTTGGTCCGCGAGCCGGATGCACATGTAGAGGATGTAGGCGGGGAGACAGGGCACTGTGTCCAACAGCATCTGGGGCTTCAAGTCTGTCACCAGGTTGAGGATGAGGAGGGCCTCGCCCTCTTTGTGGCACTCCAACATGCCCTGGAAATCCTTTTCTTTCCACTGAACTGTGACCTGCCTGTTGAACTCATGGCGCTTCCTCTCACTCTGGGCCAACGCCT-GGCAGC----------------TTCTTCATGTAAATCTTCAGTTGCTTTTAGAG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 58716 1001 + 80219 GGCCTCTGCATCCTCCTGAGTTTTCTTCTTTAATTGCAGGTGCTGGGCTGTTTGGATCAGAGGTTCCACAGTCTGAACTACTCCACTCT------GGCTTCTTCCCCGAAGCCAGTCCCCAAGCTGACTTATATTGTACCTGAGTTGCACGTCTGTGCTCCAAGAGCAGAGGTCCTTCCACAGGAGCAGGTTGTTAAGAGTCACTGCATTGATCATGTAGAAGAGCTGTTTGAACACCTGCAGGATGATCGCAGGGTCCAAGCCCTGGTCACACATGACTGTGTGAAAGGCATTCGTCTGGCAGATGATAGCTTCCAGGCGGTATGAGTTATCCCCACCTGCCATGCTGGAGGAGCGCTTCCCGTAGCCAGTGGGCTTCACACCAGATAGACCCTGAATGCTCTCATTTTCCAACATGGCAGAAAGTGTCATCGGCTGCAACACACCCTCGGCAA-TTTTAATGAGCTGCTGGTAGATCTGAATGGAAAGGTCACACAGCACCTGACGGTGTTCGGCGAGGTCGAAGTTCTTAAGGCAGTGTTC----TGCTTTGCAGTGTTCTGAGTCATGAAGCCCTCATCCCTGCTGTACTGCTTCAGACGGTGAACAAGGCGGCAGGTGTTGGATAACAAGAATGACGTCATCTCAAAGTCATCTTTGTGCTTCTTCAGGACTTTCTTAATGCTGTTGATGGTGGAGGTCATCAGGGAGTGCACCTTGGGATCGTCGTTGGTGTAGTCCGCGTGTCAGATGCACATGTAGAGGATGTAGGCGGGGAGACAGGGCACTGCTCCTGACAGCATCTTGGGCTTCAAGTCTGTCACCAGGTTCCAGATGAGGAGGGCCTCGCCCTCTTTGTGGTACTCCAACATGCCCTGGAAATCCTTCTCTTTCTGCTGGACTGTGACCTGCCTGTTGAGCTCATGGCGCTTCCTCTCACTCTGGGCCAAGGCCTGGGCAGCTTCTAGGTCATGCGATTTCTTCATGTAAACCTTCAGTTACTTTTAGAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e macFas5.chr5 144537518 0 - 189454096 C e nomLeu3.chr20 42643523 0 + 85365473 C a score=7940.000000 s hg38.chr9_KI270719v1_random 155713 6 + 176845 cttcct s panTro5.chr20 31533629 6 + 66533130 cttcct i panTro5.chr20 C 0 C 0 s panPan2.chr4 226010 6 - 195804263 cttcct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72316 6 - 87586 cttcct i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 59717 6 + 80219 ctttct i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537518 6 - 189454096 cttcct i macFas5.chr5 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e saiBol1.JH378162 14656710 2796 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=6633.000000 s hg38.chr9_KI270719v1_random 155719 5 + 176845 ctcat s panTro5.chr20 31533635 5 + 66533130 ctcat i panTro5.chr20 C 0 C 0 s panPan2.chr4 226016 5 - 195804263 ctcat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72322 5 - 87586 ctcat i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 59723 5 + 80219 ctcat i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537524 5 - 189454096 tgctt i macFas5.chr5 C 0 C 0 s saiBol1.JH378162 14659506 5 + 15139346 ctcat i saiBol1.JH378162 I 2796 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21789566 1192 - 63241923 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=7273.000000 s hg38.chr9_KI270719v1_random 155724 9 + 176845 ----tcttttcct s panTro5.chr20 31533640 9 + 66533130 ----tcttttcct i panTro5.chr20 C 0 C 0 s panPan2.chr4 226021 9 - 195804263 ----tcttttcct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72327 9 - 87586 ----tcttttcct i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 59728 9 + 80219 ----tcttttcct i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537529 9 - 189454096 ----tattttatt i macFas5.chr5 C 0 C 0 s saiBol1.JH378162 14659511 8 + 15139346 ----tattcttc- i saiBol1.JH378162 C 0 C 0 s canFam3.chr13 21790758 9 - 63241923 tccctcttt---- i canFam3.chr13 I 1192 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e aotNan1.NW_018493494v1 9850304 6022 + 11631747 I e cebCap1.NW_016107603v1 488487 5753 + 3802414 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=3026.000000 s hg38.chr9_KI270719v1_random 155733 4 + 176845 ctta s panTro5.chr20 31533649 4 + 66533130 ctga i panTro5.chr20 C 0 C 0 s panPan2.chr4 226030 4 - 195804263 ctga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72336 3 - 87586 ct-a i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 59737 4 + 80219 ctca i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537538 4 - 189454096 tttt i macFas5.chr5 C 0 C 0 s saiBol1.JH378162 14659519 4 + 15139346 cttg i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494240 4 + 3802414 cttg i cebCap1.NW_016107603v1 I 5753 C 0 s aotNan1.NW_018493494v1 9856326 4 + 11631747 cttg i aotNan1.NW_018493494v1 I 6022 C 0 s canFam3.chr13 21790767 4 - 63241923 cttg i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I e nomLeu3.chr20 42643523 0 + 85365473 C a score=15929.000000 s hg38.chr9_KI270719v1_random 155737 5 + 176845 cttta s panTro5.chr20 31533653 5 + 66533130 tttta i panTro5.chr20 C 0 C 0 s panPan2.chr4 226034 5 - 195804263 tttta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72339 5 - 87586 cttta i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643523 5 + 85365473 cttta i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 59741 5 + 80219 cttta i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537542 3 - 189454096 ttt-- i macFas5.chr5 C 0 C 0 s saiBol1.JH378162 14659523 5 + 15139346 cttta i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494244 5 + 3802414 cttta i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9856330 5 + 11631747 cttta i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21790771 5 - 63241923 cttta i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318502 7 + 12320365 I e manLeu1.NW_012101853v1 42978 2805 + 294823 I e chlSab2.chr27 5269448 2933 + 48547382 I e cerAty1.NW_012002843v1 1268546 2625 + 25348628 I e macNem1.NW_012011022v1 3649267 2958 + 39453387 I a score=2232772.000000 s hg38.chr9_KI270719v1_random 155742 257 + 176845 tttttcaccacagaacttcctatcaactagtatgttgaatattttgcttattaa----ctttgtttattgtcttctccctcgattagaatattagctacttga--------gtacaaggatttgagcctattacgttcactgctgaattttaggctcctggaa-gataccctgcattcaatagagaccacacaataaatatatgtcaaataaatgagtCTGTAAGTTCATCAATTTATTTGCCCATATGCATTAACTTTTGCccatatac s panTro5.chr20 31533658 257 + 66533130 tttttcaccacagaacttcctatcaactagtatgtttaatattttgcttattaa----ctttgcttattgtcttctccctcgattagaatattagctacttga--------gtacaaggatttgagcctgttacgttcactgctgaatttcaggctcccggaa-gatatccagcattcaatagagaccacacaataaatatctgtcaaataaatgagtCTGTAAGTTCATCAATTTATTTGCCCATATGCATTAACTTTTGCCCATATAC i panTro5.chr20 C 0 C 0 s panPan2.chr4 226039 257 - 195804263 tttttcaccacagaacttcctatcaactagtatgtttaatattttgcttattaa----ctttgcttattgtcttctccctcgattagaatattagctacttga--------gtacaaggatttgagcctgttacgttcactgctgaatttcaggctcccggaa-gatatccagcattcaatagagaccacacaataaatatctgtcaaataaatgagtCTGTAAGTTCATCAATTTATTTGCCCATATGCATTAACTTTTGCCCATATAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72344 257 - 87586 tttttcaccacagaacttcctatcaactagtatgttgaatattttgcttattaa----ctttgtttattgtcttctccctcgattagaatattagctacttga--------gtacaaggatttgagcctgttacgttcactgctgaattttaggctcctggaa-gatacccagcattcaatagagaccacacaataaatatatgtcaaataaatgagtCTGTAAGTTCATCAATTTATTTGCCCATATGCATTAACTTTTGCCCATATAC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643528 257 + 85365473 tttttcaccacagaacttcctagcaattagcatgttgaatattttgattattaa----cagtgttcattttcttctccctcaattagaatattagctccttga--------gtacaaggatttgagcctgttactttcactgctgaattttaggctcctggaa-gatacccagcactcaatagagaccactcaataaatacatgtcaaataaatgagtCTGTAAGTTCATCAATTTATTTGCCCATGTACATTAATCTTTGCCCATATAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 59746 257 + 80219 tttttcaccacagaacttcctatcagctagtatgttgaatattttgcttattaa----ctttgtttatttttttctccctcaattagaatatttgctccttga--------gtgcaaggatttgagcctgttaggttcactgctgaattttaggctcctggaa-gatactcagcattcaagagagaccattcaataaatacatgtcaaatgaatgagtCTGTAAGTTCATCAATTTATTTGCCCATGTGCATTAACTTTTGCCCATATAC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537545 247 - 189454096 ttttttaccacagagcttcctatcaactagtatgttgaatattttgcttattaa----ctttgtttactctcttctccctc----------taagctccttga--------gtacaaggatttgagcctgttacgttcactggtgaattttaggatcctagaa-gatacccagcattcaatagagaccactcaataaatacatgtcaaataaatgagtCTGTAAGTTCATCAATTTATTCGCCCATGTACATTAAATTTTGCCCATATAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652225 247 + 39453387 ttttttaccacagagcttcctatcaactagtatgttgaatattttgcttattaa----ctttgtttactctcttctccctc----------taagctccttga--------gtacaaggatttgagcctgttacattcactggtgaattttaggatcctagaa-gatacccagcattcaatagagaccactcaataaatacatgtcaaataaatgagtCTGTAAGTTCATCAATTTATTCGCCCATGTACATTAAATTTTGCCCATATAC i macNem1.NW_012011022v1 I 2958 C 0 s cerAty1.NW_012002843v1 1271171 247 + 25348628 ttttttaccacagaacttcctctcaactagtacattgactattttgcttattaa----ctttgtttcctttcttctccctc----------taagctccttga--------gtacaaggatttgagcctgttacgttcactggtgaattttaggctcctagaa-gatacccagcattcaatagagaccactcaataaatacatgtcaaataaatgaatCTGTAAGTTCATCAATTTATTTGCCCATGTACATTAACTTTTGCCCATATAC i cerAty1.NW_012002843v1 I 2625 C 0 s chlSab2.chr27 5272381 247 + 48547382 ttttttaccacagaacttcctctcaactagtatgttgaatattttgcttattaa----ctttgtttactttcttctccctc----------taagctccttga--------gtacaaggatttgagcctgttacgttcactggtgaattttaggctcctagaa-gatacccagcattcaatagagaccactgaataaatacatgtcaaataaatgaatCTGTAAGTTCATCAATTTATTTGCCCATGTACATTAACTTTTGCCCATATAC i chlSab2.chr27 I 2933 C 0 s manLeu1.NW_012101853v1 45783 247 + 294823 ttttttaccacagaacttcctctcaactagtacgttgaatattttgcttattaa----ctttgtttactttcttctccctc----------taagctccttga--------gtacaaggatttgagcctgttacgttcactggtgaattttaggctcctagaa-gatacccagcattcaatagagaccactcaataaatacatgtcaaataaatgaatCTGTAAGTTCATCAATTTATTTGCCCATGTACATTAACTTTTGCCCATATAC i manLeu1.NW_012101853v1 I 2805 C 0 s colAng1.NW_012120821v1 4318509 247 + 12320365 ttttttaccacagaacttcctatcaactagtatattgaatattttgcttattaa----ctttgtttactttcttctccctc----------taagctccttga--------gtacaaggatatgagcctgttacgttcactggtgaattttaggctcctggaa-gatacccagcattcaatagagaccactcaataaatacatgtcaaataaatgagtCTGTAAGTTCATCAATTTATTTGCCCATGTACATTAACTTTTGCCCATATAC i colAng1.NW_012120821v1 I 7 C 0 s saiBol1.JH378162 14659528 257 + 15139346 tttttcaccacagaatttcccatcaacaggtacattgaatattttacttattaa----ctttgtttattgtcttctccctcaatttgaatattagctccttga--------gtacaaggatttgagcctgttacttttactgctgaattttaggttcctggaa-gatagtcagaattcaatagagactgctccataaatacatgtcaaataaatTAGTCTGTAAGTTCATCAATGTATTTGCCCATGTACATTAACTTTTGCCCATATAC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494249 256 + 3802414 tttttcaccacaaaa-ttcccatcaacaggtatgttgaatattttacttattaa----ctttgtttattgtcttctccctcaatttgaatattagctccttga--------gtacaaggatttgagcatgttacttttactgctgaaatttaggttcctggaa-gatacccggaattcaatagagactcctccataaatacatgtcaaataaatgagtCTGTAAGTTCATCAATGTATTTGCCCATGTACATTAACTTTTGCCTATATAC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9856335 257 + 11631747 tttttcaccacagaatttcccatcaacaggtatgttgaatattttacttattaa----ctttgtttattgtgttctccctcaatttgaatattagctccttga--------gtacaaggatttgagcctggtacttttactgctgaattttaggttcctggaa-tatacccagaattcaatagagattgttccttaaatatatgttaaataaataagtCTGTAAGTTCATCAATGTATTTGCCCATGTACATTAACTTTTGCCCATATAC i aotNan1.NW_018493494v1 C 0 I 17 s canFam3.chr13 21790776 259 - 63241923 ttttttactgcagaacttctagtcatctaatatgctaaatattttactaatttcatttcattgtttattgttttctctatcaactcagatataagctccctgagtttatatgtgtactgatgtgagtttattatgtgtattgctgaatttgaggctcttggaatggtacaggatactcaatagaggtcactcaataaatatgtgtgaaatacgtgagtCTCTAAGTTTA-CTATTTATTTGCCCATGCATATTA---TTTACT------- i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e calJac3.chr3 145770505 4195 + 190850796 I a score=37907.000000 s hg38.chr9_KI270719v1_random 155999 5 + 176845 atcca s panTro5.chr20 31533915 5 + 66533130 ATCCA i panTro5.chr20 C 0 C 0 s panPan2.chr4 226296 5 - 195804263 ATCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72601 5 - 87586 ATCCA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643785 5 + 85365473 ATCCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60003 5 + 80219 ATCCA i rheMac8.chrUn_NW_014841389v1 C 0 I 3 s macFas5.chr5 144537792 5 - 189454096 ATCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652472 5 + 39453387 ATCCA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1271418 5 + 25348628 ATCCA i cerAty1.NW_012002843v1 C 0 I 7 s chlSab2.chr27 5272628 5 + 48547382 ATCCA i chlSab2.chr27 C 0 I 7 s manLeu1.NW_012101853v1 46030 5 + 294823 ATCCA i manLeu1.NW_012101853v1 C 0 I 7 s colAng1.NW_012120821v1 4318756 5 + 12320365 ATCCA i colAng1.NW_012120821v1 C 0 I 7 s saiBol1.JH378162 14659785 5 + 15139346 AACCA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494505 5 + 3802414 AACCA i cebCap1.NW_016107603v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791035 0 - 63241923 C e aotNan1.NW_018493494v1 9856592 17 + 11631747 I e calJac3.chr3 145770505 4195 + 190850796 I a score=-19136.000000 s hg38.chr9_KI270719v1_random 156004 84 + 176845 tatacatcccatgcatacatatacatgcccatacatcccatacatccatatacatgcccatatacatccataACAAGAGTTATT s panTro5.chr20 31533920 3 + 66533130 ---------------------------------------------------------------------------------ATA i panTro5.chr20 C 0 C 0 s panPan2.chr4 226301 3 - 195804263 ---------------------------------------------------------------------------------ATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72606 3 - 87586 ---------------------------------------------------------------------------------ATA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643790 3 + 85365473 ---------------------------------------------------------------------------------ATA i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144537797 3 - 189454096 ---------------------------------------------------------------------------------ATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652477 3 + 39453387 ---------------------------------------------------------------------------------ATA i macNem1.NW_012011022v1 C 0 C 0 s saiBol1.JH378162 14659790 4 + 15139346 --------------------------------------------------------------------------------AACA i saiBol1.JH378162 C 0 I 3 s cebCap1.NW_016107603v1 494510 4 + 3802414 --------------------------------------------------------------------------------AAAA i cebCap1.NW_016107603v1 C 0 I 3 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791035 0 - 63241923 C e aotNan1.NW_018493494v1 9856592 17 + 11631747 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318761 7 + 12320365 I e manLeu1.NW_012101853v1 46035 7 + 294823 I e chlSab2.chr27 5272633 7 + 48547382 I e cerAty1.NW_012002843v1 1271423 7 + 25348628 I e rheMac8.chrUn_NW_014841389v1 60008 3 + 80219 I a score=8594.000000 s hg38.chr9_KI270719v1_random 156088 4 + 176845 ACTC s panTro5.chr20 31533923 4 + 66533130 ACTC i panTro5.chr20 C 0 C 0 s panPan2.chr4 226304 4 - 195804263 ACTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72609 4 - 87586 ACTC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643793 4 + 85365473 ACTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60011 4 + 80219 ACTC i rheMac8.chrUn_NW_014841389v1 I 3 C 0 s macFas5.chr5 144537800 4 - 189454096 ACTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652480 4 + 39453387 ACTG i macNem1.NW_012011022v1 C 0 C 0 s canFam3.chr13 21791035 2 - 63241923 --TC i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e aotNan1.NW_018493494v1 9856592 17 + 11631747 I e cebCap1.NW_016107603v1 494514 3 + 3802414 I e saiBol1.JH378162 14659794 3 + 15139346 I e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318761 7 + 12320365 I e manLeu1.NW_012101853v1 46035 7 + 294823 I e chlSab2.chr27 5272633 7 + 48547382 I e cerAty1.NW_012002843v1 1271423 7 + 25348628 I a score=54106.000000 s hg38.chr9_KI270719v1_random 156092 8 + 176845 TTGTTATA s panTro5.chr20 31533927 8 + 66533130 TTGTTATA i panTro5.chr20 C 0 C 0 s panPan2.chr4 226308 8 - 195804263 TTGTTATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72613 8 - 87586 TTGTTATA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643797 8 + 85365473 TTGTTATT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60015 8 + 80219 TTGTTATA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537804 8 - 189454096 TTGTTATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652484 8 + 39453387 TTGTTATT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1271430 8 + 25348628 TTGTTATT i cerAty1.NW_012002843v1 I 7 C 0 s chlSab2.chr27 5272640 8 + 48547382 TTGTTATT i chlSab2.chr27 I 7 C 0 s manLeu1.NW_012101853v1 46042 8 + 294823 TTGTTATT i manLeu1.NW_012101853v1 I 7 C 0 s colAng1.NW_012120821v1 4318768 8 + 12320365 TTGTTATT i colAng1.NW_012120821v1 I 7 C 0 s saiBol1.JH378162 14659797 5 + 15139346 ---TTATT i saiBol1.JH378162 I 3 C 0 s cebCap1.NW_016107603v1 494517 5 + 3802414 ---TTATC i cebCap1.NW_016107603v1 I 3 C 0 s canFam3.chr13 21791037 8 - 63241923 TTATTATT i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e aotNan1.NW_018493494v1 9856592 17 + 11631747 I e calJac3.chr3 145770505 4195 + 190850796 I a score=433886.000000 s hg38.chr9_KI270719v1_random 156100 48 + 176845 TGAAATCAACTGTACTATTTGCTTC-ATGTAATAGTTTA-----AAAatacaca s panTro5.chr20 31533935 48 + 66533130 TGAAATCAGCTGTACTATTTGCTTC-ATGTAATACTTTA-----AAAatatatg i panTro5.chr20 C 0 C 0 s panPan2.chr4 226316 48 - 195804263 TGAAATCAGCTGTACTATTTGCTTC-ATGTAATACTTTA-----AAAatatatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72621 48 - 87586 TGAAATCAACTGTACTATTTGCTTC-ATGTAATAGTTTA-----AAAatacata i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643805 48 + 85365473 TGAAATCAACTGTACTATTTGCCTC-ATGTAATACTTTT-----AAAatatata i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60023 48 + 80219 TGAAATCAACTCTACTATTTCCTTC-ATGTAATACTTTC-----AAAatatgtg i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537812 48 - 189454096 TGAAATCAACTGTACTATTTGCTTC-ATGTAATACTTTT-----AAAatatgta i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652492 48 + 39453387 TGAAATCAACTGTACTATTTGCTTC-ATGTAATACTTTT-----AAAatatgta i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1271438 48 + 25348628 TGAAATCAACTGTACTATTTACTTC-ATGTAATACTTTT-----AAAatatgta i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5272648 48 + 48547382 TGAAATCAACTGTACTATTTGCTTC-ATGTAATACTTTT-----AAAatatgta i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 46050 48 + 294823 TGAAATCAACTGTACTATTTACTTC-ATGTAATACTTTT-----AAAatatgta i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4318776 48 + 12320365 TGAAATCAACTGTACTATTTGCTTC-ATGTAATACTTTT-----AAAatatata i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14659802 49 + 15139346 TGAAATCAACTGCACTATTTACTTCTATGTAATAATTTA-----AAAATATTTG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494522 48 + 3802414 TGAAATCAACTGCACTATTTGCTTC-ATGTAATAATTTA-----AAAATATATA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9856609 48 + 11631747 TGAAATCAACTGTACTATTTGCTTC-ATGTAATAATTTA-----AAAATATATA i aotNan1.NW_018493494v1 I 17 C 0 s canFam3.chr13 21791045 53 - 63241923 TGAAATCAACTATATTTTATGCTTC-ATATAATGCTTTTTTTTAAAAAGACATA i canFam3.chr13 C 0 I 13 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e calJac3.chr3 145770505 4195 + 190850796 I a score=29293.000000 s hg38.chr9_KI270719v1_random 156148 4 + 176845 tgtg s panTro5.chr20 31533983 4 + 66533130 tgtg i panTro5.chr20 C 0 C 0 s panPan2.chr4 226364 4 - 195804263 tgtg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72669 4 - 87586 tgtg i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643853 4 + 85365473 tgtg i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60071 4 + 80219 tgta i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537860 4 - 189454096 tgtg i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652540 4 + 39453387 tgtg i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1271486 4 + 25348628 tgtg i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5272696 4 + 48547382 tgtg i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 46098 4 + 294823 tgtg i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4318824 4 + 12320365 tgtg i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14659851 2 + 15139346 TG-- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494570 4 + 3802414 TGTG i cebCap1.NW_016107603v1 C 0 I 40 s aotNan1.NW_018493494v1 9856657 4 + 11631747 TGTG i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e calJac3.chr3 145770505 4195 + 190850796 I a score=41738.000000 s hg38.chr9_KI270719v1_random 156152 6 + 176845 tgtata s panTro5.chr20 31533987 6 + 66533130 tgtata i panTro5.chr20 C 0 C 0 s panPan2.chr4 226368 6 - 195804263 tgtata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72673 6 - 87586 tgtata i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643857 6 + 85365473 tatata i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60075 6 + 80219 tataaa i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537864 6 - 189454096 tatata i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652544 6 + 39453387 tatata i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1271490 6 + 25348628 tgtata i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5272700 6 + 48547382 tgtata i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 46102 6 + 294823 tgtata i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4318828 6 + 12320365 tgtata i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14659853 6 + 15139346 TGTATA i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9856661 6 + 11631747 TATATA i aotNan1.NW_018493494v1 C 0 I 42 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e calJac3.chr3 145770505 4195 + 190850796 I a score=50562.000000 s hg38.chr9_KI270719v1_random 156158 12 + 176845 taaat------atataca s panTro5.chr20 31533993 12 + 66533130 taaat------atataca i panTro5.chr20 C 0 C 0 s panPan2.chr4 226374 12 - 195804263 taaat------atataca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72679 12 - 87586 taaat------atataca i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643863 12 + 85365473 taaat------atataca i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60081 8 + 80219 t----------atataca i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537870 18 - 189454096 taaagatatacatataca i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652550 18 + 39453387 taaagatatacatataca i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1271496 12 + 25348628 taaag------atataca i cerAty1.NW_012002843v1 C 0 I 162 s chlSab2.chr27 5272706 12 + 48547382 taaag------atataca i chlSab2.chr27 C 0 I 6 s manLeu1.NW_012101853v1 46108 12 + 294823 taaag------atataca i manLeu1.NW_012101853v1 C 0 I 166 s colAng1.NW_012120821v1 4318834 18 + 12320365 taaagatatacatataca i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14659859 12 + 15139346 TAAAT------acacaca i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e aotNan1.NW_018493494v1 9856667 42 + 11631747 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e calJac3.chr3 145770505 4195 + 190850796 I a score=14695.000000 s hg38.chr9_KI270719v1_random 156170 3 + 176845 gag s panTro5.chr20 31534005 3 + 66533130 gag i panTro5.chr20 C 0 C 0 s panPan2.chr4 226386 3 - 195804263 gag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72691 3 - 87586 gag i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643875 3 + 85365473 gag i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60089 3 + 80219 gag i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144537888 3 - 189454096 gag i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652568 3 + 39453387 gag i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5272724 3 + 48547382 gag i chlSab2.chr27 I 6 C 0 s colAng1.NW_012120821v1 4318852 3 + 12320365 gag i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14659871 3 + 15139346 gaa i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e aotNan1.NW_018493494v1 9856667 42 + 11631747 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 46120 166 + 294823 I e cerAty1.NW_012002843v1 1271508 162 + 25348628 I a score=31374.000000 s hg38.chr9_KI270719v1_random 156173 8 + 176845 atcataga s panTro5.chr20 31534008 8 + 66533130 atcataga i panTro5.chr20 C 0 C 0 s panPan2.chr4 226389 8 - 195804263 atcataga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72694 8 - 87586 atcataga i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643878 8 + 85365473 atcgcaga i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60092 8 + 80219 atcataga i rheMac8.chrUn_NW_014841389v1 C 0 I 23 s macFas5.chr5 144537891 8 - 189454096 atcataga i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652571 8 + 39453387 atcataga i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5272727 8 + 48547382 atcataga i chlSab2.chr27 C 0 C 0 s colAng1.NW_012120821v1 4318855 8 + 12320365 atcataga i colAng1.NW_012120821v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e aotNan1.NW_018493494v1 9856667 42 + 11631747 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e saiBol1.JH378162 14659874 0 + 15139346 C e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 46120 166 + 294823 I e cerAty1.NW_012002843v1 1271508 162 + 25348628 I a score=15980.000000 s hg38.chr9_KI270719v1_random 156181 5 + 176845 cctaa s panTro5.chr20 31534016 5 + 66533130 cctaa i panTro5.chr20 C 0 C 0 s panPan2.chr4 226397 5 - 195804263 cctaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72702 5 - 87586 cctaa i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643886 5 + 85365473 cctaa i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144537899 5 - 189454096 cctaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652579 5 + 39453387 cctaa i macNem1.NW_012011022v1 C 0 I 144 s chlSab2.chr27 5272735 5 + 48547382 cctaa i chlSab2.chr27 C 0 C 0 s colAng1.NW_012120821v1 4318863 5 + 12320365 cttaa i colAng1.NW_012120821v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e aotNan1.NW_018493494v1 9856667 42 + 11631747 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e saiBol1.JH378162 14659874 0 + 15139346 C e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 46120 166 + 294823 I e cerAty1.NW_012002843v1 1271508 162 + 25348628 I e rheMac8.chrUn_NW_014841389v1 60100 23 + 80219 I a score=38570.000000 s hg38.chr9_KI270719v1_random 156186 22 + 176845 ctccgtc-tatatatgtgtgtat s panTro5.chr20 31534021 22 + 66533130 ctccgtc-tatatatgtgtgtat i panTro5.chr20 C 0 C 0 s panPan2.chr4 226402 22 - 195804263 ctccatc-tatatatgtgtgtat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72707 22 - 87586 ctccatc-tatatatgtgtgtat i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643891 23 + 85365473 gtcagtcatacatgtgtgtgtat i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144537904 23 - 189454096 gtcagtcatatatacatgtgtat i macFas5.chr5 C 0 I 12 s chlSab2.chr27 5272740 23 + 48547382 gtcagtcatatatatatgtgtat i chlSab2.chr27 C 0 I 125 s colAng1.NW_012120821v1 4318868 23 + 12320365 gtcagtcgtatatatgtgtgtat i colAng1.NW_012120821v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e aotNan1.NW_018493494v1 9856667 42 + 11631747 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e saiBol1.JH378162 14659874 0 + 15139346 C e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 46120 166 + 294823 I e cerAty1.NW_012002843v1 1271508 162 + 25348628 I e macNem1.NW_012011022v1 3652584 144 + 39453387 I e rheMac8.chrUn_NW_014841389v1 60100 23 + 80219 I a score=2576.000000 s hg38.chr9_KI270719v1_random 156208 2 + 176845 gt s panTro5.chr20 31534043 2 + 66533130 gt i panTro5.chr20 C 0 C 0 s panPan2.chr4 226424 2 - 195804263 gt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72729 2 - 87586 gt i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643914 2 + 85365473 at i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144537939 1 - 189454096 -t i macFas5.chr5 I 12 I 1 s colAng1.NW_012120821v1 4318891 2 + 12320365 gt i colAng1.NW_012120821v1 C 0 I 178 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e aotNan1.NW_018493494v1 9856667 42 + 11631747 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e saiBol1.JH378162 14659874 0 + 15139346 C e calJac3.chr3 145770505 4195 + 190850796 I e manLeu1.NW_012101853v1 46120 166 + 294823 I e chlSab2.chr27 5272763 125 + 48547382 I e cerAty1.NW_012002843v1 1271508 162 + 25348628 I e macNem1.NW_012011022v1 3652584 144 + 39453387 I e rheMac8.chrUn_NW_014841389v1 60100 23 + 80219 I a score=14798.000000 s hg38.chr9_KI270719v1_random 156210 56 + 176845 gatatat---------------------------------ataaatatatacacac--atatatgactgacatatatatataaatatatac s panTro5.chr20 31534045 44 + 66533130 gatatat---------------------------------ataaatatatacacacatatatatgactgacgtatat-------------- i panTro5.chr20 C 0 C 0 s panPan2.chr4 226426 44 - 195804263 gatatat---------------------------------ataaatatatacacacatatatatgactgacgtatat-------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72731 52 - 87586 gatatat---------------------------------ataaatatatacacacatatatatgactgacatatat------ataaatat i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42643916 85 + 85365473 -atatgtttatttatttgttatttctgtatttatttatcaataagtatattgatttgtttatat-ataaacatatat----ttatatatat i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144537941 60 - 189454096 -----------------gttatttatgtatttatttatcaataaatacattgatttgtttatat--ataacatatat------ac------ i macFas5.chr5 I 1 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e aotNan1.NW_018493494v1 9856667 42 + 11631747 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e saiBol1.JH378162 14659874 0 + 15139346 C e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318893 178 + 12320365 I e manLeu1.NW_012101853v1 46120 166 + 294823 I e chlSab2.chr27 5272763 125 + 48547382 I e cerAty1.NW_012002843v1 1271508 162 + 25348628 I e macNem1.NW_012011022v1 3652584 144 + 39453387 I e rheMac8.chrUn_NW_014841389v1 60100 23 + 80219 I a score=48525.000000 s hg38.chr9_KI270719v1_random 156266 71 + 176845 acacacacatatatatgactgacatatatataaatatatacacac----acatagatatgactg----ctatatatatc s panTro5.chr20 31534089 48 + 66533130 -----------------------atatatataaatatatacacac----acatagatatgactg----atatatatatc i panTro5.chr20 C 0 C 0 s panPan2.chr4 226470 48 - 195804263 -----------------------atatatataaatatatacacac----acatagatatgactg----atatatatatc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72783 71 - 87586 atacacacatatatataactgacatatatataaatatatacacac----acatagatatgactg----atatatatatc i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644001 76 + 85365473 acacacacatatatatGATGGacatatatgtatatatatacatatatggacatatatatacatat---atgtacatata i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60123 73 + 80219 acatacacacatgtatgactgacatatatataaatatatacac------acatttatatgactgatacatgtatatgta i rheMac8.chrUn_NW_014841389v1 I 23 C 0 s macFas5.chr5 144538001 42 - 189454096 acacacacatatatatatcagtcatatatat-------------------------------------gtgtgtatata i macFas5.chr5 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e aotNan1.NW_018493494v1 9856667 42 + 11631747 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e saiBol1.JH378162 14659874 0 + 15139346 C e calJac3.chr3 145770505 4195 + 190850796 I e colAng1.NW_012120821v1 4318893 178 + 12320365 I e manLeu1.NW_012101853v1 46120 166 + 294823 I e chlSab2.chr27 5272763 125 + 48547382 I e cerAty1.NW_012002843v1 1271508 162 + 25348628 I e macNem1.NW_012011022v1 3652584 144 + 39453387 I a score=7153.000000 s hg38.chr9_KI270719v1_random 156337 3 + 176845 tat s panTro5.chr20 31534137 3 + 66533130 tat i panTro5.chr20 C 0 C 0 s panPan2.chr4 226518 3 - 195804263 tat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72854 3 - 87586 tat i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644077 3 + 85365473 tAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60196 3 + 80219 CAt i rheMac8.chrUn_NW_014841389v1 C 0 I 6 s macFas5.chr5 144538043 3 - 189454096 tat i macFas5.chr5 C 0 I 6 s calJac3.chr3 45075115 3 - 190850796 tac i calJac3.chr3 n 4195 C 0 s saiBol1.JH378162 477411 3 - 15139346 tac i saiBol1.JH378162 n 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e aotNan1.NW_018493494v1 9856667 42 + 11631747 I e cebCap1.NW_016107603v1 494574 40 + 3802414 I e colAng1.NW_012120821v1 4318893 178 + 12320365 I e manLeu1.NW_012101853v1 46120 166 + 294823 I e chlSab2.chr27 5272763 125 + 48547382 I e cerAty1.NW_012002843v1 1271508 162 + 25348628 I e macNem1.NW_012011022v1 3652584 144 + 39453387 I a score=226019.000000 s hg38.chr9_KI270719v1_random 156340 25 + 176845 CTTGTGTAAGTGGAATCAGGCAGTA s panTro5.chr20 31534140 25 + 66533130 CTTGTGTAAGTGGAATCAGGAAGTA i panTro5.chr20 C 0 C 0 s panPan2.chr4 226521 25 - 195804263 CTTGTGTAAGTGGAATCAGGAAGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72857 25 - 87586 CTTGTGTAAGTGGAATCAGGCAGTA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644080 25 + 85365473 CTTATGTAAGTGGAATCAGGCAGTA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60205 25 + 80219 cttatataagtggaatcaggcagta i rheMac8.chrUn_NW_014841389v1 I 6 C 0 s macFas5.chr5 144538052 25 - 189454096 cttatgtaagtggaatcaggcagta i macFas5.chr5 I 6 C 0 s macNem1.NW_012011022v1 3652728 25 + 39453387 cttatgtaagtggaatcaggcagta i macNem1.NW_012011022v1 I 144 C 0 s cerAty1.NW_012002843v1 1271670 25 + 25348628 CTTATGTAAGTGCAATCAGACAGTA i cerAty1.NW_012002843v1 I 162 C 0 s chlSab2.chr27 5272888 25 + 48547382 CTTATGTAAGTGGAATCAGACAGTA i chlSab2.chr27 I 125 C 0 s manLeu1.NW_012101853v1 46286 25 + 294823 CTTATGTAAGTGGAATCAGACAGTA i manLeu1.NW_012101853v1 I 166 C 0 s calJac3.chr3 45075118 25 - 190850796 cttatgtaagtgaaatcaggcagta i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 477414 25 - 15139346 cttatgtaagtggaatcaggcagta i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 3305818 25 - 3802414 cttatgtaagtggaatcaggcagta i cebCap1.NW_016107603v1 n 40 C 0 s aotNan1.NW_018493494v1 1772993 25 - 11631747 cttatgtaagtggaatcaggcagta i aotNan1.NW_018493494v1 n 42 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e canFam3.chr13 21791098 13 - 63241923 I e colAng1.NW_012120821v1 4318893 178 + 12320365 I a score=262026.000000 s hg38.chr9_KI270719v1_random 156365 37 + 176845 TTCAAACATACTTTCAATTAGTAATGACTATAGTTTA s panTro5.chr20 31534165 37 + 66533130 TTCAAACATACTTTCAATTAGTAACGACTATAGTTTA i panTro5.chr20 C 0 C 0 s panPan2.chr4 226546 37 - 195804263 TTCAAACATACTTTCAATTAGTAACGACTATAGTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72882 37 - 87586 TTCAAACATACTTTCAATTAGTAATGACTATAGTTTA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644105 32 + 85365473 TTCAAACATACTTTCAATTAGTAATGACTATA----- i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60230 31 + 80219 ttCAAACA----TTCAATTAGTAATGACTATAGTT-- i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144538077 33 - 189454096 ttCAAACATACTTTCAATTAGTAACGACTATAA---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652753 33 + 39453387 ttCAAACATACTTTCAATTAGTAATGACTATAA---- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1271695 33 + 25348628 TTCAAACATACTTTCAATTAGTAATGACTATAA---- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5272913 33 + 48547382 TTCAAACATACTTTCAATTAGTAATGACTATAA---- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 46311 33 + 294823 TTCAAACATACTTTCAATTAGTAATGACTATAA---- i manLeu1.NW_012101853v1 C 0 C 0 s calJac3.chr3 45075143 32 - 190850796 ttCAAACATACTCACGATTAGTAGTGACTATA----- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 477439 32 - 15139346 ttCAAACATACTTACAATTAGTAATGACTATA----- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 3305843 32 - 3802414 ttCAAACATACTTACAATTAGTAATGACTATA----- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 1773018 32 - 11631747 ttCAAACATACTTACAATTAGTAATGACTATA----- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 41447955 37 + 63241923 TTTAAACACAGTTTTATTCAGTAATGACAGAAGTTCA i canFam3.chr13 n 13 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE943013v1 63801 90 - 280608 I e colAng1.NW_012120821v1 4318893 178 + 12320365 I a score=1683.000000 s hg38.chr9_KI270719v1_random 156402 3 + 176845 AAT s panTro5.chr20 31534202 3 + 66533130 ACT i panTro5.chr20 C 0 C 0 s panPan2.chr4 226583 3 - 195804263 ACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72919 3 - 87586 AAT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60261 1 + 80219 --T i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s tarSyr2.KE948818v1 242694 3 - 1045278 GAT i tarSyr2.KE948818v1 n 90 n 90 s canFam3.chr13 41447992 3 + 63241923 GAT i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e aotNan1.NW_018493494v1 1773050 0 - 11631747 C e cebCap1.NW_016107603v1 3305875 0 - 3802414 C e saiBol1.JH378162 477471 0 - 15139346 C e calJac3.chr3 45075175 0 - 190850796 C e colAng1.NW_012120821v1 4318893 178 + 12320365 I e manLeu1.NW_012101853v1 46344 0 + 294823 C e chlSab2.chr27 5272946 0 + 48547382 C e cerAty1.NW_012002843v1 1271728 0 + 25348628 C e macNem1.NW_012011022v1 3652786 0 + 39453387 C e macFas5.chr5 144538110 0 - 189454096 C e nomLeu3.chr20 42644137 0 + 85365473 C a score=12560.000000 s hg38.chr9_KI270719v1_random 156405 16 + 176845 ----AAGAGAAAGTTTAAAG s panTro5.chr20 31534205 16 + 66533130 ----AAGAGAAAGTTTAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 226586 16 - 195804263 ----AAGAGAAAGTTTAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72922 16 - 87586 ----AAGAGAAAGTTTAAAG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60262 16 + 80219 ----AAGAGAAAGTTTAAAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s canFam3.chr13 41447995 19 + 63241923 ATTTTCAATAAAATGAAAA- i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e aotNan1.NW_018493494v1 1773050 0 - 11631747 C e cebCap1.NW_016107603v1 3305875 0 - 3802414 C e saiBol1.JH378162 477471 0 - 15139346 C e calJac3.chr3 45075175 0 - 190850796 C e colAng1.NW_012120821v1 4318893 178 + 12320365 I e manLeu1.NW_012101853v1 46344 0 + 294823 C e chlSab2.chr27 5272946 0 + 48547382 C e cerAty1.NW_012002843v1 1271728 0 + 25348628 C e macNem1.NW_012011022v1 3652786 0 + 39453387 C e macFas5.chr5 144538110 0 - 189454096 C e nomLeu3.chr20 42644137 0 + 85365473 C a score=1875266.000000 s hg38.chr9_KI270719v1_random 156421 217 + 176845 ATTCTGATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGTATTT-GGGG-AAAAAGATTACAAATAGAGATATTATGATAAAAGTGTACAATATTTTTTATGTTTGTGCACTTAGATCCATGTTCAAACTTTGGCTCACCTATACATGTATA-GCACATTGGAATATGTGCTACAGTATGCCATTTATAAAGACTGAAAATAATAGTTTAT-AAA s panTro5.chr20 31534221 214 + 66533130 CTTCTGATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGTATTT-GGGG-AAAAAGATTACAAATAGAGA---TATGATAAAAACGTACAATATTTTTTATGTCTGTACACTTAGATCCATGTTCAAAGTTTGGCTCACCTATACATGTATA-GCACATTTGAATATGTGCTACAGTATGCCACTTATAAAGACTGAAAATAATAGTTTAT-AAA i panTro5.chr20 C 0 C 0 s panPan2.chr4 226602 214 - 195804263 CTTCTGATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGTATTT-GGGG-AAAAAGATTACAAATAGAGA---TATGATAAAAGCGTACAATATTTTTTATGTCTGTACACTTAGATCCATGTTCAAAGTTTGGCTCACCTATACATGTATA-GCACATTTGAATATGTGCTACAGTATGCCACTTATAAAGACTGAAAATAATAGTTTAT-AAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 72938 217 - 87586 ATTCTGATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGTATTT-GGGG-AAAAAGATTACAAATAGAGATATTATGATAAAAGCGTACAATATTTTTTATGTTTGTGCACTTAGATCCATGTTCAAACTTTGGCTCACCTATACATGTATA-GCACATTGGAATATGTGCTACAGTATGCCATTTATAAAGACTGAAAATAATAGTTTAT-AAA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644137 209 + 85365473 ATTCTCGTGGTTTAAATAAGAGAAAGCAAACATC------------AGTTTTT-AGGG-GAAAGGATTACAAATAGGGATATTGTGATAAAAGCGTAAAATATTTTTTATGTTTGTGCACTTAGACCCATGTTCAAGCTGTAGCTCACCTATATATGCATA-GCACCTTTGAATATGTGCTAAAGTATGCCATTTAAAAAGACTGAAAATAATATTGTATAAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60278 213 + 80219 CTTCTGATAATTTAAATAAG----AGCAAACATC---ACTACTACTAGTTTTT-TGGG-GAAAAGATTACAAATAGGGATAGTGTGATAAAAGTGTACAATATTATTTACATTTGTGCACTTAGATCCACGTTCAAACTTTGGCTCACGTATATATGTATA-GCACATTTGAATATGTGCTACAATATGCCATTTATAAAGACTGAAAATAATAGTTTAT-AAA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144538110 217 - 189454096 -TTCTCATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGTTTTTCTGTG-AAAAAGATTACAAATAGGGATATTGTGATAAAAGCGTAAAATATT-TTTACATTTGTGCACTTAGATCCATGTTCAAGCTGTATCGCATCTGTACATGCATA-GCACCTTTGAGTATGTGCTACAGTATGCCATTTATAAAGACTGAAAATAATATTGTATAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3652786 217 + 39453387 -TTCTCATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGTTTTTCTGTG-AAAAAGATTACAAATAGGGATATTGTGATAAAAGCGTAAAATATT-TTTACATTTGTGCACTTAGATCCATGTTCAAGCTGTATCGCATCTGTACATGCATA-GCACCTTTGAGTATGTGCTACAGTATGCCGTTTATAAAGACTGAAAATAATATTGTATAAAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1271728 217 + 25348628 -TTCTCATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGTTTTTTTGGG-AAAAAGATTACAAATAGGGATATTGTGATAAAAGCGTAAAATATT-TTTACGTTTGTGCACTTAGATCCATGTTCAAGCTGTATCGCACCTATACATGCATA-GCACCTTTGAGTATGTGCTACAGTATGCCATTTATAAAGACTGAAAATAATATTGTATAAAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5272946 217 + 48547382 -TTCTCATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGTTTTTTTGGG-AAAAAGATTACAAATAGGGATATTGTGATAAAAGCGTAAAATATT-TTTACGTTTGTGCACTTAGATCCATGTTCAAGCTGTATCGCACCTATACATGCATA-GCACCTTTGAGTATGTGCTACAGTATGCCATTTATAAAGACTGAAAATAATATTGTATAAAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 46344 217 + 294823 -TTCTCATAGGTAAAATAAGAGAAAGCAAACATC---ACTACTACTAGTTTTTTTGGG-AAAAAGATTACAAATAGGGATATTGTGATAAAAGCGTAAAATATT-TTTACGTTTGTGCACTTAGATCCATGTTCAAGTTGTATTGCACCTATACATGCATA-GCACCTTTGAGTATGTGCTACAGTATGCCATTTATAAAGACTGAAAATAATATTGTATAAAA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319071 218 + 12320365 ATTCTCATAGTTTAAATAAGACAAAGCAAACATC---ACTACTACTAGTTTTTTGGGG-AAAAAGGTTACAAATAGGGATATTGTGATAAAAGCGTAAAATATT-TTTACGTTTGTGCACTTAGATCCATGTTCAAGCTGTATCTCACCTATACATGCATA-GCACCTTTGAGTATGTGCTACAGTATGCCATTTATAAAGACTGAAAATAATATTGTATAAAA i colAng1.NW_012120821v1 I 178 C 0 s calJac3.chr3 45075175 211 - 190850796 ATTCTGACAGTT----TAAGAGAAAGCAAACATC---ACTACTACTAGCTTTT---GGAGAAAAAATTACAAATAGGAATATTGTGATAAAAGTAT-AAATATTTTTTACATTTGTGAACTTAGATCCATGTTCAAGCTTTAGCTCACCTATACACGCATA-ATGCATTTGAATATGTTGTGCCGTATACCATTTATACAGATTGaaaatattattttataaa- i calJac3.chr3 C 0 I 1 s saiBol1.JH378162 477471 215 - 15139346 ATTCTGATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGCTTTT---GG-GGAAAAATTACAAATAGGAATATTGTGATAGAAGTGTAAAATATTTTTTACATTTGTGAACTTAGATCCATGTTCAAGCTTTAGCTCACCTATACACACATA-GTGCATTTGAATATCTTGTACCGTATACCATTTATACAGATAGaaaatattattttataaa- i saiBol1.JH378162 C 0 I 1 s cebCap1.NW_016107603v1 3305875 216 - 3802414 ATTCTGATAATTTAAATAAGAGATAGCAAACATC---ACTACTATTAGCATTT---GGTGAGAAAATTACAAATAGGAATATTGTGATAAAAGTGTACAATATGTTTTACATTTGTGAACTTAGATCCATGTTCAAGCTTTAGCTCACCTATACACGCATA-GTGCATTTGAATATCTTATACCATATACCATTTATACAGATTGAAAATATTATTTTATAAA- i cebCap1.NW_016107603v1 C 0 n 0 s aotNan1.NW_018493494v1 1773050 212 - 11631747 ATTCTGATAGTTTAAATAAGAGAAAGCAAACATC---ACTACTACTAGCTTTT---GG-GGAAAAATTACAAATAGGAATATTGTGATAAAAGTGTACAATATTTTTTACATTTGTGAACTTAGATCCATGTTCAAGCTTTAGCTTACCTATACACGCATA-GTGCATTTGAATATGTTGTACCATATACCATTTATACAGATTGAAAATATTA---TATAAA- i aotNan1.NW_018493494v1 C 0 I 1 s canFam3.chr13 41448014 220 + 63241923 CTACCACTAGTTT---TGGAAGAGaattattattttttttatttttatttttttttGG-AAGAGAATTATAAATAGGGTTATAGTGATGATAGTATATAATAGTCTTTACTTTTGTGTATTTAAATCCATGTTCAATCCTTAGCTCACTTATACATGTATATGCACATTTGAAAATGCACCATGGCATACCATTTGTGGAGAATGCAAAGAATGCCTAAAAAAA i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE948818v1 242697 90 - 1045278 I a score=2450521.000000 s hg38.chr9_KI270719v1_random 156638 322 + 176845 CA-TTA-TTATTTATTTAGCAACCTCATAAGC-TT-GGTTTCAAAAATA--CCTGAATTACATAGCATAATCCCAGTGCtggagaacagaacagtagctgccaagggttagggttggttggaagatgtgattagtgagggttaatgtgaaaacatgt---actttgtttgtggtgatagagcagttctgcatccagattatggtaatggttacataaatccacacttcatagatctatatacacacatcacacatacattcaaacacatct--------------------gtacatgtaaaatccttagaaatataaatagggtctgaacctgagttaatggtatggaaa s panTro5.chr20 31534435 322 + 66533130 CA-TTA-TTATTTATTTAGCAACCTCATAAGC-TT-GGCTTCAAAAATA--CCTGAATTACATAGCATAATCCCAGTGCtggagaacagatcggtggctgccgagggttagggttggttgaaagatgtgattagtgagggataacgtgaaaacatgt---actttctttgtggtgatagagcagttctgcatccagattatggtgatggttacataaatccacacttcatagatctatacacacacatcacacatacattcaaacacatct--------------------gtacatgtaaactccttacaaatatgaatagggtctgaacctgagttaatggcatggcaa i panTro5.chr20 C 0 C 0 s panPan2.chr4 226816 322 - 195804263 CA-TTA-TTATTTATTTAGCAACCTCATAAGC-TT-GGCTTCAAAAATA--CCTGAATTACatagcataatcccagcgctggagaacagatcggtggctgccgagggttagggttggttggaagatgtgattagtgagggataacgtgaaaacatgt---actttctttgtggtgatagagcagttctgcatccagattatggtgatggttacataaatccacacttcatagatctatacacacacatcacacatacattcaaacacatct--------------------gtacatgtaaactccttagaaatatgaatagggtctgaacctgagttaatggcatggcaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 73155 321 - 87586 CA-TTA-TTATTTATTTAGCAA-CTCATAAGC-TT-GGTTTCAAAAATA--CCTGAATTACATAGCATAATCCCAGTGCtggagaacagaacagtagctgccaagggttagggttggctggaagatgtgattagtgagggataacgtgaaaacatgt---actttgtttgtggtgatagagcagttctgcatccagataatggtaatggttacataaatccacacttcatagatctatacacacacatcacacatacattcaaacacatct--------------------gtacatgtaaaatccttagaaatatgaatagggtctgaacctaagttaatggtatggaaa i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644346 331 + 85365473 CA-TTA-TTATTTATTTAGCAAACTCACGACCTTT-GGTTTCAAAAATG--CCTGGATTACatagcataatcatagcgatggagaagagatcagtggctgccaagggttagggttgattggaagatgtgattagtgaggaataacgtgaaaacatgt---actttctttgtggcgataaagcagttctgcatctagattgtggtaatgattatacaaatccacacttcatagaactatacacacacatcacatataccctcacacacacctat------------acaagagtacatgtaaaatccttagaaatataaatagggtctgaacctgagttaatggtatggaaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60491 309 + 80219 C----A-TTATTTATTTAGCAACCTCATGAGC-TT-GGTTTCAAAAATA--CCTGAGTTACatagcataatcctagtgatggagaacagatcagtggctgccaagggttagggttggttggaagatgtgattagtgagggataacatgaaaacatgttgca----ctttatggcgatagagcagttcttcatccagattatagtgatggatacataaatccacacttcatagatctat--acacacatcacacatacattcacacacacct--------------------gtacgtgtaaaatcctt-------tgaatagtgtctgaacctgagttaatggcatggaaa i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144538327 330 - 189454096 C----A-TCATTTATTTAGCAACCTCATGAGC-TTCGGTTTCAAAAATG--CCTGGATTACatagcataattgtagtgatggagaacagaacagtggctgtcaagggttagagctggttggaagatgtgattagtgagagataacacgaaaatgtgttgtgctttctttgtggtgatagagcagttctgcagctagattatggtgatggttacataaatccacacttcataaaactatacacacacatcacacgtacactcacacacacct-c------------acaagagtacatgtaaaatccttagaaatatgaatagggtccggacctgagttaatggtatggaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653003 330 + 39453387 C----A-TCATTTATTTAGCAACCTCATGAGC-TTCGGTTTCAAAAATG--CCTGGATTACatagcataattgtagtgatggagaacagaacagtggctgtcaagggttagagctggttggaagatgtgattagtgagagataacacgaaaatgtgttgtgctttctttgtggtgatagagcagttctgcagctagattatggtgatggttacataaatccacacttcataaaactatacacacacatcacacgtacactcacacacacct-c------------acaagagtacatgtaaaatccttagaaatatgaatagggtccggacctgagttaatggtatggaaa i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1271945 331 + 25348628 C----A-TTATTTATTTAGCAACCTCATGAGC-TTCGGTTTCAAAAATG--CCTGGATTACatagcataattgtagtgatggagaacagaacagtggctgtgaagggttagagctggttggaagatgtgattagtgagagataacatgaaaatgtgttttgctttctttgtggtgatagagcagttctacagctagattatggtgatggttacataaatccacacttcatagaactatacacatacatcacacatacactcacacacacctac------------acaagagtacatgtaaaatccttagaaatatgaatagggtcCGGACCTGAGTTAATGGTATGGAAA i cerAty1.NW_012002843v1 C 0 I 440 s chlSab2.chr27 5273163 331 + 48547382 C----A-TTATTTATTTAGCAACCTCATGAGC-TTTGGTTTCAAAAATG--CCTCGATTACatagcataattgtagtgatggagaacagaacagtggctgtgaagggttagagctggctggaagatgtgattagtgagagataacatgaaaatgtgttgtgctttctttgtggtgatagagcagttctacagctagattatggtgaaggttacataaatccacacttcatagaactatacacacacatcacacatacactcacacacacctac------------acaagagtacatgtaaaatccttagaaatatgaatagggtacggacctgagttaatggtatggaaa i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 46561 331 + 294823 C----A-TTATTTATTTAGCAACCTCATGAGC-TTCGGTTTCAAAAATG--CCTGGATTACatagcataattgcagtgatggagaacagaacagtggctgtgaagggttaaagctggttggaagatgtgattagtgagagataacatgaaaatgtgttgtgctttctttgtggtgatagagcagttctacagctagattatggtgatggttacataaatccacacttcatagaactatacacacacatcacacatgcactcacacacacctac------------acaagagtacatgtaaaatccttagaaatatgaatagggtccagacctgagttaatggtatggaaa i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319289 331 + 12320365 C----A-TTATTTATTTAGCAACCTCATGAGG-TTCGCTTTCAAAAATG--CCTGGATTACatagcataattgtagtgatggagaacagaacagtagctgtcaagggttagagctgcttggaagatgtgattagtgagggataacatgaaaatgtgttgtgctttctttgtggtgacagagcagttctacagctagattatggtgatggttacataaatccacacttcatagaactatacacacacatcacacatacactcacacacatctac------------acaagaatacatgtaaaatccttagaaatatgaatagggtccggacctgagttaatggtatggaaa i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 45075387 313 - 190850796 -aatgatttttttatttaGCAAACTCATGAGC-TTTAGTTCCAAAAATG--CCTGAATTACAAAGcataatcctagtgatggaga-tagatcagtggctgccaagggtcagggttggttggaaaatgtggttagtaagggataatgtaaaaatatgttgtacattttttgtggtgatagagcagatatgcatgcagatcaaggtgatggttacataaatccacactccatagaactatatacacacatcacacgtacactcacatatacctgc------------acaagtgtacatgtaaaatccttagaaata---------------------ttaatggtatggaaa i calJac3.chr3 I 1 C 0 s saiBol1.JH378162 477687 313 - 15139346 -aatta-ttttttatttaGCAACCTCATGAGC-TTTGGTTTCAAAAATG--TCTGAATTACatagcataatcctagtgatggagactagatcagtggctgccaagggtcagggttgtttggaaaatgtgattagtaagggttaatgtaaaaacatgttgtactttttttgtggtgatagagcagatatgcttccagattaaggtgatggttacataaatccacactccatagaactatatacacacatcactcatacactcacatacacctac------------acaagcatacttgtaaaattcttagaaata---------------------ttaatggtatgtaaa i saiBol1.JH378162 I 1 C 0 s aotNan1.NW_018493494v1 1773263 325 - 11631747 -AATTA-TTTTTTATTTAGCAAACTCTTGAGC-TTTGGTTTCAAAAATG--CCTGAATTACATAGCGTaatcctagtgatggagaatagatcagtggctgccaagggtcagggttggttggaaaatgtgattagtaagggctaatgtgaaagcatgttgtactttttttgtggtgatagagcagatatgcatccagattaaggtgatggttacataaatccacactccatagaactatatacacacatcacacatacactcacatacacctacacctttacatgtacaagcatacatgtaaaatccttagatata---------------------ttaatggtatggaaa i aotNan1.NW_018493494v1 I 1 C 0 s canFam3.chr13 41448234 268 + 63241923 -----A-ATTGGCATTCAA-AGTCTCCTGGAC-TTTAGGTTCAAAAAAGGTCTTAAATTAGAGATAAGAATTCTAGTGATGCAGAGCAGATAGGTGGTTGCCTAGGACTAGA-----------------------------------------ATATGGTGCTTT-Tttgtggtgatagagaagttc-atatcctgattgcagtgatggttacatgaatctttgcttcattgg-------aaccacagtatgc-------catgcacacgtaa------------------acgtacgtaaaaacctttgaaatctgattagaatctgaacctgagttaatagtatcgtac i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I a score=1117168.000000 s hg38.chr9_KI270719v1_random 156960 180 + 176845 caatgtccatttcctgattttggcaacgtactagg-----ttaagttagatataatcattg---gggaaagttgcctgaaaatagcatggtcattcattttacttctttttttaacttcttatgagtcaaattattttaaaacaaaaggtattaaGCAAAGACAAAAATTTGAAAGTTCAAAAATCAA s panTro5.chr20 31534757 180 + 66533130 caatgtcaatttcctgattttggcaacgtactagg-----ttaagttagatataatcattg---gggaaagttgcctgaaaatagcatggtcattctttttacttctttttttcacttcttatgagtcaaattattttaaaacaaaaggtattaaACAAAGACAAAAATTTGAAAGTTCAAAAATCAA i panTro5.chr20 C 0 C 0 s panPan2.chr4 227138 180 - 195804263 caatgtcaatttcctgattttggcaacgtactagg-----ttaagttagatataatcattg---gggaaagttgcctgaaaatagcatggtcattctttttacttctttttttcacttcttatgagtcaaattattttaaaacaaaaggtattaaACAAAGACAAAAATTTGAAAGTTCAAAAATCAA i panPan2.chr4 C 0 I 61528 s gorGor5.CYUI01000881v1 73476 180 - 87586 caatgtcaatttcctgattttggcaacgtactagg-----ttaagttagatataatcattg---gggaaagttgcctgaaaatagcatggtcattcattttacttctttttttaacttcttatgagtcaaattattttaaaacaaaaggtattaaGCAAAGACAAAAATTTGAAAGTTCAAAAATCAA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644677 144 + 85365473 caa-----------agattttggcaatgtactagg-----taaagttagacataatcattg---gggaaagttggctgaaaataacacagtcattctttttac-tatttttgtgacgttttatgagtcaaattcttttaaaataaaa------------------------aAAACTTCCAAAATCAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60800 156 + 80219 caatgtcaatttcctgatttt-gcaatgcactagg-----ttgagttagaaataatcattg---gggaaagttggctgaaaataatatggtcattctttttaa-tatttttgtaacttcatatgagttaaattattttaaaagaaaa--tattaaa--------------------ttcaaaaaTCAA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144538657 179 - 189454096 caatatcaatatcctgattttggcaacgtactagg-----taaagttatatgtaatcattg---gggaaagttggctgaaaataacacagtcattctttttac-tatttttgtaacttcttacgagtcaaattctttaaaaataaaaGTTATTAAACAAACACAAAAATCTAAAAGTTCCCAAATCAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653333 179 + 39453387 caatgtcaatatcctgattttggcaacgtactagg-----taaagttatatgtaatcattg---gggaaagttggctgaaaataacacagtcattctttttac-tatttttgtaacttcttacgagtcaaattctttaaaaataaaaGTTATTAAACAAACACAAAAATCTAAAAGTTCCCAAATCAA i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5273494 179 + 48547382 caatgtcaatatcctgattttggcaacgtactagg-----taaagttacatgtaatcattg---gggaaagttggctgaaaataacacagtcattccttttac-tatttttgtaacttcttacgagtcaaattcttcaaaaataaaaGTTATTAAACAAACACAAAAATCTAAAAGTTCCCAAATCAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 46892 179 + 294823 caatgtcaatatcctgattttgacaacgtactagg-----taaagttacatgtaatcattg---gggaaagttggctgaaaataacacagttattctttttac-tatttttgtgacttcttaatagtcaaattctttaaaaataaaaGTTATTAAACAAACACAAAAATCTAAAAGTTCCCAAATCAA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319620 179 + 12320365 caatgtcaatatcctgattttggcaacgtgctagg-----taaagtcacatataatcattg---gggaaagttggctgaaaaaaacatggtcattctttttac-tatttttgtaacttcttacaagtcaaattctttaaaaataaaaGTTATTAAGCAAACACAAAAGTCTAAAAGTTCCCAAATCAA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 45075700 170 - 190850796 ctacgtcaattgcctgattttgtcaatatactagt-----ttaagttag----aattactg---gggaaagttggctgaaaataacatggtcattctttttat-tatttttgtaacttcttgtgagtaaaattattt-----TTTAAAGTATTAAACAAAGACAAAAATCGAAAAGTTCTAAAAtcaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 478000 162 - 15139346 caatgtcaattgcctgatt------------tagg-----ttaagtcagatataatcactg---gggaaagttggctgaaaataacacagtcattctttttac-tatttttgtaacttcttattagtaaaattattt-----ttaaaAGTATTAAACAAAGACAAAAATGTAAAAGTTCTAAAAtcaa i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 1773588 170 - 11631747 caatgtcaattgccggattttggcaatatactagg-----ttaagttagatataatcactg---gggaaagttggctgaaaataacacgggcattctttttac-tatttttgtaacttcttatgagtaaaattattt-----ttaaaAGTATT----AAAGACAAAaatctaaaagttctaaaatcaa i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 41448502 187 + 63241923 caatgtccatttcctggtttgggcaatctgttatgaatatgtaagtaagatatgattattgtgaggggaggctggttgtagataccacattaattctctttac-gatttttacaactgcttatgagtcaaattattttaaaataaaaTAGCGTTGGAAGAGAAAAAaattgaaaagttctgaaatcaa i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I a score=615648.000000 s hg38.chr9_KI270719v1_random 157140 110 + 176845 AGCcc-------------------------atatgaatttggac---atatgatttgatttcttttgtagac------------------cttgatttcttcacctgtaaaaatggaataatagtatgattcctatctcat--tattgtcatgcttaa s panTro5.chr20 31534937 110 + 66533130 AGCcc-------------------------atatgaatttggac---atattatttgatttcttttgtagac------------------cttgatttcttcacctgtaaaaatggaataatagtatgattcctatctcat--tattgtcatgcttaa i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73656 110 - 87586 AGCcc-------------------------atatgaatttggac---atattatttgatttcttttgtagac------------------gttgatttcttcacctgtaaaaatggaataatagtatgattcctatctcat--tattgtcatgcttaa i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644821 125 + 85365473 AGCCC-------------------------ATATGAATTTGGAC---ATATTATTTGATTTCTTTTGTAgaccttgatttcttcacctgtcttgatttcttcacctgtaaaaatgg---aatagcatgatgcctatctcat--tattgtcatgcttaa i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 60956 110 + 80219 AGCcc-------------------------atatgactttggac---atattacttgatttctttcatagac------------------cttgatttcttcacctgtaaaaatggaataatagtaTGATTCATATCTTCT--TATTGTCATGCTTAA i rheMac8.chrUn_NW_014841389v1 C 0 I 55 s macFas5.chr5 144538836 107 - 189454096 ACCCC-------------------------ATATGAATGTGGAC---ATATCATTTGATTTCTTTTGTAGAC------------------CTTGATTTCTTCACCTATAAAAATGG---AATAGTACAATTCCTATCTCAT--TATTGTCATGCTTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653512 107 + 39453387 ACCcc-------------------------atatgaatgtggac---atatcatttgatttcttttgtagac------------------cttgatttcttcacctataaaaatgg---aatagtacaattcctatctcat--tattgtcatgcttac i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5273673 107 + 48547382 ACCCC-------------------------ATATGAATGTGGAC---ATACCATTTGATTTCTTTTGTAGAC------------------CTTGATTTCTTCACCTATAAAAATGG---AATAGTACAATTCCTATCTCAT--TATTGTCATGCTTAC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47071 107 + 294823 ACCcc-------------------------atatgaatgtggac---atatcatttgatttcttttgtagac------------------cttgatttcttcacctataaaaatgg---aatagtacaattcctatctcat--tattgtcatgcttac i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319799 105 + 12320365 ACCcc-------------------------atatgaatgtggac---atattatttgatttcttttgtagac------------------cttgatttcttcacctgtaaaaatgg---aatagtacaattcctatctcat--TATTGTCATGCTT-- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 45075870 129 - 190850796 agcctt-----gttttccttgttatcagtggtatgaatttggac---atattatttgatttcttttgtagac------------------cttgatttcttcacctctaaaaatga-ataatagtgtgatttctatctcat--tattgtcatgcttaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 478162 128 - 15139346 agactt-----gcttttcttgttatcagtggtatgaatttggag---atattatttgatttcttttgtagac------------------cttgatttcttcacctgtaaaaatga-at-atagtgtgagtcctatctcat--tattgtcatgcttaa i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 1773758 129 - 11631747 agcctt-----gtttttcttgttatcagtggtatgaatttggac---atattatttgatttcttttgtagac------------------cttgatttcttcacctgtaaaaacga-ataatcgtgtgattcttatctgat--tattgtcatgcttca i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 41448689 133 + 63241923 -----attgttgctttcttcattattagctgtatgaatttgagtgtagtattattcaacatcttatctaggc------------------ctcagtttcctcacct-taaaattgagttaatagcatgatttgtactctatagtattgctatgacta- i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I a score=99096.000000 s hg38.chr9_KI270719v1_random 157250 17 + 176845 atCATACCA-CTTATGTA s panTro5.chr20 31535047 17 + 66533130 atcatacca-cttatgta i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73766 17 - 87586 atcatacca-cttaagta i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644946 17 + 85365473 atcatacca-tttatgta i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144538943 17 - 189454096 ATCATACCA-TTTATGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653619 17 + 39453387 atcatacca-tttatgta i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5273780 17 + 48547382 ATCATACCA-TTTATGTA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47178 17 + 294823 atcatacca-tttatgta i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319904 17 + 12320365 ATCATATCA-TTTATGTA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 45075999 18 - 190850796 atcatatcattttatgta i calJac3.chr3 C 0 I 7 s saiBol1.JH378162 478290 17 - 15139346 atcatacca-tttatgta i saiBol1.JH378162 C 0 I 7 s aotNan1.NW_018493494v1 1773887 17 - 11631747 atcatacca-tttatgta i aotNan1.NW_018493494v1 C 0 n 0 s canFam3.chr13 41448822 17 + 63241923 atcagatag-tatatgta i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I a score=18742.000000 s hg38.chr9_KI270719v1_random 157267 6 + 176845 GGTGCC s panTro5.chr20 31535064 6 + 66533130 agtgcc i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73783 6 - 87586 ggtgcc i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644963 5 + 85365473 agtgc- i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144538960 6 - 189454096 AGTGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653636 6 + 39453387 agtgcc i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5273797 6 + 48547382 AGTGCC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47195 6 + 294823 agtgcC i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319921 6 + 12320365 AGTGCC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 45076024 5 - 190850796 agtac- i calJac3.chr3 I 7 C 0 s saiBol1.JH378162 478314 5 - 15139346 agtac- i saiBol1.JH378162 I 7 C 0 s canFam3.chr13 41448839 6 + 63241923 agtgcc i canFam3.chr13 C 0 n 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I a score=22607.000000 s hg38.chr9_KI270719v1_random 157273 8 + 176845 TGtatata s gorGor5.CYUI01000881v1 73789 8 - 87586 tgtatata i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644968 4 + 85365473 ----tata i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144538966 8 - 189454096 tatatata i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653642 8 + 39453387 taTATATA i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5273803 8 + 48547382 tatatata i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47201 8 + 294823 tatatata i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319927 8 + 12320365 AATATATA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 45076029 8 - 190850796 tgtgtata i calJac3.chr3 C 0 n 0 s saiBol1.JH378162 478319 8 - 15139346 tgtgtata i saiBol1.JH378162 C 0 n 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I e panTro5.chr20 31535070 0 + 66533130 C a score=11305.000000 s hg38.chr9_KI270719v1_random 157281 5 + 176845 tatat s gorGor5.CYUI01000881v1 73797 5 - 87586 tatat i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42644972 5 + 85365473 gatat i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144538974 5 - 189454096 tatat i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653650 5 + 39453387 TATAT i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5273811 5 + 48547382 tatat i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47209 5 + 294823 tatat i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319935 5 + 12320365 TATAT i colAng1.NW_012120821v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e saiBol1.JH378162 478327 0 - 15139346 I e calJac3.chr3 45076037 0 - 190850796 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I e panTro5.chr20 31535070 0 + 66533130 C a score=627.000000 s hg38.chr9_KI270719v1_random 157286 1 + 176845 a s nomLeu3.chr20 42644977 1 + 85365473 a i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144538979 1 - 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653655 1 + 39453387 A i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5273816 1 + 48547382 t i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47214 1 + 294823 a i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319940 1 + 12320365 A i colAng1.NW_012120821v1 C 0 I 15 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e saiBol1.JH378162 478327 0 - 15139346 I e calJac3.chr3 45076037 0 - 190850796 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I e gorGor5.CYUI01000881v1 73802 0 - 87586 C e panTro5.chr20 31535070 0 + 66533130 C a score=1365.000000 s hg38.chr9_KI270719v1_random 157287 1 + 176845 t s nomLeu3.chr20 42644978 1 + 85365473 t i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144538980 1 - 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653656 1 + 39453387 T i macNem1.NW_012011022v1 C 0 I 14 s chlSab2.chr27 5273817 1 + 48547382 t i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47215 1 + 294823 t i manLeu1.NW_012101853v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e saiBol1.JH378162 478327 0 - 15139346 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I e gorGor5.CYUI01000881v1 73802 0 - 87586 C e panTro5.chr20 31535070 0 + 66533130 C a score=623.000000 s hg38.chr9_KI270719v1_random 157288 2 + 176845 gt s nomLeu3.chr20 42644979 2 + 85365473 ct i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144538981 2 - 189454096 at i macFas5.chr5 C 0 I 8 s chlSab2.chr27 5273818 2 + 48547382 at i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47216 2 + 294823 at i manLeu1.NW_012101853v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e saiBol1.JH378162 478327 0 - 15139346 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I e gorGor5.CYUI01000881v1 73802 0 - 87586 C e panTro5.chr20 31535070 0 + 66533130 C a score=3207.000000 s hg38.chr9_KI270719v1_random 157290 7 + 176845 atatata s nomLeu3.chr20 42644981 7 + 85365473 ctatata i nomLeu3.chr20 C 0 C 0 s chlSab2.chr27 5273820 7 + 48547382 atatata i chlSab2.chr27 C 0 I 15 s manLeu1.NW_012101853v1 47218 7 + 294823 atatata i manLeu1.NW_012101853v1 C 0 I 17 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e saiBol1.JH378162 478327 0 - 15139346 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I e macFas5.chr5 144538983 8 - 189454096 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I e gorGor5.CYUI01000881v1 73802 0 - 87586 C e panTro5.chr20 31535070 0 + 66533130 C a score=2664.000000 s hg38.chr9_KI270719v1_random 157297 110 + 176845 catacatatatatgtatgtatatatacatatatatgtatgtatatatacatatatatatgtatgtatatatacatatatatgtgggtgtgtgtatatatatatatatata s nomLeu3.chr20 42644988 99 + 85365473 gatatagatatagatatctatagctatagatatag------atatctatagctatagatatagctatagatacagatatctatagatatctgtatctatatctat----- i nomLeu3.chr20 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e saiBol1.JH378162 478327 0 - 15139346 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e manLeu1.NW_012101853v1 47225 17 + 294823 I e chlSab2.chr27 5273827 15 + 48547382 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I e macFas5.chr5 144538983 8 - 189454096 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I e gorGor5.CYUI01000881v1 73802 0 - 87586 C e panTro5.chr20 31535070 0 + 66533130 C a score=91.000000 s hg38.chr9_KI270719v1_random 157407 1 + 176845 t s panTro5.chr20 31535070 1 + 66533130 t i panTro5.chr20 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e saiBol1.JH378162 478327 0 - 15139346 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e manLeu1.NW_012101853v1 47225 17 + 294823 I e chlSab2.chr27 5273827 15 + 48547382 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I e macFas5.chr5 144538983 8 - 189454096 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I e nomLeu3.chr20 42645087 0 + 85365473 C e gorGor5.CYUI01000881v1 73802 0 - 87586 C a score=273.000000 s hg38.chr9_KI270719v1_random 157408 1 + 176845 a s panTro5.chr20 31535071 1 + 66533130 a i panTro5.chr20 C 0 C 0 s saiBol1.JH378162 14659874 1 + 15139346 a i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e manLeu1.NW_012101853v1 47225 17 + 294823 I e chlSab2.chr27 5273827 15 + 48547382 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I e macFas5.chr5 144538983 8 - 189454096 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I e nomLeu3.chr20 42645087 0 + 85365473 C e gorGor5.CYUI01000881v1 73802 0 - 87586 C a score=9557.000000 s hg38.chr9_KI270719v1_random 157409 31 + 176845 tatatatatatatatatatacacacccacac s panTro5.chr20 31535072 31 + 66533130 tatatatatatatatacacacacacacacac i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73802 31 - 87586 tatatatatatatatatatataCACACACAC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645087 7 + 85365473 ------------------------CATTCAT i nomLeu3.chr20 C 0 C 0 s saiBol1.JH378162 14659875 31 + 15139346 cacccacatacacacacatgcacacacacac i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e papAnu3.chrUn_NW_003882528v1 30095 5531 - 38561 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e manLeu1.NW_012101853v1 47225 17 + 294823 I e chlSab2.chr27 5273827 15 + 48547382 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I e macFas5.chr5 144538983 8 - 189454096 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I a score=3662.000000 s hg38.chr9_KI270719v1_random 157440 25 + 176845 atatatctatatatatGACTGACTT s panTro5.chr20 31535103 25 + 66533130 atatacctatatatatGACTGACTT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73833 25 - 87586 ACATATCTATATATATGACTGACTT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645094 13 + 85365473 TCAATCCAATAGA------------ i nomLeu3.chr20 C 0 C 0 s papAnu3.chrUn_NW_003882528v1 35626 15 - 38561 acacGTCTATATATA---------- i papAnu3.chrUn_NW_003882528v1 I 5531 C 0 s saiBol1.JH378162 14659906 7 + 15139346 --------aTATATA---------- i saiBol1.JH378162 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e aotNan1.NW_018493494v1 1773904 0 - 11631747 I e cebCap1.NW_016107603v1 3306091 0 - 3802414 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e manLeu1.NW_012101853v1 47225 17 + 294823 I e chlSab2.chr27 5273827 15 + 48547382 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I e macFas5.chr5 144538983 8 - 189454096 I e rheMac8.chrUn_NW_014841389v1 61066 55 + 80219 I a score=4501.000000 s hg38.chr9_KI270719v1_random 157465 2 + 176845 TG s panTro5.chr20 31535128 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73858 2 - 87586 TG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61121 2 + 80219 TG i rheMac8.chrUn_NW_014841389v1 I 55 C 0 s papAnu3.chrUn_NW_003882528v1 35641 1 - 38561 -G i papAnu3.chrUn_NW_003882528v1 C 0 I 1 s saiBol1.JH378162 14659913 2 + 15139346 TG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494614 2 + 3802414 TG i cebCap1.NW_016107603v1 I 40 C 0 s aotNan1.NW_018493494v1 9856709 2 + 11631747 TG i aotNan1.NW_018493494v1 I 42 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e manLeu1.NW_012101853v1 47225 17 + 294823 I e chlSab2.chr27 5273827 15 + 48547382 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I e macFas5.chr5 144538983 8 - 189454096 I e nomLeu3.chr20 42645107 0 + 85365473 C a score=6640.000000 s hg38.chr9_KI270719v1_random 157467 3 + 176845 ACT s panTro5.chr20 31535130 3 + 66533130 ACT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73860 3 - 87586 ACT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61123 3 + 80219 ACT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144538991 3 - 189454096 AGA i macFas5.chr5 I 8 C 0 s papAnu3.chrUn_NW_003882528v1 35643 3 - 38561 ACT i papAnu3.chrUn_NW_003882528v1 I 1 N 0 s saiBol1.JH378162 14659915 3 + 15139346 ACT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494616 3 + 3802414 ACT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9856711 3 + 11631747 ACT i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e manLeu1.NW_012101853v1 47225 17 + 294823 I e chlSab2.chr27 5273827 15 + 48547382 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I e nomLeu3.chr20 42645107 0 + 85365473 C a score=8633.000000 s hg38.chr9_KI270719v1_random 157470 3 + 176845 GAC s panTro5.chr20 31535133 3 + 66533130 GAC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73863 3 - 87586 GAC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645107 3 + 85365473 GAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61126 3 + 80219 GAC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144538994 3 - 189454096 GAT i macFas5.chr5 C 0 C 0 s saiBol1.JH378162 14659918 3 + 15139346 GAC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494619 3 + 3802414 GAC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9856714 3 + 11631747 GAC i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e calJac3.chr3 45076037 0 - 190850796 I e colAng1.NW_012120821v1 4319941 15 + 12320365 I e manLeu1.NW_012101853v1 47225 17 + 294823 I e chlSab2.chr27 5273827 15 + 48547382 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I e macNem1.NW_012011022v1 3653657 14 + 39453387 I a score=14196.000000 s hg38.chr9_KI270719v1_random 157473 2 + 176845 TT s panTro5.chr20 31535136 2 + 66533130 TT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73866 2 - 87586 TT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645110 2 + 85365473 TT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61129 2 + 80219 TT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144538997 2 - 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653671 2 + 39453387 TT i macNem1.NW_012011022v1 I 14 C 0 s chlSab2.chr27 5273842 2 + 48547382 TT i chlSab2.chr27 I 15 C 0 s manLeu1.NW_012101853v1 47242 2 + 294823 TT i manLeu1.NW_012101853v1 I 17 C 0 s colAng1.NW_012120821v1 4319956 2 + 12320365 TT i colAng1.NW_012120821v1 I 15 C 0 s saiBol1.JH378162 14659921 2 + 15139346 TT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494622 2 + 3802414 TT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9856717 2 + 11631747 TT i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 41448845 0 + 63241923 I e calJac3.chr3 45076037 0 - 190850796 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I a score=121241.000000 s hg38.chr9_KI270719v1_random 157475 21 + 176845 AGGTCTATGATTTAAGGTGCG s panTro5.chr20 31535138 21 + 66533130 AGGTCTATGATTTAAGACGTG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73868 21 - 87586 AGGTCTATGATTTAAGATGTG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645112 21 + 85365473 AGGTCTGTGAGTAAAGAAGCG i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61131 21 + 80219 AGGTCTATGACTTAAGATGCG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144538999 21 - 189454096 AGGTCTATGAGTAAAGAAGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653673 21 + 39453387 AGGTCTATGAGTAAAGAAGCA i macNem1.NW_012011022v1 C 0 C 0 s chlSab2.chr27 5273844 21 + 48547382 AGGTCTATGAGTAAAGAAGCA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47244 21 + 294823 AGGTCTATGAGTAAAGAAGCA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319958 21 + 12320365 AGGTCTATGAGTAAAGAAGCA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14659923 21 + 15139346 AGGTTTATGATTTAAGAAGCA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494624 21 + 3802414 AGGTTTACGATTTAAGAAGTG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9856719 21 + 11631747 AGGTTTATGATTTAAGAAGTG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21791111 21 - 63241923 AGGTCTATCACTTAGAAGGTG i canFam3.chr13 I 13 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e calJac3.chr3 45076037 0 - 190850796 I e cerAty1.NW_012002843v1 1272276 440 + 25348628 I a score=1551715.000000 s hg38.chr9_KI270719v1_random 157496 205 + 176845 -GAAATTGGAATTTACCAGAACATTTGTGAATTGATTTGTTCTTATGCTTCACCAAC-TGTCATGGTAAAGGACACCTTAGCCCCAGCTCATAGTATGAAAACATGTAAATGCTTCTATGTGCCCTAAATTTCTCTTGGTTAAGCTTTATAC------TTTTT--TTTGTTTATGACACAGAAATATGATCACAAAGCACATGTGTACCACGATA s panTro5.chr20 31535159 205 + 66533130 -GAAATTGGAATTTACTAGAACATTTGTGAATTGATTTGTTCTTATGTTTCACCAAC-CGTCATGGTAAAGGACACCTTAGCCCCAGTTCATAGTATGAAAATACATAAATGCTTCTATGTGCCCTAAATTTCTCTTGGTTAAGCTTTATAC------ATTTT--TTTGTTTATGACACAGAAATATGATCACAAAGCACATGTGTACCACAATA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 73889 206 - 87586 -GAAATTGGAATTTACCAGAACATTTGTGAATTGATTTGTTCTTATGCTTCACCAAC-TGTCATGGTAAAGGACACCTTAGCCCCAGCTCATAGTATGAAAACACGTAAATGCTTCTATGTGCCCTAAATTTCTCTTGGTTAAGCTTTATAC-A----TTTTT--TTTGTTTATGACACAGAAATATGATCACAAAGCACATGTGTACCACAATA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645133 207 + 85365473 -GAAATTGGaatttaccagaacacttgtgaattgagttgttcttatgcttcaccaac-tgtcatagtaaagaacaccttagccctagtacatagtatgaaaatacataaatgcttctatgtgccctaaatttctctctgttaagctttatagaa----tattt--ttTGTTTATGACACAGAAATATGGTCACAAAGCACAGTTGTACCATAATA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61152 211 + 80219 -GAAATTGGAATTTACCAGAACATTTGTGAATTGATTTGTTCTTATGTTTCACCAAC-TGTCATGGTAAAGGACACCTTAGCCCTAGTACATAGTATGAAAATACATAAATGCTTCTATTTGCCATAAATTTCTCTTGGTTAAGCTTTATAGAGTTTTTTTTT--TTTGTTTATGACATAGAAATATGACCACAAAGCACATGTGTACCACAATA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144539020 207 - 189454096 -GAAATTGgaatttaccagaacatttgtgaacttattttttcttgtgcttcaccaac-tgtcatggtaaagaacaccttaaccctagtacatagtatgaaaatacatacatgcttctatgtgccttaaatttctctttgttaagctttatagaa----tgttt--ttTGTTTGTGACACAGTAATATGGTCACAAAGCACATGAGTAGCATAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653694 207 + 39453387 -GAAATTGGAATTTACCAGAACATTTGTGAACTTATTTTTTCTTGTGCTTCACCAAC-TGTCATGGTAAAGAACACCTTAACCCTAGtacatagtatgaaaatacatacatgcttctatgtgccttaaatttctctttgttaagccttatagaa----tgttt--tttgtttgtgacacagaaatatggtcacaaagcacatgagtagcataata i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1272716 207 + 25348628 -GAAATTGgaatttaccagaacatttgtgaacttattttttcttgtgcttcaccaac-tgtcatggtaaagaacaccttaaccctagtacatagtatgaaaatacatacatgcttctatgtgccttaaatttctctttgttaagctttatagaa----tgttt--tttgtttgtgacacagaaatatggtcacaaagcacatgagtagcataata i cerAty1.NW_012002843v1 I 440 C 0 s chlSab2.chr27 5273865 207 + 48547382 -GAAATTGgaatttaccagaacatttgtgaacttattttttcttgtgcttcaccaac-tgtcatggtaaagaacaccttaatcctagtacatagtatgaaaatacatacatgcttctatgtgccttaaatttctctttgttaagctttatagaa----tgttt--ttTGTTTGTGACACAGAAATATGGTCACAAAGCACATGAGTAGCATAATA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47265 207 + 294823 -GAAATTGgaatttaccagaacatttgtgaacttattttttcttgtgcttcaccaac-tgtcatggtaaagaacaccttaaccctagtacatagtatgaaaatacatacatgcttctatgtgccttaaatttctctttgttaagctttatagaa----tgttt--tttGTTTGTGACACAGAAATATGGTCACAAAGCACATGAGTAGCATAATA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4319979 205 + 12320365 -GAAATTGgaatttaccagaacatttgtgaacttattttttcttgtgcttcaccaac-tgtcatggtaaagaacaccttaaccctagtacatagtatgaaaatacatacatatttctatgtgccttaaatttctctttgttaagctttatagaa----tgttt--tatgtttgtgac--agaaatatggtcacaaagcacataagtagcataata i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14659944 206 + 15139346 -AAAATTGgaatttaccagaatatttgtgaattgatttgttcttatgcttcaccaacttttcatagtagagaacaccttaggcctagtacacagtatgaaaatatgtaaatgctactatgtgccctaaatttctctctgttaagcttcatagaa----tgttt----tGTTAATAACACAGAAATATGATCACAAAGCACATGTGTACCATAATA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494645 205 + 3802414 -AAAATTGgaatttaccagaatatttgtgaattgatttgttcttatgcttcaccaac-tctcatgacagagaacaccttaggcctagtacacagtatgaaagtatgtaaatgcttctatgagccctaaaattctctctgttaagcttcatagaa----tgttt----tGTTAATGACACAGAAATATGGTCACAAAACACATGTGTACCATAATA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9856740 205 + 11631747 -AAAATTGgaatttaccagaatatttgtgaattgatttgttcttatgcttcaccaac-tctcatgatagagaacaccttaggcctagtacacagtatgaaagtatgtaaatgcttctatgtgccctaaatttctctctgttaagcttcatagaa----tgttt----tgttAATGACACAGAAATATGGTCACAAAGCACATATGTACCATAATA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21791132 199 - 63241923 AAGATTTATAATTTACCAAAACATTTGTGAGCCAGTTTGTTCTTATGCTTCACTAAC-TCTCATGGTAAAGCCTCCTTTAGCCCTAGAACACACTGTCAGAA----TAAATGTTTTTTTGCATCCTGAATTTATTCCTTTGGAGCTTCACAGGA----TGTTCCCTTTCCCTATGATACAGAAATATGGTCACAAAGTG-------AGCACAGTA i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e panPan2.chr4 227318 61528 - 195804263 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e calJac3.chr3 45076037 0 - 190850796 I a score=1154832.000000 s hg38.chr9_KI270719v1_random 157701 125 + 176845 -CAAA--TTTCATGTATTTTGTCTC--TGTATTATGTTTTCTTTCCATTTATGTCTTTTCAAGCTAACAATTCCTGATC-----------TCCTAATACAGTGGGCCTTTCAAGCACTTACTTCTTTAGATAGTCATGTTC s panTro5.chr20 31535364 125 + 66533130 -CAAA--TTTCATGTATTTTGTCTC--TGCATTATGTTTTCTTTCCATTTATGTCTTTTCAAGCTAACAATTCCTAATC-----------TCCTAATACAGTGGGCCTTTCAAGCACTTACTTCTTTAGATAGTCATGTTC i panTro5.chr20 C 0 C 0 s panPan2.chr4 288846 125 - 195804263 -CAAA--TTTCATGTATTTTGTCTC--TGCATTATGTTTTCTTTCCATTTATGTCTTTTCAAGCTAACAATTCCTAATC-----------TCCTAATACAGTGGGCCTTTCAAGCACTTACTTCTTTAGATAGTCATGTTC i panPan2.chr4 I 61528 C 0 s gorGor5.CYUI01000881v1 74095 125 - 87586 -CAAA--TTTCATGTATTTTGTCTC--TGTATTATGTTTTCTTTCCATTTATGTCTTTTCAAGCTAACAATTCCTAATC-----------TCCTAATACAGTGGGCCTTTCAAGCACTTACTTCTTTAGATAGTCATGTTC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645340 127 + 85365473 -CAAA--TTTCATGTATTTTGTCTCTTTGTATTAGGTTTTCTTTCCATTTATGTCTTTTCAAGTGAACGATTCCTAATC-----------TCCTAATACAGTGGGCCTTTCAAGCACTTACTTCTTTGGATAATCATGTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61363 127 + 80219 -TAAA--TTTCATGTATTTTGTCTCTTTGTATTATGTTTTCTTTCCATTTACCTCTTTTCAAGCTAACAATTCCTCATC-----------TCCTAATACAGTGGGCCTTCCAAGCACTAACTTCTTTAGACAGTCATGTTC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144539227 127 - 189454096 -CAAA--TTTCATGTATTTTGTCTCTTTGTATTGTGTTTTCTTTCCATTTGTGTCTTTTCAAGCTAACGATTCCTAATC-----------TCTTAATACAGTGGGCCTCTCAAGCACTTACTTCTTTGGATAATCATGTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3653901 127 + 39453387 -caaa--tttcatgtattttgtctctttgtattgtgttttctttccatttgtgtcttttcaagctaacgattcctaatc-----------tcttAATACAGTGGGCCTCTCAAGCACTTACTTCTTTGGATAATCATGTTC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1272923 127 + 25348628 -caaa--tttcatgtattttgtctctttgtattgtgttttctttccatttgtgtcttttcaagctaacgattcctaatc-----------tcttAATACAGTGGGCCTTTCAAGCACTTACTTCTTTGGATAATCATGTTC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274072 127 + 48547382 -CAAA--TTTCATATATTTTGTCTCTTTGTATTGTGTTTTCTTTCCATTTGTGTCTTTTCAAGCTAATGATTCCTAATC-----------TCTTAATACAGTGGGCCTTTCAAGCACTTACTTCTTTGGATAATCATGTTC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47472 127 + 294823 -CAAA--TTTCATGTATTTTGTCTCTTTGTATTATGTTTTCTTTCCATTTACGTCTTTTCAAGCTAACAGTTCCTCATC-----------TCCTAATACAGTGGGCCTTTCAAGCACTTACTTCTTTGGATAATCATGTTC i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320184 127 + 12320365 -caaa--tttcatgtattttgtctctttgtattgtgttttctttctgtttgtgtcttttcaagctaacaattcctaatc-----------tcttAATACAGTGGGAGTTTCAAGCACTTACTTCTTTGGATAATCATGTTA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660150 127 + 15139346 -TAAA--CTTCATGCATTTTGTCTCTTTGTATTATGTTTTCTTTCCATTTATGTCTTTTCAAGGTAACAATTCCTAATC-----------TCCTAATAAAATGAGCCTTCCAAGCACTTACTTCTTTGGATAATCATGTTC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494850 127 + 3802414 -TAAA--TTTCATGCATTTTGTCTCTTTGTATTATGTTTTCTTTCCATTTATGTCTTTTCAAGGTAACAATTCCTGATC-----------TCCTAATACAATGGGCCTTCCAAGCACTTACTTCTTTGGATAATCATGTTA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9856945 127 + 11631747 -TAAA--TTTCATGCATTTTGTCTCTTTGTATTATGTTTTCGTTCCATTTATGTCTTTTCAAGATAACAATTCCTAATC-----------TCCTAATACAATGGGCCTTCCAAGCACTTACTTCTTTGGATAATCATGTTC i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21791331 140 - 63241923 TCAAGCCTTTCTGATATTCCGTCCCCTTTCATTTTATTTTCTTTCCATTTTCATCTTTTCAAAATGAGCACTCCTAGCCTCTCTAGTCAGTCCTACTAGAATGGGCCTTCTGGGAACT-ACTTATTTCCACAATCGTGTTC i canFam3.chr13 C 0 I 518 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e calJac3.chr3 45076037 0 - 190850796 I a score=678071.000000 s hg38.chr9_KI270719v1_random 157826 77 + 176845 TTTTAACTAGGATCTCACAGATAAAGTTATCAAAGCATGGAAAAGGATGAAGAAA--CTTGACTCCTTCCCCTCTCCAT s panTro5.chr20 31535489 77 + 66533130 TTTTAACTAGAATCCCACAGATAAAGTTATCAAAGCATGGGAAAGGATGAAGAAC--CTTGACTCCTTCCCCTCTCCAT i panTro5.chr20 C 0 C 0 s panPan2.chr4 288971 77 - 195804263 TTTTAACTAGAATCCCACAGATAAAGTTATCAAAGCATGGGAAAGGATGAAGAAC--CTTGACTCCTTCCCCTCTCCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 74220 77 - 87586 TTTTAACTAGGATCTCACAGATAAAGTTATCAAAGCATGGAAAAGGATGAAGAAC--CTTGACTCCTTCCCCTCTCCAT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645467 77 + 85365473 TTTTAACCAGAATCCCACAGATAAAGTTATCAAAGCAAGGAAAAGGAAGAATAAC--CTTGACTCCTTCCCCTCCACAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61490 73 + 80219 TTTTAACTGGAAT-CCACAGATAAAGTTATGAAAGCATGGAAAAGGATG---AAC--CTTGACTCCTTCCCCTCTCCAT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144539354 77 - 189454096 TTTTAACTGGAATCCCACAGATAAAGTTATCAAAGCATGGAAAAGGAAGAATAAC--CTTCACTCCTTCTCCTCTCCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3654028 77 + 39453387 TTTTAACTGGAATCCCACAGATAAAGTTATCAAAGCATGGAAAAGGAAGAATAAC--CTTCACTCCTTCTCCTCTCCAT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1273050 77 + 25348628 TTTTAACTGGAATCCCACAGATAAAGTTATCAAAGCATGGAAAAGGAAGAATAAC--CTTCACTCCTTCTCCTCTCCAT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274199 77 + 48547382 TTTTAACTGGAATCCCACAGATAAAGTTATCAAAGCATGGAAAAGGAAGAATAAC--CTTCACTCCTTCTCCTCTCCAT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47599 77 + 294823 TTTTAACTGGAATCCCACAGATAAAGTCATCAAAGCATGGAAAAGGAAGAATAAC--CTTCACTCCTTCTCCTCTCCAT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320311 77 + 12320365 TTTTACCTAGAATCCCATAGATAAAGTTATCAAAGCATGGAAAAGGAAGAATAAC--CTTGACTCCTTCTCCTCTCCAT i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660277 77 + 15139346 TTTTAACTAGAATCCCACAGATAAAGTTATCAAAGTATGGAAAAAGATGAAGAAT--CTTGATTCCTTTCTCTCTCCAT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 494977 77 + 3802414 TTTTAACTAGAACCCCACAGATAAAGTTATCAAAGTATGGAAAAAGATGAAGAAT--CTTGATTCCTTCCTCTCTCCAT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9857072 77 + 11631747 TTTTAACTAGAATCCCACAGATAAAGTTATCAAAGTATGGAAAAAGATGAAGAAT--CTTGATTCCTTTCTCTCTCCAT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21791989 74 - 63241923 tttTAACTAGAATCGCACAG----AGTTATCAATGCATGGCAGAGAGGGAAGAAATGTTTGACACCATC-CCTCTTCAC i canFam3.chr13 I 518 C 0 e eulMac1.LGHX01003349v1 64097 179 + 138336 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e calJac3.chr3 45076037 0 - 190850796 I a score=65537.000000 s hg38.chr9_KI270719v1_random 157903 7 + 176845 CCCCCAC s panTro5.chr20 31535566 7 + 66533130 CCCCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr4 289048 7 - 195804263 CCCCCAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 74297 7 - 87586 CCCCCAC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645544 7 + 85365473 CTCCCAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61563 7 + 80219 CCCCCAT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144539431 7 - 189454096 CTCCCAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3654105 7 + 39453387 CTCCCAC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1273127 7 + 25348628 CTCCCAC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274276 7 + 48547382 CTCCCAC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47676 7 + 294823 CTCCCAC i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320388 7 + 12320365 CTCCCAC i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660354 7 + 15139346 CCCCCAT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 495054 7 + 3802414 TCCCCAT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9857149 7 + 11631747 CCCCCAT i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 122465 7 + 330844 CCTCCAC i eulMac1.LGHX01003138v1 I 59716 I 1456 s canFam3.chr13 21792063 7 - 63241923 TTTTCAT i canFam3.chr13 C 0 C 0 e tarSyr2.KE948818v1 242697 90 - 1045278 I e calJac3.chr3 45076037 0 - 190850796 I a score=37794.000000 s hg38.chr9_KI270719v1_random 157910 4 + 176845 TAAA s panTro5.chr20 31535573 4 + 66533130 TGAA i panTro5.chr20 C 0 C 0 s panPan2.chr4 289055 4 - 195804263 TGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 74304 4 - 87586 TAAA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645551 4 + 85365473 TGAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61570 4 + 80219 TGAA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144539438 4 - 189454096 TGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3654112 4 + 39453387 TGAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1273134 4 + 25348628 TGAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274283 4 + 48547382 TGAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47683 4 + 294823 TGAA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320395 4 + 12320365 TAAA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660361 4 + 15139346 TGAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 495061 4 + 3802414 CGAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9857156 4 + 11631747 TGAA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21792070 4 - 63241923 TGAA i canFam3.chr13 C 0 I 36 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e calJac3.chr3 45076037 0 - 190850796 I a score=112933.000000 s hg38.chr9_KI270719v1_random 157914 18 + 176845 TTAAATTCATCCCAACCT s panTro5.chr20 31535577 18 + 66533130 TTCAATTCATCCCAACTT i panTro5.chr20 C 0 C 0 s panPan2.chr4 289059 18 - 195804263 TTCAATTCATCCCAACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 74308 18 - 87586 TTCAATTCGTCCCAACCT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645555 18 + 85365473 TTCAATTGGGCCCAACCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61574 18 + 80219 TTCAGTTTGGCCCAAACT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144539442 18 - 189454096 TTCAACTGGGTCCAAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3654116 18 + 39453387 TTCAACTGGGTCCAAACT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1273138 18 + 25348628 TTCAACTGGGTCCAAACT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274287 18 + 48547382 TTCAACTGGGTCCAAACT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47687 18 + 294823 TTCAACTGGGTCCAAACT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320399 18 + 12320365 TTCAACTGGGTCCAAACT i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660365 18 + 15139346 TTAAACTGGGCCCAATCT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 495065 18 + 3802414 TTCAACTGGGCCCAATCT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9857160 18 + 11631747 TTCAACTGGGCCTAATTT i aotNan1.NW_018493494v1 C 0 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 21792074 36 - 63241923 I e calJac3.chr3 45076037 0 - 190850796 I a score=4332273.000000 s hg38.chr9_KI270719v1_random 157932 537 + 176845 TGTATTTG--TTTTGTTCTCCTGGAAAAGAAAAT-ATAGTCATCACCCTCAATAAATATACAATCTAGTTAGAGAGATATGACTTCAGAGAAGG--ATTTCTTAGTTTTGATTTTGATTATCTT-CCTTTAGATATTTGGAAAGACAAAAATGCTGTATGCTTATGGACTGCAAGCAG-TATGAGTGGAAAACAAAAGTAATAAATGTTACTTCTGACTTTATTATAATGTTAGGATTGTTAATAGTTAACAATTACTTACTGAAGGAAGATTTAAATTGAATAT---------------------------------------------------------------TTCTAAATGGGA-------------------------------------------------------------------------------AAAATTTAAAAAGCAGGTGAGTCCATAAATTTTAGGACCCAGAATCTAC----------TGAGCTAAAAACTCAATGAGAGTTAATTCTCTGTTGGTGATGTAGCAATTCTTGAGGTTATTTGTGAAGACTCACATGAGAGCTAAACAATAAAAGAGGACTGAGACCATTTCAAGGGATGGAGAACACCTTCCTTTCTTGTTCAGATGATGCTCTGAGACATTGCTGTTTATTTTGACTGCCTCTTTTTAAACAAAC s panTro5.chr20 31535595 533 + 66533130 TGTATTTG--TTTTGTTCTTCTGGAAAAGaaaat-atagtcatcaccctcaataaatatacaatctagttagagtgatatgactTCAGAGTAGG--ATTTCTTAGTTTTGATTTTGATTATCTT-CCTTTAGATATTTGGAAAGACCAAAATGCTGTATGCTTAAGGACTGCAAGCAG-TATGAGTGGAAAACAAAAGTAATAAATGTTACTTATGACTTTATTATAATGTTAGGATTGTTAATAGTTAAC----ACTTACTGAAGGAAGATTTAAATTGAATAT---------------------------------------------------------------TTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGGTGAGTCCCTAAAGTTTAGGAcccagaatctac----------tgagctaaaaactcaatgagagttaattctctattggtgttgtagcaatccttgaggttattTGTGAAGACTCACATGAGAGCTAAACAATAAAAGAGGACTGAGACCATTTCAAGGGATGGAGGACACCTTACTTTCTTGTTCAGATGATGCTCCGAGACATTGCTGTTTATTTTGACTCCATCTTTTTAAACAAAC i panTro5.chr20 C 0 C 0 s panPan2.chr4 289077 533 - 195804263 TGTATTTG--TTTTGTTCTTCTGGAAAAGaaaat-atagtcatcaccctcaataaatatacaatctagttagagtgatatgactTCAGAGTAGG--ATTTCTTAGTTTTGATTTTGATTATCTT-CCTTTAGATATTTGGAAAGACCAAAATGCTGTATGCTTAAGGACTGCAAGCAG-TATGAGTGGAAAACAAAAGTAATAAATGTTACTTATGACTTTATTATAATGTTAGGATTGTTAATAGTTAAC----ACTTACTGAAGGAAGATTTAAATTGAATAT---------------------------------------------------------------TTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGGTGAGTCCATAAAGTTTAGGAcccagaatctac----------tgagctaaaaactcaatgagagttaattctctattggtgttgtagcaatccttgaggttattTGTGAAGACTCACATGAGAGCTAAACAATAAAAGAGGACTGAGACCATTTCAAGGGATGGAGGACACCTTACTTTCTTGTTCAGATGATGCTCTGAGACATTGCTGTTTATTTTGACTCCATCTTTTTAAACAAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 74326 536 - 87586 TGTATTTG--TTTTATTCTTCTGGAAAAGaaaat-atagtcatcaccctcaataaatatacaatctagttagagagatatgactTCAGAGTAGG--ATTTCTTAGTTTTGATTTTGTTTATCTT-CCTTTAGATATTTGGAAAGACCAAAATGCTGTATGCTTATGGACTGCAAGCAG-TATGAGTGGAAAACAAAAGTAATAAATGTTACTTCTGACTTTATTATAATGTTAGGATTGTTAATAGTTAACAATTGC-TACTGAAGGAAGATTTAAATTGAATAT---------------------------------------------------------------TTCTAAATGGGA-------------------------------------------------------------------------------AAAATTTAAAAAGCAGTTGAGTCCATAAATTTTAGGACCCAGAATCTAC----------TGAGCTAAAAACTCAATGAGAGTTAATTCTCTGTTGGTGTTGTAGCAATTCTTGAGGTTATTTGTGAAGACTCACATGAGAGCTAAACAATAAAAGAGGACTGAGACCATTTCAAGGGATGGAGAACACCTTCCTTTCTTGTTCAGATGATGCTCTGAGACATTGCTGTTTATTTTGACTGCCTCTTTTTAAACAAAC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42645573 538 + 85365473 TGTATTTG--TTTTGTTCTTCTGGAAAAGAAAATAATAGTCATTACTCTCAATAAATATACAACCTAGTTAGGGAGATATGACTTCAGAGTCGG--ATTTCTTAGTTTTGATTTTGATTGTCTTACCTTCAGATATTTGGAAAGGCCAAAATGCAGTATGCTTATGGACCGCAAGCAG-TATGAATAGAAAACAAAAGTAATAAATGTTACTTATGACTTTATTATAATGTTAGGATTGTCAGTAGTTAACAATTACTTAATGAAGGAAGGTTTAAATTGAATAT---------------------------------------------------------------TTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGCTGAGTCAATAAAGTGTAGGTCCCAGAATTTAC----------TGAGCTAAAAACTCAATGAGAATTAATTCCCTATTGGTGTTGTAGCAATTCTTGAGGTTATTTGTGAGGACTCACAGGAGAGCTAAACAATAAAAGAGGACTGAGACAATTTCAAGGGATGGAGAACACCCTCCTTTCTTGTTCAGATGATGCTCTGAGACATTGTCATTTATTTTGACTCCATA-TATTGAACACAC i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 61592 521 + 80219 TGTATTTG--TTTTATTCTTCTGgaaaagaaagt-atagtcattaccctcaataaatatacaatctagttagggagataggactTCAGAGTAGG--ATTTCTTAGTTTTGATTTTGATTATCTTACCTTCAGATATTTGGAAAGACCCAAATGCTGTATGCTTGTGGACTACAAGCAG-TATGAGTGGAAAACAAAAGTAATAAATGTTACTTATGACTTTATTATAATGTTAGGATTGTCAATAGTTAAC----ACTTACTGAAGGAAGATTTAAATTGAATAT---------------------------------------------------------------TTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGGTGAGTCAATAAAGTTTAGGACCCAGAATCTAC----------TGAGATAAAAACTCAATGAGAATTAATTCTCTATTGGTGGTGTAGCAATTCTCGAGGTTATTTTTGAAGACTCACATGAGAGCTAAACAGTAAAAAAGGGCTGAGACCATTTCAAGGGATGGAGAACACCTTCCTTTCTTGTTCAGATGATGCTCTGAGACATTGCCATTTA-------------TTTTTAAACAAAC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144539460 524 - 189454096 TGTATTTGTTTTTTCTTCTTCTGGAAAAGAAAAT-ATAGTCATTACCCTAAATAAATATACAATCTAGTTAGGGAGATATGACTTCAGAGTAGG--AGTTCTTCGTTTTGATTTTGATTATCTTACCTTCAGATATTCGGAAAGGCCAAAATGCTGCATGCTT-TGGACTACAAGCAG-TATGAATGTAAAACAAAAGTAATACATGTTGCTTATGACTTTATTATAACATTAGGATTGTTAGTAGTTGACAATTACTTACTGAAGAAAGGTTTAAATTGAATAT---------------------------------------------------------------CTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGCTGAGTCAATAAAGTTTAGAGCCCAGAATCTAC----------TGAGCTAAAAACTTAATGAGAATTAATTCTCTATTGGTGATGTAGCAATTCCTGAGGTTATTTGTGAGTAATCACAGGAGAGCTAAACA-------------TAGACCATTTCGAGGGATGGAGAACACC-TCCTTTCTTGTTCAGAT-ATGCTCTAAGACATTGCCATTTATTTTGACTCCCTCTTTTTCAACAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3654134 524 + 39453387 TGTATTTGTTTTTTCTTCTTCTGGAAAAGaaaat-atagtcattaccctaaataaatatacaatctagttagggagatatgactTCAGAGTAGG--AGTTCTTCGTTTTGATTTTGATTATCTTACCTTCAGATATTCGGAAAGGCCAAAATGCTGCATGTTT-TGGACTACAAGCAG-TATGAATGTAAAACAAAAGTAATAAATGTTGCTTATTACTTTATTATAACATTAGGATTGTTAGTAGTTGACAATTACTTACTGAAGAAAGGTTTAAATTGAATAT---------------------------------------------------------------CTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGCTGAGTCAATAAAGTTTAGAGCCCAGAATCTAC----------TGAGCTAAAAACTTAATGAGAATTAATTCTTTATTGGTGATGTAGCAATTCCTGAGGTTATTTGTGAGTAATCACAGGAGAGCTAAACA-------------TAGACCATTTCAAGGGATGGAGAACACC-TCCTTTCTTGTTCAGAT-ATGCTCTAAGACATTGCCATTTATTTTGACTCCCTCTTTTTCAACAAAC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1273156 525 + 25348628 TGTATTTGTTTTTTCTTCTTCTGGAAAAGaaaat-atagtcattaccctaaataaatatacaatctagttagggagatatgactTCAGAGTAGG--AGTTCTTCGTTTTGATTTTGATTATGTTACCTTCAGATATTTGGAAAGGCCAAAATGCTGCATGCTT-TGGACTACAAGCAG-TATGAATGTAAAACAAAAGTAATAAATGTTGCTTATGACTTTATTATAACATTAGGATTGTTAGTAGTTGACAATTACTTACTGAAGAAAGGTTTAAATTGAATAT---------------------------------------------------------------CTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGCTGAGTCAATAAAGTTTAGAGCCCAGAATCTAC----------TGAGCTAAAAACTTAATGAGAATTAATTCTCCATTGGTGATGCAGCAATTCCTGAGGTTATTTGTGAGTAATCACAGGAGAGCTAAACA-------------TAGACCATTTCAAGGGATGGAGAACACCCTCCTTTTTTGTTCAGAT-ATGCTCTAAGACATTGCCATTTATTTTGACCCCCTTTTTTTCAACAAAC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274305 525 + 48547382 TGTATTTGTTTTTTCTACTTCTGGAAAAGAAAAT-ATAGTCATTACCCTAAATAAATATACAGTCTAGTTAGGGAGATATGACTTCAGAGTAGG--AGTTCTTAGTTTTGATTTTGATTATCTTACCTTCAGATATTTGGAAAGGCCAAAATGCTGCATGCTT-TGGACTACAAGCAG-TATGAATGTAAAACAAAAGTAATAAATGTTGCTTATGACTTTATTATAACATTAGGATTGTTAGTAGTTGACAATTACTTACTGAAGAAAGGTTTAAATTGAATAT---------------------------------------------------------------CTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGCTGAGTCAATAAAGTTTAGAGCCCAGAATTTAC----------TGAGCTAAAAACTTAATGAGAATTAATTCTCTATTGGTGATGTAGCAATTCCTGAGGTTATTTGTGAGTAATCACAGGAGAGCTAAATA-------------TAGACCATTTCAAGGGATGGAGAACACCCTCCTTTCTTGTTCAGAT-ATGCTCTGAGACATTGGCATTTATTTTGACTCCCTCTTTTTCAACAAAC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 47705 525 + 294823 TGTATTTGTTTTTTCTTCTTCTGGAAAAGaaaat-atagtcattaccctcaataactatacaatctagttagagagataggactaCAGAGTAGG--ATTTCTTAGTTTTGATTTTGATTATCTTACCTTCAGATATTTGGAAAGGCCAAAATGCTGCATGCTT-TGGACTACAAGCAG-TATGAATGTAAAACAAAAGTAATAAATGTTGCTTATGACTTTATTATAACATTAGGATTGTTAGTAGTTGACAATTACTTACTGAAGAAAGGTTTAAATTGAATAT---------------------------------------------------------------CTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGCTGAGTCAATAAAGTTTAGGGCCTAGAATCTAC----------TGAGCTAAAAACTTAATGAGAATTAATTCTCTATTGGTGATGTAGCAATTCCTGAGGTTATTTGTGAGTAATCACAGGAGAGGTAAACA-------------TAGACCATTTCAAGGGATGGAGAACACCCTCCTTTCTTGTTCAGAT-ATGCTCTAAGACATTGCCATTTATTTTGACTCCCTCTTTTTCAACAAAC i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320417 525 + 12320365 TGTGTTTGTTTTTTCTTCTTCCGGAAAAGaaaat-gtagtcattaccctcaataaatatacaatctagttagggagatacgactTCAGAGTAGG--AGTTCTTAGTTTTGATTTTGATTATCTTACCTTCAGATATTTGGAAAGGCCAAAATGCTGCATGCTT-TGGACTACAAGCAG-TATGAATGTAAAACAAAAGTAATAAATGTTACTTATTACTTTATTATAACATTAGGATTGTTAGTAGTTGACAATTACTTACTGAAGAAAGGTTTAAATTCAATAT---------------------------------------------------------------CTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAACTGAGTCAATAAAGTTTAGAGCCCAGAATCTAC----------TGAGCTAAAAACTTAATGAGAATTAATTCTCTATTGGTGATGTAGCAATTCTTGAGATTATTTGTGAGTAATCACAGGAGAGCTAAACA-------------TAGACCATTTCAAGGGATGGAGAACACCCTCCTTTCTTGTTCAGAT-ATGCTCTGAGACATTGCCATTTATTTTGACTCCCTCTTTTTCAACAAAC i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660383 512 + 15139346 TGTATTTG--TTTTCTTCTTGTTGAAAAAAATAT-ATACTAATTACCCTCA--AAATATACAATCTAG-TAGGGCAATATGACTTCAGAGTAGA--ATTTC--AGTTTTGATTTTGATTATCTTACCTTCAGATATTTAGAAAGACCAAAATTCTGTATGCTTATGAACCAGAAGCAG-TATGAATGGAAAACAAATGTAATAAATGTTACTTATTACTTTATTATGATGTTAGGATTGTTAGTAGTTAACAATTACTTCCTAAAGGAAAGTTTAAATTGAATAT---------------------------------------------------------------TTCTAAATGAGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGCTAAGTCAATAACATTTAAGTTCCTGAATCTAC----------TGAGCTAAGAGCTTAATGAGAATTAATTCCCTATAGA---TGTAGCAATTCTTGAGGTTATTTGTAAGGACTCACATGAGAGCTAAAC-----AAGAGGACTGAGAACATTTCAGGACATGGAGAACACTGTCT----TTGTTCAGAT--------GAGACATTGCCATTTATTTTGACTCCCT-TTTTTGAATAAAC i saiBol1.JH378162 C 0 I 4 s cebCap1.NW_016107603v1 495083 521 + 3802414 TGTGTTTG--TTTTCTTCTTCTCGAAAAGaaaat-atagtcattactctca--aaatatacaatctagttagggagatatgactTCGGAGTAGG--ATTTCATAGTTTTGATTTTTATTATCTTACCTTCAGATATTTAGAAAGACCAAAATGCTGTATGCTTCTGAACCACAAGCAG-TATGAATGGAAAACAAAAGTAATACATGTTACTTATGACTTTATTATAATGTTAGGATTGTTAGTAGTTAACAATTACTTCCTAAAGGAAAGTTTAAATTGAGTAT---------------------------------------------------------------TTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAATGCAGCTAAGTCAATAACATTTAGGTCCCTGAATCTAC----------TGAGCTAAAAGCTCAATGAGAATTAATTCCCTATAGGTGTTGTAGCAATTCTTGAGGTAATTTGTAAGGACTAACATGAGAAATAAACA---AAAGAGGACTGAGAACATTTCAGGGCATGGAGAACACCCTCC----TTGTTCAGAT--------GAGACATTGCCATTTATTTTGACTCCCTCTTTTTGAATAAAC i cebCap1.NW_016107603v1 C 0 I 44 s aotNan1.NW_018493494v1 9857178 521 + 11631747 TGTATTTG--TTTTCTTCTTCTTGAAAAGaaaat-agagtcattaccctca--aaatatacagtctagttagggagataagactTCAGAGTAGG--ATTTCATAGTTTTGATTTTGATTATCTTACCTTCAGATATTTGGAAAGACCAAAATGCTGTATGCTTATGAACCACAAGCAG-TATGAATGGAAAACAAAAGTAATAAATGTTACTTATGACTTTATAATAATGTTAGGATTGTTAGTAGTTAACAATTACTTCCTAAAGGAAAGTTTAAATTGAAAAT---------------------------------------------------------------TTCTAAATGGGA-------------------------------------------------------------------------------AAATTTTAAAAAGCAGCTAAGTCAATAACGTTTAGGTCCCTGAATCTAC----------TGAGCTAAAAGTTCAATGAGAATTAATTCCCTATAAGTATTGTAGCAATTCTTGAGGTTATTTGTAAGGACTCACATGAGAGCTAAACA---AAAGAGGACTGAGAACATTTCAGGGCATGGAGAACACCCTCC----TTGTTCAGAT--------GAGACATTACCATTTATTTTGACTCCCTCTTTTTGAATAAAC i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21792110 647 - 63241923 tgtgtgtg--tgtgtgtTTCCTAGAAAAGGAAAT-GGAGTCTTTACCCTCAAAAAATGTATTATTTAGCTGGGGAGACAGGACTTCCGATTAGGGCATTTTTTAGTTTCAATTTTGATTATCTCACCTTTAGATATTTGAAAAGACCAAAATGCTGAATGCTTATGGATTACAATCAGTTATGACTGGAAAACCA---TAATAAATG-------------------AATAT------------TAGTTAATTATCACCTACTGAAGAAATGTTTAAAATGAGTATtaatataaattagtataaattaatagtattataatatagtatagtacaaatatcataaaattattataaATAGAAATAAAATTACTATAAattttattttattttattttatttcattttattttattATTTCTTCttattatttttttagtataaattttaaaaaGCAAACATGCCAATAAAGTTTAGGTCCCTGAATCTACTGATTAGATATGAGTAAAAAATTTAGTGAGAATTAATTCCTTATTGGTTACACAGAAATTTATG-----GTTTGGAAAGACTAA-ATAGAACCTAAACAATTTAGGAAGACTAAGAACTTTTCAAGGTATAGAGAATAACCTCC----TTGTTCAGACAGTGCTTTGAGATACAGCCACCCATTTC--TTCTCTCTTTTAGAACAAGC i canFam3.chr13 I 36 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e calJac3.chr3 45076037 0 - 190850796 I a score=9555.000000 s hg38.chr9_KI270719v1_random 158469 1 + 176845 T s panTro5.chr20 31536128 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr4 289610 1 - 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 74862 1 - 87586 T i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42646111 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 62113 1 + 80219 T i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144539984 1 - 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3654658 1 + 39453387 T i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1273681 1 + 25348628 T i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274830 1 + 48547382 T i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 48230 1 + 294823 T i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320942 1 + 12320365 T i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660899 1 + 15139346 T i saiBol1.JH378162 I 4 I 1 s aotNan1.NW_018493494v1 9857699 1 + 11631747 T i aotNan1.NW_018493494v1 C 0 I 86 s canFam3.chr13 21792757 1 - 63241923 T i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e cebCap1.NW_016107603v1 495604 44 + 3802414 I e calJac3.chr3 45076037 0 - 190850796 I a score=89178.000000 s hg38.chr9_KI270719v1_random 158470 17 + 176845 -TCCACTTAGGAACTTAA s panTro5.chr20 31536129 17 + 66533130 -TCCACTTAAGAACTTAA i panTro5.chr20 C 0 C 0 s panPan2.chr4 289611 17 - 195804263 -TCCACTTAAGAACTTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 74863 17 - 87586 -TCCACTTAGGAACTTAA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42646112 17 + 85365473 -TCCACTTAGGAACTTAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 62114 17 + 80219 -TCCACTTAGGAACTTTA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144539985 17 - 189454096 -TCCACTTAGGAATGTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3654659 17 + 39453387 -TCCACTTAGGAATGTAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1273682 17 + 25348628 -TCCACTTAGGAATGTAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274831 17 + 48547382 -TCCACTTAGGAATGTAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 48231 16 + 294823 -TCCACTTAGGAATGT-A i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320943 16 + 12320365 -TCCACTTA-GAACTTAA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660901 17 + 15139346 -CCTAAGTAGAAGTTTAT i saiBol1.JH378162 I 1 I 21 s canFam3.chr13 21792758 18 - 63241923 TCCCACTTGAGATCTTAA i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e aotNan1.NW_018493494v1 9857700 86 + 11631747 I e cebCap1.NW_016107603v1 495604 44 + 3802414 I e calJac3.chr3 45076037 0 - 190850796 I a score=57512.000000 s hg38.chr9_KI270719v1_random 158487 6 + 176845 AAACCA s panTro5.chr20 31536146 6 + 66533130 AAACCA i panTro5.chr20 C 0 C 0 s panPan2.chr4 289628 6 - 195804263 AAACCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 74880 6 - 87586 AAACCA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42646129 6 + 85365473 AAACCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 62131 6 + 80219 AAACCA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144540002 6 - 189454096 AAGCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3654676 6 + 39453387 AAACCA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1273699 6 + 25348628 AAACCA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274848 6 + 48547382 AAACCA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 48247 6 + 294823 AAACCA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320959 6 + 12320365 AAACCA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660939 6 + 15139346 AAACCA i saiBol1.JH378162 I 21 I 13 s cebCap1.NW_016107603v1 495648 6 + 3802414 AAACCA i cebCap1.NW_016107603v1 I 44 I 13 s canFam3.chr13 21792776 6 - 63241923 AAACCA i canFam3.chr13 C 0 I 187 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e aotNan1.NW_018493494v1 9857700 86 + 11631747 I e calJac3.chr3 45076037 0 - 190850796 I a score=25306.000000 s hg38.chr9_KI270719v1_random 158493 3 + 176845 CCT s panTro5.chr20 31536152 3 + 66533130 CCT i panTro5.chr20 C 0 C 0 s panPan2.chr4 289634 3 - 195804263 CCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 74886 3 - 87586 CCT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42646135 3 + 85365473 CCT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 62137 3 + 80219 CTT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144540008 3 - 189454096 CCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3654682 3 + 39453387 CCT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1273705 3 + 25348628 CCT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5274854 3 + 48547382 CCT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 48253 3 + 294823 CCT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4320965 3 + 12320365 TCT i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14660958 3 + 15139346 CCT i saiBol1.JH378162 I 13 C 0 s cebCap1.NW_016107603v1 495667 3 + 3802414 CCT i cebCap1.NW_016107603v1 I 13 C 0 s canFam3.chr13 21792969 3 - 63241923 tct i canFam3.chr13 I 187 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e aotNan1.NW_018493494v1 9857700 86 + 11631747 I e calJac3.chr3 45076037 0 - 190850796 I a score=154929.000000 s hg38.chr9_KI270719v1_random 158496 20 + 176845 ---------------------------------GTAAACCAACAGC-CATAAAA s panTro5.chr20 31536155 20 + 66533130 ---------------------------------GTAAACCAATAGC-CACAAAA i panTro5.chr20 C 0 I 1 s panPan2.chr4 289637 20 - 195804263 ---------------------------------GTAAACCAATAGC-CACAAAA i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01000881v1 74889 20 - 87586 ---------------------------------GTAAACCAACAGC-CACAAAA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42646138 20 + 85365473 ---------------------------------AAAAACCAATAGC-CACAAAA i nomLeu3.chr20 C 0 I 1 s rheMac8.chrUn_NW_014841389v1 62140 20 + 80219 ---------------------------------ATAAACCAATAGC-CACAAAA i rheMac8.chrUn_NW_014841389v1 C 0 I 1 s macFas5.chr5 144540011 20 - 189454096 ---------------------------------AAAAACCAATAGC-CACAAAA i macFas5.chr5 C 0 I 1 s macNem1.NW_012011022v1 3654685 20 + 39453387 ---------------------------------AAAAACCAATAGC-CACAAAA i macNem1.NW_012011022v1 C 0 I 1 s cerAty1.NW_012002843v1 1273708 20 + 25348628 ---------------------------------AAAAACCAATAGC-CACAAAA i cerAty1.NW_012002843v1 C 0 I 1 s chlSab2.chr27 5274857 20 + 48547382 ---------------------------------AAAAACCAATAGC-CACAAAA i chlSab2.chr27 C 0 I 1 s manLeu1.NW_012101853v1 48256 20 + 294823 ---------------------------------AAAAACCAATAGC-CACAAAA i manLeu1.NW_012101853v1 C 0 I 1 s colAng1.NW_012120821v1 4320968 20 + 12320365 ---------------------------------AAAAACCAATAGC-CACAAAA i colAng1.NW_012120821v1 C 0 I 1 s calJac3.chr3 145774700 21 + 190850796 ---------------------------------gtcaacccacagcaCTCAAAA i calJac3.chr3 I 4195 I 1 s saiBol1.JH378162 14660961 20 + 15139346 ---------------------------------AAAAACCAATAGC-CACAAAA i saiBol1.JH378162 C 0 I 1 s cebCap1.NW_016107603v1 495670 20 + 3802414 ---------------------------------AAAAACCAATAGC-CACAAAA i cebCap1.NW_016107603v1 C 0 I 1 s canFam3.chr13 21792972 53 - 63241923 ctaaataataaatcttAaaacacacacacaaacacacacacacaGC-CACAGAA i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e aotNan1.NW_018493494v1 9857700 86 + 11631747 I a score=3358681.000000 s hg38.chr9_KI270719v1_random 158516 370 + 176845 --AAGTGGGGAACTCAGTGTttaagcattattgtt--------c-accagacacagtactgggcacttacat-aaatggtatggtttaagcatgacaata--atgagatagaaattctactatcattccatttttacaggtg-aagaaatcaaggtctacaaaataaatcaaataa---tatgtttaaattcata--------------------AGGGCTTTGATTTTAGAAATTTTAGA-TTTTTTGTC----TTTAATACC-AAttatttttaaataatttt-----actcacaagaagtta-aaaaatagtaaaaagaatgaccgtcttattttcagccaactttccc---cagtaattatatctaacttaa-----cctagtactttgcc-aaatcaggaaattgacattgtttccataccatt s panTro5.chr20 31536176 376 + 66533130 --AAGTGAGGAACTCAGTGTttaagcattattgtt--------c-accagacacggtactgggcacttacat-aaatggtatggtttaagcatgacaata--atgagataggaattgtactattattccatttttacaggtg-aagaaatcaaggtctacaaaataaatcaaataa---tatgttcaCATTCAAA--------------------AGGGCTTTGATTTTAGAAATTTTAGATTTTTTTGTCTTTGTttaatacc-tattatttttaaataatttg-----actcacaagaagtta-aaaaatagtaaaaagaatgaccgtgttattttcagccaactttccc---caatgattatatctaacttaa-----cctagtacattgccaaaatcaggaaattgacattgtttccataccatt i panTro5.chr20 I 1 C 0 s panPan2.chr4 289658 376 - 195804263 --AAGTGAGGAACTCAGTGTttaagcattattgtt--------c-accagacacggtactgggcacttacat-aaatggtatggtttaagcatgacaata--atgagataggaattgtactattattccatttttacaggtg-aagaaatcaaggtctacaaaataaatcaaataa---tatgttcaCATTCAAA--------------------AGGGCTTTGATTTTAGAAATTTTAGATTTTTTTGTCTTTGTttaatacc-tattatttttaaataatttg-----actcacaagaagtta-aaaaatagtaaaaagaatgaccgtgttattttcagccaactttccc---caatgattatatctaacttaa-----cctagtacattgccaaaatcaggaaattgacattgtttccataccatt i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01000881v1 74909 375 - 87586 --AAGTGGGGAACTCAGTGTttaagcattattgtt--------c-accagacacggtactgggcacttacat-aaatggtatggtttaagcatgacaata--atgagatagaaattctactatcattccatttttacaggtg-aagaaatcaaggtctacaaaataaatcaaataa---tatgttcaaattcata--------------------AGGGCTTTGATTTTAGAAATTTTAGA-TTTTTTGTCTTTGTTTAATACC-AAttatttttaaataatttg-----actcacaagaagtta-aaaaatagtaaaaagaatgaccgtgttattttcagccaactttccc---caataattatatctaacttaa-----cctagtatgttgccaaaatcaggaaattgacattgtttccataccatt i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42646159 372 + 85365473 --AAGTGGGGAACTCAGCGTTTAAGCATTATTGTTCtgctatac-acagtacacagtactgggcacttacat-aaatggtatgatttaagcatgacaatc--atgagataggaatcatactattattccatttttacaggtg-aagaaatcaaggtctacaaaagaaatcaaataa---tatgtccaaattcata--------------------tggGCTTTGATTTTGGAAGTTTTAGA--TTTTTGTCTTTGTttaatacc-ttttattttaaaagaatttg-----actcataagaagttacaaaaatagtaaaaagaatgactgtgttattttcagccaactttccc---caatgattatatctaagttta-----cctagtacattgccaaaat-----------cgttgtttccataccatt i nomLeu3.chr20 I 1 C 0 s rheMac8.chrUn_NW_014841389v1 62161 376 + 80219 --AAGTGAGGAACTCAGTGTCTAAGCACTATTGTT--------Ctgccagacacagtactgggcacatatat-aaatgctatgatttaagcatgacatta--atgagataggaattgtactattattccagttttacaggtgaaagaaatcgaggtctacaaaataaatcaaataa---tatgttcaaattcata--------------------AGGGCTTTGATTTTAGAACTTTGAGA--TTT-----TTTGTTTAATacc-tattatttttcaataattcgtctcaactcagaagaagtta-aaaaatactaaaaagaatgaccgtgttattttcagtcagcttttcc---caatgattatatctaacgtaa-----cctagtacgttgccaaaatcaggaaattgacattgtttctataccatt i rheMac8.chrUn_NW_014841389v1 I 1 C 0 s macFas5.chr5 144540032 371 - 189454096 --AAGTAGGAAACTCAGTATttaagcattatcgtt--------ctgctctacacagtactgggcacttacat-agatggtatgatttaagcatgacaata--atgagataggaatcatactattattccatttttacagatg-aagaaatcaaggtctacaaaagaaatataaaaa---tatattcaaattcata--------------------GGGGCTTTGATTTGGGAACTTTTAGA--TTTTTGTCTTTGTTTAATAAC------ttttaaaagaatttg-----actcataagaagttacaaaaatagtaaaaagaaggacaatgtttttttcagccaactttccc---caatgattatacataatttta-----cctagtacgttgccaaaatcaggttactgacattgtttccataccatt i macFas5.chr5 I 1 C 0 s macNem1.NW_012011022v1 3654706 371 + 39453387 --AAGTAGGAAACTCAGTATttaagcattattgtt--------ctgctctacacagtactgggcacttacat-agatggtatgatttaagcatgacaata--atgagataggaatcatactattattccatttttacagatg-aagaaatcaaggtctacaaaagaaatataaaaa---tatattcaaattcata--------------------GGGGCTTTGATTTGGGAACTTTTAGA--TTTTTGTCTTTGTTTAATAAC------ttttaaaagaatttg-----actcataagaagttacaaaaatagtaaaaagaaggacaatgtttttttcagccaactttccc---cagtgattatacataatttta-----cctagtacattgccaaaatcaggttactgacattgtttccataccatt i macNem1.NW_012011022v1 I 1 C 0 s cerAty1.NW_012002843v1 1273729 371 + 25348628 --AAGTAGGAAACTCAGTATttaagcattattgtt--------ctggtctacacagtactgggcacttacat-agatggtatgatttaagcatgacaata--atgagataggaatcatactattattccatttttacagatg-aagaaatcaaggtctacaaaagaaatataaaaa---tatattcaaattcata--------------------GGGGCTTTGATTTGGGAACTTTTAGA--TTTTTGTCTTTGTTTAATAAC------ttttaaaagaatttg-----acgcataagaagttacaaaaatagtaaaaagaatgactgtgttattttcagccaactttccc---caatgattatacataatttta-----cctagtacattgccaaaatcaggttactgacattgtttccataccatt i cerAty1.NW_012002843v1 I 1 C 0 s chlSab2.chr27 5274878 376 + 48547382 --AAGTAGGAAACTCAGTATttaagcattattgtt--------ctcctctacacagtactgggcacttacat-agatggtatgatttaagcatgacaata--atgagataggaatcatactattattccatttttacagatg-aagaaatcaaggtctacaaaagataTATAAAAA---TATATTCAAATTCATA--------------------GGGGCTTTGATTTGGGAACTTTTAGA--TTTTTGTCTTTGTTTAATAAC-ttttattttaaaataatttg-----actcgtaagaagttacaaaaatagtaaaaagaaggacaatgtttttctcagccaactttccc---caatgattatacataatttta-----cctagtacattgccaaaatcaggttactgacattgtttccataccatt i chlSab2.chr27 I 1 C 0 s manLeu1.NW_012101853v1 48277 371 + 294823 --AAGTAGGAAACTCAGTATttaagcattattgtt--------ctggtctacacagtactgggcacttacat-agatggtatgatttaagcatgacaata--atgagataggaatcatactattattccatttttacagatg-aagaaatcaaggtctacaaaagaaatataaaaa---tatattcaaattcata--------------------GGGGCTTTGATTTGGGAACTTTTAGA--TTTTTGTCTTTGTTTAATAAC------ttttaaaagaatttg-----actcataagaagttacaaaaatagtaaaaagaaggacaatgtttttttcagccaactttccc---caatgattatacataatttta-----cctagtacattgccaaaatcaggttactgacattgtttccataccatt i manLeu1.NW_012101853v1 I 1 C 0 s colAng1.NW_012120821v1 4320989 376 + 12320365 --AAGTAGGAAACTCAGTATttaagcattattttt--------ctgctctacacagtactgggcacttacat-agatggtctggtttaagcatgacaata--atgagataggaatcacactattattccatttttacaggtg-aagaaatcaaggtctacaaaagaaatataaaaa---tatattcaaattcata--------------------GGGGCTTTGATTTGGGAACTTTTAGA--TTTTTGTCTTCATTTAATAAC-ttttattttaaaagaatttg-----actcataagaagttacaaaaatagtaaaaagaaggaccatgtttttttcagccaactttcca---caatgattatatgtaatttta-----cctagtacactgtcaaaatcaggatactgacattatttccataccatt i colAng1.NW_012120821v1 I 1 C 0 s calJac3.chr3 145774722 387 + 190850796 --AAGTGGAGAACTCAGTGTttaagcattattgtt--------ctgctatacacagtactgagcgtgtacataaaatgatatgatttaagcatgacaata--atgagatagaaatcacactattatt-catttttagaggtg-aagaaatcaaggtctacaaaagaaatcaaataa---tatgtccaaattcataccactgataacaaggaaaacaaggctttgaTTTTAGAACTTTTCGA--TTTTTGTCTTTGTTTAATACT------TTAAAaaataatttt-----actcacaagaagttacaaaaataataaaaagaatgaccatgttattttcagccaactttccc---cagtaat----tctaacttaa-----actagtatattgacaaaatcaggcaattgacgtagtttccataccatt i calJac3.chr3 I 1 C 0 s saiBol1.JH378162 14660982 377 + 15139346 --AAGTGGGGAACTCAGTGCttaagcattattgtt--------ctgctatacacagtactgagcacgtacat-aaatggtatgatttaagcatgacaata--atgagataggactcacacta-tatt-catttttacaggtg-aagaaatcaaggtctacaaaagaaatcaaataa---tatctccaaattcataccactgataacaagaaaagcaagtctttgaTTTTAGAACTTTTACA--TTTTTGTCTTTGTTTAATACT------tttaaaaataatttt-----actaataagaagttacaaaaatagtaaaaagaatgactgtgttattttcagccaactttccc---cagtgattatatctgacttaa-----cct------------aaatcaggcaattgacattgtttacataccatt i saiBol1.JH378162 I 1 C 0 s cebCap1.NW_016107603v1 495691 390 + 3802414 --AAATGGAGAACTCAGTGTttaagcattattgtt--------ctgctatacacagtactgagcacgtacat-aaatggtatgatttaagcatgacaata--atgagataggaatcatactattatt-catttttacaagtg-aagaaatcaagatctacaaaagaaatcaaataa---tatgtccaaattcataccactgataacaaggaaaacaaggctttgaTTTTAGAACTTTTATA--TTTTTGTCTTTGTTTAAtatt------tttaaaaataatttt-----actcataagaagtcacaaaactagtaaaaagaatgaccgtgttattttcagccaacttttcc---cagtgattatatctaacttaa-----cctagtatattgccaaaatcaggcaattgacattgtttccataccatt i cebCap1.NW_016107603v1 I 1 I 234 s aotNan1.NW_018493494v1 9857786 386 + 11631747 --AAGTGGGGAACTCAGTGTttaagcattattgtt--------ctgctatacacagtactgagcaagtacat-aaatggtatgattgaagcatgacaata--atcagataagaatcacacgattatt-cgtttttacaggtg-aagaaatcaaggtctacaaaagaaatcaaataa---tatgtccaaattcataccactgataacaagaaaaacaaggctttgattttagaacttttaga--ttTTTGTC----TTTAATACT------tttaaaaataatttt-----actcataagaagttacaaaaatagtaaaaagaatgcccgtgttattttcagccaactttccc---cagtgattatatctaacttaa-----cctagtatattgccaaaatccggcaattgacattgtttccataccatt i aotNan1.NW_018493494v1 I 86 C 0 s canFam3.chr13 21793025 409 - 63241923 AGAACTAGGGGACTCAATGTTTAAATTTCAgcttt--------atgctctacacaatattgggcacttacat-atactatctgatt-agtcatagcaatactatagagtacaaatcatgctattaactcaatttta-aggtg-aggaaactgaggcctagataagatgttgaataatactacactcaaattcatacagctaataatgaagaaagcaacaatttgatttcagaacttttcaa--ttTTTTTCTCT-TCCAACGCTAttttattttaaaataatttg-----actcataagcagttgtaaaaatcgtaaagagaattaatgtggtatctacaaccagcctcccctcacaataatcatatcttacttacatattcataacagattgcccaaaccaggaaatggacattggtacgatactatt i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I a score=2569726.000000 s hg38.chr9_KI270719v1_random 158886 311 + 176845 aactccagttcagaccctattcatatttccaaggattttacatgtactctt------------gtgtaggtgtgtgtgagtgtatgtgtgatgtgtgtgtataggtctatgaagtgtggatttatgtaaccatcaccataatctggatgcagaactgctctatcaccacaaagaaagt---acatgttttcacgttatccctcactaatcacatcttccaaccaaccctaacctttggcagccactgatctgttctccag-----------cactaggattatgCTTTGTAAATCAGG--TATTTTTGAAGCCAAAGCTCATGAGGTTGCTAAAT-AAAT s panTro5.chr20 31536552 311 + 66533130 aactcaggttcagaccttattcatatttctaaggattttacatgtactctt------------gtgtaggtgtgtgtgactgtatgtgtgatgtgtgtgtatagatctatgaagtgtggatttatgtaaccatcaccataatctggatgcagaactgctctatcaccacaaagaaagt---gcatgttttcacattgtccctcactaatcacatcttccaaccaaccctaacctttggcagccactgatctgttctccag-----------cactaGGACTATGCTATGTAAATCAGG--TATTTTTGAAGCCAAAGCTCATGAGGTTGCTAAAT-AAAT i panTro5.chr20 C 0 C 0 s panPan2.chr4 290034 311 - 195804263 aactcaggttcagaccttatacatatttctaaggattttacatgtactctt------------gtgtaggtgtgtgtgactgtatgtgtgatgtgtgtgtatagatctatgaagtgtggatttatgtaaccatcaccataatctggatgcagaactgctctatcaccacaaaaaaagt---gcatgttttcacattatccctcactaatcacatcttccaaccaaccctaacctttggcagccactgatctgttctccag-----------cactaGGACTATGCTATGTAAATCAGG--TATTTTTGAAGCCAAAGCTCATGAGGTTGCTAAAT-AAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75284 311 - 87586 aactcaggttcagaccctattcatatttctaaggattttacatgtactctt------------gtgtaggtgtgtgtgagtgtatgtgtgatgtgtgtgtatagatctatgaagtgcggatttatgtaaccatcaccataatctggatgcagaactgctctatcaccacaaagaaagt---acatgttttcatgttatccctcactaatcacatcttccaaccaacactaacctttggcagccactgatctgttctccag-----------cactaggattatgCTTTGTAAATCAGG--TATTTTTGAAGCCAAAGCTCATGAGGTTGCTAAAT-AAAT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42646531 314 + 85365473 aactcaggttcagaccctattcatacttctaaggattttacatgtactctt------------gtataggtatatgtgagtgtatgtgtgatgtgtgtgtatagttctatgaagtgtgggtttatgtaaccatcaccacaatctagatgcagaactgctttatcaacacaaagaaagtacaacatgttttcacattatctgtcactaatcacatcttccaaccaaccctaacccttggcagccactgatctcttctccat-----------cactacaattatgCTACATAATTCAGG--CATTTTTGAAACCAAAGCTCATGAGGTTGCCAAAT-AAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 62537 308 + 80219 aactcagattcagaccctattcatattttgaaggattttacatgtactctt------------gtgtaggtgtgtgtgagtgcatgtgtga--tgtgtgtatagatctatgaagtgtggatttatgtaaccattaccataatctggatgcagaacagctctatcaccacaaagaaagtgcaccatgttttcaggttatcccgcactaatcacatcttccaaccaaccctaacccttggcagccactgatctgttctccat-----------cactaggattatgctatGTAATTCAGG--TATTTTTGAAGCCAAAGCTCATGAGGTTGCAAAAT----- i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144540403 314 - 189454096 aactcaggtccagaccctattcatatttctaaggattttacatgtactctt------------gtgtaggtgtgtgtgagtgtatgtgtgatgtgtgtgtatagttctatgaagtgtggatttatgtaaccatcaccataatctagctgcagaactgctctatcaccacaaagaaagtacaacatgttttcactttatccctcactaatcacatcttccaaccagctctaaccctgggcagccactgatctgttctccat-----------cactacaattatgctatGTAATCCAGG--CATTTTTGAAACCAAAGCTCAGGAGGTTGCTAAAT-AAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3655077 314 + 39453387 aactcaggtccggaccctattcatatttctaaggattttacatgtactctt------------gtgtaggtgtgtgtgagtgtatgtgtgatgtgtgtgtatagttctatgaagtgtggatttatgtaaccatcaccataatctagctgcagaactgctctatcaccacaaagaaagcacaacatgttttcactttatccctcactaatcacatcttccaaccagctctaaccctgggcagccactgatctgttctccat-----------cactacaattatgctatGTAATCCAGG--CATTTTTGAAACCAAAGCTCAGGAGGTTGCTAAAT-AAAC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1274100 314 + 25348628 aactcaggtccggaccctattcatatttctaaggattttacatgtactctt------------gtgtaggtgtgtgtgagtgtatgtgtgatgtgtgtgtatagttctatgaagtgtggatttatgtaaccatcaccataatctagctgcagaactgctgtatcaccacaaagaaagtacaacatgttttcactttatccctcactaatcacatcttccaaccagctctaacccttggcagccactgatctgttctccat-----------cactgcaattatgctatGTAATCCAGG--CATTTTTGAAACCAAAGCTCACGAGGTTGCTAAAT-AAAT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5275254 325 + 48547382 aactcaggtccgtaccctattcatatttctaaggacttaacatgtactctt------------gtgtaggtgtgtgtgagtgtatgtgtgatgtgtgtgtatggttctttgaagtgtggatttatgtaaccttcaccataatctagctatagaactgctctatcaccacgaagaaagtacaacatgttttcactttatccctcactaatcacatcttccaaccagctctaacccttggcagccactgatttgttctccatcactacaattacactacaattatgctatgtaaTCGAGG--CATTTTTGAAACCAAAGCTCATGAGGTTGCTAAAT-AAAT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 48648 314 + 294823 aactcaggtccggaccctattcatatttctaaggattttacatgtactctt------------gtgtaggtgtgtgtgagtgtatgtgtgatgtgtgtgtatagttctatgaagtgtcaatttatgtaaccatcaccataatgtagctgcggaactgctctatcaccacaaagaaagtacaacatgttttcactttatccctcactaatcacatcttccaaccaactctaacccttggtagccactgatctgttctccat-----------cactacagttatgctatGTAATCCAGG--CATTTTTGAAACCAAAGCTCACGAGGTTGCTAAAT-AAAT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4321365 314 + 12320365 aactcaggtccggatcctattcatatttctaaggattttacatgtattctt------------gtgtaggtgtgtgtgagtgtatgtgtgatgtgtgtgtatagttctatgaagtgtggatttatgtaaccatcaccataatctagctgcagaactgctttttcaccacgaagaaagtacaacatgttttcactttatccctcactaatcacatcttccaaccagctctaacccttggcagccactgatctgttctccat-----------cactacaattatgctatATAATCCAGG--CATTTTTGAAACCAAAGCTCATGAGGTTGCTAAAT-AAAT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775109 293 + 190850796 ---------------------aatatttctaaggattttacatgtacactt------------gtgcaggtatatgtgagtgtacgtgtgatgtgtgtatatagttctatggagtgtggatttatgtaaccatcaccttgatctgcatgcatatctgctctatcaccacaaaaaatgtacaacatatttttacattatcccttactaaccacattttccaaccaaccctgacccttggcagccactgatcta-tctccat-----------cactaggattatgCTTTGTAATTCAGG--CATTTTTGGAACTAAAGCTCATGAGTTTGCtaaataaaaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661359 293 + 15139346 ---------------------aatatttctaagaattttacaagtatgctt------------gtgtaggtgtatgtgagtgtatgagtgatgtgtgtatatagttctatggagtgtggatttatgtaaccatcaccttaatctggaagcatatctgctctatcaccacaaaaaaagtacaacatgtttttacattaacccttactaatcacattttccaaacaaccctgacccttggcagccactgatctagtctccat-----------cactaggattatgctatGTAATTCAGA--CATTTTTGAAACCAAAGCTCATGAGGTTGCtaaat-aaaa i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9858172 305 + 11631747 ---------------------aatatatctaaggattttacatgtatgcttgtacatgtaaaggtgtaggtgtatgtgagtgtatgtgtgatgtgtgtatatagttctatggagtgtggatttatgtaaccatcaccttaatctggatgcatatctgctctatcaccacaaaaaaagtacaacatgctttcacattagcccttactaatcacattttccaaccaaccctgacccttggcagccactgatctattctccat-----------cactaggattACGCTATGTAATTCAGG--CATTTTTGAAACCAAAGCTCAAGAGTTTGCTAAAT-AAAA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21793434 248 - 63241923 aactcaggttcagattctaatcagatttcaaaggtttttacgtac------------------gtttacgtgtgcatg-------gcatactgtg-------gttccaatgaagcaaagattcatgtaaccatcactgcaatcaggatat-gaacttctctatcaccacaaAAAA---GCACCATATT---------------------------------------CTAGTCCTAGGCAACCACCTATCTGCTCTGCAT-----------CACTAGAATTCTTATCTCTAATTTAAGACCTTTTTTGAACCTAAAGTCCAGGAGACT-TTGAAT----- i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e cebCap1.NW_016107603v1 496081 234 + 3802414 I a score=1083426.000000 s hg38.chr9_KI270719v1_random 159197 120 + 176845 AATAATGTTTTATAAAATGTTATTTTCAGTCTTTATAAATGGCATACTGTAGCACATATTTAAATGTGC-TATACATGTATAGGTGG--CAAAGTTTGAACACGGATCTAAGTGCACAAATGT s panTro5.chr20 31536863 120 + 66533130 AATAATGTTTTATAAAATGTTATTTTCAGTCTTTATAAATGGCATACTGTAGCACATATTCAAATGTGC-TATACATGTATAGGTGG--CAAAGTCTGAACATGGATCTAAGTGCACAAACGT i panTro5.chr20 C 0 C 0 s panPan2.chr4 290345 120 - 195804263 AATAATGTTTTATAAAATGTTATTTTCAGTCTTTATAAATGGCATACTGTAGCACATATTCAAATGTGC-TATACATGTATAGGTGG--CAAAGTCTGAACATGGATCTAAGTGCACAAACGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75595 117 - 87586 AATA---TTTTATAAAATGTTATTTTCAGTCTTTATAAATGGCATACTGTAGCACATATTCAAATGTGC-TATACATGTATAGGTGG--CAAAGTTTGAACATGGATCTAAGTGCACAAACGT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42646845 121 + 85365473 AATAATGTTTTATACAATATTATTTTCAGTCTTTATAAATGGCATACTGTAGCACATATTCAAATGTGT-TATGCATATATAGGTGAGCTACAGCTTGAACATGGATCTAAGTGCACAAAC-T i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 62845 120 + 80219 AATAATGTTTTATAAAATATTATTTTCAGTCTTTATAAATGGCAAACTGTAGCACATATTCAAATGTGC-TATACATGTGTAGGTGG--CAAAGTTTGAACATGGATCTAAGTGCCTGAATGT i rheMac8.chrUn_NW_014841389v1 C 0 I 298 s macFas5.chr5 144540717 122 - 189454096 AATACTATTTTATACAATATTATTTTCAGTCTTTATATACGGCATACTGTAGCACATACTCAAAGGTGC-TATGCATGTAAAGGTGAGTTACAGCTTGAACATGAATCTAAGTGCACAAACAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3655391 122 + 39453387 AATACTATTTTATACAATATTATTTTCAGTCTTTATAAACGGCATACTGTAGCACATACTCAAAGGTGC-TATGCATGTAAAGGTGAGTTACAGCTTGAACATGAATCTAAGTGCACAAACAT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1274414 122 + 25348628 AATACTATTTTATACAATATTATTTTCAGTCTTTATAAATGGCATACTGTAACACATACTCAAAGGTGC-TATGCATGTAAAGGTGAGTTACAGCTTGAACATGAATCTAAGTGCACAAACAT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5275579 122 + 48547382 AATACTATTTTATACAATATTATTTTCAGTCTTTATAAATGGCATACTGTAGCACACACTCAAAGGTGC-TATGCATGTAAAGGTGAGTTACAGCTTGAACATGAATCTAAGTGCACAAACAT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 48962 122 + 294823 AATACTATTTTATACAATATTATTTTCAGTCTTTATAAACGGCATACTGTAGCACATACTCAAAGGTGC-TATGCATGTAAAGGTGAGTTACAGCTTGAACGTGAATCTAAGTGCACAAACAT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4321679 122 + 12320365 AATAGTATTTTAAACAATATTATTTTCAGTCTTTATAAATGGCATACTGTAGCACATACTCAAAGGTGC-TATGCATGTATAGGTGAGATACAGCTTGAACATGGATCTAAGTGCACAAACGT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775402 122 + 190850796 aatcattttttataaaataatattttCAATCTGTATAAATGGTATACGGCACAACATATTCAAATGCAT-TATGCGTGTATAGGTGAGCTAAAGCTTGAACATGGATCTAAGTTCACAAATGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661652 122 + 15139346 aataattttttataaaataatattttCTATCTGTATAAATGGTATACGGTACAAGATATTCAAATGCAC-TATGTGTGTATAGGTGAGCTAAAGCTTGAACATGGATCTAAGTTCACAAATGT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496315 122 + 3802414 AATAATTTTTTATAAAATAATATTTTCAATCTGTATAAATGGTATATGGTATAAGATATTCAAATGCAC-TATGCGTGTATAGGTGAGCTAAAGCTTGAACATGGATCTAAGTTCACAAATGT i cebCap1.NW_016107603v1 I 234 C 0 s aotNan1.NW_018493494v1 9858477 119 + 11631747 AATAATTTTTTAT---ATAATATTTTCAATCTGTATAAATGGTATATGGTACAACATATTCAAATGCAC-TATGCGTGTATAGGTAAGCTAAAGCTTGAACATGGATCTAAGTTCACAAATGT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21793682 123 - 63241923 GCCAATTTTTTTTTAGGCATTCTTTGCATTCTCCACAAATGGTATGCCATGGTGCATTTTCAAATGTGCATATACATGTATAAGTGAGCTAAGGATTGAACATGGATTTAAATACACAAAAGT i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I a score=501742.000000 s hg38.chr9_KI270719v1_random 159317 52 + 176845 AAAAAATATTGTACACTTTTATCACAATATCCCTATTTGTAATATTTTCCCC s panTro5.chr20 31536983 52 + 66533130 AAAAAATATTGTACGCTTTTATCACAATATCCCTATTTGTAATATTTTCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr4 290465 52 - 195804263 AAAAAATATTGTACGCTTTTATCACAATATCCCTATTTGTAATATTTTCCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75712 52 - 87586 AAAAAATATTGTACACTTTTATCACAATATCCCTATTTGTAATATTTTCCCC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42646966 52 + 85365473 AAAAAACATTTTATGCTTTTATCGCAATATCCCTATTTGTAATCTTTTTCCC i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63263 52 + 80219 aaaaaaTATTGTACACTTTTATCACAACATCCTCATTTGTAATCTTTTCCCC i rheMac8.chrUn_NW_014841389v1 I 298 C 0 s macFas5.chr5 144540839 52 - 189454096 AAAAAATATTTTATGCTTTTATCACAATATCCCTATTTGTAATCTTTTTCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3655513 52 + 39453387 AAAAAATATTTTATGCTTTTATCACAATATCCCTATTTGTAATCTTTTTCCC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1274536 52 + 25348628 AAAAAATATTTTATGCTTTTATCACAATATCCCTATTTGTAATCTTTTTCCC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5275701 52 + 48547382 AAAAAATATTTTATGCTTTTATCACAATATCCCTATTTGTAATCTTTTTCCC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 49084 52 + 294823 AAAAAATATTTTATGCTTTTATCACAATATCCCTATTTGTAATCTTTTTCCC i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4321801 51 + 12320365 -AAAAATATTTTACGCTTTTATCACAATATCCCTATTTGTAATCTTTTTCCC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775524 50 + 190850796 AAAAAATA-TTTATACTTTTATCACAATATTCCTATTTGTAAT-TTTTTCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661774 50 + 15139346 AAAAAATATTTTACACTTCTATCACAATATTCCTATTTGTAA--TTTTTCCC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496437 51 + 3802414 AAAACATATTGTACACTTTTATCACAATATTCCTATTTGTAAT-TTTCTCAC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858596 50 + 11631747 AAAAAATATTGTACACTTTTATCACAATATTCCTATTTGTAA--TTTTTCCC i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21793805 50 - 63241923 AAAGACTATTATATACTATCATCACTATAACCCTATTTATAATTCTCTTC-- i canFam3.chr13 C 0 C 0 e eulMac1.LGHX01003138v1 122472 1456 + 330844 I e tarSyr2.KE948818v1 242697 90 - 1045278 I a score=142136.000000 s hg38.chr9_KI270719v1_random 159369 14 + 176845 CAAAAACTAGTAGT s panTro5.chr20 31537035 14 + 66533130 CAAAAGCTAGTAGT i panTro5.chr20 C 0 C 0 s panPan2.chr4 290517 14 - 195804263 CAAAAGCTAGTAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75764 14 - 87586 CAAAAGCTAGTAGT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647018 14 + 85365473 AAAAAACTAGTAGT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63315 14 + 80219 CAAAAGCTAGTAGT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144540891 14 - 189454096 TAAAAACTAGTATT i macFas5.chr5 C 0 I 1 s macNem1.NW_012011022v1 3655565 14 + 39453387 TAAAAACTAGTATT i macNem1.NW_012011022v1 C 0 I 21 s cerAty1.NW_012002843v1 1274588 14 + 25348628 TAAAAACTAGTATT i cerAty1.NW_012002843v1 C 0 I 21 s chlSab2.chr27 5275753 14 + 48547382 TAAAAACTAGTATT i chlSab2.chr27 C 0 I 48 s manLeu1.NW_012101853v1 49136 14 + 294823 TAAAAACTAGTATT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4321852 14 + 12320365 TAAAAACTAGTAGC i colAng1.NW_012120821v1 C 0 I 13 s calJac3.chr3 145775574 14 + 190850796 CAAAAGCTAGTAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661824 14 + 15139346 CAAAAGCTAGTAGT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496488 14 + 3802414 CAAATGCTAATAGT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858646 14 + 11631747 CAAAAGCTAGTAGT i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 123928 14 + 330844 CAAAAACTAGTAGT i eulMac1.LGHX01003138v1 I 1456 C 0 s canFam3.chr13 21793855 14 - 63241923 Caaaaaaaaataaa i canFam3.chr13 C 0 C 0 e tarSyr2.KE948818v1 242697 90 - 1045278 I a score=28677.000000 s hg38.chr9_KI270719v1_random 159383 7 + 176845 AGTGATA s panTro5.chr20 31537049 7 + 66533130 AGTGATG i panTro5.chr20 C 0 C 0 s panPan2.chr4 290531 7 - 195804263 AGTGATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75778 7 - 87586 AGTGATG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647032 7 + 85365473 AGTGATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63329 7 + 80219 AGCGATG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144540906 2 - 189454096 -----AG i macFas5.chr5 I 1 C 0 s manLeu1.NW_012101853v1 49150 3 + 294823 ----TGG i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4321879 7 + 12320365 AGTGATG i colAng1.NW_012120821v1 I 13 C 0 s calJac3.chr3 145775588 7 + 190850796 AGTGATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661838 7 + 15139346 AGTGATG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496502 7 + 3802414 AGTGATG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858660 7 + 11631747 AGTGATG i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 123942 7 + 330844 GGTAACT i eulMac1.LGHX01003138v1 C 0 C 0 s canFam3.chr13 21793869 7 - 63241923 aataaaa i canFam3.chr13 C 0 I 41 e tarSyr2.KE948818v1 242697 90 - 1045278 I e chlSab2.chr27 5275767 48 + 48547382 I e cerAty1.NW_012002843v1 1274602 21 + 25348628 I e macNem1.NW_012011022v1 3655579 21 + 39453387 I a score=26683.000000 s hg38.chr9_KI270719v1_random 159390 4 + 176845 TTTG s panTro5.chr20 31537056 4 + 66533130 TTTG i panTro5.chr20 C 0 C 0 s panPan2.chr4 290538 4 - 195804263 TTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75785 4 - 87586 TTTG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647039 4 + 85365473 TTTG i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63336 4 + 80219 TTTG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144540908 4 - 189454096 TTTC i macFas5.chr5 C 0 C 0 s manLeu1.NW_012101853v1 49153 4 + 294823 TTTC i manLeu1.NW_012101853v1 C 0 C 0 s nasLar1.chr5 135775178 1 - 174288623 ---A i nasLar1.chr5 N 0 I 7055 s colAng1.NW_012120821v1 4321886 4 + 12320365 TTTG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775595 4 + 190850796 TTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661845 4 + 15139346 TTTG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496509 4 + 3802414 TTTG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858667 4 + 11631747 TTTG i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 123949 4 + 330844 TTTG i eulMac1.LGHX01003138v1 C 0 C 0 e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 21793876 41 - 63241923 I e chlSab2.chr27 5275767 48 + 48547382 I e cerAty1.NW_012002843v1 1274602 21 + 25348628 I e macNem1.NW_012011022v1 3655579 21 + 39453387 I a score=9100.000000 s hg38.chr9_KI270719v1_random 159394 1 + 176845 C s panTro5.chr20 31537060 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr4 290542 1 - 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75789 1 - 87586 C i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647043 1 + 85365473 C i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63340 1 + 80219 C i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144540912 1 - 189454096 C i macFas5.chr5 C 0 I 13 s manLeu1.NW_012101853v1 49157 1 + 294823 C i manLeu1.NW_012101853v1 C 0 I 13 s colAng1.NW_012120821v1 4321890 1 + 12320365 C i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775599 1 + 190850796 C i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661849 1 + 15139346 C i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496513 1 + 3802414 C i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858671 1 + 11631747 C i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 123953 1 + 330844 C i eulMac1.LGHX01003138v1 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 21793876 41 - 63241923 I e chlSab2.chr27 5275767 48 + 48547382 I e cerAty1.NW_012002843v1 1274602 21 + 25348628 I e macNem1.NW_012011022v1 3655579 21 + 39453387 I a score=41550.000000 s hg38.chr9_KI270719v1_random 159395 4 + 176845 TTTC s panTro5.chr20 31537061 4 + 66533130 TTTC i panTro5.chr20 C 0 C 0 s panPan2.chr4 290543 4 - 195804263 TTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75790 4 - 87586 TTTC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647044 4 + 85365473 TTTC i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63341 4 + 80219 TTTC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144540926 4 - 189454096 TTTC i macFas5.chr5 I 13 C 0 s macNem1.NW_012011022v1 3655600 4 + 39453387 TTTC i macNem1.NW_012011022v1 I 21 C 0 s cerAty1.NW_012002843v1 1274623 4 + 25348628 TTTC i cerAty1.NW_012002843v1 I 21 C 0 s manLeu1.NW_012101853v1 49171 4 + 294823 TTTC i manLeu1.NW_012101853v1 I 13 C 0 s colAng1.NW_012120821v1 4321891 4 + 12320365 TTTC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775600 4 + 190850796 TTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661850 4 + 15139346 TTTC i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496514 4 + 3802414 TATC i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858672 4 + 11631747 TTTC i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 123954 4 + 330844 TTTC i eulMac1.LGHX01003138v1 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 21793876 41 - 63241923 I e chlSab2.chr27 5275767 48 + 48547382 I a score=754155.000000 s hg38.chr9_KI270719v1_random 159399 72 + 176845 TCTTATTTAAA----TTATCCGAATTATAGTCATTACTAATTGAAAGTATGTTTT--aatactgcctgattccactta s panTro5.chr20 31537065 72 + 66533130 TCTCATTTAAA----CTATCAGAATTATAGTCGttactaattgaaagtatgtctg--aatactgcctgattccactta i panTro5.chr20 C 0 C 0 s panPan2.chr4 290547 72 - 195804263 TCTCATTTAAA----CTATCAGAATTATAGTCGttactaattgaaagtatgtctg--aatactgcctgattccactta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75794 72 - 87586 TCTTATTTAAA----TTATCTGAATTATAGTCATTACTAATTGAAAGTATGTTTT--aatactgcctgattccactta i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647048 74 + 85365473 TCTTATTTAAA----CTATGAGAATTATAGCCATTACTAATTGAAAGTACGTTTGCCaatactgcctgattccactta i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63345 72 + 80219 TCTTATTTAAA----CTATCAGAATTATAGTCATTACTAATTGAAAGTATGTTTG--aataatgcctgattccactta i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144540930 72 - 189454096 TCTTATTTAAC----CTATGAGAATTATAGTCATTACTAATTGTAAGTATGTTTG--AGtactgcctgattccactta i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3655604 72 + 39453387 TCTTATTTAAC----CTATGAGAATTATAGTCATTACTAATTGTAAGTATGTTTG--AGtactgcctgattccactta i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1274627 72 + 25348628 TCTTATTTAAC----CTATGAGAATTATAGTCATTACTAATTGTAAGTATGTTTG--AGtactgcctgattccactta i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5275815 72 + 48547382 TCTTATTTAAC----CTATGAGAATTATAGTCATTACTAATTGTAAGTATGTTTG--AGtactacctgattccactta i chlSab2.chr27 I 48 C 0 s manLeu1.NW_012101853v1 49175 72 + 294823 TCTTATTTAAC----CTATGAGTATTATAGTCATTACTAATTGTAAGTATGTTTG--AGtactgcctgattccactta i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4321895 72 + 12320365 TCTTATTTAAC----CTGTGAGAATTATAGTCATTACTAATTGCAAGTATGTTTG--aatactgcctgattccactta i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775604 68 + 190850796 TC----TTAAA----CTGTCAGAATTATAGTCACTACTAATCGTGAGTATGTTTG--aatactgcctgatttcactta i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661854 72 + 15139346 TCTTATTTAAA----CTATCAGAATTATAGTCATTACTAATTGTAAGTATGTTTG--aatactgcctgattccactta i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496518 72 + 3802414 TCTTATTTAAA----TTATCAGAATTATAGTCATTACTAATTGTAAGTATGTTTG--aatactgcctgattccactta i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858676 72 + 11631747 TCTTATTTAAA----CTATCAGAATTATAGTCATTACTAATTGTAAGTATGTTTG--aatactgcctgattccactta i aotNan1.NW_018493494v1 C 0 C 0 s eulMac1.LGHX01003138v1 123958 76 + 330844 TTTTATTTAAACTATCTATCAGAATTATTGTCATTACTAAATAAAAGTATATTTa--aatgttgcttgtttccactta i eulMac1.LGHX01003138v1 C 0 N 0 e nasLar1.chr5 135775179 7055 - 174288623 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 21793876 41 - 63241923 I a score=669742.000000 s hg38.chr9_KI270719v1_random 159471 81 + 176845 cgtaagatatctacaatagttaaactcccagaaatagagtagaatactggttgccagggtctggaaggaggggaaatggag s panTro5.chr20 31537137 81 + 66533130 cgtaagatatccaaaatagataaactcttagaaacagagaagaatactggttgccagggtctggaagcaggggaaatgggg i panTro5.chr20 C 0 C 0 s panPan2.chr4 290619 81 - 195804263 cgtaagatatctaaaatagataaactcctagaaacagagaagaatactggttgccagggtctggaagcaggggaaatgggg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75866 81 - 87586 cgtaagatatctaaaatagttaaactcctagaaatagagtagaatactggttgccagggtctggaaggaggggaaatgggg i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647122 81 + 85365473 cataaggtatctaatatagtcaaactcctagaaacagagtagaatgctggttgccagggactgaaaggaggggaaatgggg i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63417 81 + 80219 cattaggtatgtaaaatagttaaactcctagaaacagggtagaatactggttgccagggactggaaggaggggaaatgggg i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541002 81 - 189454096 cataaagtatctaaaatagtaagactcctagaaacagagtataatgctggttgccagggactggaagcaggggaaatgggg i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3655676 81 + 39453387 cataaagtatctaaaatagtaagactcctagaaacagagtataatgctggttgccagggactggaagcaggggaaatgggg i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1274699 81 + 25348628 cataaagtatctaaaatagtcagactcctagaaacagagtataatgctggtttccagggactggaagcaggggaaatgggg i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5275887 79 + 48547382 cataaagtatctaaaatagtcagactcctagaa--agagtataatgctggttgccagggactggaaggaggggaaatcgag i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 49247 81 + 294823 cataaagtatctaaaatagtcagactcctagaaacagagtataatgctggttgccagggactggaagcaggggaaatgggg i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4321967 81 + 12320365 cataagatatctaaaatagtcagactcctagaaacagagtagaatgctggttgccagggactggaaggaggggaaataggg i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775672 69 + 190850796 cataaggtacctaaaat------------agaaacagagtagaatgctggttggcagggactagaaggaggggaaatgggg i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661926 69 + 15139346 cataaggtacctaaaat------------agaaacagagtagaacgctggttgccagggactagaaggaggggaaatgggg i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496590 69 + 3802414 cataaggtgtctaaaat------------agaaacagagtagaatgctggttgccagggactagtaggaggggaagtgggg i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858748 69 + 11631747 cataaggtgcctaaaat------------agaaacagagtagaatgctggttgccagggactagaaggaggggaaatgggg i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e tarSyr2.KE948818v1 242697 90 - 1045278 I e canFam3.chr13 21793876 41 - 63241923 I a score=8202.000000 s hg38.chr9_KI270719v1_random 159552 1 + 176845 g s panTro5.chr20 31537218 1 + 66533130 g i panTro5.chr20 C 0 C 0 s panPan2.chr4 290700 1 - 195804263 g i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75947 1 - 87586 g i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647203 1 + 85365473 g i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63498 1 + 80219 g i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541083 1 - 189454096 g i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3655757 1 + 39453387 g i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1274780 1 + 25348628 g i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5275966 1 + 48547382 t i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 49328 1 + 294823 g i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4322048 1 + 12320365 g i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775741 1 + 190850796 g i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661995 1 + 15139346 g i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496659 1 + 3802414 g i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858817 1 + 11631747 g i aotNan1.NW_018493494v1 C 0 C 0 s tarSyr2.KE948818v1 802720 1 + 1045278 a i tarSyr2.KE948818v1 I 5757 N 0 e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21793876 41 - 63241923 I a score=1064932.000000 s hg38.chr9_KI270719v1_random 159553 109 + 176845 ttgctgttcaatgggtataaaattcagttataacagatgaataagttc-tagaggtctgctgtcaacagagcacctatagttaacaagattgtattgcacagttaaacat s panTro5.chr20 31537219 109 + 66533130 ttgctgttcaatgggtataaaattcagttataacagatgaataagttc-tagagatctgctgtcaacagagcacctatagttaacaagattgtattgtgcagttaaaaat i panTro5.chr20 C 0 C 0 s panPan2.chr4 290701 109 - 195804263 ttgctgttcaatgggtataaaattcagttataacagatgaataagttc-tagagatctgctgtcaacagagcacctatagttaacaagattgtattgtgcagttaaaaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 75948 109 - 87586 ttgctgttcaatgggtataaaattcagttataacagatgaataagttc-tagagatctgctgtcaacagagcacctatagttaacaagattgtattgcgcagttaaaaat i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647204 109 + 85365473 ttactgttcaatgggtataaaattcagttataacaaatgaataaattc-tagagatctgctgtcaacagagcacccatagttaacaagattgtattgcgcagttaaaaat i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63499 109 + 80219 ttgctgttcaatgggtataaaattcagttataacagatgaataagttc-tagaggtatgctgtcaacagagcacctatagttaacaagattttattgtgcagttaaaaat i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541084 109 - 189454096 ttgctgttcaatgggtataaaactcaattataatagatgaataagttc-tagagacctgcagtcaacagagcacctgtagttaacaagattgtattgtacagttaaaaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3655758 109 + 39453387 ttgctgttcaatgggtataaaactcaattataatagatgaataagttc-tagagatctgcagtcaacagagcacctgtagttaacaagaatgtattgtacagttaaaaat i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1274781 109 + 25348628 ttgctgttcaatgggtataaaactcaattataatagatgaataagttc-tagagatctgcagtcaacagagcacctgtacttaacaagattgtattgtacagttaaaaat i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5275967 109 + 48547382 ttgctgttcaatgggtataaaactcaattataatagatgaataagttc-tagagatctgcagtcaacagagcacctgtagttaacaagattgtattgcacagttaaaaat i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 49329 109 + 294823 ttgctgttcaatgggtataaaactcaattataatacatgaataagttc-tagagatctgcagtcaacagagcacctgtagttaacaagattgtattgtacagttaaaaat i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4322049 109 + 12320365 ttgctgttcaatgggtataaaactcagttataacagatgaataagttc-tagagatctgcagtcaacagagcacctgtagttaacaagattgtattgtgcagttaaaaat i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775742 109 + 190850796 -tgctgttcaatgggtataaaattcaattacaacaaatgaataagttcttagaggtctgctgtcaacagagcacctatagttaacaaaattgtattgtgcagttaaaatg i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14661996 107 + 15139346 -tgctgttcaatgggtataaaattcaattacaacagatgaataagttcttagaggcctgcta--aacagagcacctaaagttaacaagattgtattgtgcagttaaaaag i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496660 109 + 3802414 -ttctgttcaatgggtataaaattcaattacaacagatgaataagttcttagaggtctgctgtcaacagagcacctatagttaacaagattgtattgtgcagttaaaaag i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9858818 109 + 11631747 -tgctgttcaatgggtataaaattcaattacaacagatgaataagttcttaggggtctgctgtcaacagagcacctatagttaacaagattgtattgtgcagttaaaaag i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21793876 41 - 63241923 I a score=4446658.000000 s hg38.chr9_KI270719v1_random 159662 454 + 176845 ttattaagaggatatatctcatgttaaacatacttacttcattaaC---------AGAAAAAAATGG-----AATATTTTACACATA-AAATTACATATATGCCTGAATTTCACATTTCGTTTCACAAATTGTACTGGTGCT-AAAAAGGTATTTTTGTATTAAAAAACATCTAACTGAAGGAAAAGTTACAAATGAGTGATCATTCATAAATAAAATATAATCCTAGGG----------------------------ACCGCTGTTTTTCCA-TTTTGAATACCCTCCACAATTAGTCTTAATAATTATGTTGGCTGAATGAAAAATAATGATTTCTCAAGAGGCAATAGAAAATAGAGAATAAGTC---CATTCTTGAGAAAATTTATAATTAGTGAAAGTAATT-TTT-TCATCCTCTTTTCTTATTTAAATCTCAAGTACTCTCTGCCACTCTGTGCTCTTC-TTTCTGGGGTAAAATATGCCAGCTATCCAC--AGTCAGGG s panTro5.chr20 31537328 456 + 66533130 ttattaagaggatatgtctcatgttaaacatacttactttattaac---------agaaaaaaaTGG-----AGTATTTTACACATA-AAATTAAATATATGCCTGAATTTCACATATCGTTTCACAAATTGAACTGGTGCT-AGAAAGGTATTTTTGTATTGAAAAACATCTAACTGAATGAAAAGTTACAAATGAGTGATCATTCATAAATAAAATATAATCCTAGGG----------------------------ACCGCTGTTATTCCA-TTTTGAATACCCTCCACAATTAGTCTTAATAATTATGTTGACTCAATTCAAAATAATGATTTCTCAAGAGGCAATAGAAAGTAGAGAATAAGTC---CATTCTTGAGAAAATTTATAATTAGTCAAAGTAATT-TTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTACTCTCTGCCACTGTGTGCTCTTC-TTTCTGGGGTAAAATATGCAAGCTATCCACAGAGTCAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr4 290810 455 - 195804263 ttattaagaggatatatctcatgttaaacata-ttactttattaac---------agaaaaaaaTGG-----AGTATTTTACACATA-AAATTAAATATATGCCTGAATTTCACATATCGTTTCACAAATTGAACTGGTGCT-AGAAAGGTATTTTTGTATTGAAAAACATCTAACTGAATGAAAAGTTACAAATGAGTGATCATTCATAAATAAAATATAATCCTAGGG----------------------------ACCGCTGTTATTCCA-TTTTGAATACCCTCCACAATTAGTCTTAATAATTATGTTGACTCAATTCAAAATAATGATTTCTCAAGAGGCAATAGAAAGTAGAGAATAAGTC---CATTCTTGAGAAAATTTATAATTAGTCAAAGTAATT-TTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTACTCTCTGCCACTGTGTGCTCTTC-TTTCTGGGGTAAAATATGCCAGCTATCCACAGAGTCAGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 76057 453 - 87586 ttattaagaggatatatctcatgttaaacatacttacttcattaac---------agaaaaaaaTGG-----AATATTTTACACATA-AAATTACATATATGCCTGAATTTCACATTTCGTTTCACAAACTGTACTGGTGCT-AAAAAGGTATTTTTGTATTAAAAAACATCTAACTGAAGGAAAAGTTACAAATGAGTGATCATTCATAAATAAAATATAATCCTAGGG----------------------------ACCGCTGTT-TTCCA-TTTTGAATACCCTCCACAATTAGTCTTAATAATTATGTTGACTGAATGCAAAATAATGATTTCTCAAGAGGCAATAGAAAATAGAGAATAAGTC---CATTCTTGAGAAAATTTATAATTAGTGAAAGTAATT-TTT-TCATCCTCTTTTCTTATTTAAATCTCAAGTACTCTCTGCCACTCTGTGCTCTTC-TTTCTGGGGTAAAATATGCCAGCTATCCAC--AGTCAGGG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647313 446 + 85365473 ctatt--gaggatacgtctcacgttaaacgcacttacttcattaacagaaaagaaAGAAAAAAATGG-----AATATTTTACACATACAAATTACATATGTGCCTGAATTTCACATTTTGTTTCACAAATTGAAATGGTGCT-AAAAAGGTACTTTTGTGTTGAAAAACATCTAACTGAAGGAAAAGTTACAAATGAGTGATCATTCATAAATAAAATATAATCCCGGGG----------------------------ACTGCTGTTTTTCCA-TTTTGAATACCTTCCACAGTTAGTCTTAATAATTATGTTGAC-------------------TCTCAAGAGGCAATAGAGAGTAGAGAATAAGTC---CATTCTTGAGGAAATTTGTAATTAGTCAAAGTAAGT-TTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTGCTCTCTGCCACTCTGTGCTCTTCTTTTCTGGGACAAAATATGCCAGCTATCCACAGAGTCAGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 63608 460 + 80219 ttattaagaggctatgtctcatgttaaacgtacctacttcgttaacagaa-------aaaaaCATGG-----AATATTTTATGCATAAAAATTATGTATGTGTCTGAATTTCACATTTAGTTTCACAAATTGAACTGGTGCT-AAAAAGGTATTTTTATATTGAAAAACATGTAGCTGAAGGAGAAGTTACAAATGAGGGATCATTCATAAATAAAATACAATCCTAGGG----------------------------ACTGCTGTTTTTCTA-TTTTGAATACCCTCCACAATTAGTCTTACTAATTATGTTGATTCAATGCAAAATAATGATTTCTCGAGAGACAATAGAGAGTAGAGAATAAGTC---CATTCTTGAGAAAATTTGTAGTTAGTCAAAGTAATT-TTT-TCATCTTCTTTTCTTATTTAAACCTCAGGTACTCTCTGCCACTCTCTGCTCTTCTTTTCTGGTATAAAATATGCCAGCTATCCAGAGAGTCAGGG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541193 467 - 189454096 ctattaagagggtatttctcatgttaaacgtacttacttcattaaCAGAAAAGAAAGAAAAAAATGG-----AATATTTTACACATAAAAATTACATATATGCCTGAATTTCACATTTTGTTTCACGAATTGAAATGGTGCT-AAAAAGGTATTTTTGTACTGAAAAACATCTAATGGAAGGAAAAGGTACAAATGAGTGATCATTCATAAATAAAATATAATCCTGGGG----------------------------ATTGCTGTTTTTCCA-TTTTGAATACCTTCCACAATTAGTCTTAATAATTATGTTGACTCCATGCAAAGTAATGATTTCTCAAGAGGCAATAGAGAGCAGAGAATAAGTC---CGTTCTTGAAAAAATTTGTAATTAATCAAAGTATGT-TTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTACTCTCTGCCACTCTGTGCTCTTCTTTTCTGGGACAAAATATGCCAGCTATCCAGAGAGTCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3655867 467 + 39453387 ctattaagagggtatttctcatgttaaacgtacttacttcattaaCAGAAAAGAAAGAAAAAAATGG-----AATATTTTACACATAAAAATTACATATATGCCTGAATTTCACATTTTGTTTCACGAATTGAAATGGTGCT-AAAAAGGTATTTTTGTACTGAAAAACATCTAATGGAAGGAAAAGGTACAAATGAGTGATCATTCATAAATAAAATATAATCCTGGGG----------------------------ATTGCTGTTTTTCCA-TTTTGAATACCTTCCACAATTAGTCTTAATAATTATGTTGACTCCATGCAAAGTAATGATTTCTCAAGAGGCAATAGAGAGCAGAGAATAAGTC---CGTTCTTGAAAAAAATTGTAATTAATCAAAGTATGT-TTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTACTCTCTGCCACTCTGTGCTCTTCTTTTCTGGGACAAAATATGCCAGCTATCCAGAGAGTCAGGG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1274890 467 + 25348628 ctattaagagggtatttctcatgttaaacgtacttacttcattaaCAGAAAAGAAAGAAAAAAATGG-----AATATTTTACACATAAAAATTACATATATGCCTGAATTTCACATTTTGTTTCACGAATTGAAATGGTGCC-AAAAAGGTATTTTTGTACTGAAAATCATCTAATGGAAGGAAAAGGTACAAATGAGTGATCATTCATAAATAAAATATAATCCTGGGG----------------------------ATTGCTGTTTTTCCA-TTTTGAATACCTTCCACAATTAGTCTTAATAATTATGTTGACTCCATGCAAAGTAATGATTTCTCAAGAGGCAATAGAGAGCAGAGAATAAGTC---CGTTCTTGAAAAAATTTGTAATTAATCAAAGTATGT-TTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTACTCTCTGCCACTCTGTGCTCTTCTTTTCTGGGACAAAATATGCCAGCTATCCAGAGAGTCAGGG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5276076 467 + 48547382 ctattaagagggtatttctcatgttaaacgtacttacttcattaaCAGAAAAGAAAGAAAAAAATGG-----AATATTTTACACATAAAAATTACATATATACCTGAATTTCACATTTTGTTTCACGAATTGAAATGGTGCT-AAAAAGGTATTTTTGTACTGAAAAACATCTAATGGAAAGAAAAGGTACAAATGAGTGATCATTCATAAATAAAATATAATCCTGGGG----------------------------ATTGCTGTTTTTCCA-TTTTGAATACCTTCCACAATTAGTCTTAATAATTATGTTGACTCCATGCAAAGTAATGATTTCTCAAGAGGCAATAGAGAGTAGAGAATAAGTC---CGTTCTTGAAAGAATTTGTAATTAATCAAAGTATGT-TTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTACTCTCTGCCACTCTGTGCTCTTCTTTTCTGGGACAAAATATGCCAGCTATCCAGAGAGTCAGGG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 49438 467 + 294823 ctattaagagggtatttctcatgttaaacgtacttacttcattaaCAGAAAAGAAAGAAAAAAATGG-----AATATTTTACACATAAAAATTACATATATGCCTGAATTTCACATTTTGTTTCACAAATTGAAATGGTGCC-AAAAAGGTATTTTTGTACTGAAAATCATCTAATGGAAGGAAAAGGTACAAATGAGTGATCATTCATAAATAAAATATAATCCTGGGG----------------------------ATTGCTGTTTTTCCA-TTTTGAATACCTTCCACAATCAGTCTTAATAATTATGTTGACTCCATGCAAAGTAATGATTTCTCAAGAGGCAATAGAGAGCAGAGAATAAGTC---CATTCTTGAAAAAATTTGTAATTAATCAAAGTATGT-TTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTACTCTCTGCCACTCTGTGCTCTTCTTTTCTGGGACAAAATATGCCAGCTATCCAGAGAGTCAGGG i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4322158 467 + 12320365 ctattaagagggtatttctcatgttaaacatacttacttcattaacagaaaagaaAGAAAAAAATGG-----AATATTTTACACATAAAAATTACATACATGTCTGAATTTCACATTTTGTTTCATATATTGAAATGGTGCT-AAAAAGGTATTTTTGTACTGAAAAACGTCTAATGGAAGGAAAAGGTACATATGAGTGATCATTCATAAATAAAATATAATCCTGGGG----------------------------ATTGCTGTTTTTCCA-TTTTGAATACCTTCCACAATTAGTCTTAATAATTATGTTGACTCCAAACAAAGTAATGATTTCTCAAGAGGCAATAGAGAGTAGAGAATAAGTC---CATTCTTGAAAAAATTTGTAATTAATCAAAGTATGT-TTT-TCATCCTCTTTTCTTATTTAAACCTCAAGCACTCTCTGCCACTCTGTGCTCTTCTTTTCTGGGACAAAATATGCCAGCTATCCACAGAGTCAGGG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145775851 436 + 190850796 -tattaagaggatgggtctcatgttaaacatagttacctcattaacagaaaag------------------------------------aattacaTATATGCCTTAATCTCACATTTTGTTTCACAAATTGAAATGGTGCT-AAAAAGATATTTTTGTATTGAAACACATCTAACTGAAGGAGAAGGTACAAACGAGTGTTCATTCATAAATAAAATATAATACTGGGG----------------------------ACTGCTGTTTTTCCA-TTTTGAATACCCTCCACAGTTAGTCTTAATAATTACACTGACTCCACGCAAAATAATGATTTCTCAAGAGGCAATAGAGAGTAGACAATAAGTC---CATTCTTCAGGAAATTTGTAATTAGTCAAAGTGATTATTT-TTATCCTCTTTTCTTATTTAAACCTCAAGTACTCCCAGCCACTCTGTGCTCTTCCTTCCTGGGACAAAATAGTCCATCTATCCACAGAGTCAGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14662103 467 + 15139346 -tattaagagcgtaggtcccatgttaaacgtacttacctcattaacagaaaagaaagaaaaaaatgg-----aatactttACACATAAAAATTACATATATGCCTTAATTTCACATTGTGTTTCACAAATTGAAATGGTGCT-AAAAAGACATTTTTGTATTGAAACACATCTAACTGAAGGAAAAGGTACAAATAAGTGATCATTCATAAATAAAATATAATACTGGGG----------------------------ACTGCTGTTTTTCCA-TTTTGAATACCCTCCGCAATTAGTCTTAATAATTACCTTGACTCCATGCAAAATAATGATTTCTCAAGAGGCAATAGAATGTAGAGAATAAGTC---CATTCTTCAAGAAATTTGTAATTAGTCAAAGAGATTATTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTACTCCCAGCCACTCTGTGCTCTTCTTTTCTGGGACAAAATAGTCCAGCTATCCACAGAGTCAGGG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 496769 491 + 3802414 -tattaagaggataggcctcatgttaaacatacttacctcattaacagaaaagaaagaaaaaaacGG-----AATACTTTACACATAAAAATTACATATATGCCTTCATTTCACATTTTGTTTCACAAATTGAAATGGTGCT-AAAAAGATATTTTTGTATTG--ACACATCTAACTGAAGGAAAAGGTACAAATGAGTGATcattcataaataaaatataatactagggatacataatacaagcatacatataaaatacTGCTGTTTTTCCA-TTTTGAATACCCTCCACAATTAGTCTTAATAATTACGTTGACTGCATGCAAAATAATTATTTTTCAAGAGGAAATAGAGAGTAGAGAATAAGTC---CATTCTGCAGGAAATTTGTAATTAGTCAAAGTGATTATTT-TCATCCTCTTTTCTTATTTAAACCTCAAATACTCCCAGCCACTCTGTGCTCTTCATTTCTGGGACAAAATAGTCCAGCTATCCACAGA--TAGAG i cebCap1.NW_016107603v1 C 0 I 18 s aotNan1.NW_018493494v1 9858927 467 + 11631747 -tattaagaggataggtctcatgttaaaagtacttacctcattaacagaaaagaaagaaaaaaatgg-----aatactttACACATAAAAATTACATATATGCCTTAATTCCACATTTTGTTTCACAAATTGAAATGGTGCT-AAAAAGATATTTTTGTATTGAAACACATCTAACTGAAGGAAAAGGTACAAATGAGTGATCATTCATAAATAAAATATAATACTGAGG----------------------------ACTGCCGTTTTTCCA-TTTTGAATACCTTCCACAATTAGTCTTAATAATTACGTTGACTCCATGCAAAATAATGATTTCTCAAGAGGCAGTAGAAAGTAAAGAATAAGTC---CATTCTTCAGGAAATTTGTAATTAGTCAAAGTGATTATTT-TCATCCTCTTTTCTTATTTAAACCTCAAGTACTCCCAGCCACTCTATGCTCTTCTTTTCTGGGACCAAATAGTCCAGCTATCCACAGAGTCAGGG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21793917 427 - 63241923 TTATTGAAA----ATATCTGA----------ACTTCTGTCATTACT----------GAATAAAACTGTGTTTAAAATTTTATACATA-------------GGGCTGAATTTCACATTTTGTTCCATAGTTTTAAATGATGTTAAAAAAGGTATTTTTACATTTAAACACATCT----GAGGCAAAAGGTACAAATGAT------CTCATAAATAAAATATGATCCAGGGG----------------------------ATTGCTATTTTTCCATTTTTGACCGCCAACCACCGTTAGCCTTTAATAATATGTACACTCCCTGTAAAATAATGATTTCTCAAGAGGCAGTAAACAG----AGACAGGTCTTACTTATCTAAGCAAATTTTTATTAAATCAAAGTCATT-TTTGTCACCCTTTCTTTTTGTCCTAATCTCAGGTACTTCCTGCCACTCTGTGACACACTCCCCTGTGACACAACATCCCAGCTGTACACAGTGTCAGGG i canFam3.chr13 I 41 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I a score=46015.000000 s hg38.chr9_KI270719v1_random 160116 6 + 176845 CATTCT- s panTro5.chr20 31537784 6 + 66533130 CATTCT- i panTro5.chr20 C 0 C 0 s panPan2.chr4 291265 6 - 195804263 CATTCT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 76510 6 - 87586 CATTCT- i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647759 6 + 85365473 CATTCT- i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64068 6 + 80219 CTTTCT- i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541660 6 - 189454096 CATTCT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3656334 6 + 39453387 CATTCT- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1275357 6 + 25348628 CATTCT- i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5276543 6 + 48547382 CATTCT- i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 49905 6 + 294823 CACTCT- i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4322625 6 + 12320365 CATTCT- i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145776287 6 + 190850796 CATTCT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14662570 6 + 15139346 CATCCT- i saiBol1.JH378162 C 0 C 0 s aotNan1.NW_018493494v1 9859394 6 + 11631747 CATTCT- i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21794344 5 - 63241923 --TGCCT i canFam3.chr13 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e cebCap1.NW_016107603v1 497260 18 + 3802414 I a score=2369277.000000 s hg38.chr9_KI270719v1_random 160122 216 + 176845 CTAACCACTCCTCCTTAGAGATGTCTACAGACTTTTACTCAGCTAGACTGTCTTGTTGCCTGTCTTCATATCAACTTCGCAAGACGTGTGGACCATTCTCTTAGGCCCCTGCATGGCAGTGCATAATATATTCCATGCTAATTATCTAATGAGGTTCACTAAATTAATCTTTTATTATACCACATAAAATACTCTTAGATCTAACAGTACAAAAAT s panTro5.chr20 31537790 216 + 66533130 CTAACCACTCCTCCCTAGAGATGTCTACAGATTTTTACTCAGCTAGACTGTCTTGTTGCCTGTCTTTATATCAACTTCGCAAGACCTGTGGACCATTCTCTTAGGCCCCTGCAGGGCAGTGCATAATATATTCCATGCTAATTATCTAATGAGGCTCACTAAATTTATCTTTTATTATACCACATAAAATACTCTTAGATCTAACAGTACAAAAAT i panTro5.chr20 C 0 C 0 s panPan2.chr4 291271 216 - 195804263 CTAACCACTCCTCCCTAGAGATGTCTACAGATTTTTACTCAGCTAGACTGTCTTGTTGCCTGTCTTTATATCAACTTCGCAAGACCTGTGGACCATTCTCTTAGGCCCCTGCAGGGCAGTGCATAATATATTCCATGCTAATTATCTAATGAGGCTCACTAAATTTATCTTTTATTATACCACATAAAATACTCTTAGATCTAACAGTACAAAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 76516 215 - 87586 CTAACCACTCCTCCCTAGAGATGTCTACAGACTTTTACTCAGCTAGACTGTCTTGTTGCCTGTCTTCATATAAACTTCGCAAGA-GTGTGGACCATTCTCTTAGGCCCCTGCATGGCAGTGCATAATATATTCCATGCTAATTATCTAATGAGGTTCACTAAATTAATCTTTTATTATACCACATAAAATACTCTTAGATCTAACAGTACAAAAAT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647765 216 + 85365473 CTAACCATTCCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTAGACTGTCTCAGTGCCTGTCTTCATATCAAATTTGCAAGACCTGTGGACCATTCTCCTAGGCCCTTGCAGGGCAGTGCATAATATATTCCATGCTAATTATCTAATGAAGGTCACTAAATTATTATTTTATTATACCACATAAAATATTCTTAGATCTAACAGTACAAAAAT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64074 216 + 80219 CTAACCGCTCCTCCCTAGAGATGTCAACAGACTTTTACTCAGCTAGACTGTCTAGTTGCCTGTCTTCATATCAAATTCGCAAGACCTGTGGACCTTTCTCTTAGGCCCTTGCAGGGCAGTGCATAATATATTCCATGCTAATTATCTAATGAAGTTCACTAAGTTAATATTTTATTATACCACATAAAATATTCTTAGATCTAACAGTACAAAAAT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541666 216 - 189454096 CTAACCACTCCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTAGACTGTCTCAGTGCCTGTCTTCATATCAAATTTGCAAGACCTGTGGACCATTCTCTTAGGCCCTTGCAGGGCAGTGCATAATATATTCCATGCTAATTATCTAATGAAGGTCACTAAATTAATATTTTATTATACCACATAAAATATTCTTAGATCTAACAGTACAAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3656340 216 + 39453387 CTAACCACTCCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTAGACTGTCTCAGTGCCTGTCTTCATATCAAATTTGCAAGACCTGTGGACCATTCTCTTAGGCCCTTGCGGGGCAGTGCATAATATATTCCATGCTAATTATCTAATGAAGGTCACTAAATTAATATTTTATTATACCACATAAAATATTCTTAGATCTAACGGTACAAAAAT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1275363 216 + 25348628 CTAACCACTCCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTAGACTGTCTCAGTGCCTGTCTTCATATCAAATTTGCAAGACCTGTGGACCATTCTCTTAGGCCCTTGCAGGGCAGTGCGTAATATATTCCATGCTAATTATCTAATGAAGGTCACTAAATTAATATTTTATTATACCACATAAAATATTCTTAGATCTAACAGTACAAAAAT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5276549 216 + 48547382 CTAACCACTCCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTAGACTGTCTCAGTGCCTGTCTTCATATCAAATTTGCAAGACCTGTGGACCATTCTCTTAGGCCCTTGCAGGGCAGTGCATAATACATTCCATGCTAATTATCTAATGAAGGTCACTAAATTAATATTTTATTATACCACATAAAATATTCTTAGATCTAACAGTACAAAAAT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 49911 216 + 294823 CTAACCACTCCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTAGACTGTCTCAGTGCCTGTCTTCATATCAAATTTTCAAGACCTGTGGACCATTCTCTTAGGCCCTTGCAGGGCACTGCATAATATATTCCATGCTAATTATCTAATGAAGGTCACTAAATTAATATTTTATTATACCACATAAAATATTCTTAGATCTAACAGTACAAAAAT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4322631 216 + 12320365 CTAACCACTCCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTAGACTGTCTCAGTGCCTGTCTTCATATCAAATTTGCAACACCTGTGGACCATTCTCTTAAGCCCTTGCAGGGCAGTGCATAATATATTCCATGTTAATTATCTAATGAAAGTCACTAAATTAATATTTTATTATAGCGCATAAAATATTCTTAGATCTAACAGTACAAAAAT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145776293 216 + 190850796 CTATCCATTCCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTATACTGTCTCAGTGCCTGTCTTCATATCAAATTTCCAAGACCTGTGGACCATTCCCTTAGGCCCTTGCAGGGCAGTGCATTATATATTCCATGCTAATTATCAAATGAAGGTCACTAAATTAATATTTTATTATACCACATAAAATATTCTTAGATGTAACAGTACAAAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14662576 216 + 15139346 CTAACCACTTCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTATACTGTCTCAGCGCCTGTCTTCATATCAAATTTCCAAAACCTGTGGACCATTCCCTTAGGCCCTTGCAGGGCAGTGCATTATACATTCCATGCTAATTTTCAAATGAAGGTCACTAAATTAATATTTTATTATACCACATAAAATATTCTTAGATCTAACAGTACAAAAAT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 497278 216 + 3802414 CTAACCACTCCTCCCTAGAGATGTCAGTAGATTTTTACTCAGCTATACTGTCTCAGTGCCTGTCTTCATATCAAATTTCCAAGACCTATGGACCATTCCCTTAGGCCCTTGCAGGGCATTGCATTATATATTCCATGTTAATTTTCAAATGAAGGTCACTAAATTAATATTTTATTATACCACATAGAATATTCTTAGATCTAACAGTACAAAAAT i cebCap1.NW_016107603v1 I 18 C 0 s aotNan1.NW_018493494v1 9859400 216 + 11631747 CTAACCACTCCTCCCTAGAGATGTCAACAGATTTTTACTCAGCTATACTGTCTCAGTGCCTGTCTTCATATCAAATTTCCAAGACCTGTGGATCATTCCCCTAGGCCCTGGCAGGACAGTGCATTATATATTCCATGCTAATTATCAAATGAAGGTCACTAAATTAATATTTTATTATACCACATAAAATATTCTTAGATCTAACAGTACAAAAAT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21794349 201 - 63241923 CTAACCACTCCTCCCTTGAGGTGTTAATAGATCTTGCCTCAGTTAAACTTTCTCAGTGCCTGGCTTCCTATCAAATTTGCAAG------------TCCTCTTAGGTCCTTGAAGGGCAATGCATAATGCATTCCCTGCTAATTATC---TGAGGGTCACTAGATTAATATTTTATCACACCAGGTGAAGTATCCTTAGACCTAATAATACAAAAAT i canFam3.chr13 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I a score=119953.000000 s hg38.chr9_KI270719v1_random 160338 11 + 176845 TTCCAATTATG s panTro5.chr20 31538006 11 + 66533130 TTCCAATTACG i panTro5.chr20 C 0 C 0 s panPan2.chr4 291487 11 - 195804263 TTCCAATTACG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 76731 11 - 87586 TTCCAATTATG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647981 11 + 85365473 TTCCAATTATG i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64290 11 + 80219 TTCCAATTATG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541882 11 - 189454096 TTCCAATTATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3656556 11 + 39453387 TTCCAATTATG i macNem1.NW_012011022v1 C 0 I 15 s cerAty1.NW_012002843v1 1275579 11 + 25348628 TTCCAATTATG i cerAty1.NW_012002843v1 C 0 I 15 s chlSab2.chr27 5276765 11 + 48547382 TTCCAATTATG i chlSab2.chr27 C 0 I 15 s manLeu1.NW_012101853v1 50127 11 + 294823 TTCCAATTATG i manLeu1.NW_012101853v1 C 0 I 15 s colAng1.NW_012120821v1 4322847 11 + 12320365 TTCCAATTATG i colAng1.NW_012120821v1 C 0 I 15 s calJac3.chr3 145776509 11 + 190850796 TTCCAATTATG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107603v1 497494 11 + 3802414 TTCCAATTATG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9859616 11 + 11631747 TTCCAATTATG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21794550 11 - 63241923 TTCCAATTATG i canFam3.chr13 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e saiBol1.JH378162 14662792 0 + 15139346 C a score=61265.000000 s hg38.chr9_KI270719v1_random 160349 74 + 176845 ggccggtcgcggtggttcacgcctgtaatcccggcactttgggaggccgagatgggcggatcacgaggtcagga s panTro5.chr20 31538017 74 + 66533130 ggccgggcgcggtggttcacgcctgtaatcccagcactttgggaggtcgagacgggcggatcacgaggtcagga i panTro5.chr20 C 0 C 0 s panPan2.chr4 291498 74 - 195804263 ggccgggcgcggtggttcacgcctgtaatcccagcactttgggaggtcgagacgggcggatcacgaggtcagga i panPan2.chr4 C 0 I 20 s gorGor5.CYUI01000881v1 76742 74 - 87586 ggccgggcgcggtggttcacgcctgtaatcccagcactttgggaggccgagctgggcggatcacgaggtcagga i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64301 74 + 80219 ggctgggcacggtggctagcacctgtaatcccagcactttgggaggacgaggcgggcagatcacaatatcagga i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21794561 0 - 63241923 C e aotNan1.NW_018493494v1 9859627 0 + 11631747 C e cebCap1.NW_016107603v1 497505 0 + 3802414 C e saiBol1.JH378162 14662792 0 + 15139346 C e calJac3.chr3 145776520 0 + 190850796 C e colAng1.NW_012120821v1 4322858 15 + 12320365 I e manLeu1.NW_012101853v1 50138 15 + 294823 I e chlSab2.chr27 5276776 15 + 48547382 I e cerAty1.NW_012002843v1 1275590 15 + 25348628 I e macNem1.NW_012011022v1 3656567 15 + 39453387 I e macFas5.chr5 144541893 0 - 189454096 C e nomLeu3.chr20 42647992 0 + 85365473 C a score=98990.000000 s hg38.chr9_KI270719v1_random 160423 201 + 176845 gatcgaggccatcctgggtaacatggtgaaaccccgtctcaaccaaacatacaaaaaattagacaggtgcggtggcgggcgcctgtagtctcagctactcacaaggctgaggcaggagaacggcgtgaacccaggaggcggagcttgcggtgcgcccagattgcaccactgcactccaacctgggcgacagagggaaactc s panTro5.chr20 31538091 201 + 66533130 gatcgaggccatcctggctaacagggcgaaaccccgtcccaactaaacatacaaaaaattagccaggcgcggtggcgggcgcctgtagtcccagctactcgtgatgctgaagcaggagaatggcgtgaacccaggaggcggagcttgcagtgcgcccagattgcgccactgcactccaacctgggcgacagagggaaactc i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 76816 201 - 87586 gatcgaggccatcctgggtaacatggtgaaaccccgtctcaaccaaacatacaaaaaattagccaggtgcggtggcgggcgcctgtagtctcagctactcacaaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcggtgcgcccagattgcaccactgcactccaacctgggcgacagagggaaactc i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64375 201 + 80219 gatcaaggccatcctggttaacacggtgaaaccccatctcaactaaacatacaaaaaattagccgggaatggtggcgggcacctgtagtcccagctacttgggaggctaaggcaggaaaatggcatgaacccaggaggcggagcttgcagtgcgcccagatcaggccactgcactcccacctgggagacagagcgagactc i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e panPan2.chr4 291572 20 - 195804263 I e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21794561 0 - 63241923 C e aotNan1.NW_018493494v1 9859627 0 + 11631747 C e cebCap1.NW_016107603v1 497505 0 + 3802414 C e saiBol1.JH378162 14662792 0 + 15139346 C e calJac3.chr3 145776520 0 + 190850796 C e colAng1.NW_012120821v1 4322858 15 + 12320365 I e manLeu1.NW_012101853v1 50138 15 + 294823 I e chlSab2.chr27 5276776 15 + 48547382 I e cerAty1.NW_012002843v1 1275590 15 + 25348628 I e macNem1.NW_012011022v1 3656567 15 + 39453387 I e macFas5.chr5 144541893 0 - 189454096 C e nomLeu3.chr20 42647992 0 + 85365473 C a score=3799.000000 s hg38.chr9_KI270719v1_random 160624 14 + 176845 tgtctc------------aaaaaaaa s panTro5.chr20 31538292 26 + 66533130 tgtcgcaaaaaaaaaaaaaaaaaaaa i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 77017 8 - 87586 tgtctc------------------aa i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64576 14 + 80219 catctc------------aaaaaaaa i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s papAnu3.chrUn_NW_003941929v1 19326 14 - 27565 cgtctc------------aaaaaaaa i papAnu3.chrUn_NW_003941929v1 N 0 N 0 e panPan2.chr4 291572 20 - 195804263 I e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21794561 0 - 63241923 C e aotNan1.NW_018493494v1 9859627 0 + 11631747 C e cebCap1.NW_016107603v1 497505 0 + 3802414 C e saiBol1.JH378162 14662792 0 + 15139346 C e calJac3.chr3 145776520 0 + 190850796 C e colAng1.NW_012120821v1 4322858 15 + 12320365 I e manLeu1.NW_012101853v1 50138 15 + 294823 I e chlSab2.chr27 5276776 15 + 48547382 I e cerAty1.NW_012002843v1 1275590 15 + 25348628 I e macNem1.NW_012011022v1 3656567 15 + 39453387 I e macFas5.chr5 144541893 0 - 189454096 C e nomLeu3.chr20 42647992 0 + 85365473 C a score=10514.000000 s hg38.chr9_KI270719v1_random 160638 25 + 176845 aaaaaaaaaaaaaaaaagaaGAAAA s panTro5.chr20 31538318 25 + 66533130 aaaaaaaaaaaaaaaaaaaaaaaaa i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 77025 25 - 87586 aaaaaaaaaaaaaaaaagaagaaaa i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64590 19 + 80219 ------aaaaaaaaaaaaaaaaaaa i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e panPan2.chr4 291572 20 - 195804263 I e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21794561 0 - 63241923 C e aotNan1.NW_018493494v1 9859627 0 + 11631747 C e cebCap1.NW_016107603v1 497505 0 + 3802414 C e saiBol1.JH378162 14662792 0 + 15139346 C e calJac3.chr3 145776520 0 + 190850796 C e colAng1.NW_012120821v1 4322858 15 + 12320365 I e manLeu1.NW_012101853v1 50138 15 + 294823 I e chlSab2.chr27 5276776 15 + 48547382 I e cerAty1.NW_012002843v1 1275590 15 + 25348628 I e macNem1.NW_012011022v1 3656567 15 + 39453387 I e macFas5.chr5 144541893 0 - 189454096 C e nomLeu3.chr20 42647992 0 + 85365473 C a score=7845.000000 s hg38.chr9_KI270719v1_random 160663 11 + 176845 TTCCAATTACA s panTro5.chr20 31538343 11 + 66533130 aTCCAATTACA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 77050 11 - 87586 TTCCAATTACA i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64609 11 + 80219 TTCCAATTAAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s saiBol1.JH378162 14662792 11 + 15139346 TTCCAATTACG i saiBol1.JH378162 C 0 C 0 e panPan2.chr4 291572 20 - 195804263 I e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21794561 0 - 63241923 C e aotNan1.NW_018493494v1 9859627 0 + 11631747 C e cebCap1.NW_016107603v1 497505 0 + 3802414 C e calJac3.chr3 145776520 0 + 190850796 C e colAng1.NW_012120821v1 4322858 15 + 12320365 I e manLeu1.NW_012101853v1 50138 15 + 294823 I e chlSab2.chr27 5276776 15 + 48547382 I e cerAty1.NW_012002843v1 1275590 15 + 25348628 I e macNem1.NW_012011022v1 3656567 15 + 39453387 I e macFas5.chr5 144541893 0 - 189454096 C e nomLeu3.chr20 42647992 0 + 85365473 C a score=67735.000000 s hg38.chr9_KI270719v1_random 160674 20 + 176845 TCACTCCTTTGCATTACATC s panTro5.chr20 31538354 20 + 66533130 TAACTCCTTTGAATTACATC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 77061 20 - 87586 TCACTCCTTTGAATTACATC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42647992 20 + 85365473 TCACTCCTTTGAATTACATT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64620 20 + 80219 TCACTCCTTTGAATTACATC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541893 15 - 189454096 TCACTCCTTTATATT----- i macFas5.chr5 C 0 C 0 s calJac3.chr3 145776520 16 + 190850796 ----TCCTTTGAATTACATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14662803 20 + 15139346 TCACTCCTTTGAATTACATT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 497505 20 + 3802414 TCACTCCTTCAAATTACATT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9859627 20 + 11631747 TCACTCCTTCGAATTACATT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21794561 20 - 63241923 TTACTTCTCTGTATTAAATT i canFam3.chr13 C 0 C 0 e panPan2.chr4 291572 20 - 195804263 I e nasLar1.chr5 135775179 7055 - 174288623 I e colAng1.NW_012120821v1 4322858 15 + 12320365 I e manLeu1.NW_012101853v1 50138 15 + 294823 I e chlSab2.chr27 5276776 15 + 48547382 I e cerAty1.NW_012002843v1 1275590 15 + 25348628 I e macNem1.NW_012011022v1 3656567 15 + 39453387 I a score=372185.000000 s hg38.chr9_KI270719v1_random 160694 46 + 176845 CTAAGACTAATTTAAAGAGGGTATCACAAAAATAGAAATGATAGCG s panTro5.chr20 31538374 46 + 66533130 CTAAGGCTAATTTAAAGAGGTTATCACAAAAATAGAAATGATAGCA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 77081 46 - 87586 CTAAGACTAATTCAAAGAGGGTATCACAAAAATAGAAATGACAGCG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42648012 46 + 85365473 CTAAGGCTAATTTAAAGAGGGTGTCACAAAAATAGAAATGATAGGG i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64640 46 + 80219 TAAAGGCTAATTTAAAGAGGGTATCACAAAAATAGAAATGATAGTG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541908 44 - 189454096 CTAAGGCTAATTTAAAGAGTGTGTCACAAAAATAGAAAT--TAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3656582 44 + 39453387 CTAAGGCTAATTTAAAGAGTGTGTCACAAAAATAGAAAT--TAGGG i macNem1.NW_012011022v1 I 15 C 0 s cerAty1.NW_012002843v1 1275605 44 + 25348628 CTAAGGCTAATTTAAAGAGTGTGTCACAAAAATAGAAAT--TAGGG i cerAty1.NW_012002843v1 I 15 C 0 s chlSab2.chr27 5276791 44 + 48547382 CTAAGGCTAATTTAAAGAGTGTGTCACAAAAATAGAAAT--TAGGG i chlSab2.chr27 I 15 C 0 s manLeu1.NW_012101853v1 50153 46 + 294823 CTAAGGCTAATTTAAAGAGGATATCACAAAAATAGAAATGATAGTG i manLeu1.NW_012101853v1 I 15 C 0 s colAng1.NW_012120821v1 4322873 44 + 12320365 CTAAGGCTAATTTAAAGAGTGTGTCACAAAAATAGAAAT--TAGGG i colAng1.NW_012120821v1 I 15 C 0 s calJac3.chr3 145776536 46 + 190850796 CTAAGGCTATTTTAAAGAGGGTGTCACAAAAACAGAAATAATAGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14662823 45 + 15139346 CTAAGGCTAATTT-AAGAGGGTGTCCCAAAAATAGAAATAATAGGG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 497525 46 + 3802414 CTAAGGCTAATTTAAAGAGGGTGTCACAAAAATAGAAATAATAGGG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9859647 46 + 11631747 CTAAGGCTAATTTAAAGAGGGTGTCACAAAAATAGAAATAATAGAG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21794581 46 - 63241923 CTGGGCCTAGTTTGAGGACTCTATCAGAGCACTGGAAATGTTAGGA i canFam3.chr13 C 0 C 0 e panPan2.chr4 291572 20 - 195804263 I e nasLar1.chr5 135775179 7055 - 174288623 I a score=621814.000000 s hg38.chr9_KI270719v1_random 160740 58 + 176845 ACAGAAAATG------GTCCCAATTTTCACTGCACTGTTGCTAAGACCACCTTGCCACTCATCA s panTro5.chr20 31538420 58 + 66533130 ACAGAAAATG------GTCCCAATTTTCACTGCACTGTTGCTAAGACCACCTTGCCACTCATCA i panTro5.chr20 C 0 C 0 s panPan2.chr4 291592 58 - 195804263 acaGAAAATG------GTCCCAATTTTCACTGCACTGTTGCTAAGACCACCTTGCCACTCATCA i panPan2.chr4 I 20 C 0 s gorGor5.CYUI01000881v1 77127 58 - 87586 ACAGAAAATG------GTCCCAATTTTCACTGCACTGTTGCTAAGACCACCTTGCCACTCATCA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42648058 58 + 85365473 ACAGAAAATG------GTCCCAATTTTCACCGCACTGTTCCTAAGACCACCTTGCCACTCATCA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64686 58 + 80219 ACAGAAAATG------GTCCCAATCTTCACTGCACTGTTGCTGAGACCACCTTGCCACTCATGA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144541952 58 - 189454096 ATAGAAAATG------GTCTCAATTTTCACTGCACTGTTCCTAATACCATCTTGTCACTTATCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3656626 58 + 39453387 ATAGAAAATG------GTCCCAATTTTCACTGCACTGTTCCTAATACCATCTTGTCACTTATCA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1275649 58 + 25348628 ATAGAAAATG------GTCCCAATTTTCACTGCACTGTTCCTAAGACCATCTTGTCACTTATCA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5276835 58 + 48547382 ATAGAAAATG------GTCCCAATTTTCACTGCACTGTTCCTAAGACCATCTTGTCACTTATCA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 50199 58 + 294823 ACAGAAAATG------GTCCCAATCTTCACTGCACTGTTGCTCAGACCACCTTGCCACTCATGA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4322917 58 + 12320365 ATAAAAAATG------GTCCCAATTTTCACTGCACTGTTCCTAAGACCATCTTGTCACTTATCA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145776582 58 + 190850796 ACAGAAAATG------GTCCCAATTTTCACTGCACTGTTCCTAAGACCACCTTGTCACTCATCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14662868 58 + 15139346 ACAGAAAATG------GTCCCAATTTTCACTGCACTGTTCCTAAGACCACCTTGCCACTCAACA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 497571 58 + 3802414 ACAGAAAATG------GTCCCAATTTTCACTGCACTGTTCCTAAGACCACCTTGTCACTCATCA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9859693 58 + 11631747 ACAGAAAATG------GTCCCAATTTTCACTGCACTGTTCCTAAGACCACCTTGCCACTCATCA i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21794627 64 - 63241923 ACAGAAAATGGCACATGTCCCAATTTTAATTGAACTCTGCCTGAAATCACAAGACAGCTCATCA i canFam3.chr13 C 0 I 2 e nasLar1.chr5 135775179 7055 - 174288623 I a score=21840.000000 s hg38.chr9_KI270719v1_random 160798 2 + 176845 TT s panTro5.chr20 31538478 2 + 66533130 TT i panTro5.chr20 C 0 C 0 s panPan2.chr4 291650 2 - 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77185 2 - 87586 TT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42648116 2 + 85365473 TT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64744 2 + 80219 TT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144542010 2 - 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3656684 2 + 39453387 TT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1275707 2 + 25348628 TT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5276893 2 + 48547382 TT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 50257 2 + 294823 TT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4322975 2 + 12320365 TT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145776640 2 + 190850796 TT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14662926 2 + 15139346 TT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 497629 2 + 3802414 TT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9859751 2 + 11631747 TT i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21794691 2 - 63241923 I a score=3557833.000000 s hg38.chr9_KI270719v1_random 160800 341 + 176845 ATAGAATGCCTTTCAGGTAACATAATAAGAGCCATTTTTAAAATGgaaccttactatacccatgtgtgacaggcagag-ggactctattattattcatagtttacagatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggctaaga-cagaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGGATTGATCCAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACAATAATAGATAAGCTAATGATTTCTTTA---AT-AAAAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACATGATCAATTAATCAGATTTGGGTAG s panTro5.chr20 31538480 341 + 66533130 ATAGAATGCCTTTCAGGTAACATAATAAGAGCCATTTTTAAAATGgaactttactatacccatgtgtgacaggcagag-ggcctccattattattcatagtttacagatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggctaaga-ctgaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGAATTGGTCCAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACAATAATAGATAAGCTAATGATTTCTTTA---AT-AAAAATCTG--ATATGGCAAGTAGAATGTAACAGAATCAACATGATCAATTAAGCAGATTTGGGTAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 291652 341 - 195804263 ATAGAATGCCTTTCAGGTAACATAATAAGAGCCATTTTTAAAATGgaactttactatacccatgtgtgacaggcagag-ggcctccattattattcatagtttacagatgaagcagtt------------------agatttgcccctggtcactggcttattaaatgacaggctaaga-ctgaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGAATTGGTCCAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACAATAATAGATAAGCTAATGATTTCTTTA---AT-AAAAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACATGATCAATTAAGCAGATTTGGGTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77187 341 - 87586 ATAGAATGCCTTTCAGGTAACATAATAAGAGCCATTTTTAAAATGgaaccttactatacccatgtgtgacaggcagag-ggactctattattattcatagtttacagatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggctaaga-cagaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGGATTGATCCAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACAATAATAGATAAGCTAATGATTTCTTTA---AT-AAAAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACATGATCAATTAATCAGATTTGGGTAG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42648118 340 + 85365473 ACAGAATGCCTTTCAGGTAACATAATAAGAGCCATTTTTAAAATGgaaccttactatacctgtgtgtgacaggc--ag-gacctctattattattcatagtttacagatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggctaaga-cagaaccaagttttATTTTCAAATAAGACCATAAAGAAGAGGACTGATCCAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACTATAATTGATAAGCTAATGATTTTTTTA---ATAAAAAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACATGATCTATTAATCAGATTTGGGTAG i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 64746 337 + 80219 ATAGAATGCCTTTCAGGTAACATAAAAAGAGCCAGTGTTAAAATGgaaccttactacacccatgtgtgacaggc--ag-gacctctattattattcaaagcttacagatgaagcagtt------------------agattcggcccaggtcactggcttattaaattacaggctaaga-cagaaccaagttttattctcaaagAAGACCATAAAGAAGAACATTGATCCAAATGAATTATAA--GTTTCTTACAGCCCCAGTAGCAATAATTGATAAGCTAATGATTTCTTTA---AT-AAAAATCTG--ATAGGACAAGTAGAATGTGACAGAATCAACATGATCTATTAATCAGATTTGGGTAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144542012 339 - 189454096 ATAGAATTCCTTTCAGGTAACCTAATAAGAGCCATTTTTAAAATGgaaccttactatgcccatgtgtgacaggc--ag-gacctctaatattattcatagtttacggatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggtttaga-cagaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGGATTGATCCAAATGAATTATAAACATTTCTTACAGCCCCAGTAACAATAATTGATAAGCTAATGATTTCTTTA---AT-AAAAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACACGATCTATTAATCAGATTTGGGTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3656686 339 + 39453387 ATAGAATTCCTTTCAGGTAACCTAATAAGAGCCATTTTTAAAATGgaaccttactatgcccatgtgtgacaggc--ag-gacctctaatattattcatagtttacggatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggtttaga-cagaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGGACTGATCCAAATGAATTATAAACATTTCTTACAGCCCCAGTAACAATAATTGATAAGCTAATGATTTCTTTA---AT-AAAAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACACGATCTATTAATCAGATTTGGGTAG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1275709 339 + 25348628 ATAGAATTCCTTTCAGGTAACCTAATAAGAGTCATTTTAAAAATGgaaccttactatgcccatgtgtgacaggc--ag-gacctctaatattattcatagtttacggatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggttaaga-cagaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGGACTGATCCAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACCATAATTGATAAGCTAATGATTTCTTTA---AT-AAAAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACACGATCTATTAATCAGATTTGGGTAG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5276895 339 + 48547382 ATAGAATTCCTTTCAGGTAACCTAATAAGAGCCATTTTTAAAATGgaaccttactatgcccatgtgtgacaggc--ag-gacctctaatattattcatagtttacggatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggttaaga-cagaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGGACTGATCCAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACCATAATTGATAAGCTAATGATTTCTTTA---AT-AAAAATATG--ATATGACAAGTAGAATGTGACAGAATCAACACGATCTATTAATCAGATTTGGGTAG i chlSab2.chr27 C 0 I 5110 s manLeu1.NW_012101853v1 50259 339 + 294823 ATAGAATGCCTTTCAGGTAACATAAAAAGAGCCAGTTTTAAAATGgaaccttactatgcccatgtgtgacaggc--ag-gacctctaatattattcatagtttacggatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggttaaga-cagaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGGACTGATCCAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACAATAATTGATAAGCTAATGATTTATTTA---AT-AAAAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACACAATCTATTAATCAGATTTGGGTAG i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4322977 339 + 12320365 ATAGAATTCCTTTCAGGTAACCTAATAAGAGCCATTTTTAAAATGgaaccttactatgcccatgtgtgacaggc--ag-gacctctaatattattcatggtttatggatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggctaagg-cagaaccaagttttATTCTCAAATAAGACCATAAAGAAGAGGACTGGTCCAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACCATAACTGATAAGCTAATGATTTCTTTA---AT-AAAAATCTT--ATATGACAAGTAGAATGTGACAGAATCAACATGATCTATTAATCAGATTTGGGTAG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145776642 342 + 190850796 ATAGAATGCCTTTCAGGTAACATAATAAGAGCCATTTTTAATACAgaaccttactatacacgtgtgtgacaggc--ag-gacctctattattattcatagtttacagatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggctaaca-cagaaccaggttttATTCTCAAATAATACCATAAATAGGAGGACTGATTGAAATGAATTATAAAACTTTCTTACAGTCCCAGTAACCATAATTGATAAGGTAATGATTTCTTTATTAAT-AGTAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACATGATCTATTAATCAGATATGGGTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14662928 342 + 15139346 ATAGAATGCTTTTCAGGTAACATAATAAGAGCCATTTTTAATACAgaaccttactagacacgtgtgtgacaggc--ag-gacctctattattattcatagtttacagatgaaacagtt------------------agatttgccccaggtcactggcttattaaataacaggctaaca-cagaatgaggttttATACTCAAATAACACCATAAAGAAGAGGACTGATTGAAATGAATTATACAATTTTCTTAAAGGCCGAGAAACCATCATTGATAAGGTAATGATTTTTTTAATAAT-AGTAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACATGATCTATTAATCAGATATGGGTAG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 497631 342 + 3802414 ATAGAATGCCTTTCAGGTAACATAATAAGAGCCATTTTTAATACGgaaccttactatacacgtgtgtgacaggc--ag-gacctctattattattcatagtttacagatgaaacaatt------------------agatttgccccaggtcacaggcttattaaatgacaggccaaca-cagaaccaggttttATTCTCAAATAACACCATAAAGAAGAGGACTGATTGAAATGAATTATAAAATTTTCTTACAGCCCCAGTAACCATACTTGATAAGGTAATGATTTCTTTAATCAT-AATAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACATGATCTATTAATCAGATACGGTTAG i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9859753 341 + 11631747 ATAGAATGCCTTTCC-GTAACATAATAAAAGCCATTTTTAATACGGAACCTTACTATACAAGtgtgtgacaggc--agagacctctattattattcatagtttacagatgaagcagtt------------------agatttgccccaggtcactggcttattaaatgacaggctaaca-cagaaccaagttttATTCTCAAATAACACCATAAAGAAGAGGACTGATTGAAATGAATTATAAAATTTTCTTACAG-CCCAGTAACCATAATTGATAAGGTAATGATTTCTTTAATAAT-AATAATCTG--ATATGACAAGTAGAATGTGACAGAATCAACACGATCTATTAATCAGATATGGGTAG i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21794693 351 - 63241923 ACAGAATGCTTTCCAAGTAATAAAAtacacgt-gttattaaaatggagccttgctataaccctatgtgacaggc--ag-gaccaatgttattattcacagtttacagatgaagcagttaggttcagtggtattaaaagatttgtcccaggtcattgatttattaaataacagactaagatcagaaccaagttttAAACTTGTATAAGACTGCAAAGAAGAA-------TCAAGTGAATTATAAAATTTTCTTACAACAGCA-TGACTATAATTGGCCATTCCATAATTTCTTTA---AT-AATAATCTAATATATGGCAAAGTGGATGTGACAAAACTAATACGATCTATTGATTAGATATGGGTAA i canFam3.chr13 I 2 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I a score=35640.000000 s hg38.chr9_KI270719v1_random 161141 5 + 176845 TAGTT s panTro5.chr20 31538821 5 + 66533130 TAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr4 291993 5 - 195804263 TAGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77528 5 - 87586 TAGTT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42648458 5 + 85365473 TAGCT i nomLeu3.chr20 C 0 I 5118 s rheMac8.chrUn_NW_014841389v1 65083 4 + 80219 TAGT- i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144542351 5 - 189454096 TAGCT i macFas5.chr5 C 0 I 5106 s macNem1.NW_012011022v1 3657025 5 + 39453387 TAGCT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1276048 5 + 25348628 TAGCT i cerAty1.NW_012002843v1 C 0 C 0 s manLeu1.NW_012101853v1 50598 5 + 294823 TAGCT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4323316 5 + 12320365 TAGCT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145776984 5 + 190850796 CAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14663270 5 + 15139346 TAGTT i saiBol1.JH378162 C 0 I 2710 s cebCap1.NW_016107603v1 497973 5 + 3802414 TAGTT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9860094 5 + 11631747 TAGTT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21795044 5 - 63241923 TATTT i canFam3.chr13 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e chlSab2.chr27 5277234 5110 + 48547382 I a score=3560.000000 s hg38.chr9_KI270719v1_random 161146 1 + 176845 -T s panTro5.chr20 31538826 1 + 66533130 -t i panTro5.chr20 C 0 C 0 s panPan2.chr4 291998 1 - 195804263 -t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77533 1 - 87586 -T i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653581 1 + 85365473 -t i nomLeu3.chr20 I 5118 C 0 s rheMac8.chrUn_NW_014841389v1 65087 1 + 80219 -T i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547462 1 - 189454096 -t i macFas5.chr5 I 5106 C 0 s macNem1.NW_012011022v1 3657030 1 + 39453387 -T i macNem1.NW_012011022v1 C 0 I 5416 s cerAty1.NW_012002843v1 1276053 1 + 25348628 -T i cerAty1.NW_012002843v1 C 0 I 5099 s chlSab2.chr27 5282344 1 + 48547382 -t i chlSab2.chr27 I 5110 C 0 s manLeu1.NW_012101853v1 50603 1 + 294823 -T i manLeu1.NW_012101853v1 C 0 I 5084 s colAng1.NW_012120821v1 4323321 1 + 12320365 -T i colAng1.NW_012120821v1 C 0 I 5114 s calJac3.chr3 145776989 1 + 190850796 -T i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14665985 1 + 15139346 -t i saiBol1.JH378162 I 2710 C 0 s cebCap1.NW_016107603v1 497978 1 + 3802414 -T i cebCap1.NW_016107603v1 C 0 I 6177 s aotNan1.NW_018493494v1 9860099 1 + 11631747 -T i aotNan1.NW_018493494v1 C 0 I 6090 s canFam3.chr13 21795049 1 - 63241923 G- i canFam3.chr13 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I a score=13600.000000 s hg38.chr9_KI270719v1_random 161147 1 + 176845 G s panTro5.chr20 31538827 1 + 66533130 g i panTro5.chr20 C 0 C 0 s panPan2.chr4 291999 1 - 195804263 g i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77534 1 - 87586 G i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653582 1 + 85365473 g i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 65088 1 + 80219 G i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547463 1 - 189454096 g i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3662447 1 + 39453387 g i macNem1.NW_012011022v1 I 5416 C 0 s cerAty1.NW_012002843v1 1281153 1 + 25348628 g i cerAty1.NW_012002843v1 I 5099 C 0 s chlSab2.chr27 5282345 1 + 48547382 g i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 55688 1 + 294823 g i manLeu1.NW_012101853v1 I 5084 C 0 s colAng1.NW_012120821v1 4328436 1 + 12320365 g i colAng1.NW_012120821v1 I 5114 C 0 s calJac3.chr3 145776990 1 + 190850796 G i calJac3.chr3 C 0 I 13759 s saiBol1.JH378162 14665986 1 + 15139346 g i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504156 1 + 3802414 g i cebCap1.NW_016107603v1 I 6177 C 0 s aotNan1.NW_018493494v1 9866190 1 + 11631747 g i aotNan1.NW_018493494v1 I 6090 C 0 s canFam3.chr13 21795050 1 - 63241923 G i canFam3.chr13 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I a score=57443.000000 s hg38.chr9_KI270719v1_random 161148 6 + 176845 GTACCT s panTro5.chr20 31538828 6 + 66533130 gtagct i panTro5.chr20 C 0 C 0 s panPan2.chr4 292000 6 - 195804263 gtagct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77535 6 - 87586 GTAGCT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653583 6 + 85365473 gtagct i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 65089 6 + 80219 GTAGCT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547464 6 - 189454096 gtagct i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3662448 6 + 39453387 gtagct i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1281154 6 + 25348628 gtagct i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5282346 6 + 48547382 gtagct i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 55689 6 + 294823 gtagct i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4328437 6 + 12320365 gtagct i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14665987 6 + 15139346 gtagct i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504157 6 + 3802414 gtagct i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866191 6 + 11631747 gtagct i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21795051 6 - 63241923 GGATTT i canFam3.chr13 C 0 I 3216 e nasLar1.chr5 135775179 7055 - 174288623 I e calJac3.chr3 145776991 13759 + 190850796 I a score=1271147.000000 s hg38.chr9_KI270719v1_random 161154 166 + 176845 AAATGTTGGATGCTCTTGGACATAAAGATGACAGTATTTATGACGATAAAGATGACCATTCCACAGTTTGAGAATTTCTAC--AGAGAG----AGAGATGAAGAAAATTTCTGGAGTTATTGAAACTATGTGAAGATGAATTATTTGGTTGATGCACTGCTATCATTCTAAA s panTro5.chr20 31538834 168 + 66533130 aaatgttggatactcttggacataaagatgacaataTTTATGACGATAAAGATGACCATTCCACAGTTTCAGAATTTCTACAGAGAGAG----AGAGATGAAGAAAATTTCTGAAGTTATTGAAACTCTATGAAGACGAATTATTTGGTTGATGAACTGCTATCATTCTAAA i panTro5.chr20 C 0 C 0 s panPan2.chr4 292006 168 - 195804263 aaatattggatactcttgcacataaagatgacaataTTTATGACGATAAAGATGACCATTCCACAGTTTCAGAATTTCTACAGAGAGAG----AGAGATGAAGAAAATTTCTGAAGTTATTGAAACTCTATGAAGACGAATTATTTGGTTGATGAACTGCTATCATTCTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77541 166 - 87586 AAATGTTGGATACTCTTGGACATAAAGATGACAGTATTTATGACGATAAAGATGACCATTCCACAGTTTGAGAATTTCTAC--AGAGAG----AGAGATGAAGAAAATTTCTGAAGTTATTGAAACTGTGTGAAGATGAATTATTTGGTTGATGAACTGCTATCATTCTAAA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653589 161 + 85365473 aaatgttggatactcatggacataaagatgacaataTTCATGATGACAAGGATAACCATTTCACAGTTTCAGAATTTCTAC------AG----AAAGATGAAGAAAATTTCTGAAGTTATTGAAACTGTGTG-AGACAAATTATTTGGTTGATAAATTACTATCATTCTAAA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 65095 166 + 80219 AAATTTTGGATACTCCTGGACATAAAGATGACAATATTTATGACTATAAAGATGGCCATTCCACAGTTTCAGAATTTCTAC------AGAGAAAGAGATGAAGAAACTTTCTGAAGTGAATGAAACTGTGTGAAGATGAATTATTTGGTTGATAAACTGCTGTCATTCTAAA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547470 161 - 189454096 aaatgttggatactcatgtacataaaaatgacaataTTCATGACGACAAAGATGACCATTCCACAGTTTCAAAATTTCTAC------AG----AAAGATG-AGAAAATTTCTGAAGTTATTGAAACTGTATGAAGACAAATTATTTGGTTGATAAATTACTATCATTCTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3662454 161 + 39453387 aaatgttggatactcatgtacataaaaatgacaataTTCATGACGACAAAGATGACCATTCCACAGTTTCAAAATTTCTAC------AG----AAAGATG-AGAAAATTTCTGAAGTTATTGAAACTGTATGAAGACAAATTATTTGGTTGATAAATTACTATCATTCTAAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1281160 161 + 25348628 aaatgttggatactcatgtacataaaaatgacaataTTCATGACGACAAAGATGACCATTCCACAGTTTCAGAATTTCTAC------AG----AAAGATG-AGAAAATTTCTGAAGTTATTGAAACTGTATGAAGACAAATTATTTGGTTGATAAATTACTATCATTCTAAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5282352 157 + 48547382 aaatgttggatactcatgtacataaaaatgacaataTTCATGATGACAAAGATGACCATTCCACAGTTTCAAAATTTCTAC------AG----AAAGATG-AGAAAATTTCTGAAGTTATTGAAACTGTATGAAGACAAATTATTTGGTTGATA----ATTATCATTCTAAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 55695 161 + 294823 aaatgttggatactcatggacataaagatgacaataTTTATGACTATAAAGATGACCATTCCACAGTTTCAAAATTTCTAC------AG----AAAGATG-AGAAAATTTCTGAAGTTATTGAAACTGTATGAAGACAAATTATTTGGTTGATAAATTACTATCATTCTAAA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4328443 161 + 12320365 aaatgttggatactcatgtacataaaaatgacaataTTCATGATGACAAAGATGACCATTCCACAGTTTCAGAATTTCTAC------AG----AAAGATG-AGAAAATTTCTGCAGTTATTGAAACTGTGTGAAGACAAATTATTTGTTTGATAAATTACTATCATTCTAAA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14665993 160 + 15139346 aaatgttggatactaatggacataaatataacaataTTTATGATGACAAAGATGACAATTCTACCATTTCAGAATTTCTAC------AG----ACAAATTAAGAAAATTTCTG--GTTATTGAAACTATATGAAGACAAATTATTTGGCTGATAAACTGCTATCATTCTAAA i saiBol1.JH378162 C 0 I 173 s cebCap1.NW_016107603v1 504163 162 + 3802414 aaatgttgtatactaatggacataaagatgacaataTTTATGATAACAAAGATGATAATTCCACTGTTTCAGAATTTCTAC------AG----ACAGATTAAGAAAATTTCTGAAGTTATTGAAACTGTATGAAGACAAATTATTTGGTTGATAAATTGCTATCATTCTAAA i cebCap1.NW_016107603v1 C 0 I 178 s aotNan1.NW_018493494v1 9866197 158 + 11631747 aaatgttggatactaatggacataaagatgacaataTTTATTATGACAAAGATGATAATTCCACCATTTCAGAATTTCTAC------GG----ATA----AAGAAAATTTCTGAAGTTATTGAAACTGTATGAAGATAAATTATTTGGTTGATAAGTTGCTATCATTCTAAA i aotNan1.NW_018493494v1 C 0 I 181 e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I a score=6006.000000 s hg38.chr9_KI270719v1_random 161320 1 + 176845 T s panTro5.chr20 31539002 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr4 292174 1 - 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77707 1 - 87586 T i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653750 1 + 85365473 T i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 65261 1 + 80219 T i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547631 1 - 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3662615 1 + 39453387 T i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1281321 1 + 25348628 T i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5282509 1 + 48547382 T i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 55856 1 + 294823 T i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4328604 1 + 12320365 T i colAng1.NW_012120821v1 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e aotNan1.NW_018493494v1 9866355 181 + 11631747 I e cebCap1.NW_016107603v1 504325 178 + 3802414 I e saiBol1.JH378162 14666153 173 + 15139346 I e calJac3.chr3 145776991 13759 + 190850796 I a score=11460.000000 s hg38.chr9_KI270719v1_random 161321 2 + 176845 GG s panTro5.chr20 31539003 2 + 66533130 GG i panTro5.chr20 C 0 C 0 s panPan2.chr4 292175 2 - 195804263 GG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77708 2 - 87586 GG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653751 2 + 85365473 GG i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 65262 2 + 80219 TG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547632 2 - 189454096 GG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3662616 2 + 39453387 GG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1281322 2 + 25348628 GG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5282510 2 + 48547382 GG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 55857 2 + 294823 GG i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4328605 2 + 12320365 GG i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14666326 2 + 15139346 ga i saiBol1.JH378162 I 173 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e aotNan1.NW_018493494v1 9866355 181 + 11631747 I e cebCap1.NW_016107603v1 504325 178 + 3802414 I e calJac3.chr3 145776991 13759 + 190850796 I a score=112386.000000 s hg38.chr9_KI270719v1_random 161323 13 + 176845 ACTTCACTTTCTG s panTro5.chr20 31539005 13 + 66533130 ACCTCACTTTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr4 292177 13 - 195804263 ACCTCACTTTCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77710 13 - 87586 ACTTCACTTTCTG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653753 13 + 85365473 ACTTCACTTTCTG i nomLeu3.chr20 C 0 I 5 s rheMac8.chrUn_NW_014841389v1 65264 13 + 80219 ACTTCACTTTCTG i rheMac8.chrUn_NW_014841389v1 C 0 I 3 s macFas5.chr5 144547634 13 - 189454096 ACTTCATTTTCTG i macFas5.chr5 C 0 I 20 s macNem1.NW_012011022v1 3662618 13 + 39453387 ACTTCATTTTCTG i macNem1.NW_012011022v1 C 0 I 47 s cerAty1.NW_012002843v1 1281324 13 + 25348628 ACTTCATTTTCTG i cerAty1.NW_012002843v1 C 0 I 24 s chlSab2.chr27 5282512 13 + 48547382 ACTTCATTTTCTG i chlSab2.chr27 C 0 I 6 s manLeu1.NW_012101853v1 55859 13 + 294823 ACTTCATTTTCTG i manLeu1.NW_012101853v1 C 0 I 6 s colAng1.NW_012120821v1 4328607 13 + 12320365 AATTCATTTTCTG i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14666328 13 + 15139346 aCTTCCCTTTCTG i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504503 13 + 3802414 ACTTCACTTTCTG i cebCap1.NW_016107603v1 I 178 C 0 s aotNan1.NW_018493494v1 9866536 13 + 11631747 ACTTCATTTTCTG i aotNan1.NW_018493494v1 I 181 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I a score=15059.000000 s hg38.chr9_KI270719v1_random 161336 3 + 176845 A-AA s panTro5.chr20 31539018 3 + 66533130 A-AA i panTro5.chr20 C 0 C 0 s panPan2.chr4 292190 3 - 195804263 A-AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77723 3 - 87586 A-AA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653771 3 + 85365473 A-AA i nomLeu3.chr20 I 5 C 0 s rheMac8.chrUn_NW_014841389v1 65280 2 + 80219 --AA i rheMac8.chrUn_NW_014841389v1 I 3 C 0 s macFas5.chr5 144547667 2 - 189454096 --aa i macFas5.chr5 I 20 C 0 s macNem1.NW_012011022v1 3662678 2 + 39453387 --aa i macNem1.NW_012011022v1 I 47 C 0 s cerAty1.NW_012002843v1 1281361 2 + 25348628 --aa i cerAty1.NW_012002843v1 I 24 C 0 s papAnu3.chr5 138913639 2 - 178775436 --aa i papAnu3.chr5 N 0 C 0 s chlSab2.chr27 5282531 3 + 48547382 a-aa i chlSab2.chr27 I 6 C 0 s manLeu1.NW_012101853v1 55878 3 + 294823 a-aa i manLeu1.NW_012101853v1 I 6 C 0 s colAng1.NW_012120821v1 4328620 3 + 12320365 C-AA i colAng1.NW_012120821v1 C 0 I 1 s saiBol1.JH378162 14666341 3 + 15139346 C-AA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504516 4 + 3802414 CAAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866549 3 + 11631747 C-AA i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135775179 7055 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I a score=-8008.000000 s hg38.chr9_KI270719v1_random 161339 4 + 176845 -AAA-T s panTro5.chr20 31539021 4 + 66533130 -AAA-T i panTro5.chr20 C 0 C 0 s panPan2.chr4 292193 4 - 195804263 -AAA-T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77726 4 - 87586 -AAA-T i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653774 4 + 85365473 -AAA-A i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 65282 3 + 80219 -AAA-- i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547669 3 - 189454096 -aaa-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3662680 3 + 39453387 -aaa-- i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1281363 3 + 25348628 -gaa-- i cerAty1.NW_012002843v1 C 0 C 0 s papAnu3.chr5 138913641 3 - 178775436 -aaa-- i papAnu3.chr5 C 0 N 0 s chlSab2.chr27 5282534 4 + 48547382 -aaac- i chlSab2.chr27 C 0 I 17 s manLeu1.NW_012101853v1 55881 4 + 294823 -aaac- i manLeu1.NW_012101853v1 C 0 I 10 s nasLar1.chr5 135782234 3 - 174288623 -AAA-- i nasLar1.chr5 I 7055 C 0 s colAng1.NW_012120821v1 4328624 3 + 12320365 -AAA-- i colAng1.NW_012120821v1 I 1 C 0 s saiBol1.JH378162 14666344 4 + 15139346 AAGA-- i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504520 4 + 3802414 AAAA-- i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866552 4 + 11631747 AAGA-- i aotNan1.NW_018493494v1 C 0 C 0 e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I a score=16935.000000 s hg38.chr9_KI270719v1_random 161343 2 + 176845 AA s panTro5.chr20 31539025 2 + 66533130 AA i panTro5.chr20 C 0 C 0 s panPan2.chr4 292197 2 - 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77730 2 - 87586 AA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653778 2 + 85365473 CA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 65285 2 + 80219 AG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547672 2 - 189454096 aa i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3662683 2 + 39453387 aa i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1281366 2 + 25348628 aa i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5282555 2 + 48547382 aa i chlSab2.chr27 I 17 C 0 s manLeu1.NW_012101853v1 55895 2 + 294823 aa i manLeu1.NW_012101853v1 I 10 C 0 s nasLar1.chr5 135782237 2 - 174288623 AA i nasLar1.chr5 C 0 I 2233 s colAng1.NW_012120821v1 4328627 2 + 12320365 AA i colAng1.NW_012120821v1 C 0 C 0 s saiBol1.JH378162 14666348 2 + 15139346 AA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504524 2 + 3802414 AA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866556 2 + 11631747 AA i aotNan1.NW_018493494v1 C 0 C 0 e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I a score=447853.000000 s hg38.chr9_KI270719v1_random 161345 69 + 176845 CGCATAAGGATGAAATATGTATTGAATGAAAATTATA-TTTTGTTTTTCC---ATTTTTTACCTAATAAAAAA s panTro5.chr20 31539027 69 + 66533130 CCCATAAGGATGAAATATGTATTGAATGAAAATTATA-TTTTGTTTTTTC---ATTTTTTACCTAATAAAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr4 292199 69 - 195804263 CCCATAAGGATGAAATATGTATTGAATGAAAATTATA-TTTTGTTTTTTC---ATTTTTTACCTAATAAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77732 68 - 87586 CGCATAAGGATGAAATATGTATTGAATGAAAATTATA-TTTTGTTTTTCC---ATTTTTTACCTAAT-AAAAA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42653780 68 + 85365473 CACATAAGGATGAAATATGTATTGAATGAAAATTATA-TTTTGTTTTTCC---A-TTTTCACATAATAAAAAA i nomLeu3.chr20 C 0 I 649 s rheMac8.chrUn_NW_014841389v1 65287 68 + 80219 TGCATAAGGATGAAATATGTATTGAATGAAAATTATC-TTTTGTTTTTCC---ATTTTTTACGTAA-CAAAAA i rheMac8.chrUn_NW_014841389v1 C 0 I 1 s macFas5.chr5 144547674 68 - 189454096 caCATAAGGATGAAATACGTATTGAATGAAAATTATA-ATTTGTTTTCCC---A-TTTTTACATAATTAAAAA i macFas5.chr5 C 0 I 1 s macNem1.NW_012011022v1 3662685 68 + 39453387 CACATAAGGATGAAATATTTATTGGATGAAAATTATA-ATTTGTTTTCCC---A-TTTTTACATAATTAAAAA i macNem1.NW_012011022v1 C 0 I 1 s cerAty1.NW_012002843v1 1281368 68 + 25348628 CACATAAGGATGAAATACGTATTGGATGAAAATTATA-ATTTGTTTTCCC---A-TTTTTACATAATTAAAAA i cerAty1.NW_012002843v1 C 0 I 1 s chlSab2.chr27 5282557 68 + 48547382 CACATAAGGATGAAATACATATTGGATGAAAATTATA-ATTTGTTTTCCC---A-TTTTTACATAATAAAAAA i chlSab2.chr27 C 0 I 1 s manLeu1.NW_012101853v1 55897 68 + 294823 CACATAAGGATGAAATACGTATTGGATGAAAATTATA-ATTTGTTTTCCC---A-TTTTTACATAATTTAAAA i manLeu1.NW_012101853v1 C 0 I 1 s colAng1.NW_012120821v1 4328629 65 + 12320365 --AATAAGGATAAAATATATACTGGATGAAAATTATA-ATTTGTTTTCCC---A-TTTTTACATAATT-AAAA i colAng1.NW_012120821v1 C 0 I 1 s saiBol1.JH378162 14666350 70 + 15139346 AGCATAAGGATGaaatatttatttaatgaaatttatatttttgttttttc---tttttttacataataaaaaa i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504526 65 + 3802414 AGCATAAGGATGAAA----TATTTAATGAAATTCATATTTTTGTTTTGT----TTTTTTTACATAATAAAAAA i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866558 73 + 11631747 AGCATAAGGATGAAATATTTATTTAATGAAAtttatatttttgttttttcatttttttttACATAATAAAAAA i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I a score=682428.000000 s hg38.chr9_KI270719v1_random 161414 120 + 176845 ATCAGAAAAACAGATTTTTTTTAAAAAAAAGAaaagatgactgtaatagacaatggagactagtagaggcagtagagagggcagccagggttgaaaaactacagggtactaagcttcata s panTro5.chr20 31539096 119 + 66533130 ATCAGAAAAACAGATTTTTTTT-AAAAAAAGAAAACATGACTataatagacaatggagactagtagaggcagtagggagggcagccagggttgaaaaactacagggtactaagcttcgta i panTro5.chr20 C 0 C 0 s panPan2.chr4 292268 119 - 195804263 ATCAGAAAAACAGATTTTTTTT-AAAAAAAGAAAACATGACTataatagacaatggagactagtagaggcagtagggagggcagccagggttgaaaaactacagggtactaagcttcgta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77800 113 - 87586 ATCAGAAAAACAGATTTTTTTT-AAAAaaagaa-----gactataatagacaatggagactagtagaggcagtagggagggcagccagggttgaaaaactaca-ggtactaagcttcgta i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 65356 117 + 80219 ATCAGAAAAACAGA--TTAAAA-ACAAAAAGAaaagatgacaataatagacaatggagactactagaggcagtagggagggcagccagggttgaaaaactacagggtactaagcttcata i rheMac8.chrUn_NW_014841389v1 I 1 C 0 s macFas5.chr5 144547743 110 - 189454096 ATCAGACAAACAGA----AATT-AAAAAAAGAaaagatgacaataatagacaatggagactactagaggtgttagggagcacagccaggattgaaaaactactgggtactaagct----- i macFas5.chr5 I 1 C 0 s macNem1.NW_012011022v1 3662754 115 + 39453387 ATCAGACAAACAGA----AATT-AAAAAAAGAaaagatgacaataatagacaatggagactactagaggtgttagggagcacagccaggattgaaaaactactgggtactaagcttcata i macNem1.NW_012011022v1 I 1 I 1569 s cerAty1.NW_012002843v1 1281437 115 + 25348628 ATCAGACAAACAGA----AATT-AAAAAAAGAaaagatgacaataatagacaatggagactactagaggtgttagggagcacagccaggattgaaaaactactgggtactaagcttcata i cerAty1.NW_012002843v1 I 1 I 1575 s chlSab2.chr27 5282626 115 + 48547382 ATCAGACAAACAGA----AATT-AAAAAAAGAaaagatgacaataatagacaatggagactactagaggtgttagggagcacagccaggattgaaaaactactgggtactaagcttcata i chlSab2.chr27 I 1 I 1571 s manLeu1.NW_012101853v1 55966 115 + 294823 ATCAGACAAACAGA----AATT-AAAAAAAGAaaagatgacaataatggacaacggagactactagaggtgttagggagcacagccaggattgaaaaactactgggtactaagcttcata i manLeu1.NW_012101853v1 I 1 I 1573 s colAng1.NW_012120821v1 4328695 115 + 12320365 GTCAGACAAACAGA----AATT-AAAAAAAGAaaagatgacaatgatagacaatggagactactagaggtgttagggagcgcagccaggattgaaaacatactaggtactaagtttcata i colAng1.NW_012120821v1 I 1 C 0 s saiBol1.JH378162 14666420 112 + 15139346 atCAGACAAACAGA----AATT---AAAAGGAaaagatggcaataacagacgatggagagcactagaggcagtagggagagcag-tagagttgaaaaactattaagtactaatgtttaga i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504591 112 + 3802414 ATCAGACAAACAGA----AATT---AAAAAGAaaagatggcaataacagacaatggagaggactagaggctgtagggagagcag-cagagttgaaaaattattaagagctaaggtttaca i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866631 112 + 11631747 ATCAGACAAACAGA----AATT---AAAAAGAaaagatggcaataacaggcaatggagaggactagaggcagtagggagagcag-cagagttgaaaaactatcaagtactaaggtttata i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I e nomLeu3.chr20 42653848 649 + 85365473 I a score=4490.000000 s hg38.chr9_KI270719v1_random 161534 2 + 176845 tc s panTro5.chr20 31539215 2 + 66533130 tc i panTro5.chr20 C 0 C 0 s panPan2.chr4 292387 2 - 195804263 tc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77913 2 - 87586 tc i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 65473 2 + 80219 cc i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s colAng1.NW_012120821v1 4328810 2 + 12320365 tc i colAng1.NW_012120821v1 C 0 I 1566 s saiBol1.JH378162 14666532 2 + 15139346 cc i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504703 2 + 3802414 cc i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866743 2 + 11631747 cc i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I e manLeu1.NW_012101853v1 56081 1573 + 294823 I e chlSab2.chr27 5282741 1571 + 48547382 I e cerAty1.NW_012002843v1 1281552 1575 + 25348628 I e macNem1.NW_012011022v1 3662869 1569 + 39453387 I e macFas5.chr5 144547853 0 - 189454096 C e nomLeu3.chr20 42653848 649 + 85365473 I a score=159464.000000 s hg38.chr9_KI270719v1_random 161536 64 + 176845 tgcatgatgagatcagtcataccccaaacctcagcatggcacaatatacccgggtaacaaacct s panTro5.chr20 31539217 64 + 66533130 tgcatgatgagatcagtcataccccaaacctcagcatggcacaatatacccaggtaacaaacct i panTro5.chr20 C 0 C 0 s panPan2.chr4 292389 64 - 195804263 tgcatgatgagatcagtcataccccaaacctcagcatggcacaatatacccaggtaacaaacct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 77915 64 - 87586 tgcatgatgagatcagtcataaaccaaacctcagcatggcacaatatacccgggtaacaaacct i gorGor5.CYUI01000881v1 C 0 I 1152 s rheMac8.chrUn_NW_014841389v1 65475 64 + 80219 tgcgtgatgagatccatcataccccaaacctcagcatggcacaaaatacccaggaaacaaagct i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547853 48 - 189454096 ----------------tcataccccaaacatcaacatcacacaatatatgcaggtaacaaacct i macFas5.chr5 C 0 C 0 s saiBol1.JH378162 14666534 64 + 15139346 taggtgacatgatcaatcataccccaaacctcagcatcacacaatatacctaggtaacaaacat i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504705 64 + 3802414 tgggtgatgagaccaatcataccccaaacctcagcatcacacaatatacctaggtaacaaacct i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866745 64 + 11631747 tgggtgatgagatcagtcataccccaaacctcagcatcacacaatatacctaggtatcaaactt i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I e colAng1.NW_012120821v1 4328812 1566 + 12320365 I e manLeu1.NW_012101853v1 56081 1573 + 294823 I e chlSab2.chr27 5282741 1571 + 48547382 I e cerAty1.NW_012002843v1 1281552 1575 + 25348628 I e macNem1.NW_012011022v1 3662869 1569 + 39453387 I e nomLeu3.chr20 42653848 649 + 85365473 I a score=7200.000000 s hg38.chr9_KI270719v1_random 161600 2 + 176845 gc s panTro5.chr20 31539281 2 + 66533130 gc i panTro5.chr20 C 0 C 0 s panPan2.chr4 292453 2 - 195804263 gc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79131 2 - 87586 GC i gorGor5.CYUI01000881v1 I 1152 C 0 s rheMac8.chrUn_NW_014841389v1 65539 2 + 80219 gc i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144547901 2 - 189454096 gc i macFas5.chr5 C 0 I 1525 s saiBol1.JH378162 14666598 2 + 15139346 gc i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504769 2 + 3802414 gc i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866809 2 + 11631747 gc i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I e colAng1.NW_012120821v1 4328812 1566 + 12320365 I e manLeu1.NW_012101853v1 56081 1573 + 294823 I e chlSab2.chr27 5282741 1571 + 48547382 I e cerAty1.NW_012002843v1 1281552 1575 + 25348628 I e macNem1.NW_012011022v1 3662869 1569 + 39453387 I e nomLeu3.chr20 42653848 649 + 85365473 I a score=2800.000000 s hg38.chr9_KI270719v1_random 161602 1 + 176845 C s panTro5.chr20 31539283 1 + 66533130 c i panTro5.chr20 C 0 I 1560 s panPan2.chr4 292455 1 - 195804263 c i panPan2.chr4 C 0 I 1560 s gorGor5.CYUI01000881v1 79133 1 - 87586 C i gorGor5.CYUI01000881v1 C 0 I 1 s rheMac8.chrUn_NW_014841389v1 65541 1 + 80219 c i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s saiBol1.JH378162 14666600 1 + 15139346 c i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 504771 1 + 3802414 c i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9866811 1 + 11631747 c i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I e colAng1.NW_012120821v1 4328812 1566 + 12320365 I e manLeu1.NW_012101853v1 56081 1573 + 294823 I e chlSab2.chr27 5282741 1571 + 48547382 I e cerAty1.NW_012002843v1 1281552 1575 + 25348628 I e macNem1.NW_012011022v1 3662869 1569 + 39453387 I e macFas5.chr5 144547903 1525 - 189454096 I e nomLeu3.chr20 42653848 649 + 85365473 I a score=9555.000000 s hg38.chr9_KI270719v1_random 161603 1 + 176845 T s panTro5.chr20 31540844 1 + 66533130 T i panTro5.chr20 I 1560 C 0 s panPan2.chr4 294016 1 - 195804263 T i panPan2.chr4 I 1560 C 0 s gorGor5.CYUI01000881v1 79135 1 - 87586 T i gorGor5.CYUI01000881v1 I 1 C 0 s nomLeu3.chr20 42654497 1 + 85365473 T i nomLeu3.chr20 I 649 C 0 s rheMac8.chrUn_NW_014841389v1 65542 1 + 80219 t i rheMac8.chrUn_NW_014841389v1 C 0 I 531 s macFas5.chr5 144549428 1 - 189454096 T i macFas5.chr5 I 1525 C 0 s macNem1.NW_012011022v1 3664438 1 + 39453387 T i macNem1.NW_012011022v1 I 1569 C 0 s cerAty1.NW_012002843v1 1283127 1 + 25348628 T i cerAty1.NW_012002843v1 I 1575 C 0 s chlSab2.chr27 5284312 1 + 48547382 T i chlSab2.chr27 I 1571 C 0 s manLeu1.NW_012101853v1 57654 1 + 294823 T i manLeu1.NW_012101853v1 I 1573 C 0 s colAng1.NW_012120821v1 4330378 1 + 12320365 T i colAng1.NW_012120821v1 I 1566 C 0 s saiBol1.JH378162 14666601 1 + 15139346 t i saiBol1.JH378162 C 0 I 1560 s cebCap1.NW_016107603v1 504772 1 + 3802414 t i cebCap1.NW_016107603v1 C 0 I 1572 s aotNan1.NW_018493494v1 9866812 1 + 11631747 t i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e calJac3.chr3 145776991 13759 + 190850796 I a score=9555.000000 s hg38.chr9_KI270719v1_random 161604 1 + 176845 A s panTro5.chr20 31540845 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr4 294017 1 - 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79136 1 - 87586 A i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654498 1 + 85365473 A i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144549429 1 - 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664439 1 + 39453387 A i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283128 1 + 25348628 A i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284313 1 + 48547382 A i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 57655 1 + 294823 A i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4330379 1 + 12320365 A i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145790750 1 + 190850796 A i calJac3.chr3 I 13759 C 0 s saiBol1.JH378162 14668162 1 + 15139346 A i saiBol1.JH378162 I 1560 C 0 s cebCap1.NW_016107603v1 506345 1 + 3802414 A i cebCap1.NW_016107603v1 I 1572 C 0 s aotNan1.NW_018493494v1 9866813 1 + 11631747 a i aotNan1.NW_018493494v1 C 0 I 4190 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e rheMac8.chrUn_NW_014841389v1 65543 531 + 80219 I a score=86648.000000 s hg38.chr9_KI270719v1_random 161605 12 + 176845 GACATTTGTGTA s panTro5.chr20 31540846 12 + 66533130 GACATTTGTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr4 294018 12 - 195804263 GACATTTGTGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79137 12 - 87586 GACATTTGTGTA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654499 12 + 85365473 GACATTTGTGTA i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144549430 12 - 189454096 GACATTTGTATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664440 12 + 39453387 GACATTTGCATA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283129 12 + 25348628 GACGTTTGTATA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284314 12 + 48547382 GACATTTGTATA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 57656 12 + 294823 GACATTTGTATA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4330380 12 + 12320365 GACATTTGTATA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145790751 12 + 190850796 GACCTTTGTGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14668163 12 + 15139346 GACCTTTGTGTA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 506346 12 + 3802414 GACCTTTGTGTA i cebCap1.NW_016107603v1 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e aotNan1.NW_018493494v1 9866814 4190 + 11631747 I e rheMac8.chrUn_NW_014841389v1 65543 531 + 80219 I a score=241935.000000 s hg38.chr9_KI270719v1_random 161617 29 + 176845 AAATGAGACGATTGCAGGGTAGTTTTAAA s panTro5.chr20 31540858 29 + 66533130 AAATGAGATGATTGCAGGGTAGTTTTAAA i panTro5.chr20 C 0 C 0 s panPan2.chr4 294030 29 - 195804263 AAATGAGATGATTGCAGGGTAGTTTTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79149 29 - 87586 AAATGAGATGATTGCAGGGTAGTTTTAAA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654511 29 + 85365473 AAATGAGATGATTGCAGGGAAGTTTTAAA i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144549442 29 - 189454096 AAATGAGATGAGTGCAAGGTAGTTTTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664452 29 + 39453387 AAATGAGATGAGTGCAAGGTAGTTTTAAA i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283141 29 + 25348628 AAATGAGATGAGTGCAAGGTAGTTTTAAA i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284326 29 + 48547382 AAATGAGATGAGTGTAAGGTAGTTTTAAA i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 57668 29 + 294823 AAATGAGATGAGTCCAAGGTTGTTTTAAA i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4330392 29 + 12320365 AAATGAGATGAGTGTAAAATAGTTTTAAA i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145790763 29 + 190850796 AAATGAGATAATTTCAGGGTAGCTTTAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14668175 29 + 15139346 AAATGAGATGATTGCAAGGTAGTTTTAAA i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 506358 29 + 3802414 AAATGAGATGACTGCAGGGTAGTTTTAAA i cebCap1.NW_016107603v1 C 0 I 2618 s aotNan1.NW_018493494v1 9871004 29 + 11631747 AAATGAGATGATTGCAGGGTAGTTTTAAA i aotNan1.NW_018493494v1 I 4190 I 2367 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e rheMac8.chrUn_NW_014841389v1 65543 531 + 80219 I a score=12223.000000 s hg38.chr9_KI270719v1_random 161646 2 + 176845 AG s panTro5.chr20 31540887 2 + 66533130 AG i panTro5.chr20 C 0 C 0 s panPan2.chr4 294059 2 - 195804263 AG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79178 2 - 87586 AG i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654540 2 + 85365473 AG i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144549471 2 - 189454096 AG i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664481 2 + 39453387 AG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283170 2 + 25348628 AG i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284355 2 + 48547382 AG i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 57697 2 + 294823 AG i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4330421 2 + 12320365 AG i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145790792 2 + 190850796 GG i calJac3.chr3 C 0 I 2349 s saiBol1.JH378162 14668204 2 + 15139346 GG i saiBol1.JH378162 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e aotNan1.NW_018493494v1 9871033 2367 + 11631747 I e cebCap1.NW_016107603v1 506387 2618 + 3802414 I e rheMac8.chrUn_NW_014841389v1 65543 531 + 80219 I a score=54598.000000 s hg38.chr9_KI270719v1_random 161648 7 + 176845 TCATTCC s panTro5.chr20 31540889 7 + 66533130 TCATGCC i panTro5.chr20 C 0 C 0 s panPan2.chr4 294061 7 - 195804263 TCATGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79180 7 - 87586 TCATTCC i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654542 7 + 85365473 TCATTTC i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144549473 7 - 189454096 TCATTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664483 7 + 39453387 TCATTTC i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283172 7 + 25348628 TCATTTC i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284357 7 + 48547382 TTGTTTC i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 57699 7 + 294823 TCATTTC i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4330423 7 + 12320365 TCATTTC i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145793143 7 + 190850796 TCATTTC i calJac3.chr3 I 2349 C 0 s saiBol1.JH378162 14668206 7 + 15139346 TCATTTC i saiBol1.JH378162 C 0 I 2363 s cebCap1.NW_016107603v1 509005 7 + 3802414 TCATTTC i cebCap1.NW_016107603v1 I 2618 C 0 s aotNan1.NW_018493494v1 9873400 7 + 11631747 TCATTTC i aotNan1.NW_018493494v1 I 2367 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e rheMac8.chrUn_NW_014841389v1 65543 531 + 80219 I a score=29627.000000 s hg38.chr9_KI270719v1_random 161655 4 + 176845 CCTT s panTro5.chr20 31540896 4 + 66533130 CTTT i panTro5.chr20 C 0 C 0 s panPan2.chr4 294068 4 - 195804263 CTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79187 4 - 87586 CCTT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654549 4 + 85365473 CTTT i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144549480 4 - 189454096 CCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664490 4 + 39453387 CCTG i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283179 4 + 25348628 CCTT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284364 4 + 48547382 CCTT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 57706 4 + 294823 CCTT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4330430 4 + 12320365 CCGT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145793150 4 + 190850796 CCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14670576 4 + 15139346 CCTT i saiBol1.JH378162 I 2363 C 0 s cebCap1.NW_016107603v1 509012 4 + 3802414 CCTT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9873407 4 + 11631747 CCTT i aotNan1.NW_018493494v1 C 0 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e canFam3.chr13 21795057 3216 - 63241923 I e rheMac8.chrUn_NW_014841389v1 65543 531 + 80219 I a score=708907.000000 s hg38.chr9_KI270719v1_random 161659 90 + 176845 ATGAAAATAT---GGAATGTTGTGCACATTATTTCATAGACTTTGTG----CTT--AGTTAAAGGTCTTAA--------CCAAAAATTCTAAATGAtttctcctatt s panTro5.chr20 31540900 90 + 66533130 ATGAAAATAT---GGAATGTTGTGCCCATTATTTCATAAACTTTGTG----TTT--TGTTAAAGGTCTTAA--------TCAAAAATGCTAAATGAtttctcatatt i panTro5.chr20 C 0 C 0 s panPan2.chr4 294072 90 - 195804263 ATGAAAATAT---GGAATGTTGTGCCCATTATTTCATAAACTTTGTG----TTT--TGTTAAAGGTCTTAA--------TCAAAAATGCTAAATGAtttctcatatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79191 90 - 87586 ATGAAAATAT---GGAATGTTGTGCACATTATTTCATAGACTTTGTG----CTT--AGTTAAAGGTCTTAA--------CCAAAAATTCTAAATgatttctcctatt i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654553 82 + 85365473 ATGAAAATAT---GGAATGTTGTGCACA-TATTTCA------TTGTG----TTT---GTTAAAGGTCTTAA--------CCAAAAATTATAAATGATTTCTCATATT i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144549484 89 - 189454096 AAGAAAATAT---GGAATGTTGCacacactatttcatagactttgtg----ttt---gttaaaggtcttaa--------ccaaaaattataaatgattttccatatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664494 89 + 39453387 ATGAAAATAT---GGACTGTTGTGCACACTATTTCATAGACTTTGTG----TTT---GTTAAAGGTCTTAA--------CCAAAAATTATCAAAGAtttctcatatt i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283183 89 + 25348628 AAGAAAATAT---GGAATGTTGCACACACTATTTCATAGACTTTGTG----TTT---GTTAAAGGTCTTAA--------CCAAAAATTATAAATGAttttccatatt i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284368 89 + 48547382 AAGAAAATAT---GGAATGTTGCacacactatttcatagactttgtg----ttt---gttaaaggtcttaa--------ccaaaaattataaatgattttccttatt i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 57710 89 + 294823 AAGaaaatat---ggaatgttgcacacactatttcatagactttgtg----ttt---gttaaaggtcttaa--------ccaaaaattataaatgattttccatatt i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4330434 89 + 12320365 AAGaaaatat---ggaatgttgcacacactatttcacagactttgtg----ttt---gttaaaggtcttaa--------ccaaaaattataaatgattttccatatt i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145793154 94 + 190850796 ATGAAAATAT---GGAATGTTGTGCACACTGTTTCATAGACTTTGTGAAGACTT--TGTTAAAGATTATAA--------TCAAAAATTATAAATGAtttctcatatt i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14670580 98 + 15139346 ATGAAAATAT---GGAATGTTGTGCACACTGTTTCATAGACTTTGTG----TTT--TGTTAAAGATTATAAATGATTTGTTAAAAattataaatgatttttcatatt i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 509016 83 + 3802414 ATGAAAATAT---GGAATGTTGTGCATACTGTTTCATAGATTTTGTG-------------AAAGATCTTAA--------TCAAAAATTATAAATGAtttctcatatt i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9873411 90 + 11631747 ACGaaaatat---ggaatgttgtatacactgtttcatagactttgtg----ttt--tgttaaagatcttaa--------tcaaaaattataaatgatttctcatatt i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21798273 93 - 63241923 ATGAAAATACCAGATAATATTGTACATCCTATTTTCTAAGATTTTTG----TTTTCTGTTATGG--CTTCA--------CCAAAAATAATGGATGACttctcatatt i canFam3.chr13 I 3216 C 0 e nasLar1.chr5 135782239 2233 - 174288623 I e rheMac8.chrUn_NW_014841389v1 65543 531 + 80219 I a score=84755.000000 s hg38.chr9_KI270719v1_random 161749 12 + 176845 aataaatag-----ata s panTro5.chr20 31540990 12 + 66533130 aataaataa-----ata i panTro5.chr20 C 0 C 0 s panPan2.chr4 294162 12 - 195804263 aataaataa-----ata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79281 12 - 87586 aataaataa-----ata i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654635 8 + 85365473 AATAA---------ATA i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144549573 12 - 189454096 aataaataa-----ata i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664583 8 + 39453387 ----aataa-----atg i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283272 12 + 25348628 aacaagtaa-----ata i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284457 12 + 48547382 aataaataa-----ata i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 57799 12 + 294823 aacaaataa-----ata i manLeu1.NW_012101853v1 C 0 C 0 s nasLar1.chr5 135784472 12 - 174288623 aataaataa-----ata i nasLar1.chr5 I 2233 N 0 s colAng1.NW_012120821v1 4330523 12 + 12320365 aataaataa-----ata i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145793248 12 + 190850796 aataagcaa-----ata i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14670678 7 + 15139346 aat-----a-----ata i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 509099 12 + 3802414 aataagtaa-----ata i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9873501 12 + 11631747 agtaagtaa-----ata i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21798366 17 - 63241923 aataaataacattggta i canFam3.chr13 C 0 C 0 e rheMac8.chrUn_NW_014841389v1 65543 531 + 80219 I a score=2623128.000000 s hg38.chr9_KI270719v1_random 161761 316 + 176845 tcaa--taacatcattttaatgggctctatgaagaccttat--tgagtgattgtatcata----attcaacaagtgccctattgttgaacacttagattc----------tttctgattatttccctttac--aaaaaatgctatattgtaaattgttgtatgtaT-TTTTAAGTTATGAAATTGTTAGGGCAAAAG--GTGAATAAATGTAAGGTCTTTGATAAATA--GTCAGAATTCTCTCCATAGAGGATACGATAAAGCATCTTTTCATTTGAAGGAGCAAGAATAACTGCTAAATACTTCTGAGACTTCCAGTACTTTTTTG--GTTTTAAGTTTTG s panTro5.chr20 31541002 318 + 66533130 tcaa--taacatcattttaatgggctctataaagaacttat--tgtgtgattgtatcata----attcaacaagtgccctattgttgaacacttagactc----------tttctgattatttccctttac--aaaaaatgctatattatacattgttgtatgtat-ttttaagttatgaaattgttagggtacaag--gtgaataaatgtaaggtctttgataaatactgtcagaattctctccacagaggATACGATAAAGCATCTTTTCATTTGAAGGAGCAAGAATAACTGCTATATACTTCTGAGACTTCCAGTACTTTTTTG--GTTTTAAGTTTTG i panTro5.chr20 C 0 C 0 s panPan2.chr4 294174 318 - 195804263 tcaa--taacatcattttaatgggctctataaagaacttat--tgtgtgattgtatcata----attcaacaagtgccctatttttgaacacttagactc----------tttctgattatttccctttac--aaaaaatgctatattgtacattgttgtatgtat-ttttaagttatgaaattgttagggtacaag--gtgaataaatgtaaggtctttgataaatactgtcagaattctctccacagaggATACGATAAAGCATCTTTTCATTTGAAGGAGCAAGAATAACTGCTATATACTTCTGAGACTTCCAGTACttttttg--gttttaagttttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79293 318 - 87586 tcaa--taacatcattttaatgggctctatgaagaccttat--tgtgtgattgtatcata----attcagcaagtgccctattgttgaacacttagactc----------tttctgattatttccctttac--aaaaaatgctatattataaattgttgtatgtat-ttttaagttatgaacttgttagggcaaaag--gtgaataaatgtaaggtctttgataaatactgtcagaattctctccatagaggATACGATAAAGCATCTTTTCATTTGAAGGAGCAAGAATAACTGCTAAATACTTCTGAGACTTCCAGTACttttttg--gttttaagttttg i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654643 294 + 85365473 TCAA--TAACATCATTTTAAT-GGCTCTATAAAGGCCTTAT--T--GTGATTGTATCATA----ATTCAACAAGTGC------------CACTTAGACTC----------TTTC----TATTTCCGTTTAT-AAAAAAATGCTATATTATACATT-TTGTATATAT-TTTTAAGATTtgaaattgttagggcaaaagatgtgaataaatgta-------tgataaatactgtcagaattctctccatagaggATATGGTAAAGCATCTTTTCATTTGAAGGAAGAAGAATAACTGTTTTATACTTCTGAAATTTCCAGCACTTttttg--tttttaagttttg i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144549585 321 - 189454096 tcaa--taacatcatcttaat-ggctctataaagaccttat--tgtgtgattgtatcata----attcaacaagtgccctattgttgaacacttagactc----------tttctgattatatccctttacaaaaaaaatgctatattatacatttttgtatgtat-ttttaagatatgaaattgtcaagtccaaagatgtgaataaatgtagggtctttgataaatattgtcagagttctctccatagaggatatggcaaAGCATCTTTTCATTTGAAGGAACAAGAATAACTGCTATGTACTTCTGAGACTTCCAGCACTCttttg--tttttaagttttg i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664591 317 + 39453387 tcaa--taacatcatattaat-ggctctataaagaccttat--tgtgtgattgtatcata----attcaacaagtgccctattgttgaacacttagactc----------tttctgattattt--ctttac--aaaaaatgctatattatacatttttgtatatat-ttttaagatatgaaattgtcaagtccaaagatgtgaataaatgtagggtctttgataaatattgtcagagttctctccatagaggATATGGTAAAGCATCTTTTCATTTGAAGGAACAAGAATAACTGCTATGTACTTCTGAGACTTCCAGCACTCttttg--tttttaagttttg i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283284 321 + 25348628 tcaa--taacatcatcttaat-ggctctataaagaccttat--tgtgtgattgtatcata----attcaacaagtgccctattgttgaacacttagactc----------tttctgattatatccctttacaaaaaaaatgctatattatacatttttgtatatat-ttttaagatatgaaattgtcaagtccaaagacgtgaataaatgtagggtctttgataaatattgtcagagttctctccatagaggATATGGTAAAGCATCTTTTCATTTGAAGGAACAAGAATAACTGCTATGTACTTCTGAGACTTCCAGCACTCttttg--tttttaagttttg i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284469 321 + 48547382 tcaa--taacatcattttaat-ggctctataaagaccttat--tgtgtgattgtatcata----attcaacaagtgccctattgttgaacacttagactc----------tttctgattatttccctttacaaaaaaaatgctatattatacatttttgtatatat-ttttaagatatgaaattgtcaagtccaaagatgtgaataaatgtagggtctttgataaatattgtcagagttctctccatagaggATATGGTAAAGCATCTTTTCATTTGAAGGAACAAGAATAACTGCTATGTACTTCTGAGACTTCCAGCACTCttttg--tttttaagttttg i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 57811 321 + 294823 tcaa--taacatcatcttaat-agctctataaagaccttat--tgtgtgattgtatccta----attcaacaagtgccctattgttgaacacttagactc----------tttctgattatatccctttacaaaaaaaatgctatattatacatttttgtatatat-ttttaagatatgaaattgtcaagtccaaagatgtgaataaatgtagggtctttgataaatattgtcagagttctctccatagaggATATGGTAAAGCATCTTTTCATGTGAAGGAACAAGAATAACTGCTATGTACTTCTGAGACTTCCAGCACTCttttg--tttttaagttttg i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4330535 322 + 12320365 tcaa--taacatcattttaat-ggctctataaatacattat--tgtgtgattgtatcata----attcaccaagtgccctattgttgaacacttagactc----------tttctgattatttccctttacaaaaaaaatgctatattttacatttttgtatatatattttaagatatgaaattgtcaggtccaaagatgtgaataaatgtagggtctttgataaatattgtcagagttctctccatagaggATATGGTAAAGCATCTTTTCATTTGAAGGAACAAGAATAACTGCTATGTACTGCTGAGACTTCCAGCATTCttttg--tttttaagttttg i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145793260 322 + 190850796 tcaa--taacattattttaat-ggctctataaataccttat--tgtgtgattgcattataattcattcaacaagtggcccatttttgaacacttagactc----------tttctgattgttttcctttat-aaaaaaatgctatattatacgtttttgtatgtaT-TTTTAAGATATGAAATTGTTAGGCCAAAAGATGTGAATAAATGTGAGGTCTTTGGTAAGTACTGTCAGAATTCTCTTCATAGAGGATATGGTAAAGCATCTTTTTATTTGAAGGAACAAAAACAACTAGTATGTACTTCTGAGGCTTCCAGCACTTTATTG--TTCTTAAG--ATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14670685 327 + 15139346 tcaa--taacattgttttaat-ggctctataaatactttatagagtgtgattgtattataattcattcaacaagtgacctatttttgaacacttagactc----------tttctgattgttttcctttat--aaaaattgctatattatacatttttgtacatat-ttttaagatacgaaattgttaggccaaaagatgtgaataaatttaagttctttggtaagtactgtcagaattctctccatagaggATATGGTAAAGCATCTTTTCATTTGAAGGAACAGAAATAAATAATATGTACTTCTGAGGCTTCCAGCACTTTATTGTATTTTTAAGTTTTT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 509111 325 + 3802414 tcaa--taacattattttaat-ggctctataaataccttat--tgtgtgattgtattttaattcattcaacaagtcgtctatttttgaacacttatgctc----------tttctgattgttttcctttataaaaaaaatgctatattgtacatttttgtacgtat-ttttaagacatgaaattgttaggccaaaagatgtgaataaatgtaaggtctttggtaagtactgtcagaattctctccgtagaggATATGGTAAAGCATCTTTTCATTTGAAGGAAGAAAAGTAACTAGGATGTACTTCTGAGGCTTCTAGCACTTTATTG--TTTTTAAGTTTTT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9873513 321 + 11631747 tcaa--taacattattctaat-ggctctataaataccttat--tgtgtgattgcattataattcattcaacaagtggcctatttttgaacacttagactc----------tttc----tgttttcctttattaaaaaaatgctatattatacatttttgtatgtaT-TTTTAACATATGAAATTGTTAGGCCAAAAGATGTGAATAAATGTAAGGTCTTTGGTAAGTACTGTCAGAATTCTCTCCGTAGAGGATATAGTAAAGCATCTTTTCATTTCAAGGAACAAAAATAACTAGTATGTACTTCTGAGGCTTCCAGCACTTTATTG--TTTTTAAGTTTTT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21798383 286 - 63241923 ttaagtcatcatcattataat-ggctatct-aatactttat--tgcatgattctatcataattcattcaatgaatgccctattgtttaacatttagtctctgattttttttttctgattctttctttttac--aaaatatgctacattatacatggtcgtatatgt-gt--------------------------------------------ggtccttgGTAAATACTATCAGGATTCCCTCTAGAAACTATACAGCAAAACATCCTTGCATTTCAGGAAACAAGAACAATTTCCATA---TTCTGAGACTTCCTCCACTTTCTGG--TTTGCAGGATTT- i canFam3.chr13 C 0 C 0 e rheMac8.chrUn_NW_014841389v1 65543 531 + 80219 I a score=3942947.000000 s hg38.chr9_KI270719v1_random 162077 373 + 176845 TTGTTGTTTATTTGG-TTTTTTGGAGGTT-TTCTGTTTTGTTTTATAAGTAGGTTT--CAGTATTGCTAAGTATTCAGTCATGGTGGATATTCGAAGAATAATTTCTCTCTTTGGGATTATTCCTCTAACA-CTATGAGCAAGTATCACTGTGTTCTTTCTCTAAAGGAAAATATAAAGCATAGACAAATTAAATGCTGCTCAGATTCTAAAACTATGAAAATATAACAATGGAG-AAACAAATAGCAAGTCTGT-AGCTACTCAATGACTTTAGCATTGAGTGGATCCTAAAATGCCTA-TTTTGCACAGAATG-AAAAAGATACAGCAGGTTCCTTTGGAAGATCAAAGTGAGAAAATTGACTACAGCTTTAACagcctt s panTro5.chr20 31541320 375 + 66533130 TTGTTGTTTATTTGG-TTTTTTGGAGGTT-TTCTGTTTTGTTTTATAAGTAGGTTT--CAGTATTACTTAGTATTCAGTCATGGTGGATATTTGAAGAATAATTTCTCTCTTTGGGATTATTCCTCTAACA-CTACGAGCAAGTATCACTGTGTTCTTTCTCTAAAGGAAAATATAAAGCATAGACAAGTTAAATGCTGCTCAGATTCTAAAACTATGAAAATATAACAATGCAGAAAACAAATAGAAAGTCTCT-AGCTACTCAATGACTTTAGCATTGAGTGGATCCTAAAATGCCTATTTTTGCACAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAAGATCAAAGTGAGAAAATTGACTACAGCTTTAACAGCCTT i panTro5.chr20 C 0 C 0 s panPan2.chr4 294492 375 - 195804263 ttgttgtttatttgg-ttttttggaggtt-ttctgttttgttttATAAGTAGGTTT--CAGTATTACTTAGTATTCAGTCATGGTGGATATTTGAAGAATAATTTCTCTCTTTGGGATTATTCCTCTAACA-CTACGAGCAAGTATCACTGTGTTCTTTCTCTAAAGGAAAATATAAAGCATAGACAAGTTAAATGCTGCTCAGATTCTAAAACTATGAAAATATAACAATGCAGAAAACAAATAGAAAGTCACT-AGCTACTCAATGACTTTAGCATTGAGTGGATCCTAAAATGCCTATTTTTGCACAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAAGATCAAAGTGAGAAAATTGACTACAGCTTTAACAGCCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79611 373 - 87586 ttgttgtttatttgg-ttttttggaggtt-ttctgttttgttttATAAGTAGGTTT--CAGTATTACTAAGTATTCAGTCATGGTGGATATTCGAAGAATAATTTCTCTCTTTGGGATTATTCCTCTAACA-CTATGAGCAAGTATCACTGTGTTCTTTCTCTAAAGGAAAATATAAAGCATAGACAAATTAAATGCTGCTCAGATTCTAAAACTATGAAAATATAACAATGGAG-AAACAAATAGCAAGTCTGT-AGCTACTCAATGACTTTAGCATTGAGTGGATCCTAAAATGCCTATTTTTGCACAGAATG-AAAAAGATACAGCAGGTTCCTTTGGAAGATCAAAGTGAGAAAATTGACTACAGCTTTAACAG-CTT i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42654937 375 + 85365473 ttgttatttatttcg--tttctggaggtt-ttctgttttgttttATAAGTAGATTT--CAGTATTACTTGGTATTCAGTCATAGTGGATATTTGAAGAATAATTTCTCTTTTTGGGATTATTCCTCTAACACCTACAAACAAGTATCACTGTGTTCTTTCTCTAAAGGAAAATAAAAAGCATAGACAAATTAAATGCTGCTCAGATTCTAAATCTATGAAAATATAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGACTTTAGCACTGAGTGAATCCTGGCATGCCTATTTTTGCATAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAACATCAAACTGAGAAAATTGACTGCAGCTTTAACAACCTT i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 66074 376 + 80219 ttgttgtttatttggtttttttggaggtt-ttctgttttgttttATAAGTAGGTTT--CAGTATTACTTAGTGAT-AGTCATGGTGGATATTTGAAGAATAATTTCTCTCTTTCGGATTATTCCTCTAACA-CTACAAGCAAGTATCACTGTGTTCTTTCTCTAAAGGAAAATATAAAGCATAGACAAATTAAATGCTGCTCAGATTCTAAAACTTTGAAAATACAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGACTTGAGCATTGAGTGAATCCTAGCATGCCTATTTTTGCATAGAATGAAAAAAGACACAGCAGGTTCCTTTGGAACAACAAAGTAAGAACATTGACTACAGCTTTAACACCCTT i rheMac8.chrUn_NW_014841389v1 I 531 I 4994 s macFas5.chr5 144549906 371 - 189454096 ----tggttatttgg--tttttggaggtt-ttctgttttgttttCTAAGCAGGTTT--CAGTATTACTTAGTATTCAGTCATGGTGGACGTTTGAAGAAAAATTTCTTTCTTTGGGATTATTCCTCTAACACCTACAAACAAGTATCACTGTGTTCTTTCTCTAAAGGAAAACATAAAGCATAGACAAATTAAATGCTGCTCAGATTCTAAAACTATGAAAATACAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGATTTTAGCATTCAGTGGATCCTAGCACGCTTATTTTTGCATAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAACATCAAACTGAGAAAATTGACTACAGCTTTAACAGCCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012011022v1 3664908 371 + 39453387 ----tggttatttgg--tttttggaggtt-ttctgttttgttttCTAAGCAGGTTT--CAGTATTACTTAGTATTCAGTCATGGTGGACGTTTAAAGAAAAATTTCTCTCTTTGGGATTATTCCTCTAACACCTACAAACAAGTATCACTGTGTTCTTTCTCTAAAGGAAAACATAAAGCATAGACAAATTAAATGCTGCTCAGATTCTAAAACTATGAAAATACAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGATTTTAGCATTCAGTGGATCCTAGCACGCTTATTTTTGCATAGAATG-AAAAAGACACAGCAGGTTCCTTTGAAACATCAAAGTGAGAAAATTGACTACAGCTTTAACAGCCTT i macNem1.NW_012011022v1 C 0 C 0 s cerAty1.NW_012002843v1 1283605 371 + 25348628 ----ttgttatttgg--tttttggaggtt-ttctgttttgttttCTAAGCAGGTTT--CAGTATTACTTAGTATTCAGTCATGGTGGACGTTTGAAGAAAAATTTCTCTCTTTGGGATTATTCCTCTAACACCTACAAACAAGTATCACTGTGTTCTTTCTCTAAAGGAAAACATAAAGCATAGACAAATTAAATGCTGCTCAGATTCTAAAACTATGAAAATACAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGATTTTAGCATTCAGTGGATCCTAGCACGCTTATTTTTGCATAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAACATCAAACTGAGAAAATTGACTACAGCTTTAACAGCCTT i cerAty1.NW_012002843v1 C 0 C 0 s chlSab2.chr27 5284790 371 + 48547382 ----ttgttatttgg--tttttggaggtt-ttctgttttgttttCTAAGTAGGTTT--CAGTATTACTTAGTATTCAGTCATGGTGGATGTTTGAAGAAAAATTTCTCTCTTTGGGATTATTCCTCTAACACCTACAAACAAGAATCACTGTGTTCTTTCTCTAAAGGAAAACATAAAGCATAGACAAATTAAATGTTGCTCAGATTCTAAAACTATGAAAATCCAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGATTTTAGCATTCAGTGGATCCTAGCACGCTTATTTTTGCATAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAACATCAAACTGAGAAAATTGACTACAGCTTTAACAGCCTT i chlSab2.chr27 C 0 C 0 s manLeu1.NW_012101853v1 58132 371 + 294823 ----ttgttatttgg--tttttggaggtt-ttctgttttgttttCTAAGCAGGTTT--CTGTATTACTTAGTATTCAGTCATGGTGGACATTTGAAGAAAAATTTCTCTCTTTGGGATTATTCCTCTAACACCTACAAACAAGTATCACCGTGTTCTTTCTCTAAAGGAAAACATAAAGCATAGACAAATTAAATGCTGCTCAGATTCTAAAACTATGAAAATACAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGATTTTAGCATTCAGTGGATCCTAGCATGCTTATTTTTGCATAGAGTG-AAAAAGACACAGCAGGTTCCTTTGGAACATCAAACTGAGAAAATTGACTACAGCTTTAACAGCCTT i manLeu1.NW_012101853v1 C 0 C 0 s colAng1.NW_012120821v1 4330857 371 + 12320365 ----tggttatttgg--tttttggaggtt-ttctgttttgttttATAAGTAGGTTT--CAGTATTACTTAGTATTCAGTCATGGTGGATGTTTGAAGAAAACTTTTTCTCTTTGGGATTATTCCTCTAACACCTACAAACAAGTATCACTGTGTTCTTTCCCTAAAGGAAAACATAAAGCATAGACAAATTAAATGCTGCTCAGATTCTAAAACTATGAAAATACAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGATTTTAGCCTTGAGTAGATCCTAGCATGCCTATTTTTGCATAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAACATTAAACTGAGAAAATTGACTACAGCTTTAACGGCCTT i colAng1.NW_012120821v1 C 0 C 0 s calJac3.chr3 145793582 376 + 190850796 TTGTTGTTCATTTAG-TTTTTTGGAGGTT-TTCTGTTTTGTTTTATAAGCAGGTTT--CAGTATTACTTAGTATTCAGTCATGGTGAATACTTGAAGAATAATTTCTCTCTTCGGGATTATTCCTCTAACACCTACAAACAAATATCGTGGTGTTCTTTCTTTAAAGGGAAATATAAAGCATAGAAAAATTAAACGCTGCTGAAATTCTAAAACTATGAAAATATAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGACTTTAGCATTGAGTGGACCCTAGCATGCCTATTTTTGCCTAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAACATCAAACTTAGAAAATTGACTACAGCTTTCACAGCCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378162 14671012 377 + 15139346 TTGTTTATTATTTAGTTTTTTTGGAGCTT-TTCTGTTTTGTTTTATAAGCAGGTTT--CAGTATTACTTTGTATTCAGTCATCGTGGATACTTGAAGAATAATTTCTCTCTTCGGGGTTATTCCTCTAACACCTACAAACAAATATCATGGTGTTCTTTCTTTAAAGGAAAATATAAAGCATAGAAAAAATAAACACTTCTCGAATTCTAAAACTATGAAAATATAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGACTTTAGCACTGAGTGGATCCTAGCATGCCTATTTTTTCCTAGAATG-TAAAAGACACAGCAGGCTCCTTTGGAACATCAAACTTAGAAAATTGACTACAGCTTTAACAACCTT i saiBol1.JH378162 C 0 C 0 s cebCap1.NW_016107603v1 509436 376 + 3802414 TTGTTGTTGATTTAG-TTTTTTGGAGGTT-TTCTGTTTTGTTTTATAAGCAGATTT--CAGTATTACCTAGTATTAAGTCATGGTGGATACTTCAAGAATAATTTCTCTCTTCGGGATTATTCCTCTAACACCTACAAACAAATATCATGGTGTTCTTTCTTTAAAGGAAAATATAAAGCATAGAAAAAATAAACACTGCTTAAATTCTAAAATTATAAAAATATAACAATGGAGAAAACAAATAGAAAGTTTGT-AGCTACTCAATGACTTTAGCACTGAGTGGATCCTAGCATGCCTATATTTGCCTAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAACATCAAACTTAGAAAATTGACTACAGCTTTAACAGCCTT i cebCap1.NW_016107603v1 C 0 C 0 s aotNan1.NW_018493494v1 9873834 375 + 11631747 TTGTTGTTTATTTAG-TTTTTTGAAGGTT-TTCTGTTTTGTTTTATAAGCAGGTTT--CAGTATTATTTAGTATTCAGTCATGGTGGATACTTGAAGAATAATTTCTCTCTTTGGGATTATTCCTCTAACACCTACAAGCAAATATCATGGTGTTCTTTCTTTAAAGGAAAATATAAAGCATAGAAAAA-TAAACACTGCTCAAATTCTAAAACTATGAAAATATAACAATGGAAAAAACAAATAGAAAGTTTGT-AGCTACTCGATGACTTTAGTGTTGAGTGGATCCTAGCATGCCTATTTTTGCCTAGAATG-AAAAAGACACAGCAGGTTCCTCTGGAACACCAAACTTAGAAAATTGACTACAGCTTTAACAGCCTT i aotNan1.NW_018493494v1 C 0 C 0 s canFam3.chr13 21798669 377 - 63241923 TTGTTGTTTGGTTGG----TATGGGGTTTGTTTTTTTTTATTTTTTAAGTAGGTTTTGCAGCATTATTTAGTATTCAGTGGTCATGGATATTTGAAGAATAATTTCTCTCTTTGAAAGTATTCCTCCAACATCTACAAACAAATACCAGCGTGTTCTCTCTCTGAAGGAAAACACAAAGCAGAAAGGAATTAAATGCTGCACAAATTCCGAAACTATGGAAATGTAACAATAGAGAAAACAAGTAGAAAGTTTTTAAGCCATCCGATGACTTTAGCAGCTGGTAGATCCAACCATGCCTATTTTTGCACAGAATG-AAAAAGACACAGCAGGTTCCTTTGGAACATCAAACTGAGAAAATTGACTACAGCTTTAACAGCCTT i canFam3.chr13 C 0 C 0 a score=40605.000000 s hg38.chr9_KI270719v1_random 162450 4 + 176845 aaaa s panTro5.chr20 31541695 4 + 66533130 AAAA i panTro5.chr20 C 0 C 0 s panPan2.chr4 294867 4 - 195804263 AAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 79984 4 - 87586 AAAA i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42655312 4 + 85365473 AAAA i nomLeu3.chr20 C 0 C 0 s macFas5.chr5 144550277 4 - 189454096 AAAA i macFas5.chr5 C 0 I 1 s macNem1.NW_012011022v1 3665279 4 + 39453387 AAAA i macNem1.NW_012011022v1 C 0 I 1 s cerAty1.NW_012002843v1 1283976 4 + 25348628 AAAA i cerAty1.NW_012002843v1 C 0 I 1 s chlSab2.chr27 5285161 4 + 48547382 AAAA i chlSab2.chr27 C 0 I 1 s manLeu1.NW_012101853v1 58503 4 + 294823 AAAA i manLeu1.NW_012101853v1 C 0 I 1 s colAng1.NW_012120821v1 4331228 4 + 12320365 AAAA i colAng1.NW_012120821v1 C 0 N 0 s calJac3.chr3 145793958 4 + 190850796 AAAA i calJac3.chr3 C 0 I 1 s saiBol1.JH378162 14671389 4 + 15139346 ACAA i saiBol1.JH378162 C 0 I 1 s cebCap1.NW_016107603v1 509812 4 + 3802414 AAAA i cebCap1.NW_016107603v1 C 0 N 0 s aotNan1.NW_018493494v1 9874209 4 + 11631747 AAAA i aotNan1.NW_018493494v1 C 0 N 0 s canFam3.chr13 21799046 4 - 63241923 AAAA i canFam3.chr13 C 0 C 0 e rheMac8.chrUn_NW_014841389v1 66450 4994 + 80219 I a score=-2210.000000 s hg38.chr9_KI270719v1_random 162454 1 + 176845 -t s panTro5.chr20 31541699 1 + 66533130 -T i panTro5.chr20 C 0 I 4821 s panPan2.chr4 294871 1 - 195804263 -T i panPan2.chr4 C 0 I 64320 s gorGor5.CYUI01000881v1 79988 1 - 87586 -T i gorGor5.CYUI01000881v1 C 0 I 4678 s nomLeu3.chr20 42655316 1 + 85365473 -G i nomLeu3.chr20 C 0 C 0 s canFam3.chr13 21799050 1 - 63241923 G- i canFam3.chr13 C 0 C 0 e saiBol1.JH378162 14671393 1 + 15139346 I e calJac3.chr3 145793962 1 + 190850796 I e manLeu1.NW_012101853v1 58507 1 + 294823 I e chlSab2.chr27 5285165 1 + 48547382 I e cerAty1.NW_012002843v1 1283980 1 + 25348628 I e macNem1.NW_012011022v1 3665283 1 + 39453387 I e macFas5.chr5 144550281 1 - 189454096 I e rheMac8.chrUn_NW_014841389v1 66450 4994 + 80219 I a score=16562.000000 s hg38.chr9_KI270719v1_random 162455 2 + 176845 aa s panTro5.chr20 31546521 2 + 66533130 aa i panTro5.chr20 I 4821 C 0 s panPan2.chr4 359192 2 - 195804263 aa i panPan2.chr4 I 64320 C 0 s gorGor5.CYUI01000881v1 84667 2 - 87586 aa i gorGor5.CYUI01000881v1 I 4678 C 0 s nomLeu3.chr20 42655317 2 + 85365473 AA i nomLeu3.chr20 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71444 2 + 80219 aa i rheMac8.chrUn_NW_014841389v1 I 4994 C 0 s macFas5.chr5 144550282 2 - 189454096 AA i macFas5.chr5 I 1 C 0 s macNem1.NW_012011022v1 3665284 2 + 39453387 AA i macNem1.NW_012011022v1 I 1 C 0 s cerAty1.NW_012002843v1 1283981 2 + 25348628 AA i cerAty1.NW_012002843v1 I 1 C 0 s chlSab2.chr27 5285166 2 + 48547382 AA i chlSab2.chr27 I 1 C 0 s manLeu1.NW_012101853v1 58508 2 + 294823 AA i manLeu1.NW_012101853v1 I 1 C 0 s calJac3.chr3 145793963 2 + 190850796 AA i calJac3.chr3 I 1 N 0 s saiBol1.JH378162 14671394 2 + 15139346 AA i saiBol1.JH378162 I 1 N 0 s canFam3.chr13 21799051 2 - 63241923 AA i canFam3.chr13 C 0 N 0 a score=10010.000000 s hg38.chr9_KI270719v1_random 162457 2 + 176845 at s panTro5.chr20 31546523 2 + 66533130 at i panTro5.chr20 C 0 C 0 s panPan2.chr4 359194 2 - 195804263 at i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 84669 2 - 87586 at i gorGor5.CYUI01000881v1 C 0 C 0 s nomLeu3.chr20 42655319 2 + 85365473 AT i nomLeu3.chr20 C 0 N 0 s rheMac8.chrUn_NW_014841389v1 71446 2 + 80219 at i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s macFas5.chr5 144550284 2 - 189454096 AT i macFas5.chr5 C 0 N 0 s macNem1.NW_012011022v1 3665286 2 + 39453387 AT i macNem1.NW_012011022v1 C 0 N 0 s cerAty1.NW_012002843v1 1283983 2 + 25348628 AT i cerAty1.NW_012002843v1 C 0 N 0 s chlSab2.chr27 5285168 2 + 48547382 AT i chlSab2.chr27 C 0 N 0 s manLeu1.NW_012101853v1 58510 2 + 294823 AT i manLeu1.NW_012101853v1 C 0 N 0 a score=92448.000000 s hg38.chr9_KI270719v1_random 162459 104 + 176845 acctaatgtaaatgacaagttaatgggtgcagcaaaccaacacagcacatgtatacatatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaag s panTro5.chr20 31546525 104 + 66533130 acctaatgtaaatgacaagttaatgggtgcagcaaaccaacacagcacatgtatacatatgtaacaaacctgcacgttgtgcacctgtaccctagaacttaaag i panTro5.chr20 C 0 C 0 s panPan2.chr4 359196 104 - 195804263 acctaatgtaaatgacaagttaatgggtgcagcaaaccaacacagcacatgtatacatatgtaacaaacctgcacgttgtgcacctgtaccctagaacttaaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 84671 104 - 87586 acctaatgtaaatgacaagttaatgggtgcagcaaaccaacacagcacatgtacacatatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaag i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71448 104 + 80219 acttaatgtaaatgatgagttaatgggtgcagcaaaccaacagggcacatgtaaacatatgtaacaaacctgcatgttgtgcacatgtaccctagaacttaaag i rheMac8.chrUn_NW_014841389v1 C 0 C 0 a score=159385.000000 s hg38.chr9_KI270719v1_random 162563 195 + 176845 tataataaaaataaataaaTACATAaa----ataaaatgaataaaaaataaatacaaacatattaatcataagtaaatGaaacatctgataa--------tctcattatgtctggtagtaatgtcacctctgagtatttaaatattcatctacatatttctttgctaaatttccttttatttctcctttatattaAACTTTTTTTTA s panTro5.chr20 31546629 199 + 66533130 tataataaaaataaataaatacataaataaaataaaataaataaaaaataaataCAAACATATTAATCATAAATAAATGAAATATCTGATAA--------CCTCATTACGTCTGGTAGTAATGTCACCTCTGAGTATTTAAATATTCATCTATATATTCCTTTGCTAAATTTCCTTTAATTTCTCTTTTATATTAAACTTTTTTTTA i panTro5.chr20 C 0 C 0 s panPan2.chr4 359300 198 - 195804263 tataataaaaataaataaatacataaataaaataaaataaataaaaaataaataCAAACATATTAATCATAAataaatgaaatatctgataa--------cctcattatgtctggtagtaatgtcacctctgagtatttaaatatttatctatatattcctttgctaaatttcctttaatttctcttttatattaAAC-TTTTTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 84775 199 - 87586 tataataaaaataaataaaTACATaaataaaataaaatgaataaaaaataaatacaaacatattaatcataagtaaatGaaacatctgataa--------tctcattatgtctggtagtaatgtcacctctgagtatttaaatattcatctacatatttctttgctaaatttccttttatttctcctttatattaAACTTTTTTTTA i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71552 192 + 80219 tataataa----aaataaaTACATAAATAAAATTAAAT---TAAAAGGTAAATGCAAACATATTAATCATAAGTAAATGaaatatctgatga--------tctcattatgtctggtagtaatgtcatctctgagtacttaaatattcatctatatattcctttgctaaatttccctttatttctcttttatattaAACTTTTTTTTA i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s tarSyr2.KE939465v1 143676 141 + 305518 tgtgagaaaAATAAGTAAATACATAAAATATATATATTTATTTAGTAATTAGTTCA---GTACT--TGGTAAGAAAACAAAGTACTCCACGAATATCGGGCCTTATTGTTCTTAGTGGTGGGGACAT-----------------------------------------ATTTCCTCTCTTTTCTTTT-------------------- i tarSyr2.KE939465v1 N 0 N 0 a score=80533.000000 s hg38.chr9_KI270719v1_random 162758 93 + 176845 GAGAGCACAACTCCAAAGCATCTTTTATTAATATAGAAAGGTCATATTTAGCAAAAGACACAAGGCAGGGAAGTGTCAGGCCTGAGGCCTGAG s panTro5.chr20 31546828 93 + 66533130 GAGAGCACAAATCCAAAGCATCTTTTATGAATATAGATAGGTCATGTTTAGCAAAAGACACAAGGCAGGGAAGTGTCAGGCCTGAGGCCTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 359498 93 - 195804263 GAGAGCACAAATCCAAAGCATCTTTTATGAATATAGATAGGTCATGTTTAGCAAAAGACACAAGGCAGGGAAGTGTCAGGCCTGAGGCCTGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 84974 93 - 87586 GAGAGCACAACTCCAAAGCATCTTTTATTAATATAGAAAGGTCATATTTAGCAAAAGACACAAGGCAGGGAAGTGTCAGGCCTGAGGCCTGAG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71744 93 + 80219 GAGAGCGCAACTCCAAATCATCTTTTATTAATGGAGAAAGGTCATATTTAGCAAAAGACACAAGGCAGGGAAGTGTCAGACCTGAGGCCTGAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 a score=1500.000000 s hg38.chr9_KI270719v1_random 162851 1 + 176845 C s panTro5.chr20 31546921 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr4 359591 1 - 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 85067 1 - 87586 C i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71837 1 + 80219 C i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s rhiRox1.KN297886v1 24764 1 - 25466 C i rhiRox1.KN297886v1 N 0 I 30 a score=23987.000000 s hg38.chr9_KI270719v1_random 162852 28 + 176845 -TGTGCTGAGGGACAAGGAGGCTCCGGAC s panTro5.chr20 31546922 28 + 66533130 -CGTGCTGAGGGAGAAGGAGGCTCCGGAC i panTro5.chr20 C 0 C 0 s panPan2.chr4 359592 28 - 195804263 -CGTGCTGAGGGAGAAGGAGGCTCCGGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 85068 28 - 87586 -TGTGCTGAGGGAGAAGGAGGCTCCGGAC i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71838 29 + 80219 CCGTGCTGAGGGAGAAGGAGGCTCGGGGC i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e rhiRox1.KN297886v1 24765 30 - 25466 I a score=1365.000000 s hg38.chr9_KI270719v1_random 162880 1 + 176845 A s panTro5.chr20 31546950 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr4 359620 1 - 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 85096 1 - 87586 A i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71867 1 + 80219 A i rheMac8.chrUn_NW_014841389v1 C 0 I 9 s rhiRox1.KN297886v1 24795 1 - 25466 A i rhiRox1.KN297886v1 I 30 I 136 a score=25582.000000 s hg38.chr9_KI270719v1_random 162881 33 + 176845 AGTG---------CTGGGAAGGGCTGAGTGGTGGGGGCCACA s panTro5.chr20 31546951 42 + 66533130 AGTGGGAGAAGTGCTGGGAAGGGCCGAGTGGTGGGGGCCGCA i panTro5.chr20 C 0 C 0 s panPan2.chr4 359621 42 - 195804263 AGTGGGAGAAGTGCTGGGAAGGGCCGAGTGGTGGGGGCCGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 85097 32 - 87586 AGTG----------TGGAAAGGGCTGAGTGGTGGGGGCCACA i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71877 33 + 80219 AGTG---------CTGGGAAGGGCTGAGTGGTGGGGGCCGCA i rheMac8.chrUn_NW_014841389v1 I 9 C 0 e rhiRox1.KN297886v1 24796 136 - 25466 I a score=1500.000000 s hg38.chr9_KI270719v1_random 162914 1 + 176845 G s panTro5.chr20 31546993 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr4 359663 1 - 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 85129 1 - 87586 G i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71910 1 + 80219 G i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s rhiBie1.NW_016818573v1 1874298 1 + 2491303 G i rhiBie1.NW_016818573v1 N 0 I 105 e rhiRox1.KN297886v1 24796 136 - 25466 I a score=86203.000000 s hg38.chr9_KI270719v1_random 162915 94 + 176845 AAAGTTCCAGTGGGCAACACTGTCGGCAGGTCATGGGTGGGACTCACGGGGACCTCGTTGCTAACTCTTGTTGCGTTGGCGGGGTGGGGTGGGG s panTro5.chr20 31546994 94 + 66533130 AAAGTTCCAGTGGGCAACACTGTCGGCAGGTCATGGGTGGGACTCACGGGGACCTTGCTGCTAACTCTTGTTGCGTTGGCGGGGTGGGGTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr4 359664 94 - 195804263 AAAGTTCCAGTGGGCAACACTGTCGGCAGGTCATGGGTGGGACTCACGGGGACCTTGCTGCTAACTCTTGTTGCGTTGGCGGGGTGGGGTGGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 85130 94 - 87586 AAAGTTCCAGTGGGCAACACTGTCGGCAGGTCATGGGTGGGACTCACGGGGACCTCGCTGCTAACTCTTGTTGCGTTGGCGGGGTGGGATGGGG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 71911 94 + 80219 AAAGTTCCAGTGGGCAACACTGTGGGCAGGTCATGGGTGGGACTCACGGGGACCTCGCTGCTAACTCTTGTTGCTTTGGCAGAGTGGGGTGGGG i rheMac8.chrUn_NW_014841389v1 C 0 I 3 e rhiBie1.NW_016818573v1 1874299 105 + 2491303 I e rhiRox1.KN297886v1 24796 136 - 25466 I a score=4605.000000 s hg38.chr9_KI270719v1_random 163009 4 + 176845 AGGG s panTro5.chr20 31547088 4 + 66533130 AGGG i panTro5.chr20 C 0 I 1 s panPan2.chr4 359758 4 - 195804263 AGGG i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01000881v1 85224 4 - 87586 AGGG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72008 4 + 80219 AGGG i rheMac8.chrUn_NW_014841389v1 I 3 C 0 s rhiRox1.KN297886v1 24932 3 - 25466 -GGA i rhiRox1.KN297886v1 I 136 I 138 e rhiBie1.NW_016818573v1 1874299 105 + 2491303 I a score=22646.000000 s hg38.chr9_KI270719v1_random 163013 25 + 176845 -GGGTCCTTAGTGCTGCCACCTGGAG s panTro5.chr20 31547093 25 + 66533130 -GGGTCCTTAGTGCTGCCACCTGGAG i panTro5.chr20 I 1 C 0 s panPan2.chr4 359763 25 - 195804263 -GGGTCCTTAGTGCTGCCACCTGGAG i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01000881v1 85228 25 - 87586 -GGGTCCTTAGTGCTGCCACCTGGAG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72012 26 + 80219 AGGATCGTTAGTGCTGCCACCTGGAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e rhiBie1.NW_016818573v1 1874299 105 + 2491303 I e rhiRox1.KN297886v1 24935 138 - 25466 I a score=5730.000000 s hg38.chr9_KI270719v1_random 163038 4 + 176845 TGAG s panTro5.chr20 31547118 4 + 66533130 TGAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 359788 4 - 195804263 TGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 85253 4 - 87586 TGAG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72038 4 + 80219 TGAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s rhiBie1.NW_016818573v1 1874404 4 + 2491303 TGAG i rhiBie1.NW_016818573v1 I 105 N 0 e rhiRox1.KN297886v1 24935 138 - 25466 I a score=89808.000000 s hg38.chr9_KI270719v1_random 163042 106 + 176845 AACCGCCCCTTGGTTCCTGGAGGGCACCCATCAAGGGACACAGGATAGGAAGCCCAGGATGGTTAGTGCAACTAGGGATGAAGGCCAGGGAGAAGCAGGTGCTCTG s panTro5.chr20 31547122 106 + 66533130 AAAAGCCCGTTGGTTCCTGGAGGGCACCCATCAAGGGACACAGGACAGGAAGCCCAGGATGGTTAGTGCAACTAGGGATGAAGGCCAGGGAGAAGCAGGTGCTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr4 359792 106 - 195804263 AAAAGCCCCTTGGTTCCTGGAGGGCACCCATCAAGGGACACAGGACAGGAAGCCCAGGATGGTTAGTGCAACTAGGGATGAAGGCCAGGGAGAAGCAGGTGCTCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 85257 105 - 87586 AACCGCCCCTTGGTTCCTGGAGGGCACCCATCAAGGGACACAGGACAGGAAG-CCAGGATGGTTAGTGCAACTAGGGATGAAGGCCAGGGAGAAGCAGGTGCTCTG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72042 104 + 80219 AGCCGCCCCTTGGTTCCT-GAGGGCA-CCATCAAGGGACACAGGACAGGAAGCCCAGGATGGTTAGTGCAGCTAGGGATGAGGGCCAGGGAGAAGCAGGTGCCCTG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e rhiRox1.KN297886v1 24935 138 - 25466 I a score=9779.000000 s hg38.chr9_KI270719v1_random 163148 4 + 176845 GAGT s panTro5.chr20 31547228 4 + 66533130 GAGT i panTro5.chr20 C 0 C 0 s panPan2.chr4 359898 4 - 195804263 GAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 85362 4 - 87586 AAGT i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72146 4 + 80219 GAGT i rheMac8.chrUn_NW_014841389v1 C 0 I 13 s papAnu3.chr5 149369063 4 + 178775436 GAGT i papAnu3.chr5 N 0 N 0 s nasLar1.chr10 53738363 4 + 86128551 GAGT i nasLar1.chr10 N 0 N 0 s rhiRox1.KN297886v1 25073 4 - 25466 GAGT i rhiRox1.KN297886v1 I 138 N 0 a score=97710.000000 s hg38.chr9_KI270719v1_random 163152 116 + 176845 CCAGACACAGAGGCCTAGGAACTTCCTGTTAAGTGTGGGCGTTCCGCTCTGTCTCTACCAGGCACTCTGACTAGGGATGGATGATACCTCTCTTCAGGCGCTCCGCAGCGCTCTTG s panTro5.chr20 31547232 116 + 66533130 CCAGGCACAGAGGCCTAGGAGTTTCCTGTTAAGTGCCGGCGTTCCGCTCTGTCTCTGCCAGGCATTCTGACTAGGGATGGATGATACCTCTCTTCAGGCGCTCCGTGGCGCTCTTG i panTro5.chr20 C 0 C 0 s panPan2.chr4 359902 116 - 195804263 CCAGGCACAGAGGCCTAGGAGTTTCCTGTTAAGTGCCGGCGTTCCGCTCTGTCTCTGCCAGGCATTCTGACTAGGGATGGATGATACCTCTCTTCAGGCGCTCCGTGGCGCTCTTG i panPan2.chr4 C 0 M 261 s gorGor5.CYUI01000881v1 85366 116 - 87586 CCAGACACAGAGGCCTAGGAGCTTCCTGTTAAGTGTGGGCGTTCCGCTCTGTCTCTACCAGGCACTCTGACTAGGGATGGATGATACCTCTCTTCAGGCGCTCCGCGGCGCTCTTG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72163 116 + 80219 CCAGACACGGAGGCTTAGGAGCTTCCTGTTAAGTGCGTGGGTTCCGCCCTGTCTCTGCCAGGCACTCTGACTAGGGATGGATGATCTCCCTCTTCAGGTGCTCCGTGGTGGTCTTG i rheMac8.chrUn_NW_014841389v1 I 13 C 0 a score=23142.000000 s hg38.chr9_KI270719v1_random 163268 45 + 176845 CTGCCAGCATAGGTGGGCCGGATCACTTTGCCCATCTCCCCTGTG s panTro5.chr20 31547348 45 + 66533130 CTGCTAGCATAGGTGGGCCGGATCCCTTTGCCCATCTCCCCTGTG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01000881v1 85482 45 - 87586 CTGCCAGCATAGGTGGGCCGGATCCCTTTGCCCATCTCCCCTGTG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72279 45 + 80219 CTCCCAGCAAAGGTGGTCCGGATCCCTTTGCCCATCTCCCCTGTG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 e panPan2.chr4 360018 261 - 195804263 M a score=534517.000000 s hg38.chr9_KI270719v1_random 163313 645 + 176845 ACCAACAGCAGTTCCGTGTAGGTACTCTGGGAGCCCTGGGCACCAGGTGGTTTCATGGCCTGCACACAACCGATGGTAGGCGGTCCAAAGTCTTTAAACAGCGGTCTGAAAGGGGCAGTGGCTCCCGGCCCTGAGCCCGACGGTGACGGGACGCTTCCTGTAGGGACCAGAGTGCCTGGCCCAGGGGTGCTGGAGCCGGGGGTGCTGCTGGGGGCAGGTGTGGTAGGTTTGTAGGACATCCCCAACTCCTGGGCACTGGGGAAGCCAGCAGGCTGCTCTTCGGGGGTTGGCTGCGGGACCGCTCAGCAGCGATCTGATTGGCAAGTGGGCTGCACA--CCCCCTGGTAAATCTATATTAAactttttaactgcaatttgtattaatctaaatacagttcaaatattctccatgaaaatttcacatttg----agttgagacatcctaaaatttaaaatacacaatggatttcaaagatttcatatgaaaaaagaacgcaaactatctctaataatttttatattgattacatattgacccaatattttgtatatatattgggttaaataaaatatacaa------tttaaaaaaa--ttaTGCTACATTTTTGTTAAAAAATTTAAATAAACTATATATGAAATTATTTCTTGGGATAG s panTro5.chr20 31547393 643 + 66533130 ACCAACAGCAGTTCCGCGTAGGTGCTCTGGGAGCCCTGGGCACCAGGTGGTTTCATGGCCTGCACACAGCCGATGGTAGGCTGTCCAAAGTTGTTAAACAGCGGTCTGAAAGAGGCAGCGGCTCCTGGCCCTGAGCCTGACGGCGACGGGACGCTTCCTGTAGGGACCGGAGTGCCCGGCCCAGGGGTGCTGGAGCCAGGGGTGCTGCTGGGGGCAGTGGTGGTAGGTTTGTAGAACATCCCCAACTCCTGGGCGCTGGGGAAGCCAGCAGGCTGCTCTTCGGGGGTTAGCTGCGGGACCGCTCAGCAGCGATCTGATTGGCAAGCGGGCTGCATG--CCCCCTGGTAAATCTATATTAAactttttaactgcaatttgtattaatctaaatacagttcaaatattctccaagaaaatttcacatttg----agttgagacatcctaaaatgtaaaatacacaatggatttcaaagatttcatatgaaaaaagaatgcaaactatctctaataatttttatattgattacctattgacgcaatattttggatatatattgggttaaataaaatatacaa------tttaaaaaaa--ttaTGCTACATTTTTGTTAAAAAATTTAAATAAACTATAT--GAAATTATTTCTTGGGATAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 360279 643 - 195804263 ACCAACAGCAGTTCCGCGTAGGTGCTCTGGGAGCCCTGGGCACCAGGTGGTTTCATGGCCTGCACACAGCCGATGGTAGGCTGTCCAAAGTTGTTAAACAGCGGTCTGAAAGAGGCAGCGGCTCCTGGCCCTGAGCCTGACGGCGACGGGACGCTTCCTGTAGGGACCGGAGTGCCCGGCCCAGGGGTGCTGGAGCCAGGGGTGCTGCTGGGGGCAGTGGTGGTAGGTTTGTAGAACATCCCCAACTCCTGGGCGCTGGGGAACCCAGCAGGCTGCTCTTCGGGGGTTAGCTGCGGGACCGCTCAGCAGCGATCTGATTGGCAAGCGGGCTGCACG--CCCCCTGGTAAATCTATATTAAactttttaactgcaatttgtattaatctaaatacagttcaaatattctccaagaaaatttcacatttg----agttgagacatcctaaaatgtaaaatacacaatggatttcaaagatttcatatgaaaaaagaatgcaaactatctctaataatttttatattgattacctattgacgcaatattttggatatatattgggttaaataaaatatacaa------tttaaaaaaa--ttaTGCTACATTTTTGTTAAAAAATTTAAATAAACTATAT--GAAATTATTTCTTGGGATAG i panPan2.chr4 M 261 C 0 s gorGor5.CYUI01000881v1 85527 645 - 87586 ACCAACAGCAGTTCCGTGTAGGTGCTCTGGGAGCCCTGGGCACCAGGTGGTTTCATGGCCTGCACACAACCGACGGTAGGCGGTCCAAAGTCTTTAAACAGCGGTCTGCAAGGGGCAGTGGCTCCCGGCCCTGAGCCCGACGGCGACAGGACGCTTCCTGTAGGGACCGGAGTGCCTGGCCCAGGGGTGCTGGAGCCAGGGGTGCTGCTGGGGGCAGGGGTGGTAGGTTTGTAGGACATCCCCAACTCCTGGGCGCTGGGGAAGCCAGCAGGCTGCTCTTCGGGGGTTGGCTGCGGGACCGCTCCGCAGCGATCTGATTGGCAAGCGGGCTGCACG--CCCCCTGGTAAATCTATATTAAactttttaactgcaatttgtattaatctaaatacagttcaaatattctccatgaaaatttcacatttg----agttgagacatcctaaaatgtaaaatacacaatggatttcaaagatttcatatgaaaaaagaatgcaaactatctctaataatttttatattgattacatattgacccaatattttggatatatattgggttaaataaaatatacaa------tttaaaaaaa--ttaTGCTACATTTTTGTTAAAAAATTTAAATAAACTATATATGAAATTATTTCTTGGGATAG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72324 648 + 80219 ACCGACAGCAGTTCCCTGTGGGTGCTCTGGGAGCCCTGGGCGCCAGGTGGTGTCATGGCCTGCATGCAGCCGATGG-AGGCGGTCCAAAGTCGTTAAATAGCGGTCTGAAAGGGACAGCAGCTCCTGGCACTGAGCCCAACGGCGACGGGACACTTCCTGTAGGGACCGGGGTGCCCAGCCCAGGGGTGCTGGAGCCTGGGGTGCTGCTGGGGGCAGGCGTGATGGGTTTGTAGGACATCCTTAACTCCTGGGCGCTGGGGATGCCAGCAGGCCGCTCCTCGGGGGTTGGCTGCCTGGCCGCTCAGCAGAGATCTGATTTGCAAGCTGGCTGCACGGCCCCCCTACTAAATCTGTGTTGAAttttttaactgcagtttttattaatctaaatacagttcagatattctcgatgaaaatttcacatttgagttagttgagacatactaaaatgtaaaatacacaatggatttcaaagatttcatatgaaaaaagaatgcaaactatctctagtaatttttacattgattacatgttgacacagtattttgg--atatattgagt----taaaATATGCAATTATTTTTTAAAAAAAATCTATGCTACATTTTTGTTAAAAAATTTAAATAAACTAT----GAAATTACTTCTTGGGATAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 a score=6960.000000 s hg38.chr9_KI270719v1_random 163958 5 + 176845 AAAAG s panTro5.chr20 31548036 5 + 66533130 AAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 360922 5 - 195804263 AAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 86172 5 - 87586 AAAAG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72972 5 + 80219 AAAAG i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s papAnu3.chrUn_NW_003942052v1 16380 5 - 24596 AAAAG i papAnu3.chrUn_NW_003942052v1 N 0 C 0 a score=218638.000000 s hg38.chr9_KI270719v1_random 163963 144 + 176845 GGGACATGATTAAATATTTACTTAAACTTTTTTCAAAAACATATCTTTA--AAAC--ACATTTTCAAACACAACAAAA-GTATTTTAATTTTGTATAGGTAAAATAAACTTATTCCTGCTGAAATTCAATCATGGCATGATTTCCTTTG s panTro5.chr20 31548041 145 + 66533130 GGGACATTATTAAATATTTACTTAAACTTTTTTCAAAAACATATCTTTA--AAAC--ACATTTTCAAACAAAAAAAAAAGTATTTTGATTTTGAATAGGTAAAATAAACTTATTCCTGCTGAAATTCAACCATGGCATGATTTCTTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr4 360927 143 - 195804263 GGGACATTATTAAATATTTACTTAAACTTTTTTCAAAAACATATCTTTA--AAAC--ACATTTTCAAACAAAAAAAA--GTATTTTGATTTTGAATAGGTAAAATAAACTTATTCCTGCTGAAATTCAACCATGGCATGATTTCTTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 86177 144 - 87586 GGGACATGATTAAATATTTACTTAAACTTTTTTCAAAAACATATCTTTA--AAAC--ACATTTTCAAACACAACAAAA-GTATTTTAACTTTGAATAGGTAAAATAAACTTATTCCTGCTGAAATTCAATCATGGCATGATTTCCTTTG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 72977 144 + 80219 GGGACATTATTAAATATTTACCTAAA-TTTTTTCAAAAATGTATCTTTAACAAAAACACATTTTCAAACAA---AAAA-ATATTTTAATTTTGAATAGGTAAAATAAACTTATTCCTGCTGAAATTCAATCCTGGCATGATTTCTTTTT i rheMac8.chrUn_NW_014841389v1 C 0 C 0 s papAnu3.chrUn_NW_003942052v1 16385 146 - 24596 GGGACATTATTAAATATTTACCTAAATTTTTTTCAAAAACATATCTTTAACAAAA--ACATTATCAAACAAAACAAAA-GTATTTTAATTTTGAATAGGTAAAATAAACTTATTCCTCCTGAAATTCAATCCTGGCATGATTTCTGTTT i papAnu3.chrUn_NW_003942052v1 C 0 C 0 s rhiRox1.JABR01156953v1 164 140 - 332 GGGACATTAT----TATTTGCTTAAATTTTTTTCAAAAAAGTATGTTTAACAAAA--ACATTTTCAAAGAAAACAAAA-G--TTTTAATTTTGAATAGGTAAAATAAACTTATTCCTGCTAAAATTCAATCATGGCATGATTTCTTTTT i rhiRox1.JABR01156953v1 N 0 N 0 a score=1153576.000000 s hg38.chr9_KI270719v1_random 164107 925 + 176845 TGTGCATTTGAGGACTCTGTTTATAACCCAGATAAAAACATAAAACTTTTGAAACTCTTCTAAGAATGTCTAACACAAATTACCTGTATAGGTATCACGGCACAGACGATGCTGAGGCCGGACTGACTGAAGAAGAACAGGCTGAAGATGCTGTACTCACACAGCAGCTGGCCCCCAGGTTACCCGCCCTTCGTGTACATGGCGATGGTCACCTGGCTCACCAGCAAAGTGAACAACAGGTCGGTGGCAGTCAGCCGCATAACTGTG--TAGAAGGTGGTCTCCTTCTGCTCCTTGCGCGACTTGCACAGCACCACGATGGCCACCAGGTTGCCCACCACCCCGAAAATGGACGGTCCCAGGCTGTCCAGCAGATTGGGCTCCAGGCCAAGGACACACTGGCCTGGGAAGGGGTTAACATGACAGTGGCTGGTGGTACACAGCCCTGGAGTGTGAAGCTGAGTCTGGAGATGGCAGAAGAGAGACAAAGCCACCATGAGTGAAATGACCACCTGCAGGGCATTAGACCCGCGCCCAGGAAAC-GGGATGCTAACATGACAAGGGAGGAACTCAATCCCACTCTCTGGATTGCAACCACTTACCAACGGCAGCCACCCAAATCTCTAGGCTCCCTCTGCTCCTGCCAGCAGCACACCCTTGCTGATCTTAATATTTATAAACTGAGTCTCTCATTCCTCTTCCTCCCCCCAGC--------------CTATCTCACTCCACTGACAAGACCTATCTCCAGGGAAAGGTAGCGCCCTAGTATTATTCCCGACAGATTCTGAGTTAATAAAATGCACATTGAAACCCTGGAAGACAATTTGGAAAGCGCTCTCTTTCCTCCTTGGCTCCCCTGGCAGCGCCCCATCTCCGCACCCTTTGCCCGATGGCCCACATCCCATGTCACGTGTAGCGGCCCCAGTGGTGG s panTro5.chr20 31548186 927 + 66533130 CACGCATTTGAGGACTCTGTTTATAACCGAGATACAAACATAAAACTTTTGAAACTCTTCTAAGAATGTCTAACACAAATTACCTGTATAGATATCACGGCACAGATGATGCTGAGGCCGGACAGACTGAAGAAGAACAGGCTGAAGATGCTGTACTCGCACAGCAGCTGGCCCCCAGGTTACCCACCCTTCATGTACGTGGCGATGGTCACCTGGCTCACCAGCAAAGTGAACAACAGGTCGGTGGCGGCCAGCTGCATAACAGTGAACAGAAGATGGTCTCCTTCTGCTCCTTGTGTGACTTGCACAGCACCACGATGGCCACCAGGTTGCCCACCACCCCGAAAATGGATGGTCCCAGGCTGTCCAGCAGATTGGGCTCTAGGCCAAGGACACATTGGCCTGGGAAGGTGTTAACATGACAGTGGCTGGTGGTACGCAGCCCTGGAGTGTGAAGCTGAGTCTGGGCATGGCAGAAGAGAGACAAAGCAACCACGAGTGAAATGACCACCTGCAGGGCGTTAGACCCGCGCCCAGGAAAC-GGGATGCTAACGTGACAGGGGAGGAATTCAATCCCACTCTCTGGATTGCAACCACTTACCAACGGCAGCCACCCAAATCCCCAGGCTCCCTCTGCTCCTGCCAGCAGCACACCCTTGCTGATCTTAATATTTATAAACTGAGCCTCCCATTCCTCTTCCTCCCCCCAAC--------------CTATCTCACTCCACTGACAAGACCCATCTCCAGGGAAAGGTATTTCCCTAGTATTATTCCCGACAGATTCTGAGTTAATAAAATGCACATTGAAACCTTGGAAGACAATTTGGAGAGTGCTCTCTTTCCTCCTTGGCTCCCCTGGCAGCGCCCCATCTCCGTGCCCTCTACCCAATGGCCCACATCCCATGTCATGTGTAGCGGCCCCAGTGGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr4 361070 927 - 195804263 CACGCATTTGAGGACTCTGTTTATAACCGAGATACAAACATAAAACTTTTGAAACTCTTCTAAGAATGTCTAACACAAATTACCTGTATAGATATCACGGCACAGATGATGCTGAGGCCGGACAGACTGAAGAAGAACAGGCTGAAGATGCTGTACTCGCACAGCAGCTGGCCCCCAGGTTACCCACCCTTCATGTACGTGGCAATGGTCACCTGGCTCACCAGCAAAGTGAACAACAGGTCGGTGGTGGCCAGCCGCATAACAGTGAACAGAAGATGGTCTCCTTCTGCTCCTTGCATGACTTGCACAGCACCACGATGGCCACCAGGTTGCCCACCACCCCGAAAATGGATGGTCCCAGGCTGTCCAGCAGATTGGGCTCTAGGCCAAGGACACATTGGCCTGGGAAGGTGTTAACATGACAGTGGCTGGTGGTACGCAGCCCTGGAGTGTGAAGCTGAGTCTGGGCATGGCAGAAGAGAGACAAAGCAACCACGAGTGAAATGACCACCTGCAGGGCGTTAGACCCGCGCCCAGGAAAC-GGGATGCTAACATGACAGGGGAGGAATTCAATCCCACTCTCTGGATTGCAACCACTTACCAACGGCAGCCACCCAAATCCTCAGGCTCCCTCTGCTCCTGCCAGCAGCACACCCTTGCTGATCTTAATATTTATAAACTGAGCCTCCCATTCCTCTTCCTCCCCCCAAC--------------CTATCTCACTCCACTGACAAGACCCATCTCCAGGGAAAGGTATTTCCCTAGTATTATTCCCAACAGATTCTGAGTTAATAAAATGCACATTGAAACCTTGGAAGACAATTTGGAGAGTGCTCTCTTTCCTCCTTGGCTCCCCTGGCAGCGCCCCATCTCCGTGCCCTCTACCCAATGGCCCACATCCCATGTCATGTGTAGCGGCCCCAGTGGTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 86321 925 - 87586 TATGCATTTGAGGACTCTGTTTATAACCCAGATAAAAACATAAAACTTTTGAAACTCTTCTAAGAATGTCTAACACAAATTACCTGTATAGATATCACAGCACAGACGATGCTGAGGCCGGACTGACTGAAGAAGAACAGGCTGAAGATGCTGTACTCACACAGCAGCTGGCCCCCAGGTTACCTGCCCTTCATGTACATGGCGATGGTCACCTGGCTCACCAGCAAAGTGAACAACAGGTCGGTGGCGGCCAGCCGCATAACTGTG--TAGAAGGTGGTCTCCTTCTGCTCCTTGCGTGACTTGCACAGCACCACGATGGCCACCAGGTTGCCCACCACCCCGAAAATGGACGGTCCCAGGCTGTCCAGCAGATTGGGCTCCAGGCCGAGGACACATTGGCCTGGGAAGGGGTTAACATGACAGTGGCTGGTGGTACGCAGCCCTGGAGTGCGAAGCTGAGTCTGGAGATGGCAGAAGAGAGACAAAGCCACCATGAGTGAAATGACCACCTGCAGGGCGTTAGACCTGCGCCCAGGAAAT-GGGATGCTAACATGACAAGGGAGGAACTCAATCCCACTCTCTGGATTGCAACCACTTACCAACGGCAGCCACCCAAATCTCCAGGCTCCCTCTGCTCCTGCCAGCAGCACACCCTTTCTGATCTTAATATTTATAAACTGAGCCTCCCATTCCTCTTCCTCCCCCCAGC--------------CTATCTCACTCCACTGACAAGACCCATCTCCAGGGAAAGGTAGCTCCCTAGTATTATTCCCGACAGATTCTGAGTTAATAAAATGCACATTGAAACCCTGGAAGACAATTTGGAAAGCGCTCTCTTTCCTCCTTGGCTCCCCTGGCAGCGCCCCATCTCCGCGCCCTTTGACCGATGGCCCACATCCCATGTCACGTGTAGCCTCCCCAGTGGTGG i gorGor5.CYUI01000881v1 C 0 C 0 s rheMac8.chrUn_NW_014841389v1 73121 937 + 80219 TATGCATTTGAGGACTCGGTTTATAACCCAGATA-AAACATAAAGCTTATGAAACTCCTCTGAGAATGTCGAACACAAATTACCTGTATAGATATCAGGGTGCAGATGATGCTGAGGCCGGGCTGGCTGAAGAAGAGCAGGATGAAGATGCTGTACTGGCACAGGGGCTGGCCCC--GGTTACCCGTCCTTCATGTACGTGGCGATGGTCACCTGGCTCACCAGCAAAGTGAACAACAGGTCGTTGGTGGCCAGCCGCATACCAGTGTGTAGAAGGCGGTCTCCTTCTGCTCCTCGCGCGACTTGCACAGCAACACGATGGCCACCAGGTTGCCCACCACCCCGAAAATGGACGGTCCCAGGCTGTCCAGCAGATTGGGCTCCAGGTGAGGGACACATTGACCTAGGAAGGGGTTAACATGACGGTGGCTGGTGGTGTGCAGCCCTGGAGTGTGAAGCTGAGTCTGGGG-TGATAGAAGAGAGACAAAGCCTCCATGAGTGAAATGACCACCTGCAGGATGTCAGAGCCACGCCCAGGAAAC-GGGATGCTAACATGACAAGGGAGGATCTCAGTCCCACTCTCTGGATTGCAACCACTTACCAACTGCAGCCACCCAAATCTCCAGGCTCGCTCTGCTCCTGCCAGCGGCACACCATTGCTGATCTTAATATGTATAAACTGAGCCTCACATTCCTCTTCCTCTCCCCCGCACCCCCCCCCACGCCTATCTCACTACTCTGACAAGAGCCATCTTCAGGGAAAGGTAACTCCCTAGTATTATTCCTGACAGATTCTGAGTTAATAAAATGCTCACAGAAACCCTGGAAGACAATTTGGAGAGTGTTCTCTTTCCTCCCTGGCTCCGCTGGCAGTGCCCCATCTCCACGCCTTCTACCCAATGGCCCAAATCCCATGTCACGTGTAGCGGCCCCAGTGGTGG i rheMac8.chrUn_NW_014841389v1 C 0 N 0 s papAnu3.chrUn_NW_003942052v1 16531 938 - 24596 TATGCATTTGAGGACTCTGTTTATAACCCAGATA-AAACATTAAGCTTATGAAACTCCTCTGAGAATGTAGAACACAAATTACCTGTATAGATATCAGGGTGCAGATGATGCTGAGGCCGGGCTGGCTGAAGAAGAGCAGGATGAAGATGCTGTACTGGCACAGGGGCTGGCCCC-AGGTCACCTGCCCTTCATGTACGTGGCGATGGTCACCTGGCTCACCAGCAAAGTGAACAACAGGTCTGTGGCGGCCAGCCGCATACCAGTGTGTAGAAGGCGGTCTCCTTCTGCTCCTTGCGCGACTTGCACAGCAGCACGATGGCCACCAGGTTGCCCACCACCCCGAAAATGGACGGTCCCAGGCTGTCCAGCAGATTGGGCTCCAGGTGAGGGACACATTGACCTGGGAAGGGGTTAACAGGACGGTGGCTGGTGGTGTGCAGCCCTGGAGTGTGAAGCTGAGTCTGGGG-TGATGGAAGAGAGACAAAGCCTCCATGAGTGAAATGACCACCTGCAGGATGTCAGAGCTGCGCCCAGGAAACGGGGGTGCTAACATGACAAGGGAGGATCTCAGTCCCACTCTCTGGATTGCAACCACTTACCAACTGCAGCCACCCAAATCTCCAGGCTCACTCTGCTCCTGCCAGCGGCACACCATTGCTGATCTTAATATGTATAAACTGAGCCTCACATTCCTCTTCCTCCCCCCCAC-CGCCCTCCCACGCCTATCTCACTACTCTGACAAGATCCATCTTCAGGGAAAGGTAACTCCCTAGTATTATTCCTGACAGATTCTGAGTTAATAAAATGCTCACGGAAACCCTGGAAGACAATTTGGAGAGTGTTCTCTTTCCTCCCTGGCTCCACTGGCAGTGCCCCATCTCCACGCCTTCTACCCAATGGCCCAAATCCCATGTCACGTGTAGCGGCCCCAGTGGTGG i papAnu3.chrUn_NW_003942052v1 C 0 N 0 a score=184629.000000 s hg38.chr9_KI270719v1_random 165032 340 + 176845 GGCCTAAGACAATGaaacctaagactaattggtgtacctgaggaagaagtgaattctaaaagctaggaaaacatatttgggggaataatcaaggaaaacttctgtggccttgtgagagacctagacatccaaataaaagaagcacaaataacacctgggaaattcatcacaaaaatatcttagcctaggcacattgtcattgggttatccaaagttaagacaaaagaaagaatcttaagagctgtgagacagaagcactaggtaacctataaaggaaaacctatcaaactaacagcagattttgcagcagaaaccttaaaagctagatgggattggggcc s panTro5.chr20 31549113 340 + 66533130 GGCCTAAGACGATGGaacctgagactaattggtgtacctgaggaagaagtgaattctaaaagccaggaaaacatatttgggggaataatcaaggaaaacttccgtggccttgtgagagacctagacattcaaatacaagaagcacaaataacacctgggaaattcatcacaaaaagatcttagcctaggtacattgtcattaggttatcgaaagttaagacaaaggaaagaatcttaagagctgtgagacagaagcactaggtaacctataaaggaaaacctatcaaactaacagcagattttgcagcagaaaccttacaagctagatgggattggggcc i panTro5.chr20 C 0 C 0 s panPan2.chr4 361997 340 - 195804263 GGCCTAAGACGATGGaacctgagactaattggtgtacctgaggaagaagtgaattctaaaagccaggaaaacatatttgggggaataatcaaggaaaacttccgtggccttgtgagagacctagacattcaaatacaagaagcacaaataacacctgggaaattcatcacaaaaagatcttagcctaggtacattgtcattaggttatcgaaagttaagacaaaggaaagaatcttaagagctgtgagacagaagcactaggtaacctataaaggaaaacctatcaaactaacagcagattttgcagcagaaaccttacaagctagatgggattggggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01000881v1 87246 340 - 87586 GGCCTAAGACAATGaaacctaagactaattggtgtacctgaggaagaagtgaattctaaaagctaggaaaacatatttgggggaataatcaaggaaaacttccgtggccttgtgagagacctagacatccaaataaaagaagcacaaataacacctgggaaattcaacacaaaaagatcttagcctaggcacattgtcattgggttatccaaagttaagacaaaagaaagaatcttaagagctgtgagacagaagcactaggtaacctataaaggaaaacctatcaaactaacagcagattttgcagcagaaaccttaaaagctagatgggattggggcc i gorGor5.CYUI01000881v1 C 0 N 0 a score=441311.000000 s hg38.chr9_KI270719v1_random 165372 859 + 176845 ctttcttcagcctcctcaaacaaaacaattatcagccaagaattatgtatccagcaaaactaaacatcatatatgaaagaaagatacagtcattttcagacaaacaaatgctgacagaatttgccattaccaaaccagcactgtaagaactgctaaaaggagctctaaatcatgaaacaaaccctggaaacacatcaaaacagaacttcattaaagcataaatcacacaagacctataaaacaaaaatacaagttaaaaagc-------aaaaac-aaaaaac--aaaaacaaagtacagaggcaacagagagcatgatgaaagaaatggtacctcactttttaatactaatgttggttgtaaatggcttcaatgctccacttacaagatacagaaccacagaatggataataactcaccaactaactatctgctgccttcaggagactcacctaacacataatgacctacataaacttaaggaaagtggcagaaaaaggcatttcatgcaaactgacacaaaaagcaagcagcagtagctattctcatatgagacaaaacaaactttaaagcaacagtagctaaaagagacaaagac-agacagtatataatggtaaaggtctcattcaacagaaaaacatgacaatcctaaacatacatgaagctaacactggagctcccaaatttataaaacaatcactagtaaacataagaaataagatagatagcaacacaataatagtgagggaacttcattactccactgacagcacctgtca-gtcatcaagacagaaagtcaacaaagaaacactggatttaaactatactttggaacaaatggacttaacagatatata-agaacatttcat s panTro5.chr20 31549453 868 + 66533130 ctttcttcagcctcctcaaacaaaacaagtatcagccaagaattctgtatccagcaaaactaaacatcatatatgaaagaaagatacagttattttcagacaaacaaatgctgacagaatttgccattaccaaaccagcactgtaagaactgctaaaaggagctctaaatcatggaacaaatcctggaaacacatcaaaacagaacttcattaaagcatacatcacacaagacctataaaacaaaaatacaagttaaaaagcaataataaaaaacaaaaaaac--aaaaacaaagtacagaggcaacaaagagcatgatgaaagcaatggtacctcactttttaatactaatgttggttctaaatggcttcaatgctccacttacaagatacagaaccacataatggataagaactcaccaactaactatctgctgccttcaggagactcacctaacacataacgacctacataaacttaagtaaagtggtagaaaaaggcatttcatgcaaatggacaccaaaagcaagcagtggtagctattctcatatgagacaaagcaaactttaaagcaacagtagctaaaagagacaaagacaagacaa-agacaaagacaaaggtctcattcaacagaaaaatatgacaatcctaaacatacatgaacctaacactggagctcccaaatttataaaacaattactagtagacataagaaatgagatagacagcaacacaataatagtg-ggggacttcaatactccattgacagcactagacaggtcatcaagacagaaagtcaacaaagaaacactggatttaaaatatactttggaacaaatggacttaacagatatatacagaacatttcat i panTro5.chr20 C 0 C 0 s panPan2.chr4 362337 867 - 195804263 ctttcttcagcctcctcaaacaaaacaagtatcagccaagaattctgtatccagcaaaactaaacatcatatatgaaagaaagatacagttattttcagacaaacaaatgctgacagaatttgccattaccaaaccagcactgtaagaactgctaaaaggagctctaaatcatgaaacaaatcctggaaacacatcaaaacagaacttcattaaagcatacatcacacaagacctataaaacaaaaatacaagttaaaaagcaataataaaaaac-aaaaaac--aaaaacaaagtacagaggcaacaaagagcatgatgaaagcaatggtacctcactttttaatactaatgttggttctaaatggcttcaatgctccacttacaagatacagaaccacataatggataagaactcaccaactaactatctgctgccttcaggagactcacctaacacataacgacctacataaacttaagtaaagtggtagaaaaaggcatttcatgcaaatggacaccaaaagcaagcagtggtagctattctcatatgagacaaagcaaactttaaagcaacagtagctaaaagagacaaagacaagacaa-agacaaagacaaaggtctcattcaacagaaaaatatgacaatcctaaacatacatgaacctaacactggagctcccaaatttataaaacaattactagtagacataagaaatgagatagacagcaacacaataatagtg-ggggacttcaatactccattgacagcactagacaggtcatcaagacagaaagtcaacaaagaaacactggatttaaaatatactttggaacaaatggacttaacagatatatacagaacatttcat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01001867v1 30757 862 - 49735 ctttcttcagcctcctcaaacaaaacaattatcagccaagaattttgtatccagcaaaactaaacatcatatatgaaggaaagatacagtcattttcagacaaacaaatgctgacagaatttgccattaccaaaccagcactgtaagaactgctaaaaggagctctaaatcatgaaacaaattctggaaacacatcaaaacagaacttcattaaagcataaatcacacaagagctataaaacaaaaatacaagttaaaaagc-------aaaaacaaacaaacaaaaaaacaaagtatagaggcaacaaagagcatgatgaaagcaatggtacctcactttttaatactaatgttggttgtaaatggcttaaatgctccacttacaagatacagaaccacagaatggataagaactcaccaactaactatctgctgccttcaggagactcacctaacacataatgatttacataaacttaaggaaagtggtagaaacaggcatttcatgcaaatggacaccaaaagcgagcagcagtagctattctcatatgagacaaaagaaactttaaagcaacggtagctaaaagagacaaagac-agacagtatataatggtaaaggtctcatccaacagaaaaatatgacaatcctaaacatacatgaacctaacactggagctcccaaatttataaaacaattactagtagacataagaaatgagatagacagcaacacaataatagtg-ggggacttcaatactccactgacagcactagacaggtcatcaaggcagaaagtcaacaaagaaacactggatttaaactatactttggaactaa-ggacttaacagatatatacagaacatttcat i gorGor5.CYUI01001867v1 N 0 C 0 a score=600.000000 s hg38.chr9_KI270719v1_random 166231 1 + 176845 c s panTro5.chr20 31550321 1 + 66533130 c i panTro5.chr20 C 0 C 0 s panPan2.chr4 363204 1 - 195804263 c i panPan2.chr4 C 0 C 0 s ponAbe2.chr1_random 33629377 1 + 35968885 c i ponAbe2.chr1_random N 0 I 3549 e gorGor5.CYUI01001867v1 31619 0 - 49735 C a score=1441538.000000 s hg38.chr9_KI270719v1_random 166232 2780 + 176845 caacaaccacagaatacacattctattcaacagcacatggaattttctccaagatagaccatatgataggccataaaatgagtctcaataaatttaagaaaattgaaattgtatcacgcaccctctcagatcacagtggaataaaactgaaaatcaactccaaaaggaatcttcaaaaccatgcaaatacatggaaattaaataacctgctcctgaatgagcactgggtaaaaaacaaaatcaagatggaaatggaaaaaatttcttcgaactggatgacacaacctatcaagacctctgggatacaggaaaggcagtgctaagaggaaagtttgtagccctaaacacctatgtcaaaaagtgtgaaagagcacaaacagacaatctaagttcacatctcagggaactggagaagcaggaacaagccaaacccaatcccagcaaacaaaggaaataaccaagattagagcagaactaaatgaaattgacacagcaacaacaacaacaacaaatacaaaacatgaataaaataaaaagttggttatttgaaaagataaacaaaatcgatagaccatta-taagattaaccaagaaaagaagagaggaaatccaaataacctcactaagaaatgaaacaggggatattacaactgacaccactgaaatattaaagattattcaagggtactatgaacaccttttggcacataaactagaaaacccagaagagttgcataaattcctggaaaaatacaaccctcctagcttaaatcaggaagaagtagataccccaagcagaccaataaagcaagcagcaagattgaaatggtaattttaaaattaccaacaaaaaatgccgaggaccagacagattcacagcagaattctaccagacattcaaagaatattttatttcattcaaagaagaaatgataccaatcctttcacactattccacaagacagagaaagaagaaacactccctgattcattctatgaagccagcatcaccctaataccaaaaccatgaaaggacataaccaaaaaagaaaactacagaccaatatccatgatgaacacagatgccaaaatccttaacaaaatactatctaactgaatccaacaatatatcaaagagataatccaccatgatcaagtgggtttcataccagtgacacaggaatggtttaacatatgcaagtcaataaatgtgatacaccaaataaacag-aattaaaaaaaaa---cacatgattttatcaacagatgcagaaaaagcatttgacaaaatctagcattgctttatgattaaagctctcagcaaaataggcatacaagggacataccttaatgtaataaaagccatctatgacagacccacagccaacataatactgaatggggaaaaggtgaaagcattccctttgagaactggaacaagacgaagagcctactctcaccactcctcttcaacatagtactggaagtcctagccagagcaatcagacaaaagaaggaaatagaggaaatccaaatc-gtaaagaggaagtcaaactgttactggttgctgacgatatgatctttcgccttgaaaaccctacggactcctctagaaagctcctagaactgacaaaagaattcagcaaagtttccagatacgagattaatgtacacaaatcagtagctcttctatacatcaacagctaccaagctgagaatcacatcaggaactcaaccccttttacaatagctgcaaaaaacaaacaaa-aaaacaaacaaaacttaggaatatacctagcaaagtaatcaaaagacctctacaatgaaaattacaaaacactgctgaaagaaatcatagatggagccaagcacgttggcgcatgcctataatcccagctactcgggaaactgaggcaggagaatcgcttgaacccgggaggcagaagttgtagtgagccgagatcacaccattgcactcccacctcagcgacaagagcgaaactacctctgaaaaaaaaaaaaaaaaaaaaaaaaacaagaaagaaaagaaatcatagatgacacaaacaaatggaaacacatccccatgctcatggatgggtagaaccaatattgtgaaaattaccattcttttaaaggcaatctacgaattcaatgcaatccccatatgaataccaccatcatccctcacagaattacaaaaa-aattctaaaattaatatggaaccaaaagagtgccatgtagccgaaccaaggctaagcaaaaagaacaaacctggaggcatcacactacttgatttcaaactgtacaataaggccatagttaccaaaacagcatggtactggtttaaaaataggcacatagaccaatggaacagaagagagaacccagaaattaacccaaatacttacagccaactgatcttcgacaaagcaaacaaaaacataaagtggggaaaggacacccttttcaacacatgacgttgggataattggcaagccacatgtagggtaataaaactggagtctcatctctcaccttatacaaaaatctactcaagatggattaagaacttaaacctaattcctgaactgtaaaaattctagaagataacactggataaacccttctagacattggcataggcaaggatttcatgaccaaaaacccaaatgcaaatgcaataaaaacaaagataaatagctgggacttaaataaactaaagagcttttgcatggcaaagggagcagtcagcagagtaaatagacaaatcgcagagtgggac s panTro5.chr20 31550322 2773 + 66533130 caacaaccacagaatacacattctattcaacagcacatggaattttctccaatatagaccacatgataggccataaaacgagtctcaataaatttaagaaaattgaaattgtatcacgcactctctcagatcatagtggaataaaactgaaaatcaactccaaaaggaatcttcaaaaccatgcaaatacatggaaattaaataacctgctcctgaatgagcattgggcgaaaaacgaaatcaagatggaaatgtaaaaaatttcttcgaactggatgacacaacctatcaagacttctgggatacagcaaaggcactgctaagagcaaagtttgtagccctaaacacctacgtcaaaatgtctgaaagagaacaaacagattatctaagttcacatctcagggaactggagaagcaagaacaagccaaacccaatcccagcaaacaaacgaaataaccaagatcagagcagaactaaatgaaattgacacagcaacaacaacaacaacaaatacaaaacatgaataaaacaaaaagttggttatttgaaaagataaataaaattgatagaccatta-taagattaaccaagaaaagaagagagaaaatccaaataacctcactaagaaatgaaacaggggatattacaactgacaccactgaaatattaaagattattcaagggtactatgaacaccttttggcacataaactagaaaacccagaagagttgcataaattcctggaaaaatacaaccctcctagcttaaatcaagaagaagtagataccccaagcagaccaataaagcaagcagcaagattgaaatggtaattttaaaattaccaacaaaaaaagccgaggaccagacagattcacagcagaattctaccagacattcaaagaatgtcttctttcattcaaagaagaaatgataccaatcctttcacactattccacaagacagagaaagaagaaaccctccctgattcattctatgaagccagcatcactctaataccaaaaccatgaaaggacataaccaaaaaagaaaactacagaccaatatccttgatgaacgcagatgccaaaatccttaacaaaatactatctatctgaatccaacaacatatcaaaaagataatccatgatgatcaagtgggtttcataccagtgatacaggaatggtttaacatatgcaagtcaataaatgtgatacaccaaataagcag-aaataaaaaaaaaactcacatgattatatcaacagatgcagaaaaagcattcgacaaaatctaacattgctttatgattaaagctctcagcaaaataggcatacaagggacataccttaatgtaat-aaagccatctatgacaaacccacagccaacataatactgaatggggaaaaggtgaaagcattccctttgagaactggaacaagacgaagagcctactctcaccactcgtcttcaacaaagtactggaagtcctagccagagcaatcagacaa---aaggaaatagaggaaatccaaatcggtgaaaaggaagtcaaactgtcactggttgctgacgatgtgatctttcgccttgaaaaccctacagactcctctagaaagctcctagaactgataaaagaattcagcaaagtttccagatacaagattaatggacacaaatcagtagctcttctatacatcaacagctaccaagcagagaatcacatcaagaactcaaccccttttacaatagctgcgaaaaacaaacaaagaaaaaaaacaaaacttaggaatacacctagcaaagaaatcaaaagacctctacaatgaaaattacaaaacactgctgaaagaaatcatagatggagccaggcacggtggcgcatgcctataatcccagctactcaggaaactgaggcaggagaatcgcttgaacccaggaggcagaagttgtagtgagctgagatcacaccattgcactcccacttcagcgacaagagcgaaactccctctg--------gaaaaaaaaaaaaaaatcaagaaagaaaagaaatcatagatgacacaaacaagtggaaatgcatgcccatgctcatggatgggtagaaccaatattgtgaaaattaccattctgttaaaggcaatctacaaattcaatgcaatccctatctgaatagcaacatcattcttcaaagaattacaaaaacaattctaaaattaatatggaaccaaaagagagccatgtagccaaaccaaggctaagcaaaaagaacaaacctggaggcatcacactacttgatttcaaactgtacaataaggccatagttaccaaaacagcatggtactggtttaaaaataggcacatagaccaatggaagagaagagagaacccagaaattaacccaaatgcttacagccaactgatcttccacaaagtaaacaaaaacgtaaagtggggaaaggacacccttttcaacacatgatgttgggatcattggcgagccacatgtaggggaataaaactggattctcacctctcaccttatacaaaaatctac-caagatggaataagaacttaaacctaattcctgaactataaaaattctggaagataacactggataaacccttctagacattggcacaggcaagattttcatgaccaagaacccaaacgcaaatgcaataaaaacaaagataaatagctgggacttaattaaactaaagagcttttgcatggcaaaaggaacagtcagcagagtaaataggcaacccacagagtgggac i panTro5.chr20 C 0 C 0 s panPan2.chr4 363205 2772 - 195804263 caacaaccacagaatacacattctattcaacagcacatggaattttctccaatatagaccacatgataggccataaaacgagtctcaataaatttaagaaaattgaaattgtatcacgcactctctcagatcatagtggaataaaactgaaaatcaactccaaaaggaatcttcaaaaccatgcaaatacatggaaattaaataacctgctcctgaatgagcattgggggaaaaacgaaatcaagatggaaatgtaaaaaatttcttcgaactggatgacacaacctatcaagacttctgggatacagcaaaggcactgctaagagcaaagtttgtagccctaaacacctacgtcaaaatgtctgaaagagaacaaacagattatctaagttcacatctcagggaactggaggagcaagaacaagccaaacccaatcccagcaaacacaggaaataaccaagatcagagcagaactaaatgaaattgacacagcaacaacaacaacaacaaatacaaaacatgaataaaacaaaaagttggttatttgaaaagataaataaaattgatagaccgtta-taagattaaccaagaaaagaagagagaaaatccaaataacctcactaagaaatgaaacaggggatattacaactgacaccactgaaatattaaagattattcaagggtactatgaacaccttttggcacataaactagaaaacctagaagagttggataaattcctggaaaaatacaaccctcctagcataaatcaagaagaagtagataccccaagcagaccaataaagcaagcagcaagattgaaatggtaattttaaaattaccaacaaaaaaagccgaggaccagacagattcacagcagaattctaccagacattcaaagaatgtcttctttcattcaaagaagaaatgataccaatcctttcacactattccacaagacagagaaagaagaaaccctccctgattcattctatgaagccagcatcactctaataccaaaacaatgaaaggacgtaaccaaaaaagaaaactacagaccaatatccttgatgaacgcagatgccaaaatccttaacaaaatactatctatctgaatccaacaacatatcaaaaagataatccatgatgatcaagtgggtttcataccagtgatacaggaatggtttaacatatgcaagtcaataaatgtgatacaccaaataagcagaaattaaaaaaaaaactcacatgattatatcaacagatgcagaaaaagcattcgacaaaatctaacattgctttatgattaaagctctcagcaaaataggcatacaagggacataccttaatgtaat-aaagccatctatgacaaacccacagccaacataatactgaatggggaaaaggtgaaagcattccctttgagaactggaacaagacgaagagcctactctcaccactcctcttcaacaaagtactggaagtcctagccagagcaatcagacaa---aaggaaatagaggaaatccaaatcggtgaaaaggaagtcaaactgtcactggttgctgacgatgtgatctttcgccttgaaaaccctacagactcctctagaaagctcctagaactgataaaagaattcagcaaagtttccagatacaagattaatggacacaaatcagtagctcttctatacatcaacagctaccaagcagagaatcacatcaagaactcaaccccttttacaatagctgcgaaaaacaaacaaa-gaaaaaaacaaaacttaggaatacacctagcaaagaaatcaaaagacctctacaatgaaaattacaaaacactgctgaaagaaatcatagatggagccaggcacggtggcgcatgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacccaggaggcagaagttgtagtgagctgagatcacaccattgcactcccacctcagcgacaagagcgaaactccctctg---------ggaaaaaaaaaaaaatcaagaaagaaaagaaatcatagatgacacaaacaagtggaaatgcatgcccatgctcatggatgggtagaaccaatattgtgaaaattaccattctgttaaaggcaatctacaaattcaatgcaatccctatctgaatagcaacatcattcttcaaagaattacaaaaacaattctaaaattaatatggaaccaaaagagagccatgtagccaaaccaagtctaagcaaaaagaacaaacctggtggcatcacactacttgatttcaaactgtacaataaggccatagttaccaaaacagcatggtactggtttaaaaataggcacatagaccaatggaagagaagagagaacccagaaataaacccaaatgcttacagccaactgatcttccacaaagtaaacaaaaacgtaaagtggggaaaggacacccttttcaacacatgatgttgggataattggcgagccacatgtaggggaataaaactggattctcacctctcaccttatacaaaaatctac-caagatggaataagaacttaaacctaattcctgaactataaaaattctggaagataacactggataaacccttctagacattggcacaggcaagattttcatgaccaagaacccaaacgcaaatgcaataaaaacaaagataaatagctgggacttaattacactaaagagcttttgcatggcaaaaggaacagtcagcagagtaaataggcaacccacagagtgggac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01001867v1 31619 2759 - 49735 caacaatcacagaatacacattctattc-acagcacatggaattttctccaagatagaccatatgataggccataaaacgagtctcaataaatttaagaaaattaaaattgtatcacgcactctctcagatcacagtggaataaaactgaaaatcaactccaaaaggaatcttcaaaaccatgcaaatacatggaaattaaataacctgctcctgaatgagcactgggtgaaaaacaaaatcaagatggaaatggaaaaaatttcttcgaactggatgacacaacctatcaagacctctgggatacagcaaaggcagtgctaagaggaaagtttgtagccctaaacacctacgtcaaaaagtctgaaagagcacaaacagacaatctaagttcacatctcagggaactagagaagcaggaacaagccaaacccaatcccaacaaacaaaggaaataaccaagatcagagcagaactaaatgaaattgaca---caacaacaacaacaacaaatacaaaacataaataaaacaaaaagttggtta-ttgaaaagataaataaaactgatagaccattagcaagattaaccaagaaaagaagagagaaaatccaaataacctcactaagaaatgaaacaggggatattacaactgacaccactgaaatattaaagattattcaagggtactatgaacaccttttggcacataaactagaaaacctaggagagttggataaattcctggaaaaatacaaccctcctagctt-aatcaggaagaagtagataccccaagcagaccaataaagcaagcagcaagatcgaaatggtaattttaaaattaccaacaaaaaaagccgaggaccagacagattcacagcagaattctaccagacattcaaagaacgtcttctttcattcaaagaaaaaatgataccaatcctttcacactattccacaagacagagaaagaagaaac-ctccctgattcattctatgaagccagcatcaccctaataccaaaaccatgaaa-gacataaccaaaaaagaaaactacagaccaatatccttgatgaacacagatgccaaaatccttaacaaaatactatctaactgaatccaacaacatatcaaaaagataatccaccatgatcaagtgggtttcataccagtgatacaggaatggtttaacatatgcaagtcaataaatgtgatacaccaaataaacag-aatttaaaaaaaa-ctcaaatgattatatcaacagatgcagaaaaagcattcgacaaaatctagcattgctttatgattaaagctctcagcaaaataggcatacaagggacatactttaatgtaataaaagccatctatgacaaacccacagccaacataatactgaatggggaaaaggtgaaagcattccctttgagaactggaacaagatgaggagcctactctcaccagtcctcttcaacatagtactggaagtccttgccagaacaatcagacaaaagaaagaaatagaggaaatccaaatcggtaaaaaggaagtcaaactatcactggttgctgacgatatgatctttc-ccttgaaaaccctatggactcctctagaaagct-ctagaactgataaaagaattcagcaaagtttccagatacgagattaatgtacacaaatcagtagctcttctatacatcaacagctaccaagcagagaatcacatcaagaactcaaccccttttacaatagctgcaaaaaaaaaa-----aaaaaaaaaaaaacttaggaatatacctagcaaaggaatcaaaagacctctacaatgaaaattacaaaacactgctgaaagaaatcatagatggagccaagcatgttggcgcatgcctataatcccagctactcgggaagctgaggcaggagaatcgcttgaacctgggaggcagaagttgtagtgagccgagatcacaccattgcactcccacctcagcgacaagagcgaaactccctctg--------aagaaaaaaaaaaaaa--aagaaagaaaagaaatcatagatgacacaaacagatggaaacgcatccccatgctcatggatgggtagaaccaatattgtgaaaattaccattctgttaaaggcaatctacaaattcaatgcaatccccatctgaataccaccatcattcttcacagaattacaaaaacaattctaaaattaatatggaaccaaaagagagccatgtagcccaaccaaggctaagcaaaaagaacaaacctggaggcatcacagtacttgatttcaaactgtacaataaggccatagttaccaaaacagcatggtactggtttaaaaatacgcacatagactaatggaacagaagagagaacccataaattaacccaaatacttacagccaactgatcttcgacaaagtaagcaaaaa-ataaagtggggaaaggacacccttttcaacacatgatgttgggataattggcgagccacatgtaggggaataaaactggattctcatctctcaccttatacaaaaatctactcaagatggattaaaaacttaaacctaattcctgaactataaaaattctagaagataacactggataaacccttctagacattggcataggcaaggatttcatgaccaagaacccaaatgcaaatgcaataaaaacaaagataaatagctgggacttaattaaactaaagagcttttgcatggcaaagggaacagtcagcagagtaaatagacaa-caacagagtgggac i gorGor5.CYUI01001867v1 C 0 C 0 e ponAbe2.chr1_random 33629378 3549 + 35968885 I a score=4440.000000 s hg38.chr9_KI270719v1_random 169012 6 + 176845 ccctga s panTro5.chr20 31553095 6 + 66533130 ccctga i panTro5.chr20 C 0 C 0 s panPan2.chr4 365977 6 - 195804263 ccctga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01001867v1 34378 6 - 49735 ccctga i gorGor5.CYUI01001867v1 C 0 C 0 s papAnu3.chr20 5994 6 - 71807805 ccataa i papAnu3.chr20 N 0 I 55 e ponAbe2.chr1_random 33629378 3549 + 35968885 I a score=10793.000000 s hg38.chr9_KI270719v1_random 169018 49 + 176845 -ccctgacccctgaccctgacccctaaccc-tgacccctaactcctgaccc------------- s panTro5.chr20 31553101 64 + 66533130 cccctgacccttacccctgacccctaacccttgacccctaacccctgaccctaaccctaaccct i panTro5.chr20 C 0 C 0 s panPan2.chr4 365983 64 - 195804263 cccctgacccttacccctgacccctaacccttgacccctaacccctgaccctaaccctaaccct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01001867v1 34384 16 - 49735 --------------ccctgacccctaacct---------------------------------- i gorGor5.CYUI01001867v1 C 0 C 0 e papAnu3.chr20 6000 55 - 71807805 I e ponAbe2.chr1_random 33629378 3549 + 35968885 I a score=1534.000000 s hg38.chr9_KI270719v1_random 169067 6 + 176845 aaaccc- s panTro5.chr20 31553165 6 + 66533130 taaccc- i panTro5.chr20 C 0 C 0 s panPan2.chr4 366047 6 - 195804263 taaccc- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01001867v1 34400 6 - 49735 taagcc- i gorGor5.CYUI01001867v1 C 0 C 0 s papAnu3.chr20 6055 6 - 71807805 -aagccc i papAnu3.chr20 I 55 I 900 e ponAbe2.chr1_random 33629378 3549 + 35968885 I a score=33547.000000 s hg38.chr9_KI270719v1_random 169073 73 + 176845 taaccgctatccccaaccctaacccctaacccca------accctcaccctaacccaaccctaacccctaat-------ccctaac s panTro5.chr20 31553171 86 + 66533130 taacccctatccctaatcctaacccctaaccccaaccctcaccctcaccctaacccaaccctaacccctaatctctaacccctaac i panTro5.chr20 C 0 C 0 s panPan2.chr4 366053 79 - 195804263 taacccctatccctaatcctaacccctaaccccaaccctcaccctcaccctaacccaaccctaacccctaat-------ctctaac i panPan2.chr4 C 0 I 1493 s gorGor5.CYUI01001867v1 34406 80 - 49735 ta------atccctaaccctaacccctaaccacaactctcaccctcatcctaacccaaccctaacccctaatccctaacccctaac i gorGor5.CYUI01001867v1 C 0 C 0 e papAnu3.chr20 6061 900 - 71807805 I e ponAbe2.chr1_random 33629378 3549 + 35968885 I a score=159768.000000 s hg38.chr9_KI270719v1_random 169146 636 + 176845 atctcttaaaccctaactctaaacgttgactcctaacccctaactctgaccccaatccctatctccaacccctaaccctaaacttaacccctaacccctaaccct----aacaccaaccttaaccctaGGTTCGTTACTACGTTTGTATTGACTATGTCAATGTTGATTATTATGATCGCTGTCTTTGGACTGCACGGCAGCGAGGCGATTGCGGATCTTATATTAATATTTTTGTATTGAGGCAGTGCATTAGCATTACAGGTGCTTGTTAcatgagcaatgggggtgtcatactttgggtgtcatgtctgcattaggaatgccgcatttgtcttccgaggctgcggtgtggatctcgcactgcggccgcctcggcttggccggggagaacctcggtgggtaggattcagaggggcttttggtttcccgttttccacactgaatccttctaactggtctctgaccctgattattaagggctgcaaacaggaaggattttattcaccgtctatgcggtcccgagtagtcccaaagcgaggcagtgcccccaaggtctgtgct---gagaacgctgctctgccttcgcggtgtcccccgggtgtgtgctgagcagaacgcagctccgccctcgcggtgcccccg s panTro5.chr20 31553257 638 + 66533130 ttctcttaacccctaagtctaaacgttgactcctaacccctaactctgaccccaacccctatctccaacccctaacccta-----aacccctaacccctaaccctaacaaacagcaaccttaaccctaGGTTCGTTACTACATTTGTATTGACTATGTCAATGTTGATTATTATGATCGCTGTCTTTGGACTGCACGGCAGAGAGGGGATTAAGGGTCTTATATTAATATTTTTGTATTGAGGCAGTGCATTAGCATTACAGGTGCTTGTTAcataagcaatgggggtgtcatattttgggtgtcatgtctgcattaggaatgctgcatttgtcttccgaggctgcggtgtggatctcgcactgcggccgcctcgccttggctggggagaacctcgttgggcaggattcagaggggcttttggtttcccattttccacactgaacccttctaactggtctctgaccctgattattcagggctgcaaacaggaaggattttattcaccgtcgatgcggccccgagttgtcccaaagcgaggcagtgcccccaaggtctgtgctgaggagaacgctgctctgccttcgcggtgccccccgggtctgtgctgagcagaacgcagctcagccctcgcggtgcccccg i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01001867v1 34486 624 - 49735 ctctcttaacccctaactctaaacgttgactcctaacccctaactctgaccccaacccctatctccaacccctaaccctaaacttaacccct-----------------aacaccaaccttaacccTAGGTTCGTTACTACGTTTGTATTGACTATGTCAATGTTGATTATTATGATCGCTGTCTTAGGACTGCACGGCAGCGAGGGGATTGTGGATCTTATATTAATGTTTTTGTGTTGAGGCAGTGCATTAGCACTACAGGTGCTTGTTAcatgagcaaggggggtgtcatattttgggtgtcatgtctgcattaggaatgctgcatttgtcttccgaggctgcggtgtggatctcccactgcggccgcctcaccttggctggggagaacctcggtgggcaggattcagaggggcttttggtttccc-ttttccacactgaacccttctaactggtctctgaccctgattattcagggctggaaacaggaaggattttattcaccgtcgatgcggccccgagttgtcccaaagcgaggcagtgcccccaaggtccgtgctgaggagaacgctgctctgccttcgtggtgt-ccccgggtctgtgctgagcagaacacagctccgcccttgcggtgcccccg i gorGor5.CYUI01001867v1 C 0 C 0 e papAnu3.chr20 6061 900 - 71807805 I e panPan2.chr4 366132 1493 - 195804263 I e ponAbe2.chr1_random 33629378 3549 + 35968885 I a score=473.000000 s hg38.chr9_KI270719v1_random 169782 5 + 176845 gcgcg s panTro5.chr20 31553895 5 + 66533130 gcccg i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01001867v1 35110 4 - 49735 gccc- i gorGor5.CYUI01001867v1 C 0 C 0 s ponAbe2.chr1_random 33632927 5 + 35968885 gccca i ponAbe2.chr1_random I 3549 N 0 e papAnu3.chr20 6061 900 - 71807805 I e panPan2.chr4 366132 1493 - 195804263 I a score=890.000000 s hg38.chr9_KI270719v1_random 169787 10 + 176845 ccc--------gcccggg s panTro5.chr20 31553900 18 + 66533130 cccgcccgcctgcccggg i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01001867v1 35114 7 - 49735 -----------gccgggg i gorGor5.CYUI01001867v1 C 0 N 0 e papAnu3.chr20 6061 900 - 71807805 I e panPan2.chr4 366132 1493 - 195804263 I a score=32669.000000 s hg38.chr9_KI270719v1_random 169797 148 + 176845 tctgtgctgaggagaacactgctccgccttcgctgtatctccgaagtctgtgcagaggagaactcagctccgccctcgcgatgctctcccggtctgtgctgacgagaaggcacctctgccctcgcaaagggagagcgcccttcgcaaa s panTro5.chr20 31553918 130 + 66533130 tctgtgctgaggagaacactgctccgccttcgccgtatctccgaagtctgtgcagaggagaactcagctccgccctcgcgatgctctccgggtctgtgctgaggagaaagcagctctggcctcgcaaagg------------------ i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 0 130 - 8036 tctgtgctgaggagaacactgctccgccttcgctgtatctccgaagtctgtgcagaggagaactcagctccgcccttgcgatgctcttccggtctgtgctgaggagaaggcagctccgccctcgcaaagg------------------ i gorGor5.CYUI01011323v1 N 0 C 0 e papAnu3.chr20 6061 900 - 71807805 I e panPan2.chr4 366132 1493 - 195804263 I a score=200.000000 s hg38.chr9_KI270719v1_random 169945 2 + 176845 gg s papAnu3.chr20 6961 2 - 71807805 gg i papAnu3.chr20 I 900 I 25 e panPan2.chr4 366132 1493 - 195804263 I e gorGor5.CYUI01011323v1 130 0 - 8036 C e panTro5.chr20 31554048 0 + 66533130 C a score=3903.000000 s hg38.chr9_KI270719v1_random 169947 34 + 176845 cagagcgcccttcgcaaaggcagagaggcgcaga s panTro5.chr20 31554048 16 + 66533130 ------------------cgcagagaggcgccta i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 130 34 - 8036 cagagcgccctttgcaaaggcagagaggcgcaga i gorGor5.CYUI01011323v1 C 0 C 0 e papAnu3.chr20 6963 25 - 71807805 I e panPan2.chr4 366132 1493 - 195804263 I a score=150.000000 s hg38.chr9_KI270719v1_random 169981 2 + 176845 cc s gorGor5.CYUI01011323v1 164 2 - 8036 gc i gorGor5.CYUI01011323v1 C 0 C 0 s papAnu3.chr20 6988 2 - 71807805 cc i papAnu3.chr20 I 25 I 22 e panPan2.chr4 366132 1493 - 195804263 I e panTro5.chr20 31554064 0 + 66533130 C a score=1851.000000 s hg38.chr9_KI270719v1_random 169983 20 + 176845 gccggcgcaggcgcggaggg s gorGor5.CYUI01011323v1 166 20 - 8036 gccggcgcaggcgtggaggg i gorGor5.CYUI01011323v1 C 0 C 0 e papAnu3.chr20 6990 22 - 71807805 I e panPan2.chr4 366132 1493 - 195804263 I e panTro5.chr20 31554064 0 + 66533130 C a score=-640.000000 s hg38.chr9_KI270719v1_random 170003 3 + 176845 ggc-------- s gorGor5.CYUI01011323v1 186 3 - 8036 ggc-------- i gorGor5.CYUI01011323v1 C 0 C 0 s papAnu3.chr20 7012 10 - 71807805 -gcgcgcccgc i papAnu3.chr20 I 22 N 0 e panPan2.chr4 366132 1493 - 195804263 I e panTro5.chr20 31554064 0 + 66533130 C a score=7549.000000 s hg38.chr9_KI270719v1_random 170006 35 + 176845 gcagggcgccggcgcaggcgcggagaggcgcagag s panTro5.chr20 31554064 30 + 66533130 -----gcaccggcgcaggtgcagagaggcgcacag i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 189 35 - 8036 gcagggcgccggcgcaggtgcggagaggtgcagag i gorGor5.CYUI01011323v1 C 0 C 0 e panPan2.chr4 366132 1493 - 195804263 I a score=600.000000 s hg38.chr9_KI270719v1_random 170041 1 + 176845 c s panTro5.chr20 31554094 1 + 66533130 c i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 224 1 - 8036 c i gorGor5.CYUI01011323v1 C 0 C 0 s rhiRox1.KN296924v1 879 1 - 5882 c i rhiRox1.KN296924v1 N 0 N 0 e panPan2.chr4 366132 1493 - 195804263 I a score=58543.000000 s hg38.chr9_KI270719v1_random 170042 227 + 176845 agggcaggtgGCACCAACAGCGGGTCCCTCAGGCCTCGAGCGCACGCATTCCAGTGGCCACCCAGACCATGCTCCGCCGACTGGGCGCACAAGCTGCAGTCGCCCTCTGTGTGCA-GCAGCAGCTGCCTGGCAACCCCCGAGCCCGCTCGCGCTGCCAGCATCGCAGAACCAGGGCCAGGTGTCCCAGTGGCTGCGGCCAAGCCAGGCATTCTGGCCGGCGGCGGCGG s panTro5.chr20 31554095 228 + 66533130 gaggcaggtgGCACCACCAGCGGGTCCCTCAGGCCTGGAGCGCACGCATTCCAGCGGCCACCCAGACCATGCTCCGCCGCCTGGGCGCCCAAGCTGCAGTCGCCCTCTGTGTGCAGGCAGCAGCTGCCTGGCAACCCTCGAGCCCACTCGCGCTGCCAGCATCGCAGAACCAGGGCCAGGTGTCCCAGTGGCTGCGTCCAAGCCAGGCATTCTGCCCGGCGGCGGCGG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 225 224 - 8036 ggggcaggtgGCACCAACAGCGCGTCCCTCAGGCCTCGAGCGCACGCATTCCAGCGGCCACCCAGACCATGCTCCGCCGACTGGGCGCCCAAGCTGCAGTCGCCCTCTGTGTGCAGGCAGCAGCTGCCTGGCAACCCCCGAGCCCGCTCGCGCTGCCAGCATCGCAGAACCAGGGCCAGGTGTCCCAGTGGCTG-GGCCAAGCCAGGCATTCTGAC---CGGCGGCGG i gorGor5.CYUI01011323v1 C 0 C 0 e panPan2.chr4 366132 1493 - 195804263 I a score=20313.000000 s hg38.chr9_KI270719v1_random 170269 41 + 176845 CTGCACAGGAGCGAGAACTGAGAACCCGCCGCTCAACCCCA s panTro5.chr20 31554323 41 + 66533130 CTTCACAGGAGCGACAACTGAGAACCCGCCGCTCAACCTCA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 449 41 - 8036 CTGCACAGGAGCGAGAACTGAGAACCCGCCGCTCAACCCCA i gorGor5.CYUI01011323v1 C 0 C 0 s rhiBie1.NW_016805186v1 71756 41 - 3141155 CTGCACAAGGGCGAGAACTGAGAACCCGCCGCTCACCCCTA i rhiBie1.NW_016805186v1 N 0 I 1 e panPan2.chr4 366132 1493 - 195804263 I a score=3671.000000 s hg38.chr9_KI270719v1_random 170310 10 + 176845 CAC-GGGTGAC s panTro5.chr20 31554364 11 + 66533130 CACGGGGTGAC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 490 11 - 8036 CACGGGGTGAC i gorGor5.CYUI01011323v1 C 0 C 0 s papAnu3.chrUn_NW_003942091v1 259 10 - 11406 CTC-TGTTGGC i papAnu3.chrUn_NW_003942091v1 N 0 N 0 s rhiBie1.NW_016805186v1 71798 10 - 3141155 CCC-GGGTGAC i rhiBie1.NW_016805186v1 I 1 C 0 e panPan2.chr4 366132 1493 - 195804263 I a score=46510.000000 s hg38.chr9_KI270719v1_random 170320 97 + 176845 TGCCGAGTGCCCATACCAACGGCCCCGATCTCCCTCAGGTGGAGGACT-GGGCGGGAGGCACAGCCTGGGGGCCCTCAGGCTGGGCGCGCTGGCGATC s panTro5.chr20 31554375 97 + 66533130 TGCTGAGGGCCCATACCAATGGCCCCGATCTCCCTCAGGTGGAGGAGT-GGGCGGGAGGCACGGCCTGGGGGCCCTCAGGCTGGGCGCGCTGGCGATC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 501 97 - 8036 TGCTGAGGGCCCATACCAACAGCCCCGATCTCCCTCAGGTGGAGGACT-GGGCGGGAGGCACAGCCTGGGGGCCCTCAGGCTGGGCGCGCTGGCAATC i gorGor5.CYUI01011323v1 C 0 C 0 s rhiBie1.NW_016805186v1 71808 97 - 3141155 TGCCGAATGCCCATGCCAGCGGCCCCGATCTCCCTGCGGTGGAGGAGTGGGGCGGAAGGCACGGCCT-GGGGCACTCAGGCTGGGCGCGCTGGCGATC i rhiBie1.NW_016805186v1 C 0 C 0 e panPan2.chr4 366132 1493 - 195804263 I a score=33401.000000 s hg38.chr9_KI270719v1_random 170417 40 + 176845 CCGAGGCCGACCAGGCCATGCACCTCCAGCTCGCCTGGGC s panTro5.chr20 31554472 40 + 66533130 CCGAGGCCGACCAGGCCATGCACCTCCAGCCCATCTGGGC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 598 40 - 8036 CCGAGGCCGACCAGGCCATGCACCTCCAGCCCGCCTGGGC i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 107059747 40 - 135191526 CCGAGGCCGACCAGGCCATGCACCTCCAGCCCACCTGGGC i ponAbe2.chr9 N 0 C 0 s rhiBie1.NW_016805186v1 71905 40 - 3141155 CCGAGGCTGCCCAGACCATGCCTCTCCAGCACGCCTGGGC i rhiBie1.NW_016805186v1 C 0 I 475 e panPan2.chr4 366132 1493 - 195804263 I a score=10290.000000 s hg38.chr9_KI270719v1_random 170457 19 + 176845 ACCCAAGCTGCAGCCACCT s panTro5.chr20 31554512 19 + 66533130 ATCCAAGCTGCAGCCGCCT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 638 19 - 8036 ACCCAAGCTGCAGCCGCCT i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 107059787 19 - 135191526 ACCCAAGCTGCAGCCGCCT i ponAbe2.chr9 C 0 I 487 e panPan2.chr4 366132 1493 - 195804263 I e rhiBie1.NW_016805186v1 71945 475 - 3141155 I a score=1902.000000 s hg38.chr9_KI270719v1_random 170476 9 + 176845 TCTGTGTGC s panTro5.chr20 31554531 9 + 66533130 TCTGTGTGT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 657 9 - 8036 TCTTTGTGC i gorGor5.CYUI01011323v1 C 0 C 0 e panPan2.chr4 366132 1493 - 195804263 I e ponAbe2.chr9 107059806 487 - 135191526 I e rhiBie1.NW_016805186v1 71945 475 - 3141155 I a score=206434.000000 s hg38.chr9_KI270719v1_random 170485 408 + 176845 AGGCAGCAACCTCCAGGCAACTCCCGAGTCCGCCCTCACTTCCCACATCTCGGAACGAGGGCCAGATGTCCCTGTGGCTGCGGCCAAGCCAGGCGGTCTGCCCTGCAGCA-----GCTGCACGGGGGCGGGAACCGGCCCTCAGCCCTATCCCCCGTGGCTGCAGAGGGCCCTTGGCTAGAGGTGTCGAGCTCTGGCAGAGGAGGAGCCGGGCGGGGGCAGGGTCTGGCGGGCTCTCAGGCCAGGGGCACTCGCGATCCAGAGGCCGCCCAGGCCATGCTCCACCACCTGGGCGCCCAGCTACAGGCGCCAGGCAACTCCCAAGCTGGCTGGCGCGCCCAGCCTCGCAGACCTGGGCGTGGATGTCGCCGTGGCTGCGGCCAAGCCAGGCGGTCTGCCCGGCGGCGGCTGCAC s panTro5.chr20 31554540 413 + 66533130 AGGCAGCAGCTTCCAGGCAATTCCGGAGCCCGCCCTCACTCCCCACATCTCGGAACCAGGGCCAGATGTCCCTGTGGCTGCGGCCAAGCCAGGCGGCCTGCCCTGCTGCACggggggggggggggggggggAACCGGCCCTCAGCCCTATCCCCCGTGGCTGCAGAGGGCCCCTGGCTAGAGGTCTCGTGCTTTGGCAGAGGAGGAGCCGGGCGGGGGCAGGGTCTGGCGGGCTCTCGGGCCAGGGGCACTCGCGATCCAGAGGCCACCCAGGCCATGTTTCACTACCTGGGCGCCCAGCTACAGGCACCGGGCAACTCCCCAGCTGGCTGCCGCGCCCAGCCTCGCAGAACCGGGGCTAGGCGGCGAAGTGGCTGCGACCAAGCCAGGTGGTCTGCCCGGCGGCGGCTGCAC i panTro5.chr20 C 0 C 0 s panPan2.chr4 367625 407 - 195804263 AGGCAGCAGCCTCCAGGCAATTCCGGAGCCCGCCCTCACTCCCCACATCTCGGAACCAGGGCCAGATGTCCCTGTGGCTGCGGCCAAGCCAGGCGGCCTGCCCTGCTGCG-----GACGGGGGGGGGGGGGAACCGG-CCTCAGCCCTATCCCCCGTGGCTGCAGAGGGCCCCTGGCTAGAGGTCTCGTGCTTTGGCAGAGGAGCAGCCGGGCGGGGGCAGGGTCTGGCGGGCTCTCGGGCCAGGGGCACTCGCGATCCAGAGGCCACCCAGGCCATGTTTCACTACCTGGGCGCCCAGCTACAGGCACCGGGCAACTCCCAAGCTGGCTGCCGCGCCCAGCCTCGCAGAACCGGGGCTAGGCGGCGAAGTGGCTGCGACCAAGCCAGGTGGTCTGCCCGGCGGCGGCTGCAC i panPan2.chr4 I 1493 C 0 s gorGor5.CYUI01011323v1 666 407 - 8036 AGGCAGCAACCTCCAGGCAACTCCCGAGTCCGCCCTCACTTCCCACATCTCGGAACGAGGGCCAGATGT-CCTGTGGCTGCGGCCAAGCCAGGCGGTCTGCCCTGCAGCA-----GCTGCACGGGGGCGGGAACCGGCCCTCAGCCCTATCCCCCGTGGCTGCAGAGGGCCCTTGGCTAGAGGTGTCGAGCTCTGGCAGAGGAGGAGCCGGGCGGGGGCAGGGTCTGGCGGGCTCTCAGGCCAGGGGCACTCGCGATCCAGAGGCCGCCCAGGCCATGCTCCACCACCTGGGCGCCCAGCTACAGGCGCCAGGCAACTCCCAAGCTGGCTGGCGCGCCCAGCCTCGCAGACCCGGGCCTGGATGTCGCCGTGGCTGCGGCCAAGCCAGGCGGTCTGCCCGGCGGCGGCTGCAC i gorGor5.CYUI01011323v1 C 0 C 0 e ponAbe2.chr9 107059806 487 - 135191526 I e rhiBie1.NW_016805186v1 71945 475 - 3141155 I a score=34465.000000 s hg38.chr9_KI270719v1_random 170893 53 + 176845 CGGGGCAGGAACCGACCCTCAGCCCCATCC-------CCGGTGGCTGCGGACGGCCCCTG s panTro5.chr20 31554953 60 + 66533130 CGGGGAAGGAACCGACCCTCAGCCTGGCCCTGGACTGCAGGTGGCTGCAGACGGCCCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr4 368032 60 - 195804263 CGGGGAAGGAACCGACCCTCAGCCTGCCCCTGGACTGCAGGTGGCTGCAGACGGCCCCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 1073 53 - 8036 CGGGGCAGGAACCGACCGTCAGCCCCATCC-------CCGGTGGCTGCAGACGGCCCCTG i gorGor5.CYUI01011323v1 C 0 C 0 s rhiBie1.NW_016805186v1 72420 53 - 3141155 GGAGGCGGGAACCAGCCCTGAGCACCATCC-------CCGGTGGCTGCGGAGGGTCCCTG i rhiBie1.NW_016805186v1 I 475 I 2 e ponAbe2.chr9 107059806 487 - 135191526 I a score=600.000000 s hg38.chr9_KI270719v1_random 170946 1 + 176845 G s panTro5.chr20 31555013 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr4 368092 1 - 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 1126 1 - 8036 G i gorGor5.CYUI01011323v1 C 0 C 0 e ponAbe2.chr9 107059806 487 - 135191526 I e rhiBie1.NW_016805186v1 72473 2 - 3141155 I a score=15832.000000 s hg38.chr9_KI270719v1_random 170947 24 + 176845 AGAGGCCCCGACCTCTCTTCGGAG s panTro5.chr20 31555014 24 + 66533130 AGTGTCCCCGATCTCTCTTCGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 368093 21 - 195804263 AGCGTCCCCGATCTCTCTTC---G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 1127 24 - 8036 AGCGGCCCCGACCTCTCTTCCGAG i gorGor5.CYUI01011323v1 C 0 C 0 s rhiBie1.NW_016805186v1 72475 24 - 3141155 AGCGGCCCCGACCTCTCTTCGAAG i rhiBie1.NW_016805186v1 I 2 C 0 e ponAbe2.chr9 107059806 487 - 135191526 I a score=4365.000000 s hg38.chr9_KI270719v1_random 170971 3 + 176845 GAG s panTro5.chr20 31555038 3 + 66533130 GAG i panTro5.chr20 C 0 C 0 s panPan2.chr4 368114 3 - 195804263 GAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 1151 3 - 8036 GAG i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 107060293 3 - 135191526 GAG i ponAbe2.chr9 I 487 N 0 s rhiBie1.NW_016805186v1 72499 3 - 3141155 GAG i rhiBie1.NW_016805186v1 C 0 C 0 a score=76548.000000 s hg38.chr9_KI270719v1_random 170974 101 + 176845 AAGAGGGGCGGGAGTCAAGGACAGGCAGGCCCTCAGGCGGGAAGGGATGCGTGCCTGCGATTCCGGGACATACCGCGCCAGCCCAGGAGAACCCGGAAGCC s panTro5.chr20 31555041 101 + 66533130 AAGAGGGGCGGGAGTCACCGCCAGGCGGGCCCTCATGCGGGAAGGGATGCGCGCCTGGGATTCCGGGACGTCCAGCGCCAGCCCAGGAGAACCCGCAAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr4 368117 101 - 195804263 AAGAGGGGCGGGAGTCACGGCCAGGCGGGCCCTCAGGTGAGAAAGGATGCGCGCCTGGGATTCCGGGACGTCCAGCGCCAGCCCAGGAGAACCCGCAAGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 1154 101 - 8036 AAGAGGGGCGGGAGTCACGGCCAGGCAGGCCCTCAGGTGGGAAGGGATGCGCGCCTGCGATTCCGGGACGTACCGCGCCAGCCCAGGAGAACCCGGAAGCC i gorGor5.CYUI01011323v1 C 0 C 0 s rhiBie1.NW_016805186v1 72502 100 - 3141155 GAGCGGGGCGGGAGTCACGTCCGGGCGATGCCTCAGGCCGGAAGGGATGCGCGCCGGCGATTCCGGGACGTCCC-CGCGAGCCCAGGAGAACCCGCAAGCC i rhiBie1.NW_016805186v1 C 0 N 0 a score=10882.000000 s hg38.chr9_KI270719v1_random 171075 23 + 176845 CGCAGCGCCTGTttctctgtgtg s panTro5.chr20 31555142 23 + 66533130 AGAGGCGCCTGTttctctgtgtg i panTro5.chr20 C 0 C 0 s panPan2.chr4 368218 23 - 195804263 AGCGGCGCCTGTttctctgtgtg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 1255 23 - 8036 AGCAGCTCCTGTttctctgtgtg i gorGor5.CYUI01011323v1 C 0 C 0 a score=1569391.000000 s hg38.chr9_KI270719v1_random 171098 1845 + 176845 attctgtgaggaaccaccaaattgttttccacggcaagtgcatcattttctattcctagcagccagttcataagggctccaatttctccacctccttagcaacactgattttctgtgtcgttgttatgaaagccttactagtggatgcaaagtggcatctcatttgggttttgtcttgcattttattaatgaataacggtgtttagcatcttttcttgtccgtcttagacatttgtgtatcttcttcggagaaatgtctattcaagtcctttgcctattttttaattgggatgttagaaattctgacgttgagttgtgggatattaagcttttatcagatacgcactttgattttatcagatacatattttctcacatactatgggttgtcttttaactcccttgatagtatcctttgatgcataaaggttttttattttgattaaatctaatttacgtgtattttcttttgttatctgtgcttttctgtcatatttcaaaatacacttaaaactcaaaggtcataaaggtttaccttgtgttttcttctaagagttacata-ctttagtccttacatttaagtcttttattaatttagaattaatttttgtgtatactgcaaggtaggggtctaacttctctcttgtgcactgacatccagctgttggagagactgttctttcctcccttgactagacttggacagcttgttgaacagtcattgaccatatatgtgagcactaatttgtaggatctcaaatctgttctattttattggtctaaaagtctattagtcttatgccagtaccacactctcttgattactgtagatttgtagtaggctgtgaaactgaaaaatgtgagttttctaatattctttttcaagactgttttgtctgtcagatcctttgaatttttgtatgaattgtagaatgagtttctttctttctgcagaaatgcctttgggattttgatggtactgcattgaatctgtagattactttagatggtattgtcatcttaacaatattgtcttacaacccatgaacacagaatgtctttccagttatttccactctctttcgtttttttcagcaaagttttgtgtataccaccatggttagatttatgcctgaataacttattctttgatgctattataaatggaatttttaaaatgttttcatagttctttacaactatatagaaatatagctcatttgcctatgtttgttttgcatcctgcctcttttattagttataatcggttttgtgttttatttggagctttatacacataagatcatgtgtatatataattttacttctgtttttttatttctaatttagatgccttttatttctttgtcttgcctaattgctctggctaaaattgccagtggtatgttgaatacaagtggcaaatgaaccgtgcttgtcttgttctagatgttaggaaaacagctttcagtgtttcatcattgatcatgatattaactgttgggtttttgtacatcctattgtcatgttgcagaaaatcccttctatgcctagtttattgaatatttttattatagaagggtgttgtatttcatcaatgttttctctgcatcaattgaaataatcacgtgcttattcattttactgttagagtatattacactgattgattttttatatgttgagccactcttgcattttggggataaatctcacagggtgatagtttacaatcctttgattatacagtattgctgctagtattttgctagtattgctagtattttgctgagatttttgcttatatattcataagggatattgtgctgtagttctcttttttgt s panTro5.chr20 31555165 1838 + 66533130 attctgtgaggaaacaccaatctgttttccacggtaagtccatcattttctattcctagcagccagttcatgatgcctccagtttctccacctccttagcaacattgattttctgtgtcgttgttatgaaagccttactagtggatgcaaagtggcatctcatttgggttttgtcttgcattttattaatgaataacggtgtttagcatcttttcttgtccttcttagacatttgtgtatcttcttcggtgaaatgtctattcaagtcctttgcctatgttttaattgggatgttagaaattctcatgttgagttgtgggttattaagcttttatcagatacacactttgattttatcagatacatattttctcacatactatgggttgtcttttcactcccttgatagtatcctttgatgcataaagggtttttattttgattaaatctaatttacttgtattttcttttgttatctgtgcttttctgtcatatttcaaaatacacttaaaactcaaatgtcataacggtttaccgtgtgttctcttctaagagttacatatttttagtccttacatttaagtcttttattaatttagaattaatttttgtatatactgcaaggtaggggtctaacttctctcttgtgcactgacatccagctgttgaagagtccgtccttacctcccatgactagacttgaacaccttgttgaacagtcattgaccatatatgtgaggactaatttgtaggatctcaaatctgttctattgtattggtctaaaagtctattggtcttatgccagtaccacactctcttgattactgtagatttgtagtaggctgtgaaactgaaaattgtgagttttccaatatt-tttttcaagactgttttgtctgtcagatcctttgcatttttgtatgaattttagaatgag----tttgtttctgcaaaaatgcctttgggattttgatggtattgcattgcatctgtagattactttagatggtattgtcatcctaacaatattgtcttacaacccatgaacacagaatgtctttccagttatttccactctctttattttttttcagcaaagttttgtgtataccaccatggttagatttatgcctgaataacttattctttgatggtattataaatggaattttaaaaacattttcatagttctttacaactgtttagaaatatagctcatttgcctatgtttgttttgcatcctgcctcttttattagttataatcggttttgtgttttgtttggagcttcgtacacataagatcatgtatagatataattttacttcta-ttttttatttctaatttagatgccttttatttctttgtcttgcctaattgctctggctaaaattgccagtgctacgttgaatacaactggcaaatgcaccatccttgtcttgttctagatgttaggaaaacagctttcagtatttcatctttaatcacgatattaac--ttggttttttgtacatcccgttgtcatgttgcagaagatcccttctatgcctagtttattgagtatttttattatagaagggtgttgtatttcatcaatgttttctctgaatcaattgaaataatcacgttattattctttttactgttacagcatattacactgattgattttttatattttgagccacacttgcattttggggataaatctcacagggtgatagtttataatcctttgattatacagtattgctgttagtattttgctagtattgctagtattttgctgagatttttgcttatatattcataagggatattgtgctgtagttctcttttttgt i panTro5.chr20 C 0 C 0 s panPan2.chr4 368241 1836 - 195804263 attctgtgaggaaacagcaatctgttttccacggtaagtccatcattttctattcctagcagccagttcatgatgcctccagtttctccacctccttagcaacattgattttctgtgtcgttgttatgaaagccttactagtggatgcaaagtggcatctcatttgggttttgtcttgcattttattaatgaataacggtgtttagcatcttttcttgtccttcttagacatttgtgtatcttcttcggtgaaatgtctattcaagtcctttgcctatgttttaattgggatgttagaaattctcatgttgagttgtgggttattaagcttttatcagatatacactttgattttatcagatacatattttctcacatactatgggttgtcttttcactcccttgatagtatcctttgatgcataaagggtttttattttgattaaatctaatttacttgtattttcttttgttatctgtgcttttctgtcatatttcaaaatacacttaaaactc-aatgtcataacggtttaccgtgtgttctcttctaagagttacatatttttagtccttacatttaagtcttttattaatttagaattaatttttgtatatactgcaaggtagggttctaacttctctcttgtgcactgacatccagctgttgaagagtccgtccttatctcccatgactagacttgaacaccttgttgaacagtcattgaccttatatgtgaggactaatttgtaggatctcaaatctgttctattgtattggtctaaaagtctattggtcttatgccagtaccacactctcttgattactgtagatttgtagtaagctgtgaaactgaaaattgtgagttttccaatatt-tttttcaagactgttttgtctgtcagatcctttgcatttttgtatgaattttagaatgag----tttgtttctgcaaaaatgcctttgggattttgatggtattgcattgaatctgtagattactttagatggtattgtcatcctaacaatattgtcttacaacccatgaacacagaatgtctttccagttatttccactctcttta-tttttttcagcaaagttttgtgtataccaccatggttagatttatgcctgaataacttattctttgatggtattataaatggaatttttaaaacattttcatagttctttacaactgtttagaaatatagctcatttgcctatgtttgttttgcatcctgcctcttttattagttataatcggttttgtgttttgtttggagcttcgtacacataagatcatgtatagatataattttacttcta-ttttttatttctaatttagatgccttttatttctttgtcttgcctaattgctctggctaaaattgccagtgctacgttgaatacaactggcaaatgcaccatccttgtcttgttctagatgttaggaaaacagctttcagtatttcatctttaatcacgatattaac--ttggttttttgtacatcccgttgtcatgttgcagaagatcccttctatgcctagtttattgagtatttttattatagaagggtgttgtatttcatcaatgttttctctgaatcaattgaaataatcacgttattattcattttactgttacagcatattacactgattgattttttatattttgagccacacttgcattttggggataaatctcacagggtgatagtttataatcctttgattatacagtattgctgttagtattttgctagtattgctagtattttgctgagatttttgcttatatattcataagggatattgtgctgtagttctcttttttgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 1278 1841 - 8036 attctgtgaggaaccaccaaattgtttgccacggcaagtgcatcattttctattcctagcagccagttcatgagggctccaatttctccacctccttagcaacattgattttctgtgtcgttgttatgaaagccttactagtggatgcaaagtggcatctcatttgggttttgtcttgcattttattaatgaataacggtgtttagcatcttttcttgtccgtcttagacatttgtgtatcttcttcggagaaatgtctattcaagtcctttgcctattttttaattgggatgttagaaattctgatgttgagttgtgggatattaagcttttatcagatacacactttgattttatcagatacatattttctcacatactatgggttgtcttttaactcccttgatagtatcctttgatgcataaaggttttttattttgattaaatctaatttacgtgtattttcttttgttatctgtgcttttctgtcatatttcaaaatacacttaaaactcaaaggtcataaaggtttaccttgtgttttcttctaagagttacata-ctttagtccttacatttaagtcttttattaatttagaattaatttttgtgtatacagcaaggtaggggtctaacttctctcttgtgcactgacatccagctgttgaagagactgttctttcctcccttgactagacttggacagcttgttgaacagtcattgaccatatatgtgagcactaatttgtaggatctcaaatctgttctatt-tattggtctaaaagtttattagtcttatgccagtaccacactctcttgattactgtagatttgtagtaggctgtgaaactgaaaaatgtgagttttctaatattctttttcaagactgttttgtctgtcagatcctttgaatttttgtatgaattgtagaatgagtttctttctttctacagaaatgcctttgggattttgat-gtattgcattgaatctgtagattactttagatggtattgtcatcttaacaatattgtcttacaacccgtgaacacagaatgtctttccagttatttccactctctttcgtttttttcagcaaagttttgtgtataccaccatggttagatttatgcctgaataacttattctttgatgctattataaatggaatttttaaaatgttttcatagttctttacaactatatagaaatatagctcatttgcctatgtttgttttgcatcctgcctcttttattagttataatcggttttgtgttttatttggagctttatacacataagatcatgtgtagatataattttacttctg-ttttttatttctaatttagatgccttttatttctttgtcttgcctaattgctctggctaaaattgccagtgctacgttgaatacaagtggcaaatgcaccatgcttgtcttgttctagatgttaggaaaacagctttcagtgtttcatcattgatcatgatattaactgttgggtttttgtacatcctattgtcatgttgcagaaaatcccttctatgcctagtttattgagtatttttattatagaagggtgttgtatttcatcaatgttttctctgcatcaattgaaataatcacgtgcttattcattttactgttagagtatattacactgattgattttttatatgttgagccacccttgcattttggggataaatctcacagggtgatagtttacaatcctttgattatacagtattgctgctagtattttgctagtattgctagtattttgctgagatttttgc-tatatattcataagggatattgtgctgtagttctcttttttgt i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20486997 1844 + 135191526 attcTGtgaggaaccaccaaactgttttccacagcaagtgcagcattttctattcctagcagccagttcatgagggctccaatttctccacctccttagcaacattgatttcctgtgtcattgttatgaaagccttactagtggatgcaaagtggcatctcatttgggttttgtcttgcattttattaatgaataacggtgttaagcatcttttcttgtccttcttagacatttgtgtatcttctttggagaaatgtctattccagtcctttgcctatttttttattgagatgttagaaattctgttgttgaattgtgggatattaagcttttatcagatacacattttgattttatcagatacatattttctcacatagtatgggtagtctttttactcccttgatagtatcctttgatgcataaagagtttttattttgattaaatctaatttacgtgtattttcttttgttatctgtgcttttctgtcatatttcaaaatacacttaaaactcaaaggtcataaaggtttaccttgtgttttcttctaagagttacatatttttagtccttacatttaagtcttttattaatttataattaatttttgtatatactgcaaggtaggggtccaatttctttcttgtgcacttacattcagctgttgaagagactgttctttcctcccttgactagacttggccaccttgttgaacagtcattgaccatatatgtgaggactaatttgtagtatctcaaatctgttctgttctattggtctaaaagtctattggtcttatgccggtaccacattctcttgatgactgtagatttgtagtaggctgtgaaactgaaaaatgtgagttttccaatattctttttcaagattgttttgaatgtcagatcctttgaatttttgtatgaattttagaacgagtttctttgtttctgcaaaaatgccttcggaattttgatggtattgcattgaatctgtagattactttagatggtattgtcatcttaacaatattgtcttacaacctgtgaatgcagaatgtctttccagttatttccacactctttattttttttcagcaaagttttgtgtgtaccatgatggttagatttctgcctgaataacttattctttgatgctattataaatggaatttttaaaatgttttcatagttctttacaactttatggaaatatagctcatttgcctatgtttgttttgcatcctgcctcttttattagttataatcggttttgtgttttgtttggagctttatacacataagatcatgtgtggatataattttacttcta-ttttttatttctaatttagatgccttttatttctttgtcttgcctaattgctctggctagaactgccagtgctacattgaacacaagtggcaaatgcaccatccttgtcttgttccagatgttaggaaaacagctttcagtgtttcatcattgatcatgatattaactgttggttttttatacatcccattgtcatgttgcagaagttcccttccatgtgtagtttattgagtatttttattataaaagggtgttgtatttcatcaatgttttttctgcaccaatggaaataatcacctgcttattcattttcctgttacagtttattacactggttgattttttatatgttgagccgcccttgcattttggggataaatctcacagggtgatagtttacaat-atttgattatacagtattgctgctagtattttgttagtattgctagtattttgctgagatttttgcttatatattcataagggatattgtgctgtagttctcctttttgt i ponAbe2.chr9 N 0 C 0 a score=3575.000000 s hg38.chr9_KI270719v1_random 172943 6 + 176845 gctctc---- s panTro5.chr20 31557003 6 + 66533130 gctctc---- i panTro5.chr20 C 0 C 0 s panPan2.chr4 370077 6 - 195804263 gctctc---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 3119 6 - 8036 gctctc---- i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20488841 6 + 135191526 gctctc---- i ponAbe2.chr9 C 0 C 0 s papAnu3.chrUn_NW_003931466v1 11859 6 - 16463 ----tcattt i papAnu3.chrUn_NW_003931466v1 N 0 I 137 a score=127065.000000 s hg38.chr9_KI270719v1_random 172949 145 + 176845 tttggctttggtataaggataatgctgttatcaaaaaatgaattagcaagtattccttcttcatatattatgtcggaagagtttgagaagaaatggtattaattcttttttaaatgttaggttgactcaccagttaatgcagcta s panTro5.chr20 31557009 145 + 66533130 tttggctttggtacaaggataatgctgttatcaaaaaacgaattagcaagtattccttcttcatatattatgtcagaagagtttgagaagaaatggtattaattcttctttaaatattaggttgactcaccggttaatgcagcta i panTro5.chr20 C 0 C 0 s panPan2.chr4 370083 145 - 195804263 tttggctttggtacaaggataatgctgttatcaaaaaatgaattagcaagtattccttcttcatatattatgtcagaagagtttgagaagaaatggtattaattcttctttaaatattaggttgactcaccggttaatgcagcta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 3125 144 - 8036 tttggc-ttggtataaggataatgctgttatcaaaaaatgaattagcaagtattccttcttcatatattatgtcagaagagtttgagaagaaatggtattaattcttctttaaatgttaggttgactcaccagttaatgcagcta i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20488847 145 + 135191526 tttggctttggggtaaggataatgctgttatcaaaaaatgaattagcaagtattccttcttcatatattttgtcagaagagtttgagaagaaatggtattaattcttctttaaatgttaggttgactcaacagttaatgcagcta i ponAbe2.chr9 C 0 C 0 e papAnu3.chrUn_NW_003931466v1 11865 137 - 16463 I a score=16468.000000 s hg38.chr9_KI270719v1_random 173094 18 + 176845 tatggtcataaatgtttc s panTro5.chr20 31557154 18 + 66533130 tttggtcataaatgtttc i panTro5.chr20 C 0 C 0 s panPan2.chr4 370228 18 - 195804263 tttggtcataaatgtttc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 3269 18 - 8036 tttggtcataaatgtttc i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20488992 18 + 135191526 tttggtcataaacgtttc i ponAbe2.chr9 C 0 C 0 s papAnu3.chrUn_NW_003931466v1 12002 18 - 16463 CATGTGAATAGATTTTTN i papAnu3.chrUn_NW_003931466v1 I 137 N 0 a score=803098.000000 s hg38.chr9_KI270719v1_random 173112 949 + 176845 tttgttaatcgctttcgattactaattcaatatcctaggttataggtctattcatattttctctttcttctggagccactttcgtagtttgtatctttctagtgattcgtctatttcatccagggcagctaatttgttgttagacagttgttcacagtatactcctgtaatccttttgtatttctgtaaagttggtagtaatggctctgctttcatttattattttaataattagtcttccatcttttgctcagtcaatatagtgaaaggcttgatctttcaaataatctatgtttattcattctactgctctccaaacttctattttattgatttatgctctaattatgctctctattatttctttcatactgctagctttggatttagtcttcttttgtcttcttccactgcctttagatatagagtgaggatgttgatttgaga-tttttcttaaatgtagttgtttatatccatacattttcctttgaactctactttcactgcattcaataagttttggtatgttttgtttttattttaatttatctcaagatattttataattttgcttgtgatttatttttttcactcactggtagttgaagactgtattgtttaatttccacattttcatgaattttccagttttcacttatttatctgttgtttcttccattgtggttgtaaattatattttgtatgatttcaaacttttaaaaatgattaggatatattttgtggacgaagatatggcccatcctagag-aacttccatatacacttgaaaggaatgtatattctgctgttgttggatggactgtgctgtatatgcgtattagctctcagtggcttatactgttgtttaactcttgtatttctcatgaagcttctgtctggtttttctatccattaattaaaatgaggtattgaagtgtccaactgtgact s panTro5.chr20 31557172 948 + 66533130 tttgttaatcgctttcgattactaattcaatctcctaggttataggtctattcagattttctctttcttcttgagccactttggtagtttgtgtctttctagcgattcgtccatttcatccagggcacctaatttgttgttagacagttgttcacagtatactcctgtaatccttttgtatttctgtaaagttggtagtaatggctctgctttcatttattattttaataattagtcttccatctatttctcagtcaatatagtgaaaggcttgatctttcaaagaatctatgtttattcattctactgctctccaaccttctattttattgatttatgctctaattatgctctttattatttctttccttctgctagctttggatttagtctt-ttttgttttcttccactgcctttaggtatacagtgaggatactgatttgaga-tttttcttaaatgtagttgttcatatccatacattttcctttgaactctactttcactgcattcaataagttttggtatgttttgtttttattttaatttgtctcaagatattttataattttgcttgtgattta-ttttttcactcactggtagttgaagactgtattgtttaatttccacattttcatgaattttccagttttcacttatttagctgttgtttcttccattgtggttgtaaattatattttgtatgatttcaaacttttaaaaatgattaggacatattttgtggacgaagatatggcctatcctagagaaagtttcatatactcttgaaaagaatgtatattctgctgttgttggatggactgtcctgtatatgtgtattagccctcagtggcttctactgttgtttaagtcttgtatttctcatgaagcttctgtgtggtttttctatccattaattaaaatgaggtattgaagtgtccaactgtgact i panTro5.chr20 C 0 C 0 s panPan2.chr4 370246 948 - 195804263 tttgttaatcgctttcgattactaattcaatctcctaggttataggtctattcagattttctctttcttcttgagccactttggtagtttgtgtctttctagcgattcgtccgtttcatccagggcacctaatttgttgttagacagttgttcacagtatactcctgtaatccttttgtatttctgtaaagttggtagtaatggctctgctttcatttattattttaataattagtcttccatctttttctcagtcaatatagtgaaaggcttgatctttcaaagaatctacgtttattcattctactgctctccaaccttctattttattgatttatgctctaataatgctctttattatttctttccttctgctagctttggatttagtctt-ttttgttttcttccactgcctttaggtatacagtgaggatactgatttgaga-tttttcttaaatgtagttgttcatatccatacattttcctttgaactctactttcactgcattcaataagttttggtatgttttgtttttattttaatttgtctcaagatattttataattttgcttgtgattta-ttttttcactcactggtagttgaagactgtattgtttaatttccacattttcatgaattttccagttttcacttatttagctgttgtttcttccattgtggttgtaaattatattttgtatgatttcaaacttttaaaaatgattaggacatattttgtggacgaagatatggcctatcctagagaaagtttcatatacacttgaaaagaatgtatattctgctgttgttggatggactgtcctgtatatgtgtattagctctcagtggcttctactgttgtttaagtcttgtatttctcatgaagcttctgtgtggtttttctatccattaattaaaatgaggtattgaagtgtccaactgtgact i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 3287 939 - 8036 tttgttaatcactttcgattactaattcaatctcctaggttataagtctattcagattttctctttcttcttgagccactttggtagtttgtgtct---------ttcgtccatttcatccagggcagctaatttgttgttagacagttgttcacagtatactcctgtaatccttttgtatttctgtaaagttggtagtaatggctctgctttcatttattattttaataattagtcttccatcttttgctcagtcaatatagtgaaaggcttgatcattcaaataatctatgtttattcattctactgctctccaaacttctattttattgatttatgctctaattatactctctattatttctttcatactgctagctttgg-tttagtcttcttttgtcttcttccactgcctttaggtatagagtgaggatgttgatttgaga-tttttcttaaatgtagttgtttatatccatacattttcctttgaactctactttcactgcattcaataagttttggtatgttttgtttttattttaatttatctcaagatattttataattttgcttgtgatttatttttttcactcactggtagttgaagactgtattgtttaatttccacattttcgtgaattttccagttttcacttatttatctgttgtttcttccattgtgggtgtaaattatattttgtatgatttcaaacttttaaaaatgattaggacatattttgtggacgaagatatggcccatcctagag-aacttccatatacacttgaaaggaatgtatattctgctgttgttggatggactgtcctgtatatgcgtattagctctcagtggcttatactgttgtttaactcttgtatttctcatgaagcttctgtctggtttttctatccattaattaaaatgaggtattgaagtgtccaactgtgact i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20489010 934 + 135191526 tttgttaatcgctttcgagtactaattcaatctcctaggttataggtctattcagattttctctttctttttgagccactttggtagtttgtgtctttctagcgattcatccatttcatccagggcccctaattttttgttagacagttgttcacagtgtactcctgtaatccttttgcatttctgtgaagttggtagtaatggctctgctttcatttattgttttaaaaattagtcttccatgttttgctcagtcaatatagtgaaaggcttgatttttcaaagaatctgtg----ttcattctactgctctccaaccttctattttattgatttatgctctaattatgctgtttattatttctttccttctgctagctttgcattcagtctttttttgttttcttccactgcctttaggtatagagtgaggatattgatttgagattttttcttaaatgtagttgtttatatccatatattt----------tctactttcactgtattcaataagttttggtatgttttgtttttattttaatttgtctcaagatattttataatgttgcttgtgattta-tttcttcact--ctggtagttgaagactgtattgtttaatttccacatttttgtgaattttccagttttcacttatttatcttttgtttcttcccttgtggttgtaaattatattttgtatgatttcaaacttttaaaaattattaggacatattttgtggatgaagatatggcctatcctagagaaagttccatatacacttgaaaagaatgtatattctgctgttgttggatggactgtcctgtacatgtgtattagctctcagtggcttatactgttgtttaagtcttgtatttctcatgaagcttctgtctggtttttctatccattaattaaaatgagatattgaagtgtccaactgtgact i ponAbe2.chr9 C 0 C 0 a score=26452.000000 s hg38.chr9_KI270719v1_random 174061 30 + 176845 atagaactgtgggtttatcctttcaatcct s panTro5.chr20 31558120 30 + 66533130 atagaactctgggtttatcctttcaatcct i panTro5.chr20 C 0 C 0 s panPan2.chr4 371194 30 - 195804263 gtagaactctgggtttatcctttcaatcct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 4226 30 - 8036 atagaactgtgggtttatcctttcaatcct i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chrUn 5920783 30 + 72422247 atagaactgtgggtttatcctttcaatcct i ponAbe2.chrUn n 0 n 0 a score=44850.000000 s hg38.chr9_KI270719v1_random 174091 49 + 176845 gttaattAtttcagctttactgaggtgtaatagagaaataaaaattgta s panTro5.chr20 31558150 49 + 66533130 gttaattatttcagctttactgaggtgtaatagagaaataaaaattgta i panTro5.chr20 C 0 C 0 s panPan2.chr4 371224 49 - 195804263 gttaattatttcagctttactgaggtgtaatagagaaataaaaattgta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 4256 49 - 8036 gttaattatttcagctttactgaggtgtaatagagaaataaaaattgta i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20489944 49 + 135191526 gttaattctttcagctttactgaggtgtaatagagaaataaaaattgta i ponAbe2.chr9 C 0 C 0 a score=-1300.000000 s hg38.chr9_KI270719v1_random 174140 1 + 176845 -c s panTro5.chr20 31558199 1 + 66533130 -c i panTro5.chr20 C 0 C 0 s panPan2.chr4 371273 1 - 195804263 -c i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 4305 1 - 8036 -c i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20489993 1 + 135191526 -c i ponAbe2.chr9 C 0 C 0 s rhiRox1.KN295939v1 2008 1 - 15591 a- i rhiRox1.KN295939v1 N 0 C 0 a score=5096.000000 s hg38.chr9_KI270719v1_random 174141 2 + 176845 at s panTro5.chr20 31558200 2 + 66533130 at i panTro5.chr20 C 0 C 0 s panPan2.chr4 371274 2 - 195804263 at i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 4306 2 - 8036 at i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20489994 2 + 135191526 at i ponAbe2.chr9 C 0 C 0 s papAnu3.chrUn_NW_003931028v1 31812 2 - 135267 at i papAnu3.chrUn_NW_003931028v1 N 0 I 520 s rhiRox1.KN295939v1 2009 2 - 15591 at i rhiRox1.KN295939v1 C 0 N 0 s rhiBie1.NW_016832432v1 1043 2 - 1556 at i rhiBie1.NW_016832432v1 N 0 N 0 a score=433980.000000 s hg38.chr9_KI270719v1_random 174143 507 + 176845 gtgatgcgtttatatgcacattctgaaatgattaccaaaacgaagtcaatgaacatgttaattaactcacagaatagttacctttttgtgtgcatgtgtgggataagaaaacttaactctatcccctGTGACTGCAGAGTGGACATTCCGGCTGCTCCAGGCTCCAGCAGAGGAAGACTGGGGCAGGTGGCTCCACCAGGGAGGCCCTCAGGCCTGGCGCGCACGCATTCCAGAGGCCACCCAGACCACGCTCCGCCGCCTGGGCGCACAAGCTGCAGTCACCCTCCGTGTGCAGGCAGCAGCTGCCTGGCAACCCCTGAGCCCGCTTGTGCTCCCAGTCTCGCAGAACCAGGGCCAGGTATCCCTGTGGCTGTGGCCAAGCCAGGCATTCTGCCCAGCGGTGGCGGCTGCACAGGGGCGAGAACTGAGAACCCGCCGATCAACCCCACACGGGGTGACTGCCGAGTGCCCATGACAGCGGCCCCGATCTCTCTCAGGTGGAGGAGT s panTro5.chr20 31558202 505 + 66533130 gtgatgcgtttatatgcacattctgaaatgattaccaaaatgaagtcaattaacatgttaattacttcacagaatagttacctttttgtgtgcatgtgtgggataagaaaacttaactctatcccctGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCAGCAGAGGAAGACCGGGGCAGGTGGCACCACCAGGGGGGCCCTCAGGCCTGGAGCGCACGCATTCCATAGGCCACCCAGACCATGCTCCGCCGCCTGGGCGCCCAAGCTGCAGTCGCCCTCTGTGTGCAGGCAGCAGCTGCCTGGCAG--CCTGAGCCCGCTTGCGCTCCCAGCCTCGCAGAACCAGGGCCAGGTGTCCCAGTGGCTGCGGCCAAGCCAGGCATTCTGCCCGGCGGCGGCGGCTGCACAGGAGCGAGAACTGAGAACCTGCCGCTCAACCCCACATGGGGTGACTGCCGAGTGCCCATGGCAGCGGCCCCGATCTCCCACAGGTGGAGGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr4 371276 505 - 195804263 gtgatgcgtttatatgcacattctgaaatgattaccaaaatgaagtcaattaacatgttaattacttcacagaatagttacctttttgtgtgcatgtgtgggataagaaaacttaactctatcccctGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCAGCAGAGGAAGACCGGGGCAGGTGGCACCACCAGGGGGGCCCTCAGGCCTGGAGCGCAGGCATTCCATAGGCCACCCAGACCATGCTCCGCCGCCTGGGCGCCCAAGCTGCAGTCGCCCTCTGTGTGCAGGCAGCAGCTGCCTGGCAA--CCTGAGCCCGCTTGCGCTCCCAGCCTCGCAGAACCAGGGCCAGGTGTCCCAGTGGCTGCGGCCAAGCCAGGCATTCTGCCCGGCGGCGGCGGCTGCACAGGAGCGAGAACTGAGAACCTGCCGCTCAACCCCACATGGGGTGACTGCCGAGTGCCCATGGCAGCGGCCCCGATCTCCCTCAGGTGGAGGAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 4308 506 - 8036 gtgatgcgtttatatgcacattctgaaatgattaccaaaacgaagtcaatgaacatgttcattacctcacagaatagttacgtttttgtgtgcatgtgtgggataagaaaacttaaCTCT-TCCCCTGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCAGCAGAGGAAGACTGGGGCAGGTGGCACCACCAGGGAGGCCCTCAGGCCTGGCGCGCACGCACTCCAGAGGCCACCCAGACCATGCTCCGCCGCCTGGGCGCACAAGCTGCAGTCGCCCTCTGTGTGCAGGCAGCAGCTACCTGGCAACCCCTGAGCCCGCTTGCGCTCCCAGTCTCGCAGAACCAGGGCCAGGTGTCCCTGTGGCTGTGGCCAAGCCAGGCATTCTGCCTGGCGGTGGCGGCTGCACAGGGGCGAGAACTGAGAACCCGCTGCTCAACCCCACACGGGGTGACTGCCGAGTGCCCATGACAGCGGCCCCGATCGCTCTCAGGTGGAGGAGT i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20489996 503 + 135191526 gtgatgcgtttatatgcacattctgaaatgattactaaaatgaagtcaatgaacatgttaattacctcacagaatagttaactttttgtgtgcatttgtgggataagaaaacttaactctatcccctGTGACTGCAGAGTGGCCATTCCAGCTGCTCCAGGCTCCAGCAGAGGAAGATCGGGGCAGTTGACACCACCAGGGGGGCCCTCAGACATGGCACGCACGCATTCCAGAGGCCACCCATACCATGCTCTGCCTCCTGGCCGCCCAAGCTGCAGTCTCCCTCTGTGTGCAGGCAGCAGCTGCCTGGCAACCCCCGAGCCCGCTCGCACTCCCA-CCTCGCAGAACCAGGGCCAGGTGTACCAGTGGCTGTGGCCAAGCTAGGCATTCTGCC---CGGCGGCGGCTGCACAGGAGCGAGAACTGAGAACCCGCCACTCAGCCCCACACGGGGTGACTGCCGAGTGCCCATGGCAGCAGCCCCGATCTCCCTCAGGTGGAGGAGT i ponAbe2.chr9 C 0 C 0 e papAnu3.chrUn_NW_003931028v1 31814 520 - 135267 I a score=1500.000000 s hg38.chr9_KI270719v1_random 174650 1 + 176845 G s panTro5.chr20 31558707 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr4 371781 1 - 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01011323v1 4814 1 - 8036 G i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20490499 1 + 135191526 G i ponAbe2.chr9 C 0 C 0 s papAnu3.chrUn_NW_003931028v1 32334 1 - 135267 G i papAnu3.chrUn_NW_003931028v1 I 520 N 0 a score=1027141.000000 s hg38.chr9_KI270719v1_random 174651 1199 + 176845 GGTGGGAGGCATGGCCTGGGGGCCCTCAGGCTGGGCGCGCTGGCGATCCCGAGGCCGACCAGGCCATGCACCTCCAGCCCGCCTGGGCTCCCAAGCTGCAGCCGCCTTCTGTGTGCAGACAGCAGCCTCCAGGCAACTCCTGAGCGTGCCCGCTCTCCCCACATCTCCGAAGCAGGGCCAGATGTCCCTGTGGCTGCGGCCAAGCCAGGCGGTCTGCCCTGCAGCAGCTGCACGGGGGCGGGAAGCGGCCCTCAGCCCCATCCCCAGTGGCTGCAGAGGGCCCCTGGCTAGAGGTCTTGAGCTCTGGCAGAGGAGGAGCCGGGTAGGGGCAGGGTCTGGcttgaccatttggaattacaatacacttcactcatcaaccacagaacatacactggagtatcatctgcgtgcagatgagtatactgctcaaagcgatttacagattcaatgcttttcctatcaaactactaatgtcattttgcacaaaatagaaaacatctaaaatttatatggaacctaaaaggagtctgaatagccaagccaaagcaatactaaggctagagacataggctagagacatcatagtacatgacttcaaactatactagaagactatagtaatcaaaacaacatggtactggtagaaaaacagacacatagaccaatggaacagactagagtactagaaactaaggccacatgcctgcaaccatcacatctttaacaaagttgacaaaagtaagcaatgggaaaaa-gactttttatttaataaataatgtggggataactggctagtcatatgcagaagaataaaactcgacctccatatttcaccaaatacaaaaattagcttaagatggattaaagagttaaatgaaaaatctcaagctataaaacgcctagaaaaa-acctaggaaatactttttttgataacggccttgccaagtaatttatggctaagtcctcaaaagcaattgcaactaaaacaaaaaatgacaagtgggatttaattaaactgaaaaacttttgcacaacaagaggaactatcaaggtagtaaagagataacccacagaatgaaagaaaatattcacaaactacgcatctaacagaggtctattatgcagaacctataaggaacttaaacaaatcaacaagcaagcagcaag-taactccattaaaaagtgggcaacaggacatg s panTro5.chr20 31558708 1197 + 66533130 GGTGGGAGGCACGGCCTGGGGGCCCTCAGGCTGGGCGCGCTGGCGATCCCGAGGCCGACCAGGCCATGCACCTCCAGCCCGCCTGGGCTCCCGAGCTGCAGCCGCCTTGTGTGTGCAGGCAGCAGCCTCCAGGCAACTCCCGAGCTCGCCCGCACTCTCCACATCTCGGAAGCAGGGCCAGATGTCTCTGTGGCTGTGGCCAAGGCAGGCGGTCTGCCCTGCAGCTGCTGCACTGGGGCGGGAAGCGGCCCTCAGCCCCATCCCCGGTGGCTGCAGAGGGCCCCTGGCTAGAGGTATGGAGCTCTggcagaggaggagccgggcaggggcagggTCTGGCTTGACTATTTGGAATTACAATACACTTCACTCATCAACCTCAGAACATACACTGGAGTATCATCTGCGTGCagatgagtatactgctcaaagcgatttacagattcaatgcttttcctatcaaactactaacgtcatttttcacaaaatagaaaacatctaaaatttatatggaacctaaaaggagtctgaatagccaagccaaagcaatactaaggctagagacataggctagagacatcatattacatgacttcaaactatcctagaagactatagtaatcaaaacaacatggtactggtagaaaaacagacacgtagaccaatggaacagactagagtactagaaactaaggccacatgcctgcaaccatcacatctttaacaaagttgacaaaagtaagcaatgggaaaaacgactttttatttaataaataatgttgggataactggctagtcatatgcagaagaataaaactagatctccatatttcaccaaatacaaaaattagcttaagatggattaaagagttaaatgtaaaatctcaagttgtaaaacgcctagaaaaa-acctaggaaatacttttcctgataatggccttggcaaataatttatggctaagtcctcaaaagaaattgcaactaaaacaaaaattgacaagtgggatttaattaaactgaaaaacttttgc---acaagagaaactatcaaggtagtaaagggataacccacagaatgaaagaaaatattcacaaactacgcatctaacagaagtctatttttcagaacctataatgaacttacacaaatcaacaagcaaggagcaag-taactccattaaaaagtgggcaacaggacatg i panTro5.chr20 C 0 C 0 s panPan2.chr4 371782 1198 - 195804263 GGTGGGAGGCACGGCCTGGGGGCCCTCAGGCTGGGCGCGCTGGCGATCCCGAGGCCAACCAGGCCATGCACCTCCAGCCCGCCTGGGCTCCCGAGCTGCAGCCGCCTTGTGTGTGCAGGCAGCAGCCTCCAGGCAACTCCCGAGCTCGCCCGCACTCTCCACATCTCGGAAGCAGGGCCAGATGTCTCTGTGGCTGTGGCCAAGGCAGGCGGTCTGCCCTGCAGCTGCTGCACTGGGGCGGGAAGCGGCCCTCAGCCCCATCCCCGGTGGCTGCAGAGGGCCCCTGGCTAGAGGTATGGAGCTCTGGCAGAGGAGGAGCCGGGCAGGAGCAGGGTCTGGCTTGACTATTTGGAATTACAATACACTTCACTCATCAACCTCAGAACATACACTGGAGTATCATCTGCGTGCagatgagtatactgctcaaagcgatttacagattcaatgcttttcctatcaaactactaacgtcatttttcacaaaatagaaaacatctaaaatttatatggaacctaaaaggagtctgaatagccaagccaaagcaatactaaggctagagacataggctagagacatcatattacatgacttcaaactatcctagaagactatagtaatcaaaacaacatggtactggtagaaaaacagacacgtagaccaatggaacagactagagtactagaaactaaggccacatgcctgcaaccatcacatctttaacaaagttgacaaaagtaagcaatgggaaaaacgactttttatttaataaataatgttgggataactggctagtcatatgcagaagaataaaactagatctccatatttcaccaaatacaaaaattagcttaagatggattaaagagttaaatgtaaaatctcaagttgtaaaacgcctagaaaaa-acctaggaaatacttttcctgataatggccttggcaaataatttatggctaagtcctcaaaagaaattgcaactaaaacaaaaattgacaagtgggatttaattaaactgaaaaacttttgc---acaagagaaactatcaaggtagtaaagggataacacacagaatgaaagaaaatattcacaaactacgcatctaacagaagtctatttttcagaacctataatgaacttacacaaatcaacaagcaaggagcaagttaactccattaaaaagtgggcaacaggacatg i panPan2.chr4 C 0 N 0 s gorGor5.CYUI01011323v1 4815 1182 - 8036 GGTGGGAGGCACGGCCTGGGGGCCCTCAGGCTGGGCGCGCTGGCGATCCCGAGGCCGACCAGGCCATGCACCTCCAGCCCGCCTGGGCTCCCAAGCTGCAGCCGCCTTCTGTGTGCAGGCAGCAGCCTCCAGGCAACTCCTGAGCCTGCCCGCACTCCCCACATCTCGGAAGCAGGGCCAGATGTCCCTGTGGCTGCGGCCAAGCCAGGTGATTTGCCCTGCAGCAGCTGCACGGGGGCGGGAAGCGGCCCTCAGCCCCATCCCCAGTGGCTCTAGAGGCCCCCTGGGTAGAGGTGTCCAGCTCTGGCAGAGGAGGAGCCGGGTGGGGGCAGGGTCTGGcttgaccatttggaattacaatacacttcactcatcaaccacagaacatacactggagtatcatctgcgtgcagatgagtatactgctcaaagcgatttacagattcagtgcttttcctatcaaactactaatgtcattttgcacaaaatagaaaacatctaaaatttatatggaacctaaaaggagtctgaatagccaagccaaagcaatactaaggctagagacataggctagagacatcatattacatgacttcaaactatactagaagactatggtaatcaaaacaacatggtactggtagaaaaacagacacatagaccaatggaacagactagagtactagaaactaaggccacatgcctgcaaccatcacatctttaacaaagttgacaaaagtaagcaatgggaaaaa-gac--tttatttaataaataatgcggggataactggctagtcatatgcagaagaataaaactagacccccatatttcaccaaatacaaaaattagcttaagatggattaaagagttaaatgaaaaatctcaagctataaaacgcctagaaaaa-acctaggaaatacttttcttgataacggccttggcaaataatttatggctaagtcctcaaaagcaattgcaact---------------aagtgggatttaattaaactgaaaaacttttgcacaacaagagaaactatcaaggtagtaaagagataacccacagaatgaaagaaaatattcacaaactacgcatctaacagaggtctattatgcagaacctataaggaacttaaacaaatcaacaagcaagcagcaag-taactccattaaaaagtgggcaacaggacacg i gorGor5.CYUI01011323v1 C 0 C 0 s ponAbe2.chr9 20490500 1198 + 135191526 GTTGGCAGGCACGGCCTGGGGGCCCTCAGGCTGGGCACGCTGGCGATCCCGAGGCCGACCAGGCCATGCACCTCCAGCCCGCCTGGGCACCCAAGCTGCAGCCGCCTTCTGTGTGCAGGCAGCAGCCTCCAGGTAACTCCCGAGCCCGCCGACACTCCCCACACCTCGGAAACAGGACCAGATGTTCCTGTGGCTGCGGCCAAGCCAGGCGGTCTGCCCTGCAGCAGCTGCACGAGGGCAGGAAGCGGCCCTCTGTCCCATCTCTGGTGGCTGCAGAGGGCCCCTGACTAGAGGTCTCGAGCTCTGACAGAGGAGGAGCCAGGCGGGGGTAGGGTCCGGCTTGACCATTTGGAATTACAATACACTTCACCCATCAACCACAGAACATACAGTGGAGTATCATCTGTGTGCAGatgagtatactgctcaaagcgatttacagattcaatgcttttcctatcaaaccactaatgtcatttttcacaaaatagaaaacatttaaaatttttatggaacctaaaaggagtgtgaatagccaagccaaagcaatactaaagc--aagacataagctagagacatcatattacatgactttaaactataatagaagactatagtaatcaaaacaacatggtactgttagtaaaacagacacatagaccaatggaacagactagagtactagaaactaagtccacatgcctgcaaccatcacatctttaacaaagttgacaaaagtaagcaatgggaaaaa-gactttttatttaataaataatgcggggataactggctagtcatatgcagtagagtaaaactagacccccatatttcaccaaatacaaaaattagcttaagatggattaaagagttaaattgaaaatctcaagctataaaatgcctagaaaaatacctaggaaatacttttcttgataatggccttggcaaataatttatggcttagtcctcaaaagcaattgcaactaaaacaaaaattgacaagtgggatttaattaaactgaaaaacttttgcataacaagagaaactataaaagtagtaaagagataacccacagaatgaaagaaaatattcacaaactacacatctaacagaggtctattattcagaacctataaggaacttaaacaaatcaagaagcaagcagcaag-taactccattaaaaagtgggcaacagcacatg i ponAbe2.chr9 C 0 C 0 a score=499177.000000 s hg38.chr9_KI270719v1_random 175850 993 + 176845 aacggacacttttcaaaagaagacatacacacaagcacccaacaaacatatgtaaaagtgctcatcgtcattatttattagagaaatgcaaatcaaaaccaaaatgaaataccatttcacaccgttcagaatggc-tttttttgaaaagtcaaaagaaaaacacatattggtgaagatttagagaatagagaacacttatacactttctgaaggaatgtaaattagttcagtcactgtggaaagcaggttggggatttcttaaagaactgagaattgatctaccattcaatccagtaaccccattactgggtatatacccgaaagaaaataaatatcctatcaaaaagacacatgtagccatatttttatcacagcagtattcacaatcacaaagacataggcttaatccagacatccatcagtggtggtc----taaagactcatggaatactatacagccagaaaaaactcaaaattatgccatttgaagcaacatggatgcattgtttccagcaaactaatgcaaaagcaaaaaacaaaataccgcatgttctctttcataagtaggagctaaatgctgggtacacacggtcataatacagaggggtgggaggggccgggac-ggtggcttacgcctataatcccaacactttgggaggccaaggtgagcggatcacccgaggtcaggagtttgagaccagcctggccaacgtggtgaaaccccgcctctaatgaaaacacaaaaattaacggggcatggtggctggcgcctgtaatcccagctactcgggggtctgaggcggagagtcgcttgaacccggggggcggagtttgtagtgagccaagatcgcgccacatcactccagcctgggcgacggagcaaaactctgtctcaa------------aaacaaacaaacaaacaaa-aaacaa----agagggaggggggagggaatacagattgattaaaactaccgattggttagtgtcctctctaccttggtaatgaaT s panTro5.chr20 31559905 999 + 66533130 aacagacacttctcaaaagaagacatacacacaaacacccgactaacatatgtaaaagtgctcatcatcattatttattagagaaatgcaaatcaaaaccaaaaggaaataccatttcacaccagtcagaatggc-tttttttgaaaagtcaaaagaaaaacacatattggtgaagatttagagaatagagaacacttatacactttctgaaggaatgtaaattagttcagccactgtggaaagcaggttggggatttcttaaagaactgagagttgaactaccattcaacccagtaaccccattactgggtatatacccgaaagaaaataaatatcctaccaaaaagacacatgtagccatatttttatcacagcagtattcacaatcacaaagacatagacttaacccaggcgtccatcagtgatggtctggataaagactcatggaatactatacagccataaaaaacccaaaattatgccatttgaagcaacatggatgcattgtttccagcaaactaatgcaaaagcaaaaaacaaaataccacatgttctccttcataagtgggagctaaatgctgggtacacatggtcataatacagaggggtgggaggggccgggactggtggctcatgcctgtaatccca----tttgggaggccaaggtgagcggatcacccgaggtcaggagtttgagaccagcctggccaacgtggtgaaaccccgcctctaatgaaaacacaaaaattaactgggcatggtggctggcacctgtaatcccagctactcggggttctgaggcagagagtcgcttgaacccgtggggcagaggttgtagtgtgcccagatcgcgccacatcactccagcctgggcgacggagcaaaactctgtctcaa------------aaacaaacaaacaaacaaacaaacaaaagcagagggaggagggagggaatacagatttattaaaactaccgattggttagtgtcctctctaccttggtaatgaat i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01011323v1 5997 982 - 8036 aatggacacttttcaaaagaagacatacacacaagcacccaacaaacatatgtaaaagtgctcatagtcattatttattagagaaatgcaaatcaaaaccgaaatgaaataccatttcatactggtcagaatggc-cttttttgaaaagtcaaaagaaaaacacatatcagtgaagatttagagaatagagaacacttatacactttctgaaggaatgtaaattagttcagccactgtggaaagcaggttggggatttcttaaagaactgagagttgatctaccattcaatccagtaaccccattactgggtatatacccgaaa-aaaataaatatcctatcaaaaagacacatgtagctatatttttatcacagcagtattcacaatcacaaagacataggcttaatccagacatccatcagtggtggtctggataaagactcatggaatactatacagccagaaaaaactcaaaattatgccatttgaagcaacatggatgcattgtttccagcaaactaatgcaaaag---------------cgcatgttctctttcataagtgggagctaaatgctgggtacacatggtcataatacagaggggtgggagggtccgggactggtggctcacgcctataatcccaacactttgagaagccaaggtgagcggatcacccgaggtcaggagtttgagaccagcctggccaacgtggtgaaaccccgcctctaatgaaaacacaaaaattaactgggcatggtggctggcgcctgtaatcccagctactcgggggtctgaggcggagagtcgcttgaacccggggggcgggtgttgtagtgagccaagatcgcgccacatcactccagcctgggcgacggagcaaaactctgtctcaa------------aaacaaacaaacaaacaaa-aaacaa----agagggaggggggagggaatacagattgattaaaactaccgattggttagtgtcctctctaccttgctaatgaat i gorGor5.CYUI01011323v1 C 0 N 0 s ponAbe2.chr9 20491698 1002 + 135191526 aacagacacttctcaaaagaagacctacacacaagcacccaacaaacatatgtaaaagtgctcatcatcactatttattagagaaatgcaaatcaaaatcaaaatgaaataccatttcacaccagtcagaatggcttttttttgaaaagtcaaaagaaaaacacatatcagtgacgatttagagaatagagaacactcatacactttctgaaggaatgtaaattagttcagccactgtggaaagcaggtttggaatttcttaaacaactgagagttgaactaccattcaacccagtaaccccattactgggtatatatccgaaagaaaataaatat-ctaccaaaaagacacatgtagccatatttttatcacagcactattcaaaatcacaaagacatagacttaacccagtcgtccagcagtggtgatctggataaagactcatggaatactatacagccataa-------aaaattatgccatttgaagcaacatggatgcattgtttccagcaagctaatgcaaaagc-aaaaacaaaataccgcatgttctctctcataagtgggagctaaatgctgggtacagatggtcataattcagaggggcaggaggggccgggactggtggctcacgcctgtaatcccaacactttgggaggccaaggtgagcggatcacccgaggtcaggagtttgagaccagcttggccaatgtggtgaaaccccgcctctaatggaaacacaaaaattaactgggcatggtggctggcgcctgtaatcccagctactcgggggtctgaggcggagagttgcttgaatccggggggcggaggttgtagtgagccaagatcgcgccacatcactccagcctgggagacggagcaaaactctgtctcaaaaaccaacaaagaaaccaacaaacaaacaaa-aaacaa----agagggaggagggagggaatacagattgattaaaactatcgattggttagtgtcctctctaccttggtaatgaat i ponAbe2.chr9 C 0 C 0 a score=573.000000 s hg38.chr9_KI270719v1_random 176843 2 + 176845 TC s panTro5.chr20 31560904 2 + 66533130 tc i panTro5.chr20 C 0 N 0 s ponAbe2.chr9 20492700 2 + 135191526 tc i ponAbe2.chr9 C 0 N 0